Citrus Sinensis ID: 025755

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------25
Protein Sequence
MSGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKGFFFTTPSHSYMLERTLVLNQGVRLYRCKIQIPTL
Secondary Structure (PSIPRED)
cccccccEEEEEccccHHHHHHHHHHHHcccEEEEEccccccHHHHHHHHcccccccEEEEEEcccccccHHHHHccccEEEEcccccccccccccccccHHHHHHHHHHHHHHHHHcccEEEEEcccccEEEccccccccccccccccccHHHHHccccHHHHHHHHHHHHHHHHHHHccccEEEEcccccccccccccccccHHHHHHHHccccccccccEEEEEHHHHHHHHHHHHHHHHHcccc
Secondary Structure Prediction (SSPRO)
cccccccEEEEcccHHHHHHHHHHHHHHcccEEEEEEEccccccHHHHHHccccHHHcEEEEHcHcccccHHHHHcccccEEEEccccccccccccHHHHHHHHHHHHHHHHHHHHHccccEEEEEEcHHEEEccccccccccEcccccccHHHHHHcccEHHHHHHHHHHHHHHHHHHccccEEEEcccEEEcccccccccHHHHHHHHHHcccccccccccHEEHHHHHHHHHHHHHHHHHccccc
Coil and Loop (DISEMBL)
msgedkervcVTGAGGYIASWLVKYLLLKGymvhgtvrdpcdeknAHLKKLEGASENLQLFKTDLLDYEALCAATAgctgvfhvacpvpvgkvpnpevqlidpavvgtkNVLNSCVKAKVKRVVVVSSIGavmlnpnwpkgqvmdeecwsdeefCKATENYYCLAKTIAEIQALEYAkrgeldivtvcpsivigpmlqptintSSLLLLGFLKgfffttpshsymLERTLVLNQGVRLYRCKIQIPTL
Flexible Loop (DISEMBL)
msgedkervcvtgaggyIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLnscvkakvkRVVVVSSigavmlnpnwpkgQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKGFFFTTPSHSYMLERTLvlnqgvrlyrckiqiptl
Low Complexity Region (SEG)
MSGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCvkakvkrvvvvSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTINTSSllllgflkgfffTTPSHSYMLERTLVLNQGVRLYRCKIQIPTL
Disordered region (IsUnstruct)
********VCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKGFFFTTPSHSYMLERTLVLNQGVRLYRCKIQI***
Disordered Region (DISOPRED)
*****KE**CVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKGFFFTTPSHSYMLERTLVLNQGVRLYRCKIQIP**
Disordered Region (DISEMBL)
********VCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKGFFFTTPSHSYMLERTLVLNQGVRLYRCKIQIPTL
Disordered Region (DISPRO)
*****KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKGFFFTTPSHSYMLERTLVLNQGVRLYRCKIQIPT*
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKGFFFTTPSHSYMLERTLVLNQGVRLYRCKIQIPTL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	248	2.2.26 [Sep-21-2011]
Q9S9N9	344	Cinnamoyl-CoA reductase 1	no	no	0.810	0.584	0.567	4e-55
Q9SAH9	332	Cinnamoyl-CoA reductase 2	no	no	0.826	0.617	0.542	1e-54
Q500U8	326	Tetraketide alpha-pyrone	no	no	0.838	0.638	0.473	1e-46
Q9XES5	348	Bifunctional dihydroflavo	N/A	no	0.802	0.571	0.434	7e-39
Q84KP0	347	Bifunctional dihydroflavo	N/A	no	0.802	0.573	0.434	8e-39
P51110	337	Dihydroflavonol-4-reducta	no	no	0.842	0.620	0.414	1e-37
P51104	360	Dihydroflavonol-4-reducta	N/A	no	0.810	0.558	0.423	1e-37
Q9SEV0	340	Anthocyanidin reductase O	no	no	0.75	0.547	0.430	2e-35
P51105	366	Dihydroflavonol-4-reducta	N/A	no	0.850	0.576	0.401	4e-35
P14720	380	Dihydroflavonol-4-reducta	N/A	no	0.818	0.534	0.412	1e-34

>sp|Q9S9N9|CCR1_ARATH Cinnamoyl-CoA reductase 1 OS=Arabidopsis thaliana GN=CCR1 PE=1 SV=1

 Score =  214 bits (546), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 117/206 (56%), Positives = 144/206 (69%), Gaps = 5/206 (2%)

Query: 9   VCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDY 68
           VCVTGAGGYIASW+VK LL +GY V GTVR+P D KN HL++LEG  E L L K DL DY
Sbjct: 13  VCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDY 72

Query: 69  EALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSS 128
           EAL AA  GC GVFH A PV      +PE Q+++PAV G K V+N+  +AKVKRVV+ SS
Sbjct: 73  EALKAAIDGCDGVFHTASPV----TDDPE-QMVEPAVNGAKFVINAAAEAKVKRVVITSS 127

Query: 129 IGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKRGELDIVTVC 188
           IGAV ++PN     V+DE CWSD +FCK T+N+YC  K +AE  A E AK   +D+V + 
Sbjct: 128 IGAVYMDPNRDPEAVVDESCWSDLDFCKNTKNWYCYGKMVAEQAAWETAKEKGVDLVVLN 187

Query: 189 PSIVIGPMLQPTINTSSLLLLGFLKG 214
           P +V+GP LQPTIN S   +L +L G
Sbjct: 188 PVLVLGPPLQPTINASLYHVLKYLTG 213

Involved in the latter stages of lignin biosynthesis. Catalyzes one of the last steps of monolignol biosynthesis, the conversion of cinnamoyl-CoAs into their corresponding cinnamaldehydes.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 2EC: .EC: 1EC: .EC: 4EC: 4

>sp|Q9SAH9|CCR2_ARATH Cinnamoyl-CoA reductase 2 OS=Arabidopsis thaliana GN=CCR2 PE=1 SV=1

 Score =  213 bits (541), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 114/210 (54%), Positives = 144/210 (68%), Gaps = 5/210 (2%)

Query: 5   DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTD 64
           D + VCVTGAGGYIASW+VK LL +GY V GTVR+P D KN HL++L+GA E L L   D
Sbjct: 4   DGKLVCVTGAGGYIASWIVKLLLERGYTVRGTVRNPTDPKNNHLRELQGAKERLTLHSAD 63

Query: 65  LLDYEALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVV 124
           LLDYEALCA   GC GVFH A P+      +PE  +++PAV G K V+++  KAKVKRVV
Sbjct: 64  LLDYEALCATIDGCDGVFHTASPM----TDDPET-MLEPAVNGAKFVIDAAAKAKVKRVV 118

Query: 125 VVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKRGELDI 184
             SSIGAV +NPN     ++DE CWSD +FCK T+N+YC  K +AE  A E AK   +D+
Sbjct: 119 FTSSIGAVYMNPNRDTQAIVDENCWSDLDFCKNTKNWYCYGKMLAEQSAWETAKAKGVDL 178

Query: 185 VTVCPSIVIGPMLQPTINTSSLLLLGFLKG 214
           V + P +V+GP LQ  IN S + +L +L G
Sbjct: 179 VVLNPVLVLGPPLQSAINASLVHILKYLTG 208

Cinnamoyl-CoA reductase probably involved in the formation of phenolic compounds associated with the hypersensitive response. Seems not to be involved in lignin biosynthesis.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 4

EC: 4

>sp|Q500U8|TKPR1_ARATH Tetraketide alpha-pyrone reductase 1 OS=Arabidopsis thaliana GN=TKPR1 PE=2 SV=1

 Score =  186 bits (472), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 100/211 (47%), Positives = 138/211 (65%), Gaps = 3/211 (1%)

Query: 6   KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKN-AHLKKLEGASENLQLFKTD 64
           K +VCVTGA G++ASWLVK LLL+GY V GTVRDP +EK  AHL KLEGA E L+L K D
Sbjct: 5   KGKVCVTGASGFLASWLVKRLLLEGYEVIGTVRDPGNEKKLAHLWKLEGAKERLRLVKAD 64

Query: 65  LLDYEALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVK-AKVKRV 123
           L++  +   A  GC GVFH A PV +    NPE +++ PA+ GT NVL SC K   +KRV
Sbjct: 65  LMEEGSFDNAIMGCQGVFHTASPV-LKPTSNPEEEILRPAIEGTLNVLRSCRKNPSLKRV 123

Query: 124 VVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKRGELD 183
           V+ SS   V +  ++     +DE  W+  E CK  + +Y L+KT+AE  A ++++   +D
Sbjct: 124 VLTSSSSTVRIRDDFDPKIPLDESIWTSVELCKRFQVWYALSKTLAEQAAWKFSEENGID 183

Query: 184 IVTVCPSIVIGPMLQPTINTSSLLLLGFLKG 214
           +VTV PS ++GP L P + +++  +LG LKG
Sbjct: 184 LVTVLPSFLVGPSLPPDLCSTASDVLGLLKG 214

Involved in the biosynthesis of hydroxylated tetraketide compounds that serve as sporopollenin precursors (the main constituents of exine). Is essential for pollen wall development. Acts on tetraketide alpha-pyrones and reduces the carbonyl function on the tetraketide alkyl chain to a secondary alcohol function.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q9XES5|DFRA_MALDO Bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase OS=Malus domestica GN=DFR PE=1 SV=1

 Score =  160 bits (406), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 90/207 (43%), Positives = 126/207 (60%), Gaps = 8/207 (3%)

Query: 3   GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNA-HLKKLEGASENLQLF 61
           G + E VCVTGA G+I SWLV  LL  GY V  TVRDP ++K   HL  L  A  +L L+
Sbjct: 2   GSESESVCVTGASGFIGSWLVMRLLEHGYTVRATVRDPTNQKKVKHLLDLPKAETHLTLW 61

Query: 62  KTDLLDYEALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAK-V 120
           K DL D  +   A  GC+GVFHVA P+   +  +PE ++I P + G  ++L +C KAK V
Sbjct: 62  KADLADEGSFDEAIQGCSGVFHVATPMDF-ESKDPENEVIKPTINGLLDILKACQKAKTV 120

Query: 121 KRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKA---TENYYCLAKTIAEIQALEYA 177
           +++V  SS G V +  +  +  V DE  WSD EFC++   T   Y ++KT+AE  A +YA
Sbjct: 121 RKLVFTSSAGTVNVEEH--QKPVYDESNWSDVEFCRSVKMTGWMYFVSKTLAEQAAWKYA 178

Query: 178 KRGELDIVTVCPSIVIGPMLQPTINTS 204
           K   +D +T+ P++VIGP L P++  S
Sbjct: 179 KENNIDFITIIPTLVIGPFLMPSMPPS 205

Bifunctional enzyme involved in the flavonoid metabolism. May use dihydroquercetin, dihydrokaempferol, eriodictyol, garbanzol (5-deoxydihydrokaempferol), dihydrofisetin (5-deoxydihydroquercetin), naringenin to a low extent (10%), but not 5-deoxynaringenin or butin (5-deoxyeriodictyol) as substrate.

Malus domestica (taxid: 3750)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 3

EC: 4

>sp|Q84KP0|DFRA_PYRCO Bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase OS=Pyrus communis GN=DFR PE=1 SV=1

 Score =  160 bits (405), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 90/207 (43%), Positives = 126/207 (60%), Gaps = 8/207 (3%)

Query: 3   GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNA-HLKKLEGASENLQLF 61
           G + E VCVTGA G+I SWLV  LL  GY V  TVRDP ++K   HL  L  A  +L L+
Sbjct: 2   GSESESVCVTGASGFIGSWLVMRLLEHGYTVRATVRDPTNQKKVKHLLDLPKAETHLTLW 61

Query: 62  KTDLLDYEALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAK-V 120
           K DL D  +   A  GC+GVFHVA P+   +  +PE ++I P + G  ++L +C KAK V
Sbjct: 62  KADLADEGSFDEAIQGCSGVFHVATPMDF-ESRDPENEVIKPTINGLLDILKACQKAKTV 120

Query: 121 KRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKA---TENYYCLAKTIAEIQALEYA 177
           +++V  SS G V +  +  +  V DE  WSD EFC++   T   Y ++KT+AE  A +YA
Sbjct: 121 RKLVFTSSAGTVNVEEH--QKPVYDESNWSDVEFCRSVKMTGWMYFVSKTLAEQAAWKYA 178

Query: 178 KRGELDIVTVCPSIVIGPMLQPTINTS 204
           K   +D +T+ P++VIGP L P++  S
Sbjct: 179 KENNIDFITIIPTLVIGPFLMPSMPPS 205

Bifunctional enzyme involved in the flavonoid metabolism. May use dihydroquercetin, eriodictyol, garbanzol (5-deoxydihydrokaempferol), dihydrofisetin (5-deoxydihydroquercetin), dihydrokaempferol to a low extent (5%), but not naringenin, 5-deoxynaringenin or butin (5-deoxyeriodictyol) as substrate.

Pyrus communis (taxid: 23211)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 3

EC: 4

>sp|P51110|DFRA_VITVI Dihydroflavonol-4-reductase OS=Vitis vinifera GN=DFR PE=1 SV=1

 Score =  156 bits (394), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 90/217 (41%), Positives = 126/217 (58%), Gaps = 8/217 (3%)

Query: 3   GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCD-EKNAHLKKLEGASENLQLF 61
           G   E VCVTGA G+I SWLV  LL +   V  TVRDP + +K  HL  L  A  +L L+
Sbjct: 2   GSQSETVCVTGASGFIGSWLVMRLLERRLTVRATVRDPTNVKKVKHLLDLPKAETHLTLW 61

Query: 62  KTDLLDYEALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAK-V 120
           K DL D  +   A  GCTGVFHVA P+   +  +PE ++I P + G   ++ SC  AK V
Sbjct: 62  KADLADEGSFDEAIKGCTGVFHVATPMDF-ESKDPENEVIKPTIEGMLGIMKSCAAAKTV 120

Query: 121 KRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKA---TENYYCLAKTIAEIQALEYA 177
           +R+V  SS G V +  +  +  V DE CWSD EFC+A   T   Y ++KT+AE  A +YA
Sbjct: 121 RRLVFTSSAGTVNIQEH--QLPVYDESCWSDMEFCRAKKMTAWMYFVSKTLAEQAAWKYA 178

Query: 178 KRGELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKG 214
           K   +D +T+ P++V+GP +  ++  S +  L  + G
Sbjct: 179 KENNIDFITIIPTLVVGPFIMSSMPPSLITALSPITG 215

Vitis vinifera (taxid: 29760)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 1

EC: 9

>sp|P51104|DFRA_DIACA Dihydroflavonol-4-reductase OS=Dianthus caryophyllus GN=A PE=2 SV=1

 Score =  156 bits (394), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 88/208 (42%), Positives = 122/208 (58%), Gaps = 7/208 (3%)

Query: 7   ERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNA-HLKKLEGASENLQLFKTDL 65
           E VCVTGA G+I SWL+  LL +GY V  TVRDP + K   HL  L  A  NL L+K DL
Sbjct: 23  ETVCVTGASGFIGSWLIMRLLERGYTVRATVRDPDNTKKVQHLLDLPNAKTNLTLWKADL 82

Query: 66  LDYEALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVV 125
            +  +  AA  GCTGVFH+A P+   +  +PE ++I P + G  ++L SCVKAK++RVV 
Sbjct: 83  HEEGSFDAAVDGCTGVFHIATPMDF-ESKDPENEMIKPTINGMLDILKSCVKAKLRRVVF 141

Query: 126 VSSIGAVMLNPNWPKGQVMDEECWSDEEF---CKATENYYCLAKTIAEIQALEYAKRGEL 182
            SS G V  N    +  V DE CWS  +F    K T   Y ++K +AE  A +YA    L
Sbjct: 142 TSSGGTV--NVEATQKPVYDETCWSALDFIRSVKMTGWMYFVSKILAEQAAWKYAAENNL 199

Query: 183 DIVTVCPSIVIGPMLQPTINTSSLLLLG 210
           + +++ P +V+GP + P++  S +  L 
Sbjct: 200 EFISIIPPLVVGPFIMPSMPPSLITALS 227

Dianthus caryophyllus (taxid: 3570)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 1

EC: 9

>sp|Q9SEV0|BAN_ARATH Anthocyanidin reductase OS=Arabidopsis thaliana GN=BAN PE=1 SV=2

 Score =  149 bits (376), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 83/193 (43%), Positives = 124/193 (64%), Gaps = 7/193 (3%)

Query: 7   ERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKN-AHLKKLEGASENLQLFKTDL 65
           ++ CV G  G +AS L+K+LL  GY V+ TVRDP +EK  AHL+KL+    +L++FK DL
Sbjct: 11  KKACVIGGTGNLASILIKHLLQSGYKVNTTVRDPENEKKIAHLRKLQELG-DLKIFKADL 69

Query: 66  LDYEALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAK-VKRVV 124
            D ++  ++ +GC  +FHVA P+   K  +PE  +I PA+ G  NVL SC+K+K VKRV+
Sbjct: 70  TDEDSFESSFSGCEYIFHVATPINF-KSEDPEKDMIKPAIQGVINVLKSCLKSKSVKRVI 128

Query: 125 VVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENY---YCLAKTIAEIQALEYAKRGE 181
             SS  AV +N     G VM+EE W+D EF    + +   Y ++K +AE  A E+AK  +
Sbjct: 129 YTSSAAAVSINNLSGTGIVMNEENWTDVEFLTEEKPFNWGYPISKVLAEKTAWEFAKENK 188

Query: 182 LDIVTVCPSIVIG 194
           +++VTV P+++ G
Sbjct: 189 INLVTVIPALIAG 201

Involved in the biosynthesis of condensed tannins. Converts cyanidin into (-)-epicatechin as the major product.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 7

EC: 7

>sp|P51105|DFRA_GERHY Dihydroflavonol-4-reductase OS=Gerbera hybrida GN=DFR PE=2 SV=1

 Score =  148 bits (373), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 88/219 (40%), Positives = 125/219 (57%), Gaps = 8/219 (3%)

Query: 1   MSGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCD-EKNAHLKKLEGASENLQ 59
           M  +    VCVTGA G+I SWLV  LL +GY+VH TVRDP D +K  HL +L  A  NL+
Sbjct: 1   MEEDSPATVCVTGAAGFIGSWLVMRLLERGYVVHATVRDPGDLKKVKHLLELPKAQTNLK 60

Query: 60  LFKTDLLDYEALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAK 119
           L+K DL    +   A  GC GVFH+A P+   +  +PE ++I P + G  +++ SCVKAK
Sbjct: 61  LWKADLTQEGSFDEAIQGCHGVFHLATPMDF-ESKDPENEIIKPTIEGVLSIIRSCVKAK 119

Query: 120 -VKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFC---KATENYYCLAKTIAEIQALE 175
            VK++V  SS G V  N    +  V DE  WSD +F    K T   Y ++KT+AE  A +
Sbjct: 120 TVKKLVFTSSAGTV--NGQEKQLHVYDESHWSDLDFIYSKKMTAWMYFVSKTLAEKAAWD 177

Query: 176 YAKRGELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKG 214
             K   +  +++ P++V+GP +  T   S +  L  + G
Sbjct: 178 ATKGNNISFISIIPTLVVGPFITSTFPPSLVTALSLITG 216

Gerbera hybrida (taxid: 18101)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 1

EC: 9

>sp|P14720|DFRA_PETHY Dihydroflavonol-4-reductase OS=Petunia hybrida GN=DFRA PE=2 SV=2

 Score =  146 bits (369), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 87/211 (41%), Positives = 120/211 (56%), Gaps = 8/211 (3%)

Query: 9   VCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNA-HLKKLEGASENLQLFKTDLLD 67
           VCVTGA G+I SWLV  LL +GY VH TVRDP ++K   HL +L  A  NL L+K DL  
Sbjct: 18  VCVTGAAGFIGSWLVMRLLERGYNVHATVRDPENKKKVKHLLELPKADTNLTLWKADLTV 77

Query: 68  YEALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAK-VKRVVVV 126
             +   A  GC GVFHVA P+   +  +PE ++I P V G  +++ SC KA  VKR+V  
Sbjct: 78  EGSFDEAIQGCQGVFHVATPMDF-ESKDPENEVIKPTVRGMLSIIESCAKANTVKRLVFT 136

Query: 127 SSIGAVMLNPNWPKGQVMDEECWSDEEFC---KATENYYCLAKTIAEIQALEYAKRGELD 183
           SS G   L+    +    D+  WSD +F    K T   Y  +K +AE  A+E AK+  +D
Sbjct: 137 SSAGT--LDVQEQQKLFYDQTSWSDLDFIYAKKMTGWMYFASKILAEKAAMEEAKKKNID 194

Query: 184 IVTVCPSIVIGPMLQPTINTSSLLLLGFLKG 214
            +++ P +V+GP + PT   S +  L  + G
Sbjct: 195 FISIIPPLVVGPFITPTFPPSLITALSLITG 225

Petunia hybrida (taxid: 4102)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 1

EC: 9

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	248
225457656	323	PREDICTED: bifunctional dihydroflavonol	0.842	0.647	0.760	6e-81
224061831	321	predicted protein [Populus trichocarpa]	0.782	0.604	0.683	1e-75
225457658	318	PREDICTED: bifunctional dihydroflavonol	0.895	0.698	0.666	6e-75
359491872	312	PREDICTED: bifunctional dihydroflavonol	0.818	0.650	0.727	6e-75
25140436	221	cinnamoyl CoA reductase 2 [Solanum tuber	0.838	0.941	0.655	2e-74
224061829	319	predicted protein [Populus trichocarpa]	0.842	0.655	0.636	4e-74
225446901	322	PREDICTED: bifunctional dihydroflavonol	0.846	0.652	0.666	5e-73
359485168	320	PREDICTED: bifunctional dihydroflavonol	0.842	0.653	0.645	6e-73
359495058	323	PREDICTED: bifunctional dihydroflavonol	0.798	0.613	0.702	2e-72
326501188	324	predicted protein [Hordeum vulgare subsp	0.866	0.663	0.605	3e-72

>gi|225457656|ref|XP_002275531.1| PREDICTED: bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase isoform 1 [Vitis vinifera] gi|297745606|emb|CBI40771.3| unnamed protein product [Vitis vinifera]

 Score =  306 bits (783), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 159/209 (76%), Positives = 183/209 (87%)

Query: 5   DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTD 64
           +KERVCVTGAGGYIASW+VK+LL KGY+VHGTVRDP DEKN+HLKKLE A ENLQLFKTD
Sbjct: 6   EKERVCVTGAGGYIASWVVKFLLSKGYIVHGTVRDPSDEKNSHLKKLEKALENLQLFKTD 65

Query: 65  LLDYEALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVV 124
           LLDYE LCAA AGC+GVFHVA PVP+G + NPEV+LI+PAVVGT+NVL++C KAKVK+VV
Sbjct: 66  LLDYEGLCAAFAGCSGVFHVASPVPIGPISNPEVELIEPAVVGTRNVLSACEKAKVKKVV 125

Query: 125 VVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKRGELDI 184
           VVSS GAV + PN PK + MDEECWSD E+CKAT+NYYCLAKTIAE +ALE+ K+ EL+I
Sbjct: 126 VVSSAGAVAMTPNRPKDRPMDEECWSDLEYCKATQNYYCLAKTIAESEALEHTKKSELNI 185

Query: 185 VTVCPSIVIGPMLQPTINTSSLLLLGFLK 213
           VTVCPS V GPMLQ T+N S LLLL F+K
Sbjct: 186 VTVCPSFVFGPMLQSTMNGSCLLLLSFMK 214

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224061831|ref|XP_002300620.1| predicted protein [Populus trichocarpa] gi|222842346|gb|EEE79893.1| predicted protein [Populus trichocarpa]

 Score =  288 bits (737), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 134/196 (68%), Positives = 159/196 (81%), Gaps = 2/196 (1%)

Query: 9   VCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDY 68
           VCVTGAGGY+ASWLVK+LL +GY+VHGTVRDP +EKNAHL KLE A ENL+LFKTDLLDY
Sbjct: 6   VCVTGAGGYLASWLVKFLLSEGYVVHGTVRDPSNEKNAHLLKLENARENLKLFKTDLLDY 65

Query: 69  EALCAATAGCTGVFHVACPVPV--GKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVV 126
           E L  A +GC GVFHVACP+P     + NP+ ++++ AV GT+NVLN+C   KVK+V+ V
Sbjct: 66  EGLSTAISGCAGVFHVACPIPTDPASILNPKDKMLEAAVTGTRNVLNACSITKVKKVIAV 125

Query: 127 SSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKRGELDIVT 186
           SSI AVMLNPNWPK Q M+EE WSD EFCKA E +Y LAKT AE +ALEY K  EL IVT
Sbjct: 126 SSIAAVMLNPNWPKDQAMNEESWSDFEFCKANEQWYFLAKTKAEKEALEYGKTNELKIVT 185

Query: 187 VCPSIVIGPMLQPTIN 202
           +CPSI+IGP+LQPT+N
Sbjct: 186 ICPSIIIGPLLQPTMN 201

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225457658|ref|XP_002275562.1| PREDICTED: bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase [Vitis vinifera] gi|297745607|emb|CBI40772.3| unnamed protein product [Vitis vinifera]

 Score =  286 bits (732), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 148/222 (66%), Positives = 179/222 (80%)

Query: 5   DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTD 64
           +K RVCVTGAGGYIASW+VK LL KGY+VHGTVRDP DEKNAHLKKLE ASENL+LFK D
Sbjct: 3   EKGRVCVTGAGGYIASWVVKLLLSKGYIVHGTVRDPSDEKNAHLKKLEKASENLKLFKAD 62

Query: 65  LLDYEALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVV 124
           LL+Y ALC+A  GC GVFH A PVP   V NPEV+L++PAV GT NVL +C +AKVKRVV
Sbjct: 63  LLEYGALCSAFEGCDGVFHTASPVPPTTVANPEVELMEPAVKGTLNVLKACAEAKVKRVV 122

Query: 125 VVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKRGELDI 184
           VVSS  +V++NP WPKG+VMDE CWSD+E+C+AT+N+YCL+KT AE  A EYAK   LD+
Sbjct: 123 VVSSGASVIMNPRWPKGKVMDETCWSDKEYCRATKNWYCLSKTEAESVAFEYAKTSGLDV 182

Query: 185 VTVCPSIVIGPMLQPTINTSSLLLLGFLKGFFFTTPSHSYML 226
           VTVCP++V+GP+LQ TIN SSL+L+  LK  + T  +   M+
Sbjct: 183 VTVCPTLVLGPILQSTINASSLVLIKILKEGYETLENKFRMI 224

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359491872|ref|XP_003634335.1| PREDICTED: bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase isoform 2 [Vitis vinifera]

 Score =  286 bits (732), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 155/213 (72%), Positives = 176/213 (82%), Gaps = 10/213 (4%)

Query: 1   MSGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQL 60
           MS   KERVCVTGAGGYIASW+VK+LL KGY+VHGTVRDP DEKN+HLKKLE A ENLQL
Sbjct: 1   MSSPSKERVCVTGAGGYIASWVVKFLLSKGYIVHGTVRDPSDEKNSHLKKLEKALENLQL 60

Query: 61  FKTDLLDYEALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKV 120
           FKTDLLDYE LCAA AGC+GVFHVA PV          +LI+PAVVGT+NVL++C KAKV
Sbjct: 61  FKTDLLDYEGLCAAFAGCSGVFHVASPV----------ELIEPAVVGTRNVLSACEKAKV 110

Query: 121 KRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKRG 180
           K+VVVVSS GAV + PN PK + MDEECWSD E+CKAT+NYYCLAKTIAE +ALE+ K+ 
Sbjct: 111 KKVVVVSSAGAVAMTPNRPKDRPMDEECWSDLEYCKATQNYYCLAKTIAESEALEHTKKS 170

Query: 181 ELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLK 213
           EL+IVTVCPS V GPMLQ T+N S LLLL F+K
Sbjct: 171 ELNIVTVCPSFVFGPMLQSTMNGSCLLLLSFMK 203

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|25140436|gb|AAN71762.1| cinnamoyl CoA reductase 2 [Solanum tuberosum]

 Score =  285 bits (728), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 137/209 (65%), Positives = 162/209 (77%), Gaps = 1/209 (0%)

Query: 5   DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTD 64
           +K RVCVTGAGGY+AS LVK LL K Y+VHGTVRDP D+K AHLK L+ A+ENL+LFK D
Sbjct: 3   EKSRVCVTGAGGYVASSLVKLLLSKDYIVHGTVRDPSDDKYAHLKNLDKAAENLKLFKAD 62

Query: 65  LLDYEALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVV 124
           LLD  +L  A  GC GVFHVACPVP G VPNPEV+L++PAV GT NVL +C +  +KRVV
Sbjct: 63  LLDPNSLAGAIKGCNGVFHVACPVPSGSVPNPEVELVEPAVNGTLNVLKACSEENIKRVV 122

Query: 125 VVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKRGELDI 184
            VSS+ A    P+WPKGQV DE CWSD E+CKAT N+YC +KT+AE +A  YAK+G LD+
Sbjct: 123 FVSSVAAAS-RPHWPKGQVKDETCWSDSEYCKATNNWYCFSKTMAEKEAWSYAKQGGLDM 181

Query: 185 VTVCPSIVIGPMLQPTINTSSLLLLGFLK 213
           VTV PS+VIGPMLQ T N SSL L+  LK
Sbjct: 182 VTVLPSLVIGPMLQKTTNASSLFLIKLLK 210

Source: Solanum tuberosum

Species: Solanum tuberosum

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224061829|ref|XP_002300619.1| predicted protein [Populus trichocarpa] gi|222842345|gb|EEE79892.1| predicted protein [Populus trichocarpa]

 Score =  283 bits (724), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 133/209 (63%), Positives = 167/209 (79%)

Query: 5   DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTD 64
           +K RVCVTGAGG++ SWL+K LL K Y+VHGTVRDP DEK AH K ++ ASENL+LFK D
Sbjct: 4   EKGRVCVTGAGGFLGSWLLKVLLSKNYLVHGTVRDPADEKYAHWKTIDKASENLKLFKAD 63

Query: 65  LLDYEALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVV 124
           LLDY +LC+A  GC GVFHVA PVP   VPNPE +LI+PAV GT NVL +C +AKVKRVV
Sbjct: 64  LLDYNSLCSAIKGCEGVFHVASPVPSTTVPNPEAKLIEPAVKGTLNVLRACDEAKVKRVV 123

Query: 125 VVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKRGELDI 184
           +VSS+ AV +NP+ PKGQVMDE  WSD+E+C+AT+N+YCL+KT AE +A E AKR  LD+
Sbjct: 124 IVSSMVAVCMNPSLPKGQVMDENWWSDKEYCRATKNWYCLSKTEAESEAWECAKRSGLDV 183

Query: 185 VTVCPSIVIGPMLQPTINTSSLLLLGFLK 213
           VT+CPS+++GP+L   +N SS +L+  LK
Sbjct: 184 VTICPSLILGPILHSAVNASSKVLIKLLK 212

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225446901|ref|XP_002280095.1| PREDICTED: bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase [Vitis vinifera] gi|296086338|emb|CBI31779.3| unnamed protein product [Vitis vinifera]

 Score =  280 bits (715), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 140/210 (66%), Positives = 172/210 (81%)

Query: 4   EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKT 63
           E+KERVC+TGAGGYIASW+VK LL KG++VHGTVR+PCD KN+HLKKLE ASENL+LFK 
Sbjct: 5   EEKERVCITGAGGYIASWVVKLLLSKGFIVHGTVREPCDGKNSHLKKLEKASENLKLFKA 64

Query: 64  DLLDYEALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRV 123
           DLLDY+ LCAA  GCTGVFH+A P    KV NP+ ++++PAVVGT N+L +C  A+VK+V
Sbjct: 65  DLLDYDGLCAAIDGCTGVFHIASPNLYPKVSNPQAEVVEPAVVGTINILKACETARVKKV 124

Query: 124 VVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKRGELD 183
           VVVSS+ AV+LNP+WPK +  DEECWSD E CKA ENYY L+KT+AE +  ++A+  ELD
Sbjct: 125 VVVSSVAAVILNPSWPKDRPKDEECWSDPEICKAPENYYFLSKTLAESETWKHARTSELD 184

Query: 184 IVTVCPSIVIGPMLQPTINTSSLLLLGFLK 213
           I TVCPS V GPMLQPT+N SS +LL +LK
Sbjct: 185 IATVCPSFVFGPMLQPTLNASSYVLLTYLK 214

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359485168|ref|XP_002280010.2| PREDICTED: bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase-like [Vitis vinifera] gi|296086331|emb|CBI31772.3| unnamed protein product [Vitis vinifera]

 Score =  280 bits (715), Expect = 6e-73,   Method: Compositional matrix adjust.
 Identities = 135/209 (64%), Positives = 173/209 (82%)

Query: 5   DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTD 64
           +K+RVCVTGAGGY+ASW+VK LL KG++VHGTVR P DE+N+HLKKLE ASENL+LFK D
Sbjct: 3   EKKRVCVTGAGGYVASWVVKLLLSKGFIVHGTVRYPYDERNSHLKKLEKASENLKLFKAD 62

Query: 65  LLDYEALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVV 124
           L+D++ L AAT GCTGVFH+A PVP  KV NP++++++PAV+GT+N++ +C  AKVK++V
Sbjct: 63  LMDFQGLFAATDGCTGVFHIASPVPSAKVSNPQLEVVEPAVIGTRNIIKACEMAKVKKLV 122

Query: 125 VVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKRGELDI 184
           VVSS+ AV+LNP WPK +  DEECWSD EFCK  E  Y L+KT+AE +ALEYAK  E +I
Sbjct: 123 VVSSLAAVVLNPKWPKDRPKDEECWSDPEFCKTIEYPYFLSKTLAESEALEYAKTSEFNI 182

Query: 185 VTVCPSIVIGPMLQPTINTSSLLLLGFLK 213
           VTVCPS+V+GPMLQ T+N +S  LL +LK
Sbjct: 183 VTVCPSLVLGPMLQSTLNATSAFLLSYLK 211

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359495058|ref|XP_002267718.2| PREDICTED: bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase-like [Vitis vinifera] gi|296081291|emb|CBI17735.3| unnamed protein product [Vitis vinifera]

 Score =  278 bits (710), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 139/198 (70%), Positives = 170/198 (85%)

Query: 5   DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTD 64
           D+ERVCVTGAGGY+ASW+VK LL KG++VHGTVRDPCDEKN+H+KKLE ASENL+LFK D
Sbjct: 6   DEERVCVTGAGGYVASWVVKLLLSKGFIVHGTVRDPCDEKNSHMKKLEKASENLKLFKAD 65

Query: 65  LLDYEALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVV 124
           LL+ E+LCAA  GCTGVFHVA PVP  KV NPEV+L++PAV GT+NVL +C KAKVK+VV
Sbjct: 66  LLELESLCAAIDGCTGVFHVASPVPSAKVANPEVELLEPAVTGTRNVLKACEKAKVKKVV 125

Query: 125 VVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKRGELDI 184
           VVSS+ AV  NPNWP  +  DEECWSD EFC+  +++Y LAKT+AE +ALE+AK+ +L+I
Sbjct: 126 VVSSVAAVNRNPNWPMDRPKDEECWSDPEFCRTNQDFYSLAKTLAESEALEHAKKSDLNI 185

Query: 185 VTVCPSIVIGPMLQPTIN 202
           VT+CPS+VIGPMLQ T+N
Sbjct: 186 VTICPSMVIGPMLQSTLN 203

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|326501188|dbj|BAJ98825.1| predicted protein [Hordeum vulgare subsp. vulgare]

 Score =  277 bits (709), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 132/218 (60%), Positives = 165/218 (75%), Gaps = 3/218 (1%)

Query: 9   VCVTGAGGYIASWLVKYLLLK---GYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDL 65
           VCVTGAGG++ASWLVK LL     GY V GT RDP D KNAHLK LEGA E LQL + DL
Sbjct: 10  VCVTGAGGFVASWLVKLLLSDSKAGYTVRGTARDPGDAKNAHLKVLEGADERLQLVRADL 69

Query: 66  LDYEALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVV 125
           LDY+++ +A AGC GVFHVACPVP G+  +PE ++I PAV GT NVL +C +AKVKRVV+
Sbjct: 70  LDYDSVASAVAGCDGVFHVACPVPSGRSTDPEAEVIAPAVTGTLNVLKACHEAKVKRVVM 129

Query: 126 VSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKRGELDIV 185
           VSS  AV+ NPNWPKG+  DEE WSDE++C+   ++Y L+KT+AE +A  YA +  LDIV
Sbjct: 130 VSSGAAVVANPNWPKGKAFDEESWSDEDYCRKNGDWYYLSKTLAEREAFAYAAKTGLDIV 189

Query: 186 TVCPSIVIGPMLQPTINTSSLLLLGFLKGFFFTTPSHS 223
           T+CPS+VIGP++Q T+NTSS +LL +LKG   T  + S
Sbjct: 190 TICPSLVIGPLMQSTVNTSSKVLLNYLKGEHDTVENKS 227

Source: Hordeum vulgare subsp. vulgare

Species: Hordeum vulgare

Genus: Hordeum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	248
TAIR|locus:2051008	321	CRL1 "CCR(Cinnamoyl coA:NADP o	0.826	0.638	0.601	2.3e-64
TAIR|locus:2051018	321	CRL2 "CCR(Cinnamoyl coA:NADP o	0.826	0.638	0.577	1e-61
TAIR|locus:2011741	325	AT1G76470 [Arabidopsis thalian	0.806	0.615	0.576	3.4e-61
TAIR|locus:2200427	344	CCR1 "cinnamoyl coa reductase	0.770	0.555	0.545	5.8e-50
TAIR|locus:2025832	332	CCR2 "cinnamoyl coa reductase"	0.786	0.587	0.52	3.2e-49
TAIR|locus:2171258	324	AT5G58490 [Arabidopsis thalian	0.822	0.629	0.473	2e-47
TAIR|locus:2150315	326	AT5G19440 [Arabidopsis thalian	0.810	0.616	0.524	4.8e-46
TAIR|locus:2033904	325	AT1G51410 [Arabidopsis thalian	0.818	0.624	0.483	7.9e-46
TAIR|locus:2012315	322	AT1G09510 [Arabidopsis thalian	0.786	0.605	0.472	1.7e-43
TAIR|locus:2012265	322	AT1G09490 [Arabidopsis thalian	0.786	0.605	0.472	1.9e-42

TAIR|locus:2051008 CRL1 "CCR(Cinnamoyl coA:NADP oxidoreductase)-like 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 656 (236.0 bits), Expect = 2.3e-64, P = 2.3e-64
 Identities = 124/206 (60%), Positives = 152/206 (73%)

Query:     1 MSGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQL 60
             M+   K +VCVTGAGG++ SW+V  LL K Y VHGTVRDP +EK AHLKKLE A + L+L
Sbjct:     1 MADVHKGKVCVTGAGGFLGSWVVDLLLSKDYFVHGTVRDPDNEKYAHLKKLEKAGDKLKL 60

Query:    61 FKTDLLDYEALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCXXXXX 120
             FK DLLDY +L +A AGC+GVFHVACPVP   VPNPEV+LI PAV GT NVL +C     
Sbjct:    61 FKADLLDYGSLQSAIAGCSGVFHVACPVPPASVPNPEVELIAPAVDGTLNVLKACIEANV 120

Query:   121 XXXXXXSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKRG 180
                   SS+ A  +NP W K QV+DE CWSD+E+CK TEN+YCLAKT AE +A E+AKR 
Sbjct:   121 KRVVYVSSVAAAFMNPMWSKNQVLDEACWSDQEYCKKTENWYCLAKTRAESEAFEFAKRT 180

Query:   181 ELDIVTVCPSIVIGPMLQP-TINTSS 205
              L +V+VCP++V+GP+LQ  T+N SS
Sbjct:   181 GLHLVSVCPTLVLGPILQQNTVNASS 206

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0009809 "lignin biosynthetic process" evidence=ISS

GO:0016621 "cinnamoyl-CoA reductase activity" evidence=ISS

GO:0050662 "coenzyme binding" evidence=IEA

GO:0009408 "response to heat" evidence=IEP

GO:0009414 "response to water deprivation" evidence=IEP

GO:0009737 "response to abscisic acid stimulus" evidence=IEP

GO:0046686 "response to cadmium ion" evidence=IEP

TAIR|locus:2051018 CRL2 "CCR(Cinnamoyl coA:NADP oxidoreductase)-like 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 631 (227.2 bits), Expect = 1.0e-61, P = 1.0e-61
 Identities = 119/206 (57%), Positives = 152/206 (73%)

Query:     1 MSGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQL 60
             M+   K +VCVTGAGG++ SW+V +LL + Y VHGTVRDP +EK AHLKKL+ A + L+L
Sbjct:     1 MAVVQKGKVCVTGAGGFLGSWVVNHLLSRDYFVHGTVRDPGNEKYAHLKKLDKAGDKLKL 60

Query:    61 FKTDLLDYEALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCXXXXX 120
             FK DLL+Y +L +A AGC+GVFHVACPVP   VPNPEV LI PAV GT NVL +C     
Sbjct:    61 FKADLLNYGSLQSAIAGCSGVFHVACPVPSASVPNPEVDLIAPAVDGTLNVLKACVEAKV 120

Query:   121 XXXXXXSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKRG 180
                   SS+ AV +NP W K QV+DE  WSD+++CK TEN+Y L+KT AE +A E+AKR 
Sbjct:   121 KRVVYVSSVSAVAMNPMWSKSQVLDETAWSDQDYCKKTENWYSLSKTRAESEAFEFAKRT 180

Query:   181 ELDIVTVCPSIVIGPMLQP-TINTSS 205
              LD+V+VCP++V+GP+LQ  T+N SS
Sbjct:   181 GLDLVSVCPTLVLGPVLQQHTVNASS 206

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0009809 "lignin biosynthetic process" evidence=ISS

GO:0016621 "cinnamoyl-CoA reductase activity" evidence=ISS

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

TAIR|locus:2011741 AT1G76470 [Arabidopsis thaliana (taxid:3702)]

 Score = 626 (225.4 bits), Expect = 3.4e-61, P = 3.4e-61
 Identities = 117/203 (57%), Positives = 148/203 (72%)

Query:     6 KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDL 65
             K++VCVTGAGG+IASWLVK+LL +GY VHGTVRDPCDEKN HL+KL+ AS+NL+LFK DL
Sbjct:     4 KQKVCVTGAGGFIASWLVKFLLSRGYTVHGTVRDPCDEKNDHLRKLDNASKNLKLFKADL 63

Query:    66 LDYEALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCXXXXXXXXXX 125
              D E L +A  GC+GVFH+A PVP   VP  E +LI PA+ GTKNVL +C          
Sbjct:    64 FDDEGLFSAIDGCSGVFHIASPVPFEGVPLTEEELIKPALTGTKNVLEACTETKVQKVVV 123

Query:   126 XSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENY---YCLAKTIAEIQALEYAKRGEL 182
              SSI AV+ NP WP+    DE+CWSD ++  + E Y   Y LAKT+ E +ALE++KR   
Sbjct:   124 VSSIAAVVYNPKWPQDVAKDEDCWSDTQYLHSLEGYWRYYYLAKTLTEREALEWSKRNFA 183

Query:   183 DIVTVCPSIVIGPMLQPTINTSS 205
             D+VT+CPS++IGP LQ T+N+SS
Sbjct:   184 DVVTLCPSVIIGPRLQSTLNSSS 206

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0009809 "lignin biosynthetic process" evidence=ISS

GO:0016621 "cinnamoyl-CoA reductase activity" evidence=ISS

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

TAIR|locus:2200427 CCR1 "cinnamoyl coa reductase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 520 (188.1 bits), Expect = 5.8e-50, P = 5.8e-50
 Identities = 107/196 (54%), Positives = 130/196 (66%)

Query:     9 VCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDY 68
             VCVTGAGGYIASW+VK LL +GY V GTVR+P D KN HL++LEG  E L L K DL DY
Sbjct:    13 VCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDY 72

Query:    69 EALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCXXXXXXXXXXXSS 128
             EAL AA  GC GVFH A PV      +PE Q+++PAV G K V+N+            SS
Sbjct:    73 EALKAAIDGCDGVFHTASPV----TDDPE-QMVEPAVNGAKFVINAAAEAKVKRVVITSS 127

Query:   129 IGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKRGELDIVTVC 188
             IGAV ++PN     V+DE CWSD +FCK T+N+YC  K +AE  A E AK   +D+V + 
Sbjct:   128 IGAVYMDPNRDPEAVVDESCWSDLDFCKNTKNWYCYGKMVAEQAAWETAKEKGVDLVVLN 187

Query:   189 PSIVIGPMLQPTINTS 204
             P +V+GP LQPTIN S
Sbjct:   188 PVLVLGPPLQPTINAS 203

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0050662 "coenzyme binding" evidence=IEA

GO:0009809 "lignin biosynthetic process" evidence=IDA

GO:0016621 "cinnamoyl-CoA reductase activity" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0006623 "protein targeting to vacuole" evidence=RCA

GO:0007623 "circadian rhythm" evidence=IEP

GO:0009409 "response to cold" evidence=IEP

TAIR|locus:2025832 CCR2 "cinnamoyl coa reductase" [Arabidopsis thaliana (taxid:3702)]

 Score = 513 (185.6 bits), Expect = 3.2e-49, P = 3.2e-49
 Identities = 104/200 (52%), Positives = 129/200 (64%)

Query:     5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTD 64
             D + VCVTGAGGYIASW+VK LL +GY V GTVR+P D KN HL++L+GA E L L   D
Sbjct:     4 DGKLVCVTGAGGYIASWIVKLLLERGYTVRGTVRNPTDPKNNHLRELQGAKERLTLHSAD 63

Query:    65 LLDYEALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCXXXXXXXXX 124
             LLDYEALCA   GC GVFH A P+      +PE  L +PAV G K V+++          
Sbjct:    64 LLDYEALCATIDGCDGVFHTASPM----TDDPETML-EPAVNGAKFVIDAAAKAKVKRVV 118

Query:   125 XXSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKRGELDI 184
               SSIGAV +NPN     ++DE CWSD +FCK T+N+YC  K +AE  A E AK   +D+
Sbjct:   119 FTSSIGAVYMNPNRDTQAIVDENCWSDLDFCKNTKNWYCYGKMLAEQSAWETAKAKGVDL 178

Query:   185 VTVCPSIVIGPMLQPTINTS 204
             V + P +V+GP LQ  IN S
Sbjct:   179 VVLNPVLVLGPPLQSAINAS 198

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0009809 "lignin biosynthetic process" evidence=NAS

GO:0050662 "coenzyme binding" evidence=IEA

GO:0016621 "cinnamoyl-CoA reductase activity" evidence=IDA

GO:0010200 "response to chitin" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

GO:0007623 "circadian rhythm" evidence=IEP

GO:0009409 "response to cold" evidence=IEP

GO:0042754 "negative regulation of circadian rhythm" evidence=IMP

TAIR|locus:2171258 AT5G58490 [Arabidopsis thaliana (taxid:3702)]

 Score = 496 (179.7 bits), Expect = 2.0e-47, P = 2.0e-47
 Identities = 97/205 (47%), Positives = 135/205 (65%)

Query:     1 MSGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNA-HLKKLEGASENLQ 59
             M  +++E VCVTGA G I SWLV  LLL+GY VH TV++  DEK   HL+ LEGA+  L 
Sbjct:     1 MLTDEREVVCVTGASGCIGSWLVHQLLLRGYSVHATVKNLQDEKETKHLEGLEGAATRLH 60

Query:    60 LFKTDLLDYEALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCXXXX 119
             LF+ DLL Y+ + AA  GC+GVFH+A P  V +V +P+ QL+DPAV GT NVL +     
Sbjct:    61 LFEMDLLQYDTVSAAINGCSGVFHLASPCIVDEVQDPQKQLLDPAVKGTINVLTAAKEAS 120

Query:   120 XXXXXXXSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKR 179
                    SSI A+  +PNWP  ++ +EECW+ E++C+    +Y L+KT+AE  A E+A+ 
Sbjct:   121 VKRVVVTSSISAITPSPNWPADKIKNEECWAAEDYCRQNGLWYPLSKTLAEKAAWEFAEE 180

Query:   180 GELDIVTVCPSIVIGPMLQPTINTS 204
               LD+V V P  V+GP++ P++N S
Sbjct:   181 KGLDVVVVNPGTVMGPVIPPSLNAS 205

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0009809 "lignin biosynthetic process" evidence=ISS

GO:0016621 "cinnamoyl-CoA reductase activity" evidence=ISS

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0005829 "cytosol" evidence=IDA

GO:0019761 "glucosinolate biosynthetic process" evidence=RCA

TAIR|locus:2150315 AT5G19440 [Arabidopsis thaliana (taxid:3702)]

 Score = 483 (175.1 bits), Expect = 4.8e-46, P = 4.8e-46
 Identities = 109/208 (52%), Positives = 134/208 (64%)

Query:     2 SGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCD-EKNAHLKKLEGASENLQL 60
             SGE K  VCVTGA GYIASWLVK+LL +GY V  +VRDP D +K  HL  LEGA E L L
Sbjct:     4 SGEGKV-VCVTGASGYIASWLVKFLLSRGYTVKASVRDPSDPKKTQHLVSLEGAKERLHL 62

Query:    61 FKTDLLDYEALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCXXXXX 120
             FK DLL+  +  +A  GC GVFH A P       +P+ +LIDPAV GT NVLNSC     
Sbjct:    63 FKADLLEQGSFDSAIDGCHGVFHTASPF-FNDAKDPQAELIDPAVKGTLNVLNSCAKASS 121

Query:   121 XXXXX-XSSIGAVMLN--PNWPKGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYA 177
                    SS+ AV  N  P  P   V DE  +SD E C+A++ +Y L+KT+AE  A + A
Sbjct:   122 VKRVVVTSSMAAVGYNGKPRTPDVTV-DETWFSDPELCEASKMWYVLSKTLAEDAAWKLA 180

Query:   178 KRGELDIVTVCPSIVIGPMLQPTINTSS 205
             K   LDIVT+ P++VIGP+LQPT+NTS+
Sbjct:   181 KEKGLDIVTINPAMVIGPLLQPTLNTSA 208

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=ISS

GO:0005886 "plasma membrane" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0046482 "para-aminobenzoic acid metabolic process" evidence=RCA

TAIR|locus:2033904 AT1G51410 [Arabidopsis thaliana (taxid:3702)]

 Score = 481 (174.4 bits), Expect = 7.9e-46, P = 7.9e-46
 Identities = 101/209 (48%), Positives = 140/209 (66%)

Query:     1 MSGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCD-EKNAHLKKLEGASENLQ 59
             MS E+++ VCVTGA GYIASW+VK LLL+GY V  +VRDP D  K  HL  LEGA E L+
Sbjct:     1 MSSEEEKTVCVTGASGYIASWIVKLLLLRGYTVKASVRDPNDPRKTEHLLALEGAEERLK 60

Query:    60 LFKTDLLDYEALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCXXXX 119
             LFK +LL+  +  +A  GC GVFH A P     V +P+ +L+DPAV GT NVL+SC    
Sbjct:    61 LFKANLLEEGSFDSAIDGCEGVFHTASPF-YHDVKDPQAELLDPAVKGTINVLSSCLKTS 119

Query:   120 XXXXXX-XSSIGAVMLN--PNWPKGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEY 176
                     SSI AV  N  P  P+  ++DE  ++D ++C+A++ +Y L+KT+AE  A ++
Sbjct:   120 SVKRVVLTSSIAAVAFNGMPRTPE-TIVDETWFADPDYCRASKLWYVLSKTLAENAAWKF 178

Query:   177 AKRGELDIVTVCPSIVIGPMLQPTINTSS 205
             AK   L +V++ P++VIGP+LQPT+NTS+
Sbjct:   179 AKENNLQLVSINPAMVIGPLLQPTLNTSA 207

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=ISS

GO:0048610 "cellular process involved in reproduction" evidence=RCA

GO:0048868 "pollen tube development" evidence=RCA

TAIR|locus:2012315 AT1G09510 [Arabidopsis thaliana (taxid:3702)]

 Score = 459 (166.6 bits), Expect = 1.7e-43, P = 1.7e-43
 Identities = 94/199 (47%), Positives = 126/199 (63%)

Query:     9 VCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNA-HLKKLEGASENLQLFKTDLLD 67
             VCVTGA GY+ASW+VK LLL+GY V  TVRDP DEK   HL  L+GA E L+LFK DLL+
Sbjct:     8 VCVTGASGYVASWIVKLLLLRGYTVRATVRDPSDEKKTEHLLALDGAKEKLKLFKADLLE 67

Query:    68 YEALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCXXXXXXXXXX-X 126
               +   A  GC  VFH A PV +  V +P+++LIDPAV GT NVL +C            
Sbjct:    68 EGSFEQAIEGCDAVFHTASPVSL-TVTDPQIELIDPAVKGTLNVLKTCAKVSSVKRVIVT 126

Query:   127 SSIGAVMLN-PNWPKGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKRGELDIV 185
             SS+ AV+   P      ++DE C+SD  FC   + +Y L+KT+AE +A  +AK   LD+V
Sbjct:   127 SSMAAVLFREPTLGPNDLVDESCFSDPNFCTEKKLWYALSKTLAEDEAWRFAKEKGLDLV 186

Query:   186 TVCPSIVIGPMLQPTINTS 204
              + P +V+GP+L+P++  S
Sbjct:   187 VINPGLVLGPLLKPSLTFS 205

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0009809 "lignin biosynthetic process" evidence=ISS

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0045551 "cinnamyl-alcohol dehydrogenase activity" evidence=ISS

GO:0050662 "coenzyme binding" evidence=IEA

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=ISS

TAIR|locus:2012265 AT1G09490 [Arabidopsis thaliana (taxid:3702)]

 Score = 449 (163.1 bits), Expect = 1.9e-42, P = 1.9e-42
 Identities = 94/199 (47%), Positives = 127/199 (63%)

Query:     9 VCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNA-HLKKLEGASENLQLFKTDLLD 67
             VCVTGA GYIASW+VK LLL+GY V+ TVRDP D+K   HL  L+GA E L+LFK DLL+
Sbjct:     8 VCVTGASGYIASWIVKLLLLRGYTVNATVRDPKDKKKTEHLLALDGAKERLKLFKADLLE 67

Query:    68 YEALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCXXXXXXXXXXXS 127
               +   A  GC  VFH A PV +  V +P+ +LIDPA+ GT NVLN+C           +
Sbjct:    68 ESSFDQAIDGCDAVFHTASPV-LFTVTDPQTELIDPALKGTINVLNTCKQVSSVKRVILT 126

Query:   128 SIGAVMLNPNWPKG--QVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKRGELDIV 185
             S  A +L+   P G   ++DE  +SD   C+ T+N+Y L+K +AE  A ++AK   +D+V
Sbjct:   127 SSTAAVLSRQPPIGPNDLVDETFFSDPSLCRETKNWYSLSKILAENAAWQFAKDNGIDMV 186

Query:   186 TVCPSIVIGPMLQPTINTS 204
              + P  + GP+LQPT+N S
Sbjct:   187 VLNPGFICGPLLQPTLNMS 205

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0009809 "lignin biosynthetic process" evidence=ISS

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0045551 "cinnamyl-alcohol dehydrogenase activity" evidence=ISS

GO:0050662 "coenzyme binding" evidence=IEA

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.1.1	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	248
cd08958	293	cd08958, FR_SDR_e, flavonoid reductase (FR), exten	1e-112
PLN02662	322	PLN02662, PLN02662, cinnamyl-alcohol dehydrogenase	1e-79
PLN02214	342	PLN02214, PLN02214, cinnamoyl-CoA reductase	4e-74
PLN02986	322	PLN02986, PLN02986, cinnamyl-alcohol dehydrogenase	1e-61
PLN02989	325	PLN02989, PLN02989, cinnamyl-alcohol dehydrogenase	1e-60
cd05227	301	cd05227, AR_SDR_e, aldehyde reductase, extended (e	1e-56
PLN02650	351	PLN02650, PLN02650, dihydroflavonol-4-reductase	2e-52
PLN00198	338	PLN00198, PLN00198, anthocyanidin reductase; Provi	7e-52
cd05193	295	cd05193, AR_like_SDR_e, aldehyde reductase, flavon	1e-50
PLN02896	353	PLN02896, PLN02896, cinnamyl-alcohol dehydrogenase	4e-46
cd05228	318	cd05228, AR_FR_like_1_SDR_e, uncharacterized subgr	1e-35
PLN02583	297	PLN02583, PLN02583, cinnamoyl-CoA reductase	2e-31
COG0451	314	COG0451, WcaG, Nucleoside-diphosphate-sugar epimer	1e-30
PLN02686	367	PLN02686, PLN02686, cinnamoyl-CoA reductase	8e-26
TIGR03466	328	TIGR03466, HpnA, hopanoid-associated sugar epimera	2e-25
cd05241	331	cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid d	2e-17
pfam01370	233	pfam01370, Epimerase, NAD dependent epimerase/dehy	5e-17
pfam01073	280	pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydr	2e-16
cd08946	200	cd08946, SDR_e, extended (e) SDRs	8e-16
cd05243	203	cd05243, SDR_a5, atypical (a) SDRs, subgroup 5	2e-15
cd05232	303	cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase,	7e-14
cd05251	242	cd05251, NmrA_like_SDR_a, NmrA (a transcriptional	7e-13
pfam13460	182	pfam13460, NAD_binding_10, NADH(P)-binding	1e-12
cd05240	306	cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase	6e-12
cd05256	304	cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-e	6e-12
cd05234	305	cd05234, UDP_G4E_2_SDR_e, UDP-glucose 4 epimerase,	2e-11
cd05263	293	cd05263, MupV_like_SDR_e, Pseudomonas fluorescens	4e-11
cd09811	354	cd09811, 3b-HSD_HSDB1_like_SDR_e, human 3beta-HSD	8e-11
TIGR04180	297	TIGR04180, EDH_00030, NAD dependent epimerase/dehy	2e-10
cd05257	316	cd05257, Arna_like_SDR_e, Arna decarboxylase_like,	7e-10
cd05226	176	cd05226, SDR_e_a, Extended (e) and atypical (a) SD	7e-10
cd05269	272	cd05269, TMR_SDR_a, triphenylmethane reductase (TM	8e-10
cd05247	323	cd05247, UDP_G4E_1_SDR_e, UDP-glucose 4 epimerase,	1e-09
cd05260	316	cd05260, GDP_MD_SDR_e, GDP-mannose 4,6 dehydratase	1e-09
COG1087	329	COG1087, GalE, UDP-glucose 4-epimerase [Cell envel	1e-08
cd05252	336	cd05252, CDP_GD_SDR_e, CDP-D-glucose 4,6-dehydrata	2e-08
cd09812	339	cd09812, 3b-HSD_like_1_SDR_e, 3beta-hydroxysteroid	2e-08
cd05262	291	cd05262, SDR_a7, atypical (a) SDRs, subgroup 7	3e-08
pfam02719	280	pfam02719, Polysacc_synt_2, Polysaccharide biosynt	4e-08
cd05253	332	cd05253, UDP_GE_SDE_e, UDP glucuronic acid epimera	9e-08
cd05237	287	cd05237, UDP_invert_4-6DH_SDR_e, UDP-Glcnac (UDP-l	1e-07
cd05273	328	cd05273, GME-like_SDR_e, Arabidopsis thaliana GDP-	1e-07
cd05244	207	cd05244, BVR-B_like_SDR_a, biliverdin IX beta redu	2e-07
PLN02695	370	PLN02695, PLN02695, GDP-D-mannose-3',5'-epimerase	2e-07
COG0702	275	COG0702, COG0702, Predicted nucleoside-diphosphate	3e-07
cd09813	335	cd09813, 3b-HSD-NSDHL-like_SDR_e, human NSDHL (NAD	4e-07
PLN02240	352	PLN02240, PLN02240, UDP-glucose 4-epimerase	4e-07
cd05264	300	cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase	4e-07
cd05231	259	cd05231, NmrA_TMR_like_1_SDR_a, NmrA (a transcript	5e-07
TIGR01179	328	TIGR01179, galE, UDP-glucose-4-epimerase GalE	7e-07
cd05233	234	cd05233, SDR_c, classical (c) SDRs	1e-06
COG1086	588	COG1086, COG1086, Predicted nucleoside-diphosphate	2e-06
cd05246	315	cd05246, dTDP_GD_SDR_e, dTDP-D-glucose 4,6-dehydra	2e-06
cd05230	305	cd05230, UGD_SDR_e, UDP-glucuronate decarboxylase	3e-06
pfam07993	245	pfam07993, NAD_binding_4, Male sterility protein	4e-06
cd05245	293	cd05245, SDR_a2, atypical (a) SDRs, subgroup 2	6e-06
PRK05653	246	PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein)	8e-06
cd05235	290	cd05235, SDR_e1, extended (e) SDRs, subgroup 1	1e-05
TIGR04130	337	TIGR04130, FnlA, UDP-N-acetylglucosamine 4,6-dehyd	1e-05
COG1089	345	COG1089, Gmd, GDP-D-mannose dehydratase [Cell enve	2e-05
cd05374	248	cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxyster	2e-05
TIGR02622	349	TIGR02622, CDP_4_6_dhtase, CDP-glucose 4,6-dehydra	2e-05
cd05258	337	cd05258, CDP_TE_SDR_e, CDP-tyvelose 2-epimerase, e	2e-05
cd05238	305	cd05238, Gne_like_SDR_e, Escherichia coli Gne (a n	2e-05
COG3320	382	COG3320, COG3320, Putative dehydrogenase domain of	2e-05
PLN00141	251	PLN00141, PLN00141, Tic62-NAD(P)-related group II	4e-05
cd05271	273	cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ub	7e-05
pfam05368	232	pfam05368, NmrA, NmrA-like family	1e-04
cd05239	300	cd05239, GDP_FS_SDR_e, GDP-fucose synthetase, exte	4e-04
PRK05865	854	PRK05865, PRK05865, hypothetical protein; Provisio	8e-04
COG1028	251	COG1028, FabG, Dehydrogenases with different speci	0.001
cd05229	302	cd05229, SDR_a3, atypical (a) SDRs, subgroup 3	0.001
COG2910	211	COG2910, COG2910, Putative NADH-flavin reductase [	0.002
PLN02166	436	PLN02166, PLN02166, dTDP-glucose 4,6-dehydratase	0.004

>gnl|CDD|187661 cd08958, FR_SDR_e, flavonoid reductase (FR), extended (e) SDRs

 Score =  324 bits (833), Expect = e-112
 Identities = 124/208 (59%), Positives = 153/208 (73%), Gaps = 3/208 (1%)

Query: 9   VCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDE-KNAHLKKLEGASENLQLFKTDLLD 67
           VCVTGA G+I SWLVK LL +GY V  TVRDP DE K AHL +LEGA E L+LFK DLLD
Sbjct: 1   VCVTGASGFIGSWLVKRLLQRGYTVRATVRDPGDEKKVAHLLELEGAKERLKLFKADLLD 60

Query: 68  YEALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAK-VKRVVVV 126
           Y +  AA  GC GVFHVA PV      +PE ++I+PAV GT NVL +C KAK VKRVV  
Sbjct: 61  YGSFDAAIDGCDGVFHVASPVDFDSE-DPEEEMIEPAVKGTLNVLEACAKAKSVKRVVFT 119

Query: 127 SSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKRGELDIVT 186
           SS+ AV+ NPN  +G+V+DE CWSD +FCK T+ +Y L+KT+AE  A E+A+   LD+VT
Sbjct: 120 SSVAAVVWNPNRGEGKVVDESCWSDLDFCKKTKLWYALSKTLAEKAAWEFAEENGLDLVT 179

Query: 187 VCPSIVIGPMLQPTINTSSLLLLGFLKG 214
           V PS+V+GP LQP++N+SS L+L  LKG
Sbjct: 180 VNPSLVVGPFLQPSLNSSSQLILSLLKG 207

This subgroup contains FRs of the extended SDR-type and related proteins. These FRs act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites; they have the characteristic active site triad of the SDRs (though not the upstream active site Asn) and a NADP-binding motif that is very similar to the typical extended SDR motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|178268 PLN02662, PLN02662, cinnamyl-alcohol dehydrogenase family protein

 Score =  241 bits (618), Expect = 1e-79
 Identities = 117/227 (51%), Positives = 149/227 (65%), Gaps = 8/227 (3%)

Query: 2   SGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCD-EKNAHLKKLEGASENLQL 60
           SGE K  VCVTGA GYIASWLVK LL +GY V  TVRDP D +K  HL  L+GA E L L
Sbjct: 1   SGEGKV-VCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLALDGAKERLHL 59

Query: 61  FKTDLLDYEALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAK- 119
           FK +LL+  +  +   GC GVFH A P     V +P+ +LIDPAV GT NVL SC K   
Sbjct: 60  FKANLLEEGSFDSVVDGCEGVFHTASPF-YHDVTDPQAELIDPAVKGTLNVLRSCAKVPS 118

Query: 120 VKRVVVVSSIGAVMLN--PNWPKGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYA 177
           VKRVVV SS+ AV  N  P  P   V+DE  +SD  FC+ ++ +Y L+KT+AE  A ++A
Sbjct: 119 VKRVVVTSSMAAVAYNGKPLTP-DVVVDETWFSDPAFCEESKLWYVLSKTLAEEAAWKFA 177

Query: 178 KRGELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKGFFFTTPSHSY 224
           K   +D+VT+ P++VIGP+LQPT+NTS+  +L  + G   T P+ SY
Sbjct: 178 KENGIDMVTINPAMVIGPLLQPTLNTSAEAILNLING-AQTFPNASY 223

Length = 322

>gnl|CDD|177862 PLN02214, PLN02214, cinnamoyl-CoA reductase

 Score =  228 bits (582), Expect = 4e-74
 Identities = 117/206 (56%), Positives = 144/206 (69%), Gaps = 5/206 (2%)

Query: 9   VCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDY 68
           VCVTGAGGYIASW+VK LL +GY V GTVR+P D KN HL++LEG  E L L K DL DY
Sbjct: 13  VCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDY 72

Query: 69  EALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSS 128
           EAL AA  GC GVFH A PV      +PE Q+++PAV G K V+N+  +AKVKRVV+ SS
Sbjct: 73  EALKAAIDGCDGVFHTASPV----TDDPE-QMVEPAVNGAKFVINAAAEAKVKRVVITSS 127

Query: 129 IGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKRGELDIVTVC 188
           IGAV ++PN     V+DE CWSD +FCK T+N+YC  K +AE  A E AK   +D+V + 
Sbjct: 128 IGAVYMDPNRDPEAVVDESCWSDLDFCKNTKNWYCYGKMVAEQAAWETAKEKGVDLVVLN 187

Query: 189 PSIVIGPMLQPTINTSSLLLLGFLKG 214
           P +V+GP LQPTIN S   +L +L G
Sbjct: 188 PVLVLGPPLQPTINASLYHVLKYLTG 213

Length = 342

>gnl|CDD|178567 PLN02986, PLN02986, cinnamyl-alcohol dehydrogenase family protein

 Score =  196 bits (498), Expect = 1e-61
 Identities = 102/209 (48%), Positives = 135/209 (64%), Gaps = 4/209 (1%)

Query: 9   VCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCD-EKNAHLKKLEGASENLQLFKTDLLD 67
           VCVTGA GYIASW+VK LLL+GY V  TVRD  D +K  HL  L+GA E L+LFK DLL+
Sbjct: 8   VCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLE 67

Query: 68  YEALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVK-AKVKRVVVV 126
             +   A  GC  VFH A PV    V +P+ +LIDPA+ GT NVLN+C +   VKRV++ 
Sbjct: 68  ESSFEQAIEGCDAVFHTASPV-FFTVKDPQTELIDPALKGTINVLNTCKETPSVKRVILT 126

Query: 127 SSIGAVML-NPNWPKGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKRGELDIV 185
           SS  AV+   P      V+DE  +SD   C+ T+N+Y L+K +AE  A E+AK   +D+V
Sbjct: 127 SSTAAVLFRQPPIEANDVVDETFFSDPSLCRETKNWYPLSKILAENAAWEFAKDNGIDMV 186

Query: 186 TVCPSIVIGPMLQPTINTSSLLLLGFLKG 214
            + P  + GP+LQPT+N S  L++ F+ G
Sbjct: 187 VLNPGFICGPLLQPTLNFSVELIVDFING 215

Length = 322

>gnl|CDD|178569 PLN02989, PLN02989, cinnamyl-alcohol dehydrogenase family protein

 Score =  193 bits (491), Expect = 1e-60
 Identities = 105/232 (45%), Positives = 147/232 (63%), Gaps = 12/232 (5%)

Query: 9   VCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNA-HLKKLEGASENLQLFKTDLLD 67
           VCVTGA GYIASW+VK LL +GY ++ TVRDP D K   HL  L+GA E L+LFK DLLD
Sbjct: 8   VCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLD 67

Query: 68  YEALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVK-AKVKRVVVV 126
             +   A  GC  VFH A PV +    +P+V+LI+PAV GT NVL +C K + VKRV++ 
Sbjct: 68  EGSFELAIDGCETVFHTASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILT 127

Query: 127 SSIGAVM-----LNPNWPKGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKRGE 181
           SS+ AV+     L PN     V+DE  +++  F +  + +Y L+KT+AE  A  +AK  E
Sbjct: 128 SSMAAVLAPETKLGPN----DVVDETFFTNPSFAEERKQWYVLSKTLAEDAAWRFAKDNE 183

Query: 182 LDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKGFF-FTTPSHSYMLERTLVL 232
           +D++ + P +V GP+LQPT+N S  +++  +KG   F T  H ++  R + L
Sbjct: 184 IDLIVLNPGLVTGPILQPTLNFSVAVIVELMKGKNPFNTTHHRFVDVRDVAL 235

Length = 325

>gnl|CDD|187538 cd05227, AR_SDR_e, aldehyde reductase, extended (e) SDRs

 Score =  182 bits (465), Expect = 1e-56
 Identities = 85/216 (39%), Positives = 113/216 (52%), Gaps = 12/216 (5%)

Query: 8   RVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKL---EGASENLQLFKTD 64
            V VTGA G+IAS +V+ LL  GY V GTVR     K+A LK L    G ++ L+    D
Sbjct: 1   LVLVTGATGFIASHIVEQLLKAGYKVRGTVRSL--SKSAKLKALLKAAGYNDRLEFVIVD 58

Query: 65  LL-DYEALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAK-VKR 122
            L    A   A  G   V HVA P P    P+ E  +IDPAV GT NVL +   A  VKR
Sbjct: 59  DLTAPNAWDEALKGVDYVIHVASPFPF-TGPDAEDDVIDPAVEGTLNVLEAAKAAGSVKR 117

Query: 123 VVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCK-ATENYYCLAKTIAEIQALEYAKR-- 179
           VV+ SS+ AV        G+V  EE W+D    K    + Y  +KT+AE  A E+ K   
Sbjct: 118 VVLTSSVAAVGDPTAEDPGKVFTEEDWNDLTISKSNGLDAYIASKTLAEKAAWEFVKENK 177

Query: 180 GELDIVTVCPSIVIGPMLQPT-INTSSLLLLGFLKG 214
            + +++T+ P  V+GP L    +N+S+ L+   L G
Sbjct: 178 PKFELITINPGYVLGPSLLADELNSSNELINKLLDG 213

This subgroup contains aldehyde reductase of the extended SDR-type and related proteins. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 301

>gnl|CDD|178256 PLN02650, PLN02650, dihydroflavonol-4-reductase

 Score =  173 bits (440), Expect = 2e-52
 Identities = 93/217 (42%), Positives = 129/217 (59%), Gaps = 8/217 (3%)

Query: 3   GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCD-EKNAHLKKLEGASENLQLF 61
           G  KE VCVTGA G+I SWLV  LL +GY V  TVRDP + +K  HL  L GA+  L L+
Sbjct: 2   GSQKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLW 61

Query: 62  KTDLLDYEALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAK-V 120
           K DL    +   A  GCTGVFHVA P+   +  +PE ++I P V G  +++ +C KAK V
Sbjct: 62  KADLAVEGSFDDAIRGCTGVFHVATPMDF-ESKDPENEVIKPTVNGMLSIMKACAKAKTV 120

Query: 121 KRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFC---KATENYYCLAKTIAEIQALEYA 177
           +R+V  SS G V  N    +  V DE+CWSD +FC   K T   Y ++KT+AE  A +YA
Sbjct: 121 RRIVFTSSAGTV--NVEEHQKPVYDEDCWSDLDFCRRKKMTGWMYFVSKTLAEKAAWKYA 178

Query: 178 KRGELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKG 214
               LD +++ P++V+GP +  ++  S +  L  + G
Sbjct: 179 AENGLDFISIIPTLVVGPFISTSMPPSLITALSLITG 215

Length = 351

>gnl|CDD|215100 PLN00198, PLN00198, anthocyanidin reductase; Provisional

 Score =  171 bits (434), Expect = 7e-52
 Identities = 90/214 (42%), Positives = 129/214 (60%), Gaps = 7/214 (3%)

Query: 6   KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDE-KNAHLKKLEGASENLQLFKTD 64
           K+  CV G  G++AS L+K LL KGY V+ TVRDP ++ K AHL+ L+   + L++F  D
Sbjct: 9   KKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQELGD-LKIFGAD 67

Query: 65  LLDYEALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAK-VKRV 123
           L D E+  A  AGC  VFHVA PV      +PE  +I PA+ G  NVL +C KAK VKRV
Sbjct: 68  LTDEESFEAPIAGCDLVFHVATPVNF-ASEDPENDMIKPAIQGVHNVLKACAKAKSVKRV 126

Query: 124 VVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENY---YCLAKTIAEIQALEYAKRG 180
           ++ SS  AV +N     G VM+E+ W+D EF  + +     Y  +KT+AE  A ++A+  
Sbjct: 127 ILTSSAAAVSINKLSGTGLVMNEKNWTDVEFLTSEKPPTWGYPASKTLAEKAAWKFAEEN 186

Query: 181 ELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKG 214
            +D++TV P+++ GP L   I +S  L +  + G
Sbjct: 187 NIDLITVIPTLMAGPSLTSDIPSSLSLAMSLITG 220

Length = 338

>gnl|CDD|187536 cd05193, AR_like_SDR_e, aldehyde reductase, flavonoid reductase, and related proteins, extended (e) SDRs

 Score =  167 bits (423), Expect = 1e-50
 Identities = 83/218 (38%), Positives = 119/218 (54%), Gaps = 9/218 (4%)

Query: 9   VCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNA-HLKKLEGASENLQLFKTDLLD 67
           V VTGA G++AS +V+ LL +GY V  TVRDP   K   HL  L+     L+L   DL D
Sbjct: 1   VLVTGASGFVASHVVEQLLERGYKVRATVRDPSKVKKVNHLLDLDAKPGRLELAVADLTD 60

Query: 68  YEALCAATAGCTGVFHVACPVPV-GKVPNPEVQLIDPAVVGTKNVLNSCVKAK-VKRVVV 125
            ++      GC GVFHVA PV    K PN   ++I PA+ GT N L +   AK VKR V+
Sbjct: 61  EQSFDEVIKGCAGVFHVATPVSFSSKDPN---EVIKPAIGGTLNALKAAAAAKSVKRFVL 117

Query: 126 VSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENY---YCLAKTIAEIQALEYAKRGEL 182
            SS G+V++     +G V+DE+ W+ EEF    +     Y  +KT+AE  A ++A    +
Sbjct: 118 TSSAGSVLIPKPNVEGIVLDEKSWNLEEFDSDPKKSAWVYAASKTLAEKAAWKFADENNI 177

Query: 183 DIVTVCPSIVIGPMLQPTINTSSLLLLGFLKGFFFTTP 220
           D++TV P++ IG +      +SS   +  + G    +P
Sbjct: 178 DLITVIPTLTIGTIFDSETPSSSGWAMSLITGNEGVSP 215

This subgroup contains aldehyde reductase and flavonoid reductase of the extended SDR-type and related proteins. Proteins in this subgroup have a complete SDR-type active site tetrad and a close match to the canonical extended SDR NADP-binding motif. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 295

>gnl|CDD|178484 PLN02896, PLN02896, cinnamyl-alcohol dehydrogenase

 Score =  156 bits (397), Expect = 4e-46
 Identities = 97/232 (41%), Positives = 126/232 (54%), Gaps = 22/232 (9%)

Query: 1   MSGEDKE----RVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASE 56
           M  E +E      CVTGA GYI SWLVK LL +GY VH T+RDP   K+ HL       +
Sbjct: 1   MELEGRESATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDP--AKSLHLLSKWKEGD 58

Query: 57  NLQLFKTDLLDYEALCAATAGCTGVFHVACP----VPVGKVPNPE-VQ--LIDPAVVGTK 109
            L+LF+ DL +  +   A  GC GVFHVA      V        E VQ  +IDPA+ GT 
Sbjct: 59  RLRLFRADLQEEGSFDEAVKGCDGVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTL 118

Query: 110 NVLNSCVKAK-VKRVVVVSSIG---AVMLNPNWPKGQVMDEECWSDEEF---CKATENYY 162
           NVL SC+K+K VKRVV  SSI    A   N  W    V+DE C +  +     KA+   Y
Sbjct: 119 NVLKSCLKSKTVKRVVFTSSISTLTAKDSNGRWR--AVVDETCQTPIDHVWNTKASGWVY 176

Query: 163 CLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKG 214
            L+K + E  A +YAK   +D+V+V  + V GP L P++ +S  +LL  + G
Sbjct: 177 VLSKLLTEEAAFKYAKENGIDLVSVITTTVAGPFLTPSVPSSIQVLLSPITG 228

Length = 353

>gnl|CDD|187539 cd05228, AR_FR_like_1_SDR_e, uncharacterized subgroup of aldehyde reductase and flavonoid reductase related proteins, extended (e) SDRs

 Score =  128 bits (324), Expect = 1e-35
 Identities = 73/206 (35%), Positives = 104/206 (50%), Gaps = 22/206 (10%)

Query: 11  VTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEA 70
           VTGA G++ S LV+ LL +GY V   VR         L         +++ + DL D  +
Sbjct: 3   VTGATGFLGSNLVRALLAQGYRVRALVRSG--SDAVLLD-----GLPVEVVEGDLTDAAS 55

Query: 71  LCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIG 130
           L AA  GC  VFH+A    +      E+   +  V GT+NVL++ ++A V+RVV  SSI 
Sbjct: 56  LAAAMKGCDRVFHLAAFTSLWAKDRKELYRTN--VEGTRNVLDAALEAGVRRVVHTSSIA 113

Query: 131 AVMLNPNWPKGQVMDEE-CWSDEEFCKATENYYCLAKTIAEIQALEYAKRGELDIVTVCP 189
           A+   P       +DE   W++  F     N Y  +K +AE++ LE A  G LD+V V P
Sbjct: 114 ALGGPP----DGRIDETTPWNERPFP----NDYYRSKLLAELEVLEAAAEG-LDVVIVNP 164

Query: 190 SIVIGPMLQPTINTSSLLL-LGFLKG 214
           S V GP  +    TS+ L  L +L G
Sbjct: 165 SAVFGPGDEG--PTSTGLDVLDYLNG 188

This subgroup contains proteins of unknown function related to aldehyde reductase and flavonoid reductase of the extended SDR-type. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 318

>gnl|CDD|178195 PLN02583, PLN02583, cinnamoyl-CoA reductase

 Score =  117 bits (294), Expect = 2e-31
 Identities = 67/202 (33%), Positives = 110/202 (54%), Gaps = 9/202 (4%)

Query: 1   MSGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGAS---EN 57
              E  + VCV  A GY+  WLVK LL +GY VH  V+   + +    K++ G S   E 
Sbjct: 1   SFDESSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQK--NGETEIEKEIRGLSCEEER 58

Query: 58  LQLFKTDLLDYEALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVK 117
           L++F  D LDY ++  A  GC+G+F   C  P    P+ + +++D  V    NVL +C +
Sbjct: 59  LKVFDVDPLDYHSILDALKGCSGLF--CCFDPPSDYPSYDEKMVDVEVRAAHNVLEACAQ 116

Query: 118 AK-VKRVVVVSSIGAVMLNP-NWPKGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALE 175
              +++VV  SS+ AV+    N    + +DE  WSD+ FC+  + ++ LAKT++E  A  
Sbjct: 117 TDTIEKVVFTSSLTAVIWRDDNISTQKDVDERSWSDQNFCRKFKLWHALAKTLSEKTAWA 176

Query: 176 YAKRGELDIVTVCPSIVIGPML 197
            A    +++V++   +++GP L
Sbjct: 177 LAMDRGVNMVSINAGLLMGPSL 198

Length = 297

>gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score =  115 bits (289), Expect = 1e-30
 Identities = 58/208 (27%), Positives = 88/208 (42%), Gaps = 20/208 (9%)

Query: 8   RVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLD 67
           R+ VTG  G+I S LV+ LL  G+ V G  R            L+     ++    DL D
Sbjct: 2   RILVTGGAGFIGSHLVERLLAAGHDVRGLDRLR--------DGLDPLLSGVEFVVLDLTD 53

Query: 68  YEALCAATAGC-TGVFHVACPVPV-GKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVV 125
            + +     G    V H+A    V     +   + +D  V GT N+L +   A VKR V 
Sbjct: 54  RDLVDELAKGVPDAVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAGVKRFVF 113

Query: 126 VSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKRGELDIV 185
            SS+  V  +   P    +DE+            N Y ++K  AE     YA+   L +V
Sbjct: 114 ASSVSVVYGD---PPPLPIDEDLGPPR-----PLNPYGVSKLAAEQLLRAYARLYGLPVV 165

Query: 186 TVCPSIVIGPMLQPTINTSSLLLLGFLK 213
            + P  V GP  +P  + SS ++  F++
Sbjct: 166 ILRPFNVYGPGDKP--DLSSGVVSAFIR 191

Length = 314

>gnl|CDD|215370 PLN02686, PLN02686, cinnamoyl-CoA reductase

 Score =  103 bits (258), Expect = 8e-26
 Identities = 66/223 (29%), Positives = 106/223 (47%), Gaps = 14/223 (6%)

Query: 1   MSGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASEN--- 57
            +  +   VCVTG   ++   +V  LL  GY V   V     E    L+++E   E    
Sbjct: 48  GADAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVD--TQEDKEKLREMEMFGEMGRS 105

Query: 58  ---LQLFKTDLLDYEALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNS 114
              +     +L + E+L  A  GC GVFH +  V    +      + +     ++NV+ +
Sbjct: 106 NDGIWTVMANLTEPESLHEAFDGCAGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEA 165

Query: 115 CVK-AKVKRVVVVSSIGAVMLNPNWPKG--QVMDEECWSDEEFCKATENYYCLAKTIAEI 171
           CV+   V++ V  SS+ A +   N+P     V+DEE WSDE FC+  + +Y L K  AE 
Sbjct: 166 CVRTESVRKCVFTSSLLACVWRQNYPHDLPPVIDEESWSDESFCRDNKLWYALGKLKAEK 225

Query: 172 QALEYAKRGELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKG 214
            A   A+   L + T+CP++V GP      +T++   + +LKG
Sbjct: 226 AAWRAARGKGLKLATICPALVTGPGFFRRNSTAT---IAYLKG 265

Length = 367

>gnl|CDD|163279 TIGR03466, HpnA, hopanoid-associated sugar epimerase

 Score =  101 bits (254), Expect = 2e-25
 Identities = 66/188 (35%), Positives = 99/188 (52%), Gaps = 15/188 (7%)

Query: 8   RVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLD 67
           +V VTGA G++ S +V+ LL +G  V   VR   D +N     LEG   ++++ + DL D
Sbjct: 2   KVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRN-----LEGL--DVEIVEGDLRD 54

Query: 68  YEALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVS 127
             +L  A AGC  +FHVA    +   P+PE ++    V GT+N+L + ++A V+RVV  S
Sbjct: 55  PASLRKAVAGCRALFHVAADYRLW-APDPE-EMYAANVEGTRNLLRAALEAGVERVVYTS 112

Query: 128 SIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKRGELDIVTV 187
           S+  + +  +   G   DE   S  +       +Y  +K +AE  ALE A    L +V V
Sbjct: 113 SVATLGVRGD---GTPADETTPSSLD---DMIGHYKRSKFLAEQAALEMAAEKGLPVVIV 166

Query: 188 CPSIVIGP 195
            PS  IGP
Sbjct: 167 NPSTPIGP 174

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. This gene and its association with hopene biosynthesis in Zymomonas mobilis has been noted in the literature where the gene symbol hpnA was assigned. Hopanoids are known to be components of the plasma membrane and to have polar sugar head groups in Z. mobilis and other species. Length = 328

>gnl|CDD|187552 cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid dehydrogenases (3b-HSD)-like, extended (e) SDRs

 Score = 79.4 bits (196), Expect = 2e-17
 Identities = 51/190 (26%), Positives = 75/190 (39%), Gaps = 18/190 (9%)

Query: 8   RVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLD 67
            V VTG  G+    LVK  LL+    +    D      A          N++  K D+ D
Sbjct: 1   SVLVTGGSGFFGERLVK-QLLERGGTYVRSFDIAPPGEALSAW---QHPNIEFLKGDITD 56

Query: 68  YEALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPA-VVGTKNVLNSCVKAKVKRVVVV 126
              +  A +G   VFH A  VP+         L     V GT+NVL++C +  V++ V  
Sbjct: 57  RNDVEQALSGADCVFHTAAIVPLAG----PRDLYWEVNVGGTQNVLDACQRCGVQKFVYT 112

Query: 127 SSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENY-YCLAKTIAEIQALEYAKRGELDIV 185
           SS   +        GQ +      +       ++  Y   K IAEI  LE   R +L   
Sbjct: 113 SSSSVIF------GGQNIHNGD--ETLPYPPLDSDMYAETKAIAEIIVLEANGRDDLLTC 164

Query: 186 TVCPSIVIGP 195
            + P+ + GP
Sbjct: 165 ALRPAGIFGP 174

Extended SDR family domains belonging to this subgroup have the characteristic active site tetrad and a fairly well-conserved NAD(P)-binding motif. 3b-HSD catalyzes the NAD-dependent conversion of various steroids, such as pregnenolone to progesterone, or androstenediol to testosterone. This subgroup includes an unusual bifunctional 3b-HSD/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. It also includes human 3 beta-HSD/HSD3B1 and C(27) 3beta-HSD/ [3beta-hydroxy-delta(5)-C(27)-steroid oxidoreductase; HSD3B7]. C(27) 3beta-HSD/HSD3B7 is a membrane-bound enzyme of the endoplasmic reticulum, that catalyzes the isomerization and oxidation of 7alpha-hydroxylated sterol intermediates, an early step in bile acid biosynthesis. Mutations in the human NSDHL (NAD(P)H steroid dehydrogenase-like protein) cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. Mutations in the human gene encoding C(27) 3beta-HSD underlie a rare autosomal recessive form of neonatal cholestasis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 331

>gnl|CDD|216461 pfam01370, Epimerase, NAD dependent epimerase/dehydratase family

 Score = 77.3 bits (191), Expect = 5e-17
 Identities = 55/189 (29%), Positives = 71/189 (37%), Gaps = 20/189 (10%)

Query: 9   VCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDY 68
           + VTG  G+I S LV+ LL +GY V    R    E     +            + DL D 
Sbjct: 1   ILVTGGTGFIGSHLVRRLLQEGYEVIVLGRRRRSESLNTGRIR--------FHEGDLTDP 52

Query: 69  EALCAATAGC--TGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVV 126
           +AL    A      V H+A    VG         I   V+GT  +L +  +A VKR V  
Sbjct: 53  DALERLLAEVQPDAVIHLAAQSGVGASFEDPADFIRANVLGTLRLLEAARRAGVKRFVFA 112

Query: 127 SSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKRGELDIVT 186
           SS   V        G V D      E+      + Y  AK  AE     YA+   L  V 
Sbjct: 113 SS-SEV-------YGDVADPP--ITEDTPLGPLSPYAAAKLAAERLVEAYARAYGLRAVI 162

Query: 187 VCPSIVIGP 195
           +    V GP
Sbjct: 163 LRLFNVYGP 171

This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. Length = 233

>gnl|CDD|216283 pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydrogenase/isomerase family

 Score = 76.6 bits (189), Expect = 2e-16
 Identities = 54/215 (25%), Positives = 83/215 (38%), Gaps = 35/215 (16%)

Query: 11  VTGAGGYIASWLVKYLLLKG--YMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDY 68
           VTG GG++   +V+ LL +G    V         E      KL+  +      + D+ D 
Sbjct: 2   VTGGGGFLGRHIVRLLLREGELQEVRVFDLRFSPELLEDFSKLQVIT----YIEGDVTDK 57

Query: 69  EALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSS 128
           + L  A  G   V H A  + V      +  ++   V GT+NVL++CVKA V+ +V  SS
Sbjct: 58  QDLRRALQGSDVVIHTAAIIDVFGKAYRD-TIMKVNVKGTQNVLDACVKAGVRVLVYTSS 116

Query: 129 IGAVMLNPNWPKGQVM---DEE-----CWSDEEFCKATENYYCLAKTIAEIQALE---YA 177
           +  V   PN   GQ +   DE         D          Y  +K +AE   L+     
Sbjct: 117 MEVVG--PN-SYGQPIVNGDETTPYESTHQDP---------YPESKALAEKLVLKANGST 164

Query: 178 KRGELDIVTVC--PSIVIGP---MLQPTINTSSLL 207
            +    + T    P+ + G     L P +      
Sbjct: 165 LKNGGRLYTCALRPAGIFGEGDPFLFPFLVRLLKN 199

The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyzes the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. Length = 280

>gnl|CDD|212494 cd08946, SDR_e, extended (e) SDRs

 Score = 73.1 bits (180), Expect = 8e-16
 Identities = 48/188 (25%), Positives = 70/188 (37%), Gaps = 51/188 (27%)

Query: 9   VCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDY 68
           + VTG  G+I S LV+ LL +G+ V                              D LD 
Sbjct: 1   ILVTGGAGFIGSHLVRRLLERGHEVVVI---------------------------DRLDV 33

Query: 69  EALCAATAGCTGVFHVACPV-PVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVS 127
                       V H+A  V       NP+ +  +  VVGT N+L +  KA VKR V  S
Sbjct: 34  ------------VVHLAALVGVPASWDNPD-EDFETNVVGTLNLLEAARKAGVKRFVYAS 80

Query: 128 SIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKRGELDIVTV 187
           S  +V  +P              +E   +   + Y ++K  AE     Y +   L +V +
Sbjct: 81  SA-SVYGSPEGLP--------EEEETPPRPL-SPYGVSKLAAEHLLRSYGESYGLPVVIL 130

Query: 188 CPSIVIGP 195
             + V GP
Sbjct: 131 RLANVYGP 138

Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 200

>gnl|CDD|187554 cd05243, SDR_a5, atypical (a) SDRs, subgroup 5

 Score = 72.3 bits (178), Expect = 2e-15
 Identities = 49/147 (33%), Positives = 71/147 (48%), Gaps = 13/147 (8%)

Query: 8   RVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLD 67
           +V V GA G +   +V+ LL +GY V   VRDP     +  +KLE A    ++   DL D
Sbjct: 1   KVLVVGATGKVGRHVVRELLDRGYQVRALVRDP-----SQAEKLEAAG--AEVVVGDLTD 53

Query: 68  YEALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVS 127
            E+L AA  G   V   A        P  E   +D    G  N++++  KA VKR V+VS
Sbjct: 54  AESLAAALEGIDAVISAAGSGG-KGGPRTE--AVD--YDGNINLIDAAKKAGVKRFVLVS 108

Query: 128 SIGAV-MLNPNWPKGQVMDEECWSDEE 153
           SIGA    +P    G  +D +  +++ 
Sbjct: 109 SIGADKPSHPLEALGPYLDAKRKAEDY 135

This subgroup contains atypical SDRs, some of which are identified as putative NAD(P)-dependent epimerases, one as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is very similar to the extended SDRs, GXXGXXG, and binds NADP. Generally, this subgroup has poor conservation of the active site tetrad; however, individual sequences do contain matches to the YXXXK active site motif, the upstream Ser, and there is a highly conserved Asp in place of the usual active site Asn throughout the subgroup. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 203

>gnl|CDD|187543 cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase, subgroup 4, extended (e) SDRs

 Score = 69.3 bits (170), Expect = 7e-14
 Identities = 51/190 (26%), Positives = 76/190 (40%), Gaps = 24/190 (12%)

Query: 8   RVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLD 67
           +V VTGA G+I   LV  LL +G  V   VR             E A  ++ L   +L D
Sbjct: 1   KVLVTGANGFIGRALVDKLLSRGEEVRIAVR-----------NAENAEPSVVLA--ELPD 47

Query: 68  YEALCAATAGCTGVFHVACPVPV--GKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVV 125
            ++      G   V H+A  V V   +  +P           T+ +  +  +  VKR V 
Sbjct: 48  IDSFTDLFLGVDAVVHLAARVHVMNDQGADPLSDYRKVNTELTRRLARAAARQGVKRFVF 107

Query: 126 VSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKRGELDIV 185
           +SS+  V        G   DE    D     A ++ Y  +K  AE   LE      +++V
Sbjct: 108 LSSV-KVNGEGT--VGAPFDET---DPP---APQDAYGRSKLEAERALLELGASDGMEVV 158

Query: 186 TVCPSIVIGP 195
            + P +V GP
Sbjct: 159 ILRPPMVYGP 168

UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of bacterial proteins, and includes the Staphylococcus aureus capsular polysaccharide Cap5N, which may have a role in the synthesis of UDP-N-acetyl-d-fucosamine. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 303

>gnl|CDD|187561 cd05251, NmrA_like_SDR_a, NmrA (a transcriptional regulator) and HSCARG (an NADPH sensor) like proteins, atypical (a) SDRs

 Score = 65.8 bits (161), Expect = 7e-13
 Identities = 35/115 (30%), Positives = 51/115 (44%), Gaps = 15/115 (13%)

Query: 11  VTGAGGYIASWLVKYLLLK-GYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYE 69
           V GA G     +V+ LL   G+ V    RDP    +   K L  A+  +++ + DL D E
Sbjct: 3   VFGATGKQGGSVVRALLKDPGFKVRALTRDP---SSPAAKAL--AAPGVEVVQGDLDDPE 57

Query: 70  ALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVV 124
           +L AA  G  GVF V      G     E+          KNV+++  +A V+  V
Sbjct: 58  SLEAALKGVYGVFLVTDFWEAGGE--DEIAQ-------GKNVVDAAKRAGVQHFV 103

NmrA and HSCARG like proteins. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Atypical SDRs are distinct from classical SDRs. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 242

>gnl|CDD|222146 pfam13460, NAD_binding_10, NADH(P)-binding

 Score = 63.9 bits (156), Expect = 1e-12
 Identities = 46/185 (24%), Positives = 63/185 (34%), Gaps = 39/185 (21%)

Query: 11  VTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEA 70
           V GA G     LVK LL +G+ V    R+P         K    +  +   + DL D   
Sbjct: 3   VIGATGKTGRRLVKELLARGHQVTALSRNP--------SKA--PAPGVTPVQKDLFDLAD 52

Query: 71  LCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIG 130
           L  A AG   V       P                 G K++L++  +A V+R+VVVS+ G
Sbjct: 53  LAEALAGVDAVVDAFGARP-------------DDSDGVKHLLDAAARAGVRRIVVVSAAG 99

Query: 131 AVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKRGELDIVTVCPS 190
                P   +          D          Y  AK  AE + L       LD   V P 
Sbjct: 100 LYRDEPGTFR--------LDDAPLFPP----YARAKAAAE-ELLR---ASGLDWTIVRPG 143

Query: 191 IVIGP 195
            +   
Sbjct: 144 ALFDE 148

Length = 182

>gnl|CDD|187551 cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase (G4E), subgroup 3, extended (e) SDRs

 Score = 63.9 bits (156), Expect = 6e-12
 Identities = 51/204 (25%), Positives = 79/204 (38%), Gaps = 22/204 (10%)

Query: 9   VCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDY 68
           + VTGA G +   L +  L     V G             ++  G+   ++  + D+ D 
Sbjct: 1   ILVTGAAGGLGRLLAR-RLAASPRVIGVDGLDR-------RRPPGSPPKVEYVRLDIRDP 52

Query: 69  EA-LCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVS 127
            A           V H+A  +   +    E   I+  V GT+NVL++C  A V RVVV S
Sbjct: 53  AAADVFREREADAVVHLAFILDPPRDG-AERHRIN--VDGTQNVLDACAAAGVPRVVVTS 109

Query: 128 SIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKR-GELDIVT 186
           S+         P       E   D     + E  Y   K   E    E+ +R  EL++  
Sbjct: 110 SVAVY---GAHPDNPAPLTE---DAPLRGSPEFAYSRDKAEVEQLLAEFRRRHPELNVTV 163

Query: 187 VCPSIVIGPMLQPTINTSSLLLLG 210
           + P+ ++GP    T NT+   L  
Sbjct: 164 LRPATILGPG---TRNTTRDFLSP 184

Members of this bacterial subgroup are identified as possible sugar epimerases, such as UDP-glucose 4 epimerase. However, while the NAD(P)-binding motif is fairly well conserved, not all members retain the canonical active site tetrad of the extended SDRs. UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 306

>gnl|CDD|187566 cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-epimerase, extended (e) SDRs

 Score = 63.8 bits (156), Expect = 6e-12
 Identities = 53/177 (29%), Positives = 76/177 (42%), Gaps = 26/177 (14%)

Query: 8   RVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLD 67
           RV VTG  G+I S LV+ LL +G+ V   V D  +      + L     N++  + D+ D
Sbjct: 1   RVLVTGGAGFIGSHLVERLLERGHEVI--VLD--NLSTGKKENLPEVKPNVKFIEGDIRD 56

Query: 68  YEALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPA------VVGTKNVLNSCVKAKVK 121
            E +  A  G   VFH A       VP   ++  DP       V+GT N+L +  KA VK
Sbjct: 57  DELVEFAFEGVDYVFHQAA---QASVP-RSIE--DPIKDHEVNVLGTLNLLEAARKAGVK 110

Query: 122 RVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAK 178
           R V  SS       P  PK          DE+      + Y ++K   E+    +A+
Sbjct: 111 RFVYASSSSVYGDPPYLPK----------DEDHPPNPLSPYAVSKYAGELYCQVFAR 157

This subgroup contains UDP-N-acetylglucosamine 4-epimerase of Pseudomonas aeruginosa, WbpP, an extended SDR, that catalyzes the NAD+ dependent conversion of UDP-GlcNAc and UDPGalNA to UDP-Glc and UDP-Gal. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 304

>gnl|CDD|187545 cd05234, UDP_G4E_2_SDR_e, UDP-glucose 4 epimerase, subgroup 2, extended (e) SDRs

 Score = 62.3 bits (152), Expect = 2e-11
 Identities = 43/129 (33%), Positives = 56/129 (43%), Gaps = 19/129 (14%)

Query: 8   RVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLD 67
           R+ VTG  G+I S LV  LL +G  V   V D          + E  ++  +  K DLLD
Sbjct: 1   RILVTGGAGFIGSHLVDRLLEEGNEV--VVVDNLSSGRRENIEPEFENKAFRFVKRDLLD 58

Query: 68  YEALCAATAGCTGVFHVACPVPVGKVPNPEVQL--IDPA------VVGTKNVLNSCVKAK 119
                A       VFH+A         NP+V+L   DP       V+ T NVL +     
Sbjct: 59  TADKVAKK-DGDTVFHLAA--------NPDVRLGATDPDIDLEENVLATYNVLEAMRANG 109

Query: 120 VKRVVVVSS 128
           VKR+V  SS
Sbjct: 110 VKRIVFASS 118

UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of archaeal and bacterial proteins, and has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305

>gnl|CDD|187573 cd05263, MupV_like_SDR_e, Pseudomonas fluorescens MupV-like, extended (e) SDRs

 Score = 61.2 bits (149), Expect = 4e-11
 Identities = 41/195 (21%), Positives = 68/195 (34%), Gaps = 26/195 (13%)

Query: 11  VTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAH-LKKLEGASENLQLFKTDL---- 65
           VTG  G++   LVK LL  G+ V   VR     +    +++    ++ +++ + DL    
Sbjct: 3   VTGGTGFLGRHLVKRLLENGFKVLVLVRSESLGEAHERIEEAGLEADRVRVLEGDLTQPN 62

Query: 66  --LDYEALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVV---GTKNVLNSCVKAKV 120
             L   A          V H A         + +    D       GT++VL    +  +
Sbjct: 63  LGLSAAASRELAGKVDHVIHCAA------SYDFQAPNEDAWRTNIDGTEHVLELAARLDI 116

Query: 121 KRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKRG 180
           +R   VS+                  E   +       +N Y  +K  AE      A + 
Sbjct: 117 QRFHYVSTAYVAGNREGN------IRETELNPGQ--NFKNPYEQSKAEAEQLVRAAATQI 168

Query: 181 ELDIVTVCPSIVIGP 195
            L +    PSIV+G 
Sbjct: 169 PLTVYR--PSIVVGD 181

This subgroup of extended SDR family domains have the characteristic active site tetrad and a well-conserved NAD(P)-binding motif. This subgroup is not well characterized, its members are annotated as having a variety of putative functions. One characterized member is Pseudomonas fluorescens MupV a protein involved in the biosynthesis of Mupirocin, a polyketide-derived antibiotic. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|187671 cd09811, 3b-HSD_HSDB1_like_SDR_e, human 3beta-HSD (hydroxysteroid dehydrogenase) and HSD3B1(delta 5-delta 4-isomerase)-like, extended (e) SDRs

 Score = 61.0 bits (148), Expect = 8e-11
 Identities = 42/129 (32%), Positives = 62/129 (48%), Gaps = 7/129 (5%)

Query: 11  VTGAGGYIASWLVKYLLLKGYMVHGTVR----DPCDEKNAHLKKLEGASENLQLFKTDLL 66
           VTG GG++   +++ LLL+       +R        E   H +K +G +  +   + D+ 
Sbjct: 4   VTGGGGFLGQHIIR-LLLERKEELKEIRVLDKAFGPELIEHFEKSQGKTY-VTDIEGDIK 61

Query: 67  DYEALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVV 126
           D   L  A  G + V H A  V V   PN E +L +  V GT+ VL +CV+  VKR+V  
Sbjct: 62  DLSFLFRACQGVSVVIHTAAIVDVFGPPNYE-ELEEVNVNGTQAVLEACVQNNVKRLVYT 120

Query: 127 SSIGAVMLN 135
           SSI     N
Sbjct: 121 SSIEVAGPN 129

This extended-SDR subgroup includes human 3 beta-HSD/HSD3B1 and C(27) 3beta-HSD/ [3beta-hydroxy-delta(5)-C(27)-steroid oxidoreductase; HSD3B7], and related proteins. These proteins have the characteristic active site tetrad and NAD(P)-binding motif of extended SDRs. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. C(27) 3beta-HSD is a membrane-bound enzyme of the endoplasmic reticulum, it catalyzes the isomerization and oxidation of 7alpha-hydroxylated sterol intermediates, an early step in bile acid biosynthesis. Mutations in the human gene encoding C(27) 3beta-HSD underlie a rare autosomal recessive form of neonatal cholestasis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 354

>gnl|CDD|200431 TIGR04180, EDH_00030, NAD dependent epimerase/dehydratase, LLPSF_EDH_00030 family

 Score = 58.9 bits (143), Expect = 2e-10
 Identities = 38/123 (30%), Positives = 59/123 (47%), Gaps = 5/123 (4%)

Query: 9   VCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGA-SENLQLFKTDLLD 67
           V VTGA G+I S LV+ L+ +GY V   V          L        + +++   D+ D
Sbjct: 1   VLVTGADGFIGSHLVEALVRQGYEVRAFVLYNSFNSWGWLDTSPPEVKDKIEVVTGDIRD 60

Query: 68  YEALCAATAGCTGVFHVAC--PVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVV 125
            +++  A  GC  VFH+A    +P   +  P+   +D  V GT NVL +     V++VV 
Sbjct: 61  PDSVRKAMKGCDVVFHLAALIAIPYSYI-APD-SYVDTNVTGTLNVLQAARDLGVEKVVH 118

Query: 126 VSS 128
            S+
Sbjct: 119 TST 121

This clade within the NAD dependent epimerase/dehydratase superfamily (pfam01370) is characterized by inclusion of its members within a cassette of seven distinctive enzymes. These include four genes homologous to the elements of the neuraminic (sialic) acid biosynthesis cluster (NeuABCD), an aminotransferase and a nucleotidyltransferase in addition to the epimerase/dehydratase. Together it is very likely that these enzymes direct the biosynthesis of a nine-carbon sugar analagous to CMP-neuraminic acid. These seven genes form the core of the cassette, although they are often accompanied by additional genes that may further modify the product sugar. Although this cassette is widely distributed in bacteria, the family nomenclature arises from the instance in Leptospira interrogans serovar Lai, str. 56601, where it appears as the 30th gene in the 91-gene lipopolysaccharide biosynthesis cluster. Length = 297

>gnl|CDD|187567 cd05257, Arna_like_SDR_e, Arna decarboxylase_like, extended (e) SDRs

 Score = 57.7 bits (140), Expect = 7e-10
 Identities = 35/125 (28%), Positives = 51/125 (40%), Gaps = 10/125 (8%)

Query: 8   RVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLD 67
            V VTGA G+I S L + LL +G+ V     D  +  N+         +       D+ D
Sbjct: 1   NVLVTGADGFIGSHLTERLLREGHEV--RALDIYNSFNSWGLLDNAVHDRFHFISGDVRD 58

Query: 68  YEALCAATAGCTGVFHVACPVPVGKVP----NPEVQLIDPAVVGTKNVLNSCVKAKVKRV 123
              +      C  VFH+A  +    +P     P    ++  V GT NVL +      KRV
Sbjct: 59  ASEVEYLVKKCDVVFHLAALI---AIPYSYTAPL-SYVETNVFGTLNVLEAACVLYRKRV 114

Query: 124 VVVSS 128
           V  S+
Sbjct: 115 VHTST 119

Decarboxylase domain of ArnA. ArnA, is an enzyme involved in the modification of outer membrane protein lipid A of gram-negative bacteria. It is a bifunctional enzyme that catalyzes the NAD-dependent decarboxylation of UDP-glucuronic acid and N-10-formyltetrahydrofolate-dependent formylation of UDP-4-amino-4-deoxy-l-arabinose; its NAD-dependent decaboxylating activity is in the C-terminal 360 residues. This subgroup belongs to the extended SDR family, however the NAD binding motif is not a perfect match and the upstream Asn of the canonical active site tetrad is not conserved. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 316

>gnl|CDD|187537 cd05226, SDR_e_a, Extended (e) and atypical (a) SDRs

 Score = 56.3 bits (136), Expect = 7e-10
 Identities = 37/133 (27%), Positives = 60/133 (45%), Gaps = 14/133 (10%)

Query: 9   VCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDY 68
           + + GA G+I   L + LL +G+ V   VR+         +  +   E + + + DL D 
Sbjct: 1   ILILGATGFIGRALARELLEQGHEVTLLVRNT-------KRLSKEDQEPVAVVEGDLRDL 53

Query: 69  EALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSS 128
           ++L  A  G   V H+A      +    EV      V GT+NVL +  +A VK  + +SS
Sbjct: 54  DSLSDAVQGVDVVIHLAGAPRDTRDFC-EVD-----VEGTRNVLEAAKEAGVKHFIFISS 107

Query: 129 IGAVM-LNPNWPK 140
           +GA   L+     
Sbjct: 108 LGAYGDLHEETEP 120

Extended or atypical short-chain dehydrogenases/reductases (SDRs, aka tyrosine-dependent oxidoreductases) are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 176

>gnl|CDD|187578 cd05269, TMR_SDR_a, triphenylmethane reductase (TMR)-like proteins, NMRa-like, atypical (a) SDRs

 Score = 57.3 bits (139), Expect = 8e-10
 Identities = 31/121 (25%), Positives = 53/121 (43%), Gaps = 19/121 (15%)

Query: 11  VTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEA 70
           VTGA G + + +V+ LL K   V   VR+P        K    A++ +++ + D  D E 
Sbjct: 3   VTGATGKLGTAVVELLLAKVASVVALVRNPE-------KAKAFAADGVEVRQGDYDDPET 55

Query: 71  LCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIG 130
           L  A  G   +      +    + +   Q         KN +++  +A VK +V +S+ G
Sbjct: 56  LERAFEGVDRLL----LISPSDLEDRIQQH--------KNFIDAAKQAGVKHIVYLSASG 103

Query: 131 A 131
           A
Sbjct: 104 A 104

TMR is an atypical NADP-binding protein of the SDR family. It lacks the active site residues of the SDRs but has a glycine rich NAD(P)-binding motif that matches the extended SDRs. Proteins in this subgroup however, are more similar in length to the classical SDRs. TMR was identified as a reducer of triphenylmethane dyes, important environmental pollutants. This subgroup also includes Escherichia coli NADPH-dependent quinine oxidoreductase (QOR2), which catalyzes two-electron reduction of quinone; but is unlikely to play a major role in protecting against quinone cytotoxicity. Atypical SDRs are distinct from classical SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 272

>gnl|CDD|187558 cd05247, UDP_G4E_1_SDR_e, UDP-glucose 4 epimerase, subgroup 1, extended (e) SDRs

 Score = 57.5 bits (140), Expect = 1e-09
 Identities = 46/133 (34%), Positives = 57/133 (42%), Gaps = 10/133 (7%)

Query: 8   RVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLE-GASENLQLFKTDLL 66
           +V VTG  GYI S  V  LL  GY V   V D     N H + L       ++ ++ D+ 
Sbjct: 1   KVLVTGGAGYIGSHTVVELLEAGYDV--VVLDNL--SNGHREALPRIEKIRIEFYEGDIR 56

Query: 67  DYEALCA--ATAGCTGVFHVACPVPVGK-VPNPEVQLIDPAVVGTKNVLNSCVKAKVKRV 123
           D  AL    A      V H A    VG+ V  P  +  D  VVGT N+L +     VK  
Sbjct: 57  DRAALDKVFAEHKIDAVIHFAALKAVGESVQKPL-KYYDNNVVGTLNLLEAMRAHGVKN- 114

Query: 124 VVVSSIGAVMLNP 136
            V SS  AV   P
Sbjct: 115 FVFSSSAAVYGEP 127

UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 323

>gnl|CDD|187570 cd05260, GDP_MD_SDR_e, GDP-mannose 4,6 dehydratase, extended (e) SDRs

 Score = 57.2 bits (139), Expect = 1e-09
 Identities = 37/126 (29%), Positives = 53/126 (42%), Gaps = 7/126 (5%)

Query: 8   RVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLD 67
           R  +TG  G   S+L ++LL KGY VHG VR         +  L    + + L   DL D
Sbjct: 1   RALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTDRIDHLYINKDRITLHYGDLTD 60

Query: 68  YEALCAA--TAGCTGVFHVACP--VPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVK-R 122
             +L  A        ++H+A    V V    +PE    +   VGT N+L +     +  R
Sbjct: 61  SSSLRRAIEKVRPDEIYHLAAQSHVKVS-FDDPE-YTAEVNAVGTLNLLEAIRILGLDAR 118

Query: 123 VVVVSS 128
               SS
Sbjct: 119 FYQASS 124

GDP-mannose 4,6 dehydratase, a homodimeric SDR, catalyzes the NADP(H)-dependent conversion of GDP-(D)-mannose to GDP-4-keto, 6-deoxy-(D)-mannose in the fucose biosynthesis pathway. These proteins have the canonical active site triad and NAD-binding pattern, however the active site Asn is often missing and may be substituted with Asp. A Glu residue has been identified as an important active site base. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 316

>gnl|CDD|224012 COG1087, GalE, UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

 Score = 54.1 bits (131), Expect = 1e-08
 Identities = 41/125 (32%), Positives = 61/125 (48%), Gaps = 12/125 (9%)

Query: 8   RVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNA-HLKKLEGASENLQLFKTDLL 66
           +V VTG  GYI S  V+ LL  G+ V   V D     +   L KL+      + ++ DLL
Sbjct: 2   KVLVTGGAGYIGSHTVRQLLKTGHEVV--VLDNLSNGHKIALLKLQF-----KFYEGDLL 54

Query: 67  DYEALCA--ATAGCTGVFHVACPVPVGK-VPNPEVQLIDPAVVGTKNVLNSCVKAKVKRV 123
           D   L A         V H A  + VG+ V NP ++  D  VVGT N++ + ++  VK+ 
Sbjct: 55  DRALLTAVFEENKIDAVVHFAASISVGESVQNP-LKYYDNNVVGTLNLIEAMLQTGVKKF 113

Query: 124 VVVSS 128
           +  S+
Sbjct: 114 IFSST 118

Length = 329

>gnl|CDD|187562 cd05252, CDP_GD_SDR_e, CDP-D-glucose 4,6-dehydratase, extended (e) SDRs

 Score = 53.9 bits (130), Expect = 2e-08
 Identities = 40/124 (32%), Positives = 54/124 (43%), Gaps = 5/124 (4%)

Query: 8   RVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLD 67
           RV VTG  G+  SWL  +L   G  V G   DP    N  L +L      +   + D+ D
Sbjct: 6   RVLVTGHTGFKGSWLSLWLQELGAKVIGYSLDPPTNPN--LFELANLDNKISSTRGDIRD 63

Query: 68  YEALCAATAGCTG--VFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAK-VKRVV 124
             AL  A        VFH+A    V       V+  +  V+GT N+L +  +   VK VV
Sbjct: 64  LNALREAIREYEPEIVFHLAAQPLVRLSYKDPVETFETNVMGTVNLLEAIRETGSVKAVV 123

Query: 125 VVSS 128
            V+S
Sbjct: 124 NVTS 127

This subgroup contains CDP-D-glucose 4,6-dehydratase, an extended SDR, which catalyzes the conversion of CDP-D-glucose to CDP-4-keto-6-deoxy-D-glucose. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 336

>gnl|CDD|187672 cd09812, 3b-HSD_like_1_SDR_e, 3beta-hydroxysteroid dehydrogenase (3b-HSD)-like, subgroup1, extended (e) SDRs

 Score = 53.7 bits (129), Expect = 2e-08
 Identities = 43/172 (25%), Positives = 70/172 (40%), Gaps = 24/172 (13%)

Query: 9   VCVTGAGGYIASWLVKYLLLKG-YMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLD 67
           V +TG GGY    L   L   G +++   +R P  E            E ++  + D+ D
Sbjct: 2   VLITGGGGYFGFRLGCALAKSGVHVILFDIRRPQQE----------LPEGIKFIQADVRD 51

Query: 68  YEALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVS 127
              L  A AG   VFH+A     G+       + +  V GT+N++  CV+ +V R++  S
Sbjct: 52  LSQLEKAVAGVDCVFHIASYGMSGREQLNRELIEEINVRGTENIIQVCVRRRVPRLIYTS 111

Query: 128 SIGAVMLNPNWPKGQVMDEECWSDEEF----CKATENYYCLAKTIAEIQALE 175
           +   +        GQ +      DE           ++Y   K+IAE   L+
Sbjct: 112 TFNVIF------GGQPIRN---GDESLPYLPLDLHVDHYSRTKSIAEQLVLK 154

An uncharacterized subgroup of the 3b-HSD-like extended-SDR family. Proteins in this subgroup have the characteristic active site tetrad and NAD(P)-binding motif of extended-SDRs. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 339

>gnl|CDD|187572 cd05262, SDR_a7, atypical (a) SDRs, subgroup 7

 Score = 53.1 bits (128), Expect = 3e-08
 Identities = 50/194 (25%), Positives = 79/194 (40%), Gaps = 36/194 (18%)

Query: 8   RVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLD 67
           +V VTGA G+I S +V+ L+  G+ V G  R    +  A   KLE A    Q+ + DL D
Sbjct: 2   KVFVTGATGFIGSAVVRELVAAGHEVVGLAR---SDAGA--AKLEAAG--AQVHRGDLED 54

Query: 68  YEALCAATAGCTGVFHVA------CPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVK 121
            + L  A A    V H+A            +V    ++ +  A+ GT            K
Sbjct: 55  LDILRKAAAEADAVIHLAFTHDFDNFAQACEVDRRAIEALGEALRGTG-----------K 103

Query: 122 RVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKRGE 181
            ++  S I  +            +E+  + ++    T      A+ ++E  ALE A+RG 
Sbjct: 104 PLIYTSGIWLL------GPTGGQEEDEEAPDD--PPTPA----ARAVSEAAALELAERGV 151

Query: 182 LDIVTVCPSIVIGP 195
              V   P +V G 
Sbjct: 152 RASVVRLPPVVHGR 165

This subgroup contains atypical SDRs of unknown function. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 291

>gnl|CDD|217199 pfam02719, Polysacc_synt_2, Polysaccharide biosynthesis protein

 Score = 52.5 bits (127), Expect = 4e-08
 Identities = 43/143 (30%), Positives = 63/143 (44%), Gaps = 28/143 (19%)

Query: 9   VCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPC-------DEKN----AHLKKLEGASEN 57
           V VTG GG I S L + +L           +P        DE          + E     
Sbjct: 1   VLVTGGGGSIGSELCRQIL---------KFNPKKIILFSRDEFKLYEIRQELRQEYNDPK 51

Query: 58  LQLFKTDLLDYEALCAA--TAGCTGVFHVAC--PVPVGKVPNPEVQLIDPAVVGTKNVLN 113
           L+ F  D+ D E L  A    G   VFH A    VP+ +  NP ++ I   V+GT+NV  
Sbjct: 52  LRFFIGDVRDRERLERAMEQHGVDTVFHAAALKHVPLVEY-NP-MEAIKTNVLGTENVAE 109

Query: 114 SCVKAKVKRVVVVSSIGAVMLNP 136
           + ++  V++ V++S+  AV  NP
Sbjct: 110 AAIENGVEKFVLISTDKAV--NP 130

This is a family of diverse bacterial polysaccharide biosynthesis proteins including the CapD protein, WalL protein mannosyl-transferase and several putative epimerases (e.g. WbiI). Length = 280

>gnl|CDD|187563 cd05253, UDP_GE_SDE_e, UDP glucuronic acid epimerase, extended (e) SDRs

 Score = 51.6 bits (124), Expect = 9e-08
 Identities = 47/139 (33%), Positives = 61/139 (43%), Gaps = 9/139 (6%)

Query: 8   RVCVTGAGGYIASWLVKYLLLKGYMVHG--TVRDPCDE--KNAHLKKLEGASENLQLFKT 63
           ++ VTGA G+I   + K LL +G  V G   + D  D   K A L+ L G S   +  K 
Sbjct: 2   KILVTGAAGFIGFHVAKRLLERGDEVVGIDNLNDYYDVRLKEARLELL-GKSGGFKFVKG 60

Query: 64  DLLDYEAL--CAATAGCTGVFHVACPVPVG-KVPNPEVQLIDPAVVGTKNVLNSCVKAKV 120
           DL D EAL           V H+A    V   + NP    +D  +VG  N+L  C    V
Sbjct: 61  DLEDREALRRLFKDHEFDAVIHLAAQAGVRYSLENPHA-YVDSNIVGFLNLLELCRHFGV 119

Query: 121 KRVVVVSSIGAVMLNPNWP 139
           K +V  SS     LN   P
Sbjct: 120 KHLVYASSSSVYGLNTKMP 138

This subgroup contains UDP-D-glucuronic acid 4-epimerase, an extended SDR, which catalyzes the conversion of UDP-alpha-D-glucuronic acid to UDP-alpha-D-galacturonic acid. This group has the SDR's canonical catalytic tetrad and the TGxxGxxG NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 332

>gnl|CDD|187548 cd05237, UDP_invert_4-6DH_SDR_e, UDP-Glcnac (UDP-linked N-acetylglucosamine) inverting 4,6-dehydratase, extended (e) SDRs

 Score = 51.5 bits (124), Expect = 1e-07
 Identities = 45/138 (32%), Positives = 67/138 (48%), Gaps = 16/138 (11%)

Query: 8   RVCVTGAGGYIASWLVKYLLLKG-YMVHGTVRDPCDEKNAH--LKKLEG--ASENLQLFK 62
            + VTG  G I S LV+ +L  G   +    RD   E   H  +++L      + L+   
Sbjct: 4   TILVTGGAGSIGSELVRQILKFGPKKLIVFDRD---ENKLHELVRELRSRFPHDKLRFII 60

Query: 63  TDLLDYEALCAA--TAGCTGVFHVAC--PVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKA 118
            D+ D E L  A    G   VFH A    VP  +  NPE + I   V+GTKNV+++ ++ 
Sbjct: 61  GDVRDKERLRRAFKERGPDIVFHAAALKHVPSME-DNPE-EAIKTNVLGTKNVIDAAIEN 118

Query: 119 KVKRVVVVSSIGAVMLNP 136
            V++ V +S+  AV  NP
Sbjct: 119 GVEKFVCISTDKAV--NP 134

UDP-Glcnac inverting 4,6-dehydratase was identified in Helicobacter pylori as the hexameric flaA1 gene product (FlaA1). FlaA1 is hexameric, possesses UDP-GlcNAc-inverting 4,6-dehydratase activity, and catalyzes the first step in the creation of a pseudaminic acid derivative in protein glycosylation. Although this subgroup has the NADP-binding motif characteristic of extended SDRs, its members tend to have a Met substituted for the active site Tyr found in most SDR families. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 287

>gnl|CDD|187581 cd05273, GME-like_SDR_e, Arabidopsis thaliana GDP-mannose-3',5'-epimerase (GME)-like, extended (e) SDRs

 Score = 50.9 bits (122), Expect = 1e-07
 Identities = 34/123 (27%), Positives = 56/123 (45%), Gaps = 8/123 (6%)

Query: 7   ERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLL 66
           +R  VTGAGG+I S L + L  +G+ V G   D   +   H+ +     E   +   DL 
Sbjct: 1   QRALVTGAGGFIGSHLAERLKAEGHYVRGA--D--WKSPEHMTQPTDDDEFHLV---DLR 53

Query: 67  DYEALCAATAGCTGVFHVACPV-PVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVV 125
           + E    AT G   VFH+A  +  +G + +    ++    +   N+L +     V+R + 
Sbjct: 54  EMENCLKATEGVDHVFHLAADMGGMGYIQSNHAVIMYNNTLINFNMLEAARINGVERFLF 113

Query: 126 VSS 128
            SS
Sbjct: 114 ASS 116

This subgroup of NDP-sugar epimerase/dehydratases are extended SDRs; they have the characteristic active site tetrad, and an NAD-binding motif: TGXXGXX[AG], which is a close match to the canonical NAD-binding motif. Members include Arabidopsis thaliana GDP-mannose-3',5'-epimerase (GME) which catalyzes the epimerization of two positions of GDP-alpha-D-mannose to form GDP-beta-L-galactose. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 328

>gnl|CDD|187555 cd05244, BVR-B_like_SDR_a, biliverdin IX beta reductase (BVR-B, aka flavin reductase)-like proteins; atypical (a) SDRs

 Score = 49.9 bits (120), Expect = 2e-07
 Identities = 37/140 (26%), Positives = 63/140 (45%), Gaps = 24/140 (17%)

Query: 11  VTGAGGYIASWLVKYLLLKGYMVHGTVRDPC--DEKNAHLKKLEGASENLQLFKTDLLDY 68
           + GA G   S +V+  L +G+ V   VRDP     ++  LK ++G          D+LD 
Sbjct: 4   IIGATGRTGSAIVREALARGHEVTALVRDPAKLPAEHEKLKVVQG----------DVLDL 53

Query: 69  EALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVK-AKVKRVVVVS 127
           E +  A  G   V  ++    +G     ++        GT+N++ S +K A VKR++VV 
Sbjct: 54  EDVKEALEGQDAV--ISA---LG--TRNDLSPTTLHSEGTRNIV-SAMKAAGVKRLIVVG 105

Query: 128 SIGAVMLNPNWPKGQVMDEE 147
             G      + PK  ++ + 
Sbjct: 106 GAG---SLDDRPKVTLVLDT 122

Human BVR-B catalyzes pyridine nucleotide-dependent production of bilirubin-IX beta during fetal development; in the adult BVR-B has flavin and ferric reductase activities. Human BVR-B catalyzes the reduction of FMN, FAD, and riboflavin. Recognition of flavin occurs mostly by hydrophobic interactions, accounting for the broad substrate specificity. Atypical SDRs are distinct from classical SDRs. BVR-B does not share the key catalytic triad, or conserved tyrosine typical of SDRs. The glycine-rich NADP-binding motif of BVR-B is GXXGXXG, which is similar but not identical to the pattern seen in extended SDRs. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 207

>gnl|CDD|178298 PLN02695, PLN02695, GDP-D-mannose-3',5'-epimerase

 Score = 50.6 bits (121), Expect = 2e-07
 Identities = 34/127 (26%), Positives = 58/127 (45%), Gaps = 10/127 (7%)

Query: 4   EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCD-EKNAHLKKLEGASENLQLFK 62
            +K R+C+TGAGG+IAS + + L  +G+ +        D +KN H+ +     E      
Sbjct: 19  SEKLRICITGAGGFIASHIARRLKAEGHYIIA-----SDWKKNEHMSEDMFCHE---FHL 70

Query: 63  TDLLDYEALCAATAGCTGVFHVACPV-PVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVK 121
            DL   E     T G   VF++A  +  +G + +    ++    + + N+L +     VK
Sbjct: 71  VDLRVMENCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEAARINGVK 130

Query: 122 RVVVVSS 128
           R    SS
Sbjct: 131 RFFYASS 137

Length = 370

>gnl|CDD|223774 COG0702, COG0702, Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 49.9 bits (119), Expect = 3e-07
 Identities = 32/124 (25%), Positives = 54/124 (43%), Gaps = 15/124 (12%)

Query: 8   RVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLD 67
           ++ VTGA G++   +V+ LL +G+ V   VR+P        +     +  +++   DL D
Sbjct: 2   KILVTGATGFVGGAVVRELLARGHEVRAAVRNP--------EAAAALAGGVEVVLGDLRD 53

Query: 68  YEALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVS 127
            ++L A   G  GV  ++  +  G      VQ     V        +   A VK  V +S
Sbjct: 54  PKSLVAGAKGVDGVLLIS-GLLDGSDAFRAVQ-----VTAVVRAAEA-AGAGVKHGVSLS 106

Query: 128 SIGA 131
            +GA
Sbjct: 107 VLGA 110

Length = 275

>gnl|CDD|187673 cd09813, 3b-HSD-NSDHL-like_SDR_e, human NSDHL (NAD(P)H steroid dehydrogenase-like protein)-like, extended (e) SDRs

 Score = 49.7 bits (119), Expect = 4e-07
 Identities = 50/202 (24%), Positives = 75/202 (37%), Gaps = 41/202 (20%)

Query: 8   RVCVTGAGGYIASWLVKYLL-LKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLL 66
              V G  G++   LV+ LL      VH  V D         +    +S  +Q    DL 
Sbjct: 1   SCLVVGGSGFLGRHLVEQLLRRGNPTVH--VFDIRPT----FELDPSSSGRVQFHTGDLT 54

Query: 67  DYEALCAA--TAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVV 124
           D + L  A    G   VFH A P       N ++      V GT+NV+ +C K  VK++V
Sbjct: 55  DPQDLEKAFNEKGPNVVFHTASPDHGS---NDDLYYK-VNVQGTRNVIEACRKCGVKKLV 110

Query: 125 VVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATE---------NYYCLAKTIAEIQALE 175
             SS   V                ++ ++     E         + Y   K +AE   L+
Sbjct: 111 YTSSASVV----------------FNGQDIINGDESLPYPDKHQDAYNETKALAEKLVLK 154

Query: 176 YAKRGELDIVTVC--PSIVIGP 195
            A   E  ++T    P+ + GP
Sbjct: 155 -ANDPESGLLTCALRPAGIFGP 175

This subgroup includes human NSDHL and related proteins. These proteins have the characteristic active site tetrad of extended SDRs, and also have a close match to their NAD(P)-binding motif. Human NSDHL is a 3beta-hydroxysteroid dehydrogenase (3 beta-HSD) which functions in the cholesterol biosynthetic pathway. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. Mutations in the gene encoding NSDHL cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. This subgroup also includes an unusual bifunctional [3beta-hydroxysteroid dehydrogenase (3b-HSD)/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 335

>gnl|CDD|177883 PLN02240, PLN02240, UDP-glucose 4-epimerase

 Score = 49.6 bits (119), Expect = 4e-07
 Identities = 50/136 (36%), Positives = 62/136 (45%), Gaps = 12/136 (8%)

Query: 1   MSGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRD----PCDEKNAHLKKLEGA-S 55
           MS   +  + VTG  GYI S  V  LLL GY V   V D      +E    +K+L G   
Sbjct: 1   MSLMGR-TILVTGGAGYIGSHTVLQLLLAGYKVV--VIDNLDNSSEEALRRVKELAGDLG 57

Query: 56  ENLQLFKTDLLDYEALCAATAGCT--GVFHVACPVPVGK-VPNPEVQLIDPAVVGTKNVL 112
           +NL   K DL D EAL    A      V H A    VG+ V  P +   D  +VGT N+L
Sbjct: 58  DNLVFHKVDLRDKEALEKVFASTRFDAVIHFAGLKAVGESVAKP-LLYYDNNLVGTINLL 116

Query: 113 NSCVKAKVKRVVVVSS 128
               K   K++V  SS
Sbjct: 117 EVMAKHGCKKLVFSSS 132

Length = 352

>gnl|CDD|187574 cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase (G4E), subgroup 5, extended (e) SDRs

 Score = 49.2 bits (118), Expect = 4e-07
 Identities = 37/130 (28%), Positives = 52/130 (40%), Gaps = 10/130 (7%)

Query: 8   RVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLD 67
           RV + G  G+I S LV  LL +G  V   V D        +   E     +   K D  +
Sbjct: 1   RVLIVGGNGFIGSHLVDALLEEGPQV--RVFD------RSIPPYELPLGGVDYIKGDYEN 52

Query: 68  YEALCAATAGCTGVFHVAC-PVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVV 126
              L +A  G   V H+A    P     NP +  I   V  T  +L +C  A + +++  
Sbjct: 53  RADLESALVGIDTVIHLASTTNPATSNKNPILD-IQTNVAPTVQLLEACAAAGIGKIIFA 111

Query: 127 SSIGAVMLNP 136
           SS G V   P
Sbjct: 112 SSGGTVYGVP 121

This subgroup partially conserves the characteristic active site tetrad and NAD-binding motif of the extended SDRs, and has been identified as possible UDP-glucose 4-epimerase (aka UDP-galactose 4-epimerase), a homodimeric member of the extended SDR family. UDP-glucose 4-epimerase catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 300

>gnl|CDD|187542 cd05231, NmrA_TMR_like_1_SDR_a, NmrA (a transcriptional regulator) and triphenylmethane reductase (TMR) like proteins, subgroup 1, atypical (a) SDRs

 Score = 49.2 bits (118), Expect = 5e-07
 Identities = 47/134 (35%), Positives = 60/134 (44%), Gaps = 19/134 (14%)

Query: 11  VTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEA 70
           VTGA G I S +   LL  G  V   VR    E+ A L    GA    ++   DL D   
Sbjct: 3   VTGATGRIGSKVATTLLEAGRPVRALVRSD--ERAAALAAR-GA----EVVVGDLDDPAV 55

Query: 71  LCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVK-AKVKRVVVVSSI 129
           L AA AG   VF +A P P       + +   P  V       S ++ A VKRVV +SS+
Sbjct: 56  LAAALAGVDAVFFLAPPAP-----TADAR---PGYVQAAEAFASALREAGVKRVVNLSSV 107

Query: 130 GAVMLNPNWPKGQV 143
           GA   +P  P G +
Sbjct: 108 GA---DPESPSGLI 118

Atypical SDRs related to NMRa, TMR, and HSCARG (an NADPH sensor). This subgroup resembles the SDRs and has a partially conserved characteristic [ST]GXXGXXG NAD-binding motif, but lacks the conserved active site residues. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Atypical SDRs are distinct from classical SDRs. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 259

>gnl|CDD|213592 TIGR01179, galE, UDP-glucose-4-epimerase GalE

 Score = 48.9 bits (117), Expect = 7e-07
 Identities = 40/138 (28%), Positives = 58/138 (42%), Gaps = 19/138 (13%)

Query: 8   RVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNA-HLKKLEGASENLQLFKTDLL 66
           ++ VTG  GYI S  V+ LL  G+ V   + D     +   L + E  +  +   + DL 
Sbjct: 1   KILVTGGAGYIGSHTVRQLLESGHEV--VILDNLSNGSREALPRGERITP-VTFVEGDLR 57

Query: 67  DYEALCA--ATAGCTGVFHVACPVPVGKVPNPEVQLIDPA------VVGTKNVLNSCVKA 118
           D E L           V H A  + VG+       +  P       VVGT N+L +  +A
Sbjct: 58  DRELLDRLFEEHKIDAVIHFAGLIAVGE------SVQKPLKYYRNNVVGTLNLLEAMQQA 111

Query: 119 KVKRVVVVSSIGAVMLNP 136
            VK+  + SS  AV   P
Sbjct: 112 GVKK-FIFSSSAAVYGEP 128

Alternate name: UDPgalactose 4-epimerase This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from This model and described by a separate model [Energy metabolism, Sugars]. Length = 328

>gnl|CDD|212491 cd05233, SDR_c, classical (c) SDRs

 Score = 47.7 bits (114), Expect = 1e-06
 Identities = 41/212 (19%), Positives = 67/212 (31%), Gaps = 43/212 (20%)

Query: 9   VCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLD- 67
             VTGA   I   + + L  +G  V    R+   E  A L  +E    N    + D+ D 
Sbjct: 1   ALVTGASSGIGRAIARRLAREGAKVVLADRNE--EALAELAAIEALGGNAVAVQADVSDE 58

Query: 68  ------YEALCAATAGCTGVFHVAC---PVPVGKVPNPEVQL-----IDPAVVGTKNVLN 113
                  E           + + A    P P+ ++ + +        +    + T+  L 
Sbjct: 59  EDVEALVEEALEEFGRLDILVNNAGIARPGPLEELTDEDWDRVLDVNLTGVFLLTRAALP 118

Query: 114 SCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAK----TIA 169
              K    R+V +SS+  +   P                         Y  +K     + 
Sbjct: 119 HMKKQGGGRIVNISSVAGLRPLPGQA---------------------AYAASKAALEGLT 157

Query: 170 EIQALEYAKRGELDIVTVCPSIVIGPMLQPTI 201
              ALE A  G + +  V P +V  PML    
Sbjct: 158 RSLALELAPYG-IRVNAVAPGLVDTPMLAKLG 188

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 234

>gnl|CDD|224011 COG1086, COG1086, Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 48.0 bits (115), Expect = 2e-06
 Identities = 44/146 (30%), Positives = 64/146 (43%), Gaps = 32/146 (21%)

Query: 8   RVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPC-------DEKNAHL--KKLEGASENL 58
            V VTG GG I S L + +L           +P        DE   +L   +L      L
Sbjct: 252 TVLVTGGGGSIGSELCRQILK---------FNPKEIILFSRDEYKLYLIDMELREKFPEL 302

Query: 59  QL--FKTDLLDYEALCAA--TAGCTGVFHVACPVPVGKVP----NPEVQLIDPAVVGTKN 110
           +L  +  D+ D + +  A        VFH A    +  VP    NPE + I   V+GT+N
Sbjct: 303 KLRFYIGDVRDRDRVERAMEGHKVDIVFHAAA---LKHVPLVEYNPE-EAIKTNVLGTEN 358

Query: 111 VLNSCVKAKVKRVVVVSSIGAVMLNP 136
           V  + +K  VK+ V++S+  AV  NP
Sbjct: 359 VAEAAIKNGVKKFVLISTDKAV--NP 382

Length = 588

>gnl|CDD|187557 cd05246, dTDP_GD_SDR_e, dTDP-D-glucose 4,6-dehydratase, extended (e) SDRs

 Score = 47.5 bits (114), Expect = 2e-06
 Identities = 50/212 (23%), Positives = 75/212 (35%), Gaps = 54/212 (25%)

Query: 8   RVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDP---CDEKNAHLKKLE--GASENLQLFK 62
           ++ VTG  G+I S  V+YLL K         D          +L+ LE   +S   +  K
Sbjct: 2   KILVTGGAGFIGSNFVRYLLNKYPDYKIINLDKLTYA----GNLENLEDVSSSPRYRFVK 57

Query: 63  TDLLDYEALCA--ATAGCTGVFHVA----------CPVPVGKVPNPEVQLIDPAVVGTKN 110
            D+ D E +           V H A           P P  +  N         V+GT  
Sbjct: 58  GDICDAELVDRLFEEEKIDAVIHFAAESHVDRSISDPEPFIRT-N---------VLGTYT 107

Query: 111 VLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDE---ECWSDEEFCKATE----NYYC 163
           +L +  K  VKR V +S+                DE   +   D EF + +     + Y 
Sbjct: 108 LLEAARKYGVKRFVHIST----------------DEVYGDLLDDGEFTETSPLAPTSPYS 151

Query: 164 LAKTIAEIQALEYAKRGELDIVTVCPSIVIGP 195
            +K  A++    Y +   L +V    S   GP
Sbjct: 152 ASKAAADLLVRAYHRTYGLPVVITRCSNNYGP 183

This subgroup contains dTDP-D-glucose 4,6-dehydratase and related proteins, members of the extended-SDR family, with the characteristic Rossmann fold core region, active site tetrad and NAD(P)-binding motif. dTDP-D-glucose 4,6-dehydratase is closely related to other sugar epimerases of the SDR family. dTDP-D-dlucose 4,6,-dehydratase catalyzes the second of four steps in the dTDP-L-rhamnose pathway (the dehydration of dTDP-D-glucose to dTDP-4-keto-6-deoxy-D-glucose) in the synthesis of L-rhamnose, a cell wall component of some pathogenic bacteria. In many gram negative bacteria, L-rhamnose is an important constituent of lipopoylsaccharide O-antigen. The larger N-terminal portion of dTDP-D-Glucose 4,6-dehydratase forms a Rossmann fold NAD-binding domain, while the C-terminus binds the sugar substrate. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 315

>gnl|CDD|187541 cd05230, UGD_SDR_e, UDP-glucuronate decarboxylase (UGD) and related proteins, extended (e) SDRs

 Score = 46.9 bits (112), Expect = 3e-06
 Identities = 28/107 (26%), Positives = 51/107 (47%), Gaps = 9/107 (8%)

Query: 7   ERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLL 66
           +R+ +TG  G++ S L   LL  G+ V   V +    +  +++ L G   N +  + D+ 
Sbjct: 1   KRILITGGAGFLGSHLCDRLLEDGHEVIC-VDNFFTGRKRNIEHLIGH-PNFEFIRHDVT 58

Query: 67  DYEALCAATAGCTGVFHVACPV-PVGKVPNPEVQLIDPAVVGTKNVL 112
           +             ++H+ACP  PV    NP ++ +   V+GT N+L
Sbjct: 59  EPL-----YLEVDQIYHLACPASPVHYQYNP-IKTLKTNVLGTLNML 99

UGD catalyzes the formation of UDP-xylose from UDP-glucuronate; it is an extended-SDR, and has the characteristic glycine-rich NAD-binding pattern, TGXXGXXG, and active site tetrad. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305

>gnl|CDD|219687 pfam07993, NAD_binding_4, Male sterility protein

 Score = 46.1 bits (110), Expect = 4e-06
 Identities = 55/235 (23%), Positives = 85/235 (36%), Gaps = 48/235 (20%)

Query: 11  VTGAGGYIASWLVKYLL--LKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLL-- 66
           +TGA G++   L++ LL       ++  VR   D ++A L++L        LF       
Sbjct: 1   LTGATGFLGKVLLEKLLRSTPEVKIYCLVR-AKDGESA-LERLRQELLKYGLFDRLKALE 58

Query: 67  -------------------DYEALCAATAGCTGVFHVACPVPVGKVPN---PEVQLIDPA 104
                              D++ L         + H A  V      N   P   L    
Sbjct: 59  RIIPVAGDLSEPNLGLSDEDFQELAE---EVDVIIHNAATV------NFVEPYSDLRATN 109

Query: 105 VVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKAT----EN 160
           V+GT+ VL    + K      VS+  A +   N  +G +++E+ +  +E   A      N
Sbjct: 110 VLGTREVLRLAKQMKKLPFHHVST--AYV---NGERGGLLEEKPYKLDEDEPALLGGLPN 164

Query: 161 YYCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKGF 215
            Y  +K +AE    E    G L +V   PSI+ G      IN       G L G 
Sbjct: 165 GYTQSKWLAEQLVREA--AGGLPVVIYRPSIITGESRTGWINGDDFGPRGLLGGA 217

This family represents the C-terminal region of the male sterility protein in a number of arabidopsis and drosophila. A sequence-related jojoba acyl CoA reductase is also included. Length = 245

>gnl|CDD|187556 cd05245, SDR_a2, atypical (a) SDRs, subgroup 2

 Score = 46.2 bits (110), Expect = 6e-06
 Identities = 31/123 (25%), Positives = 51/123 (41%), Gaps = 12/123 (9%)

Query: 9   VCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDY 68
           V VTGA GY+   LV  LL +G+ V   VR P ++           SE + + + DL D 
Sbjct: 1   VLVTGATGYVGGRLVPRLLQEGHQVRALVRSP-EKLADRPW-----SERVTVVRGDLEDP 54

Query: 69  EALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSS 128
           E+L AA  G    +++   +             +      +N   +   A VKR++ +  
Sbjct: 55  ESLRAALEGIDTAYYLVHSM------GSGGDFEEADRRAARNFARAARAAGVKRIIYLGG 108

Query: 129 IGA 131
           +  
Sbjct: 109 LIP 111

This subgroup contains atypical SDRs, one member is identified as Escherichia coli protein ybjT, function unknown. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that generally matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|235546 PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score = 45.5 bits (109), Expect = 8e-06
 Identities = 47/216 (21%), Positives = 72/216 (33%), Gaps = 54/216 (25%)

Query: 8   RVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLD 67
              VTGA   I   +   L   G  V     +  +   A   +L  A    ++   D+ D
Sbjct: 7   TALVTGASRGIGRAIALRLAADGAKVVIYDSNE-EAAEALAAELRAAGGEARVLVFDVSD 65

Query: 68  YEALCAATA-------GCTGVFHVACPVPVGKVPN--PEV--QLIDPAVVGTKNVLNSCV 116
             A+ A              + + A       +P    E   ++ID  + GT NV+ + +
Sbjct: 66  EAAVRALIEAAVEAFGALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAAL 125

Query: 117 KAKVK----RVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYC-------LA 165
              +K    R+V +SS+  V  NP    GQ                 NY           
Sbjct: 126 PPMIKARYGRIVNISSVSGVTGNP----GQT----------------NYSAAKAGVIGFT 165

Query: 166 KTIAEIQALEYAKRGELDIVTV---CPSIVIGPMLQ 198
           K +    ALE A RG    +TV    P  +   M +
Sbjct: 166 KAL----ALELASRG----ITVNAVAPGFIDTDMTE 193

Length = 246

>gnl|CDD|187546 cd05235, SDR_e1, extended (e) SDRs, subgroup 1

 Score = 45.3 bits (108), Expect = 1e-05
 Identities = 27/112 (24%), Positives = 39/112 (34%), Gaps = 7/112 (6%)

Query: 105 VVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCL 164
           V+GTK +L      K+K +  VS++             + DEE     E      N Y  
Sbjct: 114 VLGTKELLKLAATGKLKPLHFVSTLSVF---SAEEYNALDDEESDDMLESQNGLPNGYIQ 170

Query: 165 AKTIAEIQALEYAKRGELDIVTV-CPSIVIGPMLQPTINTSSLLLLGFLKGF 215
           +K +AE    E A RG L +  +   +I                    LKG 
Sbjct: 171 SKWVAEKLLREAANRG-LPVAIIRPGNIFGDSETGIGNTDDFFWR--LLKGC 219

This family consists of an SDR module of multidomain proteins identified as putative polyketide sythases fatty acid synthases (FAS), and nonribosomal peptide synthases, among others. However, unlike the usual ketoreductase modules of FAS and polyketide synthase, these domains are related to the extended SDRs, and have canonical NAD(P)-binding motifs and an active site tetrad. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 290

>gnl|CDD|200381 TIGR04130, FnlA, UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase

 Score = 45.4 bits (107), Expect = 1e-05
 Identities = 29/94 (30%), Positives = 51/94 (54%), Gaps = 6/94 (6%)

Query: 42  DEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFHVACPVPVGKVPNPE---V 98
           DEK     + +  +  L+ +  D+ DY ++  AT G   ++H A    + +VP+ E   +
Sbjct: 38  DEKKQDDMRKKYNNSKLKFYIGDVRDYRSILNATRGVDFIYHAAA---LKQVPSCEFHPM 94

Query: 99  QLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAV 132
           + +   V+GT+NVL + +   VKRVV +S+  AV
Sbjct: 95  EAVKTNVLGTENVLEAAIANGVKRVVCLSTDKAV 128

The FnlA enzyme is the first step in the biosynthesis of UDP-FucNAc from UDP-GlcNAc in E. coli (along with FnlB and FnlC). The proteins identified by this model include FnlA homologs in the O-antigen clusters of O4, O25, O26, O29 (Shigella D11), O118, O145 and O172 serotype strains, all of which produce O-antigens containing FucNAc (or the further modified FucNAm). A homolog from Pseudomonas aerugiosa serotype O11, WbjB, also involved in the biosynthesis of UDP-FucNAc has been characterized and is now believed to carry out both the initial 4,6-dehydratase reaction and the subsequent epimerization of the resulting methyl group at C-5. A phylogenetic tree of related sequences shows a distinct clade of enzymes involved in the biosynthesis of UDP-QuiNAc (Qui=qinovosamine). This clade appears to be descendant from the common ancestor of the Pseudomonas and E. coli fucose-biosynthesis enzymes. It has been hypothesized that the first step in the biosynthesis of these two compounds may be the same, and thus that these enzymes all have the same function. At present, lacking sufficient confirmation of this, the current model trusted cutoff only covers the tree segment surrounding the E. coli genes. The clades containing the Pseudomonas and QuiNAc biosynthesis enzymes score above the noise cutoff. Immediately below the noise cutoff are enzymes involved in the biosynthesis of UDP-RhaNAc (Rha=rhamnose), which again may or may not produce the same product. Length = 337

>gnl|CDD|224014 COG1089, Gmd, GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

 Score = 44.7 bits (106), Expect = 2e-05
 Identities = 22/68 (32%), Positives = 28/68 (41%), Gaps = 3/68 (4%)

Query: 8  RVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCD--EKNAHLKKLEGASE-NLQLFKTD 64
             +TG  G   S+L + LL KGY VHG  R          HL +    ++  L L   D
Sbjct: 4  VALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGD 63

Query: 65 LLDYEALC 72
          L D   L 
Sbjct: 64 LTDSSNLL 71

Length = 345

>gnl|CDD|187632 cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score = 44.5 bits (106), Expect = 2e-05
 Identities = 36/144 (25%), Positives = 57/144 (39%), Gaps = 21/144 (14%)

Query: 11  VTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGA-SENLQLFKTDLLDYE 69
           +TG    I   L   L  +GY V  T R+P       L+ L    ++NL++ + D+ D E
Sbjct: 5   ITGCSSGIGLALALALAAQGYRVIATARNP-----DKLESLGELLNDNLEVLELDVTDEE 59

Query: 70  ALCAATAGCTGVFH----------VACPVPVGKVPNPEV-QLIDPAVVG----TKNVLNS 114
           ++ AA       F                P+ +    EV +L +  V G    T+  L  
Sbjct: 60  SIKAAVKEVIERFGRIDVLVNNAGYGLFGPLEETSIEEVRELFEVNVFGPLRVTRAFLPL 119

Query: 115 CVKAKVKRVVVVSSIGAVMLNPNW 138
             K    R+V VSS+  ++  P  
Sbjct: 120 MRKQGSGRIVNVSSVAGLVPTPFL 143

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|233954 TIGR02622, CDP_4_6_dhtase, CDP-glucose 4,6-dehydratase

 Score = 44.6 bits (106), Expect = 2e-05
 Identities = 38/138 (27%), Positives = 57/138 (41%), Gaps = 4/138 (2%)

Query: 6   KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDL 65
            ++V VTG  G+  SWL  +LL  G  V+G   DP        + L  A + ++    D+
Sbjct: 4   GKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDP-PTSPNLFELLNLA-KKIEDHFGDI 61

Query: 66  LDYEALCAATAGCTG--VFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRV 123
            D   L  A A      VFH+A    V K     ++  +  V+GT N+L +       + 
Sbjct: 62  RDAAKLRKAIAEFKPEIVFHLAAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKA 121

Query: 124 VVVSSIGAVMLNPNWPKG 141
           VV  +      N  W  G
Sbjct: 122 VVNVTSDKCYRNDEWVWG 139

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 349

>gnl|CDD|187568 cd05258, CDP_TE_SDR_e, CDP-tyvelose 2-epimerase, extended (e) SDRs

 Score = 44.6 bits (106), Expect = 2e-05
 Identities = 26/125 (20%), Positives = 45/125 (36%), Gaps = 4/125 (3%)

Query: 7   ERVCVTGAGGYIASWLVKYLLLKGYMVHG--TVRDPCDEKNAHLKKLEGASENLQLFKTD 64
            RV +TG  G+I S L ++ L +G+ V G   +       N    K       ++    D
Sbjct: 1   MRVLITGGAGFIGSNLARFFLKQGWEVIGFDNLMRRGSFGNLAWLKANREDGGVRFVHGD 60

Query: 65  LLDYEALCAATAGCTGVFHVACPVPVGK-VPNPEVQLIDPAVVGTKNVLNSCVKAKVKRV 123
           + +   L         + H A    V     +P     +   +GT NVL +  +      
Sbjct: 61  IRNRNDLEDLFEDIDLIIHTAAQPSVTTSASSPR-LDFETNALGTLNVLEAARQHAPNAP 119

Query: 124 VVVSS 128
            + +S
Sbjct: 120 FIFTS 124

CDP-tyvelose 2-epimerase is a tetrameric SDR that catalyzes the conversion of CDP-D-paratose to CDP-D-tyvelose, the last step in tyvelose biosynthesis. This subgroup is a member of the extended SDR subfamily, with a characteristic active site tetrad and NAD-binding motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 337

>gnl|CDD|187549 cd05238, Gne_like_SDR_e, Escherichia coli Gne (a nucleoside-diphosphate-sugar 4-epimerase)-like, extended (e) SDRs

 Score = 44.3 bits (105), Expect = 2e-05
 Identities = 44/195 (22%), Positives = 74/195 (37%), Gaps = 28/195 (14%)

Query: 8   RVCVTGAGGYIASWLVKYLLLKGYMVHGTVRD---PCDEKNA-HLKKLEGASENLQLFKT 63
           +V +TGA G++   L + LL         + D   P     A  + ++ G          
Sbjct: 2   KVLITGASGFVGQRLAERLLSDVPNERLILIDVVSPKAPSGAPRVTQIAG---------- 51

Query: 64  DLLDYEALCAATAG-CTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKA-KVK 121
           DL     + A   G    VFH+A  V  G   + ++      V GT+N+L +  K     
Sbjct: 52  DLAVPALIEALANGRPDVVFHLAAIVSGGAEADFDLGY-RVNVDGTRNLLEALRKNGPKP 110

Query: 122 RVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKRGE 181
           R V  SS+    L    P            +       + Y   K + E+   +Y++RG 
Sbjct: 111 RFVFTSSLAVYGLPL--PNP--------VTDHTALDPASSYGAQKAMCELLLNDYSRRGF 160

Query: 182 LDIVTV-CPSIVIGP 195
           +D  T+  P++ + P
Sbjct: 161 VDGRTLRLPTVCVRP 175

Nucleoside-diphosphate-sugar 4-epimerase has the characteristic active site tetrad and NAD-binding motif of the extended SDR, and is related to more specifically defined epimerases such as UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), which catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup includes Escherichia coli 055:H7 Gne, a UDP-GlcNAc 4-epimerase, essential for O55 antigen synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305

>gnl|CDD|225857 COG3320, COG3320, Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

 Score = 44.3 bits (105), Expect = 2e-05
 Identities = 55/233 (23%), Positives = 86/233 (36%), Gaps = 40/233 (17%)

Query: 8   RVCVTGAGGYIASWLVKYLLLKGYM---VHGTVRDPCDEKNAHLKKL-----------EG 53
            V +TGA G++ ++L+  LL        V   VR   DE  A L +L           E 
Sbjct: 2   NVLLTGATGFLGAYLLLELL--DRSDAKVICLVRAQSDE--AALARLEKTFDLYRHWDEL 57

Query: 54  ASENLQLFKTDL---------LDYEALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPA 104
           +++ +++   DL           ++ L A       + H A  V       P  +L    
Sbjct: 58  SADRVEVVAGDLAEPDLGLSERTWQEL-AENVDL--IIHNAALVNHVF---PYSELRGAN 111

Query: 105 VVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDE-EFCKATENYYC 163
           V+GT  VL      K K +  VSSI        +     +D +  S      +     Y 
Sbjct: 112 VLGTAEVLRLAATGKPKPLHYVSSISV--GETEYYSNFTVDFDEISPTRNVGQGLAGGYG 169

Query: 164 LAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTINTS---SLLLLGFLK 213
            +K +AE    E   RG L +    P  + G      +NT    + L+LG L+
Sbjct: 170 RSKWVAEKLVREAGDRG-LPVTIFRPGYITGDSRTGALNTRDFLTRLVLGLLQ 221

Length = 382

>gnl|CDD|215072 PLN00141, PLN00141, Tic62-NAD(P)-related group II protein; Provisional

 Score = 43.3 bits (102), Expect = 4e-05
 Identities = 47/149 (31%), Positives = 64/149 (42%), Gaps = 37/149 (24%)

Query: 6   KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDL 65
            + V V GA G     +V+ LL KG+ V   VRD  D+    L +      +LQ+ + D+
Sbjct: 17  TKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRD-VDKAKTSLPQ----DPSLQIVRADV 71

Query: 66  L------------DYEALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLN 113
                        D +A+  AT G    F    P    KV N           GT N++ 
Sbjct: 72  TEGSDKLVEAIGDDSDAVICAT-GFRRSFDPFAP---WKVDN----------FGTVNLVE 117

Query: 114 SCVKAKVKRVVVVSSI---GAVM---LNP 136
           +C KA V R ++VSSI   GA M   LNP
Sbjct: 118 ACRKAGVTRFILVSSILVNGAAMGQILNP 146

Length = 251

>gnl|CDD|187579 cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, subunit 9, 39 kDa, (NDUFA9) -like, atypical (a) SDRs

 Score = 42.6 bits (101), Expect = 7e-05
 Identities = 32/125 (25%), Positives = 55/125 (44%), Gaps = 9/125 (7%)

Query: 8   RVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLD 67
            V V GA G+I  ++V  L  +G  V    R  C+     L  + G    +   + DL D
Sbjct: 2   VVTVFGATGFIGRYVVNRLAKRGSQVIVPYR--CEAYARRL-LVMGDLGQVLFVEFDLRD 58

Query: 68  YEALCAATAGCTGVFHVACPVPVGKV-PNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVV 126
            E++  A  G   V  +     VG++         D  V G + +  +  +A V+R++ +
Sbjct: 59  DESIRKALEGSDVV--INL---VGRLYETKNFSFEDVHVEGPERLAKAAKEAGVERLIHI 113

Query: 127 SSIGA 131
           S++GA
Sbjct: 114 SALGA 118

This subgroup of extended SDR-like proteins are atypical SDRs. They have a glycine-rich NAD(P)-binding motif similar to the typical SDRs, GXXGXXG, and have the YXXXK active site motif (though not the other residues of the SDR tetrad). Members identified include NDUFA9 (mitochondrial) and putative nucleoside-diphosphate-sugar epimerase. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 273

>gnl|CDD|191263 pfam05368, NmrA, NmrA-like family

 Score = 41.9 bits (99), Expect = 1e-04
 Identities = 38/120 (31%), Positives = 51/120 (42%), Gaps = 15/120 (12%)

Query: 9   VCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDY 68
           + V GA GY    +V+  L  G+ V   VRDP  E    LK   G     +L + DL D+
Sbjct: 1   ILVFGATGYQGGSVVRASLKAGHPVRALVRDPKSELAKSLKAA-GV----ELVEGDLDDH 55

Query: 69  EALCAATAGCTGVFHVACPVPVGKVPNPEVQ----LIDPAV-VGTKNVLNSCVKAKVKRV 123
           E+L  A  G   VF V      G   + E++    L D A   G K+ + S     V R 
Sbjct: 56  ESLVEALKGVDVVFSV-----TGFWLSKEIEDGKKLADAAKEAGVKHFIPSEFGNDVDRS 110

NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families. Length = 232

>gnl|CDD|187550 cd05239, GDP_FS_SDR_e, GDP-fucose synthetase, extended (e) SDRs

 Score = 40.3 bits (95), Expect = 4e-04
 Identities = 45/194 (23%), Positives = 74/194 (38%), Gaps = 35/194 (18%)

Query: 8   RVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLD 67
           ++ VTG  G + S +V+ L  +GY  +   R   +                     DL D
Sbjct: 1   KILVTGHRGLVGSAIVRVLARRGY-ENVVFRTSKE--------------------LDLTD 39

Query: 68  YEALCAATA--GCTGVFHVACPV--PVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRV 123
            EA+ A         V H+A  V   V  +  P   L D  ++   NV+++  +  VK++
Sbjct: 40  QEAVRAFFEKEKPDYVIHLAAKVGGIVANMTYPADFLRDNLLIND-NVIHAAHRFGVKKL 98

Query: 124 VVVSSIGAVMLNPNWPK--GQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKRGE 181
           V + S         +P    Q +DE         + T   Y +AK         Y K+  
Sbjct: 99  VFLGSSCI------YPDLAPQPIDESDLLTGPP-EPTNEGYAIAKRAGLKLCEAYRKQYG 151

Query: 182 LDIVTVCPSIVIGP 195
            D ++V P+ + GP
Sbjct: 152 CDYISVMPTNLYGP 165

GDP-fucose synthetase (aka 3, 5-epimerase-4-reductase) acts in the NADP-dependent synthesis of GDP-fucose from GDP-mannose. Two activities have been proposed for the same active site: epimerization and reduction. Proteins in this subgroup are extended SDRs, which have a characteristic active site tetrad and an NADP-binding motif, [AT]GXXGXXG, that is a close match to the archetypical form. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 300

>gnl|CDD|235630 PRK05865, PRK05865, hypothetical protein; Provisional

 Score = 40.0 bits (93), Expect = 8e-04
 Identities = 32/121 (26%), Positives = 46/121 (38%), Gaps = 19/121 (15%)

Query: 8   RVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLD 67
           R+ VTGA G +   L   LL +G+ V G  R   D   +    +            D+ D
Sbjct: 2   RIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDSWPSSADFIAA----------DIRD 51

Query: 68  YEALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVS 127
             A+ +A  G   V H A       V      +    + GT NVL +  +    R+V  S
Sbjct: 52  ATAVESAMTGADVVAHCAW------VRGRNDHI---NIDGTANVLKAMAETGTGRIVFTS 102

Query: 128 S 128
           S
Sbjct: 103 S 103

Length = 854

>gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

 Score = 39.0 bits (91), Expect = 0.001
 Identities = 39/208 (18%), Positives = 66/208 (31%), Gaps = 42/208 (20%)

Query: 11  VTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKL--EGASENLQLFKTDLLDY 68
           VTGA   I   + + L  +G  V    R   +E    L     E           D+ D 
Sbjct: 10  VTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDD 69

Query: 69  EALCAATA--------GCTGVFHVA----CPVPVGKVPNPEVQ-LIDPAVVGTKNVLNSC 115
           E    A              + + A       P+ ++   +   +ID  ++G   +  + 
Sbjct: 70  EESVEALVAAAEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAA 129

Query: 116 VKAKVK-RVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAK----TIAE 170
           +    K R+V +SS+  +   P                         Y  +K     + +
Sbjct: 130 LPLMKKQRIVNISSVAGLGGPPGQA---------------------AYAASKAALIGLTK 168

Query: 171 IQALEYAKRGELDIVTVCPSIVIGPMLQ 198
             ALE A RG + +  V P  +  PM  
Sbjct: 169 ALALELAPRG-IRVNAVAPGYIDTPMTA 195

Length = 251

>gnl|CDD|187540 cd05229, SDR_a3, atypical (a) SDRs, subgroup 3

 Score = 38.8 bits (91), Expect = 0.001
 Identities = 28/148 (18%), Positives = 52/148 (35%), Gaps = 36/148 (24%)

Query: 11  VTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEA 70
           V GA G I   + + L  +G+ V    R           KL      +++   D +D  +
Sbjct: 4   VLGASGPIGREVARELRRRGWDVRLVSRSG--------SKLA-WLPGVEIVAADAMDASS 54

Query: 71  LCAATAGCTGVFHVACP---VPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVS 127
           + AA  G   ++H A P         P     L++  V           +A   ++V+  
Sbjct: 55  VIAAARGADVIYHCANPAYTRWEELFP----PLMENVVAA--------AEANGAKLVLPG 102

Query: 128 SI-------GAVM-----LNPNWPKGQV 143
           ++       G+ +       P   KG++
Sbjct: 103 NVYMYGPQAGSPITEDTPFQPTTRKGRI 130

These atypical SDR family members of unknown function have a glycine-rich NAD(P)-binding motif consensus that is very similar to the extended SDRs, GXXGXXG. Generally, this group has poor conservation of the active site tetrad, However, individual sequences do contain matches to the YXXXK active site motif, and generally Tyr or Asn in place of the upstream Ser found in most SDRs. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 302

>gnl|CDD|225462 COG2910, COG2910, Putative NADH-flavin reductase [General function prediction only]

 Score = 37.7 bits (88), Expect = 0.002
 Identities = 39/193 (20%), Positives = 70/193 (36%), Gaps = 39/193 (20%)

Query: 8   RVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLD 67
           ++ + GA G   S ++K  L +G+ V   VR+              A + + + + D+ D
Sbjct: 2   KIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLA---------ARQGVTILQKDIFD 52

Query: 68  YEALCAATAGCTGV---FHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVK-AKVKRV 123
             +L +  AG   V   F                   D     +   L   +K A V R+
Sbjct: 53  LTSLASDLAGHDAVISAFGAGASDN------------DELHSKSIEALIEALKGAGVPRL 100

Query: 124 VVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKRGE-L 182
           +VV   G++ ++      +++D       +F      Y   A   AE   L+  +  + L
Sbjct: 101 LVVGGAGSLEIDEG---TRLVDT-----PDF---PAEYKPEALAQAE--FLDSLRAEKSL 147

Query: 183 DIVTVCPSIVIGP 195
           D   V P+    P
Sbjct: 148 DWTFVSPAAFFEP 160

Length = 211

>gnl|CDD|165812 PLN02166, PLN02166, dTDP-glucose 4,6-dehydratase

 Score = 37.7 bits (87), Expect = 0.004
 Identities = 35/115 (30%), Positives = 53/115 (46%), Gaps = 17/115 (14%)

Query: 3   GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENL-QLF 61
           G  + R+ VTG  G++ S LV  L+ +G           DE         G  ENL  LF
Sbjct: 117 GRKRLRIVVTGGAGFVGSHLVDKLIGRG-----------DEVIVIDNFFTGRKENLVHLF 165

Query: 62  ---KTDLLDYEALCAATAGCTGVFHVACPV-PVGKVPNPEVQLIDPAVVGTKNVL 112
              + +L+ ++ +         ++H+ACP  PV    NP V+ I   V+GT N+L
Sbjct: 166 GNPRFELIRHDVVEPILLEVDQIYHLACPASPVHYKYNP-VKTIKTNVMGTLNML 219

Length = 436

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	248
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	100.0
PLN02214	342	cinnamoyl-CoA reductase	100.0
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	100.0
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	100.0
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	100.0
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	100.0
PLN00198	338	anthocyanidin reductase; Provisional	100.0
PLN02572	442	UDP-sulfoquinovose synthase	100.0
PLN02427	386	UDP-apiose/xylose synthase	100.0
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	100.0
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	100.0
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	99.98
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	99.98
PLN02650	351	dihydroflavonol-4-reductase	99.97
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	99.97
PLN02583	297	cinnamoyl-CoA reductase	99.97
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	99.97
PRK06114	254	short chain dehydrogenase; Provisional	99.97
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	99.97
PRK07063	260	short chain dehydrogenase; Provisional	99.97
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	99.97
PLN02896	353	cinnamyl-alcohol dehydrogenase	99.97
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.97
PRK05867	253	short chain dehydrogenase; Provisional	99.97
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	99.97
PRK06128	300	oxidoreductase; Provisional	99.97
PRK07478	254	short chain dehydrogenase; Provisional	99.97
PLN02686	367	cinnamoyl-CoA reductase	99.97
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	99.97
PRK08589	272	short chain dehydrogenase; Validated	99.97
PRK08265	261	short chain dehydrogenase; Provisional	99.97
PRK07985	294	oxidoreductase; Provisional	99.97
PRK08339	263	short chain dehydrogenase; Provisional	99.97
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	99.97
PRK12747	252	short chain dehydrogenase; Provisional	99.97
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	99.97
PRK08277	278	D-mannonate oxidoreductase; Provisional	99.97
PRK08085	254	gluconate 5-dehydrogenase; Provisional	99.97
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	99.97
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	99.97
PRK06398	258	aldose dehydrogenase; Validated	99.97
PLN02653	340	GDP-mannose 4,6-dehydratase	99.97
PRK07523	255	gluconate 5-dehydrogenase; Provisional	99.97
PLN02166	436	dTDP-glucose 4,6-dehydratase	99.97
PRK06172	253	short chain dehydrogenase; Provisional	99.96
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	99.96
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.96
PLN02206	442	UDP-glucuronate decarboxylase	99.96
PLN02695	370	GDP-D-mannose-3',5'-epimerase	99.96
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	99.96
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	99.96
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	99.96
PRK12742	237	oxidoreductase; Provisional	99.96
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	99.96
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	99.96
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	99.96
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.96
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.96
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	99.96
PRK07856	252	short chain dehydrogenase; Provisional	99.96
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	99.96
PLN02253	280	xanthoxin dehydrogenase	99.96
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	99.96
PLN02260	668	probable rhamnose biosynthetic enzyme	99.96
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	99.96
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	99.96
PRK08643	256	acetoin reductase; Validated	99.96
PRK07035	252	short chain dehydrogenase; Provisional	99.96
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	99.96
KOG0725	270	consensus Reductases with broad range of substrate	99.96
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.96
PRK08226	263	short chain dehydrogenase; Provisional	99.96
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	99.96
PRK07791	286	short chain dehydrogenase; Provisional	99.96
PLN02240	352	UDP-glucose 4-epimerase	99.96
PRK06500	249	short chain dehydrogenase; Provisional	99.96
PRK07067	257	sorbitol dehydrogenase; Provisional	99.96
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	99.96
PRK07062	265	short chain dehydrogenase; Provisional	99.96
PRK05717	255	oxidoreductase; Validated	99.96
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	99.96
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	99.96
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	99.96
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	99.96
PRK06701	290	short chain dehydrogenase; Provisional	99.96
PRK07677	252	short chain dehydrogenase; Provisional	99.96
PRK08628	258	short chain dehydrogenase; Provisional	99.96
PRK12937	245	short chain dehydrogenase; Provisional	99.96
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.96
PRK12743	256	oxidoreductase; Provisional	99.96
PRK07890	258	short chain dehydrogenase; Provisional	99.96
COG0300	265	DltE Short-chain dehydrogenases of various substra	99.96
PRK06841	255	short chain dehydrogenase; Provisional	99.96
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	99.96
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	99.96
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	99.96
PRK09242	257	tropinone reductase; Provisional	99.95
PRK06124	256	gluconate 5-dehydrogenase; Provisional	99.95
PRK06940	275	short chain dehydrogenase; Provisional	99.95
PRK12938	246	acetyacetyl-CoA reductase; Provisional	99.95
PRK12746	254	short chain dehydrogenase; Provisional	99.95
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.95
PRK08936	261	glucose-1-dehydrogenase; Provisional	99.95
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	99.95
PRK12935	247	acetoacetyl-CoA reductase; Provisional	99.95
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	99.95
PRK08213	259	gluconate 5-dehydrogenase; Provisional	99.95
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.95
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	99.95
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.95
PRK07774	250	short chain dehydrogenase; Provisional	99.95
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	99.95
PRK06138	252	short chain dehydrogenase; Provisional	99.95
PRK12827	249	short chain dehydrogenase; Provisional	99.95
PRK06523	260	short chain dehydrogenase; Provisional	99.95
PRK07097	265	gluconate 5-dehydrogenase; Provisional	99.95
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	99.95
PRK06949	258	short chain dehydrogenase; Provisional	99.95
PRK07814	263	short chain dehydrogenase; Provisional	99.95
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.95
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	99.95
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.95
PRK06123	248	short chain dehydrogenase; Provisional	99.95
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.95
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	99.95
PRK12939	250	short chain dehydrogenase; Provisional	99.95
PRK08340	259	glucose-1-dehydrogenase; Provisional	99.95
PRK07576	264	short chain dehydrogenase; Provisional	99.95
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	99.95
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.95
PRK05884	223	short chain dehydrogenase; Provisional	99.95
PRK10675	338	UDP-galactose-4-epimerase; Provisional	99.95
PRK06125	259	short chain dehydrogenase; Provisional	99.95
PRK06484	520	short chain dehydrogenase; Validated	99.95
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.95
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	99.95
PRK05876	275	short chain dehydrogenase; Provisional	99.95
PRK08703	239	short chain dehydrogenase; Provisional	99.95
PRK07806	248	short chain dehydrogenase; Provisional	99.95
PRK07831	262	short chain dehydrogenase; Provisional	99.95
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	99.95
PRK06483	236	dihydromonapterin reductase; Provisional	99.95
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	99.95
PRK09135	249	pteridine reductase; Provisional	99.94
PRK07060	245	short chain dehydrogenase; Provisional	99.94
PLN02996	491	fatty acyl-CoA reductase	99.94
PRK06194	287	hypothetical protein; Provisional	99.94
PRK12824	245	acetoacetyl-CoA reductase; Provisional	99.94
PRK07453	322	protochlorophyllide oxidoreductase; Validated	99.94
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	99.94
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	99.94
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.94
PRK06947	248	glucose-1-dehydrogenase; Provisional	99.94
PRK12744	257	short chain dehydrogenase; Provisional	99.94
PRK08278	273	short chain dehydrogenase; Provisional	99.94
PRK09134	258	short chain dehydrogenase; Provisional	99.94
PRK06057	255	short chain dehydrogenase; Provisional	99.94
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.94
PRK05875	276	short chain dehydrogenase; Provisional	99.94
PRK09186	256	flagellin modification protein A; Provisional	99.94
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	99.94
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	99.94
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.94
PRK06139	330	short chain dehydrogenase; Provisional	99.94
PRK07069	251	short chain dehydrogenase; Validated	99.94
PRK05854	313	short chain dehydrogenase; Provisional	99.94
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.94
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	99.94
PRK06198	260	short chain dehydrogenase; Provisional	99.94
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.94
PRK07074	257	short chain dehydrogenase; Provisional	99.94
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	99.94
TIGR02415	254	23BDH acetoin reductases. One member of this famil	99.94
PRK07024	257	short chain dehydrogenase; Provisional	99.94
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	99.94
PRK06180	277	short chain dehydrogenase; Provisional	99.93
PRK06182	273	short chain dehydrogenase; Validated	99.93
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	99.93
PRK07577	234	short chain dehydrogenase; Provisional	99.93
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.93
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.93
PRK12828	239	short chain dehydrogenase; Provisional	99.93
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	99.93
PRK06197	306	short chain dehydrogenase; Provisional	99.93
PRK12829	264	short chain dehydrogenase; Provisional	99.93
PRK05993	277	short chain dehydrogenase; Provisional	99.93
PRK08303	305	short chain dehydrogenase; Provisional	99.93
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.93
PRK06482	276	short chain dehydrogenase; Provisional	99.93
PRK06101	240	short chain dehydrogenase; Provisional	99.93
PRK05872	296	short chain dehydrogenase; Provisional	99.93
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	99.93
PRK06196	315	oxidoreductase; Provisional	99.93
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	99.93
PRK05866	293	short chain dehydrogenase; Provisional	99.93
PRK08263	275	short chain dehydrogenase; Provisional	99.93
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	99.93
PRK07454	241	short chain dehydrogenase; Provisional	99.93
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	99.93
PRK07775	274	short chain dehydrogenase; Provisional	99.93
PRK06179	270	short chain dehydrogenase; Provisional	99.93
PRK07109	334	short chain dehydrogenase; Provisional	99.93
PRK06914	280	short chain dehydrogenase; Provisional	99.92
PRK07904	253	short chain dehydrogenase; Provisional	99.92
PRK08862	227	short chain dehydrogenase; Provisional	99.92
PRK08264	238	short chain dehydrogenase; Validated	99.92
PRK07825	273	short chain dehydrogenase; Provisional	99.92
PRK08267	260	short chain dehydrogenase; Provisional	99.92
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.92
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	99.92
PRK07102	243	short chain dehydrogenase; Provisional	99.92
PRK06484	520	short chain dehydrogenase; Validated	99.92
PRK07041	230	short chain dehydrogenase; Provisional	99.92
PRK09291	257	short chain dehydrogenase; Provisional	99.92
PRK06181	263	short chain dehydrogenase; Provisional	99.92
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	99.92
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	99.92
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.92
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	99.92
PRK05650	270	short chain dehydrogenase; Provisional	99.92
PRK05693	274	short chain dehydrogenase; Provisional	99.92
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	99.92
PRK07326	237	short chain dehydrogenase; Provisional	99.92
PRK10538	248	malonic semialdehyde reductase; Provisional	99.91
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	99.91
PRK09072	263	short chain dehydrogenase; Provisional	99.91
PRK08251	248	short chain dehydrogenase; Provisional	99.91
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	99.91
PRK06924	251	short chain dehydrogenase; Provisional	99.91
PRK07023	243	short chain dehydrogenase; Provisional	99.91
PLN02780	320	ketoreductase/ oxidoreductase	99.91
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.91
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.91
PRK08324	681	short chain dehydrogenase; Validated	99.9
COG3320	382	Putative dehydrogenase domain of multifunctional n	99.9
PRK07201	657	short chain dehydrogenase; Provisional	99.9
PRK05855	582	short chain dehydrogenase; Validated	99.9
PRK07201	657	short chain dehydrogenase; Provisional	99.9
PRK05599	246	hypothetical protein; Provisional	99.9
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	99.9
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	99.9
PRK07832	272	short chain dehydrogenase; Provisional	99.9
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	99.9
PRK08177	225	short chain dehydrogenase; Provisional	99.9
PRK09009	235	C factor cell-cell signaling protein; Provisional	99.9
PLN03209	576	translocon at the inner envelope of chloroplast su	99.9
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	99.89
CHL00194	317	ycf39 Ycf39; Provisional	99.89
PRK06953	222	short chain dehydrogenase; Provisional	99.89
PLN00015	308	protochlorophyllide reductase	99.89
PRK07578	199	short chain dehydrogenase; Provisional	99.89
PRK08219	227	short chain dehydrogenase; Provisional	99.89
KOG1208	314	consensus Dehydrogenases with different specificit	99.89
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	99.88
PRK12367	245	short chain dehydrogenase; Provisional	99.88
PLN02503	605	fatty acyl-CoA reductase 2	99.88
PRK08017	256	oxidoreductase; Provisional	99.88
PLN00016	378	RNA-binding protein; Provisional	99.87
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	99.87
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.87
KOG1611	249	consensus Predicted short chain-type dehydrogenase	99.87
PLN02778	298	3,5-epimerase/4-reductase	99.87
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.87
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	99.86
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	99.85
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	99.85
COG1028	251	FabG Dehydrogenases with different specificities (	99.85
PRK05865	854	hypothetical protein; Provisional	99.85
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	99.85
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.84
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	99.84
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.84
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	99.83
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	99.82
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	99.82
PRK12320	699	hypothetical protein; Provisional	99.81
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	99.8
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	99.79
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	99.79
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	99.79
PLN02260	668	probable rhamnose biosynthetic enzyme	99.78
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	99.77
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	99.75
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	99.75
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	99.75
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	99.74
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	99.66
PRK06720	169	hypothetical protein; Provisional	99.61
COG2910	211	Putative NADH-flavin reductase [General function p	99.6
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	99.58
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	99.57
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	99.51
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	99.37
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	99.36
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	99.36
PTZ00325	321	malate dehydrogenase; Provisional	99.35
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	99.32
KOG2774	366	consensus NAD dependent epimerase [General functio	99.28
PLN00106	323	malate dehydrogenase	99.18
PRK08309	177	short chain dehydrogenase; Provisional	99.15
KOG4288	283	consensus Predicted oxidoreductase [General functi	99.09
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	98.97
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	98.95
PRK09620	229	hypothetical protein; Provisional	98.86
PRK12548	289	shikimate 5-dehydrogenase; Provisional	98.83
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	98.82
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	98.76
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	98.74
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	98.73
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	98.68
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	98.64
PRK05086	312	malate dehydrogenase; Provisional	98.55
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	98.55
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	98.45
KOG2733	423	consensus Uncharacterized membrane protein [Functi	98.45
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	98.43
PRK14982	340	acyl-ACP reductase; Provisional	98.35
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.33
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	98.32
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	98.31
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	98.21
KOG3019	315	consensus Predicted nucleoside-diphosphate sugar e	98.2
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	98.16
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	98.13
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	97.99
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	97.96
COG4982	866	3-oxoacyl-[acyl-carrier protein]	97.94
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	97.93
PRK05442	326	malate dehydrogenase; Provisional	97.92
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	97.84
PTZ00082	321	L-lactate dehydrogenase; Provisional	97.82
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	97.8
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	97.8
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	97.75
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	97.7
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	97.66
COG0569	225	TrkA K+ transport systems, NAD-binding component [	97.65
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	97.65
PLN00112	444	malate dehydrogenase (NADP); Provisional	97.62
PTZ00117	319	malate dehydrogenase; Provisional	97.61
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	97.6
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	97.6
TIGR01772	312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	97.6
PLN02968	381	Probable N-acetyl-gamma-glutamyl-phosphate reducta	97.59
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	97.59
COG3268	382	Uncharacterized conserved protein [Function unknow	97.57
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	97.5
COG0039	313	Mdh Malate/lactate dehydrogenases [Energy producti	97.49
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	97.47
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	97.46
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	97.45
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.44
cd05290	307	LDH_3 A subgroup of L-lactate dehydrogenases. L-la	97.43
PRK09496	453	trkA potassium transporter peripheral membrane com	97.43
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	97.42
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	97.41
PRK14874	334	aspartate-semialdehyde dehydrogenase; Provisional	97.41
PRK09496	453	trkA potassium transporter peripheral membrane com	97.39
PF08643	299	DUF1776: Fungal family of unknown function (DUF177	97.34
PF01118	121	Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi	97.34
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	97.29
TIGR01757	387	Malate-DH_plant malate dehydrogenase, NADP-depende	97.29
cd05295	452	MDH_like Malate dehydrogenase-like. These MDH-like	97.28
cd05292	308	LDH_2 A subgroup of L-lactate dehydrogenases. L-la	97.26
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	97.25
PRK13940	414	glutamyl-tRNA reductase; Provisional	97.25
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	97.24
PRK06223	307	malate dehydrogenase; Reviewed	97.22
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	97.22
PRK06129	308	3-hydroxyacyl-CoA dehydrogenase; Validated	97.19
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	97.17
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	97.16
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	97.16
PRK08306	296	dipicolinate synthase subunit A; Reviewed	97.15
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	97.15
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	97.14
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	97.14
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	97.12
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	97.12
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	97.11
PRK04148	134	hypothetical protein; Provisional	97.08
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	97.07
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	97.07
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	97.05
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	97.05
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	97.04
cd05293	312	LDH_1 A subgroup of L-lactate dehydrogenases. L-la	97.01
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	97.01
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	96.99
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	96.99
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	96.98
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	96.96
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	96.96
TIGR01763	305	MalateDH_bact malate dehydrogenase, NAD-dependent.	96.95
PRK00436	343	argC N-acetyl-gamma-glutamyl-phosphate reductase;	96.95
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	96.94
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	96.94
PLN02602	350	lactate dehydrogenase	96.93
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	96.93
cd01079	197	NAD_bind_m-THF_DH NAD binding domain of methylene-	96.92
TIGR01850	346	argC N-acetyl-gamma-glutamyl-phosphate reductase,	96.9
COG2085	211	Predicted dinucleotide-binding enzymes [General fu	96.88
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	96.88
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	96.88
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	96.82
PRK10792	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.82
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	96.82
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	96.81
cd00300	300	LDH_like L-lactate dehydrogenase-like enzymes. Mem	96.8
PRK14188	296	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.79
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	96.78
PRK09310	477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	96.73
PRK14191	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.73
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	96.72
PRK06019	372	phosphoribosylaminoimidazole carboxylase ATPase su	96.72
PRK15116	268	sulfur acceptor protein CsdL; Provisional	96.72
PRK00048	257	dihydrodipicolinate reductase; Provisional	96.71
PRK08664	349	aspartate-semialdehyde dehydrogenase; Reviewed	96.7
PRK08655	437	prephenate dehydrogenase; Provisional	96.7
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	96.69
PRK14189	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.69
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	96.67
PRK14176	287	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.67
KOG1494	345	consensus NAD-dependent malate dehydrogenase [Ener	96.66
PRK11199	374	tyrA bifunctional chorismate mutase/prephenate deh	96.66
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	96.66
PRK14179	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.65
cd01339	300	LDH-like_MDH L-lactate dehydrogenase-like malate d	96.64
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.64
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	96.64
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	96.62
PRK05671	336	aspartate-semialdehyde dehydrogenase; Reviewed	96.6
PLN00203	519	glutamyl-tRNA reductase	96.58
PRK04308	445	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.56
COG2130	340	Putative NADP-dependent oxidoreductases [General f	96.54
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	96.49
PRK14180	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.49
PLN02928	347	oxidoreductase family protein	96.47
PRK14172	278	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.47
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	96.46
PRK14173	287	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.45
PRK14177	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.44
PRK06849	389	hypothetical protein; Provisional	96.44
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	96.42
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	96.42
PRK14186	297	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.41
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	96.4
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	96.39
PRK13243	333	glyoxylate reductase; Reviewed	96.37
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	96.37
PRK14183	281	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.36
PRK08057	248	cobalt-precorrin-6x reductase; Reviewed	96.36
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	96.35
PRK14190	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.35
PRK14187	294	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.31
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	96.3
PRK14169	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.3
PRK14170	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.27
PRK00094	325	gpsA NAD(P)H-dependent glycerol-3-phosphate dehydr	96.27
cd05311	226	NAD_bind_2_malic_enz NAD(P) binding domain of mali	96.26
PRK14166	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.24
PRK07819	286	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.23
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	96.23
PLN03139	386	formate dehydrogenase; Provisional	96.2
PRK09288	395	purT phosphoribosylglycinamide formyltransferase 2	96.2
PRK14171	288	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.2
cd05191	86	NAD_bind_amino_acid_DH NAD(P) binding domain of am	96.19
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	96.19
PRK07066	321	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.17
TIGR01296	339	asd_B aspartate-semialdehyde dehydrogenase (peptid	96.16
PRK07574	385	formate dehydrogenase; Provisional	96.15
PRK14182	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.07
PRK07502	307	cyclohexadienyl dehydrogenase; Validated	96.07
PLN02516	299	methylenetetrahydrofolate dehydrogenase (NADP+)	96.06
PRK06249	313	2-dehydropantoate 2-reductase; Provisional	96.06
PTZ00075	476	Adenosylhomocysteinase; Provisional	96.04
PRK07877	722	hypothetical protein; Provisional	96.03
PRK08328	231	hypothetical protein; Provisional	96.01
PRK14193	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.98
PF12242	78	Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2	95.98
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	95.97
COG0289	266	DapB Dihydrodipicolinate reductase [Amino acid tra	95.96
TIGR01771	299	L-LDH-NAD L-lactate dehydrogenase. This model repr	95.95
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	95.92
PLN02616	364	tetrahydrofolate dehydrogenase/cyclohydrolase, put	95.92
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	95.91
PRK08223	287	hypothetical protein; Validated	95.9
PRK10669	558	putative cation:proton antiport protein; Provision	95.89
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	95.89
KOG1496	332	consensus Malate dehydrogenase [Energy production	95.87
PRK14178	279	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.86
PRK11064	415	wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Pro	95.85
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	95.84
PLN02897	345	tetrahydrofolate dehydrogenase/cyclohydrolase, put	95.83
PF02571	249	CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro:	95.82
PRK06487	317	glycerate dehydrogenase; Provisional	95.81
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	95.79
PRK14167	297	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.75
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	95.74
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	95.72

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=100.00  E-value=2.8e-38  Score=258.54  Aligned_cols=242  Identities=50%  Similarity=0.792  Sum_probs=206.9

Q ss_pred             CCCCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhh-HHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCC
Q 025755            1 MSGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKN-AHLKKLEGASENLQLFKTDLLDYEALCAATAGCT   79 (248)
Q Consensus         1 m~~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id   79 (248)
                      |....+++|+||||+||||+++++.||++||+|+++.|++++.+. +.+..+.....++..+..|++|++++.++++++|
T Consensus         1 m~~~~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~gcd   80 (327)
T KOG1502|consen    1 MDQDEGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAIDGCD   80 (327)
T ss_pred             CCCCCCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHhCCC
Confidence            555578999999999999999999999999999999999976433 4677777777789999999999999999999999


Q ss_pred             EEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcC-CCEEEEEeccceeccC-CCCCCCCccCCCCCCchhhhcc
Q 025755           80 GVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAK-VKRVVVVSSIGAVMLN-PNWPKGQVMDEECWSDEEFCKA  157 (248)
Q Consensus        80 ~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~-~~~iV~vSS~~~~~~~-~~~~~~~~~~e~~~~~~~~~~~  157 (248)
                      +|+|.|.+....... +..+.++.++.|+.|++++|++.. ++|+|++||.+++... +.......++|++|..++++..
T Consensus        81 gVfH~Asp~~~~~~~-~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aAv~~~~~~~~~~~vvdE~~wsd~~~~~~  159 (327)
T KOG1502|consen   81 GVFHTASPVDFDLED-PEKELIDPAVKGTKNVLEACKKTKSVKRVVYTSSTAAVRYNGPNIGENSVVDEESWSDLDFCRC  159 (327)
T ss_pred             EEEEeCccCCCCCCC-cHHhhhhHHHHHHHHHHHHHhccCCcceEEEeccHHHhccCCcCCCCCcccccccCCcHHHHHh
Confidence            999999988765333 334799999999999999999996 9999999999988765 5566678899999999999887


Q ss_pred             ccchHHHHHHHHHHHHHHHHHhCCccEEEEccCeeecCCCCCCCCccHHHHHHHHcCCCCCCCCCchhhhhhhhhcccee
Q 025755          158 TENYYCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKGFFFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       158 ~~~~Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                      ..++|+.||.++|..+.++++++++..+.+.|+.|+||..++..+.....+.+.++|..-..+...+-   .++|+|-..
T Consensus       160 ~~~~Y~~sK~lAEkaAw~fa~e~~~~lv~inP~lV~GP~l~~~l~~s~~~~l~~i~G~~~~~~n~~~~---~VdVrDVA~  236 (327)
T KOG1502|consen  160 KKLWYALSKTLAEKAAWEFAKENGLDLVTINPGLVFGPGLQPSLNSSLNALLKLIKGLAETYPNFWLA---FVDVRDVAL  236 (327)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhCCccEEEecCCceECCCcccccchhHHHHHHHHhcccccCCCCcee---eEeHHHHHH
Confidence            77899999999999999999999999999999999999988877777788888888854333322211   688888888


Q ss_pred             EEEeeccCC
Q 025755          238 LYRCKIQIP  246 (248)
Q Consensus       238 ~~~~~~~~p  246 (248)
                      +-..+++.|
T Consensus       237 AHv~a~E~~  245 (327)
T KOG1502|consen  237 AHVLALEKP  245 (327)
T ss_pred             HHHHHHcCc
Confidence            777777766

>PLN02214 cinnamoyl-CoA reductase

Probab=100.00  E-value=4e-34  Score=243.39  Aligned_cols=235  Identities=50%  Similarity=0.793  Sum_probs=178.6

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEE
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFH   83 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~   83 (248)
                      +++|+|+||||+||||++++++|+++|++|++++|+...........+.....++.++.+|++|.+++.++++++|+|||
T Consensus         8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih   87 (342)
T PLN02214          8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAIDGCDGVFH   87 (342)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHHhcCCEEEE
Confidence            57899999999999999999999999999999999764322222222222234688999999999999999999999999


Q ss_pred             ccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccccchHH
Q 025755           84 VACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYC  163 (248)
Q Consensus        84 ~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~  163 (248)
                      +|+...     ..+..++++|+.++.+++++|++.++++||++||..++|+.+...+..+++|+++...+...++.++|+
T Consensus        88 ~A~~~~-----~~~~~~~~~nv~gt~~ll~aa~~~~v~r~V~~SS~~avyg~~~~~~~~~~~E~~~~~~~~~~~p~~~Y~  162 (342)
T PLN02214         88 TASPVT-----DDPEQMVEPAVNGAKFVINAAAEAKVKRVVITSSIGAVYMDPNRDPEAVVDESCWSDLDFCKNTKNWYC  162 (342)
T ss_pred             ecCCCC-----CCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeccceeeeccCCCCCCcccCcccCCChhhccccccHHH
Confidence            999652     245778999999999999999999989999999977777653322234578887654444555677899


Q ss_pred             HHHHHHHHHHHHHHHhCCccEEEEccCeeecCCCCCCCCccHHHHHHHHcCCCCCCCCCchhhhhhhhhccceeEEEeec
Q 025755          164 LAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKGFFFTTPSHSYMLERTLVLNQGVRLYRCKI  243 (248)
Q Consensus       164 ~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~l~vd~g~~~~~~~~  243 (248)
                      .||.++|.++..++.+++++++++||+++|||...+........+.....+......   ....+.+||+|...++..++
T Consensus       163 ~sK~~aE~~~~~~~~~~g~~~v~lRp~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~---~~~~~~i~V~Dva~a~~~al  239 (342)
T PLN02214        163 YGKMVAEQAAWETAKEKGVDLVVLNPVLVLGPPLQPTINASLYHVLKYLTGSAKTYA---NLTQAYVDVRDVALAHVLVY  239 (342)
T ss_pred             HHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCcccCC---CCCcCeeEHHHHHHHHHHHH
Confidence            999999999999988888999999999999998654321222222344445433221   12457899999988887777


Q ss_pred             cCC
Q 025755          244 QIP  246 (248)
Q Consensus       244 ~~p  246 (248)
                      +.+
T Consensus       240 ~~~  242 (342)
T PLN02214        240 EAP  242 (342)
T ss_pred             hCc
Confidence            644

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=100.00  E-value=3e-34  Score=244.78  Aligned_cols=230  Identities=17%  Similarity=0.130  Sum_probs=180.1

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhc-----CCCCCeEEEEccCCCHHHHHHHhCCC
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLE-----GASENLQLFKTDLLDYEALCAATAGC   78 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~~~Di~d~~~~~~~~~~i   78 (248)
                      +++|+|+||||+||||++++++|+++|++|++++|....... ......     ....++.++.+|++|.+.+..+++++
T Consensus        13 ~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~~~   91 (348)
T PRK15181         13 LAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQH-NLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACKNV   91 (348)
T ss_pred             ccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchh-hhhhhhhccccccCCceEEEEccCCCHHHHHHHhhCC
Confidence            567999999999999999999999999999999986532111 111111     11246889999999999999999999


Q ss_pred             CEEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccc
Q 025755           79 TGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKAT  158 (248)
Q Consensus        79 d~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~  158 (248)
                      |+|||+|+..........+..++++|+.|+.+++++|++.+++++||+||.. +|+...   ..+..|+++..      |
T Consensus        92 d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~v~~SS~~-vyg~~~---~~~~~e~~~~~------p  161 (348)
T PRK15181         92 DYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFTYAASSS-TYGDHP---DLPKIEERIGR------P  161 (348)
T ss_pred             CEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeechH-hhCCCC---CCCCCCCCCCC------C
Confidence            9999999976543333344678999999999999999999999999999965 555421   34455555443      3


Q ss_pred             cchHHHHHHHHHHHHHHHHHhCCccEEEEccCeeecCCCCCC---CCccHHHHHHHHcCCCCCCCCCchhhhhhhhhccc
Q 025755          159 ENYYCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPT---INTSSLLLLGFLKGFFFTTPSHSYMLERTLVLNQG  235 (248)
Q Consensus       159 ~~~Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~g~~l~vd~g  235 (248)
                      .++|+.||..+|.++..+..+++++++++||+++|||.+.+.   ....+.++.++..++.+...+++....+.+||||.
T Consensus       162 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~~~i~~~g~g~~~rd~i~v~D~  241 (348)
T PRK15181        162 LSPYAVTKYVNELYADVFARSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENV  241 (348)
T ss_pred             CChhhHHHHHHHHHHHHHHHHhCCCEEEEEecceeCcCCCCCCccccCHHHHHHHHHcCCCcEEeCCCCceEeeEEHHHH
Confidence            456999999999999999888889999999999999987543   13457777888888877777777777899999999


Q ss_pred             eeEEEeecc
Q 025755          236 VRLYRCKIQ  244 (248)
Q Consensus       236 ~~~~~~~~~  244 (248)
                      +.++..+..
T Consensus       242 a~a~~~~~~  250 (348)
T PRK15181        242 IQANLLSAT  250 (348)
T ss_pred             HHHHHHHHh
Confidence            998766543

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=100.00  E-value=7.9e-33  Score=233.77  Aligned_cols=238  Identities=44%  Similarity=0.713  Sum_probs=179.2

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhh-HHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEE
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKN-AHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVF   82 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi   82 (248)
                      ..+|+|+||||+|+||++++++|+++|++|+++.|+...... ...........++.++.+|++|.+++.++++++|+||
T Consensus         3 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   82 (322)
T PLN02986          3 GGGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIEGCDAVF   82 (322)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHhCCCEEE
Confidence            467999999999999999999999999999999987653221 1111111123578999999999999999999999999


Q ss_pred             EccccCCCCCCCCccccchhhhHHHHHHHHHHHHhc-CCCEEEEEecccee-ccCCCCCCCCccCCCCCCchhhhccccc
Q 025755           83 HVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKA-KVKRVVVVSSIGAV-MLNPNWPKGQVMDEECWSDEEFCKATEN  160 (248)
Q Consensus        83 ~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~-~~~~iV~vSS~~~~-~~~~~~~~~~~~~e~~~~~~~~~~~~~~  160 (248)
                      |+|+..... ..++...++++|+.|+.++++++++. ++++||++||.+.+ ++.+......+++|+++..+.....+.+
T Consensus        83 h~A~~~~~~-~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~rvV~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~  161 (322)
T PLN02986         83 HTASPVFFT-VKDPQTELIDPALKGTINVLNTCKETPSVKRVILTSSTAAVLFRQPPIEANDVVDETFFSDPSLCRETKN  161 (322)
T ss_pred             EeCCCcCCC-CCCchhhhhHHHHHHHHHHHHHHHhcCCccEEEEecchhheecCCccCCCCCCcCcccCCChHHhhcccc
Confidence            999975432 12333457899999999999999986 68899999997654 3332222245678888776654445567


Q ss_pred             hHHHHHHHHHHHHHHHHHhCCccEEEEccCeeecCCCCCCCCccHHHHHHHHcCCCCCCCCCchhhhhhhhhccceeEEE
Q 025755          161 YYCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKGFFFTTPSHSYMLERTLVLNQGVRLYR  240 (248)
Q Consensus       161 ~Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~l~vd~g~~~~~  240 (248)
                      +|+.||.++|.++.++.++++++++++||+++|||...+.......++..+..+..+.  ..  ...+.++|+|...++.
T Consensus       162 ~Y~~sK~~aE~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~--~~--~~~~~v~v~Dva~a~~  237 (322)
T PLN02986        162 WYPLSKILAENAAWEFAKDNGIDMVVLNPGFICGPLLQPTLNFSVELIVDFINGKNLF--NN--RFYRFVDVRDVALAHI  237 (322)
T ss_pred             chHHHHHHHHHHHHHHHHHhCCeEEEEcccceeCCCCCCCCCccHHHHHHHHcCCCCC--CC--cCcceeEHHHHHHHHH
Confidence            8999999999999999988889999999999999986654334455666666665431  11  2346789999888877


Q ss_pred             eeccCC
Q 025755          241 CKIQIP  246 (248)
Q Consensus       241 ~~~~~p  246 (248)
                      .++..|
T Consensus       238 ~al~~~  243 (322)
T PLN02986        238 KALETP  243 (322)
T ss_pred             HHhcCc
Confidence            776654

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=100.00  E-value=9.7e-33  Score=233.49  Aligned_cols=238  Identities=42%  Similarity=0.691  Sum_probs=180.4

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhH-HhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEE
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNA-HLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFH   83 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~   83 (248)
                      ++|++|||||+||||++++++|+++|++|+++.|+....... ..........++.++.+|++|.+++.++++++|+|||
T Consensus         4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih   83 (325)
T PLN02989          4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAIDGCETVFH   83 (325)
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHcCCCEEEE
Confidence            579999999999999999999999999999998886432211 1111111235688999999999999999999999999


Q ss_pred             ccccCCCCCCCCccccchhhhHHHHHHHHHHHHhc-CCCEEEEEeccceeccCCC-CCCCCccCCCCCCchhhhccccch
Q 025755           84 VACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKA-KVKRVVVVSSIGAVMLNPN-WPKGQVMDEECWSDEEFCKATENY  161 (248)
Q Consensus        84 ~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~-~~~~iV~vSS~~~~~~~~~-~~~~~~~~e~~~~~~~~~~~~~~~  161 (248)
                      |||........+.+...+++|+.++.++++++.+. +.++||++||..++++... .....+++|+.+..+.....+.++
T Consensus        84 ~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~~  163 (325)
T PLN02989         84 TASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSSMAAVLAPETKLGPNDVVDETFFTNPSFAEERKQW  163 (325)
T ss_pred             eCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecchhheecCCccCCCCCccCcCCCCchhHhcccccc
Confidence            99976443333455678999999999999999886 5689999999776655321 112456788888777655455577


Q ss_pred             HHHHHHHHHHHHHHHHHhCCccEEEEccCeeecCCCCCCCCccHHHHHHHHcCCCCCCCCCchhhhhhhhhccceeEEEe
Q 025755          162 YCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKGFFFTTPSHSYMLERTLVLNQGVRLYRC  241 (248)
Q Consensus       162 Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~l~vd~g~~~~~~  241 (248)
                      |+.||..+|.++..+.++++++++++||+++|||.+.+.......++.++..++....    ....+.++|+|...++..
T Consensus       164 Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~i~~~~~~~~~~~----~~~r~~i~v~Dva~a~~~  239 (325)
T PLN02989        164 YVLSKTLAEDAAWRFAKDNEIDLIVLNPGLVTGPILQPTLNFSVAVIVELMKGKNPFN----TTHHRFVDVRDVALAHVK  239 (325)
T ss_pred             hHHHHHHHHHHHHHHHHHcCCeEEEEcCCceeCCCCCCCCCchHHHHHHHHcCCCCCC----CcCcCeeEHHHHHHHHHH
Confidence            9999999999999999888899999999999999876543344556666666654321    123567899998887766


Q ss_pred             eccCC
Q 025755          242 KIQIP  246 (248)
Q Consensus       242 ~~~~p  246 (248)
                      ++..+
T Consensus       240 ~l~~~  244 (325)
T PLN02989        240 ALETP  244 (325)
T ss_pred             HhcCc
Confidence            66543

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=100.00  E-value=2.9e-32  Score=230.22  Aligned_cols=237  Identities=46%  Similarity=0.738  Sum_probs=174.6

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhh-HHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEE
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKN-AHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFH   83 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~   83 (248)
                      ++|+||||||+||||++++++|+++|++|++++|+...... ..........+++.++++|++|.+.+..+++++|+|||
T Consensus         3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih   82 (322)
T PLN02662          3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVDGCEGVFH   82 (322)
T ss_pred             CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHcCCCEEEE
Confidence            46899999999999999999999999999999987643211 11111111235789999999999999999999999999


Q ss_pred             ccccCCCCCCCCccccchhhhHHHHHHHHHHHHhc-CCCEEEEEecccee-ccCCCCCCCCccCCCCCCchhhhccccch
Q 025755           84 VACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKA-KVKRVVVVSSIGAV-MLNPNWPKGQVMDEECWSDEEFCKATENY  161 (248)
Q Consensus        84 ~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~-~~~~iV~vSS~~~~-~~~~~~~~~~~~~e~~~~~~~~~~~~~~~  161 (248)
                      +|+..... ..++...++++|+.++.++++++.+. ++++||++||.+++ |+........+++|+.+..+..+....+.
T Consensus        83 ~A~~~~~~-~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~v~~SS~~~~~y~~~~~~~~~~~~E~~~~~p~~~~~~~~~  161 (322)
T PLN02662         83 TASPFYHD-VTDPQAELIDPAVKGTLNVLRSCAKVPSVKRVVVTSSMAAVAYNGKPLTPDVVVDETWFSDPAFCEESKLW  161 (322)
T ss_pred             eCCcccCC-CCChHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEccCHHHhcCCCcCCCCCCcCCcccCCChhHhhcccch
Confidence            99975431 12222378899999999999999987 88999999997642 43211112346788777666544333456


Q ss_pred             HHHHHHHHHHHHHHHHHhCCccEEEEccCeeecCCCCCCCCccHHHHHHHHcCCCCCCCCCchhhhhhhhhccceeEEEe
Q 025755          162 YCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKGFFFTTPSHSYMLERTLVLNQGVRLYRC  241 (248)
Q Consensus       162 Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~l~vd~g~~~~~~  241 (248)
                      |+.+|.++|.++..+.++++++++++||+++|||...+........+.++..+.... + .  ...+.++|+|.+.++..
T Consensus       162 Y~~sK~~~E~~~~~~~~~~~~~~~~lRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~-~-~--~~~~~i~v~Dva~a~~~  237 (322)
T PLN02662        162 YVLSKTLAEEAAWKFAKENGIDMVTINPAMVIGPLLQPTLNTSAEAILNLINGAQTF-P-N--ASYRWVDVRDVANAHIQ  237 (322)
T ss_pred             HHHHHHHHHHHHHHHHHHcCCcEEEEeCCcccCCCCCCCCCchHHHHHHHhcCCccC-C-C--CCcCeEEHHHHHHHHHH
Confidence            999999999999999988889999999999999986543233444555555554321 1 1  23567999998888777


Q ss_pred             eccCC
Q 025755          242 KIQIP  246 (248)
Q Consensus       242 ~~~~p  246 (248)
                      +++.|
T Consensus       238 ~~~~~  242 (322)
T PLN02662        238 AFEIP  242 (322)
T ss_pred             HhcCc
Confidence            76644

>PLN00198 anthocyanidin reductase; Provisional

Probab=100.00  E-value=7e-32  Score=229.47  Aligned_cols=240  Identities=38%  Similarity=0.572  Sum_probs=169.9

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhh-HHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEE
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKN-AHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVF   82 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi   82 (248)
                      +++|+|+||||+||||+++++.|+++|++|+++.|+...... .....+. ..+++.++.+|++|.+++.++++++|+||
T Consensus         7 ~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi   85 (338)
T PLN00198          7 TGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQ-ELGDLKIFGADLTDEESFEAPIAGCDLVF   85 (338)
T ss_pred             CCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHhcC-CCCceEEEEcCCCChHHHHHHHhcCCEEE
Confidence            568999999999999999999999999999998887642211 1111121 12368899999999999999999999999


Q ss_pred             EccccCCCCCCCCccccchhhhHHHHHHHHHHHHhc-CCCEEEEEeccceeccCCCCCCCCccCCCCCCchh---hhccc
Q 025755           83 HVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKA-KVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEE---FCKAT  158 (248)
Q Consensus        83 ~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~-~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~---~~~~~  158 (248)
                      |+|+..... ..++...++++|+.++.++++++.+. +.++|||+||.+.++.........+++|+.+....   ....|
T Consensus        86 h~A~~~~~~-~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~~~g~~~~~~~~~~~~E~~~~~~~~~~~~~~p  164 (338)
T PLN00198         86 HVATPVNFA-SEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAAAVSINKLSGTGLVMNEKNWTDVEFLTSEKPP  164 (338)
T ss_pred             EeCCCCccC-CCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecceeeeccCCCCCCceeccccCCchhhhhhcCCc
Confidence            999964321 12333457899999999999999887 57899999997655433211123455665432211   11235


Q ss_pred             cchHHHHHHHHHHHHHHHHHhCCccEEEEccCeeecCCCCCCCCccHHHHHHHHcCCCCCCCC-Cchh----hhhhhhhc
Q 025755          159 ENYYCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKGFFFTTPS-HSYM----LERTLVLN  233 (248)
Q Consensus       159 ~~~Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~----~g~~l~vd  233 (248)
                      .++|+.||.++|.++..++++++++++++||+++|||.+.........++..+..++.+...+ .+..    ..+.+|||
T Consensus       165 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~R~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~V~  244 (338)
T PLN00198        165 TWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGPSLTSDIPSSLSLAMSLITGNEFLINGLKGMQMLSGSISITHVE  244 (338)
T ss_pred             cchhHHHHHHHHHHHHHHHHhcCceEEEEeCCceECCCccCCCCCcHHHHHHHHcCCccccccccccccccCCcceeEHH
Confidence            677999999999999999998889999999999999986543222222334455554333222 1111    24789999


Q ss_pred             cceeEEEeeccC
Q 025755          234 QGVRLYRCKIQI  245 (248)
Q Consensus       234 ~g~~~~~~~~~~  245 (248)
                      |.+.++..+++.
T Consensus       245 D~a~a~~~~~~~  256 (338)
T PLN00198        245 DVCRAHIFLAEK  256 (338)
T ss_pred             HHHHHHHHHhhC
Confidence            998887666654

>PLN02572 UDP-sulfoquinovose synthase

Probab=100.00  E-value=4.1e-32  Score=237.61  Aligned_cols=237  Identities=19%  Similarity=0.167  Sum_probs=172.6

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCch-h--------------hHHhhhhc-CCCCCeEEEEccCCC
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDE-K--------------NAHLKKLE-GASENLQLFKTDLLD   67 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~-~--------------~~~~~~~~-~~~~~~~~~~~Di~d   67 (248)
                      +++|+||||||+||||++++++|+++|++|+++++..... .              ...++... ....++.++.+|++|
T Consensus        45 ~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~d  124 (442)
T PLN02572         45 SKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYVGDICD  124 (442)
T ss_pred             ccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEECCCCC
Confidence            6889999999999999999999999999999987532100 0              00111110 112468899999999


Q ss_pred             HHHHHHHhC--CCCEEEEccccCCCCCCC---CccccchhhhHHHHHHHHHHHHhcCCC-EEEEEeccceeccCCCCCCC
Q 025755           68 YEALCAATA--GCTGVFHVACPVPVGKVP---NPEVQLIDPAVVGTKNVLNSCVKAKVK-RVVVVSSIGAVMLNPNWPKG  141 (248)
Q Consensus        68 ~~~~~~~~~--~id~vi~~ag~~~~~~~~---~~~~~~~~~n~~g~~~~~~~~~~~~~~-~iV~vSS~~~~~~~~~~~~~  141 (248)
                      .+.+.++++  ++|+|||+|+........   ..+..++++|+.|+.++++++++.+++ ++|++||.. +|+.+.    
T Consensus       125 ~~~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv~~~~V~~SS~~-vYG~~~----  199 (442)
T PLN02572        125 FEFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAPDCHLVKLGTMG-EYGTPN----  199 (442)
T ss_pred             HHHHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCCCccEEEEecce-ecCCCC----
Confidence            999999988  489999999764432211   122456789999999999999998875 899999965 555431    


Q ss_pred             CccCCCCC-----Cchh---hhccccchHHHHHHHHHHHHHHHHHhCCccEEEEccCeeecCCCCCC-------------
Q 025755          142 QVMDEECW-----SDEE---FCKATENYYCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPT-------------  200 (248)
Q Consensus       142 ~~~~e~~~-----~~~~---~~~~~~~~Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~-------------  200 (248)
                      .+++|+..     ..++   .+..|.++|+.||.++|.++..++.+++++++++||+++|||++...             
T Consensus       200 ~~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~gl~~v~lR~~~vyGp~~~~~~~~~~li~~~~~~  279 (442)
T PLN02572        200 IDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETMMDEELINRLDYD  279 (442)
T ss_pred             CCCcccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHhcCCCEEEEecccccCCCCcccccccccccccCcc
Confidence            22333211     0011   13455677999999999999999998899999999999999986531             


Q ss_pred             ---CCccHHHHHHHHcCCCCCCCCCchhhhhhhhhccceeEEEeeccC
Q 025755          201 ---INTSSLLLLGFLKGFFFTTPSHSYMLERTLVLNQGVRLYRCKIQI  245 (248)
Q Consensus       201 ---~~~~~~~~~~~~~~~~l~~~~~~~~~g~~l~vd~g~~~~~~~~~~  245 (248)
                         ......++.++..++.+...+++....+.+||||.+.++..+++.
T Consensus       280 ~~~~~~i~~~~~~~~~g~~i~v~g~G~~~Rdfi~V~Dva~a~~~al~~  327 (442)
T PLN02572        280 GVFGTALNRFCVQAAVGHPLTVYGKGGQTRGFLDIRDTVRCIEIAIAN  327 (442)
T ss_pred             cchhhHHHHHHHHHhcCCCceecCCCCEEECeEEHHHHHHHHHHHHhC
Confidence               123445667777787766666666778999999999887776653

>PLN02427 UDP-apiose/xylose synthase

Probab=100.00  E-value=7e-32  Score=233.34  Aligned_cols=236  Identities=16%  Similarity=0.147  Sum_probs=171.2

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHC-CCeEEEEEcCCCchhhHHhhhhc--CCCCCeEEEEccCCCHHHHHHHhCCCCE
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLK-GYMVHGTVRDPCDEKNAHLKKLE--GASENLQLFKTDLLDYEALCAATAGCTG   80 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~~Di~d~~~~~~~~~~id~   80 (248)
                      .+.|+|+||||+||||++++++|+++ |++|++++|+....  ..+....  ....++.++.+|++|.+.+.++++++|+
T Consensus        12 ~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~--~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~d~   89 (386)
T PLN02427         12 IKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKI--KHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIKMADL   89 (386)
T ss_pred             ccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhh--hhhhccccccCCCCeEEEEcCCCChHHHHHHhhcCCE
Confidence            45679999999999999999999998 59999999875321  1111110  1124689999999999999999999999


Q ss_pred             EEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCchh-------
Q 025755           81 VFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEE-------  153 (248)
Q Consensus        81 vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~-------  153 (248)
                      |||+|+..........+.+.+..|+.++.+++++|++.+ +++||+||.. +|+...   ..+++|+.+..++       
T Consensus        90 ViHlAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~~-~r~v~~SS~~-vYg~~~---~~~~~e~~p~~~~~~~~~~~  164 (386)
T PLN02427         90 TINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCE-VYGKTI---GSFLPKDHPLRQDPAFYVLK  164 (386)
T ss_pred             EEEcccccChhhhhhChHHHHHHHHHHHHHHHHHHHhcC-CEEEEEeeee-eeCCCc---CCCCCccccccccccccccc
Confidence            999999765432223334567889999999999998877 7999999965 555422   2233444332211       


Q ss_pred             ---------hhccccchHHHHHHHHHHHHHHHHHhCCccEEEEccCeeecCCCCCC----------CCccHHHHHHHHcC
Q 025755          154 ---------FCKATENYYCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPT----------INTSSLLLLGFLKG  214 (248)
Q Consensus       154 ---------~~~~~~~~Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~----------~~~~~~~~~~~~~~  214 (248)
                               ...++.+.|+.||.++|.++..++.+++++++++||+++|||.+...          ......++..+..+
T Consensus       165 e~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  244 (386)
T PLN02427        165 EDESPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRR  244 (386)
T ss_pred             ccccccccCCCCccccchHHHHHHHHHHHHHHHhhcCCceEEecccceeCCCCCccccccccccccchHHHHHHHHHhcC
Confidence                     11134467999999999999999888889999999999999975311          11223344566667


Q ss_pred             CCCCCCCCchhhhhhhhhccceeEEEeeccCC
Q 025755          215 FFFTTPSHSYMLERTLVLNQGVRLYRCKIQIP  246 (248)
Q Consensus       215 ~~l~~~~~~~~~g~~l~vd~g~~~~~~~~~~p  246 (248)
                      +.+....++....+.+||||...++..+++.+
T Consensus       245 ~~~~~~g~g~~~r~~i~V~Dva~ai~~al~~~  276 (386)
T PLN02427        245 EPLKLVDGGQSQRTFVYIKDAIEAVLLMIENP  276 (386)
T ss_pred             CCeEEECCCCceECcEeHHHHHHHHHHHHhCc
Confidence            66555555555668899999988887776543

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=7.2e-32  Score=215.76  Aligned_cols=216  Identities=24%  Similarity=0.241  Sum_probs=169.4

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC--CCCEEEEc
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA--GCTGVFHV   84 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~--~id~vi~~   84 (248)
                      ++||||||+|+||++.+.+|++.|++|++++.-.. .....+...     .+.++++|+.|.+.+.++|+  ++|.|||+
T Consensus         1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~-g~~~~v~~~-----~~~f~~gDi~D~~~L~~vf~~~~idaViHF   74 (329)
T COG1087           1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSN-GHKIALLKL-----QFKFYEGDLLDRALLTAVFEENKIDAVVHF   74 (329)
T ss_pred             CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCC-CCHHHhhhc-----cCceEEeccccHHHHHHHHHhcCCCEEEEC
Confidence            58999999999999999999999999999986442 222333221     16899999999999999997  58999999


Q ss_pred             cccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccccchHHH
Q 025755           85 ACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCL  164 (248)
Q Consensus        85 ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~  164 (248)
                      ||....+++...+.++|+.|+.||.+|+++|++.++++|||-|| +++||.+.   ..|++|+++..|      .|+||.
T Consensus        75 Aa~~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv~~~vFSSt-AavYG~p~---~~PI~E~~~~~p------~NPYG~  144 (329)
T COG1087          75 AASISVGESVQNPLKYYDNNVVGTLNLIEAMLQTGVKKFIFSST-AAVYGEPT---TSPISETSPLAP------INPYGR  144 (329)
T ss_pred             ccccccchhhhCHHHHHhhchHhHHHHHHHHHHhCCCEEEEecc-hhhcCCCC---CcccCCCCCCCC------CCcchh
Confidence            99998888888889999999999999999999999999999888 55888875   678999888765      566999


Q ss_pred             HHHHHHHHHHHHHHhCCccEEEEccCeeecCCCCCC-------CCccHHHHHHHHcCC--CCCCCCCchh------hhhh
Q 025755          165 AKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPT-------INTSSLLLLGFLKGF--FFTTPSHSYM------LERT  229 (248)
Q Consensus       165 sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~-------~~~~~~~~~~~~~~~--~l~~~~~~~~------~g~~  229 (248)
                      ||.+.|++.+.++..++++++++|-.++.|-.....       .......+-+..-|+  .+.+-++.|-      .++.
T Consensus       145 sKlm~E~iL~d~~~a~~~~~v~LRYFN~aGA~~~G~iGe~~~~~thLip~~~q~A~G~r~~l~ifG~DY~T~DGT~iRDY  224 (329)
T COG1087         145 SKLMSEEILRDAAKANPFKVVILRYFNVAGACPDGTLGQRYPGATLLIPVAAEAALGKRDKLFIFGDDYDTKDGTCIRDY  224 (329)
T ss_pred             HHHHHHHHHHHHHHhCCCcEEEEEecccccCCCCCccCCCCCCcchHHHHHHHHHhcCCceeEEeCCCCCCCCCCeeeee
Confidence            999999999999999999999999999998653321       112223333444444  2344444333      3456


Q ss_pred             hhhccceeE
Q 025755          230 LVLNQGVRL  238 (248)
Q Consensus       230 l~vd~g~~~  238 (248)
                      |||.|...+
T Consensus       225 IHV~DLA~a  233 (329)
T COG1087         225 IHVDDLADA  233 (329)
T ss_pred             eehhHHHHH
Confidence            777665443

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=100.00  E-value=3.2e-32  Score=224.83  Aligned_cols=222  Identities=29%  Similarity=0.291  Sum_probs=160.8

Q ss_pred             EEEcCccHHHHHHHHHHHHCC--CeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEEcccc
Q 025755           10 CVTGAGGYIASWLVKYLLLKG--YMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFHVACP   87 (248)
Q Consensus        10 lVtG~~g~iG~~~~~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~~ag~   87 (248)
                      |||||+||||++++++|+++|  ++|.++++............    .+...++++|++|.+++.++++++|+|||+|++
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~~~~~~----~~~~~~~~~Di~d~~~l~~a~~g~d~V~H~Aa~   76 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFLKDLQK----SGVKEYIQGDITDPESLEEALEGVDVVFHTAAP   76 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccchhhhc----ccceeEEEeccccHHHHHHHhcCCceEEEeCcc
Confidence            699999999999999999999  79999888764322111111    223349999999999999999999999999998


Q ss_pred             CCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccccchHHHHHH
Q 025755           88 VPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAKT  167 (248)
Q Consensus        88 ~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~  167 (248)
                      .+... ..+.+.++++|+.||++++++|++.+++++||+||..++.......+-...+|+.+..+.    +.++|+.||+
T Consensus        77 ~~~~~-~~~~~~~~~vNV~GT~nvl~aa~~~~VkrlVytSS~~vv~~~~~~~~~~~~dE~~~~~~~----~~~~Y~~SK~  151 (280)
T PF01073_consen   77 VPPWG-DYPPEEYYKVNVDGTRNVLEAARKAGVKRLVYTSSISVVFDNYKGDPIINGDEDTPYPSS----PLDPYAESKA  151 (280)
T ss_pred             ccccC-cccHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcCcceeEeccCCCCcccCCcCCccccc----ccCchHHHHH
Confidence            76533 345577999999999999999999999999999998877653221111122444433222    4566999999


Q ss_pred             HHHHHHHHHHH---hC--CccEEEEccCeeecCCCCCCCCccHHHHHHHHcCCCCCCCCCchhhhhhhhhccceeEEEee
Q 025755          168 IAEIQALEYAK---RG--ELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKGFFFTTPSHSYMLERTLVLNQGVRLYRCK  242 (248)
Q Consensus       168 ~~e~l~~~~~~---~~--~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~l~vd~g~~~~~~~  242 (248)
                      .+|.++.+...   +.  +++.++|||+.||||.+...   .+.+......+........+...-+.+||++-..+..+|
T Consensus       152 ~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~~---~~~~~~~~~~g~~~~~~g~~~~~~~~vyV~NvA~ahvlA  228 (280)
T PF01073_consen  152 LAEKAVLEANGSELKNGGRLRTCALRPAGIYGPGDQRL---VPRLVKMVRSGLFLFQIGDGNNLFDFVYVENVAHAHVLA  228 (280)
T ss_pred             HHHHHHHhhcccccccccceeEEEEeccEEeCcccccc---cchhhHHHHhcccceeecCCCceECcEeHHHHHHHHHHH
Confidence            99999999876   22  48999999999999987643   334444445553333333333334567787776655544


Q ss_pred             c
Q 025755          243 I  243 (248)
Q Consensus       243 ~  243 (248)
                      .
T Consensus       229 ~  229 (280)
T PF01073_consen  229 A  229 (280)
T ss_pred             H
Confidence            3

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.98  E-value=2.3e-31  Score=212.02  Aligned_cols=225  Identities=20%  Similarity=0.210  Sum_probs=186.2

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCCC--eEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC--CCCEEE
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKGY--MVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA--GCTGVF   82 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~--~id~vi   82 (248)
                      |++|||||+||||+++++.++++..  +|+.++.-.-......++.+.. .++..|+++||.|.+.+.++++  ++|+|+
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~-~~~~~fv~~DI~D~~~v~~~~~~~~~D~Vv   79 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVED-SPRYRFVQGDICDRELVDRLFKEYQPDAVV   79 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhhc-CCCceEEeccccCHHHHHHHHHhcCCCeEE
Confidence            5899999999999999999999764  4677665444444444444333 4789999999999999999998  599999


Q ss_pred             EccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCC-EEEEEeccceeccCCCCCCCCccCCCCCCchhhhccccch
Q 025755           83 HVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVK-RVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENY  161 (248)
Q Consensus        83 ~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~-~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~  161 (248)
                      |.|+-.....+-..+..++++|+.||.++++++++...+ |+++||+. .+||+.... ....+|++|.+|      .++
T Consensus        80 hfAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTD-EVYG~l~~~-~~~FtE~tp~~P------sSP  151 (340)
T COG1088          80 HFAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHISTD-EVYGDLGLD-DDAFTETTPYNP------SSP  151 (340)
T ss_pred             EechhccccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEeccc-cccccccCC-CCCcccCCCCCC------CCC
Confidence            999987777666777999999999999999999998653 99999995 477764311 124556666555      566


Q ss_pred             HHHHHHHHHHHHHHHHHhCCccEEEEccCeeecCCCCCCCCccHHHHHHHHcCCCCCCCCCchhhhhhhhhccceeEEEe
Q 025755          162 YCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKGFFFTTPSHSYMLERTLVLNQGVRLYRC  241 (248)
Q Consensus       162 Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~l~vd~g~~~~~~  241 (248)
                      |++||+.+..+++.|...+|+++++.|+++-|||.+.+. ..++.++..++.|+.+.+.+++...++.|+|+|=++++..
T Consensus       152 YSASKAasD~lVray~~TYglp~~ItrcSNNYGPyqfpE-KlIP~~I~nal~g~~lpvYGdG~~iRDWl~VeDh~~ai~~  230 (340)
T COG1088         152 YSASKAASDLLVRAYVRTYGLPATITRCSNNYGPYQFPE-KLIPLMIINALLGKPLPVYGDGLQIRDWLYVEDHCRAIDL  230 (340)
T ss_pred             cchhhhhHHHHHHHHHHHcCCceEEecCCCCcCCCcCch-hhhHHHHHHHHcCCCCceecCCcceeeeEEeHhHHHHHHH
Confidence            999999999999999999999999999999999999876 6788899999999999999999999999999987776543

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=99.98  E-value=2.2e-31  Score=227.33  Aligned_cols=227  Identities=23%  Similarity=0.182  Sum_probs=171.9

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCC--CCEE
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAG--CTGV   81 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~--id~v   81 (248)
                      +++|+||||||+||||+++++.|+++|++|++++|+..... .....+. ...++.++.+|++|.+++.+++++  +|+|
T Consensus         2 ~~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~-~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~v   79 (349)
T TIGR02622         2 WQGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSP-NLFELLN-LAKKIEDHFGDIRDAAKLRKAIAEFKPEIV   79 (349)
T ss_pred             cCCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccch-hHHHHHh-hcCCceEEEccCCCHHHHHHHHhhcCCCEE
Confidence            46799999999999999999999999999999998764321 1111111 124677899999999999999885  6999


Q ss_pred             EEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcC-CCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccccc
Q 025755           82 FHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAK-VKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATEN  160 (248)
Q Consensus        82 i~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~-~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~  160 (248)
                      ||+|+..........+...+++|+.++.++++++++.+ .+++|++||.. +|+....  ..+++|+.+..+      .+
T Consensus        80 ih~A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS~~-vyg~~~~--~~~~~e~~~~~p------~~  150 (349)
T TIGR02622        80 FHLAAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVTSDK-CYRNDEW--VWGYRETDPLGG------HD  150 (349)
T ss_pred             EECCcccccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEechh-hhCCCCC--CCCCccCCCCCC------CC
Confidence            99999654443344557889999999999999998876 78999999965 5554221  234556554433      45


Q ss_pred             hHHHHHHHHHHHHHHHHHhC-------CccEEEEccCeeecCCCCCCCCccHHHHHHHHcCCCCCCCCCchhhhhhhhhc
Q 025755          161 YYCLAKTIAEIQALEYAKRG-------ELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKGFFFTTPSHSYMLERTLVLN  233 (248)
Q Consensus       161 ~Y~~sK~~~e~l~~~~~~~~-------~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~l~vd  233 (248)
                      +|+.||.+.|.+++.++.++       +++++++||+++|||.+.......+.++..+..+..+... ++....+.+|+|
T Consensus       151 ~Y~~sK~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~-~g~~~rd~i~v~  229 (349)
T TIGR02622       151 PYSSSKACAELVIASYRSSFFGVANFHGIKIASARAGNVIGGGDWAEDRLIPDVIRAFSSNKIVIIR-NPDATRPWQHVL  229 (349)
T ss_pred             cchhHHHHHHHHHHHHHHHhhcccccCCCcEEEEccCcccCCCcchhhhhhHHHHHHHhcCCCeEEC-CCCcccceeeHH
Confidence            69999999999999887653       7999999999999997543334567788888888765544 345566789999


Q ss_pred             cceeEEEee
Q 025755          234 QGVRLYRCK  242 (248)
Q Consensus       234 ~g~~~~~~~  242 (248)
                      |.+.++..+
T Consensus       230 D~a~a~~~~  238 (349)
T TIGR02622       230 EPLSGYLLL  238 (349)
T ss_pred             HHHHHHHHH
Confidence            987776544

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PLN02650 dihydroflavonol-4-reductase

Probab=99.97  E-value=2.2e-30  Score=221.31  Aligned_cols=235  Identities=38%  Similarity=0.645  Sum_probs=165.7

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhH-HhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEE
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNA-HLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVF   82 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi   82 (248)
                      -+.|+||||||+||||++++++|+++|++|++++|+....... ..........++.++.+|++|.+.+.++++++|+||
T Consensus         3 ~~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~d~Vi   82 (351)
T PLN02650          3 SQKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIRGCTGVF   82 (351)
T ss_pred             CCCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHhCCCEEE
Confidence            4568999999999999999999999999999999876432111 111111112368899999999999999999999999


Q ss_pred             EccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcC-CCEEEEEeccceeccCCCCCCCCc-cCCCCCCchhh---hcc
Q 025755           83 HVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAK-VKRVVVVSSIGAVMLNPNWPKGQV-MDEECWSDEEF---CKA  157 (248)
Q Consensus        83 ~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~-~~~iV~vSS~~~~~~~~~~~~~~~-~~e~~~~~~~~---~~~  157 (248)
                      |+|+..... ..++...++++|+.++.++++++.+.+ .++|||+||...+++...   ..+ ++|+.+...+.   ...
T Consensus        83 H~A~~~~~~-~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~~~~~~---~~~~~~E~~~~~~~~~~~~~~  158 (351)
T PLN02650         83 HVATPMDFE-SKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTVNVEEH---QKPVYDEDCWSDLDFCRRKKM  158 (351)
T ss_pred             EeCCCCCCC-CCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhcccCCC---CCCccCcccCCchhhhhcccc
Confidence            999875432 123334789999999999999999876 689999999765554321   222 45654432221   122


Q ss_pred             ccchHHHHHHHHHHHHHHHHHhCCccEEEEccCeeecCCCCCCCCccHHHHHHH--HcCCCCCCCCCchhhhhhhhhccc
Q 025755          158 TENYYCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTINTSSLLLLGF--LKGFFFTTPSHSYMLERTLVLNQG  235 (248)
Q Consensus       158 ~~~~Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~--~~~~~l~~~~~~~~~g~~l~vd~g  235 (248)
                      +.++|+.||.++|.++..++.+++++++++||+++|||.+...  ....++..+  ..+......  ..-.++.+||+|.
T Consensus       159 ~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~Gp~~~~~--~~~~~~~~~~~~~~~~~~~~--~~~~r~~v~V~Dv  234 (351)
T PLN02650        159 TGWMYFVSKTLAEKAAWKYAAENGLDFISIIPTLVVGPFISTS--MPPSLITALSLITGNEAHYS--IIKQGQFVHLDDL  234 (351)
T ss_pred             ccchHHHHHHHHHHHHHHHHHHcCCeEEEECCCceECCCCCCC--CCccHHHHHHHhcCCccccC--cCCCcceeeHHHH
Confidence            3457999999999999999988889999999999999986542  111222221  222211111  1113578999999


Q ss_pred             eeEEEeeccCC
Q 025755          236 VRLYRCKIQIP  246 (248)
Q Consensus       236 ~~~~~~~~~~p  246 (248)
                      +.++..++..+
T Consensus       235 a~a~~~~l~~~  245 (351)
T PLN02650        235 CNAHIFLFEHP  245 (351)
T ss_pred             HHHHHHHhcCc
Confidence            88877766543

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=99.97  E-value=7.5e-31  Score=224.51  Aligned_cols=229  Identities=18%  Similarity=0.202  Sum_probs=169.7

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCCeEEE-EEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCC--CCEEE
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGYMVHG-TVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAG--CTGVF   82 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~--id~vi   82 (248)
                      ||+||||||+||||++++++|+++|++|++ +++.............. ...++.++.+|++|.+++++++++  +|+||
T Consensus         1 ~~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~Vi   79 (355)
T PRK10217          1 MRKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVA-QSERFAFEKVDICDRAELARVFTEHQPDCVM   79 (355)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccccchhhhhhcc-cCCceEEEECCCcChHHHHHHHhhcCCCEEE
Confidence            479999999999999999999999988654 44432111111111111 124678899999999999999984  89999


Q ss_pred             EccccCCCCCCCCccccchhhhHHHHHHHHHHHHhc---------CCCEEEEEeccceeccCCCCCCCCccCCCCCCchh
Q 025755           83 HVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKA---------KVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEE  153 (248)
Q Consensus        83 ~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~---------~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~  153 (248)
                      |+||........+.+..++++|+.++.++++++.+.         +.+++|++||.. +|+... ....+++|+.+..+ 
T Consensus        80 h~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~-vyg~~~-~~~~~~~E~~~~~p-  156 (355)
T PRK10217         80 HLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDE-VYGDLH-STDDFFTETTPYAP-  156 (355)
T ss_pred             ECCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchh-hcCCCC-CCCCCcCCCCCCCC-
Confidence            999976543333455789999999999999999862         457999999965 555321 11345677665444 


Q ss_pred             hhccccchHHHHHHHHHHHHHHHHHhCCccEEEEccCeeecCCCCCCCCccHHHHHHHHcCCCCCCCCCchhhhhhhhhc
Q 025755          154 FCKATENYYCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKGFFFTTPSHSYMLERTLVLN  233 (248)
Q Consensus       154 ~~~~~~~~Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~l~vd  233 (248)
                           .+.|+.||.++|.++..++++++++++++||+++|||.+.+. ...+.++.+...+..+....++....+.+|||
T Consensus       157 -----~s~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~-~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~  230 (355)
T PRK10217        157 -----SSPYSASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFPE-KLIPLMILNALAGKPLPVYGNGQQIRDWLYVE  230 (355)
T ss_pred             -----CChhHHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCcc-cHHHHHHHHHhcCCCceEeCCCCeeeCcCcHH
Confidence                 455999999999999999888889999999999999987432 34566777777776555555555566889999


Q ss_pred             cceeEEEeecc
Q 025755          234 QGVRLYRCKIQ  244 (248)
Q Consensus       234 ~g~~~~~~~~~  244 (248)
                      |.+.++..+++
T Consensus       231 D~a~a~~~~~~  241 (355)
T PRK10217        231 DHARALYCVAT  241 (355)
T ss_pred             HHHHHHHHHHh
Confidence            99887765554

>PLN02583 cinnamoyl-CoA reductase

Probab=99.97  E-value=1.8e-30  Score=216.98  Aligned_cols=230  Identities=30%  Similarity=0.509  Sum_probs=168.3

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchh-hHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEE
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEK-NAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVF   82 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi   82 (248)
                      -.+|+|+||||+|+||++++++|+++|++|+++.|+..... ...+..+.....++.++++|++|.+++..++.++|.|+
T Consensus         4 ~~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l~~~d~v~   83 (297)
T PLN02583          4 ESSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDALKGCSGLF   83 (297)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCCHHHHHHHHcCCCEEE
Confidence            35789999999999999999999999999999998643211 12222222223568899999999999999999999999


Q ss_pred             EccccCCCCCCCCccccchhhhHHHHHHHHHHHHhc-CCCEEEEEeccceeccC-CCCCCCCccCCCCCCchhhhccccc
Q 025755           83 HVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKA-KVKRVVVVSSIGAVMLN-PNWPKGQVMDEECWSDEEFCKATEN  160 (248)
Q Consensus        83 ~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~-~~~~iV~vSS~~~~~~~-~~~~~~~~~~e~~~~~~~~~~~~~~  160 (248)
                      |.++.....  ...+.+++++|+.|+.++++++.+. +.++||++||..++... .......+++|++|..+.....+..
T Consensus        84 ~~~~~~~~~--~~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~SS~~a~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~  161 (297)
T PLN02583         84 CCFDPPSDY--PSYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLTAVIWRDDNISTQKDVDERSWSDQNFCRKFKL  161 (297)
T ss_pred             EeCccCCcc--cccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecchHheecccccCCCCCCCCcccCCCHHHHhhccc
Confidence            987654321  2234678999999999999999986 57899999998765422 1111245678887766555444445


Q ss_pred             hHHHHHHHHHHHHHHHHHhCCccEEEEccCeeecCCCCCCCCccHHHHHHHHcCCCCCCCCCchhhhhhhhhccceeEEE
Q 025755          161 YYCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKGFFFTTPSHSYMLERTLVLNQGVRLYR  240 (248)
Q Consensus       161 ~Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~l~vd~g~~~~~  240 (248)
                      +|+.||.++|.++..++++.+++++++||+++|||......    .    ...+.........   -..++|||...++.
T Consensus       162 ~Y~~sK~~aE~~~~~~~~~~gi~~v~lrp~~v~Gp~~~~~~----~----~~~~~~~~~~~~~---~~~v~V~Dva~a~~  230 (297)
T PLN02583        162 WHALAKTLSEKTAWALAMDRGVNMVSINAGLLMGPSLTQHN----P----YLKGAAQMYENGV---LVTVDVNFLVDAHI  230 (297)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCcEEEEcCCcccCCCCCCch----h----hhcCCcccCcccC---cceEEHHHHHHHHH
Confidence            79999999999999998777899999999999999764321    1    1222111111111   13689999988888


Q ss_pred             eeccCC
Q 025755          241 CKIQIP  246 (248)
Q Consensus       241 ~~~~~p  246 (248)
                      ++++.|
T Consensus       231 ~al~~~  236 (297)
T PLN02583        231 RAFEDV  236 (297)
T ss_pred             HHhcCc
Confidence            777654

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=99.97  E-value=9e-31  Score=223.42  Aligned_cols=229  Identities=16%  Similarity=0.165  Sum_probs=171.8

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHC-CCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCC-CHHHHHHHhCCCCEEEE
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLK-GYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLL-DYEALCAATAGCTGVFH   83 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~-d~~~~~~~~~~id~vi~   83 (248)
                      ||+|+||||+|+||++++++|+++ |++|++++|+...     ...+.. ...+.++.+|++ +.+.+.++++++|+|||
T Consensus         1 m~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~-----~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~d~ViH   74 (347)
T PRK11908          1 MKKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDR-----LGDLVN-HPRMHFFEGDITINKEWIEYHVKKCDVILP   74 (347)
T ss_pred             CcEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHH-----HHHhcc-CCCeEEEeCCCCCCHHHHHHHHcCCCEEEE
Confidence            368999999999999999999986 6999999986421     111111 246899999998 77788888899999999


Q ss_pred             ccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCc-hhhhccccchH
Q 025755           84 VACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSD-EEFCKATENYY  162 (248)
Q Consensus        84 ~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~-~~~~~~~~~~Y  162 (248)
                      +|+...+......+...+++|+.++.+++++|++.+ +++||+||.. +|+...   ..+++|+.+.. .....+|.+.|
T Consensus        75 ~aa~~~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~~-~~~v~~SS~~-vyg~~~---~~~~~ee~~~~~~~~~~~p~~~Y  149 (347)
T PRK11908         75 LVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG-KHLVFPSTSE-VYGMCP---DEEFDPEASPLVYGPINKPRWIY  149 (347)
T ss_pred             CcccCChHHhhcCcHHHHHHHHHHHHHHHHHHHhcC-CeEEEEecce-eeccCC---CcCcCccccccccCcCCCccchH
Confidence            999765443344557788999999999999999887 7999999975 555422   33455554321 11122456679


Q ss_pred             HHHHHHHHHHHHHHHHhCCccEEEEccCeeecCCCCCC-------CCccHHHHHHHHcCCCCCCCCCchhhhhhhhhccc
Q 025755          163 CLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPT-------INTSSLLLLGFLKGFFFTTPSHSYMLERTLVLNQG  235 (248)
Q Consensus       163 ~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~-------~~~~~~~~~~~~~~~~l~~~~~~~~~g~~l~vd~g  235 (248)
                      +.||.++|.++..++.++++++.++||+.+|||...+.       ......++.++..+..+.....+....+.+||+|.
T Consensus       150 ~~sK~~~e~~~~~~~~~~~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~g~~~r~~i~v~D~  229 (347)
T PRK11908        150 ACSKQLMDRVIWAYGMEEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEPISLVDGGSQKRAFTDIDDG  229 (347)
T ss_pred             HHHHHHHHHHHHHHHHHcCCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHHhCCCceEEecCCceeeccccHHHH
Confidence            99999999999999988889999999999999975431       22345677777777765555455556678999999


Q ss_pred             eeEEEeeccC
Q 025755          236 VRLYRCKIQI  245 (248)
Q Consensus       236 ~~~~~~~~~~  245 (248)
                      ..++..++..
T Consensus       230 a~a~~~~~~~  239 (347)
T PRK11908        230 IDALMKIIEN  239 (347)
T ss_pred             HHHHHHHHhC
Confidence            8877665554

>PRK06114 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.6e-30  Score=212.68  Aligned_cols=219  Identities=16%  Similarity=0.109  Sum_probs=156.6

Q ss_pred             CCCCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC----
Q 025755            1 MSGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA----   76 (248)
Q Consensus         1 m~~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~----   76 (248)
                      |..+++|+++||||+++||++++++|+++|++|++++|+.++......+.+.....++.++.+|++|+++++++++    
T Consensus         3 ~~~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~   82 (254)
T PRK06114          3 LFDLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEA   82 (254)
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            3457899999999999999999999999999999999976433333334444444578889999999998887765    


Q ss_pred             ---CCCEEEEccccCCCCC----CCCccccchhhhHHHHHHHHHHHH----hcCCCEEEEEeccceeccCCCCCCCCccC
Q 025755           77 ---GCTGVFHVACPVPVGK----VPNPEVQLIDPAVVGTKNVLNSCV----KAKVKRVVVVSSIGAVMLNPNWPKGQVMD  145 (248)
Q Consensus        77 ---~id~vi~~ag~~~~~~----~~~~~~~~~~~n~~g~~~~~~~~~----~~~~~~iV~vSS~~~~~~~~~~~~~~~~~  145 (248)
                         .+|+||||||......    ..++++.++++|+.++..+++++.    +.+.++||++||..+..+.+...      
T Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~------  156 (254)
T PRK06114         83 ELGALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGIIVNRGLL------  156 (254)
T ss_pred             HcCCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCCCC------
Confidence               4799999999765332    124457789999999987777654    34567999999987665443210      


Q ss_pred             CCCCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCC-CCC-ccHHHHHHHHcCC-----
Q 025755          146 EECWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQP-TIN-TSSLLLLGFLKGF-----  215 (248)
Q Consensus       146 e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~-~~~-~~~~~~~~~~~~~-----  215 (248)
                                   ...|+.+|++.+.+.+.++.+   .|+||++|+||.+.+++... ... ....+......++     
T Consensus       157 -------------~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~p~~r~~~~~  223 (254)
T PRK06114        157 -------------QAHYNASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPMNTRPEMVHQTKLFEEQTPMQRMAKVD  223 (254)
T ss_pred             -------------cchHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCcccccccchHHHHHHHhcCCCCCCcCHH
Confidence                         123999998655555555432   36999999999999997542 110 0011111111111     


Q ss_pred             -------CCCCCCCchhhhhhhhhccceeE
Q 025755          216 -------FFTTPSHSYMLERTLVLNQGVRL  238 (248)
Q Consensus       216 -------~l~~~~~~~~~g~~l~vd~g~~~  238 (248)
                             |+.++.+.|+||+++.+|||..+
T Consensus       224 dva~~~~~l~s~~~~~~tG~~i~~dgg~~~  253 (254)
T PRK06114        224 EMVGPAVFLLSDAASFCTGVDLLVDGGFVC  253 (254)
T ss_pred             HHHHHHHHHcCccccCcCCceEEECcCEec
Confidence                   77788889999999999999865

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=99.97  E-value=1.2e-30  Score=195.64  Aligned_cols=207  Identities=21%  Similarity=0.209  Sum_probs=166.4

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-------
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-------   76 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-------   76 (248)
                      ++.|+++||||++|||+++++.|+++|++|.+.+++.. ..+.....+.+ +++-..+.||+.+.++++..++       
T Consensus        12 ~~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~-~A~ata~~L~g-~~~h~aF~~DVS~a~~v~~~l~e~~k~~g   89 (256)
T KOG1200|consen   12 LMSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSA-AAEATAGDLGG-YGDHSAFSCDVSKAHDVQNTLEEMEKSLG   89 (256)
T ss_pred             HhcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchh-hHHHHHhhcCC-CCccceeeeccCcHHHHHHHHHHHHHhcC
Confidence            46789999999999999999999999999999999875 33344444444 3566778999999998888665       


Q ss_pred             CCCEEEEccccCCCCC----CCCccccchhhhHHHHHHHHHHHHhc------CCCEEEEEeccceeccCCCCCCCCccCC
Q 025755           77 GCTGVFHVACPVPVGK----VPNPEVQLIDPAVVGTKNVLNSCVKA------KVKRVVVVSSIGAVMLNPNWPKGQVMDE  146 (248)
Q Consensus        77 ~id~vi~~ag~~~~~~----~~~~~~~~~~~n~~g~~~~~~~~~~~------~~~~iV~vSS~~~~~~~~~~~~~~~~~e  146 (248)
                      .++++|||||+.....    .++.|++.+.+|+.|++.+.+++.+.      +..+||++||+.+..++.++.-      
T Consensus        90 ~psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGkiGN~GQtn------  163 (256)
T KOG1200|consen   90 TPSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIGNFGQTN------  163 (256)
T ss_pred             CCcEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhcccccccchh------
Confidence            4799999999976542    25778899999999998888777543      3349999999998888765433      


Q ss_pred             CCCCchhhhccccchHHHHHH----HHHHHHHHHHHhCCccEEEEccCeeecCCCCCCCCccHHHHHHHHcCC-------
Q 025755          147 ECWSDEEFCKATENYYCLAKT----IAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKGF-------  215 (248)
Q Consensus       147 ~~~~~~~~~~~~~~~Y~~sK~----~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~~~-------  215 (248)
                                     |+.+|.    +++.+++++++++ ||||.|.||.|-+|+...-   .+..+.++....       
T Consensus       164 ---------------YAAsK~GvIgftktaArEla~kn-IrvN~VlPGFI~tpMT~~m---p~~v~~ki~~~iPmgr~G~  224 (256)
T KOG1200|consen  164 ---------------YAASKGGVIGFTKTAARELARKN-IRVNVVLPGFIATPMTEAM---PPKVLDKILGMIPMGRLGE  224 (256)
T ss_pred             ---------------hhhhcCceeeeeHHHHHHHhhcC-ceEeEeccccccChhhhhc---CHHHHHHHHccCCccccCC
Confidence                           999994    9999999999987 9999999999999997642   234444443332       


Q ss_pred             ---------CCCCCCCchhhhhhhhhcccee
Q 025755          216 ---------FFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       216 ---------~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                               ||.++.++|+||+.+-|+||..
T Consensus       225 ~EevA~~V~fLAS~~ssYiTG~t~evtGGl~  255 (256)
T KOG1200|consen  225 AEEVANLVLFLASDASSYITGTTLEVTGGLA  255 (256)
T ss_pred             HHHHHHHHHHHhccccccccceeEEEecccc
Confidence                     8999999999999999999853

>PRK07063 short chain dehydrogenase; Provisional

Probab=99.97  E-value=4.9e-30  Score=210.37  Aligned_cols=216  Identities=13%  Similarity=0.047  Sum_probs=156.4

Q ss_pred             CCCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcC--CCCCeEEEEccCCCHHHHHHHhC---
Q 025755            2 SGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEG--ASENLQLFKTDLLDYEALCAATA---   76 (248)
Q Consensus         2 ~~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~Di~d~~~~~~~~~---   76 (248)
                      .++++|+++||||+||||+++++.|+++|++|++++|+.+. .....+.+..  ...++.++.+|++|.++++.+++   
T Consensus         3 ~~l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   81 (260)
T PRK07063          3 NRLAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAAL-AERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAE   81 (260)
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999997642 2233333332  24568899999999998888775   


Q ss_pred             ----CCCEEEEccccCCCCC----CCCccccchhhhHHHHHHHHHHHHh----cCCCEEEEEeccceeccCCCCCCCCcc
Q 025755           77 ----GCTGVFHVACPVPVGK----VPNPEVQLIDPAVVGTKNVLNSCVK----AKVKRVVVVSSIGAVMLNPNWPKGQVM  144 (248)
Q Consensus        77 ----~id~vi~~ag~~~~~~----~~~~~~~~~~~n~~g~~~~~~~~~~----~~~~~iV~vSS~~~~~~~~~~~~~~~~  144 (248)
                          .+|++|||||......    ..+.+...+++|+.++.++++++.+    .+.++||++||..+..+.+...     
T Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~-----  156 (260)
T PRK07063         82 EAFGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFKIIPGCF-----  156 (260)
T ss_pred             HHhCCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhccCCCCch-----
Confidence                5899999999754322    1245567899999999888888754    3557999999987665544322     


Q ss_pred             CCCCCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCC---CccHHHH----HHHHcC
Q 025755          145 DEECWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTI---NTSSLLL----LGFLKG  214 (248)
Q Consensus       145 ~e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~---~~~~~~~----~~~~~~  214 (248)
                                      +|+.||++.+.+.+.++.+   .||||++|+||.+.+++.....   .......    .....+
T Consensus       157 ----------------~Y~~sKaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (260)
T PRK07063        157 ----------------PYPVAKHGLLGLTRALGIEYAARNVRVNAIAPGYIETQLTEDWWNAQPDPAAARAETLALQPMK  220 (260)
T ss_pred             ----------------HHHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccChhhhhhhhccCChHHHHHHHHhcCCCC
Confidence                            3999998666665555543   2699999999999998643210   0000011    111111


Q ss_pred             C------------CCCCCCCchhhhhhhhhccceeEE
Q 025755          215 F------------FFTTPSHSYMLERTLVLNQGVRLY  239 (248)
Q Consensus       215 ~------------~l~~~~~~~~~g~~l~vd~g~~~~  239 (248)
                      +            |+.++...|++|+.+.+|||.++.
T Consensus       221 r~~~~~~va~~~~fl~s~~~~~itG~~i~vdgg~~~~  257 (260)
T PRK07063        221 RIGRPEEVAMTAVFLASDEAPFINATCITIDGGRSVL  257 (260)
T ss_pred             CCCCHHHHHHHHHHHcCccccccCCcEEEECCCeeee
Confidence            1            777888899999999999998754

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=99.97  E-value=3.2e-30  Score=219.66  Aligned_cols=229  Identities=17%  Similarity=0.084  Sum_probs=170.2

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcC-----CCCCeEEEEccCCCHHHHHHHhCC--CC
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEG-----ASENLQLFKTDLLDYEALCAATAG--CT   79 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~~Di~d~~~~~~~~~~--id   79 (248)
                      |+||||||+||||++++++|+++|++|++++|+...........+..     ...++.++++|++|.+.+.+++++  +|
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d   80 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEIKPT   80 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhCCCC
Confidence            68999999999999999999999999999998763211111111110     124688999999999999999985  69


Q ss_pred             EEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCC---CEEEEEeccceeccCCCCCCCCccCCCCCCchhhhc
Q 025755           80 GVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKV---KRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCK  156 (248)
Q Consensus        80 ~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~---~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~  156 (248)
                      +|||+|+..............+++|+.|+.+++++|++.+.   .++||+||.. +|+...   ..+++|+.+..+    
T Consensus        81 ~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~~~~~v~~SS~~-vyg~~~---~~~~~E~~~~~p----  152 (343)
T TIGR01472        81 EIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLGLIKSVKFYQASTSE-LYGKVQ---EIPQNETTPFYP----  152 (343)
T ss_pred             EEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHhCCCcCeeEEEeccHH-hhCCCC---CCCCCCCCCCCC----
Confidence            99999997654322333356778999999999999998765   3899999965 555432   345677765543    


Q ss_pred             cccchHHHHHHHHHHHHHHHHHhCCccEEEEccCeeecCCCCCC--CCccHHHHHHHHcCCC-CCCCCCchhhhhhhhhc
Q 025755          157 ATENYYCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPT--INTSSLLLLGFLKGFF-FTTPSHSYMLERTLVLN  233 (248)
Q Consensus       157 ~~~~~Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~--~~~~~~~~~~~~~~~~-l~~~~~~~~~g~~l~vd  233 (248)
                        .++|+.||..+|.+++.++.++++++...|+.++|||.....  ......++.++..++. ....+++....+.+|||
T Consensus       153 --~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~V~  230 (343)
T TIGR01472       153 --RSPYAAAKLYAHWITVNYREAYGLFAVNGILFNHESPRRGENFVTRKITRAAAKIKLGLQEKLYLGNLDAKRDWGHAK  230 (343)
T ss_pred             --CChhHHHHHHHHHHHHHHHHHhCCceEEEeecccCCCCCCccccchHHHHHHHHHHcCCCCceeeCCCccccCceeHH
Confidence              456999999999999999988889999999999999974322  1223445556666653 23335566677889999


Q ss_pred             cceeEEEeeccC
Q 025755          234 QGVRLYRCKIQI  245 (248)
Q Consensus       234 ~g~~~~~~~~~~  245 (248)
                      |.+.++..+++.
T Consensus       231 D~a~a~~~~~~~  242 (343)
T TIGR01472       231 DYVEAMWLMLQQ  242 (343)
T ss_pred             HHHHHHHHHHhc
Confidence            999888776654

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=99.97  E-value=1.3e-29  Score=216.84  Aligned_cols=239  Identities=37%  Similarity=0.536  Sum_probs=162.4

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEEc
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFHV   84 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~~   84 (248)
                      ++++||||||+||||++++++|+++|++|++++|+... .......+.. ..++.++.+|++|.+++.++++++|+|||+
T Consensus         9 ~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~-~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~   86 (353)
T PLN02896          9 ATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAK-SLHLLSKWKE-GDRLRLFRADLQEEGSFDEAVKGCDGVFHV   86 (353)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHH-HHHHHHhhcc-CCeEEEEECCCCCHHHHHHHHcCCCEEEEC
Confidence            46899999999999999999999999999999887532 2222222222 356889999999999999999999999999


Q ss_pred             cccCCCCC--CCCcccc-----chhhhHHHHHHHHHHHHhcC-CCEEEEEeccceeccCCCC-CCCCccCCCCCCchhh-
Q 025755           85 ACPVPVGK--VPNPEVQ-----LIDPAVVGTKNVLNSCVKAK-VKRVVVVSSIGAVMLNPNW-PKGQVMDEECWSDEEF-  154 (248)
Q Consensus        85 ag~~~~~~--~~~~~~~-----~~~~n~~g~~~~~~~~~~~~-~~~iV~vSS~~~~~~~~~~-~~~~~~~e~~~~~~~~-  154 (248)
                      |+......  ....+..     +++.|+.++.+++++|.+.+ .++||++||.+.+...+.. ....+++|+.+...+. 
T Consensus        87 A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~~~E~~~~p~~~~  166 (353)
T PLN02896         87 AASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFTSSISTLTAKDSNGRWRAVVDETCQTPIDHV  166 (353)
T ss_pred             CccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEEechhhccccccCCCCCCccCcccCCcHHHh
Confidence            99765432  1122232     44566799999999998874 7899999997644322210 0114566663321110 


Q ss_pred             --hccccchHHHHHHHHHHHHHHHHHhCCccEEEEccCeeecCCCCCCCCccHHHHHHHHcCCCCCCC--CC---chhhh
Q 025755          155 --CKATENYYCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKGFFFTTP--SH---SYMLE  227 (248)
Q Consensus       155 --~~~~~~~Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~~~~l~~~--~~---~~~~g  227 (248)
                        ...+..+|+.||.++|.++..++++++++++++||+++|||.+..........+.....+.....+  ..   ...+.
T Consensus       167 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~  246 (353)
T PLN02896        167 WNTKASGWVYVLSKLLTEEAAFKYAKENGIDLVSVITTTVAGPFLTPSVPSSIQVLLSPITGDSKLFSILSAVNSRMGSI  246 (353)
T ss_pred             hccCCCCccHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCcCCCCCchHHHHHHHhcCCccccccccccccccCce
Confidence              112345699999999999999999888999999999999998754322211112222233321111  11   11134


Q ss_pred             hhhhhccceeEEEeeccC
Q 025755          228 RTLVLNQGVRLYRCKIQI  245 (248)
Q Consensus       228 ~~l~vd~g~~~~~~~~~~  245 (248)
                      +.++|||.+.++..++..
T Consensus       247 dfi~v~Dva~a~~~~l~~  264 (353)
T PLN02896        247 ALVHIEDICDAHIFLMEQ  264 (353)
T ss_pred             eEEeHHHHHHHHHHHHhC
Confidence            678999988877666553

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.97  E-value=4.8e-30  Score=209.49  Aligned_cols=211  Identities=11%  Similarity=0.102  Sum_probs=152.4

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC------
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA------   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~------   76 (248)
                      .+++|+++||||++|||++++++|+++|++|++++|+..+.   ..+.......++.++.+|++|.++++++++      
T Consensus         5 ~l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~---~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   81 (251)
T PRK12481          5 DLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPE---TQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVM   81 (251)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHH---HHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHc
Confidence            47789999999999999999999999999999988864221   122222234578899999999999888875      


Q ss_pred             -CCCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHHh----cC-CCEEEEEeccceeccCCCCCCCCccCC
Q 025755           77 -GCTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCVK----AK-VKRVVVVSSIGAVMLNPNWPKGQVMDE  146 (248)
Q Consensus        77 -~id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~~----~~-~~~iV~vSS~~~~~~~~~~~~~~~~~e  146 (248)
                       ++|++|||||.......    .+.|+..+++|+.++..+.+++.+    .+ .++||++||..++.+.+....      
T Consensus        82 g~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~------  155 (251)
T PRK12481         82 GHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGGIRVPS------  155 (251)
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCCCCCcc------
Confidence             48999999997654321    345677899999998888877654    23 479999999877665544333      


Q ss_pred             CCCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCCCcc---HHHHHHHHcCC-----
Q 025755          147 ECWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTINTS---SLLLLGFLKGF-----  215 (248)
Q Consensus       147 ~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~~~~---~~~~~~~~~~~-----  215 (248)
                                     |+.||++.+.+.+.++.+   +|+|||+|+||.+.+++........   .....+...++     
T Consensus       156 ---------------Y~asK~a~~~l~~~la~e~~~~girvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~pe  220 (251)
T PRK12481        156 ---------------YTASKSAVMGLTRALATELSQYNINVNAIAPGYMATDNTAALRADTARNEAILERIPASRWGTPD  220 (251)
T ss_pred             ---------------hHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCCccCchhhcccChHHHHHHHhcCCCCCCcCHH
Confidence                           999997555555444432   3699999999999998643211000   01111111111     


Q ss_pred             -------CCCCCCCchhhhhhhhhcccee
Q 025755          216 -------FFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       216 -------~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                             |+.++...+++|+.+.+|||+.
T Consensus       221 eva~~~~~L~s~~~~~~~G~~i~vdgg~~  249 (251)
T PRK12481        221 DLAGPAIFLSSSASDYVTGYTLAVDGGWL  249 (251)
T ss_pred             HHHHHHHHHhCccccCcCCceEEECCCEe
Confidence                   7788889999999999999964

>PRK05867 short chain dehydrogenase; Provisional

Probab=99.97  E-value=4e-30  Score=210.13  Aligned_cols=215  Identities=16%  Similarity=0.175  Sum_probs=152.6

Q ss_pred             CCCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-----
Q 025755            2 SGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-----   76 (248)
Q Consensus         2 ~~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-----   76 (248)
                      +.+++|+++||||+|+||+++++.|+++|++|++++|+..+ .+...+.+.....++..+.+|++|.++++++++     
T Consensus         5 ~~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   83 (253)
T PRK05867          5 FDLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDA-LEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAE   83 (253)
T ss_pred             ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHH-HHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence            34788999999999999999999999999999999997643 223333333334578889999999998888765     


Q ss_pred             --CCCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHHhc----C-CCEEEEEeccceeccC-CCCCCCCcc
Q 025755           77 --GCTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCVKA----K-VKRVVVVSSIGAVMLN-PNWPKGQVM  144 (248)
Q Consensus        77 --~id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~~~----~-~~~iV~vSS~~~~~~~-~~~~~~~~~  144 (248)
                        ++|++|||||.......    .+.+..++++|+.++..+++++.+.    + .++||++||..+.... +..      
T Consensus        84 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~------  157 (253)
T PRK05867         84 LGGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIINVPQQ------  157 (253)
T ss_pred             hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCCCCCCC------
Confidence              68999999997654321    2345677899999999888887543    2 3689999986643221 100      


Q ss_pred             CCCCCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCCCccHHHHHHHHcCC------
Q 025755          145 DEECWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKGF------  215 (248)
Q Consensus       145 ~e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~~~------  215 (248)
                                    ...|+.||++.+.+.+.++.+   .|++||+|+||.+.+++..........+......++      
T Consensus       158 --------------~~~Y~asKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~r~~~p~~  223 (253)
T PRK05867        158 --------------VSHYCASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVEPYTEYQPLWEPKIPLGRLGRPEE  223 (253)
T ss_pred             --------------ccchHHHHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCcccccchHHHHHHHhcCCCCCCcCHHH
Confidence                          123999997555555555433   269999999999999875432111111111111111      


Q ss_pred             ------CCCCCCCchhhhhhhhhcccee
Q 025755          216 ------FFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       216 ------~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                            |+.++...|+||+++.+|||++
T Consensus       224 va~~~~~L~s~~~~~~tG~~i~vdgG~~  251 (253)
T PRK05867        224 LAGLYLYLASEASSYMTGSDIVIDGGYT  251 (253)
T ss_pred             HHHHHHHHcCcccCCcCCCeEEECCCcc
Confidence                  7888889999999999999975

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=99.97  E-value=2.7e-30  Score=236.72  Aligned_cols=230  Identities=16%  Similarity=0.183  Sum_probs=175.4

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHC-CCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHH-HHHHhCCCCEEE
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLK-GYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEA-LCAATAGCTGVF   82 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~-~~~~~~~id~vi   82 (248)
                      ++|+|+||||+||||+++++.|+++ |++|++++|..... ..    ... .+++.++.+|++|.+. ++++++++|+||
T Consensus       314 ~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~-~~----~~~-~~~~~~~~gDl~d~~~~l~~~l~~~D~Vi  387 (660)
T PRK08125        314 RRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAI-SR----FLG-HPRFHFVEGDISIHSEWIEYHIKKCDVVL  387 (660)
T ss_pred             cCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhh-hh----hcC-CCceEEEeccccCcHHHHHHHhcCCCEEE
Confidence            4689999999999999999999986 79999999875321 11    111 2468899999998655 677888999999


Q ss_pred             EccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhh-ccccch
Q 025755           83 HVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFC-KATENY  161 (248)
Q Consensus        83 ~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~-~~~~~~  161 (248)
                      |+|+...+......+..++++|+.++.+++++|++.+ +++||+||.. +|+...   ..+++|+++..+..+ ..|.+.
T Consensus       388 HlAa~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~~-~~~V~~SS~~-vyg~~~---~~~~~E~~~~~~~~p~~~p~s~  462 (660)
T PRK08125        388 PLVAIATPIEYTRNPLRVFELDFEENLKIIRYCVKYN-KRIIFPSTSE-VYGMCT---DKYFDEDTSNLIVGPINKQRWI  462 (660)
T ss_pred             ECccccCchhhccCHHHHHHhhHHHHHHHHHHHHhcC-CeEEEEcchh-hcCCCC---CCCcCccccccccCCCCCCccc
Confidence            9999766543334446788999999999999999987 7999999965 555432   346777765422111 234567


Q ss_pred             HHHHHHHHHHHHHHHHHhCCccEEEEccCeeecCCCCCC-------CCccHHHHHHHHcCCCCCCCCCchhhhhhhhhcc
Q 025755          162 YCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPT-------INTSSLLLLGFLKGFFFTTPSHSYMLERTLVLNQ  234 (248)
Q Consensus       162 Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~-------~~~~~~~~~~~~~~~~l~~~~~~~~~g~~l~vd~  234 (248)
                      |+.||.++|.++..++++++++++++||+++|||.+...       ......++.++..++.+...+++....+.++|+|
T Consensus       463 Yg~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~~~~~~~~i~~~g~g~~~rd~i~v~D  542 (660)
T PRK08125        463 YSVSKQLLDRVIWAYGEKEGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLVDGGKQKRCFTDIRD  542 (660)
T ss_pred             hHHHHHHHHHHHHHHHHhcCCceEEEEEceeeCCCccccccccccccchHHHHHHHhcCCCCeEEeCCCceeeceeeHHH
Confidence            999999999999999988889999999999999976421       1345667777777776555555556677899999


Q ss_pred             ceeEEEeeccC
Q 025755          235 GVRLYRCKIQI  245 (248)
Q Consensus       235 g~~~~~~~~~~  245 (248)
                      .+.++..+++.
T Consensus       543 va~a~~~~l~~  553 (660)
T PRK08125        543 GIEALFRIIEN  553 (660)
T ss_pred             HHHHHHHHHhc
Confidence            98887776654

>PRK06128 oxidoreductase; Provisional

Probab=99.97  E-value=1.4e-29  Score=211.85  Aligned_cols=213  Identities=13%  Similarity=0.091  Sum_probs=156.6

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCch-hhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-----
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDE-KNAHLKKLEGASENLQLFKTDLLDYEALCAATA-----   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-----   76 (248)
                      .+++|++|||||+||||+++++.|+++|++|++.+++.... .....+.+.....++.++.+|++|.++++++++     
T Consensus        52 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  131 (300)
T PRK06128         52 RLQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKE  131 (300)
T ss_pred             ccCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHH
Confidence            36789999999999999999999999999999988765322 122223333334568889999999998887765     


Q ss_pred             --CCCEEEEccccCCCCC-----CCCccccchhhhHHHHHHHHHHHHhc--CCCEEEEEeccceeccCCCCCCCCccCCC
Q 025755           77 --GCTGVFHVACPVPVGK-----VPNPEVQLIDPAVVGTKNVLNSCVKA--KVKRVVVVSSIGAVMLNPNWPKGQVMDEE  147 (248)
Q Consensus        77 --~id~vi~~ag~~~~~~-----~~~~~~~~~~~n~~g~~~~~~~~~~~--~~~~iV~vSS~~~~~~~~~~~~~~~~~e~  147 (248)
                        ++|+||||||......     ..+.+..++++|+.++.++++++.+.  ..++||++||..++.+.+....       
T Consensus       132 ~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~-------  204 (300)
T PRK06128        132 LGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQSYQPSPTLLD-------  204 (300)
T ss_pred             hCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccccCCCCCchh-------
Confidence              5899999999753221     23456789999999999999999864  3469999999877665544333       


Q ss_pred             CCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCCCccHHHHHHHHc----CC-----
Q 025755          148 CWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLK----GF-----  215 (248)
Q Consensus       148 ~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~----~~-----  215 (248)
                                    |+.||++.+.+++.++.+   .|++|++|+||.+.+|+.... .........+..    ++     
T Consensus       205 --------------Y~asK~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~~~-~~~~~~~~~~~~~~p~~r~~~p~  269 (300)
T PRK06128        205 --------------YASTKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQPSG-GQPPEKIPDFGSETPMKRPGQPV  269 (300)
T ss_pred             --------------HHHHHHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCcccC-CCCHHHHHHHhcCCCCCCCcCHH
Confidence                          999998777777666654   369999999999999975321 111122222111    11     


Q ss_pred             -------CCCCCCCchhhhhhhhhcccee
Q 025755          216 -------FFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       216 -------~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                             ++.++...|++|+++.+|||..
T Consensus       270 dva~~~~~l~s~~~~~~~G~~~~v~gg~~  298 (300)
T PRK06128        270 EMAPLYVLLASQESSYVTGEVFGVTGGLL  298 (300)
T ss_pred             HHHHHHHHHhCccccCccCcEEeeCCCEe
Confidence                   6667778899999999999964

>PRK07478 short chain dehydrogenase; Provisional

Probab=99.97  E-value=9e-30  Score=208.12  Aligned_cols=217  Identities=14%  Similarity=0.084  Sum_probs=155.5

Q ss_pred             CCCCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC----
Q 025755            1 MSGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA----   76 (248)
Q Consensus         1 m~~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~----   76 (248)
                      |+++++|+++||||+||||+++++.|+++|++|++++|+..+ .....+.+.....++.++.+|++|.++++++++    
T Consensus         1 ~~~~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   79 (254)
T PRK07478          1 MMRLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAE-LDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVE   79 (254)
T ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            677889999999999999999999999999999999998643 223333343334578899999999998888775    


Q ss_pred             ---CCCEEEEccccCCCC-C----CCCccccchhhhHHHHHHHHHHH----HhcCCCEEEEEecccee-ccCCCCCCCCc
Q 025755           77 ---GCTGVFHVACPVPVG-K----VPNPEVQLIDPAVVGTKNVLNSC----VKAKVKRVVVVSSIGAV-MLNPNWPKGQV  143 (248)
Q Consensus        77 ---~id~vi~~ag~~~~~-~----~~~~~~~~~~~n~~g~~~~~~~~----~~~~~~~iV~vSS~~~~-~~~~~~~~~~~  143 (248)
                         ++|+||||||..... .    ..+.+...+++|+.++..+.+++    ++.+.++||++||..++ .+.+.+.    
T Consensus        80 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~----  155 (254)
T PRK07478         80 RFGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVGHTAGFPGMA----  155 (254)
T ss_pred             hcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHhhccCCCCcc----
Confidence               589999999975321 1    12345778999999887775554    44566899999997654 2333322    


Q ss_pred             cCCCCCCchhhhccccchHHHHHHHHHHHHHHHHHhC---CccEEEEccCeeecCCCCCCCCc--cHHHHHHHH-cC---
Q 025755          144 MDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKRG---ELDIVTVCPSIVIGPMLQPTINT--SSLLLLGFL-KG---  214 (248)
Q Consensus       144 ~~e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~---~i~v~~vrpg~i~g~~~~~~~~~--~~~~~~~~~-~~---  214 (248)
                                       .|+.||++.+.+++.++.+.   +++|++|+||.+.+++.......  ...++.... .+   
T Consensus       156 -----------------~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (254)
T PRK07478        156 -----------------AYAASKAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTPMGRAMGDTPEALAFVAGLHALKRMA  218 (254)
T ss_pred             -----------------hhHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCcccCcccccccCCHHHHHHHHhcCCCCCCc
Confidence                             39999986666666655442   59999999999999864322111  011111110 01   


Q ss_pred             ---------CCCCCCCCchhhhhhhhhccceeEE
Q 025755          215 ---------FFFTTPSHSYMLERTLVLNQGVRLY  239 (248)
Q Consensus       215 ---------~~l~~~~~~~~~g~~l~vd~g~~~~  239 (248)
                               .++.++...|++|+++.+|||..+.
T Consensus       219 ~~~~va~~~~~l~s~~~~~~~G~~~~~dgg~~~~  252 (254)
T PRK07478        219 QPEEIAQAALFLASDAASFVTGTALLVDGGVSIT  252 (254)
T ss_pred             CHHHHHHHHHHHcCchhcCCCCCeEEeCCchhcc
Confidence                     1667777889999999999997643

>PLN02686 cinnamoyl-CoA reductase

Probab=99.97  E-value=1.3e-29  Score=217.40  Aligned_cols=234  Identities=27%  Similarity=0.436  Sum_probs=170.0

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcC------CCCCeEEEEccCCCHHHHHHHhCC
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEG------ASENLQLFKTDLLDYEALCAATAG   77 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~~Di~d~~~~~~~~~~   77 (248)
                      +++|+||||||+||||++++++|+++|++|+++.|+....  ..+..+..      ...++.++.+|++|.+++.+++++
T Consensus        51 ~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~--~~l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~~  128 (367)
T PLN02686         51 AEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDK--EKLREMEMFGEMGRSNDGIWTVMANLTEPESLHEAFDG  128 (367)
T ss_pred             CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHH--HHHHHHhhhccccccCCceEEEEcCCCCHHHHHHHHHh
Confidence            5789999999999999999999999999999988875321  11122211      013578899999999999999999


Q ss_pred             CCEEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhc-CCCEEEEEeccc-eeccCC-CCCCCCccCCCCCCchhh
Q 025755           78 CTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKA-KVKRVVVVSSIG-AVMLNP-NWPKGQVMDEECWSDEEF  154 (248)
Q Consensus        78 id~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~-~~~~iV~vSS~~-~~~~~~-~~~~~~~~~e~~~~~~~~  154 (248)
                      +|.|||+|+...............++|+.++.++++++++. +++++|++||.. .+|+.. ......+++|+.+..++.
T Consensus       129 ~d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~v~r~V~~SS~~~~vyg~~~~~~~~~~i~E~~~~~~~~  208 (367)
T PLN02686        129 CAGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTESVRKCVFTSSLLACVWRQNYPHDLPPVIDEESWSDESF  208 (367)
T ss_pred             ccEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCCccEEEEeccHHHhcccccCCCCCCcccCCCCCCChhh
Confidence            99999999976443211222456788999999999999986 789999999964 344421 101013467776665555


Q ss_pred             hccccchHHHHHHHHHHHHHHHHHhCCccEEEEccCeeecCCCCCCCCccHHHHHHHHcCCCCCCCCCchhhhhhhhhcc
Q 025755          155 CKATENYYCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKGFFFTTPSHSYMLERTLVLNQ  234 (248)
Q Consensus       155 ~~~~~~~Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~l~vd~  234 (248)
                      +..+.++|+.||..+|.++..++.+++++++++||+++|||.+.....   ..+.....+... ...++.  .+.++|||
T Consensus       209 ~~~p~~~Y~~sK~~~E~~~~~~~~~~gl~~v~lRp~~vyGp~~~~~~~---~~~~~~~~g~~~-~~g~g~--~~~v~V~D  282 (367)
T PLN02686        209 CRDNKLWYALGKLKAEKAAWRAARGKGLKLATICPALVTGPGFFRRNS---TATIAYLKGAQE-MLADGL--LATADVER  282 (367)
T ss_pred             cccccchHHHHHHHHHHHHHHHHHhcCceEEEEcCCceECCCCCCCCC---hhHHHHhcCCCc-cCCCCC--cCeEEHHH
Confidence            666677899999999999999988888999999999999997643211   122344445422 222222  24789999


Q ss_pred             ceeEEEeeccC
Q 025755          235 GVRLYRCKIQI  245 (248)
Q Consensus       235 g~~~~~~~~~~  245 (248)
                      .+.++.++++.
T Consensus       283 va~A~~~al~~  293 (367)
T PLN02686        283 LAEAHVCVYEA  293 (367)
T ss_pred             HHHHHHHHHhc
Confidence            98888777653

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=99.97  E-value=7e-30  Score=215.82  Aligned_cols=210  Identities=20%  Similarity=0.181  Sum_probs=158.8

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCC--CeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEE
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKG--YMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGV   81 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~v   81 (248)
                      +++|+|+||||+|+||++++++|+++|  ++|++++|+... .........  ..++.++.+|++|.+++.++++++|+|
T Consensus         2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~-~~~~~~~~~--~~~~~~v~~Dl~d~~~l~~~~~~iD~V   78 (324)
T TIGR03589         2 FNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELK-QWEMQQKFP--APCLRFFIGDVRDKERLTRALRGVDYV   78 (324)
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhH-HHHHHHHhC--CCcEEEEEccCCCHHHHHHHHhcCCEE
Confidence            578999999999999999999999986  789999887532 111111111  246889999999999999999999999


Q ss_pred             EEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccccch
Q 025755           82 FHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENY  161 (248)
Q Consensus        82 i~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~  161 (248)
                      ||+||..........+..++++|+.|+.++++++.+.+.++||++||.....+                        .++
T Consensus        79 ih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~~~~~iV~~SS~~~~~p------------------------~~~  134 (324)
T TIGR03589        79 VHAAALKQVPAAEYNPFECIRTNINGAQNVIDAAIDNGVKRVVALSTDKAANP------------------------INL  134 (324)
T ss_pred             EECcccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeCCCCCCC------------------------CCH
Confidence            99999754332233446789999999999999999998899999999542211                        234


Q ss_pred             HHHHHHHHHHHHHHHHH---hCCccEEEEccCeeecCCCCCCCCccHHHHHHHHcCC-CCCCCCCchhhhhhhhhcccee
Q 025755          162 YCLAKTIAEIQALEYAK---RGELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKGF-FFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       162 Y~~sK~~~e~l~~~~~~---~~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                      |+.||+++|.++..++.   +.+++++++|||++|||...    ..+.+......+. .+... ++..+...++||+.+.
T Consensus       135 Y~~sK~~~E~l~~~~~~~~~~~gi~~~~lR~g~v~G~~~~----~i~~~~~~~~~~~~~~~i~-~~~~~r~~i~v~D~a~  209 (324)
T TIGR03589       135 YGATKLASDKLFVAANNISGSKGTRFSVVRYGNVVGSRGS----VVPFFKSLKEEGVTELPIT-DPRMTRFWITLEQGVN  209 (324)
T ss_pred             HHHHHHHHHHHHHHHHhhccccCcEEEEEeecceeCCCCC----cHHHHHHHHHhCCCCeeeC-CCCceEeeEEHHHHHH
Confidence            99999999999877543   45799999999999998642    4455555555554 23222 3445567799999888


Q ss_pred             EEEeeccC
Q 025755          238 LYRCKIQI  245 (248)
Q Consensus       238 ~~~~~~~~  245 (248)
                      ++..+++.
T Consensus       210 a~~~al~~  217 (324)
T TIGR03589       210 FVLKSLER  217 (324)
T ss_pred             HHHHHHhh
Confidence            77666543

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PRK08589 short chain dehydrogenase; Validated

Probab=99.97  E-value=1e-29  Score=209.93  Aligned_cols=216  Identities=15%  Similarity=0.151  Sum_probs=154.3

Q ss_pred             CCCCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC----
Q 025755            1 MSGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA----   76 (248)
Q Consensus         1 m~~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~----   76 (248)
                      |..+++|+++||||++|||+++++.|+++|++|++++|+ .. .....+.+.....++.++.+|++|.+++.++++    
T Consensus         1 m~~l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   78 (272)
T PRK08589          1 MKRLENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EA-VSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKE   78 (272)
T ss_pred             CCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HH-HHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHH
Confidence            667889999999999999999999999999999999998 32 333334443334578899999999998887765    


Q ss_pred             ---CCCEEEEccccCCC-CCC----CCccccchhhhHHHHHHHHHHHHhc---CCCEEEEEeccceeccCCCCCCCCccC
Q 025755           77 ---GCTGVFHVACPVPV-GKV----PNPEVQLIDPAVVGTKNVLNSCVKA---KVKRVVVVSSIGAVMLNPNWPKGQVMD  145 (248)
Q Consensus        77 ---~id~vi~~ag~~~~-~~~----~~~~~~~~~~n~~g~~~~~~~~~~~---~~~~iV~vSS~~~~~~~~~~~~~~~~~  145 (248)
                         .+|++|||||.... ...    .+.++..+++|+.++..+++++.+.   +.++||++||..+..+.+....     
T Consensus        79 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~-----  153 (272)
T PRK08589         79 QFGRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQGGSIINTSSFSGQAADLYRSG-----  153 (272)
T ss_pred             HcCCcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEeCchhhcCCCCCCch-----
Confidence               47999999997642 111    2335678899999987777776543   2379999999876665543333     


Q ss_pred             CCCCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCCCccH----HHHHHH-----Hc
Q 025755          146 EECWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTINTSS----LLLLGF-----LK  213 (248)
Q Consensus       146 e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~~~~~----~~~~~~-----~~  213 (248)
                                      |+.||++.+.+++.++.+   .|++|++|+||.+.+++.........    ..+...     ..
T Consensus       154 ----------------Y~asKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (272)
T PRK08589        154 ----------------YNAAKGAVINFTKSIAIEYGRDGIRANAIAPGTIETPLVDKLTGTSEDEAGKTFRENQKWMTPL  217 (272)
T ss_pred             ----------------HHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCchhhhhcccchhhHHHHHhhhhhccCCC
Confidence                            999997666665555543   26999999999999986532111000    001000     00


Q ss_pred             C------------CCCCCCCCchhhhhhhhhccceeEE
Q 025755          214 G------------FFFTTPSHSYMLERTLVLNQGVRLY  239 (248)
Q Consensus       214 ~------------~~l~~~~~~~~~g~~l~vd~g~~~~  239 (248)
                      +            .++.++...+++|+.+.+|||....
T Consensus       218 ~~~~~~~~va~~~~~l~s~~~~~~~G~~i~vdgg~~~~  255 (272)
T PRK08589        218 GRLGKPEEVAKLVVFLASDDSSFITGETIRIDGGVMAY  255 (272)
T ss_pred             CCCcCHHHHHHHHHHHcCchhcCcCCCEEEECCCcccC
Confidence            1            1667777889999999999997643

>PRK08265 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.7e-29  Score=207.38  Aligned_cols=217  Identities=17%  Similarity=0.133  Sum_probs=157.4

Q ss_pred             CCCCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC----
Q 025755            1 MSGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA----   76 (248)
Q Consensus         1 m~~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~----   76 (248)
                      |.++++|+++||||+|+||+++++.|+++|++|++++|+..+. ....+.+   ..++.++.+|++|.++++++++    
T Consensus         1 m~~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~-~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~   76 (261)
T PRK08265          1 MIGLAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNG-AAVAASL---GERARFIATDITDDAAIERAVATVVA   76 (261)
T ss_pred             CCCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHHh---CCeeEEEEecCCCHHHHHHHHHHHHH
Confidence            6778899999999999999999999999999999999986422 1222222   3468899999999998888765    


Q ss_pred             ---CCCEEEEccccCCCC---CCCCccccchhhhHHHHHHHHHHHHh---cCCCEEEEEeccceeccCCCCCCCCccCCC
Q 025755           77 ---GCTGVFHVACPVPVG---KVPNPEVQLIDPAVVGTKNVLNSCVK---AKVKRVVVVSSIGAVMLNPNWPKGQVMDEE  147 (248)
Q Consensus        77 ---~id~vi~~ag~~~~~---~~~~~~~~~~~~n~~g~~~~~~~~~~---~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~  147 (248)
                         .+|++|||||.....   ...+.+...+++|+.++.++++++.+   .+.++||++||..+..+.+....       
T Consensus        77 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~-------  149 (261)
T PRK08265         77 RFGRVDILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSISAKFAQTGRWL-------  149 (261)
T ss_pred             HhCCCCEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCCCCch-------
Confidence               579999999975432   12234567889999999988888765   34579999999887766654333       


Q ss_pred             CCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCCCccHHHHHHHH-----cCC----
Q 025755          148 CWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTINTSSLLLLGFL-----KGF----  215 (248)
Q Consensus       148 ~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~-----~~~----  215 (248)
                                    |+.+|+..+.+.+.++.+   .++++|+|+||.+.+++................     .++    
T Consensus       150 --------------Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~~~t~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p  215 (261)
T PRK08265        150 --------------YPASKAAIRQLTRSMAMDLAPDGIRVNSVSPGWTWSRVMDELSGGDRAKADRVAAPFHLLGRVGDP  215 (261)
T ss_pred             --------------hHHHHHHHHHHHHHHHHHhcccCEEEEEEccCCccChhhhhhcccchhHHHHhhcccCCCCCccCH
Confidence                          999998666666655543   369999999999999864321100000001110     011    


Q ss_pred             --------CCCCCCCchhhhhhhhhccceeEEEee
Q 025755          216 --------FFTTPSHSYMLERTLVLNQGVRLYRCK  242 (248)
Q Consensus       216 --------~l~~~~~~~~~g~~l~vd~g~~~~~~~  242 (248)
                              ++.++...+++|+.+.+|||+......
T Consensus       216 ~dva~~~~~l~s~~~~~~tG~~i~vdgg~~~~~~~  250 (261)
T PRK08265        216 EEVAQVVAFLCSDAASFVTGADYAVDGGYSALGPE  250 (261)
T ss_pred             HHHHHHHHHHcCccccCccCcEEEECCCeeccCCC
Confidence                    677777899999999999998765443

>PRK07985 oxidoreductase; Provisional

Probab=99.97  E-value=1.1e-29  Score=211.84  Aligned_cols=214  Identities=15%  Similarity=0.058  Sum_probs=153.8

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchh-hHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC------
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEK-NAHLKKLEGASENLQLFKTDLLDYEALCAATA------   76 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~------   76 (248)
                      +++|+++||||+||||+++++.|+++|++|++.+|+..... ....+.......++.++.+|++|.+++.++++      
T Consensus        47 ~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~  126 (294)
T PRK07985         47 LKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKAL  126 (294)
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            67799999999999999999999999999999887643222 22222222334568889999999998877654      


Q ss_pred             -CCCEEEEccccCCC-C----CCCCccccchhhhHHHHHHHHHHHHhc--CCCEEEEEeccceeccCCCCCCCCccCCCC
Q 025755           77 -GCTGVFHVACPVPV-G----KVPNPEVQLIDPAVVGTKNVLNSCVKA--KVKRVVVVSSIGAVMLNPNWPKGQVMDEEC  148 (248)
Q Consensus        77 -~id~vi~~ag~~~~-~----~~~~~~~~~~~~n~~g~~~~~~~~~~~--~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~  148 (248)
                       ++|++|||||.... .    ...+++...+++|+.++.++++++.+.  ..++||++||..++.+.+....        
T Consensus       127 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~~~~~~~~~~--------  198 (294)
T PRK07985        127 GGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAYQPSPHLLD--------  198 (294)
T ss_pred             CCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchhccCCCCcch--------
Confidence             57999999996421 1    123456778999999999999998764  3479999999877665544333        


Q ss_pred             CCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCC---CccHHHHHHHHcCC-------
Q 025755          149 WSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTI---NTSSLLLLGFLKGF-------  215 (248)
Q Consensus       149 ~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~---~~~~~~~~~~~~~~-------  215 (248)
                                   |+.||+..+.+++.++.+   .|+|+++|+||+++||+.....   .....+..+...++       
T Consensus       199 -------------Y~asKaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~pedv  265 (294)
T PRK07985        199 -------------YAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAGQPAEL  265 (294)
T ss_pred             -------------hHHHHHHHHHHHHHHHHHHhHhCcEEEEEECCcCccccccccCCCHHHHHHHhccCCCCCCCCHHHH
Confidence                         999998666666555543   3699999999999999743210   01111111111111       


Q ss_pred             -----CCCCCCCchhhhhhhhhccceeE
Q 025755          216 -----FFTTPSHSYMLERTLVLNQGVRL  238 (248)
Q Consensus       216 -----~l~~~~~~~~~g~~l~vd~g~~~  238 (248)
                           ++.++.+.|++|+++.+|||..+
T Consensus       266 a~~~~fL~s~~~~~itG~~i~vdgG~~~  293 (294)
T PRK07985        266 APVYVYLASQESSYVTAEVHGVCGGEHL  293 (294)
T ss_pred             HHHHHhhhChhcCCccccEEeeCCCeeC
Confidence                 77788889999999999999753

>PRK08339 short chain dehydrogenase; Provisional

Probab=99.97  E-value=3.2e-30  Score=211.90  Aligned_cols=212  Identities=13%  Similarity=0.076  Sum_probs=151.6

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcC-CCCCeEEEEccCCCHHHHHHHhC------
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEG-ASENLQLFKTDLLDYEALCAATA------   76 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Di~d~~~~~~~~~------   76 (248)
                      +++|+++||||+++||++++++|+++|++|++++|+..+. ....+.+.. ...++.++.+|++|.++++++++      
T Consensus         6 l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~g   84 (263)
T PRK08339          6 LSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENL-KKAREKIKSESNVDVSYIVADLTKREDLERTVKELKNIG   84 (263)
T ss_pred             CCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhhC
Confidence            6789999999999999999999999999999999986432 222222222 13568899999999999888775      


Q ss_pred             CCCEEEEccccCCCCC----CCCccccchhhhHHHHHHHHHHH----HhcCCCEEEEEeccceeccCCCCCCCCccCCCC
Q 025755           77 GCTGVFHVACPVPVGK----VPNPEVQLIDPAVVGTKNVLNSC----VKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEEC  148 (248)
Q Consensus        77 ~id~vi~~ag~~~~~~----~~~~~~~~~~~n~~g~~~~~~~~----~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~  148 (248)
                      .+|++|||||......    ..+.|+..+++|+.++..+++++    ++.+.++||++||..+..+.+....        
T Consensus        85 ~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~~~~~~~~~--------  156 (263)
T PRK08339         85 EPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIKEPIPNIAL--------  156 (263)
T ss_pred             CCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccccCCCCcchh--------
Confidence            4899999999754322    13456778999988876665555    4446689999999876655544333        


Q ss_pred             CCchhhhccccchHHHHHH----HHHHHHHHHHHhCCccEEEEccCeeecCCCCCC-------C-CccHHHHHHHH----
Q 025755          149 WSDEEFCKATENYYCLAKT----IAEIQALEYAKRGELDIVTVCPSIVIGPMLQPT-------I-NTSSLLLLGFL----  212 (248)
Q Consensus       149 ~~~~~~~~~~~~~Y~~sK~----~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~-------~-~~~~~~~~~~~----  212 (248)
                                   |+.+|+    +++.++.+++++ |||||+|+||.+.+++....       . .........+.    
T Consensus       157 -------------y~asKaal~~l~~~la~el~~~-gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p  222 (263)
T PRK08339        157 -------------SNVVRISMAGLVRTLAKELGPK-GITVNGIMPGIIRTDRVIQLAQDRAKREGKSVEEALQEYAKPIP  222 (263)
T ss_pred             -------------hHHHHHHHHHHHHHHHHHhccc-CeEEEEEEeCcCccHHHHHHHHhhhhccCCCHHHHHHHHhccCC
Confidence                         999996    555556666554 59999999999999863210       0 00011111111    


Q ss_pred             cCC------------CCCCCCCchhhhhhhhhccceeE
Q 025755          213 KGF------------FFTTPSHSYMLERTLVLNQGVRL  238 (248)
Q Consensus       213 ~~~------------~l~~~~~~~~~g~~l~vd~g~~~  238 (248)
                      .++            |+.++...|++|+++.+|||+..
T Consensus       223 ~~r~~~p~dva~~v~fL~s~~~~~itG~~~~vdgG~~~  260 (263)
T PRK08339        223 LGRLGEPEEIGYLVAFLASDLGSYINGAMIPVDGGRLN  260 (263)
T ss_pred             cccCcCHHHHHHHHHHHhcchhcCccCceEEECCCccc
Confidence            111            67788889999999999999753

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=99.97  E-value=2.2e-30  Score=209.14  Aligned_cols=222  Identities=27%  Similarity=0.303  Sum_probs=178.6

Q ss_pred             EEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCC--CEEEEccc
Q 025755            9 VCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGC--TGVFHVAC   86 (248)
Q Consensus         9 vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~i--d~vi~~ag   86 (248)
                      ||||||+|+||++++++|+++|++|+.+.|+..+.......      .++.++.+|+.|.+.++++++..  |.|||+|+
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~------~~~~~~~~dl~~~~~~~~~~~~~~~d~vi~~a~   74 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKK------LNVEFVIGDLTDKEQLEKLLEKANIDVVIHLAA   74 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHH------TTEEEEESETTSHHHHHHHHHHHTESEEEEEBS
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCcccccccccccccccccc------ceEEEEEeeccccccccccccccCceEEEEeec
Confidence            79999999999999999999999999988887533222111      27899999999999999999865  99999999


Q ss_pred             cCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccccchHHHHH
Q 025755           87 PVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAK  166 (248)
Q Consensus        87 ~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK  166 (248)
                      .............+++.|+.++.++++++++.+.+++|++||. ..|+...   ..+++|+++..+      .++|+.+|
T Consensus        75 ~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~sS~-~~y~~~~---~~~~~e~~~~~~------~~~Y~~~K  144 (236)
T PF01370_consen   75 FSSNPESFEDPEEIIEANVQGTRNLLEAAREAGVKRFIFLSSA-SVYGDPD---GEPIDEDSPINP------LSPYGASK  144 (236)
T ss_dssp             SSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEEG-GGGTSSS---SSSBETTSGCCH------SSHHHHHH
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccc-ccccccc---cccccccccccc------cccccccc
Confidence            7532111234477899999999999999999998999999995 4666542   556777776644      45599999


Q ss_pred             HHHHHHHHHHHHhCCccEEEEccCeeecCCC--CCCCCccHHHHHHHHcCCCCCCCCCchhhhhhhhhccceeEEEeecc
Q 025755          167 TIAEIQALEYAKRGELDIVTVCPSIVIGPML--QPTINTSSLLLLGFLKGFFFTTPSHSYMLERTLVLNQGVRLYRCKIQ  244 (248)
Q Consensus       167 ~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~l~vd~g~~~~~~~~~  244 (248)
                      ..+|.++..+.++++++++++||+.+|||..  .........++.++..++.+..+.++....+.++++|...++..+++
T Consensus       145 ~~~e~~~~~~~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~  224 (236)
T PF01370_consen  145 RAAEELLRDYAKKYGLRVTILRPPNVYGPGNPNNNSSSFLPSLIRQALKGKPIKIPGDGSQVRDFIHVDDLAEAIVAALE  224 (236)
T ss_dssp             HHHHHHHHHHHHHHTSEEEEEEESEEESTTSSSSSTSSHHHHHHHHHHTTSSEEEESTSSCEEEEEEHHHHHHHHHHHHH
T ss_pred             ccccccccccccccccccccccccccccccccccccccccchhhHHhhcCCcccccCCCCCccceEEHHHHHHHHHHHHh
Confidence            9999999999988789999999999999991  11235667888999999876666666668889999999888877776


Q ss_pred             CC
Q 025755          245 IP  246 (248)
Q Consensus       245 ~p  246 (248)
                      .|
T Consensus       225 ~~  226 (236)
T PF01370_consen  225 NP  226 (236)
T ss_dssp             HS
T ss_pred             CC
Confidence            54

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>PRK12747 short chain dehydrogenase; Provisional

Probab=99.97  E-value=2.8e-29  Score=204.95  Aligned_cols=213  Identities=13%  Similarity=0.134  Sum_probs=149.9

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-------
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-------   76 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-------   76 (248)
                      +++|+++||||+||||++++++|+++|++|++..++..+........+.....++..+.+|++|.+++..+++       
T Consensus         2 ~~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (252)
T PRK12747          2 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQ   81 (252)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhh
Confidence            5689999999999999999999999999999876443222233333333334567788999999877665432       


Q ss_pred             ------CCCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHHhc--CCCEEEEEeccceeccCCCCCCCCcc
Q 025755           77 ------GCTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCVKA--KVKRVVVVSSIGAVMLNPNWPKGQVM  144 (248)
Q Consensus        77 ------~id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~~~--~~~~iV~vSS~~~~~~~~~~~~~~~~  144 (248)
                            ++|+||||||.......    .+.|+.++++|+.++..+++++.+.  +.++||++||..+..+.+....    
T Consensus        82 ~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~----  157 (252)
T PRK12747         82 NRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISLPDFIA----  157 (252)
T ss_pred             hhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCcccccCCCCchh----
Confidence                  58999999997543322    2235678899999999999888764  3479999999876655443323    


Q ss_pred             CCCCCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCCC--ccHHHHHHH-HcCC---
Q 025755          145 DEECWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTIN--TSSLLLLGF-LKGF---  215 (248)
Q Consensus       145 ~e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~~--~~~~~~~~~-~~~~---  215 (248)
                                       |+.||++.+.+.+.++.+   .++|+|+|+||.+.+|+......  ....+.... ..++   
T Consensus       158 -----------------Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (252)
T PRK12747        158 -----------------YSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAELLSDPMMKQYATTISAFNRLGE  220 (252)
T ss_pred             -----------------HHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCchhhhcccCHHHHHHHHhcCcccCCCC
Confidence                             999998666665555543   26999999999999997532110  001111110 0011   


Q ss_pred             ---------CCCCCCCchhhhhhhhhcccee
Q 025755          216 ---------FFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       216 ---------~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                               ++.++...|++|+.+.+|||..
T Consensus       221 ~~dva~~~~~l~s~~~~~~~G~~i~vdgg~~  251 (252)
T PRK12747        221 VEDIADTAAFLASPDSRWVTGQLIDVSGGSC  251 (252)
T ss_pred             HHHHHHHHHHHcCccccCcCCcEEEecCCcc
Confidence                     6777778899999999999964

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=99.97  E-value=1.9e-29  Score=206.82  Aligned_cols=217  Identities=12%  Similarity=0.062  Sum_probs=153.8

Q ss_pred             CCCCCCcEEEEEcCc--cHHHHHHHHHHHHCCCeEEEEEcCCCch-hhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-
Q 025755            1 MSGEDKERVCVTGAG--GYIASWLVKYLLLKGYMVHGTVRDPCDE-KNAHLKKLEGASENLQLFKTDLLDYEALCAATA-   76 (248)
Q Consensus         1 m~~l~~k~vlVtG~~--g~iG~~~~~~l~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-   76 (248)
                      |.++++|+++||||+  +|||++++++|+++|++|++.+|+.... .....+++......+.++.+|++|.++++++++ 
T Consensus         1 ~~~l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~   80 (258)
T PRK07370          1 MLDLTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFET   80 (258)
T ss_pred             CcccCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHH
Confidence            667889999999986  8999999999999999999887754321 223333333333456788999999999888775 


Q ss_pred             ------CCCEEEEccccCCC----CC----CCCccccchhhhHHHHHHHHHHHHhc--CCCEEEEEeccceeccCCCCCC
Q 025755           77 ------GCTGVFHVACPVPV----GK----VPNPEVQLIDPAVVGTKNVLNSCVKA--KVKRVVVVSSIGAVMLNPNWPK  140 (248)
Q Consensus        77 ------~id~vi~~ag~~~~----~~----~~~~~~~~~~~n~~g~~~~~~~~~~~--~~~~iV~vSS~~~~~~~~~~~~  140 (248)
                            ++|++|||||....    ..    ..+.|+..+++|+.++..+++++.+.  ..++||++||..+..+.+.+..
T Consensus        81 ~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~~~~~  160 (258)
T PRK07370         81 IKQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLGGVRAIPNYNV  160 (258)
T ss_pred             HHHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEeccccccCCcccch
Confidence                  58999999997532    11    12456788999999998888887654  3379999999776555444333


Q ss_pred             CCccCCCCCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCCCccHHHHHHH----Hc
Q 025755          141 GQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTINTSSLLLLGF----LK  213 (248)
Q Consensus       141 ~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~----~~  213 (248)
                                           |+.||++.+.+.+.++.+   .||+||+|+||.+.+++...... .+......    ..
T Consensus       161 ---------------------Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~~~~~~~-~~~~~~~~~~~~p~  218 (258)
T PRK07370        161 ---------------------MGVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTLASSAVGG-ILDMIHHVEEKAPL  218 (258)
T ss_pred             ---------------------hhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCchhhcccc-chhhhhhhhhcCCc
Confidence                                 999997555555544433   35999999999999986421100 01111111    00


Q ss_pred             CC------------CCCCCCCchhhhhhhhhccceeEE
Q 025755          214 GF------------FFTTPSHSYMLERTLVLNQGVRLY  239 (248)
Q Consensus       214 ~~------------~l~~~~~~~~~g~~l~vd~g~~~~  239 (248)
                      ++            |+.++...+++|+++.+|||+.+.
T Consensus       219 ~r~~~~~dva~~~~fl~s~~~~~~tG~~i~vdgg~~~~  256 (258)
T PRK07370        219 RRTVTQTEVGNTAAFLLSDLASGITGQTIYVDAGYCIM  256 (258)
T ss_pred             CcCCCHHHHHHHHHHHhChhhccccCcEEEECCccccc
Confidence            11            788888999999999999998753

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=99.97  E-value=3.6e-29  Score=207.20  Aligned_cols=214  Identities=18%  Similarity=0.157  Sum_probs=154.3

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-------
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-------   76 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-------   76 (248)
                      +++|+++||||+|+||+++++.|+++|++|++++|+... .....+.+.....++.++++|+.|.+++..+++       
T Consensus         8 ~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   86 (278)
T PRK08277          8 LKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEK-AEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFG   86 (278)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            578999999999999999999999999999999997632 223333333334568899999999998887764       


Q ss_pred             CCCEEEEccccCCCCCC-------------------CCccccchhhhHHHHHHHHHHH----HhcCCCEEEEEeccceec
Q 025755           77 GCTGVFHVACPVPVGKV-------------------PNPEVQLIDPAVVGTKNVLNSC----VKAKVKRVVVVSSIGAVM  133 (248)
Q Consensus        77 ~id~vi~~ag~~~~~~~-------------------~~~~~~~~~~n~~g~~~~~~~~----~~~~~~~iV~vSS~~~~~  133 (248)
                      ++|+||||||.......                   .+.+...+++|+.++..+++++    .+.+.++||++||..++.
T Consensus        87 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~  166 (278)
T PRK08277         87 PCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMNAFT  166 (278)
T ss_pred             CCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhcC
Confidence            68999999996432211                   2335677899999987666555    444568999999987766


Q ss_pred             cCCCCCCCCccCCCCCCchhhhccccchHHHHHHHHHHHHHHHHHhC---CccEEEEccCeeecCCCCCC----CCccHH
Q 025755          134 LNPNWPKGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKRG---ELDIVTVCPSIVIGPMLQPT----INTSSL  206 (248)
Q Consensus       134 ~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~---~i~v~~vrpg~i~g~~~~~~----~~~~~~  206 (248)
                      +.+....                     |+.||++.+.+++.++.++   ++++++|+||.+.+++....    ......
T Consensus       167 ~~~~~~~---------------------Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~  225 (278)
T PRK08277        167 PLTKVPA---------------------YSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQNRALLFNEDGSLTE  225 (278)
T ss_pred             CCCCCch---------------------hHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcchhhhhccccccchh
Confidence            5543333                     9999987777666666543   69999999999999964321    000011


Q ss_pred             HHHHH----HcCC------------CCCCC-CCchhhhhhhhhccceeEE
Q 025755          207 LLLGF----LKGF------------FFTTP-SHSYMLERTLVLNQGVRLY  239 (248)
Q Consensus       207 ~~~~~----~~~~------------~l~~~-~~~~~~g~~l~vd~g~~~~  239 (248)
                      .....    ..++            |+.++ .+.+++|++|.+|||.+++
T Consensus       226 ~~~~~~~~~p~~r~~~~~dva~~~~~l~s~~~~~~~tG~~i~vdgG~~~~  275 (278)
T PRK08277        226 RANKILAHTPMGRFGKPEELLGTLLWLADEKASSFVTGVVLPVDGGFSAY  275 (278)
T ss_pred             HHHHHhccCCccCCCCHHHHHHHHHHHcCccccCCcCCCEEEECCCeecc
Confidence            11111    1111            77788 7899999999999998765

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=99.97  E-value=3.5e-29  Score=204.65  Aligned_cols=213  Identities=10%  Similarity=0.078  Sum_probs=155.7

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC------
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA------   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~------   76 (248)
                      ++++|+++||||+|+||++++++|+++|++|++++|+... ......++.....++.++.+|++|.++++++++      
T Consensus         6 ~l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~-~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   84 (254)
T PRK08085          6 SLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAER-AELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDI   84 (254)
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHH-HHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhc
Confidence            3678999999999999999999999999999999998642 223333333334567888999999999888764      


Q ss_pred             -CCCEEEEccccCCCCC----CCCccccchhhhHHHHHHHHHHHHh----cCCCEEEEEeccceeccCCCCCCCCccCCC
Q 025755           77 -GCTGVFHVACPVPVGK----VPNPEVQLIDPAVVGTKNVLNSCVK----AKVKRVVVVSSIGAVMLNPNWPKGQVMDEE  147 (248)
Q Consensus        77 -~id~vi~~ag~~~~~~----~~~~~~~~~~~n~~g~~~~~~~~~~----~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~  147 (248)
                       .+|+||||||......    ..++|...+++|+.++.++++++.+    .+.++||++||..+..+.+....       
T Consensus        85 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~-------  157 (254)
T PRK08085         85 GPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSELGRDTITP-------  157 (254)
T ss_pred             CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhccCCCCCcc-------
Confidence             4799999999754321    1244567899999999888887765    35579999999776555443333       


Q ss_pred             CCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCCCccHHHHHHHHc----C------
Q 025755          148 CWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLK----G------  214 (248)
Q Consensus       148 ~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~----~------  214 (248)
                                    |+.+|++.+.+++.++.+   .|+++|+|+||++.+++...... ...+......    +      
T Consensus       158 --------------Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~~~~-~~~~~~~~~~~~p~~~~~~~~  222 (254)
T PRK08085        158 --------------YAASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALVE-DEAFTAWLCKRTPAARWGDPQ  222 (254)
T ss_pred             --------------hHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcchhhhcc-CHHHHHHHHhcCCCCCCcCHH
Confidence                          999998766666666543   26999999999999997543211 0111111111    1      


Q ss_pred             ------CCCCCCCCchhhhhhhhhccceeE
Q 025755          215 ------FFFTTPSHSYMLERTLVLNQGVRL  238 (248)
Q Consensus       215 ------~~l~~~~~~~~~g~~l~vd~g~~~  238 (248)
                            .++.++.+.|++|+++.+|||..+
T Consensus       223 ~va~~~~~l~~~~~~~i~G~~i~~dgg~~~  252 (254)
T PRK08085        223 ELIGAAVFLSSKASDFVNGHLLFVDGGMLV  252 (254)
T ss_pred             HHHHHHHHHhCccccCCcCCEEEECCCeee
Confidence                  177778889999999999999764

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.97  E-value=4.7e-29  Score=203.74  Aligned_cols=208  Identities=18%  Similarity=0.163  Sum_probs=150.8

Q ss_pred             CCCcEEEEEcCc--cHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-----
Q 025755            4 EDKERVCVTGAG--GYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-----   76 (248)
Q Consensus         4 l~~k~vlVtG~~--g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-----   76 (248)
                      +++|+++||||+  +|||++++++|+++|++|++.+|+. + .....+++.  ..++.++++|++|.++++++++     
T Consensus         5 l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~-~-~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~   80 (252)
T PRK06079          5 LSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQND-R-MKKSLQKLV--DEEDLLVECDVASDESIERAFATIKER   80 (252)
T ss_pred             cCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCch-H-HHHHHHhhc--cCceeEEeCCCCCHHHHHHHHHHHHHH
Confidence            678999999999  8999999999999999999999873 2 222223322  2467889999999998887764     


Q ss_pred             --CCCEEEEccccCCC----C----CCCCccccchhhhHHHHHHHHHHHHhc--CCCEEEEEeccceeccCCCCCCCCcc
Q 025755           77 --GCTGVFHVACPVPV----G----KVPNPEVQLIDPAVVGTKNVLNSCVKA--KVKRVVVVSSIGAVMLNPNWPKGQVM  144 (248)
Q Consensus        77 --~id~vi~~ag~~~~----~----~~~~~~~~~~~~n~~g~~~~~~~~~~~--~~~~iV~vSS~~~~~~~~~~~~~~~~  144 (248)
                        ++|++|||||....    .    ...+.|+..+++|+.++..+++++.+.  +.++||++||..+..+.+.+..    
T Consensus        81 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~~~~~~~----  156 (252)
T PRK06079         81 VGKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFGSERAIPNYNV----  156 (252)
T ss_pred             hCCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccCccccCCcchh----
Confidence              48999999997542    1    112345678999999999888888764  3479999999776555444333    


Q ss_pred             CCCCCCchhhhccccchHHHHHHH----HHHHHHHHHHhCCccEEEEccCeeecCCCCCCCCccHHHHHHH----HcCC-
Q 025755          145 DEECWSDEEFCKATENYYCLAKTI----AEIQALEYAKRGELDIVTVCPSIVIGPMLQPTINTSSLLLLGF----LKGF-  215 (248)
Q Consensus       145 ~e~~~~~~~~~~~~~~~Y~~sK~~----~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~----~~~~-  215 (248)
                                       |+.||+.    ++.++.+++++ ||+||+|+||.+.+++...... .....+..    ..++ 
T Consensus       157 -----------------Y~asKaal~~l~~~la~el~~~-gI~vn~i~PG~v~T~~~~~~~~-~~~~~~~~~~~~p~~r~  217 (252)
T PRK06079        157 -----------------MGIAKAALESSVRYLARDLGKK-GIRVNAISAGAVKTLAVTGIKG-HKDLLKESDSRTVDGVG  217 (252)
T ss_pred             -----------------hHHHHHHHHHHHHHHHHHhhhc-CcEEEEEecCcccccccccCCC-hHHHHHHHHhcCcccCC
Confidence                             9999974    45555555544 5999999999999986432111 11111111    1121 


Q ss_pred             -----------CCCCCCCchhhhhhhhhccceeE
Q 025755          216 -----------FFTTPSHSYMLERTLVLNQGVRL  238 (248)
Q Consensus       216 -----------~l~~~~~~~~~g~~l~vd~g~~~  238 (248)
                                 |+.++...|++|+++.+|||...
T Consensus       218 ~~pedva~~~~~l~s~~~~~itG~~i~vdgg~~~  251 (252)
T PRK06079        218 VTIEEVGNTAAFLLSDLSTGVTGDIIYVDKGVHL  251 (252)
T ss_pred             CCHHHHHHHHHHHhCcccccccccEEEeCCceec
Confidence                       77788889999999999999754

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.97  E-value=4.6e-29  Score=204.81  Aligned_cols=215  Identities=14%  Similarity=0.089  Sum_probs=151.4

Q ss_pred             CCCCCCcEEEEEcCcc--HHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC--
Q 025755            1 MSGEDKERVCVTGAGG--YIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA--   76 (248)
Q Consensus         1 m~~l~~k~vlVtG~~g--~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~--   76 (248)
                      |..+++|+++||||++  |||+++++.|+++|++|++.+|+..  .....+.+....+....+.+|++|.++++++++  
T Consensus         1 ~~~l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~~--~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   78 (262)
T PRK07984          1 MGFLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDK--LKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAEL   78 (262)
T ss_pred             CcccCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecchh--HHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHH
Confidence            6678899999999985  9999999999999999999888731  222233333333456788999999999888774  


Q ss_pred             -----CCCEEEEccccCCCCC---------CCCccccchhhhHHHHHHHHHHHHhc--CCCEEEEEeccceeccCCCCCC
Q 025755           77 -----GCTGVFHVACPVPVGK---------VPNPEVQLIDPAVVGTKNVLNSCVKA--KVKRVVVVSSIGAVMLNPNWPK  140 (248)
Q Consensus        77 -----~id~vi~~ag~~~~~~---------~~~~~~~~~~~n~~g~~~~~~~~~~~--~~~~iV~vSS~~~~~~~~~~~~  140 (248)
                           ++|++|||||......         ..+.|...+++|+.+...+.+++.+.  +.++||++||..+..+.+++..
T Consensus        79 ~~~~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~iss~~~~~~~~~~~~  158 (262)
T PRK07984         79 GKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNV  158 (262)
T ss_pred             HhhcCCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcCCcEEEEEecCCCCCCCCCcch
Confidence                 4799999999754311         12234567899999998888887653  3379999999776554444333


Q ss_pred             CCccCCCCCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCCCccHHHHHHH----Hc
Q 025755          141 GQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTINTSSLLLLGF----LK  213 (248)
Q Consensus       141 ~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~----~~  213 (248)
                                           |+.||.+.+.+.+.++.+   .+||||+|+||.+.+++...... ........    ..
T Consensus       159 ---------------------Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~-~~~~~~~~~~~~p~  216 (262)
T PRK07984        159 ---------------------MGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKD-FRKMLAHCEAVTPI  216 (262)
T ss_pred             ---------------------hHHHHHHHHHHHHHHHHHhcccCcEEeeeecCcccchHHhcCCc-hHHHHHHHHHcCCC
Confidence                                 999997555554444432   25999999999999975431111 11111111    11


Q ss_pred             CC------------CCCCCCCchhhhhhhhhccceeEE
Q 025755          214 GF------------FFTTPSHSYMLERTLVLNQGVRLY  239 (248)
Q Consensus       214 ~~------------~l~~~~~~~~~g~~l~vd~g~~~~  239 (248)
                      ++            |+.++...|++|+++.+|||....
T Consensus       217 ~r~~~pedva~~~~~L~s~~~~~itG~~i~vdgg~~~~  254 (262)
T PRK07984        217 RRTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGGFSIA  254 (262)
T ss_pred             cCCCCHHHHHHHHHHHcCcccccccCcEEEECCCcccc
Confidence            11            677788899999999999997643

>PRK06398 aldose dehydrogenase; Validated

Probab=99.97  E-value=3e-29  Score=205.59  Aligned_cols=206  Identities=16%  Similarity=0.156  Sum_probs=154.3

Q ss_pred             CCCCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC----
Q 025755            1 MSGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA----   76 (248)
Q Consensus         1 m~~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~----   76 (248)
                      |+++++|+++||||+|+||+++++.|+++|++|++++|+..+            ..++.++.+|++|+++++++++    
T Consensus         1 ~~~l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~------------~~~~~~~~~D~~~~~~i~~~~~~~~~   68 (258)
T PRK06398          1 DLGLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPS------------YNDVDYFKVDVSNKEQVIKGIDYVIS   68 (258)
T ss_pred             CCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCccc------------cCceEEEEccCCCHHHHHHHHHHHHH
Confidence            677899999999999999999999999999999999987632            1257889999999998888765    


Q ss_pred             ---CCCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHHh----cCCCEEEEEeccceeccCCCCCCCCccC
Q 025755           77 ---GCTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCVK----AKVKRVVVVSSIGAVMLNPNWPKGQVMD  145 (248)
Q Consensus        77 ---~id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~~----~~~~~iV~vSS~~~~~~~~~~~~~~~~~  145 (248)
                         .+|+||||||.......    .++|+..+++|+.++.++++++.+    .+.++||++||..+..+.+....     
T Consensus        69 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~-----  143 (258)
T PRK06398         69 KYGRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFAVTRNAAA-----  143 (258)
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhccCCCCCch-----
Confidence               58999999997543322    234567789999999888877754    35689999999876655443333     


Q ss_pred             CCCCCchhhhccccchHHHHHHHHHHHHHHHHHhC--CccEEEEccCeeecCCCCCCC--------CccHHHHHHH----
Q 025755          146 EECWSDEEFCKATENYYCLAKTIAEIQALEYAKRG--ELDIVTVCPSIVIGPMLQPTI--------NTSSLLLLGF----  211 (248)
Q Consensus       146 e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~--~i~v~~vrpg~i~g~~~~~~~--------~~~~~~~~~~----  211 (248)
                                      |+.||++.+.+.+.++.+.  +++||+|+||.+.+++.....        .........+    
T Consensus       144 ----------------Y~~sKaal~~~~~~la~e~~~~i~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  207 (258)
T PRK06398        144 ----------------YVTSKHAVLGLTRSIAVDYAPTIRCVAVCPGSIRTPLLEWAAELEVGKDPEHVERKIREWGEMH  207 (258)
T ss_pred             ----------------hhhhHHHHHHHHHHHHHHhCCCCEEEEEecCCccchHHhhhhhccccCChhhhHHHHHhhhhcC
Confidence                            9999987777777776543  499999999999998643210        0000001000    


Q ss_pred             HcCC------------CCCCCCCchhhhhhhhhccceeEE
Q 025755          212 LKGF------------FFTTPSHSYMLERTLVLNQGVRLY  239 (248)
Q Consensus       212 ~~~~------------~l~~~~~~~~~g~~l~vd~g~~~~  239 (248)
                      ..++            ++.++...+++|+++.+|||....
T Consensus       208 ~~~~~~~p~eva~~~~~l~s~~~~~~~G~~i~~dgg~~~~  247 (258)
T PRK06398        208 PMKRVGKPEEVAYVVAFLASDLASFITGECVTVDGGLRAL  247 (258)
T ss_pred             CcCCCcCHHHHHHHHHHHcCcccCCCCCcEEEECCccccC
Confidence            0111            677777899999999999998754

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=99.97  E-value=2.1e-29  Score=214.47  Aligned_cols=232  Identities=16%  Similarity=0.088  Sum_probs=171.6

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhc----CCCCCeEEEEccCCCHHHHHHHhCC-
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLE----GASENLQLFKTDLLDYEALCAATAG-   77 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~~~Di~d~~~~~~~~~~-   77 (248)
                      +.++|+||||||+||||++++++|+++|++|++++|+.........+.+.    ....++.++.+|++|.+++..++++ 
T Consensus         3 ~~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   82 (340)
T PLN02653          3 DPPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDI   82 (340)
T ss_pred             CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHc
Confidence            35789999999999999999999999999999999865321111111111    1134688999999999999998874 


Q ss_pred             -CCEEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCC-----EEEEEeccceeccCCCCCCCCccCCCCCCc
Q 025755           78 -CTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVK-----RVVVVSSIGAVMLNPNWPKGQVMDEECWSD  151 (248)
Q Consensus        78 -id~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~-----~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~  151 (248)
                       +|+|||+|+..........+...+++|+.|+.++++++++.+.+     ++|++||.. +|+..    ..+++|+.+..
T Consensus        83 ~~d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~-vyg~~----~~~~~E~~~~~  157 (340)
T PLN02653         83 KPDEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSE-MYGST----PPPQSETTPFH  157 (340)
T ss_pred             CCCEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHH-HhCCC----CCCCCCCCCCC
Confidence             69999999986544333444667899999999999999988764     899999865 56553    22667776654


Q ss_pred             hhhhccccchHHHHHHHHHHHHHHHHHhCCccEEEEccCeeecCCCCCC--CCccHHHHHHHHcCCCCCC-CCCchhhhh
Q 025755          152 EEFCKATENYYCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPT--INTSSLLLLGFLKGFFFTT-PSHSYMLER  228 (248)
Q Consensus       152 ~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~--~~~~~~~~~~~~~~~~l~~-~~~~~~~g~  228 (248)
                      +      .+.|+.||.++|.+++.++.++++++...++.++|||.....  ......++.++..+..+.. .+++....+
T Consensus       158 p------~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd  231 (340)
T PLN02653        158 P------RSPYAVAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIKVGLQKKLFLGNLDASRD  231 (340)
T ss_pred             C------CChhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCCcccchhHHHHHHHHHHcCCCCceEeCCCcceec
Confidence            4      456999999999999999988889888999999999865432  1122233445556654332 355556678


Q ss_pred             hhhhccceeEEEeeccC
Q 025755          229 TLVLNQGVRLYRCKIQI  245 (248)
Q Consensus       229 ~l~vd~g~~~~~~~~~~  245 (248)
                      .+||+|...++..+++.
T Consensus       232 ~i~v~D~a~a~~~~~~~  248 (340)
T PLN02653        232 WGFAGDYVEAMWLMLQQ  248 (340)
T ss_pred             ceeHHHHHHHHHHHHhc
Confidence            89999998887776653

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=99.97  E-value=5.9e-29  Score=203.41  Aligned_cols=213  Identities=17%  Similarity=0.175  Sum_probs=156.2

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC------
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA------   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~------   76 (248)
                      .+++|+++||||+|+||++++++|+++|++|++++|+..+ .....+.+.....++.++.+|++|.++++++++      
T Consensus         7 ~~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   85 (255)
T PRK07523          7 DLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAK-LAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEI   85 (255)
T ss_pred             CCCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHH-HHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhc
Confidence            4678999999999999999999999999999999998642 223333333334568899999999999888875      


Q ss_pred             -CCCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHHhc----CCCEEEEEeccceeccCCCCCCCCccCCC
Q 025755           77 -GCTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCVKA----KVKRVVVVSSIGAVMLNPNWPKGQVMDEE  147 (248)
Q Consensus        77 -~id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~~~----~~~~iV~vSS~~~~~~~~~~~~~~~~~e~  147 (248)
                       .+|+||||||.......    .+.+...+++|+.++.++++++.+.    +.++||++||.....+.+.+..       
T Consensus        86 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~-------  158 (255)
T PRK07523         86 GPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSALARPGIAP-------  158 (255)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhccCCCCCcc-------
Confidence             47999999997654322    2334667889999999999888754    5689999999765554443333       


Q ss_pred             CCCchhhhccccchHHHHHHHHHHHHHHHHH---hCCccEEEEccCeeecCCCCCCCCccHHHHHHHHc----CC-----
Q 025755          148 CWSDEEFCKATENYYCLAKTIAEIQALEYAK---RGELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLK----GF-----  215 (248)
Q Consensus       148 ~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~---~~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~----~~-----  215 (248)
                                    |+.+|...+.+++.++.   ++|++|++++||.+.++....... .......+..    ++     
T Consensus       159 --------------y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  223 (255)
T PRK07523        159 --------------YTATKGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAALVA-DPEFSAWLEKRTPAGRWGKVE  223 (255)
T ss_pred             --------------HHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcccCchhhhhcc-CHHHHHHHHhcCCCCCCcCHH
Confidence                          99999877777666664   236999999999999997542211 1111111110    11     


Q ss_pred             -------CCCCCCCchhhhhhhhhccceeE
Q 025755          216 -------FFTTPSHSYMLERTLVLNQGVRL  238 (248)
Q Consensus       216 -------~l~~~~~~~~~g~~l~vd~g~~~  238 (248)
                             ++..+.+.+++|+++.+|||...
T Consensus       224 dva~~~~~l~~~~~~~~~G~~i~~~gg~~~  253 (255)
T PRK07523        224 ELVGACVFLASDASSFVNGHVLYVDGGITA  253 (255)
T ss_pred             HHHHHHHHHcCchhcCccCcEEEECCCeec
Confidence                   66677789999999999999753

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=99.97  E-value=2e-29  Score=219.91  Aligned_cols=227  Identities=20%  Similarity=0.233  Sum_probs=169.7

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEEc
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFHV   84 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~~   84 (248)
                      +.|+|+||||+||||+++++.|+++|++|++++|...... ........ ..++.++..|+.+..     +.++|+|||+
T Consensus       119 ~~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~-~~~~~~~~-~~~~~~~~~Di~~~~-----~~~~D~ViHl  191 (436)
T PLN02166        119 KRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRK-ENLVHLFG-NPRFELIRHDVVEPI-----LLEVDQIYHL  191 (436)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccH-hHhhhhcc-CCceEEEECcccccc-----ccCCCEEEEC
Confidence            3478999999999999999999999999999998642111 11111111 246788899997643     4579999999


Q ss_pred             cccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccccchHHH
Q 025755           85 ACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCL  164 (248)
Q Consensus        85 ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~  164 (248)
                      |+.........++.+++++|+.|+.+++++|++.+. ++|++||.. +|+.+.   ..+++|+.+... .+..+.+.|+.
T Consensus       192 Aa~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~g~-r~V~~SS~~-VYg~~~---~~p~~E~~~~~~-~p~~p~s~Yg~  265 (436)
T PLN02166        192 ACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-RFLLTSTSE-VYGDPL---EHPQKETYWGNV-NPIGERSCYDE  265 (436)
T ss_pred             ceeccchhhccCHHHHHHHHHHHHHHHHHHHHHhCC-EEEEECcHH-HhCCCC---CCCCCccccccC-CCCCCCCchHH
Confidence            997654433344578899999999999999999875 899999965 565432   345666643211 12233456999


Q ss_pred             HHHHHHHHHHHHHHhCCccEEEEccCeeecCCCCCC-CCccHHHHHHHHcCCCCCCCCCchhhhhhhhhccceeEEEeec
Q 025755          165 AKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPT-INTSSLLLLGFLKGFFFTTPSHSYMLERTLVLNQGVRLYRCKI  243 (248)
Q Consensus       165 sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~g~~l~vd~g~~~~~~~~  243 (248)
                      +|..+|.++..+++++++++.++||+++|||.+... ......++.++..+..+...+++....+.++|+|...++..++
T Consensus       266 SK~~aE~~~~~y~~~~~l~~~ilR~~~vYGp~~~~~~~~~i~~~i~~~l~~~~i~v~g~g~~~rdfi~V~Dva~ai~~~~  345 (436)
T PLN02166        266 GKRTAETLAMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQTIRKQPMTVYGDGKQTRSFQYVSDLVDGLVALM  345 (436)
T ss_pred             HHHHHHHHHHHHHHHhCCCeEEEEEccccCCCCCCCccchHHHHHHHHhcCCCcEEeCCCCeEEeeEEHHHHHHHHHHHH
Confidence            999999999999988889999999999999986432 2345678888888877665666666678899999988776665


Q ss_pred             c
Q 025755          244 Q  244 (248)
Q Consensus       244 ~  244 (248)
                      +
T Consensus       346 ~  346 (436)
T PLN02166        346 E  346 (436)
T ss_pred             h
Confidence            4

>PRK06172 short chain dehydrogenase; Provisional

Probab=99.96  E-value=3.6e-29  Score=204.42  Aligned_cols=213  Identities=14%  Similarity=0.091  Sum_probs=155.5

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC------
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA------   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~------   76 (248)
                      ++++|+++||||+|+||+++++.|+++|++|++++|+.++. ....+.+.....++.++++|++|.+++..+++      
T Consensus         4 ~l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   82 (253)
T PRK06172          4 TFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGG-EETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAY   82 (253)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHH-HHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHh
Confidence            47889999999999999999999999999999999986432 22233333345678999999999998888765      


Q ss_pred             -CCCEEEEccccCCCCC-----CCCccccchhhhHHHHHHHHHHHH----hcCCCEEEEEeccceeccCCCCCCCCccCC
Q 025755           77 -GCTGVFHVACPVPVGK-----VPNPEVQLIDPAVVGTKNVLNSCV----KAKVKRVVVVSSIGAVMLNPNWPKGQVMDE  146 (248)
Q Consensus        77 -~id~vi~~ag~~~~~~-----~~~~~~~~~~~n~~g~~~~~~~~~----~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e  146 (248)
                       .+|+||||||......     ..+.++..+++|+.++..+++++.    +.+.++||++||..++.+.+.+..      
T Consensus        83 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~------  156 (253)
T PRK06172         83 GRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLGAAPKMSI------  156 (253)
T ss_pred             CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCCCCch------
Confidence             4699999999753321     123456788999999977766554    345679999999877665544333      


Q ss_pred             CCCCchhhhccccchHHHHHHHHHHHHHHHHHhC---CccEEEEccCeeecCCCCCCCCccHHHHHHHHc----C-----
Q 025755          147 ECWSDEEFCKATENYYCLAKTIAEIQALEYAKRG---ELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLK----G-----  214 (248)
Q Consensus       147 ~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~---~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~----~-----  214 (248)
                                     |+.+|++.+.+++.++.++   ++++++|+||.+.+++........+.....+..    +     
T Consensus       157 ---------------Y~~sKaa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p  221 (253)
T PRK06172        157 ---------------YAASKHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRAYEADPRKAEFAAAMHPVGRIGKV  221 (253)
T ss_pred             ---------------hHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhcccChHHHHHHhccCCCCCccCH
Confidence                           9999987777766666543   699999999999998754321111111111100    1     


Q ss_pred             -------CCCCCCCCchhhhhhhhhcccee
Q 025755          215 -------FFFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       215 -------~~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                             .++..+...|++|+++.+|||..
T Consensus       222 ~~ia~~~~~l~~~~~~~~~G~~i~~dgg~~  251 (253)
T PRK06172        222 EEVASAVLYLCSDGASFTTGHALMVDGGAT  251 (253)
T ss_pred             HHHHHHHHHHhCccccCcCCcEEEECCCcc
Confidence                   16777778999999999999974

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.96  E-value=2.6e-29  Score=207.36  Aligned_cols=210  Identities=12%  Similarity=0.062  Sum_probs=149.2

Q ss_pred             CCCcEEEEEcCcc--HHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-----
Q 025755            4 EDKERVCVTGAGG--YIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-----   76 (248)
Q Consensus         4 l~~k~vlVtG~~g--~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-----   76 (248)
                      |++|++|||||++  |||+++++.|+++|++|++.+|+...  ....+.+....+...++++|++|.++++++++     
T Consensus         5 l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~--~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~   82 (271)
T PRK06505          5 MQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEAL--GKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKK   82 (271)
T ss_pred             cCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHH--HHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHH
Confidence            6789999999997  99999999999999999999886421  11122221111223578999999999888765     


Q ss_pred             --CCCEEEEccccCCCC--------CCCCccccchhhhHHHHHHHHHHHHhc--CCCEEEEEeccceeccCCCCCCCCcc
Q 025755           77 --GCTGVFHVACPVPVG--------KVPNPEVQLIDPAVVGTKNVLNSCVKA--KVKRVVVVSSIGAVMLNPNWPKGQVM  144 (248)
Q Consensus        77 --~id~vi~~ag~~~~~--------~~~~~~~~~~~~n~~g~~~~~~~~~~~--~~~~iV~vSS~~~~~~~~~~~~~~~~  144 (248)
                        .+|++|||||.....        ...+.|...+++|+.++.++++++.+.  +.++||++||..+..+.+.+..    
T Consensus        83 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~~G~Iv~isS~~~~~~~~~~~~----  158 (271)
T PRK06505         83 WGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPDGGSMLTLTYGGSTRVMPNYNV----  158 (271)
T ss_pred             hCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhccCceEEEEcCCCccccCCccch----
Confidence              589999999975421        113446678899999999888877654  2379999999876655544333    


Q ss_pred             CCCCCCchhhhccccchHHHHHH----HHHHHHHHHHHhCCccEEEEccCeeecCCCCCCCCccHHHHH----HHHcCC-
Q 025755          145 DEECWSDEEFCKATENYYCLAKT----IAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTINTSSLLLL----GFLKGF-  215 (248)
Q Consensus       145 ~e~~~~~~~~~~~~~~~Y~~sK~----~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~----~~~~~~-  215 (248)
                                       |+.||+    +++.++.+++++ |||||+|+||.+.+++...... ......    ....++ 
T Consensus       159 -----------------Y~asKaAl~~l~r~la~el~~~-gIrVn~v~PG~i~T~~~~~~~~-~~~~~~~~~~~~p~~r~  219 (271)
T PRK06505        159 -----------------MGVAKAALEASVRYLAADYGPQ-GIRVNAISAGPVRTLAGAGIGD-ARAIFSYQQRNSPLRRT  219 (271)
T ss_pred             -----------------hhhhHHHHHHHHHHHHHHHhhc-CeEEEEEecCCccccccccCcc-hHHHHHHHhhcCCcccc
Confidence                             999996    555666666554 5999999999999986432111 001111    111111 


Q ss_pred             -----------CCCCCCCchhhhhhhhhccceeE
Q 025755          216 -----------FFTTPSHSYMLERTLVLNQGVRL  238 (248)
Q Consensus       216 -----------~l~~~~~~~~~g~~l~vd~g~~~  238 (248)
                                 |+.++.+.|+||+++.+|||+..
T Consensus       220 ~~peeva~~~~fL~s~~~~~itG~~i~vdgG~~~  253 (271)
T PRK06505        220 VTIDEVGGSALYLLSDLSSGVTGEIHFVDSGYNI  253 (271)
T ss_pred             CCHHHHHHHHHHHhCccccccCceEEeecCCccc
Confidence                       77788889999999999999763

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.96  E-value=3.9e-29  Score=204.82  Aligned_cols=212  Identities=13%  Similarity=0.120  Sum_probs=153.4

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC------
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA------   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~------   76 (248)
                      .+++|+++||||+|+||+++++.|+++|++|++++|+. + .....+.+.....++.++.+|++|.+++.++++      
T Consensus        12 ~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   89 (258)
T PRK06935         12 SLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHGT-N-WDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEF   89 (258)
T ss_pred             cCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCc-H-HHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            36789999999999999999999999999999999873 2 122222222334578899999999999888876      


Q ss_pred             -CCCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHHh----cCCCEEEEEeccceeccCCCCCCCCccCCC
Q 025755           77 -GCTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCVK----AKVKRVVVVSSIGAVMLNPNWPKGQVMDEE  147 (248)
Q Consensus        77 -~id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~~----~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~  147 (248)
                       .+|++|||||.......    .+.++..+++|+.++.++++++.+    .+.++||++||..++.+.+....       
T Consensus        90 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~-------  162 (258)
T PRK06935         90 GKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQGGKFVPA-------  162 (258)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhccCCCCchh-------
Confidence             57999999997543221    234567889999998877766654    45689999999876655543333       


Q ss_pred             CCCchhhhccccchHHHHHHHHHHHHHHHHHhC---CccEEEEccCeeecCCCCCCCC--cc-HHHHHHHHcCC------
Q 025755          148 CWSDEEFCKATENYYCLAKTIAEIQALEYAKRG---ELDIVTVCPSIVIGPMLQPTIN--TS-SLLLLGFLKGF------  215 (248)
Q Consensus       148 ~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~---~i~v~~vrpg~i~g~~~~~~~~--~~-~~~~~~~~~~~------  215 (248)
                                    |+.+|++.+.+++.++.+.   |++|++|+||.+.++.......  .. .....+...++      
T Consensus       163 --------------Y~asK~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  228 (258)
T PRK06935        163 --------------YTASKHGVAGLTKAFANELAAYNIQVNAIAPGYIKTANTAPIRADKNRNDEILKRIPAGRWGEPDD  228 (258)
T ss_pred             --------------hHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeccccccchhhcccChHHHHHHHhcCCCCCCCCHHH
Confidence                          9999987766666665532   6999999999999986432110  00 11111111111      


Q ss_pred             ------CCCCCCCchhhhhhhhhcccee
Q 025755          216 ------FFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       216 ------~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                            |+.++...+++|+++.+|||..
T Consensus       229 va~~~~~l~s~~~~~~~G~~i~~dgg~~  256 (258)
T PRK06935        229 LMGAAVFLASRASDYVNGHILAVDGGWL  256 (258)
T ss_pred             HHHHHHHHcChhhcCCCCCEEEECCCee
Confidence                  6788888999999999999954

>PLN02206 UDP-glucuronate decarboxylase

Probab=99.96  E-value=3.7e-29  Score=218.61  Aligned_cols=227  Identities=20%  Similarity=0.220  Sum_probs=168.2

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEEc
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFHV   84 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~~   84 (248)
                      ++|+||||||+||||+++++.|+++|++|++++|........... .. ...++.++.+|+.+..     +.++|+|||+
T Consensus       118 ~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~~~~-~~-~~~~~~~i~~D~~~~~-----l~~~D~ViHl  190 (442)
T PLN02206        118 KGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVMH-HF-SNPNFELIRHDVVEPI-----LLEVDQIYHL  190 (442)
T ss_pred             CCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhhhhh-hc-cCCceEEEECCccChh-----hcCCCEEEEe
Confidence            568999999999999999999999999999998754321111111 11 1346888899997753     3579999999


Q ss_pred             cccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccccchHHH
Q 025755           85 ACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCL  164 (248)
Q Consensus        85 ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~  164 (248)
                      |+...+.....++.+++++|+.++.+++++|++.+. ++||+||.. +|+...   ..+.+|+.+...+ +..+.+.|+.
T Consensus       191 Aa~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~g~-r~V~~SS~~-VYg~~~---~~p~~E~~~~~~~-P~~~~s~Y~~  264 (442)
T PLN02206        191 ACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSE-VYGDPL---QHPQVETYWGNVN-PIGVRSCYDE  264 (442)
T ss_pred             eeecchhhhhcCHHHHHHHHHHHHHHHHHHHHHhCC-EEEEECChH-HhCCCC---CCCCCccccccCC-CCCccchHHH
Confidence            997654433344578899999999999999999885 999999965 555432   3455665432111 1223456999


Q ss_pred             HHHHHHHHHHHHHHhCCccEEEEccCeeecCCCCCC-CCccHHHHHHHHcCCCCCCCCCchhhhhhhhhccceeEEEeec
Q 025755          165 AKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPT-INTSSLLLLGFLKGFFFTTPSHSYMLERTLVLNQGVRLYRCKI  243 (248)
Q Consensus       165 sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~g~~l~vd~g~~~~~~~~  243 (248)
                      +|..+|.++..+.+++++++.++||+++|||..... ......++.++..++.+....++....+.+||+|...++..++
T Consensus       265 SK~~aE~~~~~y~~~~g~~~~ilR~~~vyGp~~~~~~~~~v~~~i~~~l~~~~i~i~g~G~~~rdfi~V~Dva~ai~~a~  344 (442)
T PLN02206        265 GKRTAETLTMDYHRGANVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLM  344 (442)
T ss_pred             HHHHHHHHHHHHHHHhCCCeEEEEeccccCCCCCccccchHHHHHHHHHcCCCcEEeCCCCEEEeEEeHHHHHHHHHHHH
Confidence            999999999999888889999999999999975432 2345667778877776666666666667899999988776665


Q ss_pred             c
Q 025755          244 Q  244 (248)
Q Consensus       244 ~  244 (248)
                      +
T Consensus       345 e  345 (442)
T PLN02206        345 E  345 (442)
T ss_pred             h
Confidence            4

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=99.96  E-value=7.7e-29  Score=212.95  Aligned_cols=228  Identities=18%  Similarity=0.130  Sum_probs=165.8

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEEc
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFHV   84 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~~   84 (248)
                      ++|+|+||||+|+||+++++.|+++|++|++++|.....    ..   .......++.+|++|.+.+.++++++|+|||+
T Consensus        20 ~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~----~~---~~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~   92 (370)
T PLN02695         20 EKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEH----MS---EDMFCHEFHLVDLRVMENCLKVTKGVDHVFNL   92 (370)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEeccccc----cc---cccccceEEECCCCCHHHHHHHHhCCCEEEEc
Confidence            568999999999999999999999999999999864211    00   00112567889999999999989999999999


Q ss_pred             cccCCCCCC-CCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCC-CCCCccCCCCCCchhhhccccchH
Q 025755           85 ACPVPVGKV-PNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNW-PKGQVMDEECWSDEEFCKATENYY  162 (248)
Q Consensus        85 ag~~~~~~~-~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~Y  162 (248)
                      |+....... .......++.|+.++.++++++++.+++++||+||.. +|+.... ....++.|++.    .+..|.+.|
T Consensus        93 Aa~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~~vk~~V~~SS~~-vYg~~~~~~~~~~~~E~~~----~p~~p~s~Y  167 (370)
T PLN02695         93 AADMGGMGFIQSNHSVIMYNNTMISFNMLEAARINGVKRFFYASSAC-IYPEFKQLETNVSLKESDA----WPAEPQDAY  167 (370)
T ss_pred             ccccCCccccccCchhhHHHHHHHHHHHHHHHHHhCCCEEEEeCchh-hcCCccccCcCCCcCcccC----CCCCCCCHH
Confidence            986542211 1223456789999999999999999999999999965 5554221 01123444431    122345669


Q ss_pred             HHHHHHHHHHHHHHHHhCCccEEEEccCeeecCCCCCCC---CccHHHHHHHHcC-CCCCCCCCchhhhhhhhhccceeE
Q 025755          163 CLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTI---NTSSLLLLGFLKG-FFFTTPSHSYMLERTLVLNQGVRL  238 (248)
Q Consensus       163 ~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~---~~~~~~~~~~~~~-~~l~~~~~~~~~g~~l~vd~g~~~  238 (248)
                      +.+|..+|.++..++.+++++++++||+++|||......   .....++.++... ..+..+.++....+.+|++|...+
T Consensus       168 g~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~r~~i~v~D~a~a  247 (370)
T PLN02695        168 GLEKLATEELCKHYTKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDEFEMWGDGKQTRSFTFIDECVEG  247 (370)
T ss_pred             HHHHHHHHHHHHHHHHHhCCCEEEEEECCccCCCCCccccccccHHHHHHHHHcCCCCeEEeCCCCeEEeEEeHHHHHHH
Confidence            999999999999999888899999999999999754321   1234566666553 344444555555678999998887


Q ss_pred             EEeecc
Q 025755          239 YRCKIQ  244 (248)
Q Consensus       239 ~~~~~~  244 (248)
                      +..+++
T Consensus       248 i~~~~~  253 (370)
T PLN02695        248 VLRLTK  253 (370)
T ss_pred             HHHHHh
Confidence            765554

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=99.96  E-value=1.5e-28  Score=201.97  Aligned_cols=213  Identities=15%  Similarity=0.110  Sum_probs=152.2

Q ss_pred             CCCCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC----
Q 025755            1 MSGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA----   76 (248)
Q Consensus         1 m~~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~----   76 (248)
                      |+.+++|+++||||+||||+++++.|+++|++|++++|+.... ....+.+   ..++.++++|++|.++++++++    
T Consensus         1 ~~~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~-~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~   76 (263)
T PRK06200          1 MGWLHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKL-ASLRQRF---GDHVLVVEGDVTSYADNQRAVDQTVD   76 (263)
T ss_pred             CCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHHh---CCcceEEEccCCCHHHHHHHHHHHHH
Confidence            5668899999999999999999999999999999999976422 2222221   3467889999999998887765    


Q ss_pred             ---CCCEEEEccccCCCC----CCC-C----ccccchhhhHHHHHHHHHHHHhc---CCCEEEEEeccceeccCCCCCCC
Q 025755           77 ---GCTGVFHVACPVPVG----KVP-N----PEVQLIDPAVVGTKNVLNSCVKA---KVKRVVVVSSIGAVMLNPNWPKG  141 (248)
Q Consensus        77 ---~id~vi~~ag~~~~~----~~~-~----~~~~~~~~n~~g~~~~~~~~~~~---~~~~iV~vSS~~~~~~~~~~~~~  141 (248)
                         .+|++|||||+....    ... +    .|..++++|+.++..+++++.+.   ..++||++||..++.+.+...  
T Consensus        77 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~--  154 (263)
T PRK06200         77 AFGKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASGGSMIFTLSNSSFYPGGGGP--  154 (263)
T ss_pred             hcCCCCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcCCEEEEECChhhcCCCCCCc--
Confidence               589999999975421    111 1    15567899999998888888653   336899999987766554322  


Q ss_pred             CccCCCCCCchhhhccccchHHHHHHHHHHHHHHHHHhC--CccEEEEccCeeecCCCCCCC--------CccHHHHHHH
Q 025755          142 QVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKRG--ELDIVTVCPSIVIGPMLQPTI--------NTSSLLLLGF  211 (248)
Q Consensus       142 ~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~--~i~v~~vrpg~i~g~~~~~~~--------~~~~~~~~~~  211 (248)
                                         .|+.||++.+.+++.++.+.  +|+||+|+||.+.+++.....        ...+......
T Consensus       155 -------------------~Y~~sK~a~~~~~~~la~el~~~Irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~  215 (263)
T PRK06200        155 -------------------LYTASKHAVVGLVRQLAYELAPKIRVNGVAPGGTVTDLRGPASLGQGETSISDSPGLADMI  215 (263)
T ss_pred             -------------------hhHHHHHHHHHHHHHHHHHHhcCcEEEEEeCCccccCCcCccccCCCCcccccccchhHHh
Confidence                               29999986666655555432  499999999999998643210        0001111111


Q ss_pred             Hc----CC------------CCCCCC-CchhhhhhhhhccceeE
Q 025755          212 LK----GF------------FFTTPS-HSYMLERTLVLNQGVRL  238 (248)
Q Consensus       212 ~~----~~------------~l~~~~-~~~~~g~~l~vd~g~~~  238 (248)
                      ..    ++            |+.++. +.|++|+++.+|||+.+
T Consensus       216 ~~~~p~~r~~~~~eva~~~~fl~s~~~~~~itG~~i~vdgG~~~  259 (263)
T PRK06200        216 AAITPLQFAPQPEDHTGPYVLLASRRNSRALTGVVINADGGLGI  259 (263)
T ss_pred             hcCCCCCCCCCHHHHhhhhhheecccccCcccceEEEEcCceee
Confidence            10    11            777777 89999999999999753

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=99.96  E-value=7.6e-29  Score=211.92  Aligned_cols=230  Identities=19%  Similarity=0.173  Sum_probs=166.2

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCCCe-EEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC--CCCEEEE
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKGYM-VHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA--GCTGVFH   83 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~--~id~vi~   83 (248)
                      ++|+||||+||||+++++.|+++|++ |+++++............+. ...++.++.+|++|.+++.++++  ++|+|||
T Consensus         1 mkilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih   79 (352)
T PRK10084          1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVS-DSERYVFEHADICDRAELDRIFAQHQPDAVMH   79 (352)
T ss_pred             CeEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHHhcc-cCCceEEEEecCCCHHHHHHHHHhcCCCEEEE
Confidence            37999999999999999999999976 55455432111111111111 13467889999999999999987  4899999


Q ss_pred             ccccCCCCCCCCccccchhhhHHHHHHHHHHHHhc---------CCCEEEEEeccceeccCCCCCC-------CCccCCC
Q 025755           84 VACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKA---------KVKRVVVVSSIGAVMLNPNWPK-------GQVMDEE  147 (248)
Q Consensus        84 ~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~---------~~~~iV~vSS~~~~~~~~~~~~-------~~~~~e~  147 (248)
                      +|+..........+..++++|+.|+.+++++|++.         +.+++|++||.. +|+......       ..+++|+
T Consensus        80 ~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~-vyg~~~~~~~~~~~~~~~~~~E~  158 (352)
T PRK10084         80 LAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDE-VYGDLPHPDEVENSEELPLFTET  158 (352)
T ss_pred             CCcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchh-hcCCCCccccccccccCCCcccc
Confidence            99975433223345778999999999999999874         456999999965 444321100       1124455


Q ss_pred             CCCchhhhccccchHHHHHHHHHHHHHHHHHhCCccEEEEccCeeecCCCCCCCCccHHHHHHHHcCCCCCCCCCchhhh
Q 025755          148 CWSDEEFCKATENYYCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKGFFFTTPSHSYMLE  227 (248)
Q Consensus       148 ~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g  227 (248)
                      .+.      +|.+.|+.||.++|.++..++.+++++++++||+.+|||..... ...+.++.++..+..+....++....
T Consensus       159 ~~~------~p~~~Y~~sK~~~E~~~~~~~~~~g~~~vilr~~~v~Gp~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~  231 (352)
T PRK10084        159 TAY------APSSPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYHFPE-KLIPLVILNALEGKPLPIYGKGDQIR  231 (352)
T ss_pred             CCC------CCCChhHHHHHHHHHHHHHHHHHhCCCEEEEeccceeCCCcCcc-chHHHHHHHHhcCCCeEEeCCCCeEE
Confidence            443      44567999999999999999888889999999999999986432 34566667777776555445555567


Q ss_pred             hhhhhccceeEEEeeccC
Q 025755          228 RTLVLNQGVRLYRCKIQI  245 (248)
Q Consensus       228 ~~l~vd~g~~~~~~~~~~  245 (248)
                      +.+||||.+.++..+++.
T Consensus       232 ~~v~v~D~a~a~~~~l~~  249 (352)
T PRK10084        232 DWLYVEDHARALYKVVTE  249 (352)
T ss_pred             eeEEHHHHHHHHHHHHhc
Confidence            789999998888766653

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.96  E-value=5.9e-29  Score=203.72  Aligned_cols=214  Identities=13%  Similarity=0.049  Sum_probs=149.7

Q ss_pred             CCCCCcEEEEEcCc--cHHHHHHHHHHHHCCCeEEEEEcCCCch--hhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-
Q 025755            2 SGEDKERVCVTGAG--GYIASWLVKYLLLKGYMVHGTVRDPCDE--KNAHLKKLEGASENLQLFKTDLLDYEALCAATA-   76 (248)
Q Consensus         2 ~~l~~k~vlVtG~~--g~iG~~~~~~l~~~g~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-   76 (248)
                      .++++|+++||||+  +|||++++++|+++|++|++.+|+....  .....+.+.  ..++.++++|++|.++++++++ 
T Consensus         3 ~~~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~   80 (257)
T PRK08594          3 LSLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLE--GQESLLLPCDVTSDEEITACFET   80 (257)
T ss_pred             cccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcC--CCceEEEecCCCCHHHHHHHHHH
Confidence            45788999999997  8999999999999999999998764211  111112211  3568889999999999888764 


Q ss_pred             ------CCCEEEEccccCCCC----C----CCCccccchhhhHHHHHHHHHHHHhc--CCCEEEEEeccceeccCCCCCC
Q 025755           77 ------GCTGVFHVACPVPVG----K----VPNPEVQLIDPAVVGTKNVLNSCVKA--KVKRVVVVSSIGAVMLNPNWPK  140 (248)
Q Consensus        77 ------~id~vi~~ag~~~~~----~----~~~~~~~~~~~n~~g~~~~~~~~~~~--~~~~iV~vSS~~~~~~~~~~~~  140 (248)
                            ++|++|||||.....    .    ..+.|...+++|+.+...+++++.+.  ..++||++||..+..+.+....
T Consensus        81 ~~~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~  160 (257)
T PRK08594         81 IKEEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGGERVVQNYNV  160 (257)
T ss_pred             HHHhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCCccCCCCCch
Confidence                  489999999975321    1    12334567899999998888887764  3479999999876655444333


Q ss_pred             CCccCCCCCCchhhhccccchHHHHHHH----HHHHHHHHHHhCCccEEEEccCeeecCCCCCCC---CccHHHHHHHHc
Q 025755          141 GQVMDEECWSDEEFCKATENYYCLAKTI----AEIQALEYAKRGELDIVTVCPSIVIGPMLQPTI---NTSSLLLLGFLK  213 (248)
Q Consensus       141 ~~~~~e~~~~~~~~~~~~~~~Y~~sK~~----~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~---~~~~~~~~~~~~  213 (248)
                                           |+.||+.    ++.++.++.++ |||||+|+||.+.+++.....   ............
T Consensus       161 ---------------------Y~asKaal~~l~~~la~el~~~-gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~  218 (257)
T PRK08594        161 ---------------------MGVAKASLEASVKYLANDLGKD-GIRVNAISAGPIRTLSAKGVGGFNSILKEIEERAPL  218 (257)
T ss_pred             ---------------------hHHHHHHHHHHHHHHHHHhhhc-CCEEeeeecCcccCHhHhhhccccHHHHHHhhcCCc
Confidence                                 9999974    45555555544 599999999999998532110   000000000000


Q ss_pred             C------------CCCCCCCCchhhhhhhhhccceeEE
Q 025755          214 G------------FFFTTPSHSYMLERTLVLNQGVRLY  239 (248)
Q Consensus       214 ~------------~~l~~~~~~~~~g~~l~vd~g~~~~  239 (248)
                      +            .++.++...|++|+.+.+|||+..+
T Consensus       219 ~r~~~p~~va~~~~~l~s~~~~~~tG~~~~~dgg~~~~  256 (257)
T PRK08594        219 RRTTTQEEVGDTAAFLFSDLSRGVTGENIHVDSGYHII  256 (257)
T ss_pred             cccCCHHHHHHHHHHHcCcccccccceEEEECCchhcc
Confidence            1            1777888899999999999997643

>PRK12742 oxidoreductase; Provisional

Probab=99.96  E-value=9.5e-29  Score=199.89  Aligned_cols=211  Identities=14%  Similarity=0.125  Sum_probs=150.7

Q ss_pred             CCCCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC---C
Q 025755            1 MSGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA---G   77 (248)
Q Consensus         1 m~~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~---~   77 (248)
                      |+.+++|+++||||+|+||+++++.|+++|++|+++.++..+........     ..+.++.+|++|.+++.++++   .
T Consensus         1 m~~~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~-----~~~~~~~~D~~~~~~~~~~~~~~~~   75 (237)
T PRK12742          1 MGAFTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQE-----TGATAVQTDSADRDAVIDVVRKSGA   75 (237)
T ss_pred             CCCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHH-----hCCeEEecCCCCHHHHHHHHHHhCC
Confidence            77789999999999999999999999999999998876543222221111     135678899999988877765   4


Q ss_pred             CCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHHhc--CCCEEEEEecccee-ccCCCCCCCCccCCCCCC
Q 025755           78 CTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCVKA--KVKRVVVVSSIGAV-MLNPNWPKGQVMDEECWS  150 (248)
Q Consensus        78 id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~~~--~~~~iV~vSS~~~~-~~~~~~~~~~~~~e~~~~  150 (248)
                      +|++|||||.......    .++++..+++|+.++.++++.+.+.  +.++||++||..+. .+.+.             
T Consensus        76 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~-------------  142 (237)
T PRK12742         76 LDILVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNGDRMPVAG-------------  142 (237)
T ss_pred             CcEEEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEeccccccCCCCC-------------
Confidence            8999999997543321    2345778999999999998777654  35799999996542 22222             


Q ss_pred             chhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCCCccHHHHHHHH-cC------------
Q 025755          151 DEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTINTSSLLLLGFL-KG------------  214 (248)
Q Consensus       151 ~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~-~~------------  214 (248)
                              ...|+.+|+..+.+++.++.+   .+++|++|+||.+.+++...... ......... .+            
T Consensus       143 --------~~~Y~~sKaa~~~~~~~la~~~~~~gi~v~~v~Pg~~~t~~~~~~~~-~~~~~~~~~~~~~~~~p~~~a~~~  213 (237)
T PRK12742        143 --------MAAYAASKSALQGMARGLARDFGPRGITINVVQPGPIDTDANPANGP-MKDMMHSFMAIKRHGRPEEVAGMV  213 (237)
T ss_pred             --------CcchHHhHHHHHHHHHHHHHHHhhhCeEEEEEecCcccCCccccccH-HHHHHHhcCCCCCCCCHHHHHHHH
Confidence                    223999998777777766553   36999999999999987543211 111111110 01            


Q ss_pred             CCCCCCCCchhhhhhhhhccceeE
Q 025755          215 FFFTTPSHSYMLERTLVLNQGVRL  238 (248)
Q Consensus       215 ~~l~~~~~~~~~g~~l~vd~g~~~  238 (248)
                      .++.++...+++|+++.+|||+.+
T Consensus       214 ~~l~s~~~~~~~G~~~~~dgg~~~  237 (237)
T PRK12742        214 AWLAGPEASFVTGAMHTIDGAFGA  237 (237)
T ss_pred             HHHcCcccCcccCCEEEeCCCcCC
Confidence            167777789999999999999753

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.96  E-value=8.9e-29  Score=203.01  Aligned_cols=214  Identities=14%  Similarity=0.090  Sum_probs=149.9

Q ss_pred             CCCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcC-CCCCeEEEEccCCCHHHHHHHhC----
Q 025755            2 SGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEG-ASENLQLFKTDLLDYEALCAATA----   76 (248)
Q Consensus         2 ~~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Di~d~~~~~~~~~----   76 (248)
                      .++++|+++||||++|||++++++|+++|++|++++|+..+......+.+.. ...++.++.+|++|.++++++++    
T Consensus         4 ~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   83 (260)
T PRK08416          4 NEMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDE   83 (260)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999998876543333333333322 23578899999999998888775    


Q ss_pred             ---CCCEEEEccccCCCC------C----CCCccccchhhhHHHHHHHHHHHH----hcCCCEEEEEeccceeccCCCCC
Q 025755           77 ---GCTGVFHVACPVPVG------K----VPNPEVQLIDPAVVGTKNVLNSCV----KAKVKRVVVVSSIGAVMLNPNWP  139 (248)
Q Consensus        77 ---~id~vi~~ag~~~~~------~----~~~~~~~~~~~n~~g~~~~~~~~~----~~~~~~iV~vSS~~~~~~~~~~~  139 (248)
                         ++|++|||||.....      .    ..+.+...+++|+.+...+.+.+.    +.+.++||++||..+..+.+.+.
T Consensus        84 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  163 (260)
T PRK08416         84 DFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLVYIENYA  163 (260)
T ss_pred             hcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEeccccccCCCCcc
Confidence               479999999865311      0    012345678888888766655554    33557999999976655544433


Q ss_pred             CCCccCCCCCCchhhhccccchHHHHHHHHHHHHHHHHHhC---CccEEEEccCeeecCCCCCCCCccHHHHHHH----H
Q 025755          140 KGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKRG---ELDIVTVCPSIVIGPMLQPTINTSSLLLLGF----L  212 (248)
Q Consensus       140 ~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~---~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~----~  212 (248)
                      .                     |+.||++.+.+++.++.++   |++|++|+||.+.+++...... ........    .
T Consensus       164 ~---------------------Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~~~~~~~-~~~~~~~~~~~~~  221 (260)
T PRK08416        164 G---------------------HGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDALKAFTN-YEEVKAKTEELSP  221 (260)
T ss_pred             c---------------------chhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChhhhhccC-CHHHHHHHHhcCC
Confidence            3                     9999987766666666543   6999999999999986432111 01111111    1


Q ss_pred             cCC------------CCCCCCCchhhhhhhhhcccee
Q 025755          213 KGF------------FFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       213 ~~~------------~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                      .++            ++..+...|++|+.+.+|||+.
T Consensus       222 ~~r~~~p~~va~~~~~l~~~~~~~~~G~~i~vdgg~~  258 (260)
T PRK08416        222 LNRMGQPEDLAGACLFLCSEKASWLTGQTIVVDGGTT  258 (260)
T ss_pred             CCCCCCHHHHHHHHHHHcChhhhcccCcEEEEcCCee
Confidence            111            6667777899999999999975

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.96  E-value=8.8e-29  Score=203.15  Aligned_cols=213  Identities=15%  Similarity=0.112  Sum_probs=150.9

Q ss_pred             CCCCCCcEEEEEcC--ccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC--
Q 025755            1 MSGEDKERVCVTGA--GGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA--   76 (248)
Q Consensus         1 m~~l~~k~vlVtG~--~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~--   76 (248)
                      |..+++|+++||||  ++|||+++++.|+++|++|++.+|+..  .....+++....+....+++|++|.++++++++  
T Consensus         1 ~~~~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~--~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   78 (261)
T PRK08690          1 MGFLQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDK--LEERVRKMAAELDSELVFRCDVASDDEINQVFADL   78 (261)
T ss_pred             CCccCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHH--HHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHH
Confidence            66788999999997  679999999999999999999877532  222333333222345578999999999888774  


Q ss_pred             -----CCCEEEEccccCCCC----C----C-CCccccchhhhHHHHHHHHHHHHhc---CCCEEEEEeccceeccCCCCC
Q 025755           77 -----GCTGVFHVACPVPVG----K----V-PNPEVQLIDPAVVGTKNVLNSCVKA---KVKRVVVVSSIGAVMLNPNWP  139 (248)
Q Consensus        77 -----~id~vi~~ag~~~~~----~----~-~~~~~~~~~~n~~g~~~~~~~~~~~---~~~~iV~vSS~~~~~~~~~~~  139 (248)
                           ++|++|||||.....    .    . .+.|...+++|+.++..+.+.+.+.   +.++||++||..+..+.+.+.
T Consensus        79 ~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~~g~Iv~iss~~~~~~~~~~~  158 (261)
T PRK08690         79 GKHWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRNSAIVALSYLGAVRAIPNYN  158 (261)
T ss_pred             HHHhCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhcCcEEEEEcccccccCCCCcc
Confidence                 589999999986431    1    1 1234567899999988887776543   236899999987766555444


Q ss_pred             CCCccCCCCCCchhhhccccchHHHHHHHH----HHHHHHHHHhCCccEEEEccCeeecCCCCCCCCccHHHHHHH----
Q 025755          140 KGQVMDEECWSDEEFCKATENYYCLAKTIA----EIQALEYAKRGELDIVTVCPSIVIGPMLQPTINTSSLLLLGF----  211 (248)
Q Consensus       140 ~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~----e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~----  211 (248)
                      .                     |+.||+..    +.++.+++++ ||||++|+||.+.+++...... .......+    
T Consensus       159 ~---------------------Y~asKaal~~l~~~la~e~~~~-gIrVn~i~PG~v~T~~~~~~~~-~~~~~~~~~~~~  215 (261)
T PRK08690        159 V---------------------MGMAKASLEAGIRFTAACLGKE-GIRCNGISAGPIKTLAASGIAD-FGKLLGHVAAHN  215 (261)
T ss_pred             c---------------------chhHHHHHHHHHHHHHHHhhhc-CeEEEEEecCcccchhhhcCCc-hHHHHHHHhhcC
Confidence            4                     99999654    4555555554 5999999999999986432111 01111111    


Q ss_pred             HcCC------------CCCCCCCchhhhhhhhhccceeE
Q 025755          212 LKGF------------FFTTPSHSYMLERTLVLNQGVRL  238 (248)
Q Consensus       212 ~~~~------------~l~~~~~~~~~g~~l~vd~g~~~  238 (248)
                      ..++            |+..+.+.|++|+++.+|||+.+
T Consensus       216 p~~r~~~peevA~~v~~l~s~~~~~~tG~~i~vdgG~~~  254 (261)
T PRK08690        216 PLRRNVTIEEVGNTAAFLLSDLSSGITGEITYVDGGYSI  254 (261)
T ss_pred             CCCCCCCHHHHHHHHHHHhCcccCCcceeEEEEcCCccc
Confidence            1111            67777889999999999999764

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.96  E-value=1e-28  Score=202.51  Aligned_cols=211  Identities=14%  Similarity=0.051  Sum_probs=149.3

Q ss_pred             CCCCcEEEEEcCc--cHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC----
Q 025755            3 GEDKERVCVTGAG--GYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA----   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~--g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~----   76 (248)
                      ++++|+++||||+  +|||++++++|+++|++|++++|+...  ....+.+....+...++.+|++|.++++++++    
T Consensus         7 ~~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~--~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   84 (258)
T PRK07533          7 PLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKA--RPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAE   84 (258)
T ss_pred             ccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhh--HHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHH
Confidence            4788999999998  599999999999999999999987532  11122222112345678999999999888764    


Q ss_pred             ---CCCEEEEccccCCCC--------CCCCccccchhhhHHHHHHHHHHHHhc--CCCEEEEEeccceeccCCCCCCCCc
Q 025755           77 ---GCTGVFHVACPVPVG--------KVPNPEVQLIDPAVVGTKNVLNSCVKA--KVKRVVVVSSIGAVMLNPNWPKGQV  143 (248)
Q Consensus        77 ---~id~vi~~ag~~~~~--------~~~~~~~~~~~~n~~g~~~~~~~~~~~--~~~~iV~vSS~~~~~~~~~~~~~~~  143 (248)
                         ++|++|||||.....        ...+.|+..+++|+.++.++++.+.+.  ..++||++||..+..+.+.+.    
T Consensus        85 ~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~~~~~~~~~~~----  160 (258)
T PRK07533         85 EWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYYGAEKVVENYN----  160 (258)
T ss_pred             HcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEeccccccCCccch----
Confidence               579999999975421        112345778999999999998887664  346999999976554443322    


Q ss_pred             cCCCCCCchhhhccccchHHHHHHH----HHHHHHHHHHhCCccEEEEccCeeecCCCCCCCCccHHHHHHHH----cCC
Q 025755          144 MDEECWSDEEFCKATENYYCLAKTI----AEIQALEYAKRGELDIVTVCPSIVIGPMLQPTINTSSLLLLGFL----KGF  215 (248)
Q Consensus       144 ~~e~~~~~~~~~~~~~~~Y~~sK~~----~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~----~~~  215 (248)
                                       .|+.||++    ++.++.++.++ ||+|++|+||.+.+++...... .........    .++
T Consensus       161 -----------------~Y~asKaal~~l~~~la~el~~~-gI~Vn~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~p~~r  221 (258)
T PRK07533        161 -----------------LMGPVKAALESSVRYLAAELGPK-GIRVHAISPGPLKTRAASGIDD-FDALLEDAAERAPLRR  221 (258)
T ss_pred             -----------------hhHHHHHHHHHHHHHHHHHhhhc-CcEEEEEecCCcCChhhhccCC-cHHHHHHHHhcCCcCC
Confidence                             39999974    55555555544 5999999999999987532111 111111111    111


Q ss_pred             ------------CCCCCCCchhhhhhhhhccceeE
Q 025755          216 ------------FFTTPSHSYMLERTLVLNQGVRL  238 (248)
Q Consensus       216 ------------~l~~~~~~~~~g~~l~vd~g~~~  238 (248)
                                  ++.++...+++|+.+.+|||+..
T Consensus       222 ~~~p~dva~~~~~L~s~~~~~itG~~i~vdgg~~~  256 (258)
T PRK07533        222 LVDIDDVGAVAAFLASDAARRLTGNTLYIDGGYHI  256 (258)
T ss_pred             CCCHHHHHHHHHHHhChhhccccCcEEeeCCcccc
Confidence                        67777789999999999999764

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.96  E-value=5.4e-29  Score=204.28  Aligned_cols=215  Identities=15%  Similarity=0.076  Sum_probs=150.8

Q ss_pred             CCCCCCcEEEEEcC--ccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC--
Q 025755            1 MSGEDKERVCVTGA--GGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA--   76 (248)
Q Consensus         1 m~~l~~k~vlVtG~--~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~--   76 (248)
                      |..+++|+++||||  ++|||++++++|+++|++|++.+|...  ..+..+.+....+....+.+|++|+++++++++  
T Consensus         1 ~~~l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~--~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~   78 (260)
T PRK06997          1 MGFLAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDR--FKDRITEFAAEFGSDLVFPCDVASDEQIDALFASL   78 (260)
T ss_pred             CCccCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchH--HHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHH
Confidence            66788999999996  689999999999999999999876421  111222221111223468899999999888775  


Q ss_pred             -----CCCEEEEccccCCCC---------CCCCccccchhhhHHHHHHHHHHHHhc--CCCEEEEEeccceeccCCCCCC
Q 025755           77 -----GCTGVFHVACPVPVG---------KVPNPEVQLIDPAVVGTKNVLNSCVKA--KVKRVVVVSSIGAVMLNPNWPK  140 (248)
Q Consensus        77 -----~id~vi~~ag~~~~~---------~~~~~~~~~~~~n~~g~~~~~~~~~~~--~~~~iV~vSS~~~~~~~~~~~~  140 (248)
                           ++|++|||||.....         ...++|...+++|+.++..+.+++.+.  +.++||++||..+..+.+.+..
T Consensus        79 ~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~~g~Ii~iss~~~~~~~~~~~~  158 (260)
T PRK06997         79 GQHWDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERVVPNYNT  158 (260)
T ss_pred             HHHhCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeccccccCCCCcch
Confidence                 589999999975421         112345678999999999988888764  3479999999776555443333


Q ss_pred             CCccCCCCCCchhhhccccchHHHHHH----HHHHHHHHHHHhCCccEEEEccCeeecCCCCCCCCccHHHH----HHHH
Q 025755          141 GQVMDEECWSDEEFCKATENYYCLAKT----IAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTINTSSLLL----LGFL  212 (248)
Q Consensus       141 ~~~~~e~~~~~~~~~~~~~~~Y~~sK~----~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~~~~~~~----~~~~  212 (248)
                                           |+.||+    +++.++.+++++ |||||+|+||.+.+++...... .....    ....
T Consensus       159 ---------------------Y~asKaal~~l~~~la~el~~~-gIrVn~i~PG~v~T~~~~~~~~-~~~~~~~~~~~~p  215 (260)
T PRK06997        159 ---------------------MGLAKASLEASVRYLAVSLGPK-GIRANGISAGPIKTLAASGIKD-FGKILDFVESNAP  215 (260)
T ss_pred             ---------------------HHHHHHHHHHHHHHHHHHhccc-CeEEEEEeeCccccchhccccc-hhhHHHHHHhcCc
Confidence                                 999996    555555555554 5999999999999976432110 01111    1111


Q ss_pred             cCC------------CCCCCCCchhhhhhhhhccceeEEE
Q 025755          213 KGF------------FFTTPSHSYMLERTLVLNQGVRLYR  240 (248)
Q Consensus       213 ~~~------------~l~~~~~~~~~g~~l~vd~g~~~~~  240 (248)
                      .++            |+.++.+.|++|+++.+|||+..+.
T Consensus       216 ~~r~~~pedva~~~~~l~s~~~~~itG~~i~vdgg~~~~~  255 (260)
T PRK06997        216 LRRNVTIEEVGNVAAFLLSDLASGVTGEITHVDSGFNAVV  255 (260)
T ss_pred             ccccCCHHHHHHHHHHHhCccccCcceeEEEEcCChhhcc
Confidence            111            6777888999999999999987653

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.96  E-value=1.3e-28  Score=202.02  Aligned_cols=211  Identities=10%  Similarity=0.027  Sum_probs=149.3

Q ss_pred             CCCcEEEEEcCcc--HHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-----
Q 025755            4 EDKERVCVTGAGG--YIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-----   76 (248)
Q Consensus         4 l~~k~vlVtG~~g--~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-----   76 (248)
                      +++|+++||||++  |||+++++.|+++|++|++.+|+..  .....+.+....+...++++|++|.++++++++     
T Consensus         6 ~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~--~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~   83 (260)
T PRK06603          6 LQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEV--LEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEK   83 (260)
T ss_pred             cCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchH--HHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHH
Confidence            6789999999997  9999999999999999999887632  122223332221223467899999999888775     


Q ss_pred             --CCCEEEEccccCCCC-------C-CCCccccchhhhHHHHHHHHHHHHhc--CCCEEEEEeccceeccCCCCCCCCcc
Q 025755           77 --GCTGVFHVACPVPVG-------K-VPNPEVQLIDPAVVGTKNVLNSCVKA--KVKRVVVVSSIGAVMLNPNWPKGQVM  144 (248)
Q Consensus        77 --~id~vi~~ag~~~~~-------~-~~~~~~~~~~~n~~g~~~~~~~~~~~--~~~~iV~vSS~~~~~~~~~~~~~~~~  144 (248)
                        ++|++|||||.....       + ..+.|...+++|+.++..+++++.+.  ..++||++||..+..+.+.+..    
T Consensus        84 ~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~~~~~~~----  159 (260)
T PRK06603         84 WGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDGGSIVTLTYYGAEKVIPNYNV----  159 (260)
T ss_pred             cCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCceEEEEecCccccCCCcccc----
Confidence              489999999975321       1 12346678999999999988887654  3379999999776555444333    


Q ss_pred             CCCCCCchhhhccccchHHHHHH----HHHHHHHHHHHhCCccEEEEccCeeecCCCCCCCCccHHHHHHH----HcCC-
Q 025755          145 DEECWSDEEFCKATENYYCLAKT----IAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTINTSSLLLLGF----LKGF-  215 (248)
Q Consensus       145 ~e~~~~~~~~~~~~~~~Y~~sK~----~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~----~~~~-  215 (248)
                                       |+.||+    +++.++.+++++ ||+||+|+||.+.+++...... ........    ..++ 
T Consensus       160 -----------------Y~asKaal~~l~~~la~el~~~-gIrVn~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~p~~r~  220 (260)
T PRK06603        160 -----------------MGVAKAALEASVKYLANDMGEN-NIRVNAISAGPIKTLASSAIGD-FSTMLKSHAATAPLKRN  220 (260)
T ss_pred             -----------------hhhHHHHHHHHHHHHHHHhhhc-CeEEEEEecCcCcchhhhcCCC-cHHHHHHHHhcCCcCCC
Confidence                             999996    555556666554 5999999999999986421111 11111111    1111 


Q ss_pred             -----------CCCCCCCchhhhhhhhhccceeEE
Q 025755          216 -----------FFTTPSHSYMLERTLVLNQGVRLY  239 (248)
Q Consensus       216 -----------~l~~~~~~~~~g~~l~vd~g~~~~  239 (248)
                                 |+.++.+.|++|+.+.+|||+.+.
T Consensus       221 ~~pedva~~~~~L~s~~~~~itG~~i~vdgG~~~~  255 (260)
T PRK06603        221 TTQEDVGGAAVYLFSELSKGVTGEIHYVDCGYNIM  255 (260)
T ss_pred             CCHHHHHHHHHHHhCcccccCcceEEEeCCccccc
Confidence                       778888899999999999997653

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.96  E-value=6.8e-29  Score=205.08  Aligned_cols=210  Identities=11%  Similarity=0.077  Sum_probs=148.3

Q ss_pred             CCCcEEEEEcCc--cHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcC-CCCCeEEEEccCCCHHHHHHHhC----
Q 025755            4 EDKERVCVTGAG--GYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEG-ASENLQLFKTDLLDYEALCAATA----   76 (248)
Q Consensus         4 l~~k~vlVtG~~--g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Di~d~~~~~~~~~----   76 (248)
                      +++|+++||||+  +|||+++++.|+++|++|++.+|+..  ..+..+.+.. .... .++++|++|.++++++++    
T Consensus         3 l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~--~~~~~~~~~~~~~~~-~~~~~Dv~d~~~v~~~~~~i~~   79 (274)
T PRK08415          3 MKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEA--LKKRVEPIAQELGSD-YVYELDVSKPEHFKSLAESLKK   79 (274)
T ss_pred             cCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHH--HHHHHHHHHHhcCCc-eEEEecCCCHHHHHHHHHHHHH
Confidence            789999999997  89999999999999999999998742  1111222211 1223 578999999999888765    


Q ss_pred             ---CCCEEEEccccCCC----C----CCCCccccchhhhHHHHHHHHHHHHhc--CCCEEEEEeccceeccCCCCCCCCc
Q 025755           77 ---GCTGVFHVACPVPV----G----KVPNPEVQLIDPAVVGTKNVLNSCVKA--KVKRVVVVSSIGAVMLNPNWPKGQV  143 (248)
Q Consensus        77 ---~id~vi~~ag~~~~----~----~~~~~~~~~~~~n~~g~~~~~~~~~~~--~~~~iV~vSS~~~~~~~~~~~~~~~  143 (248)
                         ++|++|||||....    .    ...+.|+..+++|+.++..+.+++.+.  ..++||++||..+..+.+.+..   
T Consensus        80 ~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~~~~~~~~~~~---  156 (274)
T PRK08415         80 DLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLGGVKYVPHYNV---  156 (274)
T ss_pred             HcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCCCccCCCcchh---
Confidence               57999999997532    1    112445778999999999888888764  3379999999776555443333   


Q ss_pred             cCCCCCCchhhhccccchHHHHHH----HHHHHHHHHHHhCCccEEEEccCeeecCCCCCCCCc--cHHHHH-HHHcCC-
Q 025755          144 MDEECWSDEEFCKATENYYCLAKT----IAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTINT--SSLLLL-GFLKGF-  215 (248)
Q Consensus       144 ~~e~~~~~~~~~~~~~~~Y~~sK~----~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~~--~~~~~~-~~~~~~-  215 (248)
                                        |+.||+    +++.++.++.++ |++||+|+||.+.+++.......  ...+.. ....++ 
T Consensus       157 ------------------Y~asKaal~~l~~~la~el~~~-gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~r~  217 (274)
T PRK08415        157 ------------------MGVAKAALESSVRYLAVDLGKK-GIRVNAISAGPIKTLAASGIGDFRMILKWNEINAPLKKN  217 (274)
T ss_pred             ------------------hhhHHHHHHHHHHHHHHHhhhc-CeEEEEEecCccccHHHhccchhhHHhhhhhhhCchhcc
Confidence                              999996    555555555554 59999999999999764311000  000000 000011 


Q ss_pred             -----------CCCCCCCchhhhhhhhhccceeE
Q 025755          216 -----------FFTTPSHSYMLERTLVLNQGVRL  238 (248)
Q Consensus       216 -----------~l~~~~~~~~~g~~l~vd~g~~~  238 (248)
                                 |+.++...|++|+.+.+|||+..
T Consensus       218 ~~pedva~~v~fL~s~~~~~itG~~i~vdGG~~~  251 (274)
T PRK08415        218 VSIEEVGNSGMYLLSDLSSGVTGEIHYVDAGYNI  251 (274)
T ss_pred             CCHHHHHHHHHHHhhhhhhcccccEEEEcCcccc
Confidence                       77788889999999999999763

>PRK07856 short chain dehydrogenase; Provisional

Probab=99.96  E-value=1.5e-28  Score=200.63  Aligned_cols=206  Identities=15%  Similarity=0.093  Sum_probs=154.9

Q ss_pred             CCCCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC----
Q 025755            1 MSGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA----   76 (248)
Q Consensus         1 m~~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~----   76 (248)
                      |+++++|+++||||+|+||+++++.|+++|++|++++|+...         .....++.++++|+.|.++++++++    
T Consensus         1 ~~~~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~---------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   71 (252)
T PRK07856          1 NLDLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE---------TVDGRPAEFHAADVRDPDQVAALVDAIVE   71 (252)
T ss_pred             CCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh---------hhcCCceEEEEccCCCHHHHHHHHHHHHH
Confidence            566899999999999999999999999999999999997632         0113468899999999998888775    


Q ss_pred             ---CCCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHHhc-----CCCEEEEEeccceeccCCCCCCCCcc
Q 025755           77 ---GCTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCVKA-----KVKRVVVVSSIGAVMLNPNWPKGQVM  144 (248)
Q Consensus        77 ---~id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~~~-----~~~~iV~vSS~~~~~~~~~~~~~~~~  144 (248)
                         ++|+||||||.......    .+.+...+++|+.++.++++++.+.     +.++||++||..+..+.+....    
T Consensus        72 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~----  147 (252)
T PRK07856         72 RHGRLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRPSPGTAA----  147 (252)
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCCCCCCch----
Confidence               46999999997654321    2334678999999999999988652     3479999999877665544333    


Q ss_pred             CCCCCCchhhhccccchHHHHHHHHHHHHHHHHHhC--CccEEEEccCeeecCCCCCCCCccHHHHHHHH----cCC---
Q 025755          145 DEECWSDEEFCKATENYYCLAKTIAEIQALEYAKRG--ELDIVTVCPSIVIGPMLQPTINTSSLLLLGFL----KGF---  215 (248)
Q Consensus       145 ~e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~--~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~----~~~---  215 (248)
                                       |+.+|++.+.+++.++.++  .+++++++||.+.+++...... .........    .++   
T Consensus       148 -----------------Y~~sK~a~~~l~~~la~e~~~~i~v~~i~Pg~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~  209 (252)
T PRK07856        148 -----------------YGAAKAGLLNLTRSLAVEWAPKVRVNAVVVGLVRTEQSELHYG-DAEGIAAVAATVPLGRLAT  209 (252)
T ss_pred             -----------------hHHHHHHHHHHHHHHHHHhcCCeEEEEEEeccccChHHhhhcc-CHHHHHHHhhcCCCCCCcC
Confidence                             9999998888888777643  3999999999999986432110 011111110    011   


Q ss_pred             ---------CCCCCCCchhhhhhhhhcccee
Q 025755          216 ---------FFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       216 ---------~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                               ++..+...+++|+.+.+|||..
T Consensus       210 p~~va~~~~~L~~~~~~~i~G~~i~vdgg~~  240 (252)
T PRK07856        210 PADIAWACLFLASDLASYVSGANLEVHGGGE  240 (252)
T ss_pred             HHHHHHHHHHHcCcccCCccCCEEEECCCcc
Confidence                     6677777899999999999965

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=99.96  E-value=2.1e-28  Score=200.05  Aligned_cols=210  Identities=12%  Similarity=0.085  Sum_probs=152.2

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-------
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-------   76 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-------   76 (248)
                      +++|+++|||++|+||++++++|+++|++|++++++...   +..+.+.....++..+++|++|.++++++++       
T Consensus         8 l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~~---~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   84 (253)
T PRK08993          8 LEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPT---ETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEFG   84 (253)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcchH---HHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            678999999999999999999999999999988775422   2222222234568889999999999888775       


Q ss_pred             CCCEEEEccccCCCCC----CCCccccchhhhHHHHHHHHHHHHhc----C-CCEEEEEeccceeccCCCCCCCCccCCC
Q 025755           77 GCTGVFHVACPVPVGK----VPNPEVQLIDPAVVGTKNVLNSCVKA----K-VKRVVVVSSIGAVMLNPNWPKGQVMDEE  147 (248)
Q Consensus        77 ~id~vi~~ag~~~~~~----~~~~~~~~~~~n~~g~~~~~~~~~~~----~-~~~iV~vSS~~~~~~~~~~~~~~~~~e~  147 (248)
                      ++|++|||||......    ..+++...+++|+.++.++++++.+.    + .++||++||..++.+.+....       
T Consensus        85 ~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~-------  157 (253)
T PRK08993         85 HIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIRVPS-------  157 (253)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCCCCCcc-------
Confidence            4899999999754332    12456788999999999888887543    2 368999999876665543333       


Q ss_pred             CCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCCC--c-cHHHHHHHHcCC------
Q 025755          148 CWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTIN--T-SSLLLLGFLKGF------  215 (248)
Q Consensus       148 ~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~~--~-~~~~~~~~~~~~------  215 (248)
                                    |+.+|++.+.+++.++.+   .|++|++|+||.+.+++......  . ...+......++      
T Consensus       158 --------------Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~e  223 (253)
T PRK08993        158 --------------YTASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQLRADEQRSAEILDRIPAGRWGLPSD  223 (253)
T ss_pred             --------------hHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCcchhhhccchHHHHHHHhcCCCCCCcCHHH
Confidence                          999998665555555443   36999999999999986432100  0 011111111111      


Q ss_pred             ------CCCCCCCchhhhhhhhhcccee
Q 025755          216 ------FFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       216 ------~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                            ++.++.+.+++|+++.+|||..
T Consensus       224 va~~~~~l~s~~~~~~~G~~~~~dgg~~  251 (253)
T PRK08993        224 LMGPVVFLASSASDYINGYTIAVDGGWL  251 (253)
T ss_pred             HHHHHHHHhCccccCccCcEEEECCCEe
Confidence                  7778888999999999999965

>PLN02253 xanthoxin dehydrogenase

Probab=99.96  E-value=3.6e-28  Score=201.44  Aligned_cols=215  Identities=16%  Similarity=0.087  Sum_probs=155.1

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC------
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA------   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~------   76 (248)
                      .+++|+++||||+|+||+++++.|+++|++|++++|+... .....+.+ ....++.++++|++|.++++++++      
T Consensus        15 ~l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~   92 (280)
T PLN02253         15 RLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDL-GQNVCDSL-GGEPNVCFFHCDVTVEDDVSRAVDFTVDKF   92 (280)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHH-HHHHHHHh-cCCCceEEEEeecCCHHHHHHHHHHHHHHh
Confidence            3678999999999999999999999999999999987532 22222223 223578899999999999888776      


Q ss_pred             -CCCEEEEccccCCCC--C----CCCccccchhhhHHHHHHHHHHHHh----cCCCEEEEEeccceeccCCCCCCCCccC
Q 025755           77 -GCTGVFHVACPVPVG--K----VPNPEVQLIDPAVVGTKNVLNSCVK----AKVKRVVVVSSIGAVMLNPNWPKGQVMD  145 (248)
Q Consensus        77 -~id~vi~~ag~~~~~--~----~~~~~~~~~~~n~~g~~~~~~~~~~----~~~~~iV~vSS~~~~~~~~~~~~~~~~~  145 (248)
                       ++|+||||||.....  .    ..+.++.++++|+.++.++++++.+    .+.++||++||..+..+.+....     
T Consensus        93 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~-----  167 (280)
T PLN02253         93 GTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGGLGPHA-----  167 (280)
T ss_pred             CCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcccCCCCcc-----
Confidence             689999999975421  1    1234567899999999998887764    34579999999877665543222     


Q ss_pred             CCCCCchhhhccccchHHHHHHHHHHHHHHHHHhC---CccEEEEccCeeecCCCCCC---CCccHHHH---HHH-H---
Q 025755          146 EECWSDEEFCKATENYYCLAKTIAEIQALEYAKRG---ELDIVTVCPSIVIGPMLQPT---INTSSLLL---LGF-L---  212 (248)
Q Consensus       146 e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~---~i~v~~vrpg~i~g~~~~~~---~~~~~~~~---~~~-~---  212 (248)
                                      |+.||++.+.+++.++.+.   +++|++++||.+.+++....   .......+   ... .   
T Consensus       168 ----------------Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (280)
T PLN02253        168 ----------------YTGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTALALAHLPEDERTEDALAGFRAFAGKNA  231 (280)
T ss_pred             ----------------cHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccccccccccccchhhhhhhhHHHhhcCC
Confidence                            9999987777777766543   69999999999998853211   00000000   000 0   


Q ss_pred             --cC------------CCCCCCCCchhhhhhhhhccceeEEE
Q 025755          213 --KG------------FFFTTPSHSYMLERTLVLNQGVRLYR  240 (248)
Q Consensus       213 --~~------------~~l~~~~~~~~~g~~l~vd~g~~~~~  240 (248)
                        .+            .++.++...|++|+.+.+|||+....
T Consensus       232 ~l~~~~~~~~dva~~~~~l~s~~~~~i~G~~i~vdgG~~~~~  273 (280)
T PLN02253        232 NLKGVELTVDDVANAVLFLASDEARYISGLNLMIDGGFTCTN  273 (280)
T ss_pred             CCcCCCCCHHHHHHHHHhhcCcccccccCcEEEECCchhhcc
Confidence              01            16677778999999999999976543

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=99.96  E-value=4.5e-28  Score=198.71  Aligned_cols=208  Identities=18%  Similarity=0.049  Sum_probs=147.1

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-------
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-------   76 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-------   76 (248)
                      +++|+++||||+||||+++++.|+++|++|++++|+..  .....+.+.....++.++.+|++|.+++.++++       
T Consensus         6 ~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   83 (260)
T PRK12823          6 FAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSEL--VHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAFG   83 (260)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchH--HHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcC
Confidence            67899999999999999999999999999999998742  222333333334568889999999988877765       


Q ss_pred             CCCEEEEccccCCC-C----CCCCccccchhhhHHHHHHHHHHH----HhcCCCEEEEEeccceeccCCCCCCCCccCCC
Q 025755           77 GCTGVFHVACPVPV-G----KVPNPEVQLIDPAVVGTKNVLNSC----VKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEE  147 (248)
Q Consensus        77 ~id~vi~~ag~~~~-~----~~~~~~~~~~~~n~~g~~~~~~~~----~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~  147 (248)
                      ++|++|||||.... .    ...+.+...+++|+.++..+++.+    ++.+.++||++||...+ +. ..         
T Consensus        84 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~-~~-~~---------  152 (260)
T PRK12823         84 RIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATR-GI-NR---------  152 (260)
T ss_pred             CCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCcccc-CC-CC---------
Confidence            58999999985421 1    113345667899999887555554    44566899999997643 21 11         


Q ss_pred             CCCchhhhccccchHHHHHHHHHHHHHHHHHhC---CccEEEEccCeeecCCCCC--------C--CCccHHHHHHHHcC
Q 025755          148 CWSDEEFCKATENYYCLAKTIAEIQALEYAKRG---ELDIVTVCPSIVIGPMLQP--------T--INTSSLLLLGFLKG  214 (248)
Q Consensus       148 ~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~---~i~v~~vrpg~i~g~~~~~--------~--~~~~~~~~~~~~~~  214 (248)
                                  .+|+.||++.+.+++.++.+.   ++++++|+||++++|+...        .  ......+..+...+
T Consensus       153 ------------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (260)
T PRK12823        153 ------------VPYSAAKGGVNALTASLAFEYAEHGIRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQTLDS  220 (260)
T ss_pred             ------------CccHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccCCcchhhHHhhccccccccccHHHHHHHHhcc
Confidence                        129999987777777776543   7999999999999985210        0  01111222222111


Q ss_pred             C----------------CCCCCCCchhhhhhhhhccce
Q 025755          215 F----------------FFTTPSHSYMLERTLVLNQGV  236 (248)
Q Consensus       215 ~----------------~l~~~~~~~~~g~~l~vd~g~  236 (248)
                      .                ++.++...+++|+.+.+|||.
T Consensus       221 ~~~~~~~~~~dva~~~~~l~s~~~~~~~g~~~~v~gg~  258 (260)
T PRK12823        221 SLMKRYGTIDEQVAAILFLASDEASYITGTVLPVGGGD  258 (260)
T ss_pred             CCcccCCCHHHHHHHHHHHcCcccccccCcEEeecCCC
Confidence            1                666777889999999999985

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.96  E-value=1.4e-28  Score=226.22  Aligned_cols=233  Identities=18%  Similarity=0.213  Sum_probs=172.1

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHC--CCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHh--CCCC
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLK--GYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAAT--AGCT   79 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~--~~id   79 (248)
                      .++|+||||||+||||++++++|+++  +++|++++|.........+... ....++.++.+|++|.+.+..++  .++|
T Consensus         4 ~~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~~-~~~~~v~~~~~Dl~d~~~~~~~~~~~~~D   82 (668)
T PLN02260          4 YEPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPS-KSSPNFKFVKGDIASADLVNYLLITEGID   82 (668)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhhc-ccCCCeEEEECCCCChHHHHHHHhhcCCC
Confidence            46789999999999999999999997  6899988874311111111111 11357899999999998888765  5799


Q ss_pred             EEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcC-CCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccc
Q 025755           80 GVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAK-VKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKAT  158 (248)
Q Consensus        80 ~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~-~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~  158 (248)
                      +|||+|+............+++++|+.++.++++++++.+ .+++||+||.. +|+........+.+|+.+..      |
T Consensus        83 ~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS~~-vyg~~~~~~~~~~~E~~~~~------p  155 (668)
T PLN02260         83 TIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDE-VYGETDEDADVGNHEASQLL------P  155 (668)
T ss_pred             EEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcchH-HhCCCccccccCccccCCCC------C
Confidence            9999999876543333446788999999999999999986 78999999965 55543211101123443332      4


Q ss_pred             cchHHHHHHHHHHHHHHHHHhCCccEEEEccCeeecCCCCCCCCccHHHHHHHHcCCCCCCCCCchhhhhhhhhccceeE
Q 025755          159 ENYYCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKGFFFTTPSHSYMLERTLVLNQGVRL  238 (248)
Q Consensus       159 ~~~Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~l~vd~g~~~  238 (248)
                      .+.|+.+|..+|.++..++.+++++++++||+++|||.+... ...+.++..+..+..+...+++....+.+||||...+
T Consensus       156 ~~~Y~~sK~~aE~~v~~~~~~~~l~~vilR~~~VyGp~~~~~-~~i~~~~~~a~~g~~i~i~g~g~~~r~~ihV~Dva~a  234 (668)
T PLN02260        156 TNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPE-KLIPKFILLAMQGKPLPIHGDGSNVRSYLYCEDVAEA  234 (668)
T ss_pred             CCCcHHHHHHHHHHHHHHHHHcCCCEEEECcccccCcCCCcc-cHHHHHHHHHhCCCCeEEecCCCceEeeEEHHHHHHH
Confidence            566999999999999999988889999999999999986532 3455667777777766665666666678999999887


Q ss_pred             EEeeccC
Q 025755          239 YRCKIQI  245 (248)
Q Consensus       239 ~~~~~~~  245 (248)
                      +..+++.
T Consensus       235 ~~~~l~~  241 (668)
T PLN02260        235 FEVVLHK  241 (668)
T ss_pred             HHHHHhc
Confidence            7666543

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=99.96  E-value=2.3e-28  Score=191.33  Aligned_cols=171  Identities=18%  Similarity=0.111  Sum_probs=134.4

Q ss_pred             CCCCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC----
Q 025755            1 MSGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA----   76 (248)
Q Consensus         1 m~~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~----   76 (248)
                      |..+++|.++|||||+|||.+++++|+++|++|++..|+.+.. +....++..  ..+..+..|++|.++++++++    
T Consensus         1 m~~~~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL-~~la~~~~~--~~~~~~~~DVtD~~~~~~~i~~~~~   77 (246)
T COG4221           1 MTTLKGKVALITGASSGIGEATARALAEAGAKVVLAARREERL-EALADEIGA--GAALALALDVTDRAAVEAAIEALPE   77 (246)
T ss_pred             CCCCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHH-HHHHHhhcc--CceEEEeeccCCHHHHHHHHHHHHH
Confidence            6678899999999999999999999999999999999987432 222222222  578899999999998766654    


Q ss_pred             ---CCCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHH----hcCCCEEEEEeccceeccCCCCCCCCccC
Q 025755           77 ---GCTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCV----KAKVKRVVVVSSIGAVMLNPNWPKGQVMD  145 (248)
Q Consensus        77 ---~id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~----~~~~~~iV~vSS~~~~~~~~~~~~~~~~~  145 (248)
                         ++|++|||||.......    .++|..++++|+.|..+..++..    +.+.+.||++||.++.++.+....     
T Consensus        78 ~~g~iDiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~~~y~~~~v-----  152 (246)
T COG4221          78 EFGRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGRYPYPGGAV-----  152 (246)
T ss_pred             hhCcccEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEeccccccccCCCCcc-----
Confidence               68999999998876422    35678899999999777666654    456789999999998888776433     


Q ss_pred             CCCCCchhhhccccchHHHHHH----HHHHHHHHHHHhCCccEEEEccCeeecCC
Q 025755          146 EECWSDEEFCKATENYYCLAKT----IAEIQALEYAKRGELDIVTVCPSIVIGPM  196 (248)
Q Consensus       146 e~~~~~~~~~~~~~~~Y~~sK~----~~e~l~~~~~~~~~i~v~~vrpg~i~g~~  196 (248)
                                      |+.+|+    +++.|..++..+ ++||+.|.||.+-+..
T Consensus       153 ----------------Y~ATK~aV~~fs~~LR~e~~g~-~IRVt~I~PG~v~~~~  190 (246)
T COG4221         153 ----------------YGATKAAVRAFSLGLRQELAGT-GIRVTVISPGLVETTE  190 (246)
T ss_pred             ----------------chhhHHHHHHHHHHHHHHhcCC-CeeEEEecCceeccee
Confidence                            999996    555555555544 5999999999996653

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=99.96  E-value=2.8e-28  Score=198.51  Aligned_cols=211  Identities=15%  Similarity=0.114  Sum_probs=154.2

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC------
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA------   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~------   76 (248)
                      ++++|+++||||+|+||++++++|+++|++|++++|+..+   ...+.+.....++.++.+|++|.+++..+++      
T Consensus         2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~---~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   78 (248)
T TIGR01832         2 SLEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPS---ETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEF   78 (248)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHH---HHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            4789999999999999999999999999999999986522   1222222234578899999999999887664      


Q ss_pred             -CCCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHHhc----C-CCEEEEEeccceeccCCCCCCCCccCC
Q 025755           77 -GCTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCVKA----K-VKRVVVVSSIGAVMLNPNWPKGQVMDE  146 (248)
Q Consensus        77 -~id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~~~----~-~~~iV~vSS~~~~~~~~~~~~~~~~~e  146 (248)
                       ++|++|||||.......    .+.+++.+++|+.++.++++++.+.    + .++||++||..++.+.+....      
T Consensus        79 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~------  152 (248)
T TIGR01832        79 GHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGGIRVPS------  152 (248)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCCCCCch------
Confidence             48999999998654322    2345678899999999998887642    3 579999999776654433222      


Q ss_pred             CCCCchhhhccccchHHHHHHHHHHHHHHHHHhC---CccEEEEccCeeecCCCCCCCCc--c-HHHHHHHHcCC-----
Q 025755          147 ECWSDEEFCKATENYYCLAKTIAEIQALEYAKRG---ELDIVTVCPSIVIGPMLQPTINT--S-SLLLLGFLKGF-----  215 (248)
Q Consensus       147 ~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~---~i~v~~vrpg~i~g~~~~~~~~~--~-~~~~~~~~~~~-----  215 (248)
                                     |+.+|++.+.+++.++.+.   |+++++++||.+.+++.......  . .....+...++     
T Consensus       153 ---------------Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (248)
T TIGR01832       153 ---------------YTASKHGVAGLTKLLANEWAAKGINVNAIAPGYMATNNTQALRADEDRNAAILERIPAGRWGTPD  217 (248)
T ss_pred             ---------------hHHHHHHHHHHHHHHHHHhCccCcEEEEEEECcCcCcchhccccChHHHHHHHhcCCCCCCcCHH
Confidence                           9999988777777776653   69999999999999864321100  0 01111111111     


Q ss_pred             -------CCCCCCCchhhhhhhhhcccee
Q 025755          216 -------FFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       216 -------~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                             ++.++...+++|+++.+|||..
T Consensus       218 dva~~~~~l~s~~~~~~~G~~i~~dgg~~  246 (248)
T TIGR01832       218 DIGGPAVFLASSASDYVNGYTLAVDGGWL  246 (248)
T ss_pred             HHHHHHHHHcCccccCcCCcEEEeCCCEe
Confidence                   6667778899999999999964

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK08643 acetoin reductase; Validated

Probab=99.96  E-value=2.5e-28  Score=199.75  Aligned_cols=210  Identities=20%  Similarity=0.218  Sum_probs=150.6

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-------CC
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-------GC   78 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-------~i   78 (248)
                      +|+++||||+|+||+++++.|+++|++|++++|+.... ......+.....++.++++|++|+++++++++       ++
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   80 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETA-QAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDL   80 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            68999999999999999999999999999999986422 22222333334568889999999998887765       58


Q ss_pred             CEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHHhc----C-CCEEEEEeccceeccCCCCCCCCccCCCCC
Q 025755           79 TGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCVKA----K-VKRVVVVSSIGAVMLNPNWPKGQVMDEECW  149 (248)
Q Consensus        79 d~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~~~----~-~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~  149 (248)
                      |+||||||.......    .+.+...+++|+.++..+++.+.+.    + .++||++||..+.++.+....         
T Consensus        81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~---------  151 (256)
T PRK08643         81 NVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVGNPELAV---------  151 (256)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccCCCCCch---------
Confidence            999999997543322    2334668899999988777776542    2 369999999877766554333         


Q ss_pred             CchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCC----------Cc--cHHHHHHHHcC
Q 025755          150 SDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTI----------NT--SSLLLLGFLKG  214 (248)
Q Consensus       150 ~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~----------~~--~~~~~~~~~~~  214 (248)
                                  |+.+|++.+.+++.++.+   .|++|++|+||.+.+|+.....          ..  ...+..+...+
T Consensus       152 ------------Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (256)
T PRK08643        152 ------------YSSTKFAVRGLTQTAARDLASEGITVNAYAPGIVKTPMMFDIAHQVGENAGKPDEWGMEQFAKDITLG  219 (256)
T ss_pred             ------------hHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcChhhhHHHhhhccccCCCchHHHHHHhccCCCC
Confidence                        999998666665555542   3699999999999998643110          00  00111111111


Q ss_pred             C------------CCCCCCCchhhhhhhhhcccee
Q 025755          215 F------------FFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       215 ~------------~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                      +            ++.++...+++|+++.+|||..
T Consensus       220 ~~~~~~~va~~~~~L~~~~~~~~~G~~i~vdgg~~  254 (256)
T PRK08643        220 RLSEPEDVANCVSFLAGPDSDYITGQTIIVDGGMV  254 (256)
T ss_pred             CCcCHHHHHHHHHHHhCccccCccCcEEEeCCCee
Confidence            1            6777888999999999999975

>PRK07035 short chain dehydrogenase; Provisional

Probab=99.96  E-value=4.5e-28  Score=197.82  Aligned_cols=213  Identities=16%  Similarity=0.094  Sum_probs=154.5

Q ss_pred             CCCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-----
Q 025755            2 SGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-----   76 (248)
Q Consensus         2 ~~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-----   76 (248)
                      +++++|+++||||+|+||+++++.|+++|++|++++|+... .....+.+.....++.++++|+.|.++++.+++     
T Consensus         4 ~~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   82 (252)
T PRK07035          4 FDLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDG-CQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRER   82 (252)
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            45788999999999999999999999999999999997632 223333333334567889999999998877665     


Q ss_pred             --CCCEEEEccccCCCC-----CCCCccccchhhhHHHHHHHHHHHH----hcCCCEEEEEeccceeccCCCCCCCCccC
Q 025755           77 --GCTGVFHVACPVPVG-----KVPNPEVQLIDPAVVGTKNVLNSCV----KAKVKRVVVVSSIGAVMLNPNWPKGQVMD  145 (248)
Q Consensus        77 --~id~vi~~ag~~~~~-----~~~~~~~~~~~~n~~g~~~~~~~~~----~~~~~~iV~vSS~~~~~~~~~~~~~~~~~  145 (248)
                        .+|+|||+||..+..     ...+.++..+++|+.++..+++++.    +.+.++||++||..+..+.+.+..     
T Consensus        83 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~-----  157 (252)
T PRK07035         83 HGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVSPGDFQGI-----  157 (252)
T ss_pred             cCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhcCCCCCCcc-----
Confidence              489999999964321     1123345688999999888777764    445689999999776655443333     


Q ss_pred             CCCCCchhhhccccchHHHHHHHHHHHHHHHHHhC---CccEEEEccCeeecCCCCCCCCccHHHHHHHHc----CC---
Q 025755          146 EECWSDEEFCKATENYYCLAKTIAEIQALEYAKRG---ELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLK----GF---  215 (248)
Q Consensus       146 e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~---~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~----~~---  215 (248)
                                      |+.||++.+.+++.++.++   |+++++++||.+.+++....... .........    ++   
T Consensus       158 ----------------Y~~sK~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~  220 (252)
T PRK07035        158 ----------------YSITKAAVISMTKAFAKECAPFGIRVNALLPGLTDTKFASALFKN-DAILKQALAHIPLRRHAE  220 (252)
T ss_pred             ----------------hHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeccccCcccccccCC-HHHHHHHHccCCCCCcCC
Confidence                            9999988777777776543   69999999999999864322111 111111111    11   


Q ss_pred             ---------CCCCCCCchhhhhhhhhcccee
Q 025755          216 ---------FFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       216 ---------~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                               ++.++...+++|+++.+|||..
T Consensus       221 ~~~va~~~~~l~~~~~~~~~g~~~~~dgg~~  251 (252)
T PRK07035        221 PSEMAGAVLYLASDASSYTTGECLNVDGGYL  251 (252)
T ss_pred             HHHHHHHHHHHhCccccCccCCEEEeCCCcC
Confidence                     6677778899999999999965

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=99.96  E-value=1.8e-28  Score=206.15  Aligned_cols=226  Identities=21%  Similarity=0.206  Sum_probs=165.2

Q ss_pred             EEEEEcCccHHHHHHHHHHHHCC--CeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCC--CCEEEE
Q 025755            8 RVCVTGAGGYIASWLVKYLLLKG--YMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAG--CTGVFH   83 (248)
Q Consensus         8 ~vlVtG~~g~iG~~~~~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~--id~vi~   83 (248)
                      +|+||||+|+||++++++|+++|  ++|++++|............+.. ..++.++.+|++|.+++.+++++  +|+|||
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~   79 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLED-NPRYRFVKGDIGDRELVSRLFTEHQPDAVVH   79 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhcc-CCCcEEEEcCCcCHHHHHHHHhhcCCCEEEE
Confidence            58999999999999999999987  78988876432111111222211 24688899999999999999987  899999


Q ss_pred             ccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCC-CEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccccchH
Q 025755           84 VACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKV-KRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYY  162 (248)
Q Consensus        84 ~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~-~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y  162 (248)
                      +|+........+.+..++++|+.++.++++++.+.+. .++|++||.. +++...  ...+++|+.+..+      .+.|
T Consensus        80 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~-v~g~~~--~~~~~~e~~~~~~------~~~Y  150 (317)
T TIGR01181        80 FAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEFRFHHISTDE-VYGDLE--KGDAFTETTPLAP------SSPY  150 (317)
T ss_pred             cccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEeeccc-eeCCCC--CCCCcCCCCCCCC------CCch
Confidence            9997654433345567899999999999999998744 3899999966 444321  1225666665443      3559


Q ss_pred             HHHHHHHHHHHHHHHHhCCccEEEEccCeeecCCCCCCCCccHHHHHHHHcCCCCCCCCCchhhhhhhhhccceeEEEee
Q 025755          163 CLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKGFFFTTPSHSYMLERTLVLNQGVRLYRCK  242 (248)
Q Consensus       163 ~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~l~vd~g~~~~~~~  242 (248)
                      +.+|..+|.++..++.+.+++++++||+.+|||..... ...+.++..+..+..+....++....+.+++|+...++..+
T Consensus       151 ~~sK~~~e~~~~~~~~~~~~~~~i~R~~~i~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~~~~~  229 (317)
T TIGR01181       151 SASKAASDHLVRAYHRTYGLPALITRCSNNYGPYQFPE-KLIPLMITNALAGKPLPVYGDGQQVRDWLYVEDHCRAIYLV  229 (317)
T ss_pred             HHHHHHHHHHHHHHHHHhCCCeEEEEeccccCCCCCcc-cHHHHHHHHHhcCCCceEeCCCceEEeeEEHHHHHHHHHHH
Confidence            99999999999999888889999999999999976532 34556677777776544434443344678888876665544


Q ss_pred             cc
Q 025755          243 IQ  244 (248)
Q Consensus       243 ~~  244 (248)
                      ++
T Consensus       230 ~~  231 (317)
T TIGR01181       230 LE  231 (317)
T ss_pred             Hc
Confidence            43

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=99.96  E-value=8.6e-28  Score=196.77  Aligned_cols=220  Identities=16%  Similarity=0.124  Sum_probs=156.0

Q ss_pred             CCCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhh--hhcCCCCCeEEEEccCCCHHHHHHHh----
Q 025755            2 SGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLK--KLEGASENLQLFKTDLLDYEALCAAT----   75 (248)
Q Consensus         2 ~~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~--~~~~~~~~~~~~~~Di~d~~~~~~~~----   75 (248)
                      ..|++|+++|||+++|||+++|++|++.|++|++.+|+.+........  ......+++..+.+|+++.++.++++    
T Consensus         4 ~~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~   83 (270)
T KOG0725|consen    4 GRLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAV   83 (270)
T ss_pred             ccCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHH
Confidence            458999999999999999999999999999999999988543222211  11222456899999999887766654    


Q ss_pred             ----CCCCEEEEccccCCCCC-----CCCccccchhhhHHH-HHHHHHHHHh----cCCCEEEEEeccceeccCCCCCCC
Q 025755           76 ----AGCTGVFHVACPVPVGK-----VPNPEVQLIDPAVVG-TKNVLNSCVK----AKVKRVVVVSSIGAVMLNPNWPKG  141 (248)
Q Consensus        76 ----~~id~vi~~ag~~~~~~-----~~~~~~~~~~~n~~g-~~~~~~~~~~----~~~~~iV~vSS~~~~~~~~~~~~~  141 (248)
                          .++|++|||||......     ..+.|+..+++|+.| ...+.+++.+    .+.+.|+++||..+..+.....  
T Consensus        84 ~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~~~~~~~--  161 (270)
T KOG0725|consen   84 EKFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVGPGPGSG--  161 (270)
T ss_pred             HHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEeccccccCCCCCc--
Confidence                36999999999876431     235567889999996 4555544433    3668999999977665543321  


Q ss_pred             CccCCCCCCchhhhccccchHHHHHH----HHHHHHHHHHHhCCccEEEEccCeeecCCCCCC-CC-ccHHHHHH-----
Q 025755          142 QVMDEECWSDEEFCKATENYYCLAKT----IAEIQALEYAKRGELDIVTVCPSIVIGPMLQPT-IN-TSSLLLLG-----  210 (248)
Q Consensus       142 ~~~~e~~~~~~~~~~~~~~~Y~~sK~----~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~-~~-~~~~~~~~-----  210 (248)
                                        .+|+.+|+    +++.++.++++++ +|||+|.||.+.++..... .. ....+.+.     
T Consensus       162 ------------------~~Y~~sK~al~~ltr~lA~El~~~g-IRvN~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~  222 (270)
T KOG0725|consen  162 ------------------VAYGVSKAALLQLTRSLAKELAKHG-IRVNSVSPGLVKTSLRAAGLDDGEMEEFKEATDSKG  222 (270)
T ss_pred             ------------------ccchhHHHHHHHHHHHHHHHHhhcC-cEEEEeecCcEeCCccccccccchhhHHhhhhcccc
Confidence                              12999995    6666677777654 9999999999999972111 11 11122111     


Q ss_pred             -HHcCC------------CCCCCCCchhhhhhhhhccceeEEEee
Q 025755          211 -FLKGF------------FFTTPSHSYMLERTLVLNQGVRLYRCK  242 (248)
Q Consensus       211 -~~~~~------------~l~~~~~~~~~g~~l~vd~g~~~~~~~  242 (248)
                       ...|+            |+.++...|++|+.+.+|||..+...+
T Consensus       223 ~~p~gr~g~~~eva~~~~fla~~~asyitG~~i~vdgG~~~~~~~  267 (270)
T KOG0725|consen  223 AVPLGRVGTPEEVAEAAAFLASDDASYITGQTIIVDGGFTVVGPS  267 (270)
T ss_pred             ccccCCccCHHHHHHhHHhhcCcccccccCCEEEEeCCEEeeccc
Confidence             01122            788888779999999999999876544

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.96  E-value=3.9e-28  Score=198.13  Aligned_cols=210  Identities=17%  Similarity=0.104  Sum_probs=149.1

Q ss_pred             CCCCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCC---
Q 025755            1 MSGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAG---   77 (248)
Q Consensus         1 m~~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~---   77 (248)
                      |+ +++|+++||||+|+||+++++.|+++|++|++..++..+.........   ..++.++++|++|.+++++++++   
T Consensus         1 ~~-l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~   76 (253)
T PRK08642          1 MQ-ISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADEL---GDRAIALQADVTDREQVQAMFATATE   76 (253)
T ss_pred             CC-CCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHh---CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            44 788999999999999999999999999999987665432222222211   24688999999999988887753   


Q ss_pred             -----CCEEEEccccCCC------C----CCCCccccchhhhHHHHHHHHHHHHh----cCCCEEEEEeccceeccCCCC
Q 025755           78 -----CTGVFHVACPVPV------G----KVPNPEVQLIDPAVVGTKNVLNSCVK----AKVKRVVVVSSIGAVMLNPNW  138 (248)
Q Consensus        78 -----id~vi~~ag~~~~------~----~~~~~~~~~~~~n~~g~~~~~~~~~~----~~~~~iV~vSS~~~~~~~~~~  138 (248)
                           +|++|||||....      .    ...+.+.+.+++|+.++.++++++.+    .+.++||++||.....+... 
T Consensus        77 ~~g~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~-  155 (253)
T PRK08642         77 HFGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLFQNPVVP-  155 (253)
T ss_pred             HhCCCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCCC-
Confidence                 8999999986311      0    01233456799999999999988864    35579999998543222111 


Q ss_pred             CCCCccCCCCCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCCCccHHHHHHHHc--
Q 025755          139 PKGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLK--  213 (248)
Q Consensus       139 ~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~--  213 (248)
                                          ...|+.||++.+.+++.++.+   .++++++|+||.+.++.....  ...........  
T Consensus       156 --------------------~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~~~--~~~~~~~~~~~~~  213 (253)
T PRK08642        156 --------------------YHDYTTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTTDASAA--TPDEVFDLIAATT  213 (253)
T ss_pred             --------------------ccchHHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCchhhcc--CCHHHHHHHHhcC
Confidence                                223999999888888888765   369999999999998753321  11111111110  


Q ss_pred             --CC------------CCCCCCCchhhhhhhhhcccee
Q 025755          214 --GF------------FFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       214 --~~------------~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                        ++            ++..+...+++|+.+.+|||..
T Consensus       214 ~~~~~~~~~~va~~~~~l~~~~~~~~~G~~~~vdgg~~  251 (253)
T PRK08642        214 PLRKVTTPQEFADAVLFFASPWARAVTGQNLVVDGGLV  251 (253)
T ss_pred             CcCCCCCHHHHHHHHHHHcCchhcCccCCEEEeCCCee
Confidence              11            6777778899999999999964

>PRK08226 short chain dehydrogenase; Provisional

Probab=99.96  E-value=5.9e-28  Score=198.33  Aligned_cols=215  Identities=20%  Similarity=0.202  Sum_probs=154.9

Q ss_pred             CCCCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC----
Q 025755            1 MSGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA----   76 (248)
Q Consensus         1 m~~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~----   76 (248)
                      |+.+++|+++||||+|+||+++++.|+++|++|++++|+..  .....+.+.....++.++++|++|.++++++++    
T Consensus         1 ~~~~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~--~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   78 (263)
T PRK08226          1 MGKLTGKTALITGALQGIGEGIARVFARHGANLILLDISPE--IEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKE   78 (263)
T ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHH--HHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHH
Confidence            66788999999999999999999999999999999998753  222223333334578899999999999888765    


Q ss_pred             ---CCCEEEEccccCCCCCCC----CccccchhhhHHHHHHHHHHHHh----cCCCEEEEEecccee-ccCCCCCCCCcc
Q 025755           77 ---GCTGVFHVACPVPVGKVP----NPEVQLIDPAVVGTKNVLNSCVK----AKVKRVVVVSSIGAV-MLNPNWPKGQVM  144 (248)
Q Consensus        77 ---~id~vi~~ag~~~~~~~~----~~~~~~~~~n~~g~~~~~~~~~~----~~~~~iV~vSS~~~~-~~~~~~~~~~~~  144 (248)
                         .+|+||||||........    +.++..+++|+.++.++++++.+    .+.++||++||..+. .+.+.+      
T Consensus        79 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~------  152 (263)
T PRK08226         79 KEGRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVADPGE------  152 (263)
T ss_pred             HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhcccCCCCc------
Confidence               579999999976543222    23455789999999998888764    345799999996542 222222      


Q ss_pred             CCCCCCchhhhccccchHHHHHHHHHHHHHHHHHhC---CccEEEEccCeeecCCCCCC-----CCccHHHHHHHHcC--
Q 025755          145 DEECWSDEEFCKATENYYCLAKTIAEIQALEYAKRG---ELDIVTVCPSIVIGPMLQPT-----INTSSLLLLGFLKG--  214 (248)
Q Consensus       145 ~e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~---~i~v~~vrpg~i~g~~~~~~-----~~~~~~~~~~~~~~--  214 (248)
                                     ..|+.+|.+.+.+++.++.+.   +++|++++||.+.+++....     ..........+..+  
T Consensus       153 ---------------~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p  217 (263)
T PRK08226        153 ---------------TAYALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIP  217 (263)
T ss_pred             ---------------chHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccCHHHHhhhhhccCCCcHHHHHHHhccCC
Confidence                           239999987776666666432   69999999999999864321     01112222222211  


Q ss_pred             --------------CCCCCCCCchhhhhhhhhccceeE
Q 025755          215 --------------FFFTTPSHSYMLERTLVLNQGVRL  238 (248)
Q Consensus       215 --------------~~l~~~~~~~~~g~~l~vd~g~~~  238 (248)
                                    .++.++.+.|++|+++.+|||...
T Consensus       218 ~~~~~~~~~va~~~~~l~~~~~~~~~g~~i~~dgg~~~  255 (263)
T PRK08226        218 LRRLADPLEVGELAAFLASDESSYLTGTQNVIDGGSTL  255 (263)
T ss_pred             CCCCCCHHHHHHHHHHHcCchhcCCcCceEeECCCccc
Confidence                          166777788999999999999654

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.96  E-value=3.1e-28  Score=199.70  Aligned_cols=215  Identities=20%  Similarity=0.143  Sum_probs=151.9

Q ss_pred             CCCCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC----
Q 025755            1 MSGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA----   76 (248)
Q Consensus         1 m~~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~----   76 (248)
                      |..+++|+++||||+|+||+++++.|+++|++|++++|+... .....+.+.....++.++++|++|.+++..+++    
T Consensus         2 ~~~~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   80 (262)
T PRK13394          2 MSNLNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDG-ANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAE   80 (262)
T ss_pred             cccCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHH-HHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHH
Confidence            334778999999999999999999999999999999998742 223333343334568889999999998887765    


Q ss_pred             ---CCCEEEEccccCCCCCC----CCccccchhhhHHH----HHHHHHHH-HhcCCCEEEEEeccceeccCCCCCCCCcc
Q 025755           77 ---GCTGVFHVACPVPVGKV----PNPEVQLIDPAVVG----TKNVLNSC-VKAKVKRVVVVSSIGAVMLNPNWPKGQVM  144 (248)
Q Consensus        77 ---~id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g----~~~~~~~~-~~~~~~~iV~vSS~~~~~~~~~~~~~~~~  144 (248)
                         .+|+||||||.......    .+.+..++++|+.+    +.++++.+ ++.+.++||++||..+..+.+..      
T Consensus        81 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~~~~~~~~------  154 (262)
T PRK13394         81 RFGSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEASPLK------  154 (262)
T ss_pred             HcCCCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhhcCCCCCC------
Confidence               38999999997654321    23345678899999    55666666 55677899999997655443322      


Q ss_pred             CCCCCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCCC--------ccHHHHHHHHc
Q 025755          145 DEECWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTIN--------TSSLLLLGFLK  213 (248)
Q Consensus       145 ~e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~~--------~~~~~~~~~~~  213 (248)
                                     ..|+.+|...+.+++.++.+   .++++++++||.+++|.......        ........+..
T Consensus       155 ---------------~~y~~sk~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (262)
T PRK13394        155 ---------------SAYVTAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVML  219 (262)
T ss_pred             ---------------cccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccchhhhhhhHhhhhccCCChHHHHHHHHh
Confidence                           23999998777777776654   36999999999999986432100        01122222221


Q ss_pred             CC-----------------CCCCCCCchhhhhhhhhcccee
Q 025755          214 GF-----------------FFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       214 ~~-----------------~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                      +.                 ++......+++|+.+.+|+|..
T Consensus       220 ~~~~~~~~~~~~dva~a~~~l~~~~~~~~~g~~~~~~~g~~  260 (262)
T PRK13394        220 GKTVDGVFTTVEDVAQTVLFLSSFPSAALTGQSFVVSHGWF  260 (262)
T ss_pred             cCCCCCCCCCHHHHHHHHHHHcCccccCCcCCEEeeCCcee
Confidence            11                 3444445677889999998864

>PRK07791 short chain dehydrogenase; Provisional

Probab=99.96  E-value=3.9e-28  Score=201.86  Aligned_cols=218  Identities=15%  Similarity=0.092  Sum_probs=155.9

Q ss_pred             CCCCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCC--------chhhHHhhhhcCCCCCeEEEEccCCCHHHHH
Q 025755            1 MSGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPC--------DEKNAHLKKLEGASENLQLFKTDLLDYEALC   72 (248)
Q Consensus         1 m~~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~--------~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~   72 (248)
                      |..+++|+++||||++|||+++++.|+++|++|++++|+..        +......+.+.....++.++.+|++|.+++.
T Consensus         1 m~~l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~   80 (286)
T PRK07791          1 MGLLDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAA   80 (286)
T ss_pred             CCccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHH
Confidence            66688999999999999999999999999999999987641        1122233334333456888999999999888


Q ss_pred             HHhC-------CCCEEEEccccCCCCC----CCCccccchhhhHHHHHHHHHHHHhc----C------CCEEEEEeccce
Q 025755           73 AATA-------GCTGVFHVACPVPVGK----VPNPEVQLIDPAVVGTKNVLNSCVKA----K------VKRVVVVSSIGA  131 (248)
Q Consensus        73 ~~~~-------~id~vi~~ag~~~~~~----~~~~~~~~~~~n~~g~~~~~~~~~~~----~------~~~iV~vSS~~~  131 (248)
                      ++++       ++|++|||||......    ..+.|+.++++|+.++..+++++.+.    .      .++||++||..+
T Consensus        81 ~~~~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~  160 (286)
T PRK07791         81 NLVDAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAG  160 (286)
T ss_pred             HHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhh
Confidence            7764       5799999999765331    12446778999999998888777532    1      269999999887


Q ss_pred             eccCCCCCCCCccCCCCCCchhhhccccchHHHHHH----HHHHHHHHHHHhCCccEEEEccCeeecCCCCCCC------
Q 025755          132 VMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAKT----IAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTI------  201 (248)
Q Consensus       132 ~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~----~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~------  201 (248)
                      ..+.+....                     |+.||+    +++.++.++.++ |||||+|+|| +.+++.....      
T Consensus       161 ~~~~~~~~~---------------------Y~asKaal~~l~~~la~el~~~-gIrVn~v~Pg-~~T~~~~~~~~~~~~~  217 (286)
T PRK07791        161 LQGSVGQGN---------------------YSAAKAGIAALTLVAAAELGRY-GVTVNAIAPA-ARTRMTETVFAEMMAK  217 (286)
T ss_pred             CcCCCCchh---------------------hHHHHHHHHHHHHHHHHHHHHh-CeEEEEECCC-CCCCcchhhHHHHHhc
Confidence            776655444                     999996    455555566554 5999999999 6666532100      


Q ss_pred             -------CccHHHHHHHHcCCCCCCCCCchhhhhhhhhccceeEEEeec
Q 025755          202 -------NTSSLLLLGFLKGFFFTTPSHSYMLERTLVLNQGVRLYRCKI  243 (248)
Q Consensus       202 -------~~~~~~~~~~~~~~~l~~~~~~~~~g~~l~vd~g~~~~~~~~  243 (248)
                             ...+..+.....  ++.++...+++|+++.+|||......-+
T Consensus       218 ~~~~~~~~~~pedva~~~~--~L~s~~~~~itG~~i~vdgG~~~~~~~~  264 (286)
T PRK07791        218 PEEGEFDAMAPENVSPLVV--WLGSAESRDVTGKVFEVEGGKISVAEGW  264 (286)
T ss_pred             CcccccCCCCHHHHHHHHH--HHhCchhcCCCCcEEEEcCCceEEechh
Confidence                   001111111111  6777778999999999999988765443

>PLN02240 UDP-glucose 4-epimerase

Probab=99.96  E-value=4.6e-28  Score=207.04  Aligned_cols=232  Identities=25%  Similarity=0.181  Sum_probs=165.6

Q ss_pred             CCCCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchh--hHHhhhhc-CCCCCeEEEEccCCCHHHHHHHhC-
Q 025755            1 MSGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEK--NAHLKKLE-GASENLQLFKTDLLDYEALCAATA-   76 (248)
Q Consensus         1 m~~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~--~~~~~~~~-~~~~~~~~~~~Di~d~~~~~~~~~-   76 (248)
                      |+ |++|+|+||||+|+||+++++.|+++|++|++++|......  ........ ....++.++.+|++|.+++..+++ 
T Consensus         1 ~~-~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~   79 (352)
T PLN02240          1 MS-LMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFAS   79 (352)
T ss_pred             CC-CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHh
Confidence            44 78899999999999999999999999999999987542211  11112111 113468899999999999999886 


Q ss_pred             -CCCEEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhh
Q 025755           77 -GCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFC  155 (248)
Q Consensus        77 -~id~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~  155 (248)
                       ++|+|||+|+..........+..++++|+.++.++++++++.+.+++|++||.. +|+...   ..+++|+.+..+   
T Consensus        80 ~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~-vyg~~~---~~~~~E~~~~~~---  152 (352)
T PLN02240         80 TRFDAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKHGCKKLVFSSSAT-VYGQPE---EVPCTEEFPLSA---  152 (352)
T ss_pred             CCCCEEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHH-HhCCCC---CCCCCCCCCCCC---
Confidence             689999999975443333455678999999999999999998889999999964 555432   456778766554   


Q ss_pred             ccccchHHHHHHHHHHHHHHHHHh-CCccEEEEccCeeecCCCCC------C--CCccHHHHHHHHcCCC--CCCC----
Q 025755          156 KATENYYCLAKTIAEIQALEYAKR-GELDIVTVCPSIVIGPMLQP------T--INTSSLLLLGFLKGFF--FTTP----  220 (248)
Q Consensus       156 ~~~~~~Y~~sK~~~e~l~~~~~~~-~~i~v~~vrpg~i~g~~~~~------~--~~~~~~~~~~~~~~~~--l~~~----  220 (248)
                         .+.|+.||.++|.+++.++.. .+++++++|++++||+....      .  ......++.++..++.  +...    
T Consensus       153 ---~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~R~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  229 (352)
T PLN02240        153 ---TNPYGRTKLFIEEICRDIHASDPEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMPYVQQVAVGRRPELTVFGNDY  229 (352)
T ss_pred             ---CCHHHHHHHHHHHHHHHHHHhcCCCCEEEEeecCcCCCCccccccCCCCCCcchHHHHHHHHHhCCCCceEEeCCCC
Confidence               456999999999999998754 47999999999999975321      0  1122234455544432  1111    


Q ss_pred             --CCchhhhhhhhhccceeEEEeec
Q 025755          221 --SHSYMLERTLVLNQGVRLYRCKI  243 (248)
Q Consensus       221 --~~~~~~g~~l~vd~g~~~~~~~~  243 (248)
                        .++....+.++++|...++..++
T Consensus       230 ~~~~g~~~~~~i~v~D~a~a~~~a~  254 (352)
T PLN02240        230 PTKDGTGVRDYIHVMDLADGHIAAL  254 (352)
T ss_pred             CCCCCCEEEeeEEHHHHHHHHHHHH
Confidence              13344456788888776554444

>PRK06500 short chain dehydrogenase; Provisional

Probab=99.96  E-value=4.6e-28  Score=197.22  Aligned_cols=212  Identities=18%  Similarity=0.176  Sum_probs=154.2

Q ss_pred             CCCCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC----
Q 025755            1 MSGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA----   76 (248)
Q Consensus         1 m~~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~----   76 (248)
                      |..+++|+++||||+|+||++++++|+++|++|++++|+... .....+.+   ..++.++++|++|.+++..+++    
T Consensus         1 m~~~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~-~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~   76 (249)
T PRK06500          1 MSRLQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPAS-LEAARAEL---GESALVIRADAGDVAAQKALAQALAE   76 (249)
T ss_pred             CCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHH-HHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHH
Confidence            666788999999999999999999999999999999987532 12222222   3467889999999887766543    


Q ss_pred             ---CCCEEEEccccCCCCC----CCCccccchhhhHHHHHHHHHHHHhc--CCCEEEEEeccceeccCCCCCCCCccCCC
Q 025755           77 ---GCTGVFHVACPVPVGK----VPNPEVQLIDPAVVGTKNVLNSCVKA--KVKRVVVVSSIGAVMLNPNWPKGQVMDEE  147 (248)
Q Consensus        77 ---~id~vi~~ag~~~~~~----~~~~~~~~~~~n~~g~~~~~~~~~~~--~~~~iV~vSS~~~~~~~~~~~~~~~~~e~  147 (248)
                         ++|+||||||......    ..+.++.++++|+.++.++++++.+.  ..+++|++||..+.++.+..         
T Consensus        77 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~S~~~~~~~~~~---------  147 (249)
T PRK06500         77 AFGRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLNGSINAHIGMPNS---------  147 (249)
T ss_pred             HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEechHhccCCCCc---------
Confidence               5899999999754332    12445678999999999999999863  34689999987766665432         


Q ss_pred             CCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCC---CCccHHHHHHHHcC-------
Q 025755          148 CWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPT---INTSSLLLLGFLKG-------  214 (248)
Q Consensus       148 ~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~---~~~~~~~~~~~~~~-------  214 (248)
                                  .+|+.+|++.+.+++.++.+   .++++++++||.+++|+....   ........+.+...       
T Consensus       148 ------------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (249)
T PRK06500        148 ------------SVYAASKAALLSLAKTLSGELLPRGIRVNAVSPGPVQTPLYGKLGLPEATLDAVAAQIQALVPLGRFG  215 (249)
T ss_pred             ------------cHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCCCHHHHhhccCccchHHHHHHHHhcCCCCCCc
Confidence                        23999999888888777654   379999999999999864211   11111111111111       


Q ss_pred             ---------CCCCCCCCchhhhhhhhhcccee
Q 025755          215 ---------FFFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       215 ---------~~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                               .++..+...|++|+.+.+|||.+
T Consensus       216 ~~~~va~~~~~l~~~~~~~~~g~~i~~~gg~~  247 (249)
T PRK06500        216 TPEEIAKAVLYLASDESAFIVGSEIIVDGGMS  247 (249)
T ss_pred             CHHHHHHHHHHHcCccccCccCCeEEECCCcc
Confidence                     04556666899999999999964

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=99.96  E-value=3.4e-28  Score=199.12  Aligned_cols=212  Identities=14%  Similarity=0.135  Sum_probs=154.8

Q ss_pred             CCCCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC----
Q 025755            1 MSGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA----   76 (248)
Q Consensus         1 m~~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~----   76 (248)
                      |+.+++|+++||||+|+||+++++.|+++|++|++++|+.... ....+.+   ..++.++++|++|.+++.++++    
T Consensus         1 ~~~l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~-~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~   76 (257)
T PRK07067          1 MMRLQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARA-RLAALEI---GPAAIAVSLDVTRQDSIDRIVAAAVE   76 (257)
T ss_pred             CCCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHH-HHHHHHh---CCceEEEEccCCCHHHHHHHHHHHHH
Confidence            6778899999999999999999999999999999999986422 1222222   2458889999999999888776    


Q ss_pred             ---CCCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHHhc-----CCCEEEEEeccceeccCCCCCCCCcc
Q 025755           77 ---GCTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCVKA-----KVKRVVVVSSIGAVMLNPNWPKGQVM  144 (248)
Q Consensus        77 ---~id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~~~-----~~~~iV~vSS~~~~~~~~~~~~~~~~  144 (248)
                         .+|++|||||.......    .+.+...+++|+.++.++++++.+.     ..++||++||....++.+...     
T Consensus        77 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~-----  151 (257)
T PRK07067         77 RFGGIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRGEALVS-----  151 (257)
T ss_pred             HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCCCCCCCc-----
Confidence               47999999997643221    2345678999999999999998653     136899999977665554333     


Q ss_pred             CCCCCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCCC-------c-cHHHHHHHHc
Q 025755          145 DEECWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTIN-------T-SSLLLLGFLK  213 (248)
Q Consensus       145 ~e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~~-------~-~~~~~~~~~~  213 (248)
                                      .|+.||+..+.+++.++.+   .++++++++||.++|++......       . ..........
T Consensus       152 ----------------~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (257)
T PRK07067        152 ----------------HYCATKAAVISYTQSAALALIRHGINVNAIAPGVVDTPMWDQVDALFARYENRPPGEKKRLVGE  215 (257)
T ss_pred             ----------------hhhhhHHHHHHHHHHHHHHhcccCeEEEEEeeCcccchhhhhhhhhhhhccCCCHHHHHHHHhh
Confidence                            3999998777776666552   47999999999999987432100       0 0111111111


Q ss_pred             C----C------------CCCCCCCchhhhhhhhhcccee
Q 025755          214 G----F------------FFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       214 ~----~------------~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                      +    +            ++.++...+++|+++++|||..
T Consensus       216 ~~~~~~~~~~~dva~~~~~l~s~~~~~~~g~~~~v~gg~~  255 (257)
T PRK07067        216 AVPLGRMGVPDDLTGMALFLASADADYIVAQTYNVDGGNW  255 (257)
T ss_pred             cCCCCCccCHHHHHHHHHHHhCcccccccCcEEeecCCEe
Confidence            1    1            6667778899999999999964

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.96  E-value=2.8e-28  Score=204.89  Aligned_cols=222  Identities=27%  Similarity=0.297  Sum_probs=168.6

Q ss_pred             EEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCC-CEEEEccc
Q 025755            8 RVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGC-TGVFHVAC   86 (248)
Q Consensus         8 ~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~i-d~vi~~ag   86 (248)
                      .||||||+||||+++++.|+++|++|++++|.........        ..+.++.+|++|.+....+++.. |.|||+|+
T Consensus         2 ~ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--------~~~~~~~~d~~~~~~~~~~~~~~~d~vih~aa   73 (314)
T COG0451           2 RILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL--------SGVEFVVLDLTDRDLVDELAKGVPDAVIHLAA   73 (314)
T ss_pred             eEEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc--------cccceeeecccchHHHHHHHhcCCCEEEEccc
Confidence            4999999999999999999999999999999764221110        46788999999998888888888 99999999


Q ss_pred             cCCCCCCCC-ccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCC-CCchhhhccccchHHH
Q 025755           87 PVPVGKVPN-PEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEEC-WSDEEFCKATENYYCL  164 (248)
Q Consensus        87 ~~~~~~~~~-~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~-~~~~~~~~~~~~~Y~~  164 (248)
                      ......... .+..++++|+.++.++++++++.+++++||.||...+++.   ....+++|+. +..|      .++|+.
T Consensus        74 ~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~~~~v~~ss~~~~~~~---~~~~~~~E~~~~~~p------~~~Yg~  144 (314)
T COG0451          74 QSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAGVKRFVFASSVSVVYGD---PPPLPIDEDLGPPRP------LNPYGV  144 (314)
T ss_pred             cCchhhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCceECCC---CCCCCcccccCCCCC------CCHHHH
Confidence            876543222 2346899999999999999999999999996665544443   1234677773 3333      336999


Q ss_pred             HHHHHHHHHHHHHHhCCccEEEEccCeeecCCCCCCC--CccHHHHHHHHcCCC-CCCCCCchhhhhhhhhccceeEEEe
Q 025755          165 AKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTI--NTSSLLLLGFLKGFF-FTTPSHSYMLERTLVLNQGVRLYRC  241 (248)
Q Consensus       165 sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~--~~~~~~~~~~~~~~~-l~~~~~~~~~g~~l~vd~g~~~~~~  241 (248)
                      +|.++|.++..+...++++++++||+.+|||......  .....++.+...+.. .....++....+.+++||...++..
T Consensus       145 sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~  224 (314)
T COG0451         145 SKLAAEQLLRAYARLYGLPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADALLL  224 (314)
T ss_pred             HHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCCCCCcCcHHHHHHHHHhCCCcceEeCCCceeEeeEeHHHHHHHHHH
Confidence            9999999999999877899999999999999877641  133344555666654 4444444455677899998777766


Q ss_pred             eccCC
Q 025755          242 KIQIP  246 (248)
Q Consensus       242 ~~~~p  246 (248)
                      +++.+
T Consensus       225 ~~~~~  229 (314)
T COG0451         225 ALENP  229 (314)
T ss_pred             HHhCC
Confidence            66644

>PRK07062 short chain dehydrogenase; Provisional

Probab=99.96  E-value=8.4e-28  Score=197.65  Aligned_cols=213  Identities=18%  Similarity=0.152  Sum_probs=150.1

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCC--CCCeEEEEccCCCHHHHHHHhC----
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGA--SENLQLFKTDLLDYEALCAATA----   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Di~d~~~~~~~~~----   76 (248)
                      ++++|+++||||+++||+++++.|+++|++|++++|+..+.. ...+.+...  ..++.++.+|++|.++++++++    
T Consensus         5 ~l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   83 (265)
T PRK07062          5 QLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLA-SAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEA   83 (265)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHH-HHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHH
Confidence            367899999999999999999999999999999999864322 222222222  2367889999999998877664    


Q ss_pred             ---CCCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHHh----cCCCEEEEEeccceeccCCCCCCCCccC
Q 025755           77 ---GCTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCVK----AKVKRVVVVSSIGAVMLNPNWPKGQVMD  145 (248)
Q Consensus        77 ---~id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~~----~~~~~iV~vSS~~~~~~~~~~~~~~~~~  145 (248)
                         .+|+||||||.......    .+.|...+++|+.+...+++.+.+    .+.++||++||..+..+.+....     
T Consensus        84 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~-----  158 (265)
T PRK07062         84 RFGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLALQPEPHMVA-----  158 (265)
T ss_pred             hcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEeccccccCCCCCchH-----
Confidence               47999999997543221    234567889999987777666544    45689999999876655544333     


Q ss_pred             CCCCCchhhhccccchHHHHHH----HHHHHHHHHHHhCCccEEEEccCeeecCCCCCCC-------CccHHHHHHHH--
Q 025755          146 EECWSDEEFCKATENYYCLAKT----IAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTI-------NTSSLLLLGFL--  212 (248)
Q Consensus       146 e~~~~~~~~~~~~~~~Y~~sK~----~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~-------~~~~~~~~~~~--  212 (248)
                                      |+.+|+    +++.++.++.++ |+++++|+||.+.+|+.....       ...........  
T Consensus       159 ----------------y~asKaal~~~~~~la~e~~~~-gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (265)
T PRK07062        159 ----------------TSAARAGLLNLVKSLATELAPK-GVRVNSILLGLVESGQWRRRYEARADPGQSWEAWTAALARK  221 (265)
T ss_pred             ----------------hHHHHHHHHHHHHHHHHHhhhc-CeEEEEEecCccccchhhhHHHHhhccCCChHHHHHHHhhc
Confidence                            999996    455555555554 599999999999998643210       00111111110  


Q ss_pred             ----cCC------------CCCCCCCchhhhhhhhhccceeE
Q 025755          213 ----KGF------------FFTTPSHSYMLERTLVLNQGVRL  238 (248)
Q Consensus       213 ----~~~------------~l~~~~~~~~~g~~l~vd~g~~~  238 (248)
                          .++            ++.++...|++|+++.+|||...
T Consensus       222 ~~~p~~r~~~p~~va~~~~~L~s~~~~~~tG~~i~vdgg~~~  263 (265)
T PRK07062        222 KGIPLGRLGRPDEAARALFFLASPLSSYTTGSHIDVSGGFAR  263 (265)
T ss_pred             CCCCcCCCCCHHHHHHHHHHHhCchhcccccceEEEcCceEe
Confidence                011            66677788999999999999653

>PRK05717 oxidoreductase; Validated

Probab=99.96  E-value=7.2e-28  Score=197.00  Aligned_cols=210  Identities=17%  Similarity=0.134  Sum_probs=152.5

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC------
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA------   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~------   76 (248)
                      ++++|+++||||+|+||+++++.|+++|++|++++|+..+.. ...+..   ..++.++++|++|.+++.++++      
T Consensus         7 ~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~-~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   82 (255)
T PRK05717          7 GHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGS-KVAKAL---GENAWFIAMDVADEAQVAAGVAEVLGQF   82 (255)
T ss_pred             ccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHH-HHHHHc---CCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence            478999999999999999999999999999999988753221 211221   3468899999999988766554      


Q ss_pred             -CCCEEEEccccCCCCC------CCCccccchhhhHHHHHHHHHHHHhc---CCCEEEEEeccceeccCCCCCCCCccCC
Q 025755           77 -GCTGVFHVACPVPVGK------VPNPEVQLIDPAVVGTKNVLNSCVKA---KVKRVVVVSSIGAVMLNPNWPKGQVMDE  146 (248)
Q Consensus        77 -~id~vi~~ag~~~~~~------~~~~~~~~~~~n~~g~~~~~~~~~~~---~~~~iV~vSS~~~~~~~~~~~~~~~~~e  146 (248)
                       ++|+||||||......      ..+.++.++++|+.++.++++++.+.   ..++||++||..+..+.+....      
T Consensus        83 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~~~~~~~~~------  156 (255)
T PRK05717         83 GRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRARQSEPDTEA------  156 (255)
T ss_pred             CCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhcCCCCCCcc------
Confidence             4799999999764321      12345678999999999999999753   3479999999877666544333      


Q ss_pred             CCCCchhhhccccchHHHHHHHHHHHHHHHHHhC--CccEEEEccCeeecCCCCCCC-CccHHHH-HHHHcC--------
Q 025755          147 ECWSDEEFCKATENYYCLAKTIAEIQALEYAKRG--ELDIVTVCPSIVIGPMLQPTI-NTSSLLL-LGFLKG--------  214 (248)
Q Consensus       147 ~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~--~i~v~~vrpg~i~g~~~~~~~-~~~~~~~-~~~~~~--------  214 (248)
                                     |+.+|++.+.+++.++.++  ++++++++||++.+++..... ....... .....+        
T Consensus       157 ---------------Y~~sKaa~~~~~~~la~~~~~~i~v~~i~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  221 (255)
T PRK05717        157 ---------------YAASKGGLLALTHALAISLGPEIRVNAVSPGWIDARDPSQRRAEPLSEADHAQHPAGRVGTVEDV  221 (255)
T ss_pred             ---------------hHHHHHHHHHHHHHHHHHhcCCCEEEEEecccCcCCccccccchHHHHHHhhcCCCCCCcCHHHH
Confidence                           9999998888888887654  599999999999998643210 0000000 000001        


Q ss_pred             ----CCCCCCCCchhhhhhhhhcccee
Q 025755          215 ----FFFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       215 ----~~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                          .++......+++|+++.+|||..
T Consensus       222 a~~~~~l~~~~~~~~~g~~~~~~gg~~  248 (255)
T PRK05717        222 AAMVAWLLSRQAGFVTGQEFVVDGGMT  248 (255)
T ss_pred             HHHHHHHcCchhcCccCcEEEECCCce
Confidence                14555556799999999999965

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=99.96  E-value=7.8e-28  Score=197.61  Aligned_cols=211  Identities=17%  Similarity=0.109  Sum_probs=151.4

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC------
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA------   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~------   76 (248)
                      .+++|+++||||+||||++++++|+++|++|++++|+.+.. .. +..  ....++.++++|+.|.+++.++++      
T Consensus         2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~-~~-l~~--~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   77 (262)
T TIGR03325         2 RLKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGL-QE-LEA--AHGDAVVGVEGDVRSLDDHKEAVARCVAAF   77 (262)
T ss_pred             CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH-HH-HHh--hcCCceEEEEeccCCHHHHHHHHHHHHHHh
Confidence            37899999999999999999999999999999999876321 11 111  113468889999999988877664      


Q ss_pred             -CCCEEEEccccCCCC----CCC-----CccccchhhhHHHHHHHHHHHHhc---CCCEEEEEeccceeccCCCCCCCCc
Q 025755           77 -GCTGVFHVACPVPVG----KVP-----NPEVQLIDPAVVGTKNVLNSCVKA---KVKRVVVVSSIGAVMLNPNWPKGQV  143 (248)
Q Consensus        77 -~id~vi~~ag~~~~~----~~~-----~~~~~~~~~n~~g~~~~~~~~~~~---~~~~iV~vSS~~~~~~~~~~~~~~~  143 (248)
                       ++|++|||||.....    ...     +.|...+++|+.++.++++++.+.   ..+++|++||..++.+.+....   
T Consensus        78 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~---  154 (262)
T TIGR03325        78 GKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASRGSVIFTISNAGFYPNGGGPL---  154 (262)
T ss_pred             CCCCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcCCCEEEEeccceecCCCCCch---
Confidence             579999999974321    111     235678999999999999988764   2368999999877765543323   


Q ss_pred             cCCCCCCchhhhccccchHHHHHHHHHHHHHHHHHhC--CccEEEEccCeeecCCCCCC-----CC-----ccHHHHHH-
Q 025755          144 MDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKRG--ELDIVTVCPSIVIGPMLQPT-----IN-----TSSLLLLG-  210 (248)
Q Consensus       144 ~~e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~--~i~v~~vrpg~i~g~~~~~~-----~~-----~~~~~~~~-  210 (248)
                                        |+.||++.+.+.+.++.+.  ++|||+|+||.+.+++....     ..     .......+ 
T Consensus       155 ------------------Y~~sKaa~~~l~~~la~e~~~~irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (262)
T TIGR03325       155 ------------------YTAAKHAVVGLVKELAFELAPYVRVNGVAPGGMSSDLRGPKSLGMADKSISTVPLGDMLKSV  216 (262)
T ss_pred             ------------------hHHHHHHHHHHHHHHHHhhccCeEEEEEecCCCcCCCccccccccccccccccchhhhhhhc
Confidence                              9999987777776666543  39999999999999875421     00     00111111 


Q ss_pred             HHcCC------------CCCCCC-CchhhhhhhhhccceeE
Q 025755          211 FLKGF------------FFTTPS-HSYMLERTLVLNQGVRL  238 (248)
Q Consensus       211 ~~~~~------------~l~~~~-~~~~~g~~l~vd~g~~~  238 (248)
                      ...++            |+.++. ..|++|+++.+|||+.+
T Consensus       217 ~p~~r~~~p~eva~~~~~l~s~~~~~~~tG~~i~vdgg~~~  257 (262)
T TIGR03325       217 LPIGRMPDAEEYTGAYVFFATRGDTVPATGAVLNYDGGMGV  257 (262)
T ss_pred             CCCCCCCChHHhhhheeeeecCCCcccccceEEEecCCeee
Confidence            11111            566654 56899999999999764

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=99.96  E-value=1.1e-28  Score=195.28  Aligned_cols=230  Identities=19%  Similarity=0.212  Sum_probs=184.9

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEE
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFH   83 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~   83 (248)
                      .++++|+||||+||||+++|++|+.+|++|++++--.... +..++ ..-...+++.+.-|+.     ..++.++|.|+|
T Consensus        25 ~~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~-k~n~~-~~~~~~~fel~~hdv~-----~pl~~evD~Iyh   97 (350)
T KOG1429|consen   25 SQNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGR-KENLE-HWIGHPNFELIRHDVV-----EPLLKEVDQIYH   97 (350)
T ss_pred             CCCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccc-hhhcc-hhccCcceeEEEeech-----hHHHHHhhhhhh
Confidence            5679999999999999999999999999999998654321 12111 1112345666666664     457788999999


Q ss_pred             ccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccccchHH
Q 025755           84 VACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYC  163 (248)
Q Consensus        84 ~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~  163 (248)
                      +|+++++......+..++.+|..++.+++..|+..+ +|+++.||+. +||.|.   .-|..|+.+.+-. +..+..+|.
T Consensus        98 LAapasp~~y~~npvktIktN~igtln~lglakrv~-aR~l~aSTse-VYgdp~---~hpq~e~ywg~vn-pigpr~cyd  171 (350)
T KOG1429|consen   98 LAAPASPPHYKYNPVKTIKTNVIGTLNMLGLAKRVG-ARFLLASTSE-VYGDPL---VHPQVETYWGNVN-PIGPRSCYD  171 (350)
T ss_pred             hccCCCCcccccCccceeeecchhhHHHHHHHHHhC-ceEEEeeccc-ccCCcc---cCCCccccccccC-cCCchhhhh
Confidence            999999888777889999999999999999999988 7999999955 787754   4445555553321 223456699


Q ss_pred             HHHHHHHHHHHHHHHhCCccEEEEccCeeecCCCCCC-CCccHHHHHHHHcCCCCCCCCCchhhhhhhhhccceeEEEee
Q 025755          164 LAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPT-INTSSLLLLGFLKGFFFTTPSHSYMLERTLVLNQGVRLYRCK  242 (248)
Q Consensus       164 ~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~g~~l~vd~g~~~~~~~  242 (248)
                      ..|..+|.|+..|.++.|+.+.+.|+.++|||+..-. ......++.+..++..+...+++-.|+...||++.+..++..
T Consensus       172 egKr~aE~L~~~y~k~~giE~rIaRifNtyGPrm~~~dgrvvsnf~~q~lr~epltv~g~G~qtRSF~yvsD~Vegll~L  251 (350)
T KOG1429|consen  172 EGKRVAETLCYAYHKQEGIEVRIARIFNTYGPRMHMDDGRVVSNFIAQALRGEPLTVYGDGKQTRSFQYVSDLVEGLLRL  251 (350)
T ss_pred             HHHHHHHHHHHHhhcccCcEEEEEeeecccCCccccCCChhhHHHHHHHhcCCCeEEEcCCcceEEEEeHHHHHHHHHHH
Confidence            9999999999999999999999999999999987655 346678999999999999999999999999999998877776


Q ss_pred             ccCC
Q 025755          243 IQIP  246 (248)
Q Consensus       243 ~~~p  246 (248)
                      +..+
T Consensus       252 m~s~  255 (350)
T KOG1429|consen  252 MESD  255 (350)
T ss_pred             hcCC
Confidence            6654

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.96  E-value=6.5e-28  Score=199.10  Aligned_cols=211  Identities=11%  Similarity=0.023  Sum_probs=148.5

Q ss_pred             CCCcEEEEEcCc--cHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-----
Q 025755            4 EDKERVCVTGAG--GYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-----   76 (248)
Q Consensus         4 l~~k~vlVtG~~--g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-----   76 (248)
                      |++|+++||||+  +|||+++++.|+++|++|++++|+..  ..+.++.+....+....+++|++|.++++++++     
T Consensus         8 ~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~--~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   85 (272)
T PRK08159          8 MAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDA--LKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKK   85 (272)
T ss_pred             ccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchH--HHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHh
Confidence            568999999997  89999999999999999999887632  112222222222335678999999999888765     


Q ss_pred             --CCCEEEEccccCCCC--------CCCCccccchhhhHHHHHHHHHHHHhc--CCCEEEEEeccceeccCCCCCCCCcc
Q 025755           77 --GCTGVFHVACPVPVG--------KVPNPEVQLIDPAVVGTKNVLNSCVKA--KVKRVVVVSSIGAVMLNPNWPKGQVM  144 (248)
Q Consensus        77 --~id~vi~~ag~~~~~--------~~~~~~~~~~~~n~~g~~~~~~~~~~~--~~~~iV~vSS~~~~~~~~~~~~~~~~  144 (248)
                        .+|++|||||.....        ...+.|...+++|+.++..+++++.+.  +.++||++||..+..+.+.+..    
T Consensus        86 ~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~~p~~~~----  161 (272)
T PRK08159         86 WGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYGAEKVMPHYNV----  161 (272)
T ss_pred             cCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEeccccccCCCcchh----
Confidence              489999999976421        112346778999999999999988765  3479999999765544444333    


Q ss_pred             CCCCCCchhhhccccchHHHHHHH----HHHHHHHHHHhCCccEEEEccCeeecCCCCCCCCc--cHHHHH-HHHcCC--
Q 025755          145 DEECWSDEEFCKATENYYCLAKTI----AEIQALEYAKRGELDIVTVCPSIVIGPMLQPTINT--SSLLLL-GFLKGF--  215 (248)
Q Consensus       145 ~e~~~~~~~~~~~~~~~Y~~sK~~----~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~~--~~~~~~-~~~~~~--  215 (248)
                                       |+.||+.    ++.++.++.++ +|+|++|+||.+.+++.......  ...... +...++  
T Consensus       162 -----------------Y~asKaal~~l~~~la~el~~~-gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~  223 (272)
T PRK08159        162 -----------------MGVAKAALEASVKYLAVDLGPK-NIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPLRRTV  223 (272)
T ss_pred             -----------------hhhHHHHHHHHHHHHHHHhccc-CeEEEEeecCCcCCHHHhcCCcchHHHHHHHhCCcccccC
Confidence                             9999975    55555555543 59999999999998754321110  000000 000011  


Q ss_pred             ----------CCCCCCCchhhhhhhhhccceeE
Q 025755          216 ----------FFTTPSHSYMLERTLVLNQGVRL  238 (248)
Q Consensus       216 ----------~l~~~~~~~~~g~~l~vd~g~~~  238 (248)
                                |+.++.+.|++|+++.+|||+..
T Consensus       224 ~peevA~~~~~L~s~~~~~itG~~i~vdgG~~~  256 (272)
T PRK08159        224 TIEEVGDSALYLLSDLSRGVTGEVHHVDSGYHV  256 (272)
T ss_pred             CHHHHHHHHHHHhCccccCccceEEEECCCcee
Confidence                      77788889999999999999763

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=99.96  E-value=2.2e-28  Score=204.59  Aligned_cols=179  Identities=13%  Similarity=-0.008  Sum_probs=140.2

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC--CCCEEEEc
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA--GCTGVFHV   84 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~--~id~vi~~   84 (248)
                      |+||||||+||||++++++|+++| +|++++|...                  .+.+|++|.+.+.++++  ++|+|||+
T Consensus         1 m~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~------------------~~~~Dl~d~~~~~~~~~~~~~D~Vih~   61 (299)
T PRK09987          1 MNILLFGKTGQVGWELQRALAPLG-NLIALDVHST------------------DYCGDFSNPEGVAETVRKIRPDVIVNA   61 (299)
T ss_pred             CeEEEECCCCHHHHHHHHHhhccC-CEEEeccccc------------------cccCCCCCHHHHHHHHHhcCCCEEEEC
Confidence            479999999999999999999999 7888877531                  24589999999999888  58999999


Q ss_pred             cccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccccchHHH
Q 025755           85 ACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCL  164 (248)
Q Consensus        85 ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~  164 (248)
                      |+..........+...+++|+.++.+++++|++.+. ++||+||.. +|+...   ..|++|+++..|      .+.|+.
T Consensus        62 Aa~~~~~~~~~~~~~~~~~N~~~~~~l~~aa~~~g~-~~v~~Ss~~-Vy~~~~---~~p~~E~~~~~P------~~~Yg~  130 (299)
T PRK09987         62 AAHTAVDKAESEPEFAQLLNATSVEAIAKAANEVGA-WVVHYSTDY-VFPGTG---DIPWQETDATAP------LNVYGE  130 (299)
T ss_pred             CccCCcchhhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEccce-EECCCC---CCCcCCCCCCCC------CCHHHH
Confidence            998765544445566789999999999999999885 899999966 454422   457788776544      456999


Q ss_pred             HHHHHHHHHHHHHHhCCccEEEEccCeeecCCCCCCCCccHHHHHHHHcCCCCCCCCC
Q 025755          165 AKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKGFFFTTPSH  222 (248)
Q Consensus       165 sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~  222 (248)
                      ||..+|.++..+..    +..++||+++|||.+.   .....+++.+..++.+....+
T Consensus       131 sK~~~E~~~~~~~~----~~~ilR~~~vyGp~~~---~~~~~~~~~~~~~~~~~v~~d  181 (299)
T PRK09987        131 TKLAGEKALQEHCA----KHLIFRTSWVYAGKGN---NFAKTMLRLAKEREELSVIND  181 (299)
T ss_pred             HHHHHHHHHHHhCC----CEEEEecceecCCCCC---CHHHHHHHHHhcCCCeEEeCC
Confidence            99999999987653    4699999999999753   345666776666665544433

>PRK06701 short chain dehydrogenase; Provisional

Probab=99.96  E-value=1.4e-27  Score=198.91  Aligned_cols=212  Identities=14%  Similarity=0.119  Sum_probs=155.5

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC------
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA------   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~------   76 (248)
                      .+++|+++||||+|+||+++++.|+++|++|++++|+...........+.....++.++.+|++|.+++..+++      
T Consensus        43 ~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~  122 (290)
T PRK06701         43 KLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVREL  122 (290)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            36789999999999999999999999999999999876432223333333334578899999999998888775      


Q ss_pred             -CCCEEEEccccCCCCC-C----CCccccchhhhHHHHHHHHHHHHhc--CCCEEEEEeccceeccCCCCCCCCccCCCC
Q 025755           77 -GCTGVFHVACPVPVGK-V----PNPEVQLIDPAVVGTKNVLNSCVKA--KVKRVVVVSSIGAVMLNPNWPKGQVMDEEC  148 (248)
Q Consensus        77 -~id~vi~~ag~~~~~~-~----~~~~~~~~~~n~~g~~~~~~~~~~~--~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~  148 (248)
                       ++|+||||||...... .    .+.+...+++|+.++.++++++.+.  ..++||++||..++.+.+....        
T Consensus       123 ~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~~~~~~~~~~--------  194 (290)
T PRK06701        123 GRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSITGYEGNETLID--------  194 (290)
T ss_pred             CCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecccccCCCCCcch--------
Confidence             5799999999754321 1    2334678999999999999998764  3469999999877665544333        


Q ss_pred             CCchhhhccccchHHHHHHHHHHHHHHHHHhC---CccEEEEccCeeecCCCCCCCCccHHHHHHHHc----CC------
Q 025755          149 WSDEEFCKATENYYCLAKTIAEIQALEYAKRG---ELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLK----GF------  215 (248)
Q Consensus       149 ~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~---~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~----~~------  215 (248)
                                   |+.||.+.+.+++.++.++   ++++++|+||.++++......  .......+..    ++      
T Consensus       195 -------------Y~~sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~~~--~~~~~~~~~~~~~~~~~~~~~d  259 (290)
T PRK06701        195 -------------YSATKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPSDF--DEEKVSQFGSNTPMQRPGQPEE  259 (290)
T ss_pred             -------------hHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCccccccc--CHHHHHHHHhcCCcCCCcCHHH
Confidence                         9999987777777776543   699999999999998654321  1111111111    11      


Q ss_pred             ------CCCCCCCchhhhhhhhhcccee
Q 025755          216 ------FFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       216 ------~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                            ++..+...+++|+++.+|||..
T Consensus       260 va~~~~~ll~~~~~~~~G~~i~idgg~~  287 (290)
T PRK06701        260 LAPAYVFLASPDSSYITGQMLHVNGGVI  287 (290)
T ss_pred             HHHHHHHHcCcccCCccCcEEEeCCCcc
Confidence                  5666667899999999999854

>PRK07677 short chain dehydrogenase; Provisional

Probab=99.96  E-value=1.1e-27  Score=195.51  Aligned_cols=211  Identities=15%  Similarity=0.096  Sum_probs=147.4

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-------CC
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-------GC   78 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-------~i   78 (248)
                      +|+++||||+|+||+++++.|+++|++|++++|+.... ....+.+.....++.++++|++|+++++++++       .+
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   79 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKL-EEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRI   79 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCc
Confidence            58999999999999999999999999999999986422 22222233234578899999999998888764       57


Q ss_pred             CEEEEccccCCCCC----CCCccccchhhhHHHHHHHHHHHHhc-----CCCEEEEEeccceeccCCCCCCCCccCCCCC
Q 025755           79 TGVFHVACPVPVGK----VPNPEVQLIDPAVVGTKNVLNSCVKA-----KVKRVVVVSSIGAVMLNPNWPKGQVMDEECW  149 (248)
Q Consensus        79 d~vi~~ag~~~~~~----~~~~~~~~~~~n~~g~~~~~~~~~~~-----~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~  149 (248)
                      |+||||||......    ..+.|..++++|+.++.++++++.+.     ..++||++||..+..+.+....         
T Consensus        80 d~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~---------  150 (252)
T PRK07677         80 DALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDAGPGVIH---------  150 (252)
T ss_pred             cEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhccCCCCCcc---------
Confidence            99999998643221    12345678999999999999988542     2479999999765544433223         


Q ss_pred             CchhhhccccchHHHHHHHHH----HHHHHHHHhCCccEEEEccCeeecCCCCCCCCccHHHHHHHHc----C-------
Q 025755          150 SDEEFCKATENYYCLAKTIAE----IQALEYAKRGELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLK----G-------  214 (248)
Q Consensus       150 ~~~~~~~~~~~~Y~~sK~~~e----~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~----~-------  214 (248)
                                  |+.||.+.+    .++.++.+++|+++++|+||.+.++.............+.+.+    +       
T Consensus       151 ------------Y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~PG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (252)
T PRK07677        151 ------------SAAAKAGVLAMTRTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWESEEAAKRTIQSVPLGRLGTPEE  218 (252)
T ss_pred             ------------hHHHHHHHHHHHHHHHHHhCcccCeEEEEEeecccccccccccccCCHHHHHHHhccCCCCCCCCHHH
Confidence                        999997544    4455555445799999999999864321110001111111111    1       


Q ss_pred             -----CCCCCCCCchhhhhhhhhccceeE
Q 025755          215 -----FFFTTPSHSYMLERTLVLNQGVRL  238 (248)
Q Consensus       215 -----~~l~~~~~~~~~g~~l~vd~g~~~  238 (248)
                           .++..+...+++|+++.+|||...
T Consensus       219 va~~~~~l~~~~~~~~~g~~~~~~gg~~~  247 (252)
T PRK07677        219 IAGLAYFLLSDEAAYINGTCITMDGGQWL  247 (252)
T ss_pred             HHHHHHHHcCccccccCCCEEEECCCeec
Confidence                 156666678999999999999653

>PRK08628 short chain dehydrogenase; Provisional

Probab=99.96  E-value=8.4e-28  Score=196.86  Aligned_cols=215  Identities=18%  Similarity=0.141  Sum_probs=158.0

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC------
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA------   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~------   76 (248)
                      +|++|+++||||+|+||+++++.|+++|++|++++|+.+..  ...+.+.....++.++.+|++|.++++++++      
T Consensus         4 ~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~--~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (258)
T PRK08628          4 NLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD--EFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKF   81 (258)
T ss_pred             CcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH--HHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhc
Confidence            47889999999999999999999999999999999887532  3334444345678999999999999888775      


Q ss_pred             -CCCEEEEccccCCCCCC---CCccccchhhhHHHHHHHHHHHHhc---CCCEEEEEeccceeccCCCCCCCCccCCCCC
Q 025755           77 -GCTGVFHVACPVPVGKV---PNPEVQLIDPAVVGTKNVLNSCVKA---KVKRVVVVSSIGAVMLNPNWPKGQVMDEECW  149 (248)
Q Consensus        77 -~id~vi~~ag~~~~~~~---~~~~~~~~~~n~~g~~~~~~~~~~~---~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~  149 (248)
                       .+|+||||||.......   .+.++..+++|+.++.++.+.+.+.   +.++||++||..+..+.+....         
T Consensus        82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~---------  152 (258)
T PRK08628         82 GRIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKASRGAIVNISSKTALTGQGGTSG---------  152 (258)
T ss_pred             CCCCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEECCHHhccCCCCCch---------
Confidence             57999999996543221   2445678899999999988887642   3479999999877765543333         


Q ss_pred             CchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCC---CccHHHHHHH----HcC-C---
Q 025755          150 SDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTI---NTSSLLLLGF----LKG-F---  215 (248)
Q Consensus       150 ~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~---~~~~~~~~~~----~~~-~---  215 (248)
                                  |+.||+..+.+++.++.+   .+++++.|+||.+++|+.....   ..........    ..+ .   
T Consensus       153 ------------Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (258)
T PRK08628        153 ------------YAAAKGAQLALTREWAVALAKDGVRVNAVIPAEVMTPLYENWIATFDDPEAKLAAITAKIPLGHRMTT  220 (258)
T ss_pred             ------------hHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCHHHHHHhhhccCHHHHHHHHHhcCCccccCCC
Confidence                        999998888888777653   3699999999999998643210   0000111111    101 1   


Q ss_pred             ---------CCCCCCCchhhhhhhhhccceeEEE
Q 025755          216 ---------FFTTPSHSYMLERTLVLNQGVRLYR  240 (248)
Q Consensus       216 ---------~l~~~~~~~~~g~~l~vd~g~~~~~  240 (248)
                               ++..+...+++|+.+.+|||...+.
T Consensus       221 ~~dva~~~~~l~~~~~~~~~g~~~~~~gg~~~~~  254 (258)
T PRK08628        221 AEEIADTAVFLLSERSSHTTGQWLFVDGGYVHLD  254 (258)
T ss_pred             HHHHHHHHHHHhChhhccccCceEEecCCccccc
Confidence                     5666667899999999999986554

>PRK12937 short chain dehydrogenase; Provisional

Probab=99.96  E-value=9e-28  Score=195.05  Aligned_cols=211  Identities=17%  Similarity=0.177  Sum_probs=154.0

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC------
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA------   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~------   76 (248)
                      ++++|+++||||+|+||+++++.|+++|++|+++.|+.........+.+.....++.++.+|++|.++++++++      
T Consensus         2 ~~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   81 (245)
T PRK12937          2 TLSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAF   81 (245)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            37889999999999999999999999999999888765432333333343345678999999999999888876      


Q ss_pred             -CCCEEEEccccCCCCC----CCCccccchhhhHHHHHHHHHHHHhc--CCCEEEEEeccceeccCCCCCCCCccCCCCC
Q 025755           77 -GCTGVFHVACPVPVGK----VPNPEVQLIDPAVVGTKNVLNSCVKA--KVKRVVVVSSIGAVMLNPNWPKGQVMDEECW  149 (248)
Q Consensus        77 -~id~vi~~ag~~~~~~----~~~~~~~~~~~n~~g~~~~~~~~~~~--~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~  149 (248)
                       ++|+||||||......    ..+.+...+++|+.++.++++++.+.  ..++||++||.....+.+...          
T Consensus        82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~----------  151 (245)
T PRK12937         82 GRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSVIALPLPGYG----------  151 (245)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeeccccCCCCCCc----------
Confidence             5899999999754321    12334667899999999999888764  346999999976655444322          


Q ss_pred             CchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCCCccHHHHHHHHcC------------
Q 025755          150 SDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKG------------  214 (248)
Q Consensus       150 ~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~~------------  214 (248)
                                 .|+.+|.+.+.+++.++.+   .++++++++||.+.+++....  ........+...            
T Consensus       152 -----------~Y~~sK~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~~d~  218 (245)
T PRK12937        152 -----------PYAASKAAVEGLVHVLANELRGRGITVNAVAPGPVATELFFNG--KSAEQIDQLAGLAPLERLGTPEEI  218 (245)
T ss_pred             -----------hhHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCccCchhccc--CCHHHHHHHHhcCCCCCCCCHHHH
Confidence                       3999998877777766543   269999999999999873211  111112211111            


Q ss_pred             ----CCCCCCCCchhhhhhhhhccce
Q 025755          215 ----FFFTTPSHSYMLERTLVLNQGV  236 (248)
Q Consensus       215 ----~~l~~~~~~~~~g~~l~vd~g~  236 (248)
                          .++......+++|+++.+|||.
T Consensus       219 a~~~~~l~~~~~~~~~g~~~~~~~g~  244 (245)
T PRK12937        219 AAAVAFLAGPDGAWVNGQVLRVNGGF  244 (245)
T ss_pred             HHHHHHHcCccccCccccEEEeCCCC
Confidence                1566666789999999999874

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.96  E-value=1.2e-27  Score=194.35  Aligned_cols=215  Identities=20%  Similarity=0.169  Sum_probs=156.0

Q ss_pred             CCCCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC----
Q 025755            1 MSGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA----   76 (248)
Q Consensus         1 m~~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~----   76 (248)
                      |..+++|+++||||+|+||+++++.|+++|++|++..|+..+..............++.++++|+.|.+++.++++    
T Consensus         1 ~~~~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   80 (249)
T PRK12825          1 MGSLMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVE   80 (249)
T ss_pred             CCCCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHH
Confidence            6678889999999999999999999999999998877776433333333333334578999999999999888775    


Q ss_pred             ---CCCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHH----hcCCCEEEEEeccceeccCCCCCCCCccC
Q 025755           77 ---GCTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCV----KAKVKRVVVVSSIGAVMLNPNWPKGQVMD  145 (248)
Q Consensus        77 ---~id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~----~~~~~~iV~vSS~~~~~~~~~~~~~~~~~  145 (248)
                         .+|+|||+||.......    .+.+...+++|+.++.++++.+.    +.+.+++|++||..++++.+..       
T Consensus        81 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~~~~~~~-------  153 (249)
T PRK12825         81 RFGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGLPGWPGR-------  153 (249)
T ss_pred             HcCCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccCCCCCCc-------
Confidence               57999999997654431    23346778999999999988874    4567899999998766554332       


Q ss_pred             CCCCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCCCccHHHHHH------------
Q 025755          146 EECWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTINTSSLLLLG------------  210 (248)
Q Consensus       146 e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~------------  210 (248)
                                    ..|+.+|...+.++..++.+   .+++++++|||+++|+.......  ......            
T Consensus       154 --------------~~y~~sK~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~  217 (249)
T PRK12825        154 --------------SNYAAAKAGLVGLTKALARELAEYGITVNMVAPGDIDTDMKEATIE--EAREAKDAETPLGRSGTP  217 (249)
T ss_pred             --------------hHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCccCCccccccc--hhHHhhhccCCCCCCcCH
Confidence                          23999998877777666554   46999999999999987543211  111111            


Q ss_pred             --HHcC-CCCCCCCCchhhhhhhhhccceeE
Q 025755          211 --FLKG-FFFTTPSHSYMLERTLVLNQGVRL  238 (248)
Q Consensus       211 --~~~~-~~l~~~~~~~~~g~~l~vd~g~~~  238 (248)
                        +... .++......+++|+++.++||...
T Consensus       218 ~dva~~~~~~~~~~~~~~~g~~~~i~~g~~~  248 (249)
T PRK12825        218 EDIARAVAFLCSDASDYITGQVIEVTGGVDV  248 (249)
T ss_pred             HHHHHHHHHHhCccccCcCCCEEEeCCCEee
Confidence              0000 034444566889999999999653

>PRK12743 oxidoreductase; Provisional

Probab=99.96  E-value=1.5e-27  Score=195.26  Aligned_cols=214  Identities=14%  Similarity=0.072  Sum_probs=152.2

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-------C
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-------G   77 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-------~   77 (248)
                      ++|+++||||+|+||+++++.|+++|++|+++.++..+......+.+.....++.++.+|++|.++++++++       .
T Consensus         1 ~~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   80 (256)
T PRK12743          1 MAQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGR   80 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            358999999999999999999999999999887655333333333344445678999999999998877765       4


Q ss_pred             CCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHHhc-----CCCEEEEEeccceeccCCCCCCCCccCCCC
Q 025755           78 CTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCVKA-----KVKRVVVVSSIGAVMLNPNWPKGQVMDEEC  148 (248)
Q Consensus        78 id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~~~-----~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~  148 (248)
                      +|+||||||.......    .+.+..++++|+.++.++++++.+.     +.++||++||..+..+.+...         
T Consensus        81 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~~~---------  151 (256)
T PRK12743         81 IDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEHTPLPGAS---------  151 (256)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccccCCCCCcc---------
Confidence            7999999997654321    2345678999999999999887653     236999999976554443322         


Q ss_pred             CCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCCCccHH-HHH-----------HHHc
Q 025755          149 WSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTINTSSL-LLL-----------GFLK  213 (248)
Q Consensus       149 ~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~~~~~~-~~~-----------~~~~  213 (248)
                                  .|+.+|.+.+.+++.++.+   .++++++|+||.+++|+.......... ...           .+..
T Consensus       152 ------------~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~  219 (256)
T PRK12743        152 ------------AYTAAKHALGGLTKAMALELVEHGILVNAVAPGAIATPMNGMDDSDVKPDSRPGIPLGRPGDTHEIAS  219 (256)
T ss_pred             ------------hhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCccccccChHHHHHHHhcCCCCCCCCHHHHHH
Confidence                        3999998777776666543   369999999999999864321110000 000           0000


Q ss_pred             C-CCCCCCCCchhhhhhhhhccceeEE
Q 025755          214 G-FFFTTPSHSYMLERTLVLNQGVRLY  239 (248)
Q Consensus       214 ~-~~l~~~~~~~~~g~~l~vd~g~~~~  239 (248)
                      . .++..+...+++|+++.+|||..+.
T Consensus       220 ~~~~l~~~~~~~~~G~~~~~dgg~~~~  246 (256)
T PRK12743        220 LVAWLCSEGASYTTGQSLIVDGGFMLA  246 (256)
T ss_pred             HHHHHhCccccCcCCcEEEECCCcccc
Confidence            0 1566677789999999999997643

>PRK07890 short chain dehydrogenase; Provisional

Probab=99.96  E-value=8.5e-28  Score=196.73  Aligned_cols=212  Identities=17%  Similarity=0.134  Sum_probs=153.1

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-------
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-------   76 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-------   76 (248)
                      +++|+++||||+|+||+++++.|+++|++|++++|+... .....+.+.....++.++.+|++|.++++.+++       
T Consensus         3 l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   81 (258)
T PRK07890          3 LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAER-LDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFG   81 (258)
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHH-HHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcC
Confidence            678999999999999999999999999999999998643 223333333334578999999999998877664       


Q ss_pred             CCCEEEEccccCCCC-----CCCCccccchhhhHHHHHHHHHHHHhc---CCCEEEEEeccceeccCCCCCCCCccCCCC
Q 025755           77 GCTGVFHVACPVPVG-----KVPNPEVQLIDPAVVGTKNVLNSCVKA---KVKRVVVVSSIGAVMLNPNWPKGQVMDEEC  148 (248)
Q Consensus        77 ~id~vi~~ag~~~~~-----~~~~~~~~~~~~n~~g~~~~~~~~~~~---~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~  148 (248)
                      ++|+||||||.....     ...+.+...+++|+.++..+++++.+.   ..++||++||.....+.+.+.         
T Consensus        82 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~---------  152 (258)
T PRK07890         82 RVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINSMVLRHSQPKYG---------  152 (258)
T ss_pred             CccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEechhhccCCCCcc---------
Confidence            579999999975431     112445678999999999999998753   236999999977655544322         


Q ss_pred             CCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCC--------CccHHHHHHHHc----
Q 025755          149 WSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTI--------NTSSLLLLGFLK----  213 (248)
Q Consensus       149 ~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~--------~~~~~~~~~~~~----  213 (248)
                                  .|+.+|.+.+.+++.++.+   .++++++++||.++||+.....        ............    
T Consensus       153 ------------~Y~~sK~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (258)
T PRK07890        153 ------------AYKMAKGALLAASQSLATELGPQGIRVNSVAPGYIWGDPLKGYFRHQAGKYGVTVEQIYAETAANSDL  220 (258)
T ss_pred             ------------hhHHHHHHHHHHHHHHHHHHhhcCcEEEEEeCCccCcHHHHHHhhhcccccCCCHHHHHHHHhhcCCc
Confidence                        3999998887777777653   3699999999999998643110        000111111111    


Q ss_pred             CC------------CCCCCCCchhhhhhhhhcccee
Q 025755          214 GF------------FFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       214 ~~------------~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                      ++            ++..+...+++|+.+.+|||..
T Consensus       221 ~~~~~~~dva~a~~~l~~~~~~~~~G~~i~~~gg~~  256 (258)
T PRK07890        221 KRLPTDDEVASAVLFLASDLARAITGQTLDVNCGEY  256 (258)
T ss_pred             cccCCHHHHHHHHHHHcCHhhhCccCcEEEeCCccc
Confidence            11            4444555789999999999964

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=99.96  E-value=1.1e-27  Score=192.62  Aligned_cols=175  Identities=19%  Similarity=0.227  Sum_probs=139.5

Q ss_pred             CCCCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCC-CCCeEEEEccCCCHHHHHHHhC---
Q 025755            1 MSGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGA-SENLQLFKTDLLDYEALCAATA---   76 (248)
Q Consensus         1 m~~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Di~d~~~~~~~~~---   76 (248)
                      |..+++++++|||||+|||.+++++|+++|++|+++.|+.+. .....+++... ...+.++.+|+++++++.++..   
T Consensus         1 ~~~~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~k-L~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~   79 (265)
T COG0300           1 PGPMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDK-LEALAKELEDKTGVEVEVIPADLSDPEALERLEDELK   79 (265)
T ss_pred             CCCCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHH-HHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHH
Confidence            345788999999999999999999999999999999999853 33333334332 3568899999999999888775   


Q ss_pred             ----CCCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHH----HHhcCCCEEEEEeccceeccCCCCCCCCcc
Q 025755           77 ----GCTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNS----CVKAKVKRVVVVSSIGAVMLNPNWPKGQVM  144 (248)
Q Consensus        77 ----~id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~----~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~  144 (248)
                          .+|++|||||....+..    .++..+++++|+.+...+.++    +.+.+.+.||+++|.+++.+.|....    
T Consensus        80 ~~~~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~p~p~~av----  155 (265)
T COG0300          80 ERGGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLIPTPYMAV----  155 (265)
T ss_pred             hcCCcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcCCCcchHH----
Confidence                58999999998766532    233367899999997655555    45567789999999998887765333    


Q ss_pred             CCCCCCchhhhccccchHHHHHH----HHHHHHHHHHHhCCccEEEEccCeeecCCCC
Q 025755          145 DEECWSDEEFCKATENYYCLAKT----IAEIQALEYAKRGELDIVTVCPSIVIGPMLQ  198 (248)
Q Consensus       145 ~e~~~~~~~~~~~~~~~Y~~sK~----~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~  198 (248)
                                       |+.||+    ++|.|..|+... |++|.+++||.+.+++..
T Consensus       156 -----------------Y~ATKa~v~~fSeaL~~EL~~~-gV~V~~v~PG~~~T~f~~  195 (265)
T COG0300         156 -----------------YSATKAFVLSFSEALREELKGT-GVKVTAVCPGPTRTEFFD  195 (265)
T ss_pred             -----------------HHHHHHHHHHHHHHHHHHhcCC-CeEEEEEecCcccccccc
Confidence                             999995    788888888544 599999999999999874

>PRK06841 short chain dehydrogenase; Provisional

Probab=99.96  E-value=2.2e-27  Score=193.97  Aligned_cols=210  Identities=16%  Similarity=0.112  Sum_probs=151.9

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC------
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA------   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~------   76 (248)
                      ++++|+++||||+|+||+++++.|+++|++|++++|+...  ......+.  ..++.++.+|++|.++++++++      
T Consensus        12 ~~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~--~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   87 (255)
T PRK06841         12 DLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDV--AEVAAQLL--GGNAKGLVCDVSDSQSVEAAVAAVISAF   87 (255)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHHhh--CCceEEEEecCCCHHHHHHHHHHHHHHh
Confidence            4678999999999999999999999999999999997642  12222221  2457789999999998888765      


Q ss_pred             -CCCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHHh----cCCCEEEEEeccceeccCCCCCCCCccCCC
Q 025755           77 -GCTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCVK----AKVKRVVVVSSIGAVMLNPNWPKGQVMDEE  147 (248)
Q Consensus        77 -~id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~~----~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~  147 (248)
                       ++|+||||||.......    .+.+...+++|+.++.++++++.+    .+.++||++||..+.++.+....       
T Consensus        88 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~-------  160 (255)
T PRK06841         88 GRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVVALERHVA-------  160 (255)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhccCCCCCch-------
Confidence             57999999997653321    233456889999999999988765    35689999999877666554333       


Q ss_pred             CCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCCC-cc-HHHHHHHHcCC-------
Q 025755          148 CWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTIN-TS-SLLLLGFLKGF-------  215 (248)
Q Consensus       148 ~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~~-~~-~~~~~~~~~~~-------  215 (248)
                                    |+.+|++.+.+++.++.+   .++++++|+||.+.+++...... .. .........++       
T Consensus       161 --------------Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  226 (255)
T PRK06841        161 --------------YCASKAGVVGMTKVLALEWGPYGITVNAISPTVVLTELGKKAWAGEKGERAKKLIPAGRFAYPEEI  226 (255)
T ss_pred             --------------HHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCcCcCcccccccchhHHHHHHhcCCCCCCcCHHHH
Confidence                          999998665555555543   26999999999999986432110 00 00111111111       


Q ss_pred             -----CCCCCCCchhhhhhhhhcccee
Q 025755          216 -----FFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       216 -----~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                           ++..+...+++|+++.+|||..
T Consensus       227 a~~~~~l~~~~~~~~~G~~i~~dgg~~  253 (255)
T PRK06841        227 AAAALFLASDAAAMITGENLVIDGGYT  253 (255)
T ss_pred             HHHHHHHcCccccCccCCEEEECCCcc
Confidence                 5666778999999999999975

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=99.96  E-value=3.1e-27  Score=193.24  Aligned_cols=209  Identities=15%  Similarity=0.121  Sum_probs=152.3

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-------
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-------   76 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-------   76 (248)
                      +++|+++||||+++||++++++|+++|++|++++|+... .......+.....++.++.+|++|.+++.++++       
T Consensus         9 l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~-~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   87 (255)
T PRK06113          9 LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADA-ANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKLG   87 (255)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHH-HHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            678999999999999999999999999999999987542 222222333334578889999999998887654       


Q ss_pred             CCCEEEEccccCCCCCC---CCccccchhhhHHHHHHHHHHHHh----cCCCEEEEEeccceeccCCCCCCCCccCCCCC
Q 025755           77 GCTGVFHVACPVPVGKV---PNPEVQLIDPAVVGTKNVLNSCVK----AKVKRVVVVSSIGAVMLNPNWPKGQVMDEECW  149 (248)
Q Consensus        77 ~id~vi~~ag~~~~~~~---~~~~~~~~~~n~~g~~~~~~~~~~----~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~  149 (248)
                      ++|++|||||.......   .+.+...+++|+.++.++++++.+    .+.++||++||..+..+.+...          
T Consensus        88 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~----------  157 (255)
T PRK06113         88 KVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMT----------  157 (255)
T ss_pred             CCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccccCCCCCcc----------
Confidence            47999999997543322   233456689999999999999864    3456999999977655443322          


Q ss_pred             CchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCCCccHHHHHHHHc----C--------
Q 025755          150 SDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLK----G--------  214 (248)
Q Consensus       150 ~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~----~--------  214 (248)
                                 .|+.+|++.+.+++.++.+   .++++++++||.+.+++.....  .+.+..+..+    +        
T Consensus       158 -----------~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~d~  224 (255)
T PRK06113        158 -----------SYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVI--TPEIEQKMLQHTPIRRLGQPQDI  224 (255)
T ss_pred             -----------hhHHHHHHHHHHHHHHHHHhhhhCeEEEEEeccccccccccccc--CHHHHHHHHhcCCCCCCcCHHHH
Confidence                       3999998777777666543   3699999999999998644211  1122111111    1        


Q ss_pred             ----CCCCCCCCchhhhhhhhhccce
Q 025755          215 ----FFFTTPSHSYMLERTLVLNQGV  236 (248)
Q Consensus       215 ----~~l~~~~~~~~~g~~l~vd~g~  236 (248)
                          .++..+...|++|+++.+|||.
T Consensus       225 a~~~~~l~~~~~~~~~G~~i~~~gg~  250 (255)
T PRK06113        225 ANAALFLCSPAASWVSGQILTVSGGG  250 (255)
T ss_pred             HHHHHHHcCccccCccCCEEEECCCc
Confidence                1566677889999999999994

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.96  E-value=1.7e-27  Score=195.05  Aligned_cols=213  Identities=15%  Similarity=0.079  Sum_probs=148.5

Q ss_pred             CCCCCCcEEEEEcC--ccHHHHHHHHHHHHCCCeEEEEEcCCCch-hhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-
Q 025755            1 MSGEDKERVCVTGA--GGYIASWLVKYLLLKGYMVHGTVRDPCDE-KNAHLKKLEGASENLQLFKTDLLDYEALCAATA-   76 (248)
Q Consensus         1 m~~l~~k~vlVtG~--~g~iG~~~~~~l~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-   76 (248)
                      |..+++|+++||||  ++|||+++++.|+++|++|++++|+.... .+...+.+   ..++.++.+|++|.++++++++ 
T Consensus         2 ~~~~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~i~~~~~~   78 (256)
T PRK07889          2 MGLLEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRL---PEPAPVLELDVTNEEHLASLADR   78 (256)
T ss_pred             cccccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhc---CCCCcEEeCCCCCHHHHHHHHHH
Confidence            33478899999999  89999999999999999999998865211 12222222   2357789999999998888764 


Q ss_pred             ------CCCEEEEccccCCCC----C----CCCccccchhhhHHHHHHHHHHHHhc--CCCEEEEEeccceeccCCCCCC
Q 025755           77 ------GCTGVFHVACPVPVG----K----VPNPEVQLIDPAVVGTKNVLNSCVKA--KVKRVVVVSSIGAVMLNPNWPK  140 (248)
Q Consensus        77 ------~id~vi~~ag~~~~~----~----~~~~~~~~~~~n~~g~~~~~~~~~~~--~~~~iV~vSS~~~~~~~~~~~~  140 (248)
                            ++|++|||||.....    .    ..+.++..+++|+.++..+.+.+.+.  +.++||++||.. ..+.+.+. 
T Consensus        79 ~~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~g~Iv~is~~~-~~~~~~~~-  156 (256)
T PRK07889         79 VREHVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNEGGSIVGLDFDA-TVAWPAYD-  156 (256)
T ss_pred             HHHHcCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhcccCceEEEEeecc-cccCCccc-
Confidence                  589999999976421    1    12334567899999998888887654  346999998743 22233222 


Q ss_pred             CCccCCCCCCchhhhccccchHHHHHH----HHHHHHHHHHHhCCccEEEEccCeeecCCCCCCCC--ccHHHH-HHHHc
Q 025755          141 GQVMDEECWSDEEFCKATENYYCLAKT----IAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTIN--TSSLLL-LGFLK  213 (248)
Q Consensus       141 ~~~~~e~~~~~~~~~~~~~~~Y~~sK~----~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~--~~~~~~-~~~~~  213 (248)
                                          +|+.||+    +++.++.++.++ ||+|++|+||.+.+++......  .....+ .....
T Consensus       157 --------------------~Y~asKaal~~l~~~la~el~~~-gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~  215 (256)
T PRK07889        157 --------------------WMGVAKAALESTNRYLARDLGPR-GIRVNLVAAGPIRTLAAKAIPGFELLEEGWDERAPL  215 (256)
T ss_pred             --------------------hhHHHHHHHHHHHHHHHHHhhhc-CeEEEeeccCcccChhhhcccCcHHHHHHHHhcCcc
Confidence                                2899996    556666666654 5999999999999987432110  000001 11100


Q ss_pred             C----C---------CCCCCCCchhhhhhhhhccceeEE
Q 025755          214 G----F---------FFTTPSHSYMLERTLVLNQGVRLY  239 (248)
Q Consensus       214 ~----~---------~l~~~~~~~~~g~~l~vd~g~~~~  239 (248)
                      +    .         ++.++...+++|+++.+|||..++
T Consensus       216 ~~~~~~p~evA~~v~~l~s~~~~~~tG~~i~vdgg~~~~  254 (256)
T PRK07889        216 GWDVKDPTPVARAVVALLSDWFPATTGEIVHVDGGAHAM  254 (256)
T ss_pred             ccccCCHHHHHHHHHHHhCcccccccceEEEEcCceecc
Confidence            1    1         677777899999999999998754

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=99.96  E-value=1.2e-27  Score=199.20  Aligned_cols=223  Identities=12%  Similarity=0.052  Sum_probs=152.7

Q ss_pred             CCCCcEEEEEcC--ccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhc----------CC---CCCeEEEEccC--
Q 025755            3 GEDKERVCVTGA--GGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLE----------GA---SENLQLFKTDL--   65 (248)
Q Consensus         3 ~l~~k~vlVtG~--~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~----------~~---~~~~~~~~~Di--   65 (248)
                      +|++|++|||||  ++|||+++++.|+++|++|++ +|+...... ......          ..   ......+.+|+  
T Consensus         6 ~l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   83 (303)
T PLN02730          6 DLRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNI-FETSLRRGKFDESRKLPDGSLMEITKVYPLDAVF   83 (303)
T ss_pred             CCCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhH-HHHhhhccccchhhhcccccccCcCeeeecceec
Confidence            388999999999  899999999999999999998 665432211 111110          00   01145678888  


Q ss_pred             CCH------------------HHHHHHhC-------CCCEEEEccccCCC--C----CCCCccccchhhhHHHHHHHHHH
Q 025755           66 LDY------------------EALCAATA-------GCTGVFHVACPVPV--G----KVPNPEVQLIDPAVVGTKNVLNS  114 (248)
Q Consensus        66 ~d~------------------~~~~~~~~-------~id~vi~~ag~~~~--~----~~~~~~~~~~~~n~~g~~~~~~~  114 (248)
                      .+.                  ++++++++       ++|++|||||....  .    ...+.|+..+++|+.++..++++
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~~  163 (303)
T PLN02730         84 DTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQH  163 (303)
T ss_pred             CccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHHH
Confidence            322                  25555554       48999999975321  1    11345678899999999988888


Q ss_pred             HHhc--CCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccccchHHHHHH----HHHHHHHHHHHhCCccEEEEc
Q 025755          115 CVKA--KVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAKT----IAEIQALEYAKRGELDIVTVC  188 (248)
Q Consensus       115 ~~~~--~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~----~~e~l~~~~~~~~~i~v~~vr  188 (248)
                      +.+.  ..++||++||..+..+.+.+.                    ..|+.||+    +++.++.++++..|||||+|.
T Consensus       164 ~~p~m~~~G~II~isS~a~~~~~p~~~--------------------~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~  223 (303)
T PLN02730        164 FGPIMNPGGASISLTYIASERIIPGYG--------------------GGMSSAKAALESDTRVLAFEAGRKYKIRVNTIS  223 (303)
T ss_pred             HHHHHhcCCEEEEEechhhcCCCCCCc--------------------hhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEe
Confidence            7765  237999999987665544321                    12999996    455555555543469999999


Q ss_pred             cCeeecCCCCCCCCccHHHHHHHH---c-CC------------CCCCCCCchhhhhhhhhccceeEEEeeccCCCC
Q 025755          189 PSIVIGPMLQPTINTSSLLLLGFL---K-GF------------FFTTPSHSYMLERTLVLNQGVRLYRCKIQIPTL  248 (248)
Q Consensus       189 pg~i~g~~~~~~~~~~~~~~~~~~---~-~~------------~l~~~~~~~~~g~~l~vd~g~~~~~~~~~~p~~  248 (248)
                      ||.+.+++.... ...........   . ++            |+.++...+++|+++.+|||.++.......|||
T Consensus       224 PG~v~T~~~~~~-~~~~~~~~~~~~~~pl~r~~~peevA~~~~fLaS~~a~~itG~~l~vdGG~~~~g~~~~~~~~  298 (303)
T PLN02730        224 AGPLGSRAAKAI-GFIDDMIEYSYANAPLQKELTADEVGNAAAFLASPLASAITGATIYVDNGLNAMGLALDSPTL  298 (303)
T ss_pred             eCCccCchhhcc-cccHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCCEEEECCCccccccCCCcccc
Confidence            999999875421 11111111100   0 11            777888899999999999999999998889986

>PRK09242 tropinone reductase; Provisional

Probab=99.95  E-value=3.5e-27  Score=193.13  Aligned_cols=216  Identities=14%  Similarity=0.115  Sum_probs=155.3

Q ss_pred             CCCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCC--CCCeEEEEccCCCHHHHHHHhC---
Q 025755            2 SGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGA--SENLQLFKTDLLDYEALCAATA---   76 (248)
Q Consensus         2 ~~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Di~d~~~~~~~~~---   76 (248)
                      +++++|+++||||+|+||+++++.|+++|++|++++|+.++. ....+++...  ..++.++.+|++|.++++.+++   
T Consensus         5 ~~~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~-~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   83 (257)
T PRK09242          5 WRLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADAL-AQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVE   83 (257)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHH-HHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence            457899999999999999999999999999999999986432 2222333222  3568889999999988777664   


Q ss_pred             ----CCCEEEEccccCCCC----CCCCccccchhhhHHHHHHHHHHHHh----cCCCEEEEEeccceeccCCCCCCCCcc
Q 025755           77 ----GCTGVFHVACPVPVG----KVPNPEVQLIDPAVVGTKNVLNSCVK----AKVKRVVVVSSIGAVMLNPNWPKGQVM  144 (248)
Q Consensus        77 ----~id~vi~~ag~~~~~----~~~~~~~~~~~~n~~g~~~~~~~~~~----~~~~~iV~vSS~~~~~~~~~~~~~~~~  144 (248)
                          ++|+||||||.....    ...+.+...+++|+.++.++++++.+    .+.++||++||..+..+.+....    
T Consensus        84 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~----  159 (257)
T PRK09242         84 DHWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLTHVRSGAP----  159 (257)
T ss_pred             HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccCCCCCCCcc----
Confidence                579999999974322    12344567899999999999888754    45689999999776655433223    


Q ss_pred             CCCCCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCCCccHHHHHHHHc----C---
Q 025755          145 DEECWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLK----G---  214 (248)
Q Consensus       145 ~e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~----~---  214 (248)
                                       |+.+|.+.+.+++.++.+   .++++++++||++.+|+...... ..........    +   
T Consensus       160 -----------------Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~~~~~-~~~~~~~~~~~~~~~~~~  221 (257)
T PRK09242        160 -----------------YGMTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSGPLS-DPDYYEQVIERTPMRRVG  221 (257)
T ss_pred             -----------------hHHHHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCcccccccC-ChHHHHHHHhcCCCCCCc
Confidence                             999998766666665533   36999999999999997543211 1111111111    0   


Q ss_pred             ---------CCCCCCCCchhhhhhhhhccceeEEE
Q 025755          215 ---------FFFTTPSHSYMLERTLVLNQGVRLYR  240 (248)
Q Consensus       215 ---------~~l~~~~~~~~~g~~l~vd~g~~~~~  240 (248)
                               .++.++...+++|+.+.+|||...+.
T Consensus       222 ~~~~va~~~~~l~~~~~~~~~g~~i~~~gg~~~~~  256 (257)
T PRK09242        222 EPEEVAAAVAFLCMPAASYITGQCIAVDGGFLRYG  256 (257)
T ss_pred             CHHHHHHHHHHHhCcccccccCCEEEECCCeEeec
Confidence                     15666667789999999999977653

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=99.95  E-value=2.9e-27  Score=193.47  Aligned_cols=212  Identities=16%  Similarity=0.113  Sum_probs=153.9

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC------
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA------   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~------   76 (248)
                      .+++|+++||||+|+||+++++.|+++|++|++++|+.+. .....+.+.....++.++.+|++|.+++.++++      
T Consensus         8 ~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   86 (256)
T PRK06124          8 SLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAAT-LEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEH   86 (256)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHH-HHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhc
Confidence            4688999999999999999999999999999999998642 222333343344568899999999998888775      


Q ss_pred             -CCCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHHh----cCCCEEEEEeccceeccCCCCCCCCccCCC
Q 025755           77 -GCTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCVK----AKVKRVVVVSSIGAVMLNPNWPKGQVMDEE  147 (248)
Q Consensus        77 -~id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~~----~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~  147 (248)
                       ++|+||||+|.......    .+.+...+++|+.++.++++.+.+    .+.++||++||..+..+.+....       
T Consensus        87 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~-------  159 (256)
T PRK06124         87 GRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQVARAGDAV-------  159 (256)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhccCCCCccH-------
Confidence             46999999997543322    234567899999999888866654    56789999999876665544333       


Q ss_pred             CCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCCCccHHHHHHHH----cCC-----
Q 025755          148 CWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTINTSSLLLLGFL----KGF-----  215 (248)
Q Consensus       148 ~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~----~~~-----  215 (248)
                                    |+.+|...+.+++.++.+   .++++++|+||.+.++....... .......+.    .++     
T Consensus       160 --------------Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  224 (256)
T PRK06124        160 --------------YPAAKQGLTGLMRALAAEFGPHGITSNAIAPGYFATETNAAMAA-DPAVGPWLAQRTPLGRWGRPE  224 (256)
T ss_pred             --------------hHHHHHHHHHHHHHHHHHHHHhCcEEEEEEECCccCcchhhhcc-ChHHHHHHHhcCCCCCCCCHH
Confidence                          999997666655555433   26999999999999987432210 111111111    011     


Q ss_pred             -------CCCCCCCchhhhhhhhhcccee
Q 025755          216 -------FFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       216 -------~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                             ++..+...|++|+.+.+|||..
T Consensus       225 ~~a~~~~~l~~~~~~~~~G~~i~~dgg~~  253 (256)
T PRK06124        225 EIAGAAVFLASPAASYVNGHVLAVDGGYS  253 (256)
T ss_pred             HHHHHHHHHcCcccCCcCCCEEEECCCcc
Confidence                   5666777899999999999965

>PRK06940 short chain dehydrogenase; Provisional

Probab=99.95  E-value=2.1e-27  Score=196.39  Aligned_cols=228  Identities=21%  Similarity=0.222  Sum_probs=150.3

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC------CCC
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA------GCT   79 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~------~id   79 (248)
                      +|+++|||+ ||||+++++.|+ +|++|++++|+... .....+.+.....++.++.+|++|.+++.++++      ++|
T Consensus         2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~-~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id   78 (275)
T PRK06940          2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEEN-LEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPVT   78 (275)
T ss_pred             CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHH-HHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCCC
Confidence            578999998 699999999996 79999999997642 222233333334578899999999998888775      589


Q ss_pred             EEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhc--CCCEEEEEeccceeccCCCCCCCC----ccCCCCCCc--
Q 025755           80 GVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKA--KVKRVVVVSSIGAVMLNPNWPKGQ----VMDEECWSD--  151 (248)
Q Consensus        80 ~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~--~~~~iV~vSS~~~~~~~~~~~~~~----~~~e~~~~~--  151 (248)
                      +||||||....   ..++..++++|+.++.++++++.+.  ..+++|++||..+..+........    .++.++...  
T Consensus        79 ~li~nAG~~~~---~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (275)
T PRK06940         79 GLVHTAGVSPS---QASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQSGHRLPALTAEQERALATTPTEELLSLP  155 (275)
T ss_pred             EEEECCCcCCc---hhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEecccccCcccchhhhccccccccccccccc
Confidence            99999997542   3557889999999999999998765  236789999876554320000000    000000000  


Q ss_pred             ---hhhhccccchHHHHHHHHHHHHH----HHHHhCCccEEEEccCeeecCCCCCC-CCccH----HHHHHHHcCC----
Q 025755          152 ---EEFCKATENYYCLAKTIAEIQAL----EYAKRGELDIVTVCPSIVIGPMLQPT-INTSS----LLLLGFLKGF----  215 (248)
Q Consensus       152 ---~~~~~~~~~~Y~~sK~~~e~l~~----~~~~~~~i~v~~vrpg~i~g~~~~~~-~~~~~----~~~~~~~~~~----  215 (248)
                         +.........|+.||++.+.+.+    ++.++ +||||+|+||.+.+++.... .....    ........++    
T Consensus       156 ~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~-gIrvn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p  234 (275)
T PRK06940        156 FLQPDAIEDSLHAYQIAKRANALRVMAEAVKWGER-GARINSISPGIISTPLAQDELNGPRGDGYRNMFAKSPAGRPGTP  234 (275)
T ss_pred             cccccccCCccchhHHHHHHHHHHHHHHHHHHccC-CeEEEEeccCcCcCccchhhhcCCchHHHHHHhhhCCcccCCCH
Confidence               00000123459999976555544    44433 69999999999999875321 00111    1111111111    


Q ss_pred             --------CCCCCCCchhhhhhhhhccceeEEE
Q 025755          216 --------FFTTPSHSYMLERTLVLNQGVRLYR  240 (248)
Q Consensus       216 --------~l~~~~~~~~~g~~l~vd~g~~~~~  240 (248)
                              |+.++.+.|++|+.+.||||..+..
T Consensus       235 eeia~~~~fL~s~~~~~itG~~i~vdgg~~~~~  267 (275)
T PRK06940        235 DEIAALAEFLMGPRGSFITGSDFLVDGGATASY  267 (275)
T ss_pred             HHHHHHHHHHcCcccCcccCceEEEcCCeEEEE
Confidence                    7888889999999999999987554

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=99.95  E-value=3.1e-27  Score=192.12  Aligned_cols=210  Identities=15%  Similarity=0.135  Sum_probs=149.2

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-------
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-------   76 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-------   76 (248)
                      |++|+++||||+|+||+++++.|+++|++|++..+..........+.+.....++..+.+|++|.+++.++++       
T Consensus         1 ~~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   80 (246)
T PRK12938          1 MSQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVG   80 (246)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            4679999999999999999999999999998865433222333334443334568888999999998887764       


Q ss_pred             CCCEEEEccccCCCCC----CCCccccchhhhHHHHHHHHHHHH----hcCCCEEEEEeccceeccCCCCCCCCccCCCC
Q 025755           77 GCTGVFHVACPVPVGK----VPNPEVQLIDPAVVGTKNVLNSCV----KAKVKRVVVVSSIGAVMLNPNWPKGQVMDEEC  148 (248)
Q Consensus        77 ~id~vi~~ag~~~~~~----~~~~~~~~~~~n~~g~~~~~~~~~----~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~  148 (248)
                      ++|+||||||......    ..+.++.++++|+.++..+.+++.    +.+.++||++||..+..+.+....        
T Consensus        81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~--------  152 (246)
T PRK12938         81 EIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTN--------  152 (246)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhccCCCCCChh--------
Confidence            5899999999764321    123456788999999777666654    456689999999776555443323        


Q ss_pred             CCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCCCccHHHHHHHHc----C-------
Q 025755          149 WSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLK----G-------  214 (248)
Q Consensus       149 ~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~----~-------  214 (248)
                                   |+.+|.+.+.+.+.++.+   .++++++|+||.+.+|.....   .+..+.....    +       
T Consensus       153 -------------y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~~~---~~~~~~~~~~~~~~~~~~~~~~  216 (246)
T PRK12938        153 -------------YSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAI---RPDVLEKIVATIPVRRLGSPDE  216 (246)
T ss_pred             -------------HHHHHHHHHHHHHHHHHHhhhhCeEEEEEEecccCCchhhhc---ChHHHHHHHhcCCccCCcCHHH
Confidence                         999998655555555432   369999999999999875421   1112211111    1       


Q ss_pred             -----CCCCCCCCchhhhhhhhhcccee
Q 025755          215 -----FFFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       215 -----~~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                           .++.++...+++|+.+.+|||..
T Consensus       217 v~~~~~~l~~~~~~~~~g~~~~~~~g~~  244 (246)
T PRK12938        217 IGSIVAWLASEESGFSTGADFSLNGGLH  244 (246)
T ss_pred             HHHHHHHHcCcccCCccCcEEEECCccc
Confidence                 15677778899999999999864

>PRK12746 short chain dehydrogenase; Provisional

Probab=99.95  E-value=3e-27  Score=193.09  Aligned_cols=213  Identities=15%  Similarity=0.133  Sum_probs=151.0

Q ss_pred             CCCCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEE-EcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC---
Q 025755            1 MSGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGT-VRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA---   76 (248)
Q Consensus         1 m~~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~---   76 (248)
                      |.++++++++||||+|+||+++++.|+++|++|++. .|+.. ........+.....++.++.+|++|.+++.++++   
T Consensus         1 ~~~~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~-~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~   79 (254)
T PRK12746          1 MKNLDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQ-AADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLK   79 (254)
T ss_pred             CCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHH-HHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHH
Confidence            677888999999999999999999999999999875 45542 2223333333334568899999999999888766   


Q ss_pred             ----------CCCEEEEccccCCCCCCC----CccccchhhhHHHHHHHHHHHHhc--CCCEEEEEeccceeccCCCCCC
Q 025755           77 ----------GCTGVFHVACPVPVGKVP----NPEVQLIDPAVVGTKNVLNSCVKA--KVKRVVVVSSIGAVMLNPNWPK  140 (248)
Q Consensus        77 ----------~id~vi~~ag~~~~~~~~----~~~~~~~~~n~~g~~~~~~~~~~~--~~~~iV~vSS~~~~~~~~~~~~  140 (248)
                                ++|+||||||........    +.+...+++|+.++.++++++.+.  +.+++|++||..++.+.+... 
T Consensus        80 ~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~~~~~~~~~~~-  158 (254)
T PRK12746         80 NELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEVRLGFTGSI-  158 (254)
T ss_pred             HHhccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCHHhcCCCCCCc-
Confidence                      489999999976543222    223567789999999999998864  446999999977655444322 


Q ss_pred             CCccCCCCCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCCCccHHHHHHHHc----
Q 025755          141 GQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLK----  213 (248)
Q Consensus       141 ~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~----  213 (248)
                                          .|+.||.+.+.+.+.++.+   .++++++++||.+++|....... ...+......    
T Consensus       159 --------------------~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~~~-~~~~~~~~~~~~~~  217 (254)
T PRK12746        159 --------------------AYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKLLD-DPEIRNFATNSSVF  217 (254)
T ss_pred             --------------------chHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcchhhhcc-ChhHHHHHHhcCCc
Confidence                                3999999888877777653   46999999999999987532100 0000000000    


Q ss_pred             CC------------CCCCCCCchhhhhhhhhccce
Q 025755          214 GF------------FFTTPSHSYMLERTLVLNQGV  236 (248)
Q Consensus       214 ~~------------~l~~~~~~~~~g~~l~vd~g~  236 (248)
                      +.            ++..+...+++|+++++++|.
T Consensus       218 ~~~~~~~dva~~~~~l~~~~~~~~~g~~~~i~~~~  252 (254)
T PRK12746        218 GRIGQVEDIADAVAFLASSDSRWVTGQIIDVSGGF  252 (254)
T ss_pred             CCCCCHHHHHHHHHHHcCcccCCcCCCEEEeCCCc
Confidence            00            344444567888889998884

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.95  E-value=3e-27  Score=193.23  Aligned_cols=210  Identities=19%  Similarity=0.251  Sum_probs=151.7

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-------CC
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-------GC   78 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-------~i   78 (248)
                      +|+++||||+|+||+++++.|+++|++|++++|+..+......+.+.....++.++.+|++|.+++.++++       .+
T Consensus         2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (256)
T PRK12745          2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRI   81 (256)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence            47999999999999999999999999999999875433333333333334578999999999998887765       57


Q ss_pred             CEEEEccccCCCCC------CCCccccchhhhHHHHHHHHHHHHhc-----C-----CCEEEEEeccceeccCCCCCCCC
Q 025755           79 TGVFHVACPVPVGK------VPNPEVQLIDPAVVGTKNVLNSCVKA-----K-----VKRVVVVSSIGAVMLNPNWPKGQ  142 (248)
Q Consensus        79 d~vi~~ag~~~~~~------~~~~~~~~~~~n~~g~~~~~~~~~~~-----~-----~~~iV~vSS~~~~~~~~~~~~~~  142 (248)
                      |+||||||......      ..+.+++.+++|+.++.++++++.+.     +     .++||++||..+.++.+....  
T Consensus        82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~--  159 (256)
T PRK12745         82 DCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVSPNRGE--  159 (256)
T ss_pred             CEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccCCCCCcc--
Confidence            99999999754321      12345678999999999998887543     1     467999999877665543323  


Q ss_pred             ccCCCCCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCCCccHHHHH----------
Q 025755          143 VMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTINTSSLLLL----------  209 (248)
Q Consensus       143 ~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~----------  209 (248)
                                         |+.+|++.+.+++.++.+   +++++++++||.+++++...........+.          
T Consensus       160 -------------------Y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~  220 (256)
T PRK12745        160 -------------------YCISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTAPVTAKYDALIAKGLVPMPRWG  220 (256)
T ss_pred             -------------------cHHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCccccccchhHHhhhhhcCCCcCCCc
Confidence                               999999888887777653   479999999999999875432111001110          


Q ss_pred             ------HHHcCCCCCCCCCchhhhhhhhhccceeE
Q 025755          210 ------GFLKGFFFTTPSHSYMLERTLVLNQGVRL  238 (248)
Q Consensus       210 ------~~~~~~~l~~~~~~~~~g~~l~vd~g~~~  238 (248)
                            ....  ++......+++|+++.+|||.++
T Consensus       221 ~~~d~a~~i~--~l~~~~~~~~~G~~~~i~gg~~~  253 (256)
T PRK12745        221 EPEDVARAVA--ALASGDLPYSTGQAIHVDGGLSI  253 (256)
T ss_pred             CHHHHHHHHH--HHhCCcccccCCCEEEECCCeec
Confidence                  0000  34444556789999999999764

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=99.95  E-value=4.5e-27  Score=192.96  Aligned_cols=214  Identities=16%  Similarity=0.151  Sum_probs=152.1

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC------
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA------   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~------   76 (248)
                      .+++|+++||||+|+||+++++.|+++|++|++..|+..+........+.....++.++.+|++|.+++.++++      
T Consensus         4 ~~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~   83 (261)
T PRK08936          4 DLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEF   83 (261)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            47899999999999999999999999999999988865433333333343334568899999999998888765      


Q ss_pred             -CCCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHH----HHHhcC-CCEEEEEeccceeccCCCCCCCCccCC
Q 025755           77 -GCTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLN----SCVKAK-VKRVVVVSSIGAVMLNPNWPKGQVMDE  146 (248)
Q Consensus        77 -~id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~----~~~~~~-~~~iV~vSS~~~~~~~~~~~~~~~~~e  146 (248)
                       .+|++|||||.......    .+.++..+++|+.++..+++    .+.+.+ .++||++||..+..+.+.+..      
T Consensus        84 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~~~~~~~~------  157 (261)
T PRK08936         84 GTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQIPWPLFVH------  157 (261)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccccCCCCCCcc------
Confidence             47999999997654322    23446678999988765554    445543 479999999766555443333      


Q ss_pred             CCCCchhhhccccchHHHHHH----HHHHHHHHHHHhCCccEEEEccCeeecCCCCCCCCccHHHHHHH----HcC----
Q 025755          147 ECWSDEEFCKATENYYCLAKT----IAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTINTSSLLLLGF----LKG----  214 (248)
Q Consensus       147 ~~~~~~~~~~~~~~~Y~~sK~----~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~----~~~----  214 (248)
                                     |+.+|+    +++.++.++.++ +++|++|+||.+.+|+....... .......    ..+    
T Consensus       158 ---------------Y~~sKaa~~~~~~~la~e~~~~-gi~v~~v~pg~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~  220 (261)
T PRK08936        158 ---------------YAASKGGVKLMTETLAMEYAPK-GIRVNNIGPGAINTPINAEKFAD-PKQRADVESMIPMGYIGK  220 (261)
T ss_pred             ---------------cHHHHHHHHHHHHHHHHHHhhc-CeEEEEEEECcCCCCccccccCC-HHHHHHHHhcCCCCCCcC
Confidence                           999995    555666666554 69999999999999975322111 1111111    001    


Q ss_pred             --------CCCCCCCCchhhhhhhhhccceeEE
Q 025755          215 --------FFFTTPSHSYMLERTLVLNQGVRLY  239 (248)
Q Consensus       215 --------~~l~~~~~~~~~g~~l~vd~g~~~~  239 (248)
                              .++.++...+++|+.+.+|+|..++
T Consensus       221 ~~~va~~~~~l~s~~~~~~~G~~i~~d~g~~~~  253 (261)
T PRK08936        221 PEEIAAVAAWLASSEASYVTGITLFADGGMTLY  253 (261)
T ss_pred             HHHHHHHHHHHcCcccCCccCcEEEECCCcccC
Confidence                    1677778899999999999997743

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=99.95  E-value=2.6e-27  Score=194.80  Aligned_cols=204  Identities=21%  Similarity=0.178  Sum_probs=148.6

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC------
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA------   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~------   76 (248)
                      .+++|+++||||+|+||+++++.|+++|++|++.+|+.....          ..++.++.+|++|.++++++++      
T Consensus         6 ~l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~----------~~~~~~~~~D~~~~~~~~~~~~~~~~~~   75 (266)
T PRK06171          6 NLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQ----------HENYQFVPTDVSSAEEVNHTVAEIIEKF   75 (266)
T ss_pred             cCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccc----------cCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            367899999999999999999999999999999998764211          2367889999999999888765      


Q ss_pred             -CCCEEEEccccCCCCC-------------CCCccccchhhhHHHHHHHHHHHHhc----CCCEEEEEeccceeccCCCC
Q 025755           77 -GCTGVFHVACPVPVGK-------------VPNPEVQLIDPAVVGTKNVLNSCVKA----KVKRVVVVSSIGAVMLNPNW  138 (248)
Q Consensus        77 -~id~vi~~ag~~~~~~-------------~~~~~~~~~~~n~~g~~~~~~~~~~~----~~~~iV~vSS~~~~~~~~~~  138 (248)
                       .+|+||||||......             ..+.+..++++|+.++.++++++.+.    +.++||++||..+..+.+..
T Consensus        76 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  155 (266)
T PRK06171         76 GRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLEGSEGQ  155 (266)
T ss_pred             CCCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccccCCCCCC
Confidence             4799999999754321             12334568899999999998888653    45799999998776655433


Q ss_pred             CCCCccCCCCCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeee-cCCCCCCC--------C-ccH
Q 025755          139 PKGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVI-GPMLQPTI--------N-TSS  205 (248)
Q Consensus       139 ~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~-g~~~~~~~--------~-~~~  205 (248)
                      ..                     |+.+|+..+.+++.++.+   .++++++|+||.+. +++.....        . ...
T Consensus       156 ~~---------------------Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~~t~~~~~~~~~~~~~~~~~~~~  214 (266)
T PRK06171        156 SC---------------------YAATKAALNSFTRSWAKELGKHNIRVVGVAPGILEATGLRTPEYEEALAYTRGITVE  214 (266)
T ss_pred             ch---------------------hHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccccCCCcChhhhhhhccccCCCHH
Confidence            33                     999998666666655543   36999999999986 44322110        0 001


Q ss_pred             HHHHHHHc------CC------------CCCCCCCchhhhhhhhhcccee
Q 025755          206 LLLLGFLK------GF------------FFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       206 ~~~~~~~~------~~------------~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                      .....+..      ++            |+.++...|+||++|.+|||..
T Consensus       215 ~~~~~~~~~~~~p~~r~~~~~eva~~~~fl~s~~~~~itG~~i~vdgg~~  264 (266)
T PRK06171        215 QLRAGYTKTSTIPLGRSGKLSEVADLVCYLLSDRASYITGVTTNIAGGKT  264 (266)
T ss_pred             HHHhhhcccccccCCCCCCHHHhhhheeeeeccccccceeeEEEecCccc
Confidence            11111111      11            7778888999999999999965

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=99.95  E-value=2.8e-27  Score=192.48  Aligned_cols=214  Identities=15%  Similarity=0.122  Sum_probs=150.0

Q ss_pred             CCCCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCC---
Q 025755            1 MSGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAG---   77 (248)
Q Consensus         1 m~~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~---   77 (248)
                      |..+++|+++||||+|+||+++++.|+++|++|++..+...+......+.+.....++.++.+|++|.+++.+++++   
T Consensus         1 ~~~~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   80 (247)
T PRK12935          1 MVQLNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVN   80 (247)
T ss_pred             CCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            66788999999999999999999999999999987665432222233333333345789999999999998888764   


Q ss_pred             ----CCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHHh----cCCCEEEEEeccceeccCCCCCCCCccC
Q 025755           78 ----CTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCVK----AKVKRVVVVSSIGAVMLNPNWPKGQVMD  145 (248)
Q Consensus        78 ----id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~~----~~~~~iV~vSS~~~~~~~~~~~~~~~~~  145 (248)
                          +|+||||||.......    .+.+.+.+++|+.++.++++++.+    .+.++||++||..+..+.+....     
T Consensus        81 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~-----  155 (247)
T PRK12935         81 HFGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQAGGFGQTN-----  155 (247)
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcCCCCCCcc-----
Confidence                7999999998654322    134567889999999999888875    34579999999776655433222     


Q ss_pred             CCCCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCCCcc-HHHHHHHHcCC------
Q 025755          146 EECWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTINTS-SLLLLGFLKGF------  215 (248)
Q Consensus       146 e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~~~~-~~~~~~~~~~~------  215 (248)
                                      |+.+|.+.+.+++.++.+   .++++++++||.+.++......... .........+.      
T Consensus       156 ----------------Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~ed  219 (247)
T PRK12935        156 ----------------YSAAKAGMLGFTKSLALELAKTNVTVNAICPGFIDTEMVAEVPEEVRQKIVAKIPKKRFGQADE  219 (247)
T ss_pred             ----------------hHHHHHHHHHHHHHHHHHHHHcCcEEEEEEeCCCcChhhhhccHHHHHHHHHhCCCCCCcCHHH
Confidence                            999998666665555543   3699999999999987644221110 01111111111      


Q ss_pred             ------CCCCCCCchhhhhhhhhccce
Q 025755          216 ------FFTTPSHSYMLERTLVLNQGV  236 (248)
Q Consensus       216 ------~l~~~~~~~~~g~~l~vd~g~  236 (248)
                            ++.. ...+++|+.+++|||.
T Consensus       220 va~~~~~~~~-~~~~~~g~~~~i~~g~  245 (247)
T PRK12935        220 IAKGVVYLCR-DGAYITGQQLNINGGL  245 (247)
T ss_pred             HHHHHHHHcC-cccCccCCEEEeCCCc
Confidence                  2332 2457889999999984

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=99.95  E-value=2.3e-27  Score=193.17  Aligned_cols=212  Identities=18%  Similarity=0.187  Sum_probs=152.0

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-------
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-------   76 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-------   76 (248)
                      |++|+++||||+|+||++++++|+++|++|++++|+... .......+.....++.++.+|++|.++++++++       
T Consensus         1 ~~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~   79 (250)
T TIGR03206         1 LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREA-AEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALG   79 (250)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHH-HHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            568999999999999999999999999999999987642 222222333334578899999999999888775       


Q ss_pred             CCCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHH----hcCCCEEEEEeccceeccCCCCCCCCccCCCC
Q 025755           77 GCTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCV----KAKVKRVVVVSSIGAVMLNPNWPKGQVMDEEC  148 (248)
Q Consensus        77 ~id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~----~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~  148 (248)
                      ++|+||||||.......    .+.+...+++|+.++.++++++.    +.+.++||++||..++.+.+....        
T Consensus        80 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~~~~~~~~--------  151 (250)
T TIGR03206        80 PVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARVGSSGEAV--------  151 (250)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhccCCCCCch--------
Confidence            58999999997543221    22345679999999998887775    456689999999877665543333        


Q ss_pred             CCchhhhccccchHHHHHHHHHHHHHHHHHhC---CccEEEEccCeeecCCCCCCC---Cc----cHHHHHHHHcCC---
Q 025755          149 WSDEEFCKATENYYCLAKTIAEIQALEYAKRG---ELDIVTVCPSIVIGPMLQPTI---NT----SSLLLLGFLKGF---  215 (248)
Q Consensus       149 ~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~---~i~v~~vrpg~i~g~~~~~~~---~~----~~~~~~~~~~~~---  215 (248)
                                   |+.+|++.+.+.+.++.+.   ++++++++||.+++++.....   ..    ...+......++   
T Consensus       152 -------------Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (250)
T TIGR03206       152 -------------YAACKGGLVAFSKTMAREHARHGITVNVVCPGPTDTALLDDICGGAENPEKLREAFTRAIPLGRLGQ  218 (250)
T ss_pred             -------------HHHHHHHHHHHHHHHHHHHhHhCcEEEEEecCcccchhHHhhhhccCChHHHHHHHHhcCCccCCcC
Confidence                         9999976666655555442   699999999999998533210   00    011111111111   


Q ss_pred             ---------CCCCCCCchhhhhhhhhcccee
Q 025755          216 ---------FFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       216 ---------~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                               ++..+...+++|+++.+|||..
T Consensus       219 ~~dva~~~~~l~~~~~~~~~g~~~~~~~g~~  249 (250)
T TIGR03206       219 PDDLPGAILFFSSDDASFITGQVLSVSGGLT  249 (250)
T ss_pred             HHHHHHHHHHHcCcccCCCcCcEEEeCCCcc
Confidence                     4666778899999999999853

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=99.95  E-value=3.3e-27  Score=193.51  Aligned_cols=213  Identities=15%  Similarity=0.071  Sum_probs=154.6

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-------
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-------   76 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-------   76 (248)
                      +++|+++||||+|+||+++++.|+++|++|++++|+..+ .....+.+.....++.++.+|++|.++++++++       
T Consensus        10 ~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~-~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~   88 (259)
T PRK08213         10 LSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEE-LEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFG   88 (259)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHH-HHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            678999999999999999999999999999999997642 222222333334568899999999999877664       


Q ss_pred             CCCEEEEccccCCCCC----CCCccccchhhhHHHHHHHHHHHHhc-----CCCEEEEEeccceeccCCCCCCCCccCCC
Q 025755           77 GCTGVFHVACPVPVGK----VPNPEVQLIDPAVVGTKNVLNSCVKA-----KVKRVVVVSSIGAVMLNPNWPKGQVMDEE  147 (248)
Q Consensus        77 ~id~vi~~ag~~~~~~----~~~~~~~~~~~n~~g~~~~~~~~~~~-----~~~~iV~vSS~~~~~~~~~~~~~~~~~e~  147 (248)
                      .+|+||||||......    ..+.+...+++|+.++.++++++.+.     +.++||++||..++++.+...        
T Consensus        89 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~~~~~--------  160 (259)
T PRK08213         89 HVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPPEV--------  160 (259)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCccc--------
Confidence            5799999999743221    12344567899999999999987654     567999999977665543210        


Q ss_pred             CCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCCCccHHHHHHHHcCC---------
Q 025755          148 CWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKGF---------  215 (248)
Q Consensus       148 ~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~~~---------  215 (248)
                               .+...|+.+|++.+.+++.++.+   .++++++++||.+.++.....   .+...+....+.         
T Consensus       161 ---------~~~~~Y~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~~~~---~~~~~~~~~~~~~~~~~~~~~  228 (259)
T PRK08213        161 ---------MDTIAYNTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMTRGT---LERLGEDLLAHTPLGRLGDDE  228 (259)
T ss_pred             ---------cCcchHHHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcchhhh---hHHHHHHHHhcCCCCCCcCHH
Confidence                     01234999999888888887764   369999999999998865421   112222211111         


Q ss_pred             -------CCCCCCCchhhhhhhhhcccee
Q 025755          216 -------FFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       216 -------~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                             ++..+...+++|+++.+|||..
T Consensus       229 ~va~~~~~l~~~~~~~~~G~~~~~~~~~~  257 (259)
T PRK08213        229 DLKGAALLLASDASKHITGQILAVDGGVS  257 (259)
T ss_pred             HHHHHHHHHhCccccCccCCEEEECCCee
Confidence                   5556667899999999999965

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.95  E-value=2.5e-27  Score=193.98  Aligned_cols=213  Identities=14%  Similarity=0.023  Sum_probs=148.9

Q ss_pred             CCCCCCcEEEEEcCcc--HHHHHHHHHHHHCCCeEEEEEcCCC----------chhhHHhhhhcCCCCCeEEEEccCCCH
Q 025755            1 MSGEDKERVCVTGAGG--YIASWLVKYLLLKGYMVHGTVRDPC----------DEKNAHLKKLEGASENLQLFKTDLLDY   68 (248)
Q Consensus         1 m~~l~~k~vlVtG~~g--~iG~~~~~~l~~~g~~V~~~~r~~~----------~~~~~~~~~~~~~~~~~~~~~~Di~d~   68 (248)
                      |..+++|+++||||++  +||+++++.|+++|++|++++|+..          .......+.+.....++.++++|++|.
T Consensus         1 ~~~l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~   80 (256)
T PRK12859          1 MNQLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQN   80 (256)
T ss_pred             CCCcCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCH
Confidence            6678999999999994  9999999999999999998864311          011122223333456788999999999


Q ss_pred             HHHHHHhC-------CCCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHH----HhcCCCEEEEEeccceec
Q 025755           69 EALCAATA-------GCTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSC----VKAKVKRVVVVSSIGAVM  133 (248)
Q Consensus        69 ~~~~~~~~-------~id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~----~~~~~~~iV~vSS~~~~~  133 (248)
                      ++++++++       .+|+||||||.......    .+.++..+++|+.++..+.+++    .+.+.++||++||..+..
T Consensus        81 ~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~  160 (256)
T PRK12859         81 DAPKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQFQG  160 (256)
T ss_pred             HHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEEcccccCC
Confidence            99888775       37999999997543211    2345678999999987775554    444567999999977654


Q ss_pred             cCCCCCCCCccCCCCCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCC---------
Q 025755          134 LNPNWPKGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTI---------  201 (248)
Q Consensus       134 ~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~---------  201 (248)
                      +.+.+.                     .|+.+|++.+.+.+.++.+   .++++++|+||.+.++......         
T Consensus       161 ~~~~~~---------------------~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~~~~~~~~~~~~~~~  219 (256)
T PRK12859        161 PMVGEL---------------------AYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGWMTEEIKQGLLPMFP  219 (256)
T ss_pred             CCCCch---------------------HHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCCCCHHHHHHHHhcCC
Confidence            443322                     3999997666665555543   3699999999999987532110         


Q ss_pred             ---CccHHHHHHHHcCCCCCCCCCchhhhhhhhhccce
Q 025755          202 ---NTSSLLLLGFLKGFFFTTPSHSYMLERTLVLNQGV  236 (248)
Q Consensus       202 ---~~~~~~~~~~~~~~~l~~~~~~~~~g~~l~vd~g~  236 (248)
                         ...+.-+.....  ++.++...|++|+++.+|||.
T Consensus       220 ~~~~~~~~d~a~~~~--~l~s~~~~~~~G~~i~~dgg~  255 (256)
T PRK12859        220 FGRIGEPKDAARLIK--FLASEEAEWITGQIIHSEGGF  255 (256)
T ss_pred             CCCCcCHHHHHHHHH--HHhCccccCccCcEEEeCCCc
Confidence               001111111111  677777889999999999994

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.95  E-value=8.5e-27  Score=189.94  Aligned_cols=213  Identities=15%  Similarity=0.114  Sum_probs=150.1

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEE-EcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC------
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGT-VRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA------   76 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~------   76 (248)
                      |.+|+++||||+|+||+++++.|+++|++|++. .|+.. ......+.+.....++.++.+|++|++++.++++      
T Consensus         2 ~~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (250)
T PRK08063          2 FSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRK-AAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEF   80 (250)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHH-HHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            567899999999999999999999999998874 56543 2223333333335678899999999999888776      


Q ss_pred             -CCCEEEEccccCCCCCCC----CccccchhhhHHHHHHHHHHHHhc----CCCEEEEEeccceeccCCCCCCCCccCCC
Q 025755           77 -GCTGVFHVACPVPVGKVP----NPEVQLIDPAVVGTKNVLNSCVKA----KVKRVVVVSSIGAVMLNPNWPKGQVMDEE  147 (248)
Q Consensus        77 -~id~vi~~ag~~~~~~~~----~~~~~~~~~n~~g~~~~~~~~~~~----~~~~iV~vSS~~~~~~~~~~~~~~~~~e~  147 (248)
                       .+|+||||||........    +.+...+++|+.++.++++++.+.    +.++||++||..+..+.+...        
T Consensus        81 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~--------  152 (250)
T PRK08063         81 GRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIRYLENYT--------  152 (250)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhccCCCCcc--------
Confidence             479999999975433221    223456789999999988888753    567999999976655443322        


Q ss_pred             CCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCCCccHHHHHH--------------
Q 025755          148 CWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTINTSSLLLLG--------------  210 (248)
Q Consensus       148 ~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~--------------  210 (248)
                                   .|+.+|.+.+.+++.++.+   .++++++++||.+.+++..... ........              
T Consensus       153 -------------~y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  218 (250)
T PRK08063        153 -------------TVGVSKAALEALTRYLAVELAPKGIAVNAVSGGAVDTDALKHFP-NREELLEDARAKTPAGRMVEPE  218 (250)
T ss_pred             -------------HHHHHHHHHHHHHHHHHHHHhHhCeEEEeEecCcccCchhhhcc-CchHHHHHHhcCCCCCCCcCHH
Confidence                         3999999888887777654   4799999999999987632110 00111111              


Q ss_pred             -HHcC-CCCCCCCCchhhhhhhhhccceeEE
Q 025755          211 -FLKG-FFFTTPSHSYMLERTLVLNQGVRLY  239 (248)
Q Consensus       211 -~~~~-~~l~~~~~~~~~g~~l~vd~g~~~~  239 (248)
                       +.+. .++......+++|+.+.+|||..++
T Consensus       219 dva~~~~~~~~~~~~~~~g~~~~~~gg~~~~  249 (250)
T PRK08063        219 DVANAVLFLCSPEADMIRGQTIIVDGGRSLL  249 (250)
T ss_pred             HHHHHHHHHcCchhcCccCCEEEECCCeeee
Confidence             1100 0344445678899999999997753

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.95  E-value=4.1e-27  Score=190.16  Aligned_cols=203  Identities=17%  Similarity=0.154  Sum_probs=147.7

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCH-HHHHHHhCCCCEE
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDY-EALCAATAGCTGV   81 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~-~~~~~~~~~id~v   81 (248)
                      .+++|+++||||+|+||+++++.|+++|++|++++|+....          ...++.++.+|++|. +.+.+.+.++|+|
T Consensus         2 ~l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~----------~~~~~~~~~~D~~~~~~~~~~~~~~id~l   71 (235)
T PRK06550          2 EFMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPD----------LSGNFHFLQLDLSDDLEPLFDWVPSVDIL   71 (235)
T ss_pred             CCCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccc----------cCCcEEEEECChHHHHHHHHHhhCCCCEE
Confidence            37889999999999999999999999999999999875321          124688999999987 5555555679999


Q ss_pred             EEccccCCC-C----CCCCccccchhhhHHHHHHHHHHHHh----cCCCEEEEEeccceeccCCCCCCCCccCCCCCCch
Q 025755           82 FHVACPVPV-G----KVPNPEVQLIDPAVVGTKNVLNSCVK----AKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDE  152 (248)
Q Consensus        82 i~~ag~~~~-~----~~~~~~~~~~~~n~~g~~~~~~~~~~----~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~  152 (248)
                      |||||.... .    ...+.+...+++|+.++.++++++.+    .+.++||++||..+..+.+....            
T Consensus        72 v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~------------  139 (235)
T PRK06550         72 CNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFVAGGGGAA------------  139 (235)
T ss_pred             EECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCCCcc------------
Confidence            999996532 1    11234567899999999999888864    34579999999877665544333            


Q ss_pred             hhhccccchHHHHHHHHHHHHHHHHHhC---CccEEEEccCeeecCCCCCCCCccHHHHHHHHc----C-----------
Q 025755          153 EFCKATENYYCLAKTIAEIQALEYAKRG---ELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLK----G-----------  214 (248)
Q Consensus       153 ~~~~~~~~~Y~~sK~~~e~l~~~~~~~~---~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~----~-----------  214 (248)
                               |+.+|+..+.+++.++.++   ++++++++||++.++....... .......+..    +           
T Consensus       140 ---------Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~pg~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~a~~  209 (235)
T PRK06550        140 ---------YTASKHALAGFTKQLALDYAKDGIQVFGIAPGAVKTPMTAADFE-PGGLADWVARETPIKRWAEPEEVAEL  209 (235)
T ss_pred             ---------cHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCccCcccccccC-chHHHHHHhccCCcCCCCCHHHHHHH
Confidence                     9999986555555555432   6999999999999987542211 1111111111    1           


Q ss_pred             -CCCCCCCCchhhhhhhhhcccee
Q 025755          215 -FFFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       215 -~~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                       .++.++...+++|+++.+|||+.
T Consensus       210 ~~~l~s~~~~~~~g~~~~~~gg~~  233 (235)
T PRK06550        210 TLFLASGKADYMQGTIVPIDGGWT  233 (235)
T ss_pred             HHHHcChhhccCCCcEEEECCcee
Confidence             16667777899999999999964

>PRK07774 short chain dehydrogenase; Provisional

Probab=99.95  E-value=5.8e-27  Score=190.92  Aligned_cols=210  Identities=17%  Similarity=0.129  Sum_probs=151.3

Q ss_pred             CCCCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC----
Q 025755            1 MSGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA----   76 (248)
Q Consensus         1 m~~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~----   76 (248)
                      |+.+++|+++||||+|+||+++++.|+++|++|++++|+... .......+.....++.++.+|++|.++++.+++    
T Consensus         1 ~~~~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   79 (250)
T PRK07774          1 MGRFDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEG-AERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVS   79 (250)
T ss_pred             CcccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            667889999999999999999999999999999999997632 222223333333467889999999998877665    


Q ss_pred             ---CCCEEEEccccCCCC-------CCCCccccchhhhHHHHHHHHHHHHhc----CCCEEEEEeccceeccCCCCCCCC
Q 025755           77 ---GCTGVFHVACPVPVG-------KVPNPEVQLIDPAVVGTKNVLNSCVKA----KVKRVVVVSSIGAVMLNPNWPKGQ  142 (248)
Q Consensus        77 ---~id~vi~~ag~~~~~-------~~~~~~~~~~~~n~~g~~~~~~~~~~~----~~~~iV~vSS~~~~~~~~~~~~~~  142 (248)
                         ++|+||||||.....       ...+.+...+++|+.++.++++++.+.    +.++||++||..++.+.       
T Consensus        80 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~-------  152 (250)
T PRK07774         80 AFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWLYS-------  152 (250)
T ss_pred             HhCCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccccCCc-------
Confidence               579999999975421       112334567899999999998888754    46799999997654321       


Q ss_pred             ccCCCCCCchhhhccccchHHHHHHHHHHHHHHHHHhC---CccEEEEccCeeecCCCCCCCCccHHHHHHHHcCC----
Q 025755          143 VMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKRG---ELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKGF----  215 (248)
Q Consensus       143 ~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~---~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~~~----  215 (248)
                                       +.|+.||++.+.+++.++.++   ++++++++||.+.+++.....  ...+...+..+.    
T Consensus       153 -----------------~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~--~~~~~~~~~~~~~~~~  213 (250)
T PRK07774        153 -----------------NFYGLAKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEATRTVT--PKEFVADMVKGIPLSR  213 (250)
T ss_pred             -----------------cccHHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccCccccccC--CHHHHHHHHhcCCCCC
Confidence                             229999998888888887653   699999999999998765321  112222221111    


Q ss_pred             ------------CCCCCCCchhhhhhhhhcccee
Q 025755          216 ------------FFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       216 ------------~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                                  ++......+.+|+++.+++|..
T Consensus       214 ~~~~~d~a~~~~~~~~~~~~~~~g~~~~v~~g~~  247 (250)
T PRK07774        214 MGTPEDLVGMCLFLLSDEASWITGQIFNVDGGQI  247 (250)
T ss_pred             CcCHHHHHHHHHHHhChhhhCcCCCEEEECCCee
Confidence                        2222333467888888888855

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=99.95  E-value=3.3e-27  Score=192.28  Aligned_cols=216  Identities=21%  Similarity=0.143  Sum_probs=154.3

Q ss_pred             CCCCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC----
Q 025755            1 MSGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA----   76 (248)
Q Consensus         1 m~~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~----   76 (248)
                      |.++++|+++||||+|+||+++++.|+++|++|++++|+..+. ......+.....++.++.+|+.|.++++++++    
T Consensus         1 ~~~~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~-~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   79 (251)
T PRK12826          1 TRDLEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDA-AATAELVEAAGGKARARQVDVRDRAALKAAVAAGVE   79 (251)
T ss_pred             CCCCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            5667889999999999999999999999999999999986422 22223333334568899999999999988875    


Q ss_pred             ---CCCEEEEccccCCCCC----CCCccccchhhhHHHHHHHHHHHH----hcCCCEEEEEecccee-ccCCCCCCCCcc
Q 025755           77 ---GCTGVFHVACPVPVGK----VPNPEVQLIDPAVVGTKNVLNSCV----KAKVKRVVVVSSIGAV-MLNPNWPKGQVM  144 (248)
Q Consensus        77 ---~id~vi~~ag~~~~~~----~~~~~~~~~~~n~~g~~~~~~~~~----~~~~~~iV~vSS~~~~-~~~~~~~~~~~~  144 (248)
                         .+|+|||++|......    ..+.+...++.|+.++.++++++.    +.+.++||++||..+. .+.+..      
T Consensus        80 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~~~~~~~~------  153 (251)
T PRK12826         80 DFGRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGPRVGYPGL------  153 (251)
T ss_pred             HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhhccCCCCc------
Confidence               5899999998765422    123446788999999999988874    4466899999997654 333221      


Q ss_pred             CCCCCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCCCcc-HHHHHHHHcC-C----
Q 025755          145 DEECWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTINTS-SLLLLGFLKG-F----  215 (248)
Q Consensus       145 ~e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~~~~-~~~~~~~~~~-~----  215 (248)
                                     ..|+.+|...+.+++.++.+   .++++++++||+++||......... ...+.....- .    
T Consensus       154 ---------------~~y~~sK~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (251)
T PRK12826        154 ---------------AHYAASKAGLVGFTRALALELAARNITVNSVHPGGVDTPMAGNLGDAQWAEAIAAAIPLGRLGEP  218 (251)
T ss_pred             ---------------cHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhhhcCchHHHHHHHhcCCCCCCcCH
Confidence                           23999999888887777654   3699999999999999754321110 0111100000 0    


Q ss_pred             --------CCCCCCCchhhhhhhhhccceeE
Q 025755          216 --------FFTTPSHSYMLERTLVLNQGVRL  238 (248)
Q Consensus       216 --------~l~~~~~~~~~g~~l~vd~g~~~  238 (248)
                              ++......+++|+++++|||...
T Consensus       219 ~dva~~~~~l~~~~~~~~~g~~~~~~~g~~~  249 (251)
T PRK12826        219 EDIAAAVLFLASDEARYITGQTLPVDGGATL  249 (251)
T ss_pred             HHHHHHHHHHhCccccCcCCcEEEECCCccC
Confidence                    23333455789999999998653

>PRK06138 short chain dehydrogenase; Provisional

Probab=99.95  E-value=4.8e-27  Score=191.56  Aligned_cols=213  Identities=18%  Similarity=0.070  Sum_probs=152.2

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC------
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA------   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~------   76 (248)
                      ++++|+++||||+|+||+++++.|+++|++|++++|+.+.. ....+.+. ...++.++++|++|.++++++++      
T Consensus         2 ~~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   79 (252)
T PRK06138          2 RLAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAA-ERVAAAIA-AGGRAFARQGDVGSAEAVEALVDFVAARW   79 (252)
T ss_pred             CCCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHH-HHHHHHHh-cCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            47899999999999999999999999999999999986432 22222222 24568899999999999988775      


Q ss_pred             -CCCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHH----HhcCCCEEEEEeccceeccCCCCCCCCccCCC
Q 025755           77 -GCTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSC----VKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEE  147 (248)
Q Consensus        77 -~id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~----~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~  147 (248)
                       ++|+||||+|.......    .+.+...+++|+.++.++.+.+    ++.+.++||++||..+.++.+...        
T Consensus        80 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~--------  151 (252)
T PRK06138         80 GRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLALAGGRGRA--------  151 (252)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCCcc--------
Confidence             58999999997654322    2334567899999987776665    445678999999987766654332        


Q ss_pred             CCCchhhhccccchHHHHHHHHHHHHHHHHHhC---CccEEEEccCeeecCCCCCCCC--ccHHHHHHHHc-----CC--
Q 025755          148 CWSDEEFCKATENYYCLAKTIAEIQALEYAKRG---ELDIVTVCPSIVIGPMLQPTIN--TSSLLLLGFLK-----GF--  215 (248)
Q Consensus       148 ~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~---~i~v~~vrpg~i~g~~~~~~~~--~~~~~~~~~~~-----~~--  215 (248)
                                   .|+.+|.+.+.+++.++.++   ++++++++||.+++++......  ..+........     +.  
T Consensus       152 -------------~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (252)
T PRK06138        152 -------------AYVASKGAIASLTRAMALDHATDGIRVNAVAPGTIDTPYFRRIFARHADPEALREALRARHPMNRFG  218 (252)
T ss_pred             -------------HHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEECCccCcchhhhhccccChHHHHHHHHhcCCCCCCc
Confidence                         39999988887777776543   6999999999999986432100  00111111110     00  


Q ss_pred             ----------CCCCCCCchhhhhhhhhccceeE
Q 025755          216 ----------FFTTPSHSYMLERTLVLNQGVRL  238 (248)
Q Consensus       216 ----------~l~~~~~~~~~g~~l~vd~g~~~  238 (248)
                                ++......+.+|+.+.+|||+++
T Consensus       219 ~~~d~a~~~~~l~~~~~~~~~g~~~~~~~g~~~  251 (252)
T PRK06138        219 TAEEVAQAALFLASDESSFATGTTLVVDGGWLA  251 (252)
T ss_pred             CHHHHHHHHHHHcCchhcCccCCEEEECCCeec
Confidence                      33444457889999999999763

>PRK12827 short chain dehydrogenase; Provisional

Probab=99.95  E-value=7e-27  Score=190.09  Aligned_cols=213  Identities=20%  Similarity=0.182  Sum_probs=153.0

Q ss_pred             CCCCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCch---hhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-
Q 025755            1 MSGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDE---KNAHLKKLEGASENLQLFKTDLLDYEALCAATA-   76 (248)
Q Consensus         1 m~~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~---~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-   76 (248)
                      |..+++|+++||||+|+||+++++.|+++|++|++++|.....   ......++.....++.++.+|+.|.++++++++ 
T Consensus         1 ~~~~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~   80 (249)
T PRK12827          1 MASLDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDA   80 (249)
T ss_pred             CCCcCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHH
Confidence            5667889999999999999999999999999999987643211   112222333334578899999999999888764 


Q ss_pred             ------CCCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHH-----hcCCCEEEEEeccceeccCCCCCCC
Q 025755           77 ------GCTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCV-----KAKVKRVVVVSSIGAVMLNPNWPKG  141 (248)
Q Consensus        77 ------~id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~-----~~~~~~iV~vSS~~~~~~~~~~~~~  141 (248)
                            ++|+||||||.......    .+.+...+++|+.++.++++++.     +.+.+++|++||..++++.+.... 
T Consensus        81 ~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~-  159 (249)
T PRK12827         81 GVEEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVRGNRGQVN-  159 (249)
T ss_pred             HHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhcCCCCCCch-
Confidence                  58999999998653321    23346688999999999999988     346679999999877766543333 


Q ss_pred             CccCCCCCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCCCc-------------cH
Q 025755          142 QVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTINT-------------SS  205 (248)
Q Consensus       142 ~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~~~-------------~~  205 (248)
                                          |+.+|...+.+++.++.+   .++++++++||.++++........             ..
T Consensus       160 --------------------y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~  219 (249)
T PRK12827        160 --------------------YAASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMADNAAPTEHLLNPVPVQRLGEP  219 (249)
T ss_pred             --------------------hHHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCcccccchHHHHHhhCCCcCCcCH
Confidence                                999998777776666543   269999999999999875432100             01


Q ss_pred             HHHHHHHcCCCCCCCCCchhhhhhhhhccce
Q 025755          206 LLLLGFLKGFFFTTPSHSYMLERTLVLNQGV  236 (248)
Q Consensus       206 ~~~~~~~~~~~l~~~~~~~~~g~~l~vd~g~  236 (248)
                      ....+...  ++......+++|+.+.+|||.
T Consensus       220 ~~va~~~~--~l~~~~~~~~~g~~~~~~~g~  248 (249)
T PRK12827        220 DEVAALVA--FLVSDAASYVTGQVIPVDGGF  248 (249)
T ss_pred             HHHHHHHH--HHcCcccCCccCcEEEeCCCC
Confidence            11111110  344455678899999999885

>PRK06523 short chain dehydrogenase; Provisional

Probab=99.95  E-value=6.5e-27  Score=191.80  Aligned_cols=204  Identities=18%  Similarity=0.138  Sum_probs=146.1

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC------
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA------   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~------   76 (248)
                      .+++|+++||||+|+||+++++.|+++|++|++++|+..+.          ...++.++++|++|.++++++++      
T Consensus         6 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~----------~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   75 (260)
T PRK06523          6 ELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD----------LPEGVEFVAADLTTAEGCAAVARAVLERL   75 (260)
T ss_pred             CCCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh----------cCCceeEEecCCCCHHHHHHHHHHHHHHc
Confidence            36789999999999999999999999999999999976321          12467889999999998776653      


Q ss_pred             -CCCEEEEccccCCCC------CCCCccccchhhhHHHHHHHHHHHH----hcCCCEEEEEeccceeccCC-CCCCCCcc
Q 025755           77 -GCTGVFHVACPVPVG------KVPNPEVQLIDPAVVGTKNVLNSCV----KAKVKRVVVVSSIGAVMLNP-NWPKGQVM  144 (248)
Q Consensus        77 -~id~vi~~ag~~~~~------~~~~~~~~~~~~n~~g~~~~~~~~~----~~~~~~iV~vSS~~~~~~~~-~~~~~~~~  144 (248)
                       .+|+||||||.....      ...+.+...+++|+.++.++++++.    +.+.++||++||..+..+.+ .       
T Consensus        76 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~-------  148 (260)
T PRK06523         76 GGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRLPLPES-------  148 (260)
T ss_pred             CCCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccccCCCCCC-------
Confidence             579999999964321      1123456788999999987766654    44567999999976554322 1       


Q ss_pred             CCCCCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCC-------C-ccHHHHHHH--
Q 025755          145 DEECWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTI-------N-TSSLLLLGF--  211 (248)
Q Consensus       145 ~e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~-------~-~~~~~~~~~--  211 (248)
                                    ...|+.+|+..+.+++.++.+   .++++++++||.+.+|+.....       . ........+  
T Consensus       149 --------------~~~Y~~sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (260)
T PRK06523        149 --------------TTAYAAAKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEAAVALAERLAEAAGTDYEGAKQIIMD  214 (260)
T ss_pred             --------------cchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccHHHHHHHHHhhcCCCHHHHHHHHHH
Confidence                          123999998777666666543   2699999999999998642100       0 001111100  


Q ss_pred             -----HcCC------------CCCCCCCchhhhhhhhhcccee
Q 025755          212 -----LKGF------------FFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       212 -----~~~~------------~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                           ..++            ++.++...+++|+.+.+|||..
T Consensus       215 ~~~~~p~~~~~~~~~va~~~~~l~s~~~~~~~G~~~~vdgg~~  257 (260)
T PRK06523        215 SLGGIPLGRPAEPEEVAELIAFLASDRAASITGTEYVIDGGTV  257 (260)
T ss_pred             HhccCccCCCCCHHHHHHHHHHHhCcccccccCceEEecCCcc
Confidence                 0011            6777778899999999999964

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=99.95  E-value=5.9e-27  Score=192.71  Aligned_cols=213  Identities=12%  Similarity=0.063  Sum_probs=153.4

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-------
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-------   76 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-------   76 (248)
                      +++|+++||||+++||++++++|+++|++|++++|+..+. ......+.....++.++++|++|.++++++++       
T Consensus         8 ~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   86 (265)
T PRK07097          8 LKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELV-DKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVG   86 (265)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHH-HHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence            5789999999999999999999999999999998876432 22333333334578899999999999888875       


Q ss_pred             CCCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHHh----cCCCEEEEEeccceeccCCCCCCCCccCCCC
Q 025755           77 GCTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCVK----AKVKRVVVVSSIGAVMLNPNWPKGQVMDEEC  148 (248)
Q Consensus        77 ~id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~~----~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~  148 (248)
                      .+|+||||||.......    .+.+...+++|+.++..+.+.+.+    .+.++||++||..+.++.+....        
T Consensus        87 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~--------  158 (265)
T PRK07097         87 VIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSELGRETVSA--------  158 (265)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCccccCCCCCCcc--------
Confidence            48999999998654321    234466789999998877777654    46689999999776655443333        


Q ss_pred             CCchhhhccccchHHHHHHHHHHHHHHHHHhC---CccEEEEccCeeecCCCCCCCC-----ccHHHHHHHH----cC--
Q 025755          149 WSDEEFCKATENYYCLAKTIAEIQALEYAKRG---ELDIVTVCPSIVIGPMLQPTIN-----TSSLLLLGFL----KG--  214 (248)
Q Consensus       149 ~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~---~i~v~~vrpg~i~g~~~~~~~~-----~~~~~~~~~~----~~--  214 (248)
                                   |+.+|+..+.+++.++.+.   |++|++|+||.+.+++......     ....+...+.    .+  
T Consensus       159 -------------Y~~sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (265)
T PRK07097        159 -------------YAAAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQTAPLRELQADGSRHPFDQFIIAKTPAARW  225 (265)
T ss_pred             -------------HHHHHHHHHHHHHHHHHHhhhcCceEEEEEeccccccchhhhhhccccccchhHHHHHHhcCCccCC
Confidence                         9999987777666666543   6999999999999986532110     0011111111    01  


Q ss_pred             ----------CCCCCCCCchhhhhhhhhccceeE
Q 025755          215 ----------FFFTTPSHSYMLERTLVLNQGVRL  238 (248)
Q Consensus       215 ----------~~l~~~~~~~~~g~~l~vd~g~~~  238 (248)
                                .++..+...+++|+.+.+|||...
T Consensus       226 ~~~~dva~~~~~l~~~~~~~~~g~~~~~~gg~~~  259 (265)
T PRK07097        226 GDPEDLAGPAVFLASDASNFVNGHILYVDGGILA  259 (265)
T ss_pred             cCHHHHHHHHHHHhCcccCCCCCCEEEECCCcee
Confidence                      155566678999999999999654

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=99.95  E-value=5e-27  Score=191.51  Aligned_cols=205  Identities=18%  Similarity=0.094  Sum_probs=151.4

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC------
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA------   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~------   76 (248)
                      .+++|+++||||+|+||+++++.|+++|++|++++|+.          ......++.++++|++|.++++++++      
T Consensus         5 ~~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~----------~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   74 (252)
T PRK08220          5 DFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF----------LTQEDYPFATFVLDVSDAAAVAQVCQRLLAET   74 (252)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch----------hhhcCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence            36789999999999999999999999999999999875          11123568899999999999888775      


Q ss_pred             -CCCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHHh----cCCCEEEEEeccceeccCCCCCCCCccCCC
Q 025755           77 -GCTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCVK----AKVKRVVVVSSIGAVMLNPNWPKGQVMDEE  147 (248)
Q Consensus        77 -~id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~~----~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~  147 (248)
                       .+|+||||||.......    .+.+...+++|+.++.++++++.+    .+.++||++||..+..+.+..         
T Consensus        75 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~---------  145 (252)
T PRK08220         75 GPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHVPRIGM---------  145 (252)
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhccCCCCC---------
Confidence             37999999997654322    234567899999999999888754    455799999997655444322         


Q ss_pred             CCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCCCc-------cHHHHHHHHc----
Q 025755          148 CWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTINT-------SSLLLLGFLK----  213 (248)
Q Consensus       148 ~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~~~-------~~~~~~~~~~----  213 (248)
                                  ..|+.+|++.+.+.+.++.+   .++++++++||.+++|+.......       ..........    
T Consensus       146 ------------~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (252)
T PRK08220        146 ------------AAYGASKAALTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQRTLWVDEDGEQQVIAGFPEQFKLGIPL  213 (252)
T ss_pred             ------------chhHHHHHHHHHHHHHHHHHhhHhCeEEEEEecCcCcchhhhhhccchhhhhhhhhhHHHHHhhcCCC
Confidence                        23999998777777776654   469999999999999864321000       0000111111    


Q ss_pred             CC------------CCCCCCCchhhhhhhhhccceeE
Q 025755          214 GF------------FFTTPSHSYMLERTLVLNQGVRL  238 (248)
Q Consensus       214 ~~------------~l~~~~~~~~~g~~l~vd~g~~~  238 (248)
                      ++            ++..+...+++|+++.+|||..+
T Consensus       214 ~~~~~~~dva~~~~~l~~~~~~~~~g~~i~~~gg~~~  250 (252)
T PRK08220        214 GKIARPQEIANAVLFLASDLASHITLQDIVVDGGATL  250 (252)
T ss_pred             cccCCHHHHHHHHHHHhcchhcCccCcEEEECCCeec
Confidence            11            56677788999999999999653

>PRK06949 short chain dehydrogenase; Provisional

Probab=99.95  E-value=5.1e-27  Score=192.11  Aligned_cols=211  Identities=16%  Similarity=0.209  Sum_probs=152.1

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-------
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-------   76 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-------   76 (248)
                      +++|+++||||+|+||+++++.|+++|++|++++|+.++ .......+.....++.++.+|+++.++++++++       
T Consensus         7 ~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~-~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   85 (258)
T PRK06949          7 LEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVER-LKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAG   85 (258)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence            678999999999999999999999999999999998642 222223333334578899999999999888775       


Q ss_pred             CCCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHHhc----C--------CCEEEEEeccceeccCCCCCC
Q 025755           77 GCTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCVKA----K--------VKRVVVVSSIGAVMLNPNWPK  140 (248)
Q Consensus        77 ~id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~~~----~--------~~~iV~vSS~~~~~~~~~~~~  140 (248)
                      .+|+||||||.......    .+.+..++++|+.++.++++++.+.    .        .+++|++||..++.+.+..  
T Consensus        86 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~--  163 (258)
T PRK06949         86 TIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVLPQI--  163 (258)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCCCCCc--
Confidence            58999999997543321    2345678899999999888877532    1        3699999997655443322  


Q ss_pred             CCccCCCCCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCCC-ccHHHHHHHHc-CC
Q 025755          141 GQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTIN-TSSLLLLGFLK-GF  215 (248)
Q Consensus       141 ~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~~-~~~~~~~~~~~-~~  215 (248)
                                         .+|+.+|++.+.+++.++.+   .++++++|+||++++|+...... .....+.+... ++
T Consensus       164 -------------------~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~  224 (258)
T PRK06949        164 -------------------GLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEINHHHWETEQGQKLVSMLPRKR  224 (258)
T ss_pred             -------------------cHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcchhccChHHHHHHHhcCCCCC
Confidence                               23999998766666666543   36999999999999987542110 00011111111 11


Q ss_pred             ------------CCCCCCCchhhhhhhhhccce
Q 025755          216 ------------FFTTPSHSYMLERTLVLNQGV  236 (248)
Q Consensus       216 ------------~l~~~~~~~~~g~~l~vd~g~  236 (248)
                                  ++.++.+.|++|+++.+|||.
T Consensus       225 ~~~p~~~~~~~~~l~~~~~~~~~G~~i~~dgg~  257 (258)
T PRK06949        225 VGKPEDLDGLLLLLAADESQFINGAIISADDGF  257 (258)
T ss_pred             CcCHHHHHHHHHHHhChhhcCCCCcEEEeCCCC
Confidence                        677777899999999999985

>PRK07814 short chain dehydrogenase; Provisional

Probab=99.95  E-value=8.8e-27  Score=191.47  Aligned_cols=221  Identities=16%  Similarity=0.163  Sum_probs=158.6

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-------
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-------   76 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-------   76 (248)
                      +++|+++||||+||||+++++.|+++|++|++++|+..+ .....+.+.....++.++.+|++|.+++.++++       
T Consensus         8 ~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~-~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   86 (263)
T PRK07814          8 LDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQ-LDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFG   86 (263)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            578999999999999999999999999999999998642 222233333334578899999999999887765       


Q ss_pred             CCCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHHh-----cCCCEEEEEeccceeccCCCCCCCCccCCC
Q 025755           77 GCTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCVK-----AKVKRVVVVSSIGAVMLNPNWPKGQVMDEE  147 (248)
Q Consensus        77 ~id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~~-----~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~  147 (248)
                      ++|+|||+||.......    .+.+...+++|+.++.++++++.+     .+.++||++||..+..+.+...        
T Consensus        87 ~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~--------  158 (263)
T PRK07814         87 RLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRLAGRGFA--------  158 (263)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccCCCCCCc--------
Confidence            68999999997543322    234567899999999999999875     3567999999977665544322        


Q ss_pred             CCCchhhhccccchHHHHHHHHHHHHHHHHHhC--CccEEEEccCeeecCCCCCCCCccHHHHHHHHc----C-------
Q 025755          148 CWSDEEFCKATENYYCLAKTIAEIQALEYAKRG--ELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLK----G-------  214 (248)
Q Consensus       148 ~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~--~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~----~-------  214 (248)
                                   .|+.+|+..+.+++.++.+.  ++++++|+||.+.+++..... ....+......    .       
T Consensus       159 -------------~Y~~sK~a~~~~~~~~~~e~~~~i~v~~i~Pg~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  224 (263)
T PRK07814        159 -------------AYGTAKAALAHYTRLAALDLCPRIRVNAIAPGSILTSALEVVA-ANDELRAPMEKATPLRRLGDPED  224 (263)
T ss_pred             -------------hhHHHHHHHHHHHHHHHHHHCCCceEEEEEeCCCcCchhhhcc-CCHHHHHHHHhcCCCCCCcCHHH
Confidence                         39999988887777777643  589999999999887532110 00111111100    0       


Q ss_pred             -----CCCCCCCCchhhhhhhhhccceeEEEeeccCCC
Q 025755          215 -----FFFTTPSHSYMLERTLVLNQGVRLYRCKIQIPT  247 (248)
Q Consensus       215 -----~~l~~~~~~~~~g~~l~vd~g~~~~~~~~~~p~  247 (248)
                           .++..+...+++|+.+.+|||...-..-+.+|.
T Consensus       225 va~~~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~  262 (263)
T PRK07814        225 IAAAAVYLASPAGSYLTGKTLEVDGGLTFPNLDLPIPD  262 (263)
T ss_pred             HHHHHHHHcCccccCcCCCEEEECCCccCCCCCCCCCC
Confidence                 055556667899999999999776444444443

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.95  E-value=8.6e-27  Score=190.64  Aligned_cols=207  Identities=14%  Similarity=0.106  Sum_probs=144.5

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-------
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-------   76 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-------   76 (248)
                      +++|+++||||+|+||+++++.|+++|++|++..++..+.. .   .+..  .++.++.+|++|.++++++++       
T Consensus         5 l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~-~---~l~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   78 (255)
T PRK06463          5 FKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEA-K---ELRE--KGVFTIKCDVGNRDQVKKSKEVVEKEFG   78 (255)
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHH-H---HHHh--CCCeEEEecCCCHHHHHHHHHHHHHHcC
Confidence            67899999999999999999999999999998877653221 1   1211  147889999999999888765       


Q ss_pred             CCCEEEEccccCCCCC----CCCccccchhhhHHHHHHHHHH----HHhcCCCEEEEEeccceeccC-CCCCCCCccCCC
Q 025755           77 GCTGVFHVACPVPVGK----VPNPEVQLIDPAVVGTKNVLNS----CVKAKVKRVVVVSSIGAVMLN-PNWPKGQVMDEE  147 (248)
Q Consensus        77 ~id~vi~~ag~~~~~~----~~~~~~~~~~~n~~g~~~~~~~----~~~~~~~~iV~vSS~~~~~~~-~~~~~~~~~~e~  147 (248)
                      ++|+||||||......    ..+.+...+++|+.++..+.+.    +++.+.++||++||..++.+. +.          
T Consensus        79 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~----------  148 (255)
T PRK06463         79 RVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAGIGTAAEG----------  148 (255)
T ss_pred             CCCEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHhCCCCCCC----------
Confidence            5799999999754321    1234567899999997655544    444566899999997654321 11          


Q ss_pred             CCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCC--CCccHHHHHHHHc----C----
Q 025755          148 CWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPT--INTSSLLLLGFLK----G----  214 (248)
Q Consensus       148 ~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~--~~~~~~~~~~~~~----~----  214 (248)
                                 ...|+.||++.+.+++.++.+   .+++|++++||++.+++....  ..........+..    +    
T Consensus       149 -----------~~~Y~asKaa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (255)
T PRK06463        149 -----------TTFYAITKAGIIILTRRLAFELGKYGIRVNAVAPGWVETDMTLSGKSQEEAEKLRELFRNKTVLKTTGK  217 (255)
T ss_pred             -----------ccHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCCCchhhcccCccchHHHHHHHHhCCCcCCCcC
Confidence                       123999997666666666543   369999999999998864321  0110111111111    1    


Q ss_pred             --------CCCCCCCCchhhhhhhhhcccee
Q 025755          215 --------FFFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       215 --------~~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                              .++..+...+++|+.+.+|||..
T Consensus       218 ~~~va~~~~~l~s~~~~~~~G~~~~~dgg~~  248 (255)
T PRK06463        218 PEDIANIVLFLASDDARYITGQVIVADGGRI  248 (255)
T ss_pred             HHHHHHHHHHHcChhhcCCCCCEEEECCCee
Confidence                    15666777899999999999964

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=99.95  E-value=3.4e-27  Score=191.12  Aligned_cols=206  Identities=21%  Similarity=0.239  Sum_probs=149.9

Q ss_pred             EEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-------CCCEE
Q 025755            9 VCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-------GCTGV   81 (248)
Q Consensus         9 vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-------~id~v   81 (248)
                      ++||||+||||+++++.|+++|++|++++|+..+......+.+.....++.++.+|++|.+++.++++       .+|++
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~l   80 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYYGV   80 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            58999999999999999999999999998765433333344444445678999999999998887765       47999


Q ss_pred             EEccccCCCCC----CCCccccchhhhHHHHHHHHHHHH-----hcCCCEEEEEeccceeccCCCCCCCCccCCCCCCch
Q 025755           82 FHVACPVPVGK----VPNPEVQLIDPAVVGTKNVLNSCV-----KAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDE  152 (248)
Q Consensus        82 i~~ag~~~~~~----~~~~~~~~~~~n~~g~~~~~~~~~-----~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~  152 (248)
                      |||||......    ..+++..++++|+.++.++++++.     +.+.++||++||..+.++.+....            
T Consensus        81 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~------------  148 (239)
T TIGR01831        81 VLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGVMGNRGQVN------------  148 (239)
T ss_pred             EECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhhccCCCCCcc------------
Confidence            99999754332    234456789999999999988753     235579999999887777654333            


Q ss_pred             hhhccccchHHHHHHHHH----HHHHHHHHhCCccEEEEccCeeecCCCCCCCCccHHHHHHHHcCC------------C
Q 025755          153 EFCKATENYYCLAKTIAE----IQALEYAKRGELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKGF------------F  216 (248)
Q Consensus       153 ~~~~~~~~~Y~~sK~~~e----~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~~~------------~  216 (248)
                               |+.+|++.+    .++.++.++ |+++++++||.+.+++.................++            +
T Consensus       149 ---------Y~~sK~a~~~~~~~la~e~~~~-gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~  218 (239)
T TIGR01831       149 ---------YSAAKAGLIGATKALAVELAKR-KITVNCIAPGLIDTEMLAEVEHDLDEALKTVPMNRMGQPAEVASLAGF  218 (239)
T ss_pred             ---------hHHHHHHHHHHHHHHHHHHhHh-CeEEEEEEEccCccccchhhhHHHHHHHhcCCCCCCCCHHHHHHHHHH
Confidence                     999997554    444555444 59999999999999986532111111111111111            7


Q ss_pred             CCCCCCchhhhhhhhhccce
Q 025755          217 FTTPSHSYMLERTLVLNQGV  236 (248)
Q Consensus       217 l~~~~~~~~~g~~l~vd~g~  236 (248)
                      +.++...|++|+.+.+|||.
T Consensus       219 l~~~~~~~~~g~~~~~~gg~  238 (239)
T TIGR01831       219 LMSDGASYVTRQVISVNGGM  238 (239)
T ss_pred             HcCchhcCccCCEEEecCCc
Confidence            77888899999999999984

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.95  E-value=7.5e-27  Score=195.92  Aligned_cols=214  Identities=14%  Similarity=0.056  Sum_probs=153.4

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC------
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA------   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~------   76 (248)
                      ++++|+++||||+||||++++++|+++|++|++.+++.........+.+.....++.++.+|++|.++++++++      
T Consensus         9 ~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~g   88 (306)
T PRK07792          9 DLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVGLG   88 (306)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHhC
Confidence            47899999999999999999999999999999998865333333334444445678899999999988888765      


Q ss_pred             CCCEEEEccccCCCCC----CCCccccchhhhHHHHHHHHHHHHhc-----------CCCEEEEEeccceeccCCCCCCC
Q 025755           77 GCTGVFHVACPVPVGK----VPNPEVQLIDPAVVGTKNVLNSCVKA-----------KVKRVVVVSSIGAVMLNPNWPKG  141 (248)
Q Consensus        77 ~id~vi~~ag~~~~~~----~~~~~~~~~~~n~~g~~~~~~~~~~~-----------~~~~iV~vSS~~~~~~~~~~~~~  141 (248)
                      ++|+||||||......    ..+.+...+++|+.++.++++++.+.           ..++||++||..+..+.+.... 
T Consensus        89 ~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~-  167 (306)
T PRK07792         89 GLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGPVGQAN-  167 (306)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCcccccCCCCCch-
Confidence            5899999999865432    12345678999999999998876532           1269999999876665543333 


Q ss_pred             CccCCCCCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCCC------------ccHH
Q 025755          142 QVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTIN------------TSSL  206 (248)
Q Consensus       142 ~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~~------------~~~~  206 (248)
                                          |+.+|++.+.+++.++.+   +||+||+|+||. .+++......            ..+.
T Consensus       168 --------------------Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg~-~t~~~~~~~~~~~~~~~~~~~~~~pe  226 (306)
T PRK07792        168 --------------------YGAAKAGITALTLSAARALGRYGVRANAICPRA-RTAMTADVFGDAPDVEAGGIDPLSPE  226 (306)
T ss_pred             --------------------HHHHHHHHHHHHHHHHHHhhhcCeEEEEECCCC-CCchhhhhccccchhhhhccCCCCHH
Confidence                                999998777776666543   469999999984 4443221100            0111


Q ss_pred             HHHHHHcCCCCCCCCCchhhhhhhhhccceeEEE
Q 025755          207 LLLGFLKGFFFTTPSHSYMLERTLVLNQGVRLYR  240 (248)
Q Consensus       207 ~~~~~~~~~~l~~~~~~~~~g~~l~vd~g~~~~~  240 (248)
                      .+....  .++.++...+++|+++.+|||.....
T Consensus       227 ~va~~v--~~L~s~~~~~~tG~~~~v~gg~~~~~  258 (306)
T PRK07792        227 HVVPLV--QFLASPAAAEVNGQVFIVYGPMVTLV  258 (306)
T ss_pred             HHHHHH--HHHcCccccCCCCCEEEEcCCeEEEE
Confidence            111111  16677777899999999999987643

>PRK06123 short chain dehydrogenase; Provisional

Probab=99.95  E-value=8.1e-27  Score=189.85  Aligned_cols=208  Identities=15%  Similarity=0.134  Sum_probs=147.8

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-------CC
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-------GC   78 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-------~i   78 (248)
                      +|+++||||+|+||++++++|+++|++|++..++..+........+.....++.++.+|++|.+++.++++       .+
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   81 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRL   81 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence            47899999999999999999999999998877554322223333333334568889999999998888775       58


Q ss_pred             CEEEEccccCCCCC-C----CCccccchhhhHHHHHHHHHHHHhc-------CCCEEEEEeccceeccCCCCCCCCccCC
Q 025755           79 TGVFHVACPVPVGK-V----PNPEVQLIDPAVVGTKNVLNSCVKA-------KVKRVVVVSSIGAVMLNPNWPKGQVMDE  146 (248)
Q Consensus        79 d~vi~~ag~~~~~~-~----~~~~~~~~~~n~~g~~~~~~~~~~~-------~~~~iV~vSS~~~~~~~~~~~~~~~~~e  146 (248)
                      |+||||||...... .    .+++...+++|+.++.++++++.+.       +.++||++||..+.++.+..        
T Consensus        82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~--------  153 (248)
T PRK06123         82 DALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSPGE--------  153 (248)
T ss_pred             CEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCCCC--------
Confidence            99999999764321 1    2334578999999999988887653       13579999998776665421        


Q ss_pred             CCCCchhhhccccchHHHHHHHHHHHHHHHHHhC---CccEEEEccCeeecCCCCCCCCccHHHHHHHH-----------
Q 025755          147 ECWSDEEFCKATENYYCLAKTIAEIQALEYAKRG---ELDIVTVCPSIVIGPMLQPTINTSSLLLLGFL-----------  212 (248)
Q Consensus       147 ~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~---~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~-----------  212 (248)
                                  ...|+.+|+..+.+++.++.+.   ++++++++||+++||+.....  .+.......           
T Consensus       154 ------------~~~Y~~sKaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~~~~--~~~~~~~~~~~~p~~~~~~~  219 (248)
T PRK06123        154 ------------YIDYAASKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHASGG--EPGRVDRVKAGIPMGRGGTA  219 (248)
T ss_pred             ------------ccchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCchhhccC--CHHHHHHHHhcCCCCCCcCH
Confidence                        0129999998888888777653   799999999999999753211  111111111           


Q ss_pred             ----cCC-CCCCCCCchhhhhhhhhccc
Q 025755          213 ----KGF-FFTTPSHSYMLERTLVLNQG  235 (248)
Q Consensus       213 ----~~~-~l~~~~~~~~~g~~l~vd~g  235 (248)
                          ... ++......+++|+++.+|||
T Consensus       220 ~d~a~~~~~l~~~~~~~~~g~~~~~~gg  247 (248)
T PRK06123        220 EEVARAILWLLSDEASYTTGTFIDVSGG  247 (248)
T ss_pred             HHHHHHHHHHhCccccCccCCEEeecCC
Confidence                000 44555567889999998886

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.95  E-value=1.1e-26  Score=190.03  Aligned_cols=211  Identities=15%  Similarity=0.079  Sum_probs=150.9

Q ss_pred             CCCcEEEEEcCcc--HHHHHHHHHHHHCCCeEEEEEcCCCc----------hhhHHhhhhcCCCCCeEEEEccCCCHHHH
Q 025755            4 EDKERVCVTGAGG--YIASWLVKYLLLKGYMVHGTVRDPCD----------EKNAHLKKLEGASENLQLFKTDLLDYEAL   71 (248)
Q Consensus         4 l~~k~vlVtG~~g--~iG~~~~~~l~~~g~~V~~~~r~~~~----------~~~~~~~~~~~~~~~~~~~~~Di~d~~~~   71 (248)
                      +++|+++||||+|  +||+++++.|+++|++|++++|+..+          ........+.....++.++.+|++|.+++
T Consensus         3 l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~   82 (256)
T PRK12748          3 LMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPYAP   82 (256)
T ss_pred             CCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHHHH
Confidence            7889999999995  89999999999999999999987211          01112222333345789999999999988


Q ss_pred             HHHhC-------CCCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHHhc----CCCEEEEEeccceeccCC
Q 025755           72 CAATA-------GCTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCVKA----KVKRVVVVSSIGAVMLNP  136 (248)
Q Consensus        72 ~~~~~-------~id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~~~----~~~~iV~vSS~~~~~~~~  136 (248)
                      ..+++       .+|+||||||.......    .+.+...+++|+.++.++++++.+.    +.++||++||..++.+.+
T Consensus        83 ~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~  162 (256)
T PRK12748         83 NRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQSLGPMP  162 (256)
T ss_pred             HHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCccccCCCC
Confidence            77665       47999999997543322    1234567899999999999988643    457999999976554443


Q ss_pred             CCCCCCccCCCCCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCC------------
Q 025755          137 NWPKGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTI------------  201 (248)
Q Consensus       137 ~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~------------  201 (248)
                      ..                     ..|+.+|++.+.+++.++.+   .++++++++||.+.++......            
T Consensus       163 ~~---------------------~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~~~~~~~~~~~~~~~~~~  221 (256)
T PRK12748        163 DE---------------------LAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGWITEELKHHLVPKFPQGR  221 (256)
T ss_pred             Cc---------------------hHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCCCChhHHHhhhccCCCCC
Confidence            22                     23999998888776666543   3699999999999887533110            


Q ss_pred             CccHHHHHHHHcCCCCCCCCCchhhhhhhhhcccee
Q 025755          202 NTSSLLLLGFLKGFFFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       202 ~~~~~~~~~~~~~~~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                      ...+..+.....  ++..+...+++|+++++|||.+
T Consensus       222 ~~~~~~~a~~~~--~l~~~~~~~~~g~~~~~d~g~~  255 (256)
T PRK12748        222 VGEPVDAARLIA--FLVSEEAKWITGQVIHSEGGFS  255 (256)
T ss_pred             CcCHHHHHHHHH--HHhCcccccccCCEEEecCCcc
Confidence            011222222221  5666777899999999999964

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=99.95  E-value=9.7e-27  Score=196.73  Aligned_cols=219  Identities=29%  Similarity=0.369  Sum_probs=160.9

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEEccc
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFHVAC   86 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~~ag   86 (248)
                      |+|+||||+|+||+++++.|+++|++|++++|+.....     .+.  ...+.++.+|++|.+++.++++++|+|||+|+
T Consensus         1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~-----~~~--~~~~~~~~~D~~~~~~l~~~~~~~d~vi~~a~   73 (328)
T TIGR03466         1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRR-----NLE--GLDVEIVEGDLRDPASLRKAVAGCRALFHVAA   73 (328)
T ss_pred             CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCcccc-----ccc--cCCceEEEeeCCCHHHHHHHHhCCCEEEEece
Confidence            47999999999999999999999999999999764211     111  23588899999999999999999999999998


Q ss_pred             cCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccccchHHHHH
Q 025755           87 PVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAK  166 (248)
Q Consensus        87 ~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK  166 (248)
                      ....  ....+..++++|+.++.++++++.+.+.+++|++||...+.....   ..+++|+.+..+..   ..+.|+.+|
T Consensus        74 ~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~---~~~~~e~~~~~~~~---~~~~Y~~sK  145 (328)
T TIGR03466        74 DYRL--WAPDPEEMYAANVEGTRNLLRAALEAGVERVVYTSSVATLGVRGD---GTPADETTPSSLDD---MIGHYKRSK  145 (328)
T ss_pred             eccc--CCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEechhhcCcCCC---CCCcCccCCCCccc---ccChHHHHH
Confidence            6432  123456789999999999999999998899999999765432221   45667776654422   123599999


Q ss_pred             HHHHHHHHHHHHhCCccEEEEccCeeecCCCCCCCCccHHHHHHHHcCCCCCCCCCchhhhhhhhhccceeEEEeecc
Q 025755          167 TIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKGFFFTTPSHSYMLERTLVLNQGVRLYRCKIQ  244 (248)
Q Consensus       167 ~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~l~vd~g~~~~~~~~~  244 (248)
                      .++|.++++++.+++++++++||+.+|||..... ......+.....+........+   .+.++++|-..++..++.
T Consensus       146 ~~~e~~~~~~~~~~~~~~~ilR~~~~~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~---~~~i~v~D~a~a~~~~~~  219 (328)
T TIGR03466       146 FLAEQAALEMAAEKGLPVVIVNPSTPIGPRDIKP-TPTGRIIVDFLNGKMPAYVDTG---LNLVHVDDVAEGHLLALE  219 (328)
T ss_pred             HHHHHHHHHHHHhcCCCEEEEeCCccCCCCCCCC-CcHHHHHHHHHcCCCceeeCCC---cceEEHHHHHHHHHHHHh
Confidence            9999999999988789999999999999975432 1223344444444433222221   246778777665554443

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PRK12939 short chain dehydrogenase; Provisional

Probab=99.95  E-value=1.7e-26  Score=188.07  Aligned_cols=213  Identities=18%  Similarity=0.137  Sum_probs=154.4

Q ss_pred             CCCCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC----
Q 025755            1 MSGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA----   76 (248)
Q Consensus         1 m~~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~----   76 (248)
                      |+.+++|+++||||+|+||+++++.|+++|++|++++|+..+. ....+.+.....++.++.+|++|.++++++++    
T Consensus         2 ~~~~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   80 (250)
T PRK12939          2 ASNLAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEA-RELAAALEAAGGRAHAIAADLADPASVQRFFDAAAA   80 (250)
T ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHH-HHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            4557789999999999999999999999999999998876422 22223333334578999999999999888774    


Q ss_pred             ---CCCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHHhc----CCCEEEEEeccceeccCCCCCCCCccC
Q 025755           77 ---GCTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCVKA----KVKRVVVVSSIGAVMLNPNWPKGQVMD  145 (248)
Q Consensus        77 ---~id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~~~----~~~~iV~vSS~~~~~~~~~~~~~~~~~  145 (248)
                         ++|+||||+|.......    .+.+...++.|+.++.++++++.+.    +.+++|++||..+..+.+...      
T Consensus        81 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~------  154 (250)
T PRK12939         81 ALGGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALWGAPKLG------  154 (250)
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhccCCCCcc------
Confidence               58999999997654321    2234567889999999998887653    457999999977665554322      


Q ss_pred             CCCCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCCCccHHHHHHHHcCC-------
Q 025755          146 EECWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKGF-------  215 (248)
Q Consensus       146 e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~~~-------  215 (248)
                                     .|+.+|.+.+.+++.++.+   .++++++++||.+.++.......  ..+......+.       
T Consensus       155 ---------------~y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~  217 (250)
T PRK12939        155 ---------------AYVASKGAVIGMTRSLARELGGRGITVNAIAPGLTATEATAYVPA--DERHAYYLKGRALERLQV  217 (250)
T ss_pred             ---------------hHHHHHHHHHHHHHHHHHHHhhhCEEEEEEEECCCCCccccccCC--hHHHHHHHhcCCCCCCCC
Confidence                           2999999888877776643   36999999999999987543211  01111111111       


Q ss_pred             ---------CCCCCCCchhhhhhhhhcccee
Q 025755          216 ---------FFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       216 ---------~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                               ++......+++|+.+.+|||..
T Consensus       218 ~~dva~~~~~l~~~~~~~~~G~~i~~~gg~~  248 (250)
T PRK12939        218 PDDVAGAVLFLLSDAARFVTGQLLPVNGGFV  248 (250)
T ss_pred             HHHHHHHHHHHhCccccCccCcEEEECCCcc
Confidence                     3344456789999999999954

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=99.95  E-value=4.8e-27  Score=192.62  Aligned_cols=208  Identities=18%  Similarity=0.084  Sum_probs=143.3

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-------CCC
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-------GCT   79 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-------~id   79 (248)
                      |+++||||+++||++++++|+++|++|++++|+... .....+.+.. .+++.++.+|++|.++++++++       ++|
T Consensus         1 m~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~-~~~~~~~l~~-~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id   78 (259)
T PRK08340          1 MNVLVTASSRGIGFNVARELLKKGARVVISSRNEEN-LEKALKELKE-YGEVYAVKADLSDKDDLKNLVKEAWELLGGID   78 (259)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHH-HHHHHHHHHh-cCCceEEEcCCCCHHHHHHHHHHHHHhcCCCC
Confidence            489999999999999999999999999999998642 2222333322 2468889999999999888774       589


Q ss_pred             EEEEccccCCCC--C----CCCccccchhhhHHHHHHHHHH----HH-hcCCCEEEEEeccceeccCCCCCCCCccCCCC
Q 025755           80 GVFHVACPVPVG--K----VPNPEVQLIDPAVVGTKNVLNS----CV-KAKVKRVVVVSSIGAVMLNPNWPKGQVMDEEC  148 (248)
Q Consensus        80 ~vi~~ag~~~~~--~----~~~~~~~~~~~n~~g~~~~~~~----~~-~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~  148 (248)
                      +||||||.....  .    ..+++.+.+++|+.++..+.+.    +. +.+.++||++||..+..+.+..          
T Consensus        79 ~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~~~~~~----------  148 (259)
T PRK08340         79 ALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKEPMPPL----------  148 (259)
T ss_pred             EEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCCCCCCc----------
Confidence            999999974321  1    1223445678888876555444    33 2345799999998765444332          


Q ss_pred             CCchhhhccccchHHHHHHHHHHHHHHHHHhC---CccEEEEccCeeecCCCCCCC--------CccHH-----HHHHHH
Q 025755          149 WSDEEFCKATENYYCLAKTIAEIQALEYAKRG---ELDIVTVCPSIVIGPMLQPTI--------NTSSL-----LLLGFL  212 (248)
Q Consensus       149 ~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~---~i~v~~vrpg~i~g~~~~~~~--------~~~~~-----~~~~~~  212 (248)
                                 ..|+.+|+..+.+.+.++.++   |++|++|+||.+.+|+.....        .....     ...+..
T Consensus       149 -----------~~y~~sKaa~~~~~~~la~e~~~~gI~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p  217 (259)
T PRK08340        149 -----------VLADVTRAGLVQLAKGVSRTYGGKGIRAYTVLLGSFDTPGARENLARIAEERGVSFEETWEREVLERTP  217 (259)
T ss_pred             -----------hHHHHHHHHHHHHHHHHHHHhCCCCEEEEEeccCcccCccHHHHHHhhhhccCCchHHHHHHHHhccCC
Confidence                       239999975555555555432   699999999999998643110        00011     111111


Q ss_pred             cCC------------CCCCCCCchhhhhhhhhcccee
Q 025755          213 KGF------------FFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       213 ~~~------------~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                      .++            |+.++.+.|++|+++.+|||..
T Consensus       218 ~~r~~~p~dva~~~~fL~s~~~~~itG~~i~vdgg~~  254 (259)
T PRK08340        218 LKRTGRWEELGSLIAFLLSENAEYMLGSTIVFDGAMT  254 (259)
T ss_pred             ccCCCCHHHHHHHHHHHcCcccccccCceEeecCCcC
Confidence            111            7888889999999999999965

>PRK07576 short chain dehydrogenase; Provisional

Probab=99.95  E-value=6.9e-27  Score=192.22  Aligned_cols=215  Identities=19%  Similarity=0.148  Sum_probs=149.6

Q ss_pred             CCCCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC----
Q 025755            1 MSGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA----   76 (248)
Q Consensus         1 m~~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~----   76 (248)
                      |+++++|+++||||+|+||++++++|+++|++|++++|+..+. ......+.....++.++.+|++|.++++++++    
T Consensus         4 ~~~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~   82 (264)
T PRK07576          4 MFDFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKV-DAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIAD   82 (264)
T ss_pred             cccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHH
Confidence            4568899999999999999999999999999999999986432 22222333334567889999999998888765    


Q ss_pred             ---CCCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHHhc---CCCEEEEEeccceeccCCCCCCCCccCC
Q 025755           77 ---GCTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCVKA---KVKRVVVVSSIGAVMLNPNWPKGQVMDE  146 (248)
Q Consensus        77 ---~id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~~~---~~~~iV~vSS~~~~~~~~~~~~~~~~~e  146 (248)
                         ++|+||||||.......    .+.+...+++|+.++.++++++.+.   ..++||++||..+..+.+...       
T Consensus        83 ~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss~~~~~~~~~~~-------  155 (264)
T PRK07576         83 EFGPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQISAPQAFVPMPMQA-------  155 (264)
T ss_pred             HcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEEECChhhccCCCCcc-------
Confidence               47999999986433211    2334567899999999999888653   236999999977655444332       


Q ss_pred             CCCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeec-CCCCCC-CC-ccHHHHHH-HHcC-----
Q 025755          147 ECWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIG-PMLQPT-IN-TSSLLLLG-FLKG-----  214 (248)
Q Consensus       147 ~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g-~~~~~~-~~-~~~~~~~~-~~~~-----  214 (248)
                                    .|+.+|...+.+++.++.+   .++++++++||.+.+ +..... .. ........ ...+     
T Consensus       156 --------------~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~pg~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (264)
T PRK07576        156 --------------HVCAAKAGVDMLTRTLALEWGPEGIRVNSIVPGPIAGTEGMARLAPSPELQAAVAQSVPLKRNGTK  221 (264)
T ss_pred             --------------HHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccccCcHHHhhcccCHHHHHHHHhcCCCCCCCCH
Confidence                          3999998766666666543   369999999999874 321110 00 00000000 0001     


Q ss_pred             -------CCCCCCCCchhhhhhhhhcccee
Q 025755          215 -------FFFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       215 -------~~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                             .++..+...+++|+.+.+|||+.
T Consensus       222 ~dva~~~~~l~~~~~~~~~G~~~~~~gg~~  251 (264)
T PRK07576        222 QDIANAALFLASDMASYITGVVLPVDGGWS  251 (264)
T ss_pred             HHHHHHHHHHcChhhcCccCCEEEECCCcc
Confidence                   04555556899999999999975

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=99.95  E-value=1e-26  Score=188.70  Aligned_cols=211  Identities=18%  Similarity=0.214  Sum_probs=150.1

Q ss_pred             CCCCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC----
Q 025755            1 MSGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA----   76 (248)
Q Consensus         1 m~~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~----   76 (248)
                      |+++++|+++||||+|+||+++++.|+++|+.|++.+|+.+.. .......   ..++.++.+|++|.++++++++    
T Consensus         1 ~~~~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~-~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~   76 (245)
T PRK12936          1 MFDLSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKL-EALAAEL---GERVKIFPANLSDRDEVKALGQKAEA   76 (245)
T ss_pred             CcCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHH-HHHHHHh---CCceEEEEccCCCHHHHHHHHHHHHH
Confidence            6778899999999999999999999999999998888765322 1211211   3468889999999999887754    


Q ss_pred             ---CCCEEEEccccCCCCC----CCCccccchhhhHHHHHHHHHHHHh----cCCCEEEEEeccceeccCCCCCCCCccC
Q 025755           77 ---GCTGVFHVACPVPVGK----VPNPEVQLIDPAVVGTKNVLNSCVK----AKVKRVVVVSSIGAVMLNPNWPKGQVMD  145 (248)
Q Consensus        77 ---~id~vi~~ag~~~~~~----~~~~~~~~~~~n~~g~~~~~~~~~~----~~~~~iV~vSS~~~~~~~~~~~~~~~~~  145 (248)
                         ++|+||||||......    ..+.+...+++|+.++.++++++.+    .+.++||++||..+.++.+....     
T Consensus        77 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~-----  151 (245)
T PRK12936         77 DLEGVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVTGNPGQAN-----  151 (245)
T ss_pred             HcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCcCCCCCcc-----
Confidence               5899999999765331    1234567889999999888887653    35679999999877776654333     


Q ss_pred             CCCCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCCCcc---------------HHH
Q 025755          146 EECWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTINTS---------------SLL  207 (248)
Q Consensus       146 e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~~~~---------------~~~  207 (248)
                                      |+.+|...+.+++.++.+   .++++++++||.+.+++........               +..
T Consensus       152 ----------------Y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (245)
T PRK12936        152 ----------------YCASKAGMIGFSKSLAQEIATRNVTVNCVAPGFIESAMTGKLNDKQKEAIMGAIPMKRMGTGAE  215 (245)
T ss_pred             ----------------hHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcCcCchhcccChHHHHHHhcCCCCCCCcCHHH
Confidence                            999998555444444332   2599999999999887643211100               011


Q ss_pred             HHHHHcCCCCCCCCCchhhhhhhhhccceeE
Q 025755          208 LLGFLKGFFFTTPSHSYMLERTLVLNQGVRL  238 (248)
Q Consensus       208 ~~~~~~~~~l~~~~~~~~~g~~l~vd~g~~~  238 (248)
                      +....  .++......+++|+++.+|+|...
T Consensus       216 ia~~~--~~l~~~~~~~~~G~~~~~~~g~~~  244 (245)
T PRK12936        216 VASAV--AYLASSEAAYVTGQTIHVNGGMAM  244 (245)
T ss_pred             HHHHH--HHHcCccccCcCCCEEEECCCccc
Confidence            11111  145555667899999999999653

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.95  E-value=8.8e-27  Score=189.80  Aligned_cols=211  Identities=18%  Similarity=0.134  Sum_probs=150.7

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-------
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-------   76 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-------   76 (248)
                      +++|+++||||+|+||+++++.|+++|++|++++|+..+. ......+.. ..++.++++|+.|.++++++++       
T Consensus         3 ~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~-~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   80 (251)
T PRK07231          3 LEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAA-ERVAAEILA-GGRAIAVAADVSDEADVEAAVAAALERFG   80 (251)
T ss_pred             cCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHHHhc-CCeEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            7889999999999999999999999999999999987432 222222222 3568899999999999988775       


Q ss_pred             CCCEEEEccccCCCCC-----CCCccccchhhhHHHHHHHHHHHHh----cCCCEEEEEeccceeccCCCCCCCCccCCC
Q 025755           77 GCTGVFHVACPVPVGK-----VPNPEVQLIDPAVVGTKNVLNSCVK----AKVKRVVVVSSIGAVMLNPNWPKGQVMDEE  147 (248)
Q Consensus        77 ~id~vi~~ag~~~~~~-----~~~~~~~~~~~n~~g~~~~~~~~~~----~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~  147 (248)
                      .+|+|||+||......     ..+.+...+++|+.++.++++.+.+    .+.++||++||..++.+.+..         
T Consensus        81 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~---------  151 (251)
T PRK07231         81 SVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLRPRPGL---------  151 (251)
T ss_pred             CCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcCCCCCc---------
Confidence            4799999999754321     1234467899999998777777654    466899999998776655432         


Q ss_pred             CCCchhhhccccchHHHHHHHHHHHHHHHHHhC---CccEEEEccCeeecCCCCCCCC-ccHHHHHHHHc----CC----
Q 025755          148 CWSDEEFCKATENYYCLAKTIAEIQALEYAKRG---ELDIVTVCPSIVIGPMLQPTIN-TSSLLLLGFLK----GF----  215 (248)
Q Consensus       148 ~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~---~i~v~~vrpg~i~g~~~~~~~~-~~~~~~~~~~~----~~----  215 (248)
                                  ..|+.+|...+.+++.++.++   ++++++++||.+.+++...... ........+..    ++    
T Consensus       152 ------------~~y~~sk~~~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (251)
T PRK07231        152 ------------GWYNASKGAVITLTKALAAELGPDKIRVNAVAPVVVETGLLEAFMGEPTPENRAKFLATIPLGRLGTP  219 (251)
T ss_pred             ------------hHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEECccCCCcchhhhcccChHHHHHHhcCCCCCCCcCH
Confidence                        239999987766666665432   6999999999999886443211 00111111111    11    


Q ss_pred             --------CCCCCCCchhhhhhhhhcccee
Q 025755          216 --------FFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       216 --------~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                              ++..+...+++|+.+.+|||..
T Consensus       220 ~dva~~~~~l~~~~~~~~~g~~~~~~gg~~  249 (251)
T PRK07231        220 EDIANAALFLASDEASWITGVTLVVDGGRC  249 (251)
T ss_pred             HHHHHHHHHHhCccccCCCCCeEEECCCcc
Confidence                    4455556789999999999853

>PRK05884 short chain dehydrogenase; Provisional

Probab=99.95  E-value=9.4e-27  Score=186.80  Aligned_cols=198  Identities=16%  Similarity=0.081  Sum_probs=142.6

Q ss_pred             EEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC----CCCEEEE
Q 025755            8 RVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA----GCTGVFH   83 (248)
Q Consensus         8 ~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~----~id~vi~   83 (248)
                      +++||||+|+||+++++.|+++|++|++++|+.++. ....+.     .++.++++|++|.++++++++    ++|++||
T Consensus         2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~-~~~~~~-----~~~~~~~~D~~~~~~v~~~~~~~~~~id~lv~   75 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDL-EVAAKE-----LDVDAIVCDNTDPASLEEARGLFPHHLDTIVN   75 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHh-----ccCcEEecCCCCHHHHHHHHHHHhhcCcEEEE
Confidence            699999999999999999999999999999875321 111111     135688999999999888775    5899999


Q ss_pred             ccccCCC----C-----CCCCccccchhhhHHHHHHHHHHHHhc--CCCEEEEEeccceeccCCCCCCCCccCCCCCCch
Q 025755           84 VACPVPV----G-----KVPNPEVQLIDPAVVGTKNVLNSCVKA--KVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDE  152 (248)
Q Consensus        84 ~ag~~~~----~-----~~~~~~~~~~~~n~~g~~~~~~~~~~~--~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~  152 (248)
                      |||....    .     +..++|...+++|+.++.++++++.+.  ..++||++||..    .+...             
T Consensus        76 ~ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~Iv~isS~~----~~~~~-------------  138 (223)
T PRK05884         76 VPAPSWDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRSGGSIISVVPEN----PPAGS-------------  138 (223)
T ss_pred             CCCccccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEEEEecCC----CCCcc-------------
Confidence            9985211    0     123456788999999999999998764  347999999864    11112             


Q ss_pred             hhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCC---CCccHHHHHHHHcCCCCCCCCCchhh
Q 025755          153 EFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPT---INTSSLLLLGFLKGFFFTTPSHSYML  226 (248)
Q Consensus       153 ~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~  226 (248)
                              .|+.||+..+.+++.++.+   .+++|++|+||.+.+++....   +...+..+.....  |+.++.+.|++
T Consensus       139 --------~Y~asKaal~~~~~~la~e~~~~gI~v~~v~PG~v~t~~~~~~~~~p~~~~~~ia~~~~--~l~s~~~~~v~  208 (223)
T PRK05884        139 --------AEAAIKAALSNWTAGQAAVFGTRGITINAVACGRSVQPGYDGLSRTPPPVAAEIARLAL--FLTTPAARHIT  208 (223)
T ss_pred             --------ccHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccCchhhhhccCCCCCCHHHHHHHHH--HHcCchhhccC
Confidence                    2999997555544444432   359999999999998853211   1112222333322  77888899999


Q ss_pred             hhhhhhccceeE
Q 025755          227 ERTLVLNQGVRL  238 (248)
Q Consensus       227 g~~l~vd~g~~~  238 (248)
                      |+++.+|||+.+
T Consensus       209 G~~i~vdgg~~~  220 (223)
T PRK05884        209 GQTLHVSHGALA  220 (223)
T ss_pred             CcEEEeCCCeec
Confidence            999999999764

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=99.95  E-value=1.1e-26  Score=197.53  Aligned_cols=228  Identities=18%  Similarity=0.112  Sum_probs=158.7

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcC-CCCCeEEEEccCCCHHHHHHHhC--CCCEEEE
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEG-ASENLQLFKTDLLDYEALCAATA--GCTGVFH   83 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Di~d~~~~~~~~~--~id~vi~   83 (248)
                      |+|+||||+|+||+++++.|+++|++|++++|...... .....+.. ...++.++.+|++|.+++.++++  ++|+|||
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vvh   79 (338)
T PRK10675          1 MRVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKR-SVLPVIERLGGKHPTFVEGDIRNEALLTEILHDHAIDTVIH   79 (338)
T ss_pred             CeEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchH-hHHHHHHHhcCCCceEEEccCCCHHHHHHHHhcCCCCEEEE
Confidence            47999999999999999999999999999876532211 11111111 12357788999999999999886  5899999


Q ss_pred             ccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccccchHH
Q 025755           84 VACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYC  163 (248)
Q Consensus        84 ~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~  163 (248)
                      +|+..........+.+++++|+.++.++++++++.+.+++|++||.. .|+...   ..+++|+++..     .|...|+
T Consensus        80 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~-~yg~~~---~~~~~E~~~~~-----~p~~~Y~  150 (338)
T PRK10675         80 FAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNLIFSSSAT-VYGDQP---KIPYVESFPTG-----TPQSPYG  150 (338)
T ss_pred             CCccccccchhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHH-hhCCCC---CCccccccCCC-----CCCChhH
Confidence            99876533222334678999999999999999999989999999965 554322   45677776641     2345699


Q ss_pred             HHHHHHHHHHHHHHHhC-CccEEEEccCeeecCCCCCC--------CCccHHHHHHHHcCC--CCCCC------CCchhh
Q 025755          164 LAKTIAEIQALEYAKRG-ELDIVTVCPSIVIGPMLQPT--------INTSSLLLLGFLKGF--FFTTP------SHSYML  226 (248)
Q Consensus       164 ~sK~~~e~l~~~~~~~~-~i~v~~vrpg~i~g~~~~~~--------~~~~~~~~~~~~~~~--~l~~~------~~~~~~  226 (248)
                      .+|..+|.++..++..+ +++++++||+++|||.....        ......++.++..+.  .+...      .++...
T Consensus       151 ~sK~~~E~~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  230 (338)
T PRK10675        151 KSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGV  230 (338)
T ss_pred             HHHHHHHHHHHHHHHhcCCCcEEEEEeeeecCCCcccccccCCCCChhHHHHHHHHHHhcCCCceEEeCCcCCCCCCcEE
Confidence            99999999999987653 69999999999999742111        011223344444332  11111      123344


Q ss_pred             hhhhhhccceeEEEeecc
Q 025755          227 ERTLVLNQGVRLYRCKIQ  244 (248)
Q Consensus       227 g~~l~vd~g~~~~~~~~~  244 (248)
                      .+.++++|...++..+++
T Consensus       231 ~~~v~v~D~a~~~~~~~~  248 (338)
T PRK10675        231 RDYIHVMDLADGHVAAME  248 (338)
T ss_pred             EeeEEHHHHHHHHHHHHH
Confidence            568899888766555443

>PRK06125 short chain dehydrogenase; Provisional

Probab=99.95  E-value=2.2e-26  Score=188.64  Aligned_cols=214  Identities=15%  Similarity=0.115  Sum_probs=150.7

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcC-CCCCeEEEEccCCCHHHHHHHhC---CCC
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEG-ASENLQLFKTDLLDYEALCAATA---GCT   79 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Di~d~~~~~~~~~---~id   79 (248)
                      +++|+++|||++|+||+++++.|+++|++|++++|+..+. ....+.+.. ...++.++.+|++|.++++.+++   .+|
T Consensus         5 ~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~-~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id   83 (259)
T PRK06125          5 LAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADAL-EALAADLRAAHGVDVAVHALDLSSPEAREQLAAEAGDID   83 (259)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHH-HHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHhCCCC
Confidence            6889999999999999999999999999999999986422 222222322 13468899999999999888765   589


Q ss_pred             EEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHH----hcCCCEEEEEeccceeccCCCCCCCCccCCCCCCc
Q 025755           80 GVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCV----KAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSD  151 (248)
Q Consensus        80 ~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~----~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~  151 (248)
                      ++|||||.......    .+.+...+++|+.+...+++++.    +.+.++||++||..+..+.+.+.            
T Consensus        84 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~------------  151 (259)
T PRK06125         84 ILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIGAAGENPDADYI------------  151 (259)
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCccccCCCCCch------------
Confidence            99999997543221    23456788999999888877764    33457999999976654433222            


Q ss_pred             hhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCC-------CccHHHHHHH----HcC---
Q 025755          152 EEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTI-------NTSSLLLLGF----LKG---  214 (248)
Q Consensus       152 ~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~-------~~~~~~~~~~----~~~---  214 (248)
                               .|+.+|.+.+.+.+.++.+   .|++|++|+||.+.+|+.....       .........+    ..+   
T Consensus       152 ---------~y~ask~al~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (259)
T PRK06125        152 ---------CGSAGNAALMAFTRALGGKSLDDGVRVVGVNPGPVATDRMLTLLKGRARAELGDESRWQELLAGLPLGRPA  222 (259)
T ss_pred             ---------HhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccHHHHHHHHhhhhcccCCHHHHHHHhccCCcCCCc
Confidence                     2899997666666655432   3699999999999998421100       0000011111    011   


Q ss_pred             ---------CCCCCCCCchhhhhhhhhccceeEE
Q 025755          215 ---------FFFTTPSHSYMLERTLVLNQGVRLY  239 (248)
Q Consensus       215 ---------~~l~~~~~~~~~g~~l~vd~g~~~~  239 (248)
                               .++..+...|++|+.+.+|||....
T Consensus       223 ~~~~va~~~~~l~~~~~~~~~G~~i~vdgg~~~~  256 (259)
T PRK06125        223 TPEEVADLVAFLASPRSGYTSGTVVTVDGGISAR  256 (259)
T ss_pred             CHHHHHHHHHHHcCchhccccCceEEecCCeeec
Confidence                     1677777889999999999997754

>PRK06484 short chain dehydrogenase; Validated

Probab=99.95  E-value=7.5e-27  Score=209.37  Aligned_cols=210  Identities=18%  Similarity=0.191  Sum_probs=152.8

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-------
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-------   76 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-------   76 (248)
                      +.+|+++||||++|||+++++.|+++|++|++++|+... .....+..   ..++..+.+|++|.++++++++       
T Consensus       267 ~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~-~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  342 (520)
T PRK06484        267 ESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEG-AKKLAEAL---GDEHLSVQADITDEAAVESAFAQIQARWG  342 (520)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHHh---CCceeEEEccCCCHHHHHHHHHHHHHHcC
Confidence            468999999999999999999999999999999997532 22222222   3457788999999999888775       


Q ss_pred             CCCEEEEccccCCCC-----CCCCccccchhhhHHHHHHHHHHHHhc--CCCEEEEEeccceeccCCCCCCCCccCCCCC
Q 025755           77 GCTGVFHVACPVPVG-----KVPNPEVQLIDPAVVGTKNVLNSCVKA--KVKRVVVVSSIGAVMLNPNWPKGQVMDEECW  149 (248)
Q Consensus        77 ~id~vi~~ag~~~~~-----~~~~~~~~~~~~n~~g~~~~~~~~~~~--~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~  149 (248)
                      .+|++|||||.....     ...+.+..++++|+.++.++++++.+.  +.++||++||..+..+.+....         
T Consensus       343 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~---------  413 (520)
T PRK06484        343 RLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIASLLALPPRNA---------  413 (520)
T ss_pred             CCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhhcCCCCCCch---------
Confidence            489999999975321     112345778999999999999988764  4579999999887766554333         


Q ss_pred             CchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCCCccHHHHHHHH----cCC-------
Q 025755          150 SDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTINTSSLLLLGFL----KGF-------  215 (248)
Q Consensus       150 ~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~----~~~-------  215 (248)
                                  |+.||+..+.+.+.++.+   .||+||+|+||.+.+++..............+.    .++       
T Consensus       414 ------------Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di  481 (520)
T PRK06484        414 ------------YCASKAAVTMLSRSLACEWAPAGIRVNTVAPGYIETPAVLALKASGRADFDSIRRRIPLGRLGDPEEV  481 (520)
T ss_pred             ------------hHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCchhhhhccccHHHHHHHHhcCCCCCCcCHHHH
Confidence                        999997666665555543   269999999999999875321110011111111    111       


Q ss_pred             -----CCCCCCCchhhhhhhhhccceeE
Q 025755          216 -----FFTTPSHSYMLERTLVLNQGVRL  238 (248)
Q Consensus       216 -----~l~~~~~~~~~g~~l~vd~g~~~  238 (248)
                           ++..+...+++|+++.+|||...
T Consensus       482 a~~~~~l~s~~~~~~~G~~i~vdgg~~~  509 (520)
T PRK06484        482 AEAIAFLASPAASYVNGATLTVDGGWTA  509 (520)
T ss_pred             HHHHHHHhCccccCccCcEEEECCCccC
Confidence                 66677788999999999999753

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.95  E-value=2.3e-26  Score=186.75  Aligned_cols=210  Identities=18%  Similarity=0.182  Sum_probs=151.2

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-------
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-------   76 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-------   76 (248)
                      +++|+++|||++|+||+++++.|+++|++|+++.|+...........+.....++.++.+|++|.+++.++++       
T Consensus         3 ~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   82 (248)
T PRK05557          3 LEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEFG   82 (248)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            7889999999999999999999999999998888876432222223333334678899999999998888765       


Q ss_pred             CCCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHHhc----CCCEEEEEeccceeccCCCCCCCCccCCCC
Q 025755           77 GCTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCVKA----KVKRVVVVSSIGAVMLNPNWPKGQVMDEEC  148 (248)
Q Consensus        77 ~id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~~~----~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~  148 (248)
                      ++|+|||+||.......    .+.+...+++|+.++.++++++.+.    +.+++|++||..+.++.+....        
T Consensus        83 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~~~~~~~~--------  154 (248)
T PRK05557         83 GVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLMGNPGQAN--------  154 (248)
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccCcCCCCCch--------
Confidence            57999999997654322    1234567889999999998888754    5578999999877666543333        


Q ss_pred             CCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCCCccHHHHHHHHcC-----------
Q 025755          149 WSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKG-----------  214 (248)
Q Consensus       149 ~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~~-----------  214 (248)
                                   |+.+|...+.+++.++.+   .++++++++||.+.++......   ..+.......           
T Consensus       155 -------------y~~sk~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~  218 (248)
T PRK05557        155 -------------YAASKAGVIGFTKSLARELASRGITVNAVAPGFIETDMTDALP---EDVKEAILAQIPLGRLGQPEE  218 (248)
T ss_pred             -------------hHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccCCccccccC---hHHHHHHHhcCCCCCCcCHHH
Confidence                         999998777766666543   2699999999999887644321   1111111110           


Q ss_pred             -----CCCCCCCCchhhhhhhhhcccee
Q 025755          215 -----FFFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       215 -----~~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                           .++......+++|+++++|||.+
T Consensus       219 va~~~~~l~~~~~~~~~g~~~~i~~~~~  246 (248)
T PRK05557        219 IASAVAFLASDEAAYITGQTLHVNGGMV  246 (248)
T ss_pred             HHHHHHHHcCcccCCccccEEEecCCcc
Confidence                 03344445788999999999865

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.95  E-value=2e-26  Score=188.43  Aligned_cols=173  Identities=18%  Similarity=0.102  Sum_probs=131.9

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-------
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-------   76 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-------   76 (248)
                      +++|+++||||+|+||++++++|+++|++|++++|+.... ......+.....++.++.+|++|.++++++++       
T Consensus         2 ~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   80 (258)
T PRK12429          2 LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAA-AAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFG   80 (258)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHH-HHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            5679999999999999999999999999999999986432 22223333334678899999999999888776       


Q ss_pred             CCCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHH----HhcCCCEEEEEeccceeccCCCCCCCCccCCCC
Q 025755           77 GCTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSC----VKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEEC  148 (248)
Q Consensus        77 ~id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~----~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~  148 (248)
                      .+|+||||||.......    .+.+...+++|+.++.++++.+    ++.+.++||++||..++++.+....        
T Consensus        81 ~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~--------  152 (258)
T PRK12429         81 GVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGLVGSAGKAA--------  152 (258)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhccCCCCcch--------
Confidence            57999999997654322    1233557789999965555554    4557789999999877766544333        


Q ss_pred             CCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCC
Q 025755          149 WSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQ  198 (248)
Q Consensus       149 ~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~  198 (248)
                                   |+.+|++.+.+++.++.+   .++++++++||.+++|...
T Consensus       153 -------------y~~~k~a~~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~  192 (258)
T PRK12429        153 -------------YVSAKHGLIGLTKVVALEGATHGVTVNAICPGYVDTPLVR  192 (258)
T ss_pred             -------------hHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCcchhhh
Confidence                         999998777777766553   3699999999999998643

>PRK05876 short chain dehydrogenase; Provisional

Probab=99.95  E-value=1.7e-26  Score=190.90  Aligned_cols=175  Identities=19%  Similarity=0.171  Sum_probs=136.5

Q ss_pred             CCCCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC----
Q 025755            1 MSGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA----   76 (248)
Q Consensus         1 m~~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~----   76 (248)
                      |..+++|+++||||+||||+++++.|+++|++|++.+|+.+. .....+.+.....++.++.+|++|.+++.++++    
T Consensus         1 ~~~~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~-l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~   79 (275)
T PRK05876          1 MDGFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPG-LRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFR   79 (275)
T ss_pred             CCCcCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHH
Confidence            677899999999999999999999999999999999988643 233333443334568889999999999888775    


Q ss_pred             ---CCCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHHh----cC-CCEEEEEeccceeccCCCCCCCCcc
Q 025755           77 ---GCTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCVK----AK-VKRVVVVSSIGAVMLNPNWPKGQVM  144 (248)
Q Consensus        77 ---~id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~~----~~-~~~iV~vSS~~~~~~~~~~~~~~~~  144 (248)
                         ++|+||||||.......    .+.++..+++|+.++.++++++.+    .+ .++||++||..++.+.+....    
T Consensus        80 ~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~~~~~~~----  155 (275)
T PRK05876         80 LLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVPNAGLGA----  155 (275)
T ss_pred             HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccCCCCCch----
Confidence               47999999997543322    233466789999999998888764    33 579999999877665544333    


Q ss_pred             CCCCCCchhhhccccchHHHHHH----HHHHHHHHHHHhCCccEEEEccCeeecCCCC
Q 025755          145 DEECWSDEEFCKATENYYCLAKT----IAEIQALEYAKRGELDIVTVCPSIVIGPMLQ  198 (248)
Q Consensus       145 ~e~~~~~~~~~~~~~~~Y~~sK~----~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~  198 (248)
                                       |+.||.    ++|.++.++..+ |+++++++||.+.+++..
T Consensus       156 -----------------Y~asK~a~~~~~~~l~~e~~~~-gi~v~~v~Pg~v~t~~~~  195 (275)
T PRK05876        156 -----------------YGVAKYGVVGLAETLAREVTAD-GIGVSVLCPMVVETNLVA  195 (275)
T ss_pred             -----------------HHHHHHHHHHHHHHHHHHhhhc-CcEEEEEEeCcccccccc
Confidence                             999997    577777777654 599999999999998643

>PRK08703 short chain dehydrogenase; Provisional

Probab=99.95  E-value=3.2e-26  Score=185.51  Aligned_cols=208  Identities=13%  Similarity=0.063  Sum_probs=145.2

Q ss_pred             CCCCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcC-CCCCeEEEEccCCC--HHHHHHHh--
Q 025755            1 MSGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEG-ASENLQLFKTDLLD--YEALCAAT--   75 (248)
Q Consensus         1 m~~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Di~d--~~~~~~~~--   75 (248)
                      |..|++|+++||||+|+||+++++.|+++|++|++++|+.... ......+.. ....+.++.+|+.|  .+++.+++  
T Consensus         1 ~~~l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~-~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   79 (239)
T PRK08703          1 MATLSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKL-EKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAAT   79 (239)
T ss_pred             CCCCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHH-HHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHH
Confidence            6778899999999999999999999999999999999987432 222222222 22356788899975  34444433  


Q ss_pred             ------CCCCEEEEccccCCCCC-----CCCccccchhhhHHHHHHHHHHHHh----cCCCEEEEEeccceeccCCCCCC
Q 025755           76 ------AGCTGVFHVACPVPVGK-----VPNPEVQLIDPAVVGTKNVLNSCVK----AKVKRVVVVSSIGAVMLNPNWPK  140 (248)
Q Consensus        76 ------~~id~vi~~ag~~~~~~-----~~~~~~~~~~~n~~g~~~~~~~~~~----~~~~~iV~vSS~~~~~~~~~~~~  140 (248)
                            ..+|+||||||......     ..+.+...+++|+.++.++++++.+    .+.+++|++||..+..+.+....
T Consensus        80 i~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~  159 (239)
T PRK08703         80 IAEATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGETPKAYWGG  159 (239)
T ss_pred             HHHHhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEeccccccCCCCccc
Confidence                  46899999999753211     1123456789999998888887754    35579999999766555443333


Q ss_pred             CCccCCCCCCchhhhccccchHHHHHHHHHHHHHHHHHhC----CccEEEEccCeeecCCCCCC-CCc------cHHHHH
Q 025755          141 GQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKRG----ELDIVTVCPSIVIGPMLQPT-INT------SSLLLL  209 (248)
Q Consensus       141 ~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~----~i~v~~vrpg~i~g~~~~~~-~~~------~~~~~~  209 (248)
                                           |+.||++.+.+++.++.+.    +++|++|+||.+++|+.... ...      ...-+.
T Consensus       160 ---------------------Y~~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~  218 (239)
T PRK08703        160 ---------------------FGASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQRIKSHPGEAKSERKSYGDVL  218 (239)
T ss_pred             ---------------------hHHhHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCccccccCCCCCccccCCHHHHH
Confidence                                 9999988777777766543    59999999999999974321 111      011111


Q ss_pred             HHHcCCCCCCCCCchhhhhhhhh
Q 025755          210 GFLKGFFFTTPSHSYMLERTLVL  232 (248)
Q Consensus       210 ~~~~~~~l~~~~~~~~~g~~l~v  232 (248)
                      ...  .++..+.+.++||++|.|
T Consensus       219 ~~~--~~~~~~~~~~~~g~~~~~  239 (239)
T PRK08703        219 PAF--VWWASAESKGRSGEIVYL  239 (239)
T ss_pred             HHH--HHHhCccccCcCCeEeeC
Confidence            111  167778899999998865

>PRK07806 short chain dehydrogenase; Provisional

Probab=99.95  E-value=4.1e-26  Score=185.74  Aligned_cols=221  Identities=15%  Similarity=0.045  Sum_probs=151.1

Q ss_pred             CCCCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC----
Q 025755            1 MSGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA----   76 (248)
Q Consensus         1 m~~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~----   76 (248)
                      |+++++|+++||||+||||+++++.|+++|++|++++|+..+........+.....++.++.+|++|.+++.++++    
T Consensus         1 ~~~~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   80 (248)
T PRK07806          1 MGDLPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTARE   80 (248)
T ss_pred             CCCCCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            6678889999999999999999999999999999999875322222222233334568899999999999887765    


Q ss_pred             ---CCCEEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhc--CCCEEEEEeccceeccCCCCCCCCccCCCCCCc
Q 025755           77 ---GCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKA--KVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSD  151 (248)
Q Consensus        77 ---~id~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~--~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~  151 (248)
                         ++|+||||||.....  ...+...+++|+.++.++++++.+.  ..++||++||..+.....        .+..+. 
T Consensus        81 ~~~~~d~vi~~ag~~~~~--~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~--------~~~~~~-  149 (248)
T PRK07806         81 EFGGLDALVLNASGGMES--GMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQAHFIPT--------VKTMPE-  149 (248)
T ss_pred             hCCCCcEEEECCCCCCCC--CCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchhhcCcc--------ccCCcc-
Confidence               589999999864322  2345678899999999999999875  346999999954322110        000010 


Q ss_pred             hhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCC-CCccHHHHHH--HHcCC----------
Q 025755          152 EEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPT-INTSSLLLLG--FLKGF----------  215 (248)
Q Consensus       152 ~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~-~~~~~~~~~~--~~~~~----------  215 (248)
                             ..+|+.||+..|.+++.++.+   .++++++++||.+.++..... ....+.....  ...++          
T Consensus       150 -------~~~Y~~sK~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  222 (248)
T PRK07806        150 -------YEPVARSKRAGEDALRALRPELAEKGIGFVVVSGDMIEGTVTATLLNRLNPGAIEARREAAGKLYTVSEFAAE  222 (248)
T ss_pred             -------ccHHHHHHHHHHHHHHHHHHHhhccCeEEEEeCCccccCchhhhhhccCCHHHHHHHHhhhcccCCHHHHHHH
Confidence                   234999999888888877653   369999999999888753211 0001111100  00111          


Q ss_pred             CCCCCCCchhhhhhhhhccceeEE
Q 025755          216 FFTTPSHSYMLERTLVLNQGVRLY  239 (248)
Q Consensus       216 ~l~~~~~~~~~g~~l~vd~g~~~~  239 (248)
                      .+....+.+.+|++++++|+....
T Consensus       223 ~~~l~~~~~~~g~~~~i~~~~~~~  246 (248)
T PRK07806        223 VARAVTAPVPSGHIEYVGGADYFL  246 (248)
T ss_pred             HHHHhhccccCccEEEecCcccee
Confidence            111223568899999999987643

>PRK07831 short chain dehydrogenase; Provisional

Probab=99.95  E-value=4.3e-26  Score=187.21  Aligned_cols=208  Identities=18%  Similarity=0.097  Sum_probs=150.2

Q ss_pred             CCCcEEEEEcCcc-HHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcC-C-CCCeEEEEccCCCHHHHHHHhC----
Q 025755            4 EDKERVCVTGAGG-YIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEG-A-SENLQLFKTDLLDYEALCAATA----   76 (248)
Q Consensus         4 l~~k~vlVtG~~g-~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~-~-~~~~~~~~~Di~d~~~~~~~~~----   76 (248)
                      +++|+++||||+| +||+++++.|+++|++|++++|+..+. ....+.+.. . ..++.++++|++|.++++++++    
T Consensus        15 ~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   93 (262)
T PRK07831         15 LAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRL-GETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVE   93 (262)
T ss_pred             cCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHH-HHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            5689999999996 899999999999999999999876422 222232322 1 2368899999999998887765    


Q ss_pred             ---CCCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHHhc----C-CCEEEEEeccceeccCCCCCCCCcc
Q 025755           77 ---GCTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCVKA----K-VKRVVVVSSIGAVMLNPNWPKGQVM  144 (248)
Q Consensus        77 ---~id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~~~----~-~~~iV~vSS~~~~~~~~~~~~~~~~  144 (248)
                         ++|+||||||.......    .+.+...+++|+.++..+++++.+.    + .++||++||..+..+.+....    
T Consensus        94 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~----  169 (262)
T PRK07831         94 RLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWRAQHGQAH----  169 (262)
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCCCcc----
Confidence               57999999997543321    2345678899999998888877542    3 579999999766554433333    


Q ss_pred             CCCCCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCCCccHHHHHHHHc----CC--
Q 025755          145 DEECWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLK----GF--  215 (248)
Q Consensus       145 ~e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~----~~--  215 (248)
                                       |+.+|++.+.+++.++.+   ++++|++|+||.+++|+.....  .......+..    ++  
T Consensus       170 -----------------Y~~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~~~--~~~~~~~~~~~~~~~r~~  230 (262)
T PRK07831        170 -----------------YAAAKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLAKVT--SAELLDELAAREAFGRAA  230 (262)
T ss_pred             -----------------hHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCccccccc--CHHHHHHHHhcCCCCCCc
Confidence                             999998777777766644   4699999999999999754211  1111211111    11  


Q ss_pred             ----------CCCCCCCchhhhhhhhhccc
Q 025755          216 ----------FFTTPSHSYMLERTLVLNQG  235 (248)
Q Consensus       216 ----------~l~~~~~~~~~g~~l~vd~g  235 (248)
                                ++.++.+.|++|+++.+|++
T Consensus       231 ~p~~va~~~~~l~s~~~~~itG~~i~v~~~  260 (262)
T PRK07831        231 EPWEVANVIAFLASDYSSYLTGEVVSVSSQ  260 (262)
T ss_pred             CHHHHHHHHHHHcCchhcCcCCceEEeCCC
Confidence                      67777788999999999985

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=99.95  E-value=3.9e-26  Score=187.11  Aligned_cols=211  Identities=12%  Similarity=0.086  Sum_probs=146.5

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCC--CCCeEEEEccCCCHHHHHHHhC-------
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGA--SENLQLFKTDLLDYEALCAATA-------   76 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Di~d~~~~~~~~~-------   76 (248)
                      +|+++||||+|+||+++++.|+++|++|++++|+..... .....+...  ..++.++.+|++|.+++.++++       
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   80 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAA-NVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFG   80 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            589999999999999999999999999999999864322 222222221  1468899999999988887764       


Q ss_pred             CCCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHHh----cC-CCEEEEEeccceeccCCCCCCCCccCCC
Q 025755           77 GCTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCVK----AK-VKRVVVVSSIGAVMLNPNWPKGQVMDEE  147 (248)
Q Consensus        77 ~id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~~----~~-~~~iV~vSS~~~~~~~~~~~~~~~~~e~  147 (248)
                      .+|+||||||.......    .+.+...+++|+.++.++++++.+    .+ .++||++||..+.++.+...        
T Consensus        81 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~~~~~~--------  152 (259)
T PRK12384         81 RVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSKHNS--------  152 (259)
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccCCCCCc--------
Confidence            57999999997654322    233456789999998877777654    34 46999999976655543322        


Q ss_pred             CCCchhhhccccchHHHHHHHHHHHHHHHHH---hCCccEEEEccCeeecCCCCCC-CC--------ccHHHHHHHH---
Q 025755          148 CWSDEEFCKATENYYCLAKTIAEIQALEYAK---RGELDIVTVCPSIVIGPMLQPT-IN--------TSSLLLLGFL---  212 (248)
Q Consensus       148 ~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~---~~~i~v~~vrpg~i~g~~~~~~-~~--------~~~~~~~~~~---  212 (248)
                                   .|+.||++.+.+++.++.   ..|+++++++||.++++..... .+        ..........   
T Consensus       153 -------------~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (259)
T PRK12384        153 -------------GYSAAKFGGVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQSLLPQYAKKLGIKPDEVEQYYIDKV  219 (259)
T ss_pred             -------------hhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCcccchhhhhhhHHHHHhcCCChHHHHHHHHHhC
Confidence                         399999876666555553   2469999999998876543211 00        0011111111   


Q ss_pred             -cCC------------CCCCCCCchhhhhhhhhccceeE
Q 025755          213 -KGF------------FFTTPSHSYMLERTLVLNQGVRL  238 (248)
Q Consensus       213 -~~~------------~l~~~~~~~~~g~~l~vd~g~~~  238 (248)
                       .++            ++.+....+++|+++.+|||...
T Consensus       220 ~~~~~~~~~dv~~~~~~l~~~~~~~~~G~~~~v~~g~~~  258 (259)
T PRK12384        220 PLKRGCDYQDVLNMLLFYASPKASYCTGQSINVTGGQVM  258 (259)
T ss_pred             cccCCCCHHHHHHHHHHHcCcccccccCceEEEcCCEEe
Confidence             111            56666678999999999999864

>PRK06483 dihydromonapterin reductase; Provisional

Probab=99.95  E-value=2.9e-26  Score=185.37  Aligned_cols=202  Identities=16%  Similarity=0.169  Sum_probs=142.1

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-------CC
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-------GC   78 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-------~i   78 (248)
                      +|+++||||+|+||+++++.|+++|++|++++|+..+.. ....   .  ..+.++.+|++|.++++++++       ++
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~-~~~~---~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   75 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAI-DGLR---Q--AGAQCIQADFSTNAGIMAFIDELKQHTDGL   75 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHH-HHHH---H--cCCEEEEcCCCCHHHHHHHHHHHHhhCCCc
Confidence            579999999999999999999999999999999864321 1111   1  136788999999998877664       48


Q ss_pred             CEEEEccccCCCCC----CCCccccchhhhHHHHHHHHHHHHhc----C--CCEEEEEeccceeccCCCCCCCCccCCCC
Q 025755           79 TGVFHVACPVPVGK----VPNPEVQLIDPAVVGTKNVLNSCVKA----K--VKRVVVVSSIGAVMLNPNWPKGQVMDEEC  148 (248)
Q Consensus        79 d~vi~~ag~~~~~~----~~~~~~~~~~~n~~g~~~~~~~~~~~----~--~~~iV~vSS~~~~~~~~~~~~~~~~~e~~  148 (248)
                      |++|||||......    ..+.+...+++|+.++..+.+.+.+.    +  .++||++||..+..+.+.+..        
T Consensus        76 d~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~--------  147 (236)
T PRK06483         76 RAIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEKGSDKHIA--------  147 (236)
T ss_pred             cEEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhccCCCCCcc--------
Confidence            99999999753321    12445678899999988777666542    3  469999999765544443333        


Q ss_pred             CCchhhhccccchHHHHHHHHHHHHHHHHHhC--CccEEEEccCeeecCCCCCCCCccHHHHHHHHcCC-----------
Q 025755          149 WSDEEFCKATENYYCLAKTIAEIQALEYAKRG--ELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKGF-----------  215 (248)
Q Consensus       149 ~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~--~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~~~-----------  215 (248)
                                   |+.||+..+.+++.++.++  ++|||+|+||.+.++..... ........+...++           
T Consensus       148 -------------Y~asKaal~~l~~~~a~e~~~~irvn~v~Pg~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~va~~~  213 (236)
T PRK06483        148 -------------YAASKAALDNMTLSFAAKLAPEVKVNSIAPALILFNEGDDA-AYRQKALAKSLLKIEPGEEEIIDLV  213 (236)
T ss_pred             -------------HHHHHHHHHHHHHHHHHHHCCCcEEEEEccCceecCCCCCH-HHHHHHhccCccccCCCHHHHHHHH
Confidence                         9999988877777777653  49999999999876532110 00000000000000           


Q ss_pred             -CCCCCCCchhhhhhhhhcccee
Q 025755          216 -FFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       216 -~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                       |+..  +.|++|+++.+|||..
T Consensus       214 ~~l~~--~~~~~G~~i~vdgg~~  234 (236)
T PRK06483        214 DYLLT--SCYVTGRSLPVDGGRH  234 (236)
T ss_pred             HHHhc--CCCcCCcEEEeCcccc
Confidence             4443  6899999999999965

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=99.95  E-value=4.6e-27  Score=197.41  Aligned_cols=212  Identities=18%  Similarity=0.156  Sum_probs=147.8

Q ss_pred             EEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCH---HH-HHHHhC-----CCC
Q 025755            9 VCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDY---EA-LCAATA-----GCT   79 (248)
Q Consensus         9 vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~---~~-~~~~~~-----~id   79 (248)
                      |+||||+|+||++++++|+++|++++++.|+......  .         ..+.++|+.|.   ++ ++++++     ++|
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~--~---------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~d   70 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--F---------VNLVDLDIADYMDKEDFLAQIMAGDDFGDIE   70 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchH--H---------HhhhhhhhhhhhhHHHHHHHHhcccccCCcc
Confidence            7999999999999999999999987777665432111  0         01223455543   33 333332     689


Q ss_pred             EEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhcccc
Q 025755           80 GVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATE  159 (248)
Q Consensus        80 ~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~  159 (248)
                      +|||+||...... . ....+++.|+.++.+++++|++.+. ++||+||.. +|+...   ..+++|+.+..|      .
T Consensus        71 ~Vih~A~~~~~~~-~-~~~~~~~~n~~~t~~ll~~~~~~~~-~~i~~SS~~-vyg~~~---~~~~~E~~~~~p------~  137 (308)
T PRK11150         71 AIFHEGACSSTTE-W-DGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAA-TYGGRT---DDFIEEREYEKP------L  137 (308)
T ss_pred             EEEECceecCCcC-C-ChHHHHHHHHHHHHHHHHHHHHcCC-cEEEEcchH-HhCcCC---CCCCccCCCCCC------C
Confidence            9999998654322 1 2245789999999999999999886 799999975 555431   234556554433      4


Q ss_pred             chHHHHHHHHHHHHHHHHHhCCccEEEEccCeeecCCCCCCC---CccHHHHHHHHcCCCCCC-CCCchhhhhhhhhccc
Q 025755          160 NYYCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTI---NTSSLLLLGFLKGFFFTT-PSHSYMLERTLVLNQG  235 (248)
Q Consensus       160 ~~Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~---~~~~~~~~~~~~~~~l~~-~~~~~~~g~~l~vd~g  235 (248)
                      ++|+.+|.++|.+++.++.+++++++++||+++|||.+....   .....+..++..+..+.+ .++.....+.+||||.
T Consensus       138 ~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~r~~i~v~D~  217 (308)
T PRK11150        138 NVYGYSKFLFDEYVRQILPEANSQICGFRYFNVYGPREGHKGSMASVAFHLNNQLNNGENPKLFEGSENFKRDFVYVGDV  217 (308)
T ss_pred             CHHHHHHHHHHHHHHHHHHHcCCCEEEEeeeeecCCCCCCCCccchhHHHHHHHHhcCCCCEEecCCCceeeeeeeHHHH
Confidence            569999999999999998887899999999999999865421   122234456666654322 3344556778999998


Q ss_pred             eeEEEeecc
Q 025755          236 VRLYRCKIQ  244 (248)
Q Consensus       236 ~~~~~~~~~  244 (248)
                      ..++..+++
T Consensus       218 a~a~~~~~~  226 (308)
T PRK11150        218 AAVNLWFWE  226 (308)
T ss_pred             HHHHHHHHh
Confidence            887655544

>PRK09135 pteridine reductase; Provisional

Probab=99.94  E-value=4.6e-26  Score=185.26  Aligned_cols=177  Identities=19%  Similarity=0.174  Sum_probs=133.5

Q ss_pred             CCCCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCC-CCCeEEEEccCCCHHHHHHHhC---
Q 025755            1 MSGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGA-SENLQLFKTDLLDYEALCAATA---   76 (248)
Q Consensus         1 m~~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Di~d~~~~~~~~~---   76 (248)
                      |+.+++++++||||+|+||++++++|+++|++|++++|+..+........+... ...+.++.+|++|.+++.++++   
T Consensus         1 ~~~~~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   80 (249)
T PRK09135          1 MMTDSAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACV   80 (249)
T ss_pred             CCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHH
Confidence            555778999999999999999999999999999999987533222222222221 2458889999999999888776   


Q ss_pred             ----CCCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHHhc---CCCEEEEEeccceeccCCCCCCCCccC
Q 025755           77 ----GCTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCVKA---KVKRVVVVSSIGAVMLNPNWPKGQVMD  145 (248)
Q Consensus        77 ----~id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~~~---~~~~iV~vSS~~~~~~~~~~~~~~~~~  145 (248)
                          ++|+||||||.......    .+.+..++++|+.++.++++++.+.   ..+.+++++|..+..+.+         
T Consensus        81 ~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------  151 (249)
T PRK09135         81 AAFGRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITDIHAERPLK---------  151 (249)
T ss_pred             HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeChhhcCCCC---------
Confidence                47999999997543221    2334678899999999999999753   335777777643322211         


Q ss_pred             CCCCCchhhhccccchHHHHHHHHHHHHHHHHHhC--CccEEEEccCeeecCCCC
Q 025755          146 EECWSDEEFCKATENYYCLAKTIAEIQALEYAKRG--ELDIVTVCPSIVIGPMLQ  198 (248)
Q Consensus       146 e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~--~i~v~~vrpg~i~g~~~~  198 (248)
                                  +...|+.||++.+.+++.++.++  ++++++++||+++||...
T Consensus       152 ------------~~~~Y~~sK~~~~~~~~~l~~~~~~~i~~~~v~pg~~~~~~~~  194 (249)
T PRK09135        152 ------------GYPVYCAAKAALEMLTRSLALELAPEVRVNAVAPGAILWPEDG  194 (249)
T ss_pred             ------------CchhHHHHHHHHHHHHHHHHHHHCCCCeEEEEEeccccCcccc
Confidence                        13449999999999999988764  599999999999999864

>PRK07060 short chain dehydrogenase; Provisional

Probab=99.94  E-value=2.5e-26  Score=186.51  Aligned_cols=209  Identities=20%  Similarity=0.197  Sum_probs=151.5

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC---CCC
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA---GCT   79 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~---~id   79 (248)
                      ++++|+++|||++|+||+++++.|+++|++|++++|+.++.. ...+.     ....++.+|++|.+++.++++   ++|
T Consensus         6 ~~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~-~~~~~-----~~~~~~~~D~~~~~~v~~~~~~~~~~d   79 (245)
T PRK07060          6 DFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALD-RLAGE-----TGCEPLRLDVGDDAAIRAALAAAGAFD   79 (245)
T ss_pred             ccCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHH-----hCCeEEEecCCCHHHHHHHHHHhCCCC
Confidence            367899999999999999999999999999999999763221 11111     135678899999998888876   489


Q ss_pred             EEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHHhc----C-CCEEEEEeccceeccCCCCCCCCccCCCCCC
Q 025755           80 GVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCVKA----K-VKRVVVVSSIGAVMLNPNWPKGQVMDEECWS  150 (248)
Q Consensus        80 ~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~~~----~-~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~  150 (248)
                      +||||||.......    .+++...+++|+.++.++++++.+.    + .++||++||..++++.+...           
T Consensus        80 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~-----------  148 (245)
T PRK07060         80 GLVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGLPDHL-----------  148 (245)
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCCCCCc-----------
Confidence            99999997654321    2345667889999999999888653    2 37999999987766654322           


Q ss_pred             chhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCCCc---cHHHHHHHHcCC---------
Q 025755          151 DEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTINT---SSLLLLGFLKGF---------  215 (248)
Q Consensus       151 ~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~~~---~~~~~~~~~~~~---------  215 (248)
                                .|+.+|.+.+.+++.++.+   .++++++++||.++++........   ..........++         
T Consensus       149 ----------~y~~sK~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~  218 (245)
T PRK07060        149 ----------AYCASKAALDAITRVLCVELGPHGIRVNSVNPTVTLTPMAAEAWSDPQKSGPMLAAIPLGRFAEVDDVAA  218 (245)
T ss_pred             ----------HhHHHHHHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCchhhhhccCHHHHHHHHhcCCCCCCCCHHHHHH
Confidence                      3999999888888777654   369999999999999874321000   001111111111         


Q ss_pred             ---CCCCCCCchhhhhhhhhccceeE
Q 025755          216 ---FFTTPSHSYMLERTLVLNQGVRL  238 (248)
Q Consensus       216 ---~l~~~~~~~~~g~~l~vd~g~~~  238 (248)
                         ++..+...+++|+.+.+|||+.+
T Consensus       219 ~~~~l~~~~~~~~~G~~~~~~~g~~~  244 (245)
T PRK07060        219 PILFLLSDAASMVSGVSLPVDGGYTA  244 (245)
T ss_pred             HHHHHcCcccCCccCcEEeECCCccC
Confidence               45556678899999999999753

>PLN02996 fatty acyl-CoA reductase

Probab=99.94  E-value=3e-26  Score=202.81  Aligned_cols=235  Identities=17%  Similarity=0.148  Sum_probs=165.0

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCC---CeEEEEEcCCCchh-hHHhh-hhc-------------C-----CCCCeEE
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKG---YMVHGTVRDPCDEK-NAHLK-KLE-------------G-----ASENLQL   60 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g---~~V~~~~r~~~~~~-~~~~~-~~~-------------~-----~~~~~~~   60 (248)
                      +++|+|+|||||||||++++++|++.+   .+|+++.|...... .+.+. .+.             .     ...++.+
T Consensus         9 ~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~   88 (491)
T PLN02996          9 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTP   88 (491)
T ss_pred             hCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEE
Confidence            578999999999999999999999865   36789998764221 11111 100             0     0157899


Q ss_pred             EEccCC-------CHHHHHHHhCCCCEEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhc-CCCEEEEEecccee
Q 025755           61 FKTDLL-------DYEALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKA-KVKRVVVVSSIGAV  132 (248)
Q Consensus        61 ~~~Di~-------d~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~-~~~~iV~vSS~~~~  132 (248)
                      +.+|++       |.+.++.+++++|+|||+|+.....   ..+...+++|+.|+.++++++++. +.+++|++||..+ 
T Consensus        89 i~GDl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V~vST~~v-  164 (491)
T PLN02996         89 VPGDISYDDLGVKDSNLREEMWKEIDIVVNLAATTNFD---ERYDVALGINTLGALNVLNFAKKCVKVKMLLHVSTAYV-  164 (491)
T ss_pred             EecccCCcCCCCChHHHHHHHHhCCCEEEECccccCCc---CCHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeeEE-
Confidence            999998       4555778888999999999976542   345778999999999999999986 6789999999664 


Q ss_pred             ccCCC-CCCCCccCCCCC---------------------------Cc--------------hhhhccccchHHHHHHHHH
Q 025755          133 MLNPN-WPKGQVMDEECW---------------------------SD--------------EEFCKATENYYCLAKTIAE  170 (248)
Q Consensus       133 ~~~~~-~~~~~~~~e~~~---------------------------~~--------------~~~~~~~~~~Y~~sK~~~e  170 (248)
                      ++... ...+.++++...                           ..              +.....+.+.|+.||+++|
T Consensus       165 yG~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pn~Y~~TK~~aE  244 (491)
T PLN02996        165 CGEKSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWPNTYVFTKAMGE  244 (491)
T ss_pred             ecCCCceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCCCCCchHhhHHHHH
Confidence            44321 111122221110                           00              0001234567999999999


Q ss_pred             HHHHHHHHhCCccEEEEccCeeecCCCCCCCCcc------HHHHHHHHcCCCCCCCCCchhhhhhhhhccceeEEEeecc
Q 025755          171 IQALEYAKRGELDIVTVCPSIVIGPMLQPTINTS------SLLLLGFLKGFFFTTPSHSYMLERTLVLNQGVRLYRCKIQ  244 (248)
Q Consensus       171 ~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~~~------~~~~~~~~~~~~l~~~~~~~~~g~~l~vd~g~~~~~~~~~  244 (248)
                      .++..++.  +++++++||++|+||.+.+.....      ..++..+..|......+++....++++||+.+.++..+..
T Consensus       245 ~lv~~~~~--~lpv~i~RP~~V~G~~~~p~~gwi~~~~~~~~i~~~~~~g~~~~~~gdg~~~~D~v~Vddvv~a~l~a~~  322 (491)
T PLN02996        245 MLLGNFKE--NLPLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGYGKGKLTCFLADPNSVLDVIPADMVVNAMIVAMA  322 (491)
T ss_pred             HHHHHhcC--CCCEEEECCCEeccCCcCCCCCcccchhhHHHHHHHhccceEeEEecCCCeecceecccHHHHHHHHHHH
Confidence            99988754  699999999999999876643322      2334444556555556677778889999999888766643

>PRK06194 hypothetical protein; Provisional

Probab=99.94  E-value=3.2e-26  Score=190.39  Aligned_cols=176  Identities=14%  Similarity=0.095  Sum_probs=135.4

Q ss_pred             CCCCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC----
Q 025755            1 MSGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA----   76 (248)
Q Consensus         1 m~~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~----   76 (248)
                      |..+++|++|||||+||||++++++|+++|++|++++|+... .......+.....++.++.+|++|.++++++++    
T Consensus         1 m~~~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~   79 (287)
T PRK06194          1 MKDFAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDA-LDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALE   79 (287)
T ss_pred             CcCCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHH-HHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            677889999999999999999999999999999999987532 223333333334568889999999999988876    


Q ss_pred             ---CCCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHH----HhcCC------CEEEEEeccceeccCCCCC
Q 025755           77 ---GCTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSC----VKAKV------KRVVVVSSIGAVMLNPNWP  139 (248)
Q Consensus        77 ---~id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~----~~~~~------~~iV~vSS~~~~~~~~~~~  139 (248)
                         .+|+||||||.......    .+.+...+++|+.++.++++++    .+.+.      ++||++||..++++.+...
T Consensus        80 ~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~  159 (287)
T PRK06194         80 RFGAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAPPAMG  159 (287)
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCCCc
Confidence               47999999998665322    2344567899999998877775    33332      6999999987776554332


Q ss_pred             CCCccCCCCCCchhhhccccchHHHHHHHHHHHHHHHHHhC-----CccEEEEccCeeecCCCC
Q 025755          140 KGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKRG-----ELDIVTVCPSIVIGPMLQ  198 (248)
Q Consensus       140 ~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~-----~i~v~~vrpg~i~g~~~~  198 (248)
                                           .|+.+|++.+.+++.++.++     ++|+++++||.+.++...
T Consensus       160 ---------------------~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~~~~  202 (287)
T PRK06194        160 ---------------------IYNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTGIWQ  202 (287)
T ss_pred             ---------------------chHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCcccc
Confidence                                 39999998888777766532     589999999999887643

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=99.94  E-value=3.2e-26  Score=185.83  Aligned_cols=208  Identities=19%  Similarity=0.182  Sum_probs=146.7

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-------CC
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-------GC   78 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-------~i   78 (248)
                      +|+++||||+|+||+++++.|+++|++|++++|+..+..............++.++.+|++|.+++.++++       .+
T Consensus         2 ~k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~i   81 (245)
T PRK12824          2 KKIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGPV   81 (245)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            37999999999999999999999999999999985322222222222234568999999999998888765       48


Q ss_pred             CEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHH----HhcCCCEEEEEeccceeccCCCCCCCCccCCCCCC
Q 025755           79 TGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSC----VKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWS  150 (248)
Q Consensus        79 d~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~----~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~  150 (248)
                      |+|||+||.......    .+.+..++++|+.++.++.+++    ++.+.++||++||..+..+.+....          
T Consensus        82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~----------  151 (245)
T PRK12824         82 DILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGLKGQFGQTN----------  151 (245)
T ss_pred             CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhccCCCCChH----------
Confidence            999999997543211    2344678899999988875554    4456789999999776655443322          


Q ss_pred             chhhhccccchHHHHHHHHHHHHHHHHH---hCCccEEEEccCeeecCCCCCCCCccHHHHHHHHcC-------------
Q 025755          151 DEEFCKATENYYCLAKTIAEIQALEYAK---RGELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKG-------------  214 (248)
Q Consensus       151 ~~~~~~~~~~~Y~~sK~~~e~l~~~~~~---~~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~~-------------  214 (248)
                                 |+.+|.+.+.+.+.++.   +.++++++++||++.+|+.....   ..........             
T Consensus       152 -----------Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~---~~~~~~~~~~~~~~~~~~~~~va  217 (245)
T PRK12824        152 -----------YSAAKAGMIGFTKALASEGARYGITVNCIAPGYIATPMVEQMG---PEVLQSIVNQIPMKRLGTPEEIA  217 (245)
T ss_pred             -----------HHHHHHHHHHHHHHHHHHHHHhCeEEEEEEEcccCCcchhhcC---HHHHHHHHhcCCCCCCCCHHHHH
Confidence                       99999855555555443   23699999999999998654321   1111111110             


Q ss_pred             ---CCCCCCCCchhhhhhhhhcccee
Q 025755          215 ---FFFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       215 ---~~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                         .++..+...+++|+.+.+|||..
T Consensus       218 ~~~~~l~~~~~~~~~G~~~~~~~g~~  243 (245)
T PRK12824        218 AAVAFLVSEAAGFITGETISINGGLY  243 (245)
T ss_pred             HHHHHHcCccccCccCcEEEECCCee
Confidence               04455557789999999999974

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=99.94  E-value=7e-26  Score=191.40  Aligned_cols=196  Identities=17%  Similarity=0.129  Sum_probs=136.0

Q ss_pred             CCCCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC----
Q 025755            1 MSGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA----   76 (248)
Q Consensus         1 m~~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~----   76 (248)
                      |+.+++|+++||||+||||+++++.|+++|++|++++|+.... ....+.+.....++.++.+|++|.++++++++    
T Consensus         1 m~~~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~-~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   79 (322)
T PRK07453          1 MSQDAKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKA-EAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRA   79 (322)
T ss_pred             CCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHH-HHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHH
Confidence            6667899999999999999999999999999999999976422 22223332234568899999999999888775    


Q ss_pred             ---CCCEEEEccccCCCC-----CCCCccccchhhhHHHHHHHHHHHHhc----C--CCEEEEEeccceeccCCCCC--C
Q 025755           77 ---GCTGVFHVACPVPVG-----KVPNPEVQLIDPAVVGTKNVLNSCVKA----K--VKRVVVVSSIGAVMLNPNWP--K  140 (248)
Q Consensus        77 ---~id~vi~~ag~~~~~-----~~~~~~~~~~~~n~~g~~~~~~~~~~~----~--~~~iV~vSS~~~~~~~~~~~--~  140 (248)
                         .+|+||||||+....     ...+.++.++++|+.|+.++++++.+.    +  .+|||++||....+......  .
T Consensus        80 ~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~~~~~~  159 (322)
T PRK07453         80 LGKPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGGKIPI  159 (322)
T ss_pred             hCCCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCccccCCccCC
Confidence               389999999975431     122345678999999999888887653    2  35999999976544211000  0


Q ss_pred             CCccCCCCCC------------chhhhccccchHHHHHHHHHHHHHHHHHhC----CccEEEEccCeee-cCCC
Q 025755          141 GQVMDEECWS------------DEEFCKATENYYCLAKTIAEIQALEYAKRG----ELDIVTVCPSIVI-GPML  197 (248)
Q Consensus       141 ~~~~~e~~~~------------~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~----~i~v~~vrpg~i~-g~~~  197 (248)
                      ..+.+.++..            ......++...|+.||.+.+.+++++++++    ++++++++||+++ +++.
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~  233 (322)
T PRK07453        160 PAPADLGDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVADTPLF  233 (322)
T ss_pred             CCccchhhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCCccc
Confidence            0000100000            001123456779999987777776666543    6999999999997 4543

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.94  E-value=2.9e-26  Score=185.66  Aligned_cols=175  Identities=22%  Similarity=0.200  Sum_probs=131.7

Q ss_pred             CCCCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhh--HHhhhhcCCCCCeEEEEccCCCHHHHHHHhC--
Q 025755            1 MSGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKN--AHLKKLEGASENLQLFKTDLLDYEALCAATA--   76 (248)
Q Consensus         1 m~~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~--   76 (248)
                      |+.+.+|+|+||||++|||.++|.+|+++|.+++.+.|.......  +.+++..... ++..+++|++|.++++++++  
T Consensus         7 ~e~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~-~v~~~~~Dvs~~~~~~~~~~~~   85 (282)
T KOG1205|consen    7 MERLAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLE-KVLVLQLDVSDEESVKKFVEWA   85 (282)
T ss_pred             HHHhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcC-ccEEEeCccCCHHHHHHHHHHH
Confidence            345789999999999999999999999999998888887653322  2222222222 69999999999999997763  


Q ss_pred             -----CCCEEEEccccCCCCCCC----CccccchhhhHHHHHHHHHHHH----hcCCCEEEEEeccceeccCCCCCCCCc
Q 025755           77 -----GCTGVFHVACPVPVGKVP----NPEVQLIDPAVVGTKNVLNSCV----KAKVKRVVVVSSIGAVMLNPNWPKGQV  143 (248)
Q Consensus        77 -----~id~vi~~ag~~~~~~~~----~~~~~~~~~n~~g~~~~~~~~~----~~~~~~iV~vSS~~~~~~~~~~~~~~~  143 (248)
                           ++|++|||||........    ......+++|+.|+..+.+++.    +.+.|+||.+||.++..+.|..+.   
T Consensus        86 ~~~fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~P~~~~---  162 (282)
T KOG1205|consen   86 IRHFGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPLPFRSI---  162 (282)
T ss_pred             HHhcCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCCCcccc---
Confidence                 689999999987733221    2235689999999776666665    445689999999998887765333   


Q ss_pred             cCCCCCCchhhhccccchHHHHHH----HHHHHHHHHHHhCC-ccEEEEccCeeecCCCC
Q 025755          144 MDEECWSDEEFCKATENYYCLAKT----IAEIQALEYAKRGE-LDIVTVCPSIVIGPMLQ  198 (248)
Q Consensus       144 ~~e~~~~~~~~~~~~~~~Y~~sK~----~~e~l~~~~~~~~~-i~v~~vrpg~i~g~~~~  198 (248)
                                        |++||.    +.|.+..|+..... +++ +|.||+|.+....
T Consensus       163 ------------------Y~ASK~Al~~f~etLR~El~~~~~~i~i-~V~PG~V~Te~~~  203 (282)
T KOG1205|consen  163 ------------------YSASKHALEGFFETLRQELIPLGTIIII-LVSPGPIETEFTG  203 (282)
T ss_pred             ------------------cchHHHHHHHHHHHHHHHhhccCceEEE-EEecCceeecccc
Confidence                              999995    66777777765442 455 8999999998543

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=99.94  E-value=9.7e-27  Score=195.04  Aligned_cols=208  Identities=17%  Similarity=0.093  Sum_probs=152.9

Q ss_pred             EEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC--CCCEEEEcccc
Q 025755           10 CVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA--GCTGVFHVACP   87 (248)
Q Consensus        10 lVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~--~id~vi~~ag~   87 (248)
                      |||||+|+||+++++.|+++|++|++..+.                     ..+|++|.+++.++++  ++|+|||+|+.
T Consensus         1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~---------------------~~~Dl~~~~~l~~~~~~~~~d~Vih~A~~   59 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH---------------------KELDLTRQADVEAFFAKEKPTYVILAAAK   59 (306)
T ss_pred             CcccCCCcccHHHHHHHHhCCCcEEEeecc---------------------ccCCCCCHHHHHHHHhccCCCEEEEeeee
Confidence            699999999999999999999988865432                     1489999999999887  47999999997


Q ss_pred             CCCC-CCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhcccc-chHHHH
Q 025755           88 VPVG-KVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATE-NYYCLA  165 (248)
Q Consensus        88 ~~~~-~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~-~~Y~~s  165 (248)
                      .... .....+.++++.|+.++.+++++|++.+.+++|++||.. +|+...   ..+++|+++..  .+..|. .+|+.|
T Consensus        60 ~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~SS~~-vyg~~~---~~~~~E~~~~~--~~~~p~~~~Y~~s  133 (306)
T PLN02725         60 VGGIHANMTYPADFIRENLQIQTNVIDAAYRHGVKKLLFLGSSC-IYPKFA---PQPIPETALLT--GPPEPTNEWYAIA  133 (306)
T ss_pred             ecccchhhhCcHHHHHHHhHHHHHHHHHHHHcCCCeEEEeCcee-ecCCCC---CCCCCHHHhcc--CCCCCCcchHHHH
Confidence            5431 122344678999999999999999999999999999965 555422   45677776432  112222 349999


Q ss_pred             HHHHHHHHHHHHHhCCccEEEEccCeeecCCCCCC---CCccHHHHHHH----HcCCCCCC-CCCchhhhhhhhhcccee
Q 025755          166 KTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPT---INTSSLLLLGF----LKGFFFTT-PSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       166 K~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~---~~~~~~~~~~~----~~~~~l~~-~~~~~~~g~~l~vd~g~~  237 (248)
                      |.++|.+++++.++++++++++||+.+|||.....   ....+.++..+    ..+..+.. ..++....+.+|++|.+.
T Consensus       134 K~~~e~~~~~~~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dv~~  213 (306)
T PLN02725        134 KIAGIKMCQAYRIQYGWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVWGSGSPLREFLHVDDLAD  213 (306)
T ss_pred             HHHHHHHHHHHHHHhCCCEEEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhcCCCeEEEcCCCCeeeccccHHHHHH
Confidence            99999999999888889999999999999975321   12334444332    33433332 444444557899999988


Q ss_pred             EEEeecc
Q 025755          238 LYRCKIQ  244 (248)
Q Consensus       238 ~~~~~~~  244 (248)
                      ++..+++
T Consensus       214 ~~~~~~~  220 (306)
T PLN02725        214 AVVFLMR  220 (306)
T ss_pred             HHHHHHh
Confidence            7766554

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.94  E-value=1.8e-26  Score=188.13  Aligned_cols=176  Identities=15%  Similarity=0.053  Sum_probs=135.0

Q ss_pred             CCCCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC----
Q 025755            1 MSGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA----   76 (248)
Q Consensus         1 m~~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~----   76 (248)
                      |+.+++++++||||+|+||++++++|+++|++|++..|+..+........+.....++.++.+|+++.+++.++++    
T Consensus         1 ~~~~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   80 (252)
T PRK06077          1 MYSLKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATID   80 (252)
T ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHH
Confidence            6668899999999999999999999999999998877654333333333333334567888999999998877765    


Q ss_pred             ---CCCEEEEccccCCCCCCC----CccccchhhhHHHHHHHHHHHHhc--CCCEEEEEeccceeccCCCCCCCCccCCC
Q 025755           77 ---GCTGVFHVACPVPVGKVP----NPEVQLIDPAVVGTKNVLNSCVKA--KVKRVVVVSSIGAVMLNPNWPKGQVMDEE  147 (248)
Q Consensus        77 ---~id~vi~~ag~~~~~~~~----~~~~~~~~~n~~g~~~~~~~~~~~--~~~~iV~vSS~~~~~~~~~~~~~~~~~e~  147 (248)
                         .+|+||||||........    +.+...+++|+.++.++++++.+.  ..++||++||..++.+.+..         
T Consensus        81 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~---------  151 (252)
T PRK06077         81 RYGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAGIRPAYGL---------  151 (252)
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhccCCCCCc---------
Confidence               579999999975433221    223567899999999999988765  34699999998766554332         


Q ss_pred             CCCchhhhccccchHHHHHHHHHHHHHHHHHhC--CccEEEEccCeeecCCC
Q 025755          148 CWSDEEFCKATENYYCLAKTIAEIQALEYAKRG--ELDIVTVCPSIVIGPML  197 (248)
Q Consensus       148 ~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~--~i~v~~vrpg~i~g~~~  197 (248)
                                  ..|+.+|+..+.+++.++.++  ++++++++||.+.+++.
T Consensus       152 ------------~~Y~~sK~~~~~~~~~l~~~~~~~i~v~~v~Pg~i~t~~~  191 (252)
T PRK06077        152 ------------SIYGAMKAAVINLTKYLALELAPKIRVNAIAPGFVKTKLG  191 (252)
T ss_pred             ------------hHHHHHHHHHHHHHHHHHHHHhcCCEEEEEeeCCccChHH
Confidence                        339999998888888777654  69999999999998864

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=99.94  E-value=6.2e-26  Score=184.67  Aligned_cols=209  Identities=16%  Similarity=0.155  Sum_probs=144.7

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-------CC
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-------GC   78 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-------~i   78 (248)
                      +|+++||||+|+||+++++.|+++|++|+++.++..+........+.....++.++.+|++|.++++.+++       ++
T Consensus         2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   81 (248)
T PRK06947          2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFGRL   81 (248)
T ss_pred             CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcCCC
Confidence            57999999999999999999999999998876544333333333333334578999999999988877664       58


Q ss_pred             CEEEEccccCCCCCC-----CCccccchhhhHHHHHHHHHHHHhc----C---CCEEEEEeccceeccCCC-CCCCCccC
Q 025755           79 TGVFHVACPVPVGKV-----PNPEVQLIDPAVVGTKNVLNSCVKA----K---VKRVVVVSSIGAVMLNPN-WPKGQVMD  145 (248)
Q Consensus        79 d~vi~~ag~~~~~~~-----~~~~~~~~~~n~~g~~~~~~~~~~~----~---~~~iV~vSS~~~~~~~~~-~~~~~~~~  145 (248)
                      |+||||||.......     .+.+...+++|+.++.++++++.+.    +   .++||++||..+.++.+. +..     
T Consensus        82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~~-----  156 (248)
T PRK06947         82 DALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGSPNEYVD-----  156 (248)
T ss_pred             CEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCCCCCCcc-----
Confidence            999999997643211     1234567899999998887655432    1   357999999776665432 122     


Q ss_pred             CCCCCchhhhccccchHHHHHHHHHHHHHHHHHhC---CccEEEEccCeeecCCCCCCCCc-cHHHH------------H
Q 025755          146 EECWSDEEFCKATENYYCLAKTIAEIQALEYAKRG---ELDIVTVCPSIVIGPMLQPTINT-SSLLL------------L  209 (248)
Q Consensus       146 e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~---~i~v~~vrpg~i~g~~~~~~~~~-~~~~~------------~  209 (248)
                                      |+.||...+.+++.++.+.   +++|++++||++.+|+....... .....            +
T Consensus       157 ----------------Y~~sK~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~e  220 (248)
T PRK06947        157 ----------------YAGSKGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHASGGQPGRAARLGAQTPLGRAGEAD  220 (248)
T ss_pred             ----------------cHhhHHHHHHHHHHHHHHhhhhCcEEEEEeccCcccccccccCCHHHHHHHhhcCCCCCCcCHH
Confidence                            9999987777766666543   69999999999999974321000 00000            1


Q ss_pred             HHHcC-CCCCCCCCchhhhhhhhhccc
Q 025755          210 GFLKG-FFFTTPSHSYMLERTLVLNQG  235 (248)
Q Consensus       210 ~~~~~-~~l~~~~~~~~~g~~l~vd~g  235 (248)
                      ..... .++......+++|+++.+|||
T Consensus       221 ~va~~~~~l~~~~~~~~~G~~~~~~gg  247 (248)
T PRK06947        221 EVAETIVWLLSDAASYVTGALLDVGGG  247 (248)
T ss_pred             HHHHHHHHHcCccccCcCCceEeeCCC
Confidence            11110 045556667999999999987

>PRK12744 short chain dehydrogenase; Provisional

Probab=99.94  E-value=2.9e-26  Score=187.70  Aligned_cols=209  Identities=13%  Similarity=0.153  Sum_probs=144.6

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCC---chhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC----
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPC---DEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA----   76 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~----   76 (248)
                      +++|+++||||+|+||+++++.|+++|++|+++.++..   +......+.+.....++.++++|++|.++++++++    
T Consensus         6 l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (257)
T PRK12744          6 LKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKA   85 (257)
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHH
Confidence            57899999999999999999999999999777765432   11122222232234578899999999999888765    


Q ss_pred             ---CCCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHHhc--CCCEEEEE-eccceeccCCCCCCCCccCC
Q 025755           77 ---GCTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCVKA--KVKRVVVV-SSIGAVMLNPNWPKGQVMDE  146 (248)
Q Consensus        77 ---~id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~~~--~~~~iV~v-SS~~~~~~~~~~~~~~~~~e  146 (248)
                         ++|++|||||.......    .+.+..++++|+.++..+++++.+.  ..++++++ ||..+.+ .+.+        
T Consensus        86 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~~ss~~~~~-~~~~--------  156 (257)
T PRK12744         86 AFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTLVTSLLGAF-TPFY--------  156 (257)
T ss_pred             hhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEEEecchhccc-CCCc--------
Confidence               58999999997543221    2345678999999999999999765  23577776 4433322 2222        


Q ss_pred             CCCCchhhhccccchHHHHHHHHHHHHHHHHHhC---CccEEEEccCeeecCCCCCCCCcc-------------------
Q 025755          147 ECWSDEEFCKATENYYCLAKTIAEIQALEYAKRG---ELDIVTVCPSIVIGPMLQPTINTS-------------------  204 (248)
Q Consensus       147 ~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~---~i~v~~vrpg~i~g~~~~~~~~~~-------------------  204 (248)
                                   ..|+.||++.+.+++.++.+.   +++|++++||.+.+++..+.....                   
T Consensus       157 -------------~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (257)
T PRK12744        157 -------------SAYAGSKAPVEHFTRAASKEFGARGISVTAVGPGPMDTPFFYPQEGAEAVAYHKTAAALSPFSKTGL  223 (257)
T ss_pred             -------------ccchhhHHHHHHHHHHHHHHhCcCceEEEEEecCccccchhccccccchhhcccccccccccccCCC
Confidence                         239999998888887777653   599999999999988643211000                   


Q ss_pred             --HHHHHHHHcCCCCCCCCCchhhhhhhhhcccee
Q 025755          205 --SLLLLGFLKGFFFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       205 --~~~~~~~~~~~~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                        +.-+..+.  .++..+ ..|++|+++.+|||..
T Consensus       224 ~~~~dva~~~--~~l~~~-~~~~~g~~~~~~gg~~  255 (257)
T PRK12744        224 TDIEDIVPFI--RFLVTD-GWWITGQTILINGGYT  255 (257)
T ss_pred             CCHHHHHHHH--HHhhcc-cceeecceEeecCCcc
Confidence              00000000  045553 5789999999999964

>PRK08278 short chain dehydrogenase; Provisional

Probab=99.94  E-value=6.5e-26  Score=187.35  Aligned_cols=174  Identities=16%  Similarity=0.116  Sum_probs=130.7

Q ss_pred             CCCCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCch------hhHHhhhhcCCCCCeEEEEccCCCHHHHHHH
Q 025755            1 MSGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDE------KNAHLKKLEGASENLQLFKTDLLDYEALCAA   74 (248)
Q Consensus         1 m~~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~------~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~   74 (248)
                      |+.+++|+++||||+||||+++++.|+++|++|++++|+....      .....+.+.....++.++.+|++|.+++.++
T Consensus         1 ~~~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~   80 (273)
T PRK08278          1 MMSLSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAA   80 (273)
T ss_pred             CCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHH
Confidence            5668899999999999999999999999999999999976421      1112223333445788999999999998887


Q ss_pred             hC-------CCCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHHhc----CCCEEEEEeccceeccC--CC
Q 025755           75 TA-------GCTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCVKA----KVKRVVVVSSIGAVMLN--PN  137 (248)
Q Consensus        75 ~~-------~id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~~~----~~~~iV~vSS~~~~~~~--~~  137 (248)
                      ++       ++|+||||||.......    .+.++..+++|+.++.++++++.+.    +.++||++||.....+.  +.
T Consensus        81 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~  160 (273)
T PRK08278         81 VAKAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLDPKWFAP  160 (273)
T ss_pred             HHHHHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhccccccCC
Confidence            75       58999999997544322    2334668899999999999998653    45799999986543322  21


Q ss_pred             CCCCCccCCCCCCchhhhccccchHHHHHHHHHHHHHHHHHhC---CccEEEEccC-eeecC
Q 025755          138 WPKGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKRG---ELDIVTVCPS-IVIGP  195 (248)
Q Consensus       138 ~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~---~i~v~~vrpg-~i~g~  195 (248)
                                           ...|+.||++.+.+++.++.+.   +++|++|+|| .+.++
T Consensus       161 ---------------------~~~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t~  201 (273)
T PRK08278        161 ---------------------HTAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIATA  201 (273)
T ss_pred             ---------------------cchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCccccH
Confidence                                 2339999987777777666543   6999999999 46665

>PRK09134 short chain dehydrogenase; Provisional

Probab=99.94  E-value=3e-26  Score=187.74  Aligned_cols=211  Identities=16%  Similarity=0.089  Sum_probs=148.2

Q ss_pred             CCCCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC----
Q 025755            1 MSGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA----   76 (248)
Q Consensus         1 m~~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~----   76 (248)
                      |++.++|+++||||+|+||+++++.|+++|++|+++.+...+........+.....++.++.+|++|.+++.++++    
T Consensus         4 ~~~~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~   83 (258)
T PRK09134          4 MSMAAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASA   83 (258)
T ss_pred             CcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            3446789999999999999999999999999999887654322223333333334578899999999998888765    


Q ss_pred             ---CCCEEEEccccCCCCC----CCCccccchhhhHHHHHHHHHHHHhc----CCCEEEEEeccceeccCCCCCCCCccC
Q 025755           77 ---GCTGVFHVACPVPVGK----VPNPEVQLIDPAVVGTKNVLNSCVKA----KVKRVVVVSSIGAVMLNPNWPKGQVMD  145 (248)
Q Consensus        77 ---~id~vi~~ag~~~~~~----~~~~~~~~~~~n~~g~~~~~~~~~~~----~~~~iV~vSS~~~~~~~~~~~~~~~~~  145 (248)
                         ++|+||||||......    ..+.+..++++|+.++.++++++.+.    +.+++|+++|.....+.+.+       
T Consensus        84 ~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~~~p~~-------  156 (258)
T PRK09134         84 ALGPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWNLNPDF-------  156 (258)
T ss_pred             HcCCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcCCCCCc-------
Confidence               4799999999754321    12345678999999999999888764    34689999886544333322       


Q ss_pred             CCCCCchhhhccccchHHHHHHHHHHHHHHHHHhC--CccEEEEccCeeecCCCCCCCCccHHHHHHHHc----CC----
Q 025755          146 EECWSDEEFCKATENYYCLAKTIAEIQALEYAKRG--ELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLK----GF----  215 (248)
Q Consensus       146 e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~--~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~----~~----  215 (248)
                                    ..|+.||.+.+.+++.++.++  ++++++++||.++++.....    ..+ .....    +.    
T Consensus       157 --------------~~Y~~sK~a~~~~~~~la~~~~~~i~v~~i~PG~v~t~~~~~~----~~~-~~~~~~~~~~~~~~~  217 (258)
T PRK09134        157 --------------LSYTLSKAALWTATRTLAQALAPRIRVNAIGPGPTLPSGRQSP----EDF-ARQHAATPLGRGSTP  217 (258)
T ss_pred             --------------hHHHHHHHHHHHHHHHHHHHhcCCcEEEEeecccccCCcccCh----HHH-HHHHhcCCCCCCcCH
Confidence                          239999998888888877653  49999999999987643211    111 11111    11    


Q ss_pred             ------CCCCCCCchhhhhhhhhcccee
Q 025755          216 ------FFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       216 ------~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                            .+......+++|+.+.+|||..
T Consensus       218 ~d~a~~~~~~~~~~~~~g~~~~i~gg~~  245 (258)
T PRK09134        218 EEIAAAVRYLLDAPSVTGQMIAVDGGQH  245 (258)
T ss_pred             HHHHHHHHHHhcCCCcCCCEEEECCCee
Confidence                  1111224678999999999974

>PRK06057 short chain dehydrogenase; Provisional

Probab=99.94  E-value=8.1e-26  Score=184.88  Aligned_cols=207  Identities=18%  Similarity=0.196  Sum_probs=145.7

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC------
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA------   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~------   76 (248)
                      .+++|+++||||+|+||++++++|+++|++|++++|+.... ....+.+     ...++++|++|.++++++++      
T Consensus         4 ~~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~-~~~~~~~-----~~~~~~~D~~~~~~~~~~~~~~~~~~   77 (255)
T PRK06057          4 RLAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAG-KAAADEV-----GGLFVPTDVTDEDAVNALFDTAAETY   77 (255)
T ss_pred             cCCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHH-HHHHHHc-----CCcEEEeeCCCHHHHHHHHHHHHHHc
Confidence            36789999999999999999999999999999999976321 1111221     12578999999999888876      


Q ss_pred             -CCCEEEEccccCCCCC------CCCccccchhhhHHHHHHHHHHHH----hcCCCEEEEEeccceeccCC-CCCCCCcc
Q 025755           77 -GCTGVFHVACPVPVGK------VPNPEVQLIDPAVVGTKNVLNSCV----KAKVKRVVVVSSIGAVMLNP-NWPKGQVM  144 (248)
Q Consensus        77 -~id~vi~~ag~~~~~~------~~~~~~~~~~~n~~g~~~~~~~~~----~~~~~~iV~vSS~~~~~~~~-~~~~~~~~  144 (248)
                       ++|+||||||......      ..+.+...+++|+.++.++++.+.    +.+.++||++||..+.++.+ ..      
T Consensus        78 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~~~g~~~~~------  151 (255)
T PRK06057         78 GSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAVMGSATSQ------  151 (255)
T ss_pred             CCCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchhhccCCCCCC------
Confidence             5799999999754321      112356788999999887777664    34567999999976655432 21      


Q ss_pred             CCCCCCchhhhccccchHHHHHH----HHHHHHHHHHHhCCccEEEEccCeeecCCCCCCCCccHHHHHHH----HcC--
Q 025755          145 DEECWSDEEFCKATENYYCLAKT----IAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTINTSSLLLLGF----LKG--  214 (248)
Q Consensus       145 ~e~~~~~~~~~~~~~~~Y~~sK~----~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~----~~~--  214 (248)
                                     ..|+.+|+    +++.++.++..+ ++++++++||++.+|+.............+.    ..+  
T Consensus       152 ---------------~~Y~~sKaal~~~~~~l~~~~~~~-gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (255)
T PRK06057        152 ---------------ISYTASKGGVLAMSRELGVQFARQ-GIRVNALCPGPVNTPLLQELFAKDPERAARRLVHVPMGRF  215 (255)
T ss_pred             ---------------cchHHHHHHHHHHHHHHHHHHHhh-CcEEEEEeeCCcCCchhhhhccCCHHHHHHHHhcCCCCCC
Confidence                           23999996    445555555554 5999999999999987543211111111110    001  


Q ss_pred             ----------CCCCCCCCchhhhhhhhhcccee
Q 025755          215 ----------FFFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       215 ----------~~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                                .++..+...+++|+.+.+|||..
T Consensus       216 ~~~~~~a~~~~~l~~~~~~~~~g~~~~~~~g~~  248 (255)
T PRK06057        216 AEPEEIAAAVAFLASDDASFITASTFLVDGGIS  248 (255)
T ss_pred             cCHHHHHHHHHHHhCccccCccCcEEEECCCee
Confidence                      15667778999999999999966

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.94  E-value=5.1e-26  Score=184.82  Aligned_cols=213  Identities=17%  Similarity=0.132  Sum_probs=149.9

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEE-EcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-----
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGT-VRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-----   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-----   76 (248)
                      ++++|+++||||+|+||+++++.|+++|++|+++ .|+... .......+.....++.++.+|++|.+++.++++     
T Consensus         2 ~~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   80 (247)
T PRK05565          2 KLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEA-AQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEK   80 (247)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHH-HHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            3788999999999999999999999999999998 776532 222223333334568899999999999888775     


Q ss_pred             --CCCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHHh----cCCCEEEEEeccceeccCCCCCCCCccCC
Q 025755           77 --GCTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCVK----AKVKRVVVVSSIGAVMLNPNWPKGQVMDE  146 (248)
Q Consensus        77 --~id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~~----~~~~~iV~vSS~~~~~~~~~~~~~~~~~e  146 (248)
                        ++|+|||++|.......    .+.++..+++|+.++.++++.+.+    .+.+++|++||...+++.+....      
T Consensus        81 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~~~~------  154 (247)
T PRK05565         81 FGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLIGASCEVL------  154 (247)
T ss_pred             hCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhccCCCCccH------
Confidence              68999999998643221    233467889999998888877764    35678999999877766543333      


Q ss_pred             CCCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCCCccHHHHHH-HHcC--------
Q 025755          147 ECWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTINTSSLLLLG-FLKG--------  214 (248)
Q Consensus       147 ~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~-~~~~--------  214 (248)
                                     |+.+|...+.+++.++.+   .++++++++||.+.++............... ...+        
T Consensus       155 ---------------y~~sK~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  219 (247)
T PRK05565        155 ---------------YSASKGAVNAFTKALAKELAPSGIRVNAVAPGAIDTEMWSSFSEEDKEGLAEEIPLGRLGKPEEI  219 (247)
T ss_pred             ---------------HHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCccCccccccChHHHHHHHhcCCCCCCCCHHHH
Confidence                           999996555444444332   3699999999999887654321110000000 0000        


Q ss_pred             ----CCCCCCCCchhhhhhhhhcccee
Q 025755          215 ----FFFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       215 ----~~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                          .++.......++|+++.+|+|..
T Consensus       220 a~~~~~l~~~~~~~~~g~~~~~~~~~~  246 (247)
T PRK05565        220 AKVVLFLASDDASYITGQIITVDGGWT  246 (247)
T ss_pred             HHHHHHHcCCccCCccCcEEEecCCcc
Confidence                04455567889999999999965

>PRK05875 short chain dehydrogenase; Provisional

Probab=99.94  E-value=9e-26  Score=186.64  Aligned_cols=211  Identities=19%  Similarity=0.186  Sum_probs=151.7

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCC--CCCeEEEEccCCCHHHHHHHhC-----
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGA--SENLQLFKTDLLDYEALCAATA-----   76 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Di~d~~~~~~~~~-----   76 (248)
                      +++|+++|||++|+||+++++.|+++|++|++++|+.... ......+...  ..++.++.+|++|.+++.++++     
T Consensus         5 ~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~-~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   83 (276)
T PRK05875          5 FQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKL-AAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAW   83 (276)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHH-HHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            6789999999999999999999999999999999876422 1222222211  2468889999999998888776     


Q ss_pred             --CCCEEEEccccCCCC-----CCCCccccchhhhHHHHHHHHHHHHhc----CCCEEEEEeccceeccCCCCCCCCccC
Q 025755           77 --GCTGVFHVACPVPVG-----KVPNPEVQLIDPAVVGTKNVLNSCVKA----KVKRVVVVSSIGAVMLNPNWPKGQVMD  145 (248)
Q Consensus        77 --~id~vi~~ag~~~~~-----~~~~~~~~~~~~n~~g~~~~~~~~~~~----~~~~iV~vSS~~~~~~~~~~~~~~~~~  145 (248)
                        ++|+||||||.....     ...+.+...+++|+.++.++++++.+.    +.++||++||.....+.+..       
T Consensus        84 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~-------  156 (276)
T PRK05875         84 HGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASNTHRWF-------  156 (276)
T ss_pred             cCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcCCCCCC-------
Confidence              589999999964321     112234678899999999988877543    45699999997755443322       


Q ss_pred             CCCCCchhhhccccchHHHHHHHHHHHHHHHHHhC---CccEEEEccCeeecCCCCCCCCccHHHHHHHHcC--------
Q 025755          146 EECWSDEEFCKATENYYCLAKTIAEIQALEYAKRG---ELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKG--------  214 (248)
Q Consensus       146 e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~---~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~~--------  214 (248)
                                    ..|+.+|+..+.+++.++.+.   ++++++|+||.+.+++...... ...........        
T Consensus       157 --------------~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~  221 (276)
T PRK05875        157 --------------GAYGVTKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAPITE-SPELSADYRACTPLPRVGE  221 (276)
T ss_pred             --------------cchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCccCCcccccccc-CHHHHHHHHcCCCCCCCcC
Confidence                          239999998888888887654   5999999999999887543211 11111111110        


Q ss_pred             --------CCCCCCCCchhhhhhhhhcccee
Q 025755          215 --------FFFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       215 --------~~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                              .++......+++|+++.+|+|..
T Consensus       222 ~~dva~~~~~l~~~~~~~~~g~~~~~~~g~~  252 (276)
T PRK05875        222 VEDVANLAMFLLSDAASWITGQVINVDGGHM  252 (276)
T ss_pred             HHHHHHHHHHHcCchhcCcCCCEEEECCCee
Confidence                    04555556788999999999975

>PRK09186 flagellin modification protein A; Provisional

Probab=99.94  E-value=4.5e-26  Score=186.29  Aligned_cols=220  Identities=20%  Similarity=0.177  Sum_probs=145.7

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcC--CCCCeEEEEccCCCHHHHHHHhCC----
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEG--ASENLQLFKTDLLDYEALCAATAG----   77 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~Di~d~~~~~~~~~~----   77 (248)
                      +++|+++||||+|+||+++++.|+++|++|++++|+.+.. ......+..  ....+.++.+|++|.+++.+++++    
T Consensus         2 ~~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~-~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~   80 (256)
T PRK09186          2 LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEAL-NELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEK   80 (256)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHH-HHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHH
Confidence            6789999999999999999999999999999999886432 222222211  123567789999999998888763    


Q ss_pred             ---CCEEEEccccCCCC-------CCCCccccchhhhHHHHHHHHHHH----HhcCCCEEEEEeccceeccCCCCCCCCc
Q 025755           78 ---CTGVFHVACPVPVG-------KVPNPEVQLIDPAVVGTKNVLNSC----VKAKVKRVVVVSSIGAVMLNPNWPKGQV  143 (248)
Q Consensus        78 ---id~vi~~ag~~~~~-------~~~~~~~~~~~~n~~g~~~~~~~~----~~~~~~~iV~vSS~~~~~~~~~~~~~~~  143 (248)
                         +|+|||||+.....       ...+.+...+++|+.++..+++++    ++.+.++||++||..+.++..     ..
T Consensus        81 ~~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~-----~~  155 (256)
T PRK09186         81 YGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPK-----FE  155 (256)
T ss_pred             cCCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhcccc-----ch
Confidence               79999999754211       111334567888998876665555    445678999999976554321     11


Q ss_pred             cCCCCCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCC-----------CccHHHHH
Q 025755          144 MDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTI-----------NTSSLLLL  209 (248)
Q Consensus       144 ~~e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~-----------~~~~~~~~  209 (248)
                      ..++.+..      ....|+.||...+.+.+.++.+   .++++++++||.++++......           ...+.-+.
T Consensus       156 ~~~~~~~~------~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~~~~~~~~~~~~~~~~~~~~~~dva  229 (256)
T PRK09186        156 IYEGTSMT------SPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQPEAFLNAYKKCCNGKGMLDPDDIC  229 (256)
T ss_pred             hccccccC------CcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCCCHHHHHHHHhcCCccCCCCHHHhh
Confidence            11111111      1123999998777777666653   3699999999999876421000           00000000


Q ss_pred             HHHcCCCCCCCCCchhhhhhhhhcccee
Q 025755          210 GFLKGFFFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       210 ~~~~~~~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                      ...  .++..+...+++|+.+.+|||..
T Consensus       230 ~~~--~~l~~~~~~~~~g~~~~~~~g~~  255 (256)
T PRK09186        230 GTL--VFLLSDQSKYITGQNIIVDDGFS  255 (256)
T ss_pred             hhH--hheeccccccccCceEEecCCcc
Confidence            000  15556667899999999999964

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=99.94  E-value=8.3e-26  Score=188.74  Aligned_cols=201  Identities=25%  Similarity=0.228  Sum_probs=152.4

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCC--CeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEE
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKG--YMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGV   81 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~v   81 (248)
                      .++.+++||||+||+|.+++++|++++  .++.+++.......... +.......++.++.+|+.|...+.++++++ .|
T Consensus         2 ~~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~-e~~~~~~~~v~~~~~D~~~~~~i~~a~~~~-~V   79 (361)
T KOG1430|consen    2 EKKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPA-ELTGFRSGRVTVILGDLLDANSISNAFQGA-VV   79 (361)
T ss_pred             CcCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccch-hhhcccCCceeEEecchhhhhhhhhhccCc-eE
Confidence            467899999999999999999999998  78888887663111111 111113578999999999999999999999 88


Q ss_pred             EEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccccch
Q 025755           82 FHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENY  161 (248)
Q Consensus        82 i~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~  161 (248)
                      +|+|+...+.......+..+++|+.||.+++++|.+.+++++||+||...+.+...   ...-+|+.|..    .++..+
T Consensus        80 vh~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~v~~lIYtSs~~Vvf~g~~---~~n~~E~~p~p----~~~~d~  152 (361)
T KOG1430|consen   80 VHCAASPVPDFVENDRDLAMRVNVNGTLNVIEACKELGVKRLIYTSSAYVVFGGEP---IINGDESLPYP----LKHIDP  152 (361)
T ss_pred             EEeccccCccccccchhhheeecchhHHHHHHHHHHhCCCEEEEecCceEEeCCee---cccCCCCCCCc----cccccc
Confidence            88877655544444457889999999999999999999999999999887665422   12223333322    334456


Q ss_pred             HHHHHHHHHHHHHHHHHhCCccEEEEccCeeecCCCCCCCCccHHHHHHHHcCCC
Q 025755          162 YCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKGFF  216 (248)
Q Consensus       162 Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~~~~  216 (248)
                      |+.||+.+|.++.+.....++..+++||..||||.+..   ..+....-+..+.+
T Consensus       153 Y~~sKa~aE~~Vl~an~~~~l~T~aLR~~~IYGpgd~~---~~~~i~~~~~~g~~  204 (361)
T KOG1430|consen  153 YGESKALAEKLVLEANGSDDLYTCALRPPGIYGPGDKR---LLPKIVEALKNGGF  204 (361)
T ss_pred             cchHHHHHHHHHHHhcCCCCeeEEEEccccccCCCCcc---ccHHHHHHHHccCc
Confidence            99999999999999886556999999999999999874   44445555555553

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=99.94  E-value=8.5e-26  Score=182.67  Aligned_cols=180  Identities=28%  Similarity=0.266  Sum_probs=152.7

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCC--chhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC--CCCEE
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPC--DEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA--GCTGV   81 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~--~id~v   81 (248)
                      .++||||||+|+||++.+-+|+++|+.|++++.=..  .......+.+.....++.++++|+.|.+.|+++|+  ++|.|
T Consensus         2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~~fd~V   81 (343)
T KOG1371|consen    2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEVKFDAV   81 (343)
T ss_pred             CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhcCCceE
Confidence            579999999999999999999999999999875221  11223334444446789999999999999999998  57999


Q ss_pred             EEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccccch
Q 025755           82 FHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENY  161 (248)
Q Consensus        82 i~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~  161 (248)
                      +|.|+....+.+...+..++..|+.|+.++++.|++.+.+.+||.||+ .+|+.+.   ..|++|+++..     +|.++
T Consensus        82 ~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~~~~~V~sssa-tvYG~p~---~ip~te~~~t~-----~p~~p  152 (343)
T KOG1371|consen   82 MHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAHNVKALVFSSSA-TVYGLPT---KVPITEEDPTD-----QPTNP  152 (343)
T ss_pred             EeehhhhccchhhhCchhheehhhhhHHHHHHHHHHcCCceEEEecce-eeecCcc---eeeccCcCCCC-----CCCCc
Confidence            999999888777677799999999999999999999999999999995 5788765   67788877654     24566


Q ss_pred             HHHHHHHHHHHHHHHHHhCCccEEEEccCeeec
Q 025755          162 YCLAKTIAEIQALEYAKRGELDIVTVCPSIVIG  194 (248)
Q Consensus       162 Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g  194 (248)
                      ||.+|.+.|.++..+...++.++..+|-.+++|
T Consensus       153 yg~tK~~iE~i~~d~~~~~~~~~~~LRyfn~~g  185 (343)
T KOG1371|consen  153 YGKTKKAIEEIIHDYNKAYGWKVTGLRYFNVIG  185 (343)
T ss_pred             chhhhHHHHHHHHhhhccccceEEEEEeccccC
Confidence            999999999999999988889999999999999

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.94  E-value=4.7e-26  Score=196.48  Aligned_cols=204  Identities=24%  Similarity=0.196  Sum_probs=167.5

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCC-eEEEEEcCCCchhhHHhhhhcCC--CCCeEEEEccCCCHHHHHHHhCC--C
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGY-MVHGTVRDPCDEKNAHLKKLEGA--SENLQLFKTDLLDYEALCAATAG--C   78 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Di~d~~~~~~~~~~--i   78 (248)
                      +++|+|+||||+|.||+++++++++.+. ++++++|+..+ ..+...++...  ..++.++-+|++|.+.+++++++  +
T Consensus       248 ~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~-~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~kv  326 (588)
T COG1086         248 LTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYK-LYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGHKV  326 (588)
T ss_pred             cCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHH-HHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcCCC
Confidence            6899999999999999999999999885 67788887643 33333333332  46788999999999999999997  9


Q ss_pred             CEEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccc
Q 025755           79 TGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKAT  158 (248)
Q Consensus        79 d~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~  158 (248)
                      |+|+|+|+.-...-++.++.+.+++|+.||.|++++|.+.+++++|.+||.-+++|                        
T Consensus       327 d~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~V~~~V~iSTDKAV~P------------------------  382 (588)
T COG1086         327 DIVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNGVKKFVLISTDKAVNP------------------------  382 (588)
T ss_pred             ceEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHhCCCEEEEEecCcccCC------------------------
Confidence            99999999888777888889999999999999999999999999999999777654                        


Q ss_pred             cchHHHHHHHHHHHHHHHHHhC---CccEEEEccCeeecCCCCCCCCccHHHHHHHHcCCCCCCCCCchhhhhhhhhccc
Q 025755          159 ENYYCLAKTIAEIQALEYAKRG---ELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKGFFFTTPSHSYMLERTLVLNQG  235 (248)
Q Consensus       159 ~~~Y~~sK~~~e~l~~~~~~~~---~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~l~vd~g  235 (248)
                      .|.||.||.++|.+...+....   +.++.+||.|+|.|...    ...+.|.+++.+|.++.. .+..+|+-.+.++.+
T Consensus       383 tNvmGaTKr~aE~~~~a~~~~~~~~~T~f~~VRFGNVlGSrG----SViPlFk~QI~~GgplTv-Tdp~mtRyfMTI~EA  457 (588)
T COG1086         383 TNVMGATKRLAEKLFQAANRNVSGTGTRFCVVRFGNVLGSRG----SVIPLFKKQIAEGGPLTV-TDPDMTRFFMTIPEA  457 (588)
T ss_pred             chHhhHHHHHHHHHHHHHhhccCCCCcEEEEEEecceecCCC----CCHHHHHHHHHcCCCccc-cCCCceeEEEEHHHH
Confidence            3559999999999999998743   38999999999999765    378889999999975543 345555555555554


Q ss_pred             ee
Q 025755          236 VR  237 (248)
Q Consensus       236 ~~  237 (248)
                      +.
T Consensus       458 v~  459 (588)
T COG1086         458 VQ  459 (588)
T ss_pred             HH
Confidence            43

>PRK06139 short chain dehydrogenase; Provisional

Probab=99.94  E-value=9e-26  Score=190.83  Aligned_cols=175  Identities=18%  Similarity=0.182  Sum_probs=135.5

Q ss_pred             CCCCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC----
Q 025755            1 MSGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA----   76 (248)
Q Consensus         1 m~~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~----   76 (248)
                      |+.+++|+++||||+||||+++++.|+++|++|++++|+.+. .....+.+.....++.++.+|++|.++++++++    
T Consensus         2 ~~~l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~-l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~   80 (330)
T PRK06139          2 MGPLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEA-LQAVAEECRALGAEVLVVPTDVTDADQVKALATQAAS   80 (330)
T ss_pred             CcCCCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHH-HHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHH
Confidence            445788999999999999999999999999999999998643 233333343445678889999999999888774    


Q ss_pred             ---CCCEEEEccccCCCCCCC----CccccchhhhHHHHHHHHHHHH----hcCCCEEEEEeccceeccCCCCCCCCccC
Q 025755           77 ---GCTGVFHVACPVPVGKVP----NPEVQLIDPAVVGTKNVLNSCV----KAKVKRVVVVSSIGAVMLNPNWPKGQVMD  145 (248)
Q Consensus        77 ---~id~vi~~ag~~~~~~~~----~~~~~~~~~n~~g~~~~~~~~~----~~~~~~iV~vSS~~~~~~~~~~~~~~~~~  145 (248)
                         .+|++|||||........    +.+...+++|+.++.++.+++.    +.+.++||++||..++.+.+....     
T Consensus        81 ~~g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~~~~p~~~~-----  155 (330)
T PRK06139         81 FGGRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFAAQPYAAA-----  155 (330)
T ss_pred             hcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhcCCCCCchh-----
Confidence               589999999976543222    3345689999999888777764    445689999999877666554333     


Q ss_pred             CCCCCchhhhccccchHHHHHH----HHHHHHHHHHHhCCccEEEEccCeeecCCC
Q 025755          146 EECWSDEEFCKATENYYCLAKT----IAEIQALEYAKRGELDIVTVCPSIVIGPML  197 (248)
Q Consensus       146 e~~~~~~~~~~~~~~~Y~~sK~----~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~  197 (248)
                                      |+.||.    +++.+..++.+..+++|++|+||.+.+|+.
T Consensus       156 ----------------Y~asKaal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~  195 (330)
T PRK06139        156 ----------------YSASKFGLRGFSEALRGELADHPDIHVCDVYPAFMDTPGF  195 (330)
T ss_pred             ----------------HHHHHHHHHHHHHHHHHHhCCCCCeEEEEEecCCccCccc
Confidence                            999997    567777776544469999999999999864

>PRK07069 short chain dehydrogenase; Validated

Probab=99.94  E-value=9.6e-26  Score=183.77  Aligned_cols=210  Identities=17%  Similarity=0.219  Sum_probs=146.8

Q ss_pred             EEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCC--CCCeEEEEccCCCHHHHHHHhC-------CC
Q 025755            8 RVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGA--SENLQLFKTDLLDYEALCAATA-------GC   78 (248)
Q Consensus         8 ~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Di~d~~~~~~~~~-------~i   78 (248)
                      +++||||+|+||+++++.|+++|++|++++|+..+......+.+...  ...+..+.+|++|.++++++++       ++
T Consensus         1 ~ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   80 (251)
T PRK07069          1 RAFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGL   80 (251)
T ss_pred             CEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence            48999999999999999999999999999998433232333333221  1235568899999998877764       57


Q ss_pred             CEEEEccccCCCCCC----CCccccchhhhHH----HHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCC
Q 025755           79 TGVFHVACPVPVGKV----PNPEVQLIDPAVV----GTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWS  150 (248)
Q Consensus        79 d~vi~~ag~~~~~~~----~~~~~~~~~~n~~----g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~  150 (248)
                      |+||||||.......    .+++...+++|+.    ++..+++++++.+.++||++||..++.+.+....          
T Consensus        81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~~~~~~~~~~~----------  150 (251)
T PRK07069         81 SVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSVAAFKAEPDYTA----------  150 (251)
T ss_pred             cEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChhhccCCCCCch----------
Confidence            999999997654322    1234567889988    5677777777777789999999877666544333          


Q ss_pred             chhhhccccchHHHHHHHHHHHHHHHHHh----C-CccEEEEccCeeecCCCCCCCC--ccHHHHHHHHcC----C----
Q 025755          151 DEEFCKATENYYCLAKTIAEIQALEYAKR----G-ELDIVTVCPSIVIGPMLQPTIN--TSSLLLLGFLKG----F----  215 (248)
Q Consensus       151 ~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~----~-~i~v~~vrpg~i~g~~~~~~~~--~~~~~~~~~~~~----~----  215 (248)
                                 |+.+|...+.+++.++.+    + ++++++|+||.+.+|+......  ........+..+    .    
T Consensus       151 -----------Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (251)
T PRK07069        151 -----------YNASKAAVASLTKSIALDCARRGLDVRCNSIHPTFIRTGIVDPIFQRLGEEEATRKLARGVPLGRLGEP  219 (251)
T ss_pred             -----------hHHHHHHHHHHHHHHHHHhcccCCcEEEEEEeecccCCcchhHHhhhccchhHHHHHhccCCCCCCcCH
Confidence                       999998766666655543    2 5999999999999997542100  001111111110    0    


Q ss_pred             --------CCCCCCCchhhhhhhhhccceeE
Q 025755          216 --------FFTTPSHSYMLERTLVLNQGVRL  238 (248)
Q Consensus       216 --------~l~~~~~~~~~g~~l~vd~g~~~  238 (248)
                              ++..+...+++|+.+.+|||.++
T Consensus       220 ~~va~~~~~l~~~~~~~~~g~~i~~~~g~~~  250 (251)
T PRK07069        220 DDVAHAVLYLASDESRFVTGAELVIDGGICA  250 (251)
T ss_pred             HHHHHHHHHHcCccccCccCCEEEECCCeec
Confidence                    45566678999999999999775

>PRK05854 short chain dehydrogenase; Provisional

Probab=99.94  E-value=1.9e-25  Score=188.00  Aligned_cols=188  Identities=20%  Similarity=0.146  Sum_probs=138.6

Q ss_pred             CCCCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCC--CCCeEEEEccCCCHHHHHHHhC--
Q 025755            1 MSGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGA--SENLQLFKTDLLDYEALCAATA--   76 (248)
Q Consensus         1 m~~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Di~d~~~~~~~~~--   76 (248)
                      |+++++|+++||||++|||+++++.|+++|++|++++|+.++. ....+.+...  ..++.++.+|+.|.++++++++  
T Consensus         9 ~~~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~-~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~   87 (313)
T PRK05854          9 VPDLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKG-EAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQL   87 (313)
T ss_pred             CcccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHH
Confidence            4568899999999999999999999999999999999986432 2222333221  2468899999999999888765  


Q ss_pred             -----CCCEEEEccccCCCCC---CCCccccchhhhHHHHHHHHHHHHhc---CCCEEEEEeccceeccCCCCCCCCccC
Q 025755           77 -----GCTGVFHVACPVPVGK---VPNPEVQLIDPAVVGTKNVLNSCVKA---KVKRVVVVSSIGAVMLNPNWPKGQVMD  145 (248)
Q Consensus        77 -----~id~vi~~ag~~~~~~---~~~~~~~~~~~n~~g~~~~~~~~~~~---~~~~iV~vSS~~~~~~~~~~~~~~~~~  145 (248)
                           .+|++|||||......   ..+.++..+++|+.+...+.+.+.+.   +.++||++||.....+...+   ..+.
T Consensus        88 ~~~~~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~~~riv~vsS~~~~~~~~~~---~~~~  164 (313)
T PRK05854         88 RAEGRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAGRARVTSQSSIAARRGAINW---DDLN  164 (313)
T ss_pred             HHhCCCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhCCCCeEEEechhhcCCCcCc---cccc
Confidence                 4899999999764321   23556778999999988877777642   34799999998765543221   1122


Q ss_pred             CCCCCchhhhccccchHHHHHHHHHHHHHHHHHh-----CCccEEEEccCeeecCCCC
Q 025755          146 EECWSDEEFCKATENYYCLAKTIAEIQALEYAKR-----GELDIVTVCPSIVIGPMLQ  198 (248)
Q Consensus       146 e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~-----~~i~v~~vrpg~i~g~~~~  198 (248)
                      ++..      ..+...|+.||.+...++++++.+     .+++|++++||.+.+++..
T Consensus       165 ~~~~------~~~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~~~~  216 (313)
T PRK05854        165 WERS------YAGMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTNLLA  216 (313)
T ss_pred             cccc------CcchhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccCccc
Confidence            2211      122355999999888888888753     3699999999999998753

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.94  E-value=9e-26  Score=183.07  Aligned_cols=213  Identities=20%  Similarity=0.164  Sum_probs=151.1

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC------
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA------   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~------   76 (248)
                      ++++|+++||||+|+||+++++.|+++|++|++++|+.... ......+.....++.++.+|++|.+++.++++      
T Consensus         2 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (246)
T PRK05653          2 SLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAA-EALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAF   80 (246)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHH-HHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence            47789999999999999999999999999999999986432 22233333345678899999999998877765      


Q ss_pred             -CCCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHH----hcCCCEEEEEeccceeccCCCCCCCCccCCC
Q 025755           77 -GCTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCV----KAKVKRVVVVSSIGAVMLNPNWPKGQVMDEE  147 (248)
Q Consensus        77 -~id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~----~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~  147 (248)
                       .+|+|||+||.......    .+.+...++.|+.+..++++++.    +.+.++||++||..+..+....         
T Consensus        81 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~~~~~~~---------  151 (246)
T PRK05653         81 GALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGVTGNPGQ---------  151 (246)
T ss_pred             CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhccCCCCC---------
Confidence             36999999997654321    22345678999999999888885    4466899999997665544322         


Q ss_pred             CCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCCCccHHHH------------HHHH
Q 025755          148 CWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTINTSSLLL------------LGFL  212 (248)
Q Consensus       148 ~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~~~~~~~~------------~~~~  212 (248)
                                  ..|+.+|.+.+.+++.++.+   .+++++++|||.++++.............            ..+.
T Consensus       152 ------------~~y~~sk~~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva  219 (246)
T PRK05653        152 ------------TNYSAAKAGVIGFTKALALELASRGITVNAVAPGFIDTDMTEGLPEEVKAEILKEIPLGRLGQPEEVA  219 (246)
T ss_pred             ------------cHhHhHHHHHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchhhhhHHHHHHHHhcCCCCCCcCHHHHH
Confidence                        23999998777777776643   36999999999999987642110000000            0000


Q ss_pred             cC-CCCCCCCCchhhhhhhhhcccee
Q 025755          213 KG-FFFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       213 ~~-~~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                      +. .++......+++|+++.++||..
T Consensus       220 ~~~~~~~~~~~~~~~g~~~~~~gg~~  245 (246)
T PRK05653        220 NAVAFLASDAASYITGQVIPVNGGMY  245 (246)
T ss_pred             HHHHHHcCchhcCccCCEEEeCCCee
Confidence            00 03334445678999999999865

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=99.94  E-value=1.4e-25  Score=181.74  Aligned_cols=207  Identities=18%  Similarity=0.168  Sum_probs=144.8

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-------CCC
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-------GCT   79 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-------~id   79 (248)
                      |+++||||+|+||+++++.|+++|++|+++.|...+..............++.++.+|++|.++++++++       .+|
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPID   80 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCc
Confidence            6899999999999999999999999999998843222222222222234578899999999988877664       489


Q ss_pred             EEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHH----HhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCc
Q 025755           80 GVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSC----VKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSD  151 (248)
Q Consensus        80 ~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~----~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~  151 (248)
                      +||||||.......    .+.+...+++|+.++..+++.+    ++.+.++||++||..+..+.+...            
T Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~------------  148 (242)
T TIGR01829        81 VLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISSVNGQKGQFGQT------------  148 (242)
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCCCcc------------
Confidence            99999997643211    2344667899999987765554    455678999999976655443322            


Q ss_pred             hhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCCCccHHHHHHHHcC--------------
Q 025755          152 EEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKG--------------  214 (248)
Q Consensus       152 ~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~~--------------  214 (248)
                               .|+.+|...+.+++.++.+   .++++++++||++.+|......   +.....+...              
T Consensus       149 ---------~y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~a~  216 (242)
T TIGR01829       149 ---------NYSAAKAGMIGFTKALAQEGATKGVTVNTISPGYIATDMVMAMR---EDVLNSIVAQIPVGRLGRPEEIAA  216 (242)
T ss_pred             ---------hhHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCCCcCccccccc---hHHHHHHHhcCCCCCCcCHHHHHH
Confidence                     2999998555555554432   3699999999999998754321   1111111110              


Q ss_pred             --CCCCCCCCchhhhhhhhhcccee
Q 025755          215 --FFFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       215 --~~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                        .++..+...+++|+.+.+|||..
T Consensus       217 ~~~~l~~~~~~~~~G~~~~~~gg~~  241 (242)
T TIGR01829       217 AVAFLASEEAGYITGATLSINGGLY  241 (242)
T ss_pred             HHHHHcCchhcCccCCEEEecCCcc
Confidence              15666667789999999999964

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK06198 short chain dehydrogenase; Provisional

Probab=99.94  E-value=1.8e-25  Score=183.20  Aligned_cols=214  Identities=16%  Similarity=0.118  Sum_probs=152.9

Q ss_pred             CCCCCCcEEEEEcCccHHHHHHHHHHHHCCCe-EEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC---
Q 025755            1 MSGEDKERVCVTGAGGYIASWLVKYLLLKGYM-VHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA---   76 (248)
Q Consensus         1 m~~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~---   76 (248)
                      |..+++|+++||||+|+||+.+++.|+++|++ |++++|+..+.. .....+.....++.++.+|++|.+++.++++   
T Consensus         1 ~~~~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~-~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~   79 (260)
T PRK06198          1 MGRLDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGE-AQAAELEALGAKAVFVQADLSDVEDCRRVVAAAD   79 (260)
T ss_pred             CCCCCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHH-HHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHH
Confidence            66788999999999999999999999999999 999998754322 2222333334568889999999998888765   


Q ss_pred             ----CCCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHHhc----C-CCEEEEEeccceeccCCCCCCCCc
Q 025755           77 ----GCTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCVKA----K-VKRVVVVSSIGAVMLNPNWPKGQV  143 (248)
Q Consensus        77 ----~id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~~~----~-~~~iV~vSS~~~~~~~~~~~~~~~  143 (248)
                          ++|+||||||.......    .+.+...+++|+.++.++++++.+.    + .+++|++||..++.+.+...    
T Consensus        80 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~----  155 (260)
T PRK06198         80 EAFGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQPFLA----  155 (260)
T ss_pred             HHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCCCCcc----
Confidence                58999999997653321    2334567899999999998887653    2 36899999977665544322    


Q ss_pred             cCCCCCCchhhhccccchHHHHHHHHHHHHHHHHHhC---CccEEEEccCeeecCCCCCC----CCccHHHHHHHHc---
Q 025755          144 MDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKRG---ELDIVTVCPSIVIGPMLQPT----INTSSLLLLGFLK---  213 (248)
Q Consensus       144 ~~e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~---~i~v~~vrpg~i~g~~~~~~----~~~~~~~~~~~~~---  213 (248)
                                       .|+.+|...+.+++.++.+.   +++++.++||++++++....    ......++.....   
T Consensus       156 -----------------~Y~~sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (260)
T PRK06198        156 -----------------AYCASKGALATLTRNAAYALLRNRIRVNGLNIGWMATEGEDRIQREFHGAPDDWLEKAAATQP  218 (260)
T ss_pred             -----------------hhHHHHHHHHHHHHHHHHHhcccCeEEEEEeeccccCcchhhhhhhccCCChHHHHHHhccCC
Confidence                             39999988877777666533   59999999999999864210    0011111111110   


Q ss_pred             -CC------------CCCCCCCchhhhhhhhhccce
Q 025755          214 -GF------------FFTTPSHSYMLERTLVLNQGV  236 (248)
Q Consensus       214 -~~------------~l~~~~~~~~~g~~l~vd~g~  236 (248)
                       ++            ++..+...+++|+++.+|+|.
T Consensus       219 ~~~~~~~~~~a~~~~~l~~~~~~~~~G~~~~~~~~~  254 (260)
T PRK06198        219 FGRLLDPDEVARAVAFLLSDESGLMTGSVIDFDQSV  254 (260)
T ss_pred             ccCCcCHHHHHHHHHHHcChhhCCccCceEeECCcc
Confidence             00            455556779999999999985

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.94  E-value=6.7e-27  Score=190.08  Aligned_cols=182  Identities=26%  Similarity=0.216  Sum_probs=138.1

Q ss_pred             EEEEcCccHHHHHHHHHHHHCC-CeEEEEEcCCCchhhHHhhhhcC--CCCCeE----EEEccCCCHHHHHHHhC--CCC
Q 025755            9 VCVTGAGGYIASWLVKYLLLKG-YMVHGTVRDPCDEKNAHLKKLEG--ASENLQ----LFKTDLLDYEALCAATA--GCT   79 (248)
Q Consensus         9 vlVtG~~g~iG~~~~~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~----~~~~Di~d~~~~~~~~~--~id   79 (248)
                      ||||||+|.||++++++|++.+ .++++++++... ......++..  ...++.    .+-+|++|.+.+..+++  ++|
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~-l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~~pd   79 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENK-LYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEYKPD   79 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHH-HHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT--T-S
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhH-HHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhcCCC
Confidence            7999999999999999999988 479999998642 2222223321  123444    44799999999999999  899


Q ss_pred             EEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhcccc
Q 025755           80 GVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATE  159 (248)
Q Consensus        80 ~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~  159 (248)
                      +|+|.|+.-....+++.+.+.+++|+.|+.|++++|.+.+++++|++||.-++.+                        .
T Consensus        80 iVfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~~v~~~v~ISTDKAv~P------------------------t  135 (293)
T PF02719_consen   80 IVFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEHGVERFVFISTDKAVNP------------------------T  135 (293)
T ss_dssp             EEEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHTT-SEEEEEEECGCSS--------------------------
T ss_pred             EEEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccccCCC------------------------C
Confidence            9999999877666677889999999999999999999999999999999766543                        3


Q ss_pred             chHHHHHHHHHHHHHHHHHhC---CccEEEEccCeeecCCCCCCCCccHHHHHHHHcCCCCCC
Q 025755          160 NYYCLAKTIAEIQALEYAKRG---ELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKGFFFTT  219 (248)
Q Consensus       160 ~~Y~~sK~~~e~l~~~~~~~~---~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~~~~l~~  219 (248)
                      |.||+||.++|.++..++...   +.++.+||.|+|.|...    ...+.|.+++.+|.++..
T Consensus       136 nvmGatKrlaE~l~~~~~~~~~~~~t~f~~VRFGNVlgS~G----SVip~F~~Qi~~g~PlTv  194 (293)
T PF02719_consen  136 NVMGATKRLAEKLVQAANQYSGNSDTKFSSVRFGNVLGSRG----SVIPLFKKQIKNGGPLTV  194 (293)
T ss_dssp             SHHHHHHHHHHHHHHHHCCTSSSS--EEEEEEE-EETTGTT----SCHHHHHHHHHTTSSEEE
T ss_pred             cHHHHHHHHHHHHHHHHhhhCCCCCcEEEEEEecceecCCC----cHHHHHHHHHHcCCccee
Confidence            559999999999999998765   68999999999998765    388899999999986654

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>PRK07074 short chain dehydrogenase; Provisional

Probab=99.94  E-value=2.6e-25  Score=182.05  Aligned_cols=208  Identities=19%  Similarity=0.147  Sum_probs=148.7

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-------CC
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-------GC   78 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-------~i   78 (248)
                      +|+++||||+|+||+++++.|+++|++|++++|+.... ....+.+  ...++.++.+|+.|.+++.++++       ++
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~-~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAAL-AAFADAL--GDARFVPVACDLTDAASLAAALANAAAERGPV   78 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHHh--cCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            57999999999999999999999999999999976422 2222222  13468899999999999887775       48


Q ss_pred             CEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHHh----cCCCEEEEEeccceeccCCCCCCCCccCCCCCC
Q 025755           79 TGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCVK----AKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWS  150 (248)
Q Consensus        79 d~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~~----~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~  150 (248)
                      |+|||++|.......    .+.+...+++|+.++.++++++.+    .+.++||++||..+... ....           
T Consensus        79 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~-~~~~-----------  146 (257)
T PRK07074         79 DVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGMAA-LGHP-----------  146 (257)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcCC-CCCc-----------
Confidence            999999997654322    122345678999999888888843    45679999999654321 1111           


Q ss_pred             chhhhccccchHHHHHHHHHHHHHHHHHhC---CccEEEEccCeeecCCCCCCCCccHHHHHHHHc----CC--------
Q 025755          151 DEEFCKATENYYCLAKTIAEIQALEYAKRG---ELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLK----GF--------  215 (248)
Q Consensus       151 ~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~---~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~----~~--------  215 (248)
                                .|+.+|++.+.+++.++.++   ++++++++||+++++...........+......    +.        
T Consensus       147 ----------~y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a  216 (257)
T PRK07074        147 ----------AYSAAKAGLIHYTKLLAVEYGRFGIRANAVAPGTVKTQAWEARVAANPQVFEELKKWYPLQDFATPDDVA  216 (257)
T ss_pred             ----------ccHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCCcchhhcccccChHHHHHHHhcCCCCCCCCHHHHH
Confidence                      29999987777777776543   699999999999998754321111222222111    11        


Q ss_pred             ----CCCCCCCchhhhhhhhhccceeE
Q 025755          216 ----FFTTPSHSYMLERTLVLNQGVRL  238 (248)
Q Consensus       216 ----~l~~~~~~~~~g~~l~vd~g~~~  238 (248)
                          ++..+...+++|+++.+|||..+
T Consensus       217 ~~~~~l~~~~~~~~~g~~~~~~~g~~~  243 (257)
T PRK07074        217 NAVLFLASPAARAITGVCLPVDGGLTA  243 (257)
T ss_pred             HHHHHHcCchhcCcCCcEEEeCCCcCc
Confidence                45556678999999999999776

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=99.94  E-value=6.3e-26  Score=188.54  Aligned_cols=196  Identities=19%  Similarity=0.132  Sum_probs=148.2

Q ss_pred             EEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCC--CEEEEcc
Q 025755            8 RVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGC--TGVFHVA   85 (248)
Q Consensus         8 ~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~i--d~vi~~a   85 (248)
                      +|+||||+|+||++++++|+++|++|+++.|+                      .+|+.|.+++.++++++  |+|||+|
T Consensus         1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~----------------------~~d~~~~~~~~~~~~~~~~d~vi~~a   58 (287)
T TIGR01214         1 RILITGANGQLGRELVQQLSPEGRVVVALTSS----------------------QLDLTDPEALERLLRAIRPDAVVNTA   58 (287)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc----------------------ccCCCCHHHHHHHHHhCCCCEEEECC
Confidence            58999999999999999999999999998874                      37999999999999865  9999999


Q ss_pred             ccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccccchHHHH
Q 025755           86 CPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLA  165 (248)
Q Consensus        86 g~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~s  165 (248)
                      +..........+...+++|+.++.++++++++.+. ++|++||.. +|+...   ..+++|+++..+      .+.|+.+
T Consensus        59 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~v~~Ss~~-vy~~~~---~~~~~E~~~~~~------~~~Y~~~  127 (287)
T TIGR01214        59 AYTDVDGAESDPEKAFAVNALAPQNLARAAARHGA-RLVHISTDY-VFDGEG---KRPYREDDATNP------LNVYGQS  127 (287)
T ss_pred             ccccccccccCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEeeee-eecCCC---CCCCCCCCCCCC------cchhhHH
Confidence            97654322334466889999999999999998874 899999965 444322   456777766543      4569999


Q ss_pred             HHHHHHHHHHHHHhCCccEEEEccCeeecCCCCCCCCccHHHHHHHHcCCCCCCCCCchhhhhhhhhccceeEEEeecc
Q 025755          166 KTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKGFFFTTPSHSYMLERTLVLNQGVRLYRCKIQ  244 (248)
Q Consensus       166 K~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~l~vd~g~~~~~~~~~  244 (248)
                      |..+|.++..+    +.+++++||+.+|||....  .....++..+..+..+....+.  .++.+++|+...++..++.
T Consensus       128 K~~~E~~~~~~----~~~~~ilR~~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~Dva~a~~~~~~  198 (287)
T TIGR01214       128 KLAGEQAIRAA----GPNALIVRTSWLYGGGGGR--NFVRTMLRLAGRGEELRVVDDQ--IGSPTYAKDLARVIAALLQ  198 (287)
T ss_pred             HHHHHHHHHHh----CCCeEEEEeeecccCCCCC--CHHHHHHHHhhcCCCceEecCC--CcCCcCHHHHHHHHHHHHh
Confidence            99999988775    4799999999999998432  2344556655555443333322  2456788887776655554

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>TIGR02415 23BDH acetoin reductases

Probab=99.94  E-value=1.3e-25  Score=183.27  Aligned_cols=209  Identities=17%  Similarity=0.209  Sum_probs=150.5

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-------CCC
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-------GCT   79 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-------~id   79 (248)
                      |+++|||++|+||+++++.|+++|++|++++|+... .......+.....++.++.+|++|++++.++++       .+|
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~-~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id   79 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEET-AKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFD   79 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            689999999999999999999999999999987532 222223333334568899999999999888764       479


Q ss_pred             EEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHHh----cC-CCEEEEEeccceeccCCCCCCCCccCCCCCC
Q 025755           80 GVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCVK----AK-VKRVVVVSSIGAVMLNPNWPKGQVMDEECWS  150 (248)
Q Consensus        80 ~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~~----~~-~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~  150 (248)
                      +||||||.......    .+.+...+++|+.++..+++++.+    .+ .+++|++||..+.++.+....          
T Consensus        80 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~----------  149 (254)
T TIGR02415        80 VMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEGNPILSA----------  149 (254)
T ss_pred             EEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCCCCCCcc----------
Confidence            99999998654321    233457799999998877766653    33 379999999887776654444          


Q ss_pred             chhhhccccchHHHHHHHHHHHHHHHHHhC---CccEEEEccCeeecCCCCCCCCc------------cHHHHHHHHcCC
Q 025755          151 DEEFCKATENYYCLAKTIAEIQALEYAKRG---ELDIVTVCPSIVIGPMLQPTINT------------SSLLLLGFLKGF  215 (248)
Q Consensus       151 ~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~---~i~v~~vrpg~i~g~~~~~~~~~------------~~~~~~~~~~~~  215 (248)
                                 |+.+|++.+.+++.++.+.   ++++++++||.+.+++.......            ...+......++
T Consensus       150 -----------Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (254)
T TIGR02415       150 -----------YSSTKFAVRGLTQTAAQELAPKGITVNAYCPGIVKTPMWEEIDEETSEIAGKPIGEGFEEFSSEIALGR  218 (254)
T ss_pred             -----------hHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccChhhhhhhhhhhhcccCchHHHHHHHHhhCCCCC
Confidence                       9999988777777666543   69999999999999874321100            001111111111


Q ss_pred             ------------CCCCCCCchhhhhhhhhcccee
Q 025755          216 ------------FFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       216 ------------~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                                  ++......+++|+++.+|||..
T Consensus       219 ~~~~~~~a~~~~~l~~~~~~~~~g~~~~~d~g~~  252 (254)
T TIGR02415       219 PSEPEDVAGLVSFLASEDSDYITGQSILVDGGMV  252 (254)
T ss_pred             CCCHHHHHHHHHhhcccccCCccCcEEEecCCcc
Confidence                        5666677899999999999854

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK07024 short chain dehydrogenase; Provisional

Probab=99.94  E-value=2.1e-25  Score=182.70  Aligned_cols=169  Identities=21%  Similarity=0.172  Sum_probs=129.9

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCC-------C
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAG-------C   78 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~-------i   78 (248)
                      +|+++||||+|+||+++++.|+++|++|++++|+.+. .....+.+... .++.++.+|++|.+++.++++.       +
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~-~~~~~~~~~~~-~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~i   79 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDA-LQAFAARLPKA-ARVSVYAADVRDADALAAAAADFIAAHGLP   79 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHhcccC-CeeEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence            4799999999999999999999999999999998632 22222223222 2788999999999998887653       7


Q ss_pred             CEEEEccccCCCCCC-----CCccccchhhhHHHHHHHHHH----HHhcCCCEEEEEeccceeccCCCCCCCCccCCCCC
Q 025755           79 TGVFHVACPVPVGKV-----PNPEVQLIDPAVVGTKNVLNS----CVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECW  149 (248)
Q Consensus        79 d~vi~~ag~~~~~~~-----~~~~~~~~~~n~~g~~~~~~~----~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~  149 (248)
                      |++|||||.......     .+.++..+++|+.++.++++.    +++.+.++||++||..++.+.+....         
T Consensus        80 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~~~~~~~~~~---------  150 (257)
T PRK07024         80 DVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAGVRGLPGAGA---------  150 (257)
T ss_pred             CEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCCCCcc---------
Confidence            999999997543211     134567899999999887764    44556689999999887766554333         


Q ss_pred             CchhhhccccchHHHHHHHHHHHHHHHHH---hCCccEEEEccCeeecCCC
Q 025755          150 SDEEFCKATENYYCLAKTIAEIQALEYAK---RGELDIVTVCPSIVIGPML  197 (248)
Q Consensus       150 ~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~---~~~i~v~~vrpg~i~g~~~  197 (248)
                                  |+.||++.+.+.+.++.   ..++++++++||.+.+++.
T Consensus       151 ------------Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~  189 (257)
T PRK07024        151 ------------YSASKAAAIKYLESLRVELRPAGVRVVTIAPGYIRTPMT  189 (257)
T ss_pred             ------------hHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCcCchh
Confidence                        99999877777766653   3479999999999999864

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=99.94  E-value=4.9e-25  Score=179.12  Aligned_cols=207  Identities=15%  Similarity=0.108  Sum_probs=142.4

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCCeEEEEE-cCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-------C
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGYMVHGTV-RDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-------G   77 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-------~   77 (248)
                      ||+++||||+|+||+++++.|+++|++|++.. |+. +........+.....++.++++|++|.++++++++       +
T Consensus         1 ~~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~   79 (247)
T PRK09730          1 MAIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNL-HAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEP   79 (247)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCh-HHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCC
Confidence            47999999999999999999999999998754 443 22223333333334568889999999999888776       4


Q ss_pred             CCEEEEccccCCCCCC-----CCccccchhhhHHHHHHHHHHHHhc-------CCCEEEEEeccceeccCCCCCCCCccC
Q 025755           78 CTGVFHVACPVPVGKV-----PNPEVQLIDPAVVGTKNVLNSCVKA-------KVKRVVVVSSIGAVMLNPNWPKGQVMD  145 (248)
Q Consensus        78 id~vi~~ag~~~~~~~-----~~~~~~~~~~n~~g~~~~~~~~~~~-------~~~~iV~vSS~~~~~~~~~~~~~~~~~  145 (248)
                      +|+|||+||.......     .+.+...+++|+.++.++++++.+.       +.++||++||..++++.+..       
T Consensus        80 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~~~~-------  152 (247)
T PRK09730         80 LAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGAPGE-------  152 (247)
T ss_pred             CCEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCCCCc-------
Confidence            6899999997532211     1234578899999998887776543       23679999998766654321       


Q ss_pred             CCCCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCCCc----------------cHH
Q 025755          146 EECWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTINT----------------SSL  206 (248)
Q Consensus       146 e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~~~----------------~~~  206 (248)
                                   ...|+.+|+..+.+++.++.+   .+++++++|||.++||+.......                .+.
T Consensus       153 -------------~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (247)
T PRK09730        153 -------------YVDYAASKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASGGEPGRVDRVKSNIPMQRGGQPE  219 (247)
T ss_pred             -------------ccchHhHHHHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcccccCCCHHHHHHHHhcCCCCCCcCHH
Confidence                         012999998777776665543   369999999999999975321100                011


Q ss_pred             HHHHHHcCCCCCCCCCchhhhhhhhhccc
Q 025755          207 LLLGFLKGFFFTTPSHSYMLERTLVLNQG  235 (248)
Q Consensus       207 ~~~~~~~~~~l~~~~~~~~~g~~l~vd~g  235 (248)
                      .+....  .++......+++|+.+.+|||
T Consensus       220 dva~~~--~~~~~~~~~~~~g~~~~~~g~  246 (247)
T PRK09730        220 EVAQAI--VWLLSDKASYVTGSFIDLAGG  246 (247)
T ss_pred             HHHHHH--HhhcChhhcCccCcEEecCCC
Confidence            111111  144555567889999998886

>PRK06180 short chain dehydrogenase; Provisional

Probab=99.93  E-value=6.9e-25  Score=181.58  Aligned_cols=169  Identities=18%  Similarity=0.177  Sum_probs=130.8

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-------
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-------   76 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-------   76 (248)
                      +++|+++||||+|+||+++++.|+++|++|++++|+..+. .. +..  ....++.++.+|++|.+++.++++       
T Consensus         2 ~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~-~~-l~~--~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~   77 (277)
T PRK06180          2 SSMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAAR-AD-FEA--LHPDRALARLLDVTDFDAIDAVVADAEATFG   77 (277)
T ss_pred             CCCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHH-HH-HHh--hcCCCeeEEEccCCCHHHHHHHHHHHHHHhC
Confidence            3578999999999999999999999999999999976421 11 111  123468889999999999888776       


Q ss_pred             CCCEEEEccccCCCCCCC----CccccchhhhHHHHHHHHHHHHh----cCCCEEEEEeccceeccCCCCCCCCccCCCC
Q 025755           77 GCTGVFHVACPVPVGKVP----NPEVQLIDPAVVGTKNVLNSCVK----AKVKRVVVVSSIGAVMLNPNWPKGQVMDEEC  148 (248)
Q Consensus        77 ~id~vi~~ag~~~~~~~~----~~~~~~~~~n~~g~~~~~~~~~~----~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~  148 (248)
                      .+|+||||||........    +.+...+++|+.++.++++++.+    .+.++||++||..+..+.+....        
T Consensus        78 ~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~~~~~~~~--------  149 (277)
T PRK06180         78 PIDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLITMPGIGY--------  149 (277)
T ss_pred             CCCEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccCCCCCcch--------
Confidence            479999999986543221    23456789999999999998654    45679999999877665544333        


Q ss_pred             CCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCC
Q 025755          149 WSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPML  197 (248)
Q Consensus       149 ~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~  197 (248)
                                   |+.+|+..+.+++.++.+   .|+++++++||++++++.
T Consensus       150 -------------Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~  188 (277)
T PRK06180        150 -------------YCGSKFALEGISESLAKEVAPFGIHVTAVEPGSFRTDWA  188 (277)
T ss_pred             -------------hHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCcccCcc
Confidence                         999998877777776654   369999999999998764

>PRK06182 short chain dehydrogenase; Validated

Probab=99.93  E-value=2.5e-25  Score=183.83  Aligned_cols=166  Identities=20%  Similarity=0.185  Sum_probs=126.2

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-------
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-------   76 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-------   76 (248)
                      +++|+++||||+|+||++++++|+++|++|++++|+.+..     +.+..  .++.++.+|++|.++++++++       
T Consensus         1 ~~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l-----~~~~~--~~~~~~~~Dv~~~~~~~~~~~~~~~~~~   73 (273)
T PRK06182          1 MQKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKM-----EDLAS--LGVHPLSLDVTDEASIKAAVDTIIAEEG   73 (273)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH-----HHHHh--CCCeEEEeeCCCHHHHHHHHHHHHHhcC
Confidence            3578999999999999999999999999999999986321     11111  247889999999999888876       


Q ss_pred             CCCEEEEccccCCCCCC----CCccccchhhhHHHHH----HHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCC
Q 025755           77 GCTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTK----NVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEEC  148 (248)
Q Consensus        77 ~id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~----~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~  148 (248)
                      ++|+||||||.......    .+.+...+++|+.++.    .+++.+++.+.++||++||..+..+.+..          
T Consensus        74 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~----------  143 (273)
T PRK06182         74 RIDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSGRIINISSMGGKIYTPLG----------  143 (273)
T ss_pred             CCCEEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcCCCCCc----------
Confidence            68999999998654321    2345678899999854    44555566677899999997654433321          


Q ss_pred             CCchhhhccccchHHHHHHHHHHHHHHHHH---hCCccEEEEccCeeecCCC
Q 025755          149 WSDEEFCKATENYYCLAKTIAEIQALEYAK---RGELDIVTVCPSIVIGPML  197 (248)
Q Consensus       149 ~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~---~~~i~v~~vrpg~i~g~~~  197 (248)
                                 ..|+.||++.+.+.+.++.   +.++++++++||++.+|+.
T Consensus       144 -----------~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~  184 (273)
T PRK06182        144 -----------AWYHATKFALEGFSDALRLEVAPFGIDVVVIEPGGIKTEWG  184 (273)
T ss_pred             -----------cHhHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCcccccc
Confidence                       2399999877776655543   3479999999999999864

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=99.93  E-value=3.2e-25  Score=182.63  Aligned_cols=210  Identities=16%  Similarity=0.172  Sum_probs=140.8

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcC-CCCCeEEEEccCCCHHHH----HHHh------
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEG-ASENLQLFKTDLLDYEAL----CAAT------   75 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Di~d~~~~----~~~~------   75 (248)
                      ++++||||++|||++++++|+++|++|++++|+..+......+.+.. ...++.++.+|++|.+++    ++++      
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~   81 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRA   81 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHc
Confidence            58999999999999999999999999999876543333333333322 234577789999998754    3332      


Q ss_pred             -CCCCEEEEccccCCCCCCC----C-----------ccccchhhhHHHHHHHHHHHHhc----------CCCEEEEEecc
Q 025755           76 -AGCTGVFHVACPVPVGKVP----N-----------PEVQLIDPAVVGTKNVLNSCVKA----------KVKRVVVVSSI  129 (248)
Q Consensus        76 -~~id~vi~~ag~~~~~~~~----~-----------~~~~~~~~n~~g~~~~~~~~~~~----------~~~~iV~vSS~  129 (248)
                       .++|+||||||........    .           .+...+++|+.++..+.+++.+.          +.++||++||.
T Consensus        82 ~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~s~  161 (267)
T TIGR02685        82 FGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCDA  161 (267)
T ss_pred             cCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEehhh
Confidence             3589999999975432111    1           24567899999999888876543          12479999886


Q ss_pred             ceeccCCCCCCCCccCCCCCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCCCccHH
Q 025755          130 GAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTINTSSL  206 (248)
Q Consensus       130 ~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~~~~~~  206 (248)
                      .+..+.+.+.                     +|+.||++.+.+++.++.+   .|+++++|+||.+.+|..... .....
T Consensus       162 ~~~~~~~~~~---------------------~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~~~~~~-~~~~~  219 (267)
T TIGR02685       162 MTDQPLLGFT---------------------MYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLPDAMPF-EVQED  219 (267)
T ss_pred             hccCCCcccc---------------------hhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCccccch-hHHHH
Confidence            6544433322                     3999998666666665544   469999999999877643211 00001


Q ss_pred             HHHHHHcC-------------CCCCCCCCchhhhhhhhhccceeE
Q 025755          207 LLLGFLKG-------------FFFTTPSHSYMLERTLVLNQGVRL  238 (248)
Q Consensus       207 ~~~~~~~~-------------~~l~~~~~~~~~g~~l~vd~g~~~  238 (248)
                      +......+             .++..+...+++|+.+.+|||...
T Consensus       220 ~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~~~v~gg~~~  264 (267)
T TIGR02685       220 YRRKVPLGQREASAEQIADVVIFLVSPKAKYITGTCIKVDGGLSL  264 (267)
T ss_pred             HHHhCCCCcCCCCHHHHHHHHHHHhCcccCCcccceEEECCceec
Confidence            11110000             156667788999999999999764

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK07577 short chain dehydrogenase; Provisional

Probab=99.93  E-value=4.2e-25  Score=178.24  Aligned_cols=199  Identities=19%  Similarity=0.131  Sum_probs=141.0

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC------CC
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA------GC   78 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~------~i   78 (248)
                      ++|+++||||+|+||++++++|+++|++|++++|+..+.            ....++.+|++|.++++++++      ++
T Consensus         2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~------------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   69 (234)
T PRK07577          2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDD------------FPGELFACDLADIEQTAATLAQINEIHPV   69 (234)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCcccc------------cCceEEEeeCCCHHHHHHHHHHHHHhCCC
Confidence            568999999999999999999999999999999986420            012578899999998888776      57


Q ss_pred             CEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHH----hcCCCEEEEEeccceeccCCCCCCCCccCCCCCC
Q 025755           79 TGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCV----KAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWS  150 (248)
Q Consensus        79 d~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~----~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~  150 (248)
                      |+||||||.......    .+.+...+++|+.++.++.+++.    +.+.++||++||.. .++.+..            
T Consensus        70 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~-~~~~~~~------------  136 (234)
T PRK07577         70 DAIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRA-IFGALDR------------  136 (234)
T ss_pred             cEEEECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcccc-ccCCCCc------------
Confidence            999999998654322    23445678999999877766664    45678999999965 3443322            


Q ss_pred             chhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCCCccHHHHHHH----HcCC--------
Q 025755          151 DEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTINTSSLLLLGF----LKGF--------  215 (248)
Q Consensus       151 ~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~----~~~~--------  215 (248)
                               .+|+.+|.+.+.+++.++.+   .++++++|+||.+.+++...............    ..++        
T Consensus       137 ---------~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a  207 (234)
T PRK07577        137 ---------TSYSAAKSALVGCTRTWALELAEYGITVNAVAPGPIETELFRQTRPVGSEEEKRVLASIPMRRLGTPEEVA  207 (234)
T ss_pred             ---------hHHHHHHHHHHHHHHHHHHHHHhhCcEEEEEecCcccCcccccccccchhHHHHHhhcCCCCCCcCHHHHH
Confidence                     23999998777666655433   36999999999999986432111111111111    1110        


Q ss_pred             ----CCCCCCCchhhhhhhhhcccee
Q 025755          216 ----FFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       216 ----~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                          ++......+++|+.+.+|||..
T Consensus       208 ~~~~~l~~~~~~~~~g~~~~~~g~~~  233 (234)
T PRK07577        208 AAIAFLLSDDAGFITGQVLGVDGGGS  233 (234)
T ss_pred             HHHHHHhCcccCCccceEEEecCCcc
Confidence                3444456789999999999854

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.93  E-value=1.8e-25  Score=182.26  Aligned_cols=217  Identities=23%  Similarity=0.204  Sum_probs=126.3

Q ss_pred             EEcCccHHHHHHHHHHHHCCC--eEEEEEcCCCch-hhHHh-hhhcC----------CCCCeEEEEccCCCH------HH
Q 025755           11 VTGAGGYIASWLVKYLLLKGY--MVHGTVRDPCDE-KNAHL-KKLEG----------ASENLQLFKTDLLDY------EA   70 (248)
Q Consensus        11 VtG~~g~iG~~~~~~l~~~g~--~V~~~~r~~~~~-~~~~~-~~~~~----------~~~~~~~~~~Di~d~------~~   70 (248)
                      |||||||+|+++.++|++++.  +|+++.|..... ..+.+ +.+..          ...++.++.+|++++      ++
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~   80 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED   80 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence            799999999999999999886  999999987431 12222 22211          157899999999864      56


Q ss_pred             HHHHhCCCCEEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCC---
Q 025755           71 LCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEE---  147 (248)
Q Consensus        71 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~---  147 (248)
                      ...+.+++|+|||||+.....   .+..+..++|+.|+.++++.|...+.++++|+|| +.+.+...    ..+.|.   
T Consensus        81 ~~~L~~~v~~IiH~Aa~v~~~---~~~~~~~~~NV~gt~~ll~la~~~~~~~~~~iST-a~v~~~~~----~~~~~~~~~  152 (249)
T PF07993_consen   81 YQELAEEVDVIIHCAASVNFN---APYSELRAVNVDGTRNLLRLAAQGKRKRFHYIST-AYVAGSRP----GTIEEKVYP  152 (249)
T ss_dssp             HHHHHHH--EEEE--SS-SBS----S--EEHHHHHHHHHHHHHHHTSSS---EEEEEE-GGGTTS-T----TT--SSS-H
T ss_pred             hhccccccceeeecchhhhhc---ccchhhhhhHHHHHHHHHHHHHhccCcceEEecc-ccccCCCC----Ccccccccc
Confidence            777788999999999987653   3556789999999999999999776679999999 43444322    112111   


Q ss_pred             -CCCchhhhccccchHHHHHHHHHHHHHHHHHhCCccEEEEccCeeecCCCCCC---CCccHH-HHHHHHcCCCCCCCCC
Q 025755          148 -CWSDEEFCKATENYYCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPT---INTSSL-LLLGFLKGFFFTTPSH  222 (248)
Q Consensus       148 -~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~---~~~~~~-~~~~~~~~~~l~~~~~  222 (248)
                       .....+......+.|..||+.+|.++.++.++.|++++++|||.|.|......   ...... +......+.+...+..
T Consensus       153 ~~~~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~~g~p~~I~Rp~~i~g~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~  232 (249)
T PF07993_consen  153 EEEDDLDPPQGFPNGYEQSKWVAERLLREAAQRHGLPVTIYRPGIIVGDSRTGWWNSDDFFPYLLRSCIALGAFPDLPGD  232 (249)
T ss_dssp             HH--EEE--TTSEE-HHHHHHHHHHHHHHHHHHH---EEEEEE-EEE-SSSSS---TTBHHHHHHHHHHHH-EEES-SB-
T ss_pred             cccccchhhccCCccHHHHHHHHHHHHHHHHhcCCceEEEEecCcccccCCCceeeccchHHHHHHHHHHcCCcccccCC
Confidence             11222233344578999999999999999988669999999999999433322   121233 3334444444444444


Q ss_pred             chhhhhhhhhccc
Q 025755          223 SYMLERTLVLNQG  235 (248)
Q Consensus       223 ~~~~g~~l~vd~g  235 (248)
                      ....-+++.||-.
T Consensus       233 ~~~~~d~vPVD~v  245 (249)
T PF07993_consen  233 PDARLDLVPVDYV  245 (249)
T ss_dssp             --TT--EEEHHHH
T ss_pred             CCceEeEECHHHH
Confidence            3333455666643

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.93  E-value=6.1e-25  Score=177.91  Aligned_cols=176  Identities=18%  Similarity=0.147  Sum_probs=134.9

Q ss_pred             CCCCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC----
Q 025755            1 MSGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA----   76 (248)
Q Consensus         1 m~~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~----   76 (248)
                      |+.+++++++||||+|+||++++++|+++|++|++++|+... .......+.....++.++.+|++|.+++.++++    
T Consensus         2 ~~~~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   80 (239)
T PRK07666          2 AQSLQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEEN-LKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKN   80 (239)
T ss_pred             CccCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            345778999999999999999999999999999999998642 222222333334578899999999999888876    


Q ss_pred             ---CCCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHHh----cCCCEEEEEeccceeccCCCCCCCCccC
Q 025755           77 ---GCTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCVK----AKVKRVVVVSSIGAVMLNPNWPKGQVMD  145 (248)
Q Consensus        77 ---~id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~~----~~~~~iV~vSS~~~~~~~~~~~~~~~~~  145 (248)
                         .+|+|||+||.......    .+.+.+.+++|+.++.++++++.+    .+.+++|++||..++++.+....     
T Consensus        81 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~-----  155 (239)
T PRK07666         81 ELGSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQKGAAVTSA-----  155 (239)
T ss_pred             HcCCccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhccCCCCCcc-----
Confidence               68999999997654321    233467789999999988888764    45689999999877766543323     


Q ss_pred             CCCCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCC
Q 025755          146 EECWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQ  198 (248)
Q Consensus       146 e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~  198 (248)
                                      |+.+|.+.+.+++.++.+   .++++++++||.+.+++..
T Consensus       156 ----------------Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~  195 (239)
T PRK07666        156 ----------------YSASKFGVLGLTESLMQEVRKHNIRVTALTPSTVATDMAV  195 (239)
T ss_pred             ----------------hHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccCcchh
Confidence                            999998766666655532   4699999999999998643

>PRK12828 short chain dehydrogenase; Provisional

Probab=99.93  E-value=7.7e-25  Score=176.94  Aligned_cols=210  Identities=17%  Similarity=0.184  Sum_probs=148.5

Q ss_pred             CCCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-----
Q 025755            2 SGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-----   76 (248)
Q Consensus         2 ~~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-----   76 (248)
                      +.+++|+++||||+|+||+++++.|+++|++|++++|+..+. ....+.+..  ....++.+|+.|.++++++++     
T Consensus         3 ~~~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (239)
T PRK12828          3 HSLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPL-SQTLPGVPA--DALRIGGIDLVDPQAARRAVDEVNRQ   79 (239)
T ss_pred             CCCCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhH-HHHHHHHhh--cCceEEEeecCCHHHHHHHHHHHHHH
Confidence            347889999999999999999999999999999999976422 222222222  346778899999998888775     


Q ss_pred             --CCCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHHh----cCCCEEEEEeccceeccCCCCCCCCccCC
Q 025755           77 --GCTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCVK----AKVKRVVVVSSIGAVMLNPNWPKGQVMDE  146 (248)
Q Consensus        77 --~id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~~----~~~~~iV~vSS~~~~~~~~~~~~~~~~~e  146 (248)
                        ++|+|||++|.......    .+.+.+.+++|+.++.++++++.+    .+.+++|++||..++.+.+..        
T Consensus        80 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~--------  151 (239)
T PRK12828         80 FGRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALKAGPGM--------  151 (239)
T ss_pred             hCCcCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhccCCCCc--------
Confidence              58999999997543211    223356688999999998888753    467899999997765544322        


Q ss_pred             CCCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCCC-------ccHHHHHHHHcCCC
Q 025755          147 ECWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTIN-------TSSLLLLGFLKGFF  216 (248)
Q Consensus       147 ~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~~-------~~~~~~~~~~~~~~  216 (248)
                                   ..|+.+|...+.+++.++.+   .++++++++||+++++.......       .....+..+..  +
T Consensus       152 -------------~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~~~~~~~~~~~~~~~~~~dva~~~~--~  216 (239)
T PRK12828        152 -------------GAYAAAKAGVARLTEALAAELLDRGITVNAVLPSIIDTPPNRADMPDADFSRWVTPEQIAAVIA--F  216 (239)
T ss_pred             -------------chhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcchhhcCCchhhhcCCCHHHHHHHHH--H
Confidence                         23999998777776666543   46999999999999985432211       00111112211  3


Q ss_pred             CCCCCCchhhhhhhhhcccee
Q 025755          217 FTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       217 l~~~~~~~~~g~~l~vd~g~~  237 (248)
                      +......+++|+.+.+|||..
T Consensus       217 ~l~~~~~~~~g~~~~~~g~~~  237 (239)
T PRK12828        217 LLSDEAQAITGASIPVDGGVA  237 (239)
T ss_pred             HhCcccccccceEEEecCCEe
Confidence            444445678999999999863

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=99.93  E-value=1.7e-25  Score=177.21  Aligned_cols=224  Identities=19%  Similarity=0.233  Sum_probs=177.3

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHC--CCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC--CCCE
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLK--GYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA--GCTG   80 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~--~id~   80 (248)
                      +-++++||||.||||++.+..+...  .++.+.++.-.--.....++. ....++..++++|+.+...+..++.  ++|.
T Consensus         5 ~~~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~~~l~~-~~n~p~ykfv~~di~~~~~~~~~~~~~~id~   83 (331)
T KOG0747|consen    5 KEKNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNLKNLEP-VRNSPNYKFVEGDIADADLVLYLFETEEIDT   83 (331)
T ss_pred             ccceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccccchhhh-hccCCCceEeeccccchHHHHhhhccCchhh
Confidence            3489999999999999999999876  355555543211111111111 1235789999999999999888886  6999


Q ss_pred             EEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhc-CCCEEEEEeccceeccCCCCCCCCccC-CCCCCchhhhccc
Q 025755           81 VFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKA-KVKRVVVVSSIGAVMLNPNWPKGQVMD-EECWSDEEFCKAT  158 (248)
Q Consensus        81 vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~-~~~~iV~vSS~~~~~~~~~~~~~~~~~-e~~~~~~~~~~~~  158 (248)
                      |+|.|+......+-.+..++.+.|+.++..++++++.. +++++|++||. .+||..+.   .... |.+.+      +|
T Consensus        84 vihfaa~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~sg~i~~fvhvSTd-eVYGds~~---~~~~~E~s~~------nP  153 (331)
T KOG0747|consen   84 VIHFAAQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVSGNIRRFVHVSTD-EVYGDSDE---DAVVGEASLL------NP  153 (331)
T ss_pred             hhhhHhhhhhhhhcCchHHHhcCCchhhhhHHHHHHhccCeeEEEEeccc-ceecCccc---cccccccccC------CC
Confidence            99999988776666666888999999999999999998 78999999995 47776542   2222 44444      45


Q ss_pred             cchHHHHHHHHHHHHHHHHHhCCccEEEEccCeeecCCCCCCCCccHHHHHHHHcCCCCCCCCCchhhhhhhhhccceeE
Q 025755          159 ENYYCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKGFFFTTPSHSYMLERTLVLNQGVRL  238 (248)
Q Consensus       159 ~~~Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~l~vd~g~~~  238 (248)
                      .++|++||+++|...+.|..++|++++++|.++||||.+.+. ..++.|+.....+....+.+++..+...+||+|-+.+
T Consensus       154 tnpyAasKaAaE~~v~Sy~~sy~lpvv~~R~nnVYGP~q~~~-klipkFi~l~~~~~~~~i~g~g~~~rs~l~veD~~ea  232 (331)
T KOG0747|consen  154 TNPYAASKAAAEMLVRSYGRSYGLPVVTTRMNNVYGPNQYPE-KLIPKFIKLAMRGKEYPIHGDGLQTRSYLYVEDVSEA  232 (331)
T ss_pred             CCchHHHHHHHHHHHHHHhhccCCcEEEEeccCccCCCcChH-HHhHHHHHHHHhCCCcceecCcccceeeEeHHHHHHH
Confidence            677999999999999999999999999999999999998765 5677888888888888899999999999999987665


Q ss_pred             EE
Q 025755          239 YR  240 (248)
Q Consensus       239 ~~  240 (248)
                      +.
T Consensus       233 ~~  234 (331)
T KOG0747|consen  233 FK  234 (331)
T ss_pred             HH
Confidence            54

>PRK06197 short chain dehydrogenase; Provisional

Probab=99.93  E-value=2.2e-24  Score=181.04  Aligned_cols=189  Identities=20%  Similarity=0.149  Sum_probs=131.5

Q ss_pred             CCCCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcC--CCCCeEEEEccCCCHHHHHHHhC--
Q 025755            1 MSGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEG--ASENLQLFKTDLLDYEALCAATA--   76 (248)
Q Consensus         1 m~~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~Di~d~~~~~~~~~--   76 (248)
                      |+++++|+++||||+||||+++++.|+++|++|++++|+..... ...+.+..  ...++.++.+|++|.++++++++  
T Consensus        11 ~~~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~-~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~   89 (306)
T PRK06197         11 IPDQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGK-AAAARITAATPGADVTLQELDLTSLASVRAAADAL   89 (306)
T ss_pred             cccCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHH
Confidence            45678999999999999999999999999999999999864322 22222221  13468899999999999888765  


Q ss_pred             -----CCCEEEEccccCCCCC--CCCccccchhhhHHHH----HHHHHHHHhcCCCEEEEEeccceec-cCCCCCCCCcc
Q 025755           77 -----GCTGVFHVACPVPVGK--VPNPEVQLIDPAVVGT----KNVLNSCVKAKVKRVVVVSSIGAVM-LNPNWPKGQVM  144 (248)
Q Consensus        77 -----~id~vi~~ag~~~~~~--~~~~~~~~~~~n~~g~----~~~~~~~~~~~~~~iV~vSS~~~~~-~~~~~~~~~~~  144 (248)
                           ++|+||||||......  ..+.+...+++|+.++    ..+++.+++.+.++||++||..+.. +..      +.
T Consensus        90 ~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~------~~  163 (306)
T PRK06197         90 RAAYPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGGHRIRAAI------HF  163 (306)
T ss_pred             HhhCCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCHHHhccCCC------Cc
Confidence                 4899999999754331  2345567899999995    4555555555668999999976432 211      11


Q ss_pred             CCCCCCchhhhccccchHHHHHHHHHHHHHHHHHhC---CccEEEE--ccCeeecCCCCC
Q 025755          145 DEECWSDEEFCKATENYYCLAKTIAEIQALEYAKRG---ELDIVTV--CPSIVIGPMLQP  199 (248)
Q Consensus       145 ~e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~---~i~v~~v--rpg~i~g~~~~~  199 (248)
                      ++...   +....+...|+.||++.+.+.+.++.+.   +++++++  +||.+.+++...
T Consensus       164 ~~~~~---~~~~~~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~~~~  220 (306)
T PRK06197        164 DDLQW---ERRYNRVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTELARN  220 (306)
T ss_pred             cccCc---ccCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCccccc
Confidence            11110   0112234569999987777777666543   5666655  799999997653

>PRK12829 short chain dehydrogenase; Provisional

Probab=99.93  E-value=4.6e-25  Score=181.08  Aligned_cols=171  Identities=19%  Similarity=0.141  Sum_probs=130.3

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC------
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA------   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~------   76 (248)
                      .+++|+++||||+|+||+++++.|+++|++|++++|+... .....+....  .++.++.+|++|++++..+++      
T Consensus         8 ~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~-~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (264)
T PRK12829          8 PLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAA-LAATAARLPG--AKVTATVADVADPAQVERVFDTAVERF   84 (264)
T ss_pred             ccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHHHhc--CceEEEEccCCCHHHHHHHHHHHHHHh
Confidence            4678999999999999999999999999999999997642 2222222211  267889999999998887764      


Q ss_pred             -CCCEEEEccccCCCC-C----CCCccccchhhhHHHHHHHHHHHHh----cCC-CEEEEEeccceeccCCCCCCCCccC
Q 025755           77 -GCTGVFHVACPVPVG-K----VPNPEVQLIDPAVVGTKNVLNSCVK----AKV-KRVVVVSSIGAVMLNPNWPKGQVMD  145 (248)
Q Consensus        77 -~id~vi~~ag~~~~~-~----~~~~~~~~~~~n~~g~~~~~~~~~~----~~~-~~iV~vSS~~~~~~~~~~~~~~~~~  145 (248)
                       ++|+|||+||..... .    ..+.+...+++|+.++.++++++.+    .+. ++++++||..+..+.+.+..     
T Consensus        85 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~~~~~~~~-----  159 (264)
T PRK12829         85 GGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRLGYPGRTP-----  159 (264)
T ss_pred             CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecccccccCCCCCch-----
Confidence             589999999976322 1    1234567899999999998888743    344 67888888666555443222     


Q ss_pred             CCCCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCC
Q 025755          146 EECWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPML  197 (248)
Q Consensus       146 e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~  197 (248)
                                      |+.+|...+.++..++.+   .+++++++|||+++||+.
T Consensus       160 ----------------y~~~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~  198 (264)
T PRK12829        160 ----------------YAASKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRM  198 (264)
T ss_pred             ----------------hHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHH
Confidence                            999999888887777654   369999999999999864

>PRK05993 short chain dehydrogenase; Provisional

Probab=99.93  E-value=8.3e-25  Score=181.09  Aligned_cols=166  Identities=22%  Similarity=0.236  Sum_probs=126.2

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC--------
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA--------   76 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~--------   76 (248)
                      ++|+++||||+||||+++++.|+++|++|++++|+.+..  ..+.   .  ..+.++.+|++|.++++.+++        
T Consensus         3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~--~~l~---~--~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g   75 (277)
T PRK05993          3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDV--AALE---A--EGLEAFQLDYAEPESIAALVAQVLELSGG   75 (277)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHH--HHHH---H--CCceEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            468999999999999999999999999999999986422  1111   1  257889999999988877664        


Q ss_pred             CCCEEEEccccCCCCCCC----CccccchhhhHHH----HHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCC
Q 025755           77 GCTGVFHVACPVPVGKVP----NPEVQLIDPAVVG----TKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEEC  148 (248)
Q Consensus        77 ~id~vi~~ag~~~~~~~~----~~~~~~~~~n~~g----~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~  148 (248)
                      .+|+||||||........    +.+...+++|+.|    +.++++.+++.+.++||++||..++.+.+..          
T Consensus        76 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~----------  145 (277)
T PRK05993         76 RLDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILGLVPMKYR----------  145 (277)
T ss_pred             CccEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhhcCCCCcc----------
Confidence            479999999976544222    2345688999999    4566666777777899999997765544332          


Q ss_pred             CCchhhhccccchHHHHHHHHHHHHHHHHH---hCCccEEEEccCeeecCCCC
Q 025755          149 WSDEEFCKATENYYCLAKTIAEIQALEYAK---RGELDIVTVCPSIVIGPMLQ  198 (248)
Q Consensus       149 ~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~---~~~i~v~~vrpg~i~g~~~~  198 (248)
                                 ..|+.||++.+.+.+.++.   +.|+++++|+||.+.+++..
T Consensus       146 -----------~~Y~asK~a~~~~~~~l~~el~~~gi~v~~v~Pg~v~T~~~~  187 (277)
T PRK05993        146 -----------GAYNASKFAIEGLSLTLRMELQGSGIHVSLIEPGPIETRFRA  187 (277)
T ss_pred             -----------chHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCCccCchhh
Confidence                       2399999877776665542   24699999999999998643

>PRK08303 short chain dehydrogenase; Provisional

Probab=99.93  E-value=8.1e-25  Score=183.29  Aligned_cols=177  Identities=17%  Similarity=0.033  Sum_probs=126.0

Q ss_pred             CCCCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCc---------hhhHHhhhhcCCCCCeEEEEccCCCHHHH
Q 025755            1 MSGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCD---------EKNAHLKKLEGASENLQLFKTDLLDYEAL   71 (248)
Q Consensus         1 m~~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~---------~~~~~~~~~~~~~~~~~~~~~Di~d~~~~   71 (248)
                      |..+++|+++||||++|||+++++.|+++|++|++++|+...         ......+.+.....++.++++|++|.+++
T Consensus         3 ~~~l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v   82 (305)
T PRK08303          3 MKPLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQV   82 (305)
T ss_pred             CcCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHH
Confidence            446789999999999999999999999999999999997421         11222223333345678899999999998


Q ss_pred             HHHhC-------CCCEEEEcc-ccCCC----CC----CCCccccchhhhHHHHHHHHHHHHhc----CCCEEEEEeccce
Q 025755           72 CAATA-------GCTGVFHVA-CPVPV----GK----VPNPEVQLIDPAVVGTKNVLNSCVKA----KVKRVVVVSSIGA  131 (248)
Q Consensus        72 ~~~~~-------~id~vi~~a-g~~~~----~~----~~~~~~~~~~~n~~g~~~~~~~~~~~----~~~~iV~vSS~~~  131 (248)
                      +++++       ++|++|||| |....    ..    ..+.+.+.+++|+.++..+++++.+.    +.++||++||..+
T Consensus        83 ~~~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g~IV~isS~~~  162 (305)
T PRK08303         83 RALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGGLVVEITDGTA  162 (305)
T ss_pred             HHHHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCcEEEEECCccc
Confidence            88764       589999999 74211    11    12345567899999988877777543    4579999999654


Q ss_pred             eccCCCCCCCCccCCCCCCchhhhccccchHHHHHH----HHHHHHHHHHHhCCccEEEEccCeeecCC
Q 025755          132 VMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAKT----IAEIQALEYAKRGELDIVTVCPSIVIGPM  196 (248)
Q Consensus       132 ~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~----~~e~l~~~~~~~~~i~v~~vrpg~i~g~~  196 (248)
                      ........                  ....|+.||+    +++.++.++++. |||||+|+||++.+++
T Consensus       163 ~~~~~~~~------------------~~~~Y~asKaal~~lt~~La~el~~~-gIrVn~v~PG~v~T~~  212 (305)
T PRK08303        163 EYNATHYR------------------LSVFYDLAKTSVNRLAFSLAHELAPH-GATAVALTPGWLRSEM  212 (305)
T ss_pred             cccCcCCC------------------CcchhHHHHHHHHHHHHHHHHHhhhc-CcEEEEecCCccccHH
Confidence            32111000                  0123999996    555556666554 5999999999999986

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.93  E-value=5.4e-25  Score=179.39  Aligned_cols=207  Identities=16%  Similarity=0.179  Sum_probs=145.2

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC------
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA------   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~------   76 (248)
                      ++++++++|||++|+||+++++.|+++|++|++++|+... .....+.+.....++.++++|++|.++++++++      
T Consensus         2 ~~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (253)
T PRK08217          2 DLKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEK-LEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDF   80 (253)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            3789999999999999999999999999999999988632 222233333334578899999999988776655      


Q ss_pred             -CCCEEEEccccCCCCC-------------CCCccccchhhhHHHHHHHHHHHHh----c-CCCEEEEEeccceeccCCC
Q 025755           77 -GCTGVFHVACPVPVGK-------------VPNPEVQLIDPAVVGTKNVLNSCVK----A-KVKRVVVVSSIGAVMLNPN  137 (248)
Q Consensus        77 -~id~vi~~ag~~~~~~-------------~~~~~~~~~~~n~~g~~~~~~~~~~----~-~~~~iV~vSS~~~~~~~~~  137 (248)
                       .+|+||||||......             ..+.+..++++|+.++.++++.+.+    . ..++||++||.. .++.+.
T Consensus        81 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~-~~~~~~  159 (253)
T PRK08217         81 GQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIA-RAGNMG  159 (253)
T ss_pred             CCCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEcccc-ccCCCC
Confidence             4799999999643211             1123355788999999877765543    2 346899999864 444433


Q ss_pred             CCCCCccCCCCCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCCCccHHHHHHHHcC
Q 025755          138 WPKGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKG  214 (248)
Q Consensus       138 ~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~~  214 (248)
                      ..                     .|+.+|++.+.+++.++.+   .++++++++||.+.+++.....   +.........
T Consensus       160 ~~---------------------~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~~~~---~~~~~~~~~~  215 (253)
T PRK08217        160 QT---------------------NYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTAAMK---PEALERLEKM  215 (253)
T ss_pred             Cc---------------------hhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccC---HHHHHHHHhc
Confidence            22                     3999998777777766643   4699999999999998754321   1222111111


Q ss_pred             C----------------CCCCCCCchhhhhhhhhcccee
Q 025755          215 F----------------FFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       215 ~----------------~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                      .                ++.  ...+++|+++.+|||+.
T Consensus       216 ~~~~~~~~~~~~a~~~~~l~--~~~~~~g~~~~~~gg~~  252 (253)
T PRK08217        216 IPVGRLGEPEEIAHTVRFII--ENDYVTGRVLEIDGGLR  252 (253)
T ss_pred             CCcCCCcCHHHHHHHHHHHH--cCCCcCCcEEEeCCCcc
Confidence            1                232  35688999999999975

>PRK06482 short chain dehydrogenase; Provisional

Probab=99.93  E-value=8.3e-25  Score=180.91  Aligned_cols=166  Identities=22%  Similarity=0.198  Sum_probs=128.1

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-------CC
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-------GC   78 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-------~i   78 (248)
                      .|++|||||+||||++++++|+++|++|+++.|+.+.. ....+.   ...++.++++|++|.+++.++++       ++
T Consensus         2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~-~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   77 (276)
T PRK06482          2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDAL-DDLKAR---YGDRLWVLQLDVTDSAAVRAVVDRAFAALGRI   77 (276)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHh---ccCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            47899999999999999999999999999999875321 111111   13468899999999998887764       47


Q ss_pred             CEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHH----HhcCCCEEEEEeccceeccCCCCCCCCccCCCCCC
Q 025755           79 TGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSC----VKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWS  150 (248)
Q Consensus        79 d~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~----~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~  150 (248)
                      |+||||||.......    .+.+...+++|+.++.++++++    ++.+.++||++||..+..+.+..            
T Consensus        78 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~------------  145 (276)
T PRK06482         78 DVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQIAYPGF------------  145 (276)
T ss_pred             CEEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCcccccCCCCC------------
Confidence            999999997654322    2234568899999999999997    44467899999997655443322            


Q ss_pred             chhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCC
Q 025755          151 DEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPM  196 (248)
Q Consensus       151 ~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~  196 (248)
                               +.|+.||++.+.+++.++.+   ++++++++|||.+.+++
T Consensus       146 ---------~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~v~pg~~~t~~  185 (276)
T PRK06482        146 ---------SLYHATKWGIEGFVEAVAQEVAPFGIEFTIVEPGPARTNF  185 (276)
T ss_pred             ---------chhHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCccccCC
Confidence                     33999999988888887765   47999999999985554

>PRK06101 short chain dehydrogenase; Provisional

Probab=99.93  E-value=9.4e-25  Score=177.07  Aligned_cols=167  Identities=22%  Similarity=0.181  Sum_probs=129.4

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCC----CCEE
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAG----CTGV   81 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~----id~v   81 (248)
                      |++++||||+||||+++++.|+++|++|++++|+.+..     +++.....++.++.+|++|.+++++++++    +|.+
T Consensus         1 ~~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~~   75 (240)
T PRK06101          1 MTAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVL-----DELHTQSANIFTLAFDVTDHPGTKAALSQLPFIPELW   75 (240)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHH-----HHHHHhcCCCeEEEeeCCCHHHHHHHHHhcccCCCEE
Confidence            47999999999999999999999999999999975321     11222234688899999999999998875    5899


Q ss_pred             EEccccCCCCC----CCCccccchhhhHHHHHHHHHHHHhc--CCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhh
Q 025755           82 FHVACPVPVGK----VPNPEVQLIDPAVVGTKNVLNSCVKA--KVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFC  155 (248)
Q Consensus        82 i~~ag~~~~~~----~~~~~~~~~~~n~~g~~~~~~~~~~~--~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~  155 (248)
                      |||||......    ..+.+..++++|+.++.++++++.+.  +.+++|++||..+.++.+....               
T Consensus        76 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~---------------  140 (240)
T PRK06101         76 IFNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIASELALPRAEA---------------  140 (240)
T ss_pred             EEcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechhhccCCCCCch---------------
Confidence            99998643221    12234578999999999999999874  3468999999776665544333               


Q ss_pred             ccccchHHHHHHHHHHHHHHHHH---hCCccEEEEccCeeecCCCC
Q 025755          156 KATENYYCLAKTIAEIQALEYAK---RGELDIVTVCPSIVIGPMLQ  198 (248)
Q Consensus       156 ~~~~~~Y~~sK~~~e~l~~~~~~---~~~i~v~~vrpg~i~g~~~~  198 (248)
                            |+.+|+..+.+.+.++.   +.++++++++||.+++|+..
T Consensus       141 ------Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~pg~i~t~~~~  180 (240)
T PRK06101        141 ------YGASKAAVAYFARTLQLDLRPKGIEVVTVFPGFVATPLTD  180 (240)
T ss_pred             ------hhHHHHHHHHHHHHHHHHHHhcCceEEEEeCCcCCCCCcC
Confidence                  99999877777666653   34699999999999998754

>PRK05872 short chain dehydrogenase; Provisional

Probab=99.93  E-value=8.7e-25  Score=182.62  Aligned_cols=173  Identities=22%  Similarity=0.222  Sum_probs=131.4

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC------
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA------   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~------   76 (248)
                      ++++|+++||||+||||+++++.|+++|++|++++|+..+ .....+.+. ...++..+.+|++|.++++++++      
T Consensus         6 ~l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-l~~~~~~l~-~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   83 (296)
T PRK05872          6 SLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAE-LAALAAELG-GDDRVLTVVADVTDLAAMQAAAEEAVERF   83 (296)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHHhc-CCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            4678999999999999999999999999999999998642 222222232 23456777899999998887764      


Q ss_pred             -CCCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHHhc---CCCEEEEEeccceeccCCCCCCCCccCCCC
Q 025755           77 -GCTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCVKA---KVKRVVVVSSIGAVMLNPNWPKGQVMDEEC  148 (248)
Q Consensus        77 -~id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~~~---~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~  148 (248)
                       .+|+||||||.......    .+.+..++++|+.++.++++++.+.   +.++||++||..++.+.+....        
T Consensus        84 g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~--------  155 (296)
T PRK05872         84 GGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQVSSLAAFAAAPGMAA--------  155 (296)
T ss_pred             CCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHhhcCCCCCchH--------
Confidence             58999999998654322    2344678999999999999888653   3479999999877665544333        


Q ss_pred             CCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCC
Q 025755          149 WSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQ  198 (248)
Q Consensus       149 ~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~  198 (248)
                                   |+.||+..+.+.+.++.+   .++++++++||++.+++..
T Consensus       156 -------------Y~asKaal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~  195 (296)
T PRK05872        156 -------------YCASKAGVEAFANALRLEVAHHGVTVGSAYLSWIDTDLVR  195 (296)
T ss_pred             -------------HHHHHHHHHHHHHHHHHHHHHHCcEEEEEecCcccchhhh
Confidence                         999997666665555432   3699999999999998754

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.93  E-value=7.9e-25  Score=182.19  Aligned_cols=216  Identities=11%  Similarity=0.050  Sum_probs=139.6

Q ss_pred             CCCCcEEEEEcCc--cHHHHHHHHHHHHCCCeEEEEEcCC---------CchhhHH--------------hhhhcCCCCC
Q 025755            3 GEDKERVCVTGAG--GYIASWLVKYLLLKGYMVHGTVRDP---------CDEKNAH--------------LKKLEGASEN   57 (248)
Q Consensus         3 ~l~~k~vlVtG~~--g~iG~~~~~~l~~~g~~V~~~~r~~---------~~~~~~~--------------~~~~~~~~~~   57 (248)
                      ++++|+++|||++  +|||+++++.|+++|++|++.++..         .......              ...+...-..
T Consensus         5 ~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~   84 (299)
T PRK06300          5 DLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVPIYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDASFDT   84 (299)
T ss_pred             CCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccchhhhhhhhcccccccccccccccchhhhhhHHHhhhhcCC
Confidence            5789999999996  9999999999999999999976431         1000000              0000001112


Q ss_pred             eEEEEccCCC--------HHHHHHHh-------CCCCEEEEccccCCC--C----CCCCccccchhhhHHHHHHHHHHHH
Q 025755           58 LQLFKTDLLD--------YEALCAAT-------AGCTGVFHVACPVPV--G----KVPNPEVQLIDPAVVGTKNVLNSCV  116 (248)
Q Consensus        58 ~~~~~~Di~d--------~~~~~~~~-------~~id~vi~~ag~~~~--~----~~~~~~~~~~~~n~~g~~~~~~~~~  116 (248)
                      .+-+.+||++        .+++++++       .++|++|||||....  .    ...+.|+..+++|+.++.++++++.
T Consensus        85 ~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~a~~  164 (299)
T PRK06300         85 PEDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSHFG  164 (299)
T ss_pred             CEEeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence            2333344433        12344443       358999999986431  1    1134567889999999999998887


Q ss_pred             hc--CCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccccchHHHHHH----HHHHHHHHHHHhCCccEEEEccC
Q 025755          117 KA--KVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAKT----IAEIQALEYAKRGELDIVTVCPS  190 (248)
Q Consensus       117 ~~--~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~----~~e~l~~~~~~~~~i~v~~vrpg  190 (248)
                      +.  ..++||++||..+..+.+...                    .+|+.||+    +++.++.++++++|||||+|+||
T Consensus       165 p~m~~~G~ii~iss~~~~~~~p~~~--------------------~~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~PG  224 (299)
T PRK06300        165 PIMNPGGSTISLTYLASMRAVPGYG--------------------GGMSSAKAALESDTKVLAWEAGRRWGIRVNTISAG  224 (299)
T ss_pred             HHhhcCCeEEEEeehhhcCcCCCcc--------------------HHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeC
Confidence            75  346899999977665554321                    13999996    45555666655447999999999


Q ss_pred             eeecCCCCCCCCccHHHHHH----HHcC------------CCCCCCCCchhhhhhhhhccceeEE
Q 025755          191 IVIGPMLQPTINTSSLLLLG----FLKG------------FFFTTPSHSYMLERTLVLNQGVRLY  239 (248)
Q Consensus       191 ~i~g~~~~~~~~~~~~~~~~----~~~~------------~~l~~~~~~~~~g~~l~vd~g~~~~  239 (248)
                      .+.+++..... ........    ...+            .|+.++...|++|+++.+|||+...
T Consensus       225 ~v~T~~~~~~~-~~~~~~~~~~~~~p~~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG~~~~  288 (299)
T PRK06300        225 PLASRAGKAIG-FIERMVDYYQDWAPLPEPMEAEQVGAAAAFLVSPLASAITGETLYVDHGANVM  288 (299)
T ss_pred             CccChhhhccc-ccHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCCCCEEEECCCccee
Confidence            99998743210 00111110    0011            1677888899999999999997753

>PRK06196 oxidoreductase; Provisional

Probab=99.93  E-value=3.2e-24  Score=180.72  Aligned_cols=181  Identities=18%  Similarity=0.083  Sum_probs=129.6

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-------
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-------   76 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-------   76 (248)
                      +++|+++||||+||||++++++|+++|++|++++|+.... ......+    .++.++.+|++|.++++++++       
T Consensus        24 l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~-~~~~~~l----~~v~~~~~Dl~d~~~v~~~~~~~~~~~~   98 (315)
T PRK06196         24 LSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVA-REALAGI----DGVEVVMLDLADLESVRAFAERFLDSGR   98 (315)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHHh----hhCeEEEccCCCHHHHHHHHHHHHhcCC
Confidence            5789999999999999999999999999999999986422 2222222    237889999999999888764       


Q ss_pred             CCCEEEEccccCCCC--CCCCccccchhhhHHHHHHHHHHHH----hcCCCEEEEEeccceeccCCCCCCCCccCCCCCC
Q 025755           77 GCTGVFHVACPVPVG--KVPNPEVQLIDPAVVGTKNVLNSCV----KAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWS  150 (248)
Q Consensus        77 ~id~vi~~ag~~~~~--~~~~~~~~~~~~n~~g~~~~~~~~~----~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~  150 (248)
                      ++|+||||||.....  ...+.++..+++|+.++..+++.+.    +.+.++||++||.....+...        .+.+.
T Consensus        99 ~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~--------~~~~~  170 (315)
T PRK06196         99 RIDILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGHRRSPIR--------WDDPH  170 (315)
T ss_pred             CCCEEEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHhccCCCC--------ccccC
Confidence            589999999975432  1234456789999999766666554    445579999999654322111        11000


Q ss_pred             chhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCC
Q 025755          151 DEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQ  198 (248)
Q Consensus       151 ~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~  198 (248)
                      . .....+...|+.||.+.+.+++.++.+   .|+++++|+||.+.||+..
T Consensus       171 ~-~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~~  220 (315)
T PRK06196        171 F-TRGYDKWLAYGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQR  220 (315)
T ss_pred             c-cCCCChHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCccc
Confidence            0 011122355999998877777776553   3699999999999999754

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=99.93  E-value=1.5e-26  Score=187.76  Aligned_cols=202  Identities=20%  Similarity=0.193  Sum_probs=145.6

Q ss_pred             cCc--cHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHh--------CCCCEEE
Q 025755           13 GAG--GYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAAT--------AGCTGVF   82 (248)
Q Consensus        13 G~~--g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~--------~~id~vi   82 (248)
                      |++  +|||++++++|+++|++|++++|+..+. ...++.+....+ ..++.+|++|++++++++        .++|++|
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~-~~~~~~l~~~~~-~~~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV   78 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKL-ADALEELAKEYG-AEVIQCDLSDEESVEALFDEAVERFGGRIDILV   78 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHH-HHHHHHHHHHTT-SEEEESCTTSHHHHHHHHHHHHHHHCSSESEEE
T ss_pred             CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHH-HHHHHHHHHHcC-CceEeecCcchHHHHHHHHHHHhhcCCCeEEEE
Confidence            566  9999999999999999999999998542 222333322212 336999999999888874        4689999


Q ss_pred             EccccCCC----CCC----CCccccchhhhHHHHHHHHHHHHhc--CCCEEEEEeccceeccCCCCCCCCccCCCCCCch
Q 025755           83 HVACPVPV----GKV----PNPEVQLIDPAVVGTKNVLNSCVKA--KVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDE  152 (248)
Q Consensus        83 ~~ag~~~~----~~~----~~~~~~~~~~n~~g~~~~~~~~~~~--~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~  152 (248)
                      ||++....    ...    .+.|...+++|+.+...+++++.+.  ..++||++||..+..+.+..              
T Consensus        79 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss~~~~~~~~~~--------------  144 (241)
T PF13561_consen   79 NNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISSIAAQRPMPGY--------------  144 (241)
T ss_dssp             EEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEEGGGTSBSTTT--------------
T ss_pred             ecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccchhhcccCccc--------------
Confidence            99998765    111    2345678899999999888888664  34799999998765554432              


Q ss_pred             hhhccccchHHHHHH----HHHHHHHHHHHhCCccEEEEccCeeecCCCCCCC---CccHHHHHHHHcCC----------
Q 025755          153 EFCKATENYYCLAKT----IAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTI---NTSSLLLLGFLKGF----------  215 (248)
Q Consensus       153 ~~~~~~~~~Y~~sK~----~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~---~~~~~~~~~~~~~~----------  215 (248)
                             ..|+.+|+    +++.++.+++++.|||||+|+||.+.+++.....   ...........-++          
T Consensus       145 -------~~y~~sKaal~~l~r~lA~el~~~~gIrVN~V~pG~i~t~~~~~~~~~~~~~~~~~~~~pl~r~~~~~evA~~  217 (241)
T PF13561_consen  145 -------SAYSASKAALEGLTRSLAKELAPKKGIRVNAVSPGPIETPMTERIPGNEEFLEELKKRIPLGRLGTPEEVANA  217 (241)
T ss_dssp             -------HHHHHHHHHHHHHHHHHHHHHGGHGTEEEEEEEESSBSSHHHHHHHTHHHHHHHHHHHSTTSSHBEHHHHHHH
T ss_pred             -------hhhHHHHHHHHHHHHHHHHHhccccCeeeeeecccceeccchhccccccchhhhhhhhhccCCCcCHHHHHHH
Confidence                   23999995    7777788888723599999999999988633210   01111112222222          


Q ss_pred             --CCCCCCCchhhhhhhhhcccee
Q 025755          216 --FFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       216 --~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                        ||.++...|+||++|.||||++
T Consensus       218 v~fL~s~~a~~itG~~i~vDGG~s  241 (241)
T PF13561_consen  218 VLFLASDAASYITGQVIPVDGGFS  241 (241)
T ss_dssp             HHHHHSGGGTTGTSEEEEESTTGG
T ss_pred             HHHHhCccccCccCCeEEECCCcC
Confidence              8889989999999999999974

...

>PRK05866 short chain dehydrogenase; Provisional

Probab=99.93  E-value=2.9e-24  Score=179.19  Aligned_cols=173  Identities=16%  Similarity=0.138  Sum_probs=129.8

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-------
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-------   76 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-------   76 (248)
                      +++|+++||||+||||+++++.|+++|++|++++|+.+. .....+.+.....++.++.+|++|.+++.++++       
T Consensus        38 ~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~-l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g  116 (293)
T PRK05866         38 LTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDL-LDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIG  116 (293)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHH-HHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            677999999999999999999999999999999998642 222233333334568899999999999888876       


Q ss_pred             CCCEEEEccccCCCCCCC------CccccchhhhHHHHHHHHHHHH----hcCCCEEEEEeccceecc-CCCCCCCCccC
Q 025755           77 GCTGVFHVACPVPVGKVP------NPEVQLIDPAVVGTKNVLNSCV----KAKVKRVVVVSSIGAVML-NPNWPKGQVMD  145 (248)
Q Consensus        77 ~id~vi~~ag~~~~~~~~------~~~~~~~~~n~~g~~~~~~~~~----~~~~~~iV~vSS~~~~~~-~~~~~~~~~~~  145 (248)
                      .+|+||||||........      +.+...+++|+.++.++++++.    +.+.++||++||.+.+.. .+..       
T Consensus       117 ~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~p~~-------  189 (293)
T PRK05866        117 GVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVLSEASPLF-------  189 (293)
T ss_pred             CCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCCCCc-------
Confidence            689999999976443221      2234678999999888777664    456689999999654321 2221       


Q ss_pred             CCCCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCC
Q 025755          146 EECWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQ  198 (248)
Q Consensus       146 e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~  198 (248)
                                    ..|+.||++.+.+.+.++.+   .++++++++||.+.+++..
T Consensus       190 --------------~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~~~~  231 (293)
T PRK05866        190 --------------SVYNASKAALSAVSRVIETEWGDRGVHSTTLYYPLVATPMIA  231 (293)
T ss_pred             --------------chHHHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCcccc
Confidence                          23999998776666665543   3699999999999998754

>PRK08263 short chain dehydrogenase; Provisional

Probab=99.93  E-value=1.2e-24  Score=180.02  Aligned_cols=168  Identities=20%  Similarity=0.126  Sum_probs=129.6

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-------C
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-------G   77 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-------~   77 (248)
                      ++|+++||||+|+||++++++|+++|++|++++|+.++. ....+.   ....+.++++|++|.+++..+++       .
T Consensus         2 ~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~-~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   77 (275)
T PRK08263          2 MEKVWFITGASRGFGRAWTEAALERGDRVVATARDTATL-ADLAEK---YGDRLLPLALDVTDRAAVFAAVETAVEHFGR   77 (275)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHH-HHHHHh---ccCCeeEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            468999999999999999999999999999999986422 111111   13468889999999998877765       5


Q ss_pred             CCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHH----HhcCCCEEEEEeccceeccCCCCCCCCccCCCCC
Q 025755           78 CTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSC----VKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECW  149 (248)
Q Consensus        78 id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~----~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~  149 (248)
                      +|+||||||.......    .+.+..++++|+.++.++++.+    ++.+.++||++||..++.+.+...          
T Consensus        78 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~----------  147 (275)
T PRK08263         78 LDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGISAFPMSG----------  147 (275)
T ss_pred             CCEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcCCCCCcc----------
Confidence            7999999998654322    2345678999999987777776    455678999999987766654432          


Q ss_pred             CchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCC
Q 025755          150 SDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPML  197 (248)
Q Consensus       150 ~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~  197 (248)
                                 .|+.+|++.+.++..++.+   .|+++++++||.+.+++.
T Consensus       148 -----------~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~Pg~~~t~~~  187 (275)
T PRK08263        148 -----------IYHASKWALEGMSEALAQEVAEFGIKVTLVEPGGYSTDWA  187 (275)
T ss_pred             -----------HHHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCccCCcc
Confidence                       3999998777666666543   479999999999999875

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=99.93  E-value=4.7e-24  Score=174.10  Aligned_cols=169  Identities=17%  Similarity=0.133  Sum_probs=127.2

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHh-------CCC
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAAT-------AGC   78 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~-------~~i   78 (248)
                      +|++|||||+|+||+++++.|+++|++|++++|+... .......+.....++.++++|+.|.++++.++       ..+
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   79 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAG-AEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGL   79 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            4799999999999999999999999999999998632 22222222223457889999999999666554       358


Q ss_pred             CEEEEccccCCCCCCC----CccccchhhhHHHHHHHHHHH----HhcCCCEEEEEeccceeccCCCCCCCCccCCCCCC
Q 025755           79 TGVFHVACPVPVGKVP----NPEVQLIDPAVVGTKNVLNSC----VKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWS  150 (248)
Q Consensus        79 d~vi~~ag~~~~~~~~----~~~~~~~~~n~~g~~~~~~~~----~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~  150 (248)
                      |+|||+||........    +.+..+++.|+.++..+++.+    ++.+.+++|++||...+.+.+....          
T Consensus        80 d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~~~~~~----------  149 (255)
T TIGR01963        80 DILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGLVASPFKSA----------  149 (255)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcCCCCCCch----------
Confidence            9999999976543221    223567789999988887776    4456789999999766655443322          


Q ss_pred             chhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCC
Q 025755          151 DEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPM  196 (248)
Q Consensus       151 ~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~  196 (248)
                                 |+.+|...+.+++.++.+   .+++++++|||.+++|.
T Consensus       150 -----------y~~sk~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~~~~  187 (255)
T TIGR01963       150 -----------YVAAKHGLIGLTKVLALEVAAHGITVNAICPGYVRTPL  187 (255)
T ss_pred             -----------hHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHH
Confidence                       999998777777766553   36999999999999985

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK07454 short chain dehydrogenase; Provisional

Probab=99.93  E-value=1.5e-24  Score=175.78  Aligned_cols=176  Identities=19%  Similarity=0.171  Sum_probs=132.9

Q ss_pred             CCCCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC----
Q 025755            1 MSGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA----   76 (248)
Q Consensus         1 m~~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~----   76 (248)
                      |+.-+||+++||||+|+||++++++|+++|++|++++|+..+ .....+.+.....++.++.+|++|.+++.++++    
T Consensus         1 ~~~~~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   79 (241)
T PRK07454          1 MSLNSMPRALITGASSGIGKATALAFAKAGWDLALVARSQDA-LEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLE   79 (241)
T ss_pred             CCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            555578999999999999999999999999999999998642 222233333334578899999999998887765    


Q ss_pred             ---CCCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHH----hcCCCEEEEEeccceeccCCCCCCCCccC
Q 025755           77 ---GCTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCV----KAKVKRVVVVSSIGAVMLNPNWPKGQVMD  145 (248)
Q Consensus        77 ---~id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~----~~~~~~iV~vSS~~~~~~~~~~~~~~~~~  145 (248)
                         ++|+||||||.......    .+.+...+++|+.++.++++.+.    +.+.++||++||...+.+.+.+       
T Consensus        80 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~-------  152 (241)
T PRK07454         80 QFGCPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAARNAFPQW-------  152 (241)
T ss_pred             HcCCCCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCcCCCCc-------
Confidence               48999999997653321    23446678999999888777764    3456899999997765544332       


Q ss_pred             CCCCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCC
Q 025755          146 EECWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQ  198 (248)
Q Consensus       146 e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~  198 (248)
                                    ..|+.+|.+.+.+.+.++.+   .++++++|+||.+.+|+..
T Consensus       153 --------------~~Y~~sK~~~~~~~~~~a~e~~~~gi~v~~i~pg~i~t~~~~  194 (241)
T PRK07454        153 --------------GAYCVSKAALAAFTKCLAEEERSHGIRVCTITLGAVNTPLWD  194 (241)
T ss_pred             --------------cHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCcccCCccc
Confidence                          23999998777776665532   3699999999999998643

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.93  E-value=6.2e-26  Score=167.56  Aligned_cols=209  Identities=21%  Similarity=0.175  Sum_probs=158.5

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCC---CC
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAG---CT   79 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~---id   79 (248)
                      +|.|+.|++||+.-|||++++..|.+.|++|+.+.|+..+.. ...++.   ..-+..+.+|+.+.+.+++++..   +|
T Consensus         4 ~laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~-sLV~e~---p~~I~Pi~~Dls~wea~~~~l~~v~pid   79 (245)
T KOG1207|consen    4 SLAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLL-SLVKET---PSLIIPIVGDLSAWEALFKLLVPVFPID   79 (245)
T ss_pred             cccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHH-HHHhhC---CcceeeeEecccHHHHHHHhhcccCchh
Confidence            368999999999999999999999999999999999875332 222222   33488899999999988888764   69


Q ss_pred             EEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHH----Hhc-CCCEEEEEeccceeccCCCCCCCCccCCCCCC
Q 025755           80 GVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSC----VKA-KVKRVVVVSSIGAVMLNPNWPKGQVMDEECWS  150 (248)
Q Consensus        80 ~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~----~~~-~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~  150 (248)
                      .++||||+......    ...++..|++|+.+..++.+..    .+. ..+.||++||.++..+..++..          
T Consensus        80 gLVNNAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas~R~~~nHtv----------  149 (245)
T KOG1207|consen   80 GLVNNAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQASIRPLDNHTV----------  149 (245)
T ss_pred             hhhccchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhcccccCCceE----------
Confidence            99999998654321    3455778999999987777663    333 3468999999887776644333          


Q ss_pred             chhhhccccchHHHHHH----HHHHHHHHHHHhCCccEEEEccCeeecCCCCCCC---CccHHHHHHHHcCC--------
Q 025755          151 DEEFCKATENYYCLAKT----IAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTI---NTSSLLLLGFLKGF--------  215 (248)
Q Consensus       151 ~~~~~~~~~~~Y~~sK~----~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~---~~~~~~~~~~~~~~--------  215 (248)
                                 |+.+|+    +++.++.+++++. ||||.|-|..+.+.|.+.+.   .....++.++.-++        
T Consensus       150 -----------YcatKaALDmlTk~lAlELGp~k-IRVNsVNPTVVmT~MG~dnWSDP~K~k~mL~riPl~rFaEV~eVV  217 (245)
T KOG1207|consen  150 -----------YCATKAALDMLTKCLALELGPQK-IRVNSVNPTVVMTDMGRDNWSDPDKKKKMLDRIPLKRFAEVDEVV  217 (245)
T ss_pred             -----------EeecHHHHHHHHHHHHHhhCcce-eEeeccCCeEEEecccccccCCchhccchhhhCchhhhhHHHHHH
Confidence                       999996    6777777777765 99999999999999876541   11122333322222        


Q ss_pred             ----CCCCCCCchhhhhhhhhcccee
Q 025755          216 ----FFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       216 ----~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                          |+.++.+++.||..+.++||.+
T Consensus       218 nA~lfLLSd~ssmttGstlpveGGfs  243 (245)
T KOG1207|consen  218 NAVLFLLSDNSSMTTGSTLPVEGGFS  243 (245)
T ss_pred             hhheeeeecCcCcccCceeeecCCcc
Confidence                8889999999999999999976

>PRK07775 short chain dehydrogenase; Provisional

Probab=99.93  E-value=4.5e-24  Score=176.46  Aligned_cols=173  Identities=17%  Similarity=0.119  Sum_probs=132.5

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC------
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA------   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~------   76 (248)
                      .+++|+++||||+|+||++++++|+++|++|++++|+... .......+.....++.++.+|++|.+++.++++      
T Consensus         7 ~~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   85 (274)
T PRK07775          7 HPDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEK-CEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEAL   85 (274)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhc
Confidence            4567899999999999999999999999999999987532 222222233334568889999999999888775      


Q ss_pred             -CCCEEEEccccCCCCCCC----CccccchhhhHHHHHHHHHHHHh----cCCCEEEEEeccceeccCCCCCCCCccCCC
Q 025755           77 -GCTGVFHVACPVPVGKVP----NPEVQLIDPAVVGTKNVLNSCVK----AKVKRVVVVSSIGAVMLNPNWPKGQVMDEE  147 (248)
Q Consensus        77 -~id~vi~~ag~~~~~~~~----~~~~~~~~~n~~g~~~~~~~~~~----~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~  147 (248)
                       ++|+||||||........    +.+...+++|+.++.++++.+.+    .+.++||++||..++.+.+...        
T Consensus        86 ~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~--------  157 (274)
T PRK07775         86 GEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALRQRPHMG--------  157 (274)
T ss_pred             CCCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcCCCCCcc--------
Confidence             579999999976543221    23456679999999998888753    3557899999977655443322        


Q ss_pred             CCCchhhhccccchHHHHHHHHHHHHHHHHHhC---CccEEEEccCeeecCCC
Q 025755          148 CWSDEEFCKATENYYCLAKTIAEIQALEYAKRG---ELDIVTVCPSIVIGPML  197 (248)
Q Consensus       148 ~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~---~i~v~~vrpg~i~g~~~  197 (248)
                                   .|+.+|++.+.+++.++.+.   |++++++|||.+.++..
T Consensus       158 -------------~Y~~sK~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~  197 (274)
T PRK07775        158 -------------AYGAAKAGLEAMVTNLQMELEGTGVRASIVHPGPTLTGMG  197 (274)
T ss_pred             -------------hHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCCcccCccc
Confidence                         29999999999998887653   79999999999987753

>PRK06179 short chain dehydrogenase; Provisional

Probab=99.93  E-value=2.3e-24  Score=177.74  Aligned_cols=164  Identities=20%  Similarity=0.204  Sum_probs=128.8

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-------C
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-------G   77 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-------~   77 (248)
                      ++++++||||+|+||++++++|+++|++|++.+|+..+..         ...++.++++|++|.++++++++       .
T Consensus         3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~---------~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~   73 (270)
T PRK06179          3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAA---------PIPGVELLELDVTDDASVQAAVDEVIARAGR   73 (270)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhcc---------ccCCCeeEEeecCCHHHHHHHHHHHHHhCCC
Confidence            5689999999999999999999999999999999863211         12467899999999999988876       4


Q ss_pred             CCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHH----HhcCCCEEEEEeccceeccCCCCCCCCccCCCCC
Q 025755           78 CTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSC----VKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECW  149 (248)
Q Consensus        78 id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~----~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~  149 (248)
                      +|+||||||.......    .+.+...+++|+.++.++++++    ++.+.++||++||..++.+.+...          
T Consensus        74 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~----------  143 (270)
T PRK06179         74 IDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGFLPAPYMA----------  143 (270)
T ss_pred             CCEEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCccccCCCCCcc----------
Confidence            7999999998654322    2334678999999988888875    445778999999987665544322          


Q ss_pred             CchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCC
Q 025755          150 SDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQ  198 (248)
Q Consensus       150 ~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~  198 (248)
                                 .|+.+|...+.+.+.++.+   .|+++++++||++.+++..
T Consensus       144 -----------~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~~~t~~~~  184 (270)
T PRK06179        144 -----------LYAASKHAVEGYSESLDHEVRQFGIRVSLVEPAYTKTNFDA  184 (270)
T ss_pred             -----------HHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeCCCccccccc
Confidence                       3999998777666665433   4699999999999998654

>PRK07109 short chain dehydrogenase; Provisional

Probab=99.93  E-value=2e-24  Score=183.14  Aligned_cols=173  Identities=18%  Similarity=0.130  Sum_probs=128.9

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC------
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA------   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~------   76 (248)
                      .+++|+++||||+||||+++++.|+++|++|++++|+... .....+.+.....++.++.+|++|.++++++++      
T Consensus         5 ~l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~-l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~   83 (334)
T PRK07109          5 PIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEG-LEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEEL   83 (334)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHH-HHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHC
Confidence            4678999999999999999999999999999999997642 223333343345678899999999999888764      


Q ss_pred             -CCCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHH----HHhcCCCEEEEEeccceeccCCCCCCCCccCCC
Q 025755           77 -GCTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNS----CVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEE  147 (248)
Q Consensus        77 -~id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~----~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~  147 (248)
                       .+|++|||||.......    .+.+...+++|+.++.++.+.    +++.+.++||++||..++.+.+...        
T Consensus        84 g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~~~~~~~~~--------  155 (334)
T PRK07109         84 GPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYRSIPLQS--------  155 (334)
T ss_pred             CCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhhccCCCcch--------
Confidence             58999999997543321    233456789998887665444    4555668999999987765544322        


Q ss_pred             CCCchhhhccccchHHHHHHHHHH----HHHHHHHh-CCccEEEEccCeeecCCC
Q 025755          148 CWSDEEFCKATENYYCLAKTIAEI----QALEYAKR-GELDIVTVCPSIVIGPML  197 (248)
Q Consensus       148 ~~~~~~~~~~~~~~Y~~sK~~~e~----l~~~~~~~-~~i~v~~vrpg~i~g~~~  197 (248)
                                   .|+.||...+.    +..++..+ .++++++|+||.+.+|+.
T Consensus       156 -------------~Y~asK~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~  197 (334)
T PRK07109        156 -------------AYCAAKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQF  197 (334)
T ss_pred             -------------HHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCchh
Confidence                         39999975544    44555443 369999999999999853

>PRK06914 short chain dehydrogenase; Provisional

Probab=99.92  E-value=2.1e-24  Score=178.82  Aligned_cols=172  Identities=20%  Similarity=0.188  Sum_probs=129.7

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhc--CCCCCeEEEEccCCCHHHHHHHhC-----
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLE--GASENLQLFKTDLLDYEALCAATA-----   76 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~~Di~d~~~~~~~~~-----   76 (248)
                      |++|+++||||+|+||+++++.|+++|++|++++|+.+... ...+...  ....++.++.+|++|.+++++ ++     
T Consensus         1 ~~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~   78 (280)
T PRK06914          1 MNKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQE-NLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKE   78 (280)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHH-HHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHh
Confidence            35689999999999999999999999999999999864322 2222221  113578999999999988776 43     


Q ss_pred             --CCCEEEEccccCCCCCCC----CccccchhhhHHHHHHHHHHH----HhcCCCEEEEEeccceeccCCCCCCCCccCC
Q 025755           77 --GCTGVFHVACPVPVGKVP----NPEVQLIDPAVVGTKNVLNSC----VKAKVKRVVVVSSIGAVMLNPNWPKGQVMDE  146 (248)
Q Consensus        77 --~id~vi~~ag~~~~~~~~----~~~~~~~~~n~~g~~~~~~~~----~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e  146 (248)
                        ++|+||||||........    +.+...+++|+.++.++++++    ++.+.++||++||..+.++.+...       
T Consensus        79 ~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~-------  151 (280)
T PRK06914         79 IGRIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISGRVGFPGLS-------  151 (280)
T ss_pred             cCCeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccccCCCCCCc-------
Confidence              579999999976543222    234567889999988888775    455678999999977666654333       


Q ss_pred             CCCCchhhhccccchHHHHHHHHHHHHHHHHH---hCCccEEEEccCeeecCCCC
Q 025755          147 ECWSDEEFCKATENYYCLAKTIAEIQALEYAK---RGELDIVTVCPSIVIGPMLQ  198 (248)
Q Consensus       147 ~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~---~~~i~v~~vrpg~i~g~~~~  198 (248)
                                    .|+.+|...+.+++.++.   +.++++++++||.++++...
T Consensus       152 --------------~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~  192 (280)
T PRK06914        152 --------------PYVSSKYALEGFSESLRLELKPFGIDVALIEPGSYNTNIWE  192 (280)
T ss_pred             --------------hhHHhHHHHHHHHHHHHHHhhhhCCEEEEEecCCcccchhh
Confidence                          399999887777777652   34699999999999998643

>PRK07904 short chain dehydrogenase; Provisional

Probab=99.92  E-value=4.9e-24  Score=174.20  Aligned_cols=172  Identities=11%  Similarity=0.065  Sum_probs=124.0

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCC-CeEEEEEcCCCchhhHHhhhhcCC-CCCeEEEEccCCCHHHHHHHhC------
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKG-YMVHGTVRDPCDEKNAHLKKLEGA-SENLQLFKTDLLDYEALCAATA------   76 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Di~d~~~~~~~~~------   76 (248)
                      .+|+++||||+||||++++++|+++| ++|++++|+.+.......+++... ..++.++.+|+.|.++++++++      
T Consensus         7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~g   86 (253)
T PRK07904          7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFAGG   86 (253)
T ss_pred             CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHhcC
Confidence            46899999999999999999999995 999999998753223333333332 2378999999999888665553      


Q ss_pred             CCCEEEEccccCCCCC-CCCcc---ccchhhhHHHHHH----HHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCC
Q 025755           77 GCTGVFHVACPVPVGK-VPNPE---VQLIDPAVVGTKN----VLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEEC  148 (248)
Q Consensus        77 ~id~vi~~ag~~~~~~-~~~~~---~~~~~~n~~g~~~----~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~  148 (248)
                      ++|++|||+|...... ...+.   .+.+++|+.++..    +++.+++.+.++||++||..+..+.+...         
T Consensus        87 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~~g~~~~~~~~---------  157 (253)
T PRK07904         87 DVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSVAGERVRRSNF---------  157 (253)
T ss_pred             CCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCceEEEEechhhcCCCCCCc---------
Confidence            6999999999754321 11111   2468999999876    56666666778999999976544433222         


Q ss_pred             CCchhhhccccchHHHHHHHHH----HHHHHHHHhCCccEEEEccCeeecCCCC
Q 025755          149 WSDEEFCKATENYYCLAKTIAE----IQALEYAKRGELDIVTVCPSIVIGPMLQ  198 (248)
Q Consensus       149 ~~~~~~~~~~~~~Y~~sK~~~e----~l~~~~~~~~~i~v~~vrpg~i~g~~~~  198 (248)
                                  .|+.||++..    .+..++.. .++++++++||++.+++..
T Consensus       158 ------------~Y~~sKaa~~~~~~~l~~el~~-~~i~v~~v~Pg~v~t~~~~  198 (253)
T PRK07904        158 ------------VYGSTKAGLDGFYLGLGEALRE-YGVRVLVVRPGQVRTRMSA  198 (253)
T ss_pred             ------------chHHHHHHHHHHHHHHHHHHhh-cCCEEEEEeeCceecchhc
Confidence                        2999997555    44444444 4699999999999998544

>PRK08862 short chain dehydrogenase; Provisional

Probab=99.92  E-value=4.2e-24  Score=171.81  Aligned_cols=199  Identities=12%  Similarity=0.034  Sum_probs=134.0

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC------
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA------   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~------   76 (248)
                      ++++|+++||||+++||++++++|+++|++|++++|+... .....+.+.....++..+.+|++|.++++++++      
T Consensus         2 ~~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~-l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (227)
T PRK08862          2 DIKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSA-LKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQF   80 (227)
T ss_pred             CCCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHH-HHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHh
Confidence            4789999999999999999999999999999999997643 223333333334567888999999998887653      


Q ss_pred             --CCCEEEEccccCCCC-CC----CCccccchhhhHHHHHHHHHHH----HhcC-CCEEEEEeccceeccCCCCCCCCcc
Q 025755           77 --GCTGVFHVACPVPVG-KV----PNPEVQLIDPAVVGTKNVLNSC----VKAK-VKRVVVVSSIGAVMLNPNWPKGQVM  144 (248)
Q Consensus        77 --~id~vi~~ag~~~~~-~~----~~~~~~~~~~n~~g~~~~~~~~----~~~~-~~~iV~vSS~~~~~~~~~~~~~~~~  144 (248)
                        .+|++|||||..... ..    .+.+.+.+++|+.++..+++.+    .+.+ .++||++||..+.   +.+..    
T Consensus        81 g~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~---~~~~~----  153 (227)
T PRK08862         81 NRAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDDH---QDLTG----  153 (227)
T ss_pred             CCCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCCC---CCcch----
Confidence              589999999854322 11    1233456778888876665544    3333 5799999985432   22223    


Q ss_pred             CCCCCCchhhhccccchHHHHHHH----HHHHHHHHHHhCCccEEEEccCeeecCCCCCCCCccHHHHHHHHcCC--CCC
Q 025755          145 DEECWSDEEFCKATENYYCLAKTI----AEIQALEYAKRGELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKGF--FFT  218 (248)
Q Consensus       145 ~e~~~~~~~~~~~~~~~Y~~sK~~----~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~~~--~l~  218 (248)
                                       |+.||+.    ++.++.++.+. ++||++|+||++.++..... .... .+..-....  +|.
T Consensus       154 -----------------Y~asKaal~~~~~~la~el~~~-~Irvn~v~PG~i~t~~~~~~-~~~~-~~~~~~~~~~~~l~  213 (227)
T PRK08862        154 -----------------VESSNALVSGFTHSWAKELTPF-NIRVGGVVPSIFSANGELDA-VHWA-EIQDELIRNTEYIV  213 (227)
T ss_pred             -----------------hHHHHHHHHHHHHHHHHHHhhc-CcEEEEEecCcCcCCCccCH-HHHH-HHHHHHHhheeEEE
Confidence                             9999974    55555555544 59999999999999843211 1011 111111122  444


Q ss_pred             CCCCchhhhhhhh
Q 025755          219 TPSHSYMLERTLV  231 (248)
Q Consensus       219 ~~~~~~~~g~~l~  231 (248)
                        .+.|+||..+.
T Consensus       214 --~~~~~tg~~~~  224 (227)
T PRK08862        214 --ANEYFSGRVVE  224 (227)
T ss_pred             --ecccccceEEe
Confidence              37799987653

>PRK08264 short chain dehydrogenase; Validated

Probab=99.92  E-value=3.4e-24  Score=173.41  Aligned_cols=168  Identities=20%  Similarity=0.135  Sum_probs=132.8

Q ss_pred             CCCCCCcEEEEEcCccHHHHHHHHHHHHCCC-eEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC---
Q 025755            1 MSGEDKERVCVTGAGGYIASWLVKYLLLKGY-MVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA---   76 (248)
Q Consensus         1 m~~l~~k~vlVtG~~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~---   76 (248)
                      |+++++++++||||+|+||+++++.|+++|+ +|++++|+..+...        ...++.++.+|+.|.+++.++++   
T Consensus         1 ~~~~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~--------~~~~~~~~~~D~~~~~~~~~~~~~~~   72 (238)
T PRK08264          1 MMDIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD--------LGPRVVPLQLDVTDPASVAAAAEAAS   72 (238)
T ss_pred             CCCCCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh--------cCCceEEEEecCCCHHHHHHHHHhcC
Confidence            6668899999999999999999999999999 99999998642211        23578899999999999988876   


Q ss_pred             CCCEEEEcccc-CCCCC----CCCccccchhhhHHHHHHHHHHHHh----cCCCEEEEEeccceeccCCCCCCCCccCCC
Q 025755           77 GCTGVFHVACP-VPVGK----VPNPEVQLIDPAVVGTKNVLNSCVK----AKVKRVVVVSSIGAVMLNPNWPKGQVMDEE  147 (248)
Q Consensus        77 ~id~vi~~ag~-~~~~~----~~~~~~~~~~~n~~g~~~~~~~~~~----~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~  147 (248)
                      .+|+|||+||. .....    ..+.+...+++|+.++.++++++.+    .+.+++|++||..++.+.+..         
T Consensus        73 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~~---------  143 (238)
T PRK08264         73 DVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWVNFPNL---------  143 (238)
T ss_pred             CCCEEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhccCCCCc---------
Confidence            48999999998 33221    1234466789999999999988764    456899999997766544332         


Q ss_pred             CCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCC
Q 025755          148 CWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPML  197 (248)
Q Consensus       148 ~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~  197 (248)
                                  ..|+.+|...+.+.+.++.+   .++++++++||.+.+++.
T Consensus       144 ------------~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~~~  184 (238)
T PRK08264        144 ------------GTYSASKAAAWSLTQALRAELAPQGTRVLGVHPGPIDTDMA  184 (238)
T ss_pred             ------------hHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeCCccccccc
Confidence                        23999998888777776654   269999999999998864

>PRK07825 short chain dehydrogenase; Provisional

Probab=99.92  E-value=4e-24  Score=176.59  Aligned_cols=168  Identities=20%  Similarity=0.157  Sum_probs=126.9

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC------
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA------   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~------   76 (248)
                      ++++|+++||||+|+||++++++|+++|++|++.+|+.+.. ....+.+    .++.++.+|++|.+++.++++      
T Consensus         2 ~~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~~~   76 (273)
T PRK07825          2 DLRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALA-KETAAEL----GLVVGGPLDVTDPASFAAFLDAVEADL   76 (273)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHH-HHHHHHh----ccceEEEccCCCHHHHHHHHHHHHHHc
Confidence            37889999999999999999999999999999999876422 1111221    257889999999998776654      


Q ss_pred             -CCCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHH----hcCCCEEEEEeccceeccCCCCCCCCccCCC
Q 025755           77 -GCTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCV----KAKVKRVVVVSSIGAVMLNPNWPKGQVMDEE  147 (248)
Q Consensus        77 -~id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~----~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~  147 (248)
                       .+|++|||||.......    .+.+...+++|+.++.++++.+.    +.+.++||++||..+..+.+....       
T Consensus        77 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~-------  149 (273)
T PRK07825         77 GPIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKIPVPGMAT-------  149 (273)
T ss_pred             CCCCEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccccCCCCCCcc-------
Confidence             57999999998654322    22346688999999887776664    456789999999877665544333       


Q ss_pred             CCCchhhhccccchHHHHHH----HHHHHHHHHHHhCCccEEEEccCeeecCCC
Q 025755          148 CWSDEEFCKATENYYCLAKT----IAEIQALEYAKRGELDIVTVCPSIVIGPML  197 (248)
Q Consensus       148 ~~~~~~~~~~~~~~Y~~sK~----~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~  197 (248)
                                    |+.||+    +.+.+..++.+. |+++++|+||.+.+++.
T Consensus       150 --------------Y~asKaa~~~~~~~l~~el~~~-gi~v~~v~Pg~v~t~~~  188 (273)
T PRK07825        150 --------------YCASKHAVVGFTDAARLELRGT-GVHVSVVLPSFVNTELI  188 (273)
T ss_pred             --------------hHHHHHHHHHHHHHHHHHhhcc-CcEEEEEeCCcCcchhh
Confidence                          999996    445555555443 69999999999988764

>PRK08267 short chain dehydrogenase; Provisional

Probab=99.92  E-value=2.6e-24  Score=176.40  Aligned_cols=169  Identities=21%  Similarity=0.154  Sum_probs=130.6

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC--------C
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA--------G   77 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~--------~   77 (248)
                      ||+++||||+|+||+++++.|+++|++|++++|+.+. .........  ..++.++++|++|.+++.++++        +
T Consensus         1 mk~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~-~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~   77 (260)
T PRK08267          1 MKSIFITGAASGIGRATALLFAAEGWRVGAYDINEAG-LAALAAELG--AGNAWTGALDVTDRAAWDAALADFAAATGGR   77 (260)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHH-HHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            4799999999999999999999999999999988642 222222221  3578999999999998887754        4


Q ss_pred             CCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHHh----cCCCEEEEEeccceeccCCCCCCCCccCCCCC
Q 025755           78 CTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCVK----AKVKRVVVVSSIGAVMLNPNWPKGQVMDEECW  149 (248)
Q Consensus        78 id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~~----~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~  149 (248)
                      +|+||||||.......    .+.+..++++|+.++.++++++.+    .+.++||++||..+.++.+....         
T Consensus        78 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~---------  148 (260)
T PRK08267         78 LDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAIYGQPGLAV---------  148 (260)
T ss_pred             CCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCCCCchh---------
Confidence            6999999998654322    233467899999999999888753    35689999999877776654333         


Q ss_pred             CchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCC
Q 025755          150 SDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQ  198 (248)
Q Consensus       150 ~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~  198 (248)
                                  |+.||+..+.+.+.++.+   .++++++++||.+.+++..
T Consensus       149 ------------Y~~sKaa~~~~~~~l~~~~~~~~i~v~~i~pg~~~t~~~~  188 (260)
T PRK08267        149 ------------YSATKFAVRGLTEALDLEWRRHGIRVADVMPLFVDTAMLD  188 (260)
T ss_pred             ------------hHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCcCCcccc
Confidence                        999998777776666543   3699999999999988654

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.92  E-value=2.5e-24  Score=174.11  Aligned_cols=211  Identities=14%  Similarity=0.142  Sum_probs=147.0

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC------
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA------   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~------   76 (248)
                      ++++|+++||||+|+||+++++.|+++|++|++++|+.... ....+.... ..++.++++|++|.++++++++      
T Consensus         2 ~~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~-~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   79 (238)
T PRK05786          2 RLKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKL-KRMKKTLSK-YGNIHYVVGDVSSTESARNVIEKAAKVL   79 (238)
T ss_pred             CcCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHHHHh-cCCeEEEECCCCCHHHHHHHHHHHHHHh
Confidence            47899999999999999999999999999999999986422 222122222 2468889999999998877664      


Q ss_pred             -CCCEEEEccccCCCCCC--CCccccchhhhHHHHHHHHHHHHhc--CCCEEEEEeccceecc-CCCCCCCCccCCCCCC
Q 025755           77 -GCTGVFHVACPVPVGKV--PNPEVQLIDPAVVGTKNVLNSCVKA--KVKRVVVVSSIGAVML-NPNWPKGQVMDEECWS  150 (248)
Q Consensus        77 -~id~vi~~ag~~~~~~~--~~~~~~~~~~n~~g~~~~~~~~~~~--~~~~iV~vSS~~~~~~-~~~~~~~~~~~e~~~~  150 (248)
                       ++|.+||++|.......  .+.+...+++|+.++.++++.+.+.  ..+++|++||..+..+ .+.             
T Consensus        80 ~~id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~-------------  146 (238)
T PRK05786         80 NAIDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMSGIYKASPD-------------  146 (238)
T ss_pred             CCCCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecchhcccCCCC-------------
Confidence             46999999986543211  1234567899999998888888764  3468999999654321 111             


Q ss_pred             chhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCC----------CccHHHHHHHHcCCCC
Q 025755          151 DEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTI----------NTSSLLLLGFLKGFFF  217 (248)
Q Consensus       151 ~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~----------~~~~~~~~~~~~~~~l  217 (248)
                              ...|+.+|.+.+.+++.++.+   .++++++++||++++++.....          ...+..+.....  ++
T Consensus       147 --------~~~Y~~sK~~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~--~~  216 (238)
T PRK05786        147 --------QLSYAVAKAGLAKAVEILASELLGRGIRVNGIAPTTISGDFEPERNWKKLRKLGDDMAPPEDFAKVII--WL  216 (238)
T ss_pred             --------chHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCCCCchhhhhhhccccCCCCCHHHHHHHHH--HH
Confidence                    223999998777766666654   3799999999999998642210          011122222221  34


Q ss_pred             CCCCCchhhhhhhhhccceeE
Q 025755          218 TTPSHSYMLERTLVLNQGVRL  238 (248)
Q Consensus       218 ~~~~~~~~~g~~l~vd~g~~~  238 (248)
                      ......+++|+.+.+|||..+
T Consensus       217 ~~~~~~~~~g~~~~~~~~~~~  237 (238)
T PRK05786        217 LTDEADWVDGVVIPVDGGARL  237 (238)
T ss_pred             hcccccCccCCEEEECCcccc
Confidence            445566889999999988753

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.92  E-value=6e-24  Score=170.87  Aligned_cols=173  Identities=16%  Similarity=0.199  Sum_probs=138.2

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC------
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA------   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~------   76 (248)
                      +.+|++||||||++|+|++++.+|+++|+++++.+.+.+ ...+..+..... ++++..+||++|.+++.+..+      
T Consensus        35 ~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~-~~~etv~~~~~~-g~~~~y~cdis~~eei~~~a~~Vk~e~  112 (300)
T KOG1201|consen   35 SVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQ-GNEETVKEIRKI-GEAKAYTCDISDREEIYRLAKKVKKEV  112 (300)
T ss_pred             hccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEecccc-chHHHHHHHHhc-CceeEEEecCCCHHHHHHHHHHHHHhc
Confidence            367999999999999999999999999999999999874 445555555443 489999999999999888765      


Q ss_pred             -CCCEEEEccccCCCCCCC----CccccchhhhHHHHHH----HHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCC
Q 025755           77 -GCTGVFHVACPVPVGKVP----NPEVQLIDPAVVGTKN----VLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEE  147 (248)
Q Consensus        77 -~id~vi~~ag~~~~~~~~----~~~~~~~~~n~~g~~~----~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~  147 (248)
                       .+|++|||||+.+.....    ++.+..+++|+.+...    +++.+.+.+-++||.++|.++..+.++-.+       
T Consensus       113 G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~~g~~gl~~-------  185 (300)
T KOG1201|consen  113 GDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGLFGPAGLAD-------  185 (300)
T ss_pred             CCceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhcccCCccchh-------
Confidence             479999999998766432    3336788999999655    455555557789999999998888776555       


Q ss_pred             CCCchhhhccccchHHHHHH----HHHHHHHHHHHhC--CccEEEEccCeeecCCCC
Q 025755          148 CWSDEEFCKATENYYCLAKT----IAEIQALEYAKRG--ELDIVTVCPSIVIGPMLQ  198 (248)
Q Consensus       148 ~~~~~~~~~~~~~~Y~~sK~----~~e~l~~~~~~~~--~i~v~~vrpg~i~g~~~~  198 (248)
                                    |++||.    +-|.+..|+..++  +++.+.|+|+.+-+++-.
T Consensus       186 --------------YcaSK~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~Tgmf~  228 (300)
T KOG1201|consen  186 --------------YCASKFAAVGFHESLSMELRALGKDGIKTTLVCPYFINTGMFD  228 (300)
T ss_pred             --------------hhhhHHHHHHHHHHHHHHHHhcCCCCeeEEEEeeeeccccccC
Confidence                          999995    6677777776544  699999999999987655

>PRK07102 short chain dehydrogenase; Provisional

Probab=99.92  E-value=4.5e-24  Score=173.29  Aligned_cols=171  Identities=16%  Similarity=0.082  Sum_probs=129.0

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcC-CCCCeEEEEccCCCHHHHHHHhC----CCCE
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEG-ASENLQLFKTDLLDYEALCAATA----GCTG   80 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Di~d~~~~~~~~~----~id~   80 (248)
                      ||+++||||+|+||+++++.|+++|++|++++|+.+.. ....+.+.. ...++.++++|++|.++++++++    ++|+
T Consensus         1 ~~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~d~   79 (243)
T PRK07102          1 MKKILIIGATSDIARACARRYAAAGARLYLAARDVERL-ERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPALPDI   79 (243)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHH-HHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhhcCCE
Confidence            57999999999999999999999999999999986432 222222222 23578999999999999888765    4699


Q ss_pred             EEEccccCCCCCCC----CccccchhhhHHHHHHHHHHHHh----cCCCEEEEEeccceeccCCCCCCCCccCCCCCCch
Q 025755           81 VFHVACPVPVGKVP----NPEVQLIDPAVVGTKNVLNSCVK----AKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDE  152 (248)
Q Consensus        81 vi~~ag~~~~~~~~----~~~~~~~~~n~~g~~~~~~~~~~----~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~  152 (248)
                      +||++|........    +++...+++|+.++.++++++.+    .+.++||++||..+..+.+....            
T Consensus        80 vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~------------  147 (243)
T PRK07102         80 VLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDRGRASNYV------------  147 (243)
T ss_pred             EEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccccCCCCCCcc------------
Confidence            99999975443221    22346789999999998888765    35689999999776555433222            


Q ss_pred             hhhccccchHHHHHHHHHHHHHHHHH---hCCccEEEEccCeeecCCCC
Q 025755          153 EFCKATENYYCLAKTIAEIQALEYAK---RGELDIVTVCPSIVIGPMLQ  198 (248)
Q Consensus       153 ~~~~~~~~~Y~~sK~~~e~l~~~~~~---~~~i~v~~vrpg~i~g~~~~  198 (248)
                               |+.+|...+.+.+.++.   +.++++++|+||.+++++..
T Consensus       148 ---------Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~v~t~~~~  187 (243)
T PRK07102        148 ---------YGSAKAALTAFLSGLRNRLFKSGVHVLTVKPGFVRTPMTA  187 (243)
T ss_pred             ---------cHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccChhhh
Confidence                     99999877666666643   33699999999999998543

>PRK06484 short chain dehydrogenase; Validated

Probab=99.92  E-value=4e-24  Score=191.73  Aligned_cols=212  Identities=18%  Similarity=0.163  Sum_probs=150.9

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-------
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-------   76 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-------   76 (248)
                      .++|+++||||++|||+++++.|+++|++|++++|+.+.. ....+.+   ..++.++++|++|+++++++++       
T Consensus         3 ~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~-~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   78 (520)
T PRK06484          3 AQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERA-RERADSL---GPDHHALAMDVSDEAQIREGFEQLHREFG   78 (520)
T ss_pred             CCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHHh---CCceeEEEeccCCHHHHHHHHHHHHHHhC
Confidence            6789999999999999999999999999999999976432 2222222   3467889999999999888765       


Q ss_pred             CCCEEEEccccCCCC------CCCCccccchhhhHHHHHHHHHHHHhc----CC-CEEEEEeccceeccCCCCCCCCccC
Q 025755           77 GCTGVFHVACPVPVG------KVPNPEVQLIDPAVVGTKNVLNSCVKA----KV-KRVVVVSSIGAVMLNPNWPKGQVMD  145 (248)
Q Consensus        77 ~id~vi~~ag~~~~~------~~~~~~~~~~~~n~~g~~~~~~~~~~~----~~-~~iV~vSS~~~~~~~~~~~~~~~~~  145 (248)
                      ++|+||||||.....      ...+++..++++|+.++..+++++.+.    +. ++||++||..+..+.+....     
T Consensus        79 ~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~~~~~~~-----  153 (520)
T PRK06484         79 RIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVALPKRTA-----  153 (520)
T ss_pred             CCCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCCCCCCch-----
Confidence            489999999974211      112445778999999999888887654    33 49999999887766554333     


Q ss_pred             CCCCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCCCc----cHHHHHHHHcC----
Q 025755          146 EECWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTINT----SSLLLLGFLKG----  214 (248)
Q Consensus       146 e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~~~----~~~~~~~~~~~----  214 (248)
                                      |+.+|+..+.+.+.++.+   .++++++|+||.+.+++.......    ..........+    
T Consensus       154 ----------------Y~asKaal~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (520)
T PRK06484        154 ----------------YSASKAAVISLTRSLACEWAAKGIRVNAVLPGYVRTQMVAELERAGKLDPSAVRSRIPLGRLGR  217 (520)
T ss_pred             ----------------HHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCcCchhhhhhcccchhhhHHHHhcCCCCCCcC
Confidence                            999997555555444433   259999999999999864321000    00000010011    


Q ss_pred             --------CCCCCCCCchhhhhhhhhccceeEEE
Q 025755          215 --------FFFTTPSHSYMLERTLVLNQGVRLYR  240 (248)
Q Consensus       215 --------~~l~~~~~~~~~g~~l~vd~g~~~~~  240 (248)
                              .++......+++|+++.+|+|...+.
T Consensus       218 ~~~va~~v~~l~~~~~~~~~G~~~~~~gg~~~~~  251 (520)
T PRK06484        218 PEEIAEAVFFLASDQASYITGSTLVVDGGWTVYG  251 (520)
T ss_pred             HHHHHHHHHHHhCccccCccCceEEecCCeeccc
Confidence                    15666667899999999999977553

>PRK07041 short chain dehydrogenase; Provisional

Probab=99.92  E-value=1.7e-24  Score=174.23  Aligned_cols=205  Identities=18%  Similarity=0.129  Sum_probs=146.8

Q ss_pred             EEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCC---CCEEEEccc
Q 025755           10 CVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAG---CTGVFHVAC   86 (248)
Q Consensus        10 lVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~---id~vi~~ag   86 (248)
                      +||||+|+||++++++|+++|++|++++|+..+ .......+. ...++.++.+|++|.+++.++++.   +|++||++|
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~-~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~id~li~~ag   78 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDR-LAAAARALG-GGAPVRTAALDITDEAAVDAFFAEAGPFDHVVITAA   78 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHHHh-cCCceEEEEccCCCHHHHHHHHHhcCCCCEEEECCC
Confidence            699999999999999999999999999997532 222222222 245688999999999999998864   799999999


Q ss_pred             cCCCCCC----CCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccccchH
Q 025755           87 PVPVGKV----PNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYY  162 (248)
Q Consensus        87 ~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y  162 (248)
                      .......    .+.+..++++|+.++.+++++....+.++||++||..++.+.+..                     ..|
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~g~iv~~ss~~~~~~~~~~---------------------~~Y  137 (230)
T PRK07041         79 DTPGGPVRALPLAAAQAAMDSKFWGAYRVARAARIAPGGSLTFVSGFAAVRPSASG---------------------VLQ  137 (230)
T ss_pred             CCCCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhhcCCeEEEEECchhhcCCCCcc---------------------hHH
Confidence            7554321    234567899999999999996655566899999998776554432                     339


Q ss_pred             HHHHHHHHHHHHHHHHhC-CccEEEEccCeeecCCCCCCC-CccHHHHHHHHc----CC----------CCCCCCCchhh
Q 025755          163 CLAKTIAEIQALEYAKRG-ELDIVTVCPSIVIGPMLQPTI-NTSSLLLLGFLK----GF----------FFTTPSHSYML  226 (248)
Q Consensus       163 ~~sK~~~e~l~~~~~~~~-~i~v~~vrpg~i~g~~~~~~~-~~~~~~~~~~~~----~~----------~l~~~~~~~~~  226 (248)
                      +.+|...+.+++.++.+. ++|+++++||.+.+|+..... ............    ++          ...+..+.+++
T Consensus       138 ~~sK~a~~~~~~~la~e~~~irv~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~  217 (230)
T PRK07041        138 GAINAALEALARGLALELAPVRVNTVSPGLVDTPLWSKLAGDAREAMFAAAAERLPARRVGQPEDVANAILFLAANGFTT  217 (230)
T ss_pred             HHHHHHHHHHHHHHHHHhhCceEEEEeecccccHHHHhhhccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhcCCCcC
Confidence            999998888888887653 599999999999887643211 011111111111    00          11112356889


Q ss_pred             hhhhhhcccee
Q 025755          227 ERTLVLNQGVR  237 (248)
Q Consensus       227 g~~l~vd~g~~  237 (248)
                      |+.+.+|||..
T Consensus       218 G~~~~v~gg~~  228 (230)
T PRK07041        218 GSTVLVDGGHA  228 (230)
T ss_pred             CcEEEeCCCee
Confidence            99999999965

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.92  E-value=6.4e-24  Score=173.66  Aligned_cols=170  Identities=21%  Similarity=0.175  Sum_probs=127.5

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-CCCEEEEc
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-GCTGVFHV   84 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-~id~vi~~   84 (248)
                      +|+++||||+|+||+++++.|+++|++|++++|+..+. ............++.++++|++|.+++.+++. ++|+||||
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~id~vi~~   80 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQV-TALRAEAARRGLALRVEKLDLTDAIDRAQAAEWDVDVLLNN   80 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHHHHhcCCcceEEEeeCCCHHHHHHHhcCCCCEEEEC
Confidence            57999999999999999999999999999999975322 12112222223468899999999999999887 89999999


Q ss_pred             cccCCCCCC----CCccccchhhhHHHHHHHHHHH----HhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhc
Q 025755           85 ACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSC----VKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCK  156 (248)
Q Consensus        85 ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~----~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~  156 (248)
                      ||.......    .+.++..+++|+.++.++.+.+    .+.+.++||++||..+..+.+..                  
T Consensus        81 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~------------------  142 (257)
T PRK09291         81 AGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSSMAGLITGPFT------------------  142 (257)
T ss_pred             CCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcChhhccCCCCc------------------
Confidence            997654322    2234567889999887666554    44566899999997665544322                  


Q ss_pred             cccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCC
Q 025755          157 ATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPML  197 (248)
Q Consensus       157 ~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~  197 (248)
                         ..|+.||...+.+++.++.+   .|+++++|+||.+.+++.
T Consensus       143 ---~~Y~~sK~a~~~~~~~l~~~~~~~gi~~~~v~pg~~~t~~~  183 (257)
T PRK09291        143 ---GAYCASKHALEAIAEAMHAELKPFGIQVATVNPGPYLTGFN  183 (257)
T ss_pred             ---chhHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccccch
Confidence               23999998888777666543   479999999999877653

>PRK06181 short chain dehydrogenase; Provisional

Probab=99.92  E-value=9.8e-24  Score=173.24  Aligned_cols=170  Identities=18%  Similarity=0.133  Sum_probs=131.0

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-------CC
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-------GC   78 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-------~i   78 (248)
                      +++++||||+|+||+++++.|+++|++|++++|+..+. ......+.....++.++.+|++|.+++..+++       ++
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~-~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   79 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRL-ASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGI   79 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            47899999999999999999999999999999986432 22233333334578899999999998888765       58


Q ss_pred             CEEEEccccCCCCCCCC-----ccccchhhhHHHHHHHHHHHHhc---CCCEEEEEeccceeccCCCCCCCCccCCCCCC
Q 025755           79 TGVFHVACPVPVGKVPN-----PEVQLIDPAVVGTKNVLNSCVKA---KVKRVVVVSSIGAVMLNPNWPKGQVMDEECWS  150 (248)
Q Consensus        79 d~vi~~ag~~~~~~~~~-----~~~~~~~~n~~g~~~~~~~~~~~---~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~  150 (248)
                      |+||||||........+     .+.+.+++|+.++.++++.+.+.   +.++||++||..++.+.+...           
T Consensus        80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~-----------  148 (263)
T PRK06181         80 DILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSSLAGLTGVPTRS-----------  148 (263)
T ss_pred             CEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEecccccCCCCCcc-----------
Confidence            99999999765432222     24567899999999999998642   457999999987666554322           


Q ss_pred             chhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCC
Q 025755          151 DEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPML  197 (248)
Q Consensus       151 ~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~  197 (248)
                                .|+.+|.+.+.+.+.++.+   .++++++++||.+.+++.
T Consensus       149 ----------~Y~~sK~~~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~  188 (263)
T PRK06181        149 ----------GYAASKHALHGFFDSLRIELADDGVAVTVVCPGFVATDIR  188 (263)
T ss_pred             ----------HHHHHHHHHHHHHHHHHHHhhhcCceEEEEecCccccCcc
Confidence                      3999998877777666542   369999999999998764

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=99.92  E-value=5.1e-24  Score=195.25  Aligned_cols=214  Identities=20%  Similarity=0.114  Sum_probs=149.4

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcC--CCCCeEEEEccCCCHHHHHHHhC-----
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEG--ASENLQLFKTDLLDYEALCAATA-----   76 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~Di~d~~~~~~~~~-----   76 (248)
                      +++|+++||||+||||++++++|+++|++|++++|+.... ....+.+..  ...++..+++|++|.++++++++     
T Consensus       412 l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~-~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~  490 (676)
T TIGR02632       412 LARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAA-EAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALA  490 (676)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHH-HHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHh
Confidence            6789999999999999999999999999999999986432 222222221  12357789999999999988876     


Q ss_pred             --CCCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHH----hcC-CCEEEEEeccceeccCCCCCCCCccC
Q 025755           77 --GCTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCV----KAK-VKRVVVVSSIGAVMLNPNWPKGQVMD  145 (248)
Q Consensus        77 --~id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~----~~~-~~~iV~vSS~~~~~~~~~~~~~~~~~  145 (248)
                        ++|+||||||.......    .+.|...+++|+.+...+.+.+.    +.+ .++||++||..++++.+...      
T Consensus       491 ~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~~~~~~~------  564 (676)
T TIGR02632       491 YGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYAGKNAS------  564 (676)
T ss_pred             cCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcCCCCCCH------
Confidence              58999999997543321    23346678999999877665544    333 36899999987776654332      


Q ss_pred             CCCCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecC-CC-CCCC--------CccHHHHHH-H
Q 025755          146 EECWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGP-ML-QPTI--------NTSSLLLLG-F  211 (248)
Q Consensus       146 e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~-~~-~~~~--------~~~~~~~~~-~  211 (248)
                                     .|+.||++.+.+++.++.+   .+++||+|+||.++.+ .. ....        ......+.. .
T Consensus       565 ---------------aY~aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~  629 (676)
T TIGR02632       565 ---------------AYSAAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVLQGSGIWDGEWREERAAAYGIPADELEEHY  629 (676)
T ss_pred             ---------------HHHHHHHHHHHHHHHHHHHhcccCeEEEEEECCceecCcccccccchhhhhhcccCChHHHHHHH
Confidence                           3999999888888877764   3699999999998742 11 1000        000111111 1


Q ss_pred             HcC----C------------CCCCCCCchhhhhhhhhccceeEE
Q 025755          212 LKG----F------------FFTTPSHSYMLERTLVLNQGVRLY  239 (248)
Q Consensus       212 ~~~----~------------~l~~~~~~~~~g~~l~vd~g~~~~  239 (248)
                      ..+    +            ++......++||+++.+|||..+.
T Consensus       630 ~~r~~l~r~v~peDVA~av~~L~s~~~~~~TG~~i~vDGG~~~~  673 (676)
T TIGR02632       630 AKRTLLKRHIFPADIAEAVFFLASSKSEKTTGCIITVDGGVPAA  673 (676)
T ss_pred             HhcCCcCCCcCHHHHHHHHHHHhCCcccCCcCcEEEECCCchhc
Confidence            111    1            455556789999999999997643

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=99.92  E-value=3.1e-24  Score=180.47  Aligned_cols=215  Identities=15%  Similarity=0.060  Sum_probs=151.6

Q ss_pred             EEEEcCccHHHHHHHHHHHHCCC-eEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC----CCCEEEE
Q 025755            9 VCVTGAGGYIASWLVKYLLLKGY-MVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA----GCTGVFH   83 (248)
Q Consensus         9 vlVtG~~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~----~id~vi~   83 (248)
                      ||||||+|+||+++++.|+++|+ +|++++|.....   .....     ....+..|+.+.+.++.+.+    ++|+|||
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~---~~~~~-----~~~~~~~d~~~~~~~~~~~~~~~~~~D~vvh   72 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH---KFLNL-----ADLVIADYIDKEDFLDRLEKGAFGKIEAIFH   72 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch---hhhhh-----hheeeeccCcchhHHHHHHhhccCCCCEEEE
Confidence            68999999999999999999998 788887754321   11111     01346688888888877764    7999999


Q ss_pred             ccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccccchHH
Q 025755           84 VACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYC  163 (248)
Q Consensus        84 ~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~  163 (248)
                      +|+.....  ..++...+++|+.++.+++++|.+.+. ++|++||.. +|+..    ..+++|+++.     .+|.+.|+
T Consensus        73 ~A~~~~~~--~~~~~~~~~~n~~~~~~ll~~~~~~~~-~~v~~SS~~-vy~~~----~~~~~e~~~~-----~~p~~~Y~  139 (314)
T TIGR02197        73 QGACSDTT--ETDGEYMMENNYQYSKRLLDWCAEKGI-PFIYASSAA-TYGDG----EAGFREGREL-----ERPLNVYG  139 (314)
T ss_pred             CccccCcc--ccchHHHHHHHHHHHHHHHHHHHHhCC-cEEEEccHH-hcCCC----CCCcccccCc-----CCCCCHHH
Confidence            99975432  234467889999999999999998876 899999965 55543    2334554432     13456799


Q ss_pred             HHHHHHHHHHHHHHH--hCCccEEEEccCeeecCCCCCCC---CccHHHHHHHHcCCCCCCC------CCchhhhhhhhh
Q 025755          164 LAKTIAEIQALEYAK--RGELDIVTVCPSIVIGPMLQPTI---NTSSLLLLGFLKGFFFTTP------SHSYMLERTLVL  232 (248)
Q Consensus       164 ~sK~~~e~l~~~~~~--~~~i~v~~vrpg~i~g~~~~~~~---~~~~~~~~~~~~~~~l~~~------~~~~~~g~~l~v  232 (248)
                      .+|..+|.+++++..  ..+++++++||+.+|||......   .....++..+..+..+...      .++....+.+|+
T Consensus       140 ~sK~~~e~~~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v  219 (314)
T TIGR02197       140 YSKFLFDQYVRRRVLPEALSAQVVGLRYFNVYGPREYHKGKMASVAFHLFNQIKAGGNVKLFKSSEGFKDGEQLRDFVYV  219 (314)
T ss_pred             HHHHHHHHHHHHHhHhhccCCceEEEEEeeccCCCCCCCCCcccHHHHHHHHHhcCCCeEEecCccccCCCCceeeeEEH
Confidence            999999999988643  23579999999999999864321   2334556666666644332      223344578999


Q ss_pred             ccceeEEEeecc
Q 025755          233 NQGVRLYRCKIQ  244 (248)
Q Consensus       233 d~g~~~~~~~~~  244 (248)
                      ||...++..++.
T Consensus       220 ~D~a~~i~~~~~  231 (314)
T TIGR02197       220 KDVVDVNLWLLE  231 (314)
T ss_pred             HHHHHHHHHHHh
Confidence            998776655443

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.92  E-value=3.9e-24  Score=188.57  Aligned_cols=208  Identities=17%  Similarity=0.107  Sum_probs=148.0

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-------
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-------   76 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-------   76 (248)
                      +++++++||||+|+||+++++.|+++|++|++++++...........  .  -+..++.+|++|.++++++++       
T Consensus       208 ~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~--~--~~~~~~~~Dv~~~~~~~~~~~~~~~~~g  283 (450)
T PRK08261        208 LAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVAN--R--VGGTALALDITAPDAPARIAEHLAERHG  283 (450)
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHH--H--cCCeEEEEeCCCHHHHHHHHHHHHHhCC
Confidence            56899999999999999999999999999999988542211111111  1  123578899999998887765       


Q ss_pred             CCCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHHhc----CCCEEEEEeccceeccCCCCCCCCccCCCC
Q 025755           77 GCTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCVKA----KVKRVVVVSSIGAVMLNPNWPKGQVMDEEC  148 (248)
Q Consensus        77 ~id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~~~----~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~  148 (248)
                      ++|+||||||.......    .+.+...+++|+.++.++.+++.+.    ..++||++||..++.+.+....        
T Consensus       284 ~id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~g~~~~~~--------  355 (450)
T PRK08261        284 GLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAGNRGQTN--------  355 (450)
T ss_pred             CCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCCChH--------
Confidence            58999999997654321    2345678899999999999999774    3379999999877766544333        


Q ss_pred             CCchhhhccccchHHHHHH----HHHHHHHHHHHhCCccEEEEccCeeecCCCCCCCCccHHHHHHH---HcC-------
Q 025755          149 WSDEEFCKATENYYCLAKT----IAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTINTSSLLLLGF---LKG-------  214 (248)
Q Consensus       149 ~~~~~~~~~~~~~Y~~sK~----~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~---~~~-------  214 (248)
                                   |+.+|.    +.+.++.++.++ ++++++|+||.+.+++..............+   .++       
T Consensus       356 -------------Y~asKaal~~~~~~la~el~~~-gi~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~l~~~~~p~dva  421 (450)
T PRK08261        356 -------------YAASKAGVIGLVQALAPLLAER-GITINAVAPGFIETQMTAAIPFATREAGRRMNSLQQGGLPVDVA  421 (450)
T ss_pred             -------------HHHHHHHHHHHHHHHHHHHhhh-CcEEEEEEeCcCcchhhhccchhHHHHHhhcCCcCCCCCHHHHH
Confidence                         999998    555555555543 5999999999998876432111001111110   010       


Q ss_pred             ---CCCCCCCCchhhhhhhhhcccee
Q 025755          215 ---FFFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       215 ---~~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                         .|+.++.+.+++|+++.+||+..
T Consensus       422 ~~~~~l~s~~~~~itG~~i~v~g~~~  447 (450)
T PRK08261        422 ETIAWLASPASGGVTGNVVRVCGQSL  447 (450)
T ss_pred             HHHHHHhChhhcCCCCCEEEECCCcc
Confidence               16777888999999999998753

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=99.92  E-value=1.2e-23  Score=177.68  Aligned_cols=178  Identities=26%  Similarity=0.236  Sum_probs=138.3

Q ss_pred             EEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC--CCCEEEEcc
Q 025755            8 RVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA--GCTGVFHVA   85 (248)
Q Consensus         8 ~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~--~id~vi~~a   85 (248)
                      +|+||||+|+||+++++.|+++|++|++++|...... ........ ..++.++.+|+.|.+++.++++  ++|+|||||
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~d~vv~~a   78 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSP-EALKRGER-ITRVTFVEGDLRDRELLDRLFEEHKIDAVIHFA   78 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccch-hhhhhhcc-ccceEEEECCCCCHHHHHHHHHhCCCcEEEECc
Confidence            5899999999999999999999999998876432211 11111111 1257788999999999999886  699999999


Q ss_pred             ccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccccchHHHH
Q 025755           86 CPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLA  165 (248)
Q Consensus        86 g~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~s  165 (248)
                      |..........+.+.++.|+.++.++++++.+.+.+++|++||.. .++...   ..+++|+++..+      .+.|+.+
T Consensus        79 g~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~ss~~-~~g~~~---~~~~~e~~~~~~------~~~y~~s  148 (328)
T TIGR01179        79 GLIAVGESVQDPLKYYRNNVVNTLNLLEAMQQTGVKKFIFSSSAA-VYGEPS---SIPISEDSPLGP------INPYGRS  148 (328)
T ss_pred             cccCcchhhcCchhhhhhhHHHHHHHHHHHHhcCCCEEEEecchh-hcCCCC---CCCccccCCCCC------CCchHHH
Confidence            976443333444678899999999999999998888999999865 444322   345677765543      4559999


Q ss_pred             HHHHHHHHHHHHHh-CCccEEEEccCeeecCCC
Q 025755          166 KTIAEIQALEYAKR-GELDIVTVCPSIVIGPML  197 (248)
Q Consensus       166 K~~~e~l~~~~~~~-~~i~v~~vrpg~i~g~~~  197 (248)
                      |..+|.++..++.+ .+++++++||+.+|||..
T Consensus       149 K~~~e~~~~~~~~~~~~~~~~ilR~~~v~g~~~  181 (328)
T TIGR01179       149 KLMSERILRDLSKADPGLSYVILRYFNVAGADP  181 (328)
T ss_pred             HHHHHHHHHHHHHhccCCCEEEEecCcccCCCC
Confidence            99999999999876 679999999999999854

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>PRK05650 short chain dehydrogenase; Provisional

Probab=99.92  E-value=2e-23  Score=172.13  Aligned_cols=170  Identities=21%  Similarity=0.220  Sum_probs=128.5

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-------CCC
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-------GCT   79 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-------~id   79 (248)
                      |+++||||+|+||++++++|+++|++|++++|+... .......+.....++.++++|++|.+++.++++       ++|
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~-~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id   79 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEG-GEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGID   79 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            589999999999999999999999999999988643 233333344445678899999999998888765       589


Q ss_pred             EEEEccccCCCCCCC----CccccchhhhHHHHHHHHHHH----HhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCc
Q 025755           80 GVFHVACPVPVGKVP----NPEVQLIDPAVVGTKNVLNSC----VKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSD  151 (248)
Q Consensus        80 ~vi~~ag~~~~~~~~----~~~~~~~~~n~~g~~~~~~~~----~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~  151 (248)
                      +||||||........    +.+...+++|+.++.++.+.+    .+.+.++||++||..++.+.+....           
T Consensus        80 ~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~-----------  148 (270)
T PRK05650         80 VIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGLMQGPAMSS-----------  148 (270)
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhcCCCCCchH-----------
Confidence            999999986543222    234557899999887766664    4556789999999876655443333           


Q ss_pred             hhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCC
Q 025755          152 EEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQ  198 (248)
Q Consensus       152 ~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~  198 (248)
                                |+.+|++.+.+++.++.+   .++++++|+||.+.+++..
T Consensus       149 ----------Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~  188 (270)
T PRK05650        149 ----------YNVAKAGVVALSETLLVELADDEIGVHVVCPSFFQTNLLD  188 (270)
T ss_pred             ----------HHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccccCccc
Confidence                      999998655555554443   2699999999999998754

>PRK05693 short chain dehydrogenase; Provisional

Probab=99.92  E-value=9.7e-24  Score=174.38  Aligned_cols=165  Identities=19%  Similarity=0.205  Sum_probs=125.4

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-------CC
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-------GC   78 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-------~i   78 (248)
                      ||+++||||+||||+++++.|+++|++|++++|+..+.  ....   .  .++.++.+|++|.++++++++       ++
T Consensus         1 mk~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~--~~~~---~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   73 (274)
T PRK05693          1 MPVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDV--EALA---A--AGFTAVQLDVNDGAALARLAEELEAEHGGL   73 (274)
T ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHH--HHHH---H--CCCeEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence            47999999999999999999999999999999876321  1111   1  246788999999998887764       58


Q ss_pred             CEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHHhc---CCCEEEEEeccceeccCCCCCCCCccCCCCCCc
Q 025755           79 TGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCVKA---KVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSD  151 (248)
Q Consensus        79 d~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~~~---~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~  151 (248)
                      |+||||||.......    .+.+...+++|+.++.++++++.+.   +.++||++||..+..+.+..             
T Consensus        74 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-------------  140 (274)
T PRK05693         74 DVLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRSRGLVVNIGSVSGVLVTPFA-------------  140 (274)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCEEEEECCccccCCCCCc-------------
Confidence            999999997544322    2344678899999999988887553   44789999997766554432             


Q ss_pred             hhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCC
Q 025755          152 EEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQ  198 (248)
Q Consensus       152 ~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~  198 (248)
                              ..|+.+|...+.+.+.++.+   .|+++++++||.+.+++..
T Consensus       141 --------~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~  182 (274)
T PRK05693        141 --------GAYCASKAAVHALSDALRLELAPFGVQVMEVQPGAIASQFAS  182 (274)
T ss_pred             --------cHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCcccccccc
Confidence                    23999998666665555432   4699999999999998644

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=99.92  E-value=6.5e-24  Score=171.61  Aligned_cols=169  Identities=19%  Similarity=0.139  Sum_probs=128.8

Q ss_pred             EEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-------CCCEE
Q 025755            9 VCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-------GCTGV   81 (248)
Q Consensus         9 vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-------~id~v   81 (248)
                      ++|||++|+||+++++.|+++|++|++++|+..+........+.....++.++.+|++|.++++++++       .+|+|
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   80 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDIL   80 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            58999999999999999999999999999875322222223333334568899999999999888775       36999


Q ss_pred             EEccccCCCCC----CCCccccchhhhHHHHHHHHHHHHh----cCCCEEEEEeccceeccCCCCCCCCccCCCCCCchh
Q 025755           82 FHVACPVPVGK----VPNPEVQLIDPAVVGTKNVLNSCVK----AKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEE  153 (248)
Q Consensus        82 i~~ag~~~~~~----~~~~~~~~~~~n~~g~~~~~~~~~~----~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~  153 (248)
                      ||+||......    ..+.+...+++|+.++.++++.+.+    .+.+++|++||..++++.+....             
T Consensus        81 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~g~~~~~~-------------  147 (239)
T TIGR01830        81 VNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLMGNAGQAN-------------  147 (239)
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCCCCch-------------
Confidence            99999754321    1234567889999999999998875    35579999999877776544333             


Q ss_pred             hhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCC
Q 025755          154 FCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQ  198 (248)
Q Consensus       154 ~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~  198 (248)
                              |+.+|.+.+.+++.++.+   .++++++++||.+.++...
T Consensus       148 --------y~~~k~a~~~~~~~l~~~~~~~g~~~~~i~pg~~~~~~~~  187 (239)
T TIGR01830       148 --------YAASKAGVIGFTKSLAKELASRNITVNAVAPGFIDTDMTD  187 (239)
T ss_pred             --------hHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCCCChhhh
Confidence                    999998777766666543   3699999999999887543

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK07326 short chain dehydrogenase; Provisional

Probab=99.92  E-value=1.6e-23  Score=169.35  Aligned_cols=174  Identities=19%  Similarity=0.128  Sum_probs=131.9

Q ss_pred             CCCCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC----
Q 025755            1 MSGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA----   76 (248)
Q Consensus         1 m~~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~----   76 (248)
                      |+.+++++++||||+|+||+++++.|+++|++|++++|+... .......+... .++.++.+|+.|.+++..+++    
T Consensus         1 m~~~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~-~~~~~~~l~~~-~~~~~~~~D~~~~~~~~~~~~~~~~   78 (237)
T PRK07326          1 MMSLKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKE-LEEAAAELNNK-GNVLGLAADVRDEADVQRAVDAIVA   78 (237)
T ss_pred             CCCCCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHH-HHHHHHHHhcc-CcEEEEEccCCCHHHHHHHHHHHHH
Confidence            566778999999999999999999999999999999997632 22233333322 578899999999998887775    


Q ss_pred             ---CCCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHHhc---CCCEEEEEeccceeccCCCCCCCCccCC
Q 025755           77 ---GCTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCVKA---KVKRVVVVSSIGAVMLNPNWPKGQVMDE  146 (248)
Q Consensus        77 ---~id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~~~---~~~~iV~vSS~~~~~~~~~~~~~~~~~e  146 (248)
                         .+|+|||++|.......    .+.+.+.+++|+.++.++++++.+.   +.++||++||..+..+....        
T Consensus        79 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~--------  150 (237)
T PRK07326         79 AFGGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISSLAGTNFFAGG--------  150 (237)
T ss_pred             HcCCCCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECChhhccCCCCC--------
Confidence               68999999987654321    2334577899999999988887643   45789999997654433222        


Q ss_pred             CCCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCC
Q 025755          147 ECWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPML  197 (248)
Q Consensus       147 ~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~  197 (248)
                                   ..|+.+|+..+.+.+.++.+   .|+++++++||++.++..
T Consensus       151 -------------~~y~~sk~a~~~~~~~~~~~~~~~gi~v~~v~pg~~~t~~~  191 (237)
T PRK07326        151 -------------AAYNASKFGLVGFSEAAMLDLRQYGIKVSTIMPGSVATHFN  191 (237)
T ss_pred             -------------chHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeccccCccc
Confidence                         23999998777776666432   479999999999988754

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=99.91  E-value=1.7e-23  Score=170.51  Aligned_cols=165  Identities=17%  Similarity=0.125  Sum_probs=124.2

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-------CCC
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-------GCT   79 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-------~id   79 (248)
                      |+++||||+|+||+++++.|+++|++|++++|+..+. ......+   ..++.++.+|++|.++++++++       ++|
T Consensus         1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~-~~~~~~~---~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id   76 (248)
T PRK10538          1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERL-QELKDEL---GDNLYIAQLDVRNRAAIEEMLASLPAEWRNID   76 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHH-HHHHHHh---ccceEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            4899999999999999999999999999999986422 1111111   2468899999999998887765       689


Q ss_pred             EEEEccccCCCC-----CCCCccccchhhhHHHHHHHHHHH----HhcCCCEEEEEeccceeccCCCCCCCCccCCCCCC
Q 025755           80 GVFHVACPVPVG-----KVPNPEVQLIDPAVVGTKNVLNSC----VKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWS  150 (248)
Q Consensus        80 ~vi~~ag~~~~~-----~~~~~~~~~~~~n~~g~~~~~~~~----~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~  150 (248)
                      +|||+||.....     ...+.+..++++|+.++.++++.+    .+.+.++||++||..+..+.+..            
T Consensus        77 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~------------  144 (248)
T PRK10538         77 VLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGG------------  144 (248)
T ss_pred             EEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccCCCCCCC------------
Confidence            999999974311     122345678999999976665555    44567899999997655444322            


Q ss_pred             chhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCC
Q 025755          151 DEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPM  196 (248)
Q Consensus       151 ~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~  196 (248)
                               ..|+.+|.+.+.+++.++.+   .++++++++||.+.|+.
T Consensus       145 ---------~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~i~~~~  184 (248)
T PRK10538        145 ---------NVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTE  184 (248)
T ss_pred             ---------chhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCeecccc
Confidence                     23999998888887777654   36999999999998654

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=99.91  E-value=3.1e-25  Score=184.14  Aligned_cols=190  Identities=23%  Similarity=0.221  Sum_probs=138.1

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC--CCCEEEEc
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA--GCTGVFHV   84 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~--~id~vi~~   84 (248)
                      |+|||||++|+||+++.+.|.++|++|+.+.|+                      ..|++|.+.+.++++  ++|+||||
T Consensus         1 MriLI~GasG~lG~~l~~~l~~~~~~v~~~~r~----------------------~~dl~d~~~~~~~~~~~~pd~Vin~   58 (286)
T PF04321_consen    1 MRILITGASGFLGSALARALKERGYEVIATSRS----------------------DLDLTDPEAVAKLLEAFKPDVVINC   58 (286)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTTSEEEEEESTT----------------------CS-TTSHHHHHHHHHHH--SEEEE-
T ss_pred             CEEEEECCCCHHHHHHHHHHhhCCCEEEEeCch----------------------hcCCCCHHHHHHHHHHhCCCeEecc
Confidence            589999999999999999999999999998665                      479999999999887  58999999


Q ss_pred             cccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccccchHHH
Q 025755           85 ACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCL  164 (248)
Q Consensus        85 ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~  164 (248)
                      ||.......+..+...+++|+.++.+++++|.+.+. ++||+||...+.|..    ..+++|+++.+|      .+.||.
T Consensus        59 aa~~~~~~ce~~p~~a~~iN~~~~~~la~~~~~~~~-~li~~STd~VFdG~~----~~~y~E~d~~~P------~~~YG~  127 (286)
T PF04321_consen   59 AAYTNVDACEKNPEEAYAINVDATKNLAEACKERGA-RLIHISTDYVFDGDK----GGPYTEDDPPNP------LNVYGR  127 (286)
T ss_dssp             -----HHHHHHSHHHHHHHHTHHHHHHHHHHHHCT--EEEEEEEGGGS-SST----SSSB-TTS----------SSHHHH
T ss_pred             ceeecHHhhhhChhhhHHHhhHHHHHHHHHHHHcCC-cEEEeeccEEEcCCc----ccccccCCCCCC------CCHHHH
Confidence            998776555556688999999999999999999885 999999977655542    566888887766      455999


Q ss_pred             HHHHHHHHHHHHHHhCCccEEEEccCeeecCCCCCCCCccHHHHHHHHcCCCCCCCCCchhhhhhhhhccceeE
Q 025755          165 AKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKGFFFTTPSHSYMLERTLVLNQGVRL  238 (248)
Q Consensus       165 sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~l~vd~g~~~  238 (248)
                      +|..+|..++...+    +..++|++++||+...   .....++..+..++.+....+.+  +..+++++...+
T Consensus       128 ~K~~~E~~v~~~~~----~~~IlR~~~~~g~~~~---~~~~~~~~~~~~~~~i~~~~d~~--~~p~~~~dlA~~  192 (286)
T PF04321_consen  128 SKLEGEQAVRAACP----NALILRTSWVYGPSGR---NFLRWLLRRLRQGEPIKLFDDQY--RSPTYVDDLARV  192 (286)
T ss_dssp             HHHHHHHHHHHH-S----SEEEEEE-SEESSSSS---SHHHHHHHHHHCTSEEEEESSCE--E--EEHHHHHHH
T ss_pred             HHHHHHHHHHHhcC----CEEEEecceecccCCC---chhhhHHHHHhcCCeeEeeCCce--eCCEEHHHHHHH
Confidence            99999999988554    5699999999999322   46667778888777666555544  344666665443

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>PRK09072 short chain dehydrogenase; Provisional

Probab=99.91  E-value=3.5e-23  Score=170.03  Aligned_cols=171  Identities=18%  Similarity=0.145  Sum_probs=129.8

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC------C
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA------G   77 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~------~   77 (248)
                      +++++++||||+|+||+++++.|+++|++|++++|+... .......+ ....++.++.+|++|.+++.++++      .
T Consensus         3 ~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~-~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~   80 (263)
T PRK09072          3 LKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEK-LEALAARL-PYPGRHRWVVADLTSEAGREAVLARAREMGG   80 (263)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHH-HHHHHHHH-hcCCceEEEEccCCCHHHHHHHHHHHHhcCC
Confidence            788999999999999999999999999999999998642 22222233 234578999999999998877754      5


Q ss_pred             CCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHHhc----CCCEEEEEeccceeccCCCCCCCCccCCCCC
Q 025755           78 CTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCVKA----KVKRVVVVSSIGAVMLNPNWPKGQVMDEECW  149 (248)
Q Consensus        78 id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~~~----~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~  149 (248)
                      +|+||||||.......    .+.+...+++|+.++.++++.+.+.    +.++||++||..+..+.+....         
T Consensus        81 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~---------  151 (263)
T PRK09072         81 INVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSIGYPGYAS---------  151 (263)
T ss_pred             CCEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCcCCCCccH---------
Confidence            7999999997653321    1233567899999999988888653    4578999999776665543322         


Q ss_pred             CchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCC
Q 025755          150 SDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPML  197 (248)
Q Consensus       150 ~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~  197 (248)
                                  |+.+|++.+.+++.++.+   .+++|++++||.+.+++.
T Consensus       152 ------------Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~~~  190 (263)
T PRK09072        152 ------------YCASKFALRGFSEALRRELADTGVRVLYLAPRATRTAMN  190 (263)
T ss_pred             ------------HHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccccch
Confidence                        999998665555555533   369999999999988764

>PRK08251 short chain dehydrogenase; Provisional

Probab=99.91  E-value=2.5e-23  Score=169.32  Aligned_cols=172  Identities=15%  Similarity=0.114  Sum_probs=129.6

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCC--CCCeEEEEccCCCHHHHHHHhC-------
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGA--SENLQLFKTDLLDYEALCAATA-------   76 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Di~d~~~~~~~~~-------   76 (248)
                      +|+++||||+||||+++++.|+++|++|++.+|+.... ......+...  ..++.++.+|++|.+++.++++       
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   80 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRL-EELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELG   80 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHH-HHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            58999999999999999999999999999999986432 2222222221  3468899999999998877665       


Q ss_pred             CCCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHH----hcCCCEEEEEeccceeccCCCCCCCCccCCCC
Q 025755           77 GCTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCV----KAKVKRVVVVSSIGAVMLNPNWPKGQVMDEEC  148 (248)
Q Consensus        77 ~id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~----~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~  148 (248)
                      ++|++|||||.......    .+.+...+++|+.++.++++++.    +.+.++||++||..+..+.+..          
T Consensus        81 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~----------  150 (248)
T PRK08251         81 GLDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAVRGLPGV----------  150 (248)
T ss_pred             CCCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccCCCCC----------
Confidence            58999999998654322    12235678999999988888764    4467899999998766654320          


Q ss_pred             CCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCC
Q 025755          149 WSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQ  198 (248)
Q Consensus       149 ~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~  198 (248)
                                ...|+.||+..+.++..++.+   .++++++++||++.+++..
T Consensus       151 ----------~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~  193 (248)
T PRK08251        151 ----------KAAYAASKAGVASLGEGLRAELAKTPIKVSTIEPGYIRSEMNA  193 (248)
T ss_pred             ----------cccHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcCcchhhh
Confidence                      123999998777777666643   2699999999999998644

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=99.91  E-value=3e-23  Score=168.88  Aligned_cols=204  Identities=17%  Similarity=0.100  Sum_probs=141.0

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCC-CCCeEEEEccCC--CHHHHHHHh-----
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGA-SENLQLFKTDLL--DYEALCAAT-----   75 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Di~--d~~~~~~~~-----   75 (248)
                      +++|+++||||+|+||.++++.|+++|++|++++|+..+. ....+++... ..++.++.+|+.  +.+++++++     
T Consensus        10 ~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~-~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~   88 (247)
T PRK08945         10 LKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKL-EAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEE   88 (247)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHH-HHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHH
Confidence            6789999999999999999999999999999999986432 2222333222 245777888885  555554443     


Q ss_pred             --CCCCEEEEccccCCCCC-----CCCccccchhhhHHHHHHHHHHHH----hcCCCEEEEEeccceeccCCCCCCCCcc
Q 025755           76 --AGCTGVFHVACPVPVGK-----VPNPEVQLIDPAVVGTKNVLNSCV----KAKVKRVVVVSSIGAVMLNPNWPKGQVM  144 (248)
Q Consensus        76 --~~id~vi~~ag~~~~~~-----~~~~~~~~~~~n~~g~~~~~~~~~----~~~~~~iV~vSS~~~~~~~~~~~~~~~~  144 (248)
                        ..+|+||||||......     ..+.+...+++|+.++.++++++.    +.+.++||++||..+..+.+....    
T Consensus        89 ~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~----  164 (247)
T PRK08945         89 QFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGRQGRANWGA----  164 (247)
T ss_pred             HhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhhcCCCCCCcc----
Confidence              36899999999754321     123456789999999888888775    456789999999776655443333    


Q ss_pred             CCCCCCchhhhccccchHHHHHHHHHHHHHHHHHhC---CccEEEEccCeeecCCCCCCC-------CccHHHHHHHHcC
Q 025755          145 DEECWSDEEFCKATENYYCLAKTIAEIQALEYAKRG---ELDIVTVCPSIVIGPMLQPTI-------NTSSLLLLGFLKG  214 (248)
Q Consensus       145 ~e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~---~i~v~~vrpg~i~g~~~~~~~-------~~~~~~~~~~~~~  214 (248)
                                       |+.||.+.+.+++.++.+.   ++++++++||.+.+++.....       ...+..+..... 
T Consensus       165 -----------------Y~~sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~-  226 (247)
T PRK08945        165 -----------------YAVSKFATEGMMQVLADEYQGTNLRVNCINPGGTRTAMRASAFPGEDPQKLKTPEDIMPLYL-  226 (247)
T ss_pred             -----------------cHHHHHHHHHHHHHHHHHhcccCEEEEEEecCCccCcchhhhcCcccccCCCCHHHHHHHHH-
Confidence                             9999998888887776644   699999999999887532210       011111222221 


Q ss_pred             CCCCCCCCchhhhhhhh
Q 025755          215 FFFTTPSHSYMLERTLV  231 (248)
Q Consensus       215 ~~l~~~~~~~~~g~~l~  231 (248)
                       ++..+...+++|+++.
T Consensus       227 -~~~~~~~~~~~g~~~~  242 (247)
T PRK08945        227 -YLMGDDSRRKNGQSFD  242 (247)
T ss_pred             -HHhCccccccCCeEEe
Confidence             4555566677777653

>PRK06924 short chain dehydrogenase; Provisional

Probab=99.91  E-value=1.2e-23  Score=171.52  Aligned_cols=168  Identities=20%  Similarity=0.136  Sum_probs=122.9

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCC-------
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGC-------   78 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~i-------   78 (248)
                      ||+++||||+|+||++++++|+++|++|++++|+..+......   .....++.++.+|++|.++++++++++       
T Consensus         1 ~k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~---~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   77 (251)
T PRK06924          1 MRYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLA---EQYNSNLTFHSLDLQDVHELETNFNEILSSIQED   77 (251)
T ss_pred             CcEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHH---hccCCceEEEEecCCCHHHHHHHHHHHHHhcCcc
Confidence            4799999999999999999999999999999987632211111   112357889999999999998887532       


Q ss_pred             --C--EEEEccccCCCC-----CCCCccccchhhhHHHHHHHHHHHH----hc-CCCEEEEEeccceeccCCCCCCCCcc
Q 025755           79 --T--GVFHVACPVPVG-----KVPNPEVQLIDPAVVGTKNVLNSCV----KA-KVKRVVVVSSIGAVMLNPNWPKGQVM  144 (248)
Q Consensus        79 --d--~vi~~ag~~~~~-----~~~~~~~~~~~~n~~g~~~~~~~~~----~~-~~~~iV~vSS~~~~~~~~~~~~~~~~  144 (248)
                        +  ++|||||.....     ...+.+...+++|+.++..+++.+.    +. +.++||++||..+..+.+.       
T Consensus        78 ~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~-------  150 (251)
T PRK06924         78 NVSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKNPYFG-------  150 (251)
T ss_pred             cCCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhcCCCCC-------
Confidence              2  799999975432     1123456678899998766665554    33 3468999999765444332       


Q ss_pred             CCCCCCchhhhccccchHHHHHHHHHHHHHHHHHh-----CCccEEEEccCeeecCCC
Q 025755          145 DEECWSDEEFCKATENYYCLAKTIAEIQALEYAKR-----GELDIVTVCPSIVIGPML  197 (248)
Q Consensus       145 ~e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~-----~~i~v~~vrpg~i~g~~~  197 (248)
                                    ...|+.+|++.+.+++.++.+     .++++++|+||.+.+++.
T Consensus       151 --------------~~~Y~~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~  194 (251)
T PRK06924        151 --------------WSAYCSSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQ  194 (251)
T ss_pred             --------------cHHHhHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccHhH
Confidence                          234999999888887777643     369999999999998763

>PRK07023 short chain dehydrogenase; Provisional

Probab=99.91  E-value=1.2e-23  Score=170.82  Aligned_cols=165  Identities=24%  Similarity=0.222  Sum_probs=126.2

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC---------
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA---------   76 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~---------   76 (248)
                      |++++||||+|+||++++++|+++|++|++++|+.....      ......++.++++|+.|.++++++++         
T Consensus         1 ~~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~~------~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   74 (243)
T PRK07023          1 AVRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPSL------AAAAGERLAEVELDLSDAAAAAAWLAGDLLAAFVD   74 (243)
T ss_pred             CceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchhh------hhccCCeEEEEEeccCCHHHHHHHHHHHHHHHhcc
Confidence            358999999999999999999999999999999764211      11123468899999999998888442         


Q ss_pred             --CCCEEEEccccCCCCC-----CCCccccchhhhHHHHHHHHHHHHh----cCCCEEEEEeccceeccCCCCCCCCccC
Q 025755           77 --GCTGVFHVACPVPVGK-----VPNPEVQLIDPAVVGTKNVLNSCVK----AKVKRVVVVSSIGAVMLNPNWPKGQVMD  145 (248)
Q Consensus        77 --~id~vi~~ag~~~~~~-----~~~~~~~~~~~n~~g~~~~~~~~~~----~~~~~iV~vSS~~~~~~~~~~~~~~~~~  145 (248)
                        .+|++|||||......     ..+.++..+++|+.++..+.+.+.+    .+.++||++||..+..+.+.+       
T Consensus        75 ~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~-------  147 (243)
T PRK07023         75 GASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAARNAYAGW-------  147 (243)
T ss_pred             CCCceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhcCCCCCc-------
Confidence              4789999999754321     1234467889999997766666543    456799999997765544332       


Q ss_pred             CCCCCchhhhccccchHHHHHHHHHHHHHHHHHh--CCccEEEEccCeeecCCC
Q 025755          146 EECWSDEEFCKATENYYCLAKTIAEIQALEYAKR--GELDIVTVCPSIVIGPML  197 (248)
Q Consensus       146 e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~--~~i~v~~vrpg~i~g~~~  197 (248)
                                    ..|+.+|.+.+.+++.++.+  .++++++|+||.+.+++.
T Consensus       148 --------------~~Y~~sK~a~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~  187 (243)
T PRK07023        148 --------------SVYCATKAALDHHARAVALDANRALRIVSLAPGVVDTGMQ  187 (243)
T ss_pred             --------------hHHHHHHHHHHHHHHHHHhcCCCCcEEEEecCCccccHHH
Confidence                          33999999999999888754  469999999999988753

>PLN02780 ketoreductase/ oxidoreductase

Probab=99.91  E-value=2e-23  Score=175.99  Aligned_cols=172  Identities=16%  Similarity=0.112  Sum_probs=122.1

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCC--CCCeEEEEccCCC--HHHHHH---HhCC
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGA--SENLQLFKTDLLD--YEALCA---ATAG   77 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Di~d--~~~~~~---~~~~   77 (248)
                      .+++++||||++|||++++++|+++|++|++++|+.+.. +...+++...  ..++..+.+|+++  .+.+++   .+.+
T Consensus        52 ~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l-~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~  130 (320)
T PLN02780         52 YGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKL-KDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEG  130 (320)
T ss_pred             cCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHH-HHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcC
Confidence            479999999999999999999999999999999987432 2223333322  2357788899985  333333   3333


Q ss_pred             --CCEEEEccccCCCC--C----CCCccccchhhhHHHHHHHHHHHHh----cCCCEEEEEeccceec-c-CCCCCCCCc
Q 025755           78 --CTGVFHVACPVPVG--K----VPNPEVQLIDPAVVGTKNVLNSCVK----AKVKRVVVVSSIGAVM-L-NPNWPKGQV  143 (248)
Q Consensus        78 --id~vi~~ag~~~~~--~----~~~~~~~~~~~n~~g~~~~~~~~~~----~~~~~iV~vSS~~~~~-~-~~~~~~~~~  143 (248)
                        +|++|||||.....  .    ..+.++..+++|+.++.++.+++.+    .+.++||++||..+.. + .+..     
T Consensus       131 ~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~p~~-----  205 (320)
T PLN02780        131 LDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAIVIPSDPLY-----  205 (320)
T ss_pred             CCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCCCccc-----
Confidence              56999999975321  1    1233456899999999888777654    4668999999977643 2 2322     


Q ss_pred             cCCCCCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCC
Q 025755          144 MDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQ  198 (248)
Q Consensus       144 ~~e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~  198 (248)
                                      ..|+.||++.+.+.+.++.+   .|++|++++||.+.+++..
T Consensus       206 ----------------~~Y~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~~~~  247 (320)
T PLN02780        206 ----------------AVYAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMAS  247 (320)
T ss_pred             ----------------hHHHHHHHHHHHHHHHHHHHHhccCeEEEEEeeCceecCccc
Confidence                            23999997555555554433   3699999999999998754

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.91  E-value=3.5e-23  Score=177.25  Aligned_cols=181  Identities=23%  Similarity=0.272  Sum_probs=132.8

Q ss_pred             EEEEEcCccHHHHHHHHHHHHCC--CeEEEEEcCCCchh-hHHhh-hhc-----C-C-C-CCeEEEEccCCC------HH
Q 025755            8 RVCVTGAGGYIASWLVKYLLLKG--YMVHGTVRDPCDEK-NAHLK-KLE-----G-A-S-ENLQLFKTDLLD------YE   69 (248)
Q Consensus         8 ~vlVtG~~g~iG~~~~~~l~~~g--~~V~~~~r~~~~~~-~~~~~-~~~-----~-~-~-~~~~~~~~Di~d------~~   69 (248)
                      +|+||||||+||++++++|+++|  ++|+++.|+..... ...++ .+.     . . . .++.++.+|+++      .+
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~   80 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA   80 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence            58999999999999999999998  67999999864221 11111 110     0 0 1 578999999975      35


Q ss_pred             HHHHHhCCCCEEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCC
Q 025755           70 ALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECW  149 (248)
Q Consensus        70 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~  149 (248)
                      ....+.+++|+|||||+....   ..+...+.++|+.++.++++++.+.+.+++|++||...+....    ..++.|+++
T Consensus        81 ~~~~~~~~~d~vih~a~~~~~---~~~~~~~~~~nv~g~~~ll~~a~~~~~~~~v~iSS~~v~~~~~----~~~~~~~~~  153 (367)
T TIGR01746        81 EWERLAENVDTIVHNGALVNW---VYPYSELRAANVLGTREVLRLAASGRAKPLHYVSTISVLAAID----LSTVTEDDA  153 (367)
T ss_pred             HHHHHHhhCCEEEeCCcEecc---CCcHHHHhhhhhHHHHHHHHHHhhCCCceEEEEccccccCCcC----CCCcccccc
Confidence            677777899999999997653   2344667789999999999999998888899999976543321    122333333


Q ss_pred             CchhhhccccchHHHHHHHHHHHHHHHHHhCCccEEEEccCeeecCCC
Q 025755          150 SDEEFCKATENYYCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPML  197 (248)
Q Consensus       150 ~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~  197 (248)
                      ..+ ....+.+.|+.+|..+|.++..+..+ +++++++|||.++|+..
T Consensus       154 ~~~-~~~~~~~~Y~~sK~~~E~~~~~~~~~-g~~~~i~Rpg~v~G~~~  199 (367)
T TIGR01746       154 IVT-PPPGLAGGYAQSKWVAELLVREASDR-GLPVTIVRPGRILGNSY  199 (367)
T ss_pred             ccc-cccccCCChHHHHHHHHHHHHHHHhc-CCCEEEECCCceeecCC
Confidence            221 11123456999999999999888766 69999999999999844

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.91  E-value=2.5e-23  Score=179.80  Aligned_cols=198  Identities=16%  Similarity=0.097  Sum_probs=140.0

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhH-HhhhhcCCCCCeEEEEccCCCHHHHHHHhC----CC
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNA-HLKKLEGASENLQLFKTDLLDYEALCAATA----GC   78 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~----~i   78 (248)
                      .++++|+||||+|+||+++++.|+++|++|++++|+....... ..........++.++++|++|.+++.++++    ++
T Consensus        58 ~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~~~  137 (390)
T PLN02657         58 PKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSEGDPV  137 (390)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHhCCCC
Confidence            4578999999999999999999999999999999976422110 111111123468899999999999999987    58


Q ss_pred             CEEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccc
Q 025755           79 TGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKAT  158 (248)
Q Consensus        79 d~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~  158 (248)
                      |+||||++....     ...+.+++|+.++.++++++++.+.++||++||.+...+                        
T Consensus       138 D~Vi~~aa~~~~-----~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~~v~~p------------------------  188 (390)
T PLN02657        138 DVVVSCLASRTG-----GVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAICVQKP------------------------  188 (390)
T ss_pred             cEEEECCccCCC-----CCccchhhHHHHHHHHHHHHHHcCCCEEEEEeeccccCc------------------------
Confidence            999999885322     123457889999999999999999999999999753211                        


Q ss_pred             cchHHHHHHHHHHHHHHHHHhCCccEEEEccCeeecCCCCCCCCccHHHHHHHHcCCCCCCCCCchh-hhhhhhhcccee
Q 025755          159 ENYYCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKGFFFTTPSHSYM-LERTLVLNQGVR  237 (248)
Q Consensus       159 ~~~Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~g~~l~vd~g~~  237 (248)
                      ...|..+|...|..+..  .+.+++++++||+.+|++..        .++..+..+......+++.. ..+.++++|...
T Consensus       189 ~~~~~~sK~~~E~~l~~--~~~gl~~tIlRp~~~~~~~~--------~~~~~~~~g~~~~~~GdG~~~~~~~I~v~DlA~  258 (390)
T PLN02657        189 LLEFQRAKLKFEAELQA--LDSDFTYSIVRPTAFFKSLG--------GQVEIVKDGGPYVMFGDGKLCACKPISEADLAS  258 (390)
T ss_pred             chHHHHHHHHHHHHHHh--ccCCCCEEEEccHHHhcccH--------HHHHhhccCCceEEecCCcccccCceeHHHHHH
Confidence            12288999888877765  34579999999999997532        23344444544333333322 223466666544


Q ss_pred             EEE
Q 025755          238 LYR  240 (248)
Q Consensus       238 ~~~  240 (248)
                      ++.
T Consensus       259 ~i~  261 (390)
T PLN02657        259 FIA  261 (390)
T ss_pred             HHH
Confidence            433

>PRK08324 short chain dehydrogenase; Validated

Probab=99.90  E-value=5.8e-23  Score=189.07  Aligned_cols=167  Identities=24%  Similarity=0.167  Sum_probs=130.5

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-------
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-------   76 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-------   76 (248)
                      +++|+++||||+|+||+++++.|+++|++|++++|+... .....+.+... .++.++.+|++|.+++.++++       
T Consensus       420 l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~-~~~~~~~l~~~-~~v~~v~~Dvtd~~~v~~~~~~~~~~~g  497 (681)
T PRK08324        420 LAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEA-AEAAAAELGGP-DRALGVACDVTDEAAVQAAFEEAALAFG  497 (681)
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHH-HHHHHHHHhcc-CcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            568999999999999999999999999999999998642 22222223222 578899999999998887765       


Q ss_pred             CCCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHHh----cCC-CEEEEEeccceeccCCCCCCCCccCCC
Q 025755           77 GCTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCVK----AKV-KRVVVVSSIGAVMLNPNWPKGQVMDEE  147 (248)
Q Consensus        77 ~id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~~----~~~-~~iV~vSS~~~~~~~~~~~~~~~~~e~  147 (248)
                      ++|+||||||.......    .+.+...+++|+.++.++++++.+    .+. ++||++||..++.+.+...        
T Consensus       498 ~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~~~~~~--------  569 (681)
T PRK08324        498 GVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNPGPNFG--------  569 (681)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCCCCCcH--------
Confidence            58999999997654322    234567889999999999777653    343 7999999987776654433        


Q ss_pred             CCCchhhhccccchHHHHHHHHHHHHHHHHHhC---CccEEEEccCeee
Q 025755          148 CWSDEEFCKATENYYCLAKTIAEIQALEYAKRG---ELDIVTVCPSIVI  193 (248)
Q Consensus       148 ~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~---~i~v~~vrpg~i~  193 (248)
                                   .|+.+|+..+.+++.++.++   ++++++|+|+.+|
T Consensus       570 -------------~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~Pg~v~  605 (681)
T PRK08324        570 -------------AYGAAKAAELHLVRQLALELGPDGIRVNGVNPDAVV  605 (681)
T ss_pred             -------------HHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCceee
Confidence                         39999998888888877544   5999999999997

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.90  E-value=1.2e-22  Score=168.12  Aligned_cols=189  Identities=23%  Similarity=0.211  Sum_probs=141.5

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCC-CeEEEEEcCCCch-hhHHhh-hhc-------CCCCCeEEEEccCC------CHHH
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKG-YMVHGTVRDPCDE-KNAHLK-KLE-------GASENLQLFKTDLL------DYEA   70 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g-~~V~~~~r~~~~~-~~~~~~-~~~-------~~~~~~~~~~~Di~------d~~~   70 (248)
                      +++++||||||+|..++.+|+.+- .+|+++.|-.++. ....++ .+.       ...+++..+.+|+.      +...
T Consensus         1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~   80 (382)
T COG3320           1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT   80 (382)
T ss_pred             CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence            589999999999999999999865 5999999976522 112222 222       34578999999996      5677


Q ss_pred             HHHHhCCCCEEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCC
Q 025755           71 LCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWS  150 (248)
Q Consensus        71 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~  150 (248)
                      .+.+.+.+|.|||||+....   ..+..++...|+.|+..+++.|...+.|.+.||||++..............++.++ 
T Consensus        81 ~~~La~~vD~I~H~gA~Vn~---v~pYs~L~~~NVlGT~evlrLa~~gk~Kp~~yVSsisv~~~~~~~~~~~~~~~~~~-  156 (382)
T COG3320          81 WQELAENVDLIIHNAALVNH---VFPYSELRGANVLGTAEVLRLAATGKPKPLHYVSSISVGETEYYSNFTVDFDEISP-  156 (382)
T ss_pred             HHHHhhhcceEEecchhhcc---cCcHHHhcCcchHhHHHHHHHHhcCCCceeEEEeeeeeccccccCCCccccccccc-
Confidence            88888899999999997664   34557888999999999999999988889999999875443321111111111122 


Q ss_pred             chhhhccccchHHHHHHHHHHHHHHHHHhCCccEEEEccCeeecCCCCCC
Q 025755          151 DEEFCKATENYYCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPT  200 (248)
Q Consensus       151 ~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~  200 (248)
                      ....-..+.++|+.||+.+|.++++..+. |+|+.++|||+|-|+-....
T Consensus       157 ~~~~~~~~~~GY~~SKwvaE~Lvr~A~~r-GLpv~I~Rpg~I~gds~tG~  205 (382)
T COG3320         157 TRNVGQGLAGGYGRSKWVAEKLVREAGDR-GLPVTIFRPGYITGDSRTGA  205 (382)
T ss_pred             cccccCccCCCcchhHHHHHHHHHHHhhc-CCCeEEEecCeeeccCccCc
Confidence            12223344577999999999999999988 69999999999999876443

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.90  E-value=5.2e-23  Score=189.38  Aligned_cols=176  Identities=23%  Similarity=0.219  Sum_probs=130.1

Q ss_pred             cEEEEEcCccHHHHHHHHHHH--HCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCC------HHHHHHHhCCC
Q 025755            7 ERVCVTGAGGYIASWLVKYLL--LKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLD------YEALCAATAGC   78 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~--~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d------~~~~~~~~~~i   78 (248)
                      |+||||||||+||++++++|+  +.|++|++++|+............. ...++.++.+|++|      .+.++.+ +++
T Consensus         1 m~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~~~~l-~~~   78 (657)
T PRK07201          1 MRYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSLSRLEALAAYW-GADRVVPLVGDLTEPGLGLSEADIAEL-GDI   78 (657)
T ss_pred             CeEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchHHHHHHHHHhc-CCCcEEEEecccCCccCCcCHHHHHHh-cCC
Confidence            489999999999999999999  5799999999965321111111111 12578999999998      3456666 899


Q ss_pred             CEEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccc
Q 025755           79 TGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKAT  158 (248)
Q Consensus        79 d~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~  158 (248)
                      |+|||+||.....   .......++|+.++.++++++.+.+.+++||+||... ++..    ..+.+|+.+..+   ..+
T Consensus        79 D~Vih~Aa~~~~~---~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~~SS~~v-~g~~----~~~~~e~~~~~~---~~~  147 (657)
T PRK07201         79 DHVVHLAAIYDLT---ADEEAQRAANVDGTRNVVELAERLQAATFHHVSSIAV-AGDY----EGVFREDDFDEG---QGL  147 (657)
T ss_pred             CEEEECceeecCC---CCHHHHHHHHhHHHHHHHHHHHhcCCCeEEEEecccc-ccCc----cCccccccchhh---cCC
Confidence            9999999976432   2335678999999999999999998899999999764 4332    223444432211   123


Q ss_pred             cchHHHHHHHHHHHHHHHHHhCCccEEEEccCeeecCCCC
Q 025755          159 ENYYCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQ  198 (248)
Q Consensus       159 ~~~Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~  198 (248)
                      .+.|+.+|..+|.++.+   ..+++++++||+.+|||...
T Consensus       148 ~~~Y~~sK~~~E~~~~~---~~g~~~~ilRp~~v~G~~~~  184 (657)
T PRK07201        148 PTPYHRTKFEAEKLVRE---ECGLPWRVYRPAVVVGDSRT  184 (657)
T ss_pred             CCchHHHHHHHHHHHHH---cCCCcEEEEcCCeeeecCCC
Confidence            45699999999998874   34699999999999998643

>PRK05855 short chain dehydrogenase; Validated

Probab=99.90  E-value=4.3e-23  Score=187.15  Aligned_cols=173  Identities=17%  Similarity=0.139  Sum_probs=131.0

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-------
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-------   76 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-------   76 (248)
                      +.+++++||||+||||++++++|+++|++|++++|+... .....+.+.....++.++.+|++|.+++.++++       
T Consensus       313 ~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g  391 (582)
T PRK05855        313 FSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAA-AERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHG  391 (582)
T ss_pred             CCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence            567899999999999999999999999999999998642 222223333334578899999999999888775       


Q ss_pred             CCCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHHhc----C-CCEEEEEeccceeccCCCCCCCCccCCC
Q 025755           77 GCTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCVKA----K-VKRVVVVSSIGAVMLNPNWPKGQVMDEE  147 (248)
Q Consensus        77 ~id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~~~----~-~~~iV~vSS~~~~~~~~~~~~~~~~~e~  147 (248)
                      .+|+||||||.......    .+.+...+++|+.|+.++++++.+.    + .++||++||.+++.+.+....       
T Consensus       392 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~-------  464 (582)
T PRK05855        392 VPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPSRSLPA-------  464 (582)
T ss_pred             CCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCCCCCcH-------
Confidence            47999999998654322    2345678899999999888876543    3 379999999887665544333       


Q ss_pred             CCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCC
Q 025755          148 CWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQ  198 (248)
Q Consensus       148 ~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~  198 (248)
                                    |+.||++.+.+++.++.+   .||+|++|+||.+.+++..
T Consensus       465 --------------Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~  504 (582)
T PRK05855        465 --------------YATSKAAVLMLSECLRAELAAAGIGVTAICPGFVDTNIVA  504 (582)
T ss_pred             --------------HHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCCCcccchh
Confidence                          999998555554444432   3699999999999997644

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.90  E-value=6.1e-23  Score=188.95  Aligned_cols=175  Identities=18%  Similarity=0.159  Sum_probs=132.8

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC------
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA------   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~------   76 (248)
                      .+++|+++||||+||||+++++.|+++|++|++++|+.+. .....+.+.....++.++.+|++|.++++++++      
T Consensus       368 ~~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  446 (657)
T PRK07201        368 PLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEA-LDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEH  446 (657)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHH-HHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhc
Confidence            3678999999999999999999999999999999998642 223333333334578999999999999888776      


Q ss_pred             -CCCEEEEccccCCCCCC---C---CccccchhhhHHHHHHHHHHHH----hcCCCEEEEEeccceeccCCCCCCCCccC
Q 025755           77 -GCTGVFHVACPVPVGKV---P---NPEVQLIDPAVVGTKNVLNSCV----KAKVKRVVVVSSIGAVMLNPNWPKGQVMD  145 (248)
Q Consensus        77 -~id~vi~~ag~~~~~~~---~---~~~~~~~~~n~~g~~~~~~~~~----~~~~~~iV~vSS~~~~~~~~~~~~~~~~~  145 (248)
                       ++|++|||||.......   .   +++...+++|+.++.++++++.    +.+.++||++||..++.+.+....     
T Consensus       447 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~-----  521 (657)
T PRK07201        447 GHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQTNAPRFSA-----  521 (657)
T ss_pred             CCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCCcch-----
Confidence             58999999997532211   1   2356788999999888766654    456689999999876655543333     


Q ss_pred             CCCCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCC
Q 025755          146 EECWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQP  199 (248)
Q Consensus       146 e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~  199 (248)
                                      |+.||++.+.+++.++.+   .++++++|+||.+.+++..+
T Consensus       522 ----------------Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~~~~  562 (657)
T PRK07201        522 ----------------YVASKAALDAFSDVAASETLSDGITFTTIHMPLVRTPMIAP  562 (657)
T ss_pred             ----------------HHHHHHHHHHHHHHHHHHHHhhCCcEEEEECCcCcccccCc
Confidence                            999997666665555433   36999999999999987653

>PRK05599 hypothetical protein; Provisional

Probab=99.90  E-value=1e-22  Score=165.76  Aligned_cols=168  Identities=15%  Similarity=0.101  Sum_probs=120.5

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCC-CCeEEEEccCCCHHHHHHHhC-------CC
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGAS-ENLQLFKTDLLDYEALCAATA-------GC   78 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~Di~d~~~~~~~~~-------~i   78 (248)
                      |+++||||++|||++++++|+ +|++|++++|+.++ .+...+.+.... ..+.++.+|++|.++++++++       ++
T Consensus         1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~-~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   78 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEA-AQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEI   78 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHH-HHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCC
Confidence            579999999999999999998 59999999998643 223333333322 347889999999998887654       58


Q ss_pred             CEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHH----HHhcC-CCEEEEEeccceeccCCCCCCCCccCCCCC
Q 025755           79 TGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNS----CVKAK-VKRVVVVSSIGAVMLNPNWPKGQVMDEECW  149 (248)
Q Consensus        79 d~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~----~~~~~-~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~  149 (248)
                      |++|||||.......    ...+.+++++|+.+...+++.    +.+.+ .++||++||..+..+.+....         
T Consensus        79 d~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~~~---------  149 (246)
T PRK05599         79 SLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWRARRANYV---------  149 (246)
T ss_pred             CEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccccCCcCCcc---------
Confidence            999999997643211    122345677888887655544    44433 479999999876655544333         


Q ss_pred             CchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCC
Q 025755          150 SDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPML  197 (248)
Q Consensus       150 ~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~  197 (248)
                                  |+.||+..+.+.+.++.+   .+++|++++||.+.+++.
T Consensus       150 ------------Y~asKaa~~~~~~~la~el~~~~I~v~~v~PG~v~T~~~  188 (246)
T PRK05599        150 ------------YGSTKAGLDAFCQGLADSLHGSHVRLIIARPGFVIGSMT  188 (246)
T ss_pred             ------------hhhHHHHHHHHHHHHHHHhcCCCceEEEecCCcccchhh
Confidence                        999997555555544433   369999999999999864

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=99.90  E-value=7.7e-23  Score=165.49  Aligned_cols=175  Identities=19%  Similarity=0.139  Sum_probs=147.6

Q ss_pred             EEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC--CCCEEEEcc
Q 025755            8 RVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA--GCTGVFHVA   85 (248)
Q Consensus         8 ~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~--~id~vi~~a   85 (248)
                      ++||||++|.+|.++++.|. .+++|+.++|..                      +|++|.+.+.+++.  ++|+|||+|
T Consensus         2 ~iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~----------------------~Ditd~~~v~~~i~~~~PDvVIn~A   58 (281)
T COG1091           2 KILITGANGQLGTELRRALP-GEFEVIATDRAE----------------------LDITDPDAVLEVIRETRPDVVINAA   58 (281)
T ss_pred             cEEEEcCCChHHHHHHHHhC-CCceEEeccCcc----------------------ccccChHHHHHHHHhhCCCEEEECc
Confidence            39999999999999999998 679999887753                      89999999999998  479999999


Q ss_pred             ccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccccchHHHH
Q 025755           86 CPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLA  165 (248)
Q Consensus        86 g~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~s  165 (248)
                      +.......+.+....+.+|..|+.+++++|.+.|. ++||+||...+-|..    +.++.|+++.+|.      +.||.|
T Consensus        59 Ayt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~ga-~lVhiSTDyVFDG~~----~~~Y~E~D~~~P~------nvYG~s  127 (281)
T COG1091          59 AYTAVDKAESEPELAFAVNATGAENLARAAAEVGA-RLVHISTDYVFDGEK----GGPYKETDTPNPL------NVYGRS  127 (281)
T ss_pred             cccccccccCCHHHHHHhHHHHHHHHHHHHHHhCC-eEEEeecceEecCCC----CCCCCCCCCCCCh------hhhhHH
Confidence            99888877777788999999999999999999986 999999987766653    5788999888774      559999


Q ss_pred             HHHHHHHHHHHHHhCCccEEEEccCeeecCCCCCCCCccHHHHHHHHcCCCCCCCCCc
Q 025755          166 KTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKGFFFTTPSHS  223 (248)
Q Consensus       166 K~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  223 (248)
                      |.++|..+..+.+++    .++|.+++||....   ++...+++....++.+....+.
T Consensus       128 Kl~GE~~v~~~~~~~----~I~Rtswv~g~~g~---nFv~tml~la~~~~~l~vv~Dq  178 (281)
T COG1091         128 KLAGEEAVRAAGPRH----LILRTSWVYGEYGN---NFVKTMLRLAKEGKELKVVDDQ  178 (281)
T ss_pred             HHHHHHHHHHhCCCE----EEEEeeeeecCCCC---CHHHHHHHHhhcCCceEEECCe
Confidence            999999998876544    99999999998652   4666777777777755544443

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=99.90  E-value=1.6e-22  Score=170.25  Aligned_cols=193  Identities=15%  Similarity=0.079  Sum_probs=129.3

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCC-CeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-------
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKG-YMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-------   76 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-------   76 (248)
                      ++|+++||||++|||+++++.|+++| ++|++++|+... .....+.+.....++.++.+|++|.++++++++       
T Consensus         2 ~~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~-~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   80 (314)
T TIGR01289         2 QKPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLK-AEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGR   80 (314)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHH-HHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence            47899999999999999999999999 999999998642 222333333234567889999999998887764       


Q ss_pred             CCCEEEEccccCCCC-----CCCCccccchhhhHHHHHHHHHHHHh----cC--CCEEEEEeccceeccCCCCCCCCccC
Q 025755           77 GCTGVFHVACPVPVG-----KVPNPEVQLIDPAVVGTKNVLNSCVK----AK--VKRVVVVSSIGAVMLNPNWPKGQVMD  145 (248)
Q Consensus        77 ~id~vi~~ag~~~~~-----~~~~~~~~~~~~n~~g~~~~~~~~~~----~~--~~~iV~vSS~~~~~~~~~~~~~~~~~  145 (248)
                      ++|++|||||+....     ...+.+...+++|+.++..+++.+.+    .+  .++||++||..+...........+.+
T Consensus        81 ~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~  160 (314)
T TIGR01289        81 PLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNTNTLAGNVPPKAN  160 (314)
T ss_pred             CCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccccccCCCcCCCccc
Confidence            589999999975421     11234567899999998877666554    32  47999999977543210000000000


Q ss_pred             CCC------------CCchhhhccccchHHHHHHHHHHHHHHHHHh----CCccEEEEccCeee-cCCCC
Q 025755          146 EEC------------WSDEEFCKATENYYCLAKTIAEIQALEYAKR----GELDIVTVCPSIVI-GPMLQ  198 (248)
Q Consensus       146 e~~------------~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~----~~i~v~~vrpg~i~-g~~~~  198 (248)
                      ..+            +........+...|+.||++...++++++.+    .++++++|+||.+. +++..
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~T~l~~  230 (314)
T TIGR01289       161 LGDLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIADTGLFR  230 (314)
T ss_pred             ccccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCcccCCcccc
Confidence            000            0000111233456999998766666666543    36999999999995 77654

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK07832 short chain dehydrogenase; Provisional

Probab=99.90  E-value=9.7e-23  Score=168.28  Aligned_cols=169  Identities=22%  Similarity=0.271  Sum_probs=124.9

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCC-CeEEEEccCCCHHHHHHHhC-------CC
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASE-NLQLFKTDLLDYEALCAATA-------GC   78 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~Di~d~~~~~~~~~-------~i   78 (248)
                      |+++||||+|+||+++++.|+++|++|++++|+.+. .....+.+..... ...++.+|++|.+++.++++       ++
T Consensus         1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   79 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADG-LAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSM   79 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence            589999999999999999999999999999987632 2222333332222 34567899999998877665       47


Q ss_pred             CEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHHhc-----CCCEEEEEeccceeccCCCCCCCCccCCCCC
Q 025755           79 TGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCVKA-----KVKRVVVVSSIGAVMLNPNWPKGQVMDEECW  149 (248)
Q Consensus        79 d~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~~~-----~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~  149 (248)
                      |+||||||.......    .+.+...+++|+.++.++++++.+.     ..++||++||..+..+.+....         
T Consensus        80 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~~~~---------  150 (272)
T PRK07832         80 DVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVALPWHAA---------  150 (272)
T ss_pred             CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccCCCCCCcc---------
Confidence            999999997643322    2334678899999999999987542     2479999999776555443333         


Q ss_pred             CchhhhccccchHHHHHH----HHHHHHHHHHHhCCccEEEEccCeeecCCCC
Q 025755          150 SDEEFCKATENYYCLAKT----IAEIQALEYAKRGELDIVTVCPSIVIGPMLQ  198 (248)
Q Consensus       150 ~~~~~~~~~~~~Y~~sK~----~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~  198 (248)
                                  |+.+|+    +.+.+..++.+ .++++++++||.+.+++..
T Consensus       151 ------------Y~~sK~a~~~~~~~l~~e~~~-~~i~v~~v~Pg~v~t~~~~  190 (272)
T PRK07832        151 ------------YSASKFGLRGLSEVLRFDLAR-HGIGVSVVVPGAVKTPLVN  190 (272)
T ss_pred             ------------hHHHHHHHHHHHHHHHHHhhh-cCcEEEEEecCcccCcchh
Confidence                        999997    45555555544 4699999999999998643

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=99.90  E-value=3.6e-23  Score=159.34  Aligned_cols=168  Identities=23%  Similarity=0.180  Sum_probs=134.2

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcC--CCCCeEEEEccCCCHHHHHHHhCC---
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEG--ASENLQLFKTDLLDYEALCAATAG---   77 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~Di~d~~~~~~~~~~---   77 (248)
                      +++||++++||+.||||+.+++.|+++|..+.++..+.++.  +...++..  ....+.|+++|+++..++++++++   
T Consensus         2 ~~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~--~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~   79 (261)
T KOG4169|consen    2 DLTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENP--EAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILA   79 (261)
T ss_pred             cccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCH--HHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHH
Confidence            47899999999999999999999999999988887776542  22233333  246788999999999999998874   


Q ss_pred             ----CCEEEEccccCCCCCCCCccccchhhhHHH----HHHHHHHHHhc---CCCEEEEEeccceeccCCCCCCCCccCC
Q 025755           78 ----CTGVFHVACPVPVGKVPNPEVQLIDPAVVG----TKNVLNSCVKA---KVKRVVVVSSIGAVMLNPNWPKGQVMDE  146 (248)
Q Consensus        78 ----id~vi~~ag~~~~~~~~~~~~~~~~~n~~g----~~~~~~~~~~~---~~~~iV~vSS~~~~~~~~~~~~~~~~~e  146 (248)
                          +|++||+||+...    .+|+.++.+|+.|    +...++++.+.   ..+-||++||..++++.+.++.      
T Consensus        80 ~fg~iDIlINgAGi~~d----kd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~P~p~~pV------  149 (261)
T KOG4169|consen   80 TFGTIDILINGAGILDD----KDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLDPMPVFPV------  149 (261)
T ss_pred             HhCceEEEEcccccccc----hhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccCccccchh------
Confidence                7999999999874    5578899999877    56778888665   2468999999999998876665      


Q ss_pred             CCCCchhhhccccchHHHHHH----HHHHHHHHHH-HhCCccEEEEccCeeecCCC
Q 025755          147 ECWSDEEFCKATENYYCLAKT----IAEIQALEYA-KRGELDIVTVCPSIVIGPML  197 (248)
Q Consensus       147 ~~~~~~~~~~~~~~~Y~~sK~----~~e~l~~~~~-~~~~i~v~~vrpg~i~g~~~  197 (248)
                                     |+.||+    +++.++.... .+.|++++++|||.+-+.+.
T Consensus       150 ---------------Y~AsKaGVvgFTRSla~~ayy~~sGV~~~avCPG~t~t~l~  190 (261)
T KOG4169|consen  150 ---------------YAASKAGVVGFTRSLADLAYYQRSGVRFNAVCPGFTRTDLA  190 (261)
T ss_pred             ---------------hhhcccceeeeehhhhhhhhHhhcCEEEEEECCCcchHHHH
Confidence                           999995    7777664433 44579999999999988643

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.90  E-value=3e-22  Score=160.81  Aligned_cols=171  Identities=18%  Similarity=0.139  Sum_probs=126.5

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-----CCCE
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-----GCTG   80 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-----~id~   80 (248)
                      ||+++||||+|+||++++++|+++|++|++++|+..+..  ....    ..++.++.+|++|.++++++++     ++|+
T Consensus         1 ~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~--~~~~----~~~~~~~~~D~~d~~~~~~~~~~~~~~~id~   74 (225)
T PRK08177          1 KRTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDT--ALQA----LPGVHIEKLDMNDPASLDQLLQRLQGQRFDL   74 (225)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchH--HHHh----ccccceEEcCCCCHHHHHHHHHHhhcCCCCE
Confidence            479999999999999999999999999999999875321  1222    2357788999999998888776     4899


Q ss_pred             EEEccccCCCCC------CCCccccchhhhHHHHHHHHHHHHhc---CCCEEEEEeccceeccCCCCCCCCccCCCCCCc
Q 025755           81 VFHVACPVPVGK------VPNPEVQLIDPAVVGTKNVLNSCVKA---KVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSD  151 (248)
Q Consensus        81 vi~~ag~~~~~~------~~~~~~~~~~~n~~g~~~~~~~~~~~---~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~  151 (248)
                      ||||||......      ..+++...+++|+.++..+++++.+.   +.+.++++||..+..+.+...            
T Consensus        75 vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~ss~~g~~~~~~~~------------  142 (225)
T PRK08177         75 LFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPGQGVLAFMSSQLGSVELPDGG------------  142 (225)
T ss_pred             EEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhcCCEEEEEccCccccccCCCC------------
Confidence            999999864321      12334567899999999998888654   336899998854332211000            


Q ss_pred             hhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCC
Q 025755          152 EEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPT  200 (248)
Q Consensus       152 ~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~  200 (248)
                            ....|+.+|++.+.+++.++.+   .++++++|+||.+.+++....
T Consensus       143 ------~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~i~PG~i~t~~~~~~  188 (225)
T PRK08177        143 ------EMPLYKASKAALNSMTRSFVAELGEPTLTVLSMHPGWVKTDMGGDN  188 (225)
T ss_pred             ------CccchHHHHHHHHHHHHHHHHHhhcCCeEEEEEcCCceecCCCCCC
Confidence                  0123999998888777777654   369999999999999975543

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=99.90  E-value=4.7e-22  Score=160.59  Aligned_cols=202  Identities=12%  Similarity=0.062  Sum_probs=136.3

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCC--CeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC---CCCEE
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKG--YMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA---GCTGV   81 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~---~id~v   81 (248)
                      |+++||||+||||++++++|+++|  +.|+...|+....       .  ...++.++++|++|.++++++.+   ++|+|
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~-------~--~~~~~~~~~~Dls~~~~~~~~~~~~~~id~l   71 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD-------F--QHDNVQWHALDVTDEAEIKQLSEQFTQLDWL   71 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc-------c--ccCceEEEEecCCCHHHHHHHHHhcCCCCEE
Confidence            489999999999999999999985  5666666654211       1  13578899999999998777544   68999


Q ss_pred             EEccccCCCCC------C----CCccccchhhhHHHHHHHHHHHHhc----CCCEEEEEeccceeccCCCCCCCCccCCC
Q 025755           82 FHVACPVPVGK------V----PNPEVQLIDPAVVGTKNVLNSCVKA----KVKRVVVVSSIGAVMLNPNWPKGQVMDEE  147 (248)
Q Consensus        82 i~~ag~~~~~~------~----~~~~~~~~~~n~~g~~~~~~~~~~~----~~~~iV~vSS~~~~~~~~~~~~~~~~~e~  147 (248)
                      |||||......      .    .+.+...+++|+.++..+.+.+.+.    +.++++++||..+.......+        
T Consensus        72 i~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~~~~~~~~~~--------  143 (235)
T PRK09009         72 INCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKVGSISDNRLG--------  143 (235)
T ss_pred             EECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeecccccccCCCC--------
Confidence            99999864321      0    1224567899999988887777653    457899998744321110000        


Q ss_pred             CCCchhhhccccchHHHHHHHHHHHHHHHHHh-----CCccEEEEccCeeecCCCCCCC-------CccHHHHHHHHcCC
Q 025755          148 CWSDEEFCKATENYYCLAKTIAEIQALEYAKR-----GELDIVTVCPSIVIGPMLQPTI-------NTSSLLLLGFLKGF  215 (248)
Q Consensus       148 ~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~-----~~i~v~~vrpg~i~g~~~~~~~-------~~~~~~~~~~~~~~  215 (248)
                                ....|+.+|+..+.+.+.++.+     .+++|++|+||.+.+++.....       ...+....+...  
T Consensus       144 ----------~~~~Y~asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~a~~~~--  211 (235)
T PRK09009        144 ----------GWYSYRASKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALSKPFQQNVPKGKLFTPEYVAQCLL--  211 (235)
T ss_pred             ----------CcchhhhhHHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCCCcchhhccccCCCCCHHHHHHHHH--
Confidence                      0123999998666666555532     3699999999999998754210       011222222221  


Q ss_pred             CCCCCCCchhhhhhhhhcccee
Q 025755          216 FFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       216 ~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                      ++......+.+|+.+.+||++.
T Consensus       212 ~l~~~~~~~~~g~~~~~~g~~~  233 (235)
T PRK09009        212 GIIANATPAQSGSFLAYDGETL  233 (235)
T ss_pred             HHHHcCChhhCCcEEeeCCcCC
Confidence            4455566788999999999874

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.90  E-value=4.6e-22  Score=175.29  Aligned_cols=172  Identities=22%  Similarity=0.198  Sum_probs=125.7

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhc-------C--CCCCeEEEEccCCCHHHHHHH
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLE-------G--ASENLQLFKTDLLDYEALCAA   74 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-------~--~~~~~~~~~~Di~d~~~~~~~   74 (248)
                      .++|+|+||||+|+||++++++|+++|++|++++|+..... .....+.       .  ...++.++.+|+.|.+++.++
T Consensus        78 ~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~-~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~a  156 (576)
T PLN03209         78 KDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAE-SLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPA  156 (576)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHH-HHHHHhhhhccccccccccCceEEEEecCCCHHHHHHH
Confidence            46799999999999999999999999999999999874322 1111111       0  123588999999999999999


Q ss_pred             hCCCCEEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceec-cCCCCCCCCccCCCCCCchh
Q 025755           75 TAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVM-LNPNWPKGQVMDEECWSDEE  153 (248)
Q Consensus        75 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~-~~~~~~~~~~~~e~~~~~~~  153 (248)
                      +.++|+||||+|.....  ...+...+++|+.|+.++++++.+.++++||++||.++.. +.+.         . ..   
T Consensus       157 LggiDiVVn~AG~~~~~--v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSiga~~~g~p~---------~-~~---  221 (576)
T PLN03209        157 LGNASVVICCIGASEKE--VFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLGTNKVGFPA---------A-IL---  221 (576)
T ss_pred             hcCCCEEEEcccccccc--ccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccchhcccCccc---------c-ch---
Confidence            99999999999875321  1234567899999999999999999999999999976421 1110         0 00   


Q ss_pred             hhccccchHHHHHHHHHHHHHHHHHhCCccEEEEccCeeecCCCC
Q 025755          154 FCKATENYYCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQ  198 (248)
Q Consensus       154 ~~~~~~~~Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~  198 (248)
                         .....|...|..+|..+.    +.|+++++||||+++++++.
T Consensus       222 ---~sk~~~~~~KraaE~~L~----~sGIrvTIVRPG~L~tp~d~  259 (576)
T PLN03209        222 ---NLFWGVLCWKRKAEEALI----ASGLPYTIVRPGGMERPTDA  259 (576)
T ss_pred             ---hhHHHHHHHHHHHHHHHH----HcCCCEEEEECCeecCCccc
Confidence               011225555655554433    35699999999999987543

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=99.89  E-value=1.2e-22  Score=166.25  Aligned_cols=168  Identities=16%  Similarity=0.121  Sum_probs=123.7

Q ss_pred             EEEEEcCccHHHHHHHHHHHH----CCCeEEEEEcCCCchhhHHhhhhcC--CCCCeEEEEccCCCHHHHHHHhCC----
Q 025755            8 RVCVTGAGGYIASWLVKYLLL----KGYMVHGTVRDPCDEKNAHLKKLEG--ASENLQLFKTDLLDYEALCAATAG----   77 (248)
Q Consensus         8 ~vlVtG~~g~iG~~~~~~l~~----~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~Di~d~~~~~~~~~~----   77 (248)
                      +++||||++|||++++++|++    +|++|++++|+.... ....+.+..  ...++.++.+|++|.++++++++.    
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~-~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~   80 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEAL-RQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALREL   80 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHH-HHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhc
Confidence            689999999999999999997    799999999986432 222233332  234688899999999988887642    


Q ss_pred             -------CCEEEEccccCCCC-C-C-----CCccccchhhhHHHHHHHHHHHHhc-----C-CCEEEEEeccceeccCCC
Q 025755           78 -------CTGVFHVACPVPVG-K-V-----PNPEVQLIDPAVVGTKNVLNSCVKA-----K-VKRVVVVSSIGAVMLNPN  137 (248)
Q Consensus        78 -------id~vi~~ag~~~~~-~-~-----~~~~~~~~~~n~~g~~~~~~~~~~~-----~-~~~iV~vSS~~~~~~~~~  137 (248)
                             .|+||||||..... . .     .+.+..++++|+.++..+.+.+.+.     + .++||++||..+..+.+.
T Consensus        81 ~g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~~~~~  160 (256)
T TIGR01500        81 PRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQPFKG  160 (256)
T ss_pred             cccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCCCCCC
Confidence                   25899999975321 1 1     1344678999999988777766543     1 368999999876655543


Q ss_pred             CCCCCccCCCCCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCC
Q 025755          138 WPKGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPML  197 (248)
Q Consensus       138 ~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~  197 (248)
                      ..                     .|+.||++.+.+++.++.+   .+++|++++||++.+++.
T Consensus       161 ~~---------------------~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~~~  202 (256)
T TIGR01500       161 WA---------------------LYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTDMQ  202 (256)
T ss_pred             ch---------------------HHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccchHH
Confidence            33                     3999998666666665543   369999999999999864

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>CHL00194 ycf39 Ycf39; Provisional

Probab=99.89  E-value=1.5e-22  Score=170.76  Aligned_cols=150  Identities=21%  Similarity=0.173  Sum_probs=119.1

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEEccc
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFHVAC   86 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~~ag   86 (248)
                      |+|+||||||+||++++++|+++|++|++++|+....  ....     ..+++++.+|++|++++.++++++|+|||+++
T Consensus         1 MkIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~--~~l~-----~~~v~~v~~Dl~d~~~l~~al~g~d~Vi~~~~   73 (317)
T CHL00194          1 MSLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKA--SFLK-----EWGAELVYGDLSLPETLPPSFKGVTAIIDAST   73 (317)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHh--hhHh-----hcCCEEEECCCCCHHHHHHHHCCCCEEEECCC
Confidence            4899999999999999999999999999999985321  1111     23688999999999999999999999999876


Q ss_pred             cCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccccchHHHHH
Q 025755           87 PVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAK  166 (248)
Q Consensus        87 ~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK  166 (248)
                      ...     .....++++|+.++.+++++|++.+++++|++||.... ..+                      ..+|..+|
T Consensus        74 ~~~-----~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~~~~-~~~----------------------~~~~~~~K  125 (317)
T CHL00194         74 SRP-----SDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSILNAE-QYP----------------------YIPLMKLK  125 (317)
T ss_pred             CCC-----CCccchhhhhHHHHHHHHHHHHHcCCCEEEEecccccc-ccC----------------------CChHHHHH
Confidence            321     22356788999999999999999999999999985321 110                      01288899


Q ss_pred             HHHHHHHHHHHHhCCccEEEEccCeeecC
Q 025755          167 TIAEIQALEYAKRGELDIVTVCPSIVIGP  195 (248)
Q Consensus       167 ~~~e~l~~~~~~~~~i~v~~vrpg~i~g~  195 (248)
                      ..+|..++    +.+++++++||+.+|+.
T Consensus       126 ~~~e~~l~----~~~l~~tilRp~~~~~~  150 (317)
T CHL00194        126 SDIEQKLK----KSGIPYTIFRLAGFFQG  150 (317)
T ss_pred             HHHHHHHH----HcCCCeEEEeecHHhhh
Confidence            88887664    35699999999988754

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.89  E-value=1e-21  Score=157.41  Aligned_cols=169  Identities=16%  Similarity=0.092  Sum_probs=129.1

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-----CCCE
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-----GCTG   80 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-----~id~   80 (248)
                      ||+++||||+|+||+++++.|+++|++|++++|+.+..  ..+.   .  ..+.++.+|++|.++++++++     ++|+
T Consensus         1 ~~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~--~~~~---~--~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~   73 (222)
T PRK06953          1 MKTVLIVGASRGIGREFVRQYRADGWRVIATARDAAAL--AALQ---A--LGAEALALDVADPASVAGLAWKLDGEALDA   73 (222)
T ss_pred             CceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHH--HHHH---h--ccceEEEecCCCHHHHHHHHHHhcCCCCCE
Confidence            47999999999999999999999999999999876321  1111   1  235688999999999888642     4899


Q ss_pred             EEEccccCCCCC------CCCccccchhhhHHHHHHHHHHHHhc---CCCEEEEEeccceeccCCCCCCCCccCCCCCCc
Q 025755           81 VFHVACPVPVGK------VPNPEVQLIDPAVVGTKNVLNSCVKA---KVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSD  151 (248)
Q Consensus        81 vi~~ag~~~~~~------~~~~~~~~~~~n~~g~~~~~~~~~~~---~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~  151 (248)
                      |||++|......      ..++++..+++|+.++.++++++.+.   ..+++|++||..+.++......           
T Consensus        74 vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~-----------  142 (222)
T PRK06953         74 AVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSSRMGSIGDATGTT-----------  142 (222)
T ss_pred             EEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcCcccccccccCCC-----------
Confidence            999999763221      22345678999999999999998763   3468999999766554321100           


Q ss_pred             hhhhccccchHHHHHHHHHHHHHHHHHhC-CccEEEEccCeeecCCCCC
Q 025755          152 EEFCKATENYYCLAKTIAEIQALEYAKRG-ELDIVTVCPSIVIGPMLQP  199 (248)
Q Consensus       152 ~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~-~i~v~~vrpg~i~g~~~~~  199 (248)
                             ...|+.+|...+.+++.++.++ ++++++++||++.+++...
T Consensus       143 -------~~~Y~~sK~a~~~~~~~~~~~~~~i~v~~v~Pg~i~t~~~~~  184 (222)
T PRK06953        143 -------GWLYRASKAALNDALRAASLQARHATCIALHPGWVRTDMGGA  184 (222)
T ss_pred             -------ccccHHhHHHHHHHHHHHhhhccCcEEEEECCCeeecCCCCC
Confidence                   1139999999999988887654 7999999999999997553

>PLN00015 protochlorophyllide reductase

Probab=99.89  E-value=4.3e-22  Score=167.30  Aligned_cols=225  Identities=14%  Similarity=0.068  Sum_probs=137.9

Q ss_pred             EEEcCccHHHHHHHHHHHHCC-CeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-------CCCEE
Q 025755           10 CVTGAGGYIASWLVKYLLLKG-YMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-------GCTGV   81 (248)
Q Consensus        10 lVtG~~g~iG~~~~~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-------~id~v   81 (248)
                      +||||++|||++++++|+++| ++|++++|+... .......+.....++.++.+|++|.++++++++       .+|++
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~-~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~l   79 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACRDFLK-AERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVL   79 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHH-HHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEE
Confidence            699999999999999999999 999999987642 222233333234568889999999999887764       47999


Q ss_pred             EEccccCCCC-----CCCCccccchhhhHHHHHHHHHHHHh----cC--CCEEEEEeccceeccCCC--CCCCC------
Q 025755           82 FHVACPVPVG-----KVPNPEVQLIDPAVVGTKNVLNSCVK----AK--VKRVVVVSSIGAVMLNPN--WPKGQ------  142 (248)
Q Consensus        82 i~~ag~~~~~-----~~~~~~~~~~~~n~~g~~~~~~~~~~----~~--~~~iV~vSS~~~~~~~~~--~~~~~------  142 (248)
                      |||||.....     ...+.++..+++|+.|+..+++.+.+    .+  .++||++||..+..+...  ..+..      
T Consensus        80 InnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~~~  159 (308)
T PLN00015         80 VCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLR  159 (308)
T ss_pred             EECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccCCCccchhhhh
Confidence            9999975321     11234567899999998777666544    33  479999999765432100  00000      


Q ss_pred             ----ccCCCCC---CchhhhccccchHHHHHHHHHHHHHHHHHh----CCccEEEEccCee-ecCCCCCCCCccHHH---
Q 025755          143 ----VMDEECW---SDEEFCKATENYYCLAKTIAEIQALEYAKR----GELDIVTVCPSIV-IGPMLQPTINTSSLL---  207 (248)
Q Consensus       143 ----~~~e~~~---~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~----~~i~v~~vrpg~i-~g~~~~~~~~~~~~~---  207 (248)
                          +..+...   ... ........|+.||++...+++.++.+    .++++++++||++ .+++...........   
T Consensus       160 ~~~~~~~~~~~~~~~~~-~~~~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~~~~~~~~~~~~  238 (308)
T PLN00015        160 GLAGGLNGLNSSAMIDG-GEFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGLFREHIPLFRLLFPP  238 (308)
T ss_pred             hhhcccCCccchhhccc-cCCcHHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCccccccccHHHHHHHHH
Confidence                0000000   000 01122456999998644444444432    3699999999999 466643211100000   


Q ss_pred             HHHHHcCC------------CCCCCCCchhhhhhhhhccce
Q 025755          208 LLGFLKGF------------FFTTPSHSYMLERTLVLNQGV  236 (248)
Q Consensus       208 ~~~~~~~~------------~l~~~~~~~~~g~~l~vd~g~  236 (248)
                      +.....+.            ++......+.+|+.+..||+.
T Consensus       239 ~~~~~~~~~~~pe~~a~~~~~l~~~~~~~~~G~~~~~~g~~  279 (308)
T PLN00015        239 FQKYITKGYVSEEEAGKRLAQVVSDPSLTKSGVYWSWNGGS  279 (308)
T ss_pred             HHHHHhcccccHHHhhhhhhhhccccccCCCccccccCCcc
Confidence            11111110            445555567888888777763

>PRK07578 short chain dehydrogenase; Provisional

Probab=99.89  E-value=4.1e-22  Score=157.05  Aligned_cols=151  Identities=17%  Similarity=0.072  Sum_probs=119.1

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC---CCCEEEE
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA---GCTGVFH   83 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~---~id~vi~   83 (248)
                      |+++||||+|+||+++++.|+++ ++|++++|+..                  .+++|++|.++++++++   ++|+|||
T Consensus         1 ~~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~------------------~~~~D~~~~~~~~~~~~~~~~id~lv~   61 (199)
T PRK07578          1 MKILVIGASGTIGRAVVAELSKR-HEVITAGRSSG------------------DVQVDITDPASIRALFEKVGKVDAVVS   61 (199)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC------------------ceEecCCChHHHHHHHHhcCCCCEEEE
Confidence            37999999999999999999999 99999988742                  36799999999988876   6899999


Q ss_pred             ccccCCCCCC----CCccccchhhhHHHHHHHHHHHHhc--CCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhcc
Q 025755           84 VACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCVKA--KVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKA  157 (248)
Q Consensus        84 ~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~~~--~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~  157 (248)
                      |||.......    .+.+...+++|+.++.++++++.+.  +.++|+++||..+..+.+...                  
T Consensus        62 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~~~~~~~~~~------------------  123 (199)
T PRK07578         62 AAGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGILSDEPIPGGA------------------  123 (199)
T ss_pred             CCCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcccccCCCCCCch------------------
Confidence            9997543321    2345677899999999999988764  447899999977655544333                  


Q ss_pred             ccchHHHHHHHHHHHHHHHHHh--CCccEEEEccCeeecCCC
Q 025755          158 TENYYCLAKTIAEIQALEYAKR--GELDIVTVCPSIVIGPML  197 (248)
Q Consensus       158 ~~~~Y~~sK~~~e~l~~~~~~~--~~i~v~~vrpg~i~g~~~  197 (248)
                         .|+.+|+..+.+++.++.+  .++++++|+||.+.+++.
T Consensus       124 ---~Y~~sK~a~~~~~~~la~e~~~gi~v~~i~Pg~v~t~~~  162 (199)
T PRK07578        124 ---SAATVNGALEGFVKAAALELPRGIRINVVSPTVLTESLE  162 (199)
T ss_pred             ---HHHHHHHHHHHHHHHHHHHccCCeEEEEEcCCcccCchh
Confidence               3999997666665555543  469999999999988753

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.89  E-value=6.6e-22  Score=158.68  Aligned_cols=165  Identities=20%  Similarity=0.170  Sum_probs=123.2

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC---CCCEE
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA---GCTGV   81 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~---~id~v   81 (248)
                      ++|+++||||+|+||+++++.|+++ ++|++++|+..+. ....+.    ...+.++++|++|.+++.++++   ++|+|
T Consensus         2 ~~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~-~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~id~v   75 (227)
T PRK08219          2 ERPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERL-DELAAE----LPGATPFPVDLTDPEAIAAAVEQLGRLDVL   75 (227)
T ss_pred             CCCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHH-HHHHHH----hccceEEecCCCCHHHHHHHHHhcCCCCEE
Confidence            3689999999999999999999999 9999999986321 111111    2357889999999999999887   58999


Q ss_pred             EEccccCCCCCCC----CccccchhhhHHHHHHHHHHH----HhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCchh
Q 025755           82 FHVACPVPVGKVP----NPEVQLIDPAVVGTKNVLNSC----VKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEE  153 (248)
Q Consensus        82 i~~ag~~~~~~~~----~~~~~~~~~n~~g~~~~~~~~----~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~  153 (248)
                      ||++|........    +.+...+++|+.+..++.+.+    ++. .+++|++||..++.+.+...              
T Consensus        76 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~v~~ss~~~~~~~~~~~--------------  140 (227)
T PRK08219         76 VHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAA-HGHVVFINSGAGLRANPGWG--------------  140 (227)
T ss_pred             EECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCeEEEEcchHhcCcCCCCc--------------
Confidence            9999976543211    234556889999865555544    443 47999999977665543322              


Q ss_pred             hhccccchHHHHHHHHHHHHHHHHHhC-C-ccEEEEccCeeecCCC
Q 025755          154 FCKATENYYCLAKTIAEIQALEYAKRG-E-LDIVTVCPSIVIGPML  197 (248)
Q Consensus       154 ~~~~~~~~Y~~sK~~~e~l~~~~~~~~-~-i~v~~vrpg~i~g~~~  197 (248)
                             .|+.+|...+.++..++.+. + +++++++||.+.++..
T Consensus       141 -------~y~~~K~a~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~  179 (227)
T PRK08219        141 -------SYAASKFALRALADALREEEPGNVRVTSVHPGRTDTDMQ  179 (227)
T ss_pred             -------hHHHHHHHHHHHHHHHHHHhcCCceEEEEecCCccchHh
Confidence                   39999998888888876542 4 8999999999877643

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.89  E-value=1.5e-21  Score=162.42  Aligned_cols=186  Identities=18%  Similarity=0.110  Sum_probs=135.7

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhc--CCCCCeEEEEccCCCHHHHHHHhC----
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLE--GASENLQLFKTDLLDYEALCAATA----   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~~Di~d~~~~~~~~~----   76 (248)
                      ++.+++++|||+++|||++++++|+++|++|++.+|+... .....+.+.  ....++.++++|+.|..+++++.+    
T Consensus        32 ~~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~-~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~  110 (314)
T KOG1208|consen   32 DLSGKVALVTGATSGIGFETARELALRGAHVVLACRNEER-GEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKK  110 (314)
T ss_pred             cCCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHH-HHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHh
Confidence            3678999999999999999999999999999999999743 333333333  345678899999999999999875    


Q ss_pred             ---CCCEEEEccccCCCCCC--CCccccchhhhHHHHHHHHHHHHhc----CCCEEEEEeccceeccCCCCCCCCccCCC
Q 025755           77 ---GCTGVFHVACPVPVGKV--PNPEVQLIDPAVVGTKNVLNSCVKA----KVKRVVVVSSIGAVMLNPNWPKGQVMDEE  147 (248)
Q Consensus        77 ---~id~vi~~ag~~~~~~~--~~~~~~~~~~n~~g~~~~~~~~~~~----~~~~iV~vSS~~~~~~~~~~~~~~~~~e~  147 (248)
                         ..|++|||||+......  .+..+..+.+|+.|...+.+.+.+.    ...|||++||... ....+        -+
T Consensus       111 ~~~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~-~~~~~--------~~  181 (314)
T KOG1208|consen  111 KEGPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILG-GGKID--------LK  181 (314)
T ss_pred             cCCCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccc-cCccc--------hh
Confidence               47999999998765532  3456789999999988777776543    3379999999765 11111        11


Q ss_pred             CCCchhhh-ccccchHHHHHHHHHHHHHHHHHhC--CccEEEEccCeeecC-CCC
Q 025755          148 CWSDEEFC-KATENYYCLAKTIAEIQALEYAKRG--ELDIVTVCPSIVIGP-MLQ  198 (248)
Q Consensus       148 ~~~~~~~~-~~~~~~Y~~sK~~~e~l~~~~~~~~--~i~v~~vrpg~i~g~-~~~  198 (248)
                      +...+... ......|+.||.+-...+.+++++.  |+.++.++||.+.++ ..+
T Consensus       182 ~l~~~~~~~~~~~~~Y~~SKla~~l~~~eL~k~l~~~V~~~~~hPG~v~t~~l~r  236 (314)
T KOG1208|consen  182 DLSGEKAKLYSSDAAYALSKLANVLLANELAKRLKKGVTTYSVHPGVVKTTGLSR  236 (314)
T ss_pred             hccchhccCccchhHHHHhHHHHHHHHHHHHHHhhcCceEEEECCCcccccceec
Confidence            11111111 1222349999976666666666654  599999999999998 444

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=99.88  E-value=8.4e-22  Score=149.53  Aligned_cols=166  Identities=16%  Similarity=0.140  Sum_probs=127.5

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-------
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-------   76 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-------   76 (248)
                      +.|.+||||||++|||.+++++|.+.|-+|++++|+...     +++.....+.+..+.||+.|.++.+.+.+       
T Consensus         3 ~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~-----L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P   77 (245)
T COG3967           3 TTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEER-----LAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYP   77 (245)
T ss_pred             ccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHH-----HHHHHhcCcchheeeecccchhhHHHHHHHHHhhCC
Confidence            789999999999999999999999999999999998632     23333346788999999999998777765       


Q ss_pred             CCCEEEEccccCCCCCCC------CccccchhhhHHHHHHHHHHHHhc----CCCEEEEEeccceeccCCCCCCCCccCC
Q 025755           77 GCTGVFHVACPVPVGKVP------NPEVQLIDPAVVGTKNVLNSCVKA----KVKRVVVVSSIGAVMLNPNWPKGQVMDE  146 (248)
Q Consensus        77 ~id~vi~~ag~~~~~~~~------~~~~~~~~~n~~g~~~~~~~~~~~----~~~~iV~vSS~~~~~~~~~~~~~~~~~e  146 (248)
                      .++++|||||+....+..      +...+-+++|+.++.++...+.+.    .-..||+|||.-++-+....+-      
T Consensus        78 ~lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLafvPm~~~Pv------  151 (245)
T COG3967          78 NLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLAFVPMASTPV------  151 (245)
T ss_pred             chheeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEeccccccCccccccc------
Confidence            369999999987654332      222456789999998887777654    3468999999666555543333      


Q ss_pred             CCCCchhhhccccchHHHHHHHHHHHHHHHHH---hCCccEEEEccCeeecC
Q 025755          147 ECWSDEEFCKATENYYCLAKTIAEIQALEYAK---RGELDIVTVCPSIVIGP  195 (248)
Q Consensus       147 ~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~---~~~i~v~~vrpg~i~g~  195 (248)
                                     ||.+|+........+..   ..+++|.-+.|+.|.++
T Consensus       152 ---------------YcaTKAaiHsyt~aLR~Qlk~t~veVIE~~PP~V~t~  188 (245)
T COG3967         152 ---------------YCATKAAIHSYTLALREQLKDTSVEVIELAPPLVDTT  188 (245)
T ss_pred             ---------------chhhHHHHHHHHHHHHHHhhhcceEEEEecCCceecC
Confidence                           99999755555444433   23699999999999997

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.88  E-value=3.4e-21  Score=156.54  Aligned_cols=167  Identities=17%  Similarity=0.103  Sum_probs=119.3

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEE
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFH   83 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~   83 (248)
                      +++|+++||||+||||+++++.|+++|++|++++|+..+....    ... . ...++.+|++|.+++.+.+.++|++||
T Consensus        12 l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~----~~~-~-~~~~~~~D~~~~~~~~~~~~~iDilVn   85 (245)
T PRK12367         12 WQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSES----NDE-S-PNEWIKWECGKEESLDKQLASLDVLIL   85 (245)
T ss_pred             hCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhh----hcc-C-CCeEEEeeCCCHHHHHHhcCCCCEEEE
Confidence            5679999999999999999999999999999999876211111    111 1 225788999999999999999999999


Q ss_pred             ccccCCCCCC-CCccccchhhhHHHHHHHHHHHHhc-------CCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhh
Q 025755           84 VACPVPVGKV-PNPEVQLIDPAVVGTKNVLNSCVKA-------KVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFC  155 (248)
Q Consensus        84 ~ag~~~~~~~-~~~~~~~~~~n~~g~~~~~~~~~~~-------~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~  155 (248)
                      |||....... .+.+...+++|+.++.++++++.+.       +.+.++..||.++..+ +..                 
T Consensus        86 nAG~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~~~~-~~~-----------------  147 (245)
T PRK12367         86 NHGINPGGRQDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAEIQP-ALS-----------------  147 (245)
T ss_pred             CCccCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEecccccCC-CCC-----------------
Confidence            9997544322 3456788999999999999887653       1223444455443222 111                 


Q ss_pred             ccccchHHHHHHHHH---HHHHHHHH---hCCccEEEEccCeeecCCCC
Q 025755          156 KATENYYCLAKTIAE---IQALEYAK---RGELDIVTVCPSIVIGPMLQ  198 (248)
Q Consensus       156 ~~~~~~Y~~sK~~~e---~l~~~~~~---~~~i~v~~vrpg~i~g~~~~  198 (248)
                          ..|+.||++.+   .+..+++.   +.+++++.+.||.+.+++..
T Consensus       148 ----~~Y~aSKaal~~~~~l~~~l~~e~~~~~i~v~~~~pg~~~t~~~~  192 (245)
T PRK12367        148 ----PSYEISKRLIGQLVSLKKNLLDKNERKKLIIRKLILGPFRSELNP  192 (245)
T ss_pred             ----chhHHHHHHHHHHHHHHHHHHHhhcccccEEEEecCCCcccccCc
Confidence                23999997643   34444432   23699999999999887643

>PLN02503 fatty acyl-CoA reductase 2

Probab=99.88  E-value=3.3e-22  Score=178.90  Aligned_cols=233  Identities=15%  Similarity=0.100  Sum_probs=153.6

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCC---eEEEEEcCCCch-hhHHhh-hhc------------C------CCCCeEE
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGY---MVHGTVRDPCDE-KNAHLK-KLE------------G------ASENLQL   60 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~---~V~~~~r~~~~~-~~~~~~-~~~------------~------~~~~~~~   60 (248)
                      +++|+|+|||||||||++++++|++.+.   +|+++.|.+... ..+.++ ++.            +      ...++..
T Consensus       117 ~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~  196 (605)
T PLN02503        117 LRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVP  196 (605)
T ss_pred             hcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEE
Confidence            5789999999999999999999998764   679999865422 111221 110            0      1346889


Q ss_pred             EEccCCCH------HHHHHHhCCCCEEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhc-CCCEEEEEeccceec
Q 025755           61 FKTDLLDY------EALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKA-KVKRVVVVSSIGAVM  133 (248)
Q Consensus        61 ~~~Di~d~------~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~-~~~~iV~vSS~~~~~  133 (248)
                      +.+|++++      +..+.+.+++|+|||+|+....   ..+....+++|+.|+.+++++|++. +.+++||+||.. ++
T Consensus       197 v~GDl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v~f---~~~~~~a~~vNV~GT~nLLelA~~~~~lk~fV~vSTay-Vy  272 (605)
T PLN02503        197 VVGNVCESNLGLEPDLADEIAKEVDVIINSAANTTF---DERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVSTAY-VN  272 (605)
T ss_pred             EEeeCCCcccCCCHHHHHHHHhcCCEEEECcccccc---ccCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEccCce-ee
Confidence            99999986      4667777889999999998764   2445778999999999999999887 568999999965 45


Q ss_pred             cCCC-CCCCCccCCCC-----------------CCc-------------------------------hhhhccccchHHH
Q 025755          134 LNPN-WPKGQVMDEEC-----------------WSD-------------------------------EEFCKATENYYCL  164 (248)
Q Consensus       134 ~~~~-~~~~~~~~e~~-----------------~~~-------------------------------~~~~~~~~~~Y~~  164 (248)
                      +... .-.+.+++...                 +..                               +.....+.|.|..
T Consensus       273 G~~~G~i~E~~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~l~~~g~~~~~~~~~pNtYt~  352 (605)
T PLN02503        273 GQRQGRIMEKPFRMGDCIARELGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQKMKDLGLERAKLYGWQDTYVF  352 (605)
T ss_pred             cCCCCeeeeeecCcccccccccccccccccccccCCHHHHHHHHHHhhhcccchHHHHHHhhhcccchhhhCCCCChHHH
Confidence            5431 11122222000                 000                               0011334488999


Q ss_pred             HHHHHHHHHHHHHHhCCccEEEEccCeeecCCCCCCCC------ccHHHHHHHHcCCCCCCCCCchhhhhhhhhccceeE
Q 025755          165 AKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTIN------TSSLLLLGFLKGFFFTTPSHSYMLERTLVLNQGVRL  238 (248)
Q Consensus       165 sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~------~~~~~~~~~~~~~~l~~~~~~~~~g~~l~vd~g~~~  238 (248)
                      +|+++|.++++...  ++++.++||+.|.+....|-+.      .....+.....|.......+.....+++.||.-+++
T Consensus       353 TK~lAE~lV~~~~~--~LPv~IvRPsiV~st~~eP~pGw~d~~~~~~p~~~~~g~G~lr~~~~~~~~~~DiVPVD~vvna  430 (605)
T PLN02503        353 TKAMGEMVINSMRG--DIPVVIIRPSVIESTWKDPFPGWMEGNRMMDPIVLYYGKGQLTGFLADPNGVLDVVPADMVVNA  430 (605)
T ss_pred             HHHHHHHHHHHhcC--CCCEEEEcCCEecccccCCccccccCccccchhhhheeccceeEEEeCCCeeEeEEeecHHHHH
Confidence            99999999997653  5999999999995533222111      111122222344333344455556677888877776


Q ss_pred             EEee
Q 025755          239 YRCK  242 (248)
Q Consensus       239 ~~~~  242 (248)
                      +.++
T Consensus       431 ~i~a  434 (605)
T PLN02503        431 TLAA  434 (605)
T ss_pred             HHHH
Confidence            6555

>PRK08017 oxidoreductase; Provisional

Probab=99.88  E-value=3e-21  Score=157.78  Aligned_cols=164  Identities=21%  Similarity=0.204  Sum_probs=121.6

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC--------C
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA--------G   77 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~--------~   77 (248)
                      +|+++||||+|+||+++++.|+++|++|++++|+.+..  +...   .  .++..+.+|+.|.+++..+++        .
T Consensus         2 ~k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~--~~~~---~--~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~   74 (256)
T PRK08017          2 QKSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDV--ARMN---S--LGFTGILLDLDDPESVERAADEVIALTDNR   74 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHh--HHHH---h--CCCeEEEeecCCHHHHHHHHHHHHHhcCCC
Confidence            37899999999999999999999999999999976421  1111   1  246788999999888766553        4


Q ss_pred             CCEEEEccccCCCCC----CCCccccchhhhHHHHHHH----HHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCC
Q 025755           78 CTGVFHVACPVPVGK----VPNPEVQLIDPAVVGTKNV----LNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECW  149 (248)
Q Consensus        78 id~vi~~ag~~~~~~----~~~~~~~~~~~n~~g~~~~----~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~  149 (248)
                      +|.+||+||......    ..+.++..+++|+.|+.++    ++.+++.+.++||++||..+..+.+..           
T Consensus        75 ~~~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~-----------  143 (256)
T PRK08017         75 LYGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMGLISTPGR-----------  143 (256)
T ss_pred             CeEEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCEEEEEcCcccccCCCCc-----------
Confidence            689999999654321    1233457889999998775    555566677899999997655444332           


Q ss_pred             CchhhhccccchHHHHHHHHHHHHHHHHH---hCCccEEEEccCeeecCCC
Q 025755          150 SDEEFCKATENYYCLAKTIAEIQALEYAK---RGELDIVTVCPSIVIGPML  197 (248)
Q Consensus       150 ~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~---~~~i~v~~vrpg~i~g~~~  197 (248)
                                ..|+.+|...+.+.+.++.   ..++++++++||.+.++..
T Consensus       144 ----------~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~  184 (256)
T PRK08017        144 ----------GAYAASKYALEAWSDALRMELRHSGIKVSLIEPGPIRTRFT  184 (256)
T ss_pred             ----------cHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEeCCCcccchh
Confidence                      2399999888877665432   3469999999999987754

>PLN00016 RNA-binding protein; Provisional

Probab=99.87  E-value=6.6e-22  Score=170.65  Aligned_cols=206  Identities=16%  Similarity=0.166  Sum_probs=143.7

Q ss_pred             CCCcEEEEE----cCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHH---hhhhcC-CCCCeEEEEccCCCHHHHHHHh
Q 025755            4 EDKERVCVT----GAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAH---LKKLEG-ASENLQLFKTDLLDYEALCAAT   75 (248)
Q Consensus         4 l~~k~vlVt----G~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~---~~~~~~-~~~~~~~~~~Di~d~~~~~~~~   75 (248)
                      .++++|+||    ||||+||+++++.|+++||+|++++|+........   ...... ....+.++.+|+.|.+.+. ..
T Consensus        50 ~~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~~~-~~  128 (378)
T PLN00016         50 VEKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVWGDPADVKSKV-AG  128 (378)
T ss_pred             cccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhhcCceEEEecHHHHHhhh-cc
Confidence            356899999    99999999999999999999999999864211100   000000 1235888999997733322 12


Q ss_pred             CCCCEEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhh
Q 025755           76 AGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFC  155 (248)
Q Consensus        76 ~~id~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~  155 (248)
                      .++|+|||+++.                +..++.++++++++.+++++||+||.. +|+...   ..+..|+++..+   
T Consensus       129 ~~~d~Vi~~~~~----------------~~~~~~~ll~aa~~~gvkr~V~~SS~~-vyg~~~---~~p~~E~~~~~p---  185 (378)
T PLN00016        129 AGFDVVYDNNGK----------------DLDEVEPVADWAKSPGLKQFLFCSSAG-VYKKSD---EPPHVEGDAVKP---  185 (378)
T ss_pred             CCccEEEeCCCC----------------CHHHHHHHHHHHHHcCCCEEEEEccHh-hcCCCC---CCCCCCCCcCCC---
Confidence            478999999752                134688999999999999999999975 454422   345566655443   


Q ss_pred             ccccchHHHHHHHHHHHHHHHHHhCCccEEEEccCeeecCCCCCCCCccHHHHHHHHcCCCCCCCCCchhhhhhhhhccc
Q 025755          156 KATENYYCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKGFFFTTPSHSYMLERTLVLNQG  235 (248)
Q Consensus       156 ~~~~~~Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~l~vd~g  235 (248)
                            +. +|..+|.++.    +.+++++++||+++|||....  .....++..+..+..+..+..+....+.++++|.
T Consensus       186 ------~~-sK~~~E~~l~----~~~l~~~ilRp~~vyG~~~~~--~~~~~~~~~~~~~~~i~~~g~g~~~~~~i~v~Dv  252 (378)
T PLN00016        186 ------KA-GHLEVEAYLQ----KLGVNWTSFRPQYIYGPGNNK--DCEEWFFDRLVRGRPVPIPGSGIQLTQLGHVKDL  252 (378)
T ss_pred             ------cc-hHHHHHHHHH----HcCCCeEEEeceeEECCCCCC--chHHHHHHHHHcCCceeecCCCCeeeceecHHHH
Confidence                  22 7888887654    346999999999999997643  2334566677777666555555555668899998


Q ss_pred             eeEEEeeccCC
Q 025755          236 VRLYRCKIQIP  246 (248)
Q Consensus       236 ~~~~~~~~~~p  246 (248)
                      ..++..+++.|
T Consensus       253 a~ai~~~l~~~  263 (378)
T PLN00016        253 ASMFALVVGNP  263 (378)
T ss_pred             HHHHHHHhcCc
Confidence            88777666654

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=99.87  E-value=7.4e-22  Score=151.14  Aligned_cols=152  Identities=19%  Similarity=0.199  Sum_probs=121.5

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCCC-eEEEEEcCC-CchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-------C
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKGY-MVHGTVRDP-CDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-------G   77 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g~-~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-------~   77 (248)
                      |+++||||+++||+++++.|+++|. .|+++.|+. .+........+.....++.++++|+++.++++++++       .
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP   80 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            7899999999999999999999954 777888871 122233334444455789999999999999888875       5


Q ss_pred             CCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCchh
Q 025755           78 CTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEE  153 (248)
Q Consensus        78 id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~  153 (248)
                      +|++|||||.......    .+.+..++++|+.+...+.+++.+.+.++||++||..+..+.+....             
T Consensus        81 ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~-------------  147 (167)
T PF00106_consen   81 LDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLPQGGGKIVNISSIAGVRGSPGMSA-------------  147 (167)
T ss_dssp             ESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHTTEEEEEEEEGGGTSSSTTBHH-------------
T ss_pred             ccccccccccccccccccccchhhhhccccccceeeeeeehheeccccceEEecchhhccCCCCChh-------------
Confidence            7999999998774322    23456789999999999999999977789999999988877765433             


Q ss_pred             hhccccchHHHHHHHHHHHHHHHHHh
Q 025755          154 FCKATENYYCLAKTIAEIQALEYAKR  179 (248)
Q Consensus       154 ~~~~~~~~Y~~sK~~~e~l~~~~~~~  179 (248)
                              |+.+|++.+.+++.++.+
T Consensus       148 --------Y~askaal~~~~~~la~e  165 (167)
T PF00106_consen  148 --------YSASKAALRGLTQSLAAE  165 (167)
T ss_dssp             --------HHHHHHHHHHHHHHHHHH
T ss_pred             --------HHHHHHHHHHHHHHHHHh
Confidence                    999999888888887765

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.87  E-value=4.4e-21  Score=147.55  Aligned_cols=165  Identities=24%  Similarity=0.259  Sum_probs=127.5

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCCC-eEEEEEcCCCchhhHH--hhhhcCCCCCeEEEEccCCCHHHHHHHhC-------
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKGY-MVHGTVRDPCDEKNAH--LKKLEGASENLQLFKTDLLDYEALCAATA-------   76 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~~~--~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-------   76 (248)
                      |+++||||+|+||++++++|+++|+ .|++..|+........  ...+.....++.++.+|+++.++++++++       
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   80 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAALAAIPARLG   80 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            5899999999999999999999996 6888888754322111  23333334578889999999988887754       


Q ss_pred             CCCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCch
Q 025755           77 GCTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDE  152 (248)
Q Consensus        77 ~id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~  152 (248)
                      .+|.|||+||.......    .+.+..++++|+.++.++++++.+.+.+++|++||..+.++.+....            
T Consensus        81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ii~~ss~~~~~~~~~~~~------------  148 (180)
T smart00822       81 PLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDLPLDFFVLFSSVAGVLGNPGQAN------------  148 (180)
T ss_pred             CeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccCCcceEEEEccHHHhcCCCCchh------------
Confidence            36999999997543211    23446789999999999999998888889999999877666544333            


Q ss_pred             hhhccccchHHHHHHHHHHHHHHHHHhCCccEEEEccCeee
Q 025755          153 EFCKATENYYCLAKTIAEIQALEYAKRGELDIVTVCPSIVI  193 (248)
Q Consensus       153 ~~~~~~~~~Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~  193 (248)
                               |+.+|...+.++..+... +++++++.||.+.
T Consensus       149 ---------y~~sk~~~~~~~~~~~~~-~~~~~~~~~g~~~  179 (180)
T smart00822      149 ---------YAAANAFLDALAAHRRAR-GLPATSINWGAWA  179 (180)
T ss_pred             ---------hHHHHHHHHHHHHHHHhc-CCceEEEeecccc
Confidence                     999999999999776654 5999999999864

It uses NADPH to reduce the keto group to a hydroxy group.

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=99.87  E-value=4e-21  Score=148.08  Aligned_cols=176  Identities=18%  Similarity=0.148  Sum_probs=127.4

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHC-CCeEEEEE-cCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC------
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLK-GYMVHGTV-RDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA------   76 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~-g~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~------   76 (248)
                      ..|.++||||++|||..++++|++. |.++++.. |+.+.+ ...++......+++++++.|+++.+++.++++      
T Consensus         2 spksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a-~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~iV   80 (249)
T KOG1611|consen    2 SPKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKA-ATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKIV   80 (249)
T ss_pred             CCccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHh-hHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhhc
Confidence            4578999999999999999999975 66666555 445432 33333333346899999999999998888775      


Q ss_pred             ---CCCEEEEccccCCCCCC-----CCccccchhhhHHHHHHHHHHHHhc----C-----------CCEEEEEeccceec
Q 025755           77 ---GCTGVFHVACPVPVGKV-----PNPEVQLIDPAVVGTKNVLNSCVKA----K-----------VKRVVVVSSIGAVM  133 (248)
Q Consensus        77 ---~id~vi~~ag~~~~~~~-----~~~~~~~~~~n~~g~~~~~~~~~~~----~-----------~~~iV~vSS~~~~~  133 (248)
                         ++|++|+|||+...-..     ...|.+.+++|..++..+.+++.+.    .           ...|||+||.++-.
T Consensus        81 g~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~s~  160 (249)
T KOG1611|consen   81 GSDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAGSI  160 (249)
T ss_pred             ccCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeecccccc
Confidence               46999999997643211     2335678999999987777766432    1           23799999977543


Q ss_pred             cCCCCCCCCccCCCCCCchhhhccccchHHHHHH----HHHHHHHHHHHhCCccEEEEccCeeecCCCCCC
Q 025755          134 LNPNWPKGQVMDEECWSDEEFCKATENYYCLAKT----IAEIQALEYAKRGELDIVTVCPSIVIGPMLQPT  200 (248)
Q Consensus       134 ~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~----~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~  200 (248)
                      +...                  ..+..+|.+||.    +++.+..++.+++ +-|+.+|||||.+++....
T Consensus       161 ~~~~------------------~~~~~AYrmSKaAlN~f~ksls~dL~~~~-ilv~sihPGwV~TDMgg~~  212 (249)
T KOG1611|consen  161 GGFR------------------PGGLSAYRMSKAALNMFAKSLSVDLKDDH-ILVVSIHPGWVQTDMGGKK  212 (249)
T ss_pred             CCCC------------------CcchhhhHhhHHHHHHHHHHhhhhhcCCc-EEEEEecCCeEEcCCCCCC
Confidence            3211                  011355999995    7777788887654 9999999999999987764

>PLN02778 3,5-epimerase/4-reductase

Probab=99.87  E-value=2.9e-21  Score=161.39  Aligned_cols=192  Identities=18%  Similarity=0.167  Sum_probs=126.7

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC--CCCEEE
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA--GCTGVF   82 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~--~id~vi   82 (248)
                      ..|+||||||+||||+++++.|+++|++|+...                         .|+.|.+.+...++  ++|+||
T Consensus         8 ~~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~-------------------------~~~~~~~~v~~~l~~~~~D~Vi   62 (298)
T PLN02778          8 ATLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGS-------------------------GRLENRASLEADIDAVKPTHVF   62 (298)
T ss_pred             CCCeEEEECCCCHHHHHHHHHHHhCCCEEEEec-------------------------CccCCHHHHHHHHHhcCCCEEE
Confidence            457899999999999999999999999987532                         23344455555554  689999


Q ss_pred             EccccCCCCC---CCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCC-CC--CCCccCCCCCCchhhhc
Q 025755           83 HVACPVPVGK---VPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPN-WP--KGQVMDEECWSDEEFCK  156 (248)
Q Consensus        83 ~~ag~~~~~~---~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~-~~--~~~~~~e~~~~~~~~~~  156 (248)
                      |+||......   ....+.+++++|+.++.+++++|++.+.+ ++++||.. +++... .+  ...+++|++++.     
T Consensus        63 H~Aa~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~gv~-~v~~sS~~-vy~~~~~~p~~~~~~~~Ee~~p~-----  135 (298)
T PLN02778         63 NAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRERGLV-LTNYATGC-IFEYDDAHPLGSGIGFKEEDTPN-----  135 (298)
T ss_pred             ECCcccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCC-EEEEecce-EeCCCCCCCcccCCCCCcCCCCC-----
Confidence            9999865322   23445788999999999999999999875 45566644 333211 11  122456655432     


Q ss_pred             cccchHHHHHHHHHHHHHHHHHhCCccEEEEccCeeecCCCCCCCCccHHHHHHHHcCCCCCCCCCchhhhhhhhhccce
Q 025755          157 ATENYYCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKGFFFTTPSHSYMLERTLVLNQGV  236 (248)
Q Consensus       157 ~~~~~Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~l~vd~g~  236 (248)
                      .+.++|+.||.++|.++..++.     ...+|++..+++...    ....++.++..+..+....     +..+|++|.+
T Consensus       136 ~~~s~Yg~sK~~~E~~~~~y~~-----~~~lr~~~~~~~~~~----~~~~fi~~~~~~~~~~~~~-----~s~~yv~D~v  201 (298)
T PLN02778        136 FTGSFYSKTKAMVEELLKNYEN-----VCTLRVRMPISSDLS----NPRNFITKITRYEKVVNIP-----NSMTILDELL  201 (298)
T ss_pred             CCCCchHHHHHHHHHHHHHhhc-----cEEeeecccCCcccc----cHHHHHHHHHcCCCeeEcC-----CCCEEHHHHH
Confidence            2245699999999999988764     356677666665321    1234677777665322111     2356666665


Q ss_pred             eEEEee
Q 025755          237 RLYRCK  242 (248)
Q Consensus       237 ~~~~~~  242 (248)
                      .++..+
T Consensus       202 ~al~~~  207 (298)
T PLN02778        202 PISIEM  207 (298)
T ss_pred             HHHHHH
Confidence            544443

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.87  E-value=1.8e-20  Score=153.00  Aligned_cols=172  Identities=24%  Similarity=0.244  Sum_probs=119.1

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCC-HHHHHHHh-CCCCEE
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLD-YEALCAAT-AGCTGV   81 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d-~~~~~~~~-~~id~v   81 (248)
                      .++|+|+||||+|+||+++++.|+++|++|+++.|+..... .    ......++.++++|++| .+.+.+.+ .++|+|
T Consensus        15 ~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~-~----~~~~~~~~~~~~~Dl~d~~~~l~~~~~~~~d~v   89 (251)
T PLN00141         15 VKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAK-T----SLPQDPSLQIVRADVTEGSDKLVEAIGDDSDAV   89 (251)
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHH-H----hcccCCceEEEEeeCCCCHHHHHHHhhcCCCEE
Confidence            56899999999999999999999999999999998864211 1    11113468899999998 46777777 689999


Q ss_pred             EEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccccch
Q 025755           82 FHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENY  161 (248)
Q Consensus        82 i~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~  161 (248)
                      ||++|.....    .....+++|..++.++++++.+.+.++||++||... ++...   ..+..+..     ...++...
T Consensus        90 i~~~g~~~~~----~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~~v-~g~~~---~~~~~~~~-----~~~~~~~~  156 (251)
T PLN00141         90 ICATGFRRSF----DPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSILV-NGAAM---GQILNPAY-----IFLNLFGL  156 (251)
T ss_pred             EECCCCCcCC----CCCCceeeehHHHHHHHHHHHHcCCCEEEEEccccc-cCCCc---ccccCcch-----hHHHHHHH
Confidence            9999864321    123346789999999999999988899999999753 43211   11111110     00011111


Q ss_pred             HHHHHHHHHHHHHHHHHhCCccEEEEccCeeecCCC
Q 025755          162 YCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPML  197 (248)
Q Consensus       162 Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~  197 (248)
                      |..+|..+|.++    .+.+++++++|||+++++..
T Consensus       157 ~~~~k~~~e~~l----~~~gi~~~iirpg~~~~~~~  188 (251)
T PLN00141        157 TLVAKLQAEKYI----RKSGINYTIVRPGGLTNDPP  188 (251)
T ss_pred             HHHHHHHHHHHH----HhcCCcEEEEECCCccCCCC
Confidence            334455555433    34569999999999998753

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=99.86  E-value=4.2e-21  Score=159.71  Aligned_cols=210  Identities=18%  Similarity=0.130  Sum_probs=132.3

Q ss_pred             EEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEEccccC
Q 025755            9 VCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFHVACPV   88 (248)
Q Consensus         9 vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~~ag~~   88 (248)
                      ||||||+|+||+++++.|+++|++|++++|+.......  .       ...  ..|+.. ..+...++++|+|||+|+..
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~--~-------~~~--~~~~~~-~~~~~~~~~~D~Vvh~a~~~   68 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANT--K-------WEG--YKPWAP-LAESEALEGADAVINLAGEP   68 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCcc--c-------cee--eecccc-cchhhhcCCCCEEEECCCCC
Confidence            68999999999999999999999999999987532110  0       001  122222 34556678899999999975


Q ss_pred             CCCC--CCCccccchhhhHHHHHHHHHHHHhcCCCE--EEEEeccceeccCCCCCCCCccCCCCCCchhhhccccchHHH
Q 025755           89 PVGK--VPNPEVQLIDPAVVGTKNVLNSCVKAKVKR--VVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCL  164 (248)
Q Consensus        89 ~~~~--~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~--iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~  164 (248)
                      ....  .......++++|+.++.++++++++.+.++  +|+.|| ..+|+...   ..+++|+.+..+      ...|+.
T Consensus        69 ~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~i~~S~-~~~yg~~~---~~~~~E~~~~~~------~~~~~~  138 (292)
T TIGR01777        69 IADKRWTEERKQEIRDSRIDTTRALVEAIAAAEQKPKVFISASA-VGYYGTSE---DRVFTEEDSPAG------DDFLAE  138 (292)
T ss_pred             cccccCCHHHHHHHHhcccHHHHHHHHHHHhcCCCceEEEEeee-EEEeCCCC---CCCcCcccCCCC------CChHHH
Confidence            4321  112335678999999999999999987643  333443 34555432   456777764322      223555


Q ss_pred             HHHHHHHHHHHHHHhCCccEEEEccCeeecCCCCCCCCccHHHHHHHHcCCCCCCCCCchhhhhhhhhccceeEEEeecc
Q 025755          165 AKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKGFFFTTPSHSYMLERTLVLNQGVRLYRCKIQ  244 (248)
Q Consensus       165 sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~l~vd~g~~~~~~~~~  244 (248)
                      .+...|.....+. +.+++++++||+.+|||...    ....++........ ...+++....+.+++|+-..++..+++
T Consensus       139 ~~~~~e~~~~~~~-~~~~~~~ilR~~~v~G~~~~----~~~~~~~~~~~~~~-~~~g~~~~~~~~i~v~Dva~~i~~~l~  212 (292)
T TIGR01777       139 LCRDWEEAAQAAE-DLGTRVVLLRTGIVLGPKGG----ALAKMLPPFRLGLG-GPLGSGRQWFSWIHIEDLVQLILFALE  212 (292)
T ss_pred             HHHHHHHHhhhch-hcCCceEEEeeeeEECCCcc----hhHHHHHHHhcCcc-cccCCCCcccccEeHHHHHHHHHHHhc
Confidence            5555565555443 45699999999999999642    22222211111110 011233334567899998888777776


Q ss_pred             CC
Q 025755          245 IP  246 (248)
Q Consensus       245 ~p  246 (248)
                      .|
T Consensus       213 ~~  214 (292)
T TIGR01777       213 NA  214 (292)
T ss_pred             Cc
Confidence            54

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=99.85  E-value=1.8e-21  Score=149.66  Aligned_cols=212  Identities=21%  Similarity=0.196  Sum_probs=163.9

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCC--eEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC--CCCEE
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGY--MVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA--GCTGV   81 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~--~id~v   81 (248)
                      +|+|+|||++|-+|+++.+.+.++|.  +=.++.-++                     .+|+++.++.+++|+  +...|
T Consensus         1 s~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~sk---------------------d~DLt~~a~t~~lF~~ekPthV   59 (315)
T KOG1431|consen    1 SKKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGSK---------------------DADLTNLADTRALFESEKPTHV   59 (315)
T ss_pred             CceEEEecCCchHHHHHHHHHHhcCCCCcceEEeccc---------------------cccccchHHHHHHHhccCCcee
Confidence            47999999999999999999998876  222222222                     389999999999997  57999


Q ss_pred             EEccccCCCCCC-CCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccccc
Q 025755           82 FHVACPVPVGKV-PNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATEN  160 (248)
Q Consensus        82 i~~ag~~~~~~~-~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~  160 (248)
                      ||.|+..+.... .....+++..|+.-..|++..|.+.|+++++++.|.+ +++...   .+||+|+...+- ++....-
T Consensus        60 IhlAAmVGGlf~N~~ynldF~r~Nl~indNVlhsa~e~gv~K~vsclStC-IfPdkt---~yPIdEtmvh~g-pphpsN~  134 (315)
T KOG1431|consen   60 IHLAAMVGGLFHNNTYNLDFIRKNLQINDNVLHSAHEHGVKKVVSCLSTC-IFPDKT---SYPIDETMVHNG-PPHPSNF  134 (315)
T ss_pred             eehHhhhcchhhcCCCchHHHhhcceechhHHHHHHHhchhhhhhhccee-ecCCCC---CCCCCHHHhccC-CCCCCch
Confidence            999997764322 2334788999999999999999999999999998866 666533   688898765431 1222345


Q ss_pred             hHHHHHHHHHHHHHHHHHhCCccEEEEccCeeecCCCCCC---CCccHHHHHHHHcCC-----CCCCCCCchhhhhhhhh
Q 025755          161 YYCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPT---INTSSLLLLGFLKGF-----FFTTPSHSYMLERTLVL  232 (248)
Q Consensus       161 ~Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~---~~~~~~~~~~~~~~~-----~l~~~~~~~~~g~~l~v  232 (248)
                      +|+.+|.++....+.|..++|...+.+-|.++|||.+..+   ...++.++.++..-+     .+..++++.-.+|.||+
T Consensus       135 gYsyAKr~idv~n~aY~~qhg~~~tsviPtNvfGphDNfnpe~sHVlPali~r~h~ak~~gtd~~~VwGsG~PlRqFiys  214 (315)
T KOG1431|consen  135 GYSYAKRMIDVQNQAYRQQHGRDYTSVIPTNVFGPHDNFNPENSHVLPALIHRFHEAKRNGTDELTVWGSGSPLRQFIYS  214 (315)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCceeeeccccccCCCCCCCcccccchHHHHHHHHHHHhcCCceEEEecCCChHHHHhhH
Confidence            6999999999999999999999999999999999987765   345677776664433     56677788888899999


Q ss_pred             ccceeEEEeec
Q 025755          233 NQGVRLYRCKI  243 (248)
Q Consensus       233 d~g~~~~~~~~  243 (248)
                      |+...++.+-+
T Consensus       215 ~DLA~l~i~vl  225 (315)
T KOG1431|consen  215 DDLADLFIWVL  225 (315)
T ss_pred             hHHHHHHHHHH
Confidence            99877654433

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.85  E-value=2.2e-22  Score=148.68  Aligned_cols=208  Identities=16%  Similarity=0.123  Sum_probs=157.2

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-------
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-------   76 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-------   76 (248)
                      .++-+.+||||.+|+|++.++.|+++|..|++++...+..... .+++   .+++.|...|++++.+++.++.       
T Consensus         7 ~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~v-akel---g~~~vf~padvtsekdv~aala~ak~kfg   82 (260)
T KOG1199|consen    7 TKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADV-AKEL---GGKVVFTPADVTSEKDVRAALAKAKAKFG   82 (260)
T ss_pred             hcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHH-HHHh---CCceEEeccccCcHHHHHHHHHHHHhhcc
Confidence            4678999999999999999999999999999999866543332 2222   5789999999999999988875       


Q ss_pred             CCCEEEEccccCCCC----------CCCCccccchhhhHHHHHHHHHHHHhc----------CCCEEEEEeccceeccCC
Q 025755           77 GCTGVFHVACPVPVG----------KVPNPEVQLIDPAVVGTKNVLNSCVKA----------KVKRVVVVSSIGAVMLNP  136 (248)
Q Consensus        77 ~id~vi~~ag~~~~~----------~~~~~~~~~~~~n~~g~~~~~~~~~~~----------~~~~iV~vSS~~~~~~~~  136 (248)
                      +.|..+||||+...-          ...++++.++++|+.|+.|+++.-...          ..+-||+..|.+++.+..
T Consensus        83 rld~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaafdgq~  162 (260)
T KOG1199|consen   83 RLDALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAFDGQT  162 (260)
T ss_pred             ceeeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeeecCcc
Confidence            479999999975421          113445778999999999998875321          235789998888887776


Q ss_pred             CCCCCCccCCCCCCchhhhccccchHHHHHH----HHHHHHHHHHHhCCccEEEEccCeeecCCCCCCCCccHHHHHHHH
Q 025755          137 NWPKGQVMDEECWSDEEFCKATENYYCLAKT----IAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTINTSSLLLLGFL  212 (248)
Q Consensus       137 ~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~----~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~  212 (248)
                      ++..                     |..||.    ++--++++++.++ ||++.|.||.+.+|+-...++....|+.+..
T Consensus       163 gqaa---------------------ysaskgaivgmtlpiardla~~g-ir~~tiapglf~tpllsslpekv~~fla~~i  220 (260)
T KOG1199|consen  163 GQAA---------------------YSASKGAIVGMTLPIARDLAGDG-IRFNTIAPGLFDTPLLSSLPEKVKSFLAQLI  220 (260)
T ss_pred             chhh---------------------hhcccCceEeeechhhhhcccCc-eEEEeecccccCChhhhhhhHHHHHHHHHhC
Confidence            5444                     999995    5666788888775 9999999999999987665544444544433


Q ss_pred             cCC------------CCCCCCCchhhhhhhhhcccee
Q 025755          213 KGF------------FFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       213 ~~~------------~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                      .-.            .-.+..+.|++|++|..||..+
T Consensus       221 pfpsrlg~p~eyahlvqaiienp~lngevir~dgalr  257 (260)
T KOG1199|consen  221 PFPSRLGHPHEYAHLVQAIIENPYLNGEVIRFDGALR  257 (260)
T ss_pred             CCchhcCChHHHHHHHHHHHhCcccCCeEEEecceec
Confidence            221            1224457899999999999754

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=99.85  E-value=4.4e-20  Score=150.47  Aligned_cols=173  Identities=22%  Similarity=0.217  Sum_probs=125.4

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCch-hhHHhhhhcCCC-CCeEEEEccCCC-HHHHHHHhC---
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDE-KNAHLKKLEGAS-ENLQLFKTDLLD-YEALCAATA---   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~-~~~~~~~~Di~d-~~~~~~~~~---   76 (248)
                      .+++|+++||||++|||+++++.|+++|++|++..++.... .....+...... ..+.+..+|+++ .++++.+++   
T Consensus         2 ~~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~   81 (251)
T COG1028           2 DLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAE   81 (251)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHHH
Confidence            37889999999999999999999999999999888876431 122222111111 367888899998 888777664   


Q ss_pred             ----CCCEEEEccccCCC----CCC-CCccccchhhhHHHHHHHHHHHHhc-CCCEEEEEeccceeccCCCC-CCCCccC
Q 025755           77 ----GCTGVFHVACPVPV----GKV-PNPEVQLIDPAVVGTKNVLNSCVKA-KVKRVVVVSSIGAVMLNPNW-PKGQVMD  145 (248)
Q Consensus        77 ----~id~vi~~ag~~~~----~~~-~~~~~~~~~~n~~g~~~~~~~~~~~-~~~~iV~vSS~~~~~~~~~~-~~~~~~~  145 (248)
                          ++|++|||||....    ... .+.+...+++|+.+...+.+.+.+. ..++||++||..+. ..+.. ..     
T Consensus        82 ~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~Iv~isS~~~~-~~~~~~~~-----  155 (251)
T COG1028          82 EEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQRIVNISSVAGL-GGPPGQAA-----  155 (251)
T ss_pred             HHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhCeEEEECCchhc-CCCCCcch-----
Confidence                48999999998653    122 2456788999999988888754433 11299999998866 54431 33     


Q ss_pred             CCCCCchhhhccccchHHHHHHH----HHHHHHHHHHhCCccEEEEccCeeecCCCC
Q 025755          146 EECWSDEEFCKATENYYCLAKTI----AEIQALEYAKRGELDIVTVCPSIVIGPMLQ  198 (248)
Q Consensus       146 e~~~~~~~~~~~~~~~Y~~sK~~----~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~  198 (248)
                                      |+.||+.    ++.+..++.+. |+++++|.||.+.+++..
T Consensus       156 ----------------Y~~sK~al~~~~~~l~~e~~~~-gi~v~~v~PG~~~t~~~~  195 (251)
T COG1028         156 ----------------YAASKAALIGLTKALALELAPR-GIRVNAVAPGYIDTPMTA  195 (251)
T ss_pred             ----------------HHHHHHHHHHHHHHHHHHHhhh-CcEEEEEEeccCCCcchh
Confidence                            9999964    45555444443 599999999988887655

>PRK05865 hypothetical protein; Provisional

Probab=99.85  E-value=1.4e-20  Score=173.60  Aligned_cols=172  Identities=22%  Similarity=0.196  Sum_probs=129.6

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEEccc
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFHVAC   86 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~~ag   86 (248)
                      |+|+||||+|+||+++++.|+++|++|++++|+..+.       .   ..++.++.+|++|.+++.++++++|+|||+|+
T Consensus         1 MkILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~-------~---~~~v~~v~gDL~D~~~l~~al~~vD~VVHlAa   70 (854)
T PRK05865          1 MRIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDS-------W---PSSADFIAADIRDATAVESAMTGADVVAHCAW   70 (854)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhh-------c---ccCceEEEeeCCCHHHHHHHHhCCCEEEECCC
Confidence            4799999999999999999999999999999875210       0   13578899999999999999999999999997


Q ss_pred             cCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccccchHHHHH
Q 025755           87 PVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAK  166 (248)
Q Consensus        87 ~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK  166 (248)
                      ....         .+++|+.++.+++++|++.+.++||++||..                                   |
T Consensus        71 ~~~~---------~~~vNv~GT~nLLeAa~~~gvkr~V~iSS~~-----------------------------------K  106 (854)
T PRK05865         71 VRGR---------NDHINIDGTANVLKAMAETGTGRIVFTSSGH-----------------------------------Q  106 (854)
T ss_pred             cccc---------hHHHHHHHHHHHHHHHHHcCCCeEEEECCcH-----------------------------------H
Confidence            5321         4689999999999999999989999999832                                   5


Q ss_pred             HHHHHHHHHHHHhCCccEEEEccCeeecCCCCCCCCccHHHHHHHHcCCCCCCCCCchhhhhhhhhccceeEEEeecc
Q 025755          167 TIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKGFFFTTPSHSYMLERTLVLNQGVRLYRCKIQ  244 (248)
Q Consensus       167 ~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~l~vd~g~~~~~~~~~  244 (248)
                      ..+|.++.    +++++++++||+++|||..       ..++...... .....+......+.+|+||...++..+++
T Consensus       107 ~aaE~ll~----~~gl~~vILRp~~VYGP~~-------~~~i~~ll~~-~v~~~G~~~~~~dfIhVdDVA~Ai~~aL~  172 (854)
T PRK05865        107 PRVEQMLA----DCGLEWVAVRCALIFGRNV-------DNWVQRLFAL-PVLPAGYADRVVQVVHSDDAQRLLVRALL  172 (854)
T ss_pred             HHHHHHHH----HcCCCEEEEEeceEeCCCh-------HHHHHHHhcC-ceeccCCCCceEeeeeHHHHHHHHHHHHh
Confidence            55676553    3579999999999999862       1223333221 11112222222357888888877766553

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.85  E-value=7e-21  Score=154.49  Aligned_cols=196  Identities=17%  Similarity=0.148  Sum_probs=131.4

Q ss_pred             HHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC----CCCEEEEccccCCCCCCCCcc
Q 025755           22 LVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA----GCTGVFHVACPVPVGKVPNPE   97 (248)
Q Consensus        22 ~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~----~id~vi~~ag~~~~~~~~~~~   97 (248)
                      ++++|+++|++|++++|+..+..            ...++++|++|.++++++++    ++|+||||||....    .++
T Consensus         1 ~a~~l~~~G~~Vv~~~r~~~~~~------------~~~~~~~Dl~~~~~v~~~~~~~~~~iD~li~nAG~~~~----~~~   64 (241)
T PRK12428          1 TARLLRFLGARVIGVDRREPGMT------------LDGFIQADLGDPASIDAAVAALPGRIDALFNIAGVPGT----APV   64 (241)
T ss_pred             ChHHHHhCCCEEEEEeCCcchhh------------hhHhhcccCCCHHHHHHHHHHhcCCCeEEEECCCCCCC----CCH
Confidence            47889999999999999864210            12467899999999998886    48999999997532    456


Q ss_pred             ccchhhhHHHHHHHHHHHHhc--CCCEEEEEeccceeccCCCCCCCCccCCCC---CCchh-------hhccccchHHHH
Q 025755           98 VQLIDPAVVGTKNVLNSCVKA--KVKRVVVVSSIGAVMLNPNWPKGQVMDEEC---WSDEE-------FCKATENYYCLA  165 (248)
Q Consensus        98 ~~~~~~n~~g~~~~~~~~~~~--~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~---~~~~~-------~~~~~~~~Y~~s  165 (248)
                      ...+++|+.++..+++.+.+.  +.++||++||..++....    ..+..++.   ...++       .+......|+.|
T Consensus        65 ~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~s  140 (241)
T PRK12428         65 ELVARVNFLGLRHLTEALLPRMAPGGAIVNVASLAGAEWPQ----RLELHKALAATASFDEGAAWLAAHPVALATGYQLS  140 (241)
T ss_pred             HHhhhhchHHHHHHHHHHHHhccCCcEEEEeCcHHhhcccc----chHHHHhhhccchHHHHHHhhhccCCCcccHHHHH
Confidence            789999999999999999865  347999999977653211    11111100   00000       011223569999


Q ss_pred             HHHHHHHHHHHH----HhCCccEEEEccCeeecCCCCCCCCcc-HHHHHHHH--cC------------CCCCCCCCchhh
Q 025755          166 KTIAEIQALEYA----KRGELDIVTVCPSIVIGPMLQPTINTS-SLLLLGFL--KG------------FFFTTPSHSYML  226 (248)
Q Consensus       166 K~~~e~l~~~~~----~~~~i~v~~vrpg~i~g~~~~~~~~~~-~~~~~~~~--~~------------~~l~~~~~~~~~  226 (248)
                      |.+.+.+.+.++    ...|++|++|+||.+.+++........ .....+..  .+            .++.++...+++
T Consensus       141 K~a~~~~~~~la~~e~~~~girvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~va~~~~~l~s~~~~~~~  220 (241)
T PRK12428        141 KEALILWTMRQAQPWFGARGIRVNCVAPGPVFTPILGDFRSMLGQERVDSDAKRMGRPATADEQAAVLVFLCSDAARWIN  220 (241)
T ss_pred             HHHHHHHHHHHHHHhhhccCeEEEEeecCCccCcccccchhhhhhHhhhhcccccCCCCCHHHHHHHHHHHcChhhcCcc
Confidence            987776666655    234799999999999999754211000 00010000  01            056677778999


Q ss_pred             hhhhhhcccee
Q 025755          227 ERTLVLNQGVR  237 (248)
Q Consensus       227 g~~l~vd~g~~  237 (248)
                      |+.+.+|||..
T Consensus       221 G~~i~vdgg~~  231 (241)
T PRK12428        221 GVNLPVDGGLA  231 (241)
T ss_pred             CcEEEecCchH
Confidence            99999999965

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.84  E-value=2.7e-19  Score=139.06  Aligned_cols=152  Identities=33%  Similarity=0.426  Sum_probs=117.8

Q ss_pred             EEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEEccccC
Q 025755            9 VCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFHVACPV   88 (248)
Q Consensus         9 vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~~ag~~   88 (248)
                      |+|+||||++|+.++++|+++|++|+++.|+..+...         ..+++++.+|+.|.+++.++++++|+||++++..
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~---------~~~~~~~~~d~~d~~~~~~al~~~d~vi~~~~~~   71 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED---------SPGVEIIQGDLFDPDSVKAALKGADAVIHAAGPP   71 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH---------CTTEEEEESCTTCHHHHHHHHTTSSEEEECCHST
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc---------ccccccceeeehhhhhhhhhhhhcchhhhhhhhh
Confidence            7999999999999999999999999999999753221         4689999999999999999999999999999754


Q ss_pred             CCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccccchHHHHHHH
Q 025755           89 PVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAKTI  168 (248)
Q Consensus        89 ~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~  168 (248)
                      ..             +.....++++++++.+.+++|++||... +....   .....+..+..        ..|...|..
T Consensus        72 ~~-------------~~~~~~~~~~a~~~~~~~~~v~~s~~~~-~~~~~---~~~~~~~~~~~--------~~~~~~~~~  126 (183)
T PF13460_consen   72 PK-------------DVDAAKNIIEAAKKAGVKRVVYLSSAGV-YRDPP---GLFSDEDKPIF--------PEYARDKRE  126 (183)
T ss_dssp             TT-------------HHHHHHHHHHHHHHTTSSEEEEEEETTG-TTTCT---SEEEGGTCGGG--------HHHHHHHHH
T ss_pred             cc-------------cccccccccccccccccccceeeecccc-CCCCC---cccccccccch--------hhhHHHHHH
Confidence            32             1777889999999999999999999663 33211   11111111111        237777777


Q ss_pred             HHHHHHHHHHhCCccEEEEccCeeecCCCC
Q 025755          169 AEIQALEYAKRGELDIVTVCPSIVIGPMLQ  198 (248)
Q Consensus       169 ~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~  198 (248)
                      +|....    +.+++++++||+.++++...
T Consensus       127 ~e~~~~----~~~~~~~ivrp~~~~~~~~~  152 (183)
T PF13460_consen  127 AEEALR----ESGLNWTIVRPGWIYGNPSR  152 (183)
T ss_dssp             HHHHHH----HSTSEEEEEEESEEEBTTSS
T ss_pred             HHHHHH----hcCCCEEEEECcEeEeCCCc
Confidence            765553    34699999999999998743

...

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=99.84  E-value=5e-20  Score=182.04  Aligned_cols=189  Identities=28%  Similarity=0.283  Sum_probs=135.2

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCC----CeEEEEEcCCCchhh-HHhhh-h-------cCCCCCeEEEEccCC------
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKG----YMVHGTVRDPCDEKN-AHLKK-L-------EGASENLQLFKTDLL------   66 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g----~~V~~~~r~~~~~~~-~~~~~-~-------~~~~~~~~~~~~Di~------   66 (248)
                      .++|+|||++|+||+++++.|++++    ++|+++.|+...... ..... .       .....++.++.+|+.      
T Consensus       971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lgl 1050 (1389)
T TIGR03443       971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFGL 1050 (1389)
T ss_pred             CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCCc
Confidence            5799999999999999999999887    889999997542211 11111 0       011246889999996      


Q ss_pred             CHHHHHHHhCCCCEEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCC--------
Q 025755           67 DYEALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNW--------  138 (248)
Q Consensus        67 d~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~--------  138 (248)
                      +.+....+.+++|+|||||+....   ..+...+...|+.|+.++++++.+.+.++++|+||.+.+......        
T Consensus      1051 ~~~~~~~l~~~~d~iiH~Aa~~~~---~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~vSS~~v~~~~~~~~~~~~~~~ 1127 (1389)
T TIGR03443      1051 SDEKWSDLTNEVDVIIHNGALVHW---VYPYSKLRDANVIGTINVLNLCAEGKAKQFSFVSSTSALDTEYYVNLSDELVQ 1127 (1389)
T ss_pred             CHHHHHHHHhcCCEEEECCcEecC---ccCHHHHHHhHHHHHHHHHHHHHhCCCceEEEEeCeeecCcccccchhhhhhh
Confidence            445677777899999999997653   233345567899999999999999888999999997654321100        


Q ss_pred             CCCCccCCCCCCchhhhccccchHHHHHHHHHHHHHHHHHhCCccEEEEccCeeecCCCCC
Q 025755          139 PKGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQP  199 (248)
Q Consensus       139 ~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~  199 (248)
                      .....+.|+.+..+ ....+.+.|+.||+.+|.++..+... |++++++|||.|+|+....
T Consensus      1128 ~~~~~~~e~~~~~~-~~~~~~~~Y~~sK~~aE~l~~~~~~~-g~~~~i~Rpg~v~G~~~~g 1186 (1389)
T TIGR03443      1128 AGGAGIPESDDLMG-SSKGLGTGYGQSKWVAEYIIREAGKR-GLRGCIVRPGYVTGDSKTG 1186 (1389)
T ss_pred             ccCCCCCccccccc-ccccCCCChHHHHHHHHHHHHHHHhC-CCCEEEECCCccccCCCcC
Confidence            00122344432221 12233466999999999999988765 6999999999999996554

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.84  E-value=2.5e-19  Score=154.25  Aligned_cols=168  Identities=13%  Similarity=0.024  Sum_probs=120.1

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEE
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFH   83 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~   83 (248)
                      +++|+++||||+||||++++++|+++|++|++++|+.++.. ..   .......+..+.+|++|.+++.+.+.++|++||
T Consensus       176 l~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~-~~---~~~~~~~v~~v~~Dvsd~~~v~~~l~~IDiLIn  251 (406)
T PRK07424        176 LKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKIT-LE---INGEDLPVKTLHWQVGQEAALAELLEKVDILII  251 (406)
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HH---HhhcCCCeEEEEeeCCCHHHHHHHhCCCCEEEE
Confidence            67899999999999999999999999999999998763221 11   111123467889999999999999999999999


Q ss_pred             ccccCCCCC-CCCccccchhhhHHHHHHHHHHHHhc----CC----CEEEEEeccceeccCCCCCCCCccCCCCCCchhh
Q 025755           84 VACPVPVGK-VPNPEVQLIDPAVVGTKNVLNSCVKA----KV----KRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEF  154 (248)
Q Consensus        84 ~ag~~~~~~-~~~~~~~~~~~n~~g~~~~~~~~~~~----~~----~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~  154 (248)
                      |||...... ..+.+...+++|+.++.++++++.+.    +.    +.+|++|+ +...+ +..                
T Consensus       252 nAGi~~~~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ss-a~~~~-~~~----------------  313 (406)
T PRK07424        252 NHGINVHGERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSE-AEVNP-AFS----------------  313 (406)
T ss_pred             CCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEcc-ccccC-CCc----------------
Confidence            999754332 22345678999999999998887653    21    23555554 32211 111                


Q ss_pred             hccccchHHHHHHHHHHHHHHHHHhCCccEEEEccCeeecCCCC
Q 025755          155 CKATENYYCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQ  198 (248)
Q Consensus       155 ~~~~~~~Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~  198 (248)
                           ..|+.||++.+.+........++.+..+.||.+.+++.+
T Consensus       314 -----~~Y~ASKaAl~~l~~l~~~~~~~~I~~i~~gp~~t~~~~  352 (406)
T PRK07424        314 -----PLYELSKRALGDLVTLRRLDAPCVVRKLILGPFKSNLNP  352 (406)
T ss_pred             -----hHHHHHHHHHHHHHHHHHhCCCCceEEEEeCCCcCCCCc
Confidence                 129999987777653333334577888888888776543

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=99.83  E-value=4.3e-19  Score=143.61  Aligned_cols=170  Identities=19%  Similarity=0.177  Sum_probs=127.6

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-------
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-------   76 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-------   76 (248)
                      +..|.|+|||+-+|.|..+|++|.++|++|.+.+...+ +.+....+.  +.+++..+..|++++++++++.+       
T Consensus        27 ~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~-gae~L~~~~--~s~rl~t~~LDVT~~esi~~a~~~V~~~l~  103 (322)
T KOG1610|consen   27 LSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEE-GAESLRGET--KSPRLRTLQLDVTKPESVKEAAQWVKKHLG  103 (322)
T ss_pred             cCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCc-hHHHHhhhh--cCCcceeEeeccCCHHHHHHHHHHHHHhcc
Confidence            56789999999999999999999999999999886543 222222221  16789999999999999999875       


Q ss_pred             --CCCEEEEccccCCCC---CC--CCccccchhhhHHHHHHHHHHHHhc---CCCEEEEEeccceeccCCCCCCCCccCC
Q 025755           77 --GCTGVFHVACPVPVG---KV--PNPEVQLIDPAVVGTKNVLNSCVKA---KVKRVVVVSSIGAVMLNPNWPKGQVMDE  146 (248)
Q Consensus        77 --~id~vi~~ag~~~~~---~~--~~~~~~~~~~n~~g~~~~~~~~~~~---~~~~iV~vSS~~~~~~~~~~~~~~~~~e  146 (248)
                        +.-.||||||+....   +.  .+++...+++|+.|+..+.+++.+.   ..||||++||..+-.+.|...+      
T Consensus       104 ~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~~GR~~~p~~g~------  177 (322)
T KOG1610|consen  104 EDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSVLGRVALPALGP------  177 (322)
T ss_pred             cccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEecccccCccCccccc------
Confidence              356799999965432   11  2334678899999988887777654   3479999999887655554334      


Q ss_pred             CCCCchhhhccccchHHHHHHHHH----HHHHHHHHhCCccEEEEccCeeecCCCC
Q 025755          147 ECWSDEEFCKATENYYCLAKTIAE----IQALEYAKRGELDIVTVCPSIVIGPMLQ  198 (248)
Q Consensus       147 ~~~~~~~~~~~~~~~Y~~sK~~~e----~l~~~~~~~~~i~v~~vrpg~i~g~~~~  198 (248)
                                     |+.||...|    .+.+|+.. +|+.|.++-||.+-++...
T Consensus       178 ---------------Y~~SK~aVeaf~D~lR~EL~~-fGV~VsiiePG~f~T~l~~  217 (322)
T KOG1610|consen  178 ---------------YCVSKFAVEAFSDSLRRELRP-FGVKVSIIEPGFFKTNLAN  217 (322)
T ss_pred             ---------------chhhHHHHHHHHHHHHHHHHh-cCcEEEEeccCccccccCC
Confidence                           999996554    44555543 5799999999977776654

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=99.82  E-value=2.8e-19  Score=180.03  Aligned_cols=173  Identities=16%  Similarity=0.118  Sum_probs=138.1

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHC-CCeEEEEEcCCCch----------------------------------------
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLK-GYMVHGTVRDPCDE----------------------------------------   43 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~-g~~V~~~~r~~~~~----------------------------------------   43 (248)
                      +++++|||||++|||.+++++|+++ |++|++++|+....                                        
T Consensus      1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~ 2075 (2582)
T TIGR02813      1996 SDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRP 2075 (2582)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccc
Confidence            4789999999999999999999998 69999999982100                                        


Q ss_pred             ------hhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC------CCCEEEEccccCCCCC----CCCccccchhhhHHH
Q 025755           44 ------KNAHLKKLEGASENLQLFKTDLLDYEALCAATA------GCTGVFHVACPVPVGK----VPNPEVQLIDPAVVG  107 (248)
Q Consensus        44 ------~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~------~id~vi~~ag~~~~~~----~~~~~~~~~~~n~~g  107 (248)
                            ....++.+...+.++.++.+|++|.++++++++      ++|+||||||+.....    ..+.|..++++|+.|
T Consensus      2076 ~~~~~ei~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv~G 2155 (2582)
T TIGR02813      2076 VLSSLEIAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKTLQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKVDG 2155 (2582)
T ss_pred             cchhHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHHHH
Confidence                  001122223334678899999999998888775      4899999999865432    234567899999999


Q ss_pred             HHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccccchHHHHHHHHHHHHHHHHHhC-CccEEE
Q 025755          108 TKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKRG-ELDIVT  186 (248)
Q Consensus       108 ~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~-~i~v~~  186 (248)
                      ..++++++.+...++||++||..++++.+++..                     |+.+|.....++..++.++ +++|++
T Consensus      2156 ~~~Ll~al~~~~~~~IV~~SSvag~~G~~gqs~---------------------YaaAkaaL~~la~~la~~~~~irV~s 2214 (2582)
T TIGR02813      2156 LLSLLAALNAENIKLLALFSSAAGFYGNTGQSD---------------------YAMSNDILNKAALQLKALNPSAKVMS 2214 (2582)
T ss_pred             HHHHHHHHHHhCCCeEEEEechhhcCCCCCcHH---------------------HHHHHHHHHHHHHHHHHHcCCcEEEE
Confidence            999999998877789999999998888766544                     9999988888888777665 689999


Q ss_pred             EccCeeecCCCC
Q 025755          187 VCPSIVIGPMLQ  198 (248)
Q Consensus       187 vrpg~i~g~~~~  198 (248)
                      |.||.+.|++..
T Consensus      2215 I~wG~wdtgm~~ 2226 (2582)
T TIGR02813      2215 FNWGPWDGGMVN 2226 (2582)
T ss_pred             EECCeecCCccc
Confidence            999999988753

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.82  E-value=2.5e-19  Score=144.66  Aligned_cols=169  Identities=21%  Similarity=0.235  Sum_probs=132.2

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhc--CCCCCeEEEEccCCCHHHHHHHhCC-------
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLE--GASENLQLFKTDLLDYEALCAATAG-------   77 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~~Di~d~~~~~~~~~~-------   77 (248)
                      ++|+|||++.|||++++.++..+|++|.++.|+..+.. ...+.+.  ....++.+..+|+.|.+++...+++       
T Consensus        34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~-~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~  112 (331)
T KOG1210|consen   34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLL-EAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEGP  112 (331)
T ss_pred             ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHH-HHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccCC
Confidence            59999999999999999999999999999999875332 2222221  1233477999999999999988874       


Q ss_pred             CCEEEEccccCCCCCCC----CccccchhhhHHHHHHHHHHHHhc-----CCCEEEEEeccceeccCCCCCCCCccCCCC
Q 025755           78 CTGVFHVACPVPVGKVP----NPEVQLIDPAVVGTKNVLNSCVKA-----KVKRVVVVSSIGAVMLNPNWPKGQVMDEEC  148 (248)
Q Consensus        78 id~vi~~ag~~~~~~~~----~~~~~~~~~n~~g~~~~~~~~~~~-----~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~  148 (248)
                      +|.+|||||..-++...    ...+..+++|..|+.|+++++...     ..++|+.+||..+..+..+++.        
T Consensus       113 ~d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~~~i~Gysa--------  184 (331)
T KOG1210|consen  113 IDNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAMLGIYGYSA--------  184 (331)
T ss_pred             cceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhhcCcccccc--------
Confidence            69999999987766433    334567899999999999887644     2459999999999888887776        


Q ss_pred             CCchhhhccccchHHHHHH----HHHHHHHHHHHhCCccEEEEccCeeecCCCC
Q 025755          149 WSDEEFCKATENYYCLAKT----IAEIQALEYAKRGELDIVTVCPSIVIGPMLQ  198 (248)
Q Consensus       149 ~~~~~~~~~~~~~Y~~sK~----~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~  198 (248)
                                   |..+|.    +++.+.+|+.+. ++.|....|+.+.+|+..
T Consensus       185 -------------Ys~sK~alrgLa~~l~qE~i~~-~v~Vt~~~P~~~~tpGfE  224 (331)
T KOG1210|consen  185 -------------YSPSKFALRGLAEALRQELIKY-GVHVTLYYPPDTLTPGFE  224 (331)
T ss_pred             -------------cccHHHHHHHHHHHHHHHHhhc-ceEEEEEcCCCCCCCccc
Confidence                         999996    455555555544 599999999999999643

>PRK12320 hypothetical protein; Provisional

Probab=99.81  E-value=3.8e-19  Score=161.14  Aligned_cols=174  Identities=21%  Similarity=0.202  Sum_probs=122.2

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEEccc
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFHVAC   86 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~~ag   86 (248)
                      |+|+||||+||||++++++|+++|++|++++|.....          ...+++++++|++|.. +.+++.++|+|||+|+
T Consensus         1 MkILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~----------~~~~ve~v~~Dl~d~~-l~~al~~~D~VIHLAa   69 (699)
T PRK12320          1 MQILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDA----------LDPRVDYVCASLRNPV-LQELAGEADAVIHLAP   69 (699)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhc----------ccCCceEEEccCCCHH-HHHHhcCCCEEEEcCc
Confidence            3799999999999999999999999999999864210          1246889999999984 7788889999999998


Q ss_pred             cCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccccchHHHHH
Q 025755           87 PVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAK  166 (248)
Q Consensus        87 ~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK  166 (248)
                      ....        ...++|+.++.|++++|++.+. ++||+||..   +.+.  .                     |.   
T Consensus        70 ~~~~--------~~~~vNv~Gt~nLleAA~~~Gv-RiV~~SS~~---G~~~--~---------------------~~---  111 (699)
T PRK12320         70 VDTS--------APGGVGITGLAHVANAAARAGA-RLLFVSQAA---GRPE--L---------------------YR---  111 (699)
T ss_pred             cCcc--------chhhHHHHHHHHHHHHHHHcCC-eEEEEECCC---CCCc--c---------------------cc---
Confidence            6421        1125899999999999999886 799999852   2210  1                     32   


Q ss_pred             HHHHHHHHHHHHhCCccEEEEccCeeecCCCCCC-CCccHHHHHHHHcCCCCCCCCCchhhhhhhhhccceeEEEeecc
Q 025755          167 TIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPT-INTSSLLLLGFLKGFFFTTPSHSYMLERTLVLNQGVRLYRCKIQ  244 (248)
Q Consensus       167 ~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~g~~l~vd~g~~~~~~~~~  244 (248)
                       .+|.+..    .++++++++||+++|||..... ...+..++.....++.+.          ++||||.+.++..++.
T Consensus       112 -~aE~ll~----~~~~p~~ILR~~nVYGp~~~~~~~r~I~~~l~~~~~~~pI~----------vIyVdDvv~alv~al~  175 (699)
T PRK12320        112 -QAETLVS----TGWAPSLVIRIAPPVGRQLDWMVCRTVATLLRSKVSARPIR----------VLHLDDLVRFLVLALN  175 (699)
T ss_pred             -HHHHHHH----hcCCCEEEEeCceecCCCCcccHhHHHHHHHHHHHcCCceE----------EEEHHHHHHHHHHHHh
Confidence             2454443    3458999999999999964422 122333333333332221          2577777766554443

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.80  E-value=5.9e-19  Score=134.81  Aligned_cols=168  Identities=18%  Similarity=0.132  Sum_probs=125.3

Q ss_pred             CCcEEEEEc-CccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-------
Q 025755            5 DKERVCVTG-AGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-------   76 (248)
Q Consensus         5 ~~k~vlVtG-~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-------   76 (248)
                      +.|+|+||| ++||||.+++++|.++|+.|+++.|+.+.-.+     +.. ..++...+.|+++++++.++..       
T Consensus         6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~-----L~~-~~gl~~~kLDV~~~~~V~~v~~evr~~~~   79 (289)
T KOG1209|consen    6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQ-----LAI-QFGLKPYKLDVSKPEEVVTVSGEVRANPD   79 (289)
T ss_pred             CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhh-----HHH-hhCCeeEEeccCChHHHHHHHHHHhhCCC
Confidence            468899998 56899999999999999999999998752211     111 1358889999999998887654       


Q ss_pred             -CCCEEEEccccCCCC---CCC-CccccchhhhHHHHHHHHHHHHhc---CCCEEEEEeccceeccCCCCCCCCccCCCC
Q 025755           77 -GCTGVFHVACPVPVG---KVP-NPEVQLIDPAVVGTKNVLNSCVKA---KVKRVVVVSSIGAVMLNPNWPKGQVMDEEC  148 (248)
Q Consensus        77 -~id~vi~~ag~~~~~---~~~-~~~~~~~~~n~~g~~~~~~~~~~~---~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~  148 (248)
                       ++|+++||||..=..   +.+ ...+..+++|+.|..++.+++...   .-+.||+++|..++-+++..+.        
T Consensus        80 Gkld~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~~vpfpf~~i--------  151 (289)
T KOG1209|consen   80 GKLDLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAGVVPFPFGSI--------  151 (289)
T ss_pred             CceEEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeEEeccchhhh--------
Confidence             479999999964211   111 122568999999987777776533   2379999999988877775444        


Q ss_pred             CCchhhhccccchHHHHHHHHHHHHHHHHH---hCCccEEEEccCeeecCCCCC
Q 025755          149 WSDEEFCKATENYYCLAKTIAEIQALEYAK---RGELDIVTVCPSIVIGPMLQP  199 (248)
Q Consensus       149 ~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~---~~~i~v~~vrpg~i~g~~~~~  199 (248)
                                   |.+||++...+++.+.-   ..|++|+.+-||.|-+.-+..
T Consensus       152 -------------YsAsKAAihay~~tLrlEl~PFgv~Vin~itGGv~T~Ia~k  192 (289)
T KOG1209|consen  152 -------------YSASKAAIHAYARTLRLELKPFGVRVINAITGGVATDIADK  192 (289)
T ss_pred             -------------hhHHHHHHHHhhhhcEEeeeccccEEEEecccceecccccC
Confidence                         99999866666555542   247999999999999876544

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=99.79  E-value=3.7e-18  Score=138.13  Aligned_cols=200  Identities=16%  Similarity=0.152  Sum_probs=141.9

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcC-CCCCeEEEEccCCCHHH----HHHHhCC--C
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEG-ASENLQLFKTDLLDYEA----LCAATAG--C   78 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Di~d~~~----~~~~~~~--i   78 (248)
                      ++-++|||||.|||++.+++|+++|.+|++++|+.++. +...+++.. ..-.+.++..|.++.+.    +++.+.+  +
T Consensus        49 g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL-~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~~~V  127 (312)
T KOG1014|consen   49 GSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKL-EAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAGLDV  127 (312)
T ss_pred             CCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHH-HHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcCCce
Confidence            47899999999999999999999999999999998643 333333333 23568889999987654    5555554  4


Q ss_pred             CEEEEccccCCCC--C---CC-CccccchhhhHHHHHHHHHHHH----hcCCCEEEEEeccceeccCCCCCCCCccCCCC
Q 025755           79 TGVFHVACPVPVG--K---VP-NPEVQLIDPAVVGTKNVLNSCV----KAKVKRVVVVSSIGAVMLNPNWPKGQVMDEEC  148 (248)
Q Consensus        79 d~vi~~ag~~~~~--~---~~-~~~~~~~~~n~~g~~~~~~~~~----~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~  148 (248)
                      -++|||+|.....  .   .+ ...+..+.+|+.++..+.+...    +.+.|-||++||.++..+.|.++.        
T Consensus       128 gILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag~~p~p~~s~--------  199 (312)
T KOG1014|consen  128 GILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAGLIPTPLLSV--------  199 (312)
T ss_pred             EEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEeccccccccChhHHH--------
Confidence            5699999987622  1   11 2346788999999666555554    446789999999998887776544        


Q ss_pred             CCchhhhccccchHHHHHH----HHHHHHHHHHHhCCccEEEEccCeeecCCCCCCC-----CccHHHHHHHHcCCCCCC
Q 025755          149 WSDEEFCKATENYYCLAKT----IAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTI-----NTSSLLLLGFLKGFFFTT  219 (248)
Q Consensus       149 ~~~~~~~~~~~~~Y~~sK~----~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~-----~~~~~~~~~~~~~~~l~~  219 (248)
                                   |+.||.    +++.|..||..+ ||.|-++-|..|-+++.....     +....+.+.+....-...
T Consensus       200 -------------ysasK~~v~~~S~~L~~Ey~~~-gI~Vq~v~p~~VaTkm~~~~~~sl~~ps~~tfaksal~tiG~~~  265 (312)
T KOG1014|consen  200 -------------YSASKAFVDFFSRCLQKEYESK-GIFVQSVIPYLVATKMAKYRKPSLFVPSPETFAKSALNTIGNAS  265 (312)
T ss_pred             -------------HHHHHHHHHHHHHHHHHHHHhc-CeEEEEeehhheeccccccCCCCCcCcCHHHHHHHHHhhcCCcc
Confidence                         999997    555555555544 599999999999998865432     233445556665544555


Q ss_pred             CCCchhhhh
Q 025755          220 PSHSYMLER  228 (248)
Q Consensus       220 ~~~~~~~g~  228 (248)
                      ...+|++=+
T Consensus       266 ~TtGy~~H~  274 (312)
T KOG1014|consen  266 ETTGYLNHA  274 (312)
T ss_pred             cCCCccchH
Confidence            555665543

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=99.79  E-value=5.9e-18  Score=130.84  Aligned_cols=216  Identities=14%  Similarity=0.126  Sum_probs=150.2

Q ss_pred             CCCCCCcEEEEEc--CccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC--
Q 025755            1 MSGEDKERVCVTG--AGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA--   76 (248)
Q Consensus         1 m~~l~~k~vlVtG--~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~--   76 (248)
                      |..|+||++||+|  -.+.|+..+++.|.++|+++..++.+.  .....++++.+..+.-..++||+++.+++..+|+  
T Consensus         1 ~g~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e--~l~krv~~la~~~~s~~v~~cDV~~d~~i~~~f~~i   78 (259)
T COG0623           1 MGLLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGE--RLEKRVEELAEELGSDLVLPCDVTNDESIDALFATI   78 (259)
T ss_pred             CCccCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccH--HHHHHHHHHHhhccCCeEEecCCCCHHHHHHHHHHH
Confidence            4568999999999  557999999999999999999998875  2444455554444455678999999999998886  


Q ss_pred             -----CCCEEEEccccCCCCCCC--------CccccchhhhHHHHHHHHHHHHhc--CCCEEEEEeccceeccCCCCCCC
Q 025755           77 -----GCTGVFHVACPVPVGKVP--------NPEVQLIDPAVVGTKNVLNSCVKA--KVKRVVVVSSIGAVMLNPNWPKG  141 (248)
Q Consensus        77 -----~id~vi~~ag~~~~~~~~--------~~~~~~~~~n~~g~~~~~~~~~~~--~~~~iV~vSS~~~~~~~~~~~~~  141 (248)
                           ++|.+||+-+..+.....        +.+...+++.......+++++++.  ..++||-+|-.++....|+    
T Consensus        79 ~~~~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~ggSiltLtYlgs~r~vPn----  154 (259)
T COG0623          79 KKKWGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNNGGSILTLTYLGSERVVPN----  154 (259)
T ss_pred             HHhhCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCCCCcEEEEEeccceeecCC----
Confidence                 579999999987743221        222334455666667788888776  5578888865444333332    


Q ss_pred             CccCCCCCCchhhhccccchHHHHHHHHHH----HHHHHHHhCCccEEEEccCeeecCCCCCCCCccHHHHHHHHcC---
Q 025755          142 QVMDEECWSDEEFCKATENYYCLAKTIAEI----QALEYAKRGELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKG---  214 (248)
Q Consensus       142 ~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~----l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~~---  214 (248)
                                       .|.-|.+|+.-|.    ++.+++++ |||||.|.-|.+-+--.... .....++......   
T Consensus       155 -----------------YNvMGvAKAaLEasvRyLA~dlG~~-gIRVNaISAGPIrTLAasgI-~~f~~~l~~~e~~aPl  215 (259)
T COG0623         155 -----------------YNVMGVAKAALEASVRYLAADLGKE-GIRVNAISAGPIRTLAASGI-GDFRKMLKENEANAPL  215 (259)
T ss_pred             -----------------CchhHHHHHHHHHHHHHHHHHhCcc-CeEEeeecccchHHHHhhcc-ccHHHHHHHHHhhCCc
Confidence                             2337899975555    45555555 59999999998876322211 1112222221111   


Q ss_pred             -------------CCCCCCCCchhhhhhhhhccceeEEEe
Q 025755          215 -------------FFFTTPSHSYMLERTLVLNQGVRLYRC  241 (248)
Q Consensus       215 -------------~~l~~~~~~~~~g~~l~vd~g~~~~~~  241 (248)
                                   .||.++-+.-+||+++|||.|.+....
T Consensus       216 ~r~vt~eeVG~tA~fLlSdLssgiTGei~yVD~G~~i~~m  255 (259)
T COG0623         216 RRNVTIEEVGNTAAFLLSDLSSGITGEIIYVDSGYHIMGM  255 (259)
T ss_pred             cCCCCHHHhhhhHHHHhcchhcccccceEEEcCCceeecc
Confidence                         188999999999999999999997654

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=99.79  E-value=8.7e-19  Score=139.39  Aligned_cols=207  Identities=18%  Similarity=0.155  Sum_probs=154.4

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEE
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVF   82 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi   82 (248)
                      ++.|-++-|.|||||+|+.++.+|.+.|.+|++-.|..+.. ..+++ ..+.-+.+.++..|+.|+++++++++..++||
T Consensus        58 S~sGiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~-~r~lk-vmGdLGQvl~~~fd~~DedSIr~vvk~sNVVI  135 (391)
T KOG2865|consen   58 SVSGIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYD-PRHLK-VMGDLGQVLFMKFDLRDEDSIRAVVKHSNVVI  135 (391)
T ss_pred             cccceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccc-hhhee-ecccccceeeeccCCCCHHHHHHHHHhCcEEE
Confidence            35677899999999999999999999999999999966421 12222 23345789999999999999999999999999


Q ss_pred             EccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccccchH
Q 025755           83 HVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYY  162 (248)
Q Consensus        83 ~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y  162 (248)
                      |.-|---    +.....+.++|+.+...+++.|++.|+.|+|++|+..+-...+                       +-|
T Consensus       136 NLIGrd~----eTknf~f~Dvn~~~aerlAricke~GVerfIhvS~Lganv~s~-----------------------Sr~  188 (391)
T KOG2865|consen  136 NLIGRDY----ETKNFSFEDVNVHIAERLARICKEAGVERFIHVSCLGANVKSP-----------------------SRM  188 (391)
T ss_pred             Eeecccc----ccCCcccccccchHHHHHHHHHHhhChhheeehhhccccccCh-----------------------HHH
Confidence            9987422    2333677899999999999999999999999999865321110                       117


Q ss_pred             HHHHHHHHHHHHHHHHhCCccEEEEccCeeecCCCCCCCCccHHHHHHHHcCCCCCCC-CCchhhhhhhhhccceeEEEe
Q 025755          163 CLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKGFFFTTP-SHSYMLERTLVLNQGVRLYRC  241 (248)
Q Consensus       163 ~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~g~~l~vd~g~~~~~~  241 (248)
                      =.||+++|...++..++.    +++||..+||..++    .+..+.....+=.++.+. .....+.+.+||-|-..++..
T Consensus       189 LrsK~~gE~aVrdafPeA----tIirPa~iyG~eDr----fln~ya~~~rk~~~~pL~~~GekT~K~PVyV~DVaa~Ivn  260 (391)
T KOG2865|consen  189 LRSKAAGEEAVRDAFPEA----TIIRPADIYGTEDR----FLNYYASFWRKFGFLPLIGKGEKTVKQPVYVVDVAAAIVN  260 (391)
T ss_pred             HHhhhhhHHHHHhhCCcc----eeechhhhcccchh----HHHHHHHHHHhcCceeeecCCcceeeccEEEehHHHHHHH
Confidence            889999999999887665    99999999998775    333332222222233333 345677888888887666655


Q ss_pred             eccCC
Q 025755          242 KIQIP  246 (248)
Q Consensus       242 ~~~~p  246 (248)
                      |..-|
T Consensus       261 AvkDp  265 (391)
T KOG2865|consen  261 AVKDP  265 (391)
T ss_pred             hccCc
Confidence            55544

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.78  E-value=4.6e-18  Score=156.77  Aligned_cols=155  Identities=21%  Similarity=0.205  Sum_probs=112.4

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC--CCCEEE
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA--GCTGVF   82 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~--~id~vi   82 (248)
                      ..|+||||||+|+||+++++.|.++|++|...                         .+|++|.+.+.+.++  ++|+||
T Consensus       379 ~~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~~-------------------------~~~l~d~~~v~~~i~~~~pd~Vi  433 (668)
T PLN02260        379 PSLKFLIYGRTGWIGGLLGKLCEKQGIAYEYG-------------------------KGRLEDRSSLLADIRNVKPTHVF  433 (668)
T ss_pred             CCceEEEECCCchHHHHHHHHHHhCCCeEEee-------------------------ccccccHHHHHHHHHhhCCCEEE
Confidence            45789999999999999999999999887311                         145778888888776  689999


Q ss_pred             EccccCCCC---CCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCC--CCCCccCCCCCCchhhhcc
Q 025755           83 HVACPVPVG---KVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNW--PKGQVMDEECWSDEEFCKA  157 (248)
Q Consensus        83 ~~ag~~~~~---~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~--~~~~~~~e~~~~~~~~~~~  157 (248)
                      |+|+.....   .....+...+++|+.++.+++++|++.+. ++|++||...+.+....  ....+++|++++.+     
T Consensus       434 h~Aa~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~g~-~~v~~Ss~~v~~~~~~~~~~~~~p~~E~~~~~~-----  507 (668)
T PLN02260        434 NAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRENGL-LMMNFATGCIFEYDAKHPEGSGIGFKEEDKPNF-----  507 (668)
T ss_pred             ECCcccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHcCC-eEEEEcccceecCCcccccccCCCCCcCCCCCC-----
Confidence            999976432   22345578899999999999999999987 46777775433221100  11246676654332     


Q ss_pred             ccchHHHHHHHHHHHHHHHHHhCCccEEEEccCeeecC
Q 025755          158 TENYYCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGP  195 (248)
Q Consensus       158 ~~~~Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~  195 (248)
                      +.+.|+.||.++|.++..+.+     +.++|+.++|++
T Consensus       508 ~~~~Yg~sK~~~E~~~~~~~~-----~~~~r~~~~~~~  540 (668)
T PLN02260        508 TGSFYSKTKAMVEELLREYDN-----VCTLRVRMPISS  540 (668)
T ss_pred             CCChhhHHHHHHHHHHHhhhh-----heEEEEEEeccc
Confidence            235699999999999988743     356666667754

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.77  E-value=1.6e-17  Score=132.26  Aligned_cols=182  Identities=21%  Similarity=0.147  Sum_probs=141.9

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhH--Hhhhhc-CCCCCeEEEEccCCCHHHHHHHhC--CCC
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNA--HLKKLE-GASENLQLFKTDLLDYEALCAATA--GCT   79 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~--~~~~~~-~~~~~~~~~~~Di~d~~~~~~~~~--~id   79 (248)
                      ++|++||||-||.-|+.+++.|++.||+|+++.|..+.....  .+.+.. ....+++++.+|++|...+.++++  ++|
T Consensus         1 ~~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v~Pd   80 (345)
T COG1089           1 MGKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEVQPD   80 (345)
T ss_pred             CCceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhcCch
Confidence            368999999999999999999999999999999875433222  122221 123458999999999999999988  469


Q ss_pred             EEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCC--CEEEEEeccceeccCCCCCCCCccCCCCCCchhhhcc
Q 025755           80 GVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKV--KRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKA  157 (248)
Q Consensus        80 ~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~--~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~  157 (248)
                      -|+|.|+.+....+.+.+..+.+++-.|+.+++++.+-.+.  -||...||+ ..+|...   ..|.+|+.|+.|     
T Consensus        81 EIYNLaAQS~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQAStS-E~fG~v~---~~pq~E~TPFyP-----  151 (345)
T COG1089          81 EIYNLAAQSHVGVSFEQPEYTADVDAIGTLRLLEAIRILGEKKTRFYQASTS-ELYGLVQ---EIPQKETTPFYP-----  151 (345)
T ss_pred             hheeccccccccccccCcceeeeechhHHHHHHHHHHHhCCcccEEEecccH-HhhcCcc---cCccccCCCCCC-----
Confidence            99999999888877788899999999999999999998754  467777774 4666543   677788888776     


Q ss_pred             ccchHHHHHHHHHHHHHHHHHhCCccEEEEccCeeecCC
Q 025755          158 TENYYCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPM  196 (248)
Q Consensus       158 ~~~~Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~  196 (248)
                       .++|+.+|..+-.+...|.+.+|+-.+.=...+-.+|.
T Consensus       152 -rSPYAvAKlYa~W~tvNYResYgl~AcnGILFNHESP~  189 (345)
T COG1089         152 -RSPYAVAKLYAYWITVNYRESYGLFACNGILFNHESPL  189 (345)
T ss_pred             -CCHHHHHHHHHHheeeehHhhcCceeecceeecCCCCC
Confidence             56699999999999999999887644443333334444

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.75  E-value=1.8e-17  Score=128.62  Aligned_cols=163  Identities=23%  Similarity=0.283  Sum_probs=121.9

Q ss_pred             EEEEEcCccHHHHHHHHHHHHCCC-eEEEEEcCC--CchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCC-------
Q 025755            8 RVCVTGAGGYIASWLVKYLLLKGY-MVHGTVRDP--CDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAG-------   77 (248)
Q Consensus         8 ~vlVtG~~g~iG~~~~~~l~~~g~-~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~-------   77 (248)
                      +++||||.|+||..+++.|+++|. +|+++.|+.  .........++.....++.++.+|++|++++.++++.       
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~~   81 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRFGP   81 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTSS-
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhccCC
Confidence            689999999999999999999985 899999982  2223345566666677899999999999999999863       


Q ss_pred             CCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCchh
Q 025755           78 CTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEE  153 (248)
Q Consensus        78 id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~  153 (248)
                      ++.|||+||.......    .+.+...+...+.|..++.+++.+.....+|.+||..++.|.++...             
T Consensus        82 i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~~l~~~i~~SSis~~~G~~gq~~-------------  148 (181)
T PF08659_consen   82 IDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENRPLDFFILFSSISSLLGGPGQSA-------------  148 (181)
T ss_dssp             EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTTTTSEEEEEEEHHHHTT-TTBHH-------------
T ss_pred             cceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcCCCCeEEEECChhHhccCcchHh-------------
Confidence            6899999998654322    23345678889999999999999888899999999998888876444             


Q ss_pred             hhccccchHHHHHHHHHHHHHHHHHhCCccEEEEccCee
Q 025755          154 FCKATENYYCLAKTIAEIQALEYAKRGELDIVTVCPSIV  192 (248)
Q Consensus       154 ~~~~~~~~Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i  192 (248)
                              |+.+..+.+.++...... +.++.+|.-|..
T Consensus       149 --------YaaAN~~lda~a~~~~~~-g~~~~sI~wg~W  178 (181)
T PF08659_consen  149 --------YAAANAFLDALARQRRSR-GLPAVSINWGAW  178 (181)
T ss_dssp             --------HHHHHHHHHHHHHHHHHT-TSEEEEEEE-EB
T ss_pred             --------HHHHHHHHHHHHHHHHhC-CCCEEEEEcccc
Confidence                    999999999999887665 588888876654

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.75  E-value=1.3e-18  Score=134.35  Aligned_cols=172  Identities=17%  Similarity=0.145  Sum_probs=124.6

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcC-CCCCeEEEEccCCCHHHHHHHhC------
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEG-ASENLQLFKTDLLDYEALCAATA------   76 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Di~d~~~~~~~~~------   76 (248)
                      ...|.+|+||+++|||..++..+.+++-+.....++.....   .+.+.. ..+......+|++....+..+++      
T Consensus         4 ~~r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~---~~~L~v~~gd~~v~~~g~~~e~~~l~al~e~~r~k~   80 (253)
T KOG1204|consen    4 NMRKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAE---LEGLKVAYGDDFVHVVGDITEEQLLGALREAPRKKG   80 (253)
T ss_pred             ccceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhccccc---ccceEEEecCCcceechHHHHHHHHHHHHhhhhhcC
Confidence            35678999999999999999999888765554444332111   121111 12334445577776665555554      


Q ss_pred             -CCCEEEEccccCCCC-------CCCCccccchhhhHHHHHHHHHHHHhc--C---CCEEEEEeccceeccCCCCCCCCc
Q 025755           77 -GCTGVFHVACPVPVG-------KVPNPEVQLIDPAVVGTKNVLNSCVKA--K---VKRVVVVSSIGAVMLNPNWPKGQV  143 (248)
Q Consensus        77 -~id~vi~~ag~~~~~-------~~~~~~~~~~~~n~~g~~~~~~~~~~~--~---~~~iV~vSS~~~~~~~~~~~~~~~  143 (248)
                       +.|.||||||...+-       ...+.|..+++.|+++...+..++.+.  +   -+.+|++||.+++.+.+.|..   
T Consensus        81 gkr~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav~p~~~wa~---  157 (253)
T KOG1204|consen   81 GKRDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAVRPFSSWAA---  157 (253)
T ss_pred             CceeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhhccccHHHH---
Confidence             469999999976532       113456789999999988777776544  2   378999999999988877666   


Q ss_pred             cCCCCCCchhhhccccchHHHHHHHHHHHHHHHHHh-C-CccEEEEccCeeecCCCCC
Q 025755          144 MDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKR-G-ELDIVTVCPSIVIGPMLQP  199 (248)
Q Consensus       144 ~~e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~-~-~i~v~~vrpg~i~g~~~~~  199 (248)
                                        ||.+|++-+.+.+.++.+ . ++++.+++||.+.++++..
T Consensus       158 ------------------yc~~KaAr~m~f~~lA~EEp~~v~vl~~aPGvvDT~mq~~  197 (253)
T KOG1204|consen  158 ------------------YCSSKAARNMYFMVLASEEPFDVRVLNYAPGVVDTQMQVC  197 (253)
T ss_pred             ------------------hhhhHHHHHHHHHHHhhcCccceeEEEccCCcccchhHHH
Confidence                              999999999998888853 2 7999999999999998764

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=99.75  E-value=9.3e-18  Score=133.50  Aligned_cols=204  Identities=18%  Similarity=0.158  Sum_probs=132.8

Q ss_pred             EEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-CCCEEEEcccc
Q 025755            9 VCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-GCTGVFHVACP   87 (248)
Q Consensus         9 vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-~id~vi~~ag~   87 (248)
                      |+||||||+||++++..|.+.||+|+++.|+......           ++..   .++..+.+..... .+|+|||.||.
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~-----------~~~~---~v~~~~~~~~~~~~~~DavINLAG~   66 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQ-----------NLHP---NVTLWEGLADALTLGIDAVINLAGE   66 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhh-----------hcCc---cccccchhhhcccCCCCEEEECCCC
Confidence            6899999999999999999999999999999853211           1111   1112233444444 69999999995


Q ss_pred             CCCC--CCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEE-eccceeccCCCCCCCCccCCCCCCchhhhccccchHHH
Q 025755           88 VPVG--KVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVV-SSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCL  164 (248)
Q Consensus        88 ~~~~--~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~v-SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~  164 (248)
                      .-..  +.....+...+.-+..|..+.++..+...+.=+++ +|+.++|+...   ...++|+++...+|.         
T Consensus        67 ~I~~rrWt~~~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~~---~~~~tE~~~~g~~Fl---------  134 (297)
T COG1090          67 PIAERRWTEKQKEEIRQSRINTTEKLVELIAASETKPKVLISASAVGYYGHSG---DRVVTEESPPGDDFL---------  134 (297)
T ss_pred             ccccccCCHHHHHHHHHHHhHHHHHHHHHHHhccCCCcEEEecceEEEecCCC---ceeeecCCCCCCChH---------
Confidence            4332  33333366889999999999999987643333333 44457888754   778889888776654         


Q ss_pred             HHHHH--HHHHHHHHHhCCccEEEEccCeeecCCCCCCCCccHHHHH--HHHcCCCCCCCCCchhhhhhhhhccceeEEE
Q 025755          165 AKTIA--EIQALEYAKRGELDIVTVCPSIVIGPMLQPTINTSSLLLL--GFLKGFFFTTPSHSYMLERTLVLNQGVRLYR  240 (248)
Q Consensus       165 sK~~~--e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~--~~~~~~~l~~~~~~~~~g~~l~vd~g~~~~~  240 (248)
                      ++.+-  |..+... ++.|.||+.+|.|.|.++...    ....++.  +..-|..+   +++...-..|++||.+.++.
T Consensus       135 a~lc~~WE~~a~~a-~~~gtRvvllRtGvVLs~~GG----aL~~m~~~fk~glGG~~---GsGrQ~~SWIhieD~v~~I~  206 (297)
T COG1090         135 AQLCQDWEEEALQA-QQLGTRVVLLRTGVVLSPDGG----ALGKMLPLFKLGLGGKL---GSGRQWFSWIHIEDLVNAIL  206 (297)
T ss_pred             HHHHHHHHHHHhhh-hhcCceEEEEEEEEEecCCCc----chhhhcchhhhccCCcc---CCCCceeeeeeHHHHHHHHH
Confidence            22211  3333332 334699999999999998654    2233322  22222233   34444445699999988887


Q ss_pred             eeccCC
Q 025755          241 CKIQIP  246 (248)
Q Consensus       241 ~~~~~p  246 (248)
                      .++..+
T Consensus       207 fll~~~  212 (297)
T COG1090         207 FLLENE  212 (297)
T ss_pred             HHHhCc
Confidence            777643

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=99.74  E-value=8.7e-17  Score=138.29  Aligned_cols=190  Identities=23%  Similarity=0.258  Sum_probs=137.7

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCC---CeEEEEEcCCCch-hhHHhhh---------hcC----CCCCeEEEEccCC
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKG---YMVHGTVRDPCDE-KNAHLKK---------LEG----ASENLQLFKTDLL   66 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g---~~V~~~~r~~~~~-~~~~~~~---------~~~----~~~~~~~~~~Di~   66 (248)
                      +++|+|+|||||||+|+.++++|++.-   -+++++-|.+... ..+.+..         +..    ...++..+.+|+.
T Consensus        10 ~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~   89 (467)
T KOG1221|consen   10 YKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDIS   89 (467)
T ss_pred             hCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceecccccc
Confidence            578999999999999999999999853   3778888865422 1111111         111    2356788899996


Q ss_pred             C------HHHHHHHhCCCCEEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhc-CCCEEEEEeccceeccCCCCC
Q 025755           67 D------YEALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKA-KVKRVVVVSSIGAVMLNPNWP  139 (248)
Q Consensus        67 d------~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~-~~~~iV~vSS~~~~~~~~~~~  139 (248)
                      +      ..+++.+.+++|+|||+|+....   .+..+..+.+|..|++++++.|++. +.+.++++|++.+- .....-
T Consensus        90 ~~~LGis~~D~~~l~~eV~ivih~AAtvrF---de~l~~al~iNt~Gt~~~l~lak~~~~l~~~vhVSTAy~n-~~~~~i  165 (467)
T KOG1221|consen   90 EPDLGISESDLRTLADEVNIVIHSAATVRF---DEPLDVALGINTRGTRNVLQLAKEMVKLKALVHVSTAYSN-CNVGHI  165 (467)
T ss_pred             CcccCCChHHHHHHHhcCCEEEEeeeeecc---chhhhhhhhhhhHhHHHHHHHHHHhhhhheEEEeehhhee-cccccc
Confidence            5      35666778899999999998776   3455677899999999999999988 77899999996654 332222


Q ss_pred             CCCccCCCCCCchh--------------------hhccccchHHHHHHHHHHHHHHHHHhCCccEEEEccCeeecCCCCC
Q 025755          140 KGQVMDEECWSDEE--------------------FCKATENYYCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQP  199 (248)
Q Consensus       140 ~~~~~~e~~~~~~~--------------------~~~~~~~~Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~  199 (248)
                      .+.++.+.....++                    ....+.|.|.-+|+++|.++...+.  ++++.++||+.|......+
T Consensus       166 ~E~~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~~~--~lPivIiRPsiI~st~~EP  243 (467)
T KOG1221|consen  166 EEKPYPMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKEAE--NLPLVIIRPSIITSTYKEP  243 (467)
T ss_pred             cccccCccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhhcc--CCCeEEEcCCceeccccCC
Confidence            23334433322222                    1224557799999999999998764  5999999999999876654

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=99.66  E-value=2.2e-15  Score=125.20  Aligned_cols=134  Identities=18%  Similarity=0.167  Sum_probs=99.4

Q ss_pred             EEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHh------CC-CCE
Q 025755            8 RVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAAT------AG-CTG   80 (248)
Q Consensus         8 ~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~------~~-id~   80 (248)
                      +|+||||||++|++++++|+++|++|+++.|+.+...          ..++..+.+|+.|.+++.+++      ++ +|.
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~----------~~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~   70 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSA----------GPNEKHVKFDWLDEDTWDNPFSSDDGMEPEISA   70 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc----------CCCCccccccCCCHHHHHHHHhcccCcCCceeE
Confidence            4899999999999999999999999999999875211          135667789999999999998      56 999


Q ss_pred             EEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccccc
Q 025755           81 VFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATEN  160 (248)
Q Consensus        81 vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~  160 (248)
                      |+|+++....             ......+++++|++.++++||++||.....+.                         
T Consensus        71 v~~~~~~~~~-------------~~~~~~~~i~aa~~~gv~~~V~~Ss~~~~~~~-------------------------  112 (285)
T TIGR03649        71 VYLVAPPIPD-------------LAPPMIKFIDFARSKGVRRFVLLSASIIEKGG-------------------------  112 (285)
T ss_pred             EEEeCCCCCC-------------hhHHHHHHHHHHHHcCCCEEEEeeccccCCCC-------------------------
Confidence            9999864221             12345689999999999999999985432111                         


Q ss_pred             hHHHHHHHHHHHHHHHHHh-CCccEEEEccCeeecCC
Q 025755          161 YYCLAKTIAEIQALEYAKR-GELDIVTVCPSIVIGPM  196 (248)
Q Consensus       161 ~Y~~sK~~~e~l~~~~~~~-~~i~v~~vrpg~i~g~~  196 (248)
                         ..+...+.    +.++ .+++++++||++++...
T Consensus       113 ---~~~~~~~~----~l~~~~gi~~tilRp~~f~~~~  142 (285)
T TIGR03649       113 ---PAMGQVHA----HLDSLGGVEYTVLRPTWFMENF  142 (285)
T ss_pred             ---chHHHHHH----HHHhccCCCEEEEeccHHhhhh
Confidence               01111222    2233 37999999999888643

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>PRK06720 hypothetical protein; Provisional

Probab=99.61  E-value=3.1e-14  Score=108.95  Aligned_cols=127  Identities=14%  Similarity=0.093  Sum_probs=88.5

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-------
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-------   76 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-------   76 (248)
                      +++|+++||||++|||+++++.|+++|++|++++|+... .....+++........++.+|++|.++++++++       
T Consensus        14 l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~-~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G   92 (169)
T PRK06720         14 LAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQES-GQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAFS   92 (169)
T ss_pred             cCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHH-HHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            678999999999999999999999999999999987642 222223333334567788999999998887653       


Q ss_pred             CCCEEEEccccCCCCCC-CC---ccccchhhh--HHHHHHHHHHHHhc-------CCCEEEEEeccce
Q 025755           77 GCTGVFHVACPVPVGKV-PN---PEVQLIDPA--VVGTKNVLNSCVKA-------KVKRVVVVSSIGA  131 (248)
Q Consensus        77 ~id~vi~~ag~~~~~~~-~~---~~~~~~~~n--~~g~~~~~~~~~~~-------~~~~iV~vSS~~~  131 (248)
                      ++|++|||||....... ++   +.+..++.|  ...+..+...+.+.       ..+|+..|||.+.
T Consensus        93 ~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (169)
T PRK06720         93 RIDMLFQNAGLYKIDSIFSRQQENDSNVLCINDVWIEIKQLTSSFMKQQEEVVLSDLPIFGIIGTKGQ  160 (169)
T ss_pred             CCCEEEECCCcCCCCCcccccchhHhhceeccHHHHHHHHHHHHHHhcCCEEEeecCceeeEeccccc
Confidence            58999999997653311 11   123333344  44455555555443       4578888988553

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=99.60  E-value=1.2e-13  Score=103.63  Aligned_cols=164  Identities=20%  Similarity=0.254  Sum_probs=124.7

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEEccc
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFHVAC   86 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~~ag   86 (248)
                      |||.|+||+|-+|++++++.+++||+|+++.|+..+...         .+.+...+.|++|.+++.+.+.+.|+||..-+
T Consensus         1 mKIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~---------~~~~~i~q~Difd~~~~a~~l~g~DaVIsA~~   71 (211)
T COG2910           1 MKIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAA---------RQGVTILQKDIFDLTSLASDLAGHDAVISAFG   71 (211)
T ss_pred             CeEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhccc---------cccceeecccccChhhhHhhhcCCceEEEecc
Confidence            589999999999999999999999999999999752211         14678899999999999999999999998877


Q ss_pred             cCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccccchHHHHH
Q 025755           87 PVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAK  166 (248)
Q Consensus        87 ~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK  166 (248)
                      .....    +    ..........+++..+..+..|++.|+..++.+-.++   ...+  +.|..|.      .+|..++
T Consensus        72 ~~~~~----~----~~~~~k~~~~li~~l~~agv~RllVVGGAGSL~id~g---~rLv--D~p~fP~------ey~~~A~  132 (211)
T COG2910          72 AGASD----N----DELHSKSIEALIEALKGAGVPRLLVVGGAGSLEIDEG---TRLV--DTPDFPA------EYKPEAL  132 (211)
T ss_pred             CCCCC----h----hHHHHHHHHHHHHHHhhcCCeeEEEEcCccceEEcCC---ceee--cCCCCch------hHHHHHH
Confidence            54321    1    1222333667788888889999999999888887653   2222  2333332      2388888


Q ss_pred             HHHHHHHHHHHHhCCccEEEEccCeeecCCCCC
Q 025755          167 TIAEIQALEYAKRGELDIVTVCPSIVIGPMLQP  199 (248)
Q Consensus       167 ~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~  199 (248)
                      ..+|.|-.--+.+. +.++-++|...+-|+.+.
T Consensus       133 ~~ae~L~~Lr~~~~-l~WTfvSPaa~f~PGerT  164 (211)
T COG2910         133 AQAEFLDSLRAEKS-LDWTFVSPAAFFEPGERT  164 (211)
T ss_pred             HHHHHHHHHhhccC-cceEEeCcHHhcCCcccc
Confidence            88887765555555 999999999999997654

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=99.58  E-value=9.9e-14  Score=111.95  Aligned_cols=148  Identities=26%  Similarity=0.306  Sum_probs=101.0

Q ss_pred             EEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEEccccC
Q 025755            9 VCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFHVACPV   88 (248)
Q Consensus         9 vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~~ag~~   88 (248)
                      |+|+||||.+|+.+++.|++.+++|.++.|+......+.++.     ..+..+.+|..|.+++.++++++|.||.+.+..
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~~-----~g~~vv~~d~~~~~~l~~al~g~d~v~~~~~~~   75 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQA-----LGAEVVEADYDDPESLVAALKGVDAVFSVTPPS   75 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHHH-----TTTEEEES-TT-HHHHHHHHTTCSEEEEESSCS
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhhhc-----ccceEeecccCCHHHHHHHHcCCceEEeecCcc
Confidence            799999999999999999999999999999874222222222     356788999999999999999999999888654


Q ss_pred             CCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccccchHHHHHHH
Q 025755           89 PVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAKTI  168 (248)
Q Consensus        89 ~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~  168 (248)
                      .            ..-.....++++++++.+++++|+. |.........        ...|         ....-..|..
T Consensus        76 ~------------~~~~~~~~~li~Aa~~agVk~~v~s-s~~~~~~~~~--------~~~p---------~~~~~~~k~~  125 (233)
T PF05368_consen   76 H------------PSELEQQKNLIDAAKAAGVKHFVPS-SFGADYDESS--------GSEP---------EIPHFDQKAE  125 (233)
T ss_dssp             C------------CCHHHHHHHHHHHHHHHT-SEEEES-EESSGTTTTT--------TSTT---------HHHHHHHHHH
T ss_pred             h------------hhhhhhhhhHHHhhhccccceEEEE-Eecccccccc--------cccc---------cchhhhhhhh
Confidence            3            1234556789999999999999864 4332221100        0000         0112245555


Q ss_pred             HHHHHHHHHHhCCccEEEEccCeeecC
Q 025755          169 AEIQALEYAKRGELDIVTVCPSIVIGP  195 (248)
Q Consensus       169 ~e~l~~~~~~~~~i~v~~vrpg~i~g~  195 (248)
                      .|..+    ++.+++++++|||.++..
T Consensus       126 ie~~l----~~~~i~~t~i~~g~f~e~  148 (233)
T PF05368_consen  126 IEEYL----RESGIPYTIIRPGFFMEN  148 (233)
T ss_dssp             HHHHH----HHCTSEBEEEEE-EEHHH
T ss_pred             hhhhh----hhccccceeccccchhhh
Confidence            55444    444799999999987653

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=99.57  E-value=3.5e-14  Score=111.51  Aligned_cols=179  Identities=15%  Similarity=0.160  Sum_probs=125.3

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCC-----CeEEEEEcCCCchhhHHhhhhcCC----CCCeEEEEccCCCHHHHHHHh-
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKG-----YMVHGTVRDPCDEKNAHLKKLEGA----SENLQLFKTDLLDYEALCAAT-   75 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g-----~~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~~Di~d~~~~~~~~-   75 (248)
                      .|+++|||+++|||.++|.+|++..     .++++.+|+.++ .+..+..+...    .-++.++..|+++..++.++. 
T Consensus         3 RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~k-ae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~   81 (341)
T KOG1478|consen    3 RKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSK-AEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASK   81 (341)
T ss_pred             ceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhH-HHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHH
Confidence            4789999999999999999999864     457778888753 33444444433    346889999999988776664 


Q ss_pred             ------CCCCEEEEccccCCCCCC-------------------------------CCccccchhhhHHHHHHHHHHHHhc
Q 025755           76 ------AGCTGVFHVACPVPVGKV-------------------------------PNPEVQLIDPAVVGTKNVLNSCVKA  118 (248)
Q Consensus        76 ------~~id~vi~~ag~~~~~~~-------------------------------~~~~~~~~~~n~~g~~~~~~~~~~~  118 (248)
                            +++|.|+-|||..+....                               .+...+.+++|+.|...+++...+.
T Consensus        82 di~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~pl  161 (341)
T KOG1478|consen   82 DIKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELEPL  161 (341)
T ss_pred             HHHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhhhH
Confidence                  468999999997653210                               1233567899999999999888776


Q ss_pred             ----CCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccccchHHHHHHHHHHHHHHHHHhC---CccEEEEccCe
Q 025755          119 ----KVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKRG---ELDIVTVCPSI  191 (248)
Q Consensus       119 ----~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~---~i~v~~vrpg~  191 (248)
                          ....+|++||..+-...-..       |+ .  +  ......+|..||.+.+-+-....+..   |+.-.+++||.
T Consensus       162 l~~~~~~~lvwtSS~~a~kk~lsl-------eD-~--q--~~kg~~pY~sSKrl~DlLh~A~~~~~~~~g~~qyvv~pg~  229 (341)
T KOG1478|consen  162 LCHSDNPQLVWTSSRMARKKNLSL-------ED-F--Q--HSKGKEPYSSSKRLTDLLHVALNRNFKPLGINQYVVQPGI  229 (341)
T ss_pred             hhcCCCCeEEEEeecccccccCCH-------HH-H--h--hhcCCCCcchhHHHHHHHHHHHhccccccchhhhcccCce
Confidence                23589999997643222110       10 0  0  00112339999999998877766544   68889999998


Q ss_pred             eecCCC
Q 025755          192 VIGPML  197 (248)
Q Consensus       192 i~g~~~  197 (248)
                      ..+-..
T Consensus       230 ~tt~~~  235 (341)
T KOG1478|consen  230 FTTNSF  235 (341)
T ss_pred             eecchh
Confidence            876543

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=99.51  E-value=8.2e-13  Score=111.67  Aligned_cols=173  Identities=15%  Similarity=0.020  Sum_probs=105.6

Q ss_pred             CCcEEEEEcCccHHHHH--HHHHHHHCCCeEEEEEcCCCchhh-----------HHhhhhcCCCCCeEEEEccCCCHHHH
Q 025755            5 DKERVCVTGAGGYIASW--LVKYLLLKGYMVHGTVRDPCDEKN-----------AHLKKLEGASENLQLFKTDLLDYEAL   71 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~--~~~~l~~~g~~V~~~~r~~~~~~~-----------~~~~~~~~~~~~~~~~~~Di~d~~~~   71 (248)
                      .+|++||||+++++|.+  +++.| ++|++|+++++.......           ...+........+..+.+|+++.+++
T Consensus        40 ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~v  118 (398)
T PRK13656         40 GPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEIK  118 (398)
T ss_pred             CCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHH
Confidence            36999999999999999  89999 999999888854321110           11112222234567889999999988


Q ss_pred             HHHhC-------CCCEEEEccccCCCCCC---------CCc----c-c---------------------c-chhhhHHHH
Q 025755           72 CAATA-------GCTGVFHVACPVPVGKV---------PNP----E-V---------------------Q-LIDPAVVGT  108 (248)
Q Consensus        72 ~~~~~-------~id~vi~~ag~~~~~~~---------~~~----~-~---------------------~-~~~~n~~g~  108 (248)
                      +++++       ++|+||||+|..+..+.         .++    . .                     + -..++++|.
T Consensus       119 ~~lie~I~e~~G~IDiLVnSaA~~~r~~p~~g~~~~s~lKpi~~~~~~~~~d~~~~~i~~~s~~~~~~~ei~~Tv~vMgg  198 (398)
T PRK13656        119 QKVIELIKQDLGQVDLVVYSLASPRRTDPKTGEVYRSVLKPIGEPYTGKTLDTDKDVIIEVTVEPATEEEIADTVKVMGG  198 (398)
T ss_pred             HHHHHHHHHhcCCCCEEEECCccCCCCCcccCceeecccccccccccCCcccccccceeEEEEeeCCHHHHHHHHHhhcc
Confidence            87765       58999999997643220         000    0 0                     0 012334444


Q ss_pred             HHHHH---HHHhc----CCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccccchHHHHHHHHHHH----HHHHH
Q 025755          109 KNVLN---SCVKA----KVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAKTIAEIQ----ALEYA  177 (248)
Q Consensus       109 ~~~~~---~~~~~----~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~l----~~~~~  177 (248)
                      .....   +....    ...++|-+|..+.-...|.+-                   .+.=|.+|+.-|..    +.+++
T Consensus       199 edw~~Wi~al~~a~lla~g~~~va~TY~G~~~t~p~Y~-------------------~g~mG~AKa~LE~~~r~La~~L~  259 (398)
T PRK13656        199 EDWELWIDALDEAGVLAEGAKTVAYSYIGPELTHPIYW-------------------DGTIGKAKKDLDRTALALNEKLA  259 (398)
T ss_pred             chHHHHHHHHHhcccccCCcEEEEEecCCcceeecccC-------------------CchHHHHHHHHHHHHHHHHHHhh
Confidence            22222   22222    336888887755333222210                   01147899655544    45555


Q ss_pred             HhCCccEEEEccCeeecCCCC
Q 025755          178 KRGELDIVTVCPSIVIGPMLQ  198 (248)
Q Consensus       178 ~~~~i~v~~vrpg~i~g~~~~  198 (248)
                      +. |+|+|++.+|.+.+.-..
T Consensus       260 ~~-giran~i~~g~~~T~Ass  279 (398)
T PRK13656        260 AK-GGDAYVSVLKAVVTQASS  279 (398)
T ss_pred             hc-CCEEEEEecCcccchhhh
Confidence            44 599999999999986443

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=99.37  E-value=1.5e-12  Score=102.16  Aligned_cols=176  Identities=21%  Similarity=0.264  Sum_probs=131.0

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcC-----CCCCeEEEEccCCCHHHHHHHhC--CC
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEG-----ASENLQLFKTDLLDYEALCAATA--GC   78 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~~Di~d~~~~~~~~~--~i   78 (248)
                      .|+.||||-||-=|+.+++-|+..||+|.++.|..+...-...+.+-.     .......+.+|++|...+.+++.  +.
T Consensus        28 rkvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~ikP  107 (376)
T KOG1372|consen   28 RKVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTIKP  107 (376)
T ss_pred             ceEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhccCc
Confidence            368999999999999999999999999999988765554444443322     23567899999999999999987  45


Q ss_pred             CEEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCC---CEEEEEeccceeccCCCCCCCCccCCCCCCchhhh
Q 025755           79 TGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKV---KRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFC  155 (248)
Q Consensus        79 d~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~---~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~  155 (248)
                      +-|+|.|+.....-+.+-++-+-++...|+..++++.+..+.   -++-..|+ +..||...   ..|-.|..|+.|   
T Consensus       108 tEiYnLaAQSHVkvSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~VrfYQAst-SElyGkv~---e~PQsE~TPFyP---  180 (376)
T KOG1372|consen  108 TEVYNLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIRACRLTEKVRFYQAST-SELYGKVQ---EIPQSETTPFYP---  180 (376)
T ss_pred             hhhhhhhhhcceEEEeecccceeeccchhhhhHHHHHHhcCcccceeEEeccc-Hhhccccc---CCCcccCCCCCC---
Confidence            789999998766544444456678889999999999987743   36666666 45777543   566778888776   


Q ss_pred             ccccchHHHHHHHHHHHHHHHHHhCCccEEEEccCeeec
Q 025755          156 KATENYYCLAKTIAEIQALEYAKRGELDIVTVCPSIVIG  194 (248)
Q Consensus       156 ~~~~~~Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g  194 (248)
                         .++|+.+|..+-.+...|.+.+++   -.|-|.++.
T Consensus       181 ---RSPYa~aKmy~~WivvNyREAYnm---fAcNGILFN  213 (376)
T KOG1372|consen  181 ---RSPYAAAKMYGYWIVVNYREAYNM---FACNGILFN  213 (376)
T ss_pred             ---CChhHHhhhhheEEEEEhHHhhcc---eeeccEeec
Confidence               455999998887777777776643   234444443

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=99.36  E-value=1.4e-11  Score=92.04  Aligned_cols=160  Identities=16%  Similarity=0.105  Sum_probs=125.3

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCC--CeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEE
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKG--YMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGV   81 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~v   81 (248)
                      ++|+.++|.||||-.|+.+.+.+++.+  .+|+++.|...-.        ......+.....|....+++...+++.|+.
T Consensus        16 mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d--------~at~k~v~q~~vDf~Kl~~~a~~~qg~dV~   87 (238)
T KOG4039|consen   16 MQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPD--------PATDKVVAQVEVDFSKLSQLATNEQGPDVL   87 (238)
T ss_pred             hhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCC--------ccccceeeeEEechHHHHHHHhhhcCCceE
Confidence            578999999999999999999999988  4899988874210        111345667778988888888889999999


Q ss_pred             EEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccccch
Q 025755           82 FHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENY  161 (248)
Q Consensus        82 i~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~  161 (248)
                      +.+-|......   ..+.++++...-...+++++++.|++.|+.+||.++-. +..                      -.
T Consensus        88 FcaLgTTRgka---GadgfykvDhDyvl~~A~~AKe~Gck~fvLvSS~GAd~-sSr----------------------Fl  141 (238)
T KOG4039|consen   88 FCALGTTRGKA---GADGFYKVDHDYVLQLAQAAKEKGCKTFVLVSSAGADP-SSR----------------------FL  141 (238)
T ss_pred             EEeeccccccc---ccCceEeechHHHHHHHHHHHhCCCeEEEEEeccCCCc-ccc----------------------ee
Confidence            99988765432   23667888888889999999999999999999966432 211                      11


Q ss_pred             HHHHHHHHHHHHHHHHHhCCccEEEEccCeeecCCCCCC
Q 025755          162 YCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPT  200 (248)
Q Consensus       162 Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~  200 (248)
                      |-..|...|.-+.++.-   -++.++|||.+.+.+....
T Consensus       142 Y~k~KGEvE~~v~eL~F---~~~~i~RPG~ll~~R~esr  177 (238)
T KOG4039|consen  142 YMKMKGEVERDVIELDF---KHIIILRPGPLLGERTESR  177 (238)
T ss_pred             eeeccchhhhhhhhccc---cEEEEecCcceeccccccc
Confidence            88899989988887753   3579999999999876553

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.36  E-value=3.7e-11  Score=98.96  Aligned_cols=148  Identities=23%  Similarity=0.259  Sum_probs=108.7

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEEccc
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFHVAC   86 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~~ag   86 (248)
                      ++|+||||||++|++++++|+++|++|.+..|+.......     .   ..+.+...|+.+...+...++++|.++++.+
T Consensus         1 ~~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~-----~---~~v~~~~~d~~~~~~l~~a~~G~~~~~~i~~   72 (275)
T COG0702           1 MKILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAAL-----A---GGVEVVLGDLRDPKSLVAGAKGVDGVLLISG   72 (275)
T ss_pred             CeEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhh-----c---CCcEEEEeccCCHhHHHHHhccccEEEEEec
Confidence            4799999999999999999999999999999987532111     1   5789999999999999999999999999987


Q ss_pred             cCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccccchHHHHH
Q 025755           87 PVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAK  166 (248)
Q Consensus        87 ~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK  166 (248)
                      ... ...     ...........+..+.+. .+..+++++|+.......                       ...|..+|
T Consensus        73 ~~~-~~~-----~~~~~~~~~~~~~a~~a~-~~~~~~~~~s~~~~~~~~-----------------------~~~~~~~~  122 (275)
T COG0702          73 LLD-GSD-----AFRAVQVTAVVRAAEAAG-AGVKHGVSLSVLGADAAS-----------------------PSALARAK  122 (275)
T ss_pred             ccc-ccc-----chhHHHHHHHHHHHHHhc-CCceEEEEeccCCCCCCC-----------------------ccHHHHHH
Confidence            654 211     122333444444555444 456788888875532211                       12299999


Q ss_pred             HHHHHHHHHHHHhCCccEEEEccCeeecCC
Q 025755          167 TIAEIQALEYAKRGELDIVTVCPSIVIGPM  196 (248)
Q Consensus       167 ~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~  196 (248)
                      ..+|.+....    +++.+.+||..++...
T Consensus       123 ~~~e~~l~~s----g~~~t~lr~~~~~~~~  148 (275)
T COG0702         123 AAVEAALRSS----GIPYTTLRRAAFYLGA  148 (275)
T ss_pred             HHHHHHHHhc----CCCeEEEecCeeeecc
Confidence            9999888753    4888999977776654

>PTZ00325 malate dehydrogenase; Provisional

Probab=99.35  E-value=1.1e-11  Score=103.70  Aligned_cols=179  Identities=15%  Similarity=-0.012  Sum_probs=123.0

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCC--CeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEE
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKG--YMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGV   81 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~v   81 (248)
                      ++|++|.|||++|.||+.++..|+..+  .++++++++..+.....+..   ...  .....+.+|..++.+.++++|+|
T Consensus         6 ~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~~~g~a~Dl~~---~~~--~~~v~~~td~~~~~~~l~gaDvV   80 (321)
T PTZ00325          6 LKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVGAPGVAADLSH---IDT--PAKVTGYADGELWEKALRGADLV   80 (321)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCCCcccccchhh---cCc--CceEEEecCCCchHHHhCCCCEE
Confidence            578999999999999999999998655  68999998432221111111   111  22344566655566788999999


Q ss_pred             EEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccccch
Q 025755           82 FHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENY  161 (248)
Q Consensus        82 i~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~  161 (248)
                      |++||.....  ...+.+.+..|+....++++++.+.+.+++|+++|-.. ....... ...+.+.....+      ...
T Consensus        81 VitaG~~~~~--~~tR~dll~~N~~i~~~i~~~i~~~~~~~iviv~SNPv-dv~~~~~-~~~~~~~sg~p~------~~v  150 (321)
T PTZ00325         81 LICAGVPRKP--GMTRDDLFNTNAPIVRDLVAAVASSAPKAIVGIVSNPV-NSTVPIA-AETLKKAGVYDP------RKL  150 (321)
T ss_pred             EECCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcH-HHHHHHH-HhhhhhccCCCh------hhe
Confidence            9999975432  23457789999999999999999999999999998432 2110000 001112222222      234


Q ss_pred             HHHHHHHHHHHHHHHHHhCCccEEEEccCeeecCCCC
Q 025755          162 YCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQ  198 (248)
Q Consensus       162 Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~  198 (248)
                      ||.+-.-+-++...++++.++....|+ ++|.|++..
T Consensus       151 iG~g~LDs~R~r~~la~~l~v~~~~V~-~~VlGeHGd  186 (321)
T PTZ00325        151 FGVTTLDVVRARKFVAEALGMNPYDVN-VPVVGGHSG  186 (321)
T ss_pred             eechhHHHHHHHHHHHHHhCcChhheE-EEEEeecCC
Confidence            887766777788888888889888888 899998766

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=99.32  E-value=5.3e-11  Score=101.34  Aligned_cols=168  Identities=26%  Similarity=0.263  Sum_probs=105.3

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCH-HHHHHHhCC----C
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDY-EALCAATAG----C   78 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~-~~~~~~~~~----i   78 (248)
                      .+.++|+|+||||.+|+.+++.|+++|+.|.+..|+.++..... . ..........+..|.... +.+..+.+.    .
T Consensus        77 ~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~-~-~~~~d~~~~~v~~~~~~~~d~~~~~~~~~~~~~  154 (411)
T KOG1203|consen   77 KKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLL-G-VFFVDLGLQNVEADVVTAIDILKKLVEAVPKGV  154 (411)
T ss_pred             CCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhh-c-ccccccccceeeeccccccchhhhhhhhccccc
Confidence            45689999999999999999999999999999999985332221 1 111122334444444332 233333332    3


Q ss_pred             CEEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccc
Q 025755           79 TGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKAT  158 (248)
Q Consensus        79 d~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~  158 (248)
                      .+++-++|..+...   +...-.++...|+.|++++|+..|++++|++||...-..+..  .        +....     
T Consensus       155 ~~v~~~~ggrp~~e---d~~~p~~VD~~g~knlvdA~~~aGvk~~vlv~si~~~~~~~~--~--------~~~~~-----  216 (411)
T KOG1203|consen  155 VIVIKGAGGRPEEE---DIVTPEKVDYEGTKNLVDACKKAGVKRVVLVGSIGGTKFNQP--P--------NILLL-----  216 (411)
T ss_pred             eeEEecccCCCCcc---cCCCcceecHHHHHHHHHHHHHhCCceEEEEEeecCcccCCC--c--------hhhhh-----
Confidence            46666666544321   123345778899999999999999999999998664322210  0        00000     


Q ss_pred             cchHHHHHHHHHHHHHHHHHhCCccEEEEccCeeecC
Q 025755          159 ENYYCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGP  195 (248)
Q Consensus       159 ~~~Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~  195 (248)
                      ...+-.+    +.++..+..+.+++..+||||...-+
T Consensus       217 ~~~~~~~----k~~~e~~~~~Sgl~ytiIR~g~~~~~  249 (411)
T KOG1203|consen  217 NGLVLKA----KLKAEKFLQDSGLPYTIIRPGGLEQD  249 (411)
T ss_pred             hhhhhHH----HHhHHHHHHhcCCCcEEEeccccccC
Confidence            0002233    34444555566799999999987764

>KOG2774 consensus NAD dependent epimerase [General function prediction only]

Probab=99.28  E-value=1.7e-11  Score=95.72  Aligned_cols=192  Identities=19%  Similarity=0.153  Sum_probs=129.2

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHC-CC-eEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC--CCCE
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLK-GY-MVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA--GCTG   80 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~-g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~--~id~   80 (248)
                      +..+|||||+-|-+|..++..|-.. |. .|++.+.-+..   +..      -..-.++..|+.|...+++.+-  .+|-
T Consensus        43 ~~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp---~~V------~~~GPyIy~DILD~K~L~eIVVn~RIdW  113 (366)
T KOG2774|consen   43 KAPRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPP---ANV------TDVGPYIYLDILDQKSLEEIVVNKRIDW  113 (366)
T ss_pred             CCCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCc---hhh------cccCCchhhhhhccccHHHhhcccccce
Confidence            3468999999999999999888754 54 45554443321   110      1233577899999888888763  6999


Q ss_pred             EEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccccc
Q 025755           81 VFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATEN  160 (248)
Q Consensus        81 vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~  160 (248)
                      +||.++..+.- .+.+.....++|+.|..|+++.+++.+. ++..-|+++++.+..   +..|-+.-      ...+|..
T Consensus       114 L~HfSALLSAv-GE~NVpLA~~VNI~GvHNil~vAa~~kL-~iFVPSTIGAFGPtS---PRNPTPdl------tIQRPRT  182 (366)
T KOG2774|consen  114 LVHFSALLSAV-GETNVPLALQVNIRGVHNILQVAAKHKL-KVFVPSTIGAFGPTS---PRNPTPDL------TIQRPRT  182 (366)
T ss_pred             eeeHHHHHHHh-cccCCceeeeecchhhhHHHHHHHHcCe-eEeecccccccCCCC---CCCCCCCe------eeecCce
Confidence            99998864321 1223345679999999999999999986 555566766655432   11111111      2345567


Q ss_pred             hHHHHHHHHHHHHHHHHHhCCccEEEEccCeeecCCCC---CCCCccHHHHHHHHcCCC
Q 025755          161 YYCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQ---PTINTSSLLLLGFLKGFF  216 (248)
Q Consensus       161 ~Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~---~~~~~~~~~~~~~~~~~~  216 (248)
                      .||.||.-+|-+.+.+..+.|+.+.+.|.+.+......   ..+.....+-....+|++
T Consensus       183 IYGVSKVHAEL~GEy~~hrFg~dfr~~rfPg~is~~~pgggttdya~A~f~~Al~~gk~  241 (366)
T KOG2774|consen  183 IYGVSKVHAELLGEYFNHRFGVDFRSMRFPGIISATKPGGGTTDYAIAIFYDALQKGKH  241 (366)
T ss_pred             eechhHHHHHHHHHHHHhhcCccceecccCcccccCCCCCCcchhHHHHHHHHHHcCCc
Confidence            79999999999999999888999999998776653222   123344445455556653

>PLN00106 malate dehydrogenase

Probab=99.18  E-value=1.2e-10  Score=97.59  Aligned_cols=175  Identities=15%  Similarity=0.032  Sum_probs=119.3

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCC--eEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEE
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGY--MVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFH   83 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~   83 (248)
                      .+||.|||++|.||+.++..|+.++.  ++++++++..+.....+..   ...  .....++.+.+++...++++|+|||
T Consensus        18 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~~~g~a~Dl~~---~~~--~~~i~~~~~~~d~~~~l~~aDiVVi   92 (323)
T PLN00106         18 GFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIANTPGVAADVSH---INT--PAQVRGFLGDDQLGDALKGADLVII   92 (323)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCCCCeeEchhhh---CCc--CceEEEEeCCCCHHHHcCCCCEEEE
Confidence            47999999999999999999997664  7999998762221111111   011  1123354445567788999999999


Q ss_pred             ccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccccchHH
Q 025755           84 VACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYC  163 (248)
Q Consensus        84 ~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~  163 (248)
                      +||.....  ...+.+.++.|+...+++.+.+.+.+..++|+++|--. -...... ...+.....      ..+...||
T Consensus        93 tAG~~~~~--g~~R~dll~~N~~i~~~i~~~i~~~~p~aivivvSNPv-D~~~~i~-t~~~~~~s~------~p~~~viG  162 (323)
T PLN00106         93 PAGVPRKP--GMTRDDLFNINAGIVKTLCEAVAKHCPNALVNIISNPV-NSTVPIA-AEVLKKAGV------YDPKKLFG  162 (323)
T ss_pred             eCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCCc-cccHHHH-HHHHHHcCC------CCcceEEE
Confidence            99985442  24457889999999999999999999888888887322 1000000 000001111      12234599


Q ss_pred             HHHHHHHHHHHHHHHhCCccEEEEccCeeecCC
Q 025755          164 LAKTIAEIQALEYAKRGELDIVTVCPSIVIGPM  196 (248)
Q Consensus       164 ~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~  196 (248)
                      .++.-++++...++++.++....| -++|+|++
T Consensus       163 ~~~LDs~Rl~~~lA~~lgv~~~~V-~~~ViGeH  194 (323)
T PLN00106        163 VTTLDVVRANTFVAEKKGLDPADV-DVPVVGGH  194 (323)
T ss_pred             EecchHHHHHHHHHHHhCCChhhe-EEEEEEeC
Confidence            999899999999999988887777 56788877

>PRK08309 short chain dehydrogenase; Provisional

Probab=99.15  E-value=5.5e-10  Score=86.04  Aligned_cols=101  Identities=17%  Similarity=0.136  Sum_probs=75.3

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCC-------C
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGC-------T   79 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~i-------d   79 (248)
                      |+++||||+|++| ++++.|+++|++|++.+|+.... ......+. ...++.++.+|++|.+++.++++++       |
T Consensus         1 m~vlVtGGtG~gg-~la~~L~~~G~~V~v~~R~~~~~-~~l~~~l~-~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id   77 (177)
T PRK08309          1 MHALVIGGTGMLK-RVSLWLCEKGFHVSVIARREVKL-ENVKREST-TPESITPLPLDYHDDDALKLAIKSTIEKNGPFD   77 (177)
T ss_pred             CEEEEECcCHHHH-HHHHHHHHCcCEEEEEECCHHHH-HHHHHHhh-cCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCe
Confidence            4799999996555 59999999999999999876321 12222122 2357888999999999999887643       3


Q ss_pred             EEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCC----EEEEEec
Q 025755           80 GVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVK----RVVVVSS  128 (248)
Q Consensus        80 ~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~----~iV~vSS  128 (248)
                      .+|                  ..++..++.++.++|++.+++    +++++=.
T Consensus        78 ~lv------------------~~vh~~~~~~~~~~~~~~gv~~~~~~~~h~~g  112 (177)
T PRK08309         78 LAV------------------AWIHSSAKDALSVVCRELDGSSETYRLFHVLG  112 (177)
T ss_pred             EEE------------------EeccccchhhHHHHHHHHccCCCCceEEEEeC
Confidence            333                  345566788999999999988    8999854

>KOG4288 consensus Predicted oxidoreductase [General function prediction only]

Probab=99.09  E-value=3.9e-10  Score=87.77  Aligned_cols=157  Identities=17%  Similarity=0.077  Sum_probs=117.2

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEEccc
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFHVAC   86 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~~ag   86 (248)
                      .+.++.|+.++.|+++++.....++.|-++.|+..+.      .+..+.+.+.++.+|.+..+-.+....+...++.++|
T Consensus        53 e~tlvlggnpfsgs~vlk~A~~vv~svgilsen~~k~------~l~sw~~~vswh~gnsfssn~~k~~l~g~t~v~e~~g  126 (283)
T KOG4288|consen   53 EWTLVLGGNPFSGSEVLKNATNVVHSVGILSENENKQ------TLSSWPTYVSWHRGNSFSSNPNKLKLSGPTFVYEMMG  126 (283)
T ss_pred             HHHhhhcCCCcchHHHHHHHHhhceeeeEeecccCcc------hhhCCCcccchhhccccccCcchhhhcCCcccHHHhc
Confidence            4678999999999999999999999999999986421      1222356788889998876656666667888888887


Q ss_pred             cCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccccchHHHHH
Q 025755           87 PVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAK  166 (248)
Q Consensus        87 ~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK  166 (248)
                      ....      ...+..+|-....+..+++.+.++++++|||-..  ++-+..-+                   ..|-.+|
T Consensus       127 gfgn------~~~m~~ing~ani~a~kaa~~~gv~~fvyISa~d--~~~~~~i~-------------------rGY~~gK  179 (283)
T KOG4288|consen  127 GFGN------IILMDRINGTANINAVKAAAKAGVPRFVYISAHD--FGLPPLIP-------------------RGYIEGK  179 (283)
T ss_pred             Cccc------hHHHHHhccHhhHHHHHHHHHcCCceEEEEEhhh--cCCCCccc-------------------hhhhccc
Confidence            6543      2456678888888999999999999999998632  22221111                   1388999


Q ss_pred             HHHHHHHHHHHHhCCccEEEEccCeeecCCCCC
Q 025755          167 TIAEIQALEYAKRGELDIVTVCPSIVIGPMLQP  199 (248)
Q Consensus       167 ~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~  199 (248)
                      ..+|.-..   +.++.|-.++|||.+||.+.-.
T Consensus       180 R~AE~Ell---~~~~~rgiilRPGFiyg~R~v~  209 (283)
T KOG4288|consen  180 REAEAELL---KKFRFRGIILRPGFIYGTRNVG  209 (283)
T ss_pred             hHHHHHHH---HhcCCCceeeccceeecccccC
Confidence            88886544   3445888999999999986543

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=98.97  E-value=2.1e-08  Score=84.59  Aligned_cols=175  Identities=18%  Similarity=0.064  Sum_probs=103.5

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCC-------CeEEEEEcCCCch-hhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCC
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKG-------YMVHGTVRDPCDE-KNAHLKKLEGASENLQLFKTDLLDYEALCAATAGC   78 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g-------~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~i   78 (248)
                      .+|+||||+|+||++++..|+..+       .+|++++++.... .......+.   +-......|+....++.+.++++
T Consensus         3 ~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~---d~~~~~~~~~~~~~~~~~~l~~a   79 (325)
T cd01336           3 IRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQ---DCAFPLLKSVVATTDPEEAFKDV   79 (325)
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehh---hccccccCCceecCCHHHHhCCC
Confidence            589999999999999999999844       5899999865311 000000000   00001123555456677888999


Q ss_pred             CEEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhc-C-CCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhc
Q 025755           79 TGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKA-K-VKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCK  156 (248)
Q Consensus        79 d~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~-~-~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~  156 (248)
                      |+|||+||.....  ...-.+.++.|+.-...+.+.+.+. . -..+|.+|....+...       .+-+..+..+.   
T Consensus        80 DiVI~tAG~~~~~--~~~R~~l~~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~-------~~~k~~~~~~~---  147 (325)
T cd01336          80 DVAILVGAMPRKE--GMERKDLLKANVKIFKEQGEALDKYAKKNVKVLVVGNPANTNAL-------ILLKYAPSIPK---  147 (325)
T ss_pred             CEEEEeCCcCCCC--CCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEecCcHHHHHH-------HHHHHcCCCCH---
Confidence            9999999986542  1222678899999999999888887 3 3456666653321110       00000000000   


Q ss_pred             cccchHHHHHHHHHHHHHHHHHhCCccEEEEccCeeecCCCC
Q 025755          157 ATENYYCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQ  198 (248)
Q Consensus       157 ~~~~~Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~  198 (248)
                        ...-..+..-+-++...++++.+++...|+-..|.|.+..
T Consensus       148 --~~ig~gt~LDs~R~r~~la~~l~v~~~~v~~~~V~GeHG~  187 (325)
T cd01336         148 --ENFTALTRLDHNRAKSQIALKLGVPVSDVKNVIIWGNHSS  187 (325)
T ss_pred             --HHEEeeehHHHHHHHHHHHHHhCcChhhceEeEEEEcCCC
Confidence              0001112334556666677776777777776677776544

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=98.95  E-value=6.4e-09  Score=88.57  Aligned_cols=77  Identities=22%  Similarity=0.184  Sum_probs=64.3

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCC-CeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEEc
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKG-YMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFHV   84 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~~   84 (248)
                      |++|+|.|+ |+||+.+++.|+++| .+|++.+|+..+.... ...   ...+++..++|+.|.+.+.+++++.|+|||+
T Consensus         1 m~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i-~~~---~~~~v~~~~vD~~d~~al~~li~~~d~VIn~   75 (389)
T COG1748           1 MMKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARI-AEL---IGGKVEALQVDAADVDALVALIKDFDLVINA   75 (389)
T ss_pred             CCcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHH-Hhh---ccccceeEEecccChHHHHHHHhcCCEEEEe
Confidence            579999999 999999999999999 9999999997532221 111   1248999999999999999999999999999


Q ss_pred             ccc
Q 025755           85 ACP   87 (248)
Q Consensus        85 ag~   87 (248)
                      +.+
T Consensus        76 ~p~   78 (389)
T COG1748          76 APP   78 (389)
T ss_pred             CCc
Confidence            954

>PRK09620 hypothetical protein; Provisional

Probab=98.86  E-value=9e-09  Score=82.43  Aligned_cols=82  Identities=16%  Similarity=0.122  Sum_probs=57.0

Q ss_pred             CCCcEEEEEcCc----------------cHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCC
Q 025755            4 EDKERVCVTGAG----------------GYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLD   67 (248)
Q Consensus         4 l~~k~vlVtG~~----------------g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d   67 (248)
                      |+||+|+||+|.                |++|+++++.|+++|++|+++++...... .   ... ....+..+.+|...
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~-~---~~~-~~~~~~~V~s~~d~   75 (229)
T PRK09620          1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKP-N---DIN-NQLELHPFEGIIDL   75 (229)
T ss_pred             CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCC-c---ccC-CceeEEEEecHHHH
Confidence            578999999886                99999999999999999998875321100 0   000 01223345553333


Q ss_pred             HHHHHHHhC--CCCEEEEccccCCC
Q 025755           68 YEALCAATA--GCTGVFHVACPVPV   90 (248)
Q Consensus        68 ~~~~~~~~~--~id~vi~~ag~~~~   90 (248)
                      .+.+.++++  ++|+|||+|++...
T Consensus        76 ~~~l~~~~~~~~~D~VIH~AAvsD~  100 (229)
T PRK09620         76 QDKMKSIITHEKVDAVIMAAAGSDW  100 (229)
T ss_pred             HHHHHHHhcccCCCEEEECccccce
Confidence            457778774  68999999998653

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=98.83  E-value=2.3e-08  Score=83.22  Aligned_cols=85  Identities=18%  Similarity=0.074  Sum_probs=64.8

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCe-EEEEEcCCC--chhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCC
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYM-VHGTVRDPC--DEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCT   79 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~-V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id   79 (248)
                      .+++|+++|+|+ ||+|++++..|++.|++ |++++|+..  +...+..+.+......+.+..+|+.+.+++...++.+|
T Consensus       123 ~~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~D  201 (289)
T PRK12548        123 DVKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIASSD  201 (289)
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhccCC
Confidence            356899999999 79999999999999986 999999862  22233333343333455667789988888888888899


Q ss_pred             EEEEccccC
Q 025755           80 GVFHVACPV   88 (248)
Q Consensus        80 ~vi~~ag~~   88 (248)
                      +||||..+.
T Consensus       202 ilINaTp~G  210 (289)
T PRK12548        202 ILVNATLVG  210 (289)
T ss_pred             EEEEeCCCC
Confidence            999987543

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=98.82  E-value=3.5e-08  Score=83.10  Aligned_cols=172  Identities=12%  Similarity=0.005  Sum_probs=111.6

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCC-------eEEEEEcCCCc--h--hhHHhhhhc-CCCCCeEEEEccCCCHHHHHH
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGY-------MVHGTVRDPCD--E--KNAHLKKLE-GASENLQLFKTDLLDYEALCA   73 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~-------~V~~~~r~~~~--~--~~~~~~~~~-~~~~~~~~~~~Di~d~~~~~~   73 (248)
                      .++|.|+|++|.+|..++..|+..|.       ++++++.....  .  ....+.... ....++.     ++  .....
T Consensus         2 p~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~-----i~--~~~~~   74 (322)
T cd01338           2 PVRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIV-----IT--DDPNV   74 (322)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceE-----Ee--cCcHH
Confidence            46999999999999999999998774       78888885421  1  111111111 0011222     11  12235


Q ss_pred             HhCCCCEEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcC--CCEEEEEeccceeccCCCCCCCCccCCCCCCc
Q 025755           74 ATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAK--VKRVVVVSSIGAVMLNPNWPKGQVMDEECWSD  151 (248)
Q Consensus        74 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~--~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~  151 (248)
                      .+++.|+||.+||......  ..-.+.++.|..-.+.+.+.+.+..  -..+|.+|-...+....       +-....  
T Consensus        75 ~~~daDivvitaG~~~k~g--~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~-------~~k~sg--  143 (322)
T cd01338          75 AFKDADWALLVGAKPRGPG--MERADLLKANGKIFTAQGKALNDVASRDVKVLVVGNPCNTNALI-------AMKNAP--  143 (322)
T ss_pred             HhCCCCEEEEeCCCCCCCC--CcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecCcHHHHHHH-------HHHHcC--
Confidence            5778999999999754321  2225678999999999999998875  34566665432111100       000000  


Q ss_pred             hhhhccccchHHHHHHHHHHHHHHHHHhCCccEEEEccCeeecCCCC
Q 025755          152 EEFCKATENYYCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQ  198 (248)
Q Consensus       152 ~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~  198 (248)
                         ...+...||.++.-+.++...++++.+++...++..+|+|++..
T Consensus       144 ---~~p~~~ViG~t~LDs~Rl~~~la~~lgv~~~~v~~~~V~GeHG~  187 (322)
T cd01338         144 ---DIPPDNFTAMTRLDHNRAKSQLAKKAGVPVTDVKNMVIWGNHSP  187 (322)
T ss_pred             ---CCChHheEEehHHHHHHHHHHHHHHhCcChhHeEEEEEEeCCcc
Confidence               01112349999999999999999999999999999899999853

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=98.76  E-value=5e-08  Score=76.50  Aligned_cols=82  Identities=20%  Similarity=0.096  Sum_probs=63.2

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEE
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVF   82 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi   82 (248)
                      ++++++++|+||+|++|+.+++.|++.|++|++++|+.++ .....+.+.. ........+|..+.+++..+++++|+||
T Consensus        25 ~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~-~~~l~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~diVi  102 (194)
T cd01078          25 DLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLER-AQKAADSLRA-RFGEGVGAVETSDDAARAAAIKGADVVF  102 (194)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHH-HHHHHHHHHh-hcCCcEEEeeCCCHHHHHHHHhcCCEEE
Confidence            3678999999999999999999999999999999988632 2222222221 1234566788899999999999999999


Q ss_pred             Eccc
Q 025755           83 HVAC   86 (248)
Q Consensus        83 ~~ag   86 (248)
                      ++..
T Consensus       103 ~at~  106 (194)
T cd01078         103 AAGA  106 (194)
T ss_pred             ECCC
Confidence            8764

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=98.74  E-value=5.2e-08  Score=78.25  Aligned_cols=72  Identities=15%  Similarity=0.167  Sum_probs=50.0

Q ss_pred             EEEc-CccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCC--HHHHHHHhCCCCEEEEccc
Q 025755           10 CVTG-AGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLD--YEALCAATAGCTGVFHVAC   86 (248)
Q Consensus        10 lVtG-~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d--~~~~~~~~~~id~vi~~ag   86 (248)
                      .||. +||++|+++++.|+++|++|++++|.....      ..  ...++.++.++..+  .+.+.+.++++|+||||||
T Consensus        19 ~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~------~~--~~~~v~~i~v~s~~~m~~~l~~~~~~~DivIh~AA   90 (229)
T PRK06732         19 GITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAVK------PE--PHPNLSIIEIENVDDLLETLEPLVKDHDVLIHSMA   90 (229)
T ss_pred             eecCccchHHHHHHHHHHHhCCCEEEEEECccccc------CC--CCCCeEEEEEecHHHHHHHHHHHhcCCCEEEeCCc
Confidence            4443 577899999999999999999998754210      00  12356666544332  2456667778999999999


Q ss_pred             cCC
Q 025755           87 PVP   89 (248)
Q Consensus        87 ~~~   89 (248)
                      +..
T Consensus        91 vsd   93 (229)
T PRK06732         91 VSD   93 (229)
T ss_pred             cCC
Confidence            865

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=98.73  E-value=5.3e-08  Score=84.15  Aligned_cols=75  Identities=13%  Similarity=0.030  Sum_probs=59.0

Q ss_pred             CCCcEEEEEcC----------------ccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCC
Q 025755            4 EDKERVCVTGA----------------GGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLD   67 (248)
Q Consensus         4 l~~k~vlVtG~----------------~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d   67 (248)
                      +++|+++||||                +|++|++++++|+++|++|++++++.. .     . .   ..  ....+|+++
T Consensus       186 l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~-~-----~-~---~~--~~~~~dv~~  253 (399)
T PRK05579        186 LAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVN-L-----P-T---PA--GVKRIDVES  253 (399)
T ss_pred             cCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcc-c-----c-C---CC--CcEEEccCC
Confidence            68999999999                778999999999999999999987652 1     0 0   11  134679999


Q ss_pred             HHHHHHHh----CCCCEEEEccccCCC
Q 025755           68 YEALCAAT----AGCTGVFHVACPVPV   90 (248)
Q Consensus        68 ~~~~~~~~----~~id~vi~~ag~~~~   90 (248)
                      .+++.+.+    .++|++|||||+...
T Consensus       254 ~~~~~~~v~~~~~~~DilI~~Aav~d~  280 (399)
T PRK05579        254 AQEMLDAVLAALPQADIFIMAAAVADY  280 (399)
T ss_pred             HHHHHHHHHHhcCCCCEEEEccccccc
Confidence            88777665    368999999998654

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=98.68  E-value=2.2e-07  Score=80.66  Aligned_cols=76  Identities=28%  Similarity=0.437  Sum_probs=57.7

Q ss_pred             EEEEcCccHHHHHHHHHHHHCC-C-eEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEEccc
Q 025755            9 VCVTGAGGYIASWLVKYLLLKG-Y-MVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFHVAC   86 (248)
Q Consensus         9 vlVtG~~g~iG~~~~~~l~~~g-~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~~ag   86 (248)
                      |+|.|+ |++|+.+++.|++++ . +|++.+|+..+.. ...+.+  ...++.++++|+.|.+++.+++++.|+||||++
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~-~~~~~~--~~~~~~~~~~d~~~~~~l~~~~~~~dvVin~~g   76 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAE-RLAEKL--LGDRVEAVQVDVNDPESLAELLRGCDVVINCAG   76 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHH-HHHT----TTTTEEEEE--TTTHHHHHHHHTTSSEEEE-SS
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHH-HHHhhc--cccceeEEEEecCCHHHHHHHHhcCCEEEECCc
Confidence            789999 999999999999986 4 8999999874322 222211  357899999999999999999999999999998


Q ss_pred             cC
Q 025755           87 PV   88 (248)
Q Consensus        87 ~~   88 (248)
                      +.
T Consensus        77 p~   78 (386)
T PF03435_consen   77 PF   78 (386)
T ss_dssp             GG
T ss_pred             cc
Confidence            75

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=98.64  E-value=9.1e-07  Score=74.66  Aligned_cols=162  Identities=19%  Similarity=0.133  Sum_probs=101.2

Q ss_pred             EEEEEcCccHHHHHHHHHHHHCCC-------eEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHH-----------
Q 025755            8 RVCVTGAGGYIASWLVKYLLLKGY-------MVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYE-----------   69 (248)
Q Consensus         8 ~vlVtG~~g~iG~~~~~~l~~~g~-------~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~-----------   69 (248)
                      +|.|+|++|.+|+.++..|+..+.       ++++++++...             +.......|+.|..           
T Consensus         1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~-------------~~a~g~~~Dl~d~~~~~~~~~~~~~   67 (324)
T TIGR01758         1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAM-------------KVLEGVVMELMDCAFPLLDGVVPTH   67 (324)
T ss_pred             CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCcc-------------cccceeEeehhcccchhcCceeccC
Confidence            589999999999999999987553       58888886531             11223334444332           


Q ss_pred             HHHHHhCCCCEEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcC-C-CEEEEEeccceeccC--CCCCCCCccC
Q 025755           70 ALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAK-V-KRVVVVSSIGAVMLN--PNWPKGQVMD  145 (248)
Q Consensus        70 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~-~-~~iV~vSS~~~~~~~--~~~~~~~~~~  145 (248)
                      +....++++|+|||+||.....  ..+..+.++.|+.-.+.+.+.+.+.. . ..+|.+|-..-+...  ....+  ..+
T Consensus        68 ~~~~~~~~aDiVVitAG~~~~~--~~tr~~ll~~N~~i~k~i~~~i~~~~~~~~iiivvsNPvDv~t~v~~~~sg--~~~  143 (324)
T TIGR01758        68 DPAVAFTDVDVAILVGAFPRKE--GMERRDLLSKNVKIFKEQGRALDKLAKKDCKVLVVGNPANTNALVLSNYAP--SIP  143 (324)
T ss_pred             ChHHHhCCCCEEEEcCCCCCCC--CCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeCCcHHHHHHHHHHHcC--CCC
Confidence            3356678899999999975442  23457889999999999999999873 4 455555543211110  00000  000


Q ss_pred             CCCCCchhhhccccchHHHHHHHHHHHHHHHHHhCCccEEEEccCeeecCCCC
Q 025755          146 EECWSDEEFCKATENYYCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQ  198 (248)
Q Consensus       146 e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~  198 (248)
                      ..            ..-..+..-+-++...++++.+++...|+-++|.|.+..
T Consensus       144 ~~------------vig~gt~LDs~R~r~~la~~l~v~~~~V~~~~V~GeHG~  184 (324)
T TIGR01758       144 PK------------NFSALTRLDHNRALAQVAERAGVPVSDVKNVIIWGNHSS  184 (324)
T ss_pred             cc------------eEEEeeehHHHHHHHHHHHHhCCChhhceEeEEEECCCC
Confidence            00            001112234566677777777788777777788887544

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>PRK05086 malate dehydrogenase; Provisional

Probab=98.55  E-value=1.1e-06  Score=73.78  Aligned_cols=115  Identities=19%  Similarity=0.101  Sum_probs=78.3

Q ss_pred             cEEEEEcCccHHHHHHHHHHHH---CCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEE
Q 025755            7 ERVCVTGAGGYIASWLVKYLLL---KGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFH   83 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~---~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~   83 (248)
                      |+|+|+||+|+||++++..|..   .++++++++++.. .....+ .+... .....+.+  .+.+++.+.++++|+||.
T Consensus         1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~-~~g~al-Dl~~~-~~~~~i~~--~~~~d~~~~l~~~DiVIi   75 (312)
T PRK05086          1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPV-TPGVAV-DLSHI-PTAVKIKG--FSGEDPTPALEGADVVLI   75 (312)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCC-Ccceeh-hhhcC-CCCceEEE--eCCCCHHHHcCCCCEEEE
Confidence            5899999999999999988854   3467888888642 110001 11111 11112222  223445566788999999


Q ss_pred             ccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEec
Q 025755           84 VACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSS  128 (248)
Q Consensus        84 ~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS  128 (248)
                      ++|.....  ...-.+.+..|.....++++.+.+.+.+++|.+.|
T Consensus        76 taG~~~~~--~~~R~dll~~N~~i~~~ii~~i~~~~~~~ivivvs  118 (312)
T PRK05086         76 SAGVARKP--GMDRSDLFNVNAGIVKNLVEKVAKTCPKACIGIIT  118 (312)
T ss_pred             cCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence            99975432  22336789999999999999999998888888876

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=98.55  E-value=1.6e-07  Score=75.30  Aligned_cols=68  Identities=13%  Similarity=0.073  Sum_probs=48.3

Q ss_pred             EEEc-CccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHh-------CCCCEE
Q 025755           10 CVTG-AGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAAT-------AGCTGV   81 (248)
Q Consensus        10 lVtG-~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~-------~~id~v   81 (248)
                      .||. ++|+||+++++.|+++|++|+++++...      ..   . ..   ...+|+.+.+++..++       ..+|++
T Consensus        18 ~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~------l~---~-~~---~~~~Dv~d~~s~~~l~~~v~~~~g~iDiL   84 (227)
T TIGR02114        18 SITNHSTGHLGKIITETFLSAGHEVTLVTTKRA------LK---P-EP---HPNLSIREIETTKDLLITLKELVQEHDIL   84 (227)
T ss_pred             eecCCcccHHHHHHHHHHHHCCCEEEEEcChhh------cc---c-cc---CCcceeecHHHHHHHHHHHHHHcCCCCEE
Confidence            4444 4889999999999999999999875321      00   0 00   1347888877766554       358999


Q ss_pred             EEccccCCC
Q 025755           82 FHVACPVPV   90 (248)
Q Consensus        82 i~~ag~~~~   90 (248)
                      |||||+...
T Consensus        85 VnnAgv~d~   93 (227)
T TIGR02114        85 IHSMAVSDY   93 (227)
T ss_pred             EECCEeccc
Confidence            999997653

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>cd00704 MDH Malate dehydrogenase

Probab=98.45  E-value=2.8e-06  Score=71.69  Aligned_cols=163  Identities=16%  Similarity=0.058  Sum_probs=98.3

Q ss_pred             EEEEEcCccHHHHHHHHHHHHCCC-------eEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCH-----------H
Q 025755            8 RVCVTGAGGYIASWLVKYLLLKGY-------MVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDY-----------E   69 (248)
Q Consensus         8 ~vlVtG~~g~iG~~~~~~l~~~g~-------~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~-----------~   69 (248)
                      +|.||||+|.||+.++..|+..|.       ++++++++...             +.......|+.|.           .
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~-------------~~~~g~~~Dl~d~~~~~~~~~~i~~   68 (323)
T cd00704           2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAM-------------KALEGVVMELQDCAFPLLKGVVITT   68 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCcc-------------CccceeeeehhhhcccccCCcEEec
Confidence            799999999999999999987652       58888886520             1122233333332           2


Q ss_pred             HHHHHhCCCCEEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcC-C-CEEEEEeccceeccCCCCCCCCccCCC
Q 025755           70 ALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAK-V-KRVVVVSSIGAVMLNPNWPKGQVMDEE  147 (248)
Q Consensus        70 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~-~-~~iV~vSS~~~~~~~~~~~~~~~~~e~  147 (248)
                      .....++++|+|||.||.....  ...-.+.++.|..-.+.+.+.+.+.. . ..+|.+|-..-+....       +-+.
T Consensus        69 ~~~~~~~~aDiVVitAG~~~~~--g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~-------~~k~  139 (323)
T cd00704          69 DPEEAFKDVDVAILVGAFPRKP--GMERADLLRKNAKIFKEQGEALNKVAKPTVKVLVVGNPANTNALI-------ALKN  139 (323)
T ss_pred             ChHHHhCCCCEEEEeCCCCCCc--CCcHHHHHHHhHHHHHHHHHHHHHhCCCCeEEEEeCCcHHHHHHH-------HHHH
Confidence            4457788999999999975432  12235788999999999999998883 4 4555555322111100       0000


Q ss_pred             CCC-chhhhccccchHHHHHHHHHHHHHHHHHhCCccEEEEccCeeecCCCC
Q 025755          148 CWS-DEEFCKATENYYCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQ  198 (248)
Q Consensus       148 ~~~-~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~  198 (248)
                      ... .+      ...-+.+..-+-++...++++.+++...|+=.+|.|.+..
T Consensus       140 sg~~p~------~~vig~t~LDs~R~r~~la~~l~v~~~~V~~~~V~GeHG~  185 (323)
T cd00704         140 APNLPP------KNFTALTRLDHNRAKAQVARKLGVRVSDVKNVIIWGNHSN  185 (323)
T ss_pred             cCCCCH------HHEEEeeHHHHHHHHHHHHHHhCcCHHHceeeeEEecccC
Confidence            000 00      0012334445566666677766666666655567776543

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=98.45  E-value=6.8e-07  Score=74.19  Aligned_cols=82  Identities=15%  Similarity=0.212  Sum_probs=66.3

Q ss_pred             EEEEEcCccHHHHHHHHHHHH----CCCeEEEEEcCCCchhhHHhhhhcCCC----CCeEEEEccCCCHHHHHHHhCCCC
Q 025755            8 RVCVTGAGGYIASWLVKYLLL----KGYMVHGTVRDPCDEKNAHLKKLEGAS----ENLQLFKTDLLDYEALCAATAGCT   79 (248)
Q Consensus         8 ~vlVtG~~g~iG~~~~~~l~~----~g~~V~~~~r~~~~~~~~~~~~~~~~~----~~~~~~~~Di~d~~~~~~~~~~id   79 (248)
                      -++|-||+||-|..+++++++    .+...-+.+|+..+ ..+.+++.....    ....++.+|..|++++.+.++...
T Consensus         7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~K-L~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak~~~   85 (423)
T KOG2733|consen    7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKK-LQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAKQAR   85 (423)
T ss_pred             eEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHH-HHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHhhhE
Confidence            589999999999999999999    78888899999854 334444433322    223388999999999999999999


Q ss_pred             EEEEccccCCC
Q 025755           80 GVFHVACPVPV   90 (248)
Q Consensus        80 ~vi~~ag~~~~   90 (248)
                      +|+||+|+...
T Consensus        86 vivN~vGPyR~   96 (423)
T KOG2733|consen   86 VIVNCVGPYRF   96 (423)
T ss_pred             EEEecccccee
Confidence            99999998764

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=98.43  E-value=1.1e-06  Score=75.76  Aligned_cols=104  Identities=13%  Similarity=0.035  Sum_probs=71.2

Q ss_pred             CCCcEEEEEcC---------------c-cHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCC
Q 025755            4 EDKERVCVTGA---------------G-GYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLD   67 (248)
Q Consensus         4 l~~k~vlVtG~---------------~-g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d   67 (248)
                      +++|+++||||               + |.+|.+++++|..+|++|+++.+.....       .   ...  ....|+.+
T Consensus       183 ~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~-------~---~~~--~~~~~v~~  250 (390)
T TIGR00521       183 LEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLL-------T---PPG--VKSIKVST  250 (390)
T ss_pred             cCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccC-------C---CCC--cEEEEecc
Confidence            78899999999               3 4599999999999999999988654310       0   112  24578888


Q ss_pred             HHHH-HHHh----CCCCEEEEccccCCCCCC---CCcc---ccchhhhHHHHHHHHHHHHhcC
Q 025755           68 YEAL-CAAT----AGCTGVFHVACPVPVGKV---PNPE---VQLIDPAVVGTKNVLNSCVKAK  119 (248)
Q Consensus        68 ~~~~-~~~~----~~id~vi~~ag~~~~~~~---~~~~---~~~~~~n~~g~~~~~~~~~~~~  119 (248)
                      .+++ +.++    .++|++|+|||+......   ....   ...+..|+.-+-.+++...+..
T Consensus       251 ~~~~~~~~~~~~~~~~D~~i~~Aavsd~~~~~~~~~Ki~~~~~~~~l~L~~~pdil~~l~~~~  313 (390)
T TIGR00521       251 AEEMLEAALNELAKDFDIFISAAAVADFKPKTVFEGKIKKQGEELSLKLVKNPDIIAEVRKIK  313 (390)
T ss_pred             HHHHHHHHHHhhcccCCEEEEccccccccccccccccccccCCceeEEEEeCcHHHHHHHhhC
Confidence            8777 5444    358999999998754321   1111   1234456666677777777653

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>PRK14982 acyl-ACP reductase; Provisional

Probab=98.35  E-value=1.9e-06  Score=72.71  Aligned_cols=74  Identities=26%  Similarity=0.161  Sum_probs=53.1

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHC-C-CeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCE
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLK-G-YMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTG   80 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~-g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~   80 (248)
                      ++++|+|+||||+|+||+.+++.|+++ | .+++++.|+.... .....++         ..+|+.   ++.+++.++|+
T Consensus       152 ~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl-~~La~el---------~~~~i~---~l~~~l~~aDi  218 (340)
T PRK14982        152 DLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERL-QELQAEL---------GGGKIL---SLEEALPEADI  218 (340)
T ss_pred             CcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHH-HHHHHHh---------ccccHH---hHHHHHccCCE
Confidence            367899999999999999999999864 5 5899988875321 1111111         123333   46677889999


Q ss_pred             EEEccccCC
Q 025755           81 VFHVACPVP   89 (248)
Q Consensus        81 vi~~ag~~~   89 (248)
                      |||+++...
T Consensus       219 Vv~~ts~~~  227 (340)
T PRK14982        219 VVWVASMPK  227 (340)
T ss_pred             EEECCcCCc
Confidence            999998744

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.33  E-value=9.3e-06  Score=71.94  Aligned_cols=159  Identities=18%  Similarity=0.110  Sum_probs=89.5

Q ss_pred             CcEEE----EEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEE
Q 025755            6 KERVC----VTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGV   81 (248)
Q Consensus         6 ~k~vl----VtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~v   81 (248)
                      +..++    |+||+|++|.++++.|...|++|+...+.....       ......++..+.+|.+..+....+       
T Consensus        34 ~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~-------~~~~~~~~~~~~~d~~~~~~~~~l-------   99 (450)
T PRK08261         34 GQPLLDGPVLVGGAGRLAEALAALLAGLGYDVVANNDGGLTW-------AAGWGDRFGALVFDATGITDPADL-------   99 (450)
T ss_pred             CCCCCCCceEEccCchhHHHHHHHHhhCCCeeeecCcccccc-------ccCcCCcccEEEEECCCCCCHHHH-------
Confidence            34556    889999999999999999999999876554210       000112333333343322221111       


Q ss_pred             EEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccccch
Q 025755           82 FHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENY  161 (248)
Q Consensus        82 i~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~  161 (248)
                                          ..-......+++.+.  ..++||+++|.....+.   .                     .
T Consensus       100 --------------------~~~~~~~~~~l~~l~--~~griv~i~s~~~~~~~---~---------------------~  133 (450)
T PRK08261        100 --------------------KALYEFFHPVLRSLA--PCGRVVVLGRPPEAAAD---P---------------------A  133 (450)
T ss_pred             --------------------HHHHHHHHHHHHhcc--CCCEEEEEccccccCCc---h---------------------H
Confidence                                000111222233322  34699999986543211   1                     1


Q ss_pred             HHHHHHHHHHHHHHHHHh--CCccEEEEccCeeecCCCCCCCCccHHHHHHHHcCCCCCCCCCchhhhhhhhhcccee
Q 025755          162 YCLAKTIAEIQALEYAKR--GELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKGFFFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       162 Y~~sK~~~e~l~~~~~~~--~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                      |+.+|+....+.+.++.+  .+++++.+.|+.    ..       ...+.....  ++.++...|++|+++.++++..
T Consensus       134 ~~~akaal~gl~rsla~E~~~gi~v~~i~~~~----~~-------~~~~~~~~~--~l~s~~~a~~~g~~i~~~~~~~  198 (450)
T PRK08261        134 AAAAQRALEGFTRSLGKELRRGATAQLVYVAP----GA-------EAGLESTLR--FFLSPRSAYVSGQVVRVGAADA  198 (450)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCEEEEEecCC----CC-------HHHHHHHHH--HhcCCccCCccCcEEEecCCcc
Confidence            899997555555544443  369999998874    11       111222221  5666677888999888888753

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=98.32  E-value=2.9e-06  Score=75.13  Aligned_cols=79  Identities=22%  Similarity=0.120  Sum_probs=58.8

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEE
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVF   82 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi   82 (248)
                      .+++|+++|+|+++ +|.++++.|+++|++|++++++..+......+++..  ..+.++.+|..+     ....++|+||
T Consensus         2 ~~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~--~~~~~~~~~~~~-----~~~~~~d~vv   73 (450)
T PRK14106          2 ELKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGE--LGIELVLGEYPE-----EFLEGVDLVV   73 (450)
T ss_pred             CcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHh--cCCEEEeCCcch-----hHhhcCCEEE
Confidence            47889999999888 999999999999999999998753222222233322  246678888876     2345789999


Q ss_pred             EccccCC
Q 025755           83 HVACPVP   89 (248)
Q Consensus        83 ~~ag~~~   89 (248)
                      +++|...
T Consensus        74 ~~~g~~~   80 (450)
T PRK14106         74 VSPGVPL   80 (450)
T ss_pred             ECCCCCC
Confidence            9998743

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=98.31  E-value=0.00017  Score=53.80  Aligned_cols=162  Identities=18%  Similarity=0.146  Sum_probs=99.9

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeE-EEEccCCCHH---H----HHHHh--
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQ-LFKTDLLDYE---A----LCAAT--   75 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~Di~d~~---~----~~~~~--   75 (248)
                      -.+|+|-||-|-+|+++++.|-.++|-|.-++.+..+.            .+.. ++..|-.=.+   +    +-+.+  
T Consensus         3 agrVivYGGkGALGSacv~~FkannywV~siDl~eNe~------------Ad~sI~V~~~~swtEQe~~v~~~vg~sL~g   70 (236)
T KOG4022|consen    3 AGRVIVYGGKGALGSACVEFFKANNYWVLSIDLSENEQ------------ADSSILVDGNKSWTEQEQSVLEQVGSSLQG   70 (236)
T ss_pred             CceEEEEcCcchHhHHHHHHHHhcCeEEEEEeeccccc------------ccceEEecCCcchhHHHHHHHHHHHHhhcc
Confidence            36899999999999999999999999999888765321            1111 1222221111   1    12222  


Q ss_pred             CCCCEEEEccccCCCCCCC-----CccccchhhhHHHHHHHHHHHHhc-CCCEEEEEec-cceeccCCCCCCCCccCCCC
Q 025755           76 AGCTGVFHVACPVPVGKVP-----NPEVQLIDPAVVGTKNVLNSCVKA-KVKRVVVVSS-IGAVMLNPNWPKGQVMDEEC  148 (248)
Q Consensus        76 ~~id~vi~~ag~~~~~~~~-----~~~~~~~~~n~~g~~~~~~~~~~~-~~~~iV~vSS-~~~~~~~~~~~~~~~~~e~~  148 (248)
                      +++|.|+..||....++..     .+-+.+++-.+.....-.+.+... +.+-+..+.. -.+..+.|..          
T Consensus        71 ekvDav~CVAGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~GGLL~LtGAkaAl~gTPgM----------  140 (236)
T KOG4022|consen   71 EKVDAVFCVAGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKPGGLLQLTGAKAALGGTPGM----------  140 (236)
T ss_pred             cccceEEEeeccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCCCceeeecccccccCCCCcc----------
Confidence            2589999999865544322     111334444444333333333333 4445555544 3344444432          


Q ss_pred             CCchhhhccccchHHHHHHHHHHHHHHHHHhC-Cc----cEEEEccCeeecCCCCCC
Q 025755          149 WSDEEFCKATENYYCLAKTIAEIQALEYAKRG-EL----DIVTVCPSIVIGPMLQPT  200 (248)
Q Consensus       149 ~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~-~i----~v~~vrpg~i~g~~~~~~  200 (248)
                                 ..||.+|++..++...++.+. |+    -+..|-|-...+|+.+.+
T Consensus       141 -----------IGYGMAKaAVHqLt~SLaak~SGlP~gsaa~~ilPVTLDTPMNRKw  186 (236)
T KOG4022|consen  141 -----------IGYGMAKAAVHQLTSSLAAKDSGLPDGSAALTILPVTLDTPMNRKW  186 (236)
T ss_pred             -----------cchhHHHHHHHHHHHHhcccccCCCCCceeEEEeeeeccCcccccc
Confidence                       339999999999999998543 44    477888999999998765

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=98.21  E-value=1.4e-05  Score=65.14  Aligned_cols=74  Identities=16%  Similarity=0.078  Sum_probs=55.6

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC--CCCEEEEc
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA--GCTGVFHV   84 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~--~id~vi~~   84 (248)
                      |+|+|+||||. |+.+++.|.++|++|++..++....  ....     .....-+..+..|.+++..+++  ++|+||+.
T Consensus         1 m~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~--~~~~-----~~g~~~v~~g~l~~~~l~~~l~~~~i~~VIDA   72 (256)
T TIGR00715         1 MTVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGK--HLYP-----IHQALTVHTGALDPQELREFLKRHSIDILVDA   72 (256)
T ss_pred             CeEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCcc--cccc-----ccCCceEEECCCCHHHHHHHHHhcCCCEEEEc
Confidence            48999999998 9999999999999999999887421  1111     1112234566778888888886  48999999


Q ss_pred             cccC
Q 025755           85 ACPV   88 (248)
Q Consensus        85 ag~~   88 (248)
                      +-+.
T Consensus        73 tHPf   76 (256)
T TIGR00715        73 THPF   76 (256)
T ss_pred             CCHH
Confidence            8654

This enzyme was found to be a monomer by gel filtration.

>KOG3019 consensus Predicted nucleoside-diphosphate sugar epimerase [Nucleotide transport and metabolism]

Probab=98.20  E-value=8e-07  Score=69.45  Aligned_cols=212  Identities=13%  Similarity=0.062  Sum_probs=119.1

Q ss_pred             CCcEEEEEcCccHHHHHHHHHH-----HHCC----CeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHh
Q 025755            5 DKERVCVTGAGGYIASWLVKYL-----LLKG----YMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAAT   75 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l-----~~~g----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~   75 (248)
                      ++++.++-+++|+|+..+....     -+.+    |.|+++.|++..             .++.+.+.|..-.--  +..
T Consensus        11 ~sr~a~~~~~~g~i~~nl~~~~~~~H~t~~~~a~~h~vtv~sR~pg~-------------~ritw~el~~~Gip~--sc~   75 (315)
T KOG3019|consen   11 KSRDAVSNWSNGIIRENLGSETSCCHDTNVHSADNHAVTVLSRSPGK-------------ARITWPELDFPGIPI--SCV   75 (315)
T ss_pred             ccccCCCCccccchhccccCcccccccCCCCcccccceEEEecCCCC-------------cccccchhcCCCCce--ehH
Confidence            4577888999999998887632     2223    889999998752             234444333321110  111


Q ss_pred             CCCCEEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhc--CCCEEEEEeccceeccCCCCCCCCccCCCCCCchh
Q 025755           76 AGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKA--KVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEE  153 (248)
Q Consensus        76 ~~id~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~--~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~  153 (248)
                      +.++.+.+|+...-..+.+.-..++...-+..+..++++..+.  ..+..|.+|..+.+.++.    .+.++|+.+..--
T Consensus        76 a~vna~g~n~l~P~rRWsp~fqkev~gSRi~~t~~la~aI~~aPq~~~~~Vlv~gva~y~pS~----s~eY~e~~~~qgf  151 (315)
T KOG3019|consen   76 AGVNAVGNNALLPIRRWSPEFQKEVKGSRIRVTSKLADAINNAPQEARPTVLVSGVAVYVPSE----SQEYSEKIVHQGF  151 (315)
T ss_pred             HHHhhhhhhccCchhhcCHHHHHHhhcceeeHHHHHHHHHhcCCCCCCCeEEEEeeEEecccc----ccccccccccCCh
Confidence            1123334444332222222222344445555578888888766  456899998865443432    5667777664321


Q ss_pred             hhccccchHHHHHHHHHHHHHHHHHhCCccEEEEccCeeecCCCCCCCCccHHHHHHHHcCCCCCCCCCchhhhhhhhhc
Q 025755          154 FCKATENYYCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKGFFFTTPSHSYMLERTLVLN  233 (248)
Q Consensus       154 ~~~~~~~~Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~l~vd  233 (248)
                       -      | .|+.+.|.-....-....+|++++|-|.|.|......  ....+.-++-.|.++   +++...-..||+|
T Consensus       152 -d------~-~srL~l~WE~aA~~~~~~~r~~~iR~GvVlG~gGGa~--~~M~lpF~~g~GGPl---GsG~Q~fpWIHv~  218 (315)
T KOG3019|consen  152 -D------I-LSRLCLEWEGAALKANKDVRVALIRIGVVLGKGGGAL--AMMILPFQMGAGGPL---GSGQQWFPWIHVD  218 (315)
T ss_pred             -H------H-HHHHHHHHHHHhhccCcceeEEEEEEeEEEecCCcch--hhhhhhhhhccCCcC---CCCCeeeeeeehH
Confidence             0      2 3444444333222222249999999999999764322  111122233344444   3445555679999


Q ss_pred             cceeEEEeeccCCCC
Q 025755          234 QGVRLYRCKIQIPTL  248 (248)
Q Consensus       234 ~g~~~~~~~~~~p~~  248 (248)
                      |.++++.-++++|++
T Consensus       219 DL~~li~~ale~~~v  233 (315)
T KOG3019|consen  219 DLVNLIYEALENPSV  233 (315)
T ss_pred             HHHHHHHHHHhcCCC
Confidence            999999888888753

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=98.16  E-value=1.3e-05  Score=61.99  Aligned_cols=75  Identities=11%  Similarity=0.063  Sum_probs=47.7

Q ss_pred             CCCcEEEEEcC----------------ccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCC
Q 025755            4 EDKERVCVTGA----------------GGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLD   67 (248)
Q Consensus         4 l~~k~vlVtG~----------------~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d   67 (248)
                      |+||+||||+|                ||..|.++++.++.+|++|+.+.....- .         .+..+..+.  +.+
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~~~-~---------~p~~~~~i~--v~s   68 (185)
T PF04127_consen    1 LKGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPSSL-P---------PPPGVKVIR--VES   68 (185)
T ss_dssp             -TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TTS--------------TTEEEEE---SS
T ss_pred             CCCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCccc-c---------ccccceEEE--ecc
Confidence            57899999986                6899999999999999999998876420 0         023555554  344


Q ss_pred             HHH----HHHHhCCCCEEEEccccCCC
Q 025755           68 YEA----LCAATAGCTGVFHVACPVPV   90 (248)
Q Consensus        68 ~~~----~~~~~~~id~vi~~ag~~~~   90 (248)
                      .++    +...+++.|++||+|++...
T Consensus        69 a~em~~~~~~~~~~~Di~I~aAAVsDf   95 (185)
T PF04127_consen   69 AEEMLEAVKELLPSADIIIMAAAVSDF   95 (185)
T ss_dssp             HHHHHHHHHHHGGGGSEEEE-SB--SE
T ss_pred             hhhhhhhhccccCcceeEEEecchhhe
Confidence            333    44455678999999998753

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=98.13  E-value=1.6e-05  Score=58.54  Aligned_cols=78  Identities=22%  Similarity=0.136  Sum_probs=54.5

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCe-EEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEE
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYM-VHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGV   81 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~v   81 (248)
                      ++++++++|.|+ |+.|+.++..|.+.|++ |+++.|+.++ .....+.+  ....+.++..     +++....++.|+|
T Consensus         9 ~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~r-a~~l~~~~--~~~~~~~~~~-----~~~~~~~~~~Div   79 (135)
T PF01488_consen    9 DLKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPER-AEALAEEF--GGVNIEAIPL-----EDLEEALQEADIV   79 (135)
T ss_dssp             TGTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHH-HHHHHHHH--TGCSEEEEEG-----GGHCHHHHTESEE
T ss_pred             CcCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHH-HHHHHHHc--CccccceeeH-----HHHHHHHhhCCeE
Confidence            478999999998 88999999999999986 9999998643 22333333  1233444433     3344666789999


Q ss_pred             EEccccCC
Q 025755           82 FHVACPVP   89 (248)
Q Consensus        82 i~~ag~~~   89 (248)
                      |++.+...
T Consensus        80 I~aT~~~~   87 (135)
T PF01488_consen   80 INATPSGM   87 (135)
T ss_dssp             EE-SSTTS
T ss_pred             EEecCCCC
Confidence            99987543

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=97.99  E-value=0.00015  Score=53.81  Aligned_cols=113  Identities=19%  Similarity=0.148  Sum_probs=74.5

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCC--CeEEEEEcCCCchh--hHHhhhhcCCC-CCeEEEEccCCCHHHHHHHhCCCCEE
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKG--YMVHGTVRDPCDEK--NAHLKKLEGAS-ENLQLFKTDLLDYEALCAATAGCTGV   81 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g--~~V~~~~r~~~~~~--~~~~~~~~~~~-~~~~~~~~Di~d~~~~~~~~~~id~v   81 (248)
                      +||.|+|++|.+|++++..|+..+  .++++++++.....  ...+....... .......   .+.+    .++++|+|
T Consensus         1 ~KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~---~~~~----~~~~aDiv   73 (141)
T PF00056_consen    1 MKVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITS---GDYE----ALKDADIV   73 (141)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEE---SSGG----GGTTESEE
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhccccccccc---cccc----ccccccEE
Confidence            489999999999999999999987  47999998853221  11122221111 1222222   2223    35688999


Q ss_pred             EEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCC-CEEEEEec
Q 025755           82 FHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKV-KRVVVVSS  128 (248)
Q Consensus        82 i~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~-~~iV~vSS  128 (248)
                      |-.||.....  ...-.+.++.|..-.+.+.+.+.+... +.++.+|.
T Consensus        74 vitag~~~~~--g~sR~~ll~~N~~i~~~~~~~i~~~~p~~~vivvtN  119 (141)
T PF00056_consen   74 VITAGVPRKP--GMSRLDLLEANAKIVKEIAKKIAKYAPDAIVIVVTN  119 (141)
T ss_dssp             EETTSTSSST--TSSHHHHHHHHHHHHHHHHHHHHHHSTTSEEEE-SS
T ss_pred             EEeccccccc--cccHHHHHHHhHhHHHHHHHHHHHhCCccEEEEeCC
Confidence            9999975432  223367889999999999999988854 35555543

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=97.96  E-value=6.2e-05  Score=63.12  Aligned_cols=164  Identities=17%  Similarity=0.022  Sum_probs=101.0

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCC--CeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEEc
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKG--YMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFHV   84 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~~   84 (248)
                      +||.|+|++|.+|++++-.|+..+  .++++++.+..++....+....   ....+....  ..+++.+.+++.|+||-+
T Consensus         1 ~KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~~a~g~alDL~~~~---~~~~i~~~~--~~~~~y~~~~daDivvit   75 (310)
T cd01337           1 VKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIVNTPGVAADLSHIN---TPAKVTGYL--GPEELKKALKGADVVVIP   75 (310)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecCccceeehHhHhCC---CcceEEEec--CCCchHHhcCCCCEEEEe
Confidence            489999999999999999999888  4788888873222222222111   111121110  112355668899999999


Q ss_pred             cccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCC-CEEEEEeccceec------c---CCCCCCCCccCCCCCCchhh
Q 025755           85 ACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKV-KRVVVVSSIGAVM------L---NPNWPKGQVMDEECWSDEEF  154 (248)
Q Consensus        85 ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~-~~iV~vSS~~~~~------~---~~~~~~~~~~~e~~~~~~~~  154 (248)
                      ||.....  ...=.+.++.|..-...+.+...+.+. ..+|.+|-.....      .   ..+++.              
T Consensus        76 aG~~~k~--g~tR~dll~~N~~i~~~i~~~i~~~~p~a~vivvtNPvDv~~~i~t~~~~~~s~~p~--------------  139 (310)
T cd01337          76 AGVPRKP--GMTRDDLFNINAGIVRDLATAVAKACPKALILIISNPVNSTVPIAAEVLKKAGVYDP--------------  139 (310)
T ss_pred             CCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccCchhhHHHHHHHHHHHhcCCCH--------------
Confidence            9975432  122367889999999999999988854 4566666544211      0   000000              


Q ss_pred             hccccchHHHHHHHHHHHHHHHHHhCCccEEEEccCeeecCC
Q 025755          155 CKATENYYCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPM  196 (248)
Q Consensus       155 ~~~~~~~Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~  196 (248)
                          ....|.+-.=+-++...++++.+++...|+ ++++|.+
T Consensus       140 ----~rviG~~~LDs~R~~~~la~~l~v~~~~V~-~~v~GeH  176 (310)
T cd01337         140 ----KRLFGVTTLDVVRANTFVAELLGLDPAKVN-VPVIGGH  176 (310)
T ss_pred             ----HHEEeeechHHHHHHHHHHHHhCcCHHHEE-EEEEecC
Confidence                001222223345666677777778777777 7899988

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>COG4982 3-oxoacyl-[acyl-carrier protein]

Probab=97.94  E-value=0.00052  Score=61.31  Aligned_cols=173  Identities=17%  Similarity=0.149  Sum_probs=106.5

Q ss_pred             CCCcEEEEEcCc-cHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhh----hcCCCCCeEEEEccCCCHHHHHHHhC--
Q 025755            4 EDKERVCVTGAG-GYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKK----LEGASENLQLFKTDLLDYEALCAATA--   76 (248)
Q Consensus         4 l~~k~vlVtG~~-g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~~~~~Di~d~~~~~~~~~--   76 (248)
                      ...+.++|||++ |.||..++..|+..|.+|+++..+..+......+.    .......+-++..+..+..++..+++  
T Consensus       394 y~d~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDVdAlIewI  473 (866)
T COG4982         394 YGDKVALVTGASKGSIAAAVVARLLAGGATVIATTSRLSEERTEFYRSLYARHARYGAALWVVPANMGSYSDVDALIEWI  473 (866)
T ss_pred             cccceEEEecCCCcchHHHHHHHHHhCCcEEEEEcccccHHHHHHHHHHHHhhCCCCceEEEEeccccchhhHHHHHHHh
Confidence            357899999965 78999999999999999999876554332222222    22233345566688877777777653  


Q ss_pred             -------------------CCCEEEEccccCCCCCCCCc---cccchhhhHHHHHHHHHHHHhcCC-------CEEEEEe
Q 025755           77 -------------------GCTGVFHVACPVPVGKVPNP---EVQLIDPAVVGTKNVLNSCVKAKV-------KRVVVVS  127 (248)
Q Consensus        77 -------------------~id~vi~~ag~~~~~~~~~~---~~~~~~~n~~g~~~~~~~~~~~~~-------~~iV~vS  127 (248)
                                         ..|.+|-+|++...+...+.   .+--+++-+.....++-..++.+.       -++|.-.
T Consensus       474 g~eq~~t~g~~s~~~k~a~~ptll~PFAAp~v~G~l~~agsraE~~~rilLw~V~Rliggl~~~~s~r~v~~R~hVVLPg  553 (866)
T COG4982         474 GDEQTETVGPQSIHIKLAWTPTLLFPFAAPRVSGELADAGSRAEFAMRILLWNVLRLIGGLKKQGSSRGVDTRLHVVLPG  553 (866)
T ss_pred             ccccccccCCcceecccccCcceeeecccCCccCccccCCchHHHHHHHHHHHHHHHHHHhhhhccccCcccceEEEecC
Confidence                               14788888887554432211   122234444555566666665532       1344445


Q ss_pred             ccceeccCCCCCCCCccCCCCCCchhhhccccchHHHHHHHHHHHHHHHHHhC----CccEEEEccCeeecCCCC
Q 025755          128 SIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKRG----ELDIVTVCPSIVIGPMLQ  198 (248)
Q Consensus       128 S~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~----~i~v~~vrpg~i~g~~~~  198 (248)
                      |... ..+.+                     +..|+-||..-+.+...+..+.    .+.+.-.+.||+-|.+--
T Consensus       554 SPNr-G~FGg---------------------DGaYgEsK~aldav~~RW~sEs~Wa~~vsl~~A~IGWtrGTGLM  606 (866)
T COG4982         554 SPNR-GMFGG---------------------DGAYGESKLALDAVVNRWHSESSWAARVSLAHALIGWTRGTGLM  606 (866)
T ss_pred             CCCC-CccCC---------------------CcchhhHHHHHHHHHHHhhccchhhHHHHHhhhheeeecccccc
Confidence            5331 11111                     2349999998888888876543    355666778888876543

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=97.93  E-value=0.00047  Score=58.15  Aligned_cols=118  Identities=14%  Similarity=0.140  Sum_probs=78.5

Q ss_pred             CCCCCCcEEEEEcCccHHHHHHHHHHHHCCC--eEEEEEcCCCchhhH--HhhhhcCCCCCeEEEEccCCCHHHHHHHhC
Q 025755            1 MSGEDKERVCVTGAGGYIASWLVKYLLLKGY--MVHGTVRDPCDEKNA--HLKKLEGASENLQLFKTDLLDYEALCAATA   76 (248)
Q Consensus         1 m~~l~~k~vlVtG~~g~iG~~~~~~l~~~g~--~V~~~~r~~~~~~~~--~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~   76 (248)
                      |+.-.++||.|+|+ |.+|..++..|+..|.  ++.+++++.+...-.  .+........++....   .+.    ..++
T Consensus         1 ~~~~~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~~---~~~----~~~~   72 (315)
T PRK00066          1 MMKKQHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIYA---GDY----SDCK   72 (315)
T ss_pred             CCCCCCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEEe---CCH----HHhC
Confidence            44456789999998 9999999999999886  799999876432221  1222111112233322   222    2367


Q ss_pred             CCCEEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCC-CEEEEEec
Q 025755           77 GCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKV-KRVVVVSS  128 (248)
Q Consensus        77 ~id~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~-~~iV~vSS  128 (248)
                      ++|+||-.||......  ..-.+.++.|..-.+.+++.+.+.+. ..+|.+|-
T Consensus        73 ~adivIitag~~~k~g--~~R~dll~~N~~i~~~i~~~i~~~~~~~~vivvsN  123 (315)
T PRK00066         73 DADLVVITAGAPQKPG--ETRLDLVEKNLKIFKSIVGEVMASGFDGIFLVASN  123 (315)
T ss_pred             CCCEEEEecCCCCCCC--CCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccC
Confidence            8999999999754322  22257889999999999999988754 35555553

>PRK05442 malate dehydrogenase; Provisional

Probab=97.92  E-value=0.00012  Score=61.97  Aligned_cols=167  Identities=14%  Similarity=0.073  Sum_probs=99.0

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCC-------eEEEEEcCCCc----hhhHHhhhhc-CCCCCeEEEEccCCCHHHHH
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGY-------MVHGTVRDPCD----EKNAHLKKLE-GASENLQLFKTDLLDYEALC   72 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~-------~V~~~~r~~~~----~~~~~~~~~~-~~~~~~~~~~~Di~d~~~~~   72 (248)
                      +.++|.|+|++|.+|+.++..|+..+.       ++++++.+...    +....+.... ....++.+     +  ....
T Consensus         3 ~~~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~i-----~--~~~y   75 (326)
T PRK05442          3 APVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVVI-----T--DDPN   75 (326)
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcEE-----e--cChH
Confidence            357999999999999999999987663       68888875421    1111111111 10112211     1  1223


Q ss_pred             HHhCCCCEEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcC--CCEEEEEeccceeccC------CCCCCCCcc
Q 025755           73 AATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAK--VKRVVVVSSIGAVMLN------PNWPKGQVM  144 (248)
Q Consensus        73 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~--~~~iV~vSS~~~~~~~------~~~~~~~~~  144 (248)
                      +.+++.|+||-+||.....  ...-.+.++.|..-.+.+.+.+.++.  -..+|.+|-...+...      ++++.    
T Consensus        76 ~~~~daDiVVitaG~~~k~--g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvsNPvDv~t~v~~k~s~g~p~----  149 (326)
T PRK05442         76 VAFKDADVALLVGARPRGP--GMERKDLLEANGAIFTAQGKALNEVAARDVKVLVVGNPANTNALIAMKNAPDLPA----  149 (326)
T ss_pred             HHhCCCCEEEEeCCCCCCC--CCcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCCchHHHHHHHHHHcCCCCH----
Confidence            5567899999999975432  22336788999999999999999853  3556666643211110      01110    


Q ss_pred             CCCCCCchhhhccccchHHHHHHHHHHHHHHHHHhCCccEEEEccCeeecCCCC
Q 025755          145 DEECWSDEEFCKATENYYCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQ  198 (248)
Q Consensus       145 ~e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~  198 (248)
                                    ....|.+-.-+-++...++++.+++...|+.-.|.|.+..
T Consensus       150 --------------~rViG~t~LDs~R~r~~la~~l~v~~~~V~~~vV~GeHG~  189 (326)
T PRK05442        150 --------------ENFTAMTRLDHNRALSQLAAKAGVPVADIKKMTVWGNHSA  189 (326)
T ss_pred             --------------HHEEeeeHHHHHHHHHHHHHHhCcChHHeEEeEEEECCcC
Confidence                          0113333345566666777777777777665566776543

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=97.84  E-value=0.00032  Score=58.95  Aligned_cols=162  Identities=15%  Similarity=0.103  Sum_probs=97.5

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCC--CeEEEEEcCCCchhhHHhhhhcC----CCCCeEEEEccCCCHHHHHHHhCCCCE
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKG--YMVHGTVRDPCDEKNAHLKKLEG----ASENLQLFKTDLLDYEALCAATAGCTG   80 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~~Di~d~~~~~~~~~~id~   80 (248)
                      ++|.|.|+ |++|+.++..|+..|  .++++++++.+... .....+..    .........   .+.+    .++++|+
T Consensus         1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~-~~a~dL~~~~~~~~~~~~i~~---~~~~----~l~~aDI   71 (306)
T cd05291           1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAE-GEALDLEDALAFLPSPVKIKA---GDYS----DCKDADI   71 (306)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhh-HhHhhHHHHhhccCCCeEEEc---CCHH----HhCCCCE
Confidence            47899996 899999999999999  58999999775322 21222211    112222222   2222    2578999


Q ss_pred             EEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCC-CEEEEEeccceeccC-----CCCCCCCccCCCCCCchhh
Q 025755           81 VFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKV-KRVVVVSSIGAVMLN-----PNWPKGQVMDEECWSDEEF  154 (248)
Q Consensus        81 vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~-~~iV~vSS~~~~~~~-----~~~~~~~~~~e~~~~~~~~  154 (248)
                      ||+++|.....  ...-.+.++.|..-.+.+.+.+.+... ..+|.+|-.......     .++++              
T Consensus        72 VIitag~~~~~--g~~R~dll~~N~~i~~~~~~~i~~~~~~~~vivvsNP~d~~~~~~~~~~g~p~--------------  135 (306)
T cd05291          72 VVITAGAPQKP--GETRLDLLEKNAKIMKSIVPKIKASGFDGIFLVASNPVDVITYVVQKLSGLPK--------------  135 (306)
T ss_pred             EEEccCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecChHHHHHHHHHHHhCcCH--------------
Confidence            99999975432  122257889999999999999988754 455666543221110     00000              


Q ss_pred             hccccchHHHHH-HHHHHHHHHHHHhCCccEEEEccCeeecCCCC
Q 025755          155 CKATENYYCLAK-TIAEIQALEYAKRGELDIVTVCPSIVIGPMLQ  198 (248)
Q Consensus       155 ~~~~~~~Y~~sK-~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~  198 (248)
                          ....|..- .-.-++...++++.+++...|+. +|.|.+..
T Consensus       136 ----~~v~g~gt~LDs~R~~~~la~~l~v~~~~v~~-~V~G~Hg~  175 (306)
T cd05291         136 ----NRVIGTGTSLDTARLRRALAEKLNVDPRSVHA-YVLGEHGD  175 (306)
T ss_pred             ----HHEeeccchHHHHHHHHHHHHHHCCCcccceE-EEEecCCC
Confidence                00122211 12555666666666787777775 78887643

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>PTZ00082 L-lactate dehydrogenase; Provisional

Probab=97.82  E-value=0.0011  Score=56.16  Aligned_cols=123  Identities=17%  Similarity=0.084  Sum_probs=78.2

Q ss_pred             CCCCCCcEEEEEcCccHHHHHHHHHHHHCCC-eEEEEEcCCCchhhHHhhhhc--C-CCCCeEEEEccCCCHHHHHHHhC
Q 025755            1 MSGEDKERVCVTGAGGYIASWLVKYLLLKGY-MVHGTVRDPCDEKNAHLKKLE--G-ASENLQLFKTDLLDYEALCAATA   76 (248)
Q Consensus         1 m~~l~~k~vlVtG~~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~--~-~~~~~~~~~~Di~d~~~~~~~~~   76 (248)
                      |...+.+||.|+| +|.+|+.++..++..|. +|++++.+.+......+....  . ......+...  .|.    +.++
T Consensus         1 ~~~~~~~KI~IIG-aG~vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~~~--~d~----~~l~   73 (321)
T PTZ00082          1 MTMIKRRKISLIG-SGNIGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVIGT--NNY----EDIA   73 (321)
T ss_pred             CCCCCCCEEEEEC-CCHHHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEEEC--CCH----HHhC
Confidence            4556778999999 58899999999999995 899999887533212221111  1 1112222211  222    2467


Q ss_pred             CCCEEEEccccCCCCCCCC---ccccchhhhHHHHHHHHHHHHhcCCC-EEEEEeccc
Q 025755           77 GCTGVFHVACPVPVGKVPN---PEVQLIDPAVVGTKNVLNSCVKAKVK-RVVVVSSIG  130 (248)
Q Consensus        77 ~id~vi~~ag~~~~~~~~~---~~~~~~~~n~~g~~~~~~~~~~~~~~-~iV~vSS~~  130 (248)
                      ++|+||.++|........+   +-.+.+..|+.-.+.+.+.+.+.... .+|++|-..
T Consensus        74 ~aDiVI~tag~~~~~~~~~~~~~r~~~l~~n~~i~~~i~~~i~~~~p~a~~iv~sNP~  131 (321)
T PTZ00082         74 GSDVVIVTAGLTKRPGKSDKEWNRDDLLPLNAKIMDEVAEGIKKYCPNAFVIVITNPL  131 (321)
T ss_pred             CCCEEEECCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcH
Confidence            9999999998754322111   22456777888888888888887544 577766543

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=97.80  E-value=6.5e-05  Score=71.20  Aligned_cols=165  Identities=17%  Similarity=0.163  Sum_probs=113.1

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCCe-EEEEEcCCCchh-hHHhhhhcC-CCCCeEEEEccCCCHHHHHHHhCC-----
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGYM-VHGTVRDPCDEK-NAHLKKLEG-ASENLQLFKTDLLDYEALCAATAG-----   77 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~~-V~~~~r~~~~~~-~~~~~~~~~-~~~~~~~~~~Di~d~~~~~~~~~~-----   77 (248)
                      .|..+|+||-||.|.++++-|..+|.+ ++++.|+.-.-. +...-..+. .+-.+.+-..|++..+..+++++.     
T Consensus      1768 eksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~~GVqV~vsT~nitt~~ga~~Li~~s~kl~ 1847 (2376)
T KOG1202|consen 1768 EKSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRRRGVQVQVSTSNITTAEGARGLIEESNKLG 1847 (2376)
T ss_pred             cceEEEeccccchhHHHHHHHHhcCceEEEEeccccchhhHHHHHHHHHHhcCeEEEEecccchhhhhHHHHHHHhhhcc
Confidence            478999999999999999999999985 556667653221 122222222 234456666888888877777763     


Q ss_pred             -CCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHHhc--CCCEEEEEeccceeccCCCCCCCCccCCCCCC
Q 025755           78 -CTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCVKA--KVKRVVVVSSIGAVMLNPNWPKGQVMDEECWS  150 (248)
Q Consensus        78 -id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~~~--~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~  150 (248)
                       +-.|+|.|.+....-.    ...+.+.-+.-+.|+.|+=+.-++.  ...-||.+||...-.++.++.-          
T Consensus      1848 ~vGGiFnLA~VLRD~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~~LdyFv~FSSvscGRGN~GQtN---------- 1917 (2376)
T KOG1202|consen 1848 PVGGIFNLAAVLRDGLIENQTPKNFKDVAKPKYSGTINLDRVSREICPELDYFVVFSSVSCGRGNAGQTN---------- 1917 (2376)
T ss_pred             cccchhhHHHHHHhhhhcccChhHHHhhhccceeeeeehhhhhhhhCcccceEEEEEeecccCCCCcccc----------
Confidence             5678999988765422    2334455566677787776666655  5678999999776666655333          


Q ss_pred             chhhhccccchHHHHHHHHHHHHHHHHHhCCccEEEEccCee
Q 025755          151 DEEFCKATENYYCLAKTIAEIQALEYAKRGELDIVTVCPSIV  192 (248)
Q Consensus       151 ~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i  192 (248)
                                 ||.+..+.|+++..-..+ |.+-++|-=|.|
T Consensus      1918 -----------YG~aNS~MERiceqRr~~-GfPG~AiQWGAI 1947 (2376)
T KOG1202|consen 1918 -----------YGLANSAMERICEQRRHE-GFPGTAIQWGAI 1947 (2376)
T ss_pred             -----------cchhhHHHHHHHHHhhhc-CCCcceeeeecc
Confidence                       999999999999775543 466666655543

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=97.80  E-value=0.00019  Score=60.56  Aligned_cols=170  Identities=15%  Similarity=0.045  Sum_probs=99.4

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCCC-------eEEEEEcCCCc--hh--hHHhhhhc-CCCCCeEEEEccCCCHHHHHHH
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKGY-------MVHGTVRDPCD--EK--NAHLKKLE-GASENLQLFKTDLLDYEALCAA   74 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g~-------~V~~~~r~~~~--~~--~~~~~~~~-~~~~~~~~~~~Di~d~~~~~~~   74 (248)
                      -||.|+|++|.+|+.++-.|+..|.       ++++++.....  ..  ...+.... ....+..     ++  ......
T Consensus         4 ~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~-----i~--~~~~~~   76 (323)
T TIGR01759         4 VRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLAGVV-----AT--TDPEEA   76 (323)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhccccccCCcE-----Ee--cChHHH
Confidence            5899999999999999999998873       78888885421  11  11111111 0011111     11  123355


Q ss_pred             hCCCCEEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCC--CEEEEEeccceeccCCCCCCCCccCCCC-CCc
Q 025755           75 TAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKV--KRVVVVSSIGAVMLNPNWPKGQVMDEEC-WSD  151 (248)
Q Consensus        75 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~--~~iV~vSS~~~~~~~~~~~~~~~~~e~~-~~~  151 (248)
                      ++++|+||..||.....  ...-.+.++.|..-.+.+.+.+.+...  ..++.+|-..-+....       +-+.. -..
T Consensus        77 ~~daDvVVitAG~~~k~--g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvsNPvDv~t~v-------~~k~s~g~p  147 (323)
T TIGR01759        77 FKDVDAALLVGAFPRKP--GMERADLLSKNGKIFKEQGKALNKVAKKDVKVLVVGNPANTNALI-------ASKNAPDIP  147 (323)
T ss_pred             hCCCCEEEEeCCCCCCC--CCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeCCcHHHHHHH-------HHHHcCCCC
Confidence            67899999999975432  223367889999999999999998854  4455554322111000       00000 000


Q ss_pred             hhhhccccchHHHHHHHHHHHHHHHHHhCCccEEEEccCeeecCCCC
Q 025755          152 EEFCKATENYYCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQ  198 (248)
Q Consensus       152 ~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~  198 (248)
                      +      ....|.+..-+-++...++++.+++...|+-..|.|.+..
T Consensus       148 ~------~rViG~t~LDs~R~r~~la~~l~v~~~~V~~~~V~GeHG~  188 (323)
T TIGR01759       148 P------KNFSAMTRLDHNRAKYQLAAKAGVPVSDVKNVIIWGNHSN  188 (323)
T ss_pred             H------HHEEEeeHHHHHHHHHHHHHHhCcChHHeEEeEEEecCCC
Confidence            0      0113334445666667777777777777766677787553

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=97.75  E-value=0.00081  Score=57.26  Aligned_cols=105  Identities=15%  Similarity=0.081  Sum_probs=67.8

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCC-eEEEEEcCCCch-------------------hh-HHhhhhcCCCC--CeEE
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGY-MVHGTVRDPCDE-------------------KN-AHLKKLEGASE--NLQL   60 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~-------------------~~-~~~~~~~~~~~--~~~~   60 (248)
                      +++++|+|.|+ |++|+++++.|++.|. ++++++++.-+.                   +. ...+.+...++  ++..
T Consensus        22 L~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i~~  100 (338)
T PRK12475         22 IREKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEIVP  100 (338)
T ss_pred             hcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEEEE
Confidence            56789999997 6699999999999997 888888875110                   11 11122222233  3555


Q ss_pred             EEccCCCHHHHHHHhCCCCEEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEec
Q 025755           61 FKTDLLDYEALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSS  128 (248)
Q Consensus        61 ~~~Di~d~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS  128 (248)
                      +..|++ .+.+..++++.|+||.+..                 |...-..+.++|.+.+. .+|+.+.
T Consensus       101 ~~~~~~-~~~~~~~~~~~DlVid~~D-----------------~~~~r~~in~~~~~~~i-p~i~~~~  149 (338)
T PRK12475        101 VVTDVT-VEELEELVKEVDLIIDATD-----------------NFDTRLLINDLSQKYNI-PWIYGGC  149 (338)
T ss_pred             EeccCC-HHHHHHHhcCCCEEEEcCC-----------------CHHHHHHHHHHHHHcCC-CEEEEEe
Confidence            666775 4567888899999997762                 11122335567777764 5666654

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=97.70  E-value=0.00026  Score=59.60  Aligned_cols=116  Identities=17%  Similarity=0.114  Sum_probs=73.2

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCCC--eEEEEEcCC--CchhhHH--hhh-hcCCCCCeEEEEccCCCHHHHHHHhCCCC
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKGY--MVHGTVRDP--CDEKNAH--LKK-LEGASENLQLFKTDLLDYEALCAATAGCT   79 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g~--~V~~~~r~~--~~~~~~~--~~~-~~~~~~~~~~~~~Di~d~~~~~~~~~~id   79 (248)
                      ++|.|+|++|.+|..++..|+..|.  +|++++++.  +......  +.. +........+...  .|   . ..++++|
T Consensus         1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~~i~~~--~d---~-~~l~~aD   74 (309)
T cd05294           1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDAEIKIS--SD---L-SDVAGSD   74 (309)
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCCcEEEEC--CC---H-HHhCCCC
Confidence            5899999999999999999999986  499999853  1111111  110 0011111111111  12   2 2378899


Q ss_pred             EEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCC-CEEEEEeccc
Q 025755           80 GVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKV-KRVVVVSSIG  130 (248)
Q Consensus        80 ~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~-~~iV~vSS~~  130 (248)
                      +||-++|.....  ..+-.+.++.|..-.+.+++.+.+... ..+|.+++..
T Consensus        75 iViitag~p~~~--~~~r~dl~~~n~~i~~~~~~~i~~~~~~~~viv~~npv  124 (309)
T cd05294          75 IVIITAGVPRKE--GMSRLDLAKKNAKIVKKYAKQIAEFAPDTKILVVTNPV  124 (309)
T ss_pred             EEEEecCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCch
Confidence            999999874432  112256778899999999988877733 4677777643

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=97.66  E-value=0.00023  Score=53.42  Aligned_cols=76  Identities=16%  Similarity=0.007  Sum_probs=50.6

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCC-CeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEE
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKG-YMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVF   82 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi   82 (248)
                      +++++++|+|+ |++|+.+++.|.+.| ++|++++|+.+.. ....+.+...     .+..+..+.   .++++++|+||
T Consensus        17 ~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~-~~~~~~~~~~-----~~~~~~~~~---~~~~~~~Dvvi   86 (155)
T cd01065          17 LKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKA-KALAERFGEL-----GIAIAYLDL---EELLAEADLII   86 (155)
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHH-HHHHHHHhhc-----ccceeecch---hhccccCCEEE
Confidence            46789999998 899999999999986 7899999876422 2222222110     012233333   33367899999


Q ss_pred             EccccCC
Q 025755           83 HVACPVP   89 (248)
Q Consensus        83 ~~ag~~~   89 (248)
                      ++.....
T Consensus        87 ~~~~~~~   93 (155)
T cd01065          87 NTTPVGM   93 (155)
T ss_pred             eCcCCCC
Confidence            9986544

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=97.65  E-value=0.00034  Score=56.13  Aligned_cols=74  Identities=18%  Similarity=0.149  Sum_probs=56.3

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHH-hCCCCEEEEcc
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAA-TAGCTGVFHVA   85 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~-~~~id~vi~~a   85 (248)
                      |+++|.|+ |.+|+.+|+.|.+.|++|++++++.....     +.....-....+.+|-+|++.|+++ +.++|++|-..
T Consensus         1 m~iiIiG~-G~vG~~va~~L~~~g~~Vv~Id~d~~~~~-----~~~~~~~~~~~v~gd~t~~~~L~~agi~~aD~vva~t   74 (225)
T COG0569           1 MKIIIIGA-GRVGRSVARELSEEGHNVVLIDRDEERVE-----EFLADELDTHVVIGDATDEDVLEEAGIDDADAVVAAT   74 (225)
T ss_pred             CEEEEECC-cHHHHHHHHHHHhCCCceEEEEcCHHHHH-----HHhhhhcceEEEEecCCCHHHHHhcCCCcCCEEEEee
Confidence            45666665 56999999999999999999999874222     1111124678899999999999998 67889888555


Q ss_pred             c
Q 025755           86 C   86 (248)
Q Consensus        86 g   86 (248)
                      +
T Consensus        75 ~   75 (225)
T COG0569          75 G   75 (225)
T ss_pred             C
Confidence            4

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=97.65  E-value=0.0014  Score=55.83  Aligned_cols=106  Identities=18%  Similarity=0.155  Sum_probs=69.3

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCC-eEEEEEcCCCch-------------------hhHH-hhhhcCCCCC--eEE
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGY-MVHGTVRDPCDE-------------------KNAH-LKKLEGASEN--LQL   60 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~-------------------~~~~-~~~~~~~~~~--~~~   60 (248)
                      |+.++|+|.|+ |++|+.+++.|++.|. ++++++++.-+.                   +... .+.+..-++.  +..
T Consensus        22 L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~v~~  100 (339)
T PRK07688         22 LREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVRVEA  100 (339)
T ss_pred             hcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcEEEE
Confidence            56789999998 7899999999999997 899998864111                   1111 1122222233  455


Q ss_pred             EEccCCCHHHHHHHhCCCCEEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEecc
Q 025755           61 FKTDLLDYEALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSI  129 (248)
Q Consensus        61 ~~~Di~d~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~  129 (248)
                      +..+++ .+.+..++++.|+||.+..                 |...-..+.++|.+.+. .+|+.++.
T Consensus       101 ~~~~~~-~~~~~~~~~~~DlVid~~D-----------------n~~~r~~ln~~~~~~~i-P~i~~~~~  150 (339)
T PRK07688        101 IVQDVT-AEELEELVTGVDLIIDATD-----------------NFETRFIVNDAAQKYGI-PWIYGACV  150 (339)
T ss_pred             EeccCC-HHHHHHHHcCCCEEEEcCC-----------------CHHHHHHHHHHHHHhCC-CEEEEeee
Confidence            556665 4556777889999997742                 22233456777887764 67776653

>PLN00112 malate dehydrogenase (NADP); Provisional

Probab=97.62  E-value=0.002  Score=56.57  Aligned_cols=168  Identities=12%  Similarity=0.000  Sum_probs=101.4

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHC-------CC--eEEEEEcCCCchhhHHhhhhcC---CCCCeEEEEccCCCHHHHHH
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLK-------GY--MVHGTVRDPCDEKNAHLKKLEG---ASENLQLFKTDLLDYEALCA   73 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~-------g~--~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~~Di~d~~~~~~   73 (248)
                      .-+|.|+|++|.+|.+++-.|+..       +.  ++++++++.+...-..++-...   ...++.+. .  .|    ..
T Consensus       100 ~~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~i~-~--~~----ye  172 (444)
T PLN00112        100 LINVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVSIG-I--DP----YE  172 (444)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceEEe-c--CC----HH
Confidence            358999999999999999999987       54  7888888775433222221111   01122111 1  12    24


Q ss_pred             HhCCCCEEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHh-cCC-CEEEEEeccceeccC-----CCCCCCCccCC
Q 025755           74 ATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVK-AKV-KRVVVVSSIGAVMLN-----PNWPKGQVMDE  146 (248)
Q Consensus        74 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~-~~~-~~iV~vSS~~~~~~~-----~~~~~~~~~~e  146 (248)
                      .++++|+||-.||.....  ..+=.+.++.|..-.+.+.+.+.+ .+. ..+|.+|-...+.-.     .+..+...+  
T Consensus       173 ~~kdaDiVVitAG~prkp--G~tR~dLl~~N~~I~k~i~~~I~~~a~p~~ivIVVsNPvDv~t~v~~k~sg~~~~rVi--  248 (444)
T PLN00112        173 VFQDAEWALLIGAKPRGP--GMERADLLDINGQIFAEQGKALNEVASRNVKVIVVGNPCNTNALICLKNAPNIPAKNF--  248 (444)
T ss_pred             HhCcCCEEEECCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEcCCcHHHHHHHHHHHcCCCCcceE--
Confidence            467899999999975432  222367889999999999999998 443 456666543211110     000000000  


Q ss_pred             CCCCchhhhccccchHHHHHHHHHHHHHHHHHhCCccEEEEccCeeecCCCCC
Q 025755          147 ECWSDEEFCKATENYYCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQP  199 (248)
Q Consensus       147 ~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~  199 (248)
                                     -..+..-.-++...++++.+++...|+-++|.|.+...
T Consensus       249 ---------------GtgT~LDsaR~r~~LA~~l~V~~~~V~~~~V~GeHGds  286 (444)
T PLN00112        249 ---------------HALTRLDENRAKCQLALKAGVFYDKVSNVTIWGNHSTT  286 (444)
T ss_pred             ---------------EeeccHHHHHHHHHHHHHhCcCHHHcccceEEecCCCc
Confidence                           11122345556666777777888888888888876543

>PTZ00117 malate dehydrogenase; Provisional

Probab=97.61  E-value=0.00069  Score=57.29  Aligned_cols=118  Identities=16%  Similarity=0.045  Sum_probs=75.2

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCC-CeEEEEEcCCCchhhHHhh--hhcCC-CCCeEEEEccCCCHHHHHHHhCCCC
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKG-YMVHGTVRDPCDEKNAHLK--KLEGA-SENLQLFKTDLLDYEALCAATAGCT   79 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g-~~V~~~~r~~~~~~~~~~~--~~~~~-~~~~~~~~~Di~d~~~~~~~~~~id   79 (248)
                      .+.++|.|+|+ |.+|+.++..++..| .++++++++.+......+.  ..... .....+.     ...+.+ .++++|
T Consensus         3 ~~~~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~~i~-----~~~d~~-~l~~AD   75 (319)
T PTZ00117          3 VKRKKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHFSTLVGSNINIL-----GTNNYE-DIKDSD   75 (319)
T ss_pred             CCCcEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhhccccCCCeEEE-----eCCCHH-HhCCCC
Confidence            35689999997 999999999999888 7899999876432211111  11100 0111111     112334 568899


Q ss_pred             EEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCE-EEEEeccc
Q 025755           80 GVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKR-VVVVSSIG  130 (248)
Q Consensus        80 ~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-iV~vSS~~  130 (248)
                      +||.++|......  ..-.+.+..|..-.+.+.+.+.+..... +|++|-..
T Consensus        76 iVVitag~~~~~g--~~r~dll~~n~~i~~~i~~~i~~~~p~a~vivvsNP~  125 (319)
T PTZ00117         76 VVVITAGVQRKEE--MTREDLLTINGKIMKSVAESVKKYCPNAFVICVTNPL  125 (319)
T ss_pred             EEEECCCCCCCCC--CCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecChH
Confidence            9999998754321  2225677888887888888888875444 67766533

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=97.60  E-value=0.00032  Score=53.52  Aligned_cols=57  Identities=18%  Similarity=0.099  Sum_probs=48.2

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEE
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVF   82 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi   82 (248)
                      ++.+|+|+|.|++..+|..+++.|.++|++|+++.|+.                            +++.+.++++|+||
T Consensus        41 ~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~----------------------------~~l~~~l~~aDiVI   92 (168)
T cd01080          41 DLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKT----------------------------KNLKEHTKQADIVI   92 (168)
T ss_pred             CCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCc----------------------------hhHHHHHhhCCEEE
Confidence            47899999999988889999999999999999888752                            35666778899999


Q ss_pred             Ecccc
Q 025755           83 HVACP   87 (248)
Q Consensus        83 ~~ag~   87 (248)
                      .+.+.
T Consensus        93 sat~~   97 (168)
T cd01080          93 VAVGK   97 (168)
T ss_pred             EcCCC
Confidence            88764

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=97.60  E-value=0.00048  Score=57.26  Aligned_cols=75  Identities=25%  Similarity=0.228  Sum_probs=49.1

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCC-eEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEE
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGY-MVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVF   82 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi   82 (248)
                      ..+|+++|.|+ ||.|++++..|++.|. +|++++|+..+. +...+.+........+...     +++...+++.|+||
T Consensus       125 ~~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka-~~la~~l~~~~~~~~~~~~-----~~~~~~~~~aDiVI  197 (284)
T PRK12549        125 ASLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARA-AALADELNARFPAARATAG-----SDLAAALAAADGLV  197 (284)
T ss_pred             ccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHH-HHHHHHHHhhCCCeEEEec-----cchHhhhCCCCEEE
Confidence            46789999997 5699999999999997 799999986432 2222222222222222211     23344567899999


Q ss_pred             Ecc
Q 025755           83 HVA   85 (248)
Q Consensus        83 ~~a   85 (248)
                      |+.
T Consensus       198 naT  200 (284)
T PRK12549        198 HAT  200 (284)
T ss_pred             ECC
Confidence            994

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent

Probab=97.60  E-value=0.0011  Score=55.68  Aligned_cols=116  Identities=18%  Similarity=0.082  Sum_probs=75.6

Q ss_pred             EEEEEcCccHHHHHHHHHHHHCCC--eEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEEcc
Q 025755            8 RVCVTGAGGYIASWLVKYLLLKGY--MVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFHVA   85 (248)
Q Consensus         8 ~vlVtG~~g~iG~~~~~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~~a   85 (248)
                      ||.|+|++|.||+.++-.|+..+.  ++++++++...+....+...   ..........  +.+++...+++.|+||-+|
T Consensus         1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~a~g~a~DL~~~---~~~~~i~~~~--~~~~~~~~~~daDivvita   75 (312)
T TIGR01772         1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAGAAGVAADLSHI---PTAASVKGFS--GEEGLENALKGADVVVIPA   75 (312)
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCCCcEEEchhhcC---CcCceEEEec--CCCchHHHcCCCCEEEEeC
Confidence            589999999999999999998875  78888886522221111111   1111222101  1123456788999999999


Q ss_pred             ccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCC-CEEEEEeccc
Q 025755           86 CPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKV-KRVVVVSSIG  130 (248)
Q Consensus        86 g~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~-~~iV~vSS~~  130 (248)
                      |.....  ...-.+.++.|..-.+.+.+...+... ..+|.+|-..
T Consensus        76 G~~~~~--g~~R~dll~~N~~I~~~i~~~i~~~~p~~iiivvsNPv  119 (312)
T TIGR01772        76 GVPRKP--GMTRDDLFNVNAGIVKDLVAAVAESCPKAMILVITNPV  119 (312)
T ss_pred             CCCCCC--CccHHHHHHHhHHHHHHHHHHHHHhCCCeEEEEecCch
Confidence            975432  122356889999999999999988854 3556666544

Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.

>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase

Probab=97.59  E-value=0.00028  Score=60.99  Aligned_cols=99  Identities=19%  Similarity=0.201  Sum_probs=62.0

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHC-CCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHH-hCCCCEEE
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLK-GYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAA-TAGCTGVF   82 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~-~~~id~vi   82 (248)
                      ++++|.|.||||.+|.++++.|.++ +.+|..+.++....+... ..      .......|+.+.++++.. ++++|+|+
T Consensus        37 ~~~kVaIvGATG~vG~eLlrlL~~hP~~el~~l~s~~saG~~i~-~~------~~~l~~~~~~~~~~~~~~~~~~~DvVf  109 (381)
T PLN02968         37 EKKRIFVLGASGYTGAEVRRLLANHPDFEITVMTADRKAGQSFG-SV------FPHLITQDLPNLVAVKDADFSDVDAVF  109 (381)
T ss_pred             cccEEEEECCCChHHHHHHHHHHhCCCCeEEEEEChhhcCCCch-hh------CccccCccccceecCCHHHhcCCCEEE
Confidence            4569999999999999999999998 678888877543221100 00      111122333322222222 47899999


Q ss_pred             EccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccc
Q 025755           83 HVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIG  130 (248)
Q Consensus        83 ~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~  130 (248)
                      -+.+..                  .+..+++.+ +.+ .++|-+||..
T Consensus       110 ~Alp~~------------------~s~~i~~~~-~~g-~~VIDlSs~f  137 (381)
T PLN02968        110 CCLPHG------------------TTQEIIKAL-PKD-LKIVDLSADF  137 (381)
T ss_pred             EcCCHH------------------HHHHHHHHH-hCC-CEEEEcCchh
Confidence            876421                  456677776 334 5899998854

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=97.59  E-value=0.00027  Score=58.58  Aligned_cols=75  Identities=20%  Similarity=0.128  Sum_probs=50.4

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCC-CeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEE
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKG-YMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVF   82 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi   82 (248)
                      +++|+++|+|+ |++|++++..|.+.| .+|++++|+.++. ....+.+... ..+.+   ++    +....+.+.|+||
T Consensus       121 ~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a-~~l~~~~~~~-~~~~~---~~----~~~~~~~~~DivI  190 (278)
T PRK00258        121 LKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERA-EELAKLFGAL-GKAEL---DL----ELQEELADFDLII  190 (278)
T ss_pred             CCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHH-HHHHHHhhhc-cceee---cc----cchhccccCCEEE
Confidence            57899999997 999999999999999 7999999986432 2222222111 11121   11    2234556789999


Q ss_pred             EccccC
Q 025755           83 HVACPV   88 (248)
Q Consensus        83 ~~ag~~   88 (248)
                      |+....
T Consensus       191 naTp~g  196 (278)
T PRK00258        191 NATSAG  196 (278)
T ss_pred             ECCcCC
Confidence            997644

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=97.57  E-value=0.0002  Score=59.38  Aligned_cols=80  Identities=19%  Similarity=0.157  Sum_probs=59.8

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEEc
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFHV   84 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~~   84 (248)
                      .-..++|-||+|+.|.-++++|+++|.+-.+..||..+  ...+....  ..+..  ..++.+++.++..+...++|+||
T Consensus         5 ~e~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~k--l~~l~~~L--G~~~~--~~p~~~p~~~~~~~~~~~VVlnc   78 (382)
T COG3268           5 REYDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAK--LDALRASL--GPEAA--VFPLGVPAALEAMASRTQVVLNC   78 (382)
T ss_pred             cceeEEEEccccchhHHHHHHHHHcCCchhhccCCHHH--HHHHHHhc--Ccccc--ccCCCCHHHHHHHHhcceEEEec
Confidence            34679999999999999999999999999888998742  22222211  12222  23444488899999999999999


Q ss_pred             cccCCC
Q 025755           85 ACPVPV   90 (248)
Q Consensus        85 ag~~~~   90 (248)
                      +|+...
T Consensus        79 vGPyt~   84 (382)
T COG3268          79 VGPYTR   84 (382)
T ss_pred             cccccc
Confidence            998764

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=97.50  E-value=0.0033  Score=49.53  Aligned_cols=105  Identities=17%  Similarity=0.165  Sum_probs=66.3

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCC-eEEEEEcCCCch-----------------h-hHHhhhhcCCCCCeEE--EE
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGY-MVHGTVRDPCDE-----------------K-NAHLKKLEGASENLQL--FK   62 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~-----------------~-~~~~~~~~~~~~~~~~--~~   62 (248)
                      +++++|+|.| .|++|+++++.|+..|. ++++++++.-+.                 + ....+.+....+.+.+  +.
T Consensus        19 l~~~~VlviG-~GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~   97 (202)
T TIGR02356        19 LLNSHVLIIG-AGGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTALK   97 (202)
T ss_pred             hcCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEEeh
Confidence            5678999998 66799999999999996 889988763111                 0 1111222232344433  33


Q ss_pred             ccCCCHHHHHHHhCCCCEEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEec
Q 025755           63 TDLLDYEALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSS  128 (248)
Q Consensus        63 ~Di~d~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS  128 (248)
                      .++ +.+.+..++++.|+||.+...                 ...-..+.+.+++.+. .+|+.+.
T Consensus        98 ~~i-~~~~~~~~~~~~D~Vi~~~d~-----------------~~~r~~l~~~~~~~~i-p~i~~~~  144 (202)
T TIGR02356        98 ERV-TAENLELLINNVDLVLDCTDN-----------------FATRYLINDACVALGT-PLISAAV  144 (202)
T ss_pred             hcC-CHHHHHHHHhCCCEEEECCCC-----------------HHHHHHHHHHHHHcCC-CEEEEEe
Confidence            444 345677788899999977521                 1222346677777764 5666654

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]

Probab=97.49  E-value=0.0028  Score=52.94  Aligned_cols=112  Identities=20%  Similarity=0.148  Sum_probs=71.8

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCC--CeEEEEEcCCCchhhHH--hhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEE
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKG--YMVHGTVRDPCDEKNAH--LKKLEGASENLQLFKTDLLDYEALCAATAGCTGVF   82 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g--~~V~~~~r~~~~~~~~~--~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi   82 (248)
                      +||.|+|+ |+||+.++..|+.++  .++++++......+-..  +.........-..+.+| .|    .+.+++.|+|+
T Consensus         1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~~i~~~-~~----y~~~~~aDiVv   74 (313)
T COG0039           1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSDVKITGD-GD----YEDLKGADIVV   74 (313)
T ss_pred             CeEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccCceEEecC-CC----hhhhcCCCEEE
Confidence            58999999 999999999998776  38999998843211111  11111100011122222 22    34467899999


Q ss_pred             EccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEE
Q 025755           83 HVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVV  126 (248)
Q Consensus        83 ~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~v  126 (248)
                      -.||......+  .=.+.++.|..-...+.+...+....-+|.+
T Consensus        75 itAG~prKpGm--tR~DLl~~Na~I~~~i~~~i~~~~~d~ivlV  116 (313)
T COG0039          75 ITAGVPRKPGM--TRLDLLEKNAKIVKDIAKAIAKYAPDAIVLV  116 (313)
T ss_pred             EeCCCCCCCCC--CHHHHHHhhHHHHHHHHHHHHhhCCCeEEEE
Confidence            99987654322  2257889999999999999988865444444

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=97.47  E-value=0.00052  Score=57.09  Aligned_cols=70  Identities=17%  Similarity=0.116  Sum_probs=50.5

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEE
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVF   82 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi   82 (248)
                      ++.+++++|+|. |.+|+.+++.|...|++|++++|+..+.. . ....     ...     ..+.+++...+++.|+||
T Consensus       148 ~l~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~-~-~~~~-----g~~-----~~~~~~l~~~l~~aDiVi  214 (287)
T TIGR02853       148 TIHGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLA-R-ITEM-----GLI-----PFPLNKLEEKVAEIDIVI  214 (287)
T ss_pred             CCCCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHH-H-HHHC-----CCe-----eecHHHHHHHhccCCEEE
Confidence            367899999999 66999999999999999999999863211 1 1110     111     112456777888999999


Q ss_pred             Ecc
Q 025755           83 HVA   85 (248)
Q Consensus        83 ~~a   85 (248)
                      ++.
T Consensus       215 nt~  217 (287)
T TIGR02853       215 NTI  217 (287)
T ss_pred             ECC
Confidence            976

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=97.46  E-value=0.00058  Score=56.36  Aligned_cols=75  Identities=17%  Similarity=0.143  Sum_probs=49.4

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEE
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFH   83 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~   83 (248)
                      .++|+++|+|+ |++|++++..|++.|++|++++|+..+. ....+.+.. .+.+.....|     +  ....++|+||+
T Consensus       115 ~~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~-~~la~~~~~-~~~~~~~~~~-----~--~~~~~~DivIn  184 (270)
T TIGR00507       115 RPNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKA-EELAERFQR-YGEIQAFSMD-----E--LPLHRVDLIIN  184 (270)
T ss_pred             ccCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHHHhh-cCceEEechh-----h--hcccCccEEEE
Confidence            35789999998 7999999999999999999999886422 222222221 1222222111     1  12346899999


Q ss_pred             ccccC
Q 025755           84 VACPV   88 (248)
Q Consensus        84 ~ag~~   88 (248)
                      +.+..
T Consensus       185 atp~g  189 (270)
T TIGR00507       185 ATSAG  189 (270)
T ss_pred             CCCCC
Confidence            98764

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=97.45  E-value=0.00061  Score=56.43  Aligned_cols=56  Identities=11%  Similarity=0.001  Sum_probs=46.3

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEE
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVF   82 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi   82 (248)
                      ++++|+++|.|++|.+|+.++..|+++|++|+++.|..                            .++...+++.|+||
T Consensus       156 ~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t----------------------------~~L~~~~~~aDIvI  207 (283)
T PRK14192        156 ELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSRT----------------------------QNLPELVKQADIIV  207 (283)
T ss_pred             CCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCc----------------------------hhHHHHhccCCEEE
Confidence            37899999999999999999999999999999887632                            12444457889999


Q ss_pred             Eccc
Q 025755           83 HVAC   86 (248)
Q Consensus        83 ~~ag   86 (248)
                      ++.|
T Consensus       208 ~AtG  211 (283)
T PRK14192        208 GAVG  211 (283)
T ss_pred             EccC
Confidence            9986

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.44  E-value=0.00083  Score=59.50  Aligned_cols=79  Identities=15%  Similarity=0.029  Sum_probs=52.2

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-CCCEE
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-GCTGV   81 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-~id~v   81 (248)
                      ++++|+++|||+++ +|.++++.|++.|++|++.+++..... ...+.+..  ..+.+..++..  ..+   .. .+|.|
T Consensus         2 ~~~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~-~~~~~l~~--~g~~~~~~~~~--~~~---~~~~~d~v   72 (447)
T PRK02472          2 EYQNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSEN-PEAQELLE--EGIKVICGSHP--LEL---LDEDFDLM   72 (447)
T ss_pred             CcCCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccch-hHHHHHHh--cCCEEEeCCCC--HHH---hcCcCCEE
Confidence            37899999999987 999999999999999999987653211 11122222  13344333221  222   23 48999


Q ss_pred             EEccccCCC
Q 025755           82 FHVACPVPV   90 (248)
Q Consensus        82 i~~ag~~~~   90 (248)
                      |+++|+...
T Consensus        73 V~s~gi~~~   81 (447)
T PRK02472         73 VKNPGIPYT   81 (447)
T ss_pred             EECCCCCCC
Confidence            999987643

>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases

Probab=97.43  E-value=0.0053  Score=51.60  Aligned_cols=164  Identities=15%  Similarity=0.146  Sum_probs=95.9

Q ss_pred             EEEEEcCccHHHHHHHHHHHHCCC--eEEEEEcCCCchhhHH--hhhhcCCC--CCeEEEEccCCCHHHHHHHhCCCCEE
Q 025755            8 RVCVTGAGGYIASWLVKYLLLKGY--MVHGTVRDPCDEKNAH--LKKLEGAS--ENLQLFKTDLLDYEALCAATAGCTGV   81 (248)
Q Consensus         8 ~vlVtG~~g~iG~~~~~~l~~~g~--~V~~~~r~~~~~~~~~--~~~~~~~~--~~~~~~~~Di~d~~~~~~~~~~id~v   81 (248)
                      ||.|.|+ |.+|..++..|+..+.  ++++++.+.+...-..  +.......  .++.+...|   .    ..+++.|+|
T Consensus         1 Ki~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~~~---y----~~~~~aDiv   72 (307)
T cd05290           1 KLVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRAGD---Y----DDCADADII   72 (307)
T ss_pred             CEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEECC---H----HHhCCCCEE
Confidence            5789998 9999999999998874  7899998664222221  22111111  234444333   2    446789999


Q ss_pred             EEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEE-EeccceeccC-----CCCCCCCccCCCCCCchhhh
Q 025755           82 FHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVV-VSSIGAVMLN-----PNWPKGQVMDEECWSDEEFC  155 (248)
Q Consensus        82 i~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~-vSS~~~~~~~-----~~~~~~~~~~e~~~~~~~~~  155 (248)
                      |-.||.........+=.+.++.|..-.+.+.+.+.+.+...++. +|-.......     .+++....            
T Consensus        73 vitaG~~~kpg~tr~R~dll~~N~~I~~~i~~~i~~~~p~~i~ivvsNPvDv~t~~~~k~sg~p~~rv------------  140 (307)
T cd05290          73 VITAGPSIDPGNTDDRLDLAQTNAKIIREIMGNITKVTKEAVIILITNPLDIAVYIAATEFDYPANKV------------  140 (307)
T ss_pred             EECCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecCcHHHHHHHHHHHhCcChhhe------------
Confidence            99999754322111115788999999999999999886544444 4433211110     00000000            


Q ss_pred             ccccchHHH-HHHHHHHHHHHHHHhCCccEEEEccCeeecCCCC
Q 025755          156 KATENYYCL-AKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQ  198 (248)
Q Consensus       156 ~~~~~~Y~~-sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~  198 (248)
                            .|. +-.-+-++...++++.+++...|+- +|.|.+..
T Consensus       141 ------iG~gt~LDs~R~~~~la~~l~v~~~~V~~-~ViGeHGd  177 (307)
T cd05290         141 ------IGTGTMLDTARLRRIVADKYGVDPKNVTG-YVLGEHGS  177 (307)
T ss_pred             ------ecccchHHHHHHHHHHHHHhCCCcccEEE-EEEecCCC
Confidence                  111 1134455566666666777777765 48887644

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=97.43  E-value=0.00071  Score=59.98  Aligned_cols=72  Identities=17%  Similarity=0.141  Sum_probs=56.6

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHH-hCCCCEEEEcc
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAA-TAGCTGVFHVA   85 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~-~~~id~vi~~a   85 (248)
                      |+|+|.|+ |.+|+++++.|.++|++|++++++...     .+.+.. ...+.++.+|.++.+.++++ ++++|.||-+.
T Consensus         1 m~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~-----~~~~~~-~~~~~~~~gd~~~~~~l~~~~~~~a~~vi~~~   73 (453)
T PRK09496          1 MKIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEER-----LRRLQD-RLDVRTVVGNGSSPDVLREAGAEDADLLIAVT   73 (453)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHH-----HHHHHh-hcCEEEEEeCCCCHHHHHHcCCCcCCEEEEec
Confidence            47899987 999999999999999999999987632     111111 13578889999999999888 77888887665

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=97.42  E-value=0.0012  Score=54.22  Aligned_cols=164  Identities=16%  Similarity=0.018  Sum_probs=96.4

Q ss_pred             EEEEcCccHHHHHHHHHHHHCC----CeEEEEEcCCCchhh--HHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEE
Q 025755            9 VCVTGAGGYIASWLVKYLLLKG----YMVHGTVRDPCDEKN--AHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVF   82 (248)
Q Consensus         9 vlVtG~~g~iG~~~~~~l~~~g----~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi   82 (248)
                      |.|+|++|.+|..++..|+..|    .+|++++++.+....  ..++......     ....++-.+++...++++|+||
T Consensus         1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~-----~~~~i~~~~d~~~~~~~aDiVv   75 (263)
T cd00650           1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPL-----ADIKVSITDDPYEAFKDADVVI   75 (263)
T ss_pred             CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhc-----cCcEEEECCchHHHhCCCCEEE
Confidence            5799999999999999999988    789999987643222  1122111111     1112221223556678999999


Q ss_pred             EccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCC-CEEEEEeccceeccC-----CCCCCCCccCCCCCCchhhhc
Q 025755           83 HVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKV-KRVVVVSSIGAVMLN-----PNWPKGQVMDEECWSDEEFCK  156 (248)
Q Consensus        83 ~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~-~~iV~vSS~~~~~~~-----~~~~~~~~~~e~~~~~~~~~~  156 (248)
                      ..++......  ..-......|+.-.+.+.+.+.+... ..+|.+|-.......     .+++...              
T Consensus        76 ~t~~~~~~~g--~~r~~~~~~n~~i~~~i~~~i~~~~p~a~~i~~tNP~d~~t~~~~~~sg~~~~k--------------  139 (263)
T cd00650          76 ITAGVGRKPG--MGRLDLLKRNVPIVKEIGDNIEKYSPDAWIIVVSNPVDIITYLVWRYSGLPKEK--------------  139 (263)
T ss_pred             ECCCCCCCcC--CCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHHHHHHHHHHHhCCCchh--------------
Confidence            9998754431  22245678888888999999988744 345555432211100     0000000              


Q ss_pred             cccchHHHHHHHHHHHHHHHHHhCCccEEEEccCeeecCCCC
Q 025755          157 ATENYYCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQ  198 (248)
Q Consensus       157 ~~~~~Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~  198 (248)
                          ..|..-.-.-++...+++..+++...|. +.++|.+..
T Consensus       140 ----viG~~~ld~~r~~~~la~~l~v~~~~v~-~~v~G~hg~  176 (263)
T cd00650         140 ----VIGLGTLDPIRFRRILAEKLGVDPDDVK-VYILGEHGG  176 (263)
T ss_pred             ----EEEeecchHHHHHHHHHHHhCCCccceE-EEEEEcCCC
Confidence                0111112334445556666678778888 788887654

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=97.41  E-value=0.00062  Score=65.48  Aligned_cols=77  Identities=19%  Similarity=0.150  Sum_probs=58.4

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCC-Ce-------------EEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHH
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKG-YM-------------VHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEA   70 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g-~~-------------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~   70 (248)
                      ++|+|+|.|+ |+||+..++.|++.. ++             |++.+++..+. +...+    ..+++..++.|+.|.++
T Consensus       568 ~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a-~~la~----~~~~~~~v~lDv~D~e~  641 (1042)
T PLN02819        568 KSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDA-KETVE----GIENAEAVQLDVSDSES  641 (1042)
T ss_pred             cCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHH-HHHHH----hcCCCceEEeecCCHHH
Confidence            4789999997 999999999998753 33             77777665321 11111    12357789999999999


Q ss_pred             HHHHhCCCCEEEEcccc
Q 025755           71 LCAATAGCTGVFHVACP   87 (248)
Q Consensus        71 ~~~~~~~id~vi~~ag~   87 (248)
                      +.++++++|+||++.-.
T Consensus       642 L~~~v~~~DaVIsalP~  658 (1042)
T PLN02819        642 LLKYVSQVDVVISLLPA  658 (1042)
T ss_pred             HHHhhcCCCEEEECCCc
Confidence            99999999999999854

>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional

Probab=97.41  E-value=0.0012  Score=56.22  Aligned_cols=92  Identities=18%  Similarity=0.146  Sum_probs=56.1

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCCe---EEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEE
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGYM---VHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVF   82 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~~---V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi   82 (248)
                      |++|+|.||||.+|+++++.|.+++|.   +..+.+.....+...   +    ........|+.+.     .++++|+||
T Consensus         1 ~~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~~g~~l~---~----~g~~i~v~d~~~~-----~~~~vDvVf   68 (334)
T PRK14874          1 GYNVAVVGATGAVGREMLNILEERNFPVDKLRLLASARSAGKELS---F----KGKELKVEDLTTF-----DFSGVDIAL   68 (334)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccccCCCeee---e----CCceeEEeeCCHH-----HHcCCCEEE
Confidence            468999999999999999999998764   466665543221111   1    1123334455432     235799999


Q ss_pred             EccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEec
Q 025755           83 HVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSS  128 (248)
Q Consensus        83 ~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS  128 (248)
                      -+++..                  .+..+++.+.+.|. .+|-.||
T Consensus        69 ~A~g~g------------------~s~~~~~~~~~~G~-~VIDlS~   95 (334)
T PRK14874         69 FSAGGS------------------VSKKYAPKAAAAGA-VVIDNSS   95 (334)
T ss_pred             ECCChH------------------HHHHHHHHHHhCCC-EEEECCc
Confidence            777532                  13345555555554 5666665

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=97.39  E-value=0.0025  Score=56.52  Aligned_cols=76  Identities=26%  Similarity=0.325  Sum_probs=57.3

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHH-hCCCCEEE
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAA-TAGCTGVF   82 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~-~~~id~vi   82 (248)
                      ..+++++|.|+ |.+|+.+++.|.+.|++|++++++.+.  ..   .+.....++.++.+|.++.+.++++ ++++|.||
T Consensus       229 ~~~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~--~~---~~~~~~~~~~~i~gd~~~~~~L~~~~~~~a~~vi  302 (453)
T PRK09496        229 KPVKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPER--AE---ELAEELPNTLVLHGDGTDQELLEEEGIDEADAFI  302 (453)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHH--HH---HHHHHCCCCeEEECCCCCHHHHHhcCCccCCEEE
Confidence            34689999999 999999999999999999999988632  11   1111124577899999999988664 45788887


Q ss_pred             Ecc
Q 025755           83 HVA   85 (248)
Q Consensus        83 ~~a   85 (248)
                      -+.
T Consensus       303 ~~~  305 (453)
T PRK09496        303 ALT  305 (453)
T ss_pred             ECC
Confidence            444

>PF08643 DUF1776: Fungal family of unknown function (DUF1776); InterPro: IPR013952 This is a fungal protein of unknown function

Probab=97.34  E-value=0.0021  Score=53.33  Aligned_cols=168  Identities=15%  Similarity=0.161  Sum_probs=99.7

Q ss_pred             CcEEEEEcC-ccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHH----HHHHh---CC
Q 025755            6 KERVCVTGA-GGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEA----LCAAT---AG   77 (248)
Q Consensus         6 ~k~vlVtG~-~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~----~~~~~---~~   77 (248)
                      ...|+|.|. +-=+++.++..|-++|+-|+++..+.++.  ...+. +. ..+++....|..|+.+    +.++.   +.
T Consensus         3 ~evVvI~Gs~~~PltR~la~DLeRRGFIV~v~~~~~ed~--~~ve~-e~-~~dI~~L~ld~~~~~~~~~~l~~f~~~L~~   78 (299)
T PF08643_consen    3 KEVVVIAGSPHDPLTRSLALDLERRGFIVYVTVSSAEDE--KYVES-ED-RPDIRPLWLDDSDPSSIHASLSRFASLLSR   78 (299)
T ss_pred             eeEEEEECCCCCccHHHHHHHHhhCCeEEEEEeCCHHHH--HHHHh-cc-CCCCCCcccCCCCCcchHHHHHHHHHHhcC
Confidence            468999994 78999999999999999999999876422  21221 11 4557777777755443    33332   21


Q ss_pred             C--------CEEEEccccC-------CCC---C-CCCccccchhhhHHHHHHHHHHHHhc------CCCEEEEE-eccce
Q 025755           78 C--------TGVFHVACPV-------PVG---K-VPNPEVQLIDPAVVGTKNVLNSCVKA------KVKRVVVV-SSIGA  131 (248)
Q Consensus        78 i--------d~vi~~ag~~-------~~~---~-~~~~~~~~~~~n~~g~~~~~~~~~~~------~~~~iV~v-SS~~~  131 (248)
                      .        -...+..|+.       +.+   . ..+.|.+.++.|+.-...+++.+.+.      +-.++|.+ -|...
T Consensus        79 p~~p~~~~~~h~l~L~svi~~Psl~yp~gPie~i~~s~~~~~ln~~ll~~~~~~q~lLPlL~~~~~~~~~iil~~Psi~s  158 (299)
T PF08643_consen   79 PHVPFPGAPPHHLQLKSVIFIPSLSYPTGPIETISPSSWADELNTRLLTPILTIQGLLPLLRSRSNQKSKIILFNPSISS  158 (299)
T ss_pred             CCCCCCCCCCceeEEEEEEEecCCCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEeCchhh
Confidence            1        1122333321       111   1 12345566787877766555555432      22455554 45433


Q ss_pred             eccCCCCCCCCccCCCCCCchhhhccccchHHHHHHHHHHHHHHHHHhCCccEEEEccCeeecC
Q 025755          132 VMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGP  195 (248)
Q Consensus       132 ~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~  195 (248)
                      -...|..++           +      ....+.-+.+.+.|.+|+... +++|+.++.|++.=.
T Consensus       159 sl~~Pfhsp-----------E------~~~~~al~~~~~~LrrEl~~~-~I~V~~i~LG~l~i~  204 (299)
T PF08643_consen  159 SLNPPFHSP-----------E------SIVSSALSSFFTSLRRELRPH-NIDVTQIKLGNLDIG  204 (299)
T ss_pred             ccCCCccCH-----------H------HHHHHHHHHHHHHHHHHhhhc-CCceEEEEeeeeccc
Confidence            333333222           1      122556667899999998855 499999999987655

One of the proteins P32792 from SWISSPROT has been localised to the mitochondria [].

>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate

Probab=97.34  E-value=0.0017  Score=46.74  Aligned_cols=96  Identities=22%  Similarity=0.239  Sum_probs=55.1

Q ss_pred             EEEEEcCccHHHHHHHHHHHHCC-CeEEEE-EcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEEcc
Q 025755            8 RVCVTGAGGYIASWLVKYLLLKG-YMVHGT-VRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFHVA   85 (248)
Q Consensus         8 ~vlVtG~~g~iG~~~~~~l~~~g-~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~~a   85 (248)
                      ||.|+|+||.+|+.+++.|.++- ++++.+ .++....+ ............-.....| .+.+.+    .++|+||.|.
T Consensus         1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~-~~~~~~----~~~Dvvf~a~   74 (121)
T PF01118_consen    1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGK-PLSEVFPHPKGFEDLSVED-ADPEEL----SDVDVVFLAL   74 (121)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTS-BHHHTTGGGTTTEEEBEEE-TSGHHH----TTESEEEE-S
T ss_pred             CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCC-eeehhccccccccceeEee-cchhHh----hcCCEEEecC
Confidence            68999999999999999999964 465544 44431221 1111111111111222222 344443    7899999886


Q ss_pred             ccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEec
Q 025755           86 CPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSS  128 (248)
Q Consensus        86 g~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS  128 (248)
                      +.                  ..+..+.+.+.+.+. ++|-.|+
T Consensus        75 ~~------------------~~~~~~~~~~~~~g~-~ViD~s~   98 (121)
T PF01118_consen   75 PH------------------GASKELAPKLLKAGI-KVIDLSG   98 (121)
T ss_dssp             CH------------------HHHHHHHHHHHHTTS-EEEESSS
T ss_pred             ch------------------hHHHHHHHHHhhCCc-EEEeCCH
Confidence            42                  224556777777775 7777765

This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=97.29  E-value=0.0021  Score=53.49  Aligned_cols=81  Identities=17%  Similarity=0.117  Sum_probs=50.0

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCC-eEEEEEcCCC--chhhHHhhhhcCCC-CCeEEEEccCCCHHHHHHHhCCCC
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGY-MVHGTVRDPC--DEKNAHLKKLEGAS-ENLQLFKTDLLDYEALCAATAGCT   79 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~-~V~~~~r~~~--~~~~~~~~~~~~~~-~~~~~~~~Di~d~~~~~~~~~~id   79 (248)
                      +++|+++|.|+ ||.+++++-.|+..|. +|++++|+..  +..+...+.+.... ..+.+  .++.+.+.+...+.+.|
T Consensus       122 ~~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~~~~--~~~~~~~~l~~~~~~aD  198 (288)
T PRK12749        122 IKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTV--TDLADQQAFAEALASAD  198 (288)
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhccCceEEE--echhhhhhhhhhcccCC
Confidence            56789999997 5569999999999896 8999999853  12222222222111 11222  22222223445566889


Q ss_pred             EEEEcccc
Q 025755           80 GVFHVACP   87 (248)
Q Consensus        80 ~vi~~ag~   87 (248)
                      +|||+..+
T Consensus       199 ivINaTp~  206 (288)
T PRK12749        199 ILTNGTKV  206 (288)
T ss_pred             EEEECCCC
Confidence            99998644

>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent

Probab=97.29  E-value=0.0066  Score=52.45  Aligned_cols=167  Identities=11%  Similarity=-0.038  Sum_probs=94.5

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCC-e----EEE--E--EcCCCchhhHHhh--hhc-CCCCCeEEEEccCCCHHHHHH
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGY-M----VHG--T--VRDPCDEKNAHLK--KLE-GASENLQLFKTDLLDYEALCA   73 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~-~----V~~--~--~r~~~~~~~~~~~--~~~-~~~~~~~~~~~Di~d~~~~~~   73 (248)
                      .-+|.|+|++|.+|++++-.|+..+. .    +.+  +  +++.+...-..+.  ... ....++.+. .  .+    ..
T Consensus        44 p~KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~~v~i~-~--~~----y~  116 (387)
T TIGR01757        44 TVNVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLREVSIG-I--DP----YE  116 (387)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcCceEEe-c--CC----HH
Confidence            35899999999999999999998763 2    333  3  5544322211111  111 111122111 1  12    24


Q ss_pred             HhCCCCEEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcC-C-CEEEEEeccceeccC-----CCCCCCCccCC
Q 025755           74 ATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAK-V-KRVVVVSSIGAVMLN-----PNWPKGQVMDE  146 (248)
Q Consensus        74 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~-~-~~iV~vSS~~~~~~~-----~~~~~~~~~~e  146 (248)
                      .+++.|+||-.||.....  ..+-.+.++.|..-.+.+.+.+.+.. . ..+|.+|-..-+.-.     ....+...+  
T Consensus       117 ~~kdaDIVVitAG~prkp--g~tR~dll~~N~~I~k~i~~~I~~~a~~~~iviVVsNPvDv~t~v~~k~sg~~~~rvi--  192 (387)
T TIGR01757       117 VFEDADWALLIGAKPRGP--GMERADLLDINGQIFADQGKALNAVASKNCKVLVVGNPCNTNALIAMKNAPNIPRKNF--  192 (387)
T ss_pred             HhCCCCEEEECCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCcHHHHHHHHHHHcCCCcccEE--
Confidence            577899999999975432  22235788999999999999998853 3 456666643211110     000000000  


Q ss_pred             CCCCchhhhccccchHHHHHHHHHHHHHHHHHhCCccEEEEccCeeecCCCC
Q 025755          147 ECWSDEEFCKATENYYCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQ  198 (248)
Q Consensus       147 ~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~  198 (248)
                                     =..+..-+-++...++++.+++...|+-++|.|.+..
T Consensus       193 ---------------G~gT~LDsaR~r~~LA~~l~v~~~~V~~~~V~GeHGd  229 (387)
T TIGR01757       193 ---------------HALTRLDENRAKCQLALKSGKFYTSVSNVTIWGNHST  229 (387)
T ss_pred             ---------------EecchhHHHHHHHHHHHHHCcChhHcceeEEEecCCC
Confidence                           1122234455666666666677777766778887654

This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.

>cd05295 MDH_like Malate dehydrogenase-like

Probab=97.28  E-value=0.00085  Score=58.86  Aligned_cols=167  Identities=15%  Similarity=0.086  Sum_probs=99.5

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHC---C--Ce--EEEEEcCC-CchhhHHhhhhcC----CCCCeEEEEccCCCHHHHHH
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLK---G--YM--VHGTVRDP-CDEKNAHLKKLEG----ASENLQLFKTDLLDYEALCA   73 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~---g--~~--V~~~~r~~-~~~~~~~~~~~~~----~~~~~~~~~~Di~d~~~~~~   73 (248)
                      .-+|+||||+|.||.++.-.+++-   |  ..  +++++... .+......-.+..    ....+.+. .      ....
T Consensus       123 p~~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~~~~~~l~G~amDL~D~a~pll~~v~i~-~------~~~e  195 (452)
T cd05295         123 PLQVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSPENLEKLKGLVMEVEDLAFPLLRGISVT-T------DLDV  195 (452)
T ss_pred             ceEEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCCCchhhHHHHHHHHHHhHHhhcCCcEEE-E------CCHH
Confidence            357999999999999999999863   3  23  44455521 1111111111111    01122222 1      1245


Q ss_pred             HhCCCCEEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCC--CEEEEEec-cceecc------CCCCCCCCcc
Q 025755           74 ATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKV--KRVVVVSS-IGAVML------NPNWPKGQVM  144 (248)
Q Consensus        74 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~--~~iV~vSS-~~~~~~------~~~~~~~~~~  144 (248)
                      .++++|+||-.||.....  ..+-.+.++.|..-...+.+...+...  .+|+.+.| ..-...      .++++.    
T Consensus       196 a~~daDvvIitag~prk~--G~~R~DLL~~N~~Ifk~~g~~I~~~a~~~~~VlVv~tNPvD~~t~i~~k~apgiP~----  269 (452)
T cd05295         196 AFKDAHVIVLLDDFLIKE--GEDLEGCIRSRVAICQLYGPLIEKNAKEDVKVIVAGRTFLNLKTSILIKYAPSIPR----  269 (452)
T ss_pred             HhCCCCEEEECCCCCCCc--CCCHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHHHHcCCCCH----
Confidence            678999999999975432  123357889999999999999988854  56776664 111100      011111    


Q ss_pred             CCCCCCchhhhccccchHHHHHHHHHHHHHHHHHhCCccEEEEccCeeecCCCCC
Q 025755          145 DEECWSDEEFCKATENYYCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQP  199 (248)
Q Consensus       145 ~e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~  199 (248)
                                    .+.-|.+....-++...++++.++++..|+-..|.|.+...
T Consensus       270 --------------~rVig~gtlds~R~r~~LA~kl~V~~~~V~~~~VwGeHG~s  310 (452)
T cd05295         270 --------------KNIIAVARLQENRAKALLARKLNVNSAGIKDVIVWGNIGGN  310 (452)
T ss_pred             --------------HHEEEecchHHHHHHHHHHHHhCcCHHHceeeEEEEccCCc
Confidence                          11134444556777777888878888888777888865543

These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases

Probab=97.26  E-value=0.011  Score=49.67  Aligned_cols=167  Identities=16%  Similarity=0.110  Sum_probs=95.0

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCC--CeEEEEEcCCCchhhHH--hhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEE
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKG--YMVHGTVRDPCDEKNAH--LKKLEGASENLQLFKTDLLDYEALCAATAGCTGVF   82 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g--~~V~~~~r~~~~~~~~~--~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi   82 (248)
                      ++|.|.|+ |.+|..++..|+..|  .+|++++++........  +..............   .|.    ..++++|+||
T Consensus         1 mkI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i~~---~d~----~~l~~aDiVi   72 (308)
T cd05292           1 MKVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIYA---GDY----ADCKGADVVV   72 (308)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCCeEEee---CCH----HHhCCCCEEE
Confidence            37999998 899999999999999  58999999764322111  111111111122222   222    2367899999


Q ss_pred             EccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCC-CEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccccch
Q 025755           83 HVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKV-KRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENY  161 (248)
Q Consensus        83 ~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~-~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~  161 (248)
                      .+++.....  .....+.+..|..-...+++.+.+.+. +.++.++.........-       -+.+-..+      ...
T Consensus        73 ita~~~~~~--~~~r~dl~~~n~~i~~~~~~~l~~~~~~giiiv~tNP~d~~~~~~-------~~~sg~p~------~~v  137 (308)
T cd05292          73 ITAGANQKP--GETRLDLLKRNVAIFKEIIPQILKYAPDAILLVVTNPVDVLTYVA-------YKLSGLPP------NRV  137 (308)
T ss_pred             EccCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHHHHHHHH-------HHHHCcCH------HHe
Confidence            999875432  233356788899888888888888754 34444443221111000       00000000      001


Q ss_pred             HHHHH-HHHHHHHHHHHHhCCccEEEEccCeeecCCC
Q 025755          162 YCLAK-TIAEIQALEYAKRGELDIVTVCPSIVIGPML  197 (248)
Q Consensus       162 Y~~sK-~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~  197 (248)
                      .|..- .-+-++...++++.+++...|+ ++|.|.+.
T Consensus       138 iG~gt~LDs~R~~~~la~~~~v~~~~v~-~~viGeHg  173 (308)
T cd05292         138 IGSGTVLDTARFRYLLGEHLGVDPRSVH-AYIIGEHG  173 (308)
T ss_pred             ecccchhhHHHHHHHHHHHhCCCcccee-ceeeccCC
Confidence            22211 1245666677777778888876 56888764

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=97.25  E-value=0.0021  Score=50.62  Aligned_cols=72  Identities=14%  Similarity=0.103  Sum_probs=47.8

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEE
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVF   82 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi   82 (248)
                      ++++|+|+|.|| |-+|...++.|++.|++|+++.+...+....    +.. ...+.+..-+.. .+    .+.+.|+||
T Consensus         7 ~l~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~~~~l~~----l~~-~~~i~~~~~~~~-~~----~l~~adlVi   75 (202)
T PRK06718          7 DLSNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPELTENLVK----LVE-EGKIRWKQKEFE-PS----DIVDAFLVI   75 (202)
T ss_pred             EcCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCCCHHHHH----HHh-CCCEEEEecCCC-hh----hcCCceEEE
Confidence            478999999998 7899999999999999999997654322111    111 134555443332 22    245678777


Q ss_pred             Ecc
Q 025755           83 HVA   85 (248)
Q Consensus        83 ~~a   85 (248)
                      -+.
T Consensus        76 aaT   78 (202)
T PRK06718         76 AAT   78 (202)
T ss_pred             EcC
Confidence            544

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=97.25  E-value=0.0016  Score=56.96  Aligned_cols=75  Identities=11%  Similarity=0.022  Sum_probs=53.8

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCC-eEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEE
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGY-MVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGV   81 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~v   81 (248)
                      .+.+++++|.|+ |++|+.+++.|.+.|. +++++.|+.... ....+.+.    .     +.....+++...+.+.|+|
T Consensus       178 ~l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra-~~La~~~~----~-----~~~~~~~~l~~~l~~aDiV  246 (414)
T PRK13940        178 NISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKA-QKITSAFR----N-----ASAHYLSELPQLIKKADII  246 (414)
T ss_pred             CccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHH-HHHHHHhc----C-----CeEecHHHHHHHhccCCEE
Confidence            367899999998 8899999999999995 788999886422 22222211    1     1223345677888899999


Q ss_pred             EEccccC
Q 025755           82 FHVACPV   88 (248)
Q Consensus        82 i~~ag~~   88 (248)
                      |++.+..
T Consensus       247 I~aT~a~  253 (414)
T PRK13940        247 IAAVNVL  253 (414)
T ss_pred             EECcCCC
Confidence            9998753

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=97.24  E-value=0.0014  Score=54.06  Aligned_cols=57  Identities=12%  Similarity=0.068  Sum_probs=48.4

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEE
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVF   82 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi   82 (248)
                      .+++|+++|+|.++-+|+-++..|+++|++|+++.+..                            .++.+.+++.|+||
T Consensus       155 ~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t----------------------------~~l~~~~~~ADIVI  206 (286)
T PRK14175        155 DLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRS----------------------------KDMASYLKDADVIV  206 (286)
T ss_pred             CCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc----------------------------hhHHHHHhhCCEEE
Confidence            37899999999999999999999999999999887532                            24666777889999


Q ss_pred             Ecccc
Q 025755           83 HVACP   87 (248)
Q Consensus        83 ~~ag~   87 (248)
                      ...|.
T Consensus       207 sAvg~  211 (286)
T PRK14175        207 SAVGK  211 (286)
T ss_pred             ECCCC
Confidence            88875

>PRK06223 malate dehydrogenase; Reviewed

Probab=97.22  E-value=0.0036  Score=52.63  Aligned_cols=114  Identities=18%  Similarity=0.095  Sum_probs=71.1

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCC-eEEEEEcCCCchhhHHhh--hhcCC-CCCeEEEEccCCCHHHHHHHhCCCCEE
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGY-MVHGTVRDPCDEKNAHLK--KLEGA-SENLQLFKTDLLDYEALCAATAGCTGV   81 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~~~~~--~~~~~-~~~~~~~~~Di~d~~~~~~~~~~id~v   81 (248)
                      |++|.|+|+ |.+|..++..++..|. +|++++++.+........  ..... .....+..  -.|   . ..++++|+|
T Consensus         2 ~~KI~VIGa-G~vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~dl~~~~~~~~~~~~i~~--~~d---~-~~~~~aDiV   74 (307)
T PRK06223          2 RKKISIIGA-GNVGATLAHLLALKELGDVVLFDIVEGVPQGKALDIAEAAPVEGFDTKITG--TND---Y-EDIAGSDVV   74 (307)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEEECCCchhHHHHHHHHhhhhhcCCCcEEEe--CCC---H-HHHCCCCEE
Confidence            479999999 9999999999998875 999999976432221111  11100 01111111  022   2 236789999


Q ss_pred             EEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCC-EEEEEec
Q 025755           82 FHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVK-RVVVVSS  128 (248)
Q Consensus        82 i~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~-~iV~vSS  128 (248)
                      |.++|.....  ...-.+.+..|+.-...+++.+.+.... .+|++|-
T Consensus        75 ii~~~~p~~~--~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~viv~tN  120 (307)
T PRK06223         75 VITAGVPRKP--GMSRDDLLGINAKIMKDVAEGIKKYAPDAIVIVVTN  120 (307)
T ss_pred             EECCCCCCCc--CCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence            9999864322  1122456678888888888888777443 4666654

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=97.22  E-value=0.0024  Score=54.51  Aligned_cols=77  Identities=18%  Similarity=0.109  Sum_probs=49.7

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC----CCCE
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA----GCTG   80 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~----~id~   80 (248)
                      ++++|||.||+|++|.+.++.+...|...+++.++.+  ..+..+.+..   +   ...|..+++-.+...+    ++|+
T Consensus       157 ~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e--~~~l~k~lGA---d---~vvdy~~~~~~e~~kk~~~~~~Dv  228 (347)
T KOG1198|consen  157 KGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKE--KLELVKKLGA---D---EVVDYKDENVVELIKKYTGKGVDV  228 (347)
T ss_pred             CCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccc--hHHHHHHcCC---c---EeecCCCHHHHHHHHhhcCCCccE
Confidence            5789999999999999999998888943444444432  2233333211   1   2245566544444433    5899


Q ss_pred             EEEccccCC
Q 025755           81 VFHVACPVP   89 (248)
Q Consensus        81 vi~~ag~~~   89 (248)
                      |+.|.|...
T Consensus       229 VlD~vg~~~  237 (347)
T KOG1198|consen  229 VLDCVGGST  237 (347)
T ss_pred             EEECCCCCc
Confidence            999998643

>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=97.19  E-value=0.0012  Score=55.59  Aligned_cols=34  Identities=24%  Similarity=0.218  Sum_probs=31.3

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCC
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPC   41 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~   41 (248)
                      ++|.|+| +|.+|..++..|+++|++|++++++..
T Consensus         3 ~~V~VIG-~G~mG~~iA~~la~~G~~V~v~d~~~~   36 (308)
T PRK06129          3 GSVAIIG-AGLIGRAWAIVFARAGHEVRLWDADPA   36 (308)
T ss_pred             cEEEEEC-ccHHHHHHHHHHHHCCCeeEEEeCCHH
Confidence            5799998 889999999999999999999999864

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=97.17  E-value=0.0023  Score=56.57  Aligned_cols=77  Identities=13%  Similarity=0.017  Sum_probs=54.4

Q ss_pred             CCCCcEEEEEcC----------------ccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCC
Q 025755            3 GEDKERVCVTGA----------------GGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLL   66 (248)
Q Consensus         3 ~l~~k~vlVtG~----------------~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~   66 (248)
                      .|+||+||||+|                ||-.|.++++.+..+|++|+++.-...         + .....+..+.  +.
T Consensus       253 ~l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~~---------~-~~p~~v~~i~--V~  320 (475)
T PRK13982        253 PLAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPVD---------L-ADPQGVKVIH--VE  320 (475)
T ss_pred             ccCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCcC---------C-CCCCCceEEE--ec
Confidence            388999999987                689999999999999999998863321         0 0123455554  34


Q ss_pred             CHHHHHHHhC---CCCEEEEccccCCCC
Q 025755           67 DYEALCAATA---GCTGVFHVACPVPVG   91 (248)
Q Consensus        67 d~~~~~~~~~---~id~vi~~ag~~~~~   91 (248)
                      ..+++..+++   ..|++|++|++....
T Consensus       321 ta~eM~~av~~~~~~Di~I~aAAVaDyr  348 (475)
T PRK13982        321 SARQMLAAVEAALPADIAIFAAAVADWR  348 (475)
T ss_pred             CHHHHHHHHHhhCCCCEEEEecccccee
Confidence            4444444443   379999999987643

>TIGR00518 alaDH alanine dehydrogenase

Probab=97.16  E-value=0.002  Score=55.59  Aligned_cols=76  Identities=12%  Similarity=-0.048  Sum_probs=54.6

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEE
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFH   83 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~   83 (248)
                      +..++++|+|+ |.+|..+++.+...|++|++++|+....  ..+...   ...  .+..+..+.+.+.+.+++.|+||+
T Consensus       165 l~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~--~~l~~~---~g~--~v~~~~~~~~~l~~~l~~aDvVI~  236 (370)
T TIGR00518       165 VEPGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRL--RQLDAE---FGG--RIHTRYSNAYEIEDAVKRADLLIG  236 (370)
T ss_pred             CCCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHH--HHHHHh---cCc--eeEeccCCHHHHHHHHccCCEEEE
Confidence            45678999977 7899999999999999999999875321  111111   111  123455667788888899999999


Q ss_pred             cccc
Q 025755           84 VACP   87 (248)
Q Consensus        84 ~ag~   87 (248)
                      +++.
T Consensus       237 a~~~  240 (370)
T TIGR00518       237 AVLI  240 (370)
T ss_pred             cccc
Confidence            8855

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=97.16  E-value=0.0015  Score=59.08  Aligned_cols=37  Identities=24%  Similarity=-0.023  Sum_probs=33.4

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCC
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPC   41 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~   41 (248)
                      +++|+++|+|+ ||+|++++..|++.|++|++++|+.+
T Consensus       377 ~~~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~e  413 (529)
T PLN02520        377 LAGKLFVVIGA-GGAGKALAYGAKEKGARVVIANRTYE  413 (529)
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence            56899999999 69999999999999999999988753

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=97.15  E-value=0.0021  Score=53.82  Aligned_cols=69  Identities=20%  Similarity=0.205  Sum_probs=50.0

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEE
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFH   83 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~   83 (248)
                      +.+++++|.|. |.+|+.++..|.+.|++|++++|+....  ...+.+     ...++     +.+++...+++.|+||+
T Consensus       150 l~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~--~~~~~~-----G~~~~-----~~~~l~~~l~~aDiVI~  216 (296)
T PRK08306        150 IHGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHL--ARITEM-----GLSPF-----HLSELAEEVGKIDIIFN  216 (296)
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHH--HHHHHc-----CCeee-----cHHHHHHHhCCCCEEEE
Confidence            46899999997 6799999999999999999999986321  111111     12221     23466777889999999


Q ss_pred             cc
Q 025755           84 VA   85 (248)
Q Consensus        84 ~a   85 (248)
                      ++
T Consensus       217 t~  218 (296)
T PRK08306        217 TI  218 (296)
T ss_pred             CC
Confidence            75

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=97.15  E-value=0.0044  Score=44.80  Aligned_cols=90  Identities=20%  Similarity=0.266  Sum_probs=53.9

Q ss_pred             cEEEEEcCccHHHHHHHHHHHH-CCCeEEEE-EcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEEc
Q 025755            7 ERVCVTGAGGYIASWLVKYLLL-KGYMVHGT-VRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFHV   84 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~-~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~~   84 (248)
                      ++|.|.|++|.+|+.+++.+.+ .++++... +|+.++...+....+....      ...+.-.++++.+++.+|++|.+
T Consensus         1 mrV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~------~~~~~v~~~l~~~~~~~DVvIDf   74 (124)
T PF01113_consen    1 MRVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIG------PLGVPVTDDLEELLEEADVVIDF   74 (124)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSS------T-SSBEBS-HHHHTTH-SEEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcC------CcccccchhHHHhcccCCEEEEc
Confidence            4899999999999999999999 67886654 4544211111111111100      11222225677888789999988


Q ss_pred             cccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCC
Q 025755           85 ACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKV  120 (248)
Q Consensus        85 ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~  120 (248)
                      ..+                  ......++.+.+.+.
T Consensus        75 T~p------------------~~~~~~~~~~~~~g~   92 (124)
T PF01113_consen   75 TNP------------------DAVYDNLEYALKHGV   92 (124)
T ss_dssp             S-H------------------HHHHHHHHHHHHHT-
T ss_pred             CCh------------------HHhHHHHHHHHhCCC
Confidence            722                  335567788888764

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=97.14  E-value=0.0024  Score=48.15  Aligned_cols=58  Identities=21%  Similarity=0.136  Sum_probs=43.5

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEE
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVF   82 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi   82 (248)
                      +++||+++|.|.+.-+|+-++..|.++|++|+++....                            .++++..++.|+||
T Consensus        33 ~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T----------------------------~~l~~~~~~ADIVV   84 (160)
T PF02882_consen   33 DLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKT----------------------------KNLQEITRRADIVV   84 (160)
T ss_dssp             STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTS----------------------------SSHHHHHTTSSEEE
T ss_pred             CCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCC----------------------------CcccceeeeccEEe
Confidence            37899999999999999999999999999999865432                            23556667889999


Q ss_pred             EccccC
Q 025755           83 HVACPV   88 (248)
Q Consensus        83 ~~ag~~   88 (248)
                      ..+|..
T Consensus        85 sa~G~~   90 (160)
T PF02882_consen   85 SAVGKP   90 (160)
T ss_dssp             E-SSST
T ss_pred             eeeccc
Confidence            888763

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=97.14  E-value=0.0015  Score=54.28  Aligned_cols=58  Identities=12%  Similarity=-0.014  Sum_probs=47.5

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEE
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVF   82 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi   82 (248)
                      ++.||+|.|.|.++-+|+-++..|+++|++|+++.+...                            ++....++.|+||
T Consensus       156 ~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~----------------------------~l~e~~~~ADIVI  207 (301)
T PRK14194        156 DLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRST----------------------------DAKALCRQADIVV  207 (301)
T ss_pred             CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCC----------------------------CHHHHHhcCCEEE
Confidence            378999999999999999999999999999999865531                            3555566788888


Q ss_pred             EccccC
Q 025755           83 HVACPV   88 (248)
Q Consensus        83 ~~ag~~   88 (248)
                      -+.|..
T Consensus       208 savg~~  213 (301)
T PRK14194        208 AAVGRP  213 (301)
T ss_pred             EecCCh
Confidence            887653

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=97.12  E-value=0.0071  Score=47.52  Aligned_cols=112  Identities=17%  Similarity=0.186  Sum_probs=66.9

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCC-eEEEEEcCCCchhh--------------------HHhhhhcCCCCCe--EE
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGY-MVHGTVRDPCDEKN--------------------AHLKKLEGASENL--QL   60 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~--------------------~~~~~~~~~~~~~--~~   60 (248)
                      +++.+|+|.|++| +|.++++.|+..|. ++++++.+.-+...                    ...+.+..-++.+  ..
T Consensus        17 L~~s~VlviG~gg-lGsevak~L~~~GVg~i~lvD~d~ve~snl~rq~~~~~~~~~iG~~Ka~~~~~~L~~lNp~v~i~~   95 (198)
T cd01485          17 LRSAKVLIIGAGA-LGAEIAKNLVLAGIDSITIVDHRLVSTEDLGSNFFLDAEVSNSGMNRAAASYEFLQELNPNVKLSI   95 (198)
T ss_pred             HhhCcEEEECCCH-HHHHHHHHHHHcCCCEEEEEECCcCChhcCcccEecccchhhcCchHHHHHHHHHHHHCCCCEEEE
Confidence            5678999998877 99999999999995 68888765321100                    0011122223444  33


Q ss_pred             EEccCCC-HHHHHHHhCCCCEEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccC
Q 025755           61 FKTDLLD-YEALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLN  135 (248)
Q Consensus        61 ~~~Di~d-~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~  135 (248)
                      +..++.+ .+....++++.|+||.+..                 +......+.+.|++.+. .+|+.++ .+.++.
T Consensus        96 ~~~~~~~~~~~~~~~~~~~dvVi~~~d-----------------~~~~~~~ln~~c~~~~i-p~i~~~~-~G~~G~  152 (198)
T cd01485          96 VEEDSLSNDSNIEEYLQKFTLVIATEE-----------------NYERTAKVNDVCRKHHI-PFISCAT-YGLIGY  152 (198)
T ss_pred             EecccccchhhHHHHHhCCCEEEECCC-----------------CHHHHHHHHHHHHHcCC-CEEEEEe-ecCEEE
Confidence            3344432 3455667778888885532                 12223446677888774 6777765 344443

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=97.12  E-value=0.011  Score=46.90  Aligned_cols=105  Identities=15%  Similarity=0.153  Sum_probs=63.6

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCC-eEEEEEcCCC---chh--------------hHHhhhhcCCCC--CeEEEEc
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGY-MVHGTVRDPC---DEK--------------NAHLKKLEGASE--NLQLFKT   63 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~-~V~~~~r~~~---~~~--------------~~~~~~~~~~~~--~~~~~~~   63 (248)
                      ++.++|+|.|+ |++|+.+++.|++.|. ++++++.+.-   +..              ....+.+...++  ++..+..
T Consensus        26 L~~~~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~lnp~v~v~~~~~  104 (212)
T PRK08644         26 LKKAKVGIAGA-GGLGSNIAVALARSGVGNLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEINPFVEIEAHNE  104 (212)
T ss_pred             HhCCCEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHHCCCCEEEEEee
Confidence            56789999985 7899999999999996 5888887631   110              011111222223  3344444


Q ss_pred             cCCCHHHHHHHhCCCCEEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhc-CCCEEEEEec
Q 025755           64 DLLDYEALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKA-KVKRVVVVSS  128 (248)
Q Consensus        64 Di~d~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~-~~~~iV~vSS  128 (248)
                      .+.+ +.+..++++.|+||.+.-                 |...-..+.+.+.+. + ..+|+.+.
T Consensus       105 ~i~~-~~~~~~~~~~DvVI~a~D-----------------~~~~r~~l~~~~~~~~~-~p~I~~~~  151 (212)
T PRK08644        105 KIDE-DNIEELFKDCDIVVEAFD-----------------NAETKAMLVETVLEHPG-KKLVAASG  151 (212)
T ss_pred             ecCH-HHHHHHHcCCCEEEECCC-----------------CHHHHHHHHHHHHHhCC-CCEEEeeh
Confidence            4443 456677888899887741                 122233456677766 4 46666654

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=97.11  E-value=0.0096  Score=51.61  Aligned_cols=105  Identities=18%  Similarity=0.128  Sum_probs=65.2

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCC-eEEEEEcCCC------------------chhhHHhhhhcCCCCCeE--EEE
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGY-MVHGTVRDPC------------------DEKNAHLKKLEGASENLQ--LFK   62 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~-~V~~~~r~~~------------------~~~~~~~~~~~~~~~~~~--~~~   62 (248)
                      ++.++|+|.|+ ||+|+.+++.|++.|. ++++++++.-                  ...+...+.+....+.+.  .+.
T Consensus       133 l~~~~VlvvG~-GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~  211 (376)
T PRK08762        133 LLEARVLLIGA-GGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAVQ  211 (376)
T ss_pred             HhcCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEEe
Confidence            56788999965 7899999999999996 7888887621                  111111222322234443  333


Q ss_pred             ccCCCHHHHHHHhCCCCEEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEec
Q 025755           63 TDLLDYEALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSS  128 (248)
Q Consensus        63 ~Di~d~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS  128 (248)
                      ..+. .+.+..++++.|+||++..-                 ...-..+.++|.+.+. .+|+.+.
T Consensus       212 ~~~~-~~~~~~~~~~~D~Vv~~~d~-----------------~~~r~~ln~~~~~~~i-p~i~~~~  258 (376)
T PRK08762        212 ERVT-SDNVEALLQDVDVVVDGADN-----------------FPTRYLLNDACVKLGK-PLVYGAV  258 (376)
T ss_pred             ccCC-hHHHHHHHhCCCEEEECCCC-----------------HHHHHHHHHHHHHcCC-CEEEEEe
Confidence            3343 35667778889999988631                 1112236677777764 6676654

>PRK04148 hypothetical protein; Provisional

Probab=97.08  E-value=0.0018  Score=47.18  Aligned_cols=95  Identities=16%  Similarity=0.134  Sum_probs=66.3

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEEc
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFHV   84 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~~   84 (248)
                      +++++++.|.+  -|.+++..|.+.|++|++++.+...  .+..+     ...+.++.+|+++++-  ++-+++|.|+.+
T Consensus        16 ~~~kileIG~G--fG~~vA~~L~~~G~~ViaIDi~~~a--V~~a~-----~~~~~~v~dDlf~p~~--~~y~~a~liysi   84 (134)
T PRK04148         16 KNKKIVELGIG--FYFKVAKKLKESGFDVIVIDINEKA--VEKAK-----KLGLNAFVDDLFNPNL--EIYKNAKLIYSI   84 (134)
T ss_pred             cCCEEEEEEec--CCHHHHHHHHHCCCEEEEEECCHHH--HHHHH-----HhCCeEEECcCCCCCH--HHHhcCCEEEEe
Confidence            56789999987  7888999999999999999998742  11111     1247899999998764  445677877643


Q ss_pred             cccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEe
Q 025755           85 ACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVS  127 (248)
Q Consensus        85 ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vS  127 (248)
                      =   ++       .+       -...+++.+++.+..-+|.-=
T Consensus        85 r---pp-------~e-------l~~~~~~la~~~~~~~~i~~l  110 (134)
T PRK04148         85 R---PP-------RD-------LQPFILELAKKINVPLIIKPL  110 (134)
T ss_pred             C---CC-------HH-------HHHHHHHHHHHcCCCEEEEcC
Confidence            2   22       12       134678888888876666543

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=97.07  E-value=0.019  Score=42.43  Aligned_cols=101  Identities=15%  Similarity=0.147  Sum_probs=60.8

Q ss_pred             EEEEEcCccHHHHHHHHHHHHCCC-eEEEEEcCCCch-----------------hhHH-hhhhcCCCCC--eEEEEccCC
Q 025755            8 RVCVTGAGGYIASWLVKYLLLKGY-MVHGTVRDPCDE-----------------KNAH-LKKLEGASEN--LQLFKTDLL   66 (248)
Q Consensus         8 ~vlVtG~~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~-----------------~~~~-~~~~~~~~~~--~~~~~~Di~   66 (248)
                      +|+|.|+ |++|+++++.|++.|. ++++++.+.-+.                 +.+. .+.+....+.  +..+..++.
T Consensus         1 ~VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i~~~~~~~~   79 (143)
T cd01483           1 RVLLVGL-GGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTAVPEGIS   79 (143)
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEEEEEeeecC
Confidence            4788887 8999999999999997 688887652111                 0011 1112222233  334444444


Q ss_pred             CHHHHHHHhCCCCEEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEec
Q 025755           67 DYEALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSS  128 (248)
Q Consensus        67 d~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS  128 (248)
                      +. .....+.+.|+||.+...                 ......+.++|++.+. .+|..++
T Consensus        80 ~~-~~~~~~~~~diVi~~~d~-----------------~~~~~~l~~~~~~~~i-~~i~~~~  122 (143)
T cd01483          80 ED-NLDDFLDGVDLVIDAIDN-----------------IAVRRALNRACKELGI-PVIDAGG  122 (143)
T ss_pred             hh-hHHHHhcCCCEEEECCCC-----------------HHHHHHHHHHHHHcCC-CEEEEcC
Confidence            32 335667788888877632                 2334567788888763 5666655

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=97.07  E-value=0.0039  Score=49.05  Aligned_cols=79  Identities=13%  Similarity=0.125  Sum_probs=52.3

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCC-eEEEEEcC---CCchhhH-------------H-hhhhcCCCC--CeEEEEc
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGY-MVHGTVRD---PCDEKNA-------------H-LKKLEGASE--NLQLFKT   63 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~-~V~~~~r~---~~~~~~~-------------~-~~~~~~~~~--~~~~~~~   63 (248)
                      |+.++|+|.|+ |++|+.+++.|++.|. ++++++++   .++...+             . .+.+..-.+  ++..+..
T Consensus        19 L~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~~iG~~Ka~~~~~~l~~inp~~~i~~~~~   97 (200)
T TIGR02354        19 LEQATVAICGL-GGLGSNVAINLARAGIGKLILVDFDVVEPSNLNRQQYKASQVGEPKTEALKENISEINPYTEIEAYDE   97 (200)
T ss_pred             HhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCEEcccccccccCChhhCCCHHHHHHHHHHHHHCCCCEEEEeee
Confidence            56789999998 6699999999999998 79999887   2221111             0 111111122  3444445


Q ss_pred             cCCCHHHHHHHhCCCCEEEEc
Q 025755           64 DLLDYEALCAATAGCTGVFHV   84 (248)
Q Consensus        64 Di~d~~~~~~~~~~id~vi~~   84 (248)
                      +++ .+.+..+++++|+||.+
T Consensus        98 ~i~-~~~~~~~~~~~DlVi~a  117 (200)
T TIGR02354        98 KIT-EENIDKFFKDADIVCEA  117 (200)
T ss_pred             eCC-HhHHHHHhcCCCEEEEC
Confidence            554 45677778889999876

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=97.05  E-value=0.0052  Score=43.59  Aligned_cols=69  Identities=26%  Similarity=0.267  Sum_probs=49.5

Q ss_pred             EEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHH-hCCCCEEEEcc
Q 025755            9 VCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAA-TAGCTGVFHVA   85 (248)
Q Consensus         9 vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~-~~~id~vi~~a   85 (248)
                      |+|.|. |.+|+.+++.|.+.+.+|+++++++..     .+.+..  ..+.++.+|.+|.+.++++ +++++.||-+.
T Consensus         1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~-----~~~~~~--~~~~~i~gd~~~~~~l~~a~i~~a~~vv~~~   70 (116)
T PF02254_consen    1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPER-----VEELRE--EGVEVIYGDATDPEVLERAGIEKADAVVILT   70 (116)
T ss_dssp             EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHH-----HHHHHH--TTSEEEES-TTSHHHHHHTTGGCESEEEEES
T ss_pred             eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHH-----HHHHHh--cccccccccchhhhHHhhcCccccCEEEEcc
Confidence            567777 579999999999977799999988632     111111  2378999999999999986 34677777554

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=97.05  E-value=0.0033  Score=52.22  Aligned_cols=78  Identities=15%  Similarity=-0.056  Sum_probs=50.5

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCC-eEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEE
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGY-MVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVF   82 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi   82 (248)
                      +++|+++|.|+ ||.|++++..|++.|. +|+++.|+.++. +...+.+.. ...+  ..  +...+++.....+.|+||
T Consensus       123 ~~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka-~~La~~~~~-~~~~--~~--~~~~~~~~~~~~~~DiVI  195 (282)
T TIGR01809       123 LAGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKL-SRLVDLGVQ-VGVI--TR--LEGDSGGLAIEKAAEVLV  195 (282)
T ss_pred             cCCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHH-HHHHHHhhh-cCcc--ee--ccchhhhhhcccCCCEEE
Confidence            56889999976 8899999999999996 799999986432 222222211 1111  11  111234445557899999


Q ss_pred             EccccC
Q 025755           83 HVACPV   88 (248)
Q Consensus        83 ~~ag~~   88 (248)
                      |+....
T Consensus       196 naTp~g  201 (282)
T TIGR01809       196 STVPAD  201 (282)
T ss_pred             ECCCCC
Confidence            997653

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=97.04  E-value=0.0096  Score=47.86  Aligned_cols=105  Identities=22%  Similarity=0.233  Sum_probs=65.0

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCC-eEEEEEcCCCch-----------------h-hHHhhhhcCCCCC--eEEEE
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGY-MVHGTVRDPCDE-----------------K-NAHLKKLEGASEN--LQLFK   62 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~-----------------~-~~~~~~~~~~~~~--~~~~~   62 (248)
                      +++++|+|.| .|++|+++++.|+..|. ++++++.+.-+.                 + +...+.+....+.  +..+.
T Consensus        19 L~~~~VlivG-~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~~   97 (228)
T cd00757          19 LKNARVLVVG-AGGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEAYN   97 (228)
T ss_pred             HhCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEEec
Confidence            5678999998 56799999999999996 677765433110                 0 1111222222333  44554


Q ss_pred             ccCCCHHHHHHHhCCCCEEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEec
Q 025755           63 TDLLDYEALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSS  128 (248)
Q Consensus        63 ~Di~d~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS  128 (248)
                      .++ +.+.+..+++++|+||.+...                 ...-..+.++|.+.+. .+|+.+.
T Consensus        98 ~~i-~~~~~~~~~~~~DvVi~~~d~-----------------~~~r~~l~~~~~~~~i-p~i~~g~  144 (228)
T cd00757          98 ERL-DAENAEELIAGYDLVLDCTDN-----------------FATRYLINDACVKLGK-PLVSGAV  144 (228)
T ss_pred             cee-CHHHHHHHHhCCCEEEEcCCC-----------------HHHHHHHHHHHHHcCC-CEEEEEe
Confidence            555 346677788889999987631                 1122346677777764 6666654

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases

Probab=97.01  E-value=0.0055  Score=51.62  Aligned_cols=113  Identities=21%  Similarity=0.147  Sum_probs=73.4

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCCC--eEEEEEcCCCchhh--HHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEE
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKGY--MVHGTVRDPCDEKN--AHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVF   82 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g~--~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi   82 (248)
                      +||.|+|+ |.+|..++-.|+..|.  ++++++.+.+...-  ..+...............  .|.+    .++++|+||
T Consensus         4 ~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~--~dy~----~~~~adivv   76 (312)
T cd05293           4 NKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEAD--KDYS----VTANSKVVI   76 (312)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEEC--CCHH----HhCCCCEEE
Confidence            58999996 9999999999998874  78888887642211  112221111111122221  2333    267899999


Q ss_pred             EccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCC-CEEEEEec
Q 025755           83 HVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKV-KRVVVVSS  128 (248)
Q Consensus        83 ~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~-~~iV~vSS  128 (248)
                      -+||......  ..-.+.++.|..-.+.+.+.+.+... +.+|.+|-
T Consensus        77 itaG~~~k~g--~~R~dll~~N~~i~~~~~~~i~~~~p~~~vivvsN  121 (312)
T cd05293          77 VTAGARQNEG--ESRLDLVQRNVDIFKGIIPKLVKYSPNAILLVVSN  121 (312)
T ss_pred             ECCCCCCCCC--CCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEccC
Confidence            9999755421  22256789999999999999988854 45666664

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=97.01  E-value=0.014  Score=49.21  Aligned_cols=98  Identities=21%  Similarity=0.154  Sum_probs=61.7

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHH---HHh--CCCC
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALC---AAT--AGCT   79 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~---~~~--~~id   79 (248)
                      .+++++|+|+++++|.++++.+...|++|++++++...  .......   ... .  ..|..+.+..+   +..  .++|
T Consensus       166 ~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~--~~~~~~~---~~~-~--~~~~~~~~~~~~~~~~~~~~~~d  237 (342)
T cd08266         166 PGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDK--LERAKEL---GAD-Y--VIDYRKEDFVREVRELTGKRGVD  237 (342)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHH--HHHHHHc---CCC-e--EEecCChHHHHHHHHHhCCCCCc
Confidence            56899999999999999999999999999988876532  1222211   111 1  13444433322   222  2589


Q ss_pred             EEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccc
Q 025755           80 GVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIG  130 (248)
Q Consensus        80 ~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~  130 (248)
                      ++++++|...                  ....++.+.+  .+++|.+++..
T Consensus       238 ~~i~~~g~~~------------------~~~~~~~l~~--~G~~v~~~~~~  268 (342)
T cd08266         238 VVVEHVGAAT------------------WEKSLKSLAR--GGRLVTCGATT  268 (342)
T ss_pred             EEEECCcHHH------------------HHHHHHHhhc--CCEEEEEecCC
Confidence            9999987310                  1223344443  36999998754

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=96.99  E-value=0.0043  Score=51.34  Aligned_cols=109  Identities=16%  Similarity=0.061  Sum_probs=64.1

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCC-CeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEE
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKG-YMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFH   83 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~   83 (248)
                      ++++++|.|++ |.+++++..|++.| .+++++.|+.+. .++..+.+......+.  ..+..+.+...    ..|+|||
T Consensus       125 ~~~~vlilGAG-GAarAv~~aL~~~g~~~i~V~NRt~~r-a~~La~~~~~~~~~~~--~~~~~~~~~~~----~~dliIN  196 (283)
T COG0169         125 TGKRVLILGAG-GAARAVAFALAEAGAKRITVVNRTRER-AEELADLFGELGAAVE--AAALADLEGLE----EADLLIN  196 (283)
T ss_pred             CCCEEEEECCc-HHHHHHHHHHHHcCCCEEEEEeCCHHH-HHHHHHHhhhcccccc--ccccccccccc----ccCEEEE
Confidence            46889999865 59999999999999 589999998753 2222222222211111  12222222222    5799999


Q ss_pred             ccccCCCCCC-C--------CccccchhhhHHH-HHHHHHHHHhcCCC
Q 025755           84 VACPVPVGKV-P--------NPEVQLIDPAVVG-TKNVLNSCVKAKVK  121 (248)
Q Consensus        84 ~ag~~~~~~~-~--------~~~~~~~~~n~~g-~~~~~~~~~~~~~~  121 (248)
                      +......... .        ....-.+++++.- ...+++.|++.|.+
T Consensus       197 aTp~Gm~~~~~~~~~~~~~l~~~~~v~D~vY~P~~TplL~~A~~~G~~  244 (283)
T COG0169         197 ATPVGMAGPEGDSPVPAELLPKGAIVYDVVYNPLETPLLREARAQGAK  244 (283)
T ss_pred             CCCCCCCCCCCCCCCcHHhcCcCCEEEEeccCCCCCHHHHHHHHcCCe
Confidence            9765433211 0        1112234555442 45789999988754

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.99  E-value=0.004  Score=45.99  Aligned_cols=58  Identities=19%  Similarity=0.081  Sum_probs=47.7

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEE
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVF   82 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi   82 (248)
                      +++||+|+|.|.+.-+|+-++..|.++|++|+.+.++..                            ++++..++.|+||
T Consensus        25 ~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~----------------------------~l~~~v~~ADIVv   76 (140)
T cd05212          25 RLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTI----------------------------QLQSKVHDADVVV   76 (140)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCc----------------------------CHHHHHhhCCEEE
Confidence            478999999999999999999999999999998865421                            3455667789998


Q ss_pred             EccccC
Q 025755           83 HVACPV   88 (248)
Q Consensus        83 ~~ag~~   88 (248)
                      -..|..
T Consensus        77 sAtg~~   82 (140)
T cd05212          77 VGSPKP   82 (140)
T ss_pred             EecCCC
Confidence            887754

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.98  E-value=0.0062  Score=50.59  Aligned_cols=101  Identities=19%  Similarity=0.213  Sum_probs=68.7

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCC-CHHHHHHHhCCCCEEEE
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLL-DYEALCAATAGCTGVFH   83 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~-d~~~~~~~~~~id~vi~   83 (248)
                      .|+++.|+|++| +|.--++....-|++|++++++..+ +++.++.+-.     +.+ .|.+ |++.++++.+..|.++|
T Consensus       181 pG~~vgI~GlGG-LGh~aVq~AKAMG~rV~vis~~~~k-keea~~~LGA-----d~f-v~~~~d~d~~~~~~~~~dg~~~  252 (360)
T KOG0023|consen  181 PGKWVGIVGLGG-LGHMAVQYAKAMGMRVTVISTSSKK-KEEAIKSLGA-----DVF-VDSTEDPDIMKAIMKTTDGGID  252 (360)
T ss_pred             CCcEEEEecCcc-cchHHHHHHHHhCcEEEEEeCCchh-HHHHHHhcCc-----cee-EEecCCHHHHHHHHHhhcCcce
Confidence            479999999999 9998888877789999999998632 3344443321     222 3445 78888888887888888


Q ss_pred             ccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccc
Q 025755           84 VACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIG  130 (248)
Q Consensus        84 ~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~  130 (248)
                      ++.....    .+           ...++++++..  +++|+++-..
T Consensus       253 ~v~~~a~----~~-----------~~~~~~~lk~~--Gt~V~vg~p~  282 (360)
T KOG0023|consen  253 TVSNLAE----HA-----------LEPLLGLLKVN--GTLVLVGLPE  282 (360)
T ss_pred             eeeeccc----cc-----------hHHHHHHhhcC--CEEEEEeCcC
Confidence            8753311    11           12355566654  5999998644

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=96.96  E-value=0.013  Score=49.56  Aligned_cols=73  Identities=23%  Similarity=0.223  Sum_probs=51.8

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEEc
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFHV   84 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~~   84 (248)
                      .+++|+|+|.+ |+|...++.+...|++|++++|+.++  .+..+++-   .+ .++  |-+|.+..+.+.+..|++|.+
T Consensus       166 pG~~V~I~G~G-GlGh~avQ~Aka~ga~Via~~~~~~K--~e~a~~lG---Ad-~~i--~~~~~~~~~~~~~~~d~ii~t  236 (339)
T COG1064         166 PGKWVAVVGAG-GLGHMAVQYAKAMGAEVIAITRSEEK--LELAKKLG---AD-HVI--NSSDSDALEAVKEIADAIIDT  236 (339)
T ss_pred             CCCEEEEECCc-HHHHHHHHHHHHcCCeEEEEeCChHH--HHHHHHhC---Cc-EEE--EcCCchhhHHhHhhCcEEEEC
Confidence            37899999999 99999999988899999999999752  22222221   11 222  222555566655568999999


Q ss_pred             cc
Q 025755           85 AC   86 (248)
Q Consensus        85 ag   86 (248)
                      ++
T Consensus       237 v~  238 (339)
T COG1064         237 VG  238 (339)
T ss_pred             CC
Confidence            87

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=96.96  E-value=0.015  Score=45.56  Aligned_cols=109  Identities=15%  Similarity=0.152  Sum_probs=64.4

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCC-eEEEEEcCCCchh------------------hHHhhhhcCCCCC--eEEEE
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGY-MVHGTVRDPCDEK------------------NAHLKKLEGASEN--LQLFK   62 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~------------------~~~~~~~~~~~~~--~~~~~   62 (248)
                      +++++|+|.|++| +|.++++.|+..|. ++++++.+.-+..                  +...+.+..-++.  ++.+.
T Consensus        19 L~~s~VlIiG~gg-lG~evak~La~~GVg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lNp~v~i~~~~   97 (197)
T cd01492          19 LRSARILLIGLKG-LGAEIAKNLVLSGIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALNPRVKVSVDT   97 (197)
T ss_pred             HHhCcEEEEcCCH-HHHHHHHHHHHcCCCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHCCCCEEEEEe
Confidence            5678999998655 99999999999996 6778776532110                  0111122222343  34444


Q ss_pred             ccCCCHHHHHHHhCCCCEEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceecc
Q 025755           63 TDLLDYEALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVML  134 (248)
Q Consensus        63 ~Di~d~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~  134 (248)
                      ..+.+  ....++++.|+||.+..                 |...-..+-+.|++.+. .+|+.++. +.++
T Consensus        98 ~~~~~--~~~~~~~~~dvVi~~~~-----------------~~~~~~~ln~~c~~~~i-p~i~~~~~-G~~G  148 (197)
T cd01492          98 DDISE--KPEEFFSQFDVVVATEL-----------------SRAELVKINELCRKLGV-KFYATGVH-GLFG  148 (197)
T ss_pred             cCccc--cHHHHHhCCCEEEECCC-----------------CHHHHHHHHHHHHHcCC-CEEEEEec-CCEE
Confidence            44442  24556778898886542                 11223446677888775 66666653 3444

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent

Probab=96.95  E-value=0.0097  Score=50.02  Aligned_cols=118  Identities=17%  Similarity=0.056  Sum_probs=72.0

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCCC-eEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEEcc
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKGY-MVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFHVA   85 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~~a   85 (248)
                      ++|.|.|+ |.+|..++..|+.+|+ +|++++..................  .......++-..+.+. +++.|+||-++
T Consensus         2 ~KV~VIGa-G~vG~~iA~~la~~g~~~VvlvDi~~~l~~g~a~d~~~~~~--~~~~~~~i~~t~d~~~-~~~aDiVIita   77 (305)
T TIGR01763         2 KKISVIGA-GFVGATTAFRLAEKELADLVLLDVVEGIPQGKALDMYEASP--VGGFDTKVTGTNNYAD-TANSDIVVITA   77 (305)
T ss_pred             CEEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCCChhHHHHHhhhhhhh--ccCCCcEEEecCCHHH-hCCCCEEEEcC
Confidence            57999997 9999999999999886 899999865422212111111100  0000111211112223 57899999999


Q ss_pred             ccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCC-CEEEEEeccc
Q 025755           86 CPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKV-KRVVVVSSIG  130 (248)
Q Consensus        86 g~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~-~~iV~vSS~~  130 (248)
                      |.....  ...-.+.+..|..-...+++.+.+... ..||.+|-..
T Consensus        78 g~p~~~--~~sR~~l~~~N~~iv~~i~~~I~~~~p~~~iIv~tNP~  121 (305)
T TIGR01763        78 GLPRKP--GMSREDLLSMNAGIVREVTGRIMEHSPNPIIVVVSNPL  121 (305)
T ss_pred             CCCCCc--CCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcH
Confidence            864432  112245778899999999998887743 4566666543

The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable.

>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated

Probab=96.95  E-value=0.0063  Score=52.02  Aligned_cols=99  Identities=17%  Similarity=0.119  Sum_probs=57.8

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHC-CCeEEEEEcCCCchhhHHhhhhcCCCCCeEEE-EccCCCHHHHHHHhCCCCEEEE
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLK-GYMVHGTVRDPCDEKNAHLKKLEGASENLQLF-KTDLLDYEALCAATAGCTGVFH   83 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-~~Di~d~~~~~~~~~~id~vi~   83 (248)
                      |++|.|.||||.+|+++++.|.++ +++++.+.++.+.. +...+..    +.+... ..++.+.+..  .+.++|+|+-
T Consensus         2 m~kVaIiGAtG~vG~~l~~~L~~~p~~elv~v~~~~~~g-~~l~~~~----~~~~~~~~~~~~~~~~~--~~~~vD~Vf~   74 (343)
T PRK00436          2 MIKVGIVGASGYTGGELLRLLLNHPEVEIVAVTSRSSAG-KPLSDVH----PHLRGLVDLVLEPLDPE--ILAGADVVFL   74 (343)
T ss_pred             CeEEEEECCCCHHHHHHHHHHHcCCCceEEEEECccccC-cchHHhC----cccccccCceeecCCHH--HhcCCCEEEE
Confidence            479999999999999999999986 57877766533211 1111111    111111 1122222222  3467999987


Q ss_pred             ccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccc
Q 025755           84 VACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIG  130 (248)
Q Consensus        84 ~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~  130 (248)
                      |...                  .....++..+.+.| .++|-.|+..
T Consensus        75 alP~------------------~~~~~~v~~a~~aG-~~VID~S~~f  102 (343)
T PRK00436         75 ALPH------------------GVSMDLAPQLLEAG-VKVIDLSADF  102 (343)
T ss_pred             CCCc------------------HHHHHHHHHHHhCC-CEEEECCccc
Confidence            6632                  11345666666655 4788888744

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=96.94  E-value=0.0062  Score=50.59  Aligned_cols=80  Identities=16%  Similarity=0.138  Sum_probs=49.7

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCC-eEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEE
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGY-MVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVF   82 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi   82 (248)
                      .++|+++|.|+ ||.|++++-.|++.|+ ++++++|+.++. +...+.+....+.......+   ..++.....++|+||
T Consensus       125 ~~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka-~~La~~~~~~~~~~~~~~~~---~~~~~~~~~~~divI  199 (283)
T PRK14027        125 AKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRA-QALADVINNAVGREAVVGVD---ARGIEDVIAAADGVV  199 (283)
T ss_pred             cCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHH-HHHHHHHhhccCcceEEecC---HhHHHHHHhhcCEEE
Confidence            46789999998 7899999999999996 788999986432 22222222111111111222   222333445789999


Q ss_pred             EccccC
Q 025755           83 HVACPV   88 (248)
Q Consensus        83 ~~ag~~   88 (248)
                      |+..+.
T Consensus       200 NaTp~G  205 (283)
T PRK14027        200 NATPMG  205 (283)
T ss_pred             EcCCCC
Confidence            987543

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.94  E-value=0.019  Score=49.32  Aligned_cols=105  Identities=14%  Similarity=0.060  Sum_probs=64.8

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCC-eEEEEEcCCCch-----------------h-hHHhhhhcCCCCCe--EEEE
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGY-MVHGTVRDPCDE-----------------K-NAHLKKLEGASENL--QLFK   62 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~-----------------~-~~~~~~~~~~~~~~--~~~~   62 (248)
                      +++++|+|.|+ ||+|+.+++.|+..|. ++++++.+.-+.                 + ....+.+...++.+  ..+.
T Consensus        26 L~~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~v~~~~  104 (355)
T PRK05597         26 LFDAKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPDVKVTVSV  104 (355)
T ss_pred             HhCCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCCcEEEEEE
Confidence            56789999988 7899999999999995 777877654111                 0 11111222333444  4444


Q ss_pred             ccCCCHHHHHHHhCCCCEEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEec
Q 025755           63 TDLLDYEALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSS  128 (248)
Q Consensus        63 ~Di~d~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS  128 (248)
                      ..++ .+....++++.|+||.+.-                 |+..-..+.++|.+.+. .+|+-++
T Consensus       105 ~~i~-~~~~~~~~~~~DvVvd~~d-----------------~~~~r~~~n~~c~~~~i-p~v~~~~  151 (355)
T PRK05597        105 RRLT-WSNALDELRDADVILDGSD-----------------NFDTRHLASWAAARLGI-PHVWASI  151 (355)
T ss_pred             eecC-HHHHHHHHhCCCEEEECCC-----------------CHHHHHHHHHHHHHcCC-CEEEEEE
Confidence            5554 3456677889999998762                 11222335566777664 5666544

>PLN02602 lactate dehydrogenase

Probab=96.93  E-value=0.034  Score=47.64  Aligned_cols=113  Identities=16%  Similarity=0.224  Sum_probs=72.9

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCCC--eEEEEEcCCCchhhH--HhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEE
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKGY--MVHGTVRDPCDEKNA--HLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVF   82 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g~--~V~~~~r~~~~~~~~--~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi   82 (248)
                      +||.|+|+ |.+|+.++-.|+..+.  ++++++.+.....-.  .+...........+...  .|.+    .++++|+||
T Consensus        38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~~i~~~--~dy~----~~~daDiVV  110 (350)
T PLN02602         38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRTKILAS--TDYA----VTAGSDLCI  110 (350)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCCEEEeC--CCHH----HhCCCCEEE
Confidence            69999996 9999999999998874  788899876422211  11211111112222211  1222    367899999


Q ss_pred             EccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCC-CEEEEEec
Q 025755           83 HVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKV-KRVVVVSS  128 (248)
Q Consensus        83 ~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~-~~iV~vSS  128 (248)
                      -+||......  ..-.+.+..|..-.+.+.+.+.+... ..+|.+|-
T Consensus       111 itAG~~~k~g--~tR~dll~~N~~I~~~i~~~I~~~~p~~ivivvtN  155 (350)
T PLN02602        111 VTAGARQIPG--ESRLNLLQRNVALFRKIIPELAKYSPDTILLIVSN  155 (350)
T ss_pred             ECCCCCCCcC--CCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence            9999754321  22257788899989999999988754 45666653

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=96.93  E-value=0.0063  Score=48.57  Aligned_cols=35  Identities=23%  Similarity=0.132  Sum_probs=32.1

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCC
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPC   41 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~   41 (248)
                      |+|.|+||+|.+|+.++..|++.|++|++.+|+.+
T Consensus         1 MkI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~   35 (219)
T TIGR01915         1 MKIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLE   35 (219)
T ss_pred             CEEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHH
Confidence            37999999999999999999999999999988764

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase

Probab=96.92  E-value=0.0055  Score=47.50  Aligned_cols=79  Identities=10%  Similarity=-0.021  Sum_probs=53.4

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCC-HHHHHHHhCCCCEE
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLD-YEALCAATAGCTGV   81 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d-~~~~~~~~~~id~v   81 (248)
                      +++||+++|.|-+.-+|+=++..|+++|++|++++.+.-..       +.. .....--.....| +..+...+++.|+|
T Consensus        59 ~l~GK~vvVIGrS~iVGkPla~lL~~~~AtVti~~~~~~~~-------~~~-~~~~~hs~t~~~~~~~~l~~~~~~ADIV  130 (197)
T cd01079          59 RLYGKTITIINRSEVVGRPLAALLANDGARVYSVDINGIQV-------FTR-GESIRHEKHHVTDEEAMTLDCLSQSDVV  130 (197)
T ss_pred             CCCCCEEEEECCCccchHHHHHHHHHCCCEEEEEecCcccc-------ccc-ccccccccccccchhhHHHHHhhhCCEE
Confidence            48899999999999999999999999999999886543110       000 0000001111122 23477778899999


Q ss_pred             EEccccCC
Q 025755           82 FHVACPVP   89 (248)
Q Consensus        82 i~~ag~~~   89 (248)
                      |-..|...
T Consensus       131 IsAvG~~~  138 (197)
T cd01079         131 ITGVPSPN  138 (197)
T ss_pred             EEccCCCC
Confidence            99888644

The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional

>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form

Probab=96.90  E-value=0.0069  Score=51.85  Aligned_cols=99  Identities=16%  Similarity=0.079  Sum_probs=57.0

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHC-CCeEEEE-EcCCCchhhHHhhhhcCCCCCeEEE-EccCCCHHHHHHHhCCCCEEEE
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLK-GYMVHGT-VRDPCDEKNAHLKKLEGASENLQLF-KTDLLDYEALCAATAGCTGVFH   83 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~-g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~-~~Di~d~~~~~~~~~~id~vi~   83 (248)
                      ++|.|.||||.+|..+++.|.++ +.+++.+ +++....+ ......    +.+... ..++.+ .+...+.+++|+|+-
T Consensus         1 ~kVaIiGATG~vG~ellr~L~~hP~~el~~l~~s~~sagk-~~~~~~----~~l~~~~~~~~~~-~~~~~~~~~~DvVf~   74 (346)
T TIGR01850         1 IKVAIVGASGYTGGELLRLLLNHPEVEITYLVSSRESAGK-PVSEVH----PHLRGLVDLNLEP-IDEEEIAEDADVVFL   74 (346)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCceEEEEeccchhcCC-ChHHhC----ccccccCCceeec-CCHHHhhcCCCEEEE
Confidence            47999999999999999999987 5677744 43321111 111111    111111 111211 122333357999987


Q ss_pred             ccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccc
Q 025755           84 VACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIG  130 (248)
Q Consensus        84 ~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~  130 (248)
                      |....                  ....+++.+.+.| .++|-.|+..
T Consensus        75 alP~~------------------~s~~~~~~~~~~G-~~VIDlS~~f  102 (346)
T TIGR01850        75 ALPHG------------------VSAELAPELLAAG-VKVIDLSADF  102 (346)
T ss_pred             CCCch------------------HHHHHHHHHHhCC-CEEEeCChhh
Confidence            77321                  2456777776666 5888888754

This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.

>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]

Probab=96.88  E-value=0.0036  Score=49.01  Aligned_cols=36  Identities=19%  Similarity=-0.036  Sum_probs=30.2

Q ss_pred             EEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCch
Q 025755            8 RVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDE   43 (248)
Q Consensus         8 ~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~   43 (248)
                      ++...||+|-||+.+++.|.+.||+|++..|+.++.
T Consensus         2 ~~~~i~GtGniG~alA~~~a~ag~eV~igs~r~~~~   37 (211)
T COG2085           2 MIIAIIGTGNIGSALALRLAKAGHEVIIGSSRGPKA   37 (211)
T ss_pred             cEEEEeccChHHHHHHHHHHhCCCeEEEecCCChhH
Confidence            455667889999999999999999999997776543

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=96.88  E-value=0.0077  Score=48.95  Aligned_cols=105  Identities=21%  Similarity=0.203  Sum_probs=64.8

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCC-eEEEEEcCCCchhh-----------------H-HhhhhcCCCCC--eEEEE
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGY-MVHGTVRDPCDEKN-----------------A-HLKKLEGASEN--LQLFK   62 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~-----------------~-~~~~~~~~~~~--~~~~~   62 (248)
                      +++++|+|.|+ |++|+.+++.|+..|. ++++++.+.-+...                 + ..+.+....+.  +..+.
T Consensus        30 L~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp~v~i~~~~  108 (245)
T PRK05690         30 LKAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARINPHIAIETIN  108 (245)
T ss_pred             hcCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHCCCCEEEEEe
Confidence            56789999998 8999999999999995 77777664421110                 0 01122222333  34444


Q ss_pred             ccCCCHHHHHHHhCCCCEEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEec
Q 025755           63 TDLLDYEALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSS  128 (248)
Q Consensus        63 ~Di~d~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS  128 (248)
                      ..+. .+.+..++++.|+||.+.-                 |...-..+.+++.+.+. .+|+.++
T Consensus       109 ~~i~-~~~~~~~~~~~DiVi~~~D-----------------~~~~r~~ln~~~~~~~i-p~v~~~~  155 (245)
T PRK05690        109 ARLD-DDELAALIAGHDLVLDCTD-----------------NVATRNQLNRACFAAKK-PLVSGAA  155 (245)
T ss_pred             ccCC-HHHHHHHHhcCCEEEecCC-----------------CHHHHHHHHHHHHHhCC-EEEEeee
Confidence            4443 4556777888999997762                 11222346677777763 5666443

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=96.88  E-value=0.0056  Score=51.56  Aligned_cols=74  Identities=24%  Similarity=0.212  Sum_probs=48.5

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCC-CHHHHHHHhCCCCEEEE
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLL-DYEALCAATAGCTGVFH   83 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~-d~~~~~~~~~~id~vi~   83 (248)
                      .+.+++|+|++|.+|.++++.+...|.+|+++.++...  ...+..+   .. -..+  |.. -.+.+.+. .++|++++
T Consensus       162 ~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~--~~~~~~~---~~-~~~~--~~~~~~~~~~~~-~~~d~v~~  232 (332)
T cd08259         162 KGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEK--LKILKEL---GA-DYVI--DGSKFSEDVKKL-GGADVVIE  232 (332)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHH--HHHHHHc---CC-cEEE--ecHHHHHHHHhc-cCCCEEEE
Confidence            46799999999999999999999999999998876532  2222221   11 1122  221 12233333 27899999


Q ss_pred             cccc
Q 025755           84 VACP   87 (248)
Q Consensus        84 ~ag~   87 (248)
                      ++|.
T Consensus       233 ~~g~  236 (332)
T cd08259         233 LVGS  236 (332)
T ss_pred             CCCh
Confidence            9863

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=96.82  E-value=0.002  Score=49.71  Aligned_cols=69  Identities=22%  Similarity=0.121  Sum_probs=46.0

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEE
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVF   82 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi   82 (248)
                      .+.+++|.|.|- |.||+++++.|..-|++|++++|+.....  ....     ..+        ...+++.++++.|+|+
T Consensus        33 ~l~g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~~~~~~--~~~~-----~~~--------~~~~l~ell~~aDiv~   96 (178)
T PF02826_consen   33 ELRGKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRSPKPEE--GADE-----FGV--------EYVSLDELLAQADIVS   96 (178)
T ss_dssp             -STTSEEEEEST-SHHHHHHHHHHHHTT-EEEEEESSCHHHH--HHHH-----TTE--------EESSHHHHHHH-SEEE
T ss_pred             ccCCCEEEEEEE-cCCcCeEeeeeecCCceeEEecccCChhh--hccc-----ccc--------eeeehhhhcchhhhhh
Confidence            378999999976 78999999999999999999999874221  0010     011        1124556677789988


Q ss_pred             Ecccc
Q 025755           83 HVACP   87 (248)
Q Consensus        83 ~~ag~   87 (248)
                      .+.-.
T Consensus        97 ~~~pl  101 (178)
T PF02826_consen   97 LHLPL  101 (178)
T ss_dssp             E-SSS
T ss_pred             hhhcc
Confidence            77654

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.82  E-value=0.0047  Score=51.00  Aligned_cols=57  Identities=18%  Similarity=0.054  Sum_probs=47.5

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEE
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFH   83 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~   83 (248)
                      +.||+++|+|.+..+|+-++..|+++|++|+++.+..                            .++....++.|+||.
T Consensus       157 l~Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs~T----------------------------~~l~~~~~~ADIvi~  208 (285)
T PRK10792        157 TYGLNAVVVGASNIVGRPMSLELLLAGCTVTVCHRFT----------------------------KNLRHHVRNADLLVV  208 (285)
T ss_pred             CCCCEEEEECCCcccHHHHHHHHHHCCCeEEEEECCC----------------------------CCHHHHHhhCCEEEE
Confidence            7899999999999999999999999999999876432                            135666677899998


Q ss_pred             ccccC
Q 025755           84 VACPV   88 (248)
Q Consensus        84 ~ag~~   88 (248)
                      ..|..
T Consensus       209 avG~p  213 (285)
T PRK10792        209 AVGKP  213 (285)
T ss_pred             cCCCc
Confidence            88753

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=96.82  E-value=0.0049  Score=54.16  Aligned_cols=72  Identities=21%  Similarity=0.156  Sum_probs=51.0

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCC-CeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEE
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKG-YMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVF   82 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi   82 (248)
                      +.+++++|.|+ |.+|..+++.|...| .+|++++|+.... ....+.+.   .  ..+     +.+++...+.+.|+||
T Consensus       178 l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra-~~la~~~g---~--~~i-----~~~~l~~~l~~aDvVi  245 (417)
T TIGR01035       178 LKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERA-EDLAKELG---G--EAV-----KFEDLEEYLAEADIVI  245 (417)
T ss_pred             ccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHH-HHHHHHcC---C--eEe-----eHHHHHHHHhhCCEEE
Confidence            67899999997 999999999999999 7899999986421 11222111   1  111     2346667778899999


Q ss_pred             Ecccc
Q 025755           83 HVACP   87 (248)
Q Consensus        83 ~~ag~   87 (248)
                      .+.+.
T Consensus       246 ~aT~s  250 (417)
T TIGR01035       246 SSTGA  250 (417)
T ss_pred             ECCCC
Confidence            98653

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=96.81  E-value=0.0084  Score=46.08  Aligned_cols=76  Identities=17%  Similarity=0.129  Sum_probs=47.9

Q ss_pred             EEEEEcCccHHHHHHHHHHHHCCC-eEEEEEcCCC---chh-------------h-HHhhhhcCCCCC--eEEEEccCCC
Q 025755            8 RVCVTGAGGYIASWLVKYLLLKGY-MVHGTVRDPC---DEK-------------N-AHLKKLEGASEN--LQLFKTDLLD   67 (248)
Q Consensus         8 ~vlVtG~~g~iG~~~~~~l~~~g~-~V~~~~r~~~---~~~-------------~-~~~~~~~~~~~~--~~~~~~Di~d   67 (248)
                      +|+|.|+ |++|+.+++.|++.|. ++++.+.+.-   +..             . ...+.+....+.  +..+...+. 
T Consensus         1 ~VlViG~-GglGs~ia~~La~~Gvg~i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~lnp~v~i~~~~~~~~-   78 (174)
T cd01487           1 KVGIAGA-GGLGSNIAVLLARSGVGNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREINPFVKIEAINIKID-   78 (174)
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHHHHCCCCEEEEEEeecC-
Confidence            4788885 7899999999999997 5999888751   111             0 111112222233  334444443 


Q ss_pred             HHHHHHHhCCCCEEEEcc
Q 025755           68 YEALCAATAGCTGVFHVA   85 (248)
Q Consensus        68 ~~~~~~~~~~id~vi~~a   85 (248)
                      .+.+.+++++.|+||.+.
T Consensus        79 ~~~~~~~l~~~DlVi~~~   96 (174)
T cd01487          79 ENNLEGLFGDCDIVVEAF   96 (174)
T ss_pred             hhhHHHHhcCCCEEEECC
Confidence            355677788899998774

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>cd00300 LDH_like L-lactate dehydrogenase-like enzymes

Probab=96.80  E-value=0.016  Score=48.59  Aligned_cols=111  Identities=18%  Similarity=0.125  Sum_probs=71.1

Q ss_pred             EEEEcCccHHHHHHHHHHHHCC--CeEEEEEcCCCchhh--HHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEEc
Q 025755            9 VCVTGAGGYIASWLVKYLLLKG--YMVHGTVRDPCDEKN--AHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFHV   84 (248)
Q Consensus         9 vlVtG~~g~iG~~~~~~l~~~g--~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~~   84 (248)
                      |.|.|+ |.+|..++-.|+..|  .++++++++.+....  ..+...........+..+  .|    ...++++|+||.+
T Consensus         1 i~iiGa-G~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~~--~~----~~~l~~aDiVIit   73 (300)
T cd00300           1 ITIIGA-GNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVRG--GD----YADAADADIVVIT   73 (300)
T ss_pred             CEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEEC--CC----HHHhCCCCEEEEc
Confidence            457786 679999999999988  689999987643221  112222111112222221  22    2357789999999


Q ss_pred             cccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCC-CEEEEEec
Q 025755           85 ACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKV-KRVVVVSS  128 (248)
Q Consensus        85 ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~-~~iV~vSS  128 (248)
                      +|......  ..-.+.+..|+.-.+.+.+.+.+... +.+|.+|-
T Consensus        74 ag~p~~~~--~~R~~l~~~n~~i~~~~~~~i~~~~p~~~viv~sN  116 (300)
T cd00300          74 AGAPRKPG--ETRLDLINRNAPILRSVITNLKKYGPDAIILVVSN  116 (300)
T ss_pred             CCCCCCCC--CCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccC
Confidence            99754322  22256778899999999999988754 45666654

Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot

>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.79  E-value=0.0047  Score=51.41  Aligned_cols=35  Identities=14%  Similarity=0.080  Sum_probs=32.8

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEE
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTV   37 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~   37 (248)
                      +++||+|+|.|.++.+|+.++..|+++|++|+++.
T Consensus       155 ~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~  189 (296)
T PRK14188        155 DLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAH  189 (296)
T ss_pred             CCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEEC
Confidence            37899999999999999999999999999999984

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=96.78  E-value=0.0073  Score=53.19  Aligned_cols=72  Identities=19%  Similarity=0.169  Sum_probs=50.9

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCC-eEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEE
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGY-MVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVF   82 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi   82 (248)
                      +.+++++|.|+ |.+|..+++.|...|. +|++++|+.... ......+.          .+..+.+++...+.+.|+||
T Consensus       180 ~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra-~~la~~~g----------~~~~~~~~~~~~l~~aDvVI  247 (423)
T PRK00045        180 LSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERA-EELAEEFG----------GEAIPLDELPEALAEADIVI  247 (423)
T ss_pred             ccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHH-HHHHHHcC----------CcEeeHHHHHHHhccCCEEE
Confidence            67899999987 9999999999999997 788998876321 11222211          12223355667778899999


Q ss_pred             Ecccc
Q 025755           83 HVACP   87 (248)
Q Consensus        83 ~~ag~   87 (248)
                      .+.+.
T Consensus       248 ~aT~s  252 (423)
T PRK00045        248 SSTGA  252 (423)
T ss_pred             ECCCC
Confidence            98764

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

Probab=96.73  E-value=0.0047  Score=55.16  Aligned_cols=37  Identities=22%  Similarity=0.169  Sum_probs=33.0

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCC
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPC   41 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~   41 (248)
                      +.+|+++|+|+ |++|++++..|.+.|++|++.+|+..
T Consensus       330 ~~~k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~~~  366 (477)
T PRK09310        330 LNNQHVAIVGA-GGAAKAIATTLARAGAELLIFNRTKA  366 (477)
T ss_pred             cCCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence            56789999996 79999999999999999999988753

>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.73  E-value=0.0075  Score=49.78  Aligned_cols=58  Identities=17%  Similarity=0.019  Sum_probs=46.6

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEE
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVF   82 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi   82 (248)
                      ++.||+|+|.|.+..+|+-++..|+++|++|+++....                            .++....++.|+||
T Consensus       154 ~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~t----------------------------~~l~~~~~~ADIvV  205 (285)
T PRK14191        154 EIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHILT----------------------------KDLSFYTQNADIVC  205 (285)
T ss_pred             CCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeCCc----------------------------HHHHHHHHhCCEEE
Confidence            37899999999999999999999999999999863211                            23456677889999


Q ss_pred             EccccC
Q 025755           83 HVACPV   88 (248)
Q Consensus        83 ~~ag~~   88 (248)
                      -+.|..
T Consensus       206 ~AvG~p  211 (285)
T PRK14191        206 VGVGKP  211 (285)
T ss_pred             EecCCC
Confidence            888653

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=96.72  E-value=0.011  Score=46.64  Aligned_cols=72  Identities=18%  Similarity=0.166  Sum_probs=50.6

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEE
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVF   82 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi   82 (248)
                      ++++|+|+|.||+ .+|..-++.|++.|++|++++.+..+.    +..+.. .+++.++..+... ++    +++.|.||
T Consensus         6 ~l~gk~vlVvGgG-~va~rk~~~Ll~~ga~VtVvsp~~~~~----l~~l~~-~~~i~~~~~~~~~-~d----l~~~~lVi   74 (205)
T TIGR01470         6 NLEGRAVLVVGGG-DVALRKARLLLKAGAQLRVIAEELESE----LTLLAE-QGGITWLARCFDA-DI----LEGAFLVI   74 (205)
T ss_pred             EcCCCeEEEECcC-HHHHHHHHHHHHCCCEEEEEcCCCCHH----HHHHHH-cCCEEEEeCCCCH-HH----hCCcEEEE
Confidence            4789999999864 599999999999999999998655321    122222 2478888887763 22    45677777


Q ss_pred             Ecc
Q 025755           83 HVA   85 (248)
Q Consensus        83 ~~a   85 (248)
                      -+.
T Consensus        75 ~at   77 (205)
T TIGR01470        75 AAT   77 (205)
T ss_pred             ECC
Confidence            443

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>PRK06019 phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed

Probab=96.72  E-value=0.01  Score=51.42  Aligned_cols=67  Identities=19%  Similarity=0.220  Sum_probs=51.7

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEE
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVF   82 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi   82 (248)
                      |++|+|.|+ |.+|+.++..+.+.|++|++++.+........        .+ ..+..|..|.+.+.++++.+|+|.
T Consensus         2 ~~~igilG~-Gql~~ml~~aa~~lG~~v~~~d~~~~~pa~~~--------ad-~~~~~~~~D~~~l~~~a~~~dvit   68 (372)
T PRK06019          2 MKTIGIIGG-GQLGRMLALAAAPLGYKVIVLDPDPDSPAAQV--------AD-EVIVADYDDVAALRELAEQCDVIT   68 (372)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCCCCchhHh--------Cc-eEEecCCCCHHHHHHHHhcCCEEE
Confidence            478999999 58999999999999999999987654221111        11 345578899999999999888764

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=96.72  E-value=0.013  Score=48.12  Aligned_cols=106  Identities=16%  Similarity=0.256  Sum_probs=62.9

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCC-CeEEEEEcCCCchhh------------------HHhhhhcCCCCCeEEEEc-
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKG-YMVHGTVRDPCDEKN------------------AHLKKLEGASENLQLFKT-   63 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g-~~V~~~~r~~~~~~~------------------~~~~~~~~~~~~~~~~~~-   63 (248)
                      |++.+|+|.|+ |++|+++++.|++.| .++++++.+.-....                  ...+.+..-++.+..... 
T Consensus        28 L~~s~VlVvG~-GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~~i~  106 (268)
T PRK15116         28 FADAHICVVGI-GGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVVD  106 (268)
T ss_pred             hcCCCEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEEEEe
Confidence            67789999976 569999999999999 688888765321100                  001112222344333322 


Q ss_pred             cCCCHHHHHHHhC-CCCEEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEec
Q 025755           64 DLLDYEALCAATA-GCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSS  128 (248)
Q Consensus        64 Di~d~~~~~~~~~-~id~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS  128 (248)
                      +..+++.+..++. +.|+||.+...                 +..-..+.++|++.+. .+|.++.
T Consensus       107 ~~i~~e~~~~ll~~~~D~VIdaiD~-----------------~~~k~~L~~~c~~~~i-p~I~~gG  154 (268)
T PRK15116        107 DFITPDNVAEYMSAGFSYVIDAIDS-----------------VRPKAALIAYCRRNKI-PLVTTGG  154 (268)
T ss_pred             cccChhhHHHHhcCCCCEEEEcCCC-----------------HHHHHHHHHHHHHcCC-CEEEECC
Confidence            2224455555553 68888876532                 2223457888888764 5665544

>PRK00048 dihydrodipicolinate reductase; Provisional

Probab=96.71  E-value=0.0056  Score=50.15  Aligned_cols=66  Identities=17%  Similarity=0.110  Sum_probs=44.0

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHC-CCeEEEEE-cCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEEc
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLK-GYMVHGTV-RDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFHV   84 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~-g~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~~   84 (248)
                      ++|.|+|++|.+|+.+++.+.+. +.+++... ++..... ..             ...++...+++..+++++|+||++
T Consensus         2 mkV~IiG~~G~mG~~i~~~l~~~~~~elvav~d~~~~~~~-~~-------------~~~~i~~~~dl~~ll~~~DvVid~   67 (257)
T PRK00048          2 IKVAVAGASGRMGRELIEAVEAAEDLELVAAVDRPGSPLV-GQ-------------GALGVAITDDLEAVLADADVLIDF   67 (257)
T ss_pred             cEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCcccc-cc-------------CCCCccccCCHHHhccCCCEEEEC
Confidence            58999999999999999988864 67877644 4432111 00             112333344566666688999988


Q ss_pred             cc
Q 025755           85 AC   86 (248)
Q Consensus        85 ag   86 (248)
                      +.
T Consensus        68 t~   69 (257)
T PRK00048         68 TT   69 (257)
T ss_pred             CC
Confidence            84

>PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=96.70  E-value=0.014  Score=50.03  Aligned_cols=35  Identities=23%  Similarity=0.310  Sum_probs=29.5

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCC-eEEEEEcCC
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGY-MVHGTVRDP   40 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~-~V~~~~r~~   40 (248)
                      +++|.|+||+|.+|+++++.|+++.. +++.+.++.
T Consensus         3 ~~~V~I~GatG~iG~~l~~~L~~~p~~el~~~~~s~   38 (349)
T PRK08664          3 KLKVGILGATGMVGQRFVQLLANHPWFEVTALAASE   38 (349)
T ss_pred             CcEEEEECCCCHHHHHHHHHHHcCCCceEEEEEcCh
Confidence            47999999999999999999998754 888775554

>PRK08655 prephenate dehydrogenase; Provisional

Probab=96.70  E-value=0.0053  Score=54.23  Aligned_cols=35  Identities=31%  Similarity=0.627  Sum_probs=32.2

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCC
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPC   41 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~   41 (248)
                      |+|.|+||+|.+|..+++.|.+.|++|++++|+..
T Consensus         1 MkI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~   35 (437)
T PRK08655          1 MKISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPK   35 (437)
T ss_pred             CEEEEEecCCHHHHHHHHHHHHCCCEEEEEECChH
Confidence            47999999999999999999999999999998764

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=96.69  E-value=0.0097  Score=50.52  Aligned_cols=101  Identities=21%  Similarity=0.198  Sum_probs=60.3

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC--CCCEEEE
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA--GCTGVFH   83 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~--~id~vi~   83 (248)
                      +++|||+||+|++|...++.+...|+.++++..+..+  .+.++.+-.. .-+.+..-|+  .+.++++..  ++|+|+.
T Consensus       143 g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k--~~~~~~lGAd-~vi~y~~~~~--~~~v~~~t~g~gvDvv~D  217 (326)
T COG0604         143 GETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEK--LELLKELGAD-HVINYREEDF--VEQVRELTGGKGVDVVLD  217 (326)
T ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHH--HHHHHhcCCC-EEEcCCcccH--HHHHHHHcCCCCceEEEE
Confidence            7899999999999999999999999776666655422  2233322110 0112222221  334555554  5899998


Q ss_pred             ccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccce
Q 025755           84 VACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGA  131 (248)
Q Consensus        84 ~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~  131 (248)
                      .-|...                  ....++.+.+ + ++++.++...+
T Consensus       218 ~vG~~~------------------~~~~l~~l~~-~-G~lv~ig~~~g  245 (326)
T COG0604         218 TVGGDT------------------FAASLAALAP-G-GRLVSIGALSG  245 (326)
T ss_pred             CCCHHH------------------HHHHHHHhcc-C-CEEEEEecCCC
Confidence            776321                  1123333343 3 69999887653

>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.69  E-value=0.006  Score=50.41  Aligned_cols=56  Identities=18%  Similarity=0.093  Sum_probs=46.1

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEE
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFH   83 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~   83 (248)
                      ++||+++|.|.+..+|+-++..|+++|++|+++....                            .++...++..|+||.
T Consensus       156 l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~t----------------------------~~l~~~~~~ADIVV~  207 (285)
T PRK14189        156 LRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSKT----------------------------RDLAAHTRQADIVVA  207 (285)
T ss_pred             CCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCCC----------------------------CCHHHHhhhCCEEEE
Confidence            7899999999999999999999999999999864221                            135566778899998


Q ss_pred             cccc
Q 025755           84 VACP   87 (248)
Q Consensus        84 ~ag~   87 (248)
                      .+|.
T Consensus       208 avG~  211 (285)
T PRK14189        208 AVGK  211 (285)
T ss_pred             cCCC
Confidence            8873

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=96.67  E-value=0.0094  Score=50.27  Aligned_cols=72  Identities=19%  Similarity=0.153  Sum_probs=50.1

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCC-CeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEE
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKG-YMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVF   82 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi   82 (248)
                      +.+++|+|.|+ |.+|..+++.|...| .+|++++|+.... ....+.+    +.      +..+.+++...+.+.|+||
T Consensus       176 l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra-~~la~~~----g~------~~~~~~~~~~~l~~aDvVi  243 (311)
T cd05213         176 LKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERA-EELAKEL----GG------NAVPLDELLELLNEADVVI  243 (311)
T ss_pred             ccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHH-HHHHHHc----CC------eEEeHHHHHHHHhcCCEEE
Confidence            57899999987 999999999999866 6788898876322 1222221    11      1223345667778899999


Q ss_pred             Ecccc
Q 025755           83 HVACP   87 (248)
Q Consensus        83 ~~ag~   87 (248)
                      .+.+.
T Consensus       244 ~at~~  248 (311)
T cd05213         244 SATGA  248 (311)
T ss_pred             ECCCC
Confidence            98864

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.67  E-value=0.0068  Score=50.06  Aligned_cols=57  Identities=11%  Similarity=0.002  Sum_probs=47.1

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEE
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFH   83 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~   83 (248)
                      +.||+++|.|.+..+|+-++..|+++|++|+++....                            .++.+..++.|+||.
T Consensus       162 l~Gk~vvViGrs~iVGkPla~lL~~~~atVtv~hs~T----------------------------~~l~~~~~~ADIvv~  213 (287)
T PRK14176        162 IEGKNAVIVGHSNVVGKPMAAMLLNRNATVSVCHVFT----------------------------DDLKKYTLDADILVV  213 (287)
T ss_pred             CCCCEEEEECCCcccHHHHHHHHHHCCCEEEEEeccC----------------------------CCHHHHHhhCCEEEE
Confidence            7899999999999999999999999999999876332                            124556677899998


Q ss_pred             ccccC
Q 025755           84 VACPV   88 (248)
Q Consensus        84 ~ag~~   88 (248)
                      .+|..
T Consensus       214 AvG~p  218 (287)
T PRK14176        214 ATGVK  218 (287)
T ss_pred             ccCCc
Confidence            88864

>KOG1494 consensus NAD-dependent malate dehydrogenase [Energy production and conversion]

Probab=96.66  E-value=0.015  Score=47.41  Aligned_cols=115  Identities=18%  Similarity=0.048  Sum_probs=72.2

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeE---EEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEE
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMV---HGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGV   81 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V---~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~v   81 (248)
                      .+.+|.|.||+||||.-+.-.| +....|   .+++......-...+..+.     -........-.+.+++++++.|+|
T Consensus        27 ~~~KVAvlGAaGGIGQPLSLLl-K~np~Vs~LaLYDi~~~~GVaaDlSHI~-----T~s~V~g~~g~~~L~~al~~advV  100 (345)
T KOG1494|consen   27 RGLKVAVLGAAGGIGQPLSLLL-KLNPLVSELALYDIANTPGVAADLSHIN-----TNSSVVGFTGADGLENALKGADVV  100 (345)
T ss_pred             CcceEEEEecCCccCccHHHHH-hcCcccceeeeeecccCCcccccccccC-----CCCceeccCChhHHHHHhcCCCEE
Confidence            4579999999999999988554 555433   3333332211111111000     011112334467899999999999


Q ss_pred             EEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCC-CEEEEEe
Q 025755           82 FHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKV-KRVVVVS  127 (248)
Q Consensus        82 i~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~-~~iV~vS  127 (248)
                      |--||+.+..-+..  ++.|++|..-.+.+..++.+.-. ..+.+||
T Consensus       101 vIPAGVPRKPGMTR--DDLFn~NAgIv~~l~~aia~~cP~A~i~vIs  145 (345)
T KOG1494|consen  101 VIPAGVPRKPGMTR--DDLFNINAGIVKTLAAAIAKCCPNALILVIS  145 (345)
T ss_pred             EecCCCCCCCCCcH--HHhhhcchHHHHHHHHHHHhhCccceeEeec
Confidence            99999866544333  57889999989999998887733 3455554

>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional

Probab=96.66  E-value=0.0056  Score=52.98  Aligned_cols=35  Identities=29%  Similarity=0.423  Sum_probs=32.4

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCC
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDP   40 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~   40 (248)
                      +++|.|.||.|.+|..++..|.+.|++|++++|+.
T Consensus        98 ~~~I~IiGG~GlmG~slA~~l~~~G~~V~~~d~~~  132 (374)
T PRK11199         98 LRPVVIVGGKGQLGRLFAKMLTLSGYQVRILEQDD  132 (374)
T ss_pred             cceEEEEcCCChhhHHHHHHHHHCCCeEEEeCCCc
Confidence            47899999999999999999999999999999863

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=96.66  E-value=0.046  Score=40.01  Aligned_cols=104  Identities=15%  Similarity=0.156  Sum_probs=64.8

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCC-eEEEEEcCCCchhh-----------------HH-hhhhcCCC--CCeEEEEcc
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGY-MVHGTVRDPCDEKN-----------------AH-LKKLEGAS--ENLQLFKTD   64 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~-----------------~~-~~~~~~~~--~~~~~~~~D   64 (248)
                      .++|+|.|++ ++|+.+++.|++.|. ++++++.+.-+...                 .. .+.+....  -++..+..+
T Consensus         2 ~~~v~iiG~G-~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~   80 (135)
T PF00899_consen    2 NKRVLIIGAG-GVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEK   80 (135)
T ss_dssp             T-EEEEESTS-HHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESH
T ss_pred             CCEEEEECcC-HHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeecc
Confidence            4688888765 599999999999997 68888764421100                 01 11111222  235555566


Q ss_pred             CCCHHHHHHHhCCCCEEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEecc
Q 025755           65 LLDYEALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSI  129 (248)
Q Consensus        65 i~d~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~  129 (248)
                      + +.+....++++.|+||.+...                 ...-..+.+++++.+. .+|+.+..
T Consensus        81 ~-~~~~~~~~~~~~d~vi~~~d~-----------------~~~~~~l~~~~~~~~~-p~i~~~~~  126 (135)
T PF00899_consen   81 I-DEENIEELLKDYDIVIDCVDS-----------------LAARLLLNEICREYGI-PFIDAGVN  126 (135)
T ss_dssp             C-SHHHHHHHHHTSSEEEEESSS-----------------HHHHHHHHHHHHHTT--EEEEEEEE
T ss_pred             c-ccccccccccCCCEEEEecCC-----------------HHHHHHHHHHHHHcCC-CEEEEEee
Confidence            6 456678888899999987521                 2233457777888764 77777653

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.65  E-value=0.0059  Score=50.39  Aligned_cols=59  Identities=14%  Similarity=0.054  Sum_probs=47.4

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEE
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVF   82 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi   82 (248)
                      +++||+|+|.|.++-+|+-++..|+++|++|+++ ++..                           .++....+..|+||
T Consensus       155 ~l~Gk~v~vIG~S~ivG~Pla~lL~~~gatVtv~-~s~t---------------------------~~l~~~~~~ADIVI  206 (284)
T PRK14179        155 ELEGKHAVVIGRSNIVGKPMAQLLLDKNATVTLT-HSRT---------------------------RNLAEVARKADILV  206 (284)
T ss_pred             CCCCCEEEEECCCCcCcHHHHHHHHHCCCEEEEE-CCCC---------------------------CCHHHHHhhCCEEE
Confidence            3789999999999999999999999999999987 2221                           03556667889999


Q ss_pred             EccccCC
Q 025755           83 HVACPVP   89 (248)
Q Consensus        83 ~~ag~~~   89 (248)
                      -+.|...
T Consensus       207 ~avg~~~  213 (284)
T PRK14179        207 VAIGRGH  213 (284)
T ss_pred             EecCccc
Confidence            8887543

>cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins

Probab=96.64  E-value=0.027  Score=47.24  Aligned_cols=111  Identities=20%  Similarity=0.103  Sum_probs=67.7

Q ss_pred             EEEEcCccHHHHHHHHHHHHCCC-eEEEEEcCCCchhhHHh--hhhcC-CCCCeEEEEccCCCHHHHHHHhCCCCEEEEc
Q 025755            9 VCVTGAGGYIASWLVKYLLLKGY-MVHGTVRDPCDEKNAHL--KKLEG-ASENLQLFKTDLLDYEALCAATAGCTGVFHV   84 (248)
Q Consensus         9 vlVtG~~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~~~~--~~~~~-~~~~~~~~~~Di~d~~~~~~~~~~id~vi~~   84 (248)
                      |.|+|+ |.+|..++..|+.+|. +|++++++.+.......  ..... ......+...  .|   . ..++++|+||.+
T Consensus         1 I~IIGa-G~vG~~ia~~la~~~l~eV~L~Di~e~~~~g~~~dl~~~~~~~~~~~~I~~t--~d---~-~~l~dADiVIit   73 (300)
T cd01339           1 ISIIGA-GNVGATLAQLLALKELGDVVLLDIVEGLPQGKALDISQAAPILGSDTKVTGT--ND---Y-EDIAGSDVVVIT   73 (300)
T ss_pred             CEEECC-CHHHHHHHHHHHhCCCcEEEEEeCCCcHHHHHHHHHHHhhhhcCCCeEEEEc--CC---H-HHhCCCCEEEEe
Confidence            468898 9999999999998876 99999998643221111  11111 0111222110  12   2 236889999999


Q ss_pred             cccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCC-EEEEEec
Q 025755           85 ACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVK-RVVVVSS  128 (248)
Q Consensus        85 ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~-~iV~vSS  128 (248)
                      +|......  ..-.+.+..|+.-.+.+++.+.+.... .+|.+|-
T Consensus        74 ~g~p~~~~--~~r~e~~~~n~~i~~~i~~~i~~~~p~~~iIv~sN  116 (300)
T cd01339          74 AGIPRKPG--MSRDDLLGTNAKIVKEVAENIKKYAPNAIVIVVTN  116 (300)
T ss_pred             cCCCCCcC--CCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence            98643321  111346677888888888888877543 4456554

Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.64  E-value=0.013  Score=52.43  Aligned_cols=77  Identities=18%  Similarity=-0.031  Sum_probs=51.2

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEE
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFH   83 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~   83 (248)
                      +++++|+|.|+ |++|.++++.|.++|++|++++++.........+.+..  ..+.++.++-..      ...++|.||.
T Consensus        14 ~~~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~--~gv~~~~~~~~~------~~~~~D~Vv~   84 (480)
T PRK01438         14 WQGLRVVVAGL-GVSGFAAADALLELGARVTVVDDGDDERHRALAAILEA--LGATVRLGPGPT------LPEDTDLVVT   84 (480)
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHH--cCCEEEECCCcc------ccCCCCEEEE
Confidence            56889999997 67999999999999999999987653222222222322  245555433221      2346899998


Q ss_pred             ccccCC
Q 025755           84 VACPVP   89 (248)
Q Consensus        84 ~ag~~~   89 (248)
                      ..|+.+
T Consensus        85 s~Gi~~   90 (480)
T PRK01438         85 SPGWRP   90 (480)
T ss_pred             CCCcCC
Confidence            888754

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=96.64  E-value=0.052  Score=43.97  Aligned_cols=105  Identities=21%  Similarity=0.179  Sum_probs=62.6

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCC-eEEEEEcCCCchhh------------------HHhhhhcCCCCCeEEEE--
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGY-MVHGTVRDPCDEKN------------------AHLKKLEGASENLQLFK--   62 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~------------------~~~~~~~~~~~~~~~~~--   62 (248)
                      +++.+|+|.|+ ||+|+.+++.|++.|. ++++++++.-+...                  ...+.+...++.+.+..  
T Consensus        22 L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~inp~v~i~~~~  100 (240)
T TIGR02355        22 LKASRVLIVGL-GGLGCAASQYLAAAGVGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQINPHIAINPIN  100 (240)
T ss_pred             HhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHHCCCcEEEEEe
Confidence            56778999876 5699999999999995 77777765432110                  00112222233443333  


Q ss_pred             ccCCCHHHHHHHhCCCCEEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEec
Q 025755           63 TDLLDYEALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSS  128 (248)
Q Consensus        63 ~Di~d~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS  128 (248)
                      ..+ +.+.+.+++++.|+||.+.-.                 ...-..+.++|.+.+. .+|+-++
T Consensus       101 ~~i-~~~~~~~~~~~~DlVvd~~D~-----------------~~~r~~ln~~~~~~~i-p~v~~~~  147 (240)
T TIGR02355       101 AKL-DDAELAALIAEHDIVVDCTDN-----------------VEVRNQLNRQCFAAKV-PLVSGAA  147 (240)
T ss_pred             ccC-CHHHHHHHhhcCCEEEEcCCC-----------------HHHHHHHHHHHHHcCC-CEEEEEe
Confidence            333 345567778888988877621                 1223445677777764 6666543

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=96.62  E-value=0.015  Score=49.11  Aligned_cols=36  Identities=31%  Similarity=0.327  Sum_probs=32.2

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCC
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDP   40 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~   40 (248)
                      .+.+|+|+|++|++|..+++.+...|.+|++++++.
T Consensus       138 ~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~  173 (325)
T TIGR02825       138 GGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSD  173 (325)
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCH
Confidence            468999999999999999998888999999888765

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=96.60  E-value=0.011  Score=50.27  Aligned_cols=96  Identities=14%  Similarity=0.144  Sum_probs=54.2

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEE--EEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEE
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHG--TVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVF   82 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~--~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi   82 (248)
                      +|.+|.|+||||.+|.++++.|.++++.+.-  ..++.+...+. +. +   .+    ...++.+.+.. . ++++|+|+
T Consensus         3 ~~~~IaIvGATG~vG~eLlrlL~~~~hP~~~l~~v~s~~~aG~~-l~-~---~~----~~l~~~~~~~~-~-~~~vD~vF   71 (336)
T PRK05671          3 QPLDIAVVGATGTVGEALVQILEERDFPVGTLHLLASSESAGHS-VP-F---AG----KNLRVREVDSF-D-FSQVQLAF   71 (336)
T ss_pred             CCCEEEEEccCCHHHHHHHHHHhhCCCCceEEEEEECcccCCCe-ec-c---CC----cceEEeeCChH-H-hcCCCEEE
Confidence            3479999999999999999999977663332  22332211100 11 0   11    11222222211 1 36899998


Q ss_pred             EccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccc
Q 025755           83 HVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIG  130 (248)
Q Consensus        83 ~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~  130 (248)
                      -+++. .                 .+..+++.+.+.|. ++|-.||..
T Consensus        72 la~p~-~-----------------~s~~~v~~~~~~G~-~VIDlS~~f  100 (336)
T PRK05671         72 FAAGA-A-----------------VSRSFAEKARAAGC-SVIDLSGAL  100 (336)
T ss_pred             EcCCH-H-----------------HHHHHHHHHHHCCC-eEEECchhh
Confidence            76641 0                 12347777777664 677777643

>PLN00203 glutamyl-tRNA reductase

Probab=96.58  E-value=0.013  Score=52.81  Aligned_cols=75  Identities=24%  Similarity=0.266  Sum_probs=51.8

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCC-eEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEE
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGY-MVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVF   82 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi   82 (248)
                      +.+++|+|.|+ |.+|..+++.|...|+ +|+++.|+.... ......+.    ....   .+...+++..++.+.|+||
T Consensus       264 l~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era-~~La~~~~----g~~i---~~~~~~dl~~al~~aDVVI  334 (519)
T PLN00203        264 HASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERV-AALREEFP----DVEI---IYKPLDEMLACAAEADVVF  334 (519)
T ss_pred             CCCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHH-HHHHHHhC----CCce---EeecHhhHHHHHhcCCEEE
Confidence            67899999999 9999999999999996 799999886422 22222211    1111   1223345667778999999


Q ss_pred             Ecccc
Q 025755           83 HVACP   87 (248)
Q Consensus        83 ~~ag~   87 (248)
                      .+.+.
T Consensus       335 sAT~s  339 (519)
T PLN00203        335 TSTSS  339 (519)
T ss_pred             EccCC
Confidence            87654

>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.56  E-value=0.021  Score=50.69  Aligned_cols=77  Identities=14%  Similarity=0.126  Sum_probs=52.3

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEE
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFH   83 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~   83 (248)
                      +++|+++|+|.+ ++|.++++.|+++|++|++.+.+.....   ...+......+.++.+... ..    .+.+.|.||.
T Consensus         3 ~~~~~~~v~G~g-~~G~~~a~~l~~~g~~v~~~d~~~~~~~---~~~l~~~~~gi~~~~g~~~-~~----~~~~~d~vv~   73 (445)
T PRK04308          3 FQNKKILVAGLG-GTGISMIAYLRKNGAEVAAYDAELKPER---VAQIGKMFDGLVFYTGRLK-DA----LDNGFDILAL   73 (445)
T ss_pred             CCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCCCchh---HHHHhhccCCcEEEeCCCC-HH----HHhCCCEEEE
Confidence            778999999975 8999999999999999999987654211   1112111124555544432 11    2357899999


Q ss_pred             ccccCC
Q 025755           84 VACPVP   89 (248)
Q Consensus        84 ~ag~~~   89 (248)
                      ..|+.+
T Consensus        74 spgi~~   79 (445)
T PRK04308         74 SPGISE   79 (445)
T ss_pred             CCCCCC
Confidence            988764

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=96.54  E-value=0.017  Score=47.68  Aligned_cols=103  Identities=24%  Similarity=0.231  Sum_probs=65.5

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHh-CCCCEEEE
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAAT-AGCTGVFH   83 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~-~~id~vi~   83 (248)
                      .|.+++|++|+|.+|+-+.+...-.|++|+++.-+.+  +...+.+..+....+++..-|+  .+.|.+++ ++||+.+-
T Consensus       150 ~GetvvVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~e--K~~~l~~~lGfD~~idyk~~d~--~~~L~~a~P~GIDvyfe  225 (340)
T COG2130         150 AGETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAE--KCDFLTEELGFDAGIDYKAEDF--AQALKEACPKGIDVYFE  225 (340)
T ss_pred             CCCEEEEEecccccchHHHHHHHhhCCeEEEecCCHH--HHHHHHHhcCCceeeecCcccH--HHHHHHHCCCCeEEEEE
Confidence            5799999999999999999887778999999987753  3333333222222233333333  23444443 47999999


Q ss_pred             ccccCCCCCCCCccccchhhhHHHHHHHHHHHHhc--CCCEEEEEeccceec
Q 025755           84 VACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKA--KVKRVVVVSSIGAVM  133 (248)
Q Consensus        84 ~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~--~~~~iV~vSS~~~~~  133 (248)
                      |.|--                      +++++...  ...||+.++-++.|.
T Consensus       226 NVGg~----------------------v~DAv~~~ln~~aRi~~CG~IS~YN  255 (340)
T COG2130         226 NVGGE----------------------VLDAVLPLLNLFARIPVCGAISQYN  255 (340)
T ss_pred             cCCch----------------------HHHHHHHhhccccceeeeeehhhcC
Confidence            98741                      33333322  235888888766543

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=96.49  E-value=0.0097  Score=52.09  Aligned_cols=37  Identities=27%  Similarity=0.132  Sum_probs=33.4

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCC
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPC   41 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~   41 (248)
                      +.+++++|+|. |.||+.+++.|...|.+|+++++++.
T Consensus       210 l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp~  246 (425)
T PRK05476        210 IAGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDPI  246 (425)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCch
Confidence            57899999996 78999999999999999999998764

>PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.49  E-value=0.0096  Score=49.09  Aligned_cols=59  Identities=15%  Similarity=0.040  Sum_probs=46.7

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEE
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVF   82 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi   82 (248)
                      +++||+++|.|.+..+|+-++..|+++|++|+++.....                            ++....+..|+||
T Consensus       155 ~l~Gk~vvViGrS~~VGkPla~lL~~~~ATVt~chs~T~----------------------------dl~~~~k~ADIvI  206 (282)
T PRK14180        155 KTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFTT----------------------------DLKSHTTKADILI  206 (282)
T ss_pred             CCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEEcCCCC----------------------------CHHHHhhhcCEEE
Confidence            378999999999999999999999999999988754321                            2444456788888


Q ss_pred             EccccCC
Q 025755           83 HVACPVP   89 (248)
Q Consensus        83 ~~ag~~~   89 (248)
                      ..+|...
T Consensus       207 sAvGkp~  213 (282)
T PRK14180        207 VAVGKPN  213 (282)
T ss_pred             EccCCcC
Confidence            8887543

>PLN02928 oxidoreductase family protein

Probab=96.47  E-value=0.013  Score=50.16  Aligned_cols=81  Identities=17%  Similarity=0.044  Sum_probs=51.4

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEE
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVF   82 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi   82 (248)
                      .+.+|++.|.|- |.||+.+++.|...|++|++++|+.......... ++.  ..+.-+........++..++++.|+|+
T Consensus       156 ~l~gktvGIiG~-G~IG~~vA~~l~afG~~V~~~dr~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~L~ell~~aDiVv  231 (347)
T PLN02928        156 TLFGKTVFILGY-GAIGIELAKRLRPFGVKLLATRRSWTSEPEDGLL-IPN--GDVDDLVDEKGGHEDIYEFAGEADIVV  231 (347)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCCCChhhhhhhc-ccc--ccccccccccCcccCHHHHHhhCCEEE
Confidence            378999999987 7899999999999999999998864211111000 000  000000001113456888888999998


Q ss_pred             Ecccc
Q 025755           83 HVACP   87 (248)
Q Consensus        83 ~~ag~   87 (248)
                      .+.-.
T Consensus       232 l~lPl  236 (347)
T PLN02928        232 LCCTL  236 (347)
T ss_pred             ECCCC
Confidence            87743

>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.47  E-value=0.0098  Score=48.95  Aligned_cols=59  Identities=12%  Similarity=0.033  Sum_probs=47.2

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEE
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVF   82 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi   82 (248)
                      +++||+++|.|.+..+|+-++..|+++|++|+++....                            .++....+..|+||
T Consensus       155 ~l~Gk~vvViGrS~~VGkPla~lL~~~~AtVt~chs~T----------------------------~~l~~~~~~ADIvI  206 (278)
T PRK14172        155 DIEGKEVVVIGRSNIVGKPVAQLLLNENATVTICHSKT----------------------------KNLKEVCKKADILV  206 (278)
T ss_pred             CCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCC----------------------------CCHHHHHhhCCEEE
Confidence            37899999999999999999999999999998875322                            12455566789999


Q ss_pred             EccccCC
Q 025755           83 HVACPVP   89 (248)
Q Consensus        83 ~~ag~~~   89 (248)
                      ..+|...
T Consensus       207 sAvGkp~  213 (278)
T PRK14172        207 VAIGRPK  213 (278)
T ss_pred             EcCCCcC
Confidence            8887543

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=96.46  E-value=0.02  Score=47.71  Aligned_cols=74  Identities=19%  Similarity=0.205  Sum_probs=48.9

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCH---HHHHHHh--CCCC
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDY---EALCAAT--AGCT   79 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~---~~~~~~~--~~id   79 (248)
                      ++++++|+|+++++|..+++.+...|.+|++++++...  .+....+   ..+ ..  .|..+.   +.+.+..  +++|
T Consensus       144 ~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~--~~~~~~~---g~~-~~--~~~~~~~~~~~~~~~~~~~~~d  215 (325)
T cd08253         144 AGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEG--AELVRQA---GAD-AV--FNYRAEDLADRILAATAGQGVD  215 (325)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHH--HHHHHHc---CCC-EE--EeCCCcCHHHHHHHHcCCCceE
Confidence            57899999999999999999999999999998886532  1222221   111 11  233332   2333333  2589


Q ss_pred             EEEEccc
Q 025755           80 GVFHVAC   86 (248)
Q Consensus        80 ~vi~~ag   86 (248)
                      .++++++
T Consensus       216 ~vi~~~~  222 (325)
T cd08253         216 VIIEVLA  222 (325)
T ss_pred             EEEECCc
Confidence            9999886

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.45  E-value=0.01  Score=49.11  Aligned_cols=58  Identities=17%  Similarity=0.044  Sum_probs=46.5

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEE
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVF   82 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi   82 (248)
                      +++||+++|.|.+..+|+=++..|++++++|+++.....                            +++...++.|+||
T Consensus       152 ~l~Gk~vvViGrS~iVGkPla~lL~~~~aTVtichs~T~----------------------------~l~~~~~~ADIvI  203 (287)
T PRK14173        152 PLAGKEVVVVGRSNIVGKPLAALLLREDATVTLAHSKTQ----------------------------DLPAVTRRADVLV  203 (287)
T ss_pred             CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEeCCCCC----------------------------CHHHHHhhCCEEE
Confidence            378999999999999999999999999999997653321                            2445566789998


Q ss_pred             EccccC
Q 025755           83 HVACPV   88 (248)
Q Consensus        83 ~~ag~~   88 (248)
                      .++|..
T Consensus       204 sAvGkp  209 (287)
T PRK14173        204 VAVGRP  209 (287)
T ss_pred             EecCCc
Confidence            888754

>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.44  E-value=0.01  Score=48.96  Aligned_cols=59  Identities=8%  Similarity=-0.037  Sum_probs=47.1

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEE
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVF   82 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi   82 (248)
                      ++.||+++|.|.+..+|+-++..|+++|++|+++....                            .+++...+..|+||
T Consensus       156 ~l~Gk~vvViGrS~iVGkPla~lL~~~~atVt~chs~T----------------------------~~l~~~~~~ADIvI  207 (284)
T PRK14177        156 DVTGKNAVVVGRSPILGKPMAMLLTEMNATVTLCHSKT----------------------------QNLPSIVRQADIIV  207 (284)
T ss_pred             CCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCC----------------------------CCHHHHHhhCCEEE
Confidence            37899999999999999999999999999999875322                            12445566789999


Q ss_pred             EccccCC
Q 025755           83 HVACPVP   89 (248)
Q Consensus        83 ~~ag~~~   89 (248)
                      .++|...
T Consensus       208 sAvGk~~  214 (284)
T PRK14177        208 GAVGKPE  214 (284)
T ss_pred             EeCCCcC
Confidence            8877543

>PRK06849 hypothetical protein; Provisional

Probab=96.44  E-value=0.018  Score=50.09  Aligned_cols=36  Identities=25%  Similarity=0.088  Sum_probs=33.7

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCC
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDP   40 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~   40 (248)
                      ++|+|||||++..+|..+++.|.+.|++|++++.+.
T Consensus         3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~   38 (389)
T PRK06849          3 TKKTVLITGARAPAALELARLFHNAGHTVILADSLK   38 (389)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCc
Confidence            578999999999999999999999999999998875

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=96.42  E-value=0.0036  Score=47.55  Aligned_cols=35  Identities=26%  Similarity=0.323  Sum_probs=29.5

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCC
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPC   41 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~   41 (248)
                      |++|.+.|- |-+|+.+++.|+++|++|++++|+++
T Consensus         1 m~~Ig~IGl-G~mG~~~a~~L~~~g~~v~~~d~~~~   35 (163)
T PF03446_consen    1 MMKIGFIGL-GNMGSAMARNLAKAGYEVTVYDRSPE   35 (163)
T ss_dssp             -BEEEEE---SHHHHHHHHHHHHTTTEEEEEESSHH
T ss_pred             CCEEEEEch-HHHHHHHHHHHHhcCCeEEeeccchh
Confidence            578999987 78999999999999999999998863

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=96.42  E-value=0.022  Score=47.94  Aligned_cols=36  Identities=31%  Similarity=0.383  Sum_probs=32.4

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCC
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDP   40 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~   40 (248)
                      .+.+++|+||+|++|..+++.+...|.+|+++.++.
T Consensus       143 ~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~  178 (329)
T cd08294         143 AGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSD  178 (329)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCH
Confidence            468999999999999999999988999999888765

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.41  E-value=0.011  Score=49.12  Aligned_cols=58  Identities=16%  Similarity=0.053  Sum_probs=46.2

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEE
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVF   82 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi   82 (248)
                      +++||+++|.|.+..+|+-++..|+++|++|+++....                            .+++...++.|+||
T Consensus       155 ~l~Gk~vvVIGrS~iVGkPla~lL~~~~atVtv~hs~T----------------------------~~l~~~~~~ADIvI  206 (297)
T PRK14186        155 DIAGKKAVVVGRSILVGKPLALMLLAANATVTIAHSRT----------------------------QDLASITREADILV  206 (297)
T ss_pred             CCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCC----------------------------CCHHHHHhhCCEEE
Confidence            37899999999999999999999999999998874321                            12445566788888


Q ss_pred             EccccC
Q 025755           83 HVACPV   88 (248)
Q Consensus        83 ~~ag~~   88 (248)
                      .++|..
T Consensus       207 sAvGkp  212 (297)
T PRK14186        207 AAAGRP  212 (297)
T ss_pred             EccCCc
Confidence            888753

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=96.40  E-value=0.018  Score=47.88  Aligned_cols=75  Identities=15%  Similarity=0.108  Sum_probs=48.9

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCH---HHHHHHh--CCCC
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDY---EALCAAT--AGCT   79 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~---~~~~~~~--~~id   79 (248)
                      ++++++|+|++|++|..+++.+...|++|+++.++...  ....+.+   ..+ ..  .|..+.   +.+.+..  +++|
T Consensus       139 ~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~--~~~~~~~---g~~-~~--~~~~~~~~~~~~~~~~~~~~~d  210 (323)
T cd05276         139 AGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEK--LEACRAL---GAD-VA--INYRTEDFAEEVKEATGGRGVD  210 (323)
T ss_pred             CCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHH--HHHHHHc---CCC-EE--EeCCchhHHHHHHHHhCCCCeE
Confidence            56899999999999999999999999999988876531  1222221   111 11  222222   2233333  2589


Q ss_pred             EEEEcccc
Q 025755           80 GVFHVACP   87 (248)
Q Consensus        80 ~vi~~ag~   87 (248)
                      ++++++|.
T Consensus       211 ~vi~~~g~  218 (323)
T cd05276         211 VILDMVGG  218 (323)
T ss_pred             EEEECCch
Confidence            99999873

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=96.39  E-value=0.008  Score=47.30  Aligned_cols=37  Identities=22%  Similarity=0.195  Sum_probs=33.3

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCC
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDP   40 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~   40 (248)
                      ++++|+++|+|.+ .+|+.+++.|.+.|++|++.+++.
T Consensus        25 ~l~gk~v~I~G~G-~vG~~~A~~L~~~G~~Vvv~D~~~   61 (200)
T cd01075          25 SLEGKTVAVQGLG-KVGYKLAEHLLEEGAKLIVADINE   61 (200)
T ss_pred             CCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCH
Confidence            4788999999985 799999999999999999888775

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>PRK13243 glyoxylate reductase; Reviewed

Probab=96.37  E-value=0.011  Score=50.27  Aligned_cols=67  Identities=15%  Similarity=-0.013  Sum_probs=47.8

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEE
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVF   82 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi   82 (248)
                      ++.+|+|.|.|- |.||+.+++.|...|++|++++|+....   ....     ..+.        ..++..++++.|+|+
T Consensus       147 ~L~gktvgIiG~-G~IG~~vA~~l~~~G~~V~~~d~~~~~~---~~~~-----~~~~--------~~~l~ell~~aDiV~  209 (333)
T PRK13243        147 DVYGKTIGIIGF-GRIGQAVARRAKGFGMRILYYSRTRKPE---AEKE-----LGAE--------YRPLEELLRESDFVS  209 (333)
T ss_pred             CCCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCChh---hHHH-----cCCE--------ecCHHHHHhhCCEEE
Confidence            378999999998 8899999999999999999998875321   1110     0111        124556777889888


Q ss_pred             Eccc
Q 025755           83 HVAC   86 (248)
Q Consensus        83 ~~ag   86 (248)
                      .+.-
T Consensus       210 l~lP  213 (333)
T PRK13243        210 LHVP  213 (333)
T ss_pred             EeCC
Confidence            7763

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=96.37  E-value=0.0029  Score=44.12  Aligned_cols=37  Identities=27%  Similarity=0.267  Sum_probs=31.5

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCC
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDP   40 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~   40 (248)
                      ++++++|+|+|| |.+|.+-++.|++.|++|++++...
T Consensus         4 ~l~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~~   40 (103)
T PF13241_consen    4 DLKGKRVLVVGG-GPVAARKARLLLEAGAKVTVISPEI   40 (103)
T ss_dssp             --TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESSE
T ss_pred             EcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCch
Confidence            578999999999 8899999999999999999998764

>PRK14183 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.36  E-value=0.012  Score=48.55  Aligned_cols=59  Identities=20%  Similarity=0.074  Sum_probs=46.5

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEE
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVF   82 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi   82 (248)
                      +++||+++|.|.+..+|+-++..|+++|++|+++. +..                           .++....+..|+||
T Consensus       154 ~l~Gk~vvViGrS~~VG~Pla~lL~~~~AtVti~h-s~T---------------------------~~l~~~~~~ADIvV  205 (281)
T PRK14183        154 DVKGKDVCVVGASNIVGKPMAALLLNANATVDICH-IFT---------------------------KDLKAHTKKADIVI  205 (281)
T ss_pred             CCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeC-CCC---------------------------cCHHHHHhhCCEEE
Confidence            37899999999999999999999999999998653 321                           11345667789999


Q ss_pred             EccccCC
Q 025755           83 HVACPVP   89 (248)
Q Consensus        83 ~~ag~~~   89 (248)
                      .++|...
T Consensus       206 ~AvGkp~  212 (281)
T PRK14183        206 VGVGKPN  212 (281)
T ss_pred             EecCccc
Confidence            8887543

>PRK08057 cobalt-precorrin-6x reductase; Reviewed

Probab=96.36  E-value=0.098  Score=42.56  Aligned_cols=72  Identities=18%  Similarity=0.081  Sum_probs=55.4

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC--CCCEEEE
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA--GCTGVFH   83 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~--~id~vi~   83 (248)
                      +++|+|.|||+ =|+.+++.|.+.|+.|++........         .....+....+-+.|.+++..+++  +++.||.
T Consensus         2 ~~~IlvlgGT~-egr~la~~L~~~g~~v~~Svat~~g~---------~~~~~~~v~~G~l~~~~~l~~~l~~~~i~~VID   71 (248)
T PRK08057          2 MPRILLLGGTS-EARALARALAAAGVDIVLSLAGRTGG---------PADLPGPVRVGGFGGAEGLAAYLREEGIDLVID   71 (248)
T ss_pred             CceEEEEechH-HHHHHHHHHHhCCCeEEEEEccCCCC---------cccCCceEEECCCCCHHHHHHHHHHCCCCEEEE
Confidence            47899999998 79999999999999988876554211         112356677788778999999986  6899998


Q ss_pred             cccc
Q 025755           84 VACP   87 (248)
Q Consensus        84 ~ag~   87 (248)
                      ..=+
T Consensus        72 ATHP   75 (248)
T PRK08057         72 ATHP   75 (248)
T ss_pred             CCCc
Confidence            7643

>cd08293 PTGR2 Prostaglandin reductase

Probab=96.35  E-value=0.024  Score=48.18  Aligned_cols=34  Identities=26%  Similarity=0.247  Sum_probs=30.7

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCCC-eEEEEEcCC
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKGY-MVHGTVRDP   40 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g~-~V~~~~r~~   40 (248)
                      .+|+|+|++|++|..+++.+...|+ +|++++++.
T Consensus       156 ~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~  190 (345)
T cd08293         156 QTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSD  190 (345)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCH
Confidence            7999999999999999998888898 799888765

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.35  E-value=0.015  Score=48.10  Aligned_cols=57  Identities=14%  Similarity=0.054  Sum_probs=46.5

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEE
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFH   83 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~   83 (248)
                      ++||+++|.|.+..+|+-++..|+++|++|+++....                            .++....++.|+||-
T Consensus       156 l~Gk~vvViGrS~iVG~Pla~lL~~~~atVt~chs~t----------------------------~~l~~~~~~ADIvI~  207 (284)
T PRK14190        156 ISGKHVVVVGRSNIVGKPVGQLLLNENATVTYCHSKT----------------------------KNLAELTKQADILIV  207 (284)
T ss_pred             CCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEeCCc----------------------------hhHHHHHHhCCEEEE
Confidence            7899999999999999999999999999999864221                            245566777899988


Q ss_pred             ccccC
Q 025755           84 VACPV   88 (248)
Q Consensus        84 ~ag~~   88 (248)
                      ..|..
T Consensus       208 AvG~p  212 (284)
T PRK14190        208 AVGKP  212 (284)
T ss_pred             ecCCC
Confidence            87653

>PRK14187 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.31  E-value=0.013  Score=48.56  Aligned_cols=59  Identities=10%  Similarity=0.003  Sum_probs=47.0

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEE
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVF   82 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi   82 (248)
                      +++||+++|.|.+.-+|+-++..|++++++|+++....                            .++....++.|+||
T Consensus       157 ~l~Gk~vvViGrS~iVGkPla~lL~~~~aTVt~chs~T----------------------------~~l~~~~~~ADIvV  208 (294)
T PRK14187        157 NLSGSDAVVIGRSNIVGKPMACLLLGENCTVTTVHSAT----------------------------RDLADYCSKADILV  208 (294)
T ss_pred             CCCCCEEEEECCCccchHHHHHHHhhCCCEEEEeCCCC----------------------------CCHHHHHhhCCEEE
Confidence            37899999999999999999999999999999765322                            12455566788888


Q ss_pred             EccccCC
Q 025755           83 HVACPVP   89 (248)
Q Consensus        83 ~~ag~~~   89 (248)
                      ..+|...
T Consensus       209 sAvGkp~  215 (294)
T PRK14187        209 AAVGIPN  215 (294)
T ss_pred             EccCCcC
Confidence            8887543

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=96.30  E-value=0.014  Score=49.54  Aligned_cols=36  Identities=28%  Similarity=0.365  Sum_probs=32.5

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCC
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDP   40 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~   40 (248)
                      .+.+++|+|++|++|..+++.+...|.+|++++++.
T Consensus       151 ~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~  186 (338)
T cd08295         151 KGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSD  186 (338)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCH
Confidence            478999999999999999998888999999888775

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.30  E-value=0.014  Score=48.11  Aligned_cols=58  Identities=12%  Similarity=0.012  Sum_probs=46.4

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEE
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFH   83 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~   83 (248)
                      ++||+++|.|.+..+|+=++..|+++|++|+++.....                            ++....++.|+||.
T Consensus       154 l~Gk~vvViGrS~iVGkPla~lL~~~~atVtichs~T~----------------------------~l~~~~~~ADIvI~  205 (282)
T PRK14169        154 VAGKRVVIVGRSNIVGRPLAGLMVNHDATVTIAHSKTR----------------------------NLKQLTKEADILVV  205 (282)
T ss_pred             CCCCEEEEECCCccchHHHHHHHHHCCCEEEEECCCCC----------------------------CHHHHHhhCCEEEE
Confidence            78999999999999999999999999999998643221                            24555667788888


Q ss_pred             ccccCC
Q 025755           84 VACPVP   89 (248)
Q Consensus        84 ~ag~~~   89 (248)
                      ..|...
T Consensus       206 AvG~p~  211 (282)
T PRK14169        206 AVGVPH  211 (282)
T ss_pred             ccCCcC
Confidence            887543

>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.27  E-value=0.014  Score=48.13  Aligned_cols=59  Identities=12%  Similarity=0.050  Sum_probs=46.8

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEE
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVF   82 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi   82 (248)
                      ++.||+++|.|.+.-+|+=++..|++++++|+++....                            .++.+..+..|+||
T Consensus       154 ~l~Gk~vvVvGrS~iVGkPla~lL~~~~atVtichs~T----------------------------~~l~~~~~~ADIvI  205 (284)
T PRK14170        154 QIEGKRAVVIGRSNIVGKPVAQLLLNENATVTIAHSRT----------------------------KDLPQVAKEADILV  205 (284)
T ss_pred             CCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCC----------------------------CCHHHHHhhCCEEE
Confidence            37899999999999999999999999999999764321                            12455566789998


Q ss_pred             EccccCC
Q 025755           83 HVACPVP   89 (248)
Q Consensus        83 ~~ag~~~   89 (248)
                      -.+|...
T Consensus       206 ~AvG~~~  212 (284)
T PRK14170        206 VATGLAK  212 (284)
T ss_pred             EecCCcC
Confidence            8887543

>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated

Probab=96.27  E-value=0.0088  Score=50.55  Aligned_cols=34  Identities=32%  Similarity=0.293  Sum_probs=30.3

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCC
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPC   41 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~   41 (248)
                      ++|.|.|+ |.+|..++..|++.|++|++++|+..
T Consensus         2 mkI~iiG~-G~mG~~~a~~L~~~g~~V~~~~r~~~   35 (325)
T PRK00094          2 MKIAVLGA-GSWGTALAIVLARNGHDVTLWARDPE   35 (325)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHH
Confidence            57999985 88999999999999999999999753

>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2

Probab=96.26  E-value=0.028  Score=45.12  Aligned_cols=36  Identities=17%  Similarity=0.231  Sum_probs=32.2

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCC---eEEEEEcC
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGY---MVHGTVRD   39 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~---~V~~~~r~   39 (248)
                      .+++++++|.|+ |+.|+.++..|.+.|.   ++++++|+
T Consensus        22 ~l~~~rvlvlGA-GgAg~aiA~~L~~~G~~~~~i~ivdr~   60 (226)
T cd05311          22 KIEEVKIVINGA-GAAGIAIARLLLAAGAKPENIVVVDSK   60 (226)
T ss_pred             CccCCEEEEECc-hHHHHHHHHHHHHcCcCcceEEEEeCC
Confidence            367899999998 8899999999999997   59999998

Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph

>PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.24  E-value=0.015  Score=47.93  Aligned_cols=58  Identities=17%  Similarity=0.101  Sum_probs=46.8

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEE
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFH   83 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~   83 (248)
                      +.||+++|.|.+..+|+=++..|++++++|+++....                            .++....+..|+||.
T Consensus       155 l~Gk~vvVvGrS~iVGkPla~lL~~~~atVt~chs~T----------------------------~nl~~~~~~ADIvIs  206 (282)
T PRK14166        155 LEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKT----------------------------KDLSLYTRQADLIIV  206 (282)
T ss_pred             CCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCC----------------------------CCHHHHHhhCCEEEE
Confidence            7899999999999999999999999999999765332                            125556667899988


Q ss_pred             ccccCC
Q 025755           84 VACPVP   89 (248)
Q Consensus        84 ~ag~~~   89 (248)
                      ++|...
T Consensus       207 AvGkp~  212 (282)
T PRK14166        207 AAGCVN  212 (282)
T ss_pred             cCCCcC
Confidence            887543

>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.23  E-value=0.019  Score=47.75  Aligned_cols=38  Identities=21%  Similarity=0.108  Sum_probs=33.3

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCc
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCD   42 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~   42 (248)
                      ...++|.|.|+ |.+|..++..|+..|++|++++++.+.
T Consensus         3 ~~~~~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~   40 (286)
T PRK07819          3 DAIQRVGVVGA-GQMGAGIAEVCARAGVDVLVFETTEEL   40 (286)
T ss_pred             CCccEEEEEcc-cHHHHHHHHHHHhCCCEEEEEECCHHH
Confidence            34568999987 799999999999999999999998753

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=96.23  E-value=0.012  Score=44.26  Aligned_cols=69  Identities=20%  Similarity=0.159  Sum_probs=43.9

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEE
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFH   83 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~   83 (248)
                      +.+|+++|.| -|.+|+.+|+.|...|.+|+++..++-...+...       +.++..        .+.++++..|++|.
T Consensus        21 l~Gk~vvV~G-YG~vG~g~A~~lr~~Ga~V~V~e~DPi~alqA~~-------dGf~v~--------~~~~a~~~adi~vt   84 (162)
T PF00670_consen   21 LAGKRVVVIG-YGKVGKGIARALRGLGARVTVTEIDPIRALQAAM-------DGFEVM--------TLEEALRDADIFVT   84 (162)
T ss_dssp             -TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-SSHHHHHHHHH-------TT-EEE---------HHHHTTT-SEEEE
T ss_pred             eCCCEEEEeC-CCcccHHHHHHHhhCCCEEEEEECChHHHHHhhh-------cCcEec--------CHHHHHhhCCEEEE
Confidence            6789999986 5779999999999999999999988743222222       222221        35567778899988


Q ss_pred             ccccC
Q 025755           84 VACPV   88 (248)
Q Consensus        84 ~ag~~   88 (248)
                      +.|..
T Consensus        85 aTG~~   89 (162)
T PF00670_consen   85 ATGNK   89 (162)
T ss_dssp             -SSSS
T ss_pred             CCCCc
Confidence            87753

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>PLN03139 formate dehydrogenase; Provisional

Probab=96.20  E-value=0.0096  Score=51.54  Aligned_cols=68  Identities=22%  Similarity=0.080  Sum_probs=47.5

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEE
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVF   82 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi   82 (248)
                      ++.+|+|.|.| .|.||+.+++.|..-|++|++++|+....  .....            ..+.-.++++.+++.+|+|+
T Consensus       196 ~L~gktVGIVG-~G~IG~~vA~~L~afG~~V~~~d~~~~~~--~~~~~------------~g~~~~~~l~ell~~sDvV~  260 (386)
T PLN03139        196 DLEGKTVGTVG-AGRIGRLLLQRLKPFNCNLLYHDRLKMDP--ELEKE------------TGAKFEEDLDAMLPKCDVVV  260 (386)
T ss_pred             CCCCCEEEEEe-ecHHHHHHHHHHHHCCCEEEEECCCCcch--hhHhh------------cCceecCCHHHHHhhCCEEE
Confidence            47899999999 68899999999999999999988764211  11010            01111234667778899888


Q ss_pred             Ecc
Q 025755           83 HVA   85 (248)
Q Consensus        83 ~~a   85 (248)
                      .+.
T Consensus       261 l~l  263 (386)
T PLN03139        261 INT  263 (386)
T ss_pred             EeC
Confidence            765

>PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated

Probab=96.20  E-value=0.036  Score=48.25  Aligned_cols=69  Identities=19%  Similarity=0.082  Sum_probs=51.2

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC--CCCEEEE
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA--GCTGVFH   83 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~--~id~vi~   83 (248)
                      .|+|+|+|++ ..|+.++..+.+.|++|++++.++.......       .+  .++..|..|.+.+..+++  ++|.|+-
T Consensus        12 ~~~ilIiG~g-~~~~~~~~a~~~~G~~v~~~~~~~~~~~~~~-------ad--~~~~~~~~d~~~l~~~~~~~~id~vi~   81 (395)
T PRK09288         12 ATRVMLLGSG-ELGKEVAIEAQRLGVEVIAVDRYANAPAMQV-------AH--RSHVIDMLDGDALRAVIEREKPDYIVP   81 (395)
T ss_pred             CCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCCCCchHHh-------hh--heEECCCCCHHHHHHHHHHhCCCEEEE
Confidence            5689999864 6999999999999999999988764211110       01  245678889888888887  7898875


Q ss_pred             c
Q 025755           84 V   84 (248)
Q Consensus        84 ~   84 (248)
                      .
T Consensus        82 ~   82 (395)
T PRK09288         82 E   82 (395)
T ss_pred             e
Confidence            4

>PRK14171 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.20  E-value=0.016  Score=47.86  Aligned_cols=58  Identities=16%  Similarity=0.088  Sum_probs=46.3

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEE
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVF   82 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi   82 (248)
                      +++||+++|.|.+.-+|+-++..|++++++|+++....                            .++....+..|+||
T Consensus       156 ~l~GK~vvViGrS~iVGkPla~lL~~~~ATVtichs~T----------------------------~~L~~~~~~ADIvV  207 (288)
T PRK14171        156 NLTGKNVVIIGRSNIVGKPLSALLLKENCSVTICHSKT----------------------------HNLSSITSKADIVV  207 (288)
T ss_pred             CCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCC----------------------------CCHHHHHhhCCEEE
Confidence            37899999999999999999999999999998764321                            12455566789999


Q ss_pred             EccccC
Q 025755           83 HVACPV   88 (248)
Q Consensus        83 ~~ag~~   88 (248)
                      -.+|..
T Consensus       208 ~AvGkp  213 (288)
T PRK14171        208 AAIGSP  213 (288)
T ss_pred             EccCCC
Confidence            888753

>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins

Probab=96.19  E-value=0.033  Score=37.35  Aligned_cols=34  Identities=29%  Similarity=0.229  Sum_probs=29.8

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHC-CCeEEEEEc
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLK-GYMVHGTVR   38 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~-g~~V~~~~r   38 (248)
                      +.+++++|.|. |.+|+.+++.|.+. +.+|.+++|
T Consensus        21 ~~~~~v~i~G~-G~~g~~~a~~l~~~~~~~v~v~~r   55 (86)
T cd05191          21 LKGKTVVVLGA-GEVGKGIAKLLADEGGKKVVLCDR   55 (86)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcC
Confidence            67899999999 99999999999998 567777765

Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=96.19  E-value=0.095  Score=42.17  Aligned_cols=105  Identities=15%  Similarity=0.136  Sum_probs=61.1

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCC-eEEEEEcCCCchhh-----------------HH-hhhhcCCCCCeEE--EE
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGY-MVHGTVRDPCDEKN-----------------AH-LKKLEGASENLQL--FK   62 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~-----------------~~-~~~~~~~~~~~~~--~~   62 (248)
                      +++.+|+|.|.+ ++|+++++.|++.|. ++++++.+.-+...                 +. .+.+..-++.+.+  +.
T Consensus         9 L~~~~VlVvG~G-GvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V~~~~   87 (231)
T cd00755           9 LRNAHVAVVGLG-GVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEVDAVE   87 (231)
T ss_pred             HhCCCEEEECCC-HHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEEEEee
Confidence            567899999765 699999999999995 78887765421100                 00 1112222334333  33


Q ss_pred             ccCCCHHHHHHHh-CCCCEEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEec
Q 025755           63 TDLLDYEALCAAT-AGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSS  128 (248)
Q Consensus        63 ~Di~d~~~~~~~~-~~id~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS  128 (248)
                      ..++ .+....++ .+.|+||.+..                 |+..-..+.++|++.+. .+|...+
T Consensus        88 ~~i~-~~~~~~l~~~~~D~VvdaiD-----------------~~~~k~~L~~~c~~~~i-p~I~s~g  135 (231)
T cd00755          88 EFLT-PDNSEDLLGGDPDFVVDAID-----------------SIRAKVALIAYCRKRKI-PVISSMG  135 (231)
T ss_pred             eecC-HhHHHHHhcCCCCEEEEcCC-----------------CHHHHHHHHHHHHHhCC-CEEEEeC
Confidence            3333 34444554 35888887642                 12234457788888764 5555544

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.17  E-value=0.037  Score=46.83  Aligned_cols=79  Identities=22%  Similarity=0.092  Sum_probs=47.6

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhh--HH----hhhhcCCCCCeEEEEccCCCHHHHHHHhCCCC
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKN--AH----LKKLEGASENLQLFKTDLLDYEALCAATAGCT   79 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~--~~----~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id   79 (248)
                      .++|.|.|+ |-+|+.++..|+..|++|++++++......  ..    +..+.............+.-..++..+++++|
T Consensus         7 i~~VaVIGa-G~MG~giA~~~a~aG~~V~l~D~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~l~~av~~aD   85 (321)
T PRK07066          7 IKTFAAIGS-GVIGSGWVARALAHGLDVVAWDPAPGAEAALRANVANAWPALERQGLAPGASPARLRFVATIEACVADAD   85 (321)
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCChhhHHhhceecCCHHHHhcCCC
Confidence            378888875 889999999999999999999998642211  11    11111110000000011121224667778999


Q ss_pred             EEEEcc
Q 025755           80 GVFHVA   85 (248)
Q Consensus        80 ~vi~~a   85 (248)
                      +||-+.
T Consensus        86 lViEav   91 (321)
T PRK07066         86 FIQESA   91 (321)
T ss_pred             EEEECC
Confidence            999875

>TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms)

Probab=96.16  E-value=0.013  Score=49.92  Aligned_cols=27  Identities=22%  Similarity=0.420  Sum_probs=23.8

Q ss_pred             EEEEEcCccHHHHHHHHHHHHCCCeEE
Q 025755            8 RVCVTGAGGYIASWLVKYLLLKGYMVH   34 (248)
Q Consensus         8 ~vlVtG~~g~iG~~~~~~l~~~g~~V~   34 (248)
                      +|.|.||+|.+|.++++.|.+++|.++
T Consensus         1 ~VaIvGAtG~vG~eLi~lL~~~~hp~~   27 (339)
T TIGR01296         1 NVAIVGATGAVGQEMLKILEERNFPID   27 (339)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhCCCChh
Confidence            589999999999999999999887644

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978.

>PRK07574 formate dehydrogenase; Provisional

Probab=96.15  E-value=0.011  Score=51.16  Aligned_cols=68  Identities=19%  Similarity=0.070  Sum_probs=47.9

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEE
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFH   83 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~   83 (248)
                      +.+|+|.|.|- |.||+.+++.|...|++|+.++|+....  .....            .++.-..+++.+++..|+|+.
T Consensus       190 L~gktVGIvG~-G~IG~~vA~~l~~fG~~V~~~dr~~~~~--~~~~~------------~g~~~~~~l~ell~~aDvV~l  254 (385)
T PRK07574        190 LEGMTVGIVGA-GRIGLAVLRRLKPFDVKLHYTDRHRLPE--EVEQE------------LGLTYHVSFDSLVSVCDVVTI  254 (385)
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCCCCch--hhHhh------------cCceecCCHHHHhhcCCEEEE
Confidence            68899999987 6699999999999999999999875211  11000            011112346777888999887


Q ss_pred             ccc
Q 025755           84 VAC   86 (248)
Q Consensus        84 ~ag   86 (248)
                      +.-
T Consensus       255 ~lP  257 (385)
T PRK07574        255 HCP  257 (385)
T ss_pred             cCC
Confidence            764

>PRK14182 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.07  E-value=0.022  Score=47.01  Aligned_cols=56  Identities=13%  Similarity=0.070  Sum_probs=45.6

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEE
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFH   83 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~   83 (248)
                      ++||+++|.|.+.-+|+-++..|++++++|+++....                            ..+....+..|+||.
T Consensus       155 l~Gk~vvViGrS~iVGkPla~lL~~~~AtVtichs~T----------------------------~nl~~~~~~ADIvI~  206 (282)
T PRK14182        155 PKGKRALVVGRSNIVGKPMAMMLLERHATVTIAHSRT----------------------------ADLAGEVGRADILVA  206 (282)
T ss_pred             CCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCC----------------------------CCHHHHHhhCCEEEE
Confidence            7899999999999999999999999999999864322                            124455667899998


Q ss_pred             cccc
Q 025755           84 VACP   87 (248)
Q Consensus        84 ~ag~   87 (248)
                      .+|.
T Consensus       207 AvGk  210 (282)
T PRK14182        207 AIGK  210 (282)
T ss_pred             ecCC
Confidence            8875

>PRK07502 cyclohexadienyl dehydrogenase; Validated

Probab=96.07  E-value=0.021  Score=48.03  Aligned_cols=74  Identities=23%  Similarity=0.200  Sum_probs=48.3

Q ss_pred             CCCCCCcEEEEEcCccHHHHHHHHHHHHCCC--eEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCC
Q 025755            1 MSGEDKERVCVTGAGGYIASWLVKYLLLKGY--MVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGC   78 (248)
Q Consensus         1 m~~l~~k~vlVtG~~g~iG~~~~~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~i   78 (248)
                      |+....++|.|.| .|.+|..++..|.+.|+  +|++++|+....  ......   . -..    ...  .+....++++
T Consensus         1 ~~~~~~~~I~IIG-~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~--~~a~~~---g-~~~----~~~--~~~~~~~~~a   67 (307)
T PRK07502          1 MSAPLFDRVALIG-IGLIGSSLARAIRRLGLAGEIVGADRSAETR--ARAREL---G-LGD----RVT--TSAAEAVKGA   67 (307)
T ss_pred             CCccCCcEEEEEe-eCHHHHHHHHHHHhcCCCcEEEEEECCHHHH--HHHHhC---C-CCc----eec--CCHHHHhcCC
Confidence            6666668999997 88999999999999885  899998875321  111111   1 000    011  1233456788


Q ss_pred             CEEEEcccc
Q 025755           79 TGVFHVACP   87 (248)
Q Consensus        79 d~vi~~ag~   87 (248)
                      |+||.+...
T Consensus        68 DvViiavp~   76 (307)
T PRK07502         68 DLVILCVPV   76 (307)
T ss_pred             CEEEECCCH
Confidence            999988753

>PLN02516 methylenetetrahydrofolate dehydrogenase (NADP+)

Probab=96.06  E-value=0.022  Score=47.34  Aligned_cols=57  Identities=12%  Similarity=-0.017  Sum_probs=46.3

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEE
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVF   82 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi   82 (248)
                      ++.||+++|.|-+.-+|+=++..|+++|++|+++....                            .+++...++.|+||
T Consensus       164 ~l~Gk~vvVIGRS~iVGkPla~lL~~~~ATVtvchs~T----------------------------~nl~~~~~~ADIvv  215 (299)
T PLN02516        164 PIKGKKAVVVGRSNIVGLPVSLLLLKADATVTVVHSRT----------------------------PDPESIVREADIVI  215 (299)
T ss_pred             CCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCC----------------------------CCHHHHHhhCCEEE
Confidence            37899999999999999999999999999999874321                            12455666789999


Q ss_pred             Ecccc
Q 025755           83 HVACP   87 (248)
Q Consensus        83 ~~ag~   87 (248)
                      -++|.
T Consensus       216 ~AvGk  220 (299)
T PLN02516        216 AAAGQ  220 (299)
T ss_pred             EcCCC
Confidence            88875

>PRK06249 2-dehydropantoate 2-reductase; Provisional

Probab=96.06  E-value=0.019  Score=48.42  Aligned_cols=38  Identities=24%  Similarity=0.371  Sum_probs=32.1

Q ss_pred             CCCCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCC
Q 025755            1 MSGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDP   40 (248)
Q Consensus         1 m~~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~   40 (248)
                      |+ .+.++|+|. |+|.||..++..|.+.|++|+++.|+.
T Consensus         1 ~~-~~~m~I~Ii-G~GaiG~~lA~~L~~~g~~V~~~~r~~   38 (313)
T PRK06249          1 MD-SETPRIGII-GTGAIGGFYGAMLARAGFDVHFLLRSD   38 (313)
T ss_pred             CC-CcCcEEEEE-CCCHHHHHHHHHHHHCCCeEEEEEeCC
Confidence            44 455678888 567899999999999999999999975

>PTZ00075 Adenosylhomocysteinase; Provisional

Probab=96.04  E-value=0.035  Score=49.14  Aligned_cols=67  Identities=21%  Similarity=0.072  Sum_probs=46.5

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEE
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFH   83 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~   83 (248)
                      +.+|+++|.|.+ .||+.+++.|...|++|+++.+++....... .      ..+..     .   .+..+++..|+||.
T Consensus       252 LaGKtVgVIG~G-~IGr~vA~rL~a~Ga~ViV~e~dp~~a~~A~-~------~G~~~-----~---~leell~~ADIVI~  315 (476)
T PTZ00075        252 IAGKTVVVCGYG-DVGKGCAQALRGFGARVVVTEIDPICALQAA-M------EGYQV-----V---TLEDVVETADIFVT  315 (476)
T ss_pred             cCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCchhHHHHH-h------cCcee-----c---cHHHHHhcCCEEEE
Confidence            689999999966 5999999999999999999988764211110 0      11111     1   24455677888887


Q ss_pred             ccc
Q 025755           84 VAC   86 (248)
Q Consensus        84 ~ag   86 (248)
                      +.|
T Consensus       316 atG  318 (476)
T PTZ00075        316 ATG  318 (476)
T ss_pred             CCC
Confidence            765

>PRK07877 hypothetical protein; Provisional

Probab=96.03  E-value=0.077  Score=49.68  Aligned_cols=104  Identities=13%  Similarity=0.119  Sum_probs=66.3

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCC--CeEEEEEcCCCch---hhH--------------HhhhhcCCCCC--eEEEE
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKG--YMVHGTVRDPCDE---KNA--------------HLKKLEGASEN--LQLFK   62 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g--~~V~~~~r~~~~~---~~~--------------~~~~~~~~~~~--~~~~~   62 (248)
                      |++.+|+|.|. | +|+.++..|+..|  -++++++.+.-+.   ..+              ..+.+..-++.  +..+.
T Consensus       105 L~~~~V~IvG~-G-lGs~~a~~LaraGvvG~l~lvD~D~ve~sNLnRq~~~~~diG~~Kv~~a~~~l~~inp~i~v~~~~  182 (722)
T PRK07877        105 LGRLRIGVVGL-S-VGHAIAHTLAAEGLCGELRLADFDTLELSNLNRVPAGVFDLGVNKAVVAARRIAELDPYLPVEVFT  182 (722)
T ss_pred             HhcCCEEEEEe-c-HHHHHHHHHHHccCCCeEEEEcCCEEcccccccccCChhhcccHHHHHHHHHHHHHCCCCEEEEEe
Confidence            56789999999 6 9999999999999  3888887654211   100              01112222333  44555


Q ss_pred             ccCCCHHHHHHHhCCCCEEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEec
Q 025755           63 TDLLDYEALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSS  128 (248)
Q Consensus        63 ~Di~d~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS  128 (248)
                      ..++ .+.+..+++++|+||.|.=                 |+..-..+.++|.+.+. .+|+-++
T Consensus       183 ~~i~-~~n~~~~l~~~DlVvD~~D-----------------~~~~R~~ln~~a~~~~i-P~i~~~~  229 (722)
T PRK07877        183 DGLT-EDNVDAFLDGLDVVVEECD-----------------SLDVKVLLREAARARRI-PVLMATS  229 (722)
T ss_pred             ccCC-HHHHHHHhcCCCEEEECCC-----------------CHHHHHHHHHHHHHcCC-CEEEEcC
Confidence            5555 5778888899999997761                 22223345567777764 5666554

>PRK08328 hypothetical protein; Provisional

Probab=96.01  E-value=0.051  Score=43.77  Aligned_cols=105  Identities=18%  Similarity=0.118  Sum_probs=61.8

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCC-eEEEEEcCCCchhh------------------HH-hhhhcCCCCC--eEEE
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGY-MVHGTVRDPCDEKN------------------AH-LKKLEGASEN--LQLF   61 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~------------------~~-~~~~~~~~~~--~~~~   61 (248)
                      +++++|+|.|++ |+|+++++.|+..|. ++++++.+.-+...                  .. .+.+....++  +..+
T Consensus        25 L~~~~VlIiG~G-GlGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~~k~~~a~~~l~~~np~v~v~~~  103 (231)
T PRK08328         25 LKKAKVAVVGVG-GLGSPVAYYLAAAGVGRILLIDEQTPELSNLNRQILHWEEDLGKNPKPLSAKWKLERFNSDIKIETF  103 (231)
T ss_pred             HhCCcEEEECCC-HHHHHHHHHHHHcCCCEEEEEcCCccChhhhccccccChhhcCchHHHHHHHHHHHHhCCCCEEEEE
Confidence            567889999765 699999999999995 68888765421100                  00 0111222233  3333


Q ss_pred             EccCCCHHHHHHHhCCCCEEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEec
Q 025755           62 KTDLLDYEALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSS  128 (248)
Q Consensus        62 ~~Di~d~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS  128 (248)
                      ...+ +.+.+..++++.|+||.+.--                 ...-..+.++|++.+. .+|+.+.
T Consensus       104 ~~~~-~~~~~~~~l~~~D~Vid~~d~-----------------~~~r~~l~~~~~~~~i-p~i~g~~  151 (231)
T PRK08328        104 VGRL-SEENIDEVLKGVDVIVDCLDN-----------------FETRYLLDDYAHKKGI-PLVHGAV  151 (231)
T ss_pred             eccC-CHHHHHHHHhcCCEEEECCCC-----------------HHHHHHHHHHHHHcCC-CEEEEee
Confidence            4444 345566777888888876521                 1222345566777764 6666555

>PRK14193 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.98  E-value=0.023  Score=46.90  Aligned_cols=57  Identities=18%  Similarity=0.035  Sum_probs=45.6

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHH--CCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEE
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLL--KGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGV   81 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~--~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~v   81 (248)
                      +.||+++|.|.+..+|+=++..|++  ++++|+++....                            .++....++.|+|
T Consensus       156 l~Gk~vvViGrS~~VGkPla~lL~~~~~~atVtvchs~T----------------------------~~l~~~~k~ADIv  207 (284)
T PRK14193        156 LAGAHVVVIGRGVTVGRPIGLLLTRRSENATVTLCHTGT----------------------------RDLAAHTRRADII  207 (284)
T ss_pred             CCCCEEEEECCCCcchHHHHHHHhhccCCCEEEEeCCCC----------------------------CCHHHHHHhCCEE
Confidence            7899999999999999999999998  789998764321                            1255566678999


Q ss_pred             EEccccC
Q 025755           82 FHVACPV   88 (248)
Q Consensus        82 i~~ag~~   88 (248)
                      |-.+|..
T Consensus       208 V~AvGkp  214 (284)
T PRK14193        208 VAAAGVA  214 (284)
T ss_pred             EEecCCc
Confidence            8888754

>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A

Probab=95.98  E-value=0.016  Score=37.47  Aligned_cols=33  Identities=18%  Similarity=0.085  Sum_probs=22.5

Q ss_pred             cEEEEEcCccHHHHH--HHHHHHHCCCeEEEEEcCC
Q 025755            7 ERVCVTGAGGYIASW--LVKYLLLKGYMVHGTVRDP   40 (248)
Q Consensus         7 k~vlVtG~~g~iG~~--~~~~l~~~g~~V~~~~r~~   40 (248)
                      |+|||+|+++|.|.+  ++-.+ ..|.+.+.+.+.+
T Consensus        40 K~VLViGaStGyGLAsRIa~aF-g~gA~TiGV~fEk   74 (78)
T PF12242_consen   40 KKVLVIGASTGYGLASRIAAAF-GAGADTIGVSFEK   74 (78)
T ss_dssp             SEEEEES-SSHHHHHHHHHHHH-CC--EEEEEE---
T ss_pred             ceEEEEecCCcccHHHHHHHHh-cCCCCEEEEeecc
Confidence            899999999999998  55554 6678888887765

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=95.97  E-value=0.0067  Score=43.99  Aligned_cols=34  Identities=29%  Similarity=0.475  Sum_probs=27.7

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCCeEEEEE-cCC
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGYMVHGTV-RDP   40 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~-r~~   40 (248)
                      ..+|-|.|+ |.+|.++++.|.+.|+.|..+. |+.
T Consensus        10 ~l~I~iIGa-GrVG~~La~aL~~ag~~v~~v~srs~   44 (127)
T PF10727_consen   10 RLKIGIIGA-GRVGTALARALARAGHEVVGVYSRSP   44 (127)
T ss_dssp             --EEEEECT-SCCCCHHHHHHHHTTSEEEEESSCHH
T ss_pred             ccEEEEECC-CHHHHHHHHHHHHCCCeEEEEEeCCc
Confidence            468999998 7899999999999999998764 443

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>COG0289 DapB Dihydrodipicolinate reductase [Amino acid transport and metabolism]

Probab=95.96  E-value=0.13  Score=41.72  Aligned_cols=35  Identities=23%  Similarity=0.232  Sum_probs=27.9

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCC-CeEE-EEEcCC
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKG-YMVH-GTVRDP   40 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g-~~V~-~~~r~~   40 (248)
                      +++|.|.|++|.+|+.+++.+.+.. .++. +++|..
T Consensus         2 ~iki~V~Ga~GRMG~~ii~~v~~~~~~~L~aa~~~~~   38 (266)
T COG0289           2 MIKVAVAGASGRMGRTLIRAVLEAPDLELVAAFDRPG   38 (266)
T ss_pred             CceEEEEcCCChHHHHHHHHHhcCCCceEEEEEecCC
Confidence            4689999999999999999998865 5544 445554

>TIGR01771 L-LDH-NAD L-lactate dehydrogenase

Probab=95.95  E-value=0.12  Score=43.24  Aligned_cols=163  Identities=13%  Similarity=0.034  Sum_probs=92.0

Q ss_pred             EcCccHHHHHHHHHHHHCCC--eEEEEEcCCCchhhHH--hhhhcCC-CCCeEEEEccCCCHHHHHHHhCCCCEEEEccc
Q 025755           12 TGAGGYIASWLVKYLLLKGY--MVHGTVRDPCDEKNAH--LKKLEGA-SENLQLFKTDLLDYEALCAATAGCTGVFHVAC   86 (248)
Q Consensus        12 tG~~g~iG~~~~~~l~~~g~--~V~~~~r~~~~~~~~~--~~~~~~~-~~~~~~~~~Di~d~~~~~~~~~~id~vi~~ag   86 (248)
                      .| +|.||..++..|+..+.  ++.+++.+.+...-..  +...... ..++.+..   .|.    ..++++|+||-.||
T Consensus         2 IG-aG~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~i~~---~~~----~~~~daDivVitag   73 (299)
T TIGR01771         2 IG-AGNVGSSTAFALLNQGIADEIVLIDINKDKAEGEAMDLQHAASFLPTPKKIRS---GDY----SDCKDADLVVITAG   73 (299)
T ss_pred             CC-cCHHHHHHHHHHHhcCCCCEEEEEeCCCChhhHHHHHHHHhhcccCCCeEEec---CCH----HHHCCCCEEEECCC
Confidence            45 59999999999998874  6889998664222221  1111111 12232221   222    45678999999999


Q ss_pred             cCCCCCCCCccccchhhhHHHHHHHHHHHHhcCC-CEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccccchHHH-
Q 025755           87 PVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKV-KRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCL-  164 (248)
Q Consensus        87 ~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~-~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~-  164 (248)
                      ......  .+-.+.++.|..-.+.+.+.+.+.+. ..+|.+|-........-       -......+      ....|. 
T Consensus        74 ~~rk~g--~~R~dll~~N~~i~~~~~~~i~~~~p~~~vivvsNP~d~~t~~~-------~~~sg~p~------~~viG~g  138 (299)
T TIGR01771        74 APQKPG--ETRLELVGRNVRIMKSIVPEVVKSGFDGIFLVATNPVDILTYVA-------WKLSGFPK------NRVIGSG  138 (299)
T ss_pred             CCCCCC--CCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHH-------HHHhCCCH------HHEEecc
Confidence            754322  22257889999999999999988754 45666664332111000       00000000      000222 


Q ss_pred             HHHHHHHHHHHHHHhCCccEEEEccCeeecCCCC
Q 025755          165 AKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQ  198 (248)
Q Consensus       165 sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~  198 (248)
                      +..-+-++...++++.+++...|+. ++.|.+..
T Consensus       139 t~LDs~R~~~~la~~l~v~~~~V~~-~v~GeHG~  171 (299)
T TIGR01771       139 TVLDTARLRYLLAEKLGVDPQSVHA-YIIGEHGD  171 (299)
T ss_pred             chHHHHHHHHHHHHHhCcCcCeEEE-EEEecCCC
Confidence            1122455666666766777777774 68887643

This model represents the NAD-dependent L-lactate dehydrogenases from bacteria and eukaryotes. This enzyme function as as the final step in anaerobic glycolysis. Although lactate dehydrogenases have in some cases been mistaken for malate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of malate dehydrogenases.

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=95.92  E-value=0.022  Score=48.72  Aligned_cols=36  Identities=22%  Similarity=0.343  Sum_probs=32.0

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCC
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDP   40 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~   40 (248)
                      .+.+++|+|++|++|..+++.+...|++|++++++.
T Consensus       158 ~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~  193 (348)
T PLN03154        158 KGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSS  193 (348)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCH
Confidence            478999999999999999998888999998887765

>PLN02616 tetrahydrofolate dehydrogenase/cyclohydrolase, putative

Probab=95.92  E-value=0.024  Score=48.22  Aligned_cols=58  Identities=10%  Similarity=-0.044  Sum_probs=45.9

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEE
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVF   82 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi   82 (248)
                      +++||+++|.|-+.-+|+=++..|++++++|+++....                            .++....++.|+||
T Consensus       228 ~l~GK~vvVIGRS~iVGkPLa~LL~~~~ATVTicHs~T----------------------------~nl~~~~r~ADIVI  279 (364)
T PLN02616        228 EIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT----------------------------KNPEEITREADIII  279 (364)
T ss_pred             CCCCCEEEEECCCccccHHHHHHHHHCCCeEEEeCCCC----------------------------CCHHHHHhhCCEEE
Confidence            37899999999999999999999999999999874322                            12445556778888


Q ss_pred             EccccC
Q 025755           83 HVACPV   88 (248)
Q Consensus        83 ~~ag~~   88 (248)
                      -.+|..
T Consensus       280 sAvGkp  285 (364)
T PLN02616        280 SAVGQP  285 (364)
T ss_pred             EcCCCc
Confidence            877754

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=95.91  E-value=0.05  Score=45.35  Aligned_cols=37  Identities=19%  Similarity=0.111  Sum_probs=33.1

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCC
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPC   41 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~   41 (248)
                      .+++++|+|++|++|..+++.+...|++|+++.++..
T Consensus       139 ~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~  175 (325)
T TIGR02824       139 AGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDE  175 (325)
T ss_pred             CCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHH
Confidence            4689999999999999999999999999998887653

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>PRK08223 hypothetical protein; Validated

Probab=95.90  E-value=0.044  Score=45.37  Aligned_cols=107  Identities=14%  Similarity=0.088  Sum_probs=61.4

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCC-eEEEEEcCCCchhh---H---------------HhhhhcCCCCCe--EEEE
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGY-MVHGTVRDPCDEKN---A---------------HLKKLEGASENL--QLFK   62 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~---~---------------~~~~~~~~~~~~--~~~~   62 (248)
                      |++.+|+|.|++ |+|+.+++.|+..|. ++++++.+.-+...   +               ..+.+..-++.+  ..+.
T Consensus        25 L~~s~VlIvG~G-GLGs~va~~LA~aGVG~i~lvD~D~Ve~SNLnRQ~l~~~~diG~~Kve~a~~~l~~iNP~v~V~~~~  103 (287)
T PRK08223         25 LRNSRVAIAGLG-GVGGIHLLTLARLGIGKFTIADFDVFELRNFNRQAGAMMSTLGRPKAEVLAEMVRDINPELEIRAFP  103 (287)
T ss_pred             HhcCCEEEECCC-HHHHHHHHHHHHhCCCeEEEEeCCCcchhccccccCcChhHCCCcHHHHHHHHHHHHCCCCEEEEEe
Confidence            567899999765 699999999999995 77777765421110   0               011112223333  3333


Q ss_pred             ccCCCHHHHHHHhCCCCEEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEec
Q 025755           63 TDLLDYEALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSS  128 (248)
Q Consensus        63 ~Di~d~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS  128 (248)
                      ..++ .+.+..++++.|+||.+.-         .      .++..-..+.++|.+.+. .+|+-+.
T Consensus       104 ~~l~-~~n~~~ll~~~DlVvD~~D---------~------~~~~~r~~ln~~c~~~~i-P~V~~~~  152 (287)
T PRK08223        104 EGIG-KENADAFLDGVDVYVDGLD---------F------FEFDARRLVFAACQQRGI-PALTAAP  152 (287)
T ss_pred             cccC-ccCHHHHHhCCCEEEECCC---------C------CcHHHHHHHHHHHHHcCC-CEEEEec
Confidence            4443 3445667778888874431         0      012223456677787763 6666543

>PRK10669 putative cation:proton antiport protein; Provisional

Probab=95.89  E-value=0.027  Score=51.49  Aligned_cols=70  Identities=14%  Similarity=0.114  Sum_probs=51.2

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHh-CCCCEEEEc
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAAT-AGCTGVFHV   84 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~-~~id~vi~~   84 (248)
                      .+++|.|. |.+|++++++|.++|++|++++.+++.  .+..+     ..+...+.+|.+|++.++++- +++|.++-+
T Consensus       418 ~hiiI~G~-G~~G~~la~~L~~~g~~vvvId~d~~~--~~~~~-----~~g~~~i~GD~~~~~~L~~a~i~~a~~viv~  488 (558)
T PRK10669        418 NHALLVGY-GRVGSLLGEKLLAAGIPLVVIETSRTR--VDELR-----ERGIRAVLGNAANEEIMQLAHLDCARWLLLT  488 (558)
T ss_pred             CCEEEECC-ChHHHHHHHHHHHCCCCEEEEECCHHH--HHHHH-----HCCCeEEEcCCCCHHHHHhcCccccCEEEEE
Confidence            46677765 569999999999999999999987632  12222     136789999999999888753 466766533

>cd08230 glucose_DH Glucose dehydrogenase

Probab=95.89  E-value=0.063  Score=45.99  Aligned_cols=34  Identities=32%  Similarity=0.348  Sum_probs=30.2

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcC
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRD   39 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~   39 (248)
                      .+++|+|+|+ |++|...++.+...|++|++++|+
T Consensus       172 ~g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~  205 (355)
T cd08230         172 NPRRALVLGA-GPIGLLAALLLRLRGFEVYVLNRR  205 (355)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecC
Confidence            5789999985 999999998888889999999885

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>KOG1496 consensus Malate dehydrogenase [Energy production and conversion]

Probab=95.87  E-value=0.03  Score=44.70  Aligned_cols=172  Identities=18%  Similarity=0.073  Sum_probs=83.1

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHC---C--CeEEEEEcCCCchhhHHhhh----hcCCCCCeE-EEEccCCCHHHHHHHh
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLK---G--YMVHGTVRDPCDEKNAHLKK----LEGASENLQ-LFKTDLLDYEALCAAT   75 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~---g--~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~-~~~~Di~d~~~~~~~~   75 (248)
                      .-+|+||||+|-||.+++-++++-   |  ..+++.-.+.+ .....++.    ++.  .-+. +...+.++  +-..+|
T Consensus         4 pirVlVtGAAGqI~ysll~~ia~G~vfG~dQPiiL~lLdi~-~~~~~LegV~mELqD--~a~PlL~~Vvatt--d~~~af   78 (332)
T KOG1496|consen    4 PIRVLVTGAAGQIGYSLLPMIARGIVFGKDQPIILHLLDIP-PMMSVLEGVKMELQD--CALPLLKGVVATT--DEVEAF   78 (332)
T ss_pred             ceEEEeecccchhhHHHHHHHcCceeecCCCceEEEeeCCc-hHHHHHHHHHHHHHh--hhhhHHHhhhccc--Chhhhh
Confidence            358999999999999999998752   1  12222222211 11111111    110  0011 11223332  234667


Q ss_pred             CCCCEEEEccccCCCCCCCCccccchhhhHHHHH----HHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCc
Q 025755           76 AGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTK----NVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSD  151 (248)
Q Consensus        76 ~~id~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~----~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~  151 (248)
                      +++|+.|-..+......++.  .+++..|+.-..    .+-+++++ . -+++.++-.+.-..       ....+..|..
T Consensus        79 kdv~~ailvGa~PR~eGMER--kDll~~NvkIfk~Qg~AL~k~A~~-~-~KVlVVgNPaNTNa-------li~~k~ApsI  147 (332)
T KOG1496|consen   79 KDVDVAILVGAMPRREGMER--KDLLSANVKIFKSQGAALEKYAKP-N-VKVLVVGNPANTNA-------LILKKFAPSI  147 (332)
T ss_pred             ccCcEEEEeccccCcccchh--hhHHhhcceeehhhhHHHHHhcCC-C-ceEEEecCccccch-------hHHhhhCCCC
Confidence            88999887766544433332  345566655433    33333333 2 36666654331110       0011111111


Q ss_pred             hhhhccccchHHHHHHHHHHHHHHHHHhCCccEEEEccCeeecCCCC
Q 025755          152 EEFCKATENYYCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQ  198 (248)
Q Consensus       152 ~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~  198 (248)
                      |+     -|--+.++.--.+...+++.+.|+++..|.-=.|.|-+..
T Consensus       148 P~-----kNfs~lTRLDhNRA~~QlA~klgv~~~~VkNviIWGNHSs  189 (332)
T KOG1496|consen  148 PE-----KNFSALTRLDHNRALAQLALKLGVPVSDVKNVIIWGNHSS  189 (332)
T ss_pred             ch-----hcchhhhhhchhhHHHHHHHhhCCchhhcceeEEeccccc
Confidence            11     0113444443344444556666788888888788886543

>PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.86  E-value=0.034  Score=45.85  Aligned_cols=57  Identities=18%  Similarity=0.036  Sum_probs=48.0

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEE
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVF   82 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi   82 (248)
                      +++|++++|+|.+..+|+-++..|...|++|+++.++.                            .++.+.++++|+||
T Consensus       149 ~l~Gk~V~ViGrs~~vGrpla~lL~~~~atVtv~hs~t----------------------------~~L~~~~~~ADIvI  200 (279)
T PRK14178        149 SIAGKRAVVVGRSIDVGRPMAALLLNADATVTICHSKT----------------------------ENLKAELRQADILV  200 (279)
T ss_pred             CCCCCEEEEECCCccccHHHHHHHHhCCCeeEEEecCh----------------------------hHHHHHHhhCCEEE
Confidence            37899999999999999999999999999999876432                            34667777899999


Q ss_pred             Ecccc
Q 025755           83 HVACP   87 (248)
Q Consensus        83 ~~ag~   87 (248)
                      ...|.
T Consensus       201 ~Avgk  205 (279)
T PRK14178        201 SAAGK  205 (279)
T ss_pred             ECCCc
Confidence            88864

>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional

Probab=95.85  E-value=0.11  Score=45.70  Aligned_cols=35  Identities=23%  Similarity=0.162  Sum_probs=31.1

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCC
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPC   41 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~   41 (248)
                      +++|.|.| .|.+|..++..|+++|++|++++++..
T Consensus         3 ~~kI~VIG-lG~~G~~~A~~La~~G~~V~~~D~~~~   37 (415)
T PRK11064          3 FETISVIG-LGYIGLPTAAAFASRQKQVIGVDINQH   37 (415)
T ss_pred             ccEEEEEC-cchhhHHHHHHHHhCCCEEEEEeCCHH
Confidence            47888886 588999999999999999999999864

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=95.84  E-value=0.062  Score=44.85  Aligned_cols=77  Identities=21%  Similarity=0.163  Sum_probs=49.1

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCC-HHHHHHHhC--CCCEE
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLD-YEALCAATA--GCTGV   81 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d-~~~~~~~~~--~id~v   81 (248)
                      ++++++|+|++|++|..+++.+...|++|+.++++...  ...+...   . --.++..+..+ .+.+.....  .+|.+
T Consensus       144 ~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~--~~~~~~~---g-~~~~~~~~~~~~~~~~~~~~~~~~~d~v  217 (328)
T cd08268         144 PGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEK--RDALLAL---G-AAHVIVTDEEDLVAEVLRITGGKGVDVV  217 (328)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHH--HHHHHHc---C-CCEEEecCCccHHHHHHHHhCCCCceEE
Confidence            46799999999999999999999999999998877532  2222211   1 11222222222 122333332  58999


Q ss_pred             EEcccc
Q 025755           82 FHVACP   87 (248)
Q Consensus        82 i~~ag~   87 (248)
                      +++++.
T Consensus       218 i~~~~~  223 (328)
T cd08268         218 FDPVGG  223 (328)
T ss_pred             EECCch
Confidence            998763

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>PLN02897 tetrahydrofolate dehydrogenase/cyclohydrolase, putative

Probab=95.83  E-value=0.028  Score=47.54  Aligned_cols=59  Identities=12%  Similarity=-0.103  Sum_probs=47.0

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEE
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVF   82 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi   82 (248)
                      +++||+++|.|-+.-+|+=++..|++++++|+++.....                            ++....++.|+||
T Consensus       211 ~l~GK~vvVIGRS~iVGkPla~LL~~~~ATVTicHs~T~----------------------------nl~~~~~~ADIvI  262 (345)
T PLN02897        211 EIAGKNAVVIGRSNIVGLPMSLLLQRHDATVSTVHAFTK----------------------------DPEQITRKADIVI  262 (345)
T ss_pred             CCCCCEEEEECCCccccHHHHHHHHHCCCEEEEEcCCCC----------------------------CHHHHHhhCCEEE
Confidence            378999999999999999999999999999988753221                            1345566789999


Q ss_pred             EccccCC
Q 025755           83 HVACPVP   89 (248)
Q Consensus        83 ~~ag~~~   89 (248)
                      -.+|...
T Consensus       263 sAvGkp~  269 (345)
T PLN02897        263 AAAGIPN  269 (345)
T ss_pred             EccCCcC
Confidence            8888643

>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt

Probab=95.82  E-value=0.19  Score=40.93  Aligned_cols=73  Identities=22%  Similarity=0.180  Sum_probs=52.6

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC--CCCEEEEc
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA--GCTGVFHV   84 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~--~id~vi~~   84 (248)
                      |+|||.|||+ =|+.+++.|.+.|+ |++..-.... . ...   ...........+-+.|.+.+..+++  +++.||..
T Consensus         1 m~ILvlgGTt-E~r~la~~L~~~g~-v~~sv~t~~g-~-~~~---~~~~~~~~v~~G~lg~~~~l~~~l~~~~i~~vIDA   73 (249)
T PF02571_consen    1 MKILVLGGTT-EGRKLAERLAEAGY-VIVSVATSYG-G-ELL---KPELPGLEVRVGRLGDEEGLAEFLRENGIDAVIDA   73 (249)
T ss_pred             CEEEEEechH-HHHHHHHHHHhcCC-EEEEEEhhhh-H-hhh---ccccCCceEEECCCCCHHHHHHHHHhCCCcEEEEC
Confidence            6899999998 79999999999998 6655443321 1 111   1112456777788879999999986  68999987


Q ss_pred             cc
Q 025755           85 AC   86 (248)
Q Consensus        85 ag   86 (248)
                      .=
T Consensus        74 TH   75 (249)
T PF02571_consen   74 TH   75 (249)
T ss_pred             CC
Confidence            63

Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process

>PRK06487 glycerate dehydrogenase; Provisional

Probab=95.81  E-value=0.032  Score=47.20  Aligned_cols=62  Identities=10%  Similarity=-0.070  Sum_probs=45.5

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEE
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVF   82 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi   82 (248)
                      .+.+|++.|.|- |.||+++++.+..-|.+|++++|....             ...        ...++..+++..|+|+
T Consensus       145 ~l~gktvgIiG~-G~IG~~vA~~l~~fgm~V~~~~~~~~~-------------~~~--------~~~~l~ell~~sDiv~  202 (317)
T PRK06487        145 ELEGKTLGLLGH-GELGGAVARLAEAFGMRVLIGQLPGRP-------------ARP--------DRLPLDELLPQVDALT  202 (317)
T ss_pred             ccCCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCCCCc-------------ccc--------cccCHHHHHHhCCEEE
Confidence            378899999987 789999999999889999988775310             000        1124777778888877


Q ss_pred             Eccc
Q 025755           83 HVAC   86 (248)
Q Consensus        83 ~~ag   86 (248)
                      .+.-
T Consensus       203 l~lP  206 (317)
T PRK06487        203 LHCP  206 (317)
T ss_pred             ECCC
Confidence            6653

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=95.79  E-value=0.065  Score=44.94  Aligned_cols=77  Identities=17%  Similarity=0.183  Sum_probs=49.4

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCC-HHHHHHHhC--CCCEE
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLD-YEALCAATA--GCTGV   81 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d-~~~~~~~~~--~id~v   81 (248)
                      .+.+++|.|++|.+|..+++.+...|++|+++.++.++  ...+..+ +  .+ .++..+-.+ .+.+.++..  ++|+|
T Consensus       139 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~--~~~~~~~-g--~~-~~~~~~~~~~~~~i~~~~~~~~~d~v  212 (324)
T cd08292         139 PGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAG--VAELRAL-G--IG-PVVSTEQPGWQDKVREAAGGAPISVA  212 (324)
T ss_pred             CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHH--HHHHHhc-C--CC-EEEcCCCchHHHHHHHHhCCCCCcEE
Confidence            46899999999999999999999999999988776532  2222221 1  11 222211111 233444443  58999


Q ss_pred             EEcccc
Q 025755           82 FHVACP   87 (248)
Q Consensus        82 i~~ag~   87 (248)
                      +++.|.
T Consensus       213 ~d~~g~  218 (324)
T cd08292         213 LDSVGG  218 (324)
T ss_pred             EECCCC
Confidence            998763

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>PRK14167 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.75  E-value=0.032  Score=46.41  Aligned_cols=59  Identities=19%  Similarity=0.135  Sum_probs=46.3

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHC----CCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCC
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLK----GYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGC   78 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~----g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~i   78 (248)
                      +++||+++|.|.+..+|+=++..|+++    +++|+++. +..                           .++....++.
T Consensus       154 ~l~Gk~vvViGrS~iVGkPla~lL~~~~~~~~aTVtvch-s~T---------------------------~~l~~~~~~A  205 (297)
T PRK14167        154 DTEGADVVVVGRSDIVGKPMANLLIQKADGGNATVTVCH-SRT---------------------------DDLAAKTRRA  205 (297)
T ss_pred             CCCCCEEEEECCCcccHHHHHHHHhcCccCCCCEEEEeC-CCC---------------------------CCHHHHHhhC
Confidence            378999999999999999999999988    78988853 321                           1245566778


Q ss_pred             CEEEEccccCC
Q 025755           79 TGVFHVACPVP   89 (248)
Q Consensus        79 d~vi~~ag~~~   89 (248)
                      |+||.++|...
T Consensus       206 DIvIsAvGkp~  216 (297)
T PRK14167        206 DIVVAAAGVPE  216 (297)
T ss_pred             CEEEEccCCcC
Confidence            99998887643

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=95.74  E-value=0.065  Score=46.33  Aligned_cols=80  Identities=19%  Similarity=0.191  Sum_probs=51.0

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCC-eEEEEEcCCCch---h---------------hHHhhhhcCCCCC--eEEEE
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGY-MVHGTVRDPCDE---K---------------NAHLKKLEGASEN--LQLFK   62 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~---~---------------~~~~~~~~~~~~~--~~~~~   62 (248)
                      ++..+|+|.|+ ||+|..+++.|+..|. ++++++.+.-+.   .               ....+.+...++.  +..+.
T Consensus        39 l~~~~VliiG~-GglG~~v~~~La~~Gvg~i~ivD~D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~  117 (370)
T PRK05600         39 LHNARVLVIGA-GGLGCPAMQSLASAGVGTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEIQPDIRVNALR  117 (370)
T ss_pred             hcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCCEEccccccccccCChhHCCCHHHHHHHHHHHHHCCCCeeEEee
Confidence            56788999976 5699999999999995 888887763111   0               0111122222333  44444


Q ss_pred             ccCCCHHHHHHHhCCCCEEEEcc
Q 025755           63 TDLLDYEALCAATAGCTGVFHVA   85 (248)
Q Consensus        63 ~Di~d~~~~~~~~~~id~vi~~a   85 (248)
                      ..++ .+.+..+++++|+||.|.
T Consensus       118 ~~i~-~~~~~~~~~~~DlVid~~  139 (370)
T PRK05600        118 ERLT-AENAVELLNGVDLVLDGS  139 (370)
T ss_pred             eecC-HHHHHHHHhCCCEEEECC
Confidence            4454 455667788888888765

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=95.72  E-value=0.069  Score=45.52  Aligned_cols=36  Identities=25%  Similarity=0.282  Sum_probs=30.5

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCC-eEEEEEcCCC
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGY-MVHGTVRDPC   41 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~-~V~~~~r~~~   41 (248)
                      .+++|+|+|+ |++|...++.+...|. +|++++++.+
T Consensus       169 ~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~  205 (343)
T PRK09880        169 QGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPR  205 (343)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHH
Confidence            5789999986 9999999998888898 5888887753

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	248
2c29_D	337	Structure Of Dihydroflavonol Reductase From Vitis V		3e-36
2rh8_A	338	Structure Of Apo Anthocyanidin Reductase From Vitis		3e-29
2p4h_X	322	Crystal Structure Of Vestitone Reductase From Alfal		2e-27
1y1p_A	342	X-Ray Structure Of Aldehyde Reductase With Nadph Le		2e-11
1ujm_A	342	Crystal Structure Of Aldehyde Reductase 2 From Spor		9e-11

>pdb|2C29|D Chain D, Structure Of Dihydroflavonol Reductase From Vitis Vinifera At 1.8 A. Length = 337

Iteration: 1
 Score =  148 bits (373), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 83/203 (40%), Positives = 115/203 (56%), Gaps = 6/203 (2%)
Query: 3   GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCD-EKNAHLKKLEGASENLQLF 61
           G   E VCVTGA G+I SWLV  LL +GY V  TVRDP + +K  HL  L  A  +L L+
Sbjct: 2   GSQSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLW 61
Query: 62  KTDLLDYEALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCXXXXXX 121
           K DL D  +   A  GCTGVFHVA P+   +  +PE ++I P + G   ++ SC      
Sbjct: 62  KADLADEGSFDEAIKGCTGVFHVATPMDF-ESKDPENEVIKPTIEGMLGIMKSCAAAKTV 120
Query: 122 XXXXXSSIGAVMLNPNWPKGQVMDEECWSDEEFCKA---TENYYCLAKTIAEIQALEYAK 178
                +S  A  +N    +  V DE CWSD EFC+A   T   Y ++KT+AE  A +YAK
Sbjct: 121 RRLVFTS-SAGTVNIQEHQLPVYDESCWSDMEFCRAKKMTAWMYFVSKTLAEQAAWKYAK 179
Query: 179 RGELDIVTVCPSIVIGPMLQPTI 201
              +D +T+ P++V+GP +  ++
Sbjct: 180 ENNIDFITIIPTLVVGPFIMSSM 202

>pdb|2RH8|A Chain A, Structure Of Apo Anthocyanidin Reductase From Vitis Vinifera Length = 338

Iteration: 1
 Score =  125 bits (313), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 77/204 (37%), Positives = 115/204 (56%), Gaps = 7/204 (3%)
Query: 6   KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKN-AHLKKLEGASENLQLFKTD 64
           K+  CV G  G++AS LVK LL KGY V+ TVRDP ++K  +HL +L+    +L++F+ D
Sbjct: 9   KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQELG-DLKIFRAD 67
Query: 65  LLDYEALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCXXXXXXXXX 124
           L D  +  A  AGC  VFHVA PV      +PE  +I PA+ G  NV+ +C         
Sbjct: 68  LTDELSFEAPIAGCDFVFHVATPVHFAS-EDPENDMIKPAIQGVVNVMKACTRAKSVKRV 126
Query: 125 X-XSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATEN---YYCLAKTIAEIQALEYAKRG 180
              SS  AV +N     G V+DE+ W+D EF  + +     Y  +KT+AE  A ++A+  
Sbjct: 127 ILTSSAAAVTINQLDGTGLVVDEKNWTDIEFLTSAKPPTWGYPASKTLAEKAAWKFAEEN 186
Query: 181 ELDIVTVCPSIVIGPMLQPTINTS 204
            +D++TV P+++ G  L   + +S
Sbjct: 187 NIDLITVIPTLMAGSSLTSDVPSS 210

>pdb|2P4H|X Chain X, Crystal Structure Of Vestitone Reductase From Alfalfa (Medicago Sativa L.) Length = 322

Iteration: 1
 Score =  118 bits (296), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 68/204 (33%), Positives = 109/204 (53%), Gaps = 7/204 (3%)
Query: 6   KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVR-DPCDEKN-AHLKKLEGASENLQLFKT 63
           K RVCVTG  G++ SW++K LL  GY V+ T+R DP  +++ + L  L GASE L  F  
Sbjct: 1   KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNA 60
Query: 64  DLLDYEALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCXXXXXXXX 123
           DL + ++  AA  GC G+FH A P+    V  PE  +    V G   +L +C        
Sbjct: 61  DLSNPDSFAAAIEGCVGIFHTASPIDFA-VSEPEEIVTKRTVDGALGILKACVNSKTVKR 119
Query: 124 XXXSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENY---YCLAKTIAEIQALEYAKRG 180
              +S G+ + + N     V+DE  WSD +  ++ + +   Y ++KT+AE   LE+ ++ 
Sbjct: 120 FIYTSSGSAV-SFNGKDKDVLDESDWSDVDLLRSVKPFGWNYAVSKTLAEKAVLEFGEQN 178
Query: 181 ELDIVTVCPSIVIGPMLQPTINTS 204
            +D+VT+    ++G  + P +  S
Sbjct: 179 GIDVVTLILPFIVGRFVCPKLPDS 202

>pdb|1Y1P|A Chain A, X-Ray Structure Of Aldehyde Reductase With Nadph Length = 342

Iteration: 1
 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 63/215 (29%), Positives = 96/215 (44%), Gaps = 25/215 (11%)
Query: 9   VCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKT----D 64
           V VTGA G++AS +V+ LL  GY V GT R     K A+L+K   A    + F+T    D
Sbjct: 14  VLVTGANGFVASHVVEQLLEHGYKVRGTARSAS--KLANLQKRWDAKYPGR-FETAVVED 70
Query: 65  LLDYEALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCXX--XXXXX 122
           +L   A      G  GV H+A  V      N   +++ PA+ GT N L +          
Sbjct: 71  MLKQGAYDEVIKGAAGVAHIASVV---SFSNKYDEVVTPAIGGTLNALRAAAATPSVKRF 127
Query: 123 XXXXSSIGAVMLNPNWPKGQVMDEECWSDEEFCKA----------TENYYCLAKTIAEIQ 172
               S++ A++  PN  +G  +DE+ W+ E   KA          +   Y  +KT AE+ 
Sbjct: 128 VLTSSTVSALIPKPN-VEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELA 186
Query: 173 ALEY--AKRGELDIVTVCPSIVIGPMLQPTINTSS 205
           A ++    +    +  V P+  IG +  P   + S
Sbjct: 187 AWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGS 221

>pdb|1UJM|A Chain A, Crystal Structure Of Aldehyde Reductase 2 From Sporobolomyces Salmonicolor Aku4429 Length = 342

Iteration: 1
 Score = 63.9 bits (154), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 93/209 (44%), Gaps = 25/209 (11%)
Query: 9   VCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKT----D 64
           V VTGA G++AS +V+ LL  GY V GT R     K A+L+K   A    + F+T    D
Sbjct: 14  VLVTGANGFVASHVVEQLLEHGYKVRGTARSAS--KLANLQKRWDAKYPGR-FETAVVED 70
Query: 65  LLDYEALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCXX--XXXXX 122
            L   A      G  GV H+A  V      N   +++ PA+ GT N L +          
Sbjct: 71  XLKQGAYDEVIKGAAGVAHIASVVSFS---NKYDEVVTPAIGGTLNALRAAAATPSVKRF 127
Query: 123 XXXXSSIGAVMLNPNWPKGQVMDEECWSDEEFCKA----------TENYYCLAKTIAEIQ 172
               S++ A++  PN  +G  +DE+ W+ E   KA          +   Y  +KT AE+ 
Sbjct: 128 VLTSSTVSALIPKPN-VEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELA 186
Query: 173 ALEYAKRGE--LDIVTVCPSIVIGPMLQP 199
           A ++    +    +  V P+  IG +  P
Sbjct: 187 AWKFXDENKPHFTLNAVLPNYTIGTIFDP 215

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	248
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	1e-112
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	1e-109
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	1e-109
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	2e-88
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	4e-61
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	2e-60
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	2e-28
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	2e-27
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	2e-22
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	4e-21
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	4e-21
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	3e-20
1xq6_A	253	Unknown protein; structural genomics, protein stru	3e-19
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	4e-19
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	2e-18
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	2e-18
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	3e-17
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	6e-17
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	2e-16
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	2e-16
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	4e-16
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	1e-15
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	1e-15
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	4e-15
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	6e-15
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	1e-14
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	2e-14
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	9e-14
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	4e-13
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	6e-13
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	8e-13
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	2e-12
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	3e-12
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	3e-12
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	5e-12
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	2e-11
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	3e-11
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	7e-11
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	8e-11
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	3e-10
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	4e-10
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	1e-09
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	1e-09
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	3e-09
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	3e-09
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	7e-09
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	1e-08
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	3e-08
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	1e-07
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	1e-07
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	2e-07
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	2e-06
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	3e-06
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	5e-06
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	9e-05
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	1e-04
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	1e-04
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	3e-04
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	3e-04
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	4e-04
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	5e-04
1qzv_F	154	Plant photosystem I: subunit PSAF; photosynthesis,	6e-04
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	7e-04

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* Length = 337

 Score =  324 bits (834), Expect = e-112
 Identities = 93/219 (42%), Positives = 127/219 (57%), Gaps = 9/219 (4%)

Query: 1   MSGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCD-EKNAHLKKLEGASENLQ 59
           M  +  E VCVTGA G+I SWLV  LL +GY V  TVRDP + +K  HL  L  A  +L 
Sbjct: 1   MGSQ-SETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAETHLT 59

Query: 60  LFKTDLLDYEALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAK 119
           L+K DL D  +   A  GCTGVFHVA P+   +  +PE ++I P + G   ++ SC  AK
Sbjct: 60  LWKADLADEGSFDEAIKGCTGVFHVATPMDF-ESKDPENEVIKPTIEGMLGIMKSCAAAK 118

Query: 120 -VKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFC---KATENYYCLAKTIAEIQALE 175
            V+R+V  SS G V  N    +  V DE CWSD EFC   K T   Y ++KT+AE  A +
Sbjct: 119 TVRRLVFTSSAGTV--NIQEHQLPVYDESCWSDMEFCRAKKMTAWMYFVSKTLAEQAAWK 176

Query: 176 YAKRGELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKG 214
           YAK   +D +T+ P++V+GP +  ++  S +  L  + G
Sbjct: 177 YAKENNIDFITIIPTLVVGPFIMSSMPPSLITALSPITG 215

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} Length = 322

 Score =  317 bits (815), Expect = e-109
 Identities = 77/225 (34%), Positives = 119/225 (52%), Gaps = 9/225 (4%)

Query: 6   KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVR-DPCDEKN-AHLKKLEGASENLQLFKT 63
           K RVCVTG  G++ SW++K LL  GY V+ T+R DP  +++ + L  L GASE L  F  
Sbjct: 1   KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNA 60

Query: 64  DLLDYEALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAK-VKR 122
           DL + ++  AA  GC G+FH A P+    V  PE  +    V G   +L +CV +K VKR
Sbjct: 61  DLSNPDSFAAAIEGCVGIFHTASPIDF-AVSEPEEIVTKRTVDGALGILKACVNSKTVKR 119

Query: 123 VVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENY---YCLAKTIAEIQALEYAKR 179
            +  SS  AV  + N     V+DE  WSD +  ++ + +   Y ++KT+AE   LE+ ++
Sbjct: 120 FIYTSSGSAV--SFNGKDKDVLDESDWSDVDLLRSVKPFGWNYAVSKTLAEKAVLEFGEQ 177

Query: 180 GELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKGFFFTTPSHSY 224
             +D+VT+    ++G  + P +  S    L  + G         +
Sbjct: 178 NGIDVVTLILPFIVGRFVCPKLPDSIEKALVLVLGKKEQIGVTRF 222

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A Length = 338

 Score =  317 bits (815), Expect = e-109
 Identities = 85/214 (39%), Positives = 128/214 (59%), Gaps = 7/214 (3%)

Query: 6   KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDE-KNAHLKKLEGASENLQLFKTD 64
           K+  CV G  G++AS LVK LL KGY V+ TVRDP ++ K +HL +L+   + L++F+ D
Sbjct: 9   KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQELGD-LKIFRAD 67

Query: 65  LLDYEALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAK-VKRV 123
           L D  +  A  AGC  VFHVA PV      +PE  +I PA+ G  NV+ +C +AK VKRV
Sbjct: 68  LTDELSFEAPIAGCDFVFHVATPVHF-ASEDPENDMIKPAIQGVVNVMKACTRAKSVKRV 126

Query: 124 VVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENY---YCLAKTIAEIQALEYAKRG 180
           ++ SS  AV +N     G V+DE+ W+D EF  + +     Y  +KT+AE  A ++A+  
Sbjct: 127 ILTSSAAAVTINQLDGTGLVVDEKNWTDIEFLTSAKPPTWGYPASKTLAEKAAWKFAEEN 186

Query: 181 ELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKG 214
            +D++TV P+++ G  L   + +S  L +  + G
Sbjct: 187 NIDLITVIPTLMAGSSLTSDVPSSIGLAMSLITG 220

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A Length = 342

 Score =  264 bits (676), Expect = 2e-88
 Identities = 63/227 (27%), Positives = 97/227 (42%), Gaps = 23/227 (10%)

Query: 6   KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKL---EGASENLQLFK 62
              V VTGA G++AS +V+ LL  GY V GT R     K A+L+K    +          
Sbjct: 11  GSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSA--SKLANLQKRWDAKYPGRFETAVV 68

Query: 63  TDLLDYEALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAK-VK 121
            D+L   A      G  GV H+A  V      N   +++ PA+ GT N L +      VK
Sbjct: 69  EDMLKQGAYDEVIKGAAGVAHIASVVS---FSNKYDEVVTPAIGGTLNALRAAAATPSVK 125

Query: 122 RVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATEN----------YYCLAKTIAEI 171
           R V+ SS  + ++     +G  +DE+ W+ E   KA              Y  +KT AE+
Sbjct: 126 RFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAEL 185

Query: 172 QALEYAK--RGELDIVTVCPSIVIGPMLQPT--INTSSLLLLGFLKG 214
            A ++    +    +  V P+  IG +  P     ++S  ++    G
Sbjct: 186 AAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNG 232

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} Length = 227

 Score =  191 bits (486), Expect = 4e-61
 Identities = 43/197 (21%), Positives = 81/197 (41%), Gaps = 25/197 (12%)

Query: 4   EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKT 63
           E  +++ + GA G++ S L+   L +G+ V   VR P        +K++  +E+L++ K 
Sbjct: 2   EKVKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHP--------EKIKIENEHLKVKKA 53

Query: 64  DLLDYEALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRV 123
           D+   + +C    G   V     P       NP+  + D  +     +++   KA V R 
Sbjct: 54  DVSSLDEVCEVCKGADAVISAFNPGW----NNPD--IYDETIKVYLTIIDGVKKAGVNRF 107

Query: 124 VVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKRGELD 183
           ++V   G++ + P      +MD          +  EN     K + E       K  E+D
Sbjct: 108 LMVGGAGSLFIAPGLR---LMDS--------GEVPENILPGVKALGEFYLNFLMKEKEID 156

Query: 184 IVTVCPSIVIGPMLQPT 200
            V   P+  + P ++  
Sbjct: 157 WVFFSPAADMRPGVRTG 173

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342

 Score =  192 bits (490), Expect = 2e-60
 Identities = 46/213 (21%), Positives = 84/213 (39%), Gaps = 17/213 (7%)

Query: 8   RVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLD 67
           +  V GA G +     + +   G+ +    R       + +++L       +    ++LD
Sbjct: 15  KYAVLGATGLLGHHAARAIRAAGHDLVLIHRPS-----SQIQRLAYL--EPECRVAEMLD 67

Query: 68  YEALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVS 127
           +  L  A  G  GV   A   P    P    + +  A+  T     +C++A+V R++ V 
Sbjct: 68  HAGLERALRGLDGVIFSAGYYPSR--PRRWQEEVASALGQTNPFYAACLQARVPRILYVG 125

Query: 128 SIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKRGELDIVTV 187
           S  A+   P  P+G    E  + D     + ++ Y L K   + QA E A+ G L +V  
Sbjct: 126 SAYAM---PRHPQGLPGHEGLFYDS--LPSGKSSYVLCKWALDEQAREQARNG-LPVVIG 179

Query: 188 CPSIVIGPMLQPTINTSSLLLLGFLKGFFFTTP 220
            P +V+G +      T+  ++     G      
Sbjct: 180 IPGMVLGEL--DIGPTTGRVITAIGNGEMTHYV 210

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* Length = 267

 Score =  107 bits (269), Expect = 2e-28
 Identities = 38/192 (19%), Positives = 65/192 (33%), Gaps = 23/192 (11%)

Query: 8   RVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLD 67
           R+ VTGA G +   + + L     ++      P          L+ A  N +  + DL D
Sbjct: 5   RLLVTGAAGQLGRVMRERLAPMAEILRLADLSP----------LDPAGPNEECVQCDLAD 54

Query: 68  YEALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVS 127
             A+ A  AGC G+ H+   +    V  P  Q++   ++G  N+  +       R+V  S
Sbjct: 55  ANAVNAMVAGCDGIVHLGG-IS---VEKPFEQILQGNIIGLYNLYEAARAHGQPRIVFAS 110

Query: 128 SIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKRGELDIVTV 187
           S   +        G     E     +     +  Y ++K   E  A  Y  +   +   V
Sbjct: 111 SNHTI--------GYYPQTERL-GPDVPARPDGLYGVSKCFGENLARMYFDKFGQETALV 161

Query: 188 CPSIVIGPMLQP 199
                       
Sbjct: 162 RIGSCTPEPNNY 173

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} Length = 267

 Score =  105 bits (263), Expect = 2e-27
 Identities = 35/189 (18%), Positives = 66/189 (34%), Gaps = 23/189 (12%)

Query: 7   ERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLL 66
            R+ VTGA G + S +  +L    + V  +         AH + +            DL 
Sbjct: 3   NRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAAEAHEEIVAC----------DLA 52

Query: 67  DYEALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVV 126
           D +A+      C G+ H+        V  P   ++   ++G  N+  +       R+V  
Sbjct: 53  DAQAVHDLVKDCDGIIHLGGVS----VERPWNDILQANIIGAYNLYEAARNLGKPRIVFA 108

Query: 127 SSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKRGELDIVT 186
           SS   +   P   +          D E  +  ++ Y L+K   E  A  Y  + +++ + 
Sbjct: 109 SSNHTIGYYPRTTR---------IDTEVPRRPDSLYGLSKCFGEDLASLYYHKFDIETLN 159

Query: 187 VCPSIVIGP 195
           +        
Sbjct: 160 IRIGSCFPK 168

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} Length = 221

 Score = 90.8 bits (225), Expect = 2e-22
 Identities = 25/188 (13%), Positives = 65/188 (34%), Gaps = 28/188 (14%)

Query: 8   RVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLD 67
           ++ + GA G   S +++    +G+ V   VR+          K+    +++ + + D+ D
Sbjct: 2   KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNA--------GKITQTHKDINILQKDIFD 53

Query: 68  YEALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVS 127
                +  +    V       P            +  V    ++++        R++VV 
Sbjct: 54  LTL--SDLSDQNVVVDAYGISP---------DEAEKHVTSLDHLISVLNGTVSPRLLVVG 102

Query: 128 SIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKRGELDIVTV 187
              ++ ++       +++ +   +         YY  A+  A+      + + E     +
Sbjct: 103 GAASLQIDE--DGNTLLESKGLREAP-------YYPTARAQAKQLEHLKSHQAEFSWTYI 153

Query: 188 CPSIVIGP 195
            PS +  P
Sbjct: 154 SPSAMFEP 161

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* Length = 206

 Score = 87.0 bits (216), Expect = 4e-21
 Identities = 23/132 (17%), Positives = 42/132 (31%), Gaps = 14/132 (10%)

Query: 8   RVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLD 67
           ++ + GA G      +   +  GY V   VRD      + L           +   D+L 
Sbjct: 5   KIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDS-----SRLPSEGPR--PAHVVVGDVLQ 57

Query: 68  YEALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVS 127
              +    AG   V  +      G   +     +     G +N++ +     V +VV  +
Sbjct: 58  AADVDKTVAGQDAVIVLL-----GTRNDLSPTTVM--SEGARNIVAAMKAHGVDKVVACT 110

Query: 128 SIGAVMLNPNWP 139
           S   +      P
Sbjct: 111 SAFLLWDPTKVP 122

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* Length = 317

 Score = 88.9 bits (221), Expect = 4e-21
 Identities = 38/200 (19%), Positives = 76/200 (38%), Gaps = 22/200 (11%)

Query: 9   VCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDY 68
           + VTG+ G I + LV YL  K    +    D           ++  +  ++    D+ + 
Sbjct: 2   ILVTGSSGQIGTELVPYLAEKYGKKNVIASD----------IVQRDTGGIKFITLDVSNR 51

Query: 69  EALCAA--TAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVV 126
           + +  A        +FH+A  +      +P +      + GT N+L +  + +V++VV+ 
Sbjct: 52  DEIDRAVEKYSIDAIFHLAGILSAKGEKDPALA-YKVNMNGTYNILEAAKQHRVEKVVIP 110

Query: 127 SSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKRGELDIVT 186
           S+IG         K                     + + K  AE+    Y ++  LD+ +
Sbjct: 111 STIGVFGPETPKNK---------VPSITITRPRTMFGVTKIAAELLGQYYYEKFGLDVRS 161

Query: 187 VCPSIVIGPMLQPTINTSSL 206
           +    +I    +PT  T+  
Sbjct: 162 LRYPGIISYKAEPTAGTTDY 181

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} Length = 219

 Score = 84.7 bits (210), Expect = 3e-20
 Identities = 34/184 (18%), Positives = 67/184 (36%), Gaps = 35/184 (19%)

Query: 8   RVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDL-L 66
           ++ + G+ G +   L+K L    Y ++   R         + +       ++    D+  
Sbjct: 2   KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKV-----EQVPQYNN----VKAVHFDVDW 52

Query: 67  DYEALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVV 126
             E +     G   + +V+     G      ++ +D  + G   ++ +  KA+VKR +++
Sbjct: 53  TPEEMAKQLHGMDAIINVS-----GSGGKSLLK-VD--LYGAVKLMQAAEKAEVKRFILL 104

Query: 127 SSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKRGELDIVT 186
           S+I +  L P    G   D                Y +AK  A+   L   K   LD   
Sbjct: 105 STIFS--LQPEKWIGAGFDA------------LKDYYIAKHFAD-LYL--TKETNLDYTI 147

Query: 187 VCPS 190
           + P 
Sbjct: 148 IQPG 151

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* Length = 253

 Score = 83.0 bits (205), Expect = 3e-19
 Identities = 32/142 (22%), Positives = 51/142 (35%), Gaps = 23/142 (16%)

Query: 5   DKERVCVTGAGGYIASWLVKYLLLKG--YMVHGTVRDPCDEKNAHLKKLEGASENLQLFK 62
           +   V VTGA G     + K L      ++  G VR          +  E       +F 
Sbjct: 3   NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSA--------QGKEKIGGEADVFI 54

Query: 63  TDLLDYEALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAV-------------VGTK 109
            D+ D +++  A  G   +  +   VP  K      +   P               +G K
Sbjct: 55  GDITDADSINPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQK 114

Query: 110 NVLNSCVKAKVKRVVVVSSIGA 131
           N +++   A VK +VVV S+G 
Sbjct: 115 NQIDAAKVAGVKHIVVVGSMGG 136

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} Length = 236

 Score = 82.4 bits (204), Expect = 4e-19
 Identities = 46/183 (25%), Positives = 70/183 (38%), Gaps = 34/183 (18%)

Query: 8   RVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLD 67
           RV V GA G +A +L+  L  KG+     VR+   E+   L++  GAS+   +   +L +
Sbjct: 23  RVLVVGANGKVARYLLSELKNKGHEPVAMVRNE--EQGPELRER-GASD---IVVANLEE 76

Query: 68  YEALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVS 127
                 A A    V   A   P          LID  + G    +    K  +KR ++VS
Sbjct: 77  --DFSHAFASIDAVVFAAGSGPHTGADKTI--LID--LWGAIKTIQEAEKRGIKRFIMVS 130

Query: 128 SIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKRGELDIVTV 187
           S+G                    D +       +Y +AK +A+    +  KR  LD   V
Sbjct: 131 SVGT------------------VDPDQGPMNMRHYLVAKRLAD----DELKRSSLDYTIV 168

Query: 188 CPS 190
            P 
Sbjct: 169 RPG 171

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* Length = 352

 Score = 82.3 bits (204), Expect = 2e-18
 Identities = 39/197 (19%), Positives = 71/197 (36%), Gaps = 20/197 (10%)

Query: 6   KERVCVTGAGGYIASWLVKYLLLKGYMVHG-----TVRDPCDEKNAHLKKLEGASENLQL 60
            +   +TG  G+I S L++ LL     V G     T     +         E    N + 
Sbjct: 27  PKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQR-NLDEVRSLVSEKQWSNFKF 85

Query: 61  FKTDLLDYEALCAATAGCTGVFHVACPVPVGK-VPNPEVQLIDPAVVGTKNVLNSCVKAK 119
            + D+ + +    A AG   V H A    V + + +P +      + G  N+L +   AK
Sbjct: 86  IQGDIRNLDDCNNACAGVDYVLHQAALGSVPRSINDP-ITSNATNIDGFLNMLIAARDAK 144

Query: 120 VKRVVVVSSIGAVM-LNPNWPKGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAK 178
           V+     +S  +    +P  PK           E+      + Y + K + E+ A  +++
Sbjct: 145 VQSFTYAAS-SSTYGDHPGLPK----------VEDTIGKPLSPYAVTKYVNELYADVFSR 193

Query: 179 RGELDIVTVCPSIVIGP 195
                 + +    V G 
Sbjct: 194 CYGFSTIGLRYFNVFGR 210

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* Length = 379

 Score = 82.0 bits (203), Expect = 2e-18
 Identities = 36/192 (18%), Positives = 74/192 (38%), Gaps = 20/192 (10%)

Query: 1   MSGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKN-AHLKKLEGASENLQ 59
              E+  ++ +TGAGG+IAS + + L  +G+ V        D K   H+ +     E   
Sbjct: 25  WPSENL-KISITGAGGFIASHIARRLKHEGHYVIA-----SDWKKNEHMTEDMFCDEFHL 78

Query: 60  LFKTDLLDYEALCAATAGCTGVFHVACPV-PVGKVPNPEVQLIDPAVVGTKNVLNSCVKA 118
           +   DL   E     T G   VF++A  +  +G + +    ++    + + N++ +    
Sbjct: 79  V---DLRVMENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARIN 135

Query: 119 KVKRVVVVSSIGAVMLNPNWPKGQVMD---EECWSDEEFCKATENYYCLAKTIAEIQALE 175
            +KR    SS         +P+ + ++         + +    ++ + L K   E     
Sbjct: 136 GIKRFFYASSACI------YPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLATEELCKH 189

Query: 176 YAKRGELDIVTV 187
           Y K   ++    
Sbjct: 190 YNKDFGIECRIG 201

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} Length = 311

 Score = 78.4 bits (194), Expect = 3e-17
 Identities = 29/193 (15%), Positives = 69/193 (35%), Gaps = 35/193 (18%)

Query: 8   RVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLD 67
           ++ VTG  G++  ++V+ +   G                 L +  G ++ +  ++  + D
Sbjct: 4   KIAVTGGTGFLGQYVVESIKNDGNTPII------------LTRSIG-NKAINDYEYRVSD 50

Query: 68  Y--EALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPA--VVGTKNVLNSCVKAKVKRV 123
           Y  E L         V H+A              + +     + T+N+ ++C +  +  +
Sbjct: 51  YTLEDLINQLNDVDAVVHLAA---TRGSQGK---ISEFHDNEILTQNLYDACYENNISNI 104

Query: 124 VVVSSIGAVM-LNPNWPKGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKRGEL 182
           V  S+  +      + P           +E+     +  Y ++K   E     Y+++  L
Sbjct: 105 VYAST-ISAYSDETSLPW----------NEKELPLPDLMYGVSKLACEHIGNIYSRKKGL 153

Query: 183 DIVTVCPSIVIGP 195
            I  +  + + G 
Sbjct: 154 CIKNLRFAHLYGF 166

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} Length = 236

 Score = 76.4 bits (188), Expect = 6e-17
 Identities = 29/125 (23%), Positives = 46/125 (36%), Gaps = 22/125 (17%)

Query: 8   RVCVTGAGGYIASWLVKYLLLK-GYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLL 66
            V + GAGG IA  ++  L  K         R P     A + K      N Q+   D+L
Sbjct: 25  NVLILGAGGQIARHVINQLADKQTIKQTLFARQP-----AKIHKPY--PTNSQIIMGDVL 77

Query: 67  DYEALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVV 126
           ++ AL  A  G   V+                   +   +   +V+ +     VKR++ V
Sbjct: 78  NHAALKQAMQGQDIVYANLTG--------------EDLDIQANSVIAAMKACDVKRLIFV 123

Query: 127 SSIGA 131
            S+G 
Sbjct: 124 LSLGI 128

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* Length = 364

 Score = 76.7 bits (188), Expect = 2e-16
 Identities = 36/208 (17%), Positives = 67/208 (32%), Gaps = 24/208 (11%)

Query: 11  VTGAGGYIASWLVKYLLLKGYM-----VHGTVRDPCDEKNAHLKKLEGASENLQLFKTDL 65
           + G  G I + L + L L         V+G  R      +            +   + D+
Sbjct: 6   IVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAWHED--------NPINYVQCDI 57

Query: 66  LDYEALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVK--AKVKRV 123
            D +   A  +  T V HV          + E +  +      +NVL++ +     +K +
Sbjct: 58  SDPDDSQAKLSPLTDVTHVF--YVTWANRSTEQENCEANSKMFRNVLDAVIPNCPNLKHI 115

Query: 124 VVVSSIGAVMLNPNWPKGQVMDEECWSDEEF--CKATENYYCLAKTIAEIQALEYAKRGE 181
            + +      + P    G++   +    E+    K    YY L   + E    E  K+  
Sbjct: 116 SLQTGR-KHYMGPFESYGKIESHDPPYTEDLPRLKYMNFYYDLEDIMLE----EVEKKEG 170

Query: 182 LDIVTVCPSIVIGPMLQPTINTSSLLLL 209
           L      P  + G      +N    L +
Sbjct: 171 LTWSVHRPGNIFGFSPYSMMNLVGTLCV 198

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} Length = 333

 Score = 76.1 bits (188), Expect = 2e-16
 Identities = 29/128 (22%), Positives = 46/128 (35%), Gaps = 10/128 (7%)

Query: 3   GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFK 62
           G   ++V +TG  G I S + + LL +G  V     D  +      + L+    NL   +
Sbjct: 18  GSHMKKVFITGICGQIGSHIAELLLERGDKV--VGID--NFATGRREHLKD-HPNLTFVE 72

Query: 63  TDLLDYEALCAATAGC--TGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKV 120
             + D+  +           V H A      K P+          VG  NV+ +  K  V
Sbjct: 73  GSIADHALVNQLIGDLQPDAVVHTAA---SYKDPDDWYNDTLTNCVGGSNVVQAAKKNNV 129

Query: 121 KRVVVVSS 128
            R V   +
Sbjct: 130 GRFVYFQT 137

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} PDB: 3icp_A* 3aw9_A* Length = 312

 Score = 75.3 bits (186), Expect = 4e-16
 Identities = 40/126 (31%), Positives = 52/126 (41%), Gaps = 12/126 (9%)

Query: 8   RVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLD 67
           R+ VTG  G+I S LV  L+  GY V   V D  +  +   + +     + +L   DL D
Sbjct: 2   RIVVTGGAGFIGSHLVDKLVELGYEV--VVVD--NLSSGRREFVN---PSAELHVRDLKD 54

Query: 68  YEALCAATAGCTGVFHVACPVPVGK-VPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVV 126
           Y     A      VFH A    V      P V   +  VV T NVL    +  V+ VV  
Sbjct: 55  YSWG--AGIKGDVVFHFAANPEVRLSTTEPIVH-FNENVVATFNVLEWARQTGVRTVVFA 111

Query: 127 SSIGAV 132
           SS   V
Sbjct: 112 SS-STV 116

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* Length = 352

 Score = 74.1 bits (182), Expect = 1e-15
 Identities = 26/146 (17%), Positives = 48/146 (32%), Gaps = 18/146 (12%)

Query: 1   MSGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQL 60
           M+ + K  + V GA G   + L++     G+ V   V          L+ +        L
Sbjct: 1   MAQQKK-TIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNV----TL 55

Query: 61  FKTDLLDYEALC-AATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAK 119
           F+  LL+   L      G    F              E+ +        K++ ++  +A 
Sbjct: 56  FQGPLLNNVPLMDTLFEGAHLAFINTTS-----QAGDEIAI-------GKDLADAAKRAG 103

Query: 120 VKRVVVVSSIGAVMLNPNWPKGQVMD 145
             +  + SS+    L   WP   +  
Sbjct: 104 TIQHYIYSSMPDHSLYGPWPAVPMWA 129

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* Length = 351

 Score = 73.8 bits (182), Expect = 1e-15
 Identities = 27/132 (20%), Positives = 46/132 (34%), Gaps = 14/132 (10%)

Query: 6   KERVCVTGAGGYIASWLVKYLLLKGYMVHG-----TVRDPCDEKNAHLKKLEGASENLQL 60
            +   +TG  G+I S L++ LL    +V G     T     +                  
Sbjct: 25  PKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQY-NLDEVKTLVSTEQWSRFCF 83

Query: 61  FKTDLLDYEALCAATAGCTGVFHVACPVPVGKVP----NPEVQLIDPAVVGTKNVLNSCV 116
            + D+ D         G   V H A    +G VP    +P +      + G  N+L++  
Sbjct: 84  IEGDIRDLTTCEQVMKGVDHVLHQAA---LGSVPRSIVDP-ITTNATNITGFLNILHAAK 139

Query: 117 KAKVKRVVVVSS 128
            A+V+     +S
Sbjct: 140 NAQVQSFTYAAS 151

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} Length = 224

 Score = 71.2 bits (174), Expect = 4e-15
 Identities = 28/188 (14%), Positives = 49/188 (26%), Gaps = 25/188 (13%)

Query: 8   RVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLD 67
           ++ V GA G   S +V     +G+ V   VRDP            GA     +       
Sbjct: 2   KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDP-----QKAADRLGA----TVATLVKEP 52

Query: 68  YEALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVS 127
                A       V                +           ++++    +    V ++ 
Sbjct: 53  LVLTEADLDSVDAVVDALSVPWGSGRGYLHLD-------FATHLVSLLRNSDTLAVFILG 105

Query: 128 SIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKRGELDIVTV 187
           S    M  P      ++D       E   +   Y        E Q L       ++ + +
Sbjct: 106 SASLAM--PGADHPMILD-----FPESAASQPWYDGALYQYYEYQFL--QMNANVNWIGI 156

Query: 188 CPSIVIGP 195
            PS     
Sbjct: 157 SPSEAFPS 164

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} Length = 342

 Score = 72.0 bits (177), Expect = 6e-15
 Identities = 40/211 (18%), Positives = 68/211 (32%), Gaps = 27/211 (12%)

Query: 8   RVCVTGAGGYIASWLVKYLLLKGYMVHG-----TVRDPCDEKNAHLKKLEGASENLQLFK 62
            + + GA G +   L + L+  G +        T+ D         +   G S  +    
Sbjct: 16  HIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLID-----VFQPEAPAGFSGAVDARA 70

Query: 63  TDLLDYEAL-CAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVK 121
            DL           A    +FH+A  V      + +       + GT+ + ++   A  K
Sbjct: 71  ADLSAPGEAEKLVEARPDVIFHLAAIVSGEAELDFDKGY-RINLDGTRYLFDAIRIANGK 129

Query: 122 -----RVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEY 176
                RVV  SSI           G  +       +EF       Y   K I E+   +Y
Sbjct: 130 DGYKPRVVFTSSIAVF--------GAPLPYPI--PDEFHTTPLTSYGTQKAICELLLSDY 179

Query: 177 AKRGELDIVTVCPSIVIGPMLQPTINTSSLL 207
           ++RG  D + +    +     +P    S   
Sbjct: 180 SRRGFFDGIGIRLPTICIRPGKPNAAASGFF 210

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* Length = 311

 Score = 71.0 bits (175), Expect = 1e-14
 Identities = 41/130 (31%), Positives = 62/130 (47%), Gaps = 15/130 (11%)

Query: 8   RVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLD 67
           RV VTG  G+I S +V+ LL +G  V   V D     N    K E   + +  F+ DL D
Sbjct: 2   RVLVTGGAGFIGSHIVEDLLARGLEV--AVLD-----NLATGKRENVPKGVPFFRVDLRD 54

Query: 68  YEALCAATAGC--TGVFHVACPVPVGK-VPNPEVQLIDPA--VVGTKNVLNSCVKAKVKR 122
            E +  A      T V H A    V   V +P   ++D    ++G  N+L +C +  V++
Sbjct: 55  KEGVERAFREFRPTHVSHQAAQASVKVSVEDP---VLDFEVNLLGGLNLLEACRQYGVEK 111

Query: 123 VVVVSSIGAV 132
           +V  S+ GA+
Sbjct: 112 LVFASTGGAI 121

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* Length = 377

 Score = 71.2 bits (175), Expect = 2e-14
 Identities = 39/196 (19%), Positives = 70/196 (35%), Gaps = 15/196 (7%)

Query: 8   RVCVTGAGGYIASWLVKYLLLKGYMVHGTVR--DPCDEKNAHLKKLEGASENLQLFKTDL 65
            V V G  G++ S LVK LL  G      V   D  +  +A    +      ++  +T +
Sbjct: 34  NVMVVGGAGFVGSNLVKRLLELGV---NQVHVVD--NLLSAEKINVPD-HPAVRFSETSI 87

Query: 66  LDYEALCAATAGCTGVFHVACPVPVGK-VPNPEVQLIDPAVVGTKNVLNSCVKAK-VKRV 123
            D   L +       VFH+A        + +P +   +   + T  +       K +K+V
Sbjct: 88  TDDALLASLQDEYDYVFHLATYHGNQSSIHDP-LADHENNTLTTLKLYERLKHFKRLKKV 146

Query: 124 VVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKRGELD 183
           V  ++  ++              E   D       ++ Y ++K   E  ++ Y K+ +L 
Sbjct: 147 VYSAAGCSIAEKTFDDA---KATEET-DIVSLHNNDSPYSMSKIFGEFYSVYYHKQHQLP 202

Query: 184 IVTVCPSIVIGPMLQP 199
            V      V GP    
Sbjct: 203 TVRARFQNVYGPGEIL 218

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} Length = 313

 Score = 68.3 bits (168), Expect = 9e-14
 Identities = 32/126 (25%), Positives = 53/126 (42%), Gaps = 12/126 (9%)

Query: 8   RVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLD 67
            + VTG  G+I S +V  L  +   +   V D  +  + + + +    E  +L K DL  
Sbjct: 3   LIVVTGGAGFIGSHVVDKLS-ESNEI--VVID--NLSSGNEEFVN---EAARLVKADLAA 54

Query: 68  YEALCAATAGCTGVFHVACPVPVGK-VPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVV 126
            + +     G   V+H+A    V     NP+       V+ T  +L +  KA V R+V  
Sbjct: 55  -DDIKDYLKGAEEVWHIAANPDVRIGAENPDEIY-RNNVLATYRLLEAMRKAGVSRIVFT 112

Query: 127 SSIGAV 132
           S+   V
Sbjct: 113 ST-STV 117

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A Length = 299

 Score = 66.6 bits (163), Expect = 4e-13
 Identities = 27/146 (18%), Positives = 43/146 (29%), Gaps = 16/146 (10%)

Query: 1   MSGEDKERVCVTGAGGYIASWLVKYLLLKG-YMVHGTVRDPCDEKNAHLKKLEGASENLQ 59
           M   DK+ V V G  G     + + LL  G + V    R+P  +    L       +  +
Sbjct: 2   MV--DKKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKEL-----RLQGAE 54

Query: 60  LFKTDLLDYEALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAK 119
           + + D  D   +  A  G    F V            EV+         K + +   +  
Sbjct: 55  VVQGDQDDQVIMELALNGAYATFIVT-NYWESCSQEQEVKQ-------GKLLADLARRLG 106

Query: 120 VKRVVVVSSIGAVMLNPNWPKGQVMD 145
           +  VV         L          D
Sbjct: 107 LHYVVYSGLENIKKLTAGRLAAAHFD 132

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} Length = 312

 Score = 66.1 bits (162), Expect = 6e-13
 Identities = 31/197 (15%), Positives = 63/197 (31%), Gaps = 21/197 (10%)

Query: 6   KERVCVTGAGGYIASWLVKYLLLKGYMVHGT-VRDPCDEKNAHLKKLEGASENLQLFKTD 64
             ++ + GA G I + L + L      ++GT      D +  +   +     +      +
Sbjct: 2   NPKILIIGACGQIGTELTQKLR----KLYGTENVIASDIRKLNTDVVN----SGPFEVVN 53

Query: 65  LLDYEAL--CAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKR 122
            LD+  +         T ++ +A  +      NP     D  +    +VLN     K+K+
Sbjct: 54  ALDFNQIEHLVEVHKITDIYLMAALLSATAEKNPAFA-WDLNMNSLFHVLNLAKAKKIKK 112

Query: 123 VVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKRGEL 182
           +   SSI                    + +         Y ++K   E     Y     +
Sbjct: 113 IFWPSSIAVFGPTTPKEN---------TPQYTIMEPSTVYGISKQAGERWCEYYHNIYGV 163

Query: 183 DIVTVCPSIVIGPMLQP 199
           D+ ++    +I     P
Sbjct: 164 DVRSIRYPGLISWSTPP 180

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 3r14_A* Length = 221

 Score = 64.7 bits (157), Expect = 8e-13
 Identities = 25/184 (13%), Positives = 51/184 (27%), Gaps = 36/184 (19%)

Query: 8   RVCVTGAGGYIASWLVKYLLLK-GYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLL 66
            + + GA G IA  L   LL      +    R    +     + ++   E + + +    
Sbjct: 7   YITILGAAGQIAQXLTATLLTYTDMHITLYGRQL--KTRIPPEIIDH--ERVTVIEGSFQ 62

Query: 67  DYEALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVV 126
           +   L  A      VF  A                  +     +++ +  +  ++RV+ V
Sbjct: 63  NPGXLEQAVTNAEVVFVGA----------------MESGSDMASIVKALSRXNIRRVIGV 106

Query: 127 SSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKRGELDIVT 186
           S  G     P   +    D                Y   +  A        +   L+   
Sbjct: 107 SMAGLSGEFPVALEKWTFDN-----------LPISYVQGERQAR----NVLRESNLNYTI 151

Query: 187 VCPS 190
           +  +
Sbjct: 152 LRLT 155

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} Length = 321

 Score = 64.9 bits (159), Expect = 2e-12
 Identities = 33/126 (26%), Positives = 50/126 (39%), Gaps = 20/126 (15%)

Query: 8   RVCVTGAGGYIASWLVKYLLLKGYMVHGTVRD----PCDEKNAHLKKLEGASENLQLFKT 63
           R+ +TG  G+I   L + L+  G  V  TV D    P         K       L+L + 
Sbjct: 9   RILITGGAGFIGGHLARALVASGEEV--TVLDDLRVPPMIPPEGTGKFLEK-PVLELEER 65

Query: 64  DLLDYEALCAATAGCTGVFHVACPVPVGK-VPNPEVQLIDPAVVGTKNVLNSCVKAKVKR 122
           DL D             V+H+A    V +    P +  +D  V   +++L  C    V +
Sbjct: 66  DLSDVRL----------VYHLASHKSVPRSFKQP-LDYLD-NVDSGRHLLALCTSVGVPK 113

Query: 123 VVVVSS 128
           VVV S+
Sbjct: 114 VVVGST 119

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* Length = 330

 Score = 64.1 bits (157), Expect = 3e-12
 Identities = 31/131 (23%), Positives = 51/131 (38%), Gaps = 19/131 (14%)

Query: 8   RVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLD 67
           R+ +TG  G + S L+++ L +G+ +   V D  +      + L      L + +  + D
Sbjct: 22  RILITGGAGCLGSNLIEHWLPQGHEI--LVID--NFATGKREVLP-PVAGLSVIEGSVTD 76

Query: 68  YEALCAATAGC--TGVFHVACPVPVGKVP-NPEVQLIDPA---VVGTKNVLNSCVKAKVK 121
              L  A      T V H A      K P +      + A   V G+ NV  +  KA VK
Sbjct: 77  AGLLERAFDSFKPTHVVHSAA---AYKDPDDW----AEDAATNVQGSINVAKAASKAGVK 129

Query: 122 RVVVVSSIGAV 132
           R ++       
Sbjct: 130 R-LLNFQTALC 139

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} Length = 286

 Score = 64.0 bits (156), Expect = 3e-12
 Identities = 22/130 (16%), Positives = 44/130 (33%), Gaps = 19/130 (14%)

Query: 1   MSGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQL 60
           MS     ++ + G G  +   L + L  +G+ V G  R             +     +Q 
Sbjct: 1   MS---LSKILIAGCG-DLGLELARRLTAQGHEVTGLRRSA-----------QPMPAGVQT 45

Query: 61  FKTDLLDYEALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKV 120
              D+   + L +       +             +  +  ++    G +N L++   A +
Sbjct: 46  LIADVTRPDTLASIVHLRPEILVYCVAASEYSDEHYRLSYVE----GLRNTLSALEGAPL 101

Query: 121 KRVVVVSSIG 130
           + V  VSS G
Sbjct: 102 QHVFFVSSTG 111

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} Length = 372

 Score = 64.0 bits (156), Expect = 5e-12
 Identities = 38/210 (18%), Positives = 67/210 (31%), Gaps = 41/210 (19%)

Query: 6   KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDL 65
            ++V + G  G+I   L K +L           D   ++   L K     E +  F+ D+
Sbjct: 24  AKKVLILGVNGFIGHHLSKRILETTDWEV-FGMDMQTDRLGDLVK----HERMHFFEGDI 78

Query: 66  -LDYEALCAATAGCTGVFHVACPV-PVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRV 123
            ++ E +      C  +  +     P   V  P +++ +        ++ S VK   K +
Sbjct: 79  TINKEWVEYHVKKCDVILPLVAIATPATYVKQP-LRVFELDFEANLPIVRSAVKYG-KHL 136

Query: 124 VVVSSIGAVMLNPNWPKGQVMDEEC---WSDEEFCKATENY-----------YCLAKTIA 169
           V  S+                  E     +DE+F                  Y  +K + 
Sbjct: 137 VFPST-----------------SEVYGMCADEQFDPDASALTYGPINKPRWIYACSKQLM 179

Query: 170 EIQALEYAKRGELDIVTVCPSIVIGPMLQP 199
           +     Y   G L+     P   IGP L  
Sbjct: 180 DRVIWGYGMEG-LNFTLFRPFNWIGPGLDS 208

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* Length = 357

 Score = 61.9 bits (151), Expect = 2e-11
 Identities = 33/190 (17%), Positives = 59/190 (31%), Gaps = 39/190 (20%)

Query: 8   RVCVTGAGGYIASWLVKYLLLKGY--------MVHGTVRDPCDEKNAHLKKLEGASENLQ 59
            + VTG  G+I S +VK L  KG         +  G        K  +L  L  A     
Sbjct: 48  MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDG-------TKFVNLVDLNIADY--- 97

Query: 60  LFKTDLLDYEALCAATAGCTGVFHV-ACP-VPVGKVPNPEVQLIDPAVVGTKNVLNSCVK 117
           + K D L              +FH  AC              ++D     +K +L+ C++
Sbjct: 98  MDKEDFLIQIMAGEEFGDVEAIFHEGACSSTTE-WDGKY---MMDNNYQYSKELLHYCLE 153

Query: 118 AKVKRVVVVSS--IGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALE 175
            ++  +   S+   G      +             +    +   N +  +K + +    +
Sbjct: 154 REIPFLYASSAATYGG---RTSDFI----------ESREYEKPLNVFGYSKFLFDEYVRQ 200

Query: 176 YAKRGELDIV 185
                   IV
Sbjct: 201 ILPEANSQIV 210

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A Length = 345

 Score = 61.6 bits (150), Expect = 3e-11
 Identities = 24/123 (19%), Positives = 47/123 (38%), Gaps = 11/123 (8%)

Query: 8   RVCVTGAGGYIASWLVKYLLLKG-YMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDL- 65
           RV + G  G+I + L + LL +  Y V     D   +  +          +    + D+ 
Sbjct: 2   RVLILGVNGFIGNHLTERLLREDHYEV--YGLDIGSDAISRFL----NHPHFHFVEGDIS 55

Query: 66  LDYEALCAATAGCTGVFHVACPV-PVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVV 124
           +  E +      C  V  +     P+    NP +++ +        ++  CVK + KR++
Sbjct: 56  IHSEWIEYHVKKCDVVLPLVAIATPIEYTRNP-LRVFELDFEENLRIIRYCVKYR-KRII 113

Query: 125 VVS 127
             S
Sbjct: 114 FPS 116

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 Length = 310

 Score = 59.9 bits (146), Expect = 7e-11
 Identities = 33/182 (18%), Positives = 60/182 (32%), Gaps = 25/182 (13%)

Query: 9   VCVTGAGGYIASWLVKYLLLKGYM-VHGTVRDPCDEKNAH-LKKLEGASENLQLFKTDLL 66
           + VTG  G+I S +VK L  KG   +   V D  + K+      L   +    + K D L
Sbjct: 2   IIVTGGAGFIGSNIVKALNDKGITDI--LVVD--NLKDGTKFVNLVDLNIADYMDKEDFL 57

Query: 67  DYEALCAATAGCTGVFHV-ACP-VPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVV 124
                         +FH  AC              ++D     +K +L+ C++ ++    
Sbjct: 58  IQIMAGEEFGDVEAIFHEGACSSTTE-WDGKY---MMDNNYQYSKELLHYCLEREIP--F 111

Query: 125 VVSSIGAVM-LNPNWPKGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKRGELD 183
           + +S  A      +             +    +   N Y  +K + +    +        
Sbjct: 112 LYASSAATYGGRTSDFI----------ESREYEKPLNVYGYSKFLFDEYVRQILPEANSQ 161

Query: 184 IV 185
           IV
Sbjct: 162 IV 163

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} Length = 478

 Score = 60.3 bits (146), Expect = 8e-11
 Identities = 38/219 (17%), Positives = 68/219 (31%), Gaps = 36/219 (16%)

Query: 5   DKERVCVTGAGGYIASWLVKYLLLK---GYMVHGTVRDPCDEKNAH--LKKL-------- 51
           +   V +TGA G++  +LV  LL +      +   VR    +++A   L+K         
Sbjct: 72  ELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVR-AESDEDARRRLEKTFDSGDPEL 130

Query: 52  -----EGASENLQLFKTDLL---------DYEALCAATAGCTGVFHVACPVPVGKVPNPE 97
                E A++ L++   D            +  L         +   A  V       P 
Sbjct: 131 LRHFKELAADRLEVVAGDKSEPDLGLDQPMWRRLAET---VDLIVDSAAMVNA----FPY 183

Query: 98  VQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKA 157
            +L  P V GT  ++   +  K+K    VS+             +  D    S       
Sbjct: 184 HELFGPNVAGTAELIRIALTTKLKPFTYVSTADVGAAIEPSAFTEDADIRVISPTRTVDG 243

Query: 158 T-ENYYCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGP 195
                Y  +K   E+   E      L +      +++  
Sbjct: 244 GWAGGYGTSKWAGEVLLREANDLCALPVAVFRCGMILAD 282

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A Length = 369

 Score = 58.8 bits (142), Expect = 3e-10
 Identities = 27/189 (14%), Positives = 52/189 (27%), Gaps = 55/189 (29%)

Query: 8   RVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTD-LL 66
            + +TGA G++   L   L                              +  +F+     
Sbjct: 2   NIVITGAKGFVGKNLKADLTSTT--------------------------DHHIFEVHRQT 35

Query: 67  DYEALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVV 126
             E L +A      + H+A    V +  + + +     V    +VL+   +   K  +++
Sbjct: 36  KEEELESALLKADFIVHLAG---VNRPEHDK-EFSLGNVSYLDHVLDILTRNTKKPAILL 91

Query: 127 SSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKRGELDIVT 186
           SS                              +N Y  +K   E    EYA+     +  
Sbjct: 92  SS------------------------SIQATQDNPYGESKLQGEQLLREYAEEYGNTVYI 127

Query: 187 VCPSIVIGP 195
                + G 
Sbjct: 128 YRWPNLFGK 136

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} Length = 289

 Score = 57.7 bits (140), Expect = 4e-10
 Identities = 17/122 (13%), Positives = 42/122 (34%), Gaps = 18/122 (14%)

Query: 11  VTGAGGYIASWLVKYLLLKGY-MVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYE 69
           +TGA G++ + +    +       H  VR+   EK             + + + D  + E
Sbjct: 5   LTGATGHLGTHITNQAIANHIDHFHIGVRNV--EKVPDD-----WRGKVSVRQLDYFNQE 57

Query: 70  ALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSI 129
           ++  A  G   V  +  P  +        +         +N++ +  ++ V  ++ +   
Sbjct: 58  SMVEAFKGMDTVVFI--PSIIHPSFKRIPE--------VENLVYAAKQSGVAHIIFIGYY 107

Query: 130 GA 131
             
Sbjct: 108 AD 109

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* Length = 343

 Score = 56.6 bits (137), Expect = 1e-09
 Identities = 42/205 (20%), Positives = 81/205 (39%), Gaps = 33/205 (16%)

Query: 5   DKERVCVTGAGGYIASWLVKYLLLKGYMVHG-----TVRDPCDEKN-AHLKKLEGASENL 58
           D++R+ +TG  G++ S L   L++ G+ V       T R    ++N  H        EN 
Sbjct: 26  DRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGR----KRNVEHWIG----HENF 77

Query: 59  QLFKTDLLDYEALCAATAGCTGVFHVACPV-PVGKVPNPEVQLIDPAVVGTKNVLNSCVK 117
           +L   D+++   +         ++H+A P  P   + NP ++ +    +GT N+L    +
Sbjct: 78  ELINHDVVEPLYI-----EVDQIYHLASPASPPNYMYNP-IKTLKTNTIGTLNMLGLAKR 131

Query: 118 AKVKRVVVVSS---IGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAKTIAEIQAL 174
               R+++ S+    G   ++P         E+ W           Y    K +AE    
Sbjct: 132 VG-ARLLLASTSEVYGDPEVHP-------QSEDYWGHVNPIGPRACYDE-GKRVAETMCY 182

Query: 175 EYAKRGELDIVTVCPSIVIGPMLQP 199
            Y K+  +++         GP +  
Sbjct: 183 AYMKQEGVEVRVARIFNTFGPRMHM 207

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* Length = 286

 Score = 56.1 bits (136), Expect = 1e-09
 Identities = 27/123 (21%), Positives = 50/123 (40%), Gaps = 21/123 (17%)

Query: 11  VTGAGGYIASWLVKYLLLK--GYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDY 68
           +TGA G +  ++++ L+       +   VR+P   K   L     A++ + + + D  D 
Sbjct: 4   ITGATGQLGHYVIESLMKTVPASQIVAIVRNP--AKAQAL-----AAQGITVRQADYGDE 56

Query: 69  EALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSS 128
            AL +A  G   +  +       +V     Q         +NV+N+   A VK +   S 
Sbjct: 57  AALTSALQGVEKLLLI----SSSEVGQRAPQ--------HRNVINAAKAAGVKFIAYTSL 104

Query: 129 IGA 131
           + A
Sbjct: 105 LHA 107

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} Length = 362

 Score = 55.4 bits (134), Expect = 3e-09
 Identities = 35/197 (17%), Positives = 58/197 (29%), Gaps = 35/197 (17%)

Query: 5   DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRD----------PCDEKNAHLKKLEGA 54
           + + + +TG  G++ S L  +           V D                 H K L G 
Sbjct: 9   ENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGF 68

Query: 55  SENLQLFKTDLLDYEALC-AATAGCTGVFHV-ACP-VPVGKVPNPEVQLIDPAVVGTKNV 111
               ++   D+ +   L          +FH  A        + N E  ++        N+
Sbjct: 69  --KGEVIAADINNPLDLRRLEKLHFDYLFHQAAVSDTT---MLNQE-LVMKTNYQAFLNL 122

Query: 112 LNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAKTIAEI 171
           L      K K  V+ +S   V  N   P                ++ EN Y  +K   + 
Sbjct: 123 LEIARSKKAK--VIYASSAGVYGNTKAPN----------VVGKNESPENVYGFSKLCMD- 169

Query: 172 QALEYAKRGELDIVTVC 188
              E+      D V V 
Sbjct: 170 ---EFVLSHSNDNVQVG 183

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D Length = 287

 Score = 55.0 bits (133), Expect = 3e-09
 Identities = 28/123 (22%), Positives = 49/123 (39%), Gaps = 19/123 (15%)

Query: 11  VTGAGGYIASWLVKYLLLK--GYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDY 68
           VTGA G +   ++++LL K     +   VR+   EK + L     A + +++   D    
Sbjct: 5   VTGATGQLGGLVIQHLLKKVPASQIIAIVRNV--EKASTL-----ADQGVEVRHGDYNQP 57

Query: 69  EALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSS 128
           E+L  A AG + +  ++ P                 +V   NV+ +   A VK +     
Sbjct: 58  ESLQKAFAGVSKLLFISGPHYDN----------TLLIVQHANVVKAARDAGVKHIAYTGY 107

Query: 129 IGA 131
             A
Sbjct: 108 AFA 110

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* Length = 404

 Score = 54.4 bits (131), Expect = 7e-09
 Identities = 37/225 (16%), Positives = 66/225 (29%), Gaps = 25/225 (11%)

Query: 8   RVCVTGAGGYIASWLVKYLLLKGYMV----------------HGTVRDPCDEKNAHLKKL 51
           RV V G  GY       +L  K Y V                  ++       +   +  
Sbjct: 13  RVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWK 72

Query: 52  EGASENLQLFKTDLLDYEALCA--ATAGCTGVFHVACPVPVGK-VPNPE--VQLIDPAVV 106
               ++++L+  D+ D+E L     +     V H          + +    V      V+
Sbjct: 73  ALTGKSIELYVGDICDFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVI 132

Query: 107 GTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVM---DEECWSDEE-FCKATENYY 162
           GT NVL +  +   +  +V          PN    +          +D   + K   ++Y
Sbjct: 133 GTLNVLFAIKEFGEECHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFY 192

Query: 163 CLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTINTSSLL 207
            L+K           K   +    +   +V G     T     L 
Sbjct: 193 HLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELR 237

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* Length = 357

 Score = 54.1 bits (130), Expect = 1e-08
 Identities = 38/167 (22%), Positives = 58/167 (34%), Gaps = 14/167 (8%)

Query: 8   RVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLD 67
           RV VTG  G+   WL  +L   G  V G         +  L +    ++ +Q    D+ D
Sbjct: 11  RVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPS--LFETARVADGMQSEIGDIRD 68

Query: 68  YEALCAA--TAGCTGVFHVACPVPVGK-VPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVV 124
              L  +        VFH+A    V      P V+     V+GT  +L +       + V
Sbjct: 69  QNKLLESIREFQPEIVFHMAAQPLVRLSYSEP-VETYSTNVMGTVYLLEAIRHVGGVKAV 127

Query: 125 VVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAKTIAEI 171
           V  +      N  W  G   +E             + Y  +K  AE+
Sbjct: 128 VNITSDKCYDNKEWIWGYRENEAMGGY--------DPYSNSKGCAEL 166

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A Length = 242

 Score = 52.1 bits (125), Expect = 3e-08
 Identities = 28/156 (17%), Positives = 44/156 (28%), Gaps = 17/156 (10%)

Query: 8   RVCVTGAGGYIASWLVKYLLLKGYM--VHGTVRDPCDEKNAHLKKLEGASENLQLFKTDL 65
            V + GA G     L+K +L +G    V    R          K +            D 
Sbjct: 20  SVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVN-------QEVVDF 72

Query: 66  LDYEALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVV 125
              +   +A  G    F        GK        +D                  K   +
Sbjct: 73  EKLDDYASAFQGHDVGFC-CLGTTRGKAGAEGFVRVD--RDYVLKSAELAKAGGCKHFNL 129

Query: 126 VSSIGAVMLNPNWP---KGQVMDEECWSDEEFCKAT 158
           +SS GA   +       KG+V  E    + +F + +
Sbjct: 130 LSSKGADKSSNFLYLQVKGEV--EAKVEELKFDRYS 163

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* Length = 344

 Score = 50.7 bits (122), Expect = 1e-07
 Identities = 32/139 (23%), Positives = 54/139 (38%), Gaps = 23/139 (16%)

Query: 5   DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPC-------DEKNAHLKKLEGASEN 57
           D + + +TG  G      V+ +L           +         DE       +E     
Sbjct: 20  DNQTILITGGTGSFGKCFVRKVLDTT--------NAKKIIVYSRDELKQSEMAMEFNDPR 71

Query: 58  LQLFKTDLLDYEALCAATAGCTGVFHVACPVPVGKVP----NPEVQLIDPAVVGTKNVLN 113
           ++ F  D+ D E L  A  G     H A    +  VP    NP  + I   ++G  NV+N
Sbjct: 72  MRFFIGDVRDLERLNYALEGVDICIHAAA---LKHVPIAEYNPL-ECIKTNIMGASNVIN 127

Query: 114 SCVKAKVKRVVVVSSIGAV 132
           +C+K  + +V+ +S+  A 
Sbjct: 128 ACLKNAISQVIALSTDKAA 146

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 Length = 313

 Score = 50.7 bits (121), Expect = 1e-07
 Identities = 21/141 (14%), Positives = 42/141 (29%), Gaps = 14/141 (9%)

Query: 1   MSGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASE-NLQ 59
           M    K RV + G  GYI   +V   +  G+  +   R         ++ L    +   +
Sbjct: 1   MDK--KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAK 58

Query: 60  LFKTDLLDYEALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAK 119
           L +  L D++ L  A      V        +              ++    ++ +  +A 
Sbjct: 59  LIEASLDDHQRLVDALKQVDVVISALAGGVL-----------SHHILEQLKLVEAIKEAG 107

Query: 120 VKRVVVVSSIGAVMLNPNWPK 140
             +  + S  G          
Sbjct: 108 NIKRFLPSEFGMDPDIMEHAL 128

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 Length = 308

 Score = 50.3 bits (120), Expect = 2e-07
 Identities = 22/145 (15%), Positives = 45/145 (31%), Gaps = 19/145 (13%)

Query: 1   MSGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKL--EGASENL 58
           M    + R+ + GA GYI   + K  L  G+     VR+     N+   +L     +   
Sbjct: 1   MG--SRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGA 58

Query: 59  QLFKTDLLDYEALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKA 118
            +    + D+ +L  A      V      + +                   N++ +  + 
Sbjct: 59  NIVHGSIDDHASLVEAVKNVDVVISTVGSLQIE---------------SQVNIIKAIKEV 103

Query: 119 KVKRVVVVSSIGAVMLNPNWPKGQV 143
              +    S  G  + N +  +   
Sbjct: 104 GTVKRFFPSEFGNDVDNVHAVEPAK 128

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* Length = 346

 Score = 46.6 bits (110), Expect = 2e-06
 Identities = 18/143 (12%), Positives = 38/143 (26%), Gaps = 15/143 (10%)

Query: 6   KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDL 65
           K RV + GA G+I  ++    L      +   R      +          +   +    +
Sbjct: 10  KGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLI 69

Query: 66  LDYEALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVV 125
            + EA+            V+         +   Q           ++ +       +  +
Sbjct: 70  NEQEAMEKILKEHEIDIVVSTVGG----ESILDQ---------IALVKAMKAVGTIKRFL 116

Query: 126 VSSIGAV--MLNPNWPKGQVMDE 146
            S  G      +P  P   +  E
Sbjct: 117 PSEFGHDVNRADPVEPGLNMYRE 139

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} Length = 330

 Score = 46.7 bits (112), Expect = 3e-06
 Identities = 32/131 (24%), Positives = 46/131 (35%), Gaps = 24/131 (18%)

Query: 11  VTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEA 70
           + G  GYI S  VK L+ +G  V   V D  + +  H   +    E  + +  DL D   
Sbjct: 6   ICGGAGYIGSHAVKKLVDEGLSV--VVVD--NLQTGHEDAIT---EGAKFYNGDLRDKAF 58

Query: 71  LCA--ATAGCTGVFHVACPVPVGKVPNPE-VQLIDPA------VVGTKNVLNSCVKAKVK 121
           L           V H A    VG       ++   P       V G   +L    + KV 
Sbjct: 59  LRDVFTQENIEAVMHFAADSLVG-----VSME--KPLQYYNNNVYGALCLLEVMDEFKVD 111

Query: 122 RVVVVSSIGAV 132
           +  + SS  A 
Sbjct: 112 K-FIFSSTAAT 121

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} Length = 307

 Score = 45.6 bits (108), Expect = 5e-06
 Identities = 21/135 (15%), Positives = 42/135 (31%), Gaps = 18/135 (13%)

Query: 6   KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKK---LEGASENLQLFK 62
           + ++ + G  G I   +V   +  G   +  VR      N   K+       S  + L +
Sbjct: 2   ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLE 61

Query: 63  TDLLDYEALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKR 122
            D+ D+E L  A      V   A  + +                    ++ +  +A   +
Sbjct: 62  GDINDHETLVKAIKQVDIVICAAGRLLIE---------------DQVKIIKAIKEAGNVK 106

Query: 123 VVVVSSIGAVMLNPN 137
               S  G  +   +
Sbjct: 107 KFFPSEFGLDVDRHD 121

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 Length = 215

 Score = 41.6 bits (98), Expect = 9e-05
 Identities = 25/134 (18%), Positives = 42/134 (31%), Gaps = 20/134 (14%)

Query: 1   MSGEDKERVCVTGAGGYIASWLVKYLLLKGYM--VHGTVRDPCDEKNAHLKKLEGASENL 58
           M    K RV + GA G     L+  +L +  +  V    R       A   +L+     L
Sbjct: 1   MHSTPK-RVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKA----LAEHPRLDNPVGPL 55

Query: 59  QLFKTDLLDYEALCAATAGCTGVFHVACPVPVGKVPNPEVQ-LIDPAVVGTKNVLNSCVK 117
                     E L          F       + +  + E    +D        V    ++
Sbjct: 56  A---------ELLPQLDGSIDTAFC-CLGTTIKEAGSEEAFRAVD--FDLPLAVGKRALE 103

Query: 118 AKVKRVVVVSSIGA 131
              +  +VVS++GA
Sbjct: 104 MGARHYLVVSALGA 117

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} Length = 321

 Score = 41.8 bits (99), Expect = 1e-04
 Identities = 13/64 (20%), Positives = 28/64 (43%), Gaps = 11/64 (17%)

Query: 8  RVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLD 67
          R  +TG  G++  +L  +L  +   V GT R+   +             N+++   D++D
Sbjct: 14 RALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEAKL-----------PNVEMISLDIMD 62

Query: 68 YEAL 71
           + +
Sbjct: 63 SQRV 66

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* Length = 397

 Score = 40.7 bits (96), Expect = 3e-04
 Identities = 35/148 (23%), Positives = 50/148 (33%), Gaps = 34/148 (22%)

Query: 8   RVCVTGAGGYIASWLVKYLLL-KGYMV--------------HGTVRDPCDEKNAHL--KK 50
           RV V G  GYI S  V+ LL    + V              H   R+    K       K
Sbjct: 4   RVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPK 63

Query: 51  LEGASENLQLFKTDLLDYEALC---AATAGCTGVFHVACPVPVGKVPNPE-VQLIDPA-- 104
              A     L   D+ + + L            V H+   + VG     E V+  DP   
Sbjct: 64  PPWADRYAALEVGDVRNEDFLNGVFTRHGPIDAVVHMCAFLAVG-----ESVR--DPLKY 116

Query: 105 ----VVGTKNVLNSCVKAKVKRVVVVSS 128
               VVG   +L + +  K  +++  SS
Sbjct: 117 YDNNVVGILRLLQAMLLHKCDKIIFSSS 144

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* Length = 318

 Score = 40.3 bits (94), Expect = 3e-04
 Identities = 26/131 (19%), Positives = 45/131 (34%), Gaps = 19/131 (14%)

Query: 1   MSGED-KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQ 59
           M     K ++ + G  GYI + +VK  L  G+  +   R P   K   L + +  S    
Sbjct: 5   MEENGMKSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTR-PNSSKTTLLDEFQ--SLGAI 61

Query: 60  LFKTDLLDYEALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAK 119
           + K +L ++E L         V                  L  P ++    +L +   A 
Sbjct: 62  IVKGELDEHEKLVELMKKVDVVISA---------------LAFPQILDQFKILEAIKVAG 106

Query: 120 VKRVVVVSSIG 130
             +  + S  G
Sbjct: 107 NIKRFLPSDFG 117

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 Length = 699

 Score = 40.1 bits (94), Expect = 4e-04
 Identities = 33/138 (23%), Positives = 49/138 (35%), Gaps = 20/138 (14%)

Query: 2   SGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEG----ASEN 57
           S    + V VTG  GYI S  V  L+  GY     V D  +  N+    +         +
Sbjct: 7   SESTSKIVLVTGGAGYIGSHTVVELIENGYDC--VVAD--NLSNSTYDSVARLEVLTKHH 62

Query: 58  LQLFKTDLLDYEALCA--ATAGCTGVFHVACPVPVGK-VPNP----EVQLIDPAVVGTKN 110
           +  ++ DL D + L           V H A    VG+    P            ++GT  
Sbjct: 63  IPFYEVDLCDRKGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNN-----ILGTVV 117

Query: 111 VLNSCVKAKVKRVVVVSS 128
           +L    +  V + V  SS
Sbjct: 118 LLELMQQYNVSKFVFSSS 135

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} Length = 286

 Score = 39.5 bits (92), Expect = 5e-04
 Identities = 23/143 (16%), Positives = 48/143 (33%), Gaps = 28/143 (19%)

Query: 6   KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDL 65
              +   G G Y A  L + L  +G+ + GT R+P  ++   ++         +      
Sbjct: 5   TGTLLSFGHG-YTARVLSRALAPQGWRIIGTSRNP--DQMEAIRAS-----GAEPLLWPG 56

Query: 66  LDYEALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVV 125
            +  +L   T       H+         P+      DP +    + + +   A+ + V  
Sbjct: 57  EE-PSLDGVT-------HLLISTA----PDSGG---DPVLAALGDQI-AARAAQFRWVGY 100

Query: 126 VSSIGAVMLNPNWPKGQVMDEEC 148
           +S+        +   G  +DE  
Sbjct: 101 LSTTAV---YGDHD-GAWVDETT 119

>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant photosynthetic reaction center, peripheral antenna; HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1 Length = 154

 Score = 38.4 bits (88), Expect = 6e-04
 Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 9/35 (25%)

Query: 43 EKNAHLKKLEGASENLQLFKTDLLDYEALCA--AT 75
          EK A LKKL+ +   L+L+  D     AL A  AT
Sbjct: 18 EKQA-LKKLQAS---LKLYADD--SAPAL-AIKAT 45

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A* Length = 337

 Score = 39.0 bits (92), Expect = 7e-04
 Identities = 35/127 (27%), Positives = 50/127 (39%), Gaps = 9/127 (7%)

Query: 8   RVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEK-----N-AHLKKLEGASENLQLF 61
           R+ VTG  G+I S  V+ LL   Y           +      N A+L  ++     L+  
Sbjct: 2   RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDA-DPRLRFV 60

Query: 62  KTDLLDYEALCAATAGCTGVFHVACPVPVGK-VPNPEVQLIDPAVVGTKNVLNSCVKAKV 120
             D+ D   L     G   + H A    V + +    V   +  V GT+ +L   V A V
Sbjct: 61  HGDIRDAGLLARELRGVDAIVHFAAESHVDRSIAGASV-FTETNVQGTQTLLQCAVDAGV 119

Query: 121 KRVVVVS 127
            RVV VS
Sbjct: 120 GRVVHVS 126

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	248
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	100.0
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	100.0
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	100.0
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	100.0
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	100.0
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	100.0
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	100.0
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	100.0
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	100.0
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	100.0
3rih_A	293	Short chain dehydrogenase or reductase; structural	100.0
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	100.0
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	100.0
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	100.0
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	100.0
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	100.0
3imf_A	257	Short chain dehydrogenase; structural genomics, in	100.0
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	100.0
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	100.0
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	100.0
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	100.0
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	100.0
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	100.0
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	100.0
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	100.0
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	100.0
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	100.0
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	100.0
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	100.0
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	100.0
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	100.0
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	100.0
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	100.0
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	100.0
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	100.0
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	100.0
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	100.0
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	100.0
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	100.0
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	100.0
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	100.0
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	100.0
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	100.0
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	100.0
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	100.0
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	100.0
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	100.0
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	100.0
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	100.0
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	100.0
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	100.0
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	100.0
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	100.0
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	100.0
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	100.0
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	100.0
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	100.0
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	100.0
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	100.0
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	100.0
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	100.0
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	100.0
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	100.0
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	100.0
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	100.0
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	100.0
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	100.0
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	100.0
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	100.0
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	100.0
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	100.0
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	100.0
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	100.0
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	100.0
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	100.0
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	100.0
1xq1_A	266	Putative tropinone reducatse; structural genomics,	100.0
1spx_A	278	Short-chain reductase family member (5L265); paral	100.0
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.98
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	99.98
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	99.98
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	99.98
4dqx_A	277	Probable oxidoreductase protein; structural genomi	99.98
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	99.98
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	99.98
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	99.98
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	99.98
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	99.98
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	99.98
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	99.98
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	99.98
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	99.98
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	99.98
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	99.98
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	99.98
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	99.98
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	99.98
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	99.98
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	99.98
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	99.98
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	99.98
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	99.98
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	99.98
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	99.98
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	99.98
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	99.98
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	99.98
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	99.98
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	99.98
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	99.98
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	99.98
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	99.98
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	99.98
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.98
3cxt_A	291	Dehydrogenase with different specificities; rossma	99.97
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	99.97
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	99.97
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	99.97
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	99.97
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	99.97
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	99.97
1xkq_A	280	Short-chain reductase family member (5D234); parra	99.97
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	99.97
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	99.97
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	99.97
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	99.97
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	99.97
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	99.97
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	99.97
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	99.97
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	99.97
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	99.97
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	99.97
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.97
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	99.97
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	99.97
1xhl_A	297	Short-chain dehydrogenase/reductase family member	99.97
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	99.97
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	99.97
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	99.97
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	99.97
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	99.97
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	99.97
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	99.97
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	99.97
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	99.97
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	99.97
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	99.97
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	99.97
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	99.97
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	99.97
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	99.97
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	99.97
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	99.97
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	99.97
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	99.97
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	99.97
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	99.97
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	99.97
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	99.97
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	99.97
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	99.97
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	99.97
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	99.97
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	99.97
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	99.97
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	99.97
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	99.97
4e4y_A	244	Short chain dehydrogenase family protein; structur	99.97
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	99.97
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	99.97
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	99.97
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.97
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	99.97
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	99.97
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	99.97
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	99.97
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	99.97
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	99.97
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	99.97
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	99.97
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	99.97
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	99.97
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	99.97
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	99.97
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	99.97
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	99.97
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	99.97
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	99.97
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	99.97
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	99.97
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	99.97
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	99.97
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	99.97
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	99.97
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	99.97
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	99.97
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	99.97
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	99.97
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	99.96
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	99.96
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	99.96
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	99.96
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	99.96
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	99.96
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	99.96
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	99.96
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	99.96
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	99.96
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.96
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	99.96
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	99.96
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	99.96
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	99.96
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	99.96
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	99.96
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	99.96
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	99.96
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	99.96
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	99.96
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.96
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	99.96
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	99.96
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	99.96
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	99.96
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	99.96
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	99.96
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	99.96
4f6c_A	427	AUSA reductase domain protein; thioester reductase	99.96
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.96
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	99.96
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	99.96
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	99.96
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	99.96
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	99.96
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	99.96
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	99.96
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	99.96
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	99.96
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	99.96
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	99.96
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	99.96
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	99.96
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	99.96
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.96
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	99.95
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	99.95
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	99.95
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	99.95
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	99.95
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.95
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	99.95
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	99.95
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	99.95
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	99.95
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	99.95
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.95
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	99.95
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	99.95
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.95
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	99.95
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.94
4f6l_B	508	AUSA reductase domain protein; thioester reductase	99.94
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	99.94
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.94
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	99.94
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	99.94
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	99.94
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	99.94
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	99.94
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	99.94
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	99.94
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	99.94
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.94
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.94
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.94
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	99.93
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.93
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	99.93
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.93
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	99.92
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	99.92
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.92
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.92
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.91
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	99.91
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.91
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	99.91
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.9
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	99.9
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.9
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.9
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	99.9
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	99.9
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	99.9
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.89
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	99.88
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	99.88
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	99.88
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.87
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.85
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.84
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.83
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.82
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.82
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	99.79
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	99.78
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.72
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	99.55
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	99.35
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	99.27
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	99.24
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	99.16
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	99.06
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	98.97
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.94
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	98.91
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	98.88
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	98.87
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	98.87
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	98.83
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	98.7
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	98.66
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	98.65
1id1_A	153	Putative potassium channel protein; RCK domain, E.	98.61
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	98.57
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	98.52
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	98.45
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	98.4
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	98.38
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.3
3c85_A	183	Putative glutathione-regulated potassium-efflux S	98.26
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	98.2
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	98.2
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	98.19
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	98.17
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	98.16
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	98.15
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	98.12
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	98.08
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	98.06
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	98.04
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	98.03
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	98.01
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	98.0
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	97.99
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	97.99
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	97.96
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	97.95
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	97.95
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	97.94
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	97.93
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	97.92
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	97.91
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	97.91
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	97.89
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	97.87
3tl2_A	315	Malate dehydrogenase; center for structural genomi	97.85
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	97.82
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	97.8
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	97.77
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	97.77
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	97.77
3gms_A	340	Putative NADPH:quinone reductase; structural genom	97.77
1ldn_A	316	L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA	97.76
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	97.75
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	97.75
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	97.73
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	97.72
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	97.72
4eye_A	342	Probable oxidoreductase; structural genomics, niai	97.71
4h7p_A	345	Malate dehydrogenase; ssgcid, structural G seattle	97.71
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	97.7
3d0o_A	317	L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly	97.7
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	97.68
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	97.66
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	97.65
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.64
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	97.64
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	97.63
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	97.62
1y6j_A	318	L-lactate dehydrogenase; southeast collaboratory f	97.61
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	97.6
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	97.56
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	97.54
3hhp_A	312	Malate dehydrogenase; MDH, citric acid cycle, TCA	97.53
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	97.53
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	97.51
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	97.51
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	97.48
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	97.45
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	97.4
1ez4_A	318	Lactate dehydrogenase; rossmann fold, oxidoreducta	97.4
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	97.39
2nqt_A	352	N-acetyl-gamma-glutamyl-phosphate reductase; apopr	97.39
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	97.37
1dih_A	273	Dihydrodipicolinate reductase; oxidoreductase; HET	97.36
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	97.34
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	97.33
2hjr_A	328	Malate dehydrogenase; malaria, structural genomics	97.32
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	97.3
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	97.3
3nep_X	314	Malate dehydrogenase; halophIle, molecular adpatat	97.28
3ldh_A	330	Lactate dehydrogenase; oxidoreductase, CHOH donor,	97.27
2zqz_A	326	L-LDH, L-lactate dehydrogenase; oxidoreductase, ro	97.27
4e4t_A	419	Phosphoribosylaminoimidazole carboxylase, ATPase;	97.25
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	97.25
1lnq_A	336	MTHK channels, potassium channel related protein;	97.23
4g65_A	461	TRK system potassium uptake protein TRKA; structur	97.22
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	97.2
1lld_A	319	L-lactate dehydrogenase; oxidoreductase(CHOH (D)-N	97.19
3l07_A	285	Bifunctional protein fold; structural genomics, ID	97.19
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	97.19
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	97.19
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	97.18
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	97.17
1t2d_A	322	LDH-P, L-lactate dehydrogenase; ternary complex, o	97.17
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	97.17
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	97.17
2vns_A	215	Metalloreductase steap3; metal-binding, transmembr	97.14
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	97.14
4a5o_A	286	Bifunctional protein fold; oxidoreductase, hydrola	97.12
2x0j_A	294	Malate dehydrogenase; oxidoreductase, hyperthermop	97.11
3orq_A	377	N5-carboxyaminoimidazole ribonucleotide synthetas;	97.11
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	97.1
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	97.09
2ewd_A	317	Lactate dehydrogenase,; protein-substrate_cofactor	97.09
7mdh_A	375	Protein (malate dehydrogenase); chloroplastic mala	97.08
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	97.06
1guz_A	310	Malate dehydrogenase; oxidoreductase, tricarboxyli	97.06
3ngx_A	276	Bifunctional protein fold; methylenetetrahydrofola	97.04
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	97.04
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	97.03
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	97.03
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	97.02
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	96.99
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	96.99
2ph5_A	480	Homospermidine synthase; alpha-beta protein, struc	96.98
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	96.96
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	96.95
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	96.95
1hyh_A	309	L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2	96.94
3ax6_A	380	Phosphoribosylaminoimidazole carboxylase, ATPase;	96.92
1a4i_A	301	Methylenetetrahydrofolate dehydrogenase / methenyl	96.91
4f3y_A	272	DHPR, dihydrodipicolinate reductase; structural ge	96.91
1a5z_A	319	L-lactate dehydrogenase; oxidoreductase, glycolysi	96.89
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	96.89
1xyg_A	359	Putative N-acetyl-gamma-glutamyl-phosphate reduct;	96.89
2i6t_A	303	Ubiquitin-conjugating enzyme E2-like isoform A; L-	96.88
2pv7_A	298	T-protein [includes: chorismate mutase (EC 5.4.99	96.87
2xxj_A	310	L-LDH, L-lactate dehydrogenase; oxidoreductase, hy	96.87
2ozp_A	345	N-acetyl-gamma-glutamyl-phosphate reductase; amino	96.87
3dfz_A	223	SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase	96.86
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	96.86
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	96.85
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	96.84
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	96.79
3q2o_A	389	Phosphoribosylaminoimidazole carboxylase, ATPase;	96.77
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	96.75
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	96.75
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	96.75
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	96.75
3k5i_A	403	Phosphoribosyl-aminoimidazole carboxylase; purine	96.73
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	96.72
3h5n_A	353	MCCB protein; ubiquitin-activating enzyme, microci	96.72
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	96.72
1b0a_A	288	Protein (fold bifunctional protein); folate, dehyd	96.69
3rui_A	340	Ubiquitin-like modifier-activating enzyme ATG7; au	96.68
4g65_A	461	TRK system potassium uptake protein TRKA; structur	96.65
2d4a_B	308	Malate dehydrogenase; archaea, hyperthermophIle, o	96.65
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	96.64
2c2x_A	281	Methylenetetrahydrofolate dehydrogenase- methenylt	96.63
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	96.62
3pp8_A	315	Glyoxylate/hydroxypyruvate reductase A; structural	96.62
2ew2_A	316	2-dehydropantoate 2-reductase, putative; alpha-str	96.62
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	96.61
3lk7_A	451	UDP-N-acetylmuramoylalanine--D-glutamate ligase; a	96.59
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	96.57
2raf_A	209	Putative dinucleotide-binding oxidoreductase; NP_7	96.56
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	96.55
2hjs_A	340	USG-1 protein homolog; aspartate-semialdehyde dehy	96.55
1ys4_A	354	Aspartate-semialdehyde dehydrogenase; oxidoreducta	96.54
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	96.54
3gg2_A	450	Sugar dehydrogenase, UDP-glucose/GDP-mannose dehyd	96.52
3qy9_A	243	DHPR, dihydrodipicolinate reductase; rossmann fold	96.52
4huj_A	220	Uncharacterized protein; PSI-biology, nysgrc, stru	96.51
4ffl_A	363	PYLC; amino acid, biosynthesis of pyrrolysine, iso	96.51
3dtt_A	245	NADP oxidoreductase; structural genomics, joint ce	96.48
1obb_A	480	Maltase, alpha-glucosidase; glycosidase, sulfinic	96.47
1y8q_A	346	Ubiquitin-like 1 activating enzyme E1A; SUMO, hete	96.47
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	96.46
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	96.43
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	96.43

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=100.00  E-value=1.5e-39  Score=263.06  Aligned_cols=214  Identities=17%  Similarity=0.144  Sum_probs=168.6

Q ss_pred             CCCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-----
Q 025755            2 SGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-----   76 (248)
Q Consensus         2 ~~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-----   76 (248)
                      ++|++|+++||||++|||+++++.|+++|++|++++|+.+ ..++..+++.....++.++++|++|+++++++++     
T Consensus         3 ~sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~-~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~   81 (254)
T 4fn4_A            3 QSLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLED-RLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFET   81 (254)
T ss_dssp             GGGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHH-HHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHH-HHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            4689999999999999999999999999999999999864 3344455555556789999999999999988875     


Q ss_pred             --CCCEEEEccccCCCCC-----CCCccccchhhhHHHHHHHHHHHHh----cCCCEEEEEeccceeccCCCCCCCCccC
Q 025755           77 --GCTGVFHVACPVPVGK-----VPNPEVQLIDPAVVGTKNVLNSCVK----AKVKRVVVVSSIGAVMLNPNWPKGQVMD  145 (248)
Q Consensus        77 --~id~vi~~ag~~~~~~-----~~~~~~~~~~~n~~g~~~~~~~~~~----~~~~~iV~vSS~~~~~~~~~~~~~~~~~  145 (248)
                        ++|++|||||+.....     ..+.|+..+++|+.|+.++.+++.+    .+.++||++||..+..+.+....     
T Consensus        82 ~G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~~~~~~~~~-----  156 (254)
T 4fn4_A           82 YSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRGGFAGAP-----  156 (254)
T ss_dssp             HSCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCSSSSCHH-----
T ss_pred             cCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhcCCCCCChH-----
Confidence              5899999999754321     2345678999999998777776654    47789999999988777654333     


Q ss_pred             CCCCCchhhhccccchHHHHHH----HHHHHHHHHHHhCCccEEEEccCeeecCCCCCCCCccHHHHHHH-----HcCC-
Q 025755          146 EECWSDEEFCKATENYYCLAKT----IAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTINTSSLLLLGF-----LKGF-  215 (248)
Q Consensus       146 e~~~~~~~~~~~~~~~Y~~sK~----~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~-----~~~~-  215 (248)
                                      |+.||+    +++.++.++++++ ||||+|+||.+.+|+............+..     ..++ 
T Consensus       157 ----------------Y~asKaal~~ltr~lA~ela~~g-IrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~R~  219 (254)
T 4fn4_A          157 ----------------YTVAKHGLIGLTRSIAAHYGDQG-IRAVAVLPGTVKTNIGLGSSKPSELGMRTLTKLMSLSSRL  219 (254)
T ss_dssp             ----------------HHHHHHHHHHHHHHHHHHHGGGT-EEEEEEEECSBCSSCTTSCSSCCHHHHHHHHHHHTTCCCC
T ss_pred             ----------------HHHHHHHHHHHHHHHHHHhhhhC-eEEEEEEeCCCCCcccccccCCcHHHHHHHHhcCCCCCCC
Confidence                            999995    8888888888765 999999999999998654322222211111     1132 


Q ss_pred             -----------CCCCCCCchhhhhhhhhccceeE
Q 025755          216 -----------FFTTPSHSYMLERTLVLNQGVRL  238 (248)
Q Consensus       216 -----------~l~~~~~~~~~g~~l~vd~g~~~  238 (248)
                                 ||.++.+.|+||++|.||||+++
T Consensus       220 g~pediA~~v~fLaSd~a~~iTG~~i~VDGG~t~  253 (254)
T 4fn4_A          220 AEPEDIANVIVFLASDEASFVNGDAVVVDGGLTV  253 (254)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             cCHHHHHHHHHHHhCchhcCCcCCEEEeCCCccc
Confidence                       89999999999999999999875

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=100.00  E-value=4.4e-39  Score=260.47  Aligned_cols=214  Identities=15%  Similarity=0.087  Sum_probs=168.1

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC------
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA------   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~------   76 (248)
                      +|+||+++||||++|||+++++.|+++|++|++.+|+.+ ...+..+++.....++.++++|++|+++++++++      
T Consensus         6 ~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~-~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   84 (255)
T 4g81_D            6 DLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRAT-LLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEG   84 (255)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHH-HHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTT
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHH-HHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHC
Confidence            589999999999999999999999999999999999864 3334445555556789999999999999988875      


Q ss_pred             -CCCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHHh-----cCCCEEEEEeccceeccCCCCCCCCccCC
Q 025755           77 -GCTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCVK-----AKVKRVVVVSSIGAVMLNPNWPKGQVMDE  146 (248)
Q Consensus        77 -~id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~~-----~~~~~iV~vSS~~~~~~~~~~~~~~~~~e  146 (248)
                       ++|++|||||.......    .++|+..+++|+.|+..+.+++.+     .+.++||++||..+..+.+....      
T Consensus        85 G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~~~~~~~------  158 (255)
T 4g81_D           85 IHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAARPTVAP------  158 (255)
T ss_dssp             CCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSBCTTCHH------
T ss_pred             CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCCCCCchh------
Confidence             58999999998765422    355678999999998887776643     25689999999888777665333      


Q ss_pred             CCCCchhhhccccchHHHHHH----HHHHHHHHHHHhCCccEEEEccCeeecCCCCCCC--Ccc-HHHHHHHHcCC----
Q 025755          147 ECWSDEEFCKATENYYCLAKT----IAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTI--NTS-SLLLLGFLKGF----  215 (248)
Q Consensus       147 ~~~~~~~~~~~~~~~Y~~sK~----~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~--~~~-~~~~~~~~~~~----  215 (248)
                                     |+.||+    +++.++.++++++ ||||+|+||.+.+|+.....  +.. ..+..+..-++    
T Consensus       159 ---------------Y~asKaal~~ltr~lA~ela~~g-IrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl~R~g~p  222 (255)
T 4g81_D          159 ---------------YTAAKGGIKMLTCSMAAEWAQFN-IQTNAIGPGYILTDMNTALIEDKQFDSWVKSSTPSQRWGRP  222 (255)
T ss_dssp             ---------------HHHHHHHHHHHHHHHHHHHGGGT-EEEEEEEECSBCCGGGHHHHTCHHHHHHHHHHSTTCSCBCG
T ss_pred             ---------------HHHHHHHHHHHHHHHHHHhcccC-eEEEEEeeCCCCCchhhcccCCHHHHHHHHhCCCCCCCcCH
Confidence                           999995    8888888888765 99999999999999754221  111 11222222232    


Q ss_pred             --------CCCCCCCchhhhhhhhhccceeEE
Q 025755          216 --------FFTTPSHSYMLERTLVLNQGVRLY  239 (248)
Q Consensus       216 --------~l~~~~~~~~~g~~l~vd~g~~~~  239 (248)
                              ||.++.+.|+||+.|.||||+.++
T Consensus       223 ediA~~v~fL~S~~a~~iTG~~i~VDGG~~Av  254 (255)
T 4g81_D          223 EELIGTAIFLSSKASDYINGQIIYVDGGWLAV  254 (255)
T ss_dssp             GGGHHHHHHHHSGGGTTCCSCEEEESTTGGGB
T ss_pred             HHHHHHHHHHhCchhCCCcCCEEEECCCeEee
Confidence                    889999999999999999998765

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=100.00  E-value=5.1e-38  Score=251.56  Aligned_cols=205  Identities=13%  Similarity=0.083  Sum_probs=159.8

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC---CCCE
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA---GCTG   80 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~---~id~   80 (248)
                      ++||+++||||++|||+++++.|+++|++|++++|+.+....       ....++..+++|++|+++++++++   ++|+
T Consensus         9 f~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~-------~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDi   81 (242)
T 4b79_A            9 YAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHA-------PRHPRIRREELDITDSQRLQRLFEALPRLDV   81 (242)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTS-------CCCTTEEEEECCTTCHHHHHHHHHHCSCCSE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhh-------hhcCCeEEEEecCCCHHHHHHHHHhcCCCCE
Confidence            589999999999999999999999999999999998753221       124578999999999999988876   6899


Q ss_pred             EEEccccCCCCC--CCCccccchhhhHHHHHHHHHHHHhc---CCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhh
Q 025755           81 VFHVACPVPVGK--VPNPEVQLIDPAVVGTKNVLNSCVKA---KVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFC  155 (248)
Q Consensus        81 vi~~ag~~~~~~--~~~~~~~~~~~n~~g~~~~~~~~~~~---~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~  155 (248)
                      +|||||+..+..  ..++|+.++++|+.|+..+.+++.+.   +.++||++||..+..+.+....               
T Consensus        82 LVNNAGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~~~~~~~~---------------  146 (242)
T 4b79_A           82 LVNNAGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRGGSILNIASMYSTFGSADRPA---------------  146 (242)
T ss_dssp             EEECCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCEEEEEECCGGGTSCCSSCHH---------------
T ss_pred             EEECCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeeccccCCCCCCHH---------------
Confidence            999999765321  13456789999999998888877654   3489999999988777665333               


Q ss_pred             ccccchHHHHHH----HHHHHHHHHHHhCCccEEEEccCeeecCCCCCCCCccHHHHHHHH----cCC------------
Q 025755          156 KATENYYCLAKT----IAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTINTSSLLLLGFL----KGF------------  215 (248)
Q Consensus       156 ~~~~~~Y~~sK~----~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~----~~~------------  215 (248)
                            |+.||+    +++.++.++++++ ||||+|+||.+.+|+...... .....+++.    -++            
T Consensus       147 ------Y~asKaav~~ltr~lA~Ela~~g-IrVNaV~PG~i~T~m~~~~~~-~~~~~~~~~~~~PlgR~g~peeiA~~v~  218 (242)
T 4b79_A          147 ------YSASKGAIVQLTRSLACEYAAER-IRVNAIAPGWIDTPLGAGLKA-DVEATRRIMQRTPLARWGEAPEVASAAA  218 (242)
T ss_dssp             ------HHHHHHHHHHHHHHHHHHHGGGT-EEEEEEEECSBCCC-----CC-CHHHHHHHHHTCTTCSCBCHHHHHHHHH
T ss_pred             ------HHHHHHHHHHHHHHHHHHhhhcC-eEEEEEEeCCCCChhhhcccC-CHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence                  999995    8888888888875 999999999999998654321 122222222    222            


Q ss_pred             CCCCCCCchhhhhhhhhccceeE
Q 025755          216 FFTTPSHSYMLERTLVLNQGVRL  238 (248)
Q Consensus       216 ~l~~~~~~~~~g~~l~vd~g~~~  238 (248)
                      ||.++.+.|+||++|.||||+.+
T Consensus       219 fLaSd~a~~iTG~~l~VDGG~la  241 (242)
T 4b79_A          219 FLCGPGASFVTGAVLAVDGGYLC  241 (242)
T ss_dssp             HHTSGGGTTCCSCEEEESTTGGG
T ss_pred             HHhCchhcCccCceEEECccHhh
Confidence            89999999999999999999753

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=100.00  E-value=8e-38  Score=253.97  Aligned_cols=214  Identities=20%  Similarity=0.177  Sum_probs=164.1

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC------
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA------   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~------   76 (248)
                      +|++|+++||||++|||+++++.|+++|++|++++|+.++.  ...+.+.....++.++.+|++|+++++++++      
T Consensus         4 ~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~--~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~   81 (258)
T 4gkb_A            4 NLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDG--AFLDALAQRQPRATYLPVELQDDAQCRDAVAQTIATF   81 (258)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCH--HHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccH--HHHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHHh
Confidence            58999999999999999999999999999999999987543  2233344445788999999999999888765      


Q ss_pred             -CCCEEEEccccCCCCC---CCCccccchhhhHHHHHHHHHHHHhc---CCCEEEEEeccceeccCCCCCCCCccCCCCC
Q 025755           77 -GCTGVFHVACPVPVGK---VPNPEVQLIDPAVVGTKNVLNSCVKA---KVKRVVVVSSIGAVMLNPNWPKGQVMDEECW  149 (248)
Q Consensus        77 -~id~vi~~ag~~~~~~---~~~~~~~~~~~n~~g~~~~~~~~~~~---~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~  149 (248)
                       ++|++|||||+.....   ..+.|+..+++|+.++..+.+++.+.   +.++||++||..+..+.+....         
T Consensus        82 G~iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~~~~~~~~---------  152 (258)
T 4gkb_A           82 GRLDGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATRGAIVNISSKTAVTGQGNTSG---------  152 (258)
T ss_dssp             SCCCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTHHHHCCSSCHH---------
T ss_pred             CCCCEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEeehhhccCCCCchH---------
Confidence             5899999999764332   23456778999999998888877653   3489999999988877765433         


Q ss_pred             CchhhhccccchHHHHHH----HHHHHHHHHHHhCCccEEEEccCeeecCCCCCCCC---ccHHHHHHHH----cC-C--
Q 025755          150 SDEEFCKATENYYCLAKT----IAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTIN---TSSLLLLGFL----KG-F--  215 (248)
Q Consensus       150 ~~~~~~~~~~~~Y~~sK~----~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~---~~~~~~~~~~----~~-~--  215 (248)
                                  |+.||+    +++.++.++++++ ||||+|+||.+.+|+......   ..........    -+ +  
T Consensus       153 ------------Y~asKaav~~ltr~lA~ela~~g-IrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~plg~R~g  219 (258)
T 4gkb_A          153 ------------YCASKGAQLALTREWAVALREHG-VRVNAVIPAEVMTPLYRNWIATFEDPEAKLAEIAAKVPLGRRFT  219 (258)
T ss_dssp             ------------HHHHHHHHHHHHHHHHHHHGGGT-CEEEEEEECSBCCSCC-----------CHHHHHHTTCTTTTSCB
T ss_pred             ------------HHHHHHHHHHHHHHHHHHhcccC-eEEEEEecCCCCChhHhhhhhcccChHHHHHHHHhcCCCCCCCc
Confidence                        999995    7888888888765 999999999999998653211   1111111211    11 1  


Q ss_pred             ----------CCCCCCCchhhhhhhhhccceeEEE
Q 025755          216 ----------FFTTPSHSYMLERTLVLNQGVRLYR  240 (248)
Q Consensus       216 ----------~l~~~~~~~~~g~~l~vd~g~~~~~  240 (248)
                                ||.++.+.|+||++|.||||++.+.
T Consensus       220 ~peeiA~~v~fLaS~~a~~iTG~~i~VDGG~T~l~  254 (258)
T 4gkb_A          220 TPDEIADTAVFLLSPRASHTTGEWLFVDGGYTHLD  254 (258)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTTSC
T ss_pred             CHHHHHHHHHHHhCchhcCccCCeEEECCCcchhh
Confidence                      8899999999999999999987543

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=100.00  E-value=4.4e-38  Score=252.49  Aligned_cols=210  Identities=17%  Similarity=0.156  Sum_probs=164.6

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC--CCCE
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA--GCTG   80 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~--~id~   80 (248)
                      +|+||+++||||++|||+++++.|+++|++|++.+|+..+   ...+.+.....++..+.+|++|+++++.+++  ++|+
T Consensus         6 ~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~---~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~g~iDi   82 (247)
T 4hp8_A            6 SLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPD---ETLDIIAKDGGNASALLIDFADPLAAKDSFTDAGFDI   82 (247)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCCH---HHHHHHHHTTCCEEEEECCTTSTTTTTTSSTTTCCCE
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcHH---HHHHHHHHhCCcEEEEEccCCCHHHHHHHHHhCCCCE
Confidence            4899999999999999999999999999999999998643   2233344446789999999999998888775  5899


Q ss_pred             EEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHHh----cC-CCEEEEEeccceeccCCCCCCCCccCCCCCCc
Q 025755           81 VFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCVK----AK-VKRVVVVSSIGAVMLNPNWPKGQVMDEECWSD  151 (248)
Q Consensus        81 vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~~----~~-~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~  151 (248)
                      +|||||+......    .++|+.++++|+.|+..+.+++.+    .+ .++||++||..+..+.+....           
T Consensus        83 LVNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g~~~~~~-----------  151 (247)
T 4hp8_A           83 LVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGGIRVPS-----------  151 (247)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCSSCHH-----------
T ss_pred             EEECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCCCCCChH-----------
Confidence            9999998765422    345778999999999888777543    33 589999999888777665333           


Q ss_pred             hhhhccccchHHHHHH----HHHHHHHHHHHhCCccEEEEccCeeecCCCCCCCCccHHHHHHHH----cCC--------
Q 025755          152 EEFCKATENYYCLAKT----IAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTINTSSLLLLGFL----KGF--------  215 (248)
Q Consensus       152 ~~~~~~~~~~Y~~sK~----~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~----~~~--------  215 (248)
                                |+.||+    +++.++.++++++ ||||+|+||++.+|+..... ......+.+.    -++        
T Consensus       152 ----------Y~asKaav~~ltr~lA~Ela~~g-IrVNaV~PG~i~T~~~~~~~-~~~~~~~~~~~~~PlgR~g~peeiA  219 (247)
T 4hp8_A          152 ----------YTAAKHGVAGLTKLLANEWAAKG-INVNAIAPGYIETNNTEALR-ADAARNKAILERIPAGRWGHSEDIA  219 (247)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHGGGT-EEEEEEEECSBCSGGGHHHH-TSHHHHHHHHTTCTTSSCBCTHHHH
T ss_pred             ----------HHHHHHHHHHHHHHHHHHHhhcC-eEEEEEeeCCCCCcchhhcc-cCHHHHHHHHhCCCCCCCcCHHHHH
Confidence                      999995    8888888888875 99999999999999754211 1111222222    122        


Q ss_pred             ----CCCCCCCchhhhhhhhhccceeE
Q 025755          216 ----FFTTPSHSYMLERTLVLNQGVRL  238 (248)
Q Consensus       216 ----~l~~~~~~~~~g~~l~vd~g~~~  238 (248)
                          ||.++.+.|+||++|.||||+.+
T Consensus       220 ~~v~fLaSd~a~~iTG~~i~VDGG~~A  246 (247)
T 4hp8_A          220 GAAVFLSSAAADYVHGAILNVDGGWLA  246 (247)
T ss_dssp             HHHHHHTSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHHhCchhcCCcCCeEEECccccc
Confidence                89999999999999999999863

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=100.00  E-value=1.8e-37  Score=253.25  Aligned_cols=209  Identities=18%  Similarity=0.136  Sum_probs=159.6

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-------
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-------   76 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-------   76 (248)
                      |++|++|||||++|||+++++.|+++|++|++++|+.+. .+...+++   ..++..+++|++|+++++++++       
T Consensus        27 L~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~-l~~~~~~~---g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G  102 (273)
T 4fgs_A           27 LNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDV-LDAAIAEI---GGGAVGIQADSANLAELDRLYEKVKAEAG  102 (273)
T ss_dssp             TTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHH-HHHHHHHH---CTTCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             hCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHH-HHHHHHHc---CCCeEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            889999999999999999999999999999999998643 33333333   4578899999999999888875       


Q ss_pred             CCCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHHhc--CCCEEEEEeccceeccCCCCCCCCccCCCCCC
Q 025755           77 GCTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCVKA--KVKRVVVVSSIGAVMLNPNWPKGQVMDEECWS  150 (248)
Q Consensus        77 ~id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~~~--~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~  150 (248)
                      ++|++|||||.......    .+.|+..+++|+.|+.++.+++.+.  +.++||++||..+..+.+....          
T Consensus       103 ~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~~~~~~~~~~----------  172 (273)
T 4fgs_A          103 RIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAGSTGTPAFSV----------  172 (273)
T ss_dssp             CEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGGSCCTTCHH----------
T ss_pred             CCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhhccCCCCchH----------
Confidence            58999999998654422    3456789999999999999999876  4479999999888777665333          


Q ss_pred             chhhhccccchHHHHHH----HHHHHHHHHHHhCCccEEEEccCeeecCCCCCCCCcc----HHHH----HHHHcCC---
Q 025755          151 DEEFCKATENYYCLAKT----IAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTINTS----SLLL----LGFLKGF---  215 (248)
Q Consensus       151 ~~~~~~~~~~~Y~~sK~----~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~~~----~~~~----~~~~~~~---  215 (248)
                                 |+.||+    +++.++.+++++ |||||+|+||.+.+|+........    ..+.    ....-++   
T Consensus       173 -----------Y~asKaav~~ltr~lA~Ela~~-gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~  240 (273)
T 4fgs_A          173 -----------YAASKAALRSFARNWILDLKDR-GIRINTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQVPMGRVGR  240 (273)
T ss_dssp             -----------HHHHHHHHHHHHHHHHHHTTTS-CEEEEEEEECSBCC---------CHHHHHHHHHHHHHHSTTSSCBC
T ss_pred             -----------HHHHHHHHHHHHHHHHHHhccc-CeEEEEEeeCCCCChhHHHhhccCchhhHHHHHHHHhcCCCCCCcC
Confidence                       999996    666677777665 599999999999999754321111    1111    1222222   


Q ss_pred             ---------CCCCCCCchhhhhhhhhccceeE
Q 025755          216 ---------FFTTPSHSYMLERTLVLNQGVRL  238 (248)
Q Consensus       216 ---------~l~~~~~~~~~g~~l~vd~g~~~  238 (248)
                               ||.++.+.|+||+.|.||||.++
T Consensus       241 peeiA~~v~FLaSd~a~~iTG~~i~VDGG~s~  272 (273)
T 4fgs_A          241 AEEVAAAALFLASDDSSFVTGAELFVDGGSAQ  272 (273)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESTTTTT
T ss_pred             HHHHHHHHHHHhCchhcCccCCeEeECcChhh
Confidence                     89999999999999999999864

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=100.00  E-value=1.1e-36  Score=248.16  Aligned_cols=215  Identities=14%  Similarity=0.106  Sum_probs=164.4

Q ss_pred             CCCCCCcEEEEEcCcc--HHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcC-CCCCeEEEEccCCCHHHHHHHhC-
Q 025755            1 MSGEDKERVCVTGAGG--YIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEG-ASENLQLFKTDLLDYEALCAATA-   76 (248)
Q Consensus         1 m~~l~~k~vlVtG~~g--~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Di~d~~~~~~~~~-   76 (248)
                      |++|++|+++||||+|  |||+++++.|+++|++|++++|+.... +...+.+.. ...++.++++|++|+++++++++ 
T Consensus         1 M~~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~-~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   79 (256)
T 4fs3_A            1 MLNLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSR-KELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQ   79 (256)
T ss_dssp             CCCCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGH-HHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHH
T ss_pred             CcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHH-HHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHH
Confidence            8889999999999876  999999999999999999999986432 222222322 23578999999999999888765 


Q ss_pred             ------CCCEEEEccccCCCCCC--------CCccccchhhhHHHHHHHHHHHHhc--CCCEEEEEeccceeccCCCCCC
Q 025755           77 ------GCTGVFHVACPVPVGKV--------PNPEVQLIDPAVVGTKNVLNSCVKA--KVKRVVVVSSIGAVMLNPNWPK  140 (248)
Q Consensus        77 ------~id~vi~~ag~~~~~~~--------~~~~~~~~~~n~~g~~~~~~~~~~~--~~~~iV~vSS~~~~~~~~~~~~  140 (248)
                            ++|++|||||.......        .+.|...+++|+.+...+.+++.+.  +.++||++||..+..+.+....
T Consensus        80 ~~~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~~~~~~~~~~~  159 (256)
T 4fs3_A           80 IGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGEFAVQNYNV  159 (256)
T ss_dssp             HHHHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECGGGTSCCTTTHH
T ss_pred             HHHHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEeccccccCcccchh
Confidence                  68999999997643211        1233456789999999888888765  4579999999888777655333


Q ss_pred             CCccCCCCCCchhhhccccchHHHHHH----HHHHHHHHHHHhCCccEEEEccCeeecCCCCCCCCccHHHHH----HHH
Q 025755          141 GQVMDEECWSDEEFCKATENYYCLAKT----IAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTINTSSLLLL----GFL  212 (248)
Q Consensus       141 ~~~~~e~~~~~~~~~~~~~~~Y~~sK~----~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~----~~~  212 (248)
                                           |+.||+    +++.++.++++++ ||||+|+||.+.+|+...... .+...+    +..
T Consensus       160 ---------------------Y~asKaal~~ltr~lA~Ela~~g-IrVN~V~PG~i~T~~~~~~~~-~~~~~~~~~~~~P  216 (256)
T 4fs3_A          160 ---------------------MGVAKASLEANVKYLALDLGPDN-IRVNAISAGPIRTLSAKGVGG-FNTILKEIKERAP  216 (256)
T ss_dssp             ---------------------HHHHHHHHHHHHHHHHHHHGGGT-EEEEEEEECCCCSGGGTTCTT-HHHHHHHHHHHST
T ss_pred             ---------------------hHHHHHHHHHHHHHHHHHhCccC-eEEEEEecCCCCChhhhhccC-CHHHHHHHHhcCC
Confidence                                 999995    7788888888765 999999999999987654321 122222    222


Q ss_pred             cCC------------CCCCCCCchhhhhhhhhccceeEE
Q 025755          213 KGF------------FFTTPSHSYMLERTLVLNQGVRLY  239 (248)
Q Consensus       213 ~~~------------~l~~~~~~~~~g~~l~vd~g~~~~  239 (248)
                      -++            ||.++.+.|+||++|.||||++++
T Consensus       217 l~R~g~peevA~~v~fL~Sd~a~~iTG~~i~VDGG~~av  255 (256)
T 4fs3_A          217 LKRNVDQVEVGKTAAYLLSDLSSGVTGENIHVDSGFHAI  255 (256)
T ss_dssp             TSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             CCCCcCHHHHHHHHHHHhCchhcCccCCEEEECcCHHhc
Confidence            222            889999999999999999999865

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=100.00  E-value=1.1e-35  Score=239.36  Aligned_cols=201  Identities=17%  Similarity=0.173  Sum_probs=154.9

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-------CC
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-------GC   78 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-------~i   78 (248)
                      +|+||||||++|||+++++.|+++|++|++++|+.+.     .++......++.++++|++|+++++++++       ++
T Consensus         2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~-----~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~i   76 (247)
T 3ged_A            2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKR-----SADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQRI   76 (247)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHH-----HHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHH-----HHHHHHhcCCEEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            5999999999999999999999999999999998532     22233335678999999999999888765       68


Q ss_pred             CEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHHhc---CCCEEEEEeccceeccCCCCCCCCccCCCCCCc
Q 025755           79 TGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCVKA---KVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSD  151 (248)
Q Consensus        79 d~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~~~---~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~  151 (248)
                      |++|||||.......    .++|+.++++|+.++..+.+++.+.   +.++||++||..+..+.+....           
T Consensus        77 DiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~G~IInisS~~~~~~~~~~~~-----------  145 (247)
T 3ged_A           77 DVLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNKGRIINIASTRAFQSEPDSEA-----------  145 (247)
T ss_dssp             CEEEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGTSCCTTCHH-----------
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCcEEEEeecccccCCCCCHH-----------
Confidence            999999997654422    3456789999999998888777553   3489999999888777665333           


Q ss_pred             hhhhccccchHHHHHH----HHHHHHHHHHHhCCccEEEEccCeeecCCCCCCCCccHHHHHHHHcCC------------
Q 025755          152 EEFCKATENYYCLAKT----IAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKGF------------  215 (248)
Q Consensus       152 ~~~~~~~~~~Y~~sK~----~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~~~------------  215 (248)
                                |+.||+    +++.++.++++  +||||+|+||++.+|+....   ......+..-++            
T Consensus       146 ----------Y~asKaal~~ltk~lA~ela~--~IrVN~I~PG~i~t~~~~~~---~~~~~~~~Pl~R~g~pediA~~v~  210 (247)
T 3ged_A          146 ----------YASAKGGIVALTHALAMSLGP--DVLVNCIAPGWINVTEQQEF---TQEDCAAIPAGKVGTPKDISNMVL  210 (247)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHTT--TSEEEEEEECSBCCCC---C---CHHHHHTSTTSSCBCHHHHHHHHH
T ss_pred             ----------HHHHHHHHHHHHHHHHHHHCC--CCEEEEEecCcCCCCCcHHH---HHHHHhcCCCCCCcCHHHHHHHHH
Confidence                      999995    88888888875  59999999999999876532   222222222222            


Q ss_pred             CCCCCCCchhhhhhhhhccceeEE
Q 025755          216 FFTTPSHSYMLERTLVLNQGVRLY  239 (248)
Q Consensus       216 ~l~~~~~~~~~g~~l~vd~g~~~~  239 (248)
                      ||.+  +.|+||++|.||||+++-
T Consensus       211 fL~s--~~~iTG~~i~VDGG~s~r  232 (247)
T 3ged_A          211 FLCQ--QDFITGETIIVDGGMSKR  232 (247)
T ss_dssp             HHHH--CSSCCSCEEEESTTGGGC
T ss_pred             HHHh--CCCCCCCeEEECcCHHHh
Confidence            6665  479999999999998754

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=2.2e-35  Score=241.26  Aligned_cols=214  Identities=21%  Similarity=0.217  Sum_probs=161.5

Q ss_pred             CCCCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCC-CCeEEEEccCCCHHHHHHHhC---
Q 025755            1 MSGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGAS-ENLQLFKTDLLDYEALCAATA---   76 (248)
Q Consensus         1 m~~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~Di~d~~~~~~~~~---   76 (248)
                      |+++++|+++||||+||||+++++.|+++|++|++++|+.+. .....+.+.... .++.++.+|++|.++++++++   
T Consensus         5 m~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~-~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   83 (262)
T 3pk0_A            5 MFDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTAD-IDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAV   83 (262)
T ss_dssp             TTCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHH-HHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence            667899999999999999999999999999999999998643 233333343333 579999999999999988876   


Q ss_pred             ----CCCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHHhc----CCCEEEEEecccee-ccCCCCCCCCc
Q 025755           77 ----GCTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCVKA----KVKRVVVVSSIGAV-MLNPNWPKGQV  143 (248)
Q Consensus        77 ----~id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~~~----~~~~iV~vSS~~~~-~~~~~~~~~~~  143 (248)
                          ++|+||||||.......    .+.|+..+++|+.++.++++++.+.    +.++||++||..+. .+.+..     
T Consensus        84 ~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~-----  158 (262)
T 3pk0_A           84 EEFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPITGYPGW-----  158 (262)
T ss_dssp             HHHSCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTTTBCCTTC-----
T ss_pred             HHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCCCCC-----
Confidence                79999999998654322    2345678999999999988887664    67899999997754 443322     


Q ss_pred             cCCCCCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCCCccHHHHHHHHcC----C-
Q 025755          144 MDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKG----F-  215 (248)
Q Consensus       144 ~~e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~~----~-  215 (248)
                                      ..|+.||++.+.+.+.++.+   .|++||+|+||.+++|+....   .......+...    + 
T Consensus       159 ----------------~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~---~~~~~~~~~~~~p~~r~  219 (262)
T 3pk0_A          159 ----------------SHYGATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLEN---GEEYIASMARSIPAGAL  219 (262)
T ss_dssp             ----------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHTT---CHHHHHHHHTTSTTSSC
T ss_pred             ----------------hhhHHHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCcccccc---CHHHHHHHHhcCCCCCC
Confidence                            34999998666665555544   369999999999999864322   11222222211    1 


Q ss_pred             -----------CCCCCCCchhhhhhhhhccceeEE
Q 025755          216 -----------FFTTPSHSYMLERTLVLNQGVRLY  239 (248)
Q Consensus       216 -----------~l~~~~~~~~~g~~l~vd~g~~~~  239 (248)
                                 |+.++.+.|+||+++.||||+.+.
T Consensus       220 ~~p~dva~~v~~L~s~~~~~itG~~i~vdGG~~~~  254 (262)
T 3pk0_A          220 GTPEDIGHLAAFLATKEAGYITGQAIAVDGGQVLP  254 (262)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTCC
T ss_pred             cCHHHHHHHHHHHhCccccCCcCCEEEECCCeecC
Confidence                       777888899999999999998753

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=100.00  E-value=4e-35  Score=248.47  Aligned_cols=232  Identities=20%  Similarity=0.203  Sum_probs=174.6

Q ss_pred             CCCCCcEEEEEcCccHHHHHHHHHHHHCC--CeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCC--
Q 025755            2 SGEDKERVCVTGAGGYIASWLVKYLLLKG--YMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAG--   77 (248)
Q Consensus         2 ~~l~~k~vlVtG~~g~iG~~~~~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~--   77 (248)
                      +++++|+||||||+|+||++++++|+++|  ++|++.+|.........+..+. ..+++.++.+|++|.+++.+++++  
T Consensus        20 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~~   98 (346)
T 4egb_A           20 FQSNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQ-DHPNYYFVKGEIQNGELLEHVIKERD   98 (346)
T ss_dssp             ----CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTTTT-TCTTEEEEECCTTCHHHHHHHHHHHT
T ss_pred             cccCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhhhc-cCCCeEEEEcCCCCHHHHHHHHhhcC
Confidence            34678999999999999999999999999  7788877765322222222221 235899999999999999999987  


Q ss_pred             CCEEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhcc
Q 025755           78 CTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKA  157 (248)
Q Consensus        78 id~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~  157 (248)
                      +|+|||+||..........+..++++|+.++.++++++++.+.++|||+||.. +|+...  ...+++|+++..+     
T Consensus        99 ~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~-vy~~~~--~~~~~~E~~~~~p-----  170 (346)
T 4egb_A           99 VQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPHIKLVQVSTDE-VYGSLG--KTGRFTEETPLAP-----  170 (346)
T ss_dssp             CCEEEECCCCC---------CHHHHHHTHHHHHHHHHHHHSTTSEEEEEEEGG-GGCCCC--SSCCBCTTSCCCC-----
T ss_pred             CCEEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCchH-HhCCCC--cCCCcCCCCCCCC-----
Confidence            99999999987665445666889999999999999999999999999999975 444321  2467788776644     


Q ss_pred             ccchHHHHHHHHHHHHHHHHHhCCccEEEEccCeeecCCCCCCCCccHHHHHHHHcCCCCCCCCCchhhhhhhhhcccee
Q 025755          158 TENYYCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKGFFFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       158 ~~~~Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                       .+.|+.+|..+|.++..++.+++++++++||+++|||..... .....++..+..+..+....++....+.+++|+...
T Consensus       171 -~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~  248 (346)
T 4egb_A          171 -NSPYSSSKASADMIALAYYKTYQLPVIVTRCSNNYGPYQYPE-KLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHCS  248 (346)
T ss_dssp             -CSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTT-SHHHHHHHHHHTTCCCEEETTSCCEECEEEHHHHHH
T ss_pred             -CChhHHHHHHHHHHHHHHHHHhCCCEEEEeecceeCcCCCcc-chHHHHHHHHHcCCCceeeCCCCeEEeeEEHHHHHH
Confidence             456999999999999999988789999999999999987543 456677888888876655555555566788888776


Q ss_pred             EEEeecc
Q 025755          238 LYRCKIQ  244 (248)
Q Consensus       238 ~~~~~~~  244 (248)
                      ++..++.
T Consensus       249 a~~~~~~  255 (346)
T 4egb_A          249 AIDVVLH  255 (346)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHh
Confidence            6555443

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=100.00  E-value=5.9e-35  Score=236.61  Aligned_cols=209  Identities=18%  Similarity=0.208  Sum_probs=160.6

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-------
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-------   76 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-------   76 (248)
                      +++|+++||||+||||++++++|+++|++|++++++..+......+.+.....++.++++|++|.++++++++       
T Consensus         2 l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   81 (246)
T 3osu_A            2 KMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFG   81 (246)
T ss_dssp             CCSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            6789999999999999999999999999999998865433334444444445688999999999999988876       


Q ss_pred             CCCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHH----hcCCCEEEEEeccceeccCCCCCCCCccCCCC
Q 025755           77 GCTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCV----KAKVKRVVVVSSIGAVMLNPNWPKGQVMDEEC  148 (248)
Q Consensus        77 ~id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~----~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~  148 (248)
                      ++|+||||||.......    .+.|+..+++|+.++.++++++.    +.+.++||++||..+..+.+..          
T Consensus        82 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~----------  151 (246)
T 3osu_A           82 SLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQ----------  151 (246)
T ss_dssp             CCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTC----------
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCCCC----------
Confidence            78999999998654322    23456789999999999999884    4567899999998877766543          


Q ss_pred             CCchhhhccccchHHHHHHHHHHHH----HHHHHhCCccEEEEccCeeecCCCCCCCCccHHHHHHHHcCC---------
Q 025755          149 WSDEEFCKATENYYCLAKTIAEIQA----LEYAKRGELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKGF---------  215 (248)
Q Consensus       149 ~~~~~~~~~~~~~Y~~sK~~~e~l~----~~~~~~~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~~~---------  215 (248)
                                 ..|+.||+..+.+.    .+++++ |+++|+|+||.+++|+....   .......+..+.         
T Consensus       152 -----------~~Y~~sK~a~~~~~~~la~e~~~~-gi~vn~v~PG~v~t~~~~~~---~~~~~~~~~~~~p~~r~~~~~  216 (246)
T 3osu_A          152 -----------ANYVATKAGVIGLTKSAARELASR-GITVNAVAPGFIVSDMTDAL---SDELKEQMLTQIPLARFGQDT  216 (246)
T ss_dssp             -----------HHHHHHHHHHHHHHHHHHHHHGGG-TEEEEEEEECSBGGGCCSCS---CHHHHHHHHTTCTTCSCBCHH
T ss_pred             -----------hHHHHHHHHHHHHHHHHHHHhccc-CeEEEEEEECCCcCCccccc---CHHHHHHHHhcCCCCCCcCHH
Confidence                       33999998555554    444444 59999999999999986542   223333332221         


Q ss_pred             -------CCCCCCCchhhhhhhhhcccee
Q 025755          216 -------FFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       216 -------~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                             ++.++...|+||+++.||||..
T Consensus       217 dva~~v~~l~s~~~~~itG~~i~vdgG~~  245 (246)
T 3osu_A          217 DIANTVAFLASDKAKYITGQTIHVNGGMY  245 (246)
T ss_dssp             HHHHHHHHHTSGGGTTCCSCEEEESTTSC
T ss_pred             HHHHHHHHHhCccccCCCCCEEEeCCCcc
Confidence                   6777788999999999999974

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=100.00  E-value=1e-34  Score=238.46  Aligned_cols=215  Identities=16%  Similarity=0.136  Sum_probs=161.3

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC------
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA------   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~------   76 (248)
                      ++++|+++||||+||||++++++|+++|++|++++++..+......+.+.....++.++.+|++|.++++++++      
T Consensus        28 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  107 (271)
T 3v2g_A           28 SLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEAL  107 (271)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            37899999999999999999999999999999998776443344444444446789999999999999988876      


Q ss_pred             -CCCEEEEccccCCCCC----CCCccccchhhhHHHHHHHHHHHHhc--CCCEEEEEeccceecc-CCCCCCCCccCCCC
Q 025755           77 -GCTGVFHVACPVPVGK----VPNPEVQLIDPAVVGTKNVLNSCVKA--KVKRVVVVSSIGAVML-NPNWPKGQVMDEEC  148 (248)
Q Consensus        77 -~id~vi~~ag~~~~~~----~~~~~~~~~~~n~~g~~~~~~~~~~~--~~~~iV~vSS~~~~~~-~~~~~~~~~~~e~~  148 (248)
                       ++|+||||||......    ..+.|+..+++|+.++.++++++.+.  +.++||++||..+..+ .+.           
T Consensus       108 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~~~~~~~~~~-----------  176 (271)
T 3v2g_A          108 GGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSNLAELVPWPG-----------  176 (271)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCGGGTCCCSTT-----------
T ss_pred             CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeChhhccCCCCC-----------
Confidence             7899999999865432    23456778999999999999999876  4579999999655433 222           


Q ss_pred             CCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCCCccHHHHHHHHcCC----------
Q 025755          149 WSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKGF----------  215 (248)
Q Consensus       149 ~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~~~----------  215 (248)
                                ...|+.||++.+.+.+.++.+   .|++||+|+||.+.+|+.................++          
T Consensus       177 ----------~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~  246 (271)
T 3v2g_A          177 ----------ISLYSASKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDMNPADGDHAEAQRERIATGSYGEPQDIAGL  246 (271)
T ss_dssp             ----------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSSSCSSCSSHHHHHHTCTTSSCBCHHHHHHH
T ss_pred             ----------chHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCcccccchhHHHHHhcCCCCCCCCHHHHHHH
Confidence                      234999997555554444433   259999999999999986543222222222222221          


Q ss_pred             --CCCCCCCchhhhhhhhhccceeE
Q 025755          216 --FFTTPSHSYMLERTLVLNQGVRL  238 (248)
Q Consensus       216 --~l~~~~~~~~~g~~l~vd~g~~~  238 (248)
                        |+.++.+.|+||+++.||||+.+
T Consensus       247 v~fL~s~~~~~itG~~i~vdGG~~a  271 (271)
T 3v2g_A          247 VAWLAGPQGKFVTGASLTIDGGANA  271 (271)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTTTC
T ss_pred             HHHHhCcccCCccCCEEEeCcCccC
Confidence              77788889999999999999753

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.3e-34  Score=238.81  Aligned_cols=217  Identities=16%  Similarity=0.178  Sum_probs=148.8

Q ss_pred             CCCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-----
Q 025755            2 SGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-----   76 (248)
Q Consensus         2 ~~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-----   76 (248)
                      .++++|+++||||+||||+++++.|+++|++|++++|+..+......+.+.....++.++++|++|.++++++++     
T Consensus        25 ~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  104 (280)
T 4da9_A           25 TQKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAE  104 (280)
T ss_dssp             SCCCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHH
T ss_pred             hccCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            347789999999999999999999999999999999755443344444444446789999999999999888876     


Q ss_pred             --CCCEEEEccccCC--CCC----CCCccccchhhhHHHHHHHHHHHHhc----C---CCEEEEEeccceeccCCCCCCC
Q 025755           77 --GCTGVFHVACPVP--VGK----VPNPEVQLIDPAVVGTKNVLNSCVKA----K---VKRVVVVSSIGAVMLNPNWPKG  141 (248)
Q Consensus        77 --~id~vi~~ag~~~--~~~----~~~~~~~~~~~n~~g~~~~~~~~~~~----~---~~~iV~vSS~~~~~~~~~~~~~  141 (248)
                        ++|+||||||...  ...    ..+.|..++++|+.++.++++++.+.    +   .++||++||..+..+.+..   
T Consensus       105 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~---  181 (280)
T 4da9_A          105 FGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMTSPER---  181 (280)
T ss_dssp             HSCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC-------CC---
T ss_pred             cCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhccCCCCc---
Confidence              7899999999842  211    23456778999999999888887654    3   5799999998877665443   


Q ss_pred             CccCCCCCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCCCccHHHH-H-HHHcCC-
Q 025755          142 QVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTINTSSLLL-L-GFLKGF-  215 (248)
Q Consensus       142 ~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~~~~~~~~-~-~~~~~~-  215 (248)
                                        ..|+.||++.+.+.+.++.+   .+++||+|+||.+.+|+............ . ....++ 
T Consensus       182 ------------------~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~r~  243 (280)
T 4da9_A          182 ------------------LDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTAAVSGKYDGLIESGLVPMRRW  243 (280)
T ss_dssp             ------------------HHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC----------------------CC
T ss_pred             ------------------cHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchhhcchhHHHHHhhcCCCcCCc
Confidence                              23999998666666555543   46999999999999997643211110000 0 011111 


Q ss_pred             -----------CCCCCCCchhhhhhhhhccceeEE
Q 025755          216 -----------FFTTPSHSYMLERTLVLNQGVRLY  239 (248)
Q Consensus       216 -----------~l~~~~~~~~~g~~l~vd~g~~~~  239 (248)
                                 ++.++.+.|+||+++.||||+.+.
T Consensus       244 ~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~~  278 (280)
T 4da9_A          244 GEPEDIGNIVAGLAGGQFGFATGSVIQADGGLSIG  278 (280)
T ss_dssp             BCHHHHHHHHHHHHTSTTGGGTTCEEEESTTCC--
T ss_pred             CCHHHHHHHHHHHhCccccCCCCCEEEECCCcccC
Confidence                       788888999999999999998753

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=100.00  E-value=1.3e-34  Score=240.29  Aligned_cols=213  Identities=20%  Similarity=0.242  Sum_probs=159.9

Q ss_pred             CCCCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCC-CCeEEEEccCCCHHHHHHHhC---
Q 025755            1 MSGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGAS-ENLQLFKTDLLDYEALCAATA---   76 (248)
Q Consensus         1 m~~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~Di~d~~~~~~~~~---   76 (248)
                      |.++++|++|||||+||||+++++.|+++|++|++++|+... .....+.+.... .++.++.+|++|.++++++++   
T Consensus        36 m~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~-~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~  114 (293)
T 3rih_A           36 MFDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRE-LSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVV  114 (293)
T ss_dssp             TTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGG-GHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHH-HHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHH
Confidence            455789999999999999999999999999999999998753 333334444433 579999999999999888765   


Q ss_pred             ----CCCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHH----hcCCCEEEEEecccee-ccCCCCCCCCc
Q 025755           77 ----GCTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCV----KAKVKRVVVVSSIGAV-MLNPNWPKGQV  143 (248)
Q Consensus        77 ----~id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~----~~~~~~iV~vSS~~~~-~~~~~~~~~~~  143 (248)
                          ++|+||||||.......    .+.|+..+++|+.|+.++++++.    +.+.++||++||..+. .+.+..     
T Consensus       115 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~~~~~~~~~~~-----  189 (293)
T 3rih_A          115 DAFGALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVTGYPGW-----  189 (293)
T ss_dssp             HHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSCEEEEECCSBTTTBBCTTC-----
T ss_pred             HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEeChhhccCCCCCC-----
Confidence                67999999998754322    24456789999999999999884    4567899999997764 444332     


Q ss_pred             cCCCCCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCCCccHHHHHHHHcCC-----
Q 025755          144 MDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKGF-----  215 (248)
Q Consensus       144 ~~e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~~~-----  215 (248)
                                      ..|+.||++.+.+.+.++.+   .||+||+|+||.++||+....   ...+...+....     
T Consensus       190 ----------------~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~---~~~~~~~~~~~~p~~r~  250 (293)
T 3rih_A          190 ----------------SHYGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVDM---GEEYISGMARSIPMGML  250 (293)
T ss_dssp             ----------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHT---CHHHHHHHHTTSTTSSC
T ss_pred             ----------------HHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchhhc---cHHHHHHHHhcCCCCCC
Confidence                            34999997555555554433   259999999999999864321   122222222111     


Q ss_pred             -----------CCCCCCCchhhhhhhhhccceeE
Q 025755          216 -----------FFTTPSHSYMLERTLVLNQGVRL  238 (248)
Q Consensus       216 -----------~l~~~~~~~~~g~~l~vd~g~~~  238 (248)
                                 |+.++.+.|+||+++.||||..+
T Consensus       251 ~~p~dvA~~v~fL~s~~a~~itG~~i~vdGG~~~  284 (293)
T 3rih_A          251 GSPVDIGHLAAFLATDEAGYITGQAIVVDGGQVL  284 (293)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTC
T ss_pred             CCHHHHHHHHHHHhCccccCCCCCEEEECCCccC
Confidence                       77788889999999999999764

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=100.00  E-value=3e-34  Score=237.00  Aligned_cols=214  Identities=20%  Similarity=0.160  Sum_probs=159.7

Q ss_pred             CCCCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC----
Q 025755            1 MSGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA----   76 (248)
Q Consensus         1 m~~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~----   76 (248)
                      |+++++|++|||||+||||+++++.|+++|++|++++|+... .....+.+.....++.++++|++|.++++++++    
T Consensus        23 m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~-~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  101 (283)
T 3v8b_A           23 MMNQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTE-VEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVL  101 (283)
T ss_dssp             ----CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHH-HHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             hcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            455788999999999999999999999999999999998642 333444455556789999999999999888876    


Q ss_pred             ---CCCEEEEccccCCC-CC----CCCccccchhhhHHHHHHHHHHHH----hcCCCEEEEEeccceec--cCCCCCCCC
Q 025755           77 ---GCTGVFHVACPVPV-GK----VPNPEVQLIDPAVVGTKNVLNSCV----KAKVKRVVVVSSIGAVM--LNPNWPKGQ  142 (248)
Q Consensus        77 ---~id~vi~~ag~~~~-~~----~~~~~~~~~~~n~~g~~~~~~~~~----~~~~~~iV~vSS~~~~~--~~~~~~~~~  142 (248)
                         ++|+||||||.... ..    ..+.|+..+++|+.|+.++++++.    +.+.++||++||..+..  +.+.     
T Consensus       102 ~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~-----  176 (283)
T 3v8b_A          102 KFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRTFTTPG-----  176 (283)
T ss_dssp             HHSCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCSTT-----
T ss_pred             HhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCceEEEEcChhhccCCCCCC-----
Confidence               68999999997543 11    123456789999999999988884    45678999999987654  2222     


Q ss_pred             ccCCCCCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCCCc----------------
Q 025755          143 VMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTINT----------------  203 (248)
Q Consensus       143 ~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~~~----------------  203 (248)
                                      ...|+.||++.+.+.+.++.+   .||+||+|+||.+.+++.......                
T Consensus       177 ----------------~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~  240 (283)
T 3v8b_A          177 ----------------ATAYTATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNTKLRHEEETAIPVEWPKGQV  240 (283)
T ss_dssp             ----------------CHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCCTTBCCHHHHSCCCBCTTCSC
T ss_pred             ----------------chHHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCcccccccccchhhhhhhhhhhhcC
Confidence                            234999998777777666654   369999999999999976532110                


Q ss_pred             --------cHHHHHHHHcCCCCCCCCCchhhhhhhhhccceeE
Q 025755          204 --------SSLLLLGFLKGFFFTTPSHSYMLERTLVLNQGVRL  238 (248)
Q Consensus       204 --------~~~~~~~~~~~~~l~~~~~~~~~g~~l~vd~g~~~  238 (248)
                              .+.-+.....  |+.++.+.|+||+++.||||+.+
T Consensus       241 p~~~~r~~~pedvA~~v~--fL~s~~a~~itG~~i~vdGG~~~  281 (283)
T 3v8b_A          241 PITDGQPGRSEDVAELIR--FLVSERARHVTGSPVWIDGGQGL  281 (283)
T ss_dssp             GGGTTCCBCHHHHHHHHH--HHTSGGGTTCCSCEEEESTTHHH
T ss_pred             ccccCCCCCHHHHHHHHH--HHcCccccCCcCCEEEECcCccc
Confidence                    0111111111  78888889999999999999764

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=100.00  E-value=5.8e-34  Score=233.94  Aligned_cols=207  Identities=16%  Similarity=0.085  Sum_probs=157.6

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC------
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA------   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~------   76 (248)
                      ++++|+++||||+||||++++++|+++|++|++++|+..... ...+.+   ..++.++.+|++|.++++++++      
T Consensus         8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~-~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   83 (271)
T 3tzq_B            8 ELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLA-GAAASV---GRGAVHHVVDLTNEVSVRALIDFTIDTF   83 (271)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHH-HHHHHH---CTTCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHH-HHHHHh---CCCeEEEECCCCCHHHHHHHHHHHHHHc
Confidence            478999999999999999999999999999999999875432 222333   4578899999999999998876      


Q ss_pred             -CCCEEEEccccCCCC------CCCCccccchhhhHHHHHHHHHHH----HhcCCCEEEEEeccceeccCCCCCCCCccC
Q 025755           77 -GCTGVFHVACPVPVG------KVPNPEVQLIDPAVVGTKNVLNSC----VKAKVKRVVVVSSIGAVMLNPNWPKGQVMD  145 (248)
Q Consensus        77 -~id~vi~~ag~~~~~------~~~~~~~~~~~~n~~g~~~~~~~~----~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~  145 (248)
                       ++|+||||||.....      ...+.|+..+++|+.++.++++++    ++.+.++||++||..++.+.+..       
T Consensus        84 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~-------  156 (271)
T 3tzq_B           84 GRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHAAYDMS-------  156 (271)
T ss_dssp             SCCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSBCSSC-------
T ss_pred             CCCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCHHHcCCCCCC-------
Confidence             789999999986331      122445678999999999999888    45577899999998876665432       


Q ss_pred             CCCCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCCCccHHHHHHHHc----CC---
Q 025755          146 EECWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLK----GF---  215 (248)
Q Consensus       146 e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~----~~---  215 (248)
                                    ..|+.||++.+.+.+.++.+   +|++||+|+||.++||+.....  .......+..    ++   
T Consensus       157 --------------~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~--~~~~~~~~~~~~~~~r~~~  220 (271)
T 3tzq_B          157 --------------TAYACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLEVGL--PQPIVDIFATHHLAGRIGE  220 (271)
T ss_dssp             --------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC-----CHHHHHHHHTTSTTSSCBC
T ss_pred             --------------hHHHHHHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCccccccC--CHHHHHHHHhcCCCCCCcC
Confidence                          33999997666665555544   3699999999999999865321  1222222221    11   


Q ss_pred             ---------CCCCCCCchhhhhhhhhccce
Q 025755          216 ---------FFTTPSHSYMLERTLVLNQGV  236 (248)
Q Consensus       216 ---------~l~~~~~~~~~g~~l~vd~g~  236 (248)
                               ++.++...|+||+++.||||+
T Consensus       221 p~dvA~~v~~L~s~~~~~itG~~i~vdGG~  250 (271)
T 3tzq_B          221 PHEIAELVCFLASDRAAFITGQVIAADSGL  250 (271)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             HHHHHHHHHHHhCcccCCcCCCEEEECCCc
Confidence                     677888899999999999994

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=100.00  E-value=3.3e-34  Score=236.55  Aligned_cols=217  Identities=17%  Similarity=0.082  Sum_probs=160.1

Q ss_pred             CCCCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCc-----------hhhHHhhhhcCCCCCeEEEEccCCCHH
Q 025755            1 MSGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCD-----------EKNAHLKKLEGASENLQLFKTDLLDYE   69 (248)
Q Consensus         1 m~~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~-----------~~~~~~~~~~~~~~~~~~~~~Di~d~~   69 (248)
                      |+++++|+++||||+||||+++++.|+++|++|++++|+...           ......+.+.....++.++++|++|.+
T Consensus         5 m~~l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~   84 (281)
T 3s55_A            5 MADFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRA   84 (281)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHH
T ss_pred             ccccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHH
Confidence            567899999999999999999999999999999999997421           112222233334568999999999999


Q ss_pred             HHHHHhC-------CCCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHHh----cCCCEEEEEeccceecc
Q 025755           70 ALCAATA-------GCTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCVK----AKVKRVVVVSSIGAVML  134 (248)
Q Consensus        70 ~~~~~~~-------~id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~~----~~~~~iV~vSS~~~~~~  134 (248)
                      +++++++       ++|+||||||.......    .+.|+..+++|+.++.++++++.+    .+.++||++||..++.+
T Consensus        85 ~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~  164 (281)
T 3s55_A           85 ALESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSA  164 (281)
T ss_dssp             HHHHHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSC
T ss_pred             HHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhcCC
Confidence            9988876       68999999998654322    244567899999999999888644    46789999999887666


Q ss_pred             CCCCCCCCccCCCCCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCC----------
Q 025755          135 NPNWPKGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTI----------  201 (248)
Q Consensus       135 ~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~----------  201 (248)
                      .+..                     ..|+.||++.+.+.+.++.+   .|++||+|+||+++||+.....          
T Consensus       165 ~~~~---------------------~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~  223 (281)
T 3s55_A          165 NFAQ---------------------ASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLE  223 (281)
T ss_dssp             CTTC---------------------HHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTSSHHHHHC------
T ss_pred             CCCC---------------------chhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccccchhhhcccccccc
Confidence            5432                     33999998666666666654   3699999999999999865310          


Q ss_pred             -CccHHHHH---HH--HcCC------------CCCCCCCchhhhhhhhhccceeE
Q 025755          202 -NTSSLLLL---GF--LKGF------------FFTTPSHSYMLERTLVLNQGVRL  238 (248)
Q Consensus       202 -~~~~~~~~---~~--~~~~------------~l~~~~~~~~~g~~l~vd~g~~~  238 (248)
                       ........   ..  ..++            ++.++...|+||+++.||||..+
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~p~dvA~~v~~L~s~~~~~itG~~i~vdgG~~~  278 (281)
T 3s55_A          224 KPTLKDVESVFASLHLQYAPFLKPEEVTRAVLFLVDEASSHITGTVLPIDAGATA  278 (281)
T ss_dssp             -CCHHHHHHHHHHHCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             ccchhHHHHHHHhhhccCcCCCCHHHHHHHHHHHcCCcccCCCCCEEEECCCccc
Confidence             00000000   00  0011            67777789999999999999764

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=100.00  E-value=8.9e-35  Score=235.84  Aligned_cols=212  Identities=20%  Similarity=0.225  Sum_probs=158.6

Q ss_pred             CCCCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC----
Q 025755            1 MSGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA----   76 (248)
Q Consensus         1 m~~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~----   76 (248)
                      |+++++|+++||||+||||+++++.|+++|++|++++|+... .....+.+   ..+..++++|++|.++++++++    
T Consensus         4 ~~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~-~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~   79 (248)
T 3op4_A            4 FMNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESG-AQAISDYL---GDNGKGMALNVTNPESIEAVLKAITD   79 (248)
T ss_dssp             TTCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHH-HHHHHHHH---GGGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHHh---cccceEEEEeCCCHHHHHHHHHHHHH
Confidence            345789999999999999999999999999999999998642 22222222   2357889999999999988876    


Q ss_pred             ---CCCEEEEccccCCCCC----CCCccccchhhhHHHHHHHHHHHHh----cCCCEEEEEeccceeccCCCCCCCCccC
Q 025755           77 ---GCTGVFHVACPVPVGK----VPNPEVQLIDPAVVGTKNVLNSCVK----AKVKRVVVVSSIGAVMLNPNWPKGQVMD  145 (248)
Q Consensus        77 ---~id~vi~~ag~~~~~~----~~~~~~~~~~~n~~g~~~~~~~~~~----~~~~~iV~vSS~~~~~~~~~~~~~~~~~  145 (248)
                         ++|++|||||......    ..++|+..+++|+.|+.++++++.+    .+.++||++||..+..+.+..       
T Consensus        80 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~-------  152 (248)
T 3op4_A           80 EFGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQ-------  152 (248)
T ss_dssp             HHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTC-------
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCCCC-------
Confidence               7899999999865432    2345677899999999999888765    467899999998877766543       


Q ss_pred             CCCCCchhhhccccchHHHHHH----HHHHHHHHHHHhCCccEEEEccCeeecCCCCCCCCcc-HHHHHHHHcCC-----
Q 025755          146 EECWSDEEFCKATENYYCLAKT----IAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTINTS-SLLLLGFLKGF-----  215 (248)
Q Consensus       146 e~~~~~~~~~~~~~~~Y~~sK~----~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~~~-~~~~~~~~~~~-----  215 (248)
                                    ..|+.||+    +++.++.+++++ |+|||+|+||.+.+++........ .........++     
T Consensus       153 --------------~~Y~asK~a~~~l~~~la~e~~~~-gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~p~~r~~~p~  217 (248)
T 3op4_A          153 --------------ANYAAAKAGVIGFTKSMAREVASR-GVTVNTVAPGFIETDMTKALNDEQRTATLAQVPAGRLGDPR  217 (248)
T ss_dssp             --------------HHHHHHHHHHHHHHHHHHHHHGGG-TEEEEEEEECSBSSTTTTTSCHHHHHHHHHTCTTCSCBCHH
T ss_pred             --------------hHHHHHHHHHHHHHHHHHHHHHHh-CeEEEEEeeCCCCCchhhhcCHHHHHHHHhcCCCCCCcCHH
Confidence                          33999997    555555555554 599999999999999865421110 01111111111     


Q ss_pred             -------CCCCCCCchhhhhhhhhccceeE
Q 025755          216 -------FFTTPSHSYMLERTLVLNQGVRL  238 (248)
Q Consensus       216 -------~l~~~~~~~~~g~~l~vd~g~~~  238 (248)
                             ++.++...|+||+++.||||+.+
T Consensus       218 dva~~v~~L~s~~~~~itG~~i~vdgG~~~  247 (248)
T 3op4_A          218 EIASAVAFLASPEAAYITGETLHVNGGMYM  247 (248)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESTTSSC
T ss_pred             HHHHHHHHHcCCccCCccCcEEEECCCeec
Confidence                   67788889999999999999864

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=100.00  E-value=1.7e-34  Score=245.11  Aligned_cols=231  Identities=17%  Similarity=0.132  Sum_probs=181.8

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCC-----CCCeEEEEccCCCHHHHHHHhCCC
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGA-----SENLQLFKTDLLDYEALCAATAGC   78 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~-----~~~~~~~~~Di~d~~~~~~~~~~i   78 (248)
                      +++|+||||||+|+||++++++|+++|++|++++|+...... ....+...     ..++.++.+|++|.+++.++++++
T Consensus        23 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~  101 (351)
T 3ruf_A           23 FSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQY-NLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKGV  101 (351)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHH-HHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTTTC
T ss_pred             CCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchh-hhhhhhhccccccCCceEEEEccCCCHHHHHHHhcCC
Confidence            567999999999999999999999999999999997643221 11111110     157999999999999999999999


Q ss_pred             CEEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccc
Q 025755           79 TGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKAT  158 (248)
Q Consensus        79 d~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~  158 (248)
                      |+|||+||..........+..++++|+.++.++++++++.+.++|||+||.. +|+...   ..+++|+++..+      
T Consensus       102 d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~-vyg~~~---~~~~~E~~~~~p------  171 (351)
T 3ruf_A          102 DHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAASSS-TYGDHP---ALPKVEENIGNP------  171 (351)
T ss_dssp             SEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGG-GGTTCC---CSSBCTTCCCCC------
T ss_pred             CEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEecHH-hcCCCC---CCCCccCCCCCC------
Confidence            9999999975433223344678999999999999999999999999999976 444432   567788877544      


Q ss_pred             cchHHHHHHHHHHHHHHHHHhCCccEEEEccCeeecCCCCCCC---CccHHHHHHHHcCCCCCCCCCchhhhhhhhhccc
Q 025755          159 ENYYCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTI---NTSSLLLLGFLKGFFFTTPSHSYMLERTLVLNQG  235 (248)
Q Consensus       159 ~~~Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~---~~~~~~~~~~~~~~~l~~~~~~~~~g~~l~vd~g  235 (248)
                      .+.|+.+|..+|.++..++.+++++++++||+++|||......   .....++..+..+..+...+++....+.+++|+.
T Consensus       172 ~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dv  251 (351)
T 3ruf_A          172 LSPYAVTKYVNEIYAQVYARTYGFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDFCYIDNV  251 (351)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHHHCCCCEEEEECSEESTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHH
T ss_pred             CChhHHHHHHHHHHHHHHHHHhCCCEEEEeeCceeCcCCCCCcchhhHHHHHHHHHHcCCCcEEeCCCCeEEeeEEHHHH
Confidence            5669999999999999999887899999999999999876531   3456778888888776665555556678888888


Q ss_pred             eeEEEeeccC
Q 025755          236 VRLYRCKIQI  245 (248)
Q Consensus       236 ~~~~~~~~~~  245 (248)
                      ..++..++..
T Consensus       252 a~a~~~~~~~  261 (351)
T 3ruf_A          252 IQMNILSALA  261 (351)
T ss_dssp             HHHHHHHHTC
T ss_pred             HHHHHHHHhh
Confidence            7776655543

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=100.00  E-value=7.4e-35  Score=240.31  Aligned_cols=221  Identities=14%  Similarity=0.015  Sum_probs=160.7

Q ss_pred             CCCCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC----
Q 025755            1 MSGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA----   76 (248)
Q Consensus         1 m~~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~----   76 (248)
                      |.++++|++|||||+||||+++++.|+++|++|++++|+... .....+.+.....++.++.+|++|.++++++++    
T Consensus         3 m~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   81 (280)
T 3tox_A            3 MSRLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNA-LAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVR   81 (280)
T ss_dssp             -CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHH-HHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHH-HHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            445789999999999999999999999999999999998642 333344454456789999999999999888876    


Q ss_pred             ---CCCEEEEccccCCCC-----CCCCccccchhhhHHHHHHHHHHHHh----cCCCEEEEEecccee-ccCCCCCCCCc
Q 025755           77 ---GCTGVFHVACPVPVG-----KVPNPEVQLIDPAVVGTKNVLNSCVK----AKVKRVVVVSSIGAV-MLNPNWPKGQV  143 (248)
Q Consensus        77 ---~id~vi~~ag~~~~~-----~~~~~~~~~~~~n~~g~~~~~~~~~~----~~~~~iV~vSS~~~~-~~~~~~~~~~~  143 (248)
                         ++|+||||||.....     ...+.+...+++|+.|+.++++++.+    .+.++||++||..++ .+.+.      
T Consensus        82 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~------  155 (280)
T 3tox_A           82 RFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTAGFAG------  155 (280)
T ss_dssp             HHSCCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTTTBCCTT------
T ss_pred             HcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhCcCCCCC------
Confidence               689999999976331     12344577899999999998888754    356899999997765 33332      


Q ss_pred             cCCCCCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCC-CccHHHHHHHHcC----C
Q 025755          144 MDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTI-NTSSLLLLGFLKG----F  215 (248)
Q Consensus       144 ~~e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~-~~~~~~~~~~~~~----~  215 (248)
                                     ...|+.||++.+.+.+.++.+   .||+||+|+||.+.+|+..... ...+.....+...    +
T Consensus       156 ---------------~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~r  220 (280)
T 3tox_A          156 ---------------VAPYAASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFANLPGAAPETRGFVEGLHALKR  220 (280)
T ss_dssp             ---------------CHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGGGSTTCCTHHHHHHHTTSTTSS
T ss_pred             ---------------chhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhhhccccCHHHHHHHhccCccCC
Confidence                           234999997655555555443   2699999999999999754311 1111111111111    1


Q ss_pred             ------------CCCCCCCchhhhhhhhhccceeEEEeec
Q 025755          216 ------------FFTTPSHSYMLERTLVLNQGVRLYRCKI  243 (248)
Q Consensus       216 ------------~l~~~~~~~~~g~~l~vd~g~~~~~~~~  243 (248)
                                  ++.++...|+||+++.||||..+...++
T Consensus       221 ~~~pedvA~~v~~L~s~~a~~itG~~i~vdGG~~~~~~a~  260 (280)
T 3tox_A          221 IARPEEIAEAALYLASDGASFVTGAALLADGGASVTKAAE  260 (280)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCC---
T ss_pred             CcCHHHHHHHHHHHhCccccCCcCcEEEECCCcccccccc
Confidence                        6778888999999999999987655443

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=100.00  E-value=1.7e-34  Score=235.37  Aligned_cols=215  Identities=12%  Similarity=0.080  Sum_probs=159.5

Q ss_pred             CCCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-----
Q 025755            2 SGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-----   76 (248)
Q Consensus         2 ~~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-----   76 (248)
                      ..|++|++|||||+||||+++++.|+++|++|++++|+.+. .....+.+.....++.++.+|++|.++++++++     
T Consensus         2 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   80 (257)
T 3imf_A            2 NAMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEK-LEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEK   80 (257)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHH-HHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999998642 333344444556789999999999999888876     


Q ss_pred             --CCCEEEEccccCCCCC----CCCccccchhhhHHHHHHHHHHHHh-----cCCCEEEEEeccceeccCCCCCCCCccC
Q 025755           77 --GCTGVFHVACPVPVGK----VPNPEVQLIDPAVVGTKNVLNSCVK-----AKVKRVVVVSSIGAVMLNPNWPKGQVMD  145 (248)
Q Consensus        77 --~id~vi~~ag~~~~~~----~~~~~~~~~~~n~~g~~~~~~~~~~-----~~~~~iV~vSS~~~~~~~~~~~~~~~~~  145 (248)
                        ++|+||||||......    ..+.|+..+++|+.++.++++++.+     .+.++||++||..+..+.+..       
T Consensus        81 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-------  153 (257)
T 3imf_A           81 FGRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDAGPGV-------  153 (257)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSCCTTC-------
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhccCCCCc-------
Confidence              6899999999755432    1244567899999999999888843     346899999998877665432       


Q ss_pred             CCCCCchhhhccccchHHHHHHH----HHHHHHHHHHhCCccEEEEccCeeecCCCCCCC----CccHHHHHHHHcCC--
Q 025755          146 EECWSDEEFCKATENYYCLAKTI----AEIQALEYAKRGELDIVTVCPSIVIGPMLQPTI----NTSSLLLLGFLKGF--  215 (248)
Q Consensus       146 e~~~~~~~~~~~~~~~Y~~sK~~----~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~----~~~~~~~~~~~~~~--  215 (248)
                                    ..|+.||+.    ++.++.+++++.|+|||+|+||.+++|+.....    .....+......++  
T Consensus       154 --------------~~Y~asKaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~~r~~  219 (257)
T 3imf_A          154 --------------IHSAAAKAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWISEEMAKRTIQSVPLGRLG  219 (257)
T ss_dssp             --------------HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC-------CCSHHHHTTSTTCSCB
T ss_pred             --------------HHHHHHHHHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcchhhcccCHHHHHHHHhcCCCCCCc
Confidence                          239999974    555555665344699999999999998643211    11111111111111  


Q ss_pred             ----------CCCCCCCchhhhhhhhhccceeE
Q 025755          216 ----------FFTTPSHSYMLERTLVLNQGVRL  238 (248)
Q Consensus       216 ----------~l~~~~~~~~~g~~l~vd~g~~~  238 (248)
                                ++.++.+.|+||+++.||||..+
T Consensus       220 ~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~  252 (257)
T 3imf_A          220 TPEEIAGLAYYLCSDEAAYINGTCMTMDGGQHL  252 (257)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTS
T ss_pred             CHHHHHHHHHHHcCchhcCccCCEEEECCCccc
Confidence                      67788889999999999999764

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.2e-34  Score=239.15  Aligned_cols=216  Identities=15%  Similarity=0.160  Sum_probs=154.4

Q ss_pred             CCCCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCC-CCCeEEEEccCCCHHHHHHHhC---
Q 025755            1 MSGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGA-SENLQLFKTDLLDYEALCAATA---   76 (248)
Q Consensus         1 m~~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Di~d~~~~~~~~~---   76 (248)
                      |+++++|++|||||+||||++++++|+++|++|++++|+..+......+.+... ..++.++.+|++|.++++++++   
T Consensus        20 ~~~l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   99 (281)
T 3v2h_A           20 FQSMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVA   99 (281)
T ss_dssp             --CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHH
T ss_pred             hhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHH
Confidence            456889999999999999999999999999999999996543333333344332 4679999999999999988876   


Q ss_pred             ----CCCEEEEccccCCCCC----CCCccccchhhhHHHHHHHHHHHH----hcCCCEEEEEeccceeccCCCCCCCCcc
Q 025755           77 ----GCTGVFHVACPVPVGK----VPNPEVQLIDPAVVGTKNVLNSCV----KAKVKRVVVVSSIGAVMLNPNWPKGQVM  144 (248)
Q Consensus        77 ----~id~vi~~ag~~~~~~----~~~~~~~~~~~n~~g~~~~~~~~~----~~~~~~iV~vSS~~~~~~~~~~~~~~~~  144 (248)
                          ++|+||||||......    ..+.|+..+++|+.++.++++++.    +.+.++||++||..++.+.+..      
T Consensus       100 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~------  173 (281)
T 3v2h_A          100 DRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLVASPFK------  173 (281)
T ss_dssp             HHTSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTC------
T ss_pred             HHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCcccccCCCCc------
Confidence                6899999999865442    234456789999999999988874    4466899999998877665432      


Q ss_pred             CCCCCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCCCcc--------HHHHHH-HH
Q 025755          145 DEECWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTINTS--------SLLLLG-FL  212 (248)
Q Consensus       145 ~e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~~~~--------~~~~~~-~~  212 (248)
                                     ..|+.||++.+.+.+.++.+   .|++||+|+||.+++|+........        ...... +.
T Consensus       174 ---------------~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (281)
T 3v2h_A          174 ---------------SAYVAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVML  238 (281)
T ss_dssp             ---------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC---------------------------
T ss_pred             ---------------hHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhhhcchhhhhcCCCHHHHHHHHHH
Confidence                           33999997555555554433   2599999999999999754321100        000000 11


Q ss_pred             c----CC------------CCCCCCCchhhhhhhhhcccee
Q 025755          213 K----GF------------FFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       213 ~----~~------------~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                      .    ++            ++.++.+.|+||+++.||||+.
T Consensus       239 ~~~p~~r~~~~edvA~~v~~L~s~~a~~itG~~i~vdGG~~  279 (281)
T 3v2h_A          239 KGQPTKKFITVEQVASLALYLAGDDAAQITGTHVSMDGGWT  279 (281)
T ss_dssp             -CCTTCSCBCHHHHHHHHHHHHSSGGGGCCSCEEEESTTGG
T ss_pred             hcCCCCCccCHHHHHHHHHHHcCCCcCCCCCcEEEECCCcc
Confidence            1    11            7778888999999999999975

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=100.00  E-value=1.1e-34  Score=236.14  Aligned_cols=203  Identities=16%  Similarity=0.154  Sum_probs=152.7

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC------
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA------   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~------   76 (248)
                      +|+||++|||||++|||+++++.|+++|++|++++|+..+.           ..+..++++|++|.++++++++      
T Consensus         8 ~L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~-----------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   76 (261)
T 4h15_A            8 NLRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEG-----------LPEELFVEADLTTKEGCAIVAEATRQRL   76 (261)
T ss_dssp             CCTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTT-----------SCTTTEEECCTTSHHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhC-----------CCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            57899999999999999999999999999999999986421           1223468899999999888765      


Q ss_pred             -CCCEEEEccccCCCC------CCCCccccchhhhHHHHHHHHHHHH----hcCCCEEEEEeccceeccCCCCCCCCccC
Q 025755           77 -GCTGVFHVACPVPVG------KVPNPEVQLIDPAVVGTKNVLNSCV----KAKVKRVVVVSSIGAVMLNPNWPKGQVMD  145 (248)
Q Consensus        77 -~id~vi~~ag~~~~~------~~~~~~~~~~~~n~~g~~~~~~~~~----~~~~~~iV~vSS~~~~~~~~~~~~~~~~~  145 (248)
                       ++|++|||||.....      ...++|+..+++|+.++.++.+++.    +.+.++||++||..+..+.+..       
T Consensus        77 G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~~~~~~~~-------  149 (261)
T 4h15_A           77 GGVDVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQRVLPLPES-------  149 (261)
T ss_dssp             SSCSEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTT-------
T ss_pred             CCCCEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhhccCCCCc-------
Confidence             589999999975432      1134567889999999877777665    4477899999998876654321       


Q ss_pred             CCCCCchhhhccccchHHHHHH----HHHHHHHHHHHhCCccEEEEccCeeecCCCCCC-----------CCccHHHHHH
Q 025755          146 EECWSDEEFCKATENYYCLAKT----IAEIQALEYAKRGELDIVTVCPSIVIGPMLQPT-----------INTSSLLLLG  210 (248)
Q Consensus       146 e~~~~~~~~~~~~~~~Y~~sK~----~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~-----------~~~~~~~~~~  210 (248)
                                   ..+|+.||+    +++.++.++++++ ||||+|+||.+.+|+....           ..........
T Consensus       150 -------------~~~Y~asKaal~~lt~~lA~Ela~~g-IrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (261)
T 4h15_A          150 -------------TTAYAAAKAALSTYSKAMSKEVSPKG-VRVVRVSPGWIETEASVRLAERLAKQAGTDLEGGKKIIMD  215 (261)
T ss_dssp             -------------CHHHHHHHHHHHHHHHHHHHHHGGGT-EEEEEEEECCBCCHHHHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred             -------------cHHHHHHHHHHHHHHHHHHHHhhhhC-eEEEEEeCCCcCCcchhhhhHHHHHhhccchhhHHHHHHH
Confidence                         134999995    7788888888765 9999999999999853210           0011111222


Q ss_pred             HHc----CC------------CCCCCCCchhhhhhhhhcccee
Q 025755          211 FLK----GF------------FFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       211 ~~~----~~------------~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                      ...    ++            ||.++.+.|+||+.|.||||+-
T Consensus       216 ~~~~~PlgR~g~peevA~~v~fLaS~~a~~itG~~i~VDGG~v  258 (261)
T 4h15_A          216 GLGGIPLGRPAKPEEVANLIAFLASDRAASITGAEYTIDGGTV  258 (261)
T ss_dssp             HTTCCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTCS
T ss_pred             HhcCCCCCCCcCHHHHHHHHHHHhCchhcCccCcEEEECCcCc
Confidence            111    11            8889999999999999999973

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=100.00  E-value=4.7e-34  Score=235.56  Aligned_cols=215  Identities=16%  Similarity=0.113  Sum_probs=158.9

Q ss_pred             CCCCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCC------------CchhhHHhhhhcCCCCCeEEEEccCCCH
Q 025755            1 MSGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDP------------CDEKNAHLKKLEGASENLQLFKTDLLDY   68 (248)
Q Consensus         1 m~~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~------------~~~~~~~~~~~~~~~~~~~~~~~Di~d~   68 (248)
                      |.++++|+++||||+||||++++++|+++|++|++++|+.            .+......+.+.....++.++.+|++|.
T Consensus        10 ~~~l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~   89 (280)
T 3pgx_A           10 AGSLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDD   89 (280)
T ss_dssp             -CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCH
T ss_pred             ccccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCH
Confidence            4468899999999999999999999999999999999842            1122233334444567899999999999


Q ss_pred             HHHHHHhC-------CCCEEEEccccCCCCC----CCCccccchhhhHHHHHHHHHHHHhc----C-CCEEEEEecccee
Q 025755           69 EALCAATA-------GCTGVFHVACPVPVGK----VPNPEVQLIDPAVVGTKNVLNSCVKA----K-VKRVVVVSSIGAV  132 (248)
Q Consensus        69 ~~~~~~~~-------~id~vi~~ag~~~~~~----~~~~~~~~~~~n~~g~~~~~~~~~~~----~-~~~iV~vSS~~~~  132 (248)
                      ++++++++       ++|+||||||......    ..+.|+..+++|+.++.++++++.+.    + .++||++||..++
T Consensus        90 ~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~  169 (280)
T 3pgx_A           90 AALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGL  169 (280)
T ss_dssp             HHHHHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGT
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchhhc
Confidence            99988876       6899999999865432    23445678999999999998887543    3 5799999998877


Q ss_pred             ccCCCCCCCCccCCCCCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCC--------
Q 025755          133 MLNPNWPKGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTI--------  201 (248)
Q Consensus       133 ~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~--------  201 (248)
                      .+.+..                     ..|+.||++.+.+.+.++.+   .|++||+|+||.+++|+.....        
T Consensus       170 ~~~~~~---------------------~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~  228 (280)
T 3pgx_A          170 KATPGN---------------------GHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEPEAMMEIFARH  228 (280)
T ss_dssp             SCCTTB---------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCHHHHHHHHHHC
T ss_pred             cCCCCc---------------------hhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcccchhhhhhhhhcC
Confidence            665432                     33999997665555555443   3699999999999999864210        


Q ss_pred             -C---------------ccHHHHHHHHcCCCCCCCCCchhhhhhhhhccceeE
Q 025755          202 -N---------------TSSLLLLGFLKGFFFTTPSHSYMLERTLVLNQGVRL  238 (248)
Q Consensus       202 -~---------------~~~~~~~~~~~~~~l~~~~~~~~~g~~l~vd~g~~~  238 (248)
                       .               ..+.-+.....  |+.++...|+||+++.||||...
T Consensus       229 ~~~~~~~~~~~~~~~r~~~p~dvA~~v~--~L~s~~~~~itG~~i~vdGG~~~  279 (280)
T 3pgx_A          229 PSFVHSFPPMPVQPNGFMTADEVADVVA--WLAGDGSGTLTGTQIPVDKGALK  279 (280)
T ss_dssp             GGGGGGSCCBTTBCSSCBCHHHHHHHHH--HHHSGGGTTCSSCEEEESTTGGG
T ss_pred             chhhhhhhhcccCCCCCCCHHHHHHHHH--HHhCccccCCCCCEEEECCCccC
Confidence             0               01111111111  77788889999999999999753

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=100.00  E-value=2.3e-34  Score=238.70  Aligned_cols=213  Identities=13%  Similarity=0.089  Sum_probs=160.9

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC------
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA------   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~------   76 (248)
                      ++++|++|||||+||||++++++|+++|++|++++|+.........+.......++.++.+|++|.++++++++      
T Consensus        44 ~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  123 (291)
T 3ijr_A           44 KLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQL  123 (291)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            36789999999999999999999999999999999987433333333344446789999999999999888876      


Q ss_pred             -CCCEEEEccccCCCCC-----CCCccccchhhhHHHHHHHHHHHHhc--CCCEEEEEeccceeccCCCCCCCCccCCCC
Q 025755           77 -GCTGVFHVACPVPVGK-----VPNPEVQLIDPAVVGTKNVLNSCVKA--KVKRVVVVSSIGAVMLNPNWPKGQVMDEEC  148 (248)
Q Consensus        77 -~id~vi~~ag~~~~~~-----~~~~~~~~~~~n~~g~~~~~~~~~~~--~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~  148 (248)
                       ++|+||||||......     ..+.|...+++|+.++.++++++.+.  +.++||++||..++.+.+..          
T Consensus       124 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~----------  193 (291)
T 3ijr_A          124 GSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIVAYEGNETL----------  193 (291)
T ss_dssp             SSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTHHHHCCTTC----------
T ss_pred             CCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechHhcCCCCCC----------
Confidence             6899999999764321     23456788999999999999999876  45799999998877765442          


Q ss_pred             CCchhhhccccchHHHHHHHHHHHHHHHHHhC---CccEEEEccCeeecCCCCCCCCccHHHHHHHHcC----C------
Q 025755          149 WSDEEFCKATENYYCLAKTIAEIQALEYAKRG---ELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKG----F------  215 (248)
Q Consensus       149 ~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~---~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~~----~------  215 (248)
                                 ..|+.||++.+.+.+.++.++   |++||+|+||.+++|+....  ........+..+    +      
T Consensus       194 -----------~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~--~~~~~~~~~~~~~p~~r~~~p~d  260 (291)
T 3ijr_A          194 -----------IDYSATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSS--FDEKKVSQFGSNVPMQRPGQPYE  260 (291)
T ss_dssp             -----------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTHHHHH--SCHHHHHHTTTTSTTSSCBCGGG
T ss_pred             -----------hhHHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCccccc--CCHHHHHHHHccCCCCCCcCHHH
Confidence                       339999976666655555432   69999999999999864211  011111111111    0      


Q ss_pred             ------CCCCCCCchhhhhhhhhccceeE
Q 025755          216 ------FFTTPSHSYMLERTLVLNQGVRL  238 (248)
Q Consensus       216 ------~l~~~~~~~~~g~~l~vd~g~~~  238 (248)
                            ++.++...|+||+++.||||..+
T Consensus       261 vA~~v~~L~s~~~~~itG~~i~vdGG~~~  289 (291)
T 3ijr_A          261 LAPAYVYLASSDSSYVTGQMIHVNGGVIV  289 (291)
T ss_dssp             THHHHHHHHSGGGTTCCSCEEEESSSCCC
T ss_pred             HHHHHHHHhCCccCCCcCCEEEECCCccc
Confidence                  66777789999999999999764

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=100.00  E-value=3.2e-34  Score=234.02  Aligned_cols=212  Identities=15%  Similarity=0.141  Sum_probs=157.5

Q ss_pred             CCCCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC----
Q 025755            1 MSGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA----   76 (248)
Q Consensus         1 m~~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~----   76 (248)
                      |..+++|++|||||+||||++++++|+++|++|++++|+.... ....+.+   ..++.++.+|++|.++++++++    
T Consensus         3 m~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~-~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~   78 (259)
T 4e6p_A            3 MKRLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERA-RQAAAEI---GPAAYAVQMDVTRQDSIDAAIAATVE   78 (259)
T ss_dssp             -CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHHh---CCCceEEEeeCCCHHHHHHHHHHHHH
Confidence            4457899999999999999999999999999999999986422 2222222   3568899999999999988876    


Q ss_pred             ---CCCEEEEccccCCCCC----CCCccccchhhhHHHHHHHHHHHHhc----C-CCEEEEEeccceeccCCCCCCCCcc
Q 025755           77 ---GCTGVFHVACPVPVGK----VPNPEVQLIDPAVVGTKNVLNSCVKA----K-VKRVVVVSSIGAVMLNPNWPKGQVM  144 (248)
Q Consensus        77 ---~id~vi~~ag~~~~~~----~~~~~~~~~~~n~~g~~~~~~~~~~~----~-~~~iV~vSS~~~~~~~~~~~~~~~~  144 (248)
                         ++|+||||||......    ..+.|...+++|+.++.++++++.+.    + .++||++||..++.+.+..      
T Consensus        79 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~------  152 (259)
T 4e6p_A           79 HAGGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRGEALV------  152 (259)
T ss_dssp             HSSSCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTB------
T ss_pred             HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccCCCCC------
Confidence               7999999999865432    23445678899999999999888654    2 5799999998877665432      


Q ss_pred             CCCCCCchhhhccccchHHHHHHHHHHHHHHHHHhC---CccEEEEccCeeecCCCCCC-----------CCc-cHHHHH
Q 025755          145 DEECWSDEEFCKATENYYCLAKTIAEIQALEYAKRG---ELDIVTVCPSIVIGPMLQPT-----------INT-SSLLLL  209 (248)
Q Consensus       145 ~e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~---~i~v~~vrpg~i~g~~~~~~-----------~~~-~~~~~~  209 (248)
                                     ..|+.||+..+.+.+.++.++   +++||+|+||.++||+....           ... ......
T Consensus       153 ---------------~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (259)
T 4e6p_A          153 ---------------AIYCATKAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHWDGVDALFARYENRPRGEKKRLVGE  217 (259)
T ss_dssp             ---------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTHHHHHHHHHHHHTCCTTHHHHHHHH
T ss_pred             ---------------hHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEECCCccchhhhhhhhhhhhccCChHHHHHHHhc
Confidence                           349999986666666655432   69999999999999874321           000 000111


Q ss_pred             HHHcCC------------CCCCCCCchhhhhhhhhcccee
Q 025755          210 GFLKGF------------FFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       210 ~~~~~~------------~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                      ....++            ++.++.+.|+||+++.||||..
T Consensus       218 ~~p~~r~~~~~dva~~v~~L~s~~~~~itG~~i~vdgG~~  257 (259)
T 4e6p_A          218 AVPFGRMGTAEDLTGMAIFLASAESDYIVSQTYNVDGGNW  257 (259)
T ss_dssp             HSTTSSCBCTHHHHHHHHHTTSGGGTTCCSCEEEESTTSS
T ss_pred             cCCCCCCcCHHHHHHHHHHHhCCccCCCCCCEEEECcChh
Confidence            111111            7888888999999999999975

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=100.00  E-value=1.7e-34  Score=235.25  Aligned_cols=211  Identities=14%  Similarity=0.042  Sum_probs=158.5

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC------
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA------   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~------   76 (248)
                      ++++|+++||||+||||++++++|+++|++|++++|+.+. .....+.+.....++.++.+|++|.++++++++      
T Consensus         9 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   87 (256)
T 3gaf_A            9 HLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEG-AEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQF   87 (256)
T ss_dssp             CCTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHH-HHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            4789999999999999999999999999999999998642 233333444445789999999999999888876      


Q ss_pred             -CCCEEEEccccCCCCC---CCCccccchhhhHHHHHHHHHHHHh----cCCCEEEEEeccceeccCCCCCCCCccCCCC
Q 025755           77 -GCTGVFHVACPVPVGK---VPNPEVQLIDPAVVGTKNVLNSCVK----AKVKRVVVVSSIGAVMLNPNWPKGQVMDEEC  148 (248)
Q Consensus        77 -~id~vi~~ag~~~~~~---~~~~~~~~~~~n~~g~~~~~~~~~~----~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~  148 (248)
                       ++|+||||||......   ..+.|+..+++|+.++.++++++.+    .+.++||++||..++.+.+..          
T Consensus        88 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~----------  157 (256)
T 3gaf_A           88 GKITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGENTNVRM----------  157 (256)
T ss_dssp             SCCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTCCCTTC----------
T ss_pred             CCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHcCCCCCc----------
Confidence             7899999999865432   2244567899999999999888754    466899999998876655432          


Q ss_pred             CCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCCCccHHHHHHHHcCC----------
Q 025755          149 WSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKGF----------  215 (248)
Q Consensus       149 ~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~~~----------  215 (248)
                                 ..|+.||+..+.+.+.++.+   .+++||+|+||.+.+|+....  ..+.....+....          
T Consensus       158 -----------~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~--~~~~~~~~~~~~~p~~r~~~~~d  224 (256)
T 3gaf_A          158 -----------ASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALATV--LTPEIERAMLKHTPLGRLGEAQD  224 (256)
T ss_dssp             -----------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHH--CCHHHHHHHHTTCTTSSCBCHHH
T ss_pred             -----------hHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEEccccCchhhhc--cCHHHHHHHHhcCCCCCCCCHHH
Confidence                       33999997655555555443   259999999999999864321  0111122221111          


Q ss_pred             ------CCCCCCCchhhhhhhhhcccee
Q 025755          216 ------FFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       216 ------~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                            ++.++.+.|+||+++.||||..
T Consensus       225 va~~~~~L~s~~~~~itG~~i~vdgG~~  252 (256)
T 3gaf_A          225 IANAALFLCSPAAAWISGQVLTVSGGGV  252 (256)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESTTSC
T ss_pred             HHHHHHHHcCCcccCccCCEEEECCCcc
Confidence                  6777788999999999999975

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=100.00  E-value=7.2e-34  Score=235.03  Aligned_cols=227  Identities=16%  Similarity=0.102  Sum_probs=162.0

Q ss_pred             CCCCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCc-----------hhhHHhhhhcCCCCCeEEEEccCCCHH
Q 025755            1 MSGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCD-----------EKNAHLKKLEGASENLQLFKTDLLDYE   69 (248)
Q Consensus         1 m~~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~-----------~~~~~~~~~~~~~~~~~~~~~Di~d~~   69 (248)
                      |+++++|++|||||+||||+++++.|+++|++|++++|+...           ........+.....++.++.+|++|.+
T Consensus         5 m~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   84 (287)
T 3pxx_A            5 MGRVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRA   84 (287)
T ss_dssp             CCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHH
T ss_pred             ccccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHH
Confidence            567899999999999999999999999999999999987321           111222223334568999999999999


Q ss_pred             HHHHHhC-------CCCEEEEccccCCCC--CCCCccccchhhhHHHHHHHHHHHHhc--CCCEEEEEeccceeccCCCC
Q 025755           70 ALCAATA-------GCTGVFHVACPVPVG--KVPNPEVQLIDPAVVGTKNVLNSCVKA--KVKRVVVVSSIGAVMLNPNW  138 (248)
Q Consensus        70 ~~~~~~~-------~id~vi~~ag~~~~~--~~~~~~~~~~~~n~~g~~~~~~~~~~~--~~~~iV~vSS~~~~~~~~~~  138 (248)
                      +++++++       ++|+||||||.....  ...+.|...+++|+.++.++++++.+.  +.++||++||..++.+... 
T Consensus        85 ~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~-  163 (287)
T 3pxx_A           85 AVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVAGLIAAAQ-  163 (287)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCHHHHHHHHC-
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccchhcccccc-
Confidence            9988876       789999999986544  223456789999999999999999886  4579999999877665421 


Q ss_pred             CCCCccCCCCCCchhhhccccchHHHHHHHHHHHHHHHHHhC---CccEEEEccCeeecCCCCCCC-----------Ccc
Q 025755          139 PKGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKRG---ELDIVTVCPSIVIGPMLQPTI-----------NTS  204 (248)
Q Consensus       139 ~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~---~i~v~~vrpg~i~g~~~~~~~-----------~~~  204 (248)
                         .+..+..+.      .....|+.||++.+.+.+.++.++   ||+||+|+||++.+++.....           ...
T Consensus       164 ---~~~~~~~~~------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~  234 (287)
T 3pxx_A          164 ---PPGAGGPQG------PGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFRPDLEAPSR  234 (287)
T ss_dssp             ---CC-----CH------HHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCH
T ss_pred             ---cccccccCC------CccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccccchhhhhccccccchh
Confidence               111222211      123459999986666655555442   699999999999999865310           000


Q ss_pred             HHHHHHH-Hc----CC------------CCCCCCCchhhhhhhhhcccee
Q 025755          205 SLLLLGF-LK----GF------------FFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       205 ~~~~~~~-~~----~~------------~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                      ....... ..    ++            |+.++.+.|+||+++.||||+.
T Consensus       235 ~~~~~~~~~~~~~~~~~~~p~dva~~v~fL~s~~a~~itG~~i~vdGG~~  284 (287)
T 3pxx_A          235 ADALLAFPAMQAMPTPYVEASDISNAVCFLASDESRYVTGLQFKVDAGAM  284 (287)
T ss_dssp             HHHHHHGGGGCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHhhhhhhcccCCCCCCHHHHHhhHheecchhhcCCCCceEeECchhh
Confidence            0001000 00    11            7888888999999999999975

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=100.00  E-value=2.6e-34  Score=234.49  Aligned_cols=224  Identities=17%  Similarity=0.134  Sum_probs=156.9

Q ss_pred             CCCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-----
Q 025755            2 SGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-----   76 (248)
Q Consensus         2 ~~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-----   76 (248)
                      +++++|+++||||+||||++++++|+++|++|++++++..+......+.+.....++.++.+|++|.++++++++     
T Consensus         4 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   83 (259)
T 3edm_A            4 QRFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADK   83 (259)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            457899999999999999999999999999999996655444444455555556789999999999999988876     


Q ss_pred             --CCCEEEEccccCCC-CCC----CCccccchhhhHHHHHHHHHHHHhc--CCCEEEEEecccee-ccCCCCCCCCccCC
Q 025755           77 --GCTGVFHVACPVPV-GKV----PNPEVQLIDPAVVGTKNVLNSCVKA--KVKRVVVVSSIGAV-MLNPNWPKGQVMDE  146 (248)
Q Consensus        77 --~id~vi~~ag~~~~-~~~----~~~~~~~~~~n~~g~~~~~~~~~~~--~~~~iV~vSS~~~~-~~~~~~~~~~~~~e  146 (248)
                        ++|+||||||.... ...    .+.|...+++|+.|+.++++++.+.  +.++||++||..+. .+.+.         
T Consensus        84 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~---------  154 (259)
T 3edm_A           84 FGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQAGRDGGGPG---------  154 (259)
T ss_dssp             HCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHCCSTT---------
T ss_pred             hCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcCHHhccCCCCC---------
Confidence              68999999997622 211    2345678999999999999999876  24699999998765 33332         


Q ss_pred             CCCCchhhhccccchHHHHHHHHHHHHHHHHHhC--CccEEEEccCeeecCCCCCCC--CccHHHHHHHHcCC-------
Q 025755          147 ECWSDEEFCKATENYYCLAKTIAEIQALEYAKRG--ELDIVTVCPSIVIGPMLQPTI--NTSSLLLLGFLKGF-------  215 (248)
Q Consensus       147 ~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~--~i~v~~vrpg~i~g~~~~~~~--~~~~~~~~~~~~~~-------  215 (248)
                                  ...|+.||++.+.+.+.++.+.  +++||+|+||.+.+++.....  .....+......++       
T Consensus       155 ------------~~~Y~asKaa~~~l~~~la~e~~~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~r~~~pedv  222 (259)
T 3edm_A          155 ------------ALAYATSKGAVMTFTRGLAKEVGPKIRVNAVCPGMISTTFHDTFTKPEVRERVAGATSLKREGSSEDV  222 (259)
T ss_dssp             ------------CHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCC----------------------CCBCHHHH
T ss_pred             ------------cHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCcCcccccccChHHHHHHHhcCCCCCCcCHHHH
Confidence                        2349999986666666655442  399999999999998754321  00001111111111       


Q ss_pred             -----CCCCCCCchhhhhhhhhccceeEEEeeccCC
Q 025755          216 -----FFTTPSHSYMLERTLVLNQGVRLYRCKIQIP  246 (248)
Q Consensus       216 -----~l~~~~~~~~~g~~l~vd~g~~~~~~~~~~p  246 (248)
                           ++.++...|+||+++.||||..........|
T Consensus       223 a~~v~~L~s~~~~~itG~~i~vdGg~~~~~~~~~~~  258 (259)
T 3edm_A          223 AGLVAFLASDDAAYVTGACYDINGGVLFSEGHHHHH  258 (259)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESBCSSBC-------
T ss_pred             HHHHHHHcCccccCccCCEEEECCCcCCCCCCCCCC
Confidence                 7778888999999999999988766554443

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=100.00  E-value=1.9e-34  Score=236.12  Aligned_cols=209  Identities=18%  Similarity=0.261  Sum_probs=149.2

Q ss_pred             CCCCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC----
Q 025755            1 MSGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA----   76 (248)
Q Consensus         1 m~~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~----   76 (248)
                      |+++++|+++||||+||||+++++.|+++|++|++++|+.... ....+.+   ..++.++.+|++|.++++++++    
T Consensus        22 m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~-~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~   97 (266)
T 3grp_A           22 MFKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKL-KEIAADL---GKDVFVFSANLSDRKSIKQLAEVAER   97 (266)
T ss_dssp             TTCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHHH---CSSEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             hhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHHh---CCceEEEEeecCCHHHHHHHHHHHHH
Confidence            4568899999999999999999999999999999999976422 2222222   4578999999999999988876    


Q ss_pred             ---CCCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHH----hcCCCEEEEEeccceeccCCCCCCCCccC
Q 025755           77 ---GCTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCV----KAKVKRVVVVSSIGAVMLNPNWPKGQVMD  145 (248)
Q Consensus        77 ---~id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~----~~~~~~iV~vSS~~~~~~~~~~~~~~~~~  145 (248)
                         ++|+||||||.......    .+.|+.++++|+.++.++.+++.    +.+.++||++||..++.+.+.        
T Consensus        98 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~--------  169 (266)
T 3grp_A           98 EMEGIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVVGNPG--------  169 (266)
T ss_dssp             HHTSCCEEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC-------C--------
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHHcCCCCC--------
Confidence               68999999998654321    24457789999999776666654    456789999999887766543        


Q ss_pred             CCCCCchhhhccccchHHHHHH----HHHHHHHHHHHhCCccEEEEccCeeecCCCCCCCCccHHHHHHHHcCC------
Q 025755          146 EECWSDEEFCKATENYYCLAKT----IAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKGF------  215 (248)
Q Consensus       146 e~~~~~~~~~~~~~~~Y~~sK~----~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~~~------  215 (248)
                                   ...|+.||+    +++.++.+++++ |+|||+|+||.+.+++....   .......+....      
T Consensus       170 -------------~~~Y~asKaa~~~~~~~la~e~~~~-gI~vn~v~PG~v~t~~~~~~---~~~~~~~~~~~~p~~r~~  232 (266)
T 3grp_A          170 -------------QTNYCAAKAGLIGFSKALAQEIASR-NITVNCIAPGFIKSAMTDKL---NEKQKEAIMAMIPMKRMG  232 (266)
T ss_dssp             -------------HHHHHHHHHHHHHHHHHHHHHHGGG-TEEEEEEEECSBCSHHHHTC---CHHHHHHHHTTCTTCSCB
T ss_pred             -------------chhHHHHHHHHHHHHHHHHHHhhhh-CcEEEEEeeCcCCCchhhcc---CHHHHHHHHhcCCCCCCc
Confidence                         234999997    555555555554 59999999999999865432   112222221111      


Q ss_pred             ----------CCCCCCCchhhhhhhhhccceeE
Q 025755          216 ----------FFTTPSHSYMLERTLVLNQGVRL  238 (248)
Q Consensus       216 ----------~l~~~~~~~~~g~~l~vd~g~~~  238 (248)
                                |+.++.+.|+||+++.||||+.+
T Consensus       233 ~~edvA~~v~~L~s~~~~~itG~~i~vdGG~~~  265 (266)
T 3grp_A          233 IGEEIAFATVYLASDEAAYLTGQTLHINGGMAM  265 (266)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTTC--
T ss_pred             CHHHHHHHHHHHhCccccCccCCEEEECCCeee
Confidence                      67788889999999999999875

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=100.00  E-value=3.2e-34  Score=235.69  Aligned_cols=212  Identities=14%  Similarity=0.098  Sum_probs=158.4

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC------
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA------   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~------   76 (248)
                      ++++|+++||||+||||++++++|+++|++|++++|+.  ......+.+.....++.++.+|++|.++++++.+      
T Consensus        28 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~g  105 (273)
T 3uf0_A           28 SLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTD--GVKEVADEIADGGGSAEAVVADLADLEGAANVAEELAATR  105 (273)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESST--HHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHH--HHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHhcC
Confidence            47899999999999999999999999999999999653  2334444455556789999999999998887754      


Q ss_pred             CCCEEEEccccCCCCC----CCCccccchhhhHHHHHHHHHHHHh----cCCCEEEEEeccceeccCCCCCCCCccCCCC
Q 025755           77 GCTGVFHVACPVPVGK----VPNPEVQLIDPAVVGTKNVLNSCVK----AKVKRVVVVSSIGAVMLNPNWPKGQVMDEEC  148 (248)
Q Consensus        77 ~id~vi~~ag~~~~~~----~~~~~~~~~~~n~~g~~~~~~~~~~----~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~  148 (248)
                      ++|+||||||......    ..+.|+..+++|+.|+.++++++.+    .+.++||++||..++.+.+..          
T Consensus       106 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~----------  175 (273)
T 3uf0_A          106 RVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQGGRNV----------  175 (273)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSC----------
T ss_pred             CCcEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchHhcCCCCCC----------
Confidence            6899999999875432    2344577899999999998888743    467899999998877665432          


Q ss_pred             CCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCC---CccHHHHHHHHcCC-------
Q 025755          149 WSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTI---NTSSLLLLGFLKGF-------  215 (248)
Q Consensus       149 ~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~---~~~~~~~~~~~~~~-------  215 (248)
                                 ..|+.||++.+.+.+.++.+   .|++||+|+||.+++|+.....   .....+......++       
T Consensus       176 -----------~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedv  244 (273)
T 3uf0_A          176 -----------AAYAASKHAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAALRADDERAAEITARIPAGRWATPEDM  244 (273)
T ss_dssp             -----------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHHHSTTSSCBCGGGG
T ss_pred             -----------hhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCchhhcccCHHHHHHHHhcCCCCCCCCHHHH
Confidence                       33999997555555555443   3599999999999998754210   01111112222222       


Q ss_pred             -----CCCCCCCchhhhhhhhhcccee
Q 025755          216 -----FFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       216 -----~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                           ++.++.+.|+||+++.||||+.
T Consensus       245 a~~v~~L~s~~a~~itG~~i~vdGG~~  271 (273)
T 3uf0_A          245 VGPAVFLASDAASYVHGQVLAVDGGWL  271 (273)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHHhCchhcCCcCCEEEECcCcc
Confidence                 6777778999999999999975

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=100.00  E-value=1.4e-33  Score=233.35  Aligned_cols=213  Identities=19%  Similarity=0.178  Sum_probs=157.7

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCC---------------chhhHHhhhhcCCCCCeEEEEccCCC
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPC---------------DEKNAHLKKLEGASENLQLFKTDLLD   67 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~---------------~~~~~~~~~~~~~~~~~~~~~~Di~d   67 (248)
                      .+++|+++||||++|||+++++.|+++|++|++++|+..               +......+.+.....++.++.+|++|
T Consensus         8 ~l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~   87 (286)
T 3uve_A            8 RVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRD   87 (286)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTC
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCC
Confidence            478999999999999999999999999999999998731               11122233344456789999999999


Q ss_pred             HHHHHHHhC-------CCCEEEEccccCCCCC-----CCCccccchhhhHHHHHHHHHHHHhc----C-CCEEEEEeccc
Q 025755           68 YEALCAATA-------GCTGVFHVACPVPVGK-----VPNPEVQLIDPAVVGTKNVLNSCVKA----K-VKRVVVVSSIG  130 (248)
Q Consensus        68 ~~~~~~~~~-------~id~vi~~ag~~~~~~-----~~~~~~~~~~~n~~g~~~~~~~~~~~----~-~~~iV~vSS~~  130 (248)
                      .++++++++       ++|+||||||......     ..+.|+..+++|+.++.++++++.+.    + .++||++||..
T Consensus        88 ~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~  167 (286)
T 3uve_A           88 YDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVG  167 (286)
T ss_dssp             HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGG
T ss_pred             HHHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEECchh
Confidence            999988876       6899999999865432     23445778999999999998887653    3 57999999988


Q ss_pred             eeccCCCCCCCCccCCCCCCchhhhccccchHHHHHHHHH----HHHHHHHHhCCccEEEEccCeeecCCCCCC------
Q 025755          131 AVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAKTIAE----IQALEYAKRGELDIVTVCPSIVIGPMLQPT------  200 (248)
Q Consensus       131 ~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e----~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~------  200 (248)
                      ++.+.+..                     ..|+.||++.+    .++.+++++ +|+||+|+||++.+|+....      
T Consensus       168 ~~~~~~~~---------------------~~Y~asKaa~~~~~~~la~e~~~~-gI~vn~v~PG~v~T~~~~~~~~~~~~  225 (286)
T 3uve_A          168 GLKAYPHT---------------------GHYVAAKHGVVGLMRAFGVELGQH-MIRVNSVHPTHVKTPMLHNEGTFKMF  225 (286)
T ss_dssp             GTSCCTTC---------------------HHHHHHHHHHHHHHHHHHHHHGGG-TEEEEEEEESSBSSTTTSSHHHHHHH
T ss_pred             hccCCCCc---------------------cHHHHHHHHHHHHHHHHHHHhccc-CeEEEEEecCcccCCcccccchhhhc
Confidence            77665443                     23999997544    455555544 59999999999999986421      


Q ss_pred             ----CCccHHHHHH---HHc---CC------------CCCCCCCchhhhhhhhhcccee
Q 025755          201 ----INTSSLLLLG---FLK---GF------------FFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       201 ----~~~~~~~~~~---~~~---~~------------~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                          ..........   ...   ++            |+.++.+.|+||++|.||||..
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~p~r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdGG~~  284 (286)
T 3uve_A          226 RPDLENPGPDDMAPICQMFHTLPIPWVEPIDISNAVLFFASDEARYITGVTLPIDAGSC  284 (286)
T ss_dssp             CTTSSSCCHHHHHHHHHTTCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             cccccccchhhHHHHHHhhhccCCCcCCHHHHHHHHHHHcCccccCCcCCEEeECCccc
Confidence                0011111111   100   11            7888888999999999999975

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=100.00  E-value=3e-34  Score=236.59  Aligned_cols=213  Identities=19%  Similarity=0.167  Sum_probs=157.9

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-------
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-------   76 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-------   76 (248)
                      +++|++|||||+||||+++++.|+++|++|++++|+... .....+.+.....++.++.+|++|.++++++++       
T Consensus        22 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~-~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  100 (279)
T 3sju_A           22 SRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKN-VSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFG  100 (279)
T ss_dssp             ---CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHH-HHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            568999999999999999999999999999999998642 333344455556789999999999999888775       


Q ss_pred             CCCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHHh------cCCCEEEEEeccceeccCCCCCCCCccCC
Q 025755           77 GCTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCVK------AKVKRVVVVSSIGAVMLNPNWPKGQVMDE  146 (248)
Q Consensus        77 ~id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~~------~~~~~iV~vSS~~~~~~~~~~~~~~~~~e  146 (248)
                      ++|+||||||.......    .+.|...+++|+.|+.++++++.+      .+.++||++||..+..+.+..        
T Consensus       101 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~~~~~~~--------  172 (279)
T 3sju_A          101 PIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQGVMYA--------  172 (279)
T ss_dssp             SCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGTSCCTTC--------
T ss_pred             CCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhhccCCCCC--------
Confidence            68999999998654321    234567889999999999998766      356899999998877665432        


Q ss_pred             CCCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCC-------CC-ccHHHHHHHHcC-
Q 025755          147 ECWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPT-------IN-TSSLLLLGFLKG-  214 (248)
Q Consensus       147 ~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~-------~~-~~~~~~~~~~~~-  214 (248)
                                   ..|+.||++.+.+.+.++.+   .|++||+|+||.+.+|+....       .. ........+... 
T Consensus       173 -------------~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (279)
T 3sju_A          173 -------------APYTASKHGVVGFTKSVGFELAKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKI  239 (279)
T ss_dssp             -------------HHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEESSBCSHHHHHHHHSCCSSSCCCHHHHHHHHHTTC
T ss_pred             -------------hhHHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCcccchHHHHHHhhhhhcccCChHHHHHHHHhcC
Confidence                         33999998555555555543   359999999999999864210       00 111222222211 


Q ss_pred             ---C------------CCCCCCCchhhhhhhhhccceeE
Q 025755          215 ---F------------FFTTPSHSYMLERTLVLNQGVRL  238 (248)
Q Consensus       215 ---~------------~l~~~~~~~~~g~~l~vd~g~~~  238 (248)
                         +            ++.++.+.|+||+++.||||+.+
T Consensus       240 p~~r~~~pedvA~~v~~L~s~~a~~itG~~i~vdGG~~~  278 (279)
T 3sju_A          240 PLGRYSTPEEVAGLVGYLVTDAAASITAQALNVCGGLGN  278 (279)
T ss_dssp             TTSSCBCHHHHHHHHHHHTSSGGGGCCSCEEEESTTCCC
T ss_pred             CCCCCCCHHHHHHHHHHHhCccccCcCCcEEEECCCccC
Confidence               1            78888889999999999999875

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=100.00  E-value=4.5e-34  Score=235.17  Aligned_cols=215  Identities=16%  Similarity=0.185  Sum_probs=158.6

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC------
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA------   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~------   76 (248)
                      ++++|+++||||+||||+++++.|+++|++|++++|+.+. .....+++.....++.++++|++|.++++++++      
T Consensus        29 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~  107 (276)
T 3r1i_A           29 DLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDA-LQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGEL  107 (276)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGG-GHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            4789999999999999999999999999999999998643 333334444445688999999999999998876      


Q ss_pred             -CCCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHHhc----C-CCEEEEEeccceeccCCCCCCCCccCC
Q 025755           77 -GCTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCVKA----K-VKRVVVVSSIGAVMLNPNWPKGQVMDE  146 (248)
Q Consensus        77 -~id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~~~----~-~~~iV~vSS~~~~~~~~~~~~~~~~~e  146 (248)
                       ++|+||||||.......    .+.|+..+++|+.++.++++++.+.    + .++||++||..+..+...         
T Consensus       108 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~~~---------  178 (276)
T 3r1i_A          108 GGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINIP---------  178 (276)
T ss_dssp             SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCCS---------
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccCCC---------
Confidence             78999999998764422    2345678899999999998887653    3 379999999776543311         


Q ss_pred             CCCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCCCccHHHHHHHHcCC--------
Q 025755          147 ECWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKGF--------  215 (248)
Q Consensus       147 ~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~~~--------  215 (248)
                                .....|+.||++.+.+.+.++.+   .+++||+|+||.+.+++..........+......++        
T Consensus       179 ----------~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~p~~r~~~pedvA  248 (276)
T 3r1i_A          179 ----------QQVSHYCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEPLADYHALWEPKIPLGRMGRPEELT  248 (276)
T ss_dssp             ----------SCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGGGGGGHHHHGGGSTTSSCBCGGGSH
T ss_pred             ----------CCcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccccchHHHHHHHhcCCCCCCcCHHHHH
Confidence                      01234999997655555555443   359999999999999986533211111111111111        


Q ss_pred             ----CCCCCCCchhhhhhhhhcccee
Q 025755          216 ----FFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       216 ----~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                          |+.++.+.|+||+++.||||+.
T Consensus       249 ~~v~fL~s~~~~~itG~~i~vdGG~~  274 (276)
T 3r1i_A          249 GLYLYLASAASSYMTGSDIVIDGGYT  274 (276)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred             HHHHHHcCccccCccCcEEEECcCcc
Confidence                6777888999999999999975

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=100.00  E-value=7.5e-35  Score=239.21  Aligned_cols=213  Identities=13%  Similarity=0.095  Sum_probs=159.2

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC------
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA------   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~------   76 (248)
                      ++++|++|||||+||||+++++.|+++|++|++++|+... .....+++.....++.++.+|++|.++++++++      
T Consensus        23 ~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~-~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  101 (271)
T 4ibo_A           23 DLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSR-VAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQG  101 (271)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHH-HHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHC
Confidence            4789999999999999999999999999999999987642 333344444445689999999999999988876      


Q ss_pred             -CCCEEEEccccCCCCC----CCCccccchhhhHHHHHHHHHHHHh----cCCCEEEEEeccceeccCCCCCCCCccCCC
Q 025755           77 -GCTGVFHVACPVPVGK----VPNPEVQLIDPAVVGTKNVLNSCVK----AKVKRVVVVSSIGAVMLNPNWPKGQVMDEE  147 (248)
Q Consensus        77 -~id~vi~~ag~~~~~~----~~~~~~~~~~~n~~g~~~~~~~~~~----~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~  147 (248)
                       ++|+||||||......    ..+.|+..+++|+.++.++++++.+    .+.++||++||..+..+.+..         
T Consensus       102 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~~~~~~~---------  172 (271)
T 4ibo_A          102 IDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSELARATV---------  172 (271)
T ss_dssp             CCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCTTC---------
T ss_pred             CCCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCCCCCCc---------
Confidence             6899999999865432    2344577899999999998777654    366899999998876665432         


Q ss_pred             CCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCCCccHHHHHH----HHcCC-----
Q 025755          148 CWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTINTSSLLLLG----FLKGF-----  215 (248)
Q Consensus       148 ~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~----~~~~~-----  215 (248)
                                  ..|+.||++.+.+.+.++.+   .|++||+|+||.+.+++..... ..+.+...    ...++     
T Consensus       173 ------------~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~-~~~~~~~~~~~~~p~~r~~~pe  239 (271)
T 4ibo_A          173 ------------APYTVAKGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQALI-DNPEFDAWVKARTPAKRWGKPQ  239 (271)
T ss_dssp             ------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHH-HCHHHHHHHHHHSTTCSCBCGG
T ss_pred             ------------hhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcchhhcc-cCHHHHHHHHhcCCCCCCcCHH
Confidence                        33999997555555554433   3599999999999998754210 00111111    11111     


Q ss_pred             -------CCCCCCCchhhhhhhhhccceeE
Q 025755          216 -------FFTTPSHSYMLERTLVLNQGVRL  238 (248)
Q Consensus       216 -------~l~~~~~~~~~g~~l~vd~g~~~  238 (248)
                             |+.++.+.|+||+++.||||..+
T Consensus       240 dva~~v~~L~s~~~~~itG~~i~vdGG~~~  269 (271)
T 4ibo_A          240 ELVGTAVFLSASASDYVNGQIIYVDGGMLS  269 (271)
T ss_dssp             GGHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHHHHHhCccccCCCCcEEEECCCeec
Confidence                   67777789999999999999764

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=100.00  E-value=3.8e-34  Score=232.02  Aligned_cols=211  Identities=19%  Similarity=0.148  Sum_probs=158.0

Q ss_pred             CCCCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC----
Q 025755            1 MSGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA----   76 (248)
Q Consensus         1 m~~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~----   76 (248)
                      |+++++|+++||||+||||+++++.|+++|++|++++|+.+. .....+.+   ..++.++.+|++|.++++++++    
T Consensus         1 ~~~l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~-~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~   76 (247)
T 3rwb_A            1 TERLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEG-AKAAAASI---GKKARAIAADISDPGSVKALFAEIQA   76 (247)
T ss_dssp             CCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHH-HHHHHHHH---CTTEEECCCCTTCHHHHHHHHHHHHH
T ss_pred             CCCcCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHHh---CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            567999999999999999999999999999999999998642 22222222   4578999999999999988876    


Q ss_pred             ---CCCEEEEccccCCCCC----CCCccccchhhhHHHHHHHHHHHH----hcC-CCEEEEEeccceeccCCCCCCCCcc
Q 025755           77 ---GCTGVFHVACPVPVGK----VPNPEVQLIDPAVVGTKNVLNSCV----KAK-VKRVVVVSSIGAVMLNPNWPKGQVM  144 (248)
Q Consensus        77 ---~id~vi~~ag~~~~~~----~~~~~~~~~~~n~~g~~~~~~~~~----~~~-~~~iV~vSS~~~~~~~~~~~~~~~~  144 (248)
                         ++|+||||||......    ..+.|+..+++|+.++.++++++.    +.+ .++||++||..+..+.+...     
T Consensus        77 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~-----  151 (247)
T 3rwb_A           77 LTGGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGTPNMA-----  151 (247)
T ss_dssp             HHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHTCTTCH-----
T ss_pred             HCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccCCCCch-----
Confidence               6899999999875432    124457789999999999888854    444 68999999988777665433     


Q ss_pred             CCCCCCchhhhccccchHHHHHH----HHHHHHHHHHHhCCccEEEEccCeeecCCCCCCCC-ccHHHHHH-HHcCC---
Q 025755          145 DEECWSDEEFCKATENYYCLAKT----IAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTIN-TSSLLLLG-FLKGF---  215 (248)
Q Consensus       145 ~e~~~~~~~~~~~~~~~Y~~sK~----~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~-~~~~~~~~-~~~~~---  215 (248)
                                      .|+.||+    +++.++.+++++ |++||+|+||.+.+++...... ....+... ...++   
T Consensus       152 ----------------~Y~asKaa~~~~~~~la~e~~~~-gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~r~~~  214 (247)
T 3rwb_A          152 ----------------AYVAAKGGVIGFTRALATELGKY-NITANAVTPGLIESDGVKASPHNEAFGFVEMLQAMKGKGQ  214 (247)
T ss_dssp             ----------------HHHHHHHHHHHHHHHHHHHHGGG-TEEEEEEEECSBCCHHHHTSGGGGGHHHHHHHSSSCSCBC
T ss_pred             ----------------hhHHHHHHHHHHHHHHHHHhhhc-CeEEEEEeeCcCcCccccccChhHHHHHHhcccccCCCcC
Confidence                            3999996    555555555544 5999999999999986433211 11111111 01111   


Q ss_pred             ---------CCCCCCCchhhhhhhhhcccee
Q 025755          216 ---------FFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       216 ---------~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                               |+.++...|+||+++.||||+.
T Consensus       215 pedva~~v~~L~s~~~~~itG~~i~vdGG~~  245 (247)
T 3rwb_A          215 PEHIADVVSFLASDDARWITGQTLNVDAGMV  245 (247)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESTTSS
T ss_pred             HHHHHHHHHHHhCccccCCCCCEEEECCCcc
Confidence                     7788888999999999999974

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=100.00  E-value=7.6e-34  Score=233.13  Aligned_cols=214  Identities=14%  Similarity=0.112  Sum_probs=157.7

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC------
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA------   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~------   76 (248)
                      ++++|++|||||+||||++++++|+++|++|++++++..+......+.+.....++.++.+|++|.++++++++      
T Consensus        15 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   94 (270)
T 3is3_A           15 RLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHF   94 (270)
T ss_dssp             CCTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CcCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            47899999999999999999999999999999988765443344444444446789999999999999988876      


Q ss_pred             -CCCEEEEccccCCCCC----CCCccccchhhhHHHHHHHHHHHHhc--CCCEEEEEeccc-eeccCCCCCCCCccCCCC
Q 025755           77 -GCTGVFHVACPVPVGK----VPNPEVQLIDPAVVGTKNVLNSCVKA--KVKRVVVVSSIG-AVMLNPNWPKGQVMDEEC  148 (248)
Q Consensus        77 -~id~vi~~ag~~~~~~----~~~~~~~~~~~n~~g~~~~~~~~~~~--~~~~iV~vSS~~-~~~~~~~~~~~~~~~e~~  148 (248)
                       ++|+||||||......    ..+.|+..+++|+.|+.++++++.+.  ..++||++||.. ...+.+.           
T Consensus        95 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-----------  163 (270)
T 3is3_A           95 GHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNTSKDFSVPK-----------  163 (270)
T ss_dssp             SCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTTTTTCCCTT-----------
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCchhccCCCCC-----------
Confidence             6899999999875432    23456778999999999999999876  346999999966 2233322           


Q ss_pred             CCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCC---------CCccHHHHHH----HH
Q 025755          149 WSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPT---------INTSSLLLLG----FL  212 (248)
Q Consensus       149 ~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~---------~~~~~~~~~~----~~  212 (248)
                                ...|+.||++.+.+.+.++.+   .|++||+|+||.+.+|+....         ..........    ..
T Consensus       164 ----------~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p  233 (270)
T 3is3_A          164 ----------HSLYSGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASP  233 (270)
T ss_dssp             ----------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTTHHHHGGGGSTTGGGSCHHHHHHHHHHHST
T ss_pred             ----------CchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhhhhccccccccchHHHHHHHHhcCC
Confidence                      234999997555555554443   359999999999999975310         0001111111    11


Q ss_pred             cCC------------CCCCCCCchhhhhhhhhcccee
Q 025755          213 KGF------------FFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       213 ~~~------------~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                      .++            |+.++.+.|+||+++.||||+.
T Consensus       234 ~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~  270 (270)
T 3is3_A          234 LHRNGWPQDVANVVGFLVSKEGEWVNGKVLTLDGGAA  270 (270)
T ss_dssp             TCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTCC
T ss_pred             CCCCCCHHHHHHHHHHHcCCccCCccCcEEEeCCCCC
Confidence            111            7888888999999999999963

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=100.00  E-value=3.1e-34  Score=235.30  Aligned_cols=211  Identities=17%  Similarity=0.171  Sum_probs=158.0

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC------
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA------   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~------   76 (248)
                      ++++|+++||||+||||+++++.|+++|++|++++|+..+......+.+.....++.++.+|++|.++++++++      
T Consensus        25 ~l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~  104 (269)
T 4dmm_A           25 PLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIERW  104 (269)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            36789999999999999999999999999999999865433334444444445689999999999999988876      


Q ss_pred             -CCCEEEEccccCCCCC----CCCccccchhhhHHHHHHHHHHHHh----cCCCEEEEEeccceeccCCCCCCCCccCCC
Q 025755           77 -GCTGVFHVACPVPVGK----VPNPEVQLIDPAVVGTKNVLNSCVK----AKVKRVVVVSSIGAVMLNPNWPKGQVMDEE  147 (248)
Q Consensus        77 -~id~vi~~ag~~~~~~----~~~~~~~~~~~n~~g~~~~~~~~~~----~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~  147 (248)
                       ++|+||||||......    ..+.|+.++++|+.|+.++++++.+    .+.++||++||..+..+.+..         
T Consensus       105 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~---------  175 (269)
T 4dmm_A          105 GRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMGNPGQ---------  175 (269)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHHHCCTTC---------
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCCCc---------
Confidence             6899999999875432    2345577899999999998888754    466899999998877766543         


Q ss_pred             CCCchhhhccccchHHHHHH----HHHHHHHHHHHhCCccEEEEccCeeecCCCCCCCC------------ccHHHHHHH
Q 025755          148 CWSDEEFCKATENYYCLAKT----IAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTIN------------TSSLLLLGF  211 (248)
Q Consensus       148 ~~~~~~~~~~~~~~Y~~sK~----~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~------------~~~~~~~~~  211 (248)
                                  ..|+.||+    +++.++.+++++ |++||+|+||.+.+|+......            ..+.-+...
T Consensus       176 ------------~~Y~asK~a~~~l~~~la~e~~~~-gi~vn~v~PG~v~T~~~~~~~~~~~~~~~p~~r~~~~~dvA~~  242 (269)
T 4dmm_A          176 ------------ANYSAAKAGVIGLTKTVAKELASR-GITVNAVAPGFIATDMTSELAAEKLLEVIPLGRYGEAAEVAGV  242 (269)
T ss_dssp             ------------HHHHHHHHHHHHHHHHHHHHHGGG-TCEEEEEEECCBTTSCSCHHHHHHHGGGCTTSSCBCHHHHHHH
T ss_pred             ------------hhHHHHHHHHHHHHHHHHHHHhhh-CcEEEEEEECCCcCcccccccHHHHHhcCCCCCCCCHHHHHHH
Confidence                        33999998    455555555544 5999999999999998642100            001111111


Q ss_pred             HcCCCCCCC-CCchhhhhhhhhcccee
Q 025755          212 LKGFFFTTP-SHSYMLERTLVLNQGVR  237 (248)
Q Consensus       212 ~~~~~l~~~-~~~~~~g~~l~vd~g~~  237 (248)
                      ..  ++.++ ...|+||+++.||||+.
T Consensus       243 v~--~l~s~~~~~~itG~~i~vdGG~~  267 (269)
T 4dmm_A          243 VR--FLAADPAAAYITGQVINIDGGLV  267 (269)
T ss_dssp             HH--HHHHCGGGGGCCSCEEEESTTSC
T ss_pred             HH--HHhCCcccCCCcCCEEEECCCee
Confidence            11  56665 67899999999999975

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=100.00  E-value=1.1e-33  Score=230.80  Aligned_cols=215  Identities=14%  Similarity=0.071  Sum_probs=160.6

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEE-EcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC------
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGT-VRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA------   76 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~------   76 (248)
                      +++|++|||||+||||+++++.|+++|++|++. +|+.. ......+.+.....++.++.+|++|.++++++++      
T Consensus         2 ~~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (258)
T 3oid_A            2 EQNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKK-AALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETF   80 (258)
T ss_dssp             -CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHH-HHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHH-HHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            468999999999999999999999999999997 66543 3334444444556789999999999999888875      


Q ss_pred             -CCCEEEEccccCCCCC----CCCccccchhhhHHHHHHHHHHHHh----cCCCEEEEEeccceeccCCCCCCCCccCCC
Q 025755           77 -GCTGVFHVACPVPVGK----VPNPEVQLIDPAVVGTKNVLNSCVK----AKVKRVVVVSSIGAVMLNPNWPKGQVMDEE  147 (248)
Q Consensus        77 -~id~vi~~ag~~~~~~----~~~~~~~~~~~n~~g~~~~~~~~~~----~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~  147 (248)
                       ++|+||||||......    ..+.|+..+++|+.++.++++++.+    .+.++||++||..++.+.+..         
T Consensus        81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~---------  151 (258)
T 3oid_A           81 GRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIRYLENY---------  151 (258)
T ss_dssp             SCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGGTSBCTTC---------
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhCCCCCCc---------
Confidence             5799999999754432    1234567899999999999888754    466899999998876655432         


Q ss_pred             CCCchhhhccccchHHHHHHHHHHHHHHHHHhC---CccEEEEccCeeecCCCCCCCCccHHHHHH----HHcCC-----
Q 025755          148 CWSDEEFCKATENYYCLAKTIAEIQALEYAKRG---ELDIVTVCPSIVIGPMLQPTINTSSLLLLG----FLKGF-----  215 (248)
Q Consensus       148 ~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~---~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~----~~~~~-----  215 (248)
                                  ..|+.||++.+.+.+.++.++   +++||+|+||.+.+++...... .......    ...++     
T Consensus       152 ------------~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~p~~r~~~~~  218 (258)
T 3oid_A          152 ------------TTVGVSKAALEALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFPN-REDLLEDARQNTPAGRMVEIK  218 (258)
T ss_dssp             ------------HHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGCTT-HHHHHHHHHHHCTTSSCBCHH
T ss_pred             ------------HHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhccc-CHHHHHHHHhcCCCCCCcCHH
Confidence                        339999987776666666543   6999999999999997653211 1111111    11121     


Q ss_pred             -------CCCCCCCchhhhhhhhhccceeEEEe
Q 025755          216 -------FFTTPSHSYMLERTLVLNQGVRLYRC  241 (248)
Q Consensus       216 -------~l~~~~~~~~~g~~l~vd~g~~~~~~  241 (248)
                             ++.++.+.|+||+++.||||+.....
T Consensus       219 dva~~v~~L~s~~~~~itG~~i~vdGG~~~~~~  251 (258)
T 3oid_A          219 DMVDTVEFLVSSKADMIRGQTIIVDGGRSLLVL  251 (258)
T ss_dssp             HHHHHHHHHTSSTTTTCCSCEEEESTTGGGBCC
T ss_pred             HHHHHHHHHhCcccCCccCCEEEECCCccCCCC
Confidence                   78888889999999999999876543

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=100.00  E-value=5.4e-33  Score=232.23  Aligned_cols=215  Identities=15%  Similarity=0.173  Sum_probs=175.0

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEEcc
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFHVA   85 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~~a   85 (248)
                      +|+|+||||+|+||+++++.|+++|++|++++|+... . . +       .++.++.+|++ .+++.++++++|+|||+|
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~-~-~-------~~~~~~~~Dl~-~~~~~~~~~~~d~Vih~a   70 (311)
T 3m2p_A            2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGN-K-A-I-------NDYEYRVSDYT-LEDLINQLNDVDAVVHLA   70 (311)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC---------------CCEEEECCCC-HHHHHHHTTTCSEEEECC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCc-c-c-C-------CceEEEEcccc-HHHHHHhhcCCCEEEEcc
Confidence            4799999999999999999999999999999998421 1 1 1       16889999999 999999999999999999


Q ss_pred             ccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccccchHHHH
Q 025755           86 CPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLA  165 (248)
Q Consensus        86 g~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~s  165 (248)
                      +.....    .+...+++|+.++.++++++++.+.++|||+||.. +|+...   ..+++|+++..+      .+.|+.+
T Consensus        71 ~~~~~~----~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS~~-vyg~~~---~~~~~E~~~~~p------~~~Y~~s  136 (311)
T 3m2p_A           71 ATRGSQ----GKISEFHDNEILTQNLYDACYENNISNIVYASTIS-AYSDET---SLPWNEKELPLP------DLMYGVS  136 (311)
T ss_dssp             CCCCSS----SCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEEGG-GCCCGG---GCSBCTTSCCCC------SSHHHHH
T ss_pred             ccCCCC----ChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHH-HhCCCC---CCCCCCCCCCCC------CchhHHH
Confidence            986653    55788999999999999999999999999999965 555432   466788776554      4569999


Q ss_pred             HHHHHHHHHHHHHhCCccEEEEccCeeecCCCCCCCCccHHHHHHHHcCCCCCCCCCchhhhhhhhhccceeEEEeeccC
Q 025755          166 KTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKGFFFTTPSHSYMLERTLVLNQGVRLYRCKIQI  245 (248)
Q Consensus       166 K~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~l~vd~g~~~~~~~~~~  245 (248)
                      |..+|.++..++.+.+++++++||+.+|||...+. .....++..+..+..+....++....+.+++|+...++..+++.
T Consensus       137 K~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~v~Dva~a~~~~~~~  215 (311)
T 3m2p_A          137 KLACEHIGNIYSRKKGLCIKNLRFAHLYGFNEKNN-YMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAKSVIYALKQ  215 (311)
T ss_dssp             HHHHHHHHHHHHHHSCCEEEEEEECEEECSCC--C-CHHHHHHHHHHTCCCEEESSBCCCCEEEEEHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHcCCCEEEEeeCceeCcCCCCC-CHHHHHHHHHHcCCCeEEecCCCeEEceEEHHHHHHHHHHHHhc
Confidence            99999999999998889999999999999987643 45677788888887766655555556778888887776666654


Q ss_pred             C
Q 025755          246 P  246 (248)
Q Consensus       246 p  246 (248)
                      |
T Consensus       216 ~  216 (311)
T 3m2p_A          216 E  216 (311)
T ss_dssp             T
T ss_pred             C
Confidence            4

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=100.00  E-value=8.7e-34  Score=232.38  Aligned_cols=210  Identities=20%  Similarity=0.224  Sum_probs=154.4

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-------
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-------   76 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-------   76 (248)
                      +++|+++||||+||||+++++.|+++|++|++.+++..+......+.+.....++.++.+|++|.++++++++       
T Consensus        25 ~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  104 (267)
T 3u5t_A           25 ETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAFG  104 (267)
T ss_dssp             --CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            5789999999999999999999999999999987665444444444444445789999999999999988876       


Q ss_pred             CCCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHHhc--CCCEEEEEeccceeccCCCCCCCCccCCCCCC
Q 025755           77 GCTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCVKA--KVKRVVVVSSIGAVMLNPNWPKGQVMDEECWS  150 (248)
Q Consensus        77 ~id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~~~--~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~  150 (248)
                      ++|+||||||.......    .+.|+..+++|+.|+.++++++.+.  ..++||++||..+..+.+..            
T Consensus       105 ~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~------------  172 (267)
T 3u5t_A          105 GVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTSQVGLLHPSY------------  172 (267)
T ss_dssp             CEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCTHHHHCCTTC------------
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeChhhccCCCCc------------
Confidence            68999999998754322    2345678899999999999998775  34799999998776665432            


Q ss_pred             chhhhccccchHHHHHHHHHHHHHHHHHhC---CccEEEEccCeeecCCCCCCC-Ccc---------------HHHHHHH
Q 025755          151 DEEFCKATENYYCLAKTIAEIQALEYAKRG---ELDIVTVCPSIVIGPMLQPTI-NTS---------------SLLLLGF  211 (248)
Q Consensus       151 ~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~---~i~v~~vrpg~i~g~~~~~~~-~~~---------------~~~~~~~  211 (248)
                               ..|+.||++.+.+.+.++.+.   |++||+|+||.+.+++..... ...               +.-+...
T Consensus       173 ---------~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~  243 (267)
T 3u5t_A          173 ---------GIYAAAKAGVEAMTHVLSKELRGRDITVNAVAPGPTATDLFLEGKSDEVRDRFAKLAPLERLGTPQDIAGA  243 (267)
T ss_dssp             ---------HHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECCBC-----------CHHHHHTSSTTCSCBCHHHHHHH
T ss_pred             ---------hHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEEECCCcCccccccCCHHHHHHHHhcCCCCCCcCHHHHHHH
Confidence                     239999987777777776653   699999999999999753210 111               1111111


Q ss_pred             HcCCCCCCCCCchhhhhhhhhccce
Q 025755          212 LKGFFFTTPSHSYMLERTLVLNQGV  236 (248)
Q Consensus       212 ~~~~~l~~~~~~~~~g~~l~vd~g~  236 (248)
                      ..  |+.++.+.|+||+++.||||.
T Consensus       244 v~--~L~s~~~~~itG~~i~vdGG~  266 (267)
T 3u5t_A          244 VA--FLAGPDGAWVNGQVLRANGGI  266 (267)
T ss_dssp             HH--HHHSTTTTTCCSEEEEESSSC
T ss_pred             HH--HHhCccccCccCCEEEeCCCc
Confidence            11  778888999999999999996

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=100.00  E-value=2.1e-33  Score=233.78  Aligned_cols=213  Identities=21%  Similarity=0.192  Sum_probs=157.2

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCC-----------chhhHHhhhhcCCCCCeEEEEccCCCHHHH
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPC-----------DEKNAHLKKLEGASENLQLFKTDLLDYEAL   71 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~-----------~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~   71 (248)
                      ++++|+++||||++|||+++++.|+++|++|++++|+..           +......+.+.....++.++.+|++|.+++
T Consensus        25 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v  104 (299)
T 3t7c_A           25 KVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAM  104 (299)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHH
T ss_pred             ccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHH
Confidence            478999999999999999999999999999999998732           112222333344457899999999999998


Q ss_pred             HHHhC-------CCCEEEEccccCCCCC-----CCCccccchhhhHHHHHHHHHHHHhc-----CCCEEEEEeccceecc
Q 025755           72 CAATA-------GCTGVFHVACPVPVGK-----VPNPEVQLIDPAVVGTKNVLNSCVKA-----KVKRVVVVSSIGAVML  134 (248)
Q Consensus        72 ~~~~~-------~id~vi~~ag~~~~~~-----~~~~~~~~~~~n~~g~~~~~~~~~~~-----~~~~iV~vSS~~~~~~  134 (248)
                      +++++       ++|+||||||......     ..+.|+..+++|+.|+.++++++.+.     +.++||++||..++.+
T Consensus       105 ~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~~~~~  184 (299)
T 3t7c_A          105 QAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRG  184 (299)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGGGTSC
T ss_pred             HHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccC
Confidence            88876       6899999999765432     12445778999999999999887653     3689999999887766


Q ss_pred             CCCCCCCCccCCCCCCchhhhccccchHHHHHHHHHH----HHHHHHHhCCccEEEEccCeeecCCCCCC----------
Q 025755          135 NPNWPKGQVMDEECWSDEEFCKATENYYCLAKTIAEI----QALEYAKRGELDIVTVCPSIVIGPMLQPT----------  200 (248)
Q Consensus       135 ~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~----l~~~~~~~~~i~v~~vrpg~i~g~~~~~~----------  200 (248)
                      .+..                     ..|+.||++.+.    ++.+++++ ||+||+|+||.+.+|+....          
T Consensus       185 ~~~~---------------------~~Y~asKaa~~~l~~~la~e~~~~-gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~  242 (299)
T 3t7c_A          185 AENI---------------------GNYIASKHGLHGLMRTMALELGPR-NIRVNIVCPSSVATPMLLNEPTYRMFRPDL  242 (299)
T ss_dssp             CTTC---------------------HHHHHHHHHHHHHHHHHHHHHGGG-TEEEEEEEESCBSSTTTSSHHHHHHHCTTS
T ss_pred             CCCc---------------------chHHHHHHHHHHHHHHHHHHhccc-CcEEEEEecCCccCccccccchhhhhhhhh
Confidence            5432                     339999975554    45555544 59999999999999986421          


Q ss_pred             -CCccHHHH--HHHHc---CC------------CCCCCCCchhhhhhhhhcccee
Q 025755          201 -INTSSLLL--LGFLK---GF------------FFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       201 -~~~~~~~~--~~~~~---~~------------~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                       ......+.  .....   ++            |+.++.+.|+||+++.||||..
T Consensus       243 ~~~~~~~~~~~~~~~~~~p~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG~~  297 (299)
T 3t7c_A          243 ENPTVEDFQVASRQMHVLPIPYVEPADISNAILFLVSDDARYITGVSLPVDGGAL  297 (299)
T ss_dssp             SSCCHHHHHHHHHHHSSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             ccchhhHHHHHhhhhcccCcCCCCHHHHHHHHHHHhCcccccCcCCEEeeCCCcc
Confidence             00000000  00000   11            7788888999999999999975

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=100.00  E-value=8.9e-34  Score=231.08  Aligned_cols=208  Identities=18%  Similarity=0.202  Sum_probs=146.8

Q ss_pred             CCCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-----
Q 025755            2 SGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-----   76 (248)
Q Consensus         2 ~~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-----   76 (248)
                      +++++|+++||||+||||+++++.|+++|++|++++|+..... ...+.+   ..++.++.+|++|.++++++++     
T Consensus         3 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~-~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~   78 (257)
T 3tpc_A            3 MQLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGE-EPAAEL---GAAVRFRNADVTNEADATAALAFAKQE   78 (257)
T ss_dssp             -CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC----------------CEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHH-HHHHHh---CCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            4588999999999999999999999999999999999875322 222222   3578899999999999988876     


Q ss_pred             --CCCEEEEccccCCCCCC--------CCccccchhhhHHHHHHHHHHHHhc----------CCCEEEEEeccceeccCC
Q 025755           77 --GCTGVFHVACPVPVGKV--------PNPEVQLIDPAVVGTKNVLNSCVKA----------KVKRVVVVSSIGAVMLNP  136 (248)
Q Consensus        77 --~id~vi~~ag~~~~~~~--------~~~~~~~~~~n~~g~~~~~~~~~~~----------~~~~iV~vSS~~~~~~~~  136 (248)
                        ++|+||||||.......        .+.|...+++|+.++.++++++.+.          +.++||++||..++.+.+
T Consensus        79 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~~~~  158 (257)
T 3tpc_A           79 FGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQI  158 (257)
T ss_dssp             HSCCCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCT
T ss_pred             cCCCCEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhccCCC
Confidence              79999999998754321        2445678999999999999988764          457899999988877665


Q ss_pred             CCCCCCccCCCCCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCCCcc---------
Q 025755          137 NWPKGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTINTS---------  204 (248)
Q Consensus       137 ~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~~~~---------  204 (248)
                      ..                     ..|+.||++.+.+.+.++.+   .|+++|+|+||.+.+|+........         
T Consensus       159 ~~---------------------~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p  217 (257)
T 3tpc_A          159 GQ---------------------AAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMAGMPQDVQDALAASVP  217 (257)
T ss_dssp             TC---------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC--------------CCSS
T ss_pred             CC---------------------cchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhccCCHHHHHHHHhcCC
Confidence            42                     33999997555555444433   3599999999999998754321100         


Q ss_pred             -------HHHHHHHHcCCCCCCCCCchhhhhhhhhccceeE
Q 025755          205 -------SLLLLGFLKGFFFTTPSHSYMLERTLVLNQGVRL  238 (248)
Q Consensus       205 -------~~~~~~~~~~~~l~~~~~~~~~g~~l~vd~g~~~  238 (248)
                             +.-+.....  ++..  +.|++|+++.||||..+
T Consensus       218 ~~~r~~~~~dva~~v~--~l~s--~~~itG~~i~vdGG~~~  254 (257)
T 3tpc_A          218 FPPRLGRAEEYAALVK--HICE--NTMLNGEVIRLDGALRM  254 (257)
T ss_dssp             SSCSCBCHHHHHHHHH--HHHH--CTTCCSCEEEESTTCCC
T ss_pred             CCCCCCCHHHHHHHHH--HHcc--cCCcCCcEEEECCCccC
Confidence                   111111110  3333  37999999999999864

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=100.00  E-value=2.3e-34  Score=235.68  Aligned_cols=214  Identities=18%  Similarity=0.185  Sum_probs=157.2

Q ss_pred             CCCCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcC-CCCCeEEEEccCCCHHHHHHHhC---
Q 025755            1 MSGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEG-ASENLQLFKTDLLDYEALCAATA---   76 (248)
Q Consensus         1 m~~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Di~d~~~~~~~~~---   76 (248)
                      |+++++|++|||||+||||+++++.|+++|++|++++|+.+.. ....+.+.. ...++.++++|++|.++++++++   
T Consensus        15 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~-~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   93 (266)
T 4egf_A           15 VLRLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSEL-DAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAA   93 (266)
T ss_dssp             GGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHH
Confidence            3457899999999999999999999999999999999986432 222233322 24679999999999999888775   


Q ss_pred             ----CCCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHHhc----C-CCEEEEEeccceeccCCCCCCCCc
Q 025755           77 ----GCTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCVKA----K-VKRVVVVSSIGAVMLNPNWPKGQV  143 (248)
Q Consensus        77 ----~id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~~~----~-~~~iV~vSS~~~~~~~~~~~~~~~  143 (248)
                          ++|+||||||.......    .+.|+..+++|+.++.++++++.+.    + .++||++||..++.+.+..     
T Consensus        94 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-----  168 (266)
T 4egf_A           94 EAFGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAPLPDH-----  168 (266)
T ss_dssp             HHHTSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTC-----
T ss_pred             HHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhccCCCCC-----
Confidence                68999999998654321    2345678999999999998887653    3 5799999998877665432     


Q ss_pred             cCCCCCCchhhhccccchHHHHHHHHHHH----HHHHHHhCCccEEEEccCeeecCCCCCCCCccHHHHHHHHc----CC
Q 025755          144 MDEECWSDEEFCKATENYYCLAKTIAEIQ----ALEYAKRGELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLK----GF  215 (248)
Q Consensus       144 ~~e~~~~~~~~~~~~~~~Y~~sK~~~e~l----~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~----~~  215 (248)
                                      ..|+.||++.+.+    +.+++++ +++||+|+||.+.+|+...... .......+..    ++
T Consensus       169 ----------------~~Y~asK~a~~~l~~~la~e~~~~-gI~vn~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~p~~r  230 (266)
T 4egf_A          169 ----------------YAYCTSKAGLVMATKVLARELGPH-GIRANSVCPTVVLTEMGQRVWG-DEAKSAPMIARIPLGR  230 (266)
T ss_dssp             ----------------HHHHHHHHHHHHHHHHHHHHHGGG-TEEEEEEEESCBCSHHHHHHTC-SHHHHHHHHTTCTTSS
T ss_pred             ----------------hHHHHHHHHHHHHHHHHHHHHhhh-CeEEEEEEeCCCcCchhhhhcc-ChHHHHHHHhcCCCCC
Confidence                            3399999755554    4555444 5999999999999986432100 0111111111    11


Q ss_pred             ------------CCCCCCCchhhhhhhhhccceeE
Q 025755          216 ------------FFTTPSHSYMLERTLVLNQGVRL  238 (248)
Q Consensus       216 ------------~l~~~~~~~~~g~~l~vd~g~~~  238 (248)
                                  |+.++.+.|+||+++.||||+.+
T Consensus       231 ~~~p~dva~~v~~L~s~~~~~itG~~i~vdGG~~~  265 (266)
T 4egf_A          231 FAVPHEVSDAVVWLASDAASMINGVDIPVDGGYTM  265 (266)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             CcCHHHHHHHHHHHhCchhcCccCcEEEECCCccC
Confidence                        77788889999999999999753

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=100.00  E-value=1.5e-33  Score=232.22  Aligned_cols=216  Identities=18%  Similarity=0.112  Sum_probs=157.7

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCC-----------chhhHHhhhhcCCCCCeEEEEccCCCHHHH
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPC-----------DEKNAHLKKLEGASENLQLFKTDLLDYEAL   71 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~-----------~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~   71 (248)
                      .+++|++|||||+||||+++++.|+++|++|++++|+..           +......+.+.....++.++++|++|.+++
T Consensus        10 ~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   89 (278)
T 3sx2_A           10 PLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESL   89 (278)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHH
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHH
Confidence            478999999999999999999999999999999998731           111222222333356899999999999999


Q ss_pred             HHHhC-------CCCEEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhc----C-CCEEEEEeccceeccCCCCC
Q 025755           72 CAATA-------GCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKA----K-VKRVVVVSSIGAVMLNPNWP  139 (248)
Q Consensus        72 ~~~~~-------~id~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~----~-~~~iV~vSS~~~~~~~~~~~  139 (248)
                      +++++       ++|+||||||........+.|..++++|+.++.++++++.+.    + .++||++||..++.+...  
T Consensus        90 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--  167 (278)
T 3sx2_A           90 SAALQAGLDELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVGS--  167 (278)
T ss_dssp             HHHHHHHHHHHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCCC--
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHhcCCCcc--
Confidence            88876       789999999987655444567789999999999999987553    3 579999999876654311  


Q ss_pred             CCCccCCCCCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCCC--------------
Q 025755          140 KGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTIN--------------  202 (248)
Q Consensus       140 ~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~~--------------  202 (248)
                               +..      ....|+.||++.+.+.+.++.+   .+|+||+|+||.+++|+......              
T Consensus       168 ---------~~~------~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~  232 (278)
T 3sx2_A          168 ---------ADP------GSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNEFTREWLAKMAAATDTP  232 (278)
T ss_dssp             ---------SSH------HHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHHHHHHHCC--
T ss_pred             ---------CCC------CchHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccchhhhHHHHHhhccchhhhh
Confidence                     000      1244999997555555554433   25999999999999998653100              


Q ss_pred             -----------ccHHHHHHHHcCCCCCCCCCchhhhhhhhhcccee
Q 025755          203 -----------TSSLLLLGFLKGFFFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       203 -----------~~~~~~~~~~~~~~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                                 ..+.-+.....  ++.++...|+||+++.||||+.
T Consensus       233 ~~~~~~~p~~~~~p~dvA~~v~--~l~s~~~~~itG~~i~vdGG~~  276 (278)
T 3sx2_A          233 GAMGNAMPVEVLAPEDVANAVA--WLVSDQARYITGVTLPVDAGFL  276 (278)
T ss_dssp             CTTSCSSSCSSBCHHHHHHHHH--HHTSGGGTTCCSCEEEESTTTT
T ss_pred             hhhhhhcCcCcCCHHHHHHHHH--HHhCcccccccCCEEeECCCcc
Confidence                       00111111111  7777888999999999999974

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=100.00  E-value=1.1e-33  Score=231.73  Aligned_cols=212  Identities=18%  Similarity=0.219  Sum_probs=158.1

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC------
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA------   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~------   76 (248)
                      ++++|+++||||+||||+++++.|+++|++|++..+...+......+.+.....++.++.+|++|.++++++++      
T Consensus        23 ~l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~  102 (267)
T 4iiu_A           23 NAMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQH  102 (267)
T ss_dssp             --CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHh
Confidence            46789999999999999999999999999998876554333344444454456789999999999999888876      


Q ss_pred             -CCCEEEEccccCCCCC----CCCccccchhhhHHHHHHHHHHHH-----hcCCCEEEEEeccceeccCCCCCCCCccCC
Q 025755           77 -GCTGVFHVACPVPVGK----VPNPEVQLIDPAVVGTKNVLNSCV-----KAKVKRVVVVSSIGAVMLNPNWPKGQVMDE  146 (248)
Q Consensus        77 -~id~vi~~ag~~~~~~----~~~~~~~~~~~n~~g~~~~~~~~~-----~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e  146 (248)
                       ++|+||||||......    ..+.+...+++|+.++.++++++.     +.+.++||++||..++.+.+..        
T Consensus       103 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~--------  174 (267)
T 4iiu_A          103 GAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVMGNRGQ--------  174 (267)
T ss_dssp             CCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHHCCTTC--------
T ss_pred             CCccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhccCCCCC--------
Confidence             6899999999875432    234457789999999999988874     4466899999998877766543        


Q ss_pred             CCCCchhhhccccchHHHHHH----HHHHHHHHHHHhCCccEEEEccCeeecCCCCCCCCccHHHHHHHHcCC-------
Q 025755          147 ECWSDEEFCKATENYYCLAKT----IAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKGF-------  215 (248)
Q Consensus       147 ~~~~~~~~~~~~~~~Y~~sK~----~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~~~-------  215 (248)
                                   ..|+.||+    +++.++.++.++ ++++++|+||.+.+++.................++       
T Consensus       175 -------------~~Y~asKaa~~~~~~~la~e~~~~-gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~p~~~~~~~edv  240 (267)
T 4iiu_A          175 -------------VNYSAAKAGIIGATKALAIELAKR-KITVNCIAPGLIDTGMIEMEESALKEAMSMIPMKRMGQAEEV  240 (267)
T ss_dssp             -------------HHHHHHHHHHHHHHHHHHHHHGGG-TEEEEEEEECSBCSTTCCCCHHHHHHHHHTCTTCSCBCHHHH
T ss_pred             -------------chhHHHHHHHHHHHHHHHHHHhhc-CeEEEEEEEeeecCCcccccHHHHHHHHhcCCCCCCcCHHHH
Confidence                         33999997    555556666554 59999999999999987543111111111111111       


Q ss_pred             -----CCCCCCCchhhhhhhhhccce
Q 025755          216 -----FFTTPSHSYMLERTLVLNQGV  236 (248)
Q Consensus       216 -----~l~~~~~~~~~g~~l~vd~g~  236 (248)
                           ++.++...|++|+++.||||+
T Consensus       241 a~~~~~L~s~~~~~itG~~i~vdGG~  266 (267)
T 4iiu_A          241 AGLASYLMSDIAGYVTRQVISINGGM  266 (267)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             HHHHHHHhCCcccCccCCEEEeCCCc
Confidence                 677777899999999999996

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=100.00  E-value=3.7e-34  Score=244.91  Aligned_cols=233  Identities=15%  Similarity=0.154  Sum_probs=178.1

Q ss_pred             CCCCCCcEEEEEcCccHHHHHHHHHHHHC-CCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCC-CHHHHHHHhCCC
Q 025755            1 MSGEDKERVCVTGAGGYIASWLVKYLLLK-GYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLL-DYEALCAATAGC   78 (248)
Q Consensus         1 m~~l~~k~vlVtG~~g~iG~~~~~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~-d~~~~~~~~~~i   78 (248)
                      |..++||+|+||||+|+||+++++.|+++ |++|++++|+.......     . ...++.++.+|++ |.+.+.++++++
T Consensus        19 ~~~m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~-----~-~~~~v~~~~~Dl~~d~~~~~~~~~~~   92 (372)
T 3slg_A           19 PGSMKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDL-----V-KHERMHFFEGDITINKEWVEYHVKKC   92 (372)
T ss_dssp             ----CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGG-----G-GSTTEEEEECCTTTCHHHHHHHHHHC
T ss_pred             CcccCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhh-----c-cCCCeEEEeCccCCCHHHHHHHhccC
Confidence            34477899999999999999999999998 99999999987432111     1 1358999999999 999999999999


Q ss_pred             CEEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCc-hhhhcc
Q 025755           79 TGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSD-EEFCKA  157 (248)
Q Consensus        79 d~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~-~~~~~~  157 (248)
                      |+|||+|+..........+..++++|+.++.++++++++.+ ++|||+||.. +|+...   ..+++|+++.. ......
T Consensus        93 d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~v~~SS~~-vyg~~~---~~~~~e~~~~~~~~p~~~  167 (372)
T 3slg_A           93 DVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG-KHLVFPSTSE-VYGMCA---DEQFDPDASALTYGPINK  167 (372)
T ss_dssp             SEEEECBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHT-CEEEEECCGG-GGBSCC---CSSBCTTTCCEEECCTTC
T ss_pred             CEEEEcCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhC-CcEEEeCcHH-HhCCCC---CCCCCccccccccCCCCC
Confidence            99999999765432223446788999999999999999998 9999999955 555532   45667766442 122224


Q ss_pred             ccchHHHHHHHHHHHHHHHHHhCCccEEEEccCeeecCCCCCC-------CCccHHHHHHHHcCCCCCCCCCchhhhhhh
Q 025755          158 TENYYCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPT-------INTSSLLLLGFLKGFFFTTPSHSYMLERTL  230 (248)
Q Consensus       158 ~~~~Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~-------~~~~~~~~~~~~~~~~l~~~~~~~~~g~~l  230 (248)
                      |.+.|+.+|..+|.++..++.+ +++++++||+++|||.....       ......++..+..+..+....++....+.+
T Consensus       168 p~~~Y~~sK~~~E~~~~~~~~~-g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i  246 (372)
T 3slg_A          168 PRWIYACSKQLMDRVIWGYGME-GLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGENISLVDGGSQKRAFT  246 (372)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHTT-TCEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHHHHHHTCCEEEGGGGCCEEECE
T ss_pred             CCCcHHHHHHHHHHHHHHHHHC-CCCEEEEccccccCCCcccccccccccchHHHHHHHHHHcCCCcEEeCCCceEEEEE
Confidence            5567999999999999999988 79999999999999986531       224567778888887665555555555778


Q ss_pred             hhccceeEEEeeccC
Q 025755          231 VLNQGVRLYRCKIQI  245 (248)
Q Consensus       231 ~vd~g~~~~~~~~~~  245 (248)
                      ++++...++..++..
T Consensus       247 ~v~Dva~a~~~~~~~  261 (372)
T 3slg_A          247 YVDDGISALMKIIEN  261 (372)
T ss_dssp             EHHHHHHHHHHHHHC
T ss_pred             EHHHHHHHHHHHHhc
Confidence            888887776665543

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=100.00  E-value=1.6e-33  Score=229.29  Aligned_cols=212  Identities=14%  Similarity=0.072  Sum_probs=157.9

Q ss_pred             CCCCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC----
Q 025755            1 MSGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA----   76 (248)
Q Consensus         1 m~~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~----   76 (248)
                      |..+++|+++||||+||||++++++|+++|++|++++|+.+. .....+.+   ..++.++.+|++|.++++++++    
T Consensus         3 m~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~-~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~   78 (255)
T 4eso_A            3 MGNYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESN-IARIREEF---GPRVHALRSDIADLNEIAVLGAAAGQ   78 (255)
T ss_dssp             -CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHH-HHHHHHHH---GGGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHHh---CCcceEEEccCCCHHHHHHHHHHHHH
Confidence            445889999999999999999999999999999999998642 22222222   3578999999999999887765    


Q ss_pred             ---CCCEEEEccccCCCCC----CCCccccchhhhHHHHHHHHHHHHhc--CCCEEEEEeccceeccCCCCCCCCccCCC
Q 025755           77 ---GCTGVFHVACPVPVGK----VPNPEVQLIDPAVVGTKNVLNSCVKA--KVKRVVVVSSIGAVMLNPNWPKGQVMDEE  147 (248)
Q Consensus        77 ---~id~vi~~ag~~~~~~----~~~~~~~~~~~n~~g~~~~~~~~~~~--~~~~iV~vSS~~~~~~~~~~~~~~~~~e~  147 (248)
                         ++|++|||||......    ..+.|+..+++|+.++.++++++.+.  +.++||++||..+..+.+..         
T Consensus        79 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~---------  149 (255)
T 4eso_A           79 TLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADEGGHPGM---------  149 (255)
T ss_dssp             HHSSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGGSSBCTTB---------
T ss_pred             HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhhcCCCCCc---------
Confidence               6899999999865432    23445778999999999999999875  34799999998877665432         


Q ss_pred             CCCchhhhccccchHHHHHHHHHHHHHHHHHhC---CccEEEEccCeeecCCCCCCCCc---cHHHHHH----HHcCC--
Q 025755          148 CWSDEEFCKATENYYCLAKTIAEIQALEYAKRG---ELDIVTVCPSIVIGPMLQPTINT---SSLLLLG----FLKGF--  215 (248)
Q Consensus       148 ~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~---~i~v~~vrpg~i~g~~~~~~~~~---~~~~~~~----~~~~~--  215 (248)
                                  ..|+.||++.+.+.+.++.++   |++||+|+||.+.+|+.......   ...+...    ...++  
T Consensus       150 ------------~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~  217 (255)
T 4eso_A          150 ------------SVYSASKAALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNITPMKRNG  217 (255)
T ss_dssp             ------------HHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEEECSBCCSSTTCTTSCHHHHHHHHHHHHHHSTTSSCB
T ss_pred             ------------hHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEecCcccCcccccccCChhhHHHHHHHHhccCCCCCCc
Confidence                        349999986666665555443   69999999999999976432100   0111111    11111  


Q ss_pred             ----------CCCCCCCchhhhhhhhhccceeE
Q 025755          216 ----------FFTTPSHSYMLERTLVLNQGVRL  238 (248)
Q Consensus       216 ----------~l~~~~~~~~~g~~l~vd~g~~~  238 (248)
                                |+.++ +.|+||+++.||||...
T Consensus       218 ~pedvA~~v~~L~s~-~~~itG~~i~vdGG~~~  249 (255)
T 4eso_A          218 TADEVARAVLFLAFE-ATFTTGAKLAVDGGLGQ  249 (255)
T ss_dssp             CHHHHHHHHHHHHHT-CTTCCSCEEEESTTTTT
T ss_pred             CHHHHHHHHHHHcCc-CcCccCCEEEECCCccc
Confidence                      67777 89999999999999763

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=9.3e-34  Score=231.89  Aligned_cols=213  Identities=17%  Similarity=0.139  Sum_probs=157.6

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC------
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA------   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~------   76 (248)
                      .+++|+++||||+||||+++++.|+++|++|++++|+.+. .....+.+.....++.++.+|++|.++++++++      
T Consensus         8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   86 (264)
T 3ucx_A            8 LLTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVER-LEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAY   86 (264)
T ss_dssp             TTTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHH-HHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CcCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHH-HHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            3689999999999999999999999999999999998642 233334444445789999999999999888875      


Q ss_pred             -CCCEEEEccccCCCC-----CCCCccccchhhhHHHHHHHHHHHHhc---CCCEEEEEeccceeccCCCCCCCCccCCC
Q 025755           77 -GCTGVFHVACPVPVG-----KVPNPEVQLIDPAVVGTKNVLNSCVKA---KVKRVVVVSSIGAVMLNPNWPKGQVMDEE  147 (248)
Q Consensus        77 -~id~vi~~ag~~~~~-----~~~~~~~~~~~~n~~g~~~~~~~~~~~---~~~~iV~vSS~~~~~~~~~~~~~~~~~e~  147 (248)
                       ++|+||||||.....     ...+.|+..+++|+.++.++++++.+.   +.++||++||..+..+.+..         
T Consensus        87 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~---------  157 (264)
T 3ucx_A           87 GRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESKGAVVNVNSMVVRHSQAKY---------  157 (264)
T ss_dssp             SCCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHTCEEEEECCGGGGCCCTTC---------
T ss_pred             CCCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEECcchhccCCCcc---------
Confidence             689999999875322     112445778999999999999887653   23799999998877665432         


Q ss_pred             CCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCC--------CccHHHHHHHHcCC-
Q 025755          148 CWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTI--------NTSSLLLLGFLKGF-  215 (248)
Q Consensus       148 ~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~--------~~~~~~~~~~~~~~-  215 (248)
                                  ..|+.||+..+.+.+.++.+   .|++||+|+||.+++|+.....        ............+. 
T Consensus       158 ------------~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p  225 (264)
T 3ucx_A          158 ------------GAYKMAKSALLAMSQTLATELGEKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGSD  225 (264)
T ss_dssp             ------------HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSS
T ss_pred             ------------HHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccccHHHHHHhhhhhcCCCHHHHHHHHhccCC
Confidence                        23999997655555555443   4699999999999998643210        00111122222111 


Q ss_pred             ---------------CCCCCCCchhhhhhhhhcccee
Q 025755          216 ---------------FFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       216 ---------------~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                                     ++.++.+.|+||+++.||||..
T Consensus       226 ~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~  262 (264)
T 3ucx_A          226 LKRLPTEDEVASAILFMASDLASGITGQALDVNCGEY  262 (264)
T ss_dssp             SSSCCBHHHHHHHHHHHHSGGGTTCCSCEEEESTTSS
T ss_pred             cccCCCHHHHHHHHHHHcCccccCCCCCEEEECCCcc
Confidence                           7778888999999999999974

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=100.00  E-value=5e-34  Score=236.95  Aligned_cols=215  Identities=15%  Similarity=0.056  Sum_probs=156.3

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCch-hhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-----
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDE-KNAHLKKLEGASENLQLFKTDLLDYEALCAATA-----   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-----   76 (248)
                      ++++|++|||||+||||++++++|+++|++|++++|+.... .....+.+.....++.++.+|++|.++++++++     
T Consensus        46 ~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  125 (294)
T 3r3s_A           46 RLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREA  125 (294)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            46889999999999999999999999999999998874322 222222233345689999999999999888775     


Q ss_pred             --CCCEEEEccccCCCCC-----CCCccccchhhhHHHHHHHHHHHHhc--CCCEEEEEeccceeccCCCCCCCCccCCC
Q 025755           77 --GCTGVFHVACPVPVGK-----VPNPEVQLIDPAVVGTKNVLNSCVKA--KVKRVVVVSSIGAVMLNPNWPKGQVMDEE  147 (248)
Q Consensus        77 --~id~vi~~ag~~~~~~-----~~~~~~~~~~~n~~g~~~~~~~~~~~--~~~~iV~vSS~~~~~~~~~~~~~~~~~e~  147 (248)
                        ++|+||||||......     ..+.|+..+++|+.|+.++++++.+.  +.++||++||..++.+.+..         
T Consensus       126 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~~---------  196 (294)
T 3r3s_A          126 LGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQAYQPSPHL---------  196 (294)
T ss_dssp             HTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGGGTSCCTTC---------
T ss_pred             cCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChhhccCCCCc---------
Confidence              6899999999754221     23445778999999999999999876  34699999998877665432         


Q ss_pred             CCCchhhhccccchHHHHHHHHHHHHHHHHHhC---CccEEEEccCeeecCCCCCC---CCccHHHHHHHHcC-------
Q 025755          148 CWSDEEFCKATENYYCLAKTIAEIQALEYAKRG---ELDIVTVCPSIVIGPMLQPT---INTSSLLLLGFLKG-------  214 (248)
Q Consensus       148 ~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~---~i~v~~vrpg~i~g~~~~~~---~~~~~~~~~~~~~~-------  214 (248)
                                  ..|+.||++.+.+.+.++.++   |++||+|+||.+++++....   ......+......+       
T Consensus       197 ------------~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~r~~~p~d  264 (294)
T 3r3s_A          197 ------------LDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAGQPAE  264 (294)
T ss_dssp             ------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHTTTSCGGGSTTTTTTSTTSSCBCGGG
T ss_pred             ------------hHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCccccccccCCCHHHHHHHHhcCCCCCCcCHHH
Confidence                        339999976555555554432   59999999999999862110   00000000000001       


Q ss_pred             -----CCCCCCCCchhhhhhhhhccceeE
Q 025755          215 -----FFFTTPSHSYMLERTLVLNQGVRL  238 (248)
Q Consensus       215 -----~~l~~~~~~~~~g~~l~vd~g~~~  238 (248)
                           .++.++.+.|+||+++.||||..+
T Consensus       265 vA~~v~~L~s~~~~~itG~~i~vdGG~~l  293 (294)
T 3r3s_A          265 LAPVYVYLASQESSYVTAEVHGVCGGEHL  293 (294)
T ss_dssp             GHHHHHHHHSGGGTTCCSCEEEESTTCCC
T ss_pred             HHHHHHHHhCccccCCCCCEEEECCCccC
Confidence                 167778889999999999999764

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=100.00  E-value=6e-34  Score=234.60  Aligned_cols=213  Identities=16%  Similarity=0.110  Sum_probs=156.1

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcC-CCCCeEEEEccCCCHHHHHHHhC-----
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEG-ASENLQLFKTDLLDYEALCAATA-----   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Di~d~~~~~~~~~-----   76 (248)
                      .+++|+++||||+||||+++++.|+++|++|++++|+.... ....+.+.. ...++.++++|++|.++++++++     
T Consensus        24 ~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  102 (277)
T 4fc7_A           24 LLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRV-LTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKE  102 (277)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHH-HHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            37899999999999999999999999999999999986432 222222221 24678999999999999888876     


Q ss_pred             --CCCEEEEccccCCCCC----CCCccccchhhhHHHHHHHHHHHHh----cCCCEEEEEeccceeccCCCCCCCCccCC
Q 025755           77 --GCTGVFHVACPVPVGK----VPNPEVQLIDPAVVGTKNVLNSCVK----AKVKRVVVVSSIGAVMLNPNWPKGQVMDE  146 (248)
Q Consensus        77 --~id~vi~~ag~~~~~~----~~~~~~~~~~~n~~g~~~~~~~~~~----~~~~~iV~vSS~~~~~~~~~~~~~~~~~e  146 (248)
                        ++|+||||||......    ..+.|..++++|+.++.++++++.+    .+.++||++||..+..+.+..        
T Consensus       103 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~--------  174 (277)
T 4fc7_A          103 FGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRGQALQ--------  174 (277)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHHHHTCTTC--------
T ss_pred             cCCCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCCCc--------
Confidence              6899999999754332    2344577899999999999998854    356799999998877766543        


Q ss_pred             CCCCchhhhccccchHHHHHHHHHHH----HHHHHHhCCccEEEEccCeeecCCCCCCCCccHHHHHHHHc----CC---
Q 025755          147 ECWSDEEFCKATENYYCLAKTIAEIQ----ALEYAKRGELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLK----GF---  215 (248)
Q Consensus       147 ~~~~~~~~~~~~~~~Y~~sK~~~e~l----~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~----~~---  215 (248)
                                   ..|+.||++.+.+    +.+++++ |++||+|+||.+.+++.................    ++   
T Consensus       175 -------------~~Y~asKaa~~~l~~~la~e~~~~-gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~~r~~~  240 (277)
T 4fc7_A          175 -------------VHAGSAKAAVDAMTRHLAVEWGPQ-NIRVNSLAPGPISGTEGLRRLGGPQASLSTKVTASPLQRLGN  240 (277)
T ss_dssp             -------------HHHHHHHHHHHHHHHHHHHHHGGG-TEEEEEEEECCBSSSHHHHHHSCCHHHHHHHHHTSTTSSCBC
T ss_pred             -------------HHHHHHHHHHHHHHHHHHHHhhhc-CeEEEEEEECCEecchhhhhccCCHHHHHHHhccCCCCCCcC
Confidence                         2399999755555    4455444 599999999999997421110011111111111    11   


Q ss_pred             ---------CCCCCCCchhhhhhhhhccceeE
Q 025755          216 ---------FFTTPSHSYMLERTLVLNQGVRL  238 (248)
Q Consensus       216 ---------~l~~~~~~~~~g~~l~vd~g~~~  238 (248)
                               |+.++.+.|+||+++.||||..+
T Consensus       241 p~dvA~~v~fL~s~~~~~itG~~i~vdGG~~~  272 (277)
T 4fc7_A          241 KTEIAHSVLYLASPLASYVTGAVLVADGGAWL  272 (277)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESTTHHH
T ss_pred             HHHHHHHHHHHcCCccCCcCCCEEEECCCccc
Confidence                     77788889999999999999753

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=100.00  E-value=1.3e-33  Score=233.02  Aligned_cols=214  Identities=19%  Similarity=0.162  Sum_probs=157.2

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCC---CCeEEEEccCCCHHHHHHHhC---
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGAS---ENLQLFKTDLLDYEALCAATA---   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~~Di~d~~~~~~~~~---   76 (248)
                      ++++|+++||||+||||+++++.|+++|++|++++|+.+. .....+.+....   .++.++.+|++|.++++++++   
T Consensus         8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~-~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   86 (281)
T 3svt_A            8 SFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDK-LAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVT   86 (281)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHH-HHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHH
Confidence            4789999999999999999999999999999999998643 223333333322   378999999999999888875   


Q ss_pred             ----CCCEEEEccccCCCC-----CCCCccccchhhhHHHHHHHHHHHHhc----CCCEEEEEeccceeccCCCCCCCCc
Q 025755           77 ----GCTGVFHVACPVPVG-----KVPNPEVQLIDPAVVGTKNVLNSCVKA----KVKRVVVVSSIGAVMLNPNWPKGQV  143 (248)
Q Consensus        77 ----~id~vi~~ag~~~~~-----~~~~~~~~~~~~n~~g~~~~~~~~~~~----~~~~iV~vSS~~~~~~~~~~~~~~~  143 (248)
                          ++|+||||||.....     ...+.|+..+++|+.|+.++++++.+.    +.++||++||..++.+.+...    
T Consensus        87 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~----  162 (281)
T 3svt_A           87 AWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTHRWFG----  162 (281)
T ss_dssp             HHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCTTCT----
T ss_pred             HHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcCCCCCCh----
Confidence                689999999973321     112345678999999999998887653    557999999988776654433    


Q ss_pred             cCCCCCCchhhhccccchHHHHHHHHHHHHHHHHHhC---CccEEEEccCeeecCCCCCCCCccHHHHHHHH----cCC-
Q 025755          144 MDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKRG---ELDIVTVCPSIVIGPMLQPTINTSSLLLLGFL----KGF-  215 (248)
Q Consensus       144 ~~e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~---~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~----~~~-  215 (248)
                                       .|+.||++.+.+.+.++.++   +++||+|+||.+++|+...... .........    .++ 
T Consensus       163 -----------------~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~-~~~~~~~~~~~~p~~r~  224 (281)
T 3svt_A          163 -----------------AYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAITE-SAELSSDYAMCTPLPRQ  224 (281)
T ss_dssp             -----------------HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHT-CHHHHHHHHHHCSSSSC
T ss_pred             -----------------hHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhccc-CHHHHHHHHhcCCCCCC
Confidence                             39999986666655555432   4999999999999997542100 011111111    111 


Q ss_pred             -----------CCCCCCCchhhhhhhhhccceeEE
Q 025755          216 -----------FFTTPSHSYMLERTLVLNQGVRLY  239 (248)
Q Consensus       216 -----------~l~~~~~~~~~g~~l~vd~g~~~~  239 (248)
                                 ++.++...|++|+++.||||....
T Consensus       225 ~~~~dva~~~~~l~s~~~~~itG~~~~vdgG~~~~  259 (281)
T 3svt_A          225 GEVEDVANMAMFLLSDAASFVTGQVINVDGGQMLR  259 (281)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGS
T ss_pred             CCHHHHHHHHHHHhCcccCCCCCCEEEeCCChhcc
Confidence                       677777899999999999997643

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=100.00  E-value=7.4e-34  Score=233.16  Aligned_cols=210  Identities=20%  Similarity=0.169  Sum_probs=156.7

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC------
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA------   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~------   76 (248)
                      .+++|++|||||+||||+++++.|+++|++|++++|+... .....+.+.....++.++.+|++|.++++++++      
T Consensus        25 ~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  103 (270)
T 3ftp_A           25 TLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAG-AEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEF  103 (270)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHH-HHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHc
Confidence            3788999999999999999999999999999999997642 222233333334678899999999999888876      


Q ss_pred             -CCCEEEEccccCCCCC----CCCccccchhhhHHHHHHHHHHHHh----cCCCEEEEEeccceeccCCCCCCCCccCCC
Q 025755           77 -GCTGVFHVACPVPVGK----VPNPEVQLIDPAVVGTKNVLNSCVK----AKVKRVVVVSSIGAVMLNPNWPKGQVMDEE  147 (248)
Q Consensus        77 -~id~vi~~ag~~~~~~----~~~~~~~~~~~n~~g~~~~~~~~~~----~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~  147 (248)
                       ++|+||||||......    ..+.|+..+++|+.|+.++++++.+    .+.++||++||..+..+.+..         
T Consensus       104 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~---------  174 (270)
T 3ftp_A          104 GALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAGNPGQ---------  174 (270)
T ss_dssp             SCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTB---------
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCCCc---------
Confidence             6899999999765432    1244567899999999999888754    366899999998877766442         


Q ss_pred             CCCchhhhccccchHHHHHH----HHHHHHHHHHHhCCccEEEEccCeeecCCCCCCCCc---------------cHHHH
Q 025755          148 CWSDEEFCKATENYYCLAKT----IAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTINT---------------SSLLL  208 (248)
Q Consensus       148 ~~~~~~~~~~~~~~Y~~sK~----~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~~---------------~~~~~  208 (248)
                                  ..|+.||+    +++.++.+++++ |++||+|+||.+.+++.......               .+.-+
T Consensus       175 ------------~~Y~asKaa~~~l~~~la~e~~~~-gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~p~~r~~~pedv  241 (270)
T 3ftp_A          175 ------------VNYAAAKAGVAGMTRALAREIGSR-GITVNCVAPGFIDTDMTKGLPQEQQTALKTQIPLGRLGSPEDI  241 (270)
T ss_dssp             ------------HHHHHHHHHHHHHHHHHHHHHGGG-TEEEEEEEECSBCSHHHHHSCHHHHHHHHTTCTTCSCBCHHHH
T ss_pred             ------------hhHHHHHHHHHHHHHHHHHHHhhh-CeEEEEEEeCCCcCcchhhcCHHHHHHHHhcCCCCCCCCHHHH
Confidence                        33999997    455555555544 59999999999999864321100               11111


Q ss_pred             HHHHcCCCCCCCCCchhhhhhhhhcccee
Q 025755          209 LGFLKGFFFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       209 ~~~~~~~~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                      .....  ++.++...|++|+++.||||+.
T Consensus       242 A~~v~--~L~s~~~~~itG~~i~vdGG~~  268 (270)
T 3ftp_A          242 AHAVA--FLASPQAGYITGTTLHVNGGMF  268 (270)
T ss_dssp             HHHHH--HHHSGGGTTCCSCEEEESTTSS
T ss_pred             HHHHH--HHhCCCcCCccCcEEEECCCcc
Confidence            11111  6777888999999999999975

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=100.00  E-value=2.4e-33  Score=230.96  Aligned_cols=213  Identities=15%  Similarity=0.112  Sum_probs=157.1

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCC------------CchhhHHhhhhcCCCCCeEEEEccCCCHHH
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDP------------CDEKNAHLKKLEGASENLQLFKTDLLDYEA   70 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~------------~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~   70 (248)
                      ++++|+++||||++|||+++++.|+++|++|++++|+.            .+......+.+.....++.++.+|++|.++
T Consensus         8 ~l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   87 (277)
T 3tsc_A            8 KLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDR   87 (277)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHH
T ss_pred             ccCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHH
Confidence            57899999999999999999999999999999999842            111222233333445789999999999999


Q ss_pred             HHHHhC-------CCCEEEEccccCCCCC----CCCccccchhhhHHHHHHHHHHHHhc----C-CCEEEEEeccceecc
Q 025755           71 LCAATA-------GCTGVFHVACPVPVGK----VPNPEVQLIDPAVVGTKNVLNSCVKA----K-VKRVVVVSSIGAVML  134 (248)
Q Consensus        71 ~~~~~~-------~id~vi~~ag~~~~~~----~~~~~~~~~~~n~~g~~~~~~~~~~~----~-~~~iV~vSS~~~~~~  134 (248)
                      ++++++       ++|+||||||......    ..+.|+..+++|+.++.++++++.+.    + .++||++||..++.+
T Consensus        88 v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~  167 (277)
T 3tsc_A           88 LRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKM  167 (277)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHhhCCC
Confidence            888875       5899999999876532    23455778999999999988886543    3 579999999887766


Q ss_pred             CCCCCCCCccCCCCCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCC-----------
Q 025755          135 NPNWPKGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPT-----------  200 (248)
Q Consensus       135 ~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~-----------  200 (248)
                      .+..                     ..|+.||++.+.+.+.++.+   .|++||+|+||.+.+|+....           
T Consensus       168 ~~~~---------------------~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~  226 (277)
T 3tsc_A          168 QPFM---------------------IHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSGDMVTAVGQAMET  226 (277)
T ss_dssp             CSSC---------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGGSHHHHHHHHHHHHT
T ss_pred             CCCc---------------------hhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCcccchhhhhhhhcccc
Confidence            5442                     23999997555555444433   259999999999999875320           


Q ss_pred             -C-------------CccHHHHHHHHcCCCCCCCCCchhhhhhhhhccceeE
Q 025755          201 -I-------------NTSSLLLLGFLKGFFFTTPSHSYMLERTLVLNQGVRL  238 (248)
Q Consensus       201 -~-------------~~~~~~~~~~~~~~~l~~~~~~~~~g~~l~vd~g~~~  238 (248)
                       .             ...+.-+.....  |+.++.+.|+||+++.||||..+
T Consensus       227 ~~~~~~~~~~~~p~r~~~pedvA~~v~--~L~s~~~~~itG~~i~vdGG~~~  276 (277)
T 3tsc_A          227 NPQLSHVLTPFLPDWVAEPEDIADTVC--WLASDESRKVTAAQIPVDQGSTQ  276 (277)
T ss_dssp             CGGGTTTTCCSSSCSCBCHHHHHHHHH--HHHSGGGTTCCSCEEEESTTGGG
T ss_pred             cHHHHHHhhhccCCCCCCHHHHHHHHH--HHhCccccCCcCCEEeeCCCccc
Confidence             0             001111111111  77888889999999999999764

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=100.00  E-value=3.3e-33  Score=237.38  Aligned_cols=229  Identities=17%  Similarity=0.116  Sum_probs=171.5

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhh---HHhhhhcC-CCCCeEEEEccCCCHHHHHHHhCCCC
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKN---AHLKKLEG-ASENLQLFKTDLLDYEALCAATAGCT   79 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~---~~~~~~~~-~~~~~~~~~~Di~d~~~~~~~~~~id   79 (248)
                      +++|+||||||+||||++++++|+++|++|++++|+......   ...+.+.. ...++.++.+|++|.+++.++++++|
T Consensus        25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d  104 (352)
T 1sb8_A           25 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGVD  104 (352)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTCS
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhcCCC
Confidence            567899999999999999999999999999999997642111   11111100 02578999999999999999999999


Q ss_pred             EEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhcccc
Q 025755           80 GVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATE  159 (248)
Q Consensus        80 ~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~  159 (248)
                      +|||+||..........+...+++|+.++.++++++.+.+.++|||+||..++ +...   ..+++|+++..+      .
T Consensus       105 ~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~-~~~~---~~~~~E~~~~~~------~  174 (352)
T 1sb8_A          105 YVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTY-GDHP---GLPKVEDTIGKP------L  174 (352)
T ss_dssp             EEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGG-TTCC---CSSBCTTCCCCC------C
T ss_pred             EEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhc-CCCC---CCCCCCCCCCCC------C
Confidence            99999997543211234567899999999999999999998999999997654 3321   456777776543      4


Q ss_pred             chHHHHHHHHHHHHHHHHHhCCccEEEEccCeeecCCCCCCC---CccHHHHHHHHcCCCCCCCCCchhhhhhhhhccce
Q 025755          160 NYYCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTI---NTSSLLLLGFLKGFFFTTPSHSYMLERTLVLNQGV  236 (248)
Q Consensus       160 ~~Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~---~~~~~~~~~~~~~~~l~~~~~~~~~g~~l~vd~g~  236 (248)
                      +.|+.+|..+|.++..++.+++++++++||+++|||......   .....++..+..+..+....++....+.+++++..
T Consensus       175 ~~Y~~sK~~~e~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva  254 (352)
T 1sb8_A          175 SPYAVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTV  254 (352)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHH
T ss_pred             ChhHHHHHHHHHHHHHHHHHcCCCEEEEEECceeCcCCCCCcchhhHHHHHHHHHHCCCCcEEeCCCCceEeeEEHHHHH
Confidence            569999999999999998777899999999999999865431   23455667777776554444444444567777766


Q ss_pred             eEEEee
Q 025755          237 RLYRCK  242 (248)
Q Consensus       237 ~~~~~~  242 (248)
                      .++..+
T Consensus       255 ~a~~~~  260 (352)
T 1sb8_A          255 QANLLA  260 (352)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            554433

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=100.00  E-value=3e-33  Score=226.52  Aligned_cols=210  Identities=19%  Similarity=0.185  Sum_probs=158.3

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC------
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA------   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~------   76 (248)
                      ++++|+++||||+||||++++++|+++|++|++++|+... .....+.+.....++.++.+|++|.++++++++      
T Consensus         2 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (247)
T 3lyl_A            2 SLNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQAS-AEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAEN   80 (247)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHH-HHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTT
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence            3889999999999999999999999999999999998642 223333344445689999999999999988875      


Q ss_pred             -CCCEEEEccccCCCCC----CCCccccchhhhHHHHHHHHHHHHh----cCCCEEEEEeccceeccCCCCCCCCccCCC
Q 025755           77 -GCTGVFHVACPVPVGK----VPNPEVQLIDPAVVGTKNVLNSCVK----AKVKRVVVVSSIGAVMLNPNWPKGQVMDEE  147 (248)
Q Consensus        77 -~id~vi~~ag~~~~~~----~~~~~~~~~~~n~~g~~~~~~~~~~----~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~  147 (248)
                       ++|+||||||......    ..+.+...+++|+.++.++++++.+    .+.++||++||..+..+.+..         
T Consensus        81 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~---------  151 (247)
T 3lyl_A           81 LAIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSAGNPGQ---------  151 (247)
T ss_dssp             CCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTC---------
T ss_pred             CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCCCc---------
Confidence             4799999999875432    2344567899999999998888754    466799999998877765442         


Q ss_pred             CCCchhhhccccchHHHHHHHHHH----HHHHHHHhCCccEEEEccCeeecCCCCCCCCccHHHHHHHHcC----C----
Q 025755          148 CWSDEEFCKATENYYCLAKTIAEI----QALEYAKRGELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKG----F----  215 (248)
Q Consensus       148 ~~~~~~~~~~~~~~Y~~sK~~~e~----l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~~----~----  215 (248)
                                  ..|+.||++.+.    ++.++.++ ++++++|+||.+.+++.....   .........+    +    
T Consensus       152 ------------~~Y~~sK~a~~~~~~~la~e~~~~-gi~v~~v~PG~v~t~~~~~~~---~~~~~~~~~~~~~~~~~~~  215 (247)
T 3lyl_A          152 ------------TNYCAAKAGVIGFSKSLAYEVASR-NITVNVVAPGFIATDMTDKLT---DEQKSFIATKIPSGQIGEP  215 (247)
T ss_dssp             ------------HHHHHHHHHHHHHHHHHHHHHGGG-TEEEEEEEECSBCCTTTTTSC---HHHHHHHHTTSTTCCCBCH
T ss_pred             ------------HHHHHHHHHHHHHHHHHHHHHHHc-CeEEEEEeeCcEecccchhcc---HHHHHHHhhcCCCCCCcCH
Confidence                        339999985444    45555444 599999999999999865431   1111111111    1    


Q ss_pred             --------CCCCCCCchhhhhhhhhccceeE
Q 025755          216 --------FFTTPSHSYMLERTLVLNQGVRL  238 (248)
Q Consensus       216 --------~l~~~~~~~~~g~~l~vd~g~~~  238 (248)
                              ++.++...+++|+++.+|||+.+
T Consensus       216 ~dva~~i~~l~s~~~~~~tG~~i~vdgG~~~  246 (247)
T 3lyl_A          216 KDIAAAVAFLASEEAKYITGQTLHVNGGMYM  246 (247)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEESTTSSC
T ss_pred             HHHHHHHHHHhCCCcCCccCCEEEECCCEec
Confidence                    56677788999999999999753

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=100.00  E-value=2.2e-33  Score=233.29  Aligned_cols=213  Identities=12%  Similarity=0.041  Sum_probs=158.2

Q ss_pred             CCCCCcEEEEEcCcc--HHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC---
Q 025755            2 SGEDKERVCVTGAGG--YIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA---   76 (248)
Q Consensus         2 ~~l~~k~vlVtG~~g--~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~---   76 (248)
                      +.+++|+++||||+|  |||+++++.|+++|++|++++|+...  ....+......+.+.++++|++|.++++++++   
T Consensus        26 ~~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~  103 (296)
T 3k31_A           26 MLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETF--KKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLA  103 (296)
T ss_dssp             CTTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGG--HHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHH
T ss_pred             hccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHH--HHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHH
Confidence            347899999999997  99999999999999999999998532  22222222223457899999999999988875   


Q ss_pred             ----CCCEEEEccccCCC----C----CCCCccccchhhhHHHHHHHHHHHHhc--CCCEEEEEeccceeccCCCCCCCC
Q 025755           77 ----GCTGVFHVACPVPV----G----KVPNPEVQLIDPAVVGTKNVLNSCVKA--KVKRVVVVSSIGAVMLNPNWPKGQ  142 (248)
Q Consensus        77 ----~id~vi~~ag~~~~----~----~~~~~~~~~~~~n~~g~~~~~~~~~~~--~~~~iV~vSS~~~~~~~~~~~~~~  142 (248)
                          ++|+||||||....    .    ...+.|...+++|+.++.++++++.+.  ..++||++||..+..+.+...   
T Consensus       104 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~~~~~~~~~~---  180 (296)
T 3k31_A          104 EEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYYGAEKVVPHYN---  180 (296)
T ss_dssp             HHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCCTTTT---
T ss_pred             HHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehhhccCCCCch---
Confidence                68999999998642    1    223456788999999999999999875  347999999988776654433   


Q ss_pred             ccCCCCCCchhhhccccchHHHHHHHHHHH----HHHHHHhCCccEEEEccCeeecCCCCCCCCccHHHHHHH----HcC
Q 025755          143 VMDEECWSDEEFCKATENYYCLAKTIAEIQ----ALEYAKRGELDIVTVCPSIVIGPMLQPTINTSSLLLLGF----LKG  214 (248)
Q Consensus       143 ~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~l----~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~----~~~  214 (248)
                                        .|+.||++.+.+    +.+++++ +|+||+|+||++.+++...... ........    ..+
T Consensus       181 ------------------~Y~asKaal~~l~~~la~e~~~~-gIrvn~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~p~~  240 (296)
T 3k31_A          181 ------------------VMGVCKAALEASVKYLAVDLGKQ-QIRVNAISAGPVRTLASSGISD-FHYILTWNKYNSPLR  240 (296)
T ss_dssp             ------------------HHHHHHHHHHHHHHHHHHHHHTT-TEEEEEEEECCCCCSSCCSCHH-HHHHHHHHHHHSTTS
T ss_pred             ------------------hhHHHHHHHHHHHHHHHHHHhhc-CcEEEEEEECCCcCchhhcccc-hHHHHHHHHhcCCCC
Confidence                              399999755555    4445443 6999999999999998654311 11111111    111


Q ss_pred             C------------CCCCCCCchhhhhhhhhccceeEE
Q 025755          215 F------------FFTTPSHSYMLERTLVLNQGVRLY  239 (248)
Q Consensus       215 ~------------~l~~~~~~~~~g~~l~vd~g~~~~  239 (248)
                      +            |+.++.+.|+||+++.||||+.+.
T Consensus       241 r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG~~~~  277 (296)
T 3k31_A          241 RNTTLDDVGGAALYLLSDLGRGTTGETVHVDCGYHVV  277 (296)
T ss_dssp             SCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             CCCCHHHHHHHHHHHcCCccCCccCCEEEECCCcccc
Confidence            1            777888899999999999998754

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=100.00  E-value=6.1e-33  Score=227.14  Aligned_cols=213  Identities=16%  Similarity=0.101  Sum_probs=155.8

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcC-C-CCCeEEEEccCCCHHHHHHHhC----
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEG-A-SENLQLFKTDLLDYEALCAATA----   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~-~-~~~~~~~~~Di~d~~~~~~~~~----   76 (248)
                      ++++|+++||||++|||+++++.|+++|++|++++|+.+. .....+.+.. . ..++.++.+|++|.++++++++    
T Consensus         5 ~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~-~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   83 (265)
T 3lf2_A            5 DLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGER-LRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACER   83 (265)
T ss_dssp             CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHH-HHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHH
Confidence            4789999999999999999999999999999999998643 2222233322 2 2358999999999999888775    


Q ss_pred             ---CCCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHHhc----CCCEEEEEeccceeccCCCCCCCCccC
Q 025755           77 ---GCTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCVKA----KVKRVVVVSSIGAVMLNPNWPKGQVMD  145 (248)
Q Consensus        77 ---~id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~~~----~~~~iV~vSS~~~~~~~~~~~~~~~~~  145 (248)
                         ++|+||||||.......    .+.|...+++|+.++.++++++.+.    +.++||++||..+..+.+..       
T Consensus        84 ~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-------  156 (265)
T 3lf2_A           84 TLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQPEPHM-------  156 (265)
T ss_dssp             HHCSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGTSCCTTB-------
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccCCCCCCc-------
Confidence               68999999998654322    2445678999999999999888653    56899999998877665432       


Q ss_pred             CCCCCchhhhccccchHHHHHHHHHH----HHHHHHHhCCccEEEEccCeeecCCCCCCCC-------ccHHHHHH----
Q 025755          146 EECWSDEEFCKATENYYCLAKTIAEI----QALEYAKRGELDIVTVCPSIVIGPMLQPTIN-------TSSLLLLG----  210 (248)
Q Consensus       146 e~~~~~~~~~~~~~~~Y~~sK~~~e~----l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~-------~~~~~~~~----  210 (248)
                                    ..|+.||++.+.    ++.+++++ |+|||+|+||.+.+|+......       ....+...    
T Consensus       157 --------------~~Y~asKaa~~~l~~~la~e~~~~-gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (265)
T 3lf2_A          157 --------------VATSAARAGVKNLVRSMAFEFAPK-GVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARN  221 (265)
T ss_dssp             --------------HHHHHHHHHHHHHHHHHHHHHGGG-TEEEEEEEECSBCCHHHHHHHTC------CHHHHHHHHHHH
T ss_pred             --------------hhhHHHHHHHHHHHHHHHHHhccc-CeEEEEEEeCcCcCchhhhhhhhhhhhccCHHHHHHHHhhc
Confidence                          349999975554    55555544 5999999999999985321100       00111111    


Q ss_pred             --HHcCC------------CCCCCCCchhhhhhhhhccceeE
Q 025755          211 --FLKGF------------FFTTPSHSYMLERTLVLNQGVRL  238 (248)
Q Consensus       211 --~~~~~------------~l~~~~~~~~~g~~l~vd~g~~~  238 (248)
                        ...++            |+.++.+.|+||+++.||||++.
T Consensus       222 ~~~p~~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG~~~  263 (265)
T 3lf2_A          222 KQIPLGRLGKPIEAARAILFLASPLSAYTTGSHIDVSGGLSR  263 (265)
T ss_dssp             TTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSEEEEESSSCCC
T ss_pred             cCCCcCCCcCHHHHHHHHHHHhCchhcCcCCCEEEECCCCcC
Confidence              11111            77888889999999999999863

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=100.00  E-value=4.6e-33  Score=233.42  Aligned_cols=191  Identities=38%  Similarity=0.680  Sum_probs=142.6

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEc-CCCch-hhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEE
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVR-DPCDE-KNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFH   83 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r-~~~~~-~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~   83 (248)
                      +|+||||||+||||++++++|+++|++|+++.| +.... ....+..+.....++.++.+|++|.+++.++++++|+|||
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih   80 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNADLSNPDSFAAAIEGCVGIFH   80 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCCHHHHTSTTHHHHEEECCCCTTCGGGGHHHHTTCSEEEE
T ss_pred             CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHHHHHhhhccCCceEEEecCCCCHHHHHHHHcCCCEEEE
Confidence            589999999999999999999999999999988 54211 1111111111113578889999999999999999999999


Q ss_pred             ccccCCCCCCCCccccchhhhHHHHHHHHHHHHhc-CCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhh--ccccc
Q 025755           84 VACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKA-KVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFC--KATEN  160 (248)
Q Consensus        84 ~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~-~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~--~~~~~  160 (248)
                      +|+.... ...+++..++++|+.|+.++++++.+. +.++|||+||..++++.+..  ..+++|+++...+..  ..|..
T Consensus        81 ~A~~~~~-~~~~~~~~~~~~nv~gt~~l~~aa~~~~~~~~iV~~SS~~~~~~~~~~--~~~~~e~~~~~~~~~~~~~p~~  157 (322)
T 2p4h_X           81 TASPIDF-AVSEPEEIVTKRTVDGALGILKACVNSKTVKRFIYTSSGSAVSFNGKD--KDVLDESDWSDVDLLRSVKPFG  157 (322)
T ss_dssp             CCCCC---------CHHHHHHHHHHHHHHHHHTTCSSCCEEEEEEEGGGTSCSSSC--CSEECTTCCCCHHHHHHHCCTT
T ss_pred             cCCcccC-CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccHHHcccCCCC--CeecCCccccchhhhcccCccc
Confidence            9975421 112223458999999999999999988 78999999998766654321  346777766544321  12222


Q ss_pred             -hHHHHHHHHHHHHHHHHHhCCccEEEEccCeeecCCCCC
Q 025755          161 -YYCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQP  199 (248)
Q Consensus       161 -~Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~  199 (248)
                       +|+.||.++|.++.+++++++++++++||+++|||+...
T Consensus       158 ~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrp~~v~g~~~~~  197 (322)
T 2p4h_X          158 WNYAVSKTLAEKAVLEFGEQNGIDVVTLILPFIVGRFVCP  197 (322)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTCCEEEEEECEEESCCCSS
T ss_pred             ccHHHHHHHHHHHHHHHHHhcCCcEEEEcCCceECCCCCC
Confidence             599999999999999988778999999999999998653

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=100.00  E-value=1.1e-33  Score=231.11  Aligned_cols=216  Identities=11%  Similarity=0.072  Sum_probs=155.4

Q ss_pred             CCCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCc--hhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC---
Q 025755            2 SGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCD--EKNAHLKKLEGASENLQLFKTDLLDYEALCAATA---   76 (248)
Q Consensus         2 ~~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~---   76 (248)
                      +++++|+++||||++|||+++++.|+++|++|++++|+..+  ......+.+.....++.++.+|++|.++++++++   
T Consensus         7 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   86 (262)
T 3ksu_A            7 HDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAE   86 (262)
T ss_dssp             SCCTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHH
Confidence            45789999999999999999999999999999999886432  2223334444446689999999999999998876   


Q ss_pred             ----CCCEEEEccccCCCCC----CCCccccchhhhHHHHHHHHHHHHhc--CCCEEEEEeccceeccCCCCCCCCccCC
Q 025755           77 ----GCTGVFHVACPVPVGK----VPNPEVQLIDPAVVGTKNVLNSCVKA--KVKRVVVVSSIGAVMLNPNWPKGQVMDE  146 (248)
Q Consensus        77 ----~id~vi~~ag~~~~~~----~~~~~~~~~~~n~~g~~~~~~~~~~~--~~~~iV~vSS~~~~~~~~~~~~~~~~~e  146 (248)
                          ++|+||||||......    ..+.|...+++|+.++.++++++.+.  +.++||++||..+..+.+....      
T Consensus        87 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~------  160 (262)
T 3ksu_A           87 KEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATSLLAAYTGFYST------  160 (262)
T ss_dssp             HHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCCHHHHHHCCCCC------
T ss_pred             HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEechhhccCCCCCch------
Confidence                6899999999765432    12445678999999999999999886  5579999999887776655444      


Q ss_pred             CCCCchhhhccccchHHHHHHHHHHHHHHHHHhC---CccEEEEccCeeecCCCCCCC--CccHHHHHHHHcCC------
Q 025755          147 ECWSDEEFCKATENYYCLAKTIAEIQALEYAKRG---ELDIVTVCPSIVIGPMLQPTI--NTSSLLLLGFLKGF------  215 (248)
Q Consensus       147 ~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~---~i~v~~vrpg~i~g~~~~~~~--~~~~~~~~~~~~~~------  215 (248)
                                     |+.||++.+.+.+.++.+.   +++||+|+||.+.+++.....  .....+......++      
T Consensus       161 ---------------Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~r~~~ped  225 (262)
T 3ksu_A          161 ---------------YAGNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTSFFYGQETKESTAFHKSQAMGNQLTKIED  225 (262)
T ss_dssp             --------------------CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTHHHHTCC------------CCCCSCCGGG
T ss_pred             ---------------hHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccCchHHHHHHHhcCcccCCCCHHH
Confidence                           9999976666666665543   699999999999998643210  01111111111111      


Q ss_pred             ------CCCCCCCchhhhhhhhhccceeEE
Q 025755          216 ------FFTTPSHSYMLERTLVLNQGVRLY  239 (248)
Q Consensus       216 ------~l~~~~~~~~~g~~l~vd~g~~~~  239 (248)
                            ++.++ ..|+||+++.||||+...
T Consensus       226 vA~~v~~L~s~-~~~itG~~i~vdGg~~~~  254 (262)
T 3ksu_A          226 IAPIIKFLTTD-GWWINGQTIFANGGYTTR  254 (262)
T ss_dssp             THHHHHHHHTT-TTTCCSCEEEESTTCCCC
T ss_pred             HHHHHHHHcCC-CCCccCCEEEECCCccCC
Confidence                  66777 889999999999998643

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=2.4e-33  Score=235.23  Aligned_cols=214  Identities=14%  Similarity=0.101  Sum_probs=156.6

Q ss_pred             CCCCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCc-----------hhhHHhhhhcCCCCCeEEEEccCCCHH
Q 025755            1 MSGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCD-----------EKNAHLKKLEGASENLQLFKTDLLDYE   69 (248)
Q Consensus         1 m~~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~-----------~~~~~~~~~~~~~~~~~~~~~Di~d~~   69 (248)
                      |.++++|++|||||+||||+++++.|+++|++|++++|+...           ......+.+.....++.++.+|++|.+
T Consensus        41 m~~l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~  120 (317)
T 3oec_A           41 MNRLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLA  120 (317)
T ss_dssp             -CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHH
T ss_pred             hhccCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHH
Confidence            456889999999999999999999999999999999886321           112222233334568999999999999


Q ss_pred             HHHHHhC-------CCCEEEEccccCCCCC----CCCccccchhhhHHHHHHHHHHHHhc----C-CCEEEEEeccceec
Q 025755           70 ALCAATA-------GCTGVFHVACPVPVGK----VPNPEVQLIDPAVVGTKNVLNSCVKA----K-VKRVVVVSSIGAVM  133 (248)
Q Consensus        70 ~~~~~~~-------~id~vi~~ag~~~~~~----~~~~~~~~~~~n~~g~~~~~~~~~~~----~-~~~iV~vSS~~~~~  133 (248)
                      +++++++       ++|+||||||......    ..+.|...+++|+.++.++++++.+.    + .++||++||..++.
T Consensus       121 ~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~~~  200 (317)
T 3oec_A          121 SLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLR  200 (317)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGGSS
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHhcC
Confidence            9888876       6899999999865432    12445678999999999988887543    3 57899999988776


Q ss_pred             cCCCCCCCCccCCCCCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCC----------
Q 025755          134 LNPNWPKGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPT----------  200 (248)
Q Consensus       134 ~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~----------  200 (248)
                      +.+..                     ..|+.||++.+.+.+.++.+   .||+||+|+||++++|+....          
T Consensus       201 ~~~~~---------------------~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~  259 (317)
T 3oec_A          201 GAPGQ---------------------SHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALNEKLLKMFLPHL  259 (317)
T ss_dssp             CCTTB---------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHCHHHHHHHCTTC
T ss_pred             CCCCC---------------------cchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCccccchhhhhhhhhhc
Confidence            65432                     33999997555555555443   259999999999999863210          


Q ss_pred             CCc--------------------cHHHHHHHHcCCCCCCCCCchhhhhhhhhcccee
Q 025755          201 INT--------------------SSLLLLGFLKGFFFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       201 ~~~--------------------~~~~~~~~~~~~~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                      ...                    .+.-+.....  ||.++.+.|+||++|.||||+.
T Consensus       260 ~~~~~~~~~~~~~~~~~~p~~~~~pedvA~av~--fL~s~~a~~itG~~i~vdGG~~  314 (317)
T 3oec_A          260 ENPTREDAAELFSQLTLLPIPWVEPEDVSNAVA--WLASDEARYIHGAAIPVDGGQL  314 (317)
T ss_dssp             SSCCHHHHHHHHTTTCSSSSSSBCHHHHHHHHH--HHTSGGGTTCCSCEEEESTTGG
T ss_pred             cccchhHHHHHHhhhccCCCCCCCHHHHHHHHH--HHcCCcccCCCCCEEEECcchh
Confidence            000                    0111111111  7788888999999999999975

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=100.00  E-value=2.8e-33  Score=228.52  Aligned_cols=205  Identities=14%  Similarity=0.094  Sum_probs=153.8

Q ss_pred             CCCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-----
Q 025755            2 SGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-----   76 (248)
Q Consensus         2 ~~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-----   76 (248)
                      +++++|++|||||+||||+++++.|+++|++|++++|+....          ...++.++.+|++|.++++++++     
T Consensus        24 ~~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~----------~~~~~~~~~~Dv~d~~~v~~~~~~~~~~   93 (260)
T 3un1_A           24 MRNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPS----------ADPDIHTVAGDISKPETADRIVREGIER   93 (260)
T ss_dssp             HHTTCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCC----------SSTTEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred             hCcCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhc----------ccCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            347889999999999999999999999999999999986421          12368999999999999988876     


Q ss_pred             --CCCEEEEccccCCCCC----CCCccccchhhhHHHHHHHHHHH----HhcCCCEEEEEeccceeccCCCCCCCCccCC
Q 025755           77 --GCTGVFHVACPVPVGK----VPNPEVQLIDPAVVGTKNVLNSC----VKAKVKRVVVVSSIGAVMLNPNWPKGQVMDE  146 (248)
Q Consensus        77 --~id~vi~~ag~~~~~~----~~~~~~~~~~~n~~g~~~~~~~~----~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e  146 (248)
                        ++|+||||||......    ..+.++..+++|+.|+.++++++    ++.+.++||++||..+..+.+..        
T Consensus        94 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~--------  165 (260)
T 3un1_A           94 FGRIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVDQPMVGM--------  165 (260)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCTTTTSCBTTC--------
T ss_pred             CCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechhhccCCCCC--------
Confidence              7999999999865432    12445678999999999998887    45567899999997654322211        


Q ss_pred             CCCCchhhhccccchHHHHHHHHHHHHHHHHHhC---CccEEEEccCeeecCCCCCCCC------------ccHHHHHHH
Q 025755          147 ECWSDEEFCKATENYYCLAKTIAEIQALEYAKRG---ELDIVTVCPSIVIGPMLQPTIN------------TSSLLLLGF  211 (248)
Q Consensus       147 ~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~---~i~v~~vrpg~i~g~~~~~~~~------------~~~~~~~~~  211 (248)
                                 +...|+.||++.+.+.+.++.++   |++||+|+||.++||+......            ..+.-+...
T Consensus       166 -----------~~~~Y~~sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~p~~r~~~~~dva~a  234 (260)
T 3un1_A          166 -----------PSALASLTKGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHPAETHSTLAGLHPVGRMGEIRDVVDA  234 (260)
T ss_dssp             -----------CCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTSCGGGHHHHHTTSTTSSCBCHHHHHHH
T ss_pred             -----------ccHHHHHHHHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCCCHHHHHHHhccCCCCCCcCHHHHHHH
Confidence                       12449999987777777777665   7999999999999998653200            000111111


Q ss_pred             HcCCCCCCCCCchhhhhhhhhccceeEE
Q 025755          212 LKGFFFTTPSHSYMLERTLVLNQGVRLY  239 (248)
Q Consensus       212 ~~~~~l~~~~~~~~~g~~l~vd~g~~~~  239 (248)
                      ..  ++  +.+.|++|+++.||||+.+.
T Consensus       235 v~--~L--~~~~~itG~~i~vdGG~~~~  258 (260)
T 3un1_A          235 VL--YL--EHAGFITGEILHVDGGQNAG  258 (260)
T ss_dssp             HH--HH--HHCTTCCSCEEEESTTGGGC
T ss_pred             HH--Hh--cccCCCCCcEEEECCCeecc
Confidence            10  33  55789999999999998653

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=100.00  E-value=3e-33  Score=230.31  Aligned_cols=211  Identities=18%  Similarity=0.127  Sum_probs=155.0

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC------
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA------   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~------   76 (248)
                      ++++|+++||||+||||+++++.|+++|++|++++|+... .....+.+   ..++.++.+|++|.++++++++      
T Consensus        26 ~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~-~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  101 (277)
T 3gvc_A           26 DLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDA-ADAAATKI---GCGAAACRVDVSDEQQIIAMVDACVAAF  101 (277)
T ss_dssp             -CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHH-HHHHHHHH---CSSCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHHc---CCcceEEEecCCCHHHHHHHHHHHHHHc
Confidence            4788999999999999999999999999999999998642 22222222   4578899999999999888775      


Q ss_pred             -CCCEEEEccccCCCCC----CCCccccchhhhHHHHHHHHHHHHh----cCCCEEEEEeccceeccCCCCCCCCccCCC
Q 025755           77 -GCTGVFHVACPVPVGK----VPNPEVQLIDPAVVGTKNVLNSCVK----AKVKRVVVVSSIGAVMLNPNWPKGQVMDEE  147 (248)
Q Consensus        77 -~id~vi~~ag~~~~~~----~~~~~~~~~~~n~~g~~~~~~~~~~----~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~  147 (248)
                       ++|+||||||......    ..+.++..+++|+.++.++++++.+    .+.++||++||..+..+.+..         
T Consensus       102 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~---------  172 (277)
T 3gvc_A          102 GGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAVGGT---------  172 (277)
T ss_dssp             SSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTB---------
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCc---------
Confidence             6899999999865432    1244567899999999888888755    466899999998876655432         


Q ss_pred             CCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCC--------CccHHHHHHHHcCC-
Q 025755          148 CWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTI--------NTSSLLLLGFLKGF-  215 (248)
Q Consensus       148 ~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~--------~~~~~~~~~~~~~~-  215 (248)
                                  ..|+.||++.+.+.+.++.+   .|++||+|+||.+++|+.....        ............++ 
T Consensus       173 ------------~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  240 (277)
T 3gvc_A          173 ------------GAYGMSKAGIIQLSRITAAELRSSGIRSNTLLPAFVDTPMQQTAMAMFDGALGAGGARSMIARLQGRM  240 (277)
T ss_dssp             ------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTCC------CCHHHHHHHHHSSC
T ss_pred             ------------hhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCccCchHHHhhhcchhhHHHHhhhhhhhccccCC
Confidence                        34999997555555544432   3599999999999998632110        00001000111121 


Q ss_pred             -----------CCCCCCCchhhhhhhhhccceeE
Q 025755          216 -----------FFTTPSHSYMLERTLVLNQGVRL  238 (248)
Q Consensus       216 -----------~l~~~~~~~~~g~~l~vd~g~~~  238 (248)
                                 ++.++.+.|+||+++.||||..+
T Consensus       241 ~~pedvA~~v~~L~s~~a~~itG~~i~vdGG~~~  274 (277)
T 3gvc_A          241 AAPEEMAGIVVFLLSDDASMITGTTQIADGGTIA  274 (277)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             CCHHHHHHHHHHHcCCccCCccCcEEEECCcchh
Confidence                       77788889999999999999764

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=100.00  E-value=2.3e-33  Score=230.36  Aligned_cols=212  Identities=20%  Similarity=0.139  Sum_probs=157.9

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC------
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA------   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~------   76 (248)
                      ++++|+++||||+||||++++++|+++|++|++++|+..+......+.+.....++.++.+|++|.++++++++      
T Consensus        26 ~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~  105 (271)
T 4iin_A           26 QFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQSD  105 (271)
T ss_dssp             CCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhc
Confidence            47889999999999999999999999999999999976443333334444445689999999999999888876      


Q ss_pred             -CCCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHHh----cCCCEEEEEeccceeccCCCCCCCCccCCC
Q 025755           77 -GCTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCVK----AKVKRVVVVSSIGAVMLNPNWPKGQVMDEE  147 (248)
Q Consensus        77 -~id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~~----~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~  147 (248)
                       ++|+||||||.......    .+.+...+++|+.++.++++++.+    .+.++||++||..+..+.+..         
T Consensus       106 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~---------  176 (271)
T 4iin_A          106 GGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGERGNMGQ---------  176 (271)
T ss_dssp             SSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTC---------
T ss_pred             CCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhhcCCCCCc---------
Confidence             68999999998765321    244567899999999888877754    366899999998877665432         


Q ss_pred             CCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCCCc---------------cHHHHH
Q 025755          148 CWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTINT---------------SSLLLL  209 (248)
Q Consensus       148 ~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~~~---------------~~~~~~  209 (248)
                                  ..|+.||++.+.+++.++.+   .++++++|+||.+.+++.......               .+..+.
T Consensus       177 ------------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~dvA  244 (271)
T 4iin_A          177 ------------TNYSASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNANLKDELKADYVKNIPLNRLGSAKEVA  244 (271)
T ss_dssp             ------------HHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC------------CGGGCTTCSCBCHHHHH
T ss_pred             ------------hHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchhhhcHHHHHHHHhcCCcCCCcCHHHHH
Confidence                        33999998776666666554   369999999999999875432110               111111


Q ss_pred             HHHcCCCCCCCCCchhhhhhhhhcccee
Q 025755          210 GFLKGFFFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       210 ~~~~~~~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                      +...  ++.++...+++|+++.+|||+.
T Consensus       245 ~~i~--~l~s~~~~~itG~~i~vdGG~~  270 (271)
T 4iin_A          245 EAVA--FLLSDHSSYITGETLKVNGGLY  270 (271)
T ss_dssp             HHHH--HHHSGGGTTCCSCEEEESTTSC
T ss_pred             HHHH--HHhCCCcCCCcCCEEEeCCCee
Confidence            1111  6667778899999999999975

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=100.00  E-value=4.4e-33  Score=234.91  Aligned_cols=224  Identities=21%  Similarity=0.235  Sum_probs=164.0

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCC--CeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEE
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKG--YMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVF   82 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi   82 (248)
                      ++|+||||||+||||++++++|+++|  ++|++++|+........++.+. ...++.++.+|++|.+++.+++.++|+||
T Consensus         2 ~~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi   80 (336)
T 2hun_A            2 HSMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKDLE-DDPRYTFVKGDVADYELVKELVRKVDGVV   80 (336)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGGTTTT-TCTTEEEEECCTTCHHHHHHHHHTCSEEE
T ss_pred             CCCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHHhhhc-cCCceEEEEcCCCCHHHHHHHhhCCCEEE
Confidence            35689999999999999999999986  8999999875211112222221 13578999999999999999999999999


Q ss_pred             EccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCC-CEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccccch
Q 025755           83 HVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKV-KRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENY  161 (248)
Q Consensus        83 ~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~-~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~  161 (248)
                      ||||..........+..++++|+.++.++++++.+.+. ++|||+||.. +|+...   ..+++|+++..+      .+.
T Consensus        81 h~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~-vyg~~~---~~~~~E~~~~~~------~~~  150 (336)
T 2hun_A           81 HLAAESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVSTDE-VYGDIL---KGSFTENDRLMP------SSP  150 (336)
T ss_dssp             ECCCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEEGG-GGCCCS---SSCBCTTBCCCC------CSH
T ss_pred             ECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEeccHH-HHCCCC---CCCcCCCCCCCC------CCc
Confidence            99997542211234467899999999999999998864 7999999975 444422   356777765543      456


Q ss_pred             HHHHHHHHHHHHHHHHHhCCccEEEEccCeeecCCCCCCCCccHHHHHHHHcCCCCCCCCCchhhhhhhhhccceeEEE
Q 025755          162 YCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKGFFFTTPSHSYMLERTLVLNQGVRLYR  240 (248)
Q Consensus       162 Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~l~vd~g~~~~~  240 (248)
                      |+.||..+|.+++.++.+++++++++||+.+|||...+. .....++..+..+..+....++....+.+++++...++.
T Consensus       151 Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~  228 (336)
T 2hun_A          151 YSATKAASDMLVLGWTRTYNLNASITRCTNNYGPYQFPE-KLIPKTIIRASLGLKIPIYGTGKNVRDWLYVEDHVRAIE  228 (336)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCEEEEEEECEEESTTCCTT-SHHHHHHHHHHTTCCEEEETC---CEEEEEHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHhCCCEEEEeeeeeeCcCCCcC-chHHHHHHHHHcCCCceEeCCCCceeeeEEHHHHHHHHH
Confidence            999999999999999988889999999999999986532 344566667776654433233333345566666554443

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=100.00  E-value=5.1e-33  Score=225.16  Aligned_cols=212  Identities=17%  Similarity=0.160  Sum_probs=152.8

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-------
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-------   76 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-------   76 (248)
                      |++|+++||||+||||+++++.|+++|++|++++|+..+......+.+.....++.++.+|++|.++++++++       
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   81 (246)
T 2uvd_A            2 LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVFG   81 (246)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            6789999999999999999999999999999999843222223333333334678999999999999988876       


Q ss_pred             CCCEEEEccccCCCCC----CCCccccchhhhHHHHHHHHHHHH----hcCCCEEEEEeccceeccCCCCCCCCccCCCC
Q 025755           77 GCTGVFHVACPVPVGK----VPNPEVQLIDPAVVGTKNVLNSCV----KAKVKRVVVVSSIGAVMLNPNWPKGQVMDEEC  148 (248)
Q Consensus        77 ~id~vi~~ag~~~~~~----~~~~~~~~~~~n~~g~~~~~~~~~----~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~  148 (248)
                      ++|+||||||......    ..+.|+..+++|+.++.++++++.    +.+.++||++||..+..+.+.           
T Consensus        82 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-----------  150 (246)
T 2uvd_A           82 QVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVTGNPG-----------  150 (246)
T ss_dssp             CCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTT-----------
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCHHhcCCCCC-----------
Confidence            6999999999765321    123456789999999777766654    446789999999877665543           


Q ss_pred             CCchhhhccccchHHHHHHHHH----HHHHHHHHhCCccEEEEccCeeecCCCCCCCCcc-HHHHHHHHcCC--------
Q 025755          149 WSDEEFCKATENYYCLAKTIAE----IQALEYAKRGELDIVTVCPSIVIGPMLQPTINTS-SLLLLGFLKGF--------  215 (248)
Q Consensus       149 ~~~~~~~~~~~~~Y~~sK~~~e----~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~~~-~~~~~~~~~~~--------  215 (248)
                                ...|+.||+..+    .++.+++++ ++++++|+||.+.+++........ ..+......++        
T Consensus       151 ----------~~~Y~asK~a~~~~~~~la~e~~~~-gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA  219 (246)
T 2uvd_A          151 ----------QANYVAAKAGVIGLTKTSAKELASR-NITVNAIAPGFIATDMTDVLDENIKAEMLKLIPAAQFGEAQDIA  219 (246)
T ss_dssp             ----------BHHHHHHHHHHHHHHHHHHHHHGGG-TEEEEEEEECSBGGGCSSCCCTTHHHHHHHTCTTCSCBCHHHHH
T ss_pred             ----------CchHHHHHHHHHHHHHHHHHHhhhc-CeEEEEEEeccccCcchhhcCHHHHHHHHhcCCCCCCcCHHHHH
Confidence                      233999997544    445555544 599999999999998754321111 11111111111        


Q ss_pred             ----CCCCCCCchhhhhhhhhcccee
Q 025755          216 ----FFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       216 ----~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                          ++.++...|++|+++.+|||+.
T Consensus       220 ~~~~~l~s~~~~~~tG~~~~vdgG~~  245 (246)
T 2uvd_A          220 NAVTFFASDQSKYITGQTLNVDGGMV  245 (246)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTSC
T ss_pred             HHHHHHcCchhcCCCCCEEEECcCcc
Confidence                5566667899999999999964

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=100.00  E-value=3.6e-33  Score=231.64  Aligned_cols=214  Identities=12%  Similarity=0.036  Sum_probs=154.9

Q ss_pred             CCCCCcEEEEEcCccH--HHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC---
Q 025755            2 SGEDKERVCVTGAGGY--IASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA---   76 (248)
Q Consensus         2 ~~l~~k~vlVtG~~g~--iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~---   76 (248)
                      ..+++|+++||||+|+  ||+++++.|+++|++|++++|+..  .....+.+....+++.++.+|++|.++++++++   
T Consensus        27 ~~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~  104 (293)
T 3grk_A           27 GLLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDA--LKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLE  104 (293)
T ss_dssp             CTTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHH--HHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHH--HHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHH
Confidence            3578999999999965  999999999999999999998842  222223222223568899999999999988876   


Q ss_pred             ----CCCEEEEccccCCC----C----CCCCccccchhhhHHHHHHHHHHHHhc--CCCEEEEEeccceeccCCCCCCCC
Q 025755           77 ----GCTGVFHVACPVPV----G----KVPNPEVQLIDPAVVGTKNVLNSCVKA--KVKRVVVVSSIGAVMLNPNWPKGQ  142 (248)
Q Consensus        77 ----~id~vi~~ag~~~~----~----~~~~~~~~~~~~n~~g~~~~~~~~~~~--~~~~iV~vSS~~~~~~~~~~~~~~  142 (248)
                          ++|+||||||....    .    ...+.|...+++|+.++.++++++.+.  +.++||++||..+..+.+...   
T Consensus       105 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~~~~---  181 (293)
T 3grk_A          105 KKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGAEKVMPNYN---  181 (293)
T ss_dssp             HHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGGTSBCTTTT---
T ss_pred             HhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhhccCCCchH---
Confidence                68999999998641    1    123455678999999999999999875  357999999988776655433   


Q ss_pred             ccCCCCCCchhhhccccchHHHHHHHHHHHH----HHHHHhCCccEEEEccCeeecCCCCCCCCccHHHHHH----HHcC
Q 025755          143 VMDEECWSDEEFCKATENYYCLAKTIAEIQA----LEYAKRGELDIVTVCPSIVIGPMLQPTINTSSLLLLG----FLKG  214 (248)
Q Consensus       143 ~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~l~----~~~~~~~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~----~~~~  214 (248)
                                        .|+.||++.+.+.    .+++++ ||+||+|+||.+.+++...... .......    ...+
T Consensus       182 ------------------~Y~asKaa~~~l~~~la~e~~~~-gI~vn~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~p~~  241 (293)
T 3grk_A          182 ------------------VMGVAKAALEASVKYLAVDLGPQ-NIRVNAISAGPIKTLAASGIGD-FRYILKWNEYNAPLR  241 (293)
T ss_dssp             ------------------HHHHHHHHHHHHHHHHHHHHGGG-TEEEEEEEECCCCC------CC-HHHHHHHHHHHSTTS
T ss_pred             ------------------HHHHHHHHHHHHHHHHHHHHhHh-CCEEEEEecCCCcchhhhcccc-hHHHHHHHHhcCCCC
Confidence                              3999997555554    444444 5999999999999987654311 1111111    1111


Q ss_pred             C------------CCCCCCCchhhhhhhhhccceeEEE
Q 025755          215 F------------FFTTPSHSYMLERTLVLNQGVRLYR  240 (248)
Q Consensus       215 ~------------~l~~~~~~~~~g~~l~vd~g~~~~~  240 (248)
                      +            ++.++.+.|+||+++.||||+.+..
T Consensus       242 r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~~~  279 (293)
T 3grk_A          242 RTVTIDEVGDVGLYFLSDLSRSVTGEVHHADSGYHVIG  279 (293)
T ss_dssp             SCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGBC
T ss_pred             CCCCHHHHHHHHHHHcCccccCCcceEEEECCCcccCC
Confidence            1            7778888999999999999987543

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=100.00  E-value=6.2e-34  Score=234.22  Aligned_cols=212  Identities=18%  Similarity=0.114  Sum_probs=156.6

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC------
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA------   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~------   76 (248)
                      ++++|+++||||+||||+++++.|+++|++|++++|+.... ....+.+.....++.++.+|++|.++++++++      
T Consensus        30 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~g  108 (275)
T 4imr_A           30 GLRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGST-AAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAIA  108 (275)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTT-HHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHH-HHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHhC
Confidence            47899999999999999999999999999999999987533 33333444446789999999999998888776      


Q ss_pred             CCCEEEEccccCCCCC----CCCccccchhhhHHHHHHHHHHHHh----cCCCEEEEEeccceeccCCCCCCCCccCCCC
Q 025755           77 GCTGVFHVACPVPVGK----VPNPEVQLIDPAVVGTKNVLNSCVK----AKVKRVVVVSSIGAVMLNPNWPKGQVMDEEC  148 (248)
Q Consensus        77 ~id~vi~~ag~~~~~~----~~~~~~~~~~~n~~g~~~~~~~~~~----~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~  148 (248)
                      ++|++|||||......    ..+.|+..+++|+.|+.++++++.+    .+.++||++||..+..+.+.           
T Consensus       109 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~-----------  177 (275)
T 4imr_A          109 PVDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQLRPKSV-----------  177 (275)
T ss_dssp             CCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT-----------
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCCC-----------
Confidence            6899999999765432    1344567899999999998888754    46689999999876654322           


Q ss_pred             CCchhhhccccchHHHHHHHHHHHHHHHHHhC---CccEEEEccCeeecCCCCCCC----CccHHHHHHH-HcCC-----
Q 025755          149 WSDEEFCKATENYYCLAKTIAEIQALEYAKRG---ELDIVTVCPSIVIGPMLQPTI----NTSSLLLLGF-LKGF-----  215 (248)
Q Consensus       149 ~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~---~i~v~~vrpg~i~g~~~~~~~----~~~~~~~~~~-~~~~-----  215 (248)
                                ...|+.||++.+.+.+.++.++   +++||+|+||.+.+++.....    .....+.... ..++     
T Consensus       178 ----------~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pe  247 (275)
T 4imr_A          178 ----------VTAYAATKAAQHNLIQSQARDFAGDNVLLNTLAPGLVDTDRNADRRAQDPEGWDEYVRTLNWMGRAGRPE  247 (275)
T ss_dssp             ----------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHHHHHCHHHHHHHHHHHSTTCSCBCGG
T ss_pred             ----------chhhHHHHHHHHHHHHHHHHHhcccCcEEEEEEeccccCcccccccccChHHHHHHHhhcCccCCCcCHH
Confidence                      2349999975555555444432   599999999999998643210    0111112222 1121     


Q ss_pred             -------CCCCCCCchhhhhhhhhccce
Q 025755          216 -------FFTTPSHSYMLERTLVLNQGV  236 (248)
Q Consensus       216 -------~l~~~~~~~~~g~~l~vd~g~  236 (248)
                             |+.++.+.|+||+++.||||+
T Consensus       248 dvA~~v~fL~s~~a~~itG~~i~vdGG~  275 (275)
T 4imr_A          248 EMVGAALFLASEACSFMTGETIFLTGGY  275 (275)
T ss_dssp             GGHHHHHHHHSGGGTTCCSCEEEESSCC
T ss_pred             HHHHHHHHHcCcccCCCCCCEEEeCCCC
Confidence                   677888899999999999995

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=100.00  E-value=7.7e-33  Score=227.49  Aligned_cols=213  Identities=16%  Similarity=0.154  Sum_probs=151.8

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHh--------
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAAT--------   75 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~--------   75 (248)
                      +++|+++||||+||||++++++|+++|++|++++|+... .....+.+.....++.++.+|++|.+++++++        
T Consensus        19 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   97 (273)
T 1ae1_A           19 LKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKE-LDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFD   97 (273)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHH-HHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTT
T ss_pred             CCCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            678999999999999999999999999999999998642 22223333333467899999999999988877        


Q ss_pred             CCCCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHHh----cCCCEEEEEeccceeccCCCCCCCCccCCC
Q 025755           76 AGCTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCVK----AKVKRVVVVSSIGAVMLNPNWPKGQVMDEE  147 (248)
Q Consensus        76 ~~id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~~----~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~  147 (248)
                      .++|+||||||.......    .+.+...+++|+.++.++++++.+    .+.++||++||..++.+.+.          
T Consensus        98 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~----------  167 (273)
T 1ae1_A           98 GKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPS----------  167 (273)
T ss_dssp             SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCTT----------
T ss_pred             CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHhhcCCCCC----------
Confidence            579999999998654321    234567889999999999888753    46689999999876655432          


Q ss_pred             CCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCCC---ccHHHHHHH----HcCC--
Q 025755          148 CWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTIN---TSSLLLLGF----LKGF--  215 (248)
Q Consensus       148 ~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~~---~~~~~~~~~----~~~~--  215 (248)
                                 ...|+.||++.+.+.+.++.+   .+++|++|+||.++||+......   ........+    ..++  
T Consensus       168 -----------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~  236 (273)
T 1ae1_A          168 -----------VSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAG  236 (273)
T ss_dssp             -----------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHSTTCSCB
T ss_pred             -----------cchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCchhhhhhhcccCcHHHHHHHHhcCCCCCCc
Confidence                       234999998666665555443   26999999999999997543211   011111111    1111  


Q ss_pred             ----------CCCCCCCchhhhhhhhhccceeE
Q 025755          216 ----------FFTTPSHSYMLERTLVLNQGVRL  238 (248)
Q Consensus       216 ----------~l~~~~~~~~~g~~l~vd~g~~~  238 (248)
                                ++.++...|++|+++.||||..+
T Consensus       237 ~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~~  269 (273)
T 1ae1_A          237 KPQEVSALIAFLCFPAASYITGQIIWADGGFTA  269 (273)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             CHHHHHHHHHHHhCccccCcCCCEEEECCCccc
Confidence                      66677778999999999999753

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=100.00  E-value=2.1e-33  Score=231.33  Aligned_cols=216  Identities=19%  Similarity=0.156  Sum_probs=157.6

Q ss_pred             CCCCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC----
Q 025755            1 MSGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA----   76 (248)
Q Consensus         1 m~~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~----   76 (248)
                      |+++++|+++||||+||||+++++.|+++|++|++++|+... .....+.+.....++.++.+|++|.++++++++    
T Consensus        17 m~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   95 (277)
T 2rhc_B           17 MATQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEG-LRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVE   95 (277)
T ss_dssp             TCCTTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHH-HHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHH
Confidence            445788999999999999999999999999999999998642 222233333334578999999999999888876    


Q ss_pred             ---CCCEEEEccccCCCCC----CCCccccchhhhHHHHHHHHHHHHhc------CCCEEEEEeccceeccCCCCCCCCc
Q 025755           77 ---GCTGVFHVACPVPVGK----VPNPEVQLIDPAVVGTKNVLNSCVKA------KVKRVVVVSSIGAVMLNPNWPKGQV  143 (248)
Q Consensus        77 ---~id~vi~~ag~~~~~~----~~~~~~~~~~~n~~g~~~~~~~~~~~------~~~~iV~vSS~~~~~~~~~~~~~~~  143 (248)
                         ++|+||||||......    ..+.|...+++|+.++.++++++.+.      +.++||++||..+..+.+..     
T Consensus        96 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~-----  170 (277)
T 2rhc_B           96 RYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHA-----  170 (277)
T ss_dssp             HTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGTSCCTTC-----
T ss_pred             HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECccccccCCCCC-----
Confidence               6899999999765331    12345678999999999999997664      56899999998776654332     


Q ss_pred             cCCCCCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCCC---c-----cHHHHHHH-
Q 025755          144 MDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTIN---T-----SSLLLLGF-  211 (248)
Q Consensus       144 ~~e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~~---~-----~~~~~~~~-  211 (248)
                                      ..|+.||+..+.+.+.++.+   .+++|++|+||.+++++......   .     .......+ 
T Consensus       171 ----------------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (277)
T 2rhc_B          171 ----------------APYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRIT  234 (277)
T ss_dssp             ----------------HHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHHHHHHHHHHHHHHTCCHHHHHHHHH
T ss_pred             ----------------ccHHHHHHHHHHHHHHHHHHHHHhCcEEEEEecCcCcCchhhhhhhhcccccccchHHHHHHHH
Confidence                            33999998766666665543   36999999999999986421100   0     01111111 


Q ss_pred             ---HcCC------------CCCCCCCchhhhhhhhhccceeE
Q 025755          212 ---LKGF------------FFTTPSHSYMLERTLVLNQGVRL  238 (248)
Q Consensus       212 ---~~~~------------~l~~~~~~~~~g~~l~vd~g~~~  238 (248)
                         ..++            ++..+...|++|+++.+|||+..
T Consensus       235 ~~~p~~r~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdGG~~~  276 (277)
T 2rhc_B          235 ARVPIGRYVQPSEVAEMVAYLIGPGAAAVTAQALNVCGGLGN  276 (277)
T ss_dssp             HHSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTCCC
T ss_pred             hcCCCCCCcCHHHHHHHHHHHhCchhcCCCCcEEEECCCccc
Confidence               1111            56666678999999999999754

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=100.00  E-value=4.6e-32  Score=222.15  Aligned_cols=173  Identities=20%  Similarity=0.224  Sum_probs=147.9

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEE
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFH   83 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~   83 (248)
                      |+||+|+||||+||||++++++|+++|++|++++|+.....          ..++.++.+|++|.+++.++++++|+|||
T Consensus         1 m~~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~----------~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~   70 (267)
T 3rft_A            1 MAMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA----------GPNEECVQCDLADANAVNAMVAGCDGIVH   70 (267)
T ss_dssp             CCEEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC----------CTTEEEEECCTTCHHHHHHHHTTCSEEEE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc----------CCCCEEEEcCCCCHHHHHHHHcCCCEEEE
Confidence            35789999999999999999999999999999999874221          35789999999999999999999999999


Q ss_pred             ccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccccchHH
Q 025755           84 VACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYC  163 (248)
Q Consensus        84 ~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~  163 (248)
                      |||...    ..++..++++|+.|+.++++++++.+.++|||+||..++...+.   ..+++|+.+..+      .+.|+
T Consensus        71 ~Ag~~~----~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~g~~~~---~~~~~e~~~~~~------~~~Y~  137 (267)
T 3rft_A           71 LGGISV----EKPFEQILQGNIIGLYNLYEAARAHGQPRIVFASSNHTIGYYPQ---TERLGPDVPARP------DGLYG  137 (267)
T ss_dssp             CCSCCS----CCCHHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGTTSBT---TSCBCTTSCCCC------CSHHH
T ss_pred             CCCCcC----cCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcchHHhCCCCC---CCCCCCCCCCCC------CChHH
Confidence            999843    35668899999999999999999999899999999776543332   456777766544      45699


Q ss_pred             HHHHHHHHHHHHHHHhCCccEEEEccCeeecCCCCC
Q 025755          164 LAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQP  199 (248)
Q Consensus       164 ~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~  199 (248)
                      .||.+.|.+++.++.++++++++|||+.++++....
T Consensus       138 ~sK~~~e~~~~~~a~~~g~~~~~vr~~~v~~~~~~~  173 (267)
T 3rft_A          138 VSKCFGENLARMYFDKFGQETALVRIGSCTPEPNNY  173 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHCCCEEEEEECBCSSSCCST
T ss_pred             HHHHHHHHHHHHHHHHhCCeEEEEEeecccCCCCCC
Confidence            999999999999998888999999999999986544

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=100.00  E-value=8.5e-33  Score=226.30  Aligned_cols=212  Identities=16%  Similarity=0.048  Sum_probs=153.9

Q ss_pred             CCCCCcEEEEEcCcc-HHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCC-CCCeEEEEccCCCHHHHHHHhC---
Q 025755            2 SGEDKERVCVTGAGG-YIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGA-SENLQLFKTDLLDYEALCAATA---   76 (248)
Q Consensus         2 ~~l~~k~vlVtG~~g-~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Di~d~~~~~~~~~---   76 (248)
                      +.+++|+++||||+| |||++++++|+++|++|++++|+... .....+.+... ..++.++.+|++|.++++++++   
T Consensus        18 ~~l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~-~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   96 (266)
T 3o38_A           18 GLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERR-LGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTV   96 (266)
T ss_dssp             STTTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHH-HHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHH-HHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHH
Confidence            347899999999986 89999999999999999999998743 22333333332 3689999999999999888875   


Q ss_pred             ----CCCEEEEccccCCCCC----CCCccccchhhhHHHHHHHHHHHHhc-----CCCEEEEEeccceeccCCCCCCCCc
Q 025755           77 ----GCTGVFHVACPVPVGK----VPNPEVQLIDPAVVGTKNVLNSCVKA-----KVKRVVVVSSIGAVMLNPNWPKGQV  143 (248)
Q Consensus        77 ----~id~vi~~ag~~~~~~----~~~~~~~~~~~n~~g~~~~~~~~~~~-----~~~~iV~vSS~~~~~~~~~~~~~~~  143 (248)
                          ++|+||||||......    ..+.++..+++|+.++.++++++.+.     +.++||++||..++.+.+..     
T Consensus        97 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~-----  171 (266)
T 3o38_A           97 EKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQHSQ-----  171 (266)
T ss_dssp             HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTCCCTTC-----
T ss_pred             HHhCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcCCCCCC-----
Confidence                6899999999765432    12345678999999999999888664     55799999998776655432     


Q ss_pred             cCCCCCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCCC--cc--------------
Q 025755          144 MDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTIN--TS--------------  204 (248)
Q Consensus       144 ~~e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~~--~~--------------  204 (248)
                                      ..|+.||++.+.+++.++.+   .+++|++|+||.+.+++......  ..              
T Consensus       172 ----------------~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~r~~~  235 (266)
T 3o38_A          172 ----------------SHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKTSSSELLDRLASDEAFGRAAE  235 (266)
T ss_dssp             ----------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC-----------------CCTTSSCCC
T ss_pred             ----------------chHHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhccCcHHHHHHHHhcCCcCCCCC
Confidence                            34999998666666655543   36999999999999987543210  00              


Q ss_pred             HHHHHHHHcCCCCCCCCCchhhhhhhhhcccee
Q 025755          205 SLLLLGFLKGFFFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       205 ~~~~~~~~~~~~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                      +.-+.....  ++.++...+++|+++.||||++
T Consensus       236 ~~dva~~i~--~l~s~~~~~~tG~~i~vdgG~~  266 (266)
T 3o38_A          236 PWEVAATIA--FLASDYSSYMTGEVVSVSSQRA  266 (266)
T ss_dssp             HHHHHHHHH--HHHSGGGTTCCSCEEEESSCCC
T ss_pred             HHHHHHHHH--HHcCccccCccCCEEEEcCCcC
Confidence            111111111  6667778999999999999964

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=100.00  E-value=2.8e-33  Score=237.25  Aligned_cols=220  Identities=20%  Similarity=0.136  Sum_probs=168.7

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEE
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVF   82 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi   82 (248)
                      .+++|+||||||+||||+++++.|+++|++|++++|+...             .++.++.+|++|.+++.++++++|+||
T Consensus        16 ~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-------------~~~~~~~~Dl~d~~~~~~~~~~~d~vi   82 (347)
T 4id9_A           16 PRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG-------------TGGEEVVGSLEDGQALSDAIMGVSAVL   82 (347)
T ss_dssp             -----CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS-------------SCCSEEESCTTCHHHHHHHHTTCSEEE
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC-------------CCccEEecCcCCHHHHHHHHhCCCEEE
Confidence            3678999999999999999999999999999999998642             467889999999999999999999999


Q ss_pred             EccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccccchH
Q 025755           83 HVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYY  162 (248)
Q Consensus        83 ~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y  162 (248)
                      |+|+.....  ...+..++++|+.++.++++++++.+.++|||+||.. +|+... ....+++|+++..+      .+.|
T Consensus        83 h~A~~~~~~--~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~V~~SS~~-vyg~~~-~~~~~~~E~~~~~~------~~~Y  152 (347)
T 4id9_A           83 HLGAFMSWA--PADRDRMFAVNVEGTRRLLDAASAAGVRRFVFASSGE-VYPENR-PEFLPVTEDHPLCP------NSPY  152 (347)
T ss_dssp             ECCCCCCSS--GGGHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGG-GTTTTS-CSSSSBCTTSCCCC------CSHH
T ss_pred             ECCcccCcc--hhhHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHH-HhCCCC-CCCCCcCCCCCCCC------CChH
Confidence            999976543  2334778999999999999999999999999999965 554411 12556777776544      4569


Q ss_pred             HHHHHHHHHHHHHHHHhCCccEEEEccCeee-------------cCCCCCC----------CCccHHHHHHHHcCCCCCC
Q 025755          163 CLAKTIAEIQALEYAKRGELDIVTVCPSIVI-------------GPMLQPT----------INTSSLLLLGFLKGFFFTT  219 (248)
Q Consensus       163 ~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~-------------g~~~~~~----------~~~~~~~~~~~~~~~~l~~  219 (248)
                      +.+|..+|.+++.++.+++++++++||+++|             ||.+...          ......++..+..+..+..
T Consensus       153 ~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (347)
T 4id9_A          153 GLTKLLGEELVRFHQRSGAMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQNFGNAAIAELLQSRDIGEPSHI  232 (347)
T ss_dssp             HHHHHHHHHHHHHHHHHSSSEEEEEEECEEECGGGTTCTTSSSHHHHHBHHHHHHHHHHHTCHHHHHHHHHHCCSSCCEE
T ss_pred             HHHHHHHHHHHHHHHHhcCCceEEEccceEeecccccccccccCCCCcccccccccccccchhHHHHHHHHHHcCCCeEE
Confidence            9999999999999998889999999999999             7764321          1344556666767665444


Q ss_pred             CCCchhhhhh----hhhccceeEEEeeccC
Q 025755          220 PSHSYMLERT----LVLNQGVRLYRCKIQI  245 (248)
Q Consensus       220 ~~~~~~~g~~----l~vd~g~~~~~~~~~~  245 (248)
                      ..++....+.    +++++...++..+++.
T Consensus       233 ~g~~~~~~~~~~~~i~v~Dva~ai~~~~~~  262 (347)
T 4id9_A          233 LARNENGRPFRMHITDTRDMVAGILLALDH  262 (347)
T ss_dssp             EEECTTCCBCEECEEEHHHHHHHHHHHHHC
T ss_pred             eCCCCcccCCccCcEeHHHHHHHHHHHhcC
Confidence            4333333455    7788777666555543

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=100.00  E-value=1.5e-32  Score=234.31  Aligned_cols=227  Identities=15%  Similarity=0.007  Sum_probs=174.8

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHH--CCCeEEEEEcCCCchhh--HHh---h-hhcCCCCCeEEEEccCCCHHHHHHH
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLL--KGYMVHGTVRDPCDEKN--AHL---K-KLEGASENLQLFKTDLLDYEALCAA   74 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~--~g~~V~~~~r~~~~~~~--~~~---~-~~~~~~~~~~~~~~Di~d~~~~~~~   74 (248)
                      ++++|+||||||+||||++++++|++  .|++|++++|+......  ...   . .......++.++.+|++|.++++++
T Consensus         7 ~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~   86 (362)
T 3sxp_A            7 ELENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLRRL   86 (362)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHHHH
T ss_pred             hcCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHHHh
Confidence            46789999999999999999999999  99999999997641100  000   0 0011234678999999999999999


Q ss_pred             -hCCCCEEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCchh
Q 025755           75 -TAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEE  153 (248)
Q Consensus        75 -~~~id~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~  153 (248)
                       ..++|+||||||....  ....+...+++|+.++.++++++++.+.+ |||+||.. +|+..    ..+++|+++..+ 
T Consensus        87 ~~~~~D~vih~A~~~~~--~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~-~V~~SS~~-vyg~~----~~~~~E~~~~~p-  157 (362)
T 3sxp_A           87 EKLHFDYLFHQAAVSDT--TMLNQELVMKTNYQAFLNLLEIARSKKAK-VIYASSAG-VYGNT----KAPNVVGKNESP-  157 (362)
T ss_dssp             TTSCCSEEEECCCCCGG--GCCCHHHHHHHHTHHHHHHHHHHHHTTCE-EEEEEEGG-GGCSC----CSSBCTTSCCCC-
T ss_pred             hccCCCEEEECCccCCc--cccCHHHHHHHHHHHHHHHHHHHHHcCCc-EEEeCcHH-HhCCC----CCCCCCCCCCCC-
Confidence             7899999999996554  24566789999999999999999998875 99999955 55553    237778776544 


Q ss_pred             hhccccchHHHHHHHHHHHHHHHHHhCCccEEEEccCeeecCCCCCCC---CccHHHHHHHHcCCCCCCCCCchhhhhhh
Q 025755          154 FCKATENYYCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTI---NTSSLLLLGFLKGFFFTTPSHSYMLERTL  230 (248)
Q Consensus       154 ~~~~~~~~Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~---~~~~~~~~~~~~~~~l~~~~~~~~~g~~l  230 (248)
                           .++|+.||..+|.+++.++.+  ++++++||+++|||......   .....++..+..+..+....++....+.+
T Consensus       158 -----~~~Y~~sK~~~E~~~~~~~~~--~~~~~lR~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i  230 (362)
T 3sxp_A          158 -----ENVYGFSKLCMDEFVLSHSND--NVQVGLRYFNVYGPREFYKEKTASMVLQLALGAMAFKEVKLFEFGEQLRDFV  230 (362)
T ss_dssp             -----SSHHHHHHHHHHHHHHHTTTT--SCEEEEEECSEESTTCGGGGGGSCHHHHHHHHHHTTSEEECSGGGCCEEECE
T ss_pred             -----CChhHHHHHHHHHHHHHHhcc--CCEEEEEeCceeCcCCCCCCcchhHHHHHHHHHHhCCCeEEECCCCeEEccE
Confidence                 566999999999999998876  89999999999999875431   35567778888877665555554556678


Q ss_pred             hhccceeEEEeeccC
Q 025755          231 VLNQGVRLYRCKIQI  245 (248)
Q Consensus       231 ~vd~g~~~~~~~~~~  245 (248)
                      ++++...++..+++.
T Consensus       231 ~v~Dva~ai~~~~~~  245 (362)
T 3sxp_A          231 YIEDVIQANVKAMKA  245 (362)
T ss_dssp             EHHHHHHHHHHHTTC
T ss_pred             EHHHHHHHHHHHHhc
Confidence            888887776665554

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=100.00  E-value=9.5e-33  Score=233.34  Aligned_cols=229  Identities=20%  Similarity=0.144  Sum_probs=167.5

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcC-CCCCeEEEEccCCCHHHHHHHhC--CCCE
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEG-ASENLQLFKTDLLDYEALCAATA--GCTG   80 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Di~d~~~~~~~~~--~id~   80 (248)
                      .++|+||||||+||||++++++|+++|++|++++|+...... ..+.+.. ...++.++.+|++|.+++.++++  ++|+
T Consensus         3 ~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~   81 (341)
T 3enk_A            3 STKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKRE-AIARIEKITGKTPAFHETDVSDERALARIFDAHPITA   81 (341)
T ss_dssp             CSSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTH-HHHHHHHHHSCCCEEECCCTTCHHHHHHHHHHSCCCE
T ss_pred             CCCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHH-HHHHHHhhcCCCceEEEeecCCHHHHHHHHhccCCcE
Confidence            356899999999999999999999999999999997653322 1221111 13578999999999999999998  8999


Q ss_pred             EEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccccc
Q 025755           81 VFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATEN  160 (248)
Q Consensus        81 vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~  160 (248)
                      ||||||..........+.+.+++|+.++.++++++++.+.++|||+||.. +++.+.   ..+++|+.+..+      .+
T Consensus        82 vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~-~~g~~~---~~~~~e~~~~~~------~~  151 (341)
T 3enk_A           82 AIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAVKRIVFSSSAT-VYGVPE---RSPIDETFPLSA------TN  151 (341)
T ss_dssp             EEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGG-GBCSCS---SSSBCTTSCCBC------SS
T ss_pred             EEECccccccCccccChHHHHHHHHHHHHHHHHHHHhCCCCEEEEEecce-EecCCC---CCCCCCCCCCCC------CC
Confidence            99999976543222334678899999999999999999989999999966 455432   566777776553      45


Q ss_pred             hHHHHHHHHHHHHHHHHHhCC-ccEEEEccCeeecCCCCCC--------CCccHHHHHHHHcCC--CCCCCC------Cc
Q 025755          161 YYCLAKTIAEIQALEYAKRGE-LDIVTVCPSIVIGPMLQPT--------INTSSLLLLGFLKGF--FFTTPS------HS  223 (248)
Q Consensus       161 ~Y~~sK~~~e~l~~~~~~~~~-i~v~~vrpg~i~g~~~~~~--------~~~~~~~~~~~~~~~--~l~~~~------~~  223 (248)
                      .|+.||.++|.+++.++.+++ ++++++||+++|||.....        ......++.+...+.  .+...+      ++
T Consensus       152 ~Y~~sK~~~e~~~~~~~~~~~~~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g  231 (341)
T 3enk_A          152 PYGQTKLMAEQILRDVEAADPSWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLRVFGSDYPTPDG  231 (341)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCSSHHHHHHHHHHTSSSCEEEECSCSSSTTS
T ss_pred             hhHHHHHHHHHHHHHHhhcCCCceEEEEeeccccCCccccccCCCcccCccchHHHHHHHHhcCCCceEEeCCccCCCCC
Confidence            699999999999999998775 9999999999999964211        112223444444432  222212      33


Q ss_pred             hhhhhhhhhccceeEEEeec
Q 025755          224 YMLERTLVLNQGVRLYRCKI  243 (248)
Q Consensus       224 ~~~g~~l~vd~g~~~~~~~~  243 (248)
                      ....+.+++||...++..++
T Consensus       232 ~~~~~~i~v~Dva~a~~~~~  251 (341)
T 3enk_A          232 TGVRDYIHVVDLARGHIAAL  251 (341)
T ss_dssp             SCEECEEEHHHHHHHHHHHH
T ss_pred             CeeEeeEEHHHHHHHHHHHH
Confidence            33445778877766554433

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=100.00  E-value=2.3e-32  Score=223.43  Aligned_cols=214  Identities=14%  Similarity=0.093  Sum_probs=155.8

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCC-CCCeEEEEccCCCHHHHHHHhC-----
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGA-SENLQLFKTDLLDYEALCAATA-----   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Di~d~~~~~~~~~-----   76 (248)
                      ++++|+++||||+||||++++++|+++|++|++++|+.... ....+.+... ..++.++.+|++|.++++++++     
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~-~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   82 (263)
T 3ai3_A            4 GISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRL-HEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSS   82 (263)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHH-HHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            47889999999999999999999999999999999986422 2222222221 3578899999999999988876     


Q ss_pred             --CCCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHHh----cCCCEEEEEeccceeccCCCCCCCCccCC
Q 025755           77 --GCTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCVK----AKVKRVVVVSSIGAVMLNPNWPKGQVMDE  146 (248)
Q Consensus        77 --~id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~~----~~~~~iV~vSS~~~~~~~~~~~~~~~~~e  146 (248)
                        ++|+||||||.......    .+.|+..+++|+.++.++++++.+    .+.++||++||..++.+.+.         
T Consensus        83 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---------  153 (263)
T 3ai3_A           83 FGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICAVQPLWY---------  153 (263)
T ss_dssp             HSSCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT---------
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCCC---------
Confidence              78999999997653321    234567899999999888888754    46789999999876655432         


Q ss_pred             CCCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCCC--------ccHHHHHHHH---
Q 025755          147 ECWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTIN--------TSSLLLLGFL---  212 (248)
Q Consensus       147 ~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~~--------~~~~~~~~~~---  212 (248)
                                  ...|+.||+..+.+.+.++.+   .++++++|+||+++||+......        ........+.   
T Consensus       154 ------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (263)
T 3ai3_A          154 ------------EPIYNVTKAALMMFSKTLATEVIKDNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEH  221 (263)
T ss_dssp             ------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHTTTTTCCHHHHHHHHHHHH
T ss_pred             ------------cchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhhhhHhhhcccCCcHHHHHHHHHhcC
Confidence                        233999998666666665543   36999999999999986431100        0111111111   


Q ss_pred             --cCC------------CCCCCCCchhhhhhhhhccceeE
Q 025755          213 --KGF------------FFTTPSHSYMLERTLVLNQGVRL  238 (248)
Q Consensus       213 --~~~------------~l~~~~~~~~~g~~l~vd~g~~~  238 (248)
                        .++            ++.++...|++|+++.+|||..+
T Consensus       222 ~p~~~~~~~~dvA~~~~~l~s~~~~~~~G~~~~vdgG~~~  261 (263)
T 3ai3_A          222 APIKRFASPEELANFFVFLCSERATYSVGSAYFVDGGMLK  261 (263)
T ss_dssp             CTTCSCBCHHHHHHHHHHHTSTTCTTCCSCEEEESTTCCC
T ss_pred             CCCCCCcCHHHHHHHHHHHcCccccCCCCcEEEECCCccc
Confidence              111            66677778999999999999753

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=100.00  E-value=1.6e-32  Score=229.56  Aligned_cols=218  Identities=17%  Similarity=0.143  Sum_probs=168.0

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEEcc
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFHVA   85 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~~a   85 (248)
                      ||+||||||+||||++++++|+++|+.|++..++... ...       ....+.++.+|++| +++.++++++|+|||+|
T Consensus         1 M~~vlVTGatG~iG~~l~~~L~~~g~~v~~~~~~~~~-~~~-------~~~~~~~~~~Dl~~-~~~~~~~~~~d~vih~a   71 (313)
T 3ehe_A            1 MSLIVVTGGAGFIGSHVVDKLSESNEIVVIDNLSSGN-EEF-------VNEAARLVKADLAA-DDIKDYLKGAEEVWHIA   71 (313)
T ss_dssp             --CEEEETTTSHHHHHHHHHHTTTSCEEEECCCSSCC-GGG-------SCTTEEEECCCTTT-SCCHHHHTTCSEEEECC
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCCCEEEEEcCCCCC-hhh-------cCCCcEEEECcCCh-HHHHHHhcCCCEEEECC
Confidence            4699999999999999999999999555444443321 111       13568999999999 89999999999999999


Q ss_pred             ccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccccchHHHH
Q 025755           86 CPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLA  165 (248)
Q Consensus        86 g~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~s  165 (248)
                      +..........+..++++|+.++.++++++++.+.++|||+||.. +|+...   ..+++|+.+..+      .+.|+.+
T Consensus        72 ~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~-vyg~~~---~~~~~E~~~~~~------~~~Y~~s  141 (313)
T 3ehe_A           72 ANPDVRIGAENPDEIYRNNVLATYRLLEAMRKAGVSRIVFTSTST-VYGEAK---VIPTPEDYPTHP------ISLYGAS  141 (313)
T ss_dssp             CCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEECCGG-GGCSCS---SSSBCTTSCCCC------CSHHHHH
T ss_pred             CCCChhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCchH-HhCcCC---CCCCCCCCCCCC------CCHHHHH
Confidence            976554445667889999999999999999999989999999965 455432   566777766543      4569999


Q ss_pred             HHHHHHHHHHHHHhCCccEEEEccCeeecCCCCCCCCccHHHHHHHHcCC-CCCCCCCchhhhhhhhhccceeEEEeecc
Q 025755          166 KTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKGF-FFTTPSHSYMLERTLVLNQGVRLYRCKIQ  244 (248)
Q Consensus       166 K~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~~~g~~l~vd~g~~~~~~~~~  244 (248)
                      |..+|.+++.++.+++++++++||+++|||....  .....++.++..+. .+....++....+.+++|+...++..++.
T Consensus       142 K~~~e~~~~~~~~~~g~~~~ilRp~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~  219 (313)
T 3ehe_A          142 KLACEALIESYCHTFDMQAWIYRFANVIGRRSTH--GVIYDFIMKLKRNPEELEILGNGEQNKSYIYISDCVDAMLFGLR  219 (313)
T ss_dssp             HHHHHHHHHHHHHHTTCEEEEEECSCEESTTCCC--SHHHHHHHHHHHCTTEEEESTTSCCEECCEEHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHhcCCCEEEEeeccccCcCCCc--ChHHHHHHHHHcCCCceEEeCCCCeEEeEEEHHHHHHHHHHHhc
Confidence            9999999999999888999999999999998654  35566777776663 34344455455567888888777666554

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=100.00  E-value=6.6e-33  Score=231.57  Aligned_cols=216  Identities=24%  Similarity=0.234  Sum_probs=167.5

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEEccc
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFHVAC   86 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~~ag   86 (248)
                      |+||||||+||||++++++|+++|++|++++|+.......       ...++.++.+|+.|.+ +.+++++ |+|||+|+
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-------~~~~~~~~~~Dl~d~~-~~~~~~~-d~vih~A~   71 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREF-------VNPSAELHVRDLKDYS-WGAGIKG-DVVFHFAA   71 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGG-------SCTTSEEECCCTTSTT-TTTTCCC-SEEEECCS
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhh-------cCCCceEEECccccHH-HHhhcCC-CEEEECCC
Confidence            5899999999999999999999999999999976432111       1357889999999988 8888888 99999999


Q ss_pred             cCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccccchHHHHH
Q 025755           87 PVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAK  166 (248)
Q Consensus        87 ~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK  166 (248)
                      ..........+...+++|+.++.++++++++.+.++|||+||.. +|+...   ..+++|+.+..+      .+.|+.+|
T Consensus        72 ~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~-vyg~~~---~~~~~e~~~~~p------~~~Y~~sK  141 (312)
T 3ko8_A           72 NPEVRLSTTEPIVHFNENVVATFNVLEWARQTGVRTVVFASSST-VYGDAD---VIPTPEEEPYKP------ISVYGAAK  141 (312)
T ss_dssp             SCSSSGGGSCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGG-GGCSCS---SSSBCTTSCCCC------CSHHHHHH
T ss_pred             CCCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCcHH-HhCCCC---CCCCCCCCCCCC------CChHHHHH
Confidence            75544445566788999999999999999999999999999966 454432   466777766544      45699999


Q ss_pred             HHHHHHHHHHHHhCCccEEEEccCeeecCCCCCCCCccHHHHHHHHcCC-CCCCCCCchhhhhhhhhccceeEEEeec
Q 025755          167 TIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKGF-FFTTPSHSYMLERTLVLNQGVRLYRCKI  243 (248)
Q Consensus       167 ~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~~~g~~l~vd~g~~~~~~~~  243 (248)
                      ..+|.+++.++.+++++++++||+++|||....  .....++.++..+. .+....++....+.+++++...++..++
T Consensus       142 ~~~e~~~~~~~~~~g~~~~~lrp~~v~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~  217 (312)
T 3ko8_A          142 AAGEVMCATYARLFGVRCLAVRYANVVGPRLRH--GVIYDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAVEATLAAW  217 (312)
T ss_dssp             HHHHHHHHHHHHHHCCEEEEEEECEEECTTCCS--SHHHHHHHHHHHCTTEEEEC----CEECEEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCCEEEEeeccccCcCCCC--ChHHHHHHHHHhCCCCeEEcCCCCeEEeeEEHHHHHHHHHHHH
Confidence            999999999998878999999999999998654  34556677776663 3334444444556788888766655444

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=100.00  E-value=9.9e-33  Score=233.85  Aligned_cols=224  Identities=17%  Similarity=0.146  Sum_probs=164.4

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHC--CCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEE
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLK--GYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFH   83 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~   83 (248)
                      ||+||||||+||||++++++|+++  |++|++++|+...........+.  ..++.++.+|++|.+++.++++++|+|||
T Consensus         4 m~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~d~vih   81 (348)
T 1oc2_A            4 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAIL--GDRVELVVGDIADAELVDKLAAKADAIVH   81 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGC--SSSEEEEECCTTCHHHHHHHHTTCSEEEE
T ss_pred             CcEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhhc--cCCeEEEECCCCCHHHHHHHhhcCCEEEE
Confidence            589999999999999999999998  89999999975322222222221  25789999999999999999999999999


Q ss_pred             ccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCC---------CCCCccCCCCCCchhh
Q 025755           84 VACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNW---------PKGQVMDEECWSDEEF  154 (248)
Q Consensus        84 ~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~---------~~~~~~~e~~~~~~~~  154 (248)
                      +||..........+..++++|+.++.++++++.+.+. +|||+||... |+....         ....+++|+++..   
T Consensus        82 ~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~-~~v~~SS~~v-yg~~~~~~~~~~~~~~~~~~~~E~~~~~---  156 (348)
T 1oc2_A           82 YAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDI-RFHHVSTDEV-YGDLPLREDLPGHGEGPGEKFTAETNYN---  156 (348)
T ss_dssp             CCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGG-GCCBCCGGGSTTTTCSTTSSBCTTSCCC---
T ss_pred             CCcccCccchhhCHHHHHHHHHHHHHHHHHHHHHhCC-eEEEecccce-eCCCcccccccccccccCCCcCCCCCCC---
Confidence            9997543211234467899999999999999999887 9999999764 433210         0114566665543   


Q ss_pred             hccccchHHHHHHHHHHHHHHHHHhCCccEEEEccCeeecCCCCCCCCccHHHHHHHHcCCCCCCCCCchhhhhhhhhcc
Q 025755          155 CKATENYYCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKGFFFTTPSHSYMLERTLVLNQ  234 (248)
Q Consensus       155 ~~~~~~~Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~l~vd~  234 (248)
                         +.+.|+.+|..+|.++..++.+++++++++||+.+|||..... .....++..+..+..+....++....+.+++++
T Consensus       157 ---~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  232 (348)
T 1oc2_A          157 ---PSSPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIE-KFIPRQITNILAGIKPKLYGEGKNVRDWIHTND  232 (348)
T ss_dssp             ---CCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTT-SHHHHHHHHHHHTCCCEEETTSCCEEECEEHHH
T ss_pred             ---CCCccHHHHHHHHHHHHHHHHHhCCCEEEEeeceeeCCCCCcc-chHHHHHHHHHcCCCceEecCCCceEeeEEHHH
Confidence               3566999999999999999887789999999999999987532 344556666766654433333333345566666


Q ss_pred             ceeEEE
Q 025755          235 GVRLYR  240 (248)
Q Consensus       235 g~~~~~  240 (248)
                      ...++.
T Consensus       233 va~~~~  238 (348)
T 1oc2_A          233 HSTGVW  238 (348)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            554443

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=100.00  E-value=2e-32  Score=222.14  Aligned_cols=211  Identities=13%  Similarity=0.112  Sum_probs=146.9

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC------
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA------   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~------   76 (248)
                      ++++|+++||||+||||++++++|+++|++|++++|+..+.....++   ....++.++.+|++|.++++++++      
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~---~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (249)
T 2ew8_A            4 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIR---NLGRRVLTVKCDVSQPGDVEAFGKQVISTF   80 (249)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHH---HTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHH---hcCCcEEEEEeecCCHHHHHHHHHHHHHHc
Confidence            47889999999999999999999999999999999986222222222   224578999999999999888754      


Q ss_pred             -CCCEEEEccccCCCCC----CCCccccchhhhHHHHHHHHHHH----HhcCCCEEEEEeccceeccCCCCCCCCccCCC
Q 025755           77 -GCTGVFHVACPVPVGK----VPNPEVQLIDPAVVGTKNVLNSC----VKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEE  147 (248)
Q Consensus        77 -~id~vi~~ag~~~~~~----~~~~~~~~~~~n~~g~~~~~~~~----~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~  147 (248)
                       ++|+||||||......    ..+.+...+++|+.++.++++++    ++.+.++||++||..++.+.+..         
T Consensus        81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~---------  151 (249)
T 2ew8_A           81 GRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAY---------  151 (249)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCSSC---------
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCCCc---------
Confidence             7899999999765432    12345678999999988887774    44567899999998776654332         


Q ss_pred             CCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCC-CCCCccHHHHHHH--HcCC------
Q 025755          148 CWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQ-PTINTSSLLLLGF--LKGF------  215 (248)
Q Consensus       148 ~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~-~~~~~~~~~~~~~--~~~~------  215 (248)
                                  ..|+.||+..+.+.+.++.+   .++++|+|+||.+.+++.. ............+  ..++      
T Consensus       152 ------------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~d  219 (249)
T 2ew8_A          152 ------------THYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAMFDVLPNMLQAIPRLQVPLD  219 (249)
T ss_dssp             ------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC------------------CTTSSSCSCCCTHH
T ss_pred             ------------hhHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcCcCccchhccccchhhHHHHhhCccCCCCCHHH
Confidence                        33999998666665555543   2699999999999998754 2100000111100  0011      


Q ss_pred             ------CCCCCCCchhhhhhhhhcccee
Q 025755          216 ------FFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       216 ------~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                            ++.++...|++|+++.+|||..
T Consensus       220 va~~~~~l~s~~~~~~tG~~~~vdGG~~  247 (249)
T 2ew8_A          220 LTGAAAFLASDDASFITGQTLAVDGGMV  247 (249)
T ss_dssp             HHHHHHHHTSGGGTTCCSCEEEESSSCC
T ss_pred             HHHHHHHHcCcccCCCCCcEEEECCCcc
Confidence                  5666667899999999999965

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=100.00  E-value=5.9e-32  Score=224.14  Aligned_cols=224  Identities=16%  Similarity=0.080  Sum_probs=156.6

Q ss_pred             CCCCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC---C
Q 025755            1 MSGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA---G   77 (248)
Q Consensus         1 m~~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~---~   77 (248)
                      |+++++|+++||||+||||++++++|+++|++|++++|+.... ....+.+   ..++.++.+|++|.++++++++   +
T Consensus        11 ~~~l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~-~~~~~~~---~~~~~~~~~Dl~d~~~v~~~~~~~~~   86 (291)
T 3rd5_A           11 LPSFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKG-EAAARTM---AGQVEVRELDLQDLSSVRRFADGVSG   86 (291)
T ss_dssp             CCCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHTTS---SSEEEEEECCTTCHHHHHHHHHTCCC
T ss_pred             ccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHH-HHHHHHh---cCCeeEEEcCCCCHHHHHHHHHhcCC
Confidence            4568899999999999999999999999999999999986422 2222222   4578999999999999999987   5


Q ss_pred             CCEEEEccccCCCC--CCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhh
Q 025755           78 CTGVFHVACPVPVG--KVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFC  155 (248)
Q Consensus        78 id~vi~~ag~~~~~--~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~  155 (248)
                      +|+||||||.....  ...+.++..+++|+.|+.++++++.+...++||++||..++.+.....  ....+..+.     
T Consensus        87 iD~lv~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~riv~isS~~~~~~~~~~~--~~~~~~~~~-----  159 (291)
T 3rd5_A           87 ADVLINNAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPRLTDRVVTVSSMAHWPGRINLE--DLNWRSRRY-----  159 (291)
T ss_dssp             EEEEEECCCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEEEEEEECCGGGTTCCCCSS--CTTCSSSCC-----
T ss_pred             CCEEEECCcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeEeechhhccCCCCcc--cccccccCC-----
Confidence            69999999986543  224566789999999999999999998667999999987765543211  111111222     


Q ss_pred             ccccchHHHHHHHHHHHHHHHHHhC---C--ccEEEEccCeeecCCCCCCCCccHHHHHHHHcC-------------CCC
Q 025755          156 KATENYYCLAKTIAEIQALEYAKRG---E--LDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKG-------------FFF  217 (248)
Q Consensus       156 ~~~~~~Y~~sK~~~e~l~~~~~~~~---~--i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~~-------------~~l  217 (248)
                       .+...|+.||++.+.+++.++.++   +  +++++|+||.+.+++...........+.+...+             .++
T Consensus       160 -~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~l  238 (291)
T 3rd5_A          160 -SPWLAYSQSKLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGASGRKLGDALMSAATRVVATDADFGARQTLYA  238 (291)
T ss_dssp             -CHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC--------------------CHHHHHHHHHHHHH
T ss_pred             -CCcchHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEeeCCCCccccccccchHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence             223559999986666655555432   3  999999999999998654311111111110000             044


Q ss_pred             CCCCCchhhhhhhhhccceeE
Q 025755          218 TTPSHSYMLERTLVLNQGVRL  238 (248)
Q Consensus       218 ~~~~~~~~~g~~l~vd~g~~~  238 (248)
                      .++  .+++|+.+.+|||...
T Consensus       239 ~~~--~~~~G~~~~vdgG~~~  257 (291)
T 3rd5_A          239 ASQ--DLPGDSFVGPRFGYLG  257 (291)
T ss_dssp             HHS--CCCTTCEEEETTSSSS
T ss_pred             HcC--CCCCCceeCCcccccC
Confidence            444  4899999999999763

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=100.00  E-value=1.9e-32  Score=224.72  Aligned_cols=210  Identities=17%  Similarity=0.192  Sum_probs=157.2

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-------
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-------   76 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-------   76 (248)
                      +++|+++||||+||||+++++.|+++|++|++.+++..+..............++.++.+|++|.++++++++       
T Consensus        23 ~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  102 (269)
T 3gk3_A           23 QAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADFG  102 (269)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             hcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            6789999999999999999999999999999998655433334344444446789999999999999888876       


Q ss_pred             CCCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHHh----cCCCEEEEEeccceeccCCCCCCCCccCCCC
Q 025755           77 GCTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCVK----AKVKRVVVVSSIGAVMLNPNWPKGQVMDEEC  148 (248)
Q Consensus        77 ~id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~~----~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~  148 (248)
                      ++|+||||||.......    .+.+...+++|+.++.++++++.+    .+.++||++||..+..+.+..          
T Consensus       103 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~----------  172 (269)
T 3gk3_A          103 KVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRGAFGQ----------  172 (269)
T ss_dssp             CCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTB----------
T ss_pred             CCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhhccCCCCc----------
Confidence            78999999998654321    234567899999999988888754    466899999998877665432          


Q ss_pred             CCchhhhccccchHHHHHHHHHHHH----HHHHHhCCccEEEEccCeeecCCCCCCCCc----------------cHHHH
Q 025755          149 WSDEEFCKATENYYCLAKTIAEIQA----LEYAKRGELDIVTVCPSIVIGPMLQPTINT----------------SSLLL  208 (248)
Q Consensus       149 ~~~~~~~~~~~~~Y~~sK~~~e~l~----~~~~~~~~i~v~~vrpg~i~g~~~~~~~~~----------------~~~~~  208 (248)
                                 ..|+.||++.+.++    .++.++ |++|++|+||.+.+++.......                .+..+
T Consensus       173 -----------~~Y~asKaa~~~~~~~la~e~~~~-gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~dv  240 (269)
T 3gk3_A          173 -----------ANYASAKAGIHGFTKTLALETAKR-GITVNTVSPGYLATAMVEAVPQDVLEAKILPQIPVGRLGRPDEV  240 (269)
T ss_dssp             -----------HHHHHHHHHHHHHHHHHHHHHGGG-TEEEEEEEECSBCCTTTTC-------CCSGGGCTTSSCBCHHHH
T ss_pred             -----------chHHHHHHHHHHHHHHHHHHhhhc-CCEEEEEecCcccchhhhhhchhHHHHHhhhcCCcCCccCHHHH
Confidence                       33999998555554    444443 59999999999999876432110                11122


Q ss_pred             HHHHcCCCCCCCCCchhhhhhhhhcccee
Q 025755          209 LGFLKGFFFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       209 ~~~~~~~~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                      .....  ++.++...|++|+++.||||..
T Consensus       241 A~~v~--~L~s~~~~~itG~~i~vdgG~~  267 (269)
T 3gk3_A          241 AALIA--FLCSDDAGFVTGADLAINGGMH  267 (269)
T ss_dssp             HHHHH--HHTSTTCTTCCSCEEEESTTSC
T ss_pred             HHHHH--HHhCCCcCCeeCcEEEECCCEe
Confidence            22221  6778888999999999999975

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=7.3e-33  Score=225.56  Aligned_cols=218  Identities=13%  Similarity=0.070  Sum_probs=153.0

Q ss_pred             CCCCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC----
Q 025755            1 MSGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA----   76 (248)
Q Consensus         1 m~~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~----   76 (248)
                      |+++++|+++||||+||||++++++|+++|++|++++|+...  ....+.+.    + .++.+|++|.++++++++    
T Consensus         1 M~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~--~~~~~~~~----~-~~~~~D~~~~~~~~~~~~~~~~   73 (256)
T 2d1y_A            1 MGLFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG--KEVAEAIG----G-AFFQVDLEDERERVRFVEEAAY   73 (256)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH--HHHHHHHT----C-EEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH--HHHHHHhh----C-CEEEeeCCCHHHHHHHHHHHHH
Confidence            777899999999999999999999999999999999998753  22223221    4 788999999998888775    


Q ss_pred             ---CCCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHHh----cCCCEEEEEeccceeccCCCCCCCCccC
Q 025755           77 ---GCTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCVK----AKVKRVVVVSSIGAVMLNPNWPKGQVMD  145 (248)
Q Consensus        77 ---~id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~~----~~~~~iV~vSS~~~~~~~~~~~~~~~~~  145 (248)
                         ++|+||||||.......    .+.+...+++|+.++.++++++.+    .+.++||++||..+..+.+.        
T Consensus        74 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~--------  145 (256)
T 2d1y_A           74 ALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQE--------  145 (256)
T ss_dssp             HHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCTT--------
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccccCCCCC--------
Confidence               68999999997654322    234567899999999999888754    46689999999877665432        


Q ss_pred             CCCCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCC-------CCCccHHHHHHHHcCC
Q 025755          146 EECWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQP-------TINTSSLLLLGFLKGF  215 (248)
Q Consensus       146 e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~-------~~~~~~~~~~~~~~~~  215 (248)
                                   ...|+.||+..+.+.+.++.+   .++++|+|+||.+.+++...       .......+......++
T Consensus       146 -------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (256)
T 2d1y_A          146 -------------NAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRR  212 (256)
T ss_dssp             -------------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTTSTTSS
T ss_pred             -------------ChhHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCccCchhhhccccccCCHHHHHHHHhcCCCCC
Confidence                         234999998666666655543   26999999999999875321       0000001100000011


Q ss_pred             ------------CCCCCCCchhhhhhhhhccceeEEEeeccCC
Q 025755          216 ------------FFTTPSHSYMLERTLVLNQGVRLYRCKIQIP  246 (248)
Q Consensus       216 ------------~l~~~~~~~~~g~~l~vd~g~~~~~~~~~~p  246 (248)
                                  ++..+...|++|+++.+|||..+.......|
T Consensus       213 ~~~~~dvA~~~~~l~s~~~~~~~G~~~~v~gG~~~~~~~~~~~  255 (256)
T 2d1y_A          213 LGKPEEVAEAVLFLASEKASFITGAILPVDGGMTASFMMAGRP  255 (256)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGBC------
T ss_pred             CcCHHHHHHHHHHHhCchhcCCCCCEEEECCCccccccccCCc
Confidence                        5556666799999999999987544443333

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=100.00  E-value=2.8e-32  Score=223.15  Aligned_cols=215  Identities=15%  Similarity=0.127  Sum_probs=143.7

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHh-------
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAAT-------   75 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~-------   75 (248)
                      ++++|+++||||+||||++++++|+++|++|++++|+... .....+.+.....++.++.+|++|.+++++++       
T Consensus        11 ~l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   89 (266)
T 1xq1_A           11 SLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYE-LNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMF   89 (266)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHH-HHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHh
Confidence            3678999999999999999999999999999999998642 22223333333457899999999999988877       


Q ss_pred             -CCCCEEEEccccCCCCC----CCCccccchhhhHHHHHHHHHHHH----hcCCCEEEEEeccceeccCCCCCCCCccCC
Q 025755           76 -AGCTGVFHVACPVPVGK----VPNPEVQLIDPAVVGTKNVLNSCV----KAKVKRVVVVSSIGAVMLNPNWPKGQVMDE  146 (248)
Q Consensus        76 -~~id~vi~~ag~~~~~~----~~~~~~~~~~~n~~g~~~~~~~~~----~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e  146 (248)
                       .++|+||||||......    ..+.+...+++|+.++.++++++.    +.+.++||++||..++.+.+..        
T Consensus        90 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~--------  161 (266)
T 1xq1_A           90 GGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVG--------  161 (266)
T ss_dssp             TTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC----------C--------
T ss_pred             CCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhccCCCCC--------
Confidence             57899999999765332    123456789999999999988884    4567899999998766554332        


Q ss_pred             CCCCchhhhccccchHHHHHHHHHHHHHHHHHhC---CccEEEEccCeeecCCCCCCC--CccHHHHHHHHcCC------
Q 025755          147 ECWSDEEFCKATENYYCLAKTIAEIQALEYAKRG---ELDIVTVCPSIVIGPMLQPTI--NTSSLLLLGFLKGF------  215 (248)
Q Consensus       147 ~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~---~i~v~~vrpg~i~g~~~~~~~--~~~~~~~~~~~~~~------  215 (248)
                                   ..|+.||++.+.+.+.++.+.   ++++++|+||+++||+.....  ............++      
T Consensus       162 -------------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  228 (266)
T 1xq1_A          162 -------------SIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDDEFKKVVISRKPLGRFGEPEE  228 (266)
T ss_dssp             -------------CHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC-------------------------CCGGG
T ss_pred             -------------chHHHHHHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccchhhhhcCHHHHHHHHhcCCCCCCcCHHH
Confidence                         339999987777777666542   699999999999999754321  00000100000011      


Q ss_pred             ------CCCCCCCchhhhhhhhhccceeEE
Q 025755          216 ------FFTTPSHSYMLERTLVLNQGVRLY  239 (248)
Q Consensus       216 ------~l~~~~~~~~~g~~l~vd~g~~~~  239 (248)
                            ++..+...+++|+++.+|||+...
T Consensus       229 va~~~~~l~~~~~~~~~G~~~~v~gG~~~~  258 (266)
T 1xq1_A          229 VSSLVAFLCMPAASYITGQTICVDGGLTVN  258 (266)
T ss_dssp             GHHHHHHHTSGGGTTCCSCEEECCCCEEET
T ss_pred             HHHHHHHHcCccccCccCcEEEEcCCcccc
Confidence                  555566779999999999998753

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=6.9e-33  Score=228.26  Aligned_cols=215  Identities=16%  Similarity=0.140  Sum_probs=150.0

Q ss_pred             CCCCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhh---cCCCCCeEEEEccCCCHHHHHHHhC-
Q 025755            1 MSGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKL---EGASENLQLFKTDLLDYEALCAATA-   76 (248)
Q Consensus         1 m~~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~~~~Di~d~~~~~~~~~-   76 (248)
                      |.++++|+++||||+||||+++++.|+++|++|++++|+.... ....+.+   .....++.++.+|++|.++++++++ 
T Consensus         1 m~~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   79 (278)
T 1spx_A            1 MTRFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERL-EETRQQILAAGVSEQNVNSVVADVTTDAGQDEILST   79 (278)
T ss_dssp             -CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHH
Confidence            6678999999999999999999999999999999999986422 2222222   2224578899999999999998887 


Q ss_pred             ------CCCEEEEccccCCCCC--------CCCccccchhhhHHHHHHHHHHHHhc----CCCEEEEEeccce-eccCCC
Q 025755           77 ------GCTGVFHVACPVPVGK--------VPNPEVQLIDPAVVGTKNVLNSCVKA----KVKRVVVVSSIGA-VMLNPN  137 (248)
Q Consensus        77 ------~id~vi~~ag~~~~~~--------~~~~~~~~~~~n~~g~~~~~~~~~~~----~~~~iV~vSS~~~-~~~~~~  137 (248)
                            ++|+||||||......        ..+.++..+++|+.++.++++++.+.    + ++||++||..+ +.+.+.
T Consensus        80 ~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~  158 (278)
T 1spx_A           80 TLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASGLHATPD  158 (278)
T ss_dssp             HHHHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSSSSCCTT
T ss_pred             HHHHcCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEecccccccCCCC
Confidence                  7999999999764321        22345678999999999998888764    5 89999999876 544332


Q ss_pred             CCCCCccCCCCCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCC---Ccc-------
Q 025755          138 WPKGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTI---NTS-------  204 (248)
Q Consensus       138 ~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~---~~~-------  204 (248)
                                           ...|+.||+..+.+.+.++.+   .|+++++|+||.++|++.....   ...       
T Consensus       159 ---------------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~  217 (278)
T 1spx_A          159 ---------------------FPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTM  217 (278)
T ss_dssp             ---------------------SHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHH
T ss_pred             ---------------------ccHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccccccccCchhhhhhhHHH
Confidence                                 233999998666666665543   3699999999999999754210   000       


Q ss_pred             HHHHHHHHcCC------------CCCCCCCch-hhhhhhhhccceeE
Q 025755          205 SLLLLGFLKGF------------FFTTPSHSY-MLERTLVLNQGVRL  238 (248)
Q Consensus       205 ~~~~~~~~~~~------------~l~~~~~~~-~~g~~l~vd~g~~~  238 (248)
                      ..+......++            ++.++...+ ++|+++.+|||...
T Consensus       218 ~~~~~~~p~~~~~~~~dvA~~v~~l~s~~~~~~~tG~~~~vdgG~~~  264 (278)
T 1spx_A          218 ATMKECVPAGVMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGGSSL  264 (278)
T ss_dssp             HHHHHHCTTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGG
T ss_pred             HHHHhcCCCcCCCCHHHHHHHHHHHcCccccCcccCcEEEECCCccc
Confidence            11111111111            444444555 89999999999753

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=99.98  E-value=4.9e-33  Score=227.43  Aligned_cols=214  Identities=17%  Similarity=0.143  Sum_probs=155.0

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-------
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-------   76 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-------   76 (248)
                      +++|+++||||+||||++++++|+++|++|++++|+..+......+.......++.++++|++|.++++++++       
T Consensus         5 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   84 (264)
T 3i4f_A            5 RFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHFG   84 (264)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             cccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            5689999999999999999999999999999998876443333333333334679999999999999988876       


Q ss_pred             CCCEEEEccccC--CCCC----CCCccccchhhhHHHHHHHHHHH----HhcCCCEEEEEecccee--ccCCCCCCCCcc
Q 025755           77 GCTGVFHVACPV--PVGK----VPNPEVQLIDPAVVGTKNVLNSC----VKAKVKRVVVVSSIGAV--MLNPNWPKGQVM  144 (248)
Q Consensus        77 ~id~vi~~ag~~--~~~~----~~~~~~~~~~~n~~g~~~~~~~~----~~~~~~~iV~vSS~~~~--~~~~~~~~~~~~  144 (248)
                      ++|+||||||+.  ....    ..+.+...+++|+.++.++++++    ++.+.++||++||....  .+.+.       
T Consensus        85 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~-------  157 (264)
T 3i4f_A           85 KIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGADSAPGWIY-------  157 (264)
T ss_dssp             CCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTTGGGCCCCTT-------
T ss_pred             CCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCeEEEEeechhcccCCCCC-------
Confidence            789999999942  2211    12345678999999999999988    44567899999986432  11111       


Q ss_pred             CCCCCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCCCc---------------cHH
Q 025755          145 DEECWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTINT---------------SSL  206 (248)
Q Consensus       145 ~e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~~~---------------~~~  206 (248)
                                    ...|+.||++.+.+.+.++.+   .++++++|+||.+++++.......               .+.
T Consensus       158 --------------~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~r~~~~~  223 (264)
T 3i4f_A          158 --------------RSAFAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEATIQEARQLKEHNTPIGRSGTGE  223 (264)
T ss_dssp             --------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSCCHHHHHHC--------CCCCHH
T ss_pred             --------------CchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccchhccHHHHHHHhhcCCCCCCcCHH
Confidence                          234999998666665555543   369999999999999986542110               011


Q ss_pred             HHHHHHcCCCCCCCCCchhhhhhhhhccceeEEE
Q 025755          207 LLLGFLKGFFFTTPSHSYMLERTLVLNQGVRLYR  240 (248)
Q Consensus       207 ~~~~~~~~~~l~~~~~~~~~g~~l~vd~g~~~~~  240 (248)
                      -+.....  ++.++...+++|+++.+|||.....
T Consensus       224 dva~~v~--~l~s~~~~~itG~~i~vdGG~~~~~  255 (264)
T 3i4f_A          224 DIARTIS--FLCEDDSDMITGTIIEVTGAVDVIH  255 (264)
T ss_dssp             HHHHHHH--HHHSGGGTTCCSCEEEESCSCCCCC
T ss_pred             HHHHHHH--HHcCcccCCCCCcEEEEcCceeecc
Confidence            1111111  6667778899999999999987643

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=99.98  E-value=1.6e-32  Score=223.02  Aligned_cols=209  Identities=18%  Similarity=0.152  Sum_probs=135.0

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC------
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA------   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~------   76 (248)
                      ++++|+++||||+||||++++++|+++|++|++++|+.+. .....+.+.....++.++.+|++|.++++++++      
T Consensus         6 ~~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (253)
T 3qiv_A            6 RFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEA-AEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEF   84 (253)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHH-HHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHH-HHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            4789999999999999999999999999999999998642 233333444445678999999999999988876      


Q ss_pred             -CCCEEEEccccCC---CC----CCCCccccchhhhHHHHHHHHHHH----HhcCCCEEEEEeccceeccCCCCCCCCcc
Q 025755           77 -GCTGVFHVACPVP---VG----KVPNPEVQLIDPAVVGTKNVLNSC----VKAKVKRVVVVSSIGAVMLNPNWPKGQVM  144 (248)
Q Consensus        77 -~id~vi~~ag~~~---~~----~~~~~~~~~~~~n~~g~~~~~~~~----~~~~~~~iV~vSS~~~~~~~~~~~~~~~~  144 (248)
                       ++|+||||||...   ..    ...+.+...+++|+.++.++.+++    ++.+.++||++||..++.+.         
T Consensus        85 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------  155 (253)
T 3qiv_A           85 GGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAWLYS---------  155 (253)
T ss_dssp             SCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC----------------
T ss_pred             CCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEECCccccCCC---------
Confidence             7899999999742   11    112345678999999976666665    44567899999997765221         


Q ss_pred             CCCCCCchhhhccccchHHHHHHHHHHHHHHHHHhC---CccEEEEccCeeecCCCCCCCCccHHHHHHHHcC----C--
Q 025755          145 DEECWSDEEFCKATENYYCLAKTIAEIQALEYAKRG---ELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKG----F--  215 (248)
Q Consensus       145 ~e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~---~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~~----~--  215 (248)
                                     ..|+.||++.+.+++.++.++   ++++++|+||.+++|+......  ..+...+..+    +  
T Consensus       156 ---------------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~  218 (253)
T 3qiv_A          156 ---------------NYYGLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEANRTTTP--KEMVDDIVKGLPLSRMG  218 (253)
T ss_dssp             -------------------CCHHHHHHHHHHHHHHTTTTTEEEEEEEC--------------------------------
T ss_pred             ---------------chhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccchhhcCc--HHHHHHHhccCCCCCCC
Confidence                           229999997777777777654   6999999999999997643210  1111111111    0  


Q ss_pred             ----------CCCCCCCchhhhhhhhhccceeE
Q 025755          216 ----------FFTTPSHSYMLERTLVLNQGVRL  238 (248)
Q Consensus       216 ----------~l~~~~~~~~~g~~l~vd~g~~~  238 (248)
                                ++..+...|++|+++.+|||...
T Consensus       219 ~~~dva~~~~~l~s~~~~~~tG~~~~vdgG~~~  251 (253)
T 3qiv_A          219 TPDDLVGMCLFLLSDEASWITGQIFNVDGGQII  251 (253)
T ss_dssp             -CCHHHHHHHHHHSGGGTTCCSCEEEC------
T ss_pred             CHHHHHHHHHHHcCccccCCCCCEEEECCCeec
Confidence                      56667778999999999999763

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=99.98  E-value=2.1e-32  Score=230.96  Aligned_cols=222  Identities=22%  Similarity=0.232  Sum_probs=165.3

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHC---C---CeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCE
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLK---G---YMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTG   80 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~---g---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~   80 (248)
                      |+|+||||+||||++++++|+++   |   ++|++++|+........++.+. ...++.++.+|++|.+++.+++.++|+
T Consensus         1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~d~   79 (337)
T 1r6d_A            1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVD-ADPRLRFVHGDIRDAGLLARELRGVDA   79 (337)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGT-TCTTEEEEECCTTCHHHHHHHTTTCCE
T ss_pred             CeEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhhhcc-cCCCeEEEEcCCCCHHHHHHHhcCCCE
Confidence            47999999999999999999997   8   9999999865321112222221 135789999999999999999999999


Q ss_pred             EEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccccc
Q 025755           81 VFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATEN  160 (248)
Q Consensus        81 vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~  160 (248)
                      |||+||..........+..++++|+.++.++++++.+.+.++|||+||.. +|+...   ..+++|+.+..+      .+
T Consensus        80 Vih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~~~~~v~~SS~~-vyg~~~---~~~~~E~~~~~~------~~  149 (337)
T 1r6d_A           80 IVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQ-VYGSID---SGSWTESSPLEP------NS  149 (337)
T ss_dssp             EEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGG-GGCCCS---SSCBCTTSCCCC------CS
T ss_pred             EEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecchH-HhCCCC---CCCCCCCCCCCC------CC
Confidence            99999975432112344678999999999999999999889999999976 444322   356677765443      45


Q ss_pred             hHHHHHHHHHHHHHHHHHhCCccEEEEccCeeecCCCCCCCCccHHHHHHHHcCCCCCCCCCchhhhhhhhhccceeEEE
Q 025755          161 YYCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKGFFFTTPSHSYMLERTLVLNQGVRLYR  240 (248)
Q Consensus       161 ~Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~l~vd~g~~~~~  240 (248)
                      .|+.+|..+|.+++.++.+++++++++||+++|||..... .....++..+..+..+....++....+.+++++...++.
T Consensus       150 ~Y~~sK~~~e~~~~~~~~~~g~~~~ilrp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~  228 (337)
T 1r6d_A          150 PYAASKAGSDLVARAYHRTYGLDVRITRCCNNYGPYQHPE-KLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIA  228 (337)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCTT-SHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHCCCEEEEEeeeeECCCCCCC-ChHHHHHHHHhcCCCcEEeCCCCeeEeeEeHHHHHHHHH
Confidence            6999999999999999887789999999999999986532 344566677776654433333333345566666555443

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=99.98  E-value=6.9e-33  Score=226.18  Aligned_cols=213  Identities=13%  Similarity=0.053  Sum_probs=151.1

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCC-CCCeEEEEccCCCHHHHHHHhC------
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGA-SENLQLFKTDLLDYEALCAATA------   76 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Di~d~~~~~~~~~------   76 (248)
                      |++|+++||||+||||+++++.|+++|++|++++|+.........+.+... ..++.++.+|++|.++++++++      
T Consensus         2 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   81 (260)
T 1x1t_A            2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM   81 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence            678999999999999999999999999999999998643122222222221 3578899999999999888876      


Q ss_pred             -CCCEEEEccccCCCCC----CCCccccchhhhHHHHHHHHHHHHh----cCCCEEEEEeccceeccCCCCCCCCccCCC
Q 025755           77 -GCTGVFHVACPVPVGK----VPNPEVQLIDPAVVGTKNVLNSCVK----AKVKRVVVVSSIGAVMLNPNWPKGQVMDEE  147 (248)
Q Consensus        77 -~id~vi~~ag~~~~~~----~~~~~~~~~~~n~~g~~~~~~~~~~----~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~  147 (248)
                       ++|+||||||......    ..+.|+..+++|+.++.++++++.+    .+.++||++||..++.+.+.          
T Consensus        82 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~----------  151 (260)
T 1x1t_A           82 GRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASAN----------  151 (260)
T ss_dssp             SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT----------
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHhCcCCCC----------
Confidence             6899999999765331    1244567899999999888888754    46689999999877655433          


Q ss_pred             CCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCCCc--------cHHHH-----HHH
Q 025755          148 CWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTINT--------SSLLL-----LGF  211 (248)
Q Consensus       148 ~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~~~--------~~~~~-----~~~  211 (248)
                                 ...|+.||+..+.+.+.++.+   .++++|+|+||++.+|+.......        .....     ...
T Consensus       152 -----------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (260)
T 1x1t_A          152 -----------KSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQ  220 (260)
T ss_dssp             -----------CHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHHHC
T ss_pred             -----------CchHHHHHHHHHHHHHHHHHHhccCCEEEEEEeecCccCchHHHhhhhhccccCCchHHHHHHHhhccC
Confidence                       234999998766666665543   369999999999999975432100        00111     111


Q ss_pred             HcCC------------CCCCCCCchhhhhhhhhcccee
Q 025755          212 LKGF------------FFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       212 ~~~~------------~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                      ..++            ++.++...|++|+++.+|||+.
T Consensus       221 p~~~~~~p~dva~~~~~l~s~~~~~~tG~~~~vdgG~~  258 (260)
T 1x1t_A          221 PSLQFVTPEQLGGTAVFLASDAAAQITGTTVSVDGGWT  258 (260)
T ss_dssp             TTCCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             CCCCCcCHHHHHHHHHHHhChhhcCCCCCEEEECCCcc
Confidence            1111            5666667899999999999964

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=99.98  E-value=1.9e-32  Score=225.53  Aligned_cols=212  Identities=12%  Similarity=0.078  Sum_probs=154.7

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC------
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA------   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~------   76 (248)
                      ++++|+++||||+||||+++++.|+++|++|++++|+.... ....+.+   ..++.++++|++|.++++++++      
T Consensus        24 ~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~-~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   99 (277)
T 4dqx_A           24 DLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAA-VRVANEI---GSKAFGVRVDVSSAKDAESMVEKTTAKW   99 (277)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHH-HHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence            37889999999999999999999999999999999986422 2222222   4578999999999999888876      


Q ss_pred             -CCCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHHh----cCCCEEEEEeccceeccCCCCCCCCccCCC
Q 025755           77 -GCTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCVK----AKVKRVVVVSSIGAVMLNPNWPKGQVMDEE  147 (248)
Q Consensus        77 -~id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~~----~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~  147 (248)
                       ++|+||||||.......    .+.|+..+++|+.|+.++++++.+    .+.++||++||..++.+.+..         
T Consensus       100 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~---------  170 (277)
T 4dqx_A          100 GRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATSAIADR---------  170 (277)
T ss_dssp             SCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGTSCCTTB---------
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhCcCCCCC---------
Confidence             68999999997654322    234567889999999988888754    356799999998876655432         


Q ss_pred             CCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCC---CCccHHHHHHHHcC----C--
Q 025755          148 CWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPT---INTSSLLLLGFLKG----F--  215 (248)
Q Consensus       148 ~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~---~~~~~~~~~~~~~~----~--  215 (248)
                                  ..|+.||++.+.+.+.++.+   .|++||+|+||.+.+|+....   ..........+...    +  
T Consensus       171 ------------~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~  238 (277)
T 4dqx_A          171 ------------TAYVASKGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPYFTKIFAEAKDPAKLRSDFNARAVMDRMG  238 (277)
T ss_dssp             ------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHHTCSCHHHHHHHHHTTSTTCSCB
T ss_pred             ------------hhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCchhhhhcccccchhHHHHHHHhcCcccCCc
Confidence                        34999997555555554433   259999999999999862110   00111111111111    1  


Q ss_pred             ----------CCCCCCCchhhhhhhhhccceeEE
Q 025755          216 ----------FFTTPSHSYMLERTLVLNQGVRLY  239 (248)
Q Consensus       216 ----------~l~~~~~~~~~g~~l~vd~g~~~~  239 (248)
                                ++.++.+.|++|+++.||||..+.
T Consensus       239 ~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~~  272 (277)
T 4dqx_A          239 TAEEIAEAMLFLASDRSRFATGSILTVDGGSSIG  272 (277)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESSSSSSC
T ss_pred             CHHHHHHHHHHHhCCccCCCcCCEEEECCchhhh
Confidence                      677788899999999999998753

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=99.98  E-value=9.6e-32  Score=227.00  Aligned_cols=193  Identities=45%  Similarity=0.788  Sum_probs=146.7

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhh-HHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEE
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKN-AHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVF   82 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi   82 (248)
                      .++|+||||||+||||++++++|+++|++|+++.|+...... ..+..+.....++.++.+|++|.+++.++++++|+||
T Consensus         3 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vi   82 (337)
T 2c29_D            3 SQSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADEGSFDEAIKGCTGVF   82 (337)
T ss_dssp             ---CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHHHHTSTTHHHHEEEEECCTTSTTTTHHHHTTCSEEE
T ss_pred             CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHHHHhcccCCCeEEEEEcCCCCHHHHHHHHcCCCEEE
Confidence            678999999999999999999999999999999998643211 1111111111358899999999999999999999999


Q ss_pred             EccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcC-CCEEEEEeccceeccCCCCCCCCccCCCCCCchhh--h-ccc
Q 025755           83 HVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAK-VKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEF--C-KAT  158 (248)
Q Consensus        83 ~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~-~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~--~-~~~  158 (248)
                      |+|+.... ...++...++++|+.|+.++++++.+.+ .++|||+||..++++.+.  ...+++|+.+...+.  . ..+
T Consensus        83 h~A~~~~~-~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~riV~~SS~~~~~~~~~--~~~~~~E~~~~~~~~~~~~~~~  159 (337)
T 2c29_D           83 HVATPMDF-ESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTVNIQEH--QLPVYDESCWSDMEFCRAKKMT  159 (337)
T ss_dssp             ECCCCCCS-SCSSHHHHTHHHHHHHHHHHHHHHHHHSCCCEEEEECCGGGTSCSSS--CCSEECTTCCCCHHHHHHHCCT
T ss_pred             EeccccCC-CCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEEEeeeHhhcccCCC--CCcccCcccCCchhhhcccCCc
Confidence            99987532 1122334689999999999999999886 899999999876766432  134577776544332  1 123


Q ss_pred             cchHHHHHHHHHHHHHHHHHhCCccEEEEccCeeecCCCCC
Q 025755          159 ENYYCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQP  199 (248)
Q Consensus       159 ~~~Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~  199 (248)
                      .++|+.||.++|.++.+++.+++++++++||+++|||....
T Consensus       160 ~~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~  200 (337)
T 2c29_D          160 AWMYFVSKTLAEQAAWKYAKENNIDFITIIPTLVVGPFIMS  200 (337)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHTCCEEEEEECEEESCCSCS
T ss_pred             cchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCC
Confidence            45799999999999999887667999999999999998654

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=99.98  E-value=2.1e-32  Score=225.22  Aligned_cols=214  Identities=14%  Similarity=0.091  Sum_probs=153.5

Q ss_pred             CCCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-----
Q 025755            2 SGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-----   76 (248)
Q Consensus         2 ~~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-----   76 (248)
                      +++++|+++||||+||||++++++|+++|++|++++|+... .....+.+... +++.++.+|++|.++++++++     
T Consensus        25 ~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~-~~~~~~~l~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~  102 (276)
T 2b4q_A           25 FSLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEA-CADTATRLSAY-GDCQAIPADLSSEAGARRLAQALGEL  102 (276)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHH-HHHHHHHHTTS-SCEEECCCCTTSHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHHHHhc-CceEEEEeeCCCHHHHHHHHHHHHHh
Confidence            34788999999999999999999999999999999998632 22233333332 378899999999999888776     


Q ss_pred             --CCCEEEEccccCCCCC----CCCccccchhhhHHHHHHHHHHHHh----cCC----CEEEEEeccceeccCCCCCCCC
Q 025755           77 --GCTGVFHVACPVPVGK----VPNPEVQLIDPAVVGTKNVLNSCVK----AKV----KRVVVVSSIGAVMLNPNWPKGQ  142 (248)
Q Consensus        77 --~id~vi~~ag~~~~~~----~~~~~~~~~~~n~~g~~~~~~~~~~----~~~----~~iV~vSS~~~~~~~~~~~~~~  142 (248)
                        ++|+||||||......    ..+.|...+++|+.++.++++++.+    .+.    ++||++||..++.+.+...   
T Consensus       103 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~~~~~~~---  179 (276)
T 2b4q_A          103 SARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAMGEQA---  179 (276)
T ss_dssp             CSCCSEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTCCCCCSC---
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcCCCCCCc---
Confidence              6899999999765432    1334567899999999887777653    344    8999999987765544322   


Q ss_pred             ccCCCCCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCCCccHHHHHH---HHcCC-
Q 025755          143 VMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTINTSSLLLLG---FLKGF-  215 (248)
Q Consensus       143 ~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~---~~~~~-  215 (248)
                                       ..|+.||++.+.+.+.++.+   .+++||+|+||.+.+++...........+..   ...++ 
T Consensus       180 -----------------~~Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~  242 (276)
T 2b4q_A          180 -----------------YAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTRHIANDPQALEADSASIPMGRW  242 (276)
T ss_dssp             -----------------TTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTTHHHHHCHHHHHHHHHTSTTSSC
T ss_pred             -----------------cccHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcchhhcchhHHHHHHhhcCCCCCCc
Confidence                             02999998666666655543   2699999999999998753210000011111   11111 


Q ss_pred             -----------CCCCCCCchhhhhhhhhcccee
Q 025755          216 -----------FFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       216 -----------~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                                 ++.++...|++|+++.+|||+.
T Consensus       243 ~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~  275 (276)
T 2b4q_A          243 GRPEEMAALAISLAGTAGAYMTGNVIPIDGGFH  275 (276)
T ss_dssp             CCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred             CCHHHHHHHHHHHhCccccCCCCCEEEeCCCcc
Confidence                       5556667899999999999964

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=99.98  E-value=1.2e-32  Score=224.83  Aligned_cols=214  Identities=16%  Similarity=0.113  Sum_probs=156.7

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHh-------
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAAT-------   75 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~-------   75 (248)
                      ++++|+++||||+||||++++++|+++|++|++++|+.+. .....+.+.....++.++.+|++|.+++++++       
T Consensus         6 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (260)
T 2ae2_A            6 NLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKE-LNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHF   84 (260)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHH-HHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            3778999999999999999999999999999999998642 22223333333457889999999999988887       


Q ss_pred             -CCCCEEEEccccCCCCC----CCCccccchhhhHHHHHHHHHHHH----hcCCCEEEEEeccceeccCCCCCCCCccCC
Q 025755           76 -AGCTGVFHVACPVPVGK----VPNPEVQLIDPAVVGTKNVLNSCV----KAKVKRVVVVSSIGAVMLNPNWPKGQVMDE  146 (248)
Q Consensus        76 -~~id~vi~~ag~~~~~~----~~~~~~~~~~~n~~g~~~~~~~~~----~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e  146 (248)
                       .++|+||||||......    ..+.+..++++|+.++.++++++.    +.+.++||++||..+..+.+.         
T Consensus        85 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---------  155 (260)
T 2ae2_A           85 HGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPY---------  155 (260)
T ss_dssp             TTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCTT---------
T ss_pred             CCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCC---------
Confidence             47999999999764321    123456789999999999988885    446789999999876554432         


Q ss_pred             CCCCchhhhccccchHHHHHHHHHHHHHHHHHhC---CccEEEEccCeeecCCCCCCC--CccHHHHHHHHc----CC--
Q 025755          147 ECWSDEEFCKATENYYCLAKTIAEIQALEYAKRG---ELDIVTVCPSIVIGPMLQPTI--NTSSLLLLGFLK----GF--  215 (248)
Q Consensus       147 ~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~---~i~v~~vrpg~i~g~~~~~~~--~~~~~~~~~~~~----~~--  215 (248)
                                  ...|+.||+..+.+.+.++.+.   +++||+|+||.+++++.....  ......+..+..    ++  
T Consensus       156 ------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (260)
T 2ae2_A          156 ------------EAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMG  223 (260)
T ss_dssp             ------------CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTTCSCB
T ss_pred             ------------cchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCCCCCcchhhhccChhhHHHHHHHHhcCCCCCCC
Confidence                        2349999988777777776554   699999999999998632110  000010001111    11  


Q ss_pred             ----------CCCCCCCchhhhhhhhhccceeE
Q 025755          216 ----------FFTTPSHSYMLERTLVLNQGVRL  238 (248)
Q Consensus       216 ----------~l~~~~~~~~~g~~l~vd~g~~~  238 (248)
                                ++.++...|++|+++.+|||..+
T Consensus       224 ~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG~~~  256 (260)
T 2ae2_A          224 EPKELAAMVAFLCFPAASYVTGQIIYVDGGLMA  256 (260)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             CHHHHHHHHHHHcCccccCCCCCEEEECCCccc
Confidence                      56666678999999999999753

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=99.98  E-value=4.5e-32  Score=232.74  Aligned_cols=230  Identities=15%  Similarity=0.070  Sum_probs=170.1

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEE
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFH   83 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~   83 (248)
                      .+||+|+||||+||||++++++|+++|++|++++|+.......       ...++.++.+|++|.+++.++++++|+|||
T Consensus        27 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-------~~~~v~~~~~Dl~d~~~~~~~~~~~d~Vih   99 (379)
T 2c5a_A           27 SENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTE-------DMFCDEFHLVDLRVMENCLKVTEGVDHVFN   99 (379)
T ss_dssp             TSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCG-------GGTCSEEEECCTTSHHHHHHHHTTCSEEEE
T ss_pred             ccCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhh-------ccCCceEEECCCCCHHHHHHHhCCCCEEEE
Confidence            4678999999999999999999999999999999986432111       124688999999999999999999999999


Q ss_pred             ccccCCCCCC-CCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCC-CCCCccCCCCCCchhhhccccch
Q 025755           84 VACPVPVGKV-PNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNW-PKGQVMDEECWSDEEFCKATENY  161 (248)
Q Consensus        84 ~ag~~~~~~~-~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~  161 (248)
                      +|+....... ...+..++++|+.++.++++++++.+.++|||+||...+...... ....+++|+++.    ...+.+.
T Consensus       100 ~A~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~~V~~SS~~v~~~~~~~~~~~~~~~E~~~~----~~~~~~~  175 (379)
T 2c5a_A          100 LAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAW----PAEPQDA  175 (379)
T ss_dssp             CCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGS----SBCCSSH
T ss_pred             CceecCcccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeehheeCCCCCCCccCCCcCcccCC----CCCCCCh
Confidence            9997543211 345578899999999999999999998999999996643322110 011345555421    2234567


Q ss_pred             HHHHHHHHHHHHHHHHHhCCccEEEEccCeeecCCCCCCC---CccHHHHHHHHcCCC-CCCCCCchhhhhhhhhcccee
Q 025755          162 YCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTI---NTSSLLLLGFLKGFF-FTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       162 Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~---~~~~~~~~~~~~~~~-l~~~~~~~~~g~~l~vd~g~~  237 (248)
                      |+.+|..+|.+++.++.+++++++++||+++|||......   .....++..+..+.. +....++....+.+++++...
T Consensus       176 Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~  255 (379)
T 2c5a_A          176 FGLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVE  255 (379)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHCCCEEEEEeCceeCcCCCcccccccHHHHHHHHHHhCCCceEEeCCCCeeEEEEEHHHHHH
Confidence            9999999999999998877899999999999999865431   245567777766654 333333333446788887766


Q ss_pred             EEEeecc
Q 025755          238 LYRCKIQ  244 (248)
Q Consensus       238 ~~~~~~~  244 (248)
                      ++..++.
T Consensus       256 ai~~~l~  262 (379)
T 2c5a_A          256 GVLRLTK  262 (379)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHhh
Confidence            6555443

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=99.98  E-value=5.7e-33  Score=227.78  Aligned_cols=207  Identities=17%  Similarity=0.134  Sum_probs=155.4

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC------
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA------   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~------   76 (248)
                      .+++|+||||||+||||+++++.|+++|++|++++|+....           ......+++|++|.++++++++      
T Consensus        11 ~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~-----------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   79 (269)
T 3vtz_A           11 EFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSD-----------VNVSDHFKIDVTNEEEVKEAVEKTTKKY   79 (269)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--C-----------TTSSEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhc-----------cCceeEEEecCCCHHHHHHHHHHHHHHc
Confidence            36899999999999999999999999999999999986421           1356788999999999988876      


Q ss_pred             -CCCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHHh----cCCCEEEEEeccceeccCCCCCCCCccCCC
Q 025755           77 -GCTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCVK----AKVKRVVVVSSIGAVMLNPNWPKGQVMDEE  147 (248)
Q Consensus        77 -~id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~~----~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~  147 (248)
                       ++|+||||||.......    .+.|...+++|+.++.++++++.+    .+.++||++||..++.+.+..         
T Consensus        80 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~---------  150 (269)
T 3vtz_A           80 GRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYAATKNA---------  150 (269)
T ss_dssp             SCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCTTC---------
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCCCC---------
Confidence             68999999998654321    234567889999999988888765    467899999998877665432         


Q ss_pred             CCCchhhhccccchHHHHHHHHHHHHHHHHHhC--CccEEEEccCeeecCCCCCC--------CCccHHHHHHH----Hc
Q 025755          148 CWSDEEFCKATENYYCLAKTIAEIQALEYAKRG--ELDIVTVCPSIVIGPMLQPT--------INTSSLLLLGF----LK  213 (248)
Q Consensus       148 ~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~--~i~v~~vrpg~i~g~~~~~~--------~~~~~~~~~~~----~~  213 (248)
                                  ..|+.||++.+.+.+.++.++  +++||+|+||.+++++....        ..........+    ..
T Consensus       151 ------------~~Y~asKaa~~~l~~~la~e~~~~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~  218 (269)
T 3vtz_A          151 ------------AAYVTSKHALLGLTRSVAIDYAPKIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQHPM  218 (269)
T ss_dssp             ------------HHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCHHHHHHHHHHHCCSTTHHHHHHHHHHHHSTT
T ss_pred             ------------hhHHHHHHHHHHHHHHHHHHhcCCCEEEEEEECCCcCcchhhhhhccccccchhhHHHHHHHHhcCCC
Confidence                        339999987777766666543  69999999999999863210        00001111111    11


Q ss_pred             CC------------CCCCCCCchhhhhhhhhccceeEEEe
Q 025755          214 GF------------FFTTPSHSYMLERTLVLNQGVRLYRC  241 (248)
Q Consensus       214 ~~------------~l~~~~~~~~~g~~l~vd~g~~~~~~  241 (248)
                      ++            ++.++.+.|+||+++.||||+.....
T Consensus       219 ~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~~~~  258 (269)
T 3vtz_A          219 GRIGRPEEVAEVVAFLASDRSSFITGACLTVDGGLLSKLP  258 (269)
T ss_dssp             SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGBCC
T ss_pred             CCCcCHHHHHHHHHHHhCCccCCCcCcEEEECCCccccCC
Confidence            11            67778889999999999999876543

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=99.98  E-value=1.8e-32  Score=231.41  Aligned_cols=235  Identities=25%  Similarity=0.336  Sum_probs=169.7

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcC-CCCCeEEE-EccCCCHHHHHHHhCCCCEE
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEG-ASENLQLF-KTDLLDYEALCAATAGCTGV   81 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~-~~Di~d~~~~~~~~~~id~v   81 (248)
                      +++|+||||||+||||++++++|+++|++|++++|+.... ......+.. ...++.++ .+|++|.+++.++++++|+|
T Consensus         9 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v   87 (342)
T 1y1p_A            9 PEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKL-ANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGV   87 (342)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHH-HHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEE
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccH-HHHHHHhhccCCCceEEEEecCCcChHHHHHHHcCCCEE
Confidence            5689999999999999999999999999999999975321 111111110 12568888 89999999999999999999


Q ss_pred             EEccccCCCCCCCCccccchhhhHHHHHHHHHHHHh-cCCCEEEEEeccceeccCCCCCCCCccCCCCCCchhh------
Q 025755           82 FHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVK-AKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEF------  154 (248)
Q Consensus        82 i~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~-~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~------  154 (248)
                      |||||.....   ..+..++++|+.++.++++++.+ .+.++|||+||..+++.........+++|+++.....      
T Consensus        88 ih~A~~~~~~---~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~  164 (342)
T 1y1p_A           88 AHIASVVSFS---NKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTL  164 (342)
T ss_dssp             EECCCCCSCC---SCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHHS
T ss_pred             EEeCCCCCCC---CCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHHHhcCCCCCCCCcccCccccCchhhhhhccc
Confidence            9999976542   34577899999999999999985 5778999999977654321111125778887532211      


Q ss_pred             ----hccccchHHHHHHHHHHHHHHHHHhC--CccEEEEccCeeecCCCCCCC--CccHHHHHHHHcCCCCCCCCCchhh
Q 025755          155 ----CKATENYYCLAKTIAEIQALEYAKRG--ELDIVTVCPSIVIGPMLQPTI--NTSSLLLLGFLKGFFFTTPSHSYML  226 (248)
Q Consensus       155 ----~~~~~~~Y~~sK~~~e~l~~~~~~~~--~i~v~~vrpg~i~g~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~  226 (248)
                          +..+.+.|+.||.++|.+++.++.++  +++++++||+++|||......  .....++..+..+......... ..
T Consensus       165 ~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~  243 (342)
T 1y1p_A          165 PESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALALM-PP  243 (342)
T ss_dssp             CTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHHHTC-CS
T ss_pred             cccccccchHHHHHHHHHHHHHHHHHHHhcCCCceEEEEcCCceECCCCCCCCCCccHHHHHHHHHcCCCccccccC-Cc
Confidence                12345679999999999999998764  699999999999999876532  1456677777776543222111 23


Q ss_pred             hhhhhhccceeEEEeec
Q 025755          227 ERTLVLNQGVRLYRCKI  243 (248)
Q Consensus       227 g~~l~vd~g~~~~~~~~  243 (248)
                      .+.+++++...++..++
T Consensus       244 ~~~v~v~Dva~a~~~~~  260 (342)
T 1y1p_A          244 QYYVSAVDIGLLHLGCL  260 (342)
T ss_dssp             EEEEEHHHHHHHHHHHH
T ss_pred             CCEeEHHHHHHHHHHHH
Confidence            35677777666554443

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=99.98  E-value=1.1e-32  Score=236.42  Aligned_cols=229  Identities=19%  Similarity=0.180  Sum_probs=168.3

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCC-CeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEE
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKG-YMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVF   82 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi   82 (248)
                      ++||+|+||||+|+||++++++|+++| ++|++++|+..... .   .+. ...++.++.+|++|.+++.++++++|+||
T Consensus        30 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~-~---~l~-~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi  104 (377)
T 2q1s_A           30 LANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEK-I---NVP-DHPAVRFSETSITDDALLASLQDEYDYVF  104 (377)
T ss_dssp             GTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCG-G---GSC-CCTTEEEECSCTTCHHHHHHCCSCCSEEE
T ss_pred             hCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCch-h---hcc-CCCceEEEECCCCCHHHHHHHhhCCCEEE
Confidence            567899999999999999999999999 99999999764221 1   111 13578999999999999999999999999


Q ss_pred             EccccCCCCCCCCccccchhhhHHHHHHHHHHHHhc-CCCEEEEEeccceeccCCCCCCCCccC--CCCCCchhhhc-cc
Q 025755           83 HVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKA-KVKRVVVVSSIGAVMLNPNWPKGQVMD--EECWSDEEFCK-AT  158 (248)
Q Consensus        83 ~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~-~~~~iV~vSS~~~~~~~~~~~~~~~~~--e~~~~~~~~~~-~~  158 (248)
                      |+||..........+..++++|+.++.++++++++. +.++|||+||.. +|+...   ..+++  |+.+..   +. .+
T Consensus       105 h~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS~~-vyg~~~---~~~~~~~E~~~~~---~~~~~  177 (377)
T 2q1s_A          105 HLATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAAGC-SIAEKT---FDDAKATEETDIV---SLHNN  177 (377)
T ss_dssp             ECCCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEEC------------------CCCCCC---CSSCC
T ss_pred             ECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCCHH-HcCCCC---CCCcCcccccccc---cccCC
Confidence            999975432112344678999999999999999998 889999999965 454422   34566  665210   11 23


Q ss_pred             cchHHHHHHHHHHHHHHHHHhCCccEEEEccCeeecCCC---------CCC---CCccHHHHHHHHcCCCCCCCCCchhh
Q 025755          159 ENYYCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPML---------QPT---INTSSLLLLGFLKGFFFTTPSHSYML  226 (248)
Q Consensus       159 ~~~Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~---------~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~  226 (248)
                      .++|+.+|..+|.++..++.+++++++++||+++|||..         .+.   ......++..+..+..+....++...
T Consensus       178 ~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~  257 (377)
T 2q1s_A          178 DSPYSMSKIFGEFYSVYYHKQHQLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMPLPLENGGVAT  257 (377)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHHHHHHHHHTTCCCCCSGGGCCE
T ss_pred             CCchHHHHHHHHHHHHHHHHHhCCCEEEEeeccEECCCCcccccccccCcccccccHHHHHHHHHHcCCCeEEeCCCCeE
Confidence            466999999999999999877789999999999999986         221   23456677777777765555454455


Q ss_pred             hhhhhhccceeE-EEeecc
Q 025755          227 ERTLVLNQGVRL-YRCKIQ  244 (248)
Q Consensus       227 g~~l~vd~g~~~-~~~~~~  244 (248)
                      .+.+++|+...+ +..++.
T Consensus       258 ~~~i~v~Dva~a~i~~~~~  276 (377)
T 2q1s_A          258 RDFIFVEDVANGLIACAAD  276 (377)
T ss_dssp             ECCEEHHHHHHHHHHHHHH
T ss_pred             EeeEEHHHHHHHHHHHHHh
Confidence            567888887776 555443

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=99.98  E-value=5.6e-33  Score=232.05  Aligned_cols=218  Identities=23%  Similarity=0.263  Sum_probs=162.8

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC--CCCEEEEc
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA--GCTGVFHV   84 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~--~id~vi~~   84 (248)
                      |+||||||+||||++++++|+++|++|++++|...... .   .+   ..++.++.+|++|.+++.++++  ++|+|||+
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~-~---~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~   73 (311)
T 2p5y_A            1 MRVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKR-E---NV---PKGVPFFRVDLRDKEGVERAFREFRPTHVSHQ   73 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCG-G---GS---CTTCCEECCCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCch-h---hc---ccCeEEEECCCCCHHHHHHHHHhcCCCEEEEC
Confidence            37999999999999999999999999999988543211 1   11   1357788999999999999988  89999999


Q ss_pred             cccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccC-CCCCCCCccCCCCCCchhhhccccchHH
Q 025755           85 ACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLN-PNWPKGQVMDEECWSDEEFCKATENYYC  163 (248)
Q Consensus        85 ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~-~~~~~~~~~~e~~~~~~~~~~~~~~~Y~  163 (248)
                      |+..........+...+++|+.++.++++++++.+.++||++||.+.+|+. ..   ..+++|+.+..+      .+.|+
T Consensus        74 a~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~~g~~~~---~~~~~E~~~~~~------~~~Y~  144 (311)
T 2p5y_A           74 AAQASVKVSVEDPVLDFEVNLLGGLNLLEACRQYGVEKLVFASTGGAIYGEVPE---GERAEETWPPRP------KSPYA  144 (311)
T ss_dssp             CSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEHHHHHCCCCT---TCCBCTTSCCCC------CSHHH
T ss_pred             ccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCChhhcCCCCC---CCCcCCCCCCCC------CChHH
Confidence            997543211234467899999999999999999888999999997455654 21   346677765443      45699


Q ss_pred             HHHHHHHHHHHHHHHhCCccEEEEccCeeecCCCCCCC--CccHHHHHHHHcCCCCCCC-----CCchhhhhhhhhccce
Q 025755          164 LAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTI--NTSSLLLLGFLKGFFFTTP-----SHSYMLERTLVLNQGV  236 (248)
Q Consensus       164 ~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~--~~~~~~~~~~~~~~~l~~~-----~~~~~~g~~l~vd~g~  236 (248)
                      .||.++|.+++.++.+++++++++||+++|||.+....  .....++..+..+..+...     .++....+.+++++..
T Consensus       145 ~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva  224 (311)
T 2p5y_A          145 ASKAAFEHYLSVYGQSYGLKWVSLRYGNVYGPRQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEGCVRDYVYVGDVA  224 (311)
T ss_dssp             HHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCSSSTTHHHHHHHHHHHHTCCEEEECSSSTTSCCCEECEEEHHHHH
T ss_pred             HHHHHHHHHHHHHHHHcCCCEEEEeeccccCcCCCCCCcCcHHHHHHHHHHcCCCcEEEecccCCCCCeEEeeEEHHHHH
Confidence            99999999999998777899999999999999865431  2345566666666543322     3333344567777765


Q ss_pred             eEEE
Q 025755          237 RLYR  240 (248)
Q Consensus       237 ~~~~  240 (248)
                      .++.
T Consensus       225 ~a~~  228 (311)
T 2p5y_A          225 EAHA  228 (311)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            5443

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=99.98  E-value=1.2e-32  Score=224.68  Aligned_cols=207  Identities=16%  Similarity=0.143  Sum_probs=145.0

Q ss_pred             CCCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-----
Q 025755            2 SGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-----   76 (248)
Q Consensus         2 ~~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-----   76 (248)
                      +++++|++|||||+||||+++++.|+++|++|++++|+..+.. ..+..     .++.++.+|++|.++++++++     
T Consensus        23 m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~-~~~~~-----~~~~~~~~Dv~~~~~v~~~~~~~~~~   96 (260)
T 3gem_A           23 MTLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASV-TELRQ-----AGAVALYGDFSCETGIMAFIDLLKTQ   96 (260)
T ss_dssp             ----CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHH-HHHHH-----HTCEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHH-HHHHh-----cCCeEEECCCCCHHHHHHHHHHHHHh
Confidence            4578999999999999999999999999999999999875332 22222     137889999999999888875     


Q ss_pred             --CCCEEEEccccCCCCCC---CCccccchhhhHHHHHHHHHHHHh----cCCCEEEEEeccceeccCCCCCCCCccCCC
Q 025755           77 --GCTGVFHVACPVPVGKV---PNPEVQLIDPAVVGTKNVLNSCVK----AKVKRVVVVSSIGAVMLNPNWPKGQVMDEE  147 (248)
Q Consensus        77 --~id~vi~~ag~~~~~~~---~~~~~~~~~~n~~g~~~~~~~~~~----~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~  147 (248)
                        ++|+||||||.......   .+.|...+++|+.++.++++++.+    .+.++||++||..+..+.+..         
T Consensus        97 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~---------  167 (260)
T 3gem_A           97 TSSLRAVVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRKGSSKH---------  167 (260)
T ss_dssp             CSCCSEEEECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGTCCSSC---------
T ss_pred             cCCCCEEEECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCCCc---------
Confidence              68999999997654322   233457899999999998888765    356899999998877665432         


Q ss_pred             CCCchhhhccccchHHHHHHHHHHHHHHHHHhC--CccEEEEccCeeecCCCCCCCCccHHHHHHHHcCC----------
Q 025755          148 CWSDEEFCKATENYYCLAKTIAEIQALEYAKRG--ELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKGF----------  215 (248)
Q Consensus       148 ~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~--~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~~~----------  215 (248)
                                  ..|+.||++.+.+.+.++.++  +++||+|+||.+.+++.... ............++          
T Consensus       168 ------------~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~t~~~~~~-~~~~~~~~~~p~~r~~~~edva~~  234 (260)
T 3gem_A          168 ------------IAYCATKAGLESLTLSFAARFAPLVKVNGIAPALLMFQPKDDA-AYRANALAKSALGIEPGAEVIYQS  234 (260)
T ss_dssp             ------------HHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECTTCC----------------CCSCCCCCTHHHHHH
T ss_pred             ------------HhHHHHHHHHHHHHHHHHHHHCCCCEEEEEeecccccCCCCCH-HHHHHHHhcCCCCCCCCHHHHHHH
Confidence                        339999986666655555432  49999999999999864321 00111111111111          


Q ss_pred             --CCCCCCCchhhhhhhhhccceeE
Q 025755          216 --FFTTPSHSYMLERTLVLNQGVRL  238 (248)
Q Consensus       216 --~l~~~~~~~~~g~~l~vd~g~~~  238 (248)
                        ++.  .+.|++|+++.||||..+
T Consensus       235 v~~L~--~~~~itG~~i~vdGG~~~  257 (260)
T 3gem_A          235 LRYLL--DSTYVTGTTLTVNGGRHV  257 (260)
T ss_dssp             HHHHH--HCSSCCSCEEEESTTTTT
T ss_pred             HHHHh--hCCCCCCCEEEECCCccc
Confidence              333  468999999999999764

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=99.98  E-value=3.4e-32  Score=224.98  Aligned_cols=212  Identities=16%  Similarity=0.099  Sum_probs=154.9

Q ss_pred             CCCCcEEEEEcCc--cHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC----
Q 025755            3 GEDKERVCVTGAG--GYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA----   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~--g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~----   76 (248)
                      .+++|+++||||+  ||||+++++.|+++|++|++++|+..  .....+.+....+++.++.+|++|.++++++++    
T Consensus        18 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~--~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   95 (285)
T 2p91_A           18 LLEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPK--LEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEE   95 (285)
T ss_dssp             TTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGG--GHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHH--HHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHH
Confidence            3788999999999  99999999999999999999999863  222223222212347789999999999888875    


Q ss_pred             ---CCCEEEEccccCCC----C----CCCCccccchhhhHHHHHHHHHHHHhc---CCCEEEEEeccceeccCCCCCCCC
Q 025755           77 ---GCTGVFHVACPVPV----G----KVPNPEVQLIDPAVVGTKNVLNSCVKA---KVKRVVVVSSIGAVMLNPNWPKGQ  142 (248)
Q Consensus        77 ---~id~vi~~ag~~~~----~----~~~~~~~~~~~~n~~g~~~~~~~~~~~---~~~~iV~vSS~~~~~~~~~~~~~~  142 (248)
                         ++|+||||||....    .    ...+.+...+++|+.|+.++++++.+.   +.++||++||..+..+.+..    
T Consensus        96 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~----  171 (285)
T 2p91_A           96 NWGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGRNGAIVTLSYYGAEKVVPHY----  171 (285)
T ss_dssp             HTSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTSCCEEEEEECGGGTSBCTTT----
T ss_pred             HcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCEEEEEccchhccCCCCc----
Confidence               68999999997643    1    122345678999999999999999875   23799999997766554432    


Q ss_pred             ccCCCCCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCCCccHHHHHHH----HcCC
Q 025755          143 VMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTINTSSLLLLGF----LKGF  215 (248)
Q Consensus       143 ~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~----~~~~  215 (248)
                                       ..|+.||++.+.+.+.++.+   .|++||+|+||.++||+..... ........+    ..++
T Consensus       172 -----------------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~-~~~~~~~~~~~~~p~~~  233 (285)
T 2p91_A          172 -----------------NVMGIAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYSIT-GFHLLMEHTTKVNPFGK  233 (285)
T ss_dssp             -----------------THHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC--CT-THHHHHHHHHHHSTTSS
T ss_pred             -----------------cHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhccc-chHHHHHHHHhcCCCCC
Confidence                             23999998766666665543   3699999999999999764321 111111111    1111


Q ss_pred             ------------CCCCCCCchhhhhhhhhccceeE
Q 025755          216 ------------FFTTPSHSYMLERTLVLNQGVRL  238 (248)
Q Consensus       216 ------------~l~~~~~~~~~g~~l~vd~g~~~  238 (248)
                                  ++.++...+++|+++.+|||+..
T Consensus       234 ~~~~~dva~~~~~l~s~~~~~~tG~~~~vdgg~~~  268 (285)
T 2p91_A          234 PITIEDVGDTAVFLCSDWARAITGEVVHVDNGYHI  268 (285)
T ss_dssp             CCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGG
T ss_pred             CcCHHHHHHHHHHHcCCcccCCCCCEEEECCCccc
Confidence                        56666678999999999999764

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=99.98  E-value=2.2e-32  Score=222.29  Aligned_cols=215  Identities=13%  Similarity=0.136  Sum_probs=159.6

Q ss_pred             CCCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCC----
Q 025755            2 SGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAG----   77 (248)
Q Consensus         2 ~~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~----   77 (248)
                      .++++|+++||||++|||++++++|+++|++|++++++..+........+.....++.++.+|++|.++++++++.    
T Consensus         3 ~~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   82 (255)
T 3icc_A            3 SMLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNE   82 (255)
T ss_dssp             CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CccCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHH
Confidence            3478999999999999999999999999999998765544444444444544566789999999999988887652    


Q ss_pred             ---------CCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHHhc--CCCEEEEEeccceeccCCCCCCCC
Q 025755           78 ---------CTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCVKA--KVKRVVVVSSIGAVMLNPNWPKGQ  142 (248)
Q Consensus        78 ---------id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~~~--~~~~iV~vSS~~~~~~~~~~~~~~  142 (248)
                               +|+||||||.......    .+.++..+++|+.++.++++++.+.  +.++||++||..+..+.+..    
T Consensus        83 ~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~~~----  158 (255)
T 3icc_A           83 LQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISLPDF----  158 (255)
T ss_dssp             HHHHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGTSCCTTB----
T ss_pred             hcccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCChhhccCCCCc----
Confidence                     8999999998654321    2334678899999999999999876  45799999998876665432    


Q ss_pred             ccCCCCCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCCCcc--HHHHHHH-HcC--
Q 025755          143 VMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTINTS--SLLLLGF-LKG--  214 (248)
Q Consensus       143 ~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~~~~--~~~~~~~-~~~--  214 (248)
                                       ..|+.||++.+.+.+.++.+   .++++++|+||.+.+++........  ....... ..+  
T Consensus       159 -----------------~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~  221 (255)
T 3icc_A          159 -----------------IAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAELLSDPMMKQYATTISAFNRL  221 (255)
T ss_dssp             -----------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSSTTTTTSHHHHHHHHHTSTTSSC
T ss_pred             -----------------chhHHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchhhhcccHHHHHhhhccCCcCCC
Confidence                             33999997666655555543   2599999999999999865432111  1111110 001  


Q ss_pred             ----------CCCCCCCCchhhhhhhhhcccee
Q 025755          215 ----------FFFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       215 ----------~~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                                .++.++...+++|+++.||||+.
T Consensus       222 ~~~~dva~~~~~l~s~~~~~~tG~~i~vdgG~~  254 (255)
T 3icc_A          222 GEVEDIADTAAFLASPDSRWVTGQLIDVSGGSC  254 (255)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESSSTT
T ss_pred             CCHHHHHHHHHHHhCcccCCccCCEEEecCCee
Confidence                      16777788999999999999975

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=99.98  E-value=1.7e-32  Score=229.90  Aligned_cols=217  Identities=18%  Similarity=0.174  Sum_probs=161.3

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCC--CCEEE
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAG--CTGVF   82 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~--id~vi   82 (248)
                      ++|+||||||+||||++++++|+++|++|++++|+... . .    +     ++.++.+|++|.+++.+++++  +|+||
T Consensus        11 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~-~----l-----~~~~~~~Dl~d~~~~~~~~~~~~~d~vi   79 (321)
T 2pk3_A           11 GSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-K-L----P-----NVEMISLDIMDSQRVKKVISDIKPDYIF   79 (321)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-C-C----T-----TEEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred             CcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-c-c----c-----eeeEEECCCCCHHHHHHHHHhcCCCEEE
Confidence            56899999999999999999999999999999998642 1 1    1     688999999999999999886  99999


Q ss_pred             EccccCCCCCCCCccccchhhhHHHHHHHHHHHHhc-CCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccccch
Q 025755           83 HVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKA-KVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENY  161 (248)
Q Consensus        83 ~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~-~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~  161 (248)
                      ||||..........+..++++|+.++.++++++.+. +.++|||+||... ++... ....+++|+++..+      .+.
T Consensus        80 h~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~v-~g~~~-~~~~~~~E~~~~~~------~~~  151 (321)
T 2pk3_A           80 HLAAKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILTIGSSEE-YGMIL-PEESPVSEENQLRP------MSP  151 (321)
T ss_dssp             ECCSCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEEGGG-TBSCC-GGGCSBCTTSCCBC------CSH
T ss_pred             EcCcccchhhhhhcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEccHHh-cCCCC-CCCCCCCCCCCCCC------CCc
Confidence            999976533223456789999999999999999776 5899999999764 44320 01456777776543      456


Q ss_pred             HHHHHHHHHHHHHHHHHhCCccEEEEccCeeecCCCCCCCCccHHHHHHHHc---C--CCCCCCCCchhhhhhhhhccce
Q 025755          162 YCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLK---G--FFFTTPSHSYMLERTLVLNQGV  236 (248)
Q Consensus       162 Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~---~--~~l~~~~~~~~~g~~l~vd~g~  236 (248)
                      |+.+|..+|.+++.++.+++++++++||+++|||..... .....++..+..   +  ..+....++....+.+++++..
T Consensus       152 Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~v~Dva  230 (321)
T 2pk3_A          152 YGVSKASVGMLARQYVKAYGMDIIHTRTFNHIGPGQSLG-FVTQDFAKQIVDIEMEKQEPIIKVGNLEAVRDFTDVRDIV  230 (321)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCTT-SHHHHHHHHHHHHHTTSSCSEEEESCSSCEEEEEEHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHcCCCEEEEEeCcccCcCCCCC-chHHHHHHHHHHHhcCCCCCeEEeCCCCcEEeeEEHHHHH
Confidence            999999999999999887789999999999999987642 234455555554   5  2222222222233456666655


Q ss_pred             eEEEe
Q 025755          237 RLYRC  241 (248)
Q Consensus       237 ~~~~~  241 (248)
                      .++..
T Consensus       231 ~a~~~  235 (321)
T 2pk3_A          231 QAYWL  235 (321)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            54433

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=99.98  E-value=3.2e-32  Score=222.19  Aligned_cols=213  Identities=18%  Similarity=0.144  Sum_probs=154.3

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC------
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA------   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~------   76 (248)
                      .+++|+++||||+||||+++++.|+++|++|++++|+.+. .....+.+.....++.++.+|++|.++++++++      
T Consensus        11 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   89 (260)
T 2zat_A           11 PLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQEN-VDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLH   89 (260)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHH-HHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            3678999999999999999999999999999999998642 222233333334578899999999999888776      


Q ss_pred             -CCCEEEEccccCCC-C----CCCCccccchhhhHHHHHHHHHHHH----hcCCCEEEEEeccceeccCCCCCCCCccCC
Q 025755           77 -GCTGVFHVACPVPV-G----KVPNPEVQLIDPAVVGTKNVLNSCV----KAKVKRVVVVSSIGAVMLNPNWPKGQVMDE  146 (248)
Q Consensus        77 -~id~vi~~ag~~~~-~----~~~~~~~~~~~~n~~g~~~~~~~~~----~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e  146 (248)
                       ++|+||||||.... .    ...+.|...+++|+.++.++++++.    +.+.++||++||..++.+.+.         
T Consensus        90 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---------  160 (260)
T 2zat_A           90 GGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFPN---------  160 (260)
T ss_dssp             SCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTT---------
T ss_pred             CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhhcCCCCC---------
Confidence             79999999997532 1    1123456789999999988888875    446789999999876654432         


Q ss_pred             CCCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCC--CCccHHHHHH-HHcCC-----
Q 025755          147 ECWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPT--INTSSLLLLG-FLKGF-----  215 (248)
Q Consensus       147 ~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~--~~~~~~~~~~-~~~~~-----  215 (248)
                                  ...|+.||+..+.+.+.++.+   .++++|+|+||.+.+++....  .......+.. ...++     
T Consensus       161 ------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (260)
T 2zat_A          161 ------------LGPYNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQVLWMDKARKEYMKESLRIRRLGNPE  228 (260)
T ss_dssp             ------------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSTTHHHHSSHHHHHHHHHHHTCSSCBCGG
T ss_pred             ------------chhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcccCccchhcccChHHHHHHHhcCCCCCCCCHH
Confidence                        234999998666666555543   269999999999999875321  0000011111 11121     


Q ss_pred             -------CCCCCCCchhhhhhhhhcccee
Q 025755          216 -------FFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       216 -------~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                             ++.++...|++|+++.+|||..
T Consensus       229 dva~~v~~l~s~~~~~~tG~~~~vdgG~~  257 (260)
T 2zat_A          229 DCAGIVSFLCSEDASYITGETVVVGGGTA  257 (260)
T ss_dssp             GGHHHHHHHTSGGGTTCCSCEEEESTTCC
T ss_pred             HHHHHHHHHcCcccCCccCCEEEECCCcc
Confidence                   5666667899999999999964

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.98  E-value=1.2e-32  Score=224.20  Aligned_cols=211  Identities=15%  Similarity=0.123  Sum_probs=155.3

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-------
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-------   76 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-------   76 (248)
                      +++|++|||||+||||++++++|+++|++|++.++..........+.+.....++.++.+|++|.++++++++       
T Consensus        11 ~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   90 (256)
T 3ezl_A           11 MSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKAEVG   90 (256)
T ss_dssp             --CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHHhcC
Confidence            5789999999999999999999999999999988444333334444444445689999999999999888876       


Q ss_pred             CCCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHH----hcCCCEEEEEeccceeccCCCCCCCCccCCCC
Q 025755           77 GCTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCV----KAKVKRVVVVSSIGAVMLNPNWPKGQVMDEEC  148 (248)
Q Consensus        77 ~id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~----~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~  148 (248)
                      ++|+||||||.......    .+.++..+++|+.++.++++++.    +.+.++||++||..+..+.+..          
T Consensus        91 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~----------  160 (256)
T 3ezl_A           91 EIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQ----------  160 (256)
T ss_dssp             CEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGGSCSCC----------
T ss_pred             CCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhccCCCCC----------
Confidence            68999999998754322    23456789999999888877764    4467899999998877765432          


Q ss_pred             CCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCCCccHHHHHHHH----cCC------
Q 025755          149 WSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTINTSSLLLLGFL----KGF------  215 (248)
Q Consensus       149 ~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~----~~~------  215 (248)
                                 ..|+.||++.+.+.+.++.+   .++++++|+||.+.+++.....   +.....+.    .++      
T Consensus       161 -----------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~---~~~~~~~~~~~~~~~~~~~~d  226 (256)
T 3ezl_A          161 -----------TNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIR---PDVLEKIVATIPVRRLGSPDE  226 (256)
T ss_dssp             -----------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSC---HHHHHHHHHHSTTSSCBCHHH
T ss_pred             -----------cccHHHHHHHHHHHHHHHHHHHHhCCEEEEEEECcccCccccccC---HHHHHHHHhcCCCCCCcCHHH
Confidence                       33999998555555444433   3599999999999998754321   12222111    111      


Q ss_pred             ------CCCCCCCchhhhhhhhhccceeE
Q 025755          216 ------FFTTPSHSYMLERTLVLNQGVRL  238 (248)
Q Consensus       216 ------~l~~~~~~~~~g~~l~vd~g~~~  238 (248)
                            ++.++...+++|+++.+|||..+
T Consensus       227 va~~~~~l~s~~~~~~tG~~i~vdgG~~~  255 (256)
T 3ezl_A          227 IGSIVAWLASEESGFSTGADFSLNGGLHM  255 (256)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESTTSCC
T ss_pred             HHHHHHHHhCCcccCCcCcEEEECCCEeC
Confidence                  66777789999999999999864

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=99.98  E-value=1.5e-32  Score=224.77  Aligned_cols=211  Identities=14%  Similarity=0.095  Sum_probs=155.9

Q ss_pred             CCCcEEEEEcCc--cHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-----
Q 025755            4 EDKERVCVTGAG--GYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-----   76 (248)
Q Consensus         4 l~~k~vlVtG~~--g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-----   76 (248)
                      +++|+++||||+  ||||+++++.|+++|++|++++|+. . .....+.+....+...++.+|++|.++++++++     
T Consensus         7 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~-~-~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   84 (265)
T 1qsg_A            7 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-K-LKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKV   84 (265)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESST-T-THHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTT
T ss_pred             cCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH-H-HHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHH
Confidence            788999999999  9999999999999999999999986 2 222222222212334788999999999988876     


Q ss_pred             --CCCEEEEccccCCC----C-----CCCCccccchhhhHHHHHHHHHHHHhc--CCCEEEEEeccceeccCCCCCCCCc
Q 025755           77 --GCTGVFHVACPVPV----G-----KVPNPEVQLIDPAVVGTKNVLNSCVKA--KVKRVVVVSSIGAVMLNPNWPKGQV  143 (248)
Q Consensus        77 --~id~vi~~ag~~~~----~-----~~~~~~~~~~~~n~~g~~~~~~~~~~~--~~~~iV~vSS~~~~~~~~~~~~~~~  143 (248)
                        ++|+||||||....    .     ...+.+...+++|+.++.++++++.+.  +.++||++||..++.+.+...    
T Consensus        85 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~----  160 (265)
T 1qsg_A           85 WPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYN----  160 (265)
T ss_dssp             CSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTTT----
T ss_pred             cCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEcchhhccCCCCch----
Confidence              68999999997642    1     123445678999999999999999876  236999999987766554322    


Q ss_pred             cCCCCCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCCCccHHHHHHHH----cCC-
Q 025755          144 MDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTINTSSLLLLGFL----KGF-  215 (248)
Q Consensus       144 ~~e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~----~~~-  215 (248)
                                       .|+.||++.+.+.+.++.+   .+++|++|+||+++||+..... ........+.    .++ 
T Consensus       161 -----------------~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~-~~~~~~~~~~~~~p~~~~  222 (265)
T 1qsg_A          161 -----------------VMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIK-DFRKMLAHCEAVTPIRRT  222 (265)
T ss_dssp             -----------------HHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGST-THHHHHHHHHHHSTTSSC
T ss_pred             -----------------HHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhhccc-ccHHHHHHHHhcCCCCCC
Confidence                             3999998777777766654   2699999999999999754321 1111111111    111 


Q ss_pred             -----------CCCCCCCchhhhhhhhhccceeE
Q 025755          216 -----------FFTTPSHSYMLERTLVLNQGVRL  238 (248)
Q Consensus       216 -----------~l~~~~~~~~~g~~l~vd~g~~~  238 (248)
                                 ++.++...+++|+++.+|||...
T Consensus       223 ~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~~  256 (265)
T 1qsg_A          223 VTIEDVGNSAAFLCSDLSAGISGEVVHVDGGFSI  256 (265)
T ss_dssp             CCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGG
T ss_pred             CCHHHHHHHHHHHhCchhcCccCCEEEECCCcCC
Confidence                       56666678999999999999764

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=99.98  E-value=2.3e-32  Score=229.79  Aligned_cols=218  Identities=15%  Similarity=0.061  Sum_probs=158.7

Q ss_pred             CCCCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCC---------CchhhHHhhhhcCCCCCeEEEEccCCCHHHH
Q 025755            1 MSGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDP---------CDEKNAHLKKLEGASENLQLFKTDLLDYEAL   71 (248)
Q Consensus         1 m~~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~---------~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~   71 (248)
                      |..+++|++|||||+||||+++++.|+++|++|++++|+.         .+......+.+.....++.++.+|++|.+++
T Consensus        22 m~~l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v  101 (322)
T 3qlj_A           22 MGVVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQA  101 (322)
T ss_dssp             CCTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHH
T ss_pred             hcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHH
Confidence            4457899999999999999999999999999999999872         1223333344444456789999999999998


Q ss_pred             HHHhC-------CCCEEEEccccCCCCC----CCCccccchhhhHHHHHHHHHHHHhc----C------CCEEEEEeccc
Q 025755           72 CAATA-------GCTGVFHVACPVPVGK----VPNPEVQLIDPAVVGTKNVLNSCVKA----K------VKRVVVVSSIG  130 (248)
Q Consensus        72 ~~~~~-------~id~vi~~ag~~~~~~----~~~~~~~~~~~n~~g~~~~~~~~~~~----~------~~~iV~vSS~~  130 (248)
                      +++++       ++|+||||||......    ..+.|...+++|+.++.++++++.+.    +      .++||++||..
T Consensus       102 ~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS~~  181 (322)
T 3qlj_A          102 AGLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGA  181 (322)
T ss_dssp             HHHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECCHH
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcCHH
Confidence            88876       7899999999876432    13445778999999999999887543    1      26999999988


Q ss_pred             eeccCCCCCCCCccCCCCCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCCCcc-HH
Q 025755          131 AVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTINTS-SL  206 (248)
Q Consensus       131 ~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~~~~-~~  206 (248)
                      ++.+.+..                     ..|+.||++.+.+.+.++.+   .||+||+|+|| +.+++........ ..
T Consensus       182 ~~~~~~~~---------------------~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~~~~~~~~~~~~~  239 (322)
T 3qlj_A          182 GLQGSVGQ---------------------GNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRMTETVFAEMMAT  239 (322)
T ss_dssp             HHHCBTTC---------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSCCSCCSCCC----
T ss_pred             HccCCCCC---------------------ccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCccchhhhhhhhhc
Confidence            77766543                     23999997555555555443   35999999999 8887754321110 00


Q ss_pred             HHHHHHcC---------CCCCCCCCchhhhhhhhhccceeEEE
Q 025755          207 LLLGFLKG---------FFFTTPSHSYMLERTLVLNQGVRLYR  240 (248)
Q Consensus       207 ~~~~~~~~---------~~l~~~~~~~~~g~~l~vd~g~~~~~  240 (248)
                      ........         .++.++...|+||+++.||||.....
T Consensus       240 ~~~~~~~~~pedva~~v~~L~s~~~~~itG~~i~vdGG~~~~~  282 (322)
T 3qlj_A          240 QDQDFDAMAPENVSPLVVWLGSAEARDVTGKVFEVEGGKIRVA  282 (322)
T ss_dssp             ----CCTTCGGGTHHHHHHHTSGGGGGCCSCEEEEETTEEEEE
T ss_pred             cccccCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCccccC
Confidence            00000000         17778888999999999999987654

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=99.98  E-value=2.1e-32  Score=232.84  Aligned_cols=227  Identities=20%  Similarity=0.119  Sum_probs=168.2

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCC--CCEE
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAG--CTGV   81 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~--id~v   81 (248)
                      +++|+|+||||+||||++++++|+++|++|++++|+...... ....+. ...++.++.+|++|.+++.+++++  +|+|
T Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~v   84 (357)
T 1rkx_A            7 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPS-LFETAR-VADGMQSEIGDIRDQNKLLESIREFQPEIV   84 (357)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSC-HHHHTT-TTTTSEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred             hCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccch-hhHhhc-cCCceEEEEccccCHHHHHHHHHhcCCCEE
Confidence            467899999999999999999999999999999997643221 111111 235789999999999999999886  8999


Q ss_pred             EEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcC-CCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccccc
Q 025755           82 FHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAK-VKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATEN  160 (248)
Q Consensus        82 i~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~-~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~  160 (248)
                      ||+||..........+..++++|+.++.++++++.+.+ .++|||+||... |+...  ...+++|+++..      +.+
T Consensus        85 ih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~v-yg~~~--~~~~~~E~~~~~------~~~  155 (357)
T 1rkx_A           85 FHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKC-YDNKE--WIWGYRENEAMG------GYD  155 (357)
T ss_dssp             EECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGG-BCCCC--SSSCBCTTSCBC------CSS
T ss_pred             EECCCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecCHHH-hCCCC--cCCCCCCCCCCC------CCC
Confidence            99999632211123446789999999999999999886 789999999764 44321  123566665543      345


Q ss_pred             hHHHHHHHHHHHHHHHHHhC---------CccEEEEccCeeecCCCCCCCCccHHHHHHHHcCCCCCCCCCchhhhhhhh
Q 025755          161 YYCLAKTIAEIQALEYAKRG---------ELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKGFFFTTPSHSYMLERTLV  231 (248)
Q Consensus       161 ~Y~~sK~~~e~l~~~~~~~~---------~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~l~  231 (248)
                      .|+.+|..+|.+++.++.++         +++++++||+++|||...........++..+..+..+.... +....+.++
T Consensus       156 ~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~v~  234 (357)
T 1rkx_A          156 PYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRN-PHAIRPWQH  234 (357)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEECSC-TTCEECCEE
T ss_pred             ccHHHHHHHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCCCccccHHHHHHHHHhcCCCEEECC-CCCeeccEe
Confidence            69999999999999987653         79999999999999986543345667777777777554432 223345677


Q ss_pred             hccceeEEEee
Q 025755          232 LNQGVRLYRCK  242 (248)
Q Consensus       232 vd~g~~~~~~~  242 (248)
                      +++...++..+
T Consensus       235 v~Dva~a~~~~  245 (357)
T 1rkx_A          235 VLEPLSGYLLL  245 (357)
T ss_dssp             THHHHHHHHHH
T ss_pred             HHHHHHHHHHH
Confidence            77766554433

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=99.98  E-value=8.1e-33  Score=226.62  Aligned_cols=213  Identities=15%  Similarity=0.093  Sum_probs=151.9

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCC--CCCeEEEEccCCCHHHHHHHhC----
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGA--SENLQLFKTDLLDYEALCAATA----   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Di~d~~~~~~~~~----   76 (248)
                      ++++|+++||||+||||+++++.|+++|++|++++|+.+.. ....+.+...  ..++.++.+|++|.++++++++    
T Consensus        10 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   88 (267)
T 1iy8_A           10 RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGL-EASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTE   88 (267)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            47889999999999999999999999999999999986422 2222222221  4578999999999999988876    


Q ss_pred             ---CCCEEEEccccCCC-CC----CCCccccchhhhHHHHHHHHHHH----HhcCCCEEEEEeccceeccCCCCCCCCcc
Q 025755           77 ---GCTGVFHVACPVPV-GK----VPNPEVQLIDPAVVGTKNVLNSC----VKAKVKRVVVVSSIGAVMLNPNWPKGQVM  144 (248)
Q Consensus        77 ---~id~vi~~ag~~~~-~~----~~~~~~~~~~~n~~g~~~~~~~~----~~~~~~~iV~vSS~~~~~~~~~~~~~~~~  144 (248)
                         ++|+||||||.... ..    ..+.|+..+++|+.++.++++++    ++.+.++||++||..+..+.+.       
T Consensus        89 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-------  161 (267)
T 1iy8_A           89 RFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGN-------  161 (267)
T ss_dssp             HHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCSS-------
T ss_pred             HcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhccCCCC-------
Confidence               68999999997643 21    12445678999999987665555    4456789999999877655432       


Q ss_pred             CCCCCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCC-----CCCccHHHHHHHHc---
Q 025755          145 DEECWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQP-----TINTSSLLLLGFLK---  213 (248)
Q Consensus       145 ~e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~-----~~~~~~~~~~~~~~---  213 (248)
                                    ...|+.||+..+.+.+.++.+   .|++||+|+||.+++|+...     ...........+..   
T Consensus       162 --------------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p  227 (267)
T 1iy8_A          162 --------------QSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNP  227 (267)
T ss_dssp             --------------BHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCT
T ss_pred             --------------CccHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcchhccccccChhhhhhHHHHHhccCC
Confidence                          234999997655555544432   35999999999999986321     00111111111111   


Q ss_pred             -CC------------CCCCCCCchhhhhhhhhcccee
Q 025755          214 -GF------------FFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       214 -~~------------~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                       ++            ++.++...|++|+++.+|||..
T Consensus       228 ~~r~~~~~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~  264 (267)
T 1iy8_A          228 SKRYGEAPEIAAVVAFLLSDDASYVNATVVPIDGGQS  264 (267)
T ss_dssp             TCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTTT
T ss_pred             CCCCcCHHHHHHHHHHHcCccccCCCCCEEEECCCcc
Confidence             11            5666677899999999999964

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=99.98  E-value=4.7e-32  Score=223.88  Aligned_cols=214  Identities=15%  Similarity=0.108  Sum_probs=156.3

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-------
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-------   76 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-------   76 (248)
                      +++|+++||||+||||+++++.|+++|++|++++|+..+......+.+.....++.++.+|++|.++++++++       
T Consensus        27 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  106 (283)
T 1g0o_A           27 LEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFG  106 (283)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            6789999999999999999999999999999999986432222233333335678999999999998887764       


Q ss_pred             CCCEEEEccccCCCCC----CCCccccchhhhHHHHHHHHHHHHhc--CCCEEEEEeccceeccCCCCCCCCccCCCCCC
Q 025755           77 GCTGVFHVACPVPVGK----VPNPEVQLIDPAVVGTKNVLNSCVKA--KVKRVVVVSSIGAVMLNPNWPKGQVMDEECWS  150 (248)
Q Consensus        77 ~id~vi~~ag~~~~~~----~~~~~~~~~~~n~~g~~~~~~~~~~~--~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~  150 (248)
                      ++|+||||||......    ..+.+...+++|+.|+.++++++.+.  +.++||++||..+..+.+.             
T Consensus       107 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~-------------  173 (283)
T 1g0o_A          107 KLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKAVP-------------  173 (283)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSSCS-------------
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEechhhccCCCC-------------
Confidence            6899999999865432    12445678999999999999999886  6689999999776544321             


Q ss_pred             chhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCC-------C-CccHHHHHHHHc------
Q 025755          151 DEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPT-------I-NTSSLLLLGFLK------  213 (248)
Q Consensus       151 ~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~-------~-~~~~~~~~~~~~------  213 (248)
                             ....|+.||+..+.+.+.++.+   .|++||+|+||.+.+++....       . .........+..      
T Consensus       174 -------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~  246 (283)
T 1g0o_A          174 -------KHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPL  246 (283)
T ss_dssp             -------SCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTT
T ss_pred             -------CCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccchhhhhhhhhccccccccCHHHHHHHHhhcCCCC
Confidence                   0234999997666665555533   369999999999999853210       0 001122222211      


Q ss_pred             CC------------CCCCCCCchhhhhhhhhcccee
Q 025755          214 GF------------FFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       214 ~~------------~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                      ++            ++.++...|++|+++.||||+.
T Consensus       247 ~r~~~p~dvA~~v~~l~s~~~~~itG~~i~vdgG~~  282 (283)
T 1g0o_A          247 RRVGLPIDIARVVCFLASNDGGWVTGKVIGIDGGAC  282 (283)
T ss_dssp             CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTCC
T ss_pred             CCCcCHHHHHHHHHHHhCccccCcCCCEEEeCCCcc
Confidence            11            6667778899999999999964

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.98  E-value=9.4e-33  Score=223.61  Aligned_cols=210  Identities=18%  Similarity=0.163  Sum_probs=153.6

Q ss_pred             CCCCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHh---CC
Q 025755            1 MSGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAAT---AG   77 (248)
Q Consensus         1 m~~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~---~~   77 (248)
                      |.++++|+++||||+||||+++++.|+++|++|++++|+..+.     +... ...++.++.+|++|.++++++.   .+
T Consensus         1 m~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~-----~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~   74 (246)
T 2ag5_A            1 MGRLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKL-----QELE-KYPGIQTRVLDVTKKKQIDQFANEVER   74 (246)
T ss_dssp             CCTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHH-----GGGG-GSTTEEEEECCTTCHHHHHHHHHHCSC
T ss_pred             CCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHH-----HHHH-hccCceEEEeeCCCHHHHHHHHHHhCC
Confidence            6678999999999999999999999999999999999975321     1111 1237889999999999988764   47


Q ss_pred             CCEEEEccccCCCCC----CCCccccchhhhHHHHHHHHHHHHh----cCCCEEEEEeccceeccCC-CCCCCCccCCCC
Q 025755           78 CTGVFHVACPVPVGK----VPNPEVQLIDPAVVGTKNVLNSCVK----AKVKRVVVVSSIGAVMLNP-NWPKGQVMDEEC  148 (248)
Q Consensus        78 id~vi~~ag~~~~~~----~~~~~~~~~~~n~~g~~~~~~~~~~----~~~~~iV~vSS~~~~~~~~-~~~~~~~~~e~~  148 (248)
                      +|+||||||......    ..+.|+..+++|+.++.++++++.+    .+.++||++||..+..+.+ .           
T Consensus        75 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-----------  143 (246)
T 2ag5_A           75 LDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVN-----------  143 (246)
T ss_dssp             CSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCTT-----------
T ss_pred             CCEEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHhCcCCCCC-----------
Confidence            899999999765431    1234567889999999998888764    4678999999977654432 1           


Q ss_pred             CCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCC---CccHHHHHHHH----cCC---
Q 025755          149 WSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTI---NTSSLLLLGFL----KGF---  215 (248)
Q Consensus       149 ~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~---~~~~~~~~~~~----~~~---  215 (248)
                                ...|+.||+..+.+.+.++.+   .++++++|+||+++||+.....   .........+.    .++   
T Consensus       144 ----------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (246)
T 2ag5_A          144 ----------RCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFAT  213 (246)
T ss_dssp             ----------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTTSSCEE
T ss_pred             ----------CccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCcCcCcchhhhhhcccCcHHHHHHHHhcCCCCCCCC
Confidence                      234999998766666665543   2699999999999998642100   00011111111    111   


Q ss_pred             ---------CCCCCCCchhhhhhhhhcccee
Q 025755          216 ---------FFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       216 ---------~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                               ++.++...|++|+++.+|||+.
T Consensus       214 ~~dvA~~v~~l~s~~~~~~tG~~i~vdgG~~  244 (246)
T 2ag5_A          214 AEEIAMLCVYLASDESAYVTGNPVIIDGGWS  244 (246)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEECTTGG
T ss_pred             HHHHHHHHHHHhCccccCCCCCEEEECCCcc
Confidence                     5667777899999999999975

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=99.98  E-value=1.3e-32  Score=224.61  Aligned_cols=213  Identities=11%  Similarity=0.038  Sum_probs=150.4

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCC--CCCeEEEEccCCCHHHHHHHhC----
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGA--SENLQLFKTDLLDYEALCAATA----   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Di~d~~~~~~~~~----   76 (248)
                      ++++|+++||||+||||++++++|+++|++|++++|+.... ....+.+...  ..++.++.+|++|.++++++++    
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   82 (260)
T 2z1n_A            4 GIQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKL-EAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARD   82 (260)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence            37889999999999999999999999999999999986322 2222222211  2278899999999999998886    


Q ss_pred             --CCCEEEEccccCCCCC----CCCccccchhhhHHHHHHHHHHHH----hcCCCEEEEEeccceeccCCCCCCCCccCC
Q 025755           77 --GCTGVFHVACPVPVGK----VPNPEVQLIDPAVVGTKNVLNSCV----KAKVKRVVVVSSIGAVMLNPNWPKGQVMDE  146 (248)
Q Consensus        77 --~id~vi~~ag~~~~~~----~~~~~~~~~~~n~~g~~~~~~~~~----~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e  146 (248)
                        ++|+||||||......    ..+.|...+++|+.++.++++++.    +.+.++||++||..++.+.+.         
T Consensus        83 ~~gid~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---------  153 (260)
T 2z1n_A           83 LGGADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLRPWQD---------  153 (260)
T ss_dssp             TTCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT---------
T ss_pred             hcCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCC---------
Confidence              5999999999754321    123557789999999977666654    446789999999876655432         


Q ss_pred             CCCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCC-------CccHHH-HHHHH---
Q 025755          147 ECWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTI-------NTSSLL-LLGFL---  212 (248)
Q Consensus       147 ~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~-------~~~~~~-~~~~~---  212 (248)
                                  ...|+.||+..+.+.+.++.+   .|+++++|+||++++|+.....       ...... ...+.   
T Consensus       154 ------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (260)
T 2z1n_A          154 ------------LALSNIMRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRVRSLAEERARRSGITVEEALKSMASRI  221 (260)
T ss_dssp             ------------BHHHHHHTHHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCCC-----------------------CC
T ss_pred             ------------CchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEEECCcccchhhhhhhhhhcccCCcHHHHHHHHHhcC
Confidence                        234999997655555555443   2599999999999999754100       000000 11111   


Q ss_pred             -cCC------------CCCCCCCchhhhhhhhhcccee
Q 025755          213 -KGF------------FFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       213 -~~~------------~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                       .++            ++.++...|++|+++.+|||+.
T Consensus       222 p~~r~~~~~dva~~v~~l~s~~~~~~tG~~i~vdGG~~  259 (260)
T 2z1n_A          222 PMGRVGKPEELASVVAFLASEKASFITGAVIPVDGGAH  259 (260)
T ss_dssp             TTSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTTT
T ss_pred             CCCCccCHHHHHHHHHHHhCccccCCCCCEEEeCCCcc
Confidence             111            5666667899999999999964

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=99.98  E-value=2.1e-32  Score=223.61  Aligned_cols=210  Identities=18%  Similarity=0.168  Sum_probs=153.3

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC------
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA------   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~------   76 (248)
                      ++++|+++||||+||||+++++.|+++|++|++++|+... .....+.+.....++.++.+|++|.++++++++      
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (262)
T 1zem_A            4 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREA-LEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDF   82 (262)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHH-HHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHh
Confidence            4789999999999999999999999999999999998632 223333344445678999999999998888775      


Q ss_pred             -CCCEEEEccccC-CCCC----CCCccccchhhhHHHHHHHHHHHHhc----CCCEEEEEeccceeccCCCCCCCCccCC
Q 025755           77 -GCTGVFHVACPV-PVGK----VPNPEVQLIDPAVVGTKNVLNSCVKA----KVKRVVVVSSIGAVMLNPNWPKGQVMDE  146 (248)
Q Consensus        77 -~id~vi~~ag~~-~~~~----~~~~~~~~~~~n~~g~~~~~~~~~~~----~~~~iV~vSS~~~~~~~~~~~~~~~~~e  146 (248)
                       ++|+||||||.. ....    ..+.|...+++|+.++.++++++.+.    +.++||++||..++.+.+..        
T Consensus        83 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~--------  154 (262)
T 1zem_A           83 GKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNM--------  154 (262)
T ss_dssp             SCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTTB--------
T ss_pred             CCCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCC--------
Confidence             689999999976 2211    12445778999999999988887653    56899999998776654332        


Q ss_pred             CCCCchhhhccccchHHHHHHH----HHHHHHHHHHhCCccEEEEccCeeecCCCCCC------------CCccHH-HHH
Q 025755          147 ECWSDEEFCKATENYYCLAKTI----AEIQALEYAKRGELDIVTVCPSIVIGPMLQPT------------INTSSL-LLL  209 (248)
Q Consensus       147 ~~~~~~~~~~~~~~~Y~~sK~~----~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~------------~~~~~~-~~~  209 (248)
                                   ..|+.||+.    ++.++.++++. +++||+|+||++.+++....            ...... ...
T Consensus       155 -------------~~Y~asK~a~~~~~~~la~e~~~~-gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (262)
T 1zem_A          155 -------------AAYGTSKGAIIALTETAALDLAPY-NIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQ  220 (262)
T ss_dssp             -------------HHHHHHHHHHHHHHHHHHHHHGGG-TEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHH
T ss_pred             -------------chHHHHHHHHHHHHHHHHHHHHhh-CeEEEEEecCCcCcchhhhhccchhhhccccccccCHHHHHH
Confidence                         349999964    55555555544 59999999999999863210            000111 111


Q ss_pred             HHH----cCC------------CCCCCCCchhhhhhhhhccc
Q 025755          210 GFL----KGF------------FFTTPSHSYMLERTLVLNQG  235 (248)
Q Consensus       210 ~~~----~~~------------~l~~~~~~~~~g~~l~vd~g  235 (248)
                      .+.    .++            ++.++...|+||+++.||||
T Consensus       221 ~~~~~~p~~r~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG  262 (262)
T 1zem_A          221 QMIGSVPMRRYGDINEIPGVVAFLLGDDSSFMTGVNLPIAGG  262 (262)
T ss_dssp             HHHHTSTTSSCBCGGGSHHHHHHHHSGGGTTCCSCEEEESCC
T ss_pred             HHHhcCCCCCCcCHHHHHHHHHHHcCchhcCcCCcEEecCCC
Confidence            111    121            66677778999999999997

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=99.98  E-value=4.8e-32  Score=223.51  Aligned_cols=214  Identities=14%  Similarity=0.062  Sum_probs=158.2

Q ss_pred             CCCCCCcEEEEEcCc--cHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC--
Q 025755            1 MSGEDKERVCVTGAG--GYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA--   76 (248)
Q Consensus         1 m~~l~~k~vlVtG~~--g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~--   76 (248)
                      |..+++|+++||||+  +|||+++++.|+++|++|++++|+..   ....+.+....+++.++.+|++|.++++++++  
T Consensus        21 M~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~---~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~   97 (280)
T 3nrc_A           21 MGFLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQF---KDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVEL   97 (280)
T ss_dssp             -CTTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTTC---HHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHH
T ss_pred             ccccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCchH---HHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHH
Confidence            566889999999998  66999999999999999999999862   22333333334568999999999999888875  


Q ss_pred             -----CCCEEEEccccCCCC---------CCCCccccchhhhHHHHHHHHHHHHhc---CCCEEEEEeccceeccCCCCC
Q 025755           77 -----GCTGVFHVACPVPVG---------KVPNPEVQLIDPAVVGTKNVLNSCVKA---KVKRVVVVSSIGAVMLNPNWP  139 (248)
Q Consensus        77 -----~id~vi~~ag~~~~~---------~~~~~~~~~~~~n~~g~~~~~~~~~~~---~~~~iV~vSS~~~~~~~~~~~  139 (248)
                           ++|+||||||.....         ...+.+...+++|+.++.++++++.+.   +.++||++||..+..+.+.. 
T Consensus        98 ~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-  176 (280)
T 3nrc_A           98 GKVWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNRNASMVALTYIGAEKAMPSY-  176 (280)
T ss_dssp             HHHCSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECGGGTSCCTTT-
T ss_pred             HHHcCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeccccccCCCCc-
Confidence                 579999999986541         123445678999999999999998764   45799999998876665432 


Q ss_pred             CCCccCCCCCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCCCccHHHHHHH----H
Q 025755          140 KGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTINTSSLLLLGF----L  212 (248)
Q Consensus       140 ~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~----~  212 (248)
                                          ..|+.||++.+.+++.++.+   .+++|++|+||.+.+++...... ........    .
T Consensus       177 --------------------~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~p  235 (280)
T 3nrc_A          177 --------------------NTMGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASGISN-FKKMLDYNAMVSP  235 (280)
T ss_dssp             --------------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGGGCTT-HHHHHHHHHHHST
T ss_pred             --------------------hhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhhcCcc-hHHHHHHHHhcCC
Confidence                                33999997555555544432   35999999999999987653311 11111111    1


Q ss_pred             cCC------------CCCCCCCchhhhhhhhhccceeEE
Q 025755          213 KGF------------FFTTPSHSYMLERTLVLNQGVRLY  239 (248)
Q Consensus       213 ~~~------------~l~~~~~~~~~g~~l~vd~g~~~~  239 (248)
                      .++            ++..+...|++|+++.+|||+.+.
T Consensus       236 ~~~~~~pedvA~~v~~l~s~~~~~~tG~~i~vdgG~~~~  274 (280)
T 3nrc_A          236 LKKNVDIMEVGNTVAFLCSDMATGITGEVVHVDAGYHCV  274 (280)
T ss_dssp             TCSCCCHHHHHHHHHHTTSGGGTTCCSCEEEESTTGGGC
T ss_pred             CCCCCCHHHHHHHHHHHhCcccCCcCCcEEEECCCcccc
Confidence            111            677777899999999999998743

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=99.98  E-value=4.7e-32  Score=222.09  Aligned_cols=214  Identities=16%  Similarity=0.126  Sum_probs=157.2

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCC--CCCeEEEEccCCCHHHHHHHhC---C
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGA--SENLQLFKTDLLDYEALCAATA---G   77 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Di~d~~~~~~~~~---~   77 (248)
                      ++++|+++||||+||||++++++|+++|++|++++|+.+.. ....+++...  ...+.++.+|++|.++++++++   +
T Consensus         7 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~-~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~   85 (267)
T 3t4x_A            7 QLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENV-NETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKYPK   85 (267)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHH-HHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCCC
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhcCC
Confidence            47889999999999999999999999999999999986432 2223333221  3467889999999999888876   6


Q ss_pred             CCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHH----hcCCCEEEEEeccceeccCCCCCCCCccCCCCC
Q 025755           78 CTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCV----KAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECW  149 (248)
Q Consensus        78 id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~----~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~  149 (248)
                      +|++|||||.......    .+.|+..+++|+.++.++++++.    +.+.++||++||..++.+.+..           
T Consensus        86 id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-----------  154 (267)
T 3t4x_A           86 VDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAIMPSQEM-----------  154 (267)
T ss_dssp             CSEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGGTSCCTTC-----------
T ss_pred             CCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhhccCCCcc-----------
Confidence            8999999998654322    23456779999999877766654    4567899999998877665432           


Q ss_pred             CchhhhccccchHHHHHHHHHHHHHHHHHhC---CccEEEEccCeeecCCCCC-------CCC-ccHH----HHHHHHc-
Q 025755          150 SDEEFCKATENYYCLAKTIAEIQALEYAKRG---ELDIVTVCPSIVIGPMLQP-------TIN-TSSL----LLLGFLK-  213 (248)
Q Consensus       150 ~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~---~i~v~~vrpg~i~g~~~~~-------~~~-~~~~----~~~~~~~-  213 (248)
                                ..|+.||++.+.+.+.++.+.   +++||+|+||.+.+|+...       ... ....    ++..... 
T Consensus       155 ----------~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (267)
T 3t4x_A          155 ----------AHYSATKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTEGVETMLNSLYPNEQLTIEEAEKRFMKENRPT  224 (267)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECCBCCHHHHHHHHHSSTTSCCCHHHHHHHHHHHHCTT
T ss_pred             ----------hHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCeecCccHHHHHhhcCcccCCCHHHHHHHHhhccCCc
Confidence                      349999987777777776543   5999999999999974211       000 0111    1111111 


Q ss_pred             ---CC------------CCCCCCCchhhhhhhhhccceeE
Q 025755          214 ---GF------------FFTTPSHSYMLERTLVLNQGVRL  238 (248)
Q Consensus       214 ---~~------------~l~~~~~~~~~g~~l~vd~g~~~  238 (248)
                         ++            |+.++.+.|+||+++.||||+..
T Consensus       225 ~~~~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG~~~  264 (267)
T 3t4x_A          225 SIIQRLIRPEEIAHLVTFLSSPLSSAINGSALRIDGGLVR  264 (267)
T ss_dssp             CSSCSCBCTHHHHHHHHHHHSGGGTTCCSCEEEESTTCSC
T ss_pred             ccccCccCHHHHHHHHHHHcCccccCccCCeEEECCCccc
Confidence               11            77888889999999999999753

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=99.98  E-value=1.6e-32  Score=225.89  Aligned_cols=208  Identities=16%  Similarity=0.163  Sum_probs=150.7

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEc-CCCchhhHHhhhhcCC-CCCeEEEEccCCCH----HHHHHHhC-
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVR-DPCDEKNAHLKKLEGA-SENLQLFKTDLLDY----EALCAATA-   76 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r-~~~~~~~~~~~~~~~~-~~~~~~~~~Di~d~----~~~~~~~~-   76 (248)
                      |++|+++||||+||||+++++.|+++|++|++++| +.. ......+.+... ..++.++.+|++|.    ++++++++ 
T Consensus         9 ~~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   87 (276)
T 1mxh_A            9 SECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEG-AAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDC   87 (276)
T ss_dssp             --CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHH-HHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChH-HHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHH
Confidence            67899999999999999999999999999999999 543 222222333222 35789999999999    88888775 


Q ss_pred             ------CCCEEEEccccCCCCCC----C-----------CccccchhhhHHHHHHHHHHHHhc---CC------CEEEEE
Q 025755           77 ------GCTGVFHVACPVPVGKV----P-----------NPEVQLIDPAVVGTKNVLNSCVKA---KV------KRVVVV  126 (248)
Q Consensus        77 ------~id~vi~~ag~~~~~~~----~-----------~~~~~~~~~n~~g~~~~~~~~~~~---~~------~~iV~v  126 (248)
                            ++|+||||||.......    .           +.+..++++|+.++.++++++.+.   +.      ++||++
T Consensus        88 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~g~iv~i  167 (276)
T 1mxh_A           88 SFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNL  167 (276)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEE
T ss_pred             HHHhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHhcCCCCCCCCcEEEEE
Confidence                  68999999997653321    1           445678999999999999999874   33      799999


Q ss_pred             eccceeccCCCCCCCCccCCCCCCchhhhccccchHHHHHHHHHHHHHHHHHhC---CccEEEEccCeeecCCCCCCCCc
Q 025755          127 SSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKRG---ELDIVTVCPSIVIGPMLQPTINT  203 (248)
Q Consensus       127 SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~---~i~v~~vrpg~i~g~~~~~~~~~  203 (248)
                      ||..++.+.+..                     ..|+.||+..+.+.+.++.+.   |++||+|+||.+++| ...    
T Consensus       168 sS~~~~~~~~~~---------------------~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~-~~~----  221 (276)
T 1mxh_A          168 CDAMTDLPLPGF---------------------CVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP-PAM----  221 (276)
T ss_dssp             CCGGGGSCCTTC---------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC-SSS----
T ss_pred             CchhhcCCCCCC---------------------eehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC-ccC----
Confidence            998876654432                     339999986666666555432   699999999999998 211    


Q ss_pred             cHHHHHHHHc----CC-------------CCCCCCCchhhhhhhhhccceeE
Q 025755          204 SSLLLLGFLK----GF-------------FFTTPSHSYMLERTLVLNQGVRL  238 (248)
Q Consensus       204 ~~~~~~~~~~----~~-------------~l~~~~~~~~~g~~l~vd~g~~~  238 (248)
                      .......+..    ++             ++.++...|++|+++.+|||+.+
T Consensus       222 ~~~~~~~~~~~~p~~r~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~~  273 (276)
T 1mxh_A          222 PQETQEEYRRKVPLGQSEASAAQIADAIAFLVSKDAGYITGTTLKVDGGLIL  273 (276)
T ss_dssp             CHHHHHHHHTTCTTTSCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             CHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhCccccCccCcEEEECCchhc
Confidence            1111111111    00             55566678999999999999753

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=99.98  E-value=1.9e-32  Score=231.87  Aligned_cols=201  Identities=17%  Similarity=0.130  Sum_probs=148.1

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCC--CCEEEE
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAG--CTGVFH   83 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~--id~vi~   83 (248)
                      ||+||||||+||||++++++|+++|++|++++|+...........+.. .+++.++.+|++|.+++.+++++  +|+|||
T Consensus         1 M~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~-~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih   79 (347)
T 1orr_A            1 MAKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSS-LGNFEFVHGDIRNKNDVTRLITKYMPDSCFH   79 (347)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHT-TCCCEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             CcEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhcc-CCceEEEEcCCCCHHHHHHHHhccCCCEEEE
Confidence            469999999999999999999999999999998642222222222322 24688999999999999999987  999999


Q ss_pred             ccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCC-EEEEEeccceeccCCCCCC-------------CCccCCCCC
Q 025755           84 VACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVK-RVVVVSSIGAVMLNPNWPK-------------GQVMDEECW  149 (248)
Q Consensus        84 ~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~-~iV~vSS~~~~~~~~~~~~-------------~~~~~e~~~  149 (248)
                      +||..........+..++++|+.++.++++++.+.+.+ +|||+||... |+.....+             ..+++|+.+
T Consensus        80 ~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~iv~~SS~~v-~g~~~~~~~~e~~~~~~~~~~~~~~~e~~~  158 (347)
T 1orr_A           80 LAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKV-YGDLEQYKYNETETRYTCVDKPNGYDESTQ  158 (347)
T ss_dssp             CCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGG-GTTCTTSCEEECSSCEEETTCTTCBCTTSC
T ss_pred             CCcccChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEeccHHH-hCCCCcCCcccccccccccccccCccccCC
Confidence            99975432112345678999999999999999998774 9999999764 44321000             012334333


Q ss_pred             CchhhhccccchHHHHHHHHHHHHHHHHHhCCccEEEEccCeeecCCCCCC--CCccHHHHHHHHcC
Q 025755          150 SDEEFCKATENYYCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPT--INTSSLLLLGFLKG  214 (248)
Q Consensus       150 ~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~--~~~~~~~~~~~~~~  214 (248)
                      .      .+.+.|+.+|..+|.+++.++.+++++++++||+++|||.....  ......++..+..+
T Consensus       159 ~------~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~  219 (347)
T 1orr_A          159 L------DFHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEI  219 (347)
T ss_dssp             C------CCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHH
T ss_pred             C------CCCCchHHHHHHHHHHHHHHHHHhCCcEEEEccCceeCcCCCCCCcCcHHHHHHHHHHhC
Confidence            2      34567999999999999999887789999999999999986542  12334455555444

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=99.98  E-value=7e-32  Score=222.66  Aligned_cols=212  Identities=16%  Similarity=0.057  Sum_probs=153.9

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC------
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA------   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~------   76 (248)
                      ++++|+++||||++|||+++++.|+++|++|++++|+.+.. ....+.   ...++.++.+|++|.++++++++      
T Consensus         2 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~-~~~~~~---~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   77 (281)
T 3zv4_A            2 KLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERL-RELEVA---HGGNAVGVVGDVRSLQDQKRAAERCLAAF   77 (281)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHH---TBTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CcCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHH-HHHHHH---cCCcEEEEEcCCCCHHHHHHHHHHHHHhc
Confidence            38999999999999999999999999999999999986422 222222   24678999999999999888765      


Q ss_pred             -CCCEEEEccccCCCCCC----C-----CccccchhhhHHHHHHHHHHHHhc---CCCEEEEEeccceeccCCCCCCCCc
Q 025755           77 -GCTGVFHVACPVPVGKV----P-----NPEVQLIDPAVVGTKNVLNSCVKA---KVKRVVVVSSIGAVMLNPNWPKGQV  143 (248)
Q Consensus        77 -~id~vi~~ag~~~~~~~----~-----~~~~~~~~~n~~g~~~~~~~~~~~---~~~~iV~vSS~~~~~~~~~~~~~~~  143 (248)
                       ++|+||||||.......    .     +.|+..+++|+.++.++++++.+.   +.++||++||..+..+.+..     
T Consensus        78 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-----  152 (281)
T 3zv4_A           78 GKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSRGSVVFTISNAGFYPNGGG-----  152 (281)
T ss_dssp             SCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTSSSSSC-----
T ss_pred             CCCCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCeEEEEecchhccCCCCC-----
Confidence             68999999998643211    1     125668899999999999888653   23799999998877665442     


Q ss_pred             cCCCCCCchhhhccccchHHHHHHHHHHHHHHHHHhC--CccEEEEccCeeecCCCCCCCC----------ccHHHH-HH
Q 025755          144 MDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKRG--ELDIVTVCPSIVIGPMLQPTIN----------TSSLLL-LG  210 (248)
Q Consensus       144 ~~e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~--~i~v~~vrpg~i~g~~~~~~~~----------~~~~~~-~~  210 (248)
                                      ..|+.||++.+.+.+.++.+.  +||||+|+||.+.+++......          .....+ ..
T Consensus       153 ----------------~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (281)
T 3zv4_A          153 ----------------PLYTATKHAVVGLVRQMAFELAPHVRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSV  216 (281)
T ss_dssp             ----------------HHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSSCC--CCCTTCC--------CCHHHHHHHT
T ss_pred             ----------------chhHHHHHHHHHHHHHHHHHhcCCCEEEEEECCcCcCCcccccccccccccccchhHHHHHHhc
Confidence                            239999976666655555432  3999999999999997543210          011111 11


Q ss_pred             HHcCC------------CCCC-CCCchhhhhhhhhccceeEE
Q 025755          211 FLKGF------------FFTT-PSHSYMLERTLVLNQGVRLY  239 (248)
Q Consensus       211 ~~~~~------------~l~~-~~~~~~~g~~l~vd~g~~~~  239 (248)
                      ...++            |+.+ +.+.|+||+++.||||+.+.
T Consensus       217 ~p~~r~~~pedvA~~v~fL~s~~~~~~itG~~i~vdGG~~~~  258 (281)
T 3zv4_A          217 LPIGRMPALEEYTGAYVFFATRGDSLPATGALLNYDGGMGVR  258 (281)
T ss_dssp             CTTSSCCCGGGGSHHHHHHHSTTTSTTCSSCEEEESSSGGGC
T ss_pred             CCCCCCCCHHHHHHHHHHhhcccccccccCcEEEECCCCccc
Confidence            11121            6777 77889999999999998754

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=99.98  E-value=3.2e-32  Score=222.22  Aligned_cols=214  Identities=17%  Similarity=0.134  Sum_probs=147.1

Q ss_pred             CCCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-----
Q 025755            2 SGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-----   76 (248)
Q Consensus         2 ~~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-----   76 (248)
                      +++++|+++||||+||||++++++|+++|++|++++|+.... ....+.+   ..++.++.+|++|.++++++++     
T Consensus         5 m~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~-~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~   80 (261)
T 3n74_A            5 MSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGA-ERVAGEI---GDAALAVAADISKEADVDAAVEAALSK   80 (261)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHHH---CTTEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHH-HHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHh
Confidence            357899999999999999999999999999999999986432 2222222   4578999999999999888876     


Q ss_pred             --CCCEEEEccccCCCCC-----CCCccccchhhhHHHHHHHHHHHHhc----C----CCEEEEEeccceeccCCCCCCC
Q 025755           77 --GCTGVFHVACPVPVGK-----VPNPEVQLIDPAVVGTKNVLNSCVKA----K----VKRVVVVSSIGAVMLNPNWPKG  141 (248)
Q Consensus        77 --~id~vi~~ag~~~~~~-----~~~~~~~~~~~n~~g~~~~~~~~~~~----~----~~~iV~vSS~~~~~~~~~~~~~  141 (248)
                        ++|+||||||......     ..+.+...+++|+.++.++++++.+.    +    .++||++||..+..+.+..   
T Consensus        81 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~---  157 (261)
T 3n74_A           81 FGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRPRPNL---  157 (261)
T ss_dssp             HSCCCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTSCCTTC---
T ss_pred             cCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcCCCCCc---
Confidence              6899999999765221     12345678999999998888887543    1    4679999998776655432   


Q ss_pred             CccCCCCCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCCCc-cHHHHHH----HHc
Q 025755          142 QVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTINT-SSLLLLG----FLK  213 (248)
Q Consensus       142 ~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~~~-~~~~~~~----~~~  213 (248)
                                        ..|+.||++.+.+.+.++.+   .++++++|+||.+.+++....... .......    ...
T Consensus       158 ------------------~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~  219 (261)
T 3n74_A          158 ------------------AWYNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLTTFMGEDSEEIRKKFRDSIPM  219 (261)
T ss_dssp             ------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------------------------CTT
T ss_pred             ------------------cHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhhhhhcccCcHHHHHHHhhcCCc
Confidence                              33999997555555555443   359999999999999875432100 0111111    111


Q ss_pred             CC------------CCCCCCCchhhhhhhhhccceeEEE
Q 025755          214 GF------------FFTTPSHSYMLERTLVLNQGVRLYR  240 (248)
Q Consensus       214 ~~------------~l~~~~~~~~~g~~l~vd~g~~~~~  240 (248)
                      ++            ++.++...|++|+++.+|||+.+..
T Consensus       220 ~~~~~~~dva~~~~~l~s~~~~~itG~~i~vdgG~~~~~  258 (261)
T 3n74_A          220 GRLLKPDDLAEAAAFLCSPQASMITGVALDVDGGRSIGG  258 (261)
T ss_dssp             SSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTTTC--
T ss_pred             CCCcCHHHHHHHHHHHcCCcccCcCCcEEEecCCcccCC
Confidence            11            6777788999999999999987643

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=99.98  E-value=6.7e-32  Score=220.38  Aligned_cols=209  Identities=14%  Similarity=0.122  Sum_probs=153.2

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC------
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA------   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~------   76 (248)
                      ++++|+++||||+||||++++++|+++|++|++++|+.... ....+.+.   .++.++.+|++|.++++++++      
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~-~~~~~~~~---~~~~~~~~D~~~~~~v~~~~~~~~~~~   79 (260)
T 1nff_A            4 RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEG-KAMAAELA---DAARYVHLDVTQPAQWKAAVDTAVTAF   79 (260)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHHTG---GGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHHhh---cCceEEEecCCCHHHHHHHHHHHHHHc
Confidence            47889999999999999999999999999999999986322 22222221   248889999999999998887      


Q ss_pred             -CCCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHH----HhcCCCEEEEEeccceeccCCCCCCCCccCCC
Q 025755           77 -GCTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSC----VKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEE  147 (248)
Q Consensus        77 -~id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~----~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~  147 (248)
                       ++|+||||||.......    .+.+...+++|+.++.++++++    ++.+.++||++||..++.+.+.          
T Consensus        80 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~----------  149 (260)
T 1nff_A           80 GGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVA----------  149 (260)
T ss_dssp             SCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT----------
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEeehhhcCCCCC----------
Confidence             79999999997654321    2345678999999997666555    4456789999999877655432          


Q ss_pred             CCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCC----------CccHHHHHHHHcC
Q 025755          148 CWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTI----------NTSSLLLLGFLKG  214 (248)
Q Consensus       148 ~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~----------~~~~~~~~~~~~~  214 (248)
                                 ...|+.||+..+.+.+.++.+   .|+++++|+||.++||+.....          ...+.-+..... 
T Consensus       150 -----------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~dvA~~v~-  217 (260)
T 1nff_A          150 -----------CHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDWVPEDIFQTALGRAAEPVEVSNLVV-  217 (260)
T ss_dssp             -----------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTTSCTTCSCCSSSSCBCHHHHHHHHH-
T ss_pred             -----------chhHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCCCCccccchhhHHhCccCCCCCHHHHHHHHH-
Confidence                       234999998777776666544   3699999999999998743100          011222222221 


Q ss_pred             CCCCCCCCchhhhhhhhhccceeE
Q 025755          215 FFFTTPSHSYMLERTLVLNQGVRL  238 (248)
Q Consensus       215 ~~l~~~~~~~~~g~~l~vd~g~~~  238 (248)
                       ++.++...|++|+++.+|||..+
T Consensus       218 -~l~s~~~~~~~G~~~~v~gG~~~  240 (260)
T 1nff_A          218 -YLASDESSYSTGAEFVVDGGTVA  240 (260)
T ss_dssp             -HHHSGGGTTCCSCEEEESTTGGG
T ss_pred             -HHhCccccCCcCCEEEECCCeec
Confidence             45566678999999999999764

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=99.98  E-value=5.1e-32  Score=219.50  Aligned_cols=211  Identities=16%  Similarity=0.117  Sum_probs=154.4

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhh-cCCCCCeEEEEccCCCHHHHHHHhC-------
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKL-EGASENLQLFKTDLLDYEALCAATA-------   76 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~Di~d~~~~~~~~~-------   76 (248)
                      ++|+++||||+||||++++++|+++|++|++++|+..+. ....+.+ .....++.++.+|++|.++++++++       
T Consensus         1 ~~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   79 (250)
T 2cfc_A            1 MSRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETL-EETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFG   79 (250)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            368999999999999999999999999999999986422 2222223 2224578999999999999988876       


Q ss_pred             CCCEEEEccccCCCCC-------CCCccccchhhhHHHHHHHHHHHH----hcCCCEEEEEeccceeccCCCCCCCCccC
Q 025755           77 GCTGVFHVACPVPVGK-------VPNPEVQLIDPAVVGTKNVLNSCV----KAKVKRVVVVSSIGAVMLNPNWPKGQVMD  145 (248)
Q Consensus        77 ~id~vi~~ag~~~~~~-------~~~~~~~~~~~n~~g~~~~~~~~~----~~~~~~iV~vSS~~~~~~~~~~~~~~~~~  145 (248)
                      ++|+||||||......       ..+.+...+++|+.++.++++++.    +.+.++||++||..++.+.+.        
T Consensus        80 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~--------  151 (250)
T 2cfc_A           80 AIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVAFPG--------  151 (250)
T ss_dssp             CCCEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT--------
T ss_pred             CCCEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCCC--------
Confidence            7899999999764322       123456788999999977766664    446789999999876655432        


Q ss_pred             CCCCCchhhhccccchHHHHHHHHHHHHHHHHHhC---CccEEEEccCeeecCCCCCCCCccHHHHHHHHcCC-------
Q 025755          146 EECWSDEEFCKATENYYCLAKTIAEIQALEYAKRG---ELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKGF-------  215 (248)
Q Consensus       146 e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~---~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~~~-------  215 (248)
                                   ...|+.||++.+.+++.++.+.   ++++++++||+++||+..... ....+...+..+.       
T Consensus       152 -------------~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~  217 (250)
T 2cfc_A          152 -------------RSAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWRL-DQPELRDQVLARIPQKEIGT  217 (250)
T ss_dssp             -------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHHHH-TSHHHHHHHHTTCTTCSCBC
T ss_pred             -------------chhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccCcccccc-CCHHHHHHHHhcCCCCCCcC
Confidence                         2349999988877777776543   699999999999999754210 0112222222111       


Q ss_pred             ---------CCCCCCCchhhhhhhhhccceeE
Q 025755          216 ---------FFTTPSHSYMLERTLVLNQGVRL  238 (248)
Q Consensus       216 ---------~l~~~~~~~~~g~~l~vd~g~~~  238 (248)
                               ++..+...+++|+++.+|||+.+
T Consensus       218 ~~dva~~~~~l~~~~~~~~~G~~~~v~gG~~~  249 (250)
T 2cfc_A          218 AAQVADAVMFLAGEDATYVNGAALVMDGAYTA  249 (250)
T ss_dssp             HHHHHHHHHHHHSTTCTTCCSCEEEESTTGGG
T ss_pred             HHHHHHHHHHHcCchhhcccCCEEEECCceec
Confidence                     45566678999999999999753

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=99.97  E-value=1.4e-32  Score=237.45  Aligned_cols=237  Identities=17%  Similarity=0.122  Sum_probs=170.2

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhh---------------HHhhhh-cCCCCCeEEEEccCCC
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKN---------------AHLKKL-EGASENLQLFKTDLLD   67 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~---------------~~~~~~-~~~~~~~~~~~~Di~d   67 (248)
                      ..|++||||||+||||++++++|+++|++|++++|.......               ...... .....++.++.+|++|
T Consensus         9 ~~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~Dl~d   88 (404)
T 1i24_A            9 HHGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICD   88 (404)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTS
T ss_pred             cCCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECCCCC
Confidence            357899999999999999999999999999999886421100               011110 0113578899999999


Q ss_pred             HHHHHHHhCC--CCEEEEccccCCCCCCCCcc---ccchhhhHHHHHHHHHHHHhcCC-CEEEEEeccceeccCCCCCCC
Q 025755           68 YEALCAATAG--CTGVFHVACPVPVGKVPNPE---VQLIDPAVVGTKNVLNSCVKAKV-KRVVVVSSIGAVMLNPNWPKG  141 (248)
Q Consensus        68 ~~~~~~~~~~--id~vi~~ag~~~~~~~~~~~---~~~~~~n~~g~~~~~~~~~~~~~-~~iV~vSS~~~~~~~~~~~~~  141 (248)
                      .+++.+++++  +|+||||||..........+   ..++++|+.|+.++++++.+.+. ++|||+||.+ +|+..    .
T Consensus        89 ~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~~~V~~SS~~-vyg~~----~  163 (404)
T 1i24_A           89 FEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMG-EYGTP----N  163 (404)
T ss_dssp             HHHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGG-GGCCC----S
T ss_pred             HHHHHHHHhccCCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHhCCCcEEEEeCcHH-HhCCC----C
Confidence            9999999987  99999999975432111121   34789999999999999999876 5999999965 45543    2


Q ss_pred             CccCCCCCCchh--------hhccccchHHHHHHHHHHHHHHHHHhCCccEEEEccCeeecCCCCCC-------------
Q 025755          142 QVMDEECWSDEE--------FCKATENYYCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPT-------------  200 (248)
Q Consensus       142 ~~~~e~~~~~~~--------~~~~~~~~Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~-------------  200 (248)
                      .+++|+.+...+        ....+.++|+.||.++|.++..++.+++++++++||+++|||.....             
T Consensus       164 ~~~~E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ivrp~~v~Gp~~~~~~~~~~~~~~~~~~  243 (404)
T 1i24_A          164 IDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYD  243 (404)
T ss_dssp             SCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCS
T ss_pred             CCCCccccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhcCCeEEEEecceeeCCCCCccccccccccccccc
Confidence            345555321100        12345677999999999999999877789999999999999976421             


Q ss_pred             ---CCccHHHHHHHHcCCCCCCCCCchhhhhhhhhccceeEEEeeccC
Q 025755          201 ---INTSSLLLLGFLKGFFFTTPSHSYMLERTLVLNQGVRLYRCKIQI  245 (248)
Q Consensus       201 ---~~~~~~~~~~~~~~~~l~~~~~~~~~g~~l~vd~g~~~~~~~~~~  245 (248)
                         ......++..+..+..+....++....+.++|++...++..+++.
T Consensus       244 ~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~~~~l~~  291 (404)
T 1i24_A          244 AVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIAN  291 (404)
T ss_dssp             TTTCCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHS
T ss_pred             cchhhHHHHHHHHHHcCCeeEEeCCCCceECcEEHHHHHHHHHHHHhC
Confidence               134567778888877654444444455678999888777666544

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.97  E-value=4.3e-32  Score=228.80  Aligned_cols=230  Identities=18%  Similarity=0.092  Sum_probs=170.7

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCC--CCEEE
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAG--CTGVF   82 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~--id~vi   82 (248)
                      .+++||||||+||||++++++|+++|++|++++|+.........+.+. ...++.++.+|++|.+++.+++++  +|+||
T Consensus        13 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vi   91 (335)
T 1rpn_A           13 MTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELG-IEGDIQYEDGDMADACSVQRAVIKAQPQEVY   91 (335)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTT-CGGGEEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred             cCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhcc-ccCceEEEECCCCCHHHHHHHHHHcCCCEEE
Confidence            578999999999999999999999999999999986532222222221 135688999999999999999885  69999


Q ss_pred             EccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCC-CEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccccch
Q 025755           83 HVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKV-KRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENY  161 (248)
Q Consensus        83 ~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~-~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~  161 (248)
                      |+||..........+..++++|+.++.++++++.+.+. ++||++||.. +|+...   ..+++|+++..+      .+.
T Consensus        92 h~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~-v~g~~~---~~~~~E~~~~~p------~~~  161 (335)
T 1rpn_A           92 NLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSE-MFGLIQ---AERQDENTPFYP------RSP  161 (335)
T ss_dssp             ECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGG-GGCSCS---SSSBCTTSCCCC------CSH
T ss_pred             ECccccchhhhhhChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCHH-HhCCCC---CCCCCcccCCCC------CCh
Confidence            99997543222345578899999999999999999885 8999999965 444322   456777776544      456


Q ss_pred             HHHHHHHHHHHHHHHHHhCCccEEEEccCeeecCCCCCCC--CccHHHHHHHHcCCCC-CCCCCchhhhhhhhhccceeE
Q 025755          162 YCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTI--NTSSLLLLGFLKGFFF-TTPSHSYMLERTLVLNQGVRL  238 (248)
Q Consensus       162 Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~--~~~~~~~~~~~~~~~l-~~~~~~~~~g~~l~vd~g~~~  238 (248)
                      |+.+|..+|.+++.++.+++++++++||+.+|||......  .....++..+..+... ....++....+.+++|+...+
T Consensus       162 Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~g~~~~~~i~v~Dva~a  241 (335)
T 1rpn_A          162 YGVAKLYGHWITVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEA  241 (335)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHcCCcEEEEeeCcccCCCCCCCcchHHHHHHHHHHHcCCCceEEeCCCcceeceEEHHHHHHH
Confidence            9999999999999998877799999999999999765431  1234455566666532 222333344567888888776


Q ss_pred             EEeeccC
Q 025755          239 YRCKIQI  245 (248)
Q Consensus       239 ~~~~~~~  245 (248)
                      +..+++.
T Consensus       242 ~~~~~~~  248 (335)
T 1rpn_A          242 MWLMLQQ  248 (335)
T ss_dssp             HHHHHHS
T ss_pred             HHHHHhc
Confidence            6555543

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=99.97  E-value=1.1e-32  Score=224.63  Aligned_cols=205  Identities=17%  Similarity=0.134  Sum_probs=144.5

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC------
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA------   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~------   76 (248)
                      ++++|+++||||+||||++++++|+++|++|++++|+.++    ..+.+   ..++.++++|++|.++++++++      
T Consensus         6 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~----~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~g   78 (257)
T 3tl3_A            6 EIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGED----VVADL---GDRARFAAADVTDEAAVASALDLAETMG   78 (257)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHH----HHHHT---CTTEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred             eecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHH----HHHhc---CCceEEEECCCCCHHHHHHHHHHHHHhC
Confidence            4789999999999999999999999999999999996431    11222   4578999999999999988876      


Q ss_pred             CCCEEEEccccCCCC--------CCCCccccchhhhHHHHHHHHHHHHhc------------CCCEEEEEeccceeccCC
Q 025755           77 GCTGVFHVACPVPVG--------KVPNPEVQLIDPAVVGTKNVLNSCVKA------------KVKRVVVVSSIGAVMLNP  136 (248)
Q Consensus        77 ~id~vi~~ag~~~~~--------~~~~~~~~~~~~n~~g~~~~~~~~~~~------------~~~~iV~vSS~~~~~~~~  136 (248)
                      ++|+||||||.....        ...+.|+..+++|+.++.++++++.+.            +.++||++||..++.+.+
T Consensus        79 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  158 (257)
T 3tl3_A           79 TLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQI  158 (257)
T ss_dssp             CEEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--CCHH
T ss_pred             CCCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcCCCC
Confidence            799999999975321        223456789999999999999888653            356999999987765543


Q ss_pred             CCCCCCccCCCCCCchhhhccccchHHHHHH----HHHHHHHHHHHhCCccEEEEccCeeecCCCCCCCCccHHHHHH-H
Q 025755          137 NWPKGQVMDEECWSDEEFCKATENYYCLAKT----IAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTINTSSLLLLG-F  211 (248)
Q Consensus       137 ~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~----~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~-~  211 (248)
                      .                     ...|+.||+    +++.++.+++++ +++||+|+||.+.+++...........+.. .
T Consensus       159 ~---------------------~~~Y~asKaa~~~~~~~la~e~~~~-gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~  216 (257)
T 3tl3_A          159 G---------------------QAAYSASKGGVVGMTLPIARDLASH-RIRVMTIAPGLFDTPLLASLPEEARASLGKQV  216 (257)
T ss_dssp             H---------------------HHHHHHHHHHHHHHHHHHHHHHGGG-TEEEEEEEECSBCCTTC---CHHHHHHHHHTS
T ss_pred             C---------------------CccHHHHHHHHHHHHHHHHHHhccc-CcEEEEEEecCccChhhhhccHHHHHHHHhcC
Confidence            2                     234999997    555555555544 599999999999999865321111111111 1


Q ss_pred             Hc-CC------------CCCCCCCchhhhhhhhhccceeE
Q 025755          212 LK-GF------------FFTTPSHSYMLERTLVLNQGVRL  238 (248)
Q Consensus       212 ~~-~~------------~l~~~~~~~~~g~~l~vd~g~~~  238 (248)
                      .. ++            ++..  +.|+||+++.||||..+
T Consensus       217 ~~~~r~~~p~dva~~v~~l~s--~~~itG~~i~vdGG~~~  254 (257)
T 3tl3_A          217 PHPSRLGNPDEYGALAVHIIE--NPMLNGEVIRLDGAIRM  254 (257)
T ss_dssp             SSSCSCBCHHHHHHHHHHHHH--CTTCCSCEEEESTTC--
T ss_pred             CCCCCccCHHHHHHHHHHHhc--CCCCCCCEEEECCCccC
Confidence            11 11            4443  37999999999999864

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=99.97  E-value=6.6e-32  Score=218.90  Aligned_cols=211  Identities=17%  Similarity=0.147  Sum_probs=147.1

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC---CCC
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA---GCT   79 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~---~id   79 (248)
                      .+++|+|+||||+||||+++++.|+++|++|++++|+.... ....+.+   ..++.++.+|++|.++++++++   ++|
T Consensus        11 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~-~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~id   86 (249)
T 3f9i_A           11 DLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKL-KSLGNAL---KDNYTIEVCNLANKEECSNLISKTSNLD   86 (249)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHHH---CSSEEEEECCTTSHHHHHHHHHTCSCCS
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHH-HHHHHHh---ccCccEEEcCCCCHHHHHHHHHhcCCCC
Confidence            36789999999999999999999999999999999976422 2222222   3478899999999999999887   689


Q ss_pred             EEEEccccCCCC----CCCCccccchhhhHHHHHHHHHHHHh----cCCCEEEEEeccceeccCCCCCCCCccCCCCCCc
Q 025755           80 GVFHVACPVPVG----KVPNPEVQLIDPAVVGTKNVLNSCVK----AKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSD  151 (248)
Q Consensus        80 ~vi~~ag~~~~~----~~~~~~~~~~~~n~~g~~~~~~~~~~----~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~  151 (248)
                      +||||||.....    ...+.+...+++|+.++.++++++.+    .+.++||++||..++.+.+..             
T Consensus        87 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-------------  153 (249)
T 3f9i_A           87 ILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAGNPGQ-------------  153 (249)
T ss_dssp             EEEECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC--CCSCS-------------
T ss_pred             EEEECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhccCCCCC-------------
Confidence            999999976543    22455678999999999988887754    466899999998877665432             


Q ss_pred             hhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCCCccH-HHHHHHHcCC------------
Q 025755          152 EEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTINTSS-LLLLGFLKGF------------  215 (248)
Q Consensus       152 ~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~~~~~-~~~~~~~~~~------------  215 (248)
                              ..|+.||++.+.+++.++.+   .++++++++||.+.+++......... .+......++            
T Consensus       154 --------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  225 (249)
T 3f9i_A          154 --------ANYCASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDKLNEKQREAIVQKIPLGTYGIPEDVAYAVA  225 (249)
T ss_dssp             --------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC------CCHHHHHHHHHHCTTCSCBCHHHHHHHHH
T ss_pred             --------chhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCccccCcccccCHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence                    33999998666555555443   35999999999999997654311111 1111111111            


Q ss_pred             CCCCCCCchhhhhhhhhccceeE
Q 025755          216 FFTTPSHSYMLERTLVLNQGVRL  238 (248)
Q Consensus       216 ~l~~~~~~~~~g~~l~vd~g~~~  238 (248)
                      ++..+...+++|+++.+|||+.+
T Consensus       226 ~l~s~~~~~~tG~~~~vdgG~~~  248 (249)
T 3f9i_A          226 FLASNNASYITGQTLHVNGGMLM  248 (249)
T ss_dssp             HHHSGGGTTCCSCEEEESTTSSC
T ss_pred             HHcCCccCCccCcEEEECCCEee
Confidence            56677778999999999999864

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=99.97  E-value=5.9e-32  Score=219.44  Aligned_cols=204  Identities=17%  Similarity=0.115  Sum_probs=145.3

Q ss_pred             CCCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-----
Q 025755            2 SGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-----   76 (248)
Q Consensus         2 ~~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-----   76 (248)
                      +++++|+++||||+||||+++++.|+++|++|++++|+...      +   .  ..+.++.+|++|.++++++++     
T Consensus         3 m~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~------~---~--~~~~~~~~D~~d~~~~~~~~~~~~~~   71 (250)
T 2fwm_X            3 MDFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ------E---Q--YPFATEVMDVADAAQVAQVCQRLLAE   71 (250)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS------S---C--CSSEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh------h---c--CCceEEEcCCCCHHHHHHHHHHHHHH
Confidence            34789999999999999999999999999999999998641      1   1  127889999999999988876     


Q ss_pred             --CCCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHH----hcCCCEEEEEeccceeccCCCCCCCCccCC
Q 025755           77 --GCTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCV----KAKVKRVVVVSSIGAVMLNPNWPKGQVMDE  146 (248)
Q Consensus        77 --~id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~----~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e  146 (248)
                        ++|+||||||.......    .+.|...+++|+.++.++++++.    +.+.++||++||..++.+.+.         
T Consensus        72 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~---------  142 (250)
T 2fwm_X           72 TERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHTPRIG---------  142 (250)
T ss_dssp             CSCCCEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTT---------
T ss_pred             cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCCC---------
Confidence              68999999997654321    23457789999999999988874    446789999999876655432         


Q ss_pred             CCCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCC--Cc-cH-HHHH-------HHH
Q 025755          147 ECWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTI--NT-SS-LLLL-------GFL  212 (248)
Q Consensus       147 ~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~--~~-~~-~~~~-------~~~  212 (248)
                                  ...|+.||+..+.+.+.++.+   .++++++|+||.++||+.....  .. .. .+..       ...
T Consensus       143 ------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p  210 (250)
T 2fwm_X          143 ------------MSAYGASKAALKSLALSVGLELAGSGVRCNVVSPGSTDTDMQRTLWVSDDAEEQRIRGFGEQFKLGIP  210 (250)
T ss_dssp             ------------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC-------------------------------
T ss_pred             ------------CchHHHHHHHHHHHHHHHHHHhCccCCEEEEEECCcccCccccccccChhHHHHHHhhhhhcccccCC
Confidence                        234999998766666666543   2699999999999999754210  00 00 1100       011


Q ss_pred             cCC------------CCCCCCCchhhhhhhhhcccee
Q 025755          213 KGF------------FFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       213 ~~~------------~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                      .++            ++.++...|++|+.+.+|||..
T Consensus       211 ~~~~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~  247 (250)
T 2fwm_X          211 LGKIARPQEIANTILFLASDLASHITLQDIVVDGGST  247 (250)
T ss_dssp             -----CHHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred             CCCCcCHHHHHHHHHHHhCccccCCCCCEEEECCCcc
Confidence            111            5666667899999999999964

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=99.97  E-value=2.6e-32  Score=224.54  Aligned_cols=214  Identities=12%  Similarity=0.066  Sum_probs=156.6

Q ss_pred             CCCCCCcEEEEEcCc--cHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC--
Q 025755            1 MSGEDKERVCVTGAG--GYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA--   76 (248)
Q Consensus         1 m~~l~~k~vlVtG~~--g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~--   76 (248)
                      |..+++|+++||||+  ||||+++++.|+++|++|++++|+..  .....+.+....+++.++.+|++|.++++++++  
T Consensus         1 M~~l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~--~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~   78 (275)
T 2pd4_A            1 MGFLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES--LEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSV   78 (275)
T ss_dssp             -CTTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT--THHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHH--HHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHH
Confidence            666889999999999  99999999999999999999999874  222222222212347889999999999888876  


Q ss_pred             -----CCCEEEEccccCCC----C----CCCCccccchhhhHHHHHHHHHHHHhc--CCCEEEEEeccceeccCCCCCCC
Q 025755           77 -----GCTGVFHVACPVPV----G----KVPNPEVQLIDPAVVGTKNVLNSCVKA--KVKRVVVVSSIGAVMLNPNWPKG  141 (248)
Q Consensus        77 -----~id~vi~~ag~~~~----~----~~~~~~~~~~~~n~~g~~~~~~~~~~~--~~~~iV~vSS~~~~~~~~~~~~~  141 (248)
                           ++|+||||||....    .    ...+.+...+++|+.++.++++++.+.  +.++||++||..+..+.+..   
T Consensus        79 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~---  155 (275)
T 2pd4_A           79 KKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYMAHY---  155 (275)
T ss_dssp             HHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTC---
T ss_pred             HHHcCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEecchhcCCCCCc---
Confidence                 68999999997643    1    123445678999999999999999876  23799999997766554332   


Q ss_pred             CccCCCCCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCCCccHHHHHHH----HcC
Q 025755          142 QVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTINTSSLLLLGF----LKG  214 (248)
Q Consensus       142 ~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~----~~~  214 (248)
                                        ..|+.||++.+.+.+.++.+   .|++|++|+||.+.|++..... ........+    ..+
T Consensus       156 ------------------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~-~~~~~~~~~~~~~p~~  216 (275)
T 2pd4_A          156 ------------------NVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIA-DFRMILKWNEINAPLR  216 (275)
T ss_dssp             ------------------HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGST-THHHHHHHHHHHSTTS
T ss_pred             ------------------hhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccchhhhcc-ccHHHHHHHHhcCCcC
Confidence                              33999998666666555543   2699999999999999754321 111111111    111


Q ss_pred             C------------CCCCCCCchhhhhhhhhccceeE
Q 025755          215 F------------FFTTPSHSYMLERTLVLNQGVRL  238 (248)
Q Consensus       215 ~------------~l~~~~~~~~~g~~l~vd~g~~~  238 (248)
                      +            ++.++...+++|+++.+|||...
T Consensus       217 ~~~~p~dva~~~~~l~s~~~~~~tG~~~~vdgg~~~  252 (275)
T 2pd4_A          217 KNVSLEEVGNAGMYLLSSLSSGVSGEVHFVDAGYHV  252 (275)
T ss_dssp             SCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             CCCCHHHHHHHHHHHhCccccCCCCCEEEECCCccc
Confidence            1            56666678999999999999764

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.97  E-value=3.8e-32  Score=224.12  Aligned_cols=215  Identities=16%  Similarity=0.107  Sum_probs=154.7

Q ss_pred             CCCCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCC---CeEEEEccCCCHHHHHHHhC-
Q 025755            1 MSGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASE---NLQLFKTDLLDYEALCAATA-   76 (248)
Q Consensus         1 m~~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~---~~~~~~~Di~d~~~~~~~~~-   76 (248)
                      |+++++|+++||||+||||++++++|+++|++|++++|+... .....+.+.....   ++.++.+|++|.++++++++ 
T Consensus         1 m~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   79 (280)
T 1xkq_A            1 MPRFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSER-LEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINS   79 (280)
T ss_dssp             -CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHH-HHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHH
Confidence            667899999999999999999999999999999999998642 2222233333233   78999999999999888775 


Q ss_pred             ------CCCEEEEccccCCCCC--------CCCccccchhhhHHHHHHHHHHHHhc----CCCEEEEEeccceeccC-CC
Q 025755           77 ------GCTGVFHVACPVPVGK--------VPNPEVQLIDPAVVGTKNVLNSCVKA----KVKRVVVVSSIGAVMLN-PN  137 (248)
Q Consensus        77 ------~id~vi~~ag~~~~~~--------~~~~~~~~~~~n~~g~~~~~~~~~~~----~~~~iV~vSS~~~~~~~-~~  137 (248)
                            ++|+||||||......        ..+.|...+++|+.++.++++++.+.    + ++||++||..+..+. +.
T Consensus        80 ~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~  158 (280)
T 1xkq_A           80 TLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-GEIVNVSSIVAGPQAQPD  158 (280)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGSSSCCCS
T ss_pred             HHHhcCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCC-CcEEEecCccccCCCCCc
Confidence                  6899999999764322        12345678999999999998888653    4 899999997765443 22


Q ss_pred             CCCCCccCCCCCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCC--Cc----cHHHH
Q 025755          138 WPKGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTI--NT----SSLLL  208 (248)
Q Consensus       138 ~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~--~~----~~~~~  208 (248)
                                           ...|+.||++.+.+.+.++.+   .|++|++|+||+++||+.....  ..    .....
T Consensus       159 ---------------------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~  217 (280)
T 1xkq_A          159 ---------------------FLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFM  217 (280)
T ss_dssp             ---------------------SHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHH
T ss_pred             ---------------------ccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCcccccccccccccchHHHH
Confidence                                 234999998666666655532   4699999999999998643210  00    01111


Q ss_pred             HHHHc----CC------------CCCCCC-CchhhhhhhhhccceeE
Q 025755          209 LGFLK----GF------------FFTTPS-HSYMLERTLVLNQGVRL  238 (248)
Q Consensus       209 ~~~~~----~~------------~l~~~~-~~~~~g~~l~vd~g~~~  238 (248)
                      .....    ++            ++.++. ..|++|+++.+|||+.+
T Consensus       218 ~~~~~~~p~~~~~~pedvA~~v~~l~s~~~~~~~tG~~i~vdgG~~~  264 (280)
T 1xkq_A          218 ASHKECIPIGAAGKPEHIANIILFLADRNLSFYILGQSIVADGGTSL  264 (280)
T ss_dssp             HHCTTTCTTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGG
T ss_pred             HHHHcCCCCCCCCCHHHHHHHHHHhcCcccccCccCCeEEECCCccc
Confidence            22111    11            555555 67999999999999764

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=99.97  E-value=6.4e-32  Score=221.07  Aligned_cols=217  Identities=12%  Similarity=0.078  Sum_probs=157.8

Q ss_pred             CCCCcEEEEEcCccH--HHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCC-CCCeEEEEccCCCHHHHHHHhC---
Q 025755            3 GEDKERVCVTGAGGY--IASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGA-SENLQLFKTDLLDYEALCAATA---   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~--iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Di~d~~~~~~~~~---   76 (248)
                      ++++|+++||||+|+  ||+++++.|+++|++|++++|+... .....+..... ..++.++.+|++|.++++++++   
T Consensus         4 ~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   82 (266)
T 3oig_A            4 SLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERL-EKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIK   82 (266)
T ss_dssp             CCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGG-HHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHH
T ss_pred             ccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHH-HHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHH
Confidence            588999999999955  9999999999999999999998532 22211112222 2378999999999999888875   


Q ss_pred             ----CCCEEEEccccCCC----C----CCCCccccchhhhHHHHHHHHHHHHhc--CCCEEEEEeccceeccCCCCCCCC
Q 025755           77 ----GCTGVFHVACPVPV----G----KVPNPEVQLIDPAVVGTKNVLNSCVKA--KVKRVVVVSSIGAVMLNPNWPKGQ  142 (248)
Q Consensus        77 ----~id~vi~~ag~~~~----~----~~~~~~~~~~~~n~~g~~~~~~~~~~~--~~~~iV~vSS~~~~~~~~~~~~~~  142 (248)
                          ++|+||||||....    .    ...+.+...+++|+.++.++++++.+.  +.++||++||..+..+.+..    
T Consensus        83 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~----  158 (266)
T 3oig_A           83 EQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGGELVMPNY----  158 (266)
T ss_dssp             HHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCCTTT----
T ss_pred             HHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEecccccccCCCc----
Confidence                68999999998652    1    112345678899999999999999876  34799999998877665432    


Q ss_pred             ccCCCCCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCCCccHHHHHHH----HcCC
Q 025755          143 VMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTINTSSLLLLGF----LKGF  215 (248)
Q Consensus       143 ~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~----~~~~  215 (248)
                                       ..|+.||++.+.+.+.++.+   .|++|++|+||.+.+++...... .......+    ..++
T Consensus       159 -----------------~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~~~~~  220 (266)
T 3oig_A          159 -----------------NVMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGISD-FNSILKDIEERAPLRR  220 (266)
T ss_dssp             -----------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTT-HHHHHHHHHHHSTTSS
T ss_pred             -----------------chhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccccccccc-hHHHHHHHHhcCCCCC
Confidence                             33999997555555554433   25999999999999987654321 11111111    1111


Q ss_pred             ------------CCCCCCCchhhhhhhhhccceeEEEee
Q 025755          216 ------------FFTTPSHSYMLERTLVLNQGVRLYRCK  242 (248)
Q Consensus       216 ------------~l~~~~~~~~~g~~l~vd~g~~~~~~~  242 (248)
                                  ++..+...+++|+++.+|||+......
T Consensus       221 ~~~p~dva~~v~~l~s~~~~~~tG~~i~vdGG~~~~~~~  259 (266)
T 3oig_A          221 TTTPEEVGDTAAFLFSDMSRGITGENLHVDSGFHITARL  259 (266)
T ss_dssp             CCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCCCC
T ss_pred             CCCHHHHHHHHHHHcCCchhcCcCCEEEECCCeEEeeec
Confidence                        666777899999999999998865443

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=99.97  E-value=1.1e-32  Score=225.61  Aligned_cols=204  Identities=20%  Similarity=0.182  Sum_probs=149.0

Q ss_pred             CCCCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC----
Q 025755            1 MSGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA----   76 (248)
Q Consensus         1 m~~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~----   76 (248)
                      |+++++|+++||||+||||++++++|+++|++|++++|+....            .....+.+|++|.++++++++    
T Consensus        23 m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~------------~~~~~~~~Dv~~~~~~~~~~~~~~~   90 (266)
T 3uxy_A           23 MQGFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGI------------AADLHLPGDLREAAYADGLPGAVAA   90 (266)
T ss_dssp             ---CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTS------------CCSEECCCCTTSHHHHHHHHHHHHH
T ss_pred             hhCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH------------HhhhccCcCCCCHHHHHHHHHHHHH
Confidence            4567899999999999999999999999999999999876421            112345799999998877764    


Q ss_pred             ---CCCEEEEccccCCCCC----CCCccccchhhhHHHHHHHHHHHH----hcCCCEEEEEeccceeccCCCCCCCCccC
Q 025755           77 ---GCTGVFHVACPVPVGK----VPNPEVQLIDPAVVGTKNVLNSCV----KAKVKRVVVVSSIGAVMLNPNWPKGQVMD  145 (248)
Q Consensus        77 ---~id~vi~~ag~~~~~~----~~~~~~~~~~~n~~g~~~~~~~~~----~~~~~~iV~vSS~~~~~~~~~~~~~~~~~  145 (248)
                         ++|+||||||......    ..+.|+..+++|+.|+.++++++.    +.+.++||++||..++.+.+.        
T Consensus        91 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~--------  162 (266)
T 3uxy_A           91 GLGRLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGLRPGPG--------  162 (266)
T ss_dssp             HHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTBCCTT--------
T ss_pred             hcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCCC--------
Confidence               6899999999875432    234456789999999999998884    446789999999887665543        


Q ss_pred             CCCCCchhhhccccchHHHHHHHHHHHHHHHHHhC---CccEEEEccCeeecCCCCCC---CC-ccHHHHHHHHcC----
Q 025755          146 EECWSDEEFCKATENYYCLAKTIAEIQALEYAKRG---ELDIVTVCPSIVIGPMLQPT---IN-TSSLLLLGFLKG----  214 (248)
Q Consensus       146 e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~---~i~v~~vrpg~i~g~~~~~~---~~-~~~~~~~~~~~~----  214 (248)
                                   ...|+.||++.+.+.+.++.++   |++|++|+||.++||+....   .. ........+...    
T Consensus       163 -------------~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~~  229 (266)
T 3uxy_A          163 -------------HALYCLTKAALASLTQCMGMDHAPQGIRINAVCPNEVNTPMLRTGFAKRGFDPDRAVAELGRTVPLG  229 (266)
T ss_dssp             -------------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCHHHHHHHHHTTCCHHHHHHHHHTTSTTS
T ss_pred             -------------ChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCCCcchHhhhhhhcccccchHHHHHHHhcCCCC
Confidence                         2349999976666555554432   69999999999999864211   00 001111111111    


Q ss_pred             ------------CCCCCCCCchhhhhhhhhcccee
Q 025755          215 ------------FFFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       215 ------------~~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                                  .++.++...|++|+++.||||..
T Consensus       230 r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~  264 (266)
T 3uxy_A          230 RIAEPEDIADVVLFLASDAARYLCGSLVEVNGGKA  264 (266)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTCC
T ss_pred             CCcCHHHHHHHHHHHhCchhcCCcCCEEEECcCEe
Confidence                        16777888999999999999975

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.97  E-value=3.9e-32  Score=222.59  Aligned_cols=212  Identities=17%  Similarity=0.159  Sum_probs=153.1

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhh-cCCCCCeEEEEccCCCHHHHHHHhC-----
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKL-EGASENLQLFKTDLLDYEALCAATA-----   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~Di~d~~~~~~~~~-----   76 (248)
                      ++++|+++||||+||||+++++.|+++|++|++++|+.... ....+.+ .....++.++.+|++|.++++++++     
T Consensus        18 ~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~-~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   96 (267)
T 1vl8_A           18 DLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEA-SEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEK   96 (267)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            37889999999999999999999999999999999986422 2222222 1123578899999999999888876     


Q ss_pred             --CCCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHHh----cCCCEEEEEeccc-eeccCCCCCCCCccC
Q 025755           77 --GCTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCVK----AKVKRVVVVSSIG-AVMLNPNWPKGQVMD  145 (248)
Q Consensus        77 --~id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~~----~~~~~iV~vSS~~-~~~~~~~~~~~~~~~  145 (248)
                        ++|+||||||.......    .+.|...+++|+.|+.++++++.+    .+.++||++||.. +..+.+.        
T Consensus        97 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~--------  168 (267)
T 1vl8_A           97 FGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPN--------  168 (267)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCSSS--------
T ss_pred             cCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcchhccCCCC--------
Confidence              68999999997654321    234567899999999998887754    4668999999976 5444332        


Q ss_pred             CCCCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCCCccHHHHHHHHc----CC---
Q 025755          146 EECWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLK----GF---  215 (248)
Q Consensus       146 e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~----~~---  215 (248)
                                   ...|+.||++.+.+.+.++.+   .|++|++|+||++.+++...... .......+..    ++   
T Consensus       169 -------------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~p~~~~~~  234 (267)
T 1vl8_A          169 -------------ISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFS-DPEKLDYMLKRIPLGRTGV  234 (267)
T ss_dssp             -------------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHT-CHHHHHHHHHTCTTSSCBC
T ss_pred             -------------ChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcccccccccc-ChHHHHHHHhhCCCCCCcC
Confidence                         234999998666666655543   36999999999999987432100 0111111111    11   


Q ss_pred             ---------CCCCCCCchhhhhhhhhcccee
Q 025755          216 ---------FFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       216 ---------~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                               ++.++...|++|+++.+|||+.
T Consensus       235 p~dvA~~v~~l~s~~~~~itG~~i~vdGG~~  265 (267)
T 1vl8_A          235 PEDLKGVAVFLASEEAKYVTGQIIFVDGGWT  265 (267)
T ss_dssp             GGGGHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHHHHHHcCccccCCcCCeEEECCCCC
Confidence                     5566667899999999999964

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=99.97  E-value=5.3e-32  Score=219.99  Aligned_cols=211  Identities=17%  Similarity=0.080  Sum_probs=153.6

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCC-CCCeEEEEccC--CCHHHHHHHhC----
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGA-SENLQLFKTDL--LDYEALCAATA----   76 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Di--~d~~~~~~~~~----   76 (248)
                      +++|+++||||+||||+++++.|+++|++|++++|+.+.. ....+.+... ..++.++.+|+  +|.++++++++    
T Consensus        10 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (252)
T 3f1l_A           10 LNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKL-RQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAV   88 (252)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHH
Confidence            7889999999999999999999999999999999986432 2222222221 23788999999  99988888775    


Q ss_pred             ---CCCEEEEccccCCCC-----CCCCccccchhhhHHHHHHHHHHHH----hcCCCEEEEEeccceeccCCCCCCCCcc
Q 025755           77 ---GCTGVFHVACPVPVG-----KVPNPEVQLIDPAVVGTKNVLNSCV----KAKVKRVVVVSSIGAVMLNPNWPKGQVM  144 (248)
Q Consensus        77 ---~id~vi~~ag~~~~~-----~~~~~~~~~~~~n~~g~~~~~~~~~----~~~~~~iV~vSS~~~~~~~~~~~~~~~~  144 (248)
                         ++|+||||||.....     ...+.|+..+++|+.++.++++++.    +.+.++||++||..+..+.+..      
T Consensus        89 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~------  162 (252)
T 3f1l_A           89 NYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANW------  162 (252)
T ss_dssp             HCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGTSCCTTC------
T ss_pred             hCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhhccCCCCC------
Confidence               689999999975321     1123456789999999999988884    4467899999998877665432      


Q ss_pred             CCCCCCchhhhccccchHHHHHHHHHHHHHHHHHhC--CccEEEEccCeeecCCCCCC---CC----ccHHHHHHHHcCC
Q 025755          145 DEECWSDEEFCKATENYYCLAKTIAEIQALEYAKRG--ELDIVTVCPSIVIGPMLQPT---IN----TSSLLLLGFLKGF  215 (248)
Q Consensus       145 ~e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~--~i~v~~vrpg~i~g~~~~~~---~~----~~~~~~~~~~~~~  215 (248)
                                     ..|+.||++.+.+.+.++.++  ++|||+|+||.+.+++....   ..    ..+.-+.....  
T Consensus       163 ---------------~~Y~asK~a~~~l~~~la~e~~~~irvn~v~PG~v~t~~~~~~~~~~~~~~~~~p~dva~~~~--  225 (252)
T 3f1l_A          163 ---------------GAYAASKFATEGMMQVLADEYQQRLRVNCINPGGTRTAMRASAFPTEDPQKLKTPADIMPLYL--  225 (252)
T ss_dssp             ---------------HHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECCSBSSHHHHHHCTTCCGGGSBCTGGGHHHHH--
T ss_pred             ---------------chhHHHHHHHHHHHHHHHHHhcCCcEEEEEecCcccCchhhhhCCccchhccCCHHHHHHHHH--
Confidence                           339999987777777777654  39999999999998753210   00    00111111111  


Q ss_pred             CCCCCCCchhhhhhhhhccceeE
Q 025755          216 FFTTPSHSYMLERTLVLNQGVRL  238 (248)
Q Consensus       216 ~l~~~~~~~~~g~~l~vd~g~~~  238 (248)
                      |+.++...|+||+++.||||...
T Consensus       226 ~L~s~~~~~itG~~i~vdgG~~~  248 (252)
T 3f1l_A          226 WLMGDDSRRKTGMTFDAQPGRKP  248 (252)
T ss_dssp             HHHSGGGTTCCSCEEESSCC---
T ss_pred             HHcCccccCCCCCEEEeCCCcCC
Confidence            67777889999999999999763

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=99.97  E-value=1e-31  Score=217.38  Aligned_cols=210  Identities=14%  Similarity=0.092  Sum_probs=142.2

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEE-cCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-----
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTV-RDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-----   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-----   76 (248)
                      ++++|+++||||+||||++++++|+++|++|++++ |+.. ......+.+.....++.++.+|++|.++++++++     
T Consensus         2 ~l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   80 (247)
T 2hq1_A            2 QLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPAST-SLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDA   80 (247)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCS-HHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHH-HHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHh
Confidence            38899999999999999999999999999999984 5543 2223333333334678999999999999988876     


Q ss_pred             --CCCEEEEccccCCCC----CCCCccccchhhhHHHHHHHHHHHHh----cCCCEEEEEeccceeccCCCCCCCCccCC
Q 025755           77 --GCTGVFHVACPVPVG----KVPNPEVQLIDPAVVGTKNVLNSCVK----AKVKRVVVVSSIGAVMLNPNWPKGQVMDE  146 (248)
Q Consensus        77 --~id~vi~~ag~~~~~----~~~~~~~~~~~~n~~g~~~~~~~~~~----~~~~~iV~vSS~~~~~~~~~~~~~~~~~e  146 (248)
                        ++|+||||||.....    ...+.+...+++|+.++.++++++.+    .+.++||++||..+.++.+..        
T Consensus        81 ~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~--------  152 (247)
T 2hq1_A           81 FGRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIGNAGQ--------  152 (247)
T ss_dssp             HSCCCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC---------C--------
T ss_pred             cCCCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCCC--------
Confidence              789999999976432    12345678899999998888887764    467899999998776665432        


Q ss_pred             CCCCchhhhccccchHHHHHHHHHHHHHHHHHhC---CccEEEEccCeeecCCCCCCCCccHHHHHHHHcCC--------
Q 025755          147 ECWSDEEFCKATENYYCLAKTIAEIQALEYAKRG---ELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKGF--------  215 (248)
Q Consensus       147 ~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~---~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~~~--------  215 (248)
                                   ..|+.||++.+.+++.++.+.   ++++++++||.+.+++....   .......+..+.        
T Consensus       153 -------------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~---~~~~~~~~~~~~~~~~~~~~  216 (247)
T 2hq1_A          153 -------------ANYAASKAGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTDVL---PDKVKEMYLNNIPLKRFGTP  216 (247)
T ss_dssp             -------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTS---CHHHHHHHHTTSTTSSCBCH
T ss_pred             -------------cHhHHHHHHHHHHHHHHHHHHHHcCcEEEEEEEEEEeccchhhc---chHHHHHHHhhCCCCCCCCH
Confidence                         339999987777766665442   69999999999998753321   111111111111        


Q ss_pred             --------CCCCCCCchhhhhhhhhcccee
Q 025755          216 --------FFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       216 --------~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                              ++..+...+++|+++.+|||..
T Consensus       217 ~dva~~~~~l~~~~~~~~~G~~~~v~gG~~  246 (247)
T 2hq1_A          217 EEVANVVGFLASDDSNYITGQVINIDGGLV  246 (247)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEESTTC-
T ss_pred             HHHHHHHHHHcCcccccccCcEEEeCCCcc
Confidence                    3444556788999999999974

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=99.97  E-value=1.9e-32  Score=223.76  Aligned_cols=212  Identities=15%  Similarity=0.102  Sum_probs=155.3

Q ss_pred             CCCCcEEEEEcCc--cHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC----
Q 025755            3 GEDKERVCVTGAG--GYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA----   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~--g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~----   76 (248)
                      .+++|+++||||+  ||||+++++.|+++|++|++++|+..  .....+.+....+.+.++.+|++|.++++++++    
T Consensus         5 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~--~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   82 (261)
T 2wyu_A            5 DLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAER--LRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKE   82 (261)
T ss_dssp             CCTTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGG--GHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHH--HHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHHHH
Confidence            3678999999999  99999999999999999999999863  222222222212347889999999999888876    


Q ss_pred             ---CCCEEEEccccCCC----C----CCCCccccchhhhHHHHHHHHHHHHhc--CCCEEEEEeccceeccCCCCCCCCc
Q 025755           77 ---GCTGVFHVACPVPV----G----KVPNPEVQLIDPAVVGTKNVLNSCVKA--KVKRVVVVSSIGAVMLNPNWPKGQV  143 (248)
Q Consensus        77 ---~id~vi~~ag~~~~----~----~~~~~~~~~~~~n~~g~~~~~~~~~~~--~~~~iV~vSS~~~~~~~~~~~~~~~  143 (248)
                         ++|+||||||....    .    ...+.+...+++|+.++.++++++.+.  +.++||++||..+..+.+..     
T Consensus        83 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~-----  157 (261)
T 2wyu_A           83 AFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVVPKY-----  157 (261)
T ss_dssp             HHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBCTTC-----
T ss_pred             HcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccCCEEEEEecccccCCCCCc-----
Confidence               68999999997642    1    123445778999999999999999876  23699999997766554332     


Q ss_pred             cCCCCCCchhhhccccchHHHHHHHHHHHHHHHHHhC---CccEEEEccCeeecCCCCCCCCccHHHHHHHH----cCC-
Q 025755          144 MDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKRG---ELDIVTVCPSIVIGPMLQPTINTSSLLLLGFL----KGF-  215 (248)
Q Consensus       144 ~~e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~---~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~----~~~-  215 (248)
                                      ..|+.||++.+.+.+.++.+.   +++||+|+||+++||+..... ........+.    .++ 
T Consensus       158 ----------------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~-~~~~~~~~~~~~~p~~~~  220 (261)
T 2wyu_A          158 ----------------NVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIP-GFTKMYDRVAQTAPLRRN  220 (261)
T ss_dssp             ----------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGGCT-THHHHHHHHHHHSTTSSC
T ss_pred             ----------------hHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhhcc-ccHHHHHHHHhcCCCCCC
Confidence                            339999987666666655442   699999999999998754321 1111111111    111 


Q ss_pred             -----------CCCCCCCchhhhhhhhhccceeE
Q 025755          216 -----------FFTTPSHSYMLERTLVLNQGVRL  238 (248)
Q Consensus       216 -----------~l~~~~~~~~~g~~l~vd~g~~~  238 (248)
                                 ++.++...+++|+++.+|||+.+
T Consensus       221 ~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~~  254 (261)
T 2wyu_A          221 ITQEEVGNLGLFLLSPLASGITGEVVYVDAGYHI  254 (261)
T ss_dssp             CCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             CCHHHHHHHHHHHcChhhcCCCCCEEEECCCccc
Confidence                       56666678999999999999764

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=99.97  E-value=8.8e-32  Score=219.31  Aligned_cols=213  Identities=15%  Similarity=0.121  Sum_probs=156.0

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-------
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-------   76 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-------   76 (248)
                      +++|+++||||+||||++++++|+++|++|++++|+... .....+.+.....++.++.+|++|.++++++++       
T Consensus        11 l~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~-~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (260)
T 3awd_A           11 LDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAM-ATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQEG   89 (260)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHH-HHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            678999999999999999999999999999999998632 222233333334679999999999999988876       


Q ss_pred             CCCEEEEccccCC-CCCC----CCccccchhhhHHHHHHHHHHHHh----cCCCEEEEEeccceeccCCCCCCCCccCCC
Q 025755           77 GCTGVFHVACPVP-VGKV----PNPEVQLIDPAVVGTKNVLNSCVK----AKVKRVVVVSSIGAVMLNPNWPKGQVMDEE  147 (248)
Q Consensus        77 ~id~vi~~ag~~~-~~~~----~~~~~~~~~~n~~g~~~~~~~~~~----~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~  147 (248)
                      ++|+||||||... ....    .+.+...+++|+.++.++++++.+    .+.++||++||..+..+.+..         
T Consensus        90 ~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~---------  160 (260)
T 3awd_A           90 RVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVNRPQ---------  160 (260)
T ss_dssp             CCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSS---------
T ss_pred             CCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchhcccCCCC---------
Confidence            6899999999765 2211    223467899999999999888765    367899999997765443221         


Q ss_pred             CCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCCCccHHHHHHHHcCC---------
Q 025755          148 CWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKGF---------  215 (248)
Q Consensus       148 ~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~~~---------  215 (248)
                                +...|+.||++.+.+++.++.+   .++++++||||+++||+..... ..+.+...+..+.         
T Consensus       161 ----------~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  229 (260)
T 3awd_A          161 ----------QQAAYNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTRFGM-EKPELYDAWIAGTPMGRVGQPD  229 (260)
T ss_dssp             ----------CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTHHHH-TCHHHHHHHHHTCTTSSCBCHH
T ss_pred             ----------CccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchhhccc-CChHHHHHHHhcCCcCCCCCHH
Confidence                      1234999999888887777665   4699999999999999764110 0112222222111         


Q ss_pred             -------CCCCCCCchhhhhhhhhcccee
Q 025755          216 -------FFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       216 -------~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                             ++..+...+++|+++.+|||..
T Consensus       230 dva~~~~~l~~~~~~~~~G~~~~v~gg~~  258 (260)
T 3awd_A          230 EVASVVQFLASDAASLMTGAIVNVDAGFT  258 (260)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred             HHHHHHHHHhCchhccCCCcEEEECCcee
Confidence                   4445556789999999999964

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=99.97  E-value=4.1e-32  Score=221.37  Aligned_cols=212  Identities=16%  Similarity=0.151  Sum_probs=153.6

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCch-hhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-------
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDE-KNAHLKKLEGASENLQLFKTDLLDYEALCAATA-------   76 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-------   76 (248)
                      ++|+++||||+||||+++++.|+++|++|++++|+.... .....+.+.....++.++.+|++|.++++++++       
T Consensus         1 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   80 (258)
T 3a28_C            1 MSKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLG   80 (258)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            368999999999999999999999999999999986431 222333344445678999999999999888876       


Q ss_pred             CCCEEEEccccCCCCC----CCCccccchhhhHHHHHHHHHHHHhc----CC-CEEEEEeccceeccCCCCCCCCccCCC
Q 025755           77 GCTGVFHVACPVPVGK----VPNPEVQLIDPAVVGTKNVLNSCVKA----KV-KRVVVVSSIGAVMLNPNWPKGQVMDEE  147 (248)
Q Consensus        77 ~id~vi~~ag~~~~~~----~~~~~~~~~~~n~~g~~~~~~~~~~~----~~-~~iV~vSS~~~~~~~~~~~~~~~~~e~  147 (248)
                      ++|+||||||......    ..+.|...+++|+.++.++++++.+.    +. ++||++||..++.+.+..         
T Consensus        81 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~---------  151 (258)
T 3a28_C           81 GFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQGFPIL---------  151 (258)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTSCCTTC---------
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhccCCCCc---------
Confidence            7899999999765432    12345678999999999988888653    55 899999998776554332         


Q ss_pred             CCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCC--------CccHHHHHHHHc---
Q 025755          148 CWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTI--------NTSSLLLLGFLK---  213 (248)
Q Consensus       148 ~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~--------~~~~~~~~~~~~---  213 (248)
                                  ..|+.||+..+.+.+.++.+   .+++||+|+||.+.+++.....        .........+..   
T Consensus       152 ------------~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p  219 (258)
T 3a28_C          152 ------------SAYSTTKFAVRGLTQAAAQELAPKGHTVNAYAPGIVGTGMWEQIDAELSKINGKPIGENFKEYSSSIA  219 (258)
T ss_dssp             ------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSHHHHHHHHHHHHHHCCCTTHHHHHHHTTCT
T ss_pred             ------------hhHHHHHHHHHHHHHHHHHHHHhhCeEEEEEECCccCChhhhhhhhhhccccCCchHHHHHHHHhcCC
Confidence                        33999997666555555433   2599999999999998632100        000111111111   


Q ss_pred             -CC------------CCCCCCCchhhhhhhhhcccee
Q 025755          214 -GF------------FFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       214 -~~------------~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                       ++            ++.++...|++|+++.+|||+.
T Consensus       220 ~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~  256 (258)
T 3a28_C          220 LGRPSVPEDVAGLVSFLASENSNYVTGQVMLVDGGML  256 (258)
T ss_dssp             TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSSC
T ss_pred             CCCccCHHHHHHHHHHHhCcccCCCCCCEEEECCCEe
Confidence             11            6667777899999999999964

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=99.97  E-value=3.7e-32  Score=221.26  Aligned_cols=210  Identities=14%  Similarity=0.077  Sum_probs=154.1

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-------
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-------   76 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-------   76 (248)
                      |++|+++||||+||||+++++.|+++|++|++++|+..   ....+.+.....++.++.+|++|.++++++++       
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~---~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   78 (255)
T 2q2v_A            2 LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP---APALAEIARHGVKAVHHPADLSDVAQIEALFALAEREFG   78 (255)
T ss_dssp             CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC---HHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch---HHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            67899999999999999999999999999999999864   22223333334578899999999999998887       


Q ss_pred             CCCEEEEccccCCCCC----CCCccccchhhhHHHHHHHHHHH----HhcCCCEEEEEeccceeccCCCCCCCCccCCCC
Q 025755           77 GCTGVFHVACPVPVGK----VPNPEVQLIDPAVVGTKNVLNSC----VKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEEC  148 (248)
Q Consensus        77 ~id~vi~~ag~~~~~~----~~~~~~~~~~~n~~g~~~~~~~~----~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~  148 (248)
                      ++|+||||||......    ..+.+...+++|+.++.++++++    ++.+.++||++||..++.+.+.           
T Consensus        79 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-----------  147 (255)
T 2q2v_A           79 GVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHGLVGSTG-----------  147 (255)
T ss_dssp             SCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTT-----------
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcCchhccCCCC-----------
Confidence            7999999999764321    12345678999999877666655    5556789999999876655432           


Q ss_pred             CCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCCCccHHH-------HHHH-Hc----
Q 025755          149 WSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTINTSSLL-------LLGF-LK----  213 (248)
Q Consensus       149 ~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~~~~~~~-------~~~~-~~----  213 (248)
                                ...|+.||+..+.+.+.++.+   .++++++|+||.++||+...........       ...+ ..    
T Consensus       148 ----------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~  217 (255)
T 2q2v_A          148 ----------KAAYVAAKHGVVGLTKVVGLETATSNVTCNAICPGWVLTPLVQKQIDDRAANGGDPLQAQHDLLAEKQPS  217 (255)
T ss_dssp             ----------BHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEESSBCCHHHHHHHHHHHHHTCCHHHHHHHHHTTTCTT
T ss_pred             ----------chhHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcCcchhhhcccccccccchHHHHHHHHhccCCC
Confidence                      234999998777777776654   3699999999999998643110000010       0111 11    


Q ss_pred             CC------------CCCCCCCchhhhhhhhhcccee
Q 025755          214 GF------------FFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       214 ~~------------~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                      ++            ++.++...|++|+.+.+|||+.
T Consensus       218 ~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG~~  253 (255)
T 2q2v_A          218 LAFVTPEHLGELVLFLCSEAGSQVRGAAWNVDGGWL  253 (255)
T ss_dssp             CCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred             CCCcCHHHHHHHHHHHhCCccCCCCCCEEEECCCcc
Confidence            11            5666667899999999999964

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=99.97  E-value=4.9e-32  Score=222.55  Aligned_cols=211  Identities=16%  Similarity=0.163  Sum_probs=149.6

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-------
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-------   76 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-------   76 (248)
                      .++|+++||||+||||++++++|+++|++|++..+...+......+.+.....++.++.+|++|.++++++++       
T Consensus        24 ~~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  103 (272)
T 4e3z_A           24 SDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQFG  103 (272)
T ss_dssp             CCSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence            3578999999999999999999999999998875443333333334444445689999999999999888876       


Q ss_pred             CCCEEEEccccCCCCC-----CCCccccchhhhHHHHHHHHHHHHhc-------CCCEEEEEeccceeccCCCCCCCCcc
Q 025755           77 GCTGVFHVACPVPVGK-----VPNPEVQLIDPAVVGTKNVLNSCVKA-------KVKRVVVVSSIGAVMLNPNWPKGQVM  144 (248)
Q Consensus        77 ~id~vi~~ag~~~~~~-----~~~~~~~~~~~n~~g~~~~~~~~~~~-------~~~~iV~vSS~~~~~~~~~~~~~~~~  144 (248)
                      ++|+||||||......     ..+.+...+++|+.++.++++++.+.       +.++||++||..++.+.+..      
T Consensus       104 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~------  177 (272)
T 4e3z_A          104 RLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSATQ------  177 (272)
T ss_dssp             CCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCCTTT------
T ss_pred             CCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCCCCC------
Confidence            6899999999865421     23445678999999999998887654       35799999998877655310      


Q ss_pred             CCCCCCchhhhccccchHHHHHHHHHHHHHHHHHhC---CccEEEEccCeeecCCCCCCC--Cc--------------cH
Q 025755          145 DEECWSDEEFCKATENYYCLAKTIAEIQALEYAKRG---ELDIVTVCPSIVIGPMLQPTI--NT--------------SS  205 (248)
Q Consensus       145 ~e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~---~i~v~~vrpg~i~g~~~~~~~--~~--------------~~  205 (248)
                                    ...|+.||++.+.+++.++.+.   |+++++|+||.+++++.....  ..              .+
T Consensus       178 --------------~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (272)
T 4e3z_A          178 --------------YVDYAASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHASGGLPDRAREMAPSVPMQRAGMP  243 (272)
T ss_dssp             --------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC------------------CCTTSSCBCH
T ss_pred             --------------cchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCcccccCChHHHHHHhhcCCcCCCcCH
Confidence                          1239999987766666555432   699999999999998754310  00              01


Q ss_pred             HHHHHHHcCCCCCCCCCchhhhhhhhhccce
Q 025755          206 LLLLGFLKGFFFTTPSHSYMLERTLVLNQGV  236 (248)
Q Consensus       206 ~~~~~~~~~~~l~~~~~~~~~g~~l~vd~g~  236 (248)
                      .-+.....  ++..+...+++|+++.||||.
T Consensus       244 edvA~~i~--~l~s~~~~~~tG~~i~vdgG~  272 (272)
T 4e3z_A          244 EEVADAIL--YLLSPSASYVTGSILNVSGGR  272 (272)
T ss_dssp             HHHHHHHH--HHHSGGGTTCCSCEEEESTTC
T ss_pred             HHHHHHHH--HHhCCccccccCCEEeecCCC
Confidence            11111111  566677889999999999984

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=99.97  E-value=3.8e-32  Score=222.52  Aligned_cols=213  Identities=14%  Similarity=0.090  Sum_probs=160.8

Q ss_pred             CCCCcEEEEEcCc--cHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcC-CCCCeEEEEccCCCHHHHHHHhC---
Q 025755            3 GEDKERVCVTGAG--GYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEG-ASENLQLFKTDLLDYEALCAATA---   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~--g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Di~d~~~~~~~~~---   76 (248)
                      ++++|+++||||+  +|||++++++|+++|++|++++|+..+......+++.. ...++.++++|++|.++++++++   
T Consensus        17 ~l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   96 (267)
T 3gdg_A           17 SLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDVV   96 (267)
T ss_dssp             CCTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHHH
T ss_pred             CcCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHHH
Confidence            4789999999999  99999999999999999999998876443333333322 24679999999999999888875   


Q ss_pred             ----CCCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHH----hcCCCEEEEEeccceeccCCCCCCCCcc
Q 025755           77 ----GCTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCV----KAKVKRVVVVSSIGAVMLNPNWPKGQVM  144 (248)
Q Consensus        77 ----~id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~----~~~~~~iV~vSS~~~~~~~~~~~~~~~~  144 (248)
                          ++|+||||||.......    .+.+...+++|+.++.++++++.    +.+.++||++||..+..+... .     
T Consensus        97 ~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-~-----  170 (267)
T 3gdg_A           97 ADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIANFP-Q-----  170 (267)
T ss_dssp             HHTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCSS-S-----
T ss_pred             HHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCceEEEEccccccccCCC-C-----
Confidence                57999999998754422    23456789999999999888874    446689999999876654310 0     


Q ss_pred             CCCCCCchhhhccccchHHHHHHHHHHHHHHHHHhC--CccEEEEccCeeecCCCCCCCCccHHHHHHHHcC----C---
Q 025755          145 DEECWSDEEFCKATENYYCLAKTIAEIQALEYAKRG--ELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKG----F---  215 (248)
Q Consensus       145 ~e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~--~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~~----~---  215 (248)
                                   ....|+.||++.+.+++.++.++  .+++++|+||.+.+++.....   ......+...    +   
T Consensus       171 -------------~~~~Y~~sK~a~~~~~~~la~e~~~~i~v~~v~PG~v~t~~~~~~~---~~~~~~~~~~~~~~r~~~  234 (267)
T 3gdg_A          171 -------------EQTSYNVAKAGCIHMARSLANEWRDFARVNSISPGYIDTGLSDFVP---KETQQLWHSMIPMGRDGL  234 (267)
T ss_dssp             -------------CCHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEEECCEECSCGGGSC---HHHHHHHHTTSTTSSCEE
T ss_pred             -------------CCCcchHHHHHHHHHHHHHHHHhccCcEEEEEECCccccchhhhCC---HHHHHHHHhcCCCCCCcC
Confidence                         12349999988888777777654  289999999999998764321   1111111111    1   


Q ss_pred             ---------CCCCCCCchhhhhhhhhcccee
Q 025755          216 ---------FFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       216 ---------~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                               ++.++.+.|+||+++.||||+.
T Consensus       235 ~~dva~~~~~l~s~~~~~itG~~i~vdgG~~  265 (267)
T 3gdg_A          235 AKELKGAYVYFASDASTYTTGADLLIDGGYT  265 (267)
T ss_dssp             THHHHHHHHHHHSTTCTTCCSCEEEESTTGG
T ss_pred             HHHHHhHhheeecCccccccCCEEEECCcee
Confidence                     6778888999999999999985

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=99.97  E-value=4.2e-32  Score=222.53  Aligned_cols=214  Identities=15%  Similarity=0.058  Sum_probs=155.2

Q ss_pred             CCCCcEEEEEcCc--cHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC----
Q 025755            3 GEDKERVCVTGAG--GYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA----   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~--g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~----   76 (248)
                      .+++|+++||||+  ||||+++++.|+++|++|++++|+..  .....+.+....+++.++.+|++|.++++++++    
T Consensus        11 ~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   88 (271)
T 3ek2_A           11 FLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDR--FKDRITEFAAEFGSELVFPCDVADDAQIDALFASLKT   88 (271)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGG--GHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchh--hHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHHH
Confidence            4689999999999  99999999999999999999999843  223333333333468899999999999988876    


Q ss_pred             ---CCCEEEEccccCCC----C-----CCCCccccchhhhHHHHHHHHHHHHhc--CCCEEEEEeccceeccCCCCCCCC
Q 025755           77 ---GCTGVFHVACPVPV----G-----KVPNPEVQLIDPAVVGTKNVLNSCVKA--KVKRVVVVSSIGAVMLNPNWPKGQ  142 (248)
Q Consensus        77 ---~id~vi~~ag~~~~----~-----~~~~~~~~~~~~n~~g~~~~~~~~~~~--~~~~iV~vSS~~~~~~~~~~~~~~  142 (248)
                         ++|+||||||....    .     ...+.+...+++|+.++.++++++.+.  +.++||++||..+..+.+...   
T Consensus        89 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~---  165 (271)
T 3ek2_A           89 HWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERAIPNYN---  165 (271)
T ss_dssp             HCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTTT---
T ss_pred             HcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEeccccccCCCCcc---
Confidence               57999999998653    1     112345678999999999999999876  346999999988776655433   


Q ss_pred             ccCCCCCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCCCccHHHHHHHH----cCC
Q 025755          143 VMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTINTSSLLLLGFL----KGF  215 (248)
Q Consensus       143 ~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~----~~~  215 (248)
                                        .|+.||++.+.+.+.++.+   .|++|++|+||.+.+++..... ..........    .++
T Consensus       166 ------------------~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~-~~~~~~~~~~~~~~~~~  226 (271)
T 3ek2_A          166 ------------------TMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGIK-SFGKILDFVESNSPLKR  226 (271)
T ss_dssp             ------------------HHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CCCH-HHHHHHHHHHHHSTTSS
T ss_pred             ------------------chhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhccc-chHHHHHHHHhcCCcCC
Confidence                              3999997666655555543   3699999999999999865421 1111111111    111


Q ss_pred             ------------CCCCCCCchhhhhhhhhccceeEEE
Q 025755          216 ------------FFTTPSHSYMLERTLVLNQGVRLYR  240 (248)
Q Consensus       216 ------------~l~~~~~~~~~g~~l~vd~g~~~~~  240 (248)
                                  ++.++...+++|+++.+|||+.+..
T Consensus       227 ~~~pedva~~i~~l~s~~~~~~tG~~i~vdgG~~~~~  263 (271)
T 3ek2_A          227 NVTIEQVGNAGAFLLSDLASGVTAEVMHVDSGFNAVV  263 (271)
T ss_dssp             CCCHHHHHHHHHHHHSGGGTTCCSEEEEESTTGGGBC
T ss_pred             CCCHHHHHHHHHHHcCcccCCeeeeEEEECCCeeeeh
Confidence                        6777778999999999999987654

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=99.97  E-value=6.3e-32  Score=219.50  Aligned_cols=210  Identities=15%  Similarity=0.102  Sum_probs=155.7

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-------
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-------   76 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-------   76 (248)
                      +++|+++||||+||||+++++.|+++|++|++++|+... .....+.+.....++.++.+|++|.++++++++       
T Consensus         9 ~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   87 (255)
T 1fmc_A            9 LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADA-ANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLG   87 (255)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHH-HHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHH-HHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence            678999999999999999999999999999999998642 222233333334678899999999999998876       


Q ss_pred             CCCEEEEccccCCCCCC---CCccccchhhhHHHHHHHHHHHH----hcCCCEEEEEeccceeccCCCCCCCCccCCCCC
Q 025755           77 GCTGVFHVACPVPVGKV---PNPEVQLIDPAVVGTKNVLNSCV----KAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECW  149 (248)
Q Consensus        77 ~id~vi~~ag~~~~~~~---~~~~~~~~~~n~~g~~~~~~~~~----~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~  149 (248)
                      ++|+||||||.......   .+.+...+++|+.++.++++++.    +.+.++||++||..++.+.+.            
T Consensus        88 ~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~------------  155 (255)
T 1fmc_A           88 KVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNIN------------  155 (255)
T ss_dssp             SCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTT------------
T ss_pred             CCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCCC------------
Confidence            79999999997654321   23456788999999999988875    346789999999776544322            


Q ss_pred             CchhhhccccchHHHHHHHHHHHHHHHHHhC---CccEEEEccCeeecCCCCCCCCccHHHHHHHHcCC-----------
Q 025755          150 SDEEFCKATENYYCLAKTIAEIQALEYAKRG---ELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKGF-----------  215 (248)
Q Consensus       150 ~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~---~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~~~-----------  215 (248)
                               ...|+.||++.+.+++.++.+.   ++++++++||.++|++....  ..+.+......+.           
T Consensus       156 ---------~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~~dv  224 (255)
T 1fmc_A          156 ---------MTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSV--ITPEIEQKMLQHTPIRRLGQPQDI  224 (255)
T ss_dssp             ---------CHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTT--CCHHHHHHHHHTCSSCSCBCHHHH
T ss_pred             ---------CcccHHHHHHHHHHHHHHHHHhhhcCcEEEEEecccCcchhhhhc--cChHHHHHHHhcCCcccCCCHHHH
Confidence                     2349999998888877776543   69999999999999864321  1122222222221           


Q ss_pred             -----CCCCCCCchhhhhhhhhcccee
Q 025755          216 -----FFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       216 -----~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                           ++..+...+++|+++.+|||..
T Consensus       225 a~~~~~l~~~~~~~~~G~~~~v~gg~~  251 (255)
T 1fmc_A          225 ANAALFLCSPAASWVSGQILTVSGGGV  251 (255)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTTSC
T ss_pred             HHHHHHHhCCccccCCCcEEEECCcee
Confidence                 3444455778999999999864

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=99.97  E-value=6.9e-32  Score=229.75  Aligned_cols=223  Identities=17%  Similarity=0.182  Sum_probs=160.8

Q ss_pred             EEEEEcCccHHHHHHHHHHHHC-CCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC--CCCEEEEc
Q 025755            8 RVCVTGAGGYIASWLVKYLLLK-GYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA--GCTGVFHV   84 (248)
Q Consensus         8 ~vlVtG~~g~iG~~~~~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~--~id~vi~~   84 (248)
                      +||||||+||||+++++.|+++ |++|++++|+........+..+. ...++.++.+|++|.+++.++++  ++|+||||
T Consensus         2 kvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~   80 (361)
T 1kew_A            2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDIS-ESNRYNFEHADICDSAEITRIFEQYQPDAVMHL   80 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTT-TCTTEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             EEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhhhhhh-cCCCeEEEECCCCCHHHHHHHHhhcCCCEEEEC
Confidence            6999999999999999999998 79999999875211111222221 13578999999999999999998  89999999


Q ss_pred             cccCCCCCCCCccccchhhhHHHHHHHHHHHHhc--CCC-------EEEEEeccceeccCCCC-------CCCCccCCCC
Q 025755           85 ACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKA--KVK-------RVVVVSSIGAVMLNPNW-------PKGQVMDEEC  148 (248)
Q Consensus        85 ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~--~~~-------~iV~vSS~~~~~~~~~~-------~~~~~~~e~~  148 (248)
                      ||..........+..++++|+.++.++++++.+.  +++       +|||+||.. +++....       ....+++|+.
T Consensus        81 A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~-v~g~~~~~~~~~~~~~~~~~~E~~  159 (361)
T 1kew_A           81 AAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDE-VYGDLPHPDEVENSVTLPLFTETT  159 (361)
T ss_dssp             CSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGG-GGCCCCCGGGSCTTSCCCCBCTTS
T ss_pred             CCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHH-HhCCCcccccccccccCCCCCCCC
Confidence            9976422112345678999999999999999988  766       999999965 4443210       0001566665


Q ss_pred             CCchhhhccccchHHHHHHHHHHHHHHHHHhCCccEEEEccCeeecCCCCCCCCccHHHHHHHHcCCCCCCCCCchhhhh
Q 025755          149 WSDEEFCKATENYYCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKGFFFTTPSHSYMLER  228 (248)
Q Consensus       149 ~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~  228 (248)
                      +..      +.+.|+.||..+|.+++.++.+++++++++||+.+|||..... .....++..+..+..+....++....+
T Consensus       160 ~~~------~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~vrp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (361)
T 1kew_A          160 AYA------PSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPE-KLIPLVILNALEGKPLPIYGKGDQIRD  232 (361)
T ss_dssp             CCC------CCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTT-SHHHHHHHHHHHTCCEEEETTSCCEEE
T ss_pred             CCC------CCCccHHHHHHHHHHHHHHHHHhCCcEEEEeeceeECCCCCcc-cHHHHHHHHHHcCCCceEcCCCceeEe
Confidence            543      3566999999999999999887789999999999999986532 244556666666654333233323334


Q ss_pred             hhhhccceeEE
Q 025755          229 TLVLNQGVRLY  239 (248)
Q Consensus       229 ~l~vd~g~~~~  239 (248)
                      .+++++...++
T Consensus       233 ~i~v~Dva~a~  243 (361)
T 1kew_A          233 WLYVEDHARAL  243 (361)
T ss_dssp             EEEHHHHHHHH
T ss_pred             eEEHHHHHHHH
Confidence            55666554444

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.97  E-value=4.4e-32  Score=225.52  Aligned_cols=215  Identities=16%  Similarity=0.095  Sum_probs=152.7

Q ss_pred             CCCCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCC---CeEEEEccCCCHHHHHHHhC-
Q 025755            1 MSGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASE---NLQLFKTDLLDYEALCAATA-   76 (248)
Q Consensus         1 m~~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~---~~~~~~~Di~d~~~~~~~~~-   76 (248)
                      |+++++|+++||||+||||+++++.|+++|++|++++|+.... ....+.+.....   ++.++.+|++|.++++++++ 
T Consensus        21 m~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~-~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~   99 (297)
T 1xhl_A           21 MARFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRL-EETKQQILKAGVPAEKINAVVADVTEASGQDDIINT   99 (297)
T ss_dssp             --CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHH
Confidence            4557899999999999999999999999999999999986422 222223322223   78999999999999888876 


Q ss_pred             ------CCCEEEEccccCCCCC------CCCccccchhhhHHHHHHHHHHHHhc----CCCEEEEEeccceeccC-CCCC
Q 025755           77 ------GCTGVFHVACPVPVGK------VPNPEVQLIDPAVVGTKNVLNSCVKA----KVKRVVVVSSIGAVMLN-PNWP  139 (248)
Q Consensus        77 ------~id~vi~~ag~~~~~~------~~~~~~~~~~~n~~g~~~~~~~~~~~----~~~~iV~vSS~~~~~~~-~~~~  139 (248)
                            ++|+||||||......      ..+.|...+++|+.++.++++++.+.    + ++||++||..+..+. +.  
T Consensus       100 ~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-g~IV~isS~~~~~~~~~~--  176 (297)
T 1xhl_A          100 TLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-GEIVNVSSIVAGPQAHSG--  176 (297)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGSSSCCTT--
T ss_pred             HHHhcCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CEEEEEcCchhccCCCCC--
Confidence                  6899999999764322      12345678999999999888887653    4 899999997765443 22  


Q ss_pred             CCCccCCCCCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCC-Cc-----cHHHHHH
Q 025755          140 KGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTI-NT-----SSLLLLG  210 (248)
Q Consensus       140 ~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~-~~-----~~~~~~~  210 (248)
                                         ...|+.||++.+.+.+.++.+   .|++||+|+||++++|+..... ..     .......
T Consensus       177 -------------------~~~Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~  237 (297)
T 1xhl_A          177 -------------------YPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGS  237 (297)
T ss_dssp             -------------------SHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHH
T ss_pred             -------------------cchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCccccccccccccccchHHHHHH
Confidence                               234999998666665555432   3699999999999998643210 00     0011111


Q ss_pred             HHc----CC------------CCCCCC-CchhhhhhhhhccceeE
Q 025755          211 FLK----GF------------FFTTPS-HSYMLERTLVLNQGVRL  238 (248)
Q Consensus       211 ~~~----~~------------~l~~~~-~~~~~g~~l~vd~g~~~  238 (248)
                      ...    ++            ++.++. ..|++|+++.+|||+.+
T Consensus       238 ~~~~~p~~r~~~pedvA~~v~~l~s~~~~~~itG~~i~vdGG~~~  282 (297)
T 1xhl_A          238 RKECIPVGHCGKPEEIANIIVFLADRNLSSYIIGQSIVADGGSTL  282 (297)
T ss_dssp             CTTTCTTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGG
T ss_pred             HHhcCCCCCCcCHHHHHHHHHHHhCCcccCCccCcEEEECCCccc
Confidence            111    11            555555 67999999999999764

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=99.97  E-value=3.6e-32  Score=222.26  Aligned_cols=210  Identities=18%  Similarity=0.133  Sum_probs=151.5

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC------
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA------   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~------   76 (248)
                      ++++|+++||||+||||++++++|+++|++|++++|+... .....+.+   ..++.++.+|++|.++++++++      
T Consensus         9 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~---~~~~~~~~~D~~d~~~v~~~~~~~~~~~   84 (263)
T 3ak4_A            9 DLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMA-AQAVVAGL---ENGGFAVEVDVTKRASVDAAMQKAIDAL   84 (263)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHH-HHHHHHTC---TTCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHHH---hcCCeEEEEeCCCHHHHHHHHHHHHHHc
Confidence            3678999999999999999999999999999999998632 22222222   2267889999999999988886      


Q ss_pred             -CCCEEEEccccCCCCC----CCCccccchhhhHHHHHHHHHHHHhc----C-CCEEEEEeccceeccCCCCCCCCccCC
Q 025755           77 -GCTGVFHVACPVPVGK----VPNPEVQLIDPAVVGTKNVLNSCVKA----K-VKRVVVVSSIGAVMLNPNWPKGQVMDE  146 (248)
Q Consensus        77 -~id~vi~~ag~~~~~~----~~~~~~~~~~~n~~g~~~~~~~~~~~----~-~~~iV~vSS~~~~~~~~~~~~~~~~~e  146 (248)
                       ++|+||||||......    ..+.|...+++|+.++.++++++.+.    + .++||++||..+..+.+.         
T Consensus        85 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---------  155 (263)
T 3ak4_A           85 GGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGAPL---------  155 (263)
T ss_dssp             TCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTT---------
T ss_pred             CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccCCCC---------
Confidence             7999999999765331    12345678999999999988887653    4 689999999876554432         


Q ss_pred             CCCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCC-----C---ccHHHHHHHHc--
Q 025755          147 ECWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTI-----N---TSSLLLLGFLK--  213 (248)
Q Consensus       147 ~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~-----~---~~~~~~~~~~~--  213 (248)
                                  ...|+.||+..+.+.+.++.+   .|+++++|+||.+++|+.....     .   ........+..  
T Consensus       156 ------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (263)
T 3ak4_A          156 ------------LAHYSASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLT  223 (263)
T ss_dssp             ------------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBTTHHHHHHHHHHHHHHTSCHHHHHHHHHHTC
T ss_pred             ------------chhHHHHHHHHHHHHHHHHHHHhHcCeEEEEEecccccChhhhhhccccccccccCcHHHHHHHHhcC
Confidence                        234999998666665555543   2699999999999998642110     0   00111111111  


Q ss_pred             --CC------------CCCCCCCchhhhhhhhhcccee
Q 025755          214 --GF------------FFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       214 --~~------------~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                        ++            ++.++...|++|+++.+|||+.
T Consensus       224 p~~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG~~  261 (263)
T 3ak4_A          224 PLGRIEEPEDVADVVVFLASDAARFMTGQGINVTGGVR  261 (263)
T ss_dssp             TTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSSS
T ss_pred             CCCCCcCHHHHHHHHHHHhCccccCCCCCEEEECcCEe
Confidence              11            5556667799999999999964

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=99.97  E-value=2.9e-32  Score=225.99  Aligned_cols=211  Identities=15%  Similarity=0.140  Sum_probs=151.8

Q ss_pred             CCCCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEE-cCCCchhhHHhhhhc-CCCCCeEEEEccCCCHH---------
Q 025755            1 MSGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTV-RDPCDEKNAHLKKLE-GASENLQLFKTDLLDYE---------   69 (248)
Q Consensus         1 m~~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~-r~~~~~~~~~~~~~~-~~~~~~~~~~~Di~d~~---------   69 (248)
                      |+++++|+++||||+||||+++++.|+++|++|++++ |+... .....+.+. ....++.++.+|++|.+         
T Consensus         4 m~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~-~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   82 (291)
T 1e7w_A            4 MTAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAE-ANALSATLNARRPNSAITVQADLSNVATAPVSGADG   82 (291)
T ss_dssp             ----CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHH-HHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHH-HHHHHHHHhhhcCCeeEEEEeecCCccccccccccc
Confidence            5668899999999999999999999999999999999 87532 222223332 22457899999999998         


Q ss_pred             --------HHHHHhC-------CCCEEEEccccCCCCCC------------------CCccccchhhhHHHHHHHHHHHH
Q 025755           70 --------ALCAATA-------GCTGVFHVACPVPVGKV------------------PNPEVQLIDPAVVGTKNVLNSCV  116 (248)
Q Consensus        70 --------~~~~~~~-------~id~vi~~ag~~~~~~~------------------~~~~~~~~~~n~~g~~~~~~~~~  116 (248)
                              +++++++       ++|+||||||.......                  .+.+...+++|+.++.++++++.
T Consensus        83 ~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~  162 (291)
T 1e7w_A           83 SAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFA  162 (291)
T ss_dssp             CCCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred             ccccchHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHHH
Confidence                    8888775       68999999997653321                  22345788999999998888876


Q ss_pred             h----cC------CCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCcc
Q 025755          117 K----AK------VKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELD  183 (248)
Q Consensus       117 ~----~~------~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~  183 (248)
                      +    .+      .++||++||..+..+.+..                     ..|+.||++.+.+.+.++.+   .+|+
T Consensus       163 ~~m~~~~~~~~~~~g~Iv~isS~~~~~~~~~~---------------------~~Y~asKaa~~~l~~~la~e~~~~gI~  221 (291)
T 1e7w_A          163 HRVAGTPAKHRGTNYSIINMVDAMTNQPLLGY---------------------TIYTMAKGALEGLTRSAALELAPLQIR  221 (291)
T ss_dssp             HHHHTSCGGGSCSCEEEEEECCTTTTSCCTTC---------------------HHHHHHHHHHHHHHHHHHHHHGGGTEE
T ss_pred             HHHHhcCCCCCCCCcEEEEEechhhcCCCCCC---------------------chhHHHHHHHHHHHHHHHHHHHhcCeE
Confidence            4    34      5899999998766554432                     33999997555555444432   2599


Q ss_pred             EEEEccCeeecCCCCCCCCccHHHHHHHH----cC-C------------CCCCCCCchhhhhhhhhccceeE
Q 025755          184 IVTVCPSIVIGPMLQPTINTSSLLLLGFL----KG-F------------FFTTPSHSYMLERTLVLNQGVRL  238 (248)
Q Consensus       184 v~~vrpg~i~g~~~~~~~~~~~~~~~~~~----~~-~------------~l~~~~~~~~~g~~l~vd~g~~~  238 (248)
                      ||+|+||.+.+++ . . .  +.....+.    .+ +            ++.++...|++|+++.||||+.+
T Consensus       222 vn~v~PG~v~T~~-~-~-~--~~~~~~~~~~~p~~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~~  288 (291)
T 1e7w_A          222 VNGVGPGLSVLVD-D-M-P--PAVWEGHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSL  288 (291)
T ss_dssp             EEEEEESSBCCGG-G-S-C--HHHHHHHHTTCTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             EEEEeeCCccCCc-c-C-C--HHHHHHHHhhCCCCCCCCCHHHHHHHHHHHhCCcccCccCcEEEECCCccc
Confidence            9999999999987 3 1 1  11111111    11 1            56677788999999999999763

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=99.97  E-value=2.6e-31  Score=224.30  Aligned_cols=192  Identities=43%  Similarity=0.694  Sum_probs=141.4

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhh-HHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEEc
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKN-AHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFHV   84 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~~   84 (248)
                      +|+||||||+||||++++++|+++|++|+++.|+...... ..+..+. ...++.++++|++|.+++.++++++|+|||+
T Consensus         9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~   87 (338)
T 2rh8_A            9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQ-ELGDLKIFRADLTDELSFEAPIAGCDFVFHV   87 (338)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHG-GGSCEEEEECCTTTSSSSHHHHTTCSEEEEE
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcC-CCCcEEEEecCCCChHHHHHHHcCCCEEEEe
Confidence            5899999999999999999999999999999987643211 1111222 1346889999999999999999999999999


Q ss_pred             cccCCCCCCCCccccchhhhHHHHHHHHHHHHhcC-CCEEEEEeccceeccCCCCCCCCccCCCCCCchhh--hccc-cc
Q 025755           85 ACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAK-VKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEF--CKAT-EN  160 (248)
Q Consensus        85 ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~-~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~--~~~~-~~  160 (248)
                      |+..... ..++..+++++|+.|+.++++++.+.+ +++|||+||.+++++.+......+++|+++...+.  +..+ ..
T Consensus        88 A~~~~~~-~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~  166 (338)
T 2rh8_A           88 ATPVHFA-SEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTSSAAAVTINQLDGTGLVVDEKNWTDIEFLTSAKPPTW  166 (338)
T ss_dssp             SSCCCC----------CHHHHHHHHHHHHHHHHCTTCCEEEEECCHHHHHHHHHTCSCCCCCTTTTTCC-------CCCC
T ss_pred             CCccCCC-CCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEEecHHHeecCCcCCCCcccChhhccchhhccccCCccc
Confidence            9865321 122224589999999999999999985 89999999977665432211123677776543222  1111 22


Q ss_pred             hHHHHHHHHHHHHHHHHHhCCccEEEEccCeeecCCCCC
Q 025755          161 YYCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQP  199 (248)
Q Consensus       161 ~Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~  199 (248)
                      .|+.||.++|.++.+++.+++++++++||+++|||....
T Consensus       167 ~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~  205 (338)
T 2rh8_A          167 GYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGSSLTS  205 (338)
T ss_dssp             CCTTSCCHHHHHHHHHHHHHTCCEEEEEECEEESCCSSS
T ss_pred             hHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCC
Confidence            599999999999999987667999999999999998654

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=99.97  E-value=2.7e-32  Score=222.15  Aligned_cols=210  Identities=21%  Similarity=0.254  Sum_probs=150.7

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-------CC
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-------GC   78 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-------~i   78 (248)
                      +|+++||||+||||+++++.|+++|++|++++|+... .....+.+.....++.++.+|++|.++++++++       ++
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   80 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDAT-AKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGF   80 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHH-HHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            5899999999999999999999999999999998632 222223333334578899999999999988876       79


Q ss_pred             CEEEEccccCCCCC----CCCccccchhhhHHHHHHHHHHHHhc----C-CCEEEEEeccceeccCCCCCCCCccCCCCC
Q 025755           79 TGVFHVACPVPVGK----VPNPEVQLIDPAVVGTKNVLNSCVKA----K-VKRVVVVSSIGAVMLNPNWPKGQVMDEECW  149 (248)
Q Consensus        79 d~vi~~ag~~~~~~----~~~~~~~~~~~n~~g~~~~~~~~~~~----~-~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~  149 (248)
                      |+||||||......    ..+.|+..+++|+.++.++++++.+.    + .++||++||..+..+.+.            
T Consensus        81 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~------------  148 (256)
T 1geg_A           81 DVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPE------------  148 (256)
T ss_dssp             CEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTT------------
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCCC------------
Confidence            99999999764321    12345678999999998888777553    4 689999999877665433            


Q ss_pred             CchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCC----C----ccHHHHHHHHc----C
Q 025755          150 SDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTI----N----TSSLLLLGFLK----G  214 (248)
Q Consensus       150 ~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~----~----~~~~~~~~~~~----~  214 (248)
                               ...|+.||+..+.+.+.++.+   .+++||+|+||++.+|+.....    .    ........+..    +
T Consensus       149 ---------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~  219 (256)
T 1geg_A          149 ---------LAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLG  219 (256)
T ss_dssp             ---------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTTC
T ss_pred             ---------chhHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCCccchhhhhhhhccccccCChHHHHHHHHhcCCCC
Confidence                     234999998555555554432   3599999999999998632100    0    00011111111    1


Q ss_pred             C------------CCCCCCCchhhhhhhhhcccee
Q 025755          215 F------------FFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       215 ~------------~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                      +            ++.++...|++|+++.+|||+.
T Consensus       220 r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~  254 (256)
T 1geg_A          220 RLSEPEDVAACVSYLASPDSDYMTGQSLLIDGGMV  254 (256)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSSS
T ss_pred             CCcCHHHHHHHHHHHhCccccCCCCCEEEeCCCcc
Confidence            1            5666667899999999999975

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.97  E-value=3.2e-31  Score=211.68  Aligned_cols=206  Identities=19%  Similarity=0.259  Sum_probs=156.0

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEEc
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFHV   84 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~~   84 (248)
                      +||+|+||||+|+||++++++|+++|++|++++|+..+..        ....++.++.+|++|.+++.++++++|+|||+
T Consensus         3 ~m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--------~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~   74 (227)
T 3dhn_A            3 KVKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIK--------IENEHLKVKKADVSSLDEVCEVCKGADAVISA   74 (227)
T ss_dssp             CCCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCC--------CCCTTEEEECCCTTCHHHHHHHHTTCSEEEEC
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccch--------hccCceEEEEecCCCHHHHHHHhcCCCEEEEe
Confidence            3589999999999999999999999999999999864211        11267999999999999999999999999999


Q ss_pred             cccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccccchHHH
Q 025755           85 ACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCL  164 (248)
Q Consensus        85 ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~  164 (248)
                      ||....      ...++++|+.++.++++++++.+.++|||+||..++++.+.     ...++.+.      .|.+.|+.
T Consensus        75 a~~~~~------~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~-----~~~~~~~~------~p~~~Y~~  137 (227)
T 3dhn_A           75 FNPGWN------NPDIYDETIKVYLTIIDGVKKAGVNRFLMVGGAGSLFIAPG-----LRLMDSGE------VPENILPG  137 (227)
T ss_dssp             CCC------------CCSHHHHHHHHHHHHHHHTTCSEEEEECCSTTSEEETT-----EEGGGTTC------SCGGGHHH
T ss_pred             CcCCCC------ChhHHHHHHHHHHHHHHHHHHhCCCEEEEeCChhhccCCCC-----CccccCCc------chHHHHHH
Confidence            986522      13488999999999999999999999999999876665432     11223232      33556999


Q ss_pred             HHHHHHHHHHHHHHhCCccEEEEccCeeecCCCCCCCCccHHHHHHHHcCCCCCCCCCchhhhhhhhhccceeEEEeecc
Q 025755          165 AKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKGFFFTTPSHSYMLERTLVLNQGVRLYRCKIQ  244 (248)
Q Consensus       165 sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~l~vd~g~~~~~~~~~  244 (248)
                      +|...|.+.+.++.+.+++++++||+++|||........        ..+........+   .+.+++++...++..++.
T Consensus       138 sK~~~e~~~~~~~~~~~~~~~ilrp~~v~g~~~~~~~~~--------~~~~~~~~~~~~---~~~i~~~Dva~ai~~~l~  206 (227)
T 3dhn_A          138 VKALGEFYLNFLMKEKEIDWVFFSPAADMRPGVRTGRYR--------LGKDDMIVDIVG---NSHISVEDYAAAMIDELE  206 (227)
T ss_dssp             HHHHHHHHHHTGGGCCSSEEEEEECCSEEESCCCCCCCE--------EESSBCCCCTTS---CCEEEHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhhccCccEEEEeCCcccCCCcccccee--------ecCCCcccCCCC---CcEEeHHHHHHHHHHHHh
Confidence            999999999999877789999999999999976543111        111122222222   456888888777776666


Q ss_pred             CC
Q 025755          245 IP  246 (248)
Q Consensus       245 ~p  246 (248)
                      .|
T Consensus       207 ~~  208 (227)
T 3dhn_A          207 HP  208 (227)
T ss_dssp             SC
T ss_pred             Cc
Confidence            55

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=99.97  E-value=4.9e-31  Score=222.83  Aligned_cols=215  Identities=20%  Similarity=0.187  Sum_probs=153.3

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEEcc
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFHVA   85 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~~a   85 (248)
                      +|+|+||||+|+||++++++|+++|++|++++|+......  +.     ..++.++.+|++|.+++.++++++|+|||+|
T Consensus        13 ~M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--l~-----~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~a   85 (342)
T 2x4g_A           13 HVKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQR--LA-----YLEPECRVAEMLDHAGLERALRGLDGVIFSA   85 (342)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGG--GG-----GGCCEEEECCTTCHHHHHHHTTTCSEEEEC-
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhh--hc-----cCCeEEEEecCCCHHHHHHHHcCCCEEEECC
Confidence            4589999999999999999999999999999998653211  11     1368899999999999999999999999999


Q ss_pred             ccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccccchHHHH
Q 025755           86 CPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLA  165 (248)
Q Consensus        86 g~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~s  165 (248)
                      |....  ....+..++++|+.++.++++++.+.+.++|||+||..++.....  ...+ +|+++..+...  ..+.|+.+
T Consensus        86 ~~~~~--~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~--~~~~-~E~~~~~p~~~--~~~~Y~~s  158 (342)
T 2x4g_A           86 GYYPS--RPRRWQEEVASALGQTNPFYAACLQARVPRILYVGSAYAMPRHPQ--GLPG-HEGLFYDSLPS--GKSSYVLC  158 (342)
T ss_dssp             -------------CHHHHHHHHHHHHHHHHHHHTCSCEEEECCGGGSCCCTT--SSCB-CTTCCCSSCCT--TSCHHHHH
T ss_pred             ccCcC--CCCCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHhhCcCCC--CCCC-CCCCCCCcccc--ccChHHHH
Confidence            97542  234557889999999999999999999899999999765433221  0133 67766544110  14569999


Q ss_pred             HHHHHHHHHHHHHhCCccEEEEccCeeecCCC-CCCCCccHHHHHHHHcCCCCCCCCCchhhhhhhhhccceeEEEe
Q 025755          166 KTIAEIQALEYAKRGELDIVTVCPSIVIGPML-QPTINTSSLLLLGFLKGFFFTTPSHSYMLERTLVLNQGVRLYRC  241 (248)
Q Consensus       166 K~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~l~vd~g~~~~~~  241 (248)
                      |..+|.+++.++.+ +++++++||+.+|||.. .+  . ...++..+..+.....   +....+.+++++...++..
T Consensus       159 K~~~e~~~~~~~~~-g~~~~ilrp~~v~g~~~~~~--~-~~~~~~~~~~~~~~~~---~~~~~~~i~v~Dva~~~~~  228 (342)
T 2x4g_A          159 KWALDEQAREQARN-GLPVVIGIPGMVLGELDIGP--T-TGRVITAIGNGEMTHY---VAGQRNVIDAAEAGRGLLM  228 (342)
T ss_dssp             HHHHHHHHHHHHHT-TCCEEEEEECEEECSCCSSC--S-TTHHHHHHHTTCCCEE---ECCEEEEEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhhc-CCcEEEEeCCceECCCCccc--c-HHHHHHHHHcCCCccc---cCCCcceeeHHHHHHHHHH
Confidence            99999999999877 79999999999999986 32  2 4456666666654322   1112234566655544433

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=99.97  E-value=5.5e-32  Score=220.73  Aligned_cols=214  Identities=15%  Similarity=0.115  Sum_probs=152.7

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC------
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA------   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~------   76 (248)
                      ++++|+++||||+||||++++++|+++|++|++++|+..+......+.+.....++.++.+|++|.++++++++      
T Consensus         4 ~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (261)
T 1gee_A            4 DLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEF   83 (261)
T ss_dssp             GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            47889999999999999999999999999999999933222222233333334578899999999999888876      


Q ss_pred             -CCCEEEEccccCCCCC----CCCccccchhhhHHHHHHHHHHHHhc----C-CCEEEEEeccceeccCCCCCCCCccCC
Q 025755           77 -GCTGVFHVACPVPVGK----VPNPEVQLIDPAVVGTKNVLNSCVKA----K-VKRVVVVSSIGAVMLNPNWPKGQVMDE  146 (248)
Q Consensus        77 -~id~vi~~ag~~~~~~----~~~~~~~~~~~n~~g~~~~~~~~~~~----~-~~~iV~vSS~~~~~~~~~~~~~~~~~e  146 (248)
                       ++|+||||||......    ..+.+...+++|+.++.++++++.+.    + .++||++||..+..+.+.         
T Consensus        84 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~---------  154 (261)
T 1gee_A           84 GKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPL---------  154 (261)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTT---------
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcCCCCC---------
Confidence             7899999999765431    12345678999999998888776543    4 679999999776544332         


Q ss_pred             CCCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCCCccHHHHHHHHc----CC----
Q 025755          147 ECWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLK----GF----  215 (248)
Q Consensus       147 ~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~----~~----  215 (248)
                                  ...|+.||++.+.+++.++.+   .++++++++||+++||+..... ..+.....+..    ++    
T Consensus       155 ------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  221 (261)
T 1gee_A          155 ------------FVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKF-ADPEQRADVESMIPMGYIGEP  221 (261)
T ss_dssp             ------------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHH-HSHHHHHHHHTTCTTSSCBCH
T ss_pred             ------------ccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCchhhhcc-cChhHHHHHHhcCCCCCCcCH
Confidence                        234999997666655555443   2699999999999998753210 00111111111    11    


Q ss_pred             --------CCCCCCCchhhhhhhhhccceeE
Q 025755          216 --------FFTTPSHSYMLERTLVLNQGVRL  238 (248)
Q Consensus       216 --------~l~~~~~~~~~g~~l~vd~g~~~  238 (248)
                              ++..+...+++|+++.+|||..+
T Consensus       222 ~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~  252 (261)
T 1gee_A          222 EEIAAVAAWLASSEASYVTGITLFADGGMTL  252 (261)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHHHHHHhCccccCCCCcEEEEcCCccc
Confidence                    45555567899999999999764

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=99.97  E-value=2e-31  Score=216.83  Aligned_cols=209  Identities=14%  Similarity=0.049  Sum_probs=151.4

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC------
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA------   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~------   76 (248)
                      +|++|+++||||+||||++++++|+++|++|++++|+.+. .....+.+   ..++.++.+|++|.++++++++      
T Consensus         2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~   77 (254)
T 1hdc_A            2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEE-GAATAREL---GDAARYQHLDVTIEEDWQRVVAYAREEF   77 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHH-HHHHHHTT---GGGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHHh---CCceeEEEecCCCHHHHHHHHHHHHHHc
Confidence            4788999999999999999999999999999999998632 22222222   3468899999999999988876      


Q ss_pred             -CCCEEEEccccCCCCC----CCCccccchhhhHHHHHHHH----HHHHhcCCCEEEEEeccceeccCCCCCCCCccCCC
Q 025755           77 -GCTGVFHVACPVPVGK----VPNPEVQLIDPAVVGTKNVL----NSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEE  147 (248)
Q Consensus        77 -~id~vi~~ag~~~~~~----~~~~~~~~~~~n~~g~~~~~----~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~  147 (248)
                       ++|+||||||......    ..+.+...+++|+.++.+++    +.+++.+.++||++||..++.+.+.          
T Consensus        78 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~----------  147 (254)
T 1hdc_A           78 GSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLAL----------  147 (254)
T ss_dssp             SCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT----------
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCCC----------
Confidence             7999999999765321    12345678999999987554    4455556789999999877655432          


Q ss_pred             CCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCC--------------CCC-c-cHHHH
Q 025755          148 CWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQP--------------TIN-T-SSLLL  208 (248)
Q Consensus       148 ~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~--------------~~~-~-~~~~~  208 (248)
                                 ...|+.||+..+.+.+.++.+   .++++++|+||+++||+...              ... . .+.-+
T Consensus       148 -----------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~p~~~~~~~~~dv  216 (254)
T 1hdc_A          148 -----------TSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIRQGEGNYPNTPMGRVGNEPGEI  216 (254)
T ss_dssp             -----------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHTCCCSTTSCTTSTTSSCB-CHHHH
T ss_pred             -----------chhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccCcCccccccchhHHHHHHhcCCCCCCCCCHHHH
Confidence                       234999998666665555443   26999999999999975210              000 1 22222


Q ss_pred             HHHHcCCCCCCCCCchhhhhhhhhccceeE
Q 025755          209 LGFLKGFFFTTPSHSYMLERTLVLNQGVRL  238 (248)
Q Consensus       209 ~~~~~~~~l~~~~~~~~~g~~l~vd~g~~~  238 (248)
                      .....  ++.++...|++|+.+.+|||...
T Consensus       217 A~~v~--~l~s~~~~~~tG~~~~vdgG~~~  244 (254)
T 1hdc_A          217 AGAVV--KLLSDTSSYVTGAELAVDGGWTT  244 (254)
T ss_dssp             HHHHH--HHHSGGGTTCCSCEEEESTTTTT
T ss_pred             HHHHH--HHhCchhcCCCCCEEEECCCccc
Confidence            22221  55566678999999999999753

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=99.97  E-value=2.6e-31  Score=220.01  Aligned_cols=209  Identities=16%  Similarity=0.168  Sum_probs=150.2

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhc-CCCCCeEEEEccCCC----HHHHHHHhC-
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLE-GASENLQLFKTDLLD----YEALCAATA-   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~Di~d----~~~~~~~~~-   76 (248)
                      ++++|+++||||+||||+++++.|+++|++|++++|+..+......+.+. ....++.++.+|++|    .++++++++ 
T Consensus        20 ~l~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~   99 (288)
T 2x9g_A           20 HMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIINS   99 (288)
T ss_dssp             --CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHHH
Confidence            47889999999999999999999999999999999986222222223332 234578999999999    888888775 


Q ss_pred             ------CCCEEEEccccCCCCCC--------------CCccccchhhhHHHHHHHHHHHHhc----C------CCEEEEE
Q 025755           77 ------GCTGVFHVACPVPVGKV--------------PNPEVQLIDPAVVGTKNVLNSCVKA----K------VKRVVVV  126 (248)
Q Consensus        77 ------~id~vi~~ag~~~~~~~--------------~~~~~~~~~~n~~g~~~~~~~~~~~----~------~~~iV~v  126 (248)
                            ++|+||||||.......              .+.+...+++|+.++.++++++.+.    +      .++||++
T Consensus       100 ~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iv~i  179 (288)
T 2x9g_A          100 CFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNL  179 (288)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCCEEEEEE
T ss_pred             HHHhcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCeEEEEE
Confidence                  68999999997653322              1234568899999999998888654    2      5799999


Q ss_pred             eccceeccCCCCCCCCccCCCCCCchhhhccccchHHHHHHHH----HHHHHHHHHhCCccEEEEccCeeecCCCCCCCC
Q 025755          127 SSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAKTIA----EIQALEYAKRGELDIVTVCPSIVIGPMLQPTIN  202 (248)
Q Consensus       127 SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~----e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~  202 (248)
                      ||..++.+.+..                     ..|+.||++.    +.++.+++++ ||+||+|+||.++||+ ...  
T Consensus       180 sS~~~~~~~~~~---------------------~~Y~asKaa~~~l~~~la~e~~~~-gI~vn~v~PG~v~t~~-~~~--  234 (288)
T 2x9g_A          180 CDAMVDQPCMAF---------------------SLYNMGKHALVGLTQSAALELAPY-GIRVNGVAPGVSLLPV-AMG--  234 (288)
T ss_dssp             CCTTTTSCCTTC---------------------HHHHHHHHHHHHHHHHHHHHHGGG-TEEEEEEEESSCSCCT-TSC--
T ss_pred             ecccccCCCCCC---------------------chHHHHHHHHHHHHHHHHHHhhcc-CeEEEEEEeccccCcc-ccC--
Confidence            998766554332                     3499999744    4455555444 5999999999999998 311  


Q ss_pred             ccHHHHHHHHc----CC-------------CCCCCCCchhhhhhhhhccceeE
Q 025755          203 TSSLLLLGFLK----GF-------------FFTTPSHSYMLERTLVLNQGVRL  238 (248)
Q Consensus       203 ~~~~~~~~~~~----~~-------------~l~~~~~~~~~g~~l~vd~g~~~  238 (248)
                        ......+..    ++             ++.++...|++|+++.||||+.+
T Consensus       235 --~~~~~~~~~~~p~~r~~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~~  285 (288)
T 2x9g_A          235 --EEEKDKWRRKVPLGRREASAEQIADAVIFLVSGSAQYITGSIIKVDGGLSL  285 (288)
T ss_dssp             --HHHHHHHHHTCTTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             --hHHHHHHHhhCCCCCCCCCHHHHHHHHHHHhCccccCccCCEEEECcchhh
Confidence              111111111    11             45566678999999999999753

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.97  E-value=3e-31  Score=214.68  Aligned_cols=203  Identities=15%  Similarity=0.109  Sum_probs=150.1

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC------
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA------   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~------   76 (248)
                      ++++|+++||||+||||+++++.|+++|++|++++|+.... ....+.+     .+.++.+|++|.++++++++      
T Consensus         2 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~-~~~~~~~-----~~~~~~~D~~~~~~~~~~~~~~~~~~   75 (245)
T 1uls_A            2 RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPL-REAAEAV-----GAHPVVMDVADPASVERGFAEALAHL   75 (245)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHTT-----TCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHHc-----CCEEEEecCCCHHHHHHHHHHHHHHc
Confidence            37899999999999999999999999999999999976321 1222211     27889999999999888775      


Q ss_pred             -CCCEEEEccccCCCCC----CCCccccchhhhHHHHHHHHHHHHhc----CCCEEEEEeccceeccCCCCCCCCccCCC
Q 025755           77 -GCTGVFHVACPVPVGK----VPNPEVQLIDPAVVGTKNVLNSCVKA----KVKRVVVVSSIGAVMLNPNWPKGQVMDEE  147 (248)
Q Consensus        77 -~id~vi~~ag~~~~~~----~~~~~~~~~~~n~~g~~~~~~~~~~~----~~~~iV~vSS~~~~~~~~~~~~~~~~~e~  147 (248)
                       ++|+||||||......    ..+.|...+++|+.++.++++++.+.    +.++||++||.. .++.+..         
T Consensus        76 g~id~lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~-~~~~~~~---------  145 (245)
T 1uls_A           76 GRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRV-YLGNLGQ---------  145 (245)
T ss_dssp             SSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGG-GGCCTTC---------
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccch-hcCCCCc---------
Confidence             4899999999765432    12345678999999999998887653    568999999977 6654432         


Q ss_pred             CCCchhhhccccchHHHHHHH----HHHHHHHHHHhCCccEEEEccCeeecCCCCCCCCccHHHHHHHH----cCC----
Q 025755          148 CWSDEEFCKATENYYCLAKTI----AEIQALEYAKRGELDIVTVCPSIVIGPMLQPTINTSSLLLLGFL----KGF----  215 (248)
Q Consensus       148 ~~~~~~~~~~~~~~Y~~sK~~----~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~----~~~----  215 (248)
                                  ..|+.||+.    ++.++.++.++ |++||+|+||.+.+++.....   ........    .++    
T Consensus       146 ------------~~Y~asK~a~~~~~~~la~e~~~~-gi~v~~v~PG~v~t~~~~~~~---~~~~~~~~~~~p~~~~~~~  209 (245)
T 1uls_A          146 ------------ANYAASMAGVVGLTRTLALELGRW-GIRVNTLAPGFIETRMTAKVP---EKVREKAIAATPLGRAGKP  209 (245)
T ss_dssp             ------------HHHHHHHHHHHHHHHHHHHHHGGG-TEEEEEEEECSBCCTTTSSSC---HHHHHHHHHTCTTCSCBCH
T ss_pred             ------------hhHHHHHHHHHHHHHHHHHHHhHh-CeEEEEEEeCcCcCcchhhcC---HHHHHHHHhhCCCCCCcCH
Confidence                        239999974    45555555544 599999999999999754321   11111111    111    


Q ss_pred             --------CCCCCCCchhhhhhhhhcccee
Q 025755          216 --------FFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       216 --------~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                              ++.++...|++|+.+.+|||+.
T Consensus       210 ~dvA~~v~~l~s~~~~~~tG~~~~vdgG~~  239 (245)
T 1uls_A          210 LEVAYAALFLLSDESSFITGQVLFVDGGRT  239 (245)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred             HHHHHHHHHHhCchhcCCcCCEEEECCCcc
Confidence                    5666667899999999999975

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=99.97  E-value=4.6e-32  Score=224.29  Aligned_cols=213  Identities=14%  Similarity=0.120  Sum_probs=157.9

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCC---eEEEEEcCCCchhhHHhhhhcC--CCCCeEEEEccCCCHHHHHHHhC--
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGY---MVHGTVRDPCDEKNAHLKKLEG--ASENLQLFKTDLLDYEALCAATA--   76 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~---~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~Di~d~~~~~~~~~--   76 (248)
                      +++|+++||||+||||++++++|+++|+   +|++.+|+.+.. ....+.+..  ...++.++.+|++|.++++++++  
T Consensus        31 l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~-~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~  109 (287)
T 3rku_A           31 LAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKL-EELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENL  109 (287)
T ss_dssp             HTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHH-HHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTS
T ss_pred             cCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHH-HHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHH
Confidence            6789999999999999999999999998   999999986432 222222222  24578899999999999999886  


Q ss_pred             -----CCCEEEEccccCCCC-C----CCCccccchhhhHHHHHHHHHHHH----hcCCCEEEEEeccceeccCCCCCCCC
Q 025755           77 -----GCTGVFHVACPVPVG-K----VPNPEVQLIDPAVVGTKNVLNSCV----KAKVKRVVVVSSIGAVMLNPNWPKGQ  142 (248)
Q Consensus        77 -----~id~vi~~ag~~~~~-~----~~~~~~~~~~~n~~g~~~~~~~~~----~~~~~~iV~vSS~~~~~~~~~~~~~~  142 (248)
                           ++|+||||||..... .    ..+.|+..+++|+.|+.++++++.    +.+.++||++||..+..+.+..    
T Consensus       110 ~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~----  185 (287)
T 3rku_A          110 PQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDAYPTG----  185 (287)
T ss_dssp             CGGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTC----
T ss_pred             HHhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECChhhcCCCCCC----
Confidence                 479999999976422 1    124467789999999999988884    3467899999998877665432    


Q ss_pred             ccCCCCCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCCCccHHHHHHHHcC-----
Q 025755          143 VMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKG-----  214 (248)
Q Consensus       143 ~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~~-----  214 (248)
                                       ..|+.||++.+.+.+.++.+   .||+||+|+||.+.+++..................     
T Consensus       186 -----------------~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~  248 (287)
T 3rku_A          186 -----------------SIYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEFSLVRYRGNEEQAKNVYKDTTPLM  248 (287)
T ss_dssp             -----------------HHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSHHHHHTTTCHHHHHHHHTTSCCEE
T ss_pred             -----------------chHHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCccccccccCcHHHHHHhhcccCCCC
Confidence                             33999998777777666655   36999999999999986321100111111111111     


Q ss_pred             --------CCCCCCCCchhhhhhhhhccceeE
Q 025755          215 --------FFFTTPSHSYMLERTLVLNQGVRL  238 (248)
Q Consensus       215 --------~~l~~~~~~~~~g~~l~vd~g~~~  238 (248)
                              .++.++...+++|+++.+|+|...
T Consensus       249 pedvA~~v~~l~s~~~~~i~g~~i~v~~g~~~  280 (287)
T 3rku_A          249 ADDVADLIVYATSRKQNTVIADTLIFPTNQAS  280 (287)
T ss_dssp             HHHHHHHHHHHHTSCTTEEEEEEEEEETTEEE
T ss_pred             HHHHHHHHHHHhCCCCCeEecceEEeeCCCCC
Confidence                    167788889999999999999764

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=99.97  E-value=1.3e-31  Score=225.35  Aligned_cols=175  Identities=21%  Similarity=0.216  Sum_probs=143.9

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC--CCCEEEE
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA--GCTGVFH   83 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~--~id~vi~   83 (248)
                      ||+|+||||+|+||++++++|+++|++|++++|+.....    +.+   ..++.++.+|++|.+++.++++  ++|+|||
T Consensus         1 M~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~----~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~d~vih   73 (330)
T 2c20_A            1 MNSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHE----DAI---TEGAKFYNGDLRDKAFLRDVFTQENIEAVMH   73 (330)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCG----GGS---CTTSEEEECCTTCHHHHHHHHHHSCEEEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCch----hhc---CCCcEEEECCCCCHHHHHHHHhhcCCCEEEE
Confidence            479999999999999999999999999999998764221    111   1368899999999999999998  8999999


Q ss_pred             ccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccccchHH
Q 025755           84 VACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYC  163 (248)
Q Consensus        84 ~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~  163 (248)
                      +||..........+..++++|+.++.++++++++.+.++|||+||.. +++...   ..+++|+++..+      .+.|+
T Consensus        74 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~-~~~~~~---~~~~~E~~~~~~------~~~Y~  143 (330)
T 2c20_A           74 FAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIFSSTAA-TYGEVD---VDLITEETMTNP------TNTYG  143 (330)
T ss_dssp             CCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGG-GGCSCS---SSSBCTTSCCCC------SSHHH
T ss_pred             CCcccCccccccCHHHHHHHHhHHHHHHHHHHHHcCCCEEEEeCCce-eeCCCC---CCCCCcCCCCCC------CChHH
Confidence            99975432112344678999999999999999999889999999965 455432   467788876543      45699


Q ss_pred             HHHHHHHHHHHHHHHhCCccEEEEccCeeecCCC
Q 025755          164 LAKTIAEIQALEYAKRGELDIVTVCPSIVIGPML  197 (248)
Q Consensus       164 ~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~  197 (248)
                      .+|..+|.++..++.+++++++++||+++|||..
T Consensus       144 ~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~G~~~  177 (330)
T 2c20_A          144 ETKLAIEKMLHWYSQASNLRYKIFRYFNVAGATP  177 (330)
T ss_dssp             HHHHHHHHHHHHHHHTSSCEEEEEECSEEECCCT
T ss_pred             HHHHHHHHHHHHHHHHhCCcEEEEecCcccCCCC
Confidence            9999999999999988789999999999999963

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=99.97  E-value=7e-31  Score=216.02  Aligned_cols=214  Identities=15%  Similarity=0.144  Sum_probs=156.2

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC------
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA------   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~------   76 (248)
                      .+++|+++||||+||||++++++|+++|++|++++|+... .....+.+. ...++.++.+|++|.++++++++      
T Consensus        13 ~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~-~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   90 (278)
T 2bgk_A           13 RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDH-GQKVCNNIG-SPDVISFVHCDVTKDEDVRNLVDTTIAKH   90 (278)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHH-HHHHHHHHC-CTTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhH-HHHHHHHhC-CCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            3678999999999999999999999999999999987532 222222232 22478999999999999988876      


Q ss_pred             -CCCEEEEccccCCCC--C----CCCccccchhhhHHHHHHHHHHHHhc----CCCEEEEEeccceeccCCCCCCCCccC
Q 025755           77 -GCTGVFHVACPVPVG--K----VPNPEVQLIDPAVVGTKNVLNSCVKA----KVKRVVVVSSIGAVMLNPNWPKGQVMD  145 (248)
Q Consensus        77 -~id~vi~~ag~~~~~--~----~~~~~~~~~~~n~~g~~~~~~~~~~~----~~~~iV~vSS~~~~~~~~~~~~~~~~~  145 (248)
                       ++|+||||||.....  .    ..+.+...+++|+.++.++++++.+.    +.++||++||..++.+.+.        
T Consensus        91 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~--------  162 (278)
T 2bgk_A           91 GKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEG--------  162 (278)
T ss_dssp             SCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTT--------
T ss_pred             CCCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccccCCCCC--------
Confidence             789999999976421  1    11345678999999999999888763    5689999999876554320        


Q ss_pred             CCCCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCCCccHHHHHHHHc------CC-
Q 025755          146 EECWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLK------GF-  215 (248)
Q Consensus       146 e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~------~~-  215 (248)
                                  +...|+.||++.+.+++.++.+   .+++++++|||+++|++..............+..      +. 
T Consensus       163 ------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (278)
T 2bgk_A          163 ------------VSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTL  230 (278)
T ss_dssp             ------------SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCSSCSCC
T ss_pred             ------------CCcchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhhhcccchhHHHHhhhccccccccc
Confidence                        1234999998877777777654   3699999999999999865432211222221111      11 


Q ss_pred             -----------CCCCCCCchhhhhhhhhccceeE
Q 025755          216 -----------FFTTPSHSYMLERTLVLNQGVRL  238 (248)
Q Consensus       216 -----------~l~~~~~~~~~g~~l~vd~g~~~  238 (248)
                                 ++..+...+++|+++.+|||...
T Consensus       231 ~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~  264 (278)
T 2bgk_A          231 LRAEDVADAVAYLAGDESKYVSGLNLVIDGGYTR  264 (278)
T ss_dssp             CCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             CCHHHHHHHHHHHcCcccccCCCCEEEECCcccc
Confidence                       44455567899999999999753

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=99.97  E-value=5.9e-32  Score=227.71  Aligned_cols=209  Identities=14%  Similarity=0.134  Sum_probs=151.8

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEE-cCCCchhhHHhhhhc-CCCCCeEEEEccCCCHH-----------
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTV-RDPCDEKNAHLKKLE-GASENLQLFKTDLLDYE-----------   69 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~-r~~~~~~~~~~~~~~-~~~~~~~~~~~Di~d~~-----------   69 (248)
                      .+++|++|||||+||||+++++.|+++|++|++++ |+... .....+.+. ....++.++.+|++|.+           
T Consensus        43 ~l~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~-~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~  121 (328)
T 2qhx_A           43 APTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAE-ANALSATLNARRPNSAITVQADLSNVATAPVSGADGSA  121 (328)
T ss_dssp             --CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHH-HHHHHHHHHHHSTTCEEEEECCCSSSCBCC-------C
T ss_pred             ccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHH-HHHHHHHHHhhcCCeEEEEEeeCCCchhcccccccccc
Confidence            46789999999999999999999999999999999 87532 222223332 22457899999999988           


Q ss_pred             ------HHHHHhC-------CCCEEEEccccCCCCCC------------------CCccccchhhhHHHHHHHHHHHHh-
Q 025755           70 ------ALCAATA-------GCTGVFHVACPVPVGKV------------------PNPEVQLIDPAVVGTKNVLNSCVK-  117 (248)
Q Consensus        70 ------~~~~~~~-------~id~vi~~ag~~~~~~~------------------~~~~~~~~~~n~~g~~~~~~~~~~-  117 (248)
                            +++++++       ++|+||||||.......                  .+.+...+++|+.++.++++++.+ 
T Consensus       122 ~~~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~  201 (328)
T 2qhx_A          122 PVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHR  201 (328)
T ss_dssp             CBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             ccccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                  8888775       78999999997653321                  223456789999999888888764 


Q ss_pred             ---cC------CCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEE
Q 025755          118 ---AK------VKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIV  185 (248)
Q Consensus       118 ---~~------~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~  185 (248)
                         .+      .++||++||..+..+.+..                     ..|+.||++.+.+.+.++.+   .+|+||
T Consensus       202 m~~~~~~~~~~~g~IV~isS~~~~~~~~~~---------------------~~Y~asKaal~~l~~~la~el~~~gIrvn  260 (328)
T 2qhx_A          202 VAGTPAKHRGTNYSIINMVDAMTNQPLLGY---------------------TIYTMAKGALEGLTRSAALELAPLQIRVN  260 (328)
T ss_dssp             HHHSCGGGSCSCEEEEEECCTTTTSCCTTC---------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred             HHhcCCcCCCCCcEEEEECchhhccCCCCc---------------------HHHHHHHHHHHHHHHHHHHHHhhcCcEEE
Confidence               34      6899999998766554332                     33999997665555555443   259999


Q ss_pred             EEccCeeecCCCCCCCCccHHHHHHHHc----C-C------------CCCCCCCchhhhhhhhhccceeE
Q 025755          186 TVCPSIVIGPMLQPTINTSSLLLLGFLK----G-F------------FFTTPSHSYMLERTLVLNQGVRL  238 (248)
Q Consensus       186 ~vrpg~i~g~~~~~~~~~~~~~~~~~~~----~-~------------~l~~~~~~~~~g~~l~vd~g~~~  238 (248)
                      +|+||++.+++ ...    +.....+..    + +            ++.++...|++|+++.||||+.+
T Consensus       261 ~v~PG~v~T~~-~~~----~~~~~~~~~~~p~~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~~  325 (328)
T 2qhx_A          261 GVGPGLSVLVD-DMP----PAVWEGHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSL  325 (328)
T ss_dssp             EEEESSBSCCC-CSC----HHHHHHHHTTCTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             EEecCcccCCc-ccc----HHHHHHHHhhCCCCCCCCCHHHHHHHHHHHhCccccCccCcEEEECCCccc
Confidence            99999999998 321    122211111    1 1            56666778999999999999753

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=99.97  E-value=5.9e-32  Score=221.16  Aligned_cols=202  Identities=16%  Similarity=0.171  Sum_probs=151.7

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC------
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA------   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~------   76 (248)
                      ++++|+++||||+||||+++++.|+++|++|++++|+...            ..++.++.+|++|.++++++++      
T Consensus         5 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~------------~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   72 (264)
T 2dtx_A            5 DLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG------------EAKYDHIECDVTNPDQVKASIDHIFKEY   72 (264)
T ss_dssp             GGTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC------------SCSSEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc------------CCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence            4688999999999999999999999999999999998642            2468899999999999888876      


Q ss_pred             -CCCEEEEccccCCCCC----CCCccccchhhhHHHHHHHHHHHHh----cCCCEEEEEeccceeccCCCCCCCCccCCC
Q 025755           77 -GCTGVFHVACPVPVGK----VPNPEVQLIDPAVVGTKNVLNSCVK----AKVKRVVVVSSIGAVMLNPNWPKGQVMDEE  147 (248)
Q Consensus        77 -~id~vi~~ag~~~~~~----~~~~~~~~~~~n~~g~~~~~~~~~~----~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~  147 (248)
                       ++|+||||||......    ..+.|...+++|+.++.++++++.+    .+.++||++||..++.+.+.          
T Consensus        73 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~----------  142 (264)
T 2dtx_A           73 GSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASIITKN----------  142 (264)
T ss_dssp             SCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGTSCCTT----------
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhccCCCC----------
Confidence             6899999999765432    1234567899999999888888765    35689999999876554432          


Q ss_pred             CCCchhhhccccchHHHHHHHHHHHHHHHHHhCC--ccEEEEccCeeecCCCCCCCC----ccH----HHHHHH----Hc
Q 025755          148 CWSDEEFCKATENYYCLAKTIAEIQALEYAKRGE--LDIVTVCPSIVIGPMLQPTIN----TSS----LLLLGF----LK  213 (248)
Q Consensus       148 ~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~~--i~v~~vrpg~i~g~~~~~~~~----~~~----~~~~~~----~~  213 (248)
                                 ...|+.||++.+.+.+.++.+.+  +++|+|+||.+.+++......    ...    .....+    ..
T Consensus       143 -----------~~~Y~~sK~a~~~~~~~la~e~~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~  211 (264)
T 2dtx_A          143 -----------ASAYVTSKHAVIGLTKSIALDYAPLLRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGHEHPM  211 (264)
T ss_dssp             -----------BHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCSHHHHHHHHHHHCSCHHHHHHHHHHHHHHSTT
T ss_pred             -----------chhHHHHHHHHHHHHHHHHHHhcCCcEEEEEEeCCCcCcchhhhhhcccccCchhhHHHHHHHHhcCCC
Confidence                       23499999877777776665432  999999999999986321100    001    111111    11


Q ss_pred             CC------------CCCCCCCchhhhhhhhhcccee
Q 025755          214 GF------------FFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       214 ~~------------~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                      ++            ++..+...|++|+++.+|||..
T Consensus       212 ~~~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~  247 (264)
T 2dtx_A          212 QRIGKPQEVASAVAFLASREASFITGTCLYVDGGLS  247 (264)
T ss_dssp             SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             CCCcCHHHHHHHHHHHhCchhcCCCCcEEEECCCcc
Confidence            11            5556667899999999999975

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=99.97  E-value=1.1e-31  Score=226.94  Aligned_cols=226  Identities=16%  Similarity=0.187  Sum_probs=165.4

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHC-CCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCC-HHHHHHHhCCCCEEEEc
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLK-GYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLD-YEALCAATAGCTGVFHV   84 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d-~~~~~~~~~~id~vi~~   84 (248)
                      |+|+||||+|+||++++++|+++ |++|++++|+.....     .+. ...++.++.+|++| .+.++++++++|+|||+
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-----~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~d~vih~   74 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAIS-----RFL-NHPHFHFVEGDISIHSEWIEYHVKKCDVVLPL   74 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGG-----GGT-TCTTEEEEECCTTTCSHHHHHHHHHCSEEEEC
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHH-----Hhh-cCCCeEEEeccccCcHHHHHhhccCCCEEEEc
Confidence            48999999999999999999998 899999999864221     111 13578999999998 46788888899999999


Q ss_pred             cccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCchh-hhccccchHH
Q 025755           85 ACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEE-FCKATENYYC  163 (248)
Q Consensus        85 ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~-~~~~~~~~Y~  163 (248)
                      ||..........+..++++|+.++.++++++.+.+ ++|||+||.. +++...   ..+++|+++..+. ....+.+.|+
T Consensus        75 A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~v~~SS~~-v~g~~~---~~~~~e~~~~~~~~~~~~~~~~Y~  149 (345)
T 2bll_A           75 VAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR-KRIIFPSTSE-VYGMCS---DKYFDEDHSNLIVGPVNKPRWIYS  149 (345)
T ss_dssp             BCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CEEEEECCGG-GGBTCC---CSSBCTTTCCCBCCCTTCGGGHHH
T ss_pred             ccccCccchhcCHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEecHH-HcCCCC---CCCcCCcccccccCcccCcccccH
Confidence            99754321123446788999999999999999988 8999999965 454422   4567777654211 1123456799


Q ss_pred             HHHHHHHHHHHHHHHhCCccEEEEccCeeecCCCCCC-------CCccHHHHHHHHcCCCCCCCCCchhhhhhhhhccce
Q 025755          164 LAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPT-------INTSSLLLLGFLKGFFFTTPSHSYMLERTLVLNQGV  236 (248)
Q Consensus       164 ~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~-------~~~~~~~~~~~~~~~~l~~~~~~~~~g~~l~vd~g~  236 (248)
                      .+|..+|.++..++.+++++++++||+.+|||.....       ......++..+..+..+....++....+.+++++..
T Consensus       150 ~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva  229 (345)
T 2bll_A          150 VSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGI  229 (345)
T ss_dssp             HHHHHHHHHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcCCCEEEEcCCcccCCCcccccccccccccHHHHHHHHHHcCCCcEEECCCCEEEEEEEHHHHH
Confidence            9999999999999877789999999999999986431       123456667777776543333333334567777766


Q ss_pred             eEEEeec
Q 025755          237 RLYRCKI  243 (248)
Q Consensus       237 ~~~~~~~  243 (248)
                      .++..++
T Consensus       230 ~a~~~~~  236 (345)
T 2bll_A          230 EALYRII  236 (345)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            5554443

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=99.97  E-value=1.3e-31  Score=218.87  Aligned_cols=212  Identities=18%  Similarity=0.144  Sum_probs=150.6

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCC-------CCeEEEEccCCCHHHHHHHh
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGAS-------ENLQLFKTDLLDYEALCAAT   75 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-------~~~~~~~~Di~d~~~~~~~~   75 (248)
                      ++++|+++||||+||||+++++.|+++|++|++++|+... .....+.+....       .++.++.+|++|.+++++++
T Consensus         4 ~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   82 (264)
T 2pd6_A            4 RLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAA-AQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLL   82 (264)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHH-HHHHHHTC------------CCEEEECCTTSHHHHHHHH
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHH-HHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHH
Confidence            4788999999999999999999999999999999998642 222222222222       56889999999999988887


Q ss_pred             CC-------C-CEEEEccccCCCCC----CCCccccchhhhHHHHHHHHHHHHhc----C-CCEEEEEeccceeccCCCC
Q 025755           76 AG-------C-TGVFHVACPVPVGK----VPNPEVQLIDPAVVGTKNVLNSCVKA----K-VKRVVVVSSIGAVMLNPNW  138 (248)
Q Consensus        76 ~~-------i-d~vi~~ag~~~~~~----~~~~~~~~~~~n~~g~~~~~~~~~~~----~-~~~iV~vSS~~~~~~~~~~  138 (248)
                      ++       + |+||||||......    ..+.+...+++|+.++.++++++.+.    + .++||++||..+..+.+. 
T Consensus        83 ~~~~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-  161 (264)
T 2pd6_A           83 EQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNVG-  161 (264)
T ss_dssp             HHHHHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHCCTT-
T ss_pred             HHHHHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhccCCCC-
Confidence            64       4 99999999765421    22345678999999999999988764    4 579999999877665432 


Q ss_pred             CCCCccCCCCCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCCCc------------
Q 025755          139 PKGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTINT------------  203 (248)
Q Consensus       139 ~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~~~------------  203 (248)
                                          ...|+.||++.+.+++.++.+   .++++++++||+++||+.......            
T Consensus       162 --------------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~  221 (264)
T 2pd6_A          162 --------------------QTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKVPQKVVDKITEMIPMG  221 (264)
T ss_dssp             --------------------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC----------CTGGGCTTC
T ss_pred             --------------------ChhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchhhcCHHHHHHHHHhCCCC
Confidence                                234999998777776666554   469999999999999975421000            


Q ss_pred             ---cHHHHHHHHcCCCCCCCCCchhhhhhhhhccceeE
Q 025755          204 ---SSLLLLGFLKGFFFTTPSHSYMLERTLVLNQGVRL  238 (248)
Q Consensus       204 ---~~~~~~~~~~~~~l~~~~~~~~~g~~l~vd~g~~~  238 (248)
                         .+.-+.....  ++..+...+++|+.+.+|||..+
T Consensus       222 ~~~~~~dva~~~~--~l~~~~~~~~~G~~~~v~gg~~~  257 (264)
T 2pd6_A          222 HLGDPEDVADVVA--FLASEDSGYITGTSVEVTGGLFM  257 (264)
T ss_dssp             SCBCHHHHHHHHH--HHHSGGGTTCCSCEEEESTTC--
T ss_pred             CCCCHHHHHHHHH--HHcCCcccCCCCCEEEECCCcee
Confidence               0111111111  34445567899999999999764

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=99.97  E-value=2.9e-31  Score=216.95  Aligned_cols=210  Identities=14%  Similarity=0.152  Sum_probs=151.9

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-------
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-------   76 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-------   76 (248)
                      +++|+++||||+||||+++++.|+++|++|++++|+... .....+.+.....++.++.+|++|.++++++++       
T Consensus         2 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~-~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   80 (264)
T 3tfo_A            2 VMDKVILITGASGGIGEGIARELGVAGAKILLGARRQAR-IEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWG   80 (264)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHH-HHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHH-HHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            678999999999999999999999999999999998642 233334444445678899999999999888875       


Q ss_pred             CCCEEEEccccCCCCC----CCCccccchhhhHHHHHHHHHHHHh----cCCCEEEEEeccceeccCCCCCCCCccCCCC
Q 025755           77 GCTGVFHVACPVPVGK----VPNPEVQLIDPAVVGTKNVLNSCVK----AKVKRVVVVSSIGAVMLNPNWPKGQVMDEEC  148 (248)
Q Consensus        77 ~id~vi~~ag~~~~~~----~~~~~~~~~~~n~~g~~~~~~~~~~----~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~  148 (248)
                      ++|+||||||......    ..+.|...+++|+.|+.++++++.+    .+.++||++||..++.+.+..          
T Consensus        81 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~----------  150 (264)
T 3tfo_A           81 RIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALSVVPTA----------  150 (264)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTC----------
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHHcccCCCC----------
Confidence            6899999999865432    1244577899999999888777754    467899999998877665442          


Q ss_pred             CCchhhhccccchHHHHHHHHHHHHHHHHHhC-CccEEEEccCeeecCCCCCCCCc--------------cHHHHHHHHc
Q 025755          149 WSDEEFCKATENYYCLAKTIAEIQALEYAKRG-ELDIVTVCPSIVIGPMLQPTINT--------------SSLLLLGFLK  213 (248)
Q Consensus       149 ~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~-~i~v~~vrpg~i~g~~~~~~~~~--------------~~~~~~~~~~  213 (248)
                                 ..|+.||++.+.+.+.++.+. ++|||+|+||.+.+++.......              .+.-+.....
T Consensus       151 -----------~~Y~asKaal~~l~~~la~e~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~  219 (264)
T 3tfo_A          151 -----------AVYCATKFAVRAISDGLRQESTNIRVTCVNPGVVESELAGTITHEETMAAMDTYRAIALQPADIARAVR  219 (264)
T ss_dssp             -----------HHHHHHHHHHHHHHHHHHHHCSSEEEEEEEECCC-----------------------CCCHHHHHHHHH
T ss_pred             -----------hhHHHHHHHHHHHHHHHHHhCCCCEEEEEecCCCcCcccccccchhHHHHHHhhhccCCCHHHHHHHHH
Confidence                       339999988888877777664 79999999999999875432110              0111111111


Q ss_pred             CCCCCCCCCchhhhhhhhhcccee
Q 025755          214 GFFFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       214 ~~~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                        ++.+....+.+++++..++|..
T Consensus       220 --~l~s~~~~~~~~~i~i~p~~~~  241 (264)
T 3tfo_A          220 --QVIEAPQSVDTTEITIRPTASG  241 (264)
T ss_dssp             --HHHHSCTTEEEEEEEEEECC--
T ss_pred             --HHhcCCccCccceEEEecCccc
Confidence              6667777888899888887765

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=99.97  E-value=9.1e-32  Score=224.55  Aligned_cols=220  Identities=13%  Similarity=0.058  Sum_probs=161.7

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHC--CCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC--CCCEE
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLK--GYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA--GCTGV   81 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~--~id~v   81 (248)
                      +|+|+||||+|+||++++++|+++  |++|++++|+....  ...       .++.++.+|++|.+++.++++  ++|+|
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~--~~~-------~~~~~~~~D~~d~~~~~~~~~~~~~d~v   72 (312)
T 2yy7_A            2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNT--DVV-------NSGPFEVVNALDFNQIEHLVEVHKITDI   72 (312)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSC--HHH-------HSSCEEECCTTCHHHHHHHHHHTTCCEE
T ss_pred             CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCccc--ccc-------CCCceEEecCCCHHHHHHHHhhcCCCEE
Confidence            478999999999999999999998  89999999976431  111       246788999999999999998  89999


Q ss_pred             EEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccccch
Q 025755           82 FHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENY  161 (248)
Q Consensus        82 i~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~  161 (248)
                      ||+||..... ....+..++++|+.++.++++++++.+.++|||+||...+....   ...+++|+.+..      |.++
T Consensus        73 ih~a~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~---~~~~~~e~~~~~------~~~~  142 (312)
T 2yy7_A           73 YLMAALLSAT-AEKNPAFAWDLNMNSLFHVLNLAKAKKIKKIFWPSSIAVFGPTT---PKENTPQYTIME------PSTV  142 (312)
T ss_dssp             EECCCCCHHH-HHHCHHHHHHHHHHHHHHHHHHHHTTSCSEEECCEEGGGCCTTS---CSSSBCSSCBCC------CCSH
T ss_pred             EECCccCCCc-hhhChHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHHhCCCC---CCCCccccCcCC------CCch
Confidence            9999975431 12344678999999999999999999889999999976543322   134566665543      3566


Q ss_pred             HHHHHHHHHHHHHHHHHhCCccEEEEccCeeecCCCCCCCC---ccHHHHHHHHcCCCCCCCCCchhhhhhhhhccceeE
Q 025755          162 YCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTIN---TSSLLLLGFLKGFFFTTPSHSYMLERTLVLNQGVRL  238 (248)
Q Consensus       162 Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~---~~~~~~~~~~~~~~l~~~~~~~~~g~~l~vd~g~~~  238 (248)
                      |+.+|..+|.++..++.+++++++++||+++|||...+...   .....+.+...+..+....++....+.+++++...+
T Consensus       143 Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a  222 (312)
T 2yy7_A          143 YGISKQAGERWCEYYHNIYGVDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAIADKKYECFLSSETKMPMMYMDDAIDA  222 (312)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCCEEECEEECEEECSSSCCCSCTTTHHHHHHHHHHHTSEEEESSCTTCCEEEEEHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHhcCCcEEEEeCCeEecCCCCCCCchhhhHHHHHHHHHcCCCeEEecCCCceeeeeeHHHHHHH
Confidence            99999999999999988778999999999999987544321   122333333333322222233334567888887776


Q ss_pred             EEeecc
Q 025755          239 YRCKIQ  244 (248)
Q Consensus       239 ~~~~~~  244 (248)
                      +..++.
T Consensus       223 ~~~~~~  228 (312)
T 2yy7_A          223 TINIMK  228 (312)
T ss_dssp             HHHHHH
T ss_pred             HHHHHh
Confidence            655554

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.97  E-value=1.6e-31  Score=218.54  Aligned_cols=208  Identities=18%  Similarity=0.168  Sum_probs=153.4

Q ss_pred             CCCCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC----
Q 025755            1 MSGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA----   76 (248)
Q Consensus         1 m~~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~----   76 (248)
                      |.++++|+++||||+||||++++++|+++|++|++++|+.+. .....+.+   ..++.++.+|++|.++++++++    
T Consensus         1 m~~l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~-~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~   76 (263)
T 2a4k_A            1 MGRLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERL-LAEAVAAL---EAEAIAVVADVSDPKAVEAVFAEALE   76 (263)
T ss_dssp             -CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHH-HHHHHHTC---CSSEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHHh---cCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            667899999999999999999999999999999999998632 22222222   2578899999999999888775    


Q ss_pred             ---CCCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHHhcC--CCEEEEEeccceeccCCCCCCCCccCCC
Q 025755           77 ---GCTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCVKAK--VKRVVVVSSIGAVMLNPNWPKGQVMDEE  147 (248)
Q Consensus        77 ---~id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~~~~--~~~iV~vSS~~~~~~~~~~~~~~~~~e~  147 (248)
                         ++|+||||||.......    .+.++..+++|+.++.++++++.+.-  .++||++||..++ +.+.          
T Consensus        77 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~-~~~~----------  145 (263)
T 2a4k_A           77 EFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGL-GAFG----------  145 (263)
T ss_dssp             HHSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTC-CHHH----------
T ss_pred             HcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecchhc-CCCC----------
Confidence               57999999998654321    23456789999999999999987752  4799999997765 3321          


Q ss_pred             CCCchhhhccccchHHHHHH----HHHHHHHHHHHhCCccEEEEccCeeecCCCCCCCCccHHHHHHHHc----CC----
Q 025755          148 CWSDEEFCKATENYYCLAKT----IAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLK----GF----  215 (248)
Q Consensus       148 ~~~~~~~~~~~~~~Y~~sK~----~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~----~~----  215 (248)
                                 ...|+.||+    +++.++.+++++ |+++++|+||.+++++.....   ......+..    ++    
T Consensus       146 -----------~~~Y~asK~a~~~~~~~la~e~~~~-gi~v~~v~PG~v~t~~~~~~~---~~~~~~~~~~~p~~~~~~p  210 (263)
T 2a4k_A          146 -----------LAHYAAGKLGVVGLARTLALELARK-GVRVNVLLPGLIQTPMTAGLP---PWAWEQEVGASPLGRAGRP  210 (263)
T ss_dssp             -----------HHHHHHCSSHHHHHHHHHHHHHTTT-TCEEEEEEECSBCCGGGTTSC---HHHHHHHHHTSTTCSCBCH
T ss_pred             -----------cHHHHHHHHHHHHHHHHHHHHhhhh-CcEEEEEEeCcCcCchhhhcC---HHHHHHHHhcCCCCCCcCH
Confidence                       234999997    455555555543 599999999999999754321   111111111    11    


Q ss_pred             --------CCCCCCCchhhhhhhhhccceeE
Q 025755          216 --------FFTTPSHSYMLERTLVLNQGVRL  238 (248)
Q Consensus       216 --------~l~~~~~~~~~g~~l~vd~g~~~  238 (248)
                              ++.++...|++|+++.+|||...
T Consensus       211 ~dvA~~v~~l~s~~~~~~tG~~i~vdgG~~~  241 (263)
T 2a4k_A          211 EEVAQAALFLLSEESAYITGQALYVDGGRSI  241 (263)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEESTTTTT
T ss_pred             HHHHHHHHHHhCccccCCcCCEEEECCCccc
Confidence                    56666678999999999999764

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=99.97  E-value=1.2e-31  Score=218.05  Aligned_cols=212  Identities=17%  Similarity=0.143  Sum_probs=153.6

Q ss_pred             CCCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-----
Q 025755            2 SGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-----   76 (248)
Q Consensus         2 ~~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-----   76 (248)
                      +++++|+++||||+||||++++++|+++|++|++++|+..+......+.+.....++.++.+|++|.++++++++     
T Consensus         3 ~~l~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   82 (258)
T 3afn_B            3 PDLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAK   82 (258)
T ss_dssp             GGGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence            457899999999999999999999999999999999983222233333333334578999999999999998887     


Q ss_pred             --CCCEEEEcccc-CCCCCC----CCccccchhhhHHHHHHHHHHHHhc----C--C---CEEEEEeccceec-cCCCCC
Q 025755           77 --GCTGVFHVACP-VPVGKV----PNPEVQLIDPAVVGTKNVLNSCVKA----K--V---KRVVVVSSIGAVM-LNPNWP  139 (248)
Q Consensus        77 --~id~vi~~ag~-~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~~~----~--~---~~iV~vSS~~~~~-~~~~~~  139 (248)
                        ++|+||||||. ......    .+.+...+++|+.++.++++++.+.    +  .   ++||++||..+.. +.+.  
T Consensus        83 ~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~--  160 (258)
T 3afn_B           83 FGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGGPG--  160 (258)
T ss_dssp             HSSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHCCCTT--
T ss_pred             cCCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccCCCCC--
Confidence              79999999997 332211    2235678899999999888877542    2  2   7999999977654 3322  


Q ss_pred             CCCccCCCCCCchhhhccccchHHHHHHHHHHHHHHHHHhC---CccEEEEccCeeecCCCCCCCCccHHHHHHHHcCC-
Q 025755          140 KGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKRG---ELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKGF-  215 (248)
Q Consensus       140 ~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~---~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~~~-  215 (248)
                                         ...|+.||++.+.+++.++.+.   ++++++++||.++|++....   ...+...+..+. 
T Consensus       161 -------------------~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~---~~~~~~~~~~~~~  218 (258)
T 3afn_B          161 -------------------AGLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHADK---TQDVRDRISNGIP  218 (258)
T ss_dssp             -------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTTC---CHHHHHHHHTTCT
T ss_pred             -------------------chHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCccccccccc---CHHHHHHHhccCC
Confidence                               2349999998888877776543   69999999999999976532   223333333221 


Q ss_pred             ---------------CCCCCCCc-hhhhhhhhhcccee
Q 025755          216 ---------------FFTTPSHS-YMLERTLVLNQGVR  237 (248)
Q Consensus       216 ---------------~l~~~~~~-~~~g~~l~vd~g~~  237 (248)
                                     ++..+... +++|+++.+|||..
T Consensus       219 ~~~~~~~~dva~~~~~l~~~~~~~~~~G~~~~v~gg~~  256 (258)
T 3afn_B          219 MGRFGTAEEMAPAFLFFASHLASGYITGQVLDINGGQY  256 (258)
T ss_dssp             TCSCBCGGGTHHHHHHHHCHHHHTTCCSEEEEESTTSS
T ss_pred             CCcCCCHHHHHHHHHHHhCcchhccccCCEEeECCCcc
Confidence                           22222233 78899999999864

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=99.97  E-value=5.8e-31  Score=214.10  Aligned_cols=206  Identities=18%  Similarity=0.137  Sum_probs=154.6

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCC--CeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-------
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKG--YMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-------   76 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-------   76 (248)
                      +|+++||||+||||++++++|+++|  +.|++.+|+... .....+.+   ..++.++.+|++|.++++++++       
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~-~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   77 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAP-LKKLKEKY---GDRFFYVVGDITEDSVLKQLVNAAVKGHG   77 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHH-HHHHHHHH---GGGEEEEESCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHH-HHHHHHHh---CCceEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            6899999999999999999999985  788888887632 22222222   3578999999999999988876       


Q ss_pred             CCCEEEEccccCCC-CC----CCCccccchhhhHHHHHHHHHHHH----hcCCCEEEEEeccceeccCCCCCCCCccCCC
Q 025755           77 GCTGVFHVACPVPV-GK----VPNPEVQLIDPAVVGTKNVLNSCV----KAKVKRVVVVSSIGAVMLNPNWPKGQVMDEE  147 (248)
Q Consensus        77 ~id~vi~~ag~~~~-~~----~~~~~~~~~~~n~~g~~~~~~~~~----~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~  147 (248)
                      ++|+||||||.... ..    ..+.|+..+++|+.|+.++++++.    +.+ ++||++||..+..+.+..         
T Consensus        78 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-g~iv~isS~~~~~~~~~~---------  147 (254)
T 3kzv_A           78 KIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTN-GNVVFVSSDACNMYFSSW---------  147 (254)
T ss_dssp             CCCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCSCCCCSSCCS---------
T ss_pred             CccEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEcCchhccCCCCc---------
Confidence            68999999998543 21    124456789999999999988884    335 899999998876655432         


Q ss_pred             CCCchhhhccccchHHHHHHHHHHHHHHHHHhC-CccEEEEccCeeecCCCCCCCC------ccHHHHHHH----HcCC-
Q 025755          148 CWSDEEFCKATENYYCLAKTIAEIQALEYAKRG-ELDIVTVCPSIVIGPMLQPTIN------TSSLLLLGF----LKGF-  215 (248)
Q Consensus       148 ~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~-~i~v~~vrpg~i~g~~~~~~~~------~~~~~~~~~----~~~~-  215 (248)
                                  ..|+.||++.+.+.+.++.+. ++|||+|+||.+.+++......      ........+    ..++ 
T Consensus       148 ------------~~Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  215 (254)
T 3kzv_A          148 ------------GAYGSSKAALNHFAMTLANEERQVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLKMFRGLKENNQL  215 (254)
T ss_dssp             ------------HHHHHHHHHHHHHHHHHHHHCTTSEEEEEECSSCCCCCSCCCCCCCCTTTSCHHHHHHHHHHHTTC--
T ss_pred             ------------chHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcccchhHHHhhcccCccccCHHHHHHHHHHHhcCCc
Confidence                        339999998888888888664 7999999999999998654311      012222111    1121 


Q ss_pred             -----------CCCCCC-Cchhhhhhhhhcccee
Q 025755          216 -----------FFTTPS-HSYMLERTLVLNQGVR  237 (248)
Q Consensus       216 -----------~l~~~~-~~~~~g~~l~vd~g~~  237 (248)
                                 ++.++. ..|+||+.+.+|||..
T Consensus       216 ~~p~dva~~v~~L~s~~~~~~itG~~i~vdg~~~  249 (254)
T 3kzv_A          216 LDSSVPATVYAKLALHGIPDGVNGQYLSYNDPAL  249 (254)
T ss_dssp             --CHHHHHHHHHHHHHCCCGGGTTCEEETTCGGG
T ss_pred             CCcccHHHHHHHHHhhcccCCCCccEEEecCccc
Confidence                       677777 4999999999999864

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=99.97  E-value=1.8e-31  Score=219.82  Aligned_cols=214  Identities=14%  Similarity=0.072  Sum_probs=153.2

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCC-----
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAG-----   77 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~-----   77 (248)
                      ++++|+++||||+||||++++++|+++|++|++++|+..... ...+.+.....++.++.+|++|.+++++++++     
T Consensus        31 ~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~  109 (279)
T 3ctm_A           31 SLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADE-KAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKDF  109 (279)
T ss_dssp             CCTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHH-HHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHHh
Confidence            478899999999999999999999999999999999875322 22222222245789999999999998888764     


Q ss_pred             --CCEEEEccccCCC-CCC-----CCccccchhhhHHHH----HHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccC
Q 025755           78 --CTGVFHVACPVPV-GKV-----PNPEVQLIDPAVVGT----KNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMD  145 (248)
Q Consensus        78 --id~vi~~ag~~~~-~~~-----~~~~~~~~~~n~~g~----~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~  145 (248)
                        +|+||||||.... ...     .+.+...+++|+.++    +++++.+++.+.++||++||..+..+...        
T Consensus       110 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~--------  181 (279)
T 3ctm_A          110 GTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKGSLIITSSISGKIVNIP--------  181 (279)
T ss_dssp             SCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCCTTSCC-----------
T ss_pred             CCCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEECchHhccCCCC--------
Confidence              8999999997654 211     123456889999995    56666666667789999999775443100        


Q ss_pred             CCCCCchhhhccccchHHHHHHHHHHHHHHHHHhC---CccEEEEccCeeecCCCCCCCCcc-HHHHHHHHcCC------
Q 025755          146 EECWSDEEFCKATENYYCLAKTIAEIQALEYAKRG---ELDIVTVCPSIVIGPMLQPTINTS-SLLLLGFLKGF------  215 (248)
Q Consensus       146 e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~---~i~v~~vrpg~i~g~~~~~~~~~~-~~~~~~~~~~~------  215 (248)
                                 .+...|+.||++.+.+++.++.++   + ++++|+||.+.+++........ ..+......++      
T Consensus       182 -----------~~~~~Y~~sK~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~p~~~~~~~~d  249 (279)
T 3ctm_A          182 -----------QLQAPYNTAKAACTHLAKSLAIEWAPFA-RVNTISPGYIDTDITDFASKDMKAKWWQLTPLGREGLTQE  249 (279)
T ss_dssp             -----------CCHHHHHHHHHHHHHHHHHHHHHTTTTC-EEEEEEECSBSSTTTSSCCHHHHHHHHHHSTTCSCBCGGG
T ss_pred             -----------CCcccHHHHHHHHHHHHHHHHHHhcccC-CEEEEeccCCccccccccChHHHHHHHHhCCccCCcCHHH
Confidence                       012449999998888888887653   5 9999999999999764221110 11111111111      


Q ss_pred             ------CCCCCCCchhhhhhhhhcccee
Q 025755          216 ------FFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       216 ------~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                            ++..+...+++|+++.+|||+.
T Consensus       250 vA~~~~~l~s~~~~~~tG~~i~vdgG~~  277 (279)
T 3ctm_A          250 LVGGYLYLASNASTFTTGSDVVIDGGYT  277 (279)
T ss_dssp             THHHHHHHHSGGGTTCCSCEEEESTTCC
T ss_pred             HHHHHHHHhCccccCccCCEEEECCCee
Confidence                  4555556889999999999975

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=99.97  E-value=1.3e-31  Score=219.77  Aligned_cols=209  Identities=16%  Similarity=0.143  Sum_probs=151.4

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC------
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA------   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~------   76 (248)
                      ++++|+++||||+||||+++++.|+++|++|++++|+.... ....+.+    .++.++.+|++|.++++++++      
T Consensus         6 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~-~~~~~~~----~~~~~~~~Dv~d~~~v~~~~~~~~~~~   80 (270)
T 1yde_A            6 RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGG-RALEQEL----PGAVFILCDVTQEDDVKTLVSETIRRF   80 (270)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHHC----TTEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHHh----cCCeEEEcCCCCHHHHHHHHHHHHHHc
Confidence            46789999999999999999999999999999999976322 1222222    247889999999999988876      


Q ss_pred             -CCCEEEEccccCCCCC-----CCCccccchhhhHHHHHHHHHHHHhc---CCCEEEEEeccceeccCCCCCCCCccCCC
Q 025755           77 -GCTGVFHVACPVPVGK-----VPNPEVQLIDPAVVGTKNVLNSCVKA---KVKRVVVVSSIGAVMLNPNWPKGQVMDEE  147 (248)
Q Consensus        77 -~id~vi~~ag~~~~~~-----~~~~~~~~~~~n~~g~~~~~~~~~~~---~~~~iV~vSS~~~~~~~~~~~~~~~~~e~  147 (248)
                       ++|+||||||......     ..+.|+..+++|+.++.++++++.+.   +.++||++||..+.++.+..         
T Consensus        81 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~---------  151 (270)
T 1yde_A           81 GRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQAQA---------  151 (270)
T ss_dssp             SCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHCCTTC---------
T ss_pred             CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEcCccccCCCCCC---------
Confidence             6899999999764321     12345678999999999999988653   35799999998776665432         


Q ss_pred             CCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCC---CCccHHHHHH----HHcCC--
Q 025755          148 CWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPT---INTSSLLLLG----FLKGF--  215 (248)
Q Consensus       148 ~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~---~~~~~~~~~~----~~~~~--  215 (248)
                                  ..|+.||+..+.+.+.++.+   +|+++|+|+||+++||+....   .......+..    ...++  
T Consensus       152 ------------~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~  219 (270)
T 1yde_A          152 ------------VPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLGRMG  219 (270)
T ss_dssp             ------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTTSSCB
T ss_pred             ------------cccHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCccccchhhhhhhcccchHHHHHHHhhcCCCCCCc
Confidence                        23999998666666665543   369999999999999863210   0011111111    01111  


Q ss_pred             ----------CCCCCCCchhhhhhhhhccceeE
Q 025755          216 ----------FFTTPSHSYMLERTLVLNQGVRL  238 (248)
Q Consensus       216 ----------~l~~~~~~~~~g~~l~vd~g~~~  238 (248)
                                ++.++ ..|+||+.+.||||+.+
T Consensus       220 ~p~dva~~v~~L~s~-~~~itG~~i~vdGG~~~  251 (270)
T 1yde_A          220 QPAEVGAAAVFLASE-ANFCTGIELLVTGGAEL  251 (270)
T ss_dssp             CHHHHHHHHHHHHHH-CTTCCSCEEEESTTTTS
T ss_pred             CHHHHHHHHHHHccc-CCCcCCCEEEECCCeec
Confidence                      55565 68999999999999753

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=99.97  E-value=2.8e-31  Score=214.43  Aligned_cols=210  Identities=20%  Similarity=0.168  Sum_probs=152.1

Q ss_pred             CCCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC---CC
Q 025755            2 SGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA---GC   78 (248)
Q Consensus         2 ~~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~---~i   78 (248)
                      +++++|+++||||+||||++++++|+++|++|++++|+..+. ....+.+    .+..++.+|++|.++++++++   ++
T Consensus         3 ~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~-~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~i   77 (244)
T 3d3w_A            3 LFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADL-DSLVREC----PGIEPVCVDLGDWEATERALGSVGPV   77 (244)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHHS----TTCEEEECCTTCHHHHHHHHTTCCCC
T ss_pred             cccCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHHc----CCCCEEEEeCCCHHHHHHHHHHcCCC
Confidence            457899999999999999999999999999999999976321 1222221    246778999999999999986   58


Q ss_pred             CEEEEccccCCCCC----CCCccccchhhhHHHHHHHHHHHHhc----C-CCEEEEEeccceeccCCCCCCCCccCCCCC
Q 025755           79 TGVFHVACPVPVGK----VPNPEVQLIDPAVVGTKNVLNSCVKA----K-VKRVVVVSSIGAVMLNPNWPKGQVMDEECW  149 (248)
Q Consensus        79 d~vi~~ag~~~~~~----~~~~~~~~~~~n~~g~~~~~~~~~~~----~-~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~  149 (248)
                      |+||||||......    ..+.+...+++|+.++.++++++.+.    + .++||++||..++.+.+.            
T Consensus        78 d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~------------  145 (244)
T 3d3w_A           78 DLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTN------------  145 (244)
T ss_dssp             CEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTT------------
T ss_pred             CEEEECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhccCCCC------------
Confidence            99999999764321    12345678999999999888887653    4 689999999776544322            


Q ss_pred             CchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCC---CCccHHHHHHHHcCC--------
Q 025755          150 SDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPT---INTSSLLLLGFLKGF--------  215 (248)
Q Consensus       150 ~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~---~~~~~~~~~~~~~~~--------  215 (248)
                               ...|+.||++.+.+++.++.+   .++++++++||.++|++....   ......+......++        
T Consensus       146 ---------~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva  216 (244)
T 3d3w_A          146 ---------HSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVV  216 (244)
T ss_dssp             ---------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTTTHHHHSCSTTHHHHHHHTCTTCSCBCHHHHH
T ss_pred             ---------CchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccccccchhhhccChHHHHHHHhhCCCCCCcCHHHHH
Confidence                     234999999888887777654   369999999999999874311   111011111111111        


Q ss_pred             ----CCCCCCCchhhhhhhhhcccee
Q 025755          216 ----FFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       216 ----~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                          ++..+...+++|+++.+|||+.
T Consensus       217 ~~~~~l~~~~~~~~~G~~~~v~gG~~  242 (244)
T 3d3w_A          217 NAILFLLSDRSGMTTGSTLPVEGGFW  242 (244)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHcCccccCCCCCEEEECCCcc
Confidence                4444455789999999999964

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=99.97  E-value=3e-31  Score=225.68  Aligned_cols=220  Identities=16%  Similarity=0.106  Sum_probs=163.0

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCC-CeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-----
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKG-YMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-----   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-----   76 (248)
                      .+++|+|+||||+||||++++++|+++| ++|++++|+.....   ...+    .++. +.+|++|.+.++.+++     
T Consensus        43 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~---~~~~----~~~~-~~~d~~~~~~~~~~~~~~~~~  114 (357)
T 2x6t_A           43 GIEGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK---FVNL----VDLN-IADYMDKEDFLIQIMAGEEFG  114 (357)
T ss_dssp             -----CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGG---GGGT----TTSC-CSEEEEHHHHHHHHHTTCCCS
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcch---hhcc----cCce-EeeecCcHHHHHHHHhhcccC
Confidence            3567899999999999999999999999 99999999764321   1111    1222 6789999999999987     


Q ss_pred             CCCEEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhc
Q 025755           77 GCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCK  156 (248)
Q Consensus        77 ~id~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~  156 (248)
                      ++|+|||+||....  ....+..++++|+.++.++++++.+.+. +|||+||... ++...   ..+++|+.+..     
T Consensus       115 ~~d~Vih~A~~~~~--~~~~~~~~~~~n~~~~~~ll~a~~~~~~-r~V~~SS~~v-~g~~~---~~~~~E~~~~~-----  182 (357)
T 2x6t_A          115 DVEAIFHEGACSST--TEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAAT-YGGRT---SDFIESREYEK-----  182 (357)
T ss_dssp             SCCEEEECCSCCCT--TCCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEEGGG-GCSCS---SCCCSSGGGCC-----
T ss_pred             CCCEEEECCcccCC--ccCCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcchHH-hCCCC---CCCcCCcCCCC-----
Confidence            59999999997654  2345578899999999999999999888 9999999764 44321   34566665443     


Q ss_pred             cccchHHHHHHHHHHHHHHHHHhCCccEEEEccCeeecCCCCCC---CCccHHHHHHHHcCCCCCCCCCchh-hhhhhhh
Q 025755          157 ATENYYCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPT---INTSSLLLLGFLKGFFFTTPSHSYM-LERTLVL  232 (248)
Q Consensus       157 ~~~~~Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~-~g~~l~v  232 (248)
                       |.+.|+.+|..+|.++..++.+++++++++||+++|||.....   ......++..+..+..+....++.. ..+.+++
T Consensus       183 -p~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  261 (357)
T 2x6t_A          183 -PLNVFGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYV  261 (357)
T ss_dssp             -CSSHHHHHHHHHHHHHHHHGGGCSSCEEEEEECEEESSSCTTCGGGSCHHHHHHHHHHTTCCCEEETTGGGCEECEEEH
T ss_pred             -CCChhHHHHHHHHHHHHHHHHHcCCCEEEEecCeEECCCCCCCcccchHHHHHHHHHHcCCCcEEeCCCCcceEccEEH
Confidence             3566999999999999999988889999999999999986532   1344566677777765443334433 4566788


Q ss_pred             ccceeEEEeec
Q 025755          233 NQGVRLYRCKI  243 (248)
Q Consensus       233 d~g~~~~~~~~  243 (248)
                      ++...++..++
T Consensus       262 ~Dva~ai~~~~  272 (357)
T 2x6t_A          262 GDVADVNLWFL  272 (357)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHH
Confidence            87766554443

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=99.97  E-value=4.1e-31  Score=215.92  Aligned_cols=209  Identities=15%  Similarity=0.123  Sum_probs=149.4

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC------
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA------   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~------   76 (248)
                      ++++|+++||||+||||++++++|+++|++|++++|+..... ...+.+   ..++.++.+|++|.++++++++      
T Consensus         9 ~~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~-~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~   84 (265)
T 2o23_A            9 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGE-AQAKKL---GNNCVFAPADVTSEKDVQTALALAKGKF   84 (265)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHH-HHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHH-HHHHHh---CCceEEEEcCCCCHHHHHHHHHHHHHHC
Confidence            478899999999999999999999999999999999875332 222222   3578999999999999998887      


Q ss_pred             -CCCEEEEccccCCCCC----------CCCccccchhhhHHHHHHHHHHHHhc----------CCCEEEEEeccceeccC
Q 025755           77 -GCTGVFHVACPVPVGK----------VPNPEVQLIDPAVVGTKNVLNSCVKA----------KVKRVVVVSSIGAVMLN  135 (248)
Q Consensus        77 -~id~vi~~ag~~~~~~----------~~~~~~~~~~~n~~g~~~~~~~~~~~----------~~~~iV~vSS~~~~~~~  135 (248)
                       ++|+||||||......          ..+.+...+++|+.++.++++++.+.          +.++||++||..++.+.
T Consensus        85 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~  164 (265)
T 2o23_A           85 GRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQ  164 (265)
T ss_dssp             SCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCC
T ss_pred             CCCCEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChhhcCCC
Confidence             7999999999765431          12335678999999999999988764          56899999998776654


Q ss_pred             CCCCCCCccCCCCCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCCCccHHHHHHHH
Q 025755          136 PNWPKGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTINTSSLLLLGFL  212 (248)
Q Consensus       136 ~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~  212 (248)
                      +.                     ...|+.||++.+.+++.++.+   .++++++|+||++.+++...........+....
T Consensus       165 ~~---------------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~  223 (265)
T 2o23_A          165 VG---------------------QAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPEKVCNFLASQV  223 (265)
T ss_dssp             TT---------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC----------CHHHHTC
T ss_pred             CC---------------------CchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCccccccCHHHHHHHHHcC
Confidence            33                     234999998655555555443   259999999999999875421110000011100


Q ss_pred             -c-CC------------CCCCCCCchhhhhhhhhccceeE
Q 025755          213 -K-GF------------FFTTPSHSYMLERTLVLNQGVRL  238 (248)
Q Consensus       213 -~-~~------------~l~~~~~~~~~g~~l~vd~g~~~  238 (248)
                       . ++            ++.  .+.+++|+.+.+|||+.+
T Consensus       224 ~~~~~~~~~~dva~~~~~l~--~~~~~~G~~i~vdgG~~~  261 (265)
T 2o23_A          224 PFPSRLGDPAEYAHLVQAII--ENPFLNGEVIRLDGAIRM  261 (265)
T ss_dssp             SSSCSCBCHHHHHHHHHHHH--HCTTCCSCEEEESTTCCC
T ss_pred             CCcCCCCCHHHHHHHHHHHh--hcCccCceEEEECCCEec
Confidence             0 11            222  357899999999999764

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=99.97  E-value=1.5e-31  Score=215.90  Aligned_cols=208  Identities=19%  Similarity=0.123  Sum_probs=152.8

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC---CCC
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA---GCT   79 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~---~id   79 (248)
                      ++++|+++||||+||||++++++|+++|++|++++|+.... ....+.    ..++.++.+|++|.++++++++   ++|
T Consensus         4 ~~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~-~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~id   78 (244)
T 1cyd_A            4 NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDL-VSLAKE----CPGIEPVCVDLGDWDATEKALGGIGPVD   78 (244)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHH----STTCEEEECCTTCHHHHHHHHTTCCCCS
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHh----ccCCCcEEecCCCHHHHHHHHHHcCCCC
Confidence            57889999999999999999999999999999999986322 111111    1356778999999999999987   489


Q ss_pred             EEEEccccCCCCC----CCCccccchhhhHHHHHHHHHHHHhc----C-CCEEEEEeccceeccCCCCCCCCccCCCCCC
Q 025755           80 GVFHVACPVPVGK----VPNPEVQLIDPAVVGTKNVLNSCVKA----K-VKRVVVVSSIGAVMLNPNWPKGQVMDEECWS  150 (248)
Q Consensus        80 ~vi~~ag~~~~~~----~~~~~~~~~~~n~~g~~~~~~~~~~~----~-~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~  150 (248)
                      +||||||......    ..+.+...+++|+.++.++++++.+.    + .++||++||..++.+.+.             
T Consensus        79 ~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~-------------  145 (244)
T 1cyd_A           79 LLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPN-------------  145 (244)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTT-------------
T ss_pred             EEEECCcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCCCCC-------------
Confidence            9999999765321    12345678999999999988887654    4 689999999776544322             


Q ss_pred             chhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCCCccHHHHHHHHcC----C--------
Q 025755          151 DEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKG----F--------  215 (248)
Q Consensus       151 ~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~~----~--------  215 (248)
                              ...|+.||++.+.+++.++.+   .++++++++||.++|++..... ....++..+..+    .        
T Consensus       146 --------~~~Y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~dva  216 (244)
T 1cyd_A          146 --------LITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVS-ADPEFARKLKERHPLRKFAEVEDVV  216 (244)
T ss_dssp             --------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHT-CCHHHHHHHHHHSTTSSCBCHHHHH
T ss_pred             --------cchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCccccccc-cCHHHHHHHHhcCCccCCCCHHHHH
Confidence                    234999999888888777765   3699999999999998643110 112222222111    1        


Q ss_pred             ----CCCCCCCchhhhhhhhhcccee
Q 025755          216 ----FFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       216 ----~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                          ++..+...+++|+.+.+|||+.
T Consensus       217 ~~~~~l~~~~~~~~~G~~~~v~gG~~  242 (244)
T 1cyd_A          217 NSILFLLSDRSASTSGGGILVDAGYL  242 (244)
T ss_dssp             HHHHHHHSGGGTTCCSSEEEESTTGG
T ss_pred             HHHHHHhCchhhcccCCEEEECCCcc
Confidence                3444556789999999999964

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=99.97  E-value=2.7e-31  Score=215.88  Aligned_cols=202  Identities=19%  Similarity=0.173  Sum_probs=145.2

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC------
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA------   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~------   76 (248)
                      .+++|+++||||+||||++++++|+++|++|++++|+.+..            ..+.++.+|++|.++++++++      
T Consensus        18 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~------------~~~~~~~~Dl~d~~~v~~~~~~~~~~~   85 (253)
T 2nm0_A           18 SHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPP------------EGFLAVKCDITDTEQVEQAYKEIEETH   85 (253)
T ss_dssp             --CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCC------------TTSEEEECCTTSHHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhh------------ccceEEEecCCCHHHHHHHHHHHHHHc
Confidence            46789999999999999999999999999999999976421            237889999999999888775      


Q ss_pred             -CCCEEEEccccCCCCC----CCCccccchhhhHHHHHHHHHHHHh----cCCCEEEEEeccceeccCCCCCCCCccCCC
Q 025755           77 -GCTGVFHVACPVPVGK----VPNPEVQLIDPAVVGTKNVLNSCVK----AKVKRVVVVSSIGAVMLNPNWPKGQVMDEE  147 (248)
Q Consensus        77 -~id~vi~~ag~~~~~~----~~~~~~~~~~~n~~g~~~~~~~~~~----~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~  147 (248)
                       ++|+||||||......    ..+.+...+++|+.++.++++++.+    .+.++||++||..+..+.+.          
T Consensus        86 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~----------  155 (253)
T 2nm0_A           86 GPVEVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLLGSAG----------  155 (253)
T ss_dssp             CSCSEEEEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCCCCCHHH----------
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCCC----------
Confidence             4799999999865331    2456678999999999988887754    36789999999776544321          


Q ss_pred             CCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCCCcc-HHHHHHHHcCC--------
Q 025755          148 CWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTINTS-SLLLLGFLKGF--------  215 (248)
Q Consensus       148 ~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~~~~-~~~~~~~~~~~--------  215 (248)
                                 ...|+.||++.+.+.+.++.+   .++++++|+||.+.+++........ ..+......++        
T Consensus       156 -----------~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA  224 (253)
T 2nm0_A          156 -----------QANYAASKAGLVGFARSLARELGSRNITFNVVAPGFVDTDMTKVLTDEQRANIVSQVPLGRYARPEEIA  224 (253)
T ss_dssp             -----------HHHHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEECSBCC---------CHHHHHTTCTTCSCBCHHHHH
T ss_pred             -----------cHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcCHHHHHHHHhcCCCCCCcCHHHHH
Confidence                       234999998666666655543   3699999999999998754211100 00100000011        


Q ss_pred             ----CCCCCCCchhhhhhhhhcccee
Q 025755          216 ----FFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       216 ----~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                          ++..+...|++|+++.+|||..
T Consensus       225 ~~i~~l~s~~~~~~tG~~i~vdGG~~  250 (253)
T 2nm0_A          225 ATVRFLASDDASYITGAVIPVDGGLG  250 (253)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred             HHHHHHhCccccCCcCcEEEECCccc
Confidence                5556667899999999999975

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=99.97  E-value=7.6e-31  Score=216.87  Aligned_cols=210  Identities=15%  Similarity=0.138  Sum_probs=151.3

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC------
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA------   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~------   76 (248)
                      .+++|+++||||+||||+++++.|+++|++|++++|+... .....+.+.....++.++.+|++|.++++++++      
T Consensus        41 ~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~-~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~  119 (285)
T 2c07_A           41 CGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKS-CDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEH  119 (285)
T ss_dssp             CCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHH-HHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHC
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHH-HHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhc
Confidence            3678999999999999999999999999999998887532 223333344445678999999999999988874      


Q ss_pred             -CCCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHHh----cCCCEEEEEeccceeccCCCCCCCCccCCC
Q 025755           77 -GCTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCVK----AKVKRVVVVSSIGAVMLNPNWPKGQVMDEE  147 (248)
Q Consensus        77 -~id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~~----~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~  147 (248)
                       ++|+||||||.......    .+.+...+++|+.++.++++++.+    .+.++||++||..++.+.+..         
T Consensus       120 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~---------  190 (285)
T 2c07_A          120 KNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQ---------  190 (285)
T ss_dssp             SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTC---------
T ss_pred             CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCCCC---------
Confidence             68999999998654321    234567899999998887777653    467899999998777665432         


Q ss_pred             CCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCCCccHHHHHHHHcC----C-----
Q 025755          148 CWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKG----F-----  215 (248)
Q Consensus       148 ~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~~----~-----  215 (248)
                                  ..|+.||++.+.+++.++.+   .++++++|+||.+++++....   ...........    +     
T Consensus       191 ------------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~---~~~~~~~~~~~~~~~~~~~~~  255 (285)
T 2c07_A          191 ------------ANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKI---SEQIKKNIISNIPAGRMGTPE  255 (285)
T ss_dssp             ------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----C---CHHHHHHHHTTCTTSSCBCHH
T ss_pred             ------------chHHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCchhhc---CHHHHHHHHhhCCCCCCCCHH
Confidence                        33999998666666655543   269999999999999875432   11111111111    1     


Q ss_pred             -------CCCCCCCchhhhhhhhhcccee
Q 025755          216 -------FFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       216 -------~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                             ++..+...+++|+++.+|||+.
T Consensus       256 dvA~~~~~l~~~~~~~~~G~~i~v~gG~~  284 (285)
T 2c07_A          256 EVANLACFLSSDKSGYINGRVFVIDGGLS  284 (285)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESTTSC
T ss_pred             HHHHHHHHHhCCCcCCCCCCEEEeCCCcc
Confidence                   4555566789999999999974

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=99.97  E-value=1.2e-30  Score=222.91  Aligned_cols=230  Identities=17%  Similarity=0.099  Sum_probs=166.9

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcC----CCCCeEEEEccCCCHHHHHHHhCC--CC
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEG----ASENLQLFKTDLLDYEALCAATAG--CT   79 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~~Di~d~~~~~~~~~~--id   79 (248)
                      ||+|+||||+||||++++++|+++|++|++++|+........++.+..    ...++.++.+|++|.+++.+++++  +|
T Consensus         1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d   80 (372)
T 1db3_A            1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPD   80 (372)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCS
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhcCCC
Confidence            579999999999999999999999999999999764211111121111    135788999999999999998875  79


Q ss_pred             EEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCC---CEEEEEeccceeccCCCCCCCCccCCCCCCchhhhc
Q 025755           80 GVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKV---KRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCK  156 (248)
Q Consensus        80 ~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~---~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~  156 (248)
                      +||||||........+.+...+++|+.++.++++++.+.+.   ++||++||... ++...   ..+++|+++..+    
T Consensus        81 ~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~SS~~v-~g~~~---~~~~~E~~~~~~----  152 (372)
T 1db3_A           81 EVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSEL-YGLVQ---EIPQKETTPFYP----  152 (372)
T ss_dssp             EEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGG-GTTCC---SSSBCTTSCCCC----
T ss_pred             EEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCChhh-hCCCC---CCCCCccCCCCC----
Confidence            99999998655434455567889999999999999999877   89999999654 44322   456777766544    


Q ss_pred             cccchHHHHHHHHHHHHHHHHHhCCccEEEEccCeeecCCCCCCC--CccHHHHHHHHcCCC-CCCCCCchhhhhhhhhc
Q 025755          157 ATENYYCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTI--NTSSLLLLGFLKGFF-FTTPSHSYMLERTLVLN  233 (248)
Q Consensus       157 ~~~~~Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~--~~~~~~~~~~~~~~~-l~~~~~~~~~g~~l~vd  233 (248)
                        .+.|+.||..+|.+++.++.+++++++++||+.+|||......  .....++..+..+.. .....++....+.+++|
T Consensus       153 --~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~  230 (372)
T 1db3_A          153 --RSPYAVAKLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAK  230 (372)
T ss_dssp             --CSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHH
T ss_pred             --CChHHHHHHHHHHHHHHHHHHhCCCeEEEEECCccCCCCCCcchhhHHHHHHHHHHcCCCCceeecCCCceeeeeEHH
Confidence              4569999999999999999887899999999999999765321  123345555666653 22223334445678898


Q ss_pred             cceeEEEeeccC
Q 025755          234 QGVRLYRCKIQI  245 (248)
Q Consensus       234 ~g~~~~~~~~~~  245 (248)
                      +...++..+++.
T Consensus       231 Dva~a~~~~~~~  242 (372)
T 1db3_A          231 DYVKMQWMMLQQ  242 (372)
T ss_dssp             HHHHHHHHTTSS
T ss_pred             HHHHHHHHHHhc
Confidence            887776666554

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=99.97  E-value=7.5e-32  Score=218.04  Aligned_cols=202  Identities=19%  Similarity=0.185  Sum_probs=150.8

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHH-CCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-----C
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLL-KGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-----G   77 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~-~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-----~   77 (248)
                      .+||+++||||+||||+++++.|++ .|++|++.+|+....           ...+.++.+|++|.++++++++     +
T Consensus         2 ~~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~-----------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   70 (244)
T 4e4y_A            2 NAMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFS-----------AENLKFIKADLTKQQDITNVLDIIKNVS   70 (244)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCC-----------CTTEEEEECCTTCHHHHHHHHHHTTTCC
T ss_pred             CCCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEeccccccc-----------cccceEEecCcCCHHHHHHHHHHHHhCC
Confidence            5789999999999999999999999 789999998876311           2457899999999999999886     6


Q ss_pred             CCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHHhc--CCCEEEEEeccceeccCCCCCCCCccCCCCCCc
Q 025755           78 CTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCVKA--KVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSD  151 (248)
Q Consensus        78 id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~~~--~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~  151 (248)
                      +|+||||||.......    .+.|+..+++|+.++.++++++.+.  ..++||++||..++.+.+..             
T Consensus        71 id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~-------------  137 (244)
T 4e4y_A           71 FDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSDQCFIAKPNS-------------  137 (244)
T ss_dssp             EEEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCGGGTCCCTTB-------------
T ss_pred             CCEEEECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECCHHHccCCCCC-------------
Confidence            8999999998654322    2445678999999999999999876  23699999998876655432             


Q ss_pred             hhhhccccchHHHHHHHHHHHHHHHHH---hCCccEEEEccCeeecCCCCCCCCc--------cHHHHHHHHcC----C-
Q 025755          152 EEFCKATENYYCLAKTIAEIQALEYAK---RGELDIVTVCPSIVIGPMLQPTINT--------SSLLLLGFLKG----F-  215 (248)
Q Consensus       152 ~~~~~~~~~~Y~~sK~~~e~l~~~~~~---~~~i~v~~vrpg~i~g~~~~~~~~~--------~~~~~~~~~~~----~-  215 (248)
                              ..|+.||++.+.+.+.++.   ..|+++++|+||.+.+|+.......        ...........    + 
T Consensus       138 --------~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~  209 (244)
T 4e4y_A          138 --------FAYTLSKGAIAQMTKSLALDLAKYQIRVNTVCPGTVDTDLYRNLIQKYANNVGISFDEAQKQEEKEFPLNRI  209 (244)
T ss_dssp             --------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESCBCCHHHHHHHHHHHHHHTCCHHHHHHHHHTTSTTSSC
T ss_pred             --------chhHHHHHHHHHHHHHHHHHHHHcCeEEEEEecCccCchhhHHHHHhhhhhcCCCHHHHHHHHhhcCCCCCC
Confidence                    3499999766666555554   2369999999999999864321000        00011111111    0 


Q ss_pred             -----------CCCCCCCchhhhhhhhhcccee
Q 025755          216 -----------FFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       216 -----------~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                                 ++.++...|++|+++.||||+.
T Consensus       210 ~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG~~  242 (244)
T 4e4y_A          210 AQPQEIAELVIFLLSDKSKFMTGGLIPIDGGYT  242 (244)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             cCHHHHHHHHHHHhcCccccccCCeEeECCCcc
Confidence                       6777778999999999999975

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=99.97  E-value=6.1e-31  Score=216.26  Aligned_cols=210  Identities=13%  Similarity=0.080  Sum_probs=149.6

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCch------hhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDE------KNAHLKKLEGASENLQLFKTDLLDYEALCAATA   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~------~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~   76 (248)
                      ++++|+++||||++|||+++++.|+++|++|++++|+....      .....+.+.....++.++.+|++|.++++++++
T Consensus         3 ~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~   82 (274)
T 3e03_A            3 TLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAVA   82 (274)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHH
Confidence            48899999999999999999999999999999999987531      112222233335678999999999999888875


Q ss_pred             -------CCCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHHh----cCCCEEEEEeccceecc--CCCCC
Q 025755           77 -------GCTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCVK----AKVKRVVVVSSIGAVML--NPNWP  139 (248)
Q Consensus        77 -------~id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~~----~~~~~iV~vSS~~~~~~--~~~~~  139 (248)
                             ++|++|||||.......    .+.++..+++|+.++.++++++.+    .+.++||++||..+..+  .+.  
T Consensus        83 ~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~--  160 (274)
T 3e03_A           83 ATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAWWGA--  160 (274)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCCCCHHHHHH--
T ss_pred             HHHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHhcCCCCCCC--
Confidence                   68999999998654321    234567899999999999888765    35689999999776554  221  


Q ss_pred             CCCccCCCCCCchhhhccccchHHHHHHH----HHHHHHHHHHhCCccEEEEccC-eeecCCCCCCCC------ccHHHH
Q 025755          140 KGQVMDEECWSDEEFCKATENYYCLAKTI----AEIQALEYAKRGELDIVTVCPS-IVIGPMLQPTIN------TSSLLL  208 (248)
Q Consensus       140 ~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~----~e~l~~~~~~~~~i~v~~vrpg-~i~g~~~~~~~~------~~~~~~  208 (248)
                                         ...|+.||++    ++.++.+++++ |++||+|+|| .+.+++......      ..+..+
T Consensus       161 -------------------~~~Y~asKaal~~l~~~la~e~~~~-gI~vn~v~PG~~v~T~~~~~~~~~~~~~~~~pedv  220 (274)
T 3e03_A          161 -------------------HTGYTLAKMGMSLVTLGLAAEFGPQ-GVAINALWPRTVIATDAINMLPGVDAAACRRPEIM  220 (274)
T ss_dssp             -------------------CHHHHHHHHHHHHHHHHHHHHHGGG-TCEEEEEECSBCBCC-------CCCGGGSBCTHHH
T ss_pred             -------------------CchHHHHHHHHHHHHHHHHHHhhhc-CEEEEEEECCcccccchhhhcccccccccCCHHHH
Confidence                               2349999974    45555555544 5999999999 577776422110      112222


Q ss_pred             HHHHcCCCCCCCCCchhhhhhhhhcccee
Q 025755          209 LGFLKGFFFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       209 ~~~~~~~~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                      .....  ++.++...|+||+++ +|||..
T Consensus       221 A~~v~--~l~s~~~~~itG~~i-~~~g~~  246 (274)
T 3e03_A          221 ADAAH--AVLTREAAGFHGQFL-IDDEVL  246 (274)
T ss_dssp             HHHHH--HHHTSCCTTCCSCEE-EHHHHH
T ss_pred             HHHHH--HHhCccccccCCeEE-EcCcch
Confidence            22222  677888999999999 777643

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=99.97  E-value=3.7e-31  Score=224.19  Aligned_cols=182  Identities=24%  Similarity=0.220  Sum_probs=142.8

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCc-----hhhHHhhhhcC-CCCCeEEEEccCCCHHHHHHHhC--C
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCD-----EKNAHLKKLEG-ASENLQLFKTDLLDYEALCAATA--G   77 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~-----~~~~~~~~~~~-~~~~~~~~~~Di~d~~~~~~~~~--~   77 (248)
                      +|+|+||||+||||++++++|+++|++|++++|+...     ......+.+.. ...++.++.+|++|.+++.++++  +
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   81 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKYS   81 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHhcC
Confidence            4799999999999999999999999999999986432     01111111111 13468899999999999999998  8


Q ss_pred             CCEEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhcc
Q 025755           78 CTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKA  157 (248)
Q Consensus        78 id~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~  157 (248)
                      +|+|||+||..........+..++++|+.++.++++++++.+.++|||+||.. +++...   ..+++|+++..+     
T Consensus        82 ~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~-~~g~~~---~~~~~E~~~~~p-----  152 (348)
T 1ek6_A           82 FMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSAT-VYGNPQ---YLPLDEAHPTGG-----  152 (348)
T ss_dssp             EEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGG-GGCSCS---SSSBCTTSCCCC-----
T ss_pred             CCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHhCCCEEEEECcHH-HhCCCC---CCCcCCCCCCCC-----
Confidence            99999999975432112344678999999999999999998889999999965 454432   567788776543     


Q ss_pred             ccchHHHHHHHHHHHHHHHHHh-CCccEEEEccCeeecCC
Q 025755          158 TENYYCLAKTIAEIQALEYAKR-GELDIVTVCPSIVIGPM  196 (248)
Q Consensus       158 ~~~~Y~~sK~~~e~l~~~~~~~-~~i~v~~vrpg~i~g~~  196 (248)
                      ..+.|+.+|..+|.+++.++.+ .+++++++||+++|||.
T Consensus       153 ~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~  192 (348)
T 1ek6_A          153 CTNPYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAH  192 (348)
T ss_dssp             CSSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCC
T ss_pred             CCCchHHHHHHHHHHHHHHHhcCCCcceEEEeeccccCCC
Confidence            1456999999999999999876 23999999999999995

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=99.97  E-value=2e-31  Score=218.54  Aligned_cols=213  Identities=14%  Similarity=0.020  Sum_probs=152.7

Q ss_pred             CCCCCCcEEEEEcC--ccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC--
Q 025755            1 MSGEDKERVCVTGA--GGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA--   76 (248)
Q Consensus         1 m~~l~~k~vlVtG~--~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~--   76 (248)
                      |..+++|+++||||  +||||+++++.|+++|++|++++|+..+......+.+   ..++.++.+|++|.++++++++  
T Consensus         2 m~~l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~   78 (269)
T 2h7i_A            2 TGLLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRL---PAKAPLLELDVQNEEHLASLAGRV   78 (269)
T ss_dssp             CCTTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTS---SSCCCEEECCTTCHHHHHHHHHHH
T ss_pred             ccccCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhc---CCCceEEEccCCCHHHHHHHHHHH
Confidence            34588999999999  9999999999999999999999998632212222222   3467889999999999888876  


Q ss_pred             --------CCCEEEEccccCCC-----C----CCCCccccchhhhHHHHHHHHHHHHhc--CCCEEEEEeccceeccCCC
Q 025755           77 --------GCTGVFHVACPVPV-----G----KVPNPEVQLIDPAVVGTKNVLNSCVKA--KVKRVVVVSSIGAVMLNPN  137 (248)
Q Consensus        77 --------~id~vi~~ag~~~~-----~----~~~~~~~~~~~~n~~g~~~~~~~~~~~--~~~~iV~vSS~~~~~~~~~  137 (248)
                              ++|+||||||....     .    ...+.|...+++|+.++.++++++.+.  ..++||++||... ++.+.
T Consensus        79 ~~~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~iss~~~-~~~~~  157 (269)
T 2h7i_A           79 TEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPS-RAMPA  157 (269)
T ss_dssp             HHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCS-SCCTT
T ss_pred             HHHhCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEcCccc-cccCc
Confidence                    79999999997651     1    112345678999999999999999875  2369999999653 33322


Q ss_pred             CCCCCccCCCCCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCC-----CCcc-----
Q 025755          138 WPKGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPT-----INTS-----  204 (248)
Q Consensus       138 ~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~-----~~~~-----  204 (248)
                                           ...|+.||+..+.+.+.++.+   .+++||+|+||.+.+++....     ....     
T Consensus       158 ---------------------~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  216 (269)
T 2h7i_A          158 ---------------------YNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQ  216 (269)
T ss_dssp             ---------------------THHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHH
T ss_pred             ---------------------hHHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccchhhhccccccchhhHHHHHH
Confidence                                 234999997655555554433   369999999999999853210     0000     


Q ss_pred             ---HHHHHHHHcC-C------------CCCCCCCchhhhhhhhhccceeE
Q 025755          205 ---SLLLLGFLKG-F------------FFTTPSHSYMLERTLVLNQGVRL  238 (248)
Q Consensus       205 ---~~~~~~~~~~-~------------~l~~~~~~~~~g~~l~vd~g~~~  238 (248)
                         ..+......+ +            |+.++.+.|+||+++.||||+.+
T Consensus       217 ~~~~~~~~~~p~~rr~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~~  266 (269)
T 2h7i_A          217 LLEEGWDQRAPIGWNMKDATPVAKTVCALLSDWLPATTGDIIYADGGAHT  266 (269)
T ss_dssp             HHHHHHHHHCTTCCCTTCCHHHHHHHHHHHSSSCTTCCSEEEEESTTGGG
T ss_pred             HHHHhhhccCCcccCCCCHHHHHHHHHHHhCchhccCcceEEEecCCeee
Confidence               0011111112 1            67788889999999999999764

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.97  E-value=3.2e-31  Score=224.72  Aligned_cols=208  Identities=18%  Similarity=0.203  Sum_probs=159.5

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHC-CC-eEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEE
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLK-GY-MVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGV   81 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~-g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~v   81 (248)
                      +++|+||||||+|+||++++++|+++ |+ +|++++|+... .......+.  ..++.++.+|++|.+++.++++++|+|
T Consensus        19 ~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~-~~~~~~~~~--~~~v~~~~~Dl~d~~~l~~~~~~~D~V   95 (344)
T 2gn4_A           19 LDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELK-QSEMAMEFN--DPRMRFFIGDVRDLERLNYALEGVDIC   95 (344)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHH-HHHHHHHHC--CTTEEEEECCTTCHHHHHHHTTTCSEE
T ss_pred             hCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhh-HHHHHHHhc--CCCEEEEECCCCCHHHHHHHHhcCCEE
Confidence            67899999999999999999999999 97 99999997532 111112222  257999999999999999999999999


Q ss_pred             EEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccccch
Q 025755           82 FHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENY  161 (248)
Q Consensus        82 i~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~  161 (248)
                      ||+||..........+.+.+++|+.|+.++++++.+.++++||++||..++.+                        .+.
T Consensus        96 ih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~v~~~V~~SS~~~~~p------------------------~~~  151 (344)
T 2gn4_A           96 IHAAALKHVPIAEYNPLECIKTNIMGASNVINACLKNAISQVIALSTDKAANP------------------------INL  151 (344)
T ss_dssp             EECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGSSC------------------------CSH
T ss_pred             EECCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCCccCCC------------------------ccH
Confidence            99999754321123346789999999999999999999999999999654322                        234


Q ss_pred             HHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCCCccHHHHHHHHcCC-CCCCCCCchhhhhhhhhcccee
Q 025755          162 YCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKGF-FFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       162 Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                      |+.||+++|.++..++.+   .+++++++|||++|||...    ..+.++..+..+. .+... ++..+...+++++...
T Consensus       152 Y~~sK~~~E~~~~~~~~~~~~~g~~~~~vRpg~v~g~~~~----~i~~~~~~~~~g~~~~~i~-~~~~~r~~i~v~D~a~  226 (344)
T 2gn4_A          152 YGATKLCSDKLFVSANNFKGSSQTQFSVVRYGNVVGSRGS----VVPFFKKLVQNKASEIPIT-DIRMTRFWITLDEGVS  226 (344)
T ss_dssp             HHHHHHHHHHHHHHGGGCCCSSCCEEEEECCCEETTCTTS----HHHHHHHHHHHTCCCEEES-CTTCEEEEECHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCCcEEEEEEeccEECCCCC----HHHHHHHHHHcCCCceEEe-CCCeEEeeEEHHHHHH
Confidence            999999999999998864   4699999999999998742    5566667777776 43332 2333445677777666


Q ss_pred             EEEeec
Q 025755          238 LYRCKI  243 (248)
Q Consensus       238 ~~~~~~  243 (248)
                      ++..++
T Consensus       227 ~v~~~l  232 (344)
T 2gn4_A          227 FVLKSL  232 (344)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            554443

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=99.97  E-value=2.9e-31  Score=214.71  Aligned_cols=209  Identities=18%  Similarity=0.095  Sum_probs=150.8

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcC-CCCCeEEEEccCCCHHHHHHHhC-----
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEG-ASENLQLFKTDLLDYEALCAATA-----   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Di~d~~~~~~~~~-----   76 (248)
                      ++++|+++||||+||||++++++|+++|++|++++|+.... ....+.+.. ...++.++.+|++|.++++++++     
T Consensus         4 ~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   82 (248)
T 2pnf_A            4 KLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERA-KAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNL   82 (248)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHH-HHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHH-HHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHh
Confidence            47889999999999999999999999999999999976322 222222211 13578999999999999998886     


Q ss_pred             --CCCEEEEccccCCCCC----CCCccccchhhhHHHHHHHHHHHH----hcCCCEEEEEeccceeccCCCCCCCCccCC
Q 025755           77 --GCTGVFHVACPVPVGK----VPNPEVQLIDPAVVGTKNVLNSCV----KAKVKRVVVVSSIGAVMLNPNWPKGQVMDE  146 (248)
Q Consensus        77 --~id~vi~~ag~~~~~~----~~~~~~~~~~~n~~g~~~~~~~~~----~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e  146 (248)
                        ++|+||||||......    ..+.+...+++|+.++.++++++.    +.+.++||++||..++++.+..        
T Consensus        83 ~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~--------  154 (248)
T 2pnf_A           83 VDGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGNVGQ--------  154 (248)
T ss_dssp             SSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCEEEEEECCHHHHHCCTTC--------
T ss_pred             cCCCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhcCCCCCC--------
Confidence              7999999999765331    123456789999999977766654    4567899999998766655432        


Q ss_pred             CCCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCCCccHHHHHHHHc----CC----
Q 025755          147 ECWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLK----GF----  215 (248)
Q Consensus       147 ~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~----~~----  215 (248)
                                   ..|+.||+..+.+.+.++.+   .++++++++||.+++|+.....   .........    +.    
T Consensus       155 -------------~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~---~~~~~~~~~~~~~~~~~~~  218 (248)
T 2pnf_A          155 -------------VNYSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAVLS---EEIKQKYKEQIPLGRFGSP  218 (248)
T ss_dssp             -------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSC---HHHHHHHHHTCTTSSCBCH
T ss_pred             -------------chHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeceecCchhhhcc---HHHHHHHHhcCCCCCccCH
Confidence                         33999998776666665543   2699999999999998754211   111111111    11    


Q ss_pred             --------CCCCCCCchhhhhhhhhccce
Q 025755          216 --------FFTTPSHSYMLERTLVLNQGV  236 (248)
Q Consensus       216 --------~l~~~~~~~~~g~~l~vd~g~  236 (248)
                              ++..+...+++|+++.+|||.
T Consensus       219 ~dva~~~~~l~~~~~~~~~G~~~~v~gg~  247 (248)
T 2pnf_A          219 EEVANVVLFLCSELASYITGEVIHVNGGM  247 (248)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             HHHHHHHHHHhCchhhcCCCcEEEeCCCc
Confidence                    344444578899999999985

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=99.97  E-value=7.5e-31  Score=221.73  Aligned_cols=230  Identities=17%  Similarity=0.137  Sum_probs=167.6

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCC--CCEE
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAG--CTGV   81 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~--id~v   81 (248)
                      |++|+|+||||+||||++++++|+++|++|++++|+........++.+. ...++.++.+|++|.+++.+++++  +|+|
T Consensus         1 m~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~v   79 (345)
T 2z1m_A            1 MSGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLKELG-IENDVKIIHMDLLEFSNIIRTIEKVQPDEV   79 (345)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTTHHHHHTT-CTTTEEECCCCTTCHHHHHHHHHHHCCSEE
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccccccHhhcc-ccCceeEEECCCCCHHHHHHHHHhcCCCEE
Confidence            3578999999999999999999999999999999987533222222221 134789999999999999999885  6999


Q ss_pred             EEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCC-CEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccccc
Q 025755           82 FHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKV-KRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATEN  160 (248)
Q Consensus        82 i~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~-~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~  160 (248)
                      |||||..........+..++++|+.++.++++++.+.+. ++|||+||.. +|+...   ..+++|+.+..+      .+
T Consensus        80 ih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~-vyg~~~---~~~~~e~~~~~~------~~  149 (345)
T 2z1m_A           80 YNLAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTVKPDTKFYQASTSE-MFGKVQ---EIPQTEKTPFYP------RS  149 (345)
T ss_dssp             EECCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTCEEEEEEEGG-GGCSCS---SSSBCTTSCCCC------CS
T ss_pred             EECCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEechh-hcCCCC---CCCCCccCCCCC------CC
Confidence            999997643222345678899999999999999998876 8999999976 455432   456677765443      45


Q ss_pred             hHHHHHHHHHHHHHHHHHhCCccEEEEccCeeecCCCCCCC--CccHHHHHHHHcCCCCC-CCCCchhhhhhhhhcccee
Q 025755          161 YYCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTI--NTSSLLLLGFLKGFFFT-TPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       161 ~Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~--~~~~~~~~~~~~~~~l~-~~~~~~~~g~~l~vd~g~~  237 (248)
                      .|+.||..+|.+++.++.++++++.++||.++|||......  .....++.++..+.... ...+.....+.+++++...
T Consensus       150 ~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gpg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~  229 (345)
T 2z1m_A          150 PYAVAKLFGHWITVNYREAYNMFACSGILFNHESPLRGIEFVTRKITYSLARIKYGLQDKLVLGNLNAKRDWGYAPEYVE  229 (345)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEECCEEHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHhCCceEeeeeeeecCCCCCCcchhHHHHHHHHHHHcCCCCeeeeCCCCceeeeEEHHHHHH
Confidence            69999999999999999887799999999999999765331  11223344445554221 2223333345678887766


Q ss_pred             EEEeecc
Q 025755          238 LYRCKIQ  244 (248)
Q Consensus       238 ~~~~~~~  244 (248)
                      ++..++.
T Consensus       230 a~~~~~~  236 (345)
T 2z1m_A          230 AMWLMMQ  236 (345)
T ss_dssp             HHHHHHT
T ss_pred             HHHHHHh
Confidence            6655544

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=99.97  E-value=9.9e-31  Score=212.02  Aligned_cols=212  Identities=15%  Similarity=0.115  Sum_probs=152.8

Q ss_pred             CCCCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC----
Q 025755            1 MSGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA----   76 (248)
Q Consensus         1 m~~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~----   76 (248)
                      |.++++|+++||||+||||+++++.|+++|++|++++|+... .....+.+.. ..++.++.+|++|.++++++++    
T Consensus         1 ~~~~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~   78 (251)
T 1zk4_A            1 SNRLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDV-GEKAAKSVGT-PDQIQFFQHDSSDEDGWTKLFDATEK   78 (251)
T ss_dssp             CCTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHH-HHHHHHHHCC-TTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHHhhc-cCceEEEECCCCCHHHHHHHHHHHHH
Confidence            456889999999999999999999999999999999998632 2222222322 2578999999999999888876    


Q ss_pred             ---CCCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHH----hcCC-CEEEEEeccceeccCCCCCCCCcc
Q 025755           77 ---GCTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCV----KAKV-KRVVVVSSIGAVMLNPNWPKGQVM  144 (248)
Q Consensus        77 ---~id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~----~~~~-~~iV~vSS~~~~~~~~~~~~~~~~  144 (248)
                         ++|+||||||.......    .+.+...+++|+.++.++.+.+.    +.+. ++||++||..++.+.+.       
T Consensus        79 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~-------  151 (251)
T 1zk4_A           79 AFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPS-------  151 (251)
T ss_dssp             HHSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTT-------
T ss_pred             HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhccCCCC-------
Confidence               48999999997654322    23346789999998877666654    4455 79999999876655432       


Q ss_pred             CCCCCCchhhhccccchHHHHHHHHHHHHHHHHH-----hCCccEEEEccCeeecCCCCCCCCc----------------
Q 025755          145 DEECWSDEEFCKATENYYCLAKTIAEIQALEYAK-----RGELDIVTVCPSIVIGPMLQPTINT----------------  203 (248)
Q Consensus       145 ~e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~-----~~~i~v~~vrpg~i~g~~~~~~~~~----------------  203 (248)
                                    ...|+.||+..+.+++.++.     ..++++++++||+++||+.......                
T Consensus       152 --------------~~~Y~~sK~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~  217 (251)
T 1zk4_A          152 --------------LGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGAEEAMSQRTKTPMGHIG  217 (251)
T ss_dssp             --------------CHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTTHHHHHTSTTTCTTSSCB
T ss_pred             --------------CccchHHHHHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhhcCchhhhHHHhhcCCCCCCc
Confidence                          23499999877777766654     3479999999999999864321100                


Q ss_pred             cHHHHHHHHcCCCCCCCCCchhhhhhhhhcccee
Q 025755          204 SSLLLLGFLKGFFFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       204 ~~~~~~~~~~~~~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                      .+.-+.....  ++..+...+++|+++.+|||+.
T Consensus       218 ~~~dva~~~~--~l~~~~~~~~~G~~~~v~gG~~  249 (251)
T 1zk4_A          218 EPNDIAYICV--YLASNESKFATGSEFVVDGGYT  249 (251)
T ss_dssp             CHHHHHHHHH--HHHSGGGTTCCSCEEEESTTGG
T ss_pred             CHHHHHHHHH--HHcCcccccccCcEEEECCCcc
Confidence            0011111100  4455556789999999999975

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=99.97  E-value=7.9e-31  Score=212.97  Aligned_cols=211  Identities=18%  Similarity=0.169  Sum_probs=151.7

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCe-EEEEccCCCHHHHHHHh------
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENL-QLFKTDLLDYEALCAAT------   75 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~Di~d~~~~~~~~------   75 (248)
                      ++++|+++||||+||||++++++|+++|++|++++|+.++. ....+.+   ..++ .++.+|++|.+++++++      
T Consensus         8 ~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~-~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~   83 (254)
T 2wsb_A            8 RLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAAL-DRAAQEL---GAAVAARIVADVTDAEAMTAAAAEAEAV   83 (254)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHHH---GGGEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHHh---cccceeEEEEecCCHHHHHHHHHHHHhh
Confidence            46789999999999999999999999999999999986422 2222222   2356 88999999999988876      


Q ss_pred             CCCCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHH----hcCCCEEEEEeccceeccCCCCCCCCccCCC
Q 025755           76 AGCTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCV----KAKVKRVVVVSSIGAVMLNPNWPKGQVMDEE  147 (248)
Q Consensus        76 ~~id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~----~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~  147 (248)
                      .++|+||||||.......    .+.+...+++|+.++.++++++.    +.+.++||++||..++.+.+..         
T Consensus        84 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~---------  154 (254)
T 2wsb_A           84 APVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIVNRPQ---------  154 (254)
T ss_dssp             SCCCEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSS---------
T ss_pred             CCCcEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEecchhccCCCCC---------
Confidence            478999999997654322    12346788999999877777654    4467899999997765543321         


Q ss_pred             CCCchhhhccccchHHHHHHHHHHHHHHHHHhC---CccEEEEccCeeecCCCCCCCCccHHHHHHHHc----CC-----
Q 025755          148 CWSDEEFCKATENYYCLAKTIAEIQALEYAKRG---ELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLK----GF-----  215 (248)
Q Consensus       148 ~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~---~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~----~~-----  215 (248)
                                +...|+.||++.+.+++.++.+.   ++++++++||+++|++..... ..+.....+..    ++     
T Consensus       155 ----------~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  223 (254)
T 2wsb_A          155 ----------FASSYMASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTLKMR-ERPELFETWLDMTPMGRCGEPS  223 (254)
T ss_dssp             ----------CBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHHHH-TCHHHHHHHHHTSTTSSCBCHH
T ss_pred             ----------cchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecccCchhhhccc-cChHHHHHHHhcCCCCCCCCHH
Confidence                      12449999998887777776553   699999999999998643110 00111222111    11     


Q ss_pred             -------CCCCCCCchhhhhhhhhcccee
Q 025755          216 -------FFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       216 -------~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                             ++..+...+++|+++.+|||..
T Consensus       224 dva~~~~~l~~~~~~~~~G~~~~v~gG~~  252 (254)
T 2wsb_A          224 EIAAAALFLASPAASYVTGAILAVDGGYT  252 (254)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHHHHhCcccccccCCEEEECCCEe
Confidence                   4445556789999999999964

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=99.97  E-value=5.6e-31  Score=226.95  Aligned_cols=185  Identities=22%  Similarity=0.228  Sum_probs=143.7

Q ss_pred             CcEEEEEcCccHHHHHHHHHHH-HCCCeEEEEEcCCCch--------hhHH---hhhhcCC--CCC---eEEEEccCCCH
Q 025755            6 KERVCVTGAGGYIASWLVKYLL-LKGYMVHGTVRDPCDE--------KNAH---LKKLEGA--SEN---LQLFKTDLLDY   68 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~-~~g~~V~~~~r~~~~~--------~~~~---~~~~~~~--~~~---~~~~~~Di~d~   68 (248)
                      +|+||||||+||||++++++|+ ++|++|++++|+....        ....   ++.+...  ..+   +.++.+|++|.
T Consensus         2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~   81 (397)
T 1gy8_A            2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (397)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCH
Confidence            4699999999999999999999 9999999999875431        1111   1112111  124   88999999999


Q ss_pred             HHHHHHhC--C-CCEEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCC----CCC
Q 025755           69 EALCAATA--G-CTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNW----PKG  141 (248)
Q Consensus        69 ~~~~~~~~--~-id~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~----~~~  141 (248)
                      +++.++++  + +|+||||||..........+..++++|+.++.++++++++.+.++|||+||.. +++....    ...
T Consensus        82 ~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~iv~~SS~~-v~g~~~~~~~~~~~  160 (397)
T 1gy8_A           82 DFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAA-IFGNPTMGSVSTNA  160 (397)
T ss_dssp             HHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGG-GTBSCCC-----CC
T ss_pred             HHHHHHHHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHhCCCEEEEECCHH-HhCCCCcccccccc
Confidence            99999987  6 99999999976432112345678999999999999999999889999999965 4544320    013


Q ss_pred             CccCCCCCCchhhhccccchHHHHHHHHHHHHHHHHHhCCccEEEEccCeeecCCC
Q 025755          142 QVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPML  197 (248)
Q Consensus       142 ~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~  197 (248)
                      .+++|+++..      +.+.|+.||.++|.++..++.+++++++++||+++|||..
T Consensus       161 ~~~~E~~~~~------p~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilRp~~v~G~~~  210 (397)
T 1gy8_A          161 EPIDINAKKS------PESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHE  210 (397)
T ss_dssp             CCBCTTSCCB------CSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCT
T ss_pred             cCcCccCCCC------CCCchHHHHHHHHHHHHHHHHHHCCcEEEEeccceeCCCc
Confidence            4667776643      3566999999999999999987789999999999999974

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=99.97  E-value=2.9e-30  Score=207.47  Aligned_cols=209  Identities=13%  Similarity=0.054  Sum_probs=159.2

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhc-CCCCCeEEEEccCCCHHHHHHHhC-------
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLE-GASENLQLFKTDLLDYEALCAATA-------   76 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~Di~d~~~~~~~~~-------   76 (248)
                      +||+++||||+||||++++++|+++|++|++++|+.+.. ....+.+. ....++.++.+|++|.++++++++       
T Consensus         1 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   79 (235)
T 3l77_A            1 EMKVAVITGASRGIGEAIARALARDGYALALGARSVDRL-EKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFG   79 (235)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcC
Confidence            478999999999999999999999999999999986432 22222222 224679999999999999999887       


Q ss_pred             CCCEEEEccccCCCCC----CCCccccchhhhHHHHHHHHHHHHhc---CCCEEEEEeccceeccCCCCCCCCccCCCCC
Q 025755           77 GCTGVFHVACPVPVGK----VPNPEVQLIDPAVVGTKNVLNSCVKA---KVKRVVVVSSIGAVMLNPNWPKGQVMDEECW  149 (248)
Q Consensus        77 ~id~vi~~ag~~~~~~----~~~~~~~~~~~n~~g~~~~~~~~~~~---~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~  149 (248)
                      ++|+||||||......    ..+.+...+++|+.++.++++++.+.   +.+++|++||..+..+.+..           
T Consensus        80 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~-----------  148 (235)
T 3l77_A           80 DVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRTGGLALVTTSDVSARLIPYG-----------  148 (235)
T ss_dssp             SCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSCCTTC-----------
T ss_pred             CCCEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEecchhcccCCCc-----------
Confidence            6899999999865443    23445678999999999999998763   45789999887766654432           


Q ss_pred             CchhhhccccchHHHHHHHHHHHHHHHHHh-CCccEEEEccCeeecCCCCCCCC-------ccHHHHHHHHcCCCCCCCC
Q 025755          150 SDEEFCKATENYYCLAKTIAEIQALEYAKR-GELDIVTVCPSIVIGPMLQPTIN-------TSSLLLLGFLKGFFFTTPS  221 (248)
Q Consensus       150 ~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~-~~i~v~~vrpg~i~g~~~~~~~~-------~~~~~~~~~~~~~~l~~~~  221 (248)
                                ..|+.||++.+.+.+.+..+ .++++++|+||.+.+++......       ..+..+.....  ++..+.
T Consensus       149 ----------~~Y~~sKaa~~~~~~~l~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~p~dva~~v~--~l~~~~  216 (235)
T 3l77_A          149 ----------GGYVSTKWAARALVRTFQIENPDVRFFELRPGAVDTYFGGSKPGKPKEKGYLKPDEIAEAVR--CLLKLP  216 (235)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHHCTTSEEEEEEECSBSSSTTTCCSCCCGGGTCBCHHHHHHHHH--HHHTSC
T ss_pred             ----------chHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCccccccccccCCcccccCCCCHHHHHHHHH--HHHcCC
Confidence                      23999999988888887543 37999999999999987654311       12222222222  677778


Q ss_pred             Cchhhhhhhhhcccee
Q 025755          222 HSYMLERTLVLNQGVR  237 (248)
Q Consensus       222 ~~~~~g~~l~vd~g~~  237 (248)
                      ..+++|+++.+|+|..
T Consensus       217 ~~~~~~~~~~~~~~~~  232 (235)
T 3l77_A          217 KDVRVEELMLRSVYQR  232 (235)
T ss_dssp             TTCCCCEEEECCTTSC
T ss_pred             CCCccceEEEeecccC
Confidence            8899999999999864

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=99.97  E-value=1.3e-31  Score=217.89  Aligned_cols=208  Identities=15%  Similarity=0.113  Sum_probs=149.5

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC------
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA------   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~------   76 (248)
                      ++++|+++||||+||||++++++|+++|++|++++|+... .....+.+   ..++.++++|++|.++++++++      
T Consensus         3 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~   78 (253)
T 1hxh_A            3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAA-GQQLAAEL---GERSMFVRHDVSSEADWTLVMAAVQRRL   78 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHH-HHHHHHHH---CTTEEEECCCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHHc---CCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            5789999999999999999999999999999999997632 22222222   3578899999999999888775      


Q ss_pred             -CCCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHH----hcCCCEEEEEeccceeccCCCCCCCCccCCC
Q 025755           77 -GCTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCV----KAKVKRVVVVSSIGAVMLNPNWPKGQVMDEE  147 (248)
Q Consensus        77 -~id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~----~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~  147 (248)
                       ++|+||||||.......    .+.+...+++|+.++.++.+++.    +.+ ++||++||..++.+.+.          
T Consensus        79 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~----------  147 (253)
T 1hxh_A           79 GTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-GSIINMASVSSWLPIEQ----------  147 (253)
T ss_dssp             CSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-EEEEEECCGGGTSCCTT----------
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC-CEEEEEcchhhcCCCCC----------
Confidence             47999999997653321    23456789999998876666554    446 89999999876655432          


Q ss_pred             CCCchhhhccccchHHHHHHHHHHHHHHHH----HhC-CccEEEEccCeeecCCCCC--CCCccHH--------------
Q 025755          148 CWSDEEFCKATENYYCLAKTIAEIQALEYA----KRG-ELDIVTVCPSIVIGPMLQP--TINTSSL--------------  206 (248)
Q Consensus       148 ~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~----~~~-~i~v~~vrpg~i~g~~~~~--~~~~~~~--------------  206 (248)
                                 ...|+.||+..+.+.+.++    +++ ++++++|+||+++||+...  .......              
T Consensus       148 -----------~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~  216 (253)
T 1hxh_A          148 -----------YAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRA  216 (253)
T ss_dssp             -----------BHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCCHHHHBCBTTTBTTCCE
T ss_pred             -----------CccHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEEeCCccCchhhhccchhhhHHHHhhhhccCccCCC
Confidence                       2349999976655555544    441 6999999999999986321  0011111              


Q ss_pred             ----HHHHHHcCCCCCCCCCchhhhhhhhhccceeE
Q 025755          207 ----LLLGFLKGFFFTTPSHSYMLERTLVLNQGVRL  238 (248)
Q Consensus       207 ----~~~~~~~~~~l~~~~~~~~~g~~l~vd~g~~~  238 (248)
                          -+.....  ++.++...|++|+++.+|||+..
T Consensus       217 ~~~~dvA~~~~--~l~s~~~~~~tG~~~~vdgG~~~  250 (253)
T 1hxh_A          217 YMPERIAQLVL--FLASDESSVMSGSELHADNSILG  250 (253)
T ss_dssp             ECHHHHHHHHH--HHHSGGGTTCCSCEEEESSSCTT
T ss_pred             CCHHHHHHHHH--HHcCccccCCCCcEEEECCCccc
Confidence                1111110  56666678999999999999753

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.97  E-value=4.3e-30  Score=207.76  Aligned_cols=213  Identities=15%  Similarity=0.054  Sum_probs=148.1

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCC--CeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-----
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKG--YMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-----   76 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-----   76 (248)
                      |++|+++||||+||||+++++.|+++|  ++|++++|+....  ..+...  ...++.++.+|++|.++++++++     
T Consensus         1 m~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~--~~l~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~   76 (250)
T 1yo6_A            1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKA--TELKSI--KDSRVHVLPLTVTCDKSLDTFVSKVGEI   76 (250)
T ss_dssp             CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGC--HHHHTC--CCTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHH--HHHHhc--cCCceEEEEeecCCHHHHHHHHHHHHHh
Confidence            457899999999999999999999999  9999999986432  222222  24679999999999999988876     


Q ss_pred             ----CCCEEEEccccCC-CCC----CCCccccchhhhHHHHHHHHHHHHhc----------C-----CCEEEEEecccee
Q 025755           77 ----GCTGVFHVACPVP-VGK----VPNPEVQLIDPAVVGTKNVLNSCVKA----------K-----VKRVVVVSSIGAV  132 (248)
Q Consensus        77 ----~id~vi~~ag~~~-~~~----~~~~~~~~~~~n~~g~~~~~~~~~~~----------~-----~~~iV~vSS~~~~  132 (248)
                          ++|+||||||... ...    ..+.+...+++|+.++.++++++.+.          +     .++||++||..++
T Consensus        77 ~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~  156 (250)
T 1yo6_A           77 VGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGS  156 (250)
T ss_dssp             HGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGC
T ss_pred             cCCCCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCccc
Confidence                8999999999865 221    12334678999999999998887653          4     6899999998765


Q ss_pred             ccCCCCCCCCccCCCCCCchhhhccccchHHHHHHHHHHHHHHHHHhC---CccEEEEccCeeecCCCCCCCCccHHHHH
Q 025755          133 MLNPNWPKGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKRG---ELDIVTVCPSIVIGPMLQPTINTSSLLLL  209 (248)
Q Consensus       133 ~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~---~i~v~~vrpg~i~g~~~~~~~~~~~~~~~  209 (248)
                      .+.+..        +.+      ..+...|+.||++.+.+++.++.++   ++++++|+||++.+++........+....
T Consensus       157 ~~~~~~--------~~~------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~a  222 (250)
T 1yo6_A          157 ITDNTS--------GSA------QFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGKNAALTVEQST  222 (250)
T ss_dssp             STTCCS--------TTS------SSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC-------------HHHH
T ss_pred             cCCccc--------ccc------cCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCCCCCCCCCCHHHHH
Confidence            543210        000      0123459999998888888777654   69999999999999876532111112111


Q ss_pred             HHHcCCCCCCCCCchhhhhhhhhccce
Q 025755          210 GFLKGFFFTTPSHSYMLERTLVLNQGV  236 (248)
Q Consensus       210 ~~~~~~~l~~~~~~~~~g~~l~vd~g~  236 (248)
                      +...  ++......+++|+.+.+||+.
T Consensus       223 ~~~~--~~~~~~~~~~~G~~~~~~g~~  247 (250)
T 1yo6_A          223 AELI--SSFNKLDNSHNGRFFMRNLKP  247 (250)
T ss_dssp             HHHH--HHHTTCCGGGTTCEEETTEEE
T ss_pred             HHHH--HHHhcccccCCCeEEEECCcC
Confidence            1111  233344567899999999985

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=99.97  E-value=7.5e-32  Score=215.20  Aligned_cols=195  Identities=16%  Similarity=0.118  Sum_probs=145.3

Q ss_pred             CCCCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC---C
Q 025755            1 MSGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA---G   77 (248)
Q Consensus         1 m~~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~---~   77 (248)
                      |+.+++|+++||||+||||++++++|+++|++|++++|+..                     +|++|.++++++++   +
T Consensus         1 M~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~---------------------~D~~~~~~v~~~~~~~g~   59 (223)
T 3uce_A            1 MMGSDKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG---------------------LDISDEKSVYHYFETIGA   59 (223)
T ss_dssp             ----CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT---------------------CCTTCHHHHHHHHHHHCS
T ss_pred             CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc---------------------cCCCCHHHHHHHHHHhCC
Confidence            67789999999999999999999999999999999998752                     89999999998876   6


Q ss_pred             CCEEEEccccCCC-CC----CCCccccchhhhHHHHHHHHHHHHhc--CCCEEEEEeccceeccCCCCCCCCccCCCCCC
Q 025755           78 CTGVFHVACPVPV-GK----VPNPEVQLIDPAVVGTKNVLNSCVKA--KVKRVVVVSSIGAVMLNPNWPKGQVMDEECWS  150 (248)
Q Consensus        78 id~vi~~ag~~~~-~~----~~~~~~~~~~~n~~g~~~~~~~~~~~--~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~  150 (248)
                      +|++|||||.... ..    ..+.+...+++|+.++.++++++.+.  +.++||++||..+..+.+..            
T Consensus        60 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~------------  127 (223)
T 3uce_A           60 FDHLIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLSRKVVANT------------  127 (223)
T ss_dssp             EEEEEECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGGTSCCTTC------------
T ss_pred             CCEEEECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchhhccCCCCc------------
Confidence            8999999997632 21    12345678999999999999999876  34699999998776655432            


Q ss_pred             chhhhccccchHHHHHHHHHHHHHHHHHhCC-ccEEEEccCeeecCCCCCCCCcc-HHHHHHH----HcCC---------
Q 025755          151 DEEFCKATENYYCLAKTIAEIQALEYAKRGE-LDIVTVCPSIVIGPMLQPTINTS-SLLLLGF----LKGF---------  215 (248)
Q Consensus       151 ~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~~-i~v~~vrpg~i~g~~~~~~~~~~-~~~~~~~----~~~~---------  215 (248)
                               ..|+.||++.+.+.+.++.+++ +|||+|+||.+.+|+........ ..+....    ..++         
T Consensus       128 ---------~~Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~  198 (223)
T 3uce_A          128 ---------YVKAAINAAIEATTKVLAKELAPIRVNAISPGLTKTEAYKGMNADDRDAMYQRTQSHLPVGKVGEASDIAM  198 (223)
T ss_dssp             ---------HHHHHHHHHHHHHHHHHHHHHTTSEEEEEEECSBCSGGGTTSCHHHHHHHHHHHHHHSTTCSCBCHHHHHH
T ss_pred             ---------hHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcchhhhhcchhhHHHHHHHHhhcCCCCCccCHHHHHH
Confidence                     3399999988888877776643 99999999999999765432111 1111111    1111         


Q ss_pred             -CCCCCCCchhhhhhhhhcccee
Q 025755          216 -FFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       216 -~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                       .+.+..+.|++|+++.+|||..
T Consensus       199 ~~~~l~~~~~~tG~~i~vdgG~~  221 (223)
T 3uce_A          199 AYLFAIQNSYMTGTVIDVDGGAL  221 (223)
T ss_dssp             HHHHHHHCTTCCSCEEEESTTGG
T ss_pred             HHHHHccCCCCCCcEEEecCCee
Confidence             1112236899999999999975

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=99.97  E-value=5.9e-30  Score=211.54  Aligned_cols=211  Identities=17%  Similarity=0.117  Sum_probs=154.0

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCch------hhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDE------KNAHLKKLEGASENLQLFKTDLLDYEALCAATA   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~------~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~   76 (248)
                      ++++|+++||||++|||++++++|+++|++|++++|+..+.      .....+.+.....++.++++|++|.++++++++
T Consensus         6 ~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~   85 (285)
T 3sc4_A            6 SLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAVA   85 (285)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHH
Confidence            37899999999999999999999999999999999987531      122233333335679999999999999888876


Q ss_pred             -------CCCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHHhc----CCCEEEEEeccceeccC-CCCCC
Q 025755           77 -------GCTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCVKA----KVKRVVVVSSIGAVMLN-PNWPK  140 (248)
Q Consensus        77 -------~id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~~~----~~~~iV~vSS~~~~~~~-~~~~~  140 (248)
                             ++|++|||||.......    .+.|+..+++|+.++.++++++.+.    +.++||++||..+..+. +.   
T Consensus        86 ~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~---  162 (285)
T 3sc4_A           86 KTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPKWLR---  162 (285)
T ss_dssp             HHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCCSGGGSC---
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhccCCCCC---
Confidence                   78999999998754422    2345678899999999999998765    56899999997765543 22   


Q ss_pred             CCccCCCCCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccC-eeecCCCCC-------C-CCccHHHH
Q 025755          141 GQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPS-IVIGPMLQP-------T-INTSSLLL  208 (248)
Q Consensus       141 ~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg-~i~g~~~~~-------~-~~~~~~~~  208 (248)
                                        ...|+.||++.+.+.+.++.+   .||+||+|+|| .+.+++...       . ....+..+
T Consensus       163 ------------------~~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~t~~~~~~~~~~~~~~r~~~pedv  224 (285)
T 3sc4_A          163 ------------------PTPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVATAAVQNLLGGDEAMARSRKPEVY  224 (285)
T ss_dssp             ------------------SHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBCCHHHHHHHTSCCCCTTCBCTHHH
T ss_pred             ------------------CchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCccccHHHHhhccccccccCCCCHHHH
Confidence                              234999998666666665544   36999999999 566653210       0 00112222


Q ss_pred             HHHHcCCCCCCCCCchhhhhhhhhcccee
Q 025755          209 LGFLKGFFFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       209 ~~~~~~~~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                      .....  ++.++.. +++|+.+.+|||..
T Consensus       225 A~~~~--~l~s~~~-~~tG~~i~~dgg~~  250 (285)
T 3sc4_A          225 ADAAY--VVLNKPS-SYTGNTLLCEDVLL  250 (285)
T ss_dssp             HHHHH--HHHTSCT-TCCSCEEEHHHHHH
T ss_pred             HHHHH--HHhCCcc-cccceEEEEcCchh
Confidence            22221  5666666 99999999999865

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=99.97  E-value=1.3e-30  Score=216.88  Aligned_cols=212  Identities=14%  Similarity=0.045  Sum_probs=151.6

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCC-CCCeEEEEccCCCHHHHHHHhC-----
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGA-SENLQLFKTDLLDYEALCAATA-----   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Di~d~~~~~~~~~-----   76 (248)
                      ++++|+++||||+||||+++++.|+++|++|++++|+.... ....+.+... ..++.++.+|++|.++++++++     
T Consensus        23 ~l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~-~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~  101 (302)
T 1w6u_A           23 SFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVL-KATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKV  101 (302)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHH
Confidence            36789999999999999999999999999999999986422 2222222221 3578999999999999888876     


Q ss_pred             --CCCEEEEccccCCCCC----CCCccccchhhhHHHHHHHHHHHHhc-----CCCEEEEEeccceeccCCCCCCCCccC
Q 025755           77 --GCTGVFHVACPVPVGK----VPNPEVQLIDPAVVGTKNVLNSCVKA-----KVKRVVVVSSIGAVMLNPNWPKGQVMD  145 (248)
Q Consensus        77 --~id~vi~~ag~~~~~~----~~~~~~~~~~~n~~g~~~~~~~~~~~-----~~~~iV~vSS~~~~~~~~~~~~~~~~~  145 (248)
                        ++|+||||||......    ..+.+...+++|+.++.++++++.+.     +.++||++||..+..+.+.        
T Consensus       102 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~--------  173 (302)
T 1w6u_A          102 AGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGF--------  173 (302)
T ss_dssp             TCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTT--------
T ss_pred             cCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccCCCC--------
Confidence              4699999999754321    12345678999999999998887542     4579999999876655432        


Q ss_pred             CCCCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCC-CCCCCccHHHHHHHHcC----C--
Q 025755          146 EECWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPML-QPTINTSSLLLLGFLKG----F--  215 (248)
Q Consensus       146 e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~-~~~~~~~~~~~~~~~~~----~--  215 (248)
                                   ...|+.||++.+.+++.++.+   .++++++++||.++++.. ....... .....+..+    +  
T Consensus       174 -------------~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~-~~~~~~~~~~p~~~~~  239 (302)
T 1w6u_A          174 -------------VVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTG-TFEKEMIGRIPCGRLG  239 (302)
T ss_dssp             -------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTS-HHHHHHHTTCTTSSCB
T ss_pred             -------------cchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhhhcccch-hhHHHHHhcCCcCCCC
Confidence                         234999999888888777765   579999999999999832 2111110 011111111    1  


Q ss_pred             ----------CCCCCCCchhhhhhhhhcccee
Q 025755          216 ----------FFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       216 ----------~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                                ++..+...+++|+++.+|||..
T Consensus       240 ~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~  271 (302)
T 1w6u_A          240 TVEELANLAAFLCSDYASWINGAVIKFDGGEE  271 (302)
T ss_dssp             CHHHHHHHHHHHTSGGGTTCCSCEEEESTTHH
T ss_pred             CHHHHHHHHHHHcCCcccccCCCEEEECCCee
Confidence                      4555556788999999999964

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=99.97  E-value=2.1e-30  Score=219.41  Aligned_cols=229  Identities=18%  Similarity=0.256  Sum_probs=164.6

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEE
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVF   82 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi   82 (248)
                      .+++|+||||||+|+||++++++|+++|++|++++|+..... ....... ...++.++.+|+.|.     .+.++|+||
T Consensus        24 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~-~~~~~~~~~~D~~~~-----~~~~~d~vi   96 (343)
T 2b69_A           24 EKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRK-RNVEHWI-GHENFELINHDVVEP-----LYIEVDQIY   96 (343)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCG-GGTGGGT-TCTTEEEEECCTTSC-----CCCCCSEEE
T ss_pred             ccCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccch-hhhhhhc-cCCceEEEeCccCCh-----hhcCCCEEE
Confidence            467899999999999999999999999999999999753221 1111111 135789999999875     357899999


Q ss_pred             EccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccccchH
Q 025755           83 HVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYY  162 (248)
Q Consensus        83 ~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y  162 (248)
                      |+||..........+...+++|+.++.++++++.+.+. ++||+||.. +++...   ..+++|+.+...+ +..+.+.|
T Consensus        97 h~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~-v~g~~~---~~~~~E~~~~~~~-~~~~~~~Y  170 (343)
T 2b69_A           97 HLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA-RLLLASTSE-VYGDPE---VHPQSEDYWGHVN-PIGPRACY  170 (343)
T ss_dssp             ECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTC-EEEEEEEGG-GGBSCS---SSSBCTTCCCBCC-SSSTTHHH
T ss_pred             ECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCC-cEEEECcHH-HhCCCC---CCCCcccccccCC-CCCCCCch
Confidence            99997653222344567899999999999999999885 999999965 454432   4566776432211 12345669


Q ss_pred             HHHHHHHHHHHHHHHHhCCccEEEEccCeeecCCCCCC-CCccHHHHHHHHcCCCCCCCCCchhhhhhhhhccceeEEEe
Q 025755          163 CLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPT-INTSSLLLLGFLKGFFFTTPSHSYMLERTLVLNQGVRLYRC  241 (248)
Q Consensus       163 ~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~g~~l~vd~g~~~~~~  241 (248)
                      +.+|..+|.++..++.+++++++++||+++|||..... ......++..+..+..+....++....+.+++|+...++..
T Consensus       171 ~~sK~~~E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~  250 (343)
T 2b69_A          171 DEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVA  250 (343)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCCcEEEEEEcceeCcCCCCCcccHHHHHHHHHHcCCCceEcCCCCeEEeeEeHHHHHHHHHH
Confidence            99999999999999877789999999999999976543 23445667777777654433333334456788887766555


Q ss_pred             ecc
Q 025755          242 KIQ  244 (248)
Q Consensus       242 ~~~  244 (248)
                      ++.
T Consensus       251 ~~~  253 (343)
T 2b69_A          251 LMN  253 (343)
T ss_dssp             HHT
T ss_pred             HHh
Confidence            444

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=99.97  E-value=2e-30  Score=211.81  Aligned_cols=211  Identities=18%  Similarity=0.094  Sum_probs=148.9

Q ss_pred             CCCCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC----
Q 025755            1 MSGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA----   76 (248)
Q Consensus         1 m~~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~----   76 (248)
                      |+++++|++|||||+||||++++++|+++|++|++++|+... .....+.+.....++.++.+|++|.++++++++    
T Consensus        24 m~~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~  102 (262)
T 3rkr_A           24 MSSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEK-LRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLA  102 (262)
T ss_dssp             -CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHH-HHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             hhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHH-HHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHH
Confidence            556889999999999999999999999999999999998643 223333344445678999999999999888775    


Q ss_pred             ---CCCEEEEccccCCCC-----CCCCccccchhhhHHHHHHHHHHHHh----cCCCEEEEEeccceeccCCCCCCCCcc
Q 025755           77 ---GCTGVFHVACPVPVG-----KVPNPEVQLIDPAVVGTKNVLNSCVK----AKVKRVVVVSSIGAVMLNPNWPKGQVM  144 (248)
Q Consensus        77 ---~id~vi~~ag~~~~~-----~~~~~~~~~~~~n~~g~~~~~~~~~~----~~~~~iV~vSS~~~~~~~~~~~~~~~~  144 (248)
                         ++|+||||||.....     ...+.+...+++|+.++.++++++.+    .+.++||++||..+..+.+..      
T Consensus       103 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~------  176 (262)
T 3rkr_A          103 AHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKNPVADG------  176 (262)
T ss_dssp             HHSCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCSSCCCTTC------
T ss_pred             hcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCCCC------
Confidence               589999999973221     11234567899999999988888754    467899999998876655432      


Q ss_pred             CCCCCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCCC-------ccHHHHHHHHcC
Q 025755          145 DEECWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTIN-------TSSLLLLGFLKG  214 (248)
Q Consensus       145 ~e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~~-------~~~~~~~~~~~~  214 (248)
                                     ..|+.||++.+.+++.++.+   .++++++|+||.+.+++......       ..+..+..... 
T Consensus       177 ---------------~~Y~asKaa~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~p~dvA~~v~-  240 (262)
T 3rkr_A          177 ---------------AAYTASKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFGVGLSAKKSALGAIEPDDIADVVA-  240 (262)
T ss_dssp             ---------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------------CCCHHHHHHHHH-
T ss_pred             ---------------chHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCCcCCcccccccccccccCCCHHHHHHHHH-
Confidence                           33999998666666655543   36999999999999987543211       11122222221 


Q ss_pred             CCCCCCCCchhhhhhhhhccc
Q 025755          215 FFFTTPSHSYMLERTLVLNQG  235 (248)
Q Consensus       215 ~~l~~~~~~~~~g~~l~vd~g  235 (248)
                       ++.++...+++|+++..+.+
T Consensus       241 -~l~s~~~~~~~g~~~i~p~~  260 (262)
T 3rkr_A          241 -LLATQADQSFISEVLVRPTL  260 (262)
T ss_dssp             -HHHTCCTTCCEEEEEEECCC
T ss_pred             -HHhcCccccccCcEEecccc
Confidence             66677777888887766654

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=99.97  E-value=4.7e-31  Score=213.80  Aligned_cols=199  Identities=19%  Similarity=0.151  Sum_probs=142.9

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC------
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA------   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~------   76 (248)
                      .+++|+++||||+||||++++++|+++|++|++++|+.....            .+..+.+|++|.++++++++      
T Consensus        12 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~------------~~~~~~~D~~~~~~~~~~~~~~~~~~   79 (247)
T 1uzm_A           12 PFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPK------------GLFGVEVDVTDSDAVDRAFTAVEEHQ   79 (247)
T ss_dssp             CCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT------------TSEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHH------------HhcCeeccCCCHHHHHHHHHHHHHHc
Confidence            477899999999999999999999999999999999864211            12248899999999888775      


Q ss_pred             -CCCEEEEccccCCCCC----CCCccccchhhhHHHHHHHHHHHHh----cCCCEEEEEeccceeccCCCCCCCCccCCC
Q 025755           77 -GCTGVFHVACPVPVGK----VPNPEVQLIDPAVVGTKNVLNSCVK----AKVKRVVVVSSIGAVMLNPNWPKGQVMDEE  147 (248)
Q Consensus        77 -~id~vi~~ag~~~~~~----~~~~~~~~~~~n~~g~~~~~~~~~~----~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~  147 (248)
                       ++|+||||||......    ..+.++..+++|+.++.++++++.+    .+.++||++||..++++.+..         
T Consensus        80 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~---------  150 (247)
T 1uzm_A           80 GPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQ---------  150 (247)
T ss_dssp             SSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----CC---------
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhccCCCCC---------
Confidence             5899999999765321    1244577899999999998888764    466899999998776655432         


Q ss_pred             CCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCCCccHHHHHHHHc----CC-----
Q 025755          148 CWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLK----GF-----  215 (248)
Q Consensus       148 ~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~----~~-----  215 (248)
                                  ..|+.||+..+.+.+.++.+   .++++++|+||.+.+++....   ..........    ++     
T Consensus       151 ------------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~---~~~~~~~~~~~~p~~~~~~~~  215 (247)
T 1uzm_A          151 ------------ANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRAL---DERIQQGALQFIPAKRVGTPA  215 (247)
T ss_dssp             ------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHS---CHHHHHHHGGGCTTCSCBCHH
T ss_pred             ------------hhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCCcccchhhc---CHHHHHHHHhcCCCCCCcCHH
Confidence                        23999998555554444432   359999999999998863211   0111111110    11     


Q ss_pred             -------CCCCCCCchhhhhhhhhcccee
Q 025755          216 -------FFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       216 -------~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                             ++.++...|++|+++.+|||..
T Consensus       216 dvA~~~~~l~s~~~~~~~G~~i~vdgG~~  244 (247)
T 1uzm_A          216 EVAGVVSFLASEDASYISGAVIPVDGGMG  244 (247)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred             HHHHHHHHHcCccccCCcCCEEEECCCcc
Confidence                   5566667899999999999965

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=99.97  E-value=5.2e-31  Score=215.25  Aligned_cols=216  Identities=15%  Similarity=0.119  Sum_probs=154.2

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcC-CCCCeEEEEccCCCHHHHHHHhC------
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEG-ASENLQLFKTDLLDYEALCAATA------   76 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Di~d~~~~~~~~~------   76 (248)
                      +++|+++||||+||||++++++|+++|++|++++|+..+... ..+.+.. ...++.++.+|++|.++++++++      
T Consensus        12 ~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~-~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   90 (265)
T 1h5q_A           12 FVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVE-VTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADL   90 (265)
T ss_dssp             CTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHH-HHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHH-HHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHhc
Confidence            678999999999999999999999999999999997643322 2222211 13578999999999999888775      


Q ss_pred             -CCCEEEEccccCCCCC----CCCccccchhhhHHHHHHHHHHHHhc----C-CCEEEEEeccceeccCCCCCCCCccCC
Q 025755           77 -GCTGVFHVACPVPVGK----VPNPEVQLIDPAVVGTKNVLNSCVKA----K-VKRVVVVSSIGAVMLNPNWPKGQVMDE  146 (248)
Q Consensus        77 -~id~vi~~ag~~~~~~----~~~~~~~~~~~n~~g~~~~~~~~~~~----~-~~~iV~vSS~~~~~~~~~~~~~~~~~e  146 (248)
                       .+|+||||||......    ..+.+...+++|+.++.++++++.+.    + .++||++||..++.+.+..        
T Consensus        91 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~--------  162 (265)
T 1h5q_A           91 GPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSS--------  162 (265)
T ss_dssp             CSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEE--------
T ss_pred             CCCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhcccccc--------
Confidence             4899999999765432    12345678999999999999988654    3 4799999997765443210        


Q ss_pred             CCCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCCCccHHHHHHHHc----CC----
Q 025755          147 ECWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLK----GF----  215 (248)
Q Consensus       147 ~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~----~~----  215 (248)
                      .      ....+...|+.||++.+.+++.++.+   .++++++++||++++++....   ..........    ++    
T Consensus       163 ~------~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~---~~~~~~~~~~~~~~~~~~~~  233 (265)
T 1h5q_A          163 L------NGSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHM---DKKIRDHQASNIPLNRFAQP  233 (265)
T ss_dssp             T------TEECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGS---CHHHHHHHHHTCTTSSCBCG
T ss_pred             c------cccccccccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccccccccc---chhHHHHHHhcCcccCCCCH
Confidence            0      00112345999998777777766654   269999999999999975432   1111111111    11    


Q ss_pred             --------CCCCCCCchhhhhhhhhcccee
Q 025755          216 --------FFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       216 --------~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                              ++..+...+++|+.+.+|||..
T Consensus       234 ~dva~~~~~l~~~~~~~~~G~~~~v~gG~~  263 (265)
T 1h5q_A          234 EEMTGQAILLLSDHATYMTGGEYFIDGGQL  263 (265)
T ss_dssp             GGGHHHHHHHHSGGGTTCCSCEEEECTTGG
T ss_pred             HHHHHHHHhhccCchhcCcCcEEEecCCEe
Confidence                    4445556789999999999975

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=99.97  E-value=1.9e-31  Score=223.23  Aligned_cols=221  Identities=19%  Similarity=0.154  Sum_probs=163.3

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCch--hhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCE
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDE--KNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTG   80 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~   80 (248)
                      .+++|+|+||||+|+||+++++.|+++|++|++++|+....  ......... ...++.++.+|+.          ++|+
T Consensus         4 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~----------~~d~   72 (321)
T 3vps_A            4 NTLKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFL-EKPVLELEERDLS----------DVRL   72 (321)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSEEE-CSCGGGCCHHHHT----------TEEE
T ss_pred             ccCCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhhhc-cCCCeeEEeCccc----------cCCE
Confidence            36689999999999999999999999999999999976410  111111111 1234555566665          7899


Q ss_pred             EEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccccc
Q 025755           81 VFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATEN  160 (248)
Q Consensus        81 vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~  160 (248)
                      |||+|+..........+...++ |+.++.++++++++.++++|||+||.. +|+...   ..+++|+++..+      .+
T Consensus        73 vi~~a~~~~~~~~~~~~~~~~~-n~~~~~~ll~a~~~~~v~~~v~~SS~~-v~~~~~---~~~~~E~~~~~p------~~  141 (321)
T 3vps_A           73 VYHLASHKSVPRSFKQPLDYLD-NVDSGRHLLALCTSVGVPKVVVGSTCE-VYGQAD---TLPTPEDSPLSP------RS  141 (321)
T ss_dssp             EEECCCCCCHHHHTTSTTTTHH-HHHHHHHHHHHHHHHTCCEEEEEEEGG-GGCSCS---SSSBCTTSCCCC------CS
T ss_pred             EEECCccCChHHHHhCHHHHHH-HHHHHHHHHHHHHHcCCCeEEEecCHH-HhCCCC---CCCCCCCCCCCC------CC
Confidence            9999997654322344466777 999999999999999999999999966 454432   567788776554      45


Q ss_pred             hHHHHHHHHHHHHHHHHHhCCc-cEEEEccCeeecCCCCCCCCccHHHHHHHHcCCCCCCCCCchhhhhhhhhccceeEE
Q 025755          161 YYCLAKTIAEIQALEYAKRGEL-DIVTVCPSIVIGPMLQPTINTSSLLLLGFLKGFFFTTPSHSYMLERTLVLNQGVRLY  239 (248)
Q Consensus       161 ~Y~~sK~~~e~l~~~~~~~~~i-~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~l~vd~g~~~~  239 (248)
                      .|+.+|..+|.++..++.++++ +++++||+++|||..... .....++..+..+..+....++....+.+++|+...++
T Consensus       142 ~Y~~sK~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~  220 (321)
T 3vps_A          142 PYAASKVGLEMVAGAHQRASVAPEVGIVRFFNVYGPGERPD-ALVPRLCANLLTRNELPVEGDGEQRRDFTYITDVVDKL  220 (321)
T ss_dssp             HHHHHHHHHHHHHHHHHHSSSSCEEEEEEECEEECTTCCTT-SHHHHHHHHHHHHSEEEEETTSCCEECEEEHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHcCCCceEEEEeccccCcCCCCC-ChHHHHHHHHHcCCCeEEeCCCCceEceEEHHHHHHHH
Confidence            6999999999999999998889 999999999999987652 35567777777776555445454555678888887766


Q ss_pred             EeeccCC
Q 025755          240 RCKIQIP  246 (248)
Q Consensus       240 ~~~~~~p  246 (248)
                      ..++..+
T Consensus       221 ~~~~~~~  227 (321)
T 3vps_A          221 VALANRP  227 (321)
T ss_dssp             HHGGGSC
T ss_pred             HHHHhcC
Confidence            6665543

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=99.97  E-value=7.5e-31  Score=211.88  Aligned_cols=207  Identities=18%  Similarity=0.166  Sum_probs=150.0

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCCeEEEE-EcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-------C
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGYMVHGT-VRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-------G   77 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-------~   77 (248)
                      +|+++||||+||||++++++|+++|++|+++ .|+... .....+.+.....++.++.+|++|.++++++++       +
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   79 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKA-AEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGT   79 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHH-HHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHH-HHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            5899999999999999999999999999995 666432 222222232224578899999999999988876       6


Q ss_pred             CCEEEEccccCCCCC----CCCccccchhhhHHHHHHHHHHHHhc----CCCEEEEEeccceeccCCCCCCCCccCCCCC
Q 025755           78 CTGVFHVACPVPVGK----VPNPEVQLIDPAVVGTKNVLNSCVKA----KVKRVVVVSSIGAVMLNPNWPKGQVMDEECW  149 (248)
Q Consensus        78 id~vi~~ag~~~~~~----~~~~~~~~~~~n~~g~~~~~~~~~~~----~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~  149 (248)
                      +|+||||||......    ..+.+...+++|+.++.++++++.+.    +.++||++||..++++.+..           
T Consensus        80 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~-----------  148 (244)
T 1edo_A           80 IDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQ-----------  148 (244)
T ss_dssp             CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTC-----------
T ss_pred             CCEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhcCCCCCC-----------
Confidence            899999999765431    12345678999999999998888653    67899999998776665432           


Q ss_pred             CchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCCCccHHHHHHHHcC----C-------
Q 025755          150 SDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKG----F-------  215 (248)
Q Consensus       150 ~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~~----~-------  215 (248)
                                ..|+.||...+.+.+.++.+   .++++++++||+++|++....   ...........    +       
T Consensus       149 ----------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~---~~~~~~~~~~~~~~~~~~~~~dv  215 (244)
T 1edo_A          149 ----------ANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKL---GEDMEKKILGTIPLGRTGQPENV  215 (244)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTT---CHHHHHHHHTSCTTCSCBCHHHH
T ss_pred             ----------ccchhhHHHHHHHHHHHHHHhhhcCCEEEEEeeCccccchhhhc---ChHHHHHHhhcCCCCCCCCHHHH
Confidence                      33999998666666555543   369999999999999864321   11111111111    0       


Q ss_pred             -----CCC-CCCCchhhhhhhhhcccee
Q 025755          216 -----FFT-TPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       216 -----~l~-~~~~~~~~g~~l~vd~g~~  237 (248)
                           ++. .+...+++|+++.+|||+.
T Consensus       216 a~~~~~l~~~~~~~~~~G~~~~v~gG~~  243 (244)
T 1edo_A          216 AGLVEFLALSPAASYITGQAFTIDGGIA  243 (244)
T ss_dssp             HHHHHHHHHCSGGGGCCSCEEEESTTTT
T ss_pred             HHHHHHHhCCCccCCcCCCEEEeCCCcc
Confidence                 333 4556789999999999964

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=99.97  E-value=4.6e-30  Score=216.27  Aligned_cols=214  Identities=19%  Similarity=0.142  Sum_probs=158.0

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC--CCCEE
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA--GCTGV   81 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~--~id~v   81 (248)
                      +++|+||||||+||||++++++|+++|++|++++|+..... ...+.    ..++.++.+|++|.+++.++++  ++|+|
T Consensus        18 ~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~----l~~v~~~~~Dl~d~~~~~~~~~~~~~D~v   92 (330)
T 2pzm_A           18 GSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKR-EVLPP----VAGLSVIEGSVTDAGLLERAFDSFKPTHV   92 (330)
T ss_dssp             TTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCG-GGSCS----CTTEEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccch-hhhhc----cCCceEEEeeCCCHHHHHHHHhhcCCCEE
Confidence            67899999999999999999999999999999999754221 11111    1578899999999999999998  99999


Q ss_pred             EEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccccch
Q 025755           82 FHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENY  161 (248)
Q Consensus        82 i~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~  161 (248)
                      |||||..... .... .. +++|+.++.++++++.+.+.++|||+||..+ ++..... ..+++|++        .+.+.
T Consensus        93 ih~A~~~~~~-~~~~-~~-~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~-~~~~~~~-~~~~~E~~--------~~~~~  159 (330)
T 2pzm_A           93 VHSAAAYKDP-DDWA-ED-AATNVQGSINVAKAASKAGVKRLLNFQTALC-YGRPATV-PIPIDSPT--------APFTS  159 (330)
T ss_dssp             EECCCCCSCT-TCHH-HH-HHHHTHHHHHHHHHHHHHTCSEEEEEEEGGG-GCSCSSS-SBCTTCCC--------CCCSH
T ss_pred             EECCccCCCc-cccC-hh-HHHHHHHHHHHHHHHHHcCCCEEEEecCHHH-hCCCccC-CCCcCCCC--------CCCCh
Confidence            9999976543 2222 33 8999999999999999988899999999764 4432100 11566665        23456


Q ss_pred             HHHHHHHHHHHHHHHHHhCCccEEEEccCeeecCCCCCCCCccHHHHHHHHcCCCCCCCCCchhhhhhhhhcccee-EEE
Q 025755          162 YCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKGFFFTTPSHSYMLERTLVLNQGVR-LYR  240 (248)
Q Consensus       162 Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~l~vd~g~~-~~~  240 (248)
                      |+.+|..+|.+++.+    ++++.++||+++|||...  ......++..+..+.  ....++. ..+.+++++... ++.
T Consensus       160 Y~~sK~~~e~~~~~~----~~~~~~iR~~~v~gp~~~--~~~~~~~~~~~~~~~--~~~~~~~-~~~~i~~~Dva~~a~~  230 (330)
T 2pzm_A          160 YGISKTAGEAFLMMS----DVPVVSLRLANVTGPRLA--IGPIPTFYKRLKAGQ--KCFCSDT-VRDFLDMSDFLAIADL  230 (330)
T ss_dssp             HHHHHHHHHHHHHTC----SSCEEEEEECEEECTTCC--SSHHHHHHHHHHTTC--CCCEESC-EECEEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHc----CCCEEEEeeeeeECcCCC--CCHHHHHHHHHHcCC--EEeCCCC-EecceeHHHHHHHHHH
Confidence            999999999988876    599999999999999852  134455566666554  2222222 455677777666 554


Q ss_pred             eecc
Q 025755          241 CKIQ  244 (248)
Q Consensus       241 ~~~~  244 (248)
                      .++.
T Consensus       231 ~~~~  234 (330)
T 2pzm_A          231 SLQE  234 (330)
T ss_dssp             HTST
T ss_pred             HHhh
Confidence            4443

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=99.97  E-value=1.7e-30  Score=211.17  Aligned_cols=174  Identities=13%  Similarity=0.061  Sum_probs=128.3

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC------
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA------   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~------   76 (248)
                      ++++|+++||||+||||+++++.|+++|++|++++|+.+. .....+.+.....++.++.+|++|.++++++++      
T Consensus         4 ~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~g   82 (252)
T 3h7a_A            4 TPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEK-LAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAHA   82 (252)
T ss_dssp             -CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGG-GHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhhC
Confidence            4789999999999999999999999999999999998753 333334444445689999999999999998886      


Q ss_pred             CCCEEEEccccCCCCC----CCCccccchhhhHHHHHHHHHHHHh----cCCCEEEEEeccceeccCCCCCCCCccCCCC
Q 025755           77 GCTGVFHVACPVPVGK----VPNPEVQLIDPAVVGTKNVLNSCVK----AKVKRVVVVSSIGAVMLNPNWPKGQVMDEEC  148 (248)
Q Consensus        77 ~id~vi~~ag~~~~~~----~~~~~~~~~~~n~~g~~~~~~~~~~----~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~  148 (248)
                      ++|+||||||......    ..+.+...+++|+.|+.++++++.+    .+.++||++||..+..+.+..          
T Consensus        83 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~----------  152 (252)
T 3h7a_A           83 PLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATASLRGGSGF----------  152 (252)
T ss_dssp             CEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTCCCTTC----------
T ss_pred             CceEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHHcCCCCCC----------
Confidence            6799999999865432    1244567899999999888887754    466899999998877665443          


Q ss_pred             CCchhhhccccchHHHHHHHHHHH----HHHHHHhCCccE-EEEccCeeecCCCCC
Q 025755          149 WSDEEFCKATENYYCLAKTIAEIQ----ALEYAKRGELDI-VTVCPSIVIGPMLQP  199 (248)
Q Consensus       149 ~~~~~~~~~~~~~Y~~sK~~~e~l----~~~~~~~~~i~v-~~vrpg~i~g~~~~~  199 (248)
                                 ..|+.||++.+.+    +.+++++ |++| |+|+||.+.+++...
T Consensus       153 -----------~~Y~asKaa~~~l~~~la~e~~~~-gi~v~n~v~PG~v~T~~~~~  196 (252)
T 3h7a_A          153 -----------AAFASAKFGLRAVAQSMARELMPK-NIHVAHLIIDSGVDTAWVRE  196 (252)
T ss_dssp             -----------HHHHHHHHHHHHHHHHHHHHHGGG-TEEEEEEEEC----------
T ss_pred             -----------ccHHHHHHHHHHHHHHHHHHhhhc-CCEEEEEecCCccCChhhhc
Confidence                       3399999755554    4555444 5999 999999999987653

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=99.97  E-value=7.1e-31  Score=211.67  Aligned_cols=201  Identities=17%  Similarity=0.151  Sum_probs=146.1

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-------CC
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-------GC   78 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-------~i   78 (248)
                      +|+++||||+||||++++++|+++|++|++++|+.++    ..+.+     .+.++.+|++| ++++++++       ++
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~----~~~~~-----~~~~~~~D~~~-~~~~~~~~~~~~~~g~i   71 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEE----AAQSL-----GAVPLPTDLEK-DDPKGLVKRALEALGGL   71 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHH----HHHHH-----TCEEEECCTTT-SCHHHHHHHHHHHHTSC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH----HHHhh-----CcEEEecCCch-HHHHHHHHHHHHHcCCC
Confidence            6899999999999999999999999999999998642    11222     27788999999 77666553       79


Q ss_pred             CEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHHh----cCCCEEEEEeccceeccC--CCCCCCCccCCCC
Q 025755           79 TGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCVK----AKVKRVVVVSSIGAVMLN--PNWPKGQVMDEEC  148 (248)
Q Consensus        79 d~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~~----~~~~~iV~vSS~~~~~~~--~~~~~~~~~~e~~  148 (248)
                      |+||||||.......    .+.|+..+++|+.++.++++++.+    .+.++||++||..++.+.  +.           
T Consensus        72 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~-----------  140 (239)
T 2ekp_A           72 HVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAGGPVP-----------  140 (239)
T ss_dssp             CEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTSC-----------
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhccCCCCCC-----------
Confidence            999999997653321    234567899999999888888753    467899999998765543  11           


Q ss_pred             CCchhhhccccchHHHHHHHHHHHHHHHHHhC---CccEEEEccCeeecCCCCCCCCccHHHHHHHHc----CC------
Q 025755          149 WSDEEFCKATENYYCLAKTIAEIQALEYAKRG---ELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLK----GF------  215 (248)
Q Consensus       149 ~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~---~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~----~~------  215 (248)
                                ...|+.||+..+.+.+.++.+.   |+++++|+||++++++..... ..+.....+..    ++      
T Consensus       141 ----------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~-~~~~~~~~~~~~~p~~~~~~~~d  209 (239)
T 2ekp_A          141 ----------IPAYTTAKTALLGLTRALAKEWARLGIRVNLLCPGYVETEFTLPLR-QNPELYEPITARIPMGRWARPEE  209 (239)
T ss_dssp             ----------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHH-TCHHHHHHHHTTCTTSSCBCHHH
T ss_pred             ----------CccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCccCchhhccc-cCHHHHHHHHhcCCCCCCcCHHH
Confidence                      2349999986666666555432   699999999999998743110 01111111111    11      


Q ss_pred             ------CCCCCCCchhhhhhhhhccceeE
Q 025755          216 ------FFTTPSHSYMLERTLVLNQGVRL  238 (248)
Q Consensus       216 ------~l~~~~~~~~~g~~l~vd~g~~~  238 (248)
                            ++.++...|++|+.+.+|||+.+
T Consensus       210 vA~~~~~l~s~~~~~~tG~~~~vdgG~~~  238 (239)
T 2ekp_A          210 IARVAAVLCGDEAEYLTGQAVAVDGGFLA  238 (239)
T ss_dssp             HHHHHHHHTSGGGTTCCSCEEEESTTTTT
T ss_pred             HHHHHHHHcCchhcCCCCCEEEECCCccc
Confidence                  56666678999999999999753

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=99.97  E-value=5.2e-30  Score=211.35  Aligned_cols=170  Identities=19%  Similarity=0.160  Sum_probs=133.3

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-------
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-------   76 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-------   76 (248)
                      +++|+++||||+||||++++++|+++|++|++++|+..... .....   ...++.++.+|++|.++++++++       
T Consensus         3 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~-~~~~~---~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g   78 (281)
T 3m1a_A            3 ESAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALD-DLVAA---YPDRAEAISLDVTDGERIDVVAADVLARYG   78 (281)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGH-HHHHH---CTTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHh---ccCCceEEEeeCCCHHHHHHHHHHHHHhCC
Confidence            78899999999999999999999999999999999874322 22222   24579999999999999988876       


Q ss_pred             CCCEEEEccccCCCCCC----CCccccchhhhHHHH----HHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCC
Q 025755           77 GCTGVFHVACPVPVGKV----PNPEVQLIDPAVVGT----KNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEEC  148 (248)
Q Consensus        77 ~id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~----~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~  148 (248)
                      ++|+||||||.......    .+.+...+++|+.|+    +.+++.+++.+.++||++||..+..+.+.           
T Consensus        79 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~-----------  147 (281)
T 3m1a_A           79 RVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGGQLSFAG-----------  147 (281)
T ss_dssp             CCSEEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTT-----------
T ss_pred             CCCEEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCccccCCCCC-----------
Confidence            68999999997654321    234567899999995    55555556667789999999887665433           


Q ss_pred             CCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCC
Q 025755          149 WSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQ  198 (248)
Q Consensus       149 ~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~  198 (248)
                                ..+|+.||++.+.+++.++.+   .|+++++|+||+++||+..
T Consensus       148 ----------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  190 (281)
T 3m1a_A          148 ----------FSAYSATKAALEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFG  190 (281)
T ss_dssp             ----------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC
T ss_pred             ----------chHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccccccc
Confidence                      234999998877777777665   4699999999999998754

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.97  E-value=1.2e-30  Score=223.36  Aligned_cols=228  Identities=18%  Similarity=0.099  Sum_probs=165.8

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcC-----CCCCeEEEEccCCCHHHHHHHhCC--CC
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEG-----ASENLQLFKTDLLDYEALCAATAG--CT   79 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~~Di~d~~~~~~~~~~--id   79 (248)
                      |+||||||+||||++++++|+++|++|++++|+........++.+..     ...++.++.+|++|.+++.+++++  +|
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d  104 (375)
T 1t2a_A           25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKPT  104 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhcCCC
Confidence            79999999999999999999999999999999764311111111111     135688999999999999999885  69


Q ss_pred             EEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCC---CEEEEEeccceeccCCCCCCCCccCCCCCCchhhhc
Q 025755           80 GVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKV---KRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCK  156 (248)
Q Consensus        80 ~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~---~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~  156 (248)
                      +||||||..........+...+++|+.++.++++++.+.+.   ++|||+||... ++...   ..+++|+++..+    
T Consensus       105 ~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~~~~iv~~SS~~~-~~~~~---~~~~~E~~~~~~----  176 (375)
T 1t2a_A          105 EIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSEL-YGKVQ---EIPQKETTPFYP----  176 (375)
T ss_dssp             EEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGG-TCSCS---SSSBCTTSCCCC----
T ss_pred             EEEECCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhCCCccceEEEecchhh-hCCCC---CCCCCccCCCCC----
Confidence            99999997543211234467899999999999999999876   89999999764 44322   456777766543    


Q ss_pred             cccchHHHHHHHHHHHHHHHHHhCCccEEEEccCeeecCCCCCCC--CccHHHHHHHHcCCCC-CCCCCchhhhhhhhhc
Q 025755          157 ATENYYCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTI--NTSSLLLLGFLKGFFF-TTPSHSYMLERTLVLN  233 (248)
Q Consensus       157 ~~~~~Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~--~~~~~~~~~~~~~~~l-~~~~~~~~~g~~l~vd  233 (248)
                        .+.|+.+|..+|.+++.++.+++++++++||+.+|||......  .....++..+..+... ....++....+.+++|
T Consensus       177 --~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~  254 (375)
T 1t2a_A          177 --RSPYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAK  254 (375)
T ss_dssp             --CSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEEHH
T ss_pred             --CChhHHHHHHHHHHHHHHHHHhCCCEEEEecccccCCCCCCCcchHHHHHHHHHHHcCCCceeEeCCCCceeeeEEHH
Confidence              4569999999999999999887899999999999999764321  1123445555556432 2223333445678888


Q ss_pred             cceeEEEeecc
Q 025755          234 QGVRLYRCKIQ  244 (248)
Q Consensus       234 ~g~~~~~~~~~  244 (248)
                      +...++..+++
T Consensus       255 Dva~a~~~~~~  265 (375)
T 1t2a_A          255 DYVEAMWLMLQ  265 (375)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHh
Confidence            88776655554

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=99.97  E-value=7.4e-31  Score=215.35  Aligned_cols=212  Identities=16%  Similarity=0.088  Sum_probs=154.0

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC------
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA------   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~------   76 (248)
                      .+++|+++||||+||||++++++|+++|++|++++|+..+......+.+.....++.++.+|++|.++++++++      
T Consensus        18 ~~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   97 (274)
T 1ja9_A           18 PLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHF   97 (274)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            37789999999999999999999999999999999943222223333333335678999999999999988886      


Q ss_pred             -CCCEEEEccccCCCCC----CCCccccchhhhHHHHHHHHHHHHhc---CCCEEEEEecccee-ccCCCCCCCCccCCC
Q 025755           77 -GCTGVFHVACPVPVGK----VPNPEVQLIDPAVVGTKNVLNSCVKA---KVKRVVVVSSIGAV-MLNPNWPKGQVMDEE  147 (248)
Q Consensus        77 -~id~vi~~ag~~~~~~----~~~~~~~~~~~n~~g~~~~~~~~~~~---~~~~iV~vSS~~~~-~~~~~~~~~~~~~e~  147 (248)
                       ++|+||||||......    ..+.+...+++|+.++.++++++.+.   + ++||++||..++ .+.+.          
T Consensus        98 ~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~iv~~sS~~~~~~~~~~----------  166 (274)
T 1ja9_A           98 GGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG-GRIILTSSIAAVMTGIPN----------  166 (274)
T ss_dssp             SCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEE-EEEEEECCGGGTCCSCCS----------
T ss_pred             CCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC-CEEEEEcChHhccCCCCC----------
Confidence             7899999999765321    12334678999999999999998775   4 799999998765 33322          


Q ss_pred             CCCchhhhccccchHHHHHHHHHHHHHHHHHhC---CccEEEEccCeeecCCCCCC-----C----Ccc-HHHHHHHHcC
Q 025755          148 CWSDEEFCKATENYYCLAKTIAEIQALEYAKRG---ELDIVTVCPSIVIGPMLQPT-----I----NTS-SLLLLGFLKG  214 (248)
Q Consensus       148 ~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~---~i~v~~vrpg~i~g~~~~~~-----~----~~~-~~~~~~~~~~  214 (248)
                                 ...|+.||++.+.+++.++.+.   ++++++++||.+++++....     .    ... ......+..+
T Consensus       167 -----------~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (274)
T 1ja9_A          167 -----------HALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANM  235 (274)
T ss_dssp             -----------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHT
T ss_pred             -----------CchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccchhcccccccccccccCchHHHHHHHHhc
Confidence                       2349999998888877776553   69999999999999764310     0    011 2222222111


Q ss_pred             C----------------CCCCCCCchhhhhhhhhccce
Q 025755          215 F----------------FFTTPSHSYMLERTLVLNQGV  236 (248)
Q Consensus       215 ~----------------~l~~~~~~~~~g~~l~vd~g~  236 (248)
                      .                ++......+++|+++.+|||+
T Consensus       236 ~~~~~~~~~~dva~~i~~l~~~~~~~~~G~~~~v~gG~  273 (274)
T 1ja9_A          236 NPLKRIGYPADIGRAVSALCQEESEWINGQVIKLTGGG  273 (274)
T ss_dssp             STTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             CCCCCccCHHHHHHHHHHHhCcccccccCcEEEecCCc
Confidence            1                344444577899999999985

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=99.97  E-value=3e-31  Score=221.37  Aligned_cols=218  Identities=19%  Similarity=0.104  Sum_probs=163.5

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCC--CCE
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAG--CTG   80 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~--id~   80 (248)
                      .++||+||||||+|+||++++++|+++|+      +....            ...+.++.+|++|.+++.+++++  +|+
T Consensus         3 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~------~~~~~------------~~~~~~~~~D~~d~~~~~~~~~~~~~d~   64 (319)
T 4b8w_A            3 YFQSMRILVTGGSGLVGKAIQKVVADGAG------LPGED------------WVFVSSKDADLTDTAQTRALFEKVQPTH   64 (319)
T ss_dssp             CCCCCEEEEETCSSHHHHHHHHHHHTTTC------CTTCE------------EEECCTTTCCTTSHHHHHHHHHHSCCSE
T ss_pred             cccCCeEEEECCCcHHHHHHHHHHHhcCC------ccccc------------ccccCceecccCCHHHHHHHHhhcCCCE
Confidence            46789999999999999999999999998      11110            11234457999999999999986  999


Q ss_pred             EEEccccCCCC-CCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhcccc
Q 025755           81 VFHVACPVPVG-KVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATE  159 (248)
Q Consensus        81 vi~~ag~~~~~-~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~  159 (248)
                      |||+|+..... .....+..++++|+.++.++++++++.++++|||+||.. +|+...   ..+++|+++...  ...|.
T Consensus        65 Vih~A~~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~v~~SS~~-vyg~~~---~~~~~E~~~~~~--~~~p~  138 (319)
T 4b8w_A           65 VIHLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVGARKVVSCLSTC-IFPDKT---TYPIDETMIHNG--PPHNS  138 (319)
T ss_dssp             EEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGG-GSCSSC---CSSBCGGGGGBS--CCCSS
T ss_pred             EEECceecccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEcchh-hcCCCC---CCCccccccccC--CCCCC
Confidence            99999985421 123455778999999999999999999999999999975 555432   556777763210  11223


Q ss_pred             c-hHHHHHHHHHHHHHHHHHhCCccEEEEccCeeecCCCCCC---CCccHHHHHH----HHcCCCCCCCCCchhhhhhhh
Q 025755          160 N-YYCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPT---INTSSLLLLG----FLKGFFFTTPSHSYMLERTLV  231 (248)
Q Consensus       160 ~-~Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~---~~~~~~~~~~----~~~~~~l~~~~~~~~~g~~l~  231 (248)
                      + +|+.+|..+|.++..++++++++++++||+++|||.....   ....+.++.+    +..+..+....++....+.++
T Consensus       139 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~  218 (319)
T 4b8w_A          139 NFGYSYAKRMIDVQNRAYFQQYGCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGTGNPRRQFIY  218 (319)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCCCTTTSCHHHHHHHHHHHHHHHTCCEEEESCSCCEECEEE
T ss_pred             cchHHHHHHHHHHHHHHHHHhhCCCEEEEeeccccCCCCCCCCccccccHHHHHHHHHHhccCCceEEeCCCCeeEEEEe
Confidence            3 5999999999999999988789999999999999987543   2244555666    667766655555555567788


Q ss_pred             hccceeEEEeecc
Q 025755          232 LNQGVRLYRCKIQ  244 (248)
Q Consensus       232 vd~g~~~~~~~~~  244 (248)
                      +|+...++..++.
T Consensus       219 v~Dva~a~~~~~~  231 (319)
T 4b8w_A          219 SLDLAQLFIWVLR  231 (319)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHh
Confidence            8888776655554

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=99.97  E-value=1.9e-30  Score=216.19  Aligned_cols=213  Identities=14%  Similarity=0.068  Sum_probs=152.5

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcC-----CCCCeEEEEccCCCHHHHHHHhC-
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEG-----ASENLQLFKTDLLDYEALCAATA-   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~~Di~d~~~~~~~~~-   76 (248)
                      .+++|+++||||+||||++++++|+++|++|++++|+.... ....+.+..     ...++.++.+|++|.++++++++ 
T Consensus        15 ~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~   93 (303)
T 1yxm_A           15 LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERL-KSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKS   93 (303)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHH
Confidence            36789999999999999999999999999999999986422 222222221     24579999999999999988876 


Q ss_pred             ------CCCEEEEccccCCCCC----CCCccccchhhhHHHHHHHHHHHHhc----CCCEEEEEeccceeccCCCCCCCC
Q 025755           77 ------GCTGVFHVACPVPVGK----VPNPEVQLIDPAVVGTKNVLNSCVKA----KVKRVVVVSSIGAVMLNPNWPKGQ  142 (248)
Q Consensus        77 ------~id~vi~~ag~~~~~~----~~~~~~~~~~~n~~g~~~~~~~~~~~----~~~~iV~vSS~~~~~~~~~~~~~~  142 (248)
                            ++|+||||||......    ..+.+...+++|+.++.++++++.+.    +.++||++||.. ..+.+.     
T Consensus        94 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~-~~~~~~-----  167 (303)
T 1yxm_A           94 TLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPT-KAGFPL-----  167 (303)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCC-TTCCTT-----
T ss_pred             HHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeec-ccCCCc-----
Confidence                  4899999999654321    12334678999999999999998662    457999999976 444332     


Q ss_pred             ccCCCCCCchhhhccccchHHHHHHHHHHHHHHHHHhC---CccEEEEccCeeecCC--CCCCCCccHHHHHHHH----c
Q 025755          143 VMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKRG---ELDIVTVCPSIVIGPM--LQPTINTSSLLLLGFL----K  213 (248)
Q Consensus       143 ~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~---~i~v~~vrpg~i~g~~--~~~~~~~~~~~~~~~~----~  213 (248)
                                      ...|+.+|+..+.+.+.++.+.   ++++++|+||+++||+  .... ...........    .
T Consensus       168 ----------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~-~~~~~~~~~~~~~~p~  230 (303)
T 1yxm_A          168 ----------------AVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYG-SWGQSFFEGSFQKIPA  230 (303)
T ss_dssp             ----------------CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSG-GGGGGGGTTGGGGSTT
T ss_pred             ----------------chhhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccchhhhhcc-ccchHHHHHHHhcCcc
Confidence                            1239999987776666666553   6999999999999994  2211 00000000000    0


Q ss_pred             CC------------CCCCCCCchhhhhhhhhccceeEE
Q 025755          214 GF------------FFTTPSHSYMLERTLVLNQGVRLY  239 (248)
Q Consensus       214 ~~------------~l~~~~~~~~~g~~l~vd~g~~~~  239 (248)
                      ++            ++..+...+++|+++.+|||....
T Consensus       231 ~~~~~~~dvA~~i~~l~~~~~~~~~G~~~~v~gG~~~~  268 (303)
T 1yxm_A          231 KRIGVPEEVSSVVCFLLSPAASFITGQSVDVDGGRSLY  268 (303)
T ss_dssp             SSCBCTHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             cCCCCHHHHHHHHHHHhCcccccCCCcEEEECCCeecc
Confidence            11            455566789999999999997653

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=99.97  E-value=2.9e-30  Score=215.12  Aligned_cols=215  Identities=17%  Similarity=0.109  Sum_probs=157.0

Q ss_pred             EEEEEcCccHHHHHHHHHHHHCC-CeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCC-----CCEE
Q 025755            8 RVCVTGAGGYIASWLVKYLLLKG-YMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAG-----CTGV   81 (248)
Q Consensus         8 ~vlVtG~~g~iG~~~~~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~-----id~v   81 (248)
                      +|+||||+|+||++++++|+++| ++|++++|+..........       ++. +.+|++|.+.+++++++     +|+|
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~-------~~~-~~~d~~~~~~~~~~~~~~~~~~~d~v   72 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLV-------DLN-IADYMDKEDFLIQIMAGEEFGDVEAI   72 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHHH-------TSC-CSEEEEHHHHHHHHHTTCCCSSCCEE
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCchhhhcC-------cce-eccccccHHHHHHHHhccccCCCcEE
Confidence            58999999999999999999999 9999999976432111111       122 67899999999999875     9999


Q ss_pred             EEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccccch
Q 025755           82 FHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENY  161 (248)
Q Consensus        82 i~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~  161 (248)
                      ||+||....  ....+..++++|+.++.++++++.+.+. ++||+||.. +++...   ..+++|+++..      |.+.
T Consensus        73 i~~a~~~~~--~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~-v~g~~~---~~~~~E~~~~~------p~~~  139 (310)
T 1eq2_A           73 FHEGACSST--TEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAA-TYGGRT---SDFIESREYEK------PLNV  139 (310)
T ss_dssp             EECCSCCCT--TCCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEEGG-GGTTCC---SCBCSSGGGCC------CSSH
T ss_pred             EECcccccC--cccCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEeeHH-HhCCCC---CCCCCCCCCCC------CCCh
Confidence            999997654  2345578899999999999999999988 999999976 444321   34566665443      3566


Q ss_pred             HHHHHHHHHHHHHHHHHhCCccEEEEccCeeecCCCCCC---CCccHHHHHHHHcCCCCCCCCCchh-hhhhhhhcccee
Q 025755          162 YCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPT---INTSSLLLLGFLKGFFFTTPSHSYM-LERTLVLNQGVR  237 (248)
Q Consensus       162 Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~-~g~~l~vd~g~~  237 (248)
                      |+.+|..+|.++..++.+++++++++||+++|||.....   ......++..+..+..+....++.. ..+.+++|+...
T Consensus       140 Y~~sK~~~e~~~~~~~~~~g~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~v~Dva~  219 (310)
T 1eq2_A          140 YGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVAD  219 (310)
T ss_dssp             HHHHHHHHHHHHHHHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHcCCCEEEEeCCcEECcCCCCCCccchHHHHHHHHHHcCCCcEEecCCCcceEccEEHHHHHH
Confidence            999999999999999988889999999999999986421   1345566777777765544444434 456678887766


Q ss_pred             EEEeec
Q 025755          238 LYRCKI  243 (248)
Q Consensus       238 ~~~~~~  243 (248)
                      ++..++
T Consensus       220 ~~~~~~  225 (310)
T 1eq2_A          220 VNLWFL  225 (310)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            554443

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=99.96  E-value=1.2e-30  Score=210.81  Aligned_cols=207  Identities=17%  Similarity=0.195  Sum_probs=146.0

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCCeEEEE-EcCCCchhhHHhhhhcCCCCCeEE-EEccCCCHHHHHHHhC-------
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGYMVHGT-VRDPCDEKNAHLKKLEGASENLQL-FKTDLLDYEALCAATA-------   76 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~-~~~Di~d~~~~~~~~~-------   76 (248)
                      ||+++||||+||||++++++|+++|++|+++ +|+... .....+.+.....++.. +.+|++|.++++++++       
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   79 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREK-AEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLG   79 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHH-HHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHT
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHH-HHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhcC
Confidence            5799999999999999999999999999998 676532 22222233323445666 8999999999888764       


Q ss_pred             CCCEEEEccccCCCCC----CCCccccchhhhHHHHHHHHHH----HHhcCCCEEEEEeccceeccCCCCCCCCccCCCC
Q 025755           77 GCTGVFHVACPVPVGK----VPNPEVQLIDPAVVGTKNVLNS----CVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEEC  148 (248)
Q Consensus        77 ~id~vi~~ag~~~~~~----~~~~~~~~~~~n~~g~~~~~~~----~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~  148 (248)
                      ++|+||||||......    ..+.+...+++|+.++.+++++    +++.+.++||++||..++++.+.           
T Consensus        80 ~~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~-----------  148 (245)
T 2ph3_A           80 GLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVNITSVVGILGNPG-----------  148 (245)
T ss_dssp             CCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCSS-----------
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCEEEEEeChhhccCCCC-----------
Confidence            7999999999765321    1234567899999996555554    44557789999999877666533           


Q ss_pred             CCchhhhccccchHHHHHHHHHHHHHHHHHhC---CccEEEEccCeeecCCCCCCCCccHHHHHHHHc----CC------
Q 025755          149 WSDEEFCKATENYYCLAKTIAEIQALEYAKRG---ELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLK----GF------  215 (248)
Q Consensus       149 ~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~---~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~----~~------  215 (248)
                                ...|+.||++.+.+.+.++.+.   ++++++++||.++|++....   ..........    +.      
T Consensus       149 ----------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~---~~~~~~~~~~~~~~~~~~~~~d  215 (245)
T 2ph3_A          149 ----------QANYVASKAGLIGFTRAVAKEYAQRGITVNAVAPGFIETEMTERL---PQEVKEAYLKQIPAGRFGRPEE  215 (245)
T ss_dssp             ----------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTS---CHHHHHHHHHTCTTCSCBCHHH
T ss_pred             ----------CcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEEEeecCcchhhc---CHHHHHHHHhcCCCCCCcCHHH
Confidence                      2349999986666666555432   69999999999999864321   1111111111    11      


Q ss_pred             ------CCCCCCCchhhhhhhhhcccee
Q 025755          216 ------FFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       216 ------~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                            ++..+...+++|+++.+|||..
T Consensus       216 va~~~~~l~~~~~~~~~G~~~~v~gg~~  243 (245)
T 2ph3_A          216 VAEAVAFLVSEKAGYITGQTLCVDGGLT  243 (245)
T ss_dssp             HHHHHHHHTSGGGTTCCSCEEEESTTCS
T ss_pred             HHHHHHHHhCcccccccCCEEEECCCCC
Confidence                  3444455788999999999964

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=99.96  E-value=1.3e-30  Score=218.41  Aligned_cols=213  Identities=17%  Similarity=0.117  Sum_probs=158.1

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC--CCCEEE
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA--GCTGVF   82 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~--~id~vi   82 (248)
                      ++|+|+||||+|+||++++++|+++|++|+++.|+.                     .+|++|.+++.++++  ++|+||
T Consensus         2 ~~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~---------------------~~D~~d~~~~~~~~~~~~~d~vi   60 (321)
T 1e6u_A            2 AKQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD---------------------ELNLLDSRAVHDFFASERIDQVY   60 (321)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT---------------------TCCTTCHHHHHHHHHHHCCSEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc---------------------cCCccCHHHHHHHHHhcCCCEEE
Confidence            458999999999999999999999999999887653                     279999999999998  899999


Q ss_pred             EccccCCCC-CCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccc-cc
Q 025755           83 HVACPVPVG-KVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKAT-EN  160 (248)
Q Consensus        83 ~~ag~~~~~-~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~-~~  160 (248)
                      |+|+..... .....+..++++|+.++.++++++.+.+.+++||+||... |+...   ..+++|+++...  ...| .+
T Consensus        61 h~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~v-yg~~~---~~~~~E~~~~~~--~~~p~~~  134 (321)
T 1e6u_A           61 LAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCI-YPKLA---KQPMAESELLQG--TLEPTNE  134 (321)
T ss_dssp             ECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGG-SCTTC---CSSBCGGGTTSS--CCCGGGH
T ss_pred             EcCeecCCcchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccHHH-cCCCC---CCCcCccccccC--CCCCCCC
Confidence            999975421 0122346788999999999999999999899999999764 44322   456677653210  1122 24


Q ss_pred             hHHHHHHHHHHHHHHHHHhCCccEEEEccCeeecCCCCCC---CCccHHHHHHHHc----C-CCCCCCCCchhhhhhhhh
Q 025755          161 YYCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPT---INTSSLLLLGFLK----G-FFFTTPSHSYMLERTLVL  232 (248)
Q Consensus       161 ~Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~---~~~~~~~~~~~~~----~-~~l~~~~~~~~~g~~l~v  232 (248)
                      .|+.+|..+|.+++.++.+++++++++||+++|||.....   ......++..+..    | ..+....++....+.+++
T Consensus       135 ~Y~~sK~~~E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~i~v  214 (321)
T 1e6u_A          135 PYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHV  214 (321)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEH
T ss_pred             ccHHHHHHHHHHHHHHHHHhCCCEEEEEeCCcCCcCCCCCCCCCccHHHHHHHHHHhhhcCCCceEEcCCCCEEEEeEEH
Confidence            6999999999999999887789999999999999987532   1344556666543    2 333323334344567888


Q ss_pred             ccceeEEEeecc
Q 025755          233 NQGVRLYRCKIQ  244 (248)
Q Consensus       233 d~g~~~~~~~~~  244 (248)
                      |+...++..++.
T Consensus       215 ~Dva~~~~~~~~  226 (321)
T 1e6u_A          215 DDMAAASIHVME  226 (321)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHh
Confidence            887766655544

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=99.96  E-value=2e-29  Score=204.23  Aligned_cols=174  Identities=22%  Similarity=0.197  Sum_probs=132.8

Q ss_pred             CCC-CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC---
Q 025755            1 MSG-EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA---   76 (248)
Q Consensus         1 m~~-l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~---   76 (248)
                      |+. +++|+++||||+||||+++++.|+++|++|++++|+.+. .....+.+.....++.++.+|++|.++++++++   
T Consensus         1 m~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~-~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~   79 (247)
T 2jah_A            1 MPSALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEK-LRALGDELTAAGAKVHVLELDVADRQGVDAAVASTV   79 (247)
T ss_dssp             --CTTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHH-HHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHH-HHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHH
Confidence            443 788999999999999999999999999999999998632 222233333334578999999999999888775   


Q ss_pred             ----CCCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHHh----cCCCEEEEEeccceeccCCCCCCCCcc
Q 025755           77 ----GCTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCVK----AKVKRVVVVSSIGAVMLNPNWPKGQVM  144 (248)
Q Consensus        77 ----~id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~~----~~~~~iV~vSS~~~~~~~~~~~~~~~~  144 (248)
                          ++|+||||||.......    .+.|...+++|+.|+.++++++.+    .+ ++||++||..+..+.+..      
T Consensus        80 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~------  152 (247)
T 2jah_A           80 EALGGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK-GTVVQMSSIAGRVNVRNA------  152 (247)
T ss_dssp             HHHSCCSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTCCCTTC------
T ss_pred             HHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CEEEEEccHHhcCCCCCC------
Confidence                68999999997644321    234567899999999998888764    35 899999998776554332      


Q ss_pred             CCCCCCchhhhccccchHHHHHHHH----HHHHHHHHHhCCccEEEEccCeeecCCCC
Q 025755          145 DEECWSDEEFCKATENYYCLAKTIA----EIQALEYAKRGELDIVTVCPSIVIGPMLQ  198 (248)
Q Consensus       145 ~e~~~~~~~~~~~~~~~Y~~sK~~~----e~l~~~~~~~~~i~v~~vrpg~i~g~~~~  198 (248)
                                     ..|+.||+..    +.++.+++++ |++||+|+||.+.+++..
T Consensus       153 ---------------~~Y~asK~a~~~~~~~la~e~~~~-gi~v~~v~PG~v~T~~~~  194 (247)
T 2jah_A          153 ---------------AVYQATKFGVNAFSETLRQEVTER-GVRVVVIEPGTTDTELRG  194 (247)
T ss_dssp             ---------------HHHHHHHHHHHHHHHHHHHHHGGG-TCEEEEEEECSBSSSGGG
T ss_pred             ---------------cHHHHHHHHHHHHHHHHHHHhccc-CcEEEEEECCCCCCcchh
Confidence                           3399999744    4555555544 599999999999998753

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=99.96  E-value=1.3e-29  Score=213.66  Aligned_cols=212  Identities=19%  Similarity=0.154  Sum_probs=153.1

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCC--CCEE
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAG--CTGV   81 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~--id~v   81 (248)
                      ++||+|+||||+||||++++++|+++|++|++++|+..... ..+.   . ..++.++.+|++|.+++.+++++  +|+|
T Consensus        19 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~l~---~-~~~~~~~~~Dl~d~~~~~~~~~~~~~D~v   93 (333)
T 2q1w_A           19 SHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRR-EHLK---D-HPNLTFVEGSIADHALVNQLIGDLQPDAV   93 (333)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCG-GGSC---C-CTTEEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccch-hhHh---h-cCCceEEEEeCCCHHHHHHHHhccCCcEE
Confidence            67899999999999999999999999999999999764211 1111   1 15788999999999999999987  9999


Q ss_pred             EEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccC-CCCCCCCccCCCCCCchhhhcccc-
Q 025755           82 FHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLN-PNWPKGQVMDEECWSDEEFCKATE-  159 (248)
Q Consensus        82 i~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~-~~~~~~~~~~e~~~~~~~~~~~~~-  159 (248)
                      |||||..... ...+ .. +++|+.++.++++++.+.+.++|||+||... ++. +... ..+++|++        .|. 
T Consensus        94 ih~A~~~~~~-~~~~-~~-~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~-~g~~~~~~-~~~~~E~~--------~p~~  160 (333)
T 2q1w_A           94 VHTAASYKDP-DDWY-ND-TLTNCVGGSNVVQAAKKNNVGRFVYFQTALC-YGVKPIQQ-PVRLDHPR--------NPAN  160 (333)
T ss_dssp             EECCCCCSCT-TCHH-HH-HHHHTHHHHHHHHHHHHTTCSEEEEEEEGGG-GCSCCCSS-SBCTTSCC--------CCTT
T ss_pred             EECceecCCC-ccCC-hH-HHHHHHHHHHHHHHHHHhCCCEEEEECcHHH-hCCCcccC-CCCcCCCC--------CCCC
Confidence            9999976543 1222 23 8999999999999999998899999999664 441 1001 12566665        233 


Q ss_pred             chHHHHHHHHHHHHHH-HHHhCCccEEEEccCeeecCCCCCCCCccHHHHHHHHcCCCCCCCCCchhhhhhhhhccceeE
Q 025755          160 NYYCLAKTIAEIQALE-YAKRGELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKGFFFTTPSHSYMLERTLVLNQGVRL  238 (248)
Q Consensus       160 ~~Y~~sK~~~e~l~~~-~~~~~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~l~vd~g~~~  238 (248)
                      +.|+.+|..+|.++.. ++     +++++||+++|||...  ....+.++..+..+.  .... +....+.+++++...+
T Consensus       161 ~~Y~~sK~~~E~~~~~s~~-----~~~ilR~~~v~gp~~~--~~~~~~~~~~~~~~~--~~~~-~~~~~~~i~v~Dva~a  230 (333)
T 2q1w_A          161 SSYAISKSANEDYLEYSGL-----DFVTFRLANVVGPRNV--SGPLPIFFQRLSEGK--KCFV-TKARRDFVFVKDLARA  230 (333)
T ss_dssp             CHHHHHHHHHHHHHHHHTC-----CEEEEEESEEESTTCC--SSHHHHHHHHHHTTC--CCEE-EECEECEEEHHHHHHH
T ss_pred             CchHHHHHHHHHHHHhhhC-----CeEEEeeceEECcCCc--CcHHHHHHHHHHcCC--eeeC-CCceEeeEEHHHHHHH
Confidence            5699999999999887 64     7899999999999832  234555666666654  1111 2223445666666555


Q ss_pred             EEeec
Q 025755          239 YRCKI  243 (248)
Q Consensus       239 ~~~~~  243 (248)
                      +..++
T Consensus       231 i~~~~  235 (333)
T 2q1w_A          231 TVRAV  235 (333)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            44443

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=99.96  E-value=3.7e-30  Score=217.60  Aligned_cols=221  Identities=19%  Similarity=0.102  Sum_probs=162.9

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCC-------CeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHh-
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKG-------YMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAAT-   75 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~-   75 (248)
                      +++|+|+||||+||||++++++|+++|       ++|++++|+......       ....++.++.+|++|.+++.+++ 
T Consensus        12 ~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~-------~~~~~~~~~~~Dl~d~~~~~~~~~   84 (342)
T 2hrz_A           12 FQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA-------GFSGAVDARAADLSAPGEAEKLVE   84 (342)
T ss_dssp             CSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT-------TCCSEEEEEECCTTSTTHHHHHHH
T ss_pred             ccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc-------ccCCceeEEEcCCCCHHHHHHHHh
Confidence            678999999999999999999999999       899999997642211       12356889999999999999988 


Q ss_pred             CCCCEEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcC-----CCEEEEEeccceeccCCCCCCCCccCCCCCC
Q 025755           76 AGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAK-----VKRVVVVSSIGAVMLNPNWPKGQVMDEECWS  150 (248)
Q Consensus        76 ~~id~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~-----~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~  150 (248)
                      .++|+|||+||..... ....+..++++|+.++.++++++.+.+     .++||++||... ++...   ..+++|+++.
T Consensus        85 ~~~d~vih~A~~~~~~-~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~-~~~~~---~~~~~E~~~~  159 (342)
T 2hrz_A           85 ARPDVIFHLAAIVSGE-AELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAV-FGAPL---PYPIPDEFHT  159 (342)
T ss_dssp             TCCSEEEECCCCCHHH-HHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGG-CCSSC---CSSBCTTCCC
T ss_pred             cCCCEEEECCccCccc-ccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHh-hCCCC---CCCcCCCCCC
Confidence            4899999999975421 123456789999999999999998875     789999999764 44321   3567777765


Q ss_pred             chhhhccccchHHHHHHHHHHHHHHHHHhCCccEEEEccCeeec-CCCCCC--CCccHHHHHHHHcCCCCCCCCCchhhh
Q 025755          151 DEEFCKATENYYCLAKTIAEIQALEYAKRGELDIVTVCPSIVIG-PMLQPT--INTSSLLLLGFLKGFFFTTPSHSYMLE  227 (248)
Q Consensus       151 ~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g-~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~g  227 (248)
                      .+      .+.|+.+|.++|.++.+++.+++++..++||+.+|| |.....  ......++.....+.....+..+....
T Consensus       160 ~~------~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (342)
T 2hrz_A          160 TP------LTSYGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAAASGFFSNILREPLVGQEAVLPVPESIRH  233 (342)
T ss_dssp             CC------SSHHHHHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCCSGGGHHHHHHHHHHTTCCEEECSCTTCEE
T ss_pred             CC------cchHHHHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcchhHHHHHHHHHHHhcCCCeeccCCCccce
Confidence            43      456999999999999999988789999999999998 554321  123445566666666433222222222


Q ss_pred             hhhhhccceeEEEee
Q 025755          228 RTLVLNQGVRLYRCK  242 (248)
Q Consensus       228 ~~l~vd~g~~~~~~~  242 (248)
                      ..+++++...++..+
T Consensus       234 ~~~~v~Dva~~~~~~  248 (342)
T 2hrz_A          234 WHASPRSAVGFLIHG  248 (342)
T ss_dssp             EEECHHHHHHHHHHH
T ss_pred             eeEehHHHHHHHHHH
Confidence            345666655444333

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=99.96  E-value=3.4e-29  Score=204.79  Aligned_cols=210  Identities=15%  Similarity=0.114  Sum_probs=151.6

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCC---CeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC----
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKG---YMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA----   76 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~----   76 (248)
                      +++|+++||||+||||++++++|+++|   ++|++++|+.....  .+..+.....++.++.+|++|.++++++++    
T Consensus        19 ~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~--~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   96 (267)
T 1sny_A           19 SHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAK--ELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEG   96 (267)
T ss_dssp             -CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCH--HHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhH--HHHHhhccCCceEEEEecCCChHHHHHHHHHHHH
Confidence            678999999999999999999999999   99999999875332  222222224579999999999999988876    


Q ss_pred             -----CCCEEEEccccCC-CCC----CCCccccchhhhHHHHHHHHHHHHhc----------C-----CCEEEEEeccce
Q 025755           77 -----GCTGVFHVACPVP-VGK----VPNPEVQLIDPAVVGTKNVLNSCVKA----------K-----VKRVVVVSSIGA  131 (248)
Q Consensus        77 -----~id~vi~~ag~~~-~~~----~~~~~~~~~~~n~~g~~~~~~~~~~~----------~-----~~~iV~vSS~~~  131 (248)
                           ++|+||||||... ...    ..+.+...+++|+.++.++++++.+.          +     .++||++||..+
T Consensus        97 ~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~  176 (267)
T 1sny_A           97 VTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILG  176 (267)
T ss_dssp             HHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGG
T ss_pred             hcCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEEecccc
Confidence                 7999999999865 221    12344678999999999999888654          2     579999999876


Q ss_pred             eccCCCCCCCCccCCCCCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCCCccHHH-
Q 025755          132 VMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTINTSSLL-  207 (248)
Q Consensus       132 ~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~~~~~~~-  207 (248)
                      +.+.+...                  +...|+.||++.+.+++.++.+   .++++++|+||++.+++........+.. 
T Consensus       177 ~~~~~~~~------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~  238 (267)
T 1sny_A          177 SIQGNTDG------------------GMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGSSAPLDVPTS  238 (267)
T ss_dssp             CSTTCCSC------------------CCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCTTCSBCHHHH
T ss_pred             cccCCCCC------------------CchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCCCCCCCCCCHHHH
Confidence            55432100                  1234999998877777776654   3699999999999999865432222221 


Q ss_pred             HHHHHcCCCCCCCCCchhhhhhhhhccce
Q 025755          208 LLGFLKGFFFTTPSHSYMLERTLVLNQGV  236 (248)
Q Consensus       208 ~~~~~~~~~l~~~~~~~~~g~~l~vd~g~  236 (248)
                      ...+.   .+......+.+|+.+.+||+.
T Consensus       239 a~~~~---~~~~~~~~~~~G~~~~~~g~~  264 (267)
T 1sny_A          239 TGQIV---QTISKLGEKQNGGFVNYDGTP  264 (267)
T ss_dssp             HHHHH---HHHHHCCGGGTTCEECTTSCB
T ss_pred             HHHHH---HHHHhcCcCCCCcEEccCCcC
Confidence            11111   112223567889988889875

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=99.96  E-value=3.2e-30  Score=212.67  Aligned_cols=205  Identities=17%  Similarity=0.142  Sum_probs=148.3

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC------
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA------   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~------   76 (248)
                      ++++|+++||||+||||++++++|+++|++|++++|+... .....+.+   ..++.++++|++|.++++++++      
T Consensus        27 ~l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~-~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  102 (281)
T 3ppi_A           27 QFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEK-GKALADEL---GNRAEFVSTNVTSEDSVLAAIEAANQLG  102 (281)
T ss_dssp             GGTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHH-HHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHTTSS
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHH-HHHHHHHh---CCceEEEEcCCCCHHHHHHHHHHHHHhC
Confidence            4678999999999999999999999999999999998642 22222233   4579999999999999988876      


Q ss_pred             CCCEEEEc-cccCCCCCC---------CCccccchhhhHHHHHHHHHHHHhc----------CCCEEEEEeccceeccCC
Q 025755           77 GCTGVFHV-ACPVPVGKV---------PNPEVQLIDPAVVGTKNVLNSCVKA----------KVKRVVVVSSIGAVMLNP  136 (248)
Q Consensus        77 ~id~vi~~-ag~~~~~~~---------~~~~~~~~~~n~~g~~~~~~~~~~~----------~~~~iV~vSS~~~~~~~~  136 (248)
                      ++|++||| |+.......         .+.+...+++|+.++.++++++.+.          +.++||++||..++.+.+
T Consensus       103 ~id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  182 (281)
T 3ppi_A          103 RLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYEGQI  182 (281)
T ss_dssp             EEEEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGTSCCT
T ss_pred             CCCeEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecccccCCCC
Confidence            57999999 554332211         1225678999999999999887632          346999999988776654


Q ss_pred             CCCCCCccCCCCCCchhhhccccchHHHHHHH----HHHHHHHHHHhCCccEEEEccCeeecCCCCCCCCccHHHHHHHH
Q 025755          137 NWPKGQVMDEECWSDEEFCKATENYYCLAKTI----AEIQALEYAKRGELDIVTVCPSIVIGPMLQPTINTSSLLLLGFL  212 (248)
Q Consensus       137 ~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~----~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~  212 (248)
                      ..                     ..|+.||++    ++.++.++.++ ++++++|+||.+.+++.....   ......+.
T Consensus       183 ~~---------------------~~Y~asKaa~~~~~~~la~e~~~~-gi~v~~v~PG~v~T~~~~~~~---~~~~~~~~  237 (281)
T 3ppi_A          183 GQ---------------------TAYAAAKAGVIGLTIAAARDLSSA-GIRVNTIAPGTMKTPIMESVG---EEALAKFA  237 (281)
T ss_dssp             TC---------------------HHHHHHHHHHHHHHHHHHHHHGGG-TEEEEEEEECSBCCHHHHTTC---HHHHHHHH
T ss_pred             CC---------------------cccHHHHHHHHHHHHHHHHHHhhc-CeEEEEEecCcCCchhhhccc---HHHHHHHH
Confidence            32                     339999974    44555555444 599999999999998643211   11111111


Q ss_pred             c-----CC------------CCCCCCCchhhhhhhhhccceeE
Q 025755          213 K-----GF------------FFTTPSHSYMLERTLVLNQGVRL  238 (248)
Q Consensus       213 ~-----~~------------~l~~~~~~~~~g~~l~vd~g~~~  238 (248)
                      .     ++            ++..  +.|++|+++.+|||...
T Consensus       238 ~~~~~~~~~~~pedvA~~v~~l~s--~~~~tG~~i~vdGG~~~  278 (281)
T 3ppi_A          238 ANIPFPKRLGTPDEFADAAAFLLT--NGYINGEVMRLDGAQRF  278 (281)
T ss_dssp             HTCCSSSSCBCHHHHHHHHHHHHH--CSSCCSCEEEESTTCCC
T ss_pred             hcCCCCCCCCCHHHHHHHHHHHHc--CCCcCCcEEEECCCccc
Confidence            1     11            3332  47999999999999763

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=99.96  E-value=3.4e-30  Score=209.05  Aligned_cols=210  Identities=15%  Similarity=0.114  Sum_probs=146.1

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcC---CCCCeEEEEccCCCHHHHHHHhC---
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEG---ASENLQLFKTDLLDYEALCAATA---   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~~Di~d~~~~~~~~~---   76 (248)
                      ++++|++|||||+||||+++++.|+++|++|++++|+.... ....+.+..   ...++.++.+|++|.++++++++   
T Consensus         4 ~~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   82 (250)
T 3nyw_A            4 EKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNL-EKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIH   82 (250)
T ss_dssp             -CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHH-HHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHH-HHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHH
Confidence            47889999999999999999999999999999999987432 222222221   22678899999999999888775   


Q ss_pred             ----CCCEEEEccccCCCCCC---CCccccchhhhHHHHHHHHHHHHh----cCCCEEEEEeccceeccCCCCCCCCccC
Q 025755           77 ----GCTGVFHVACPVPVGKV---PNPEVQLIDPAVVGTKNVLNSCVK----AKVKRVVVVSSIGAVMLNPNWPKGQVMD  145 (248)
Q Consensus        77 ----~id~vi~~ag~~~~~~~---~~~~~~~~~~n~~g~~~~~~~~~~----~~~~~iV~vSS~~~~~~~~~~~~~~~~~  145 (248)
                          ++|+||||||.......   .+.|...+++|+.++.++++++.+    .+.++||++||..+..+.+..       
T Consensus        83 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-------  155 (250)
T 3nyw_A           83 QKYGAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAKYGFADG-------  155 (250)
T ss_dssp             HHHCCEEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC-------CCT-------
T ss_pred             HhcCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHhcCCCCCC-------
Confidence                58999999998654322   234567899999999988888754    467899999998877644322       


Q ss_pred             CCCCCchhhhccccchHHHHHHHHHHH----HHHHHHhCCccEEEEccCeeecCCCCCC-------CCccHHHHHHHHcC
Q 025755          146 EECWSDEEFCKATENYYCLAKTIAEIQ----ALEYAKRGELDIVTVCPSIVIGPMLQPT-------INTSSLLLLGFLKG  214 (248)
Q Consensus       146 e~~~~~~~~~~~~~~~Y~~sK~~~e~l----~~~~~~~~~i~v~~vrpg~i~g~~~~~~-------~~~~~~~~~~~~~~  214 (248)
                                    ..|+.||++.+.+    +.+++++ |++||+|+||.+.+++....       ....+.-+..... 
T Consensus       156 --------------~~Y~asKaa~~~l~~~la~e~~~~-gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~p~dva~~v~-  219 (250)
T 3nyw_A          156 --------------GIYGSTKFALLGLAESLYRELAPL-GIRVTTLCPGWVNTDMAKKAGTPFKDEEMIQPDDLLNTIR-  219 (250)
T ss_dssp             --------------THHHHHHHHHHHHHHHHHHHHGGG-TEEEEEEEESSBCSHHHHHTTCCSCGGGSBCHHHHHHHHH-
T ss_pred             --------------cchHHHHHHHHHHHHHHHHHhhhc-CcEEEEEecCcccCchhhhcCCCcccccCCCHHHHHHHHH-
Confidence                          2399999755555    4454443 59999999999999753211       0111222222221 


Q ss_pred             CCCCC-CCCchhhhhhhhhcccee
Q 025755          215 FFFTT-PSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       215 ~~l~~-~~~~~~~g~~l~vd~g~~  237 (248)
                       ++.+ +...++++.+|.||||..
T Consensus       220 -~l~s~~~~~~~~~~~i~vd~~~~  242 (250)
T 3nyw_A          220 -CLLNLSENVCIKDIVFEMKKSII  242 (250)
T ss_dssp             -HHHTSCTTEECCEEEEEEHHHHH
T ss_pred             -HHHcCCCceEeeEEEEEeecccc
Confidence             4444 445678888999999864

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=99.96  E-value=2.4e-29  Score=212.96  Aligned_cols=209  Identities=13%  Similarity=0.109  Sum_probs=152.1

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCch------hhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDE------KNAHLKKLEGASENLQLFKTDLLDYEALCAATA   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~------~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~   76 (248)
                      ++++|+++||||+||||++++++|+++|++|++++|+....      .....+.+.....++.++.+|++|.++++++++
T Consensus        42 ~l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~  121 (346)
T 3kvo_A           42 RLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAVE  121 (346)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHH
Confidence            46889999999999999999999999999999999987532      112233334445678999999999999888876


Q ss_pred             -------CCCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHHh----cCCCEEEEEeccceecc--CCCCC
Q 025755           77 -------GCTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCVK----AKVKRVVVVSSIGAVML--NPNWP  139 (248)
Q Consensus        77 -------~id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~~----~~~~~iV~vSS~~~~~~--~~~~~  139 (248)
                             ++|+||||||.......    .+.++.++++|+.++.++++++.+    .+.++||++||..++.+  .+.  
T Consensus       122 ~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~~~~~~~~~--  199 (346)
T 3kvo_A          122 KAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPVWFKQ--  199 (346)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCCCCGGGTSS--
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHHcCCCCCCC--
Confidence                   78999999998654322    234567899999999999998854    35689999999876654  221  


Q ss_pred             CCCccCCCCCCchhhhccccchHHHHHHHHHHHHHHHHHh--CCccEEEEccCe-eecCCCCC------C-CCccHHHHH
Q 025755          140 KGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKR--GELDIVTVCPSI-VIGPMLQP------T-INTSSLLLL  209 (248)
Q Consensus       140 ~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~--~~i~v~~vrpg~-i~g~~~~~------~-~~~~~~~~~  209 (248)
                                         ...|+.||+..+.+.+.++.+  .+|+||+|+||+ +.+++...      . ....+..+.
T Consensus       200 -------------------~~~Y~aSKaal~~l~~~la~e~~~gIrvn~v~PG~~i~T~~~~~~~~~~~~~r~~~pedvA  260 (346)
T 3kvo_A          200 -------------------HCAYTIAKYGMSMYVLGMAEEFKGEIAVNALWPKTAIHTAAMDMLGGPGIESQCRKVDIIA  260 (346)
T ss_dssp             -------------------SHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECSBCBCCHHHHHHCC--CGGGCBCTHHHH
T ss_pred             -------------------chHHHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCccccHHHHhhccccccccCCCHHHHH
Confidence                               234999998666666666554  369999999996 66543110      0 001112222


Q ss_pred             HHHcCCCCCCCCCchhhhhhhhhccce
Q 025755          210 GFLKGFFFTTPSHSYMLERTLVLNQGV  236 (248)
Q Consensus       210 ~~~~~~~l~~~~~~~~~g~~l~vd~g~  236 (248)
                      ....  ++.++ ..++||+++ +|||.
T Consensus       261 ~~v~--~L~s~-~~~itG~~i-vdgg~  283 (346)
T 3kvo_A          261 DAAY--SIFQK-PKSFTGNFV-IDENI  283 (346)
T ss_dssp             HHHH--HHHTS-CTTCCSCEE-EHHHH
T ss_pred             HHHH--HHHhc-CCCCCceEE-ECCcE
Confidence            2221  66667 889999988 99994

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=99.96  E-value=2.7e-29  Score=202.74  Aligned_cols=210  Identities=13%  Similarity=0.072  Sum_probs=154.5

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCC-------eEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGY-------MVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-   76 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~-------~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-   76 (248)
                      ++|+++||||+||||++++++|+++|+       +|++++|+... .....+.+.....++.++.+|++|.++++++++ 
T Consensus         1 ~~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~   79 (244)
T 2bd0_A            1 MKHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAAD-LEKISLECRAEGALTDTITADISDMADVRRLTTH   79 (244)
T ss_dssp             -CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHH-HHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHH-HHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHH
Confidence            368999999999999999999999999       99999997632 222233333335678999999999999888876 


Q ss_pred             ------CCCEEEEccccCCCCC----CCCccccchhhhHHHHHHHHHHHHh----cCCCEEEEEeccceeccCCCCCCCC
Q 025755           77 ------GCTGVFHVACPVPVGK----VPNPEVQLIDPAVVGTKNVLNSCVK----AKVKRVVVVSSIGAVMLNPNWPKGQ  142 (248)
Q Consensus        77 ------~id~vi~~ag~~~~~~----~~~~~~~~~~~n~~g~~~~~~~~~~----~~~~~iV~vSS~~~~~~~~~~~~~~  142 (248)
                            ++|+||||||......    ..+.+...+++|+.++.++++++.+    .+.++||++||..++.+.+.     
T Consensus        80 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~-----  154 (244)
T 2bd0_A           80 IVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRH-----  154 (244)
T ss_dssp             HHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT-----
T ss_pred             HHHhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecchhcCCCCC-----
Confidence                  6999999999765431    1234567899999999999888754    46789999999876654432     


Q ss_pred             ccCCCCCCchhhhccccchHHHHHHHHHHHHHHHHH---hCCccEEEEccCeeecCCCCCCCC------ccHHHHHHHHc
Q 025755          143 VMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAK---RGELDIVTVCPSIVIGPMLQPTIN------TSSLLLLGFLK  213 (248)
Q Consensus       143 ~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~---~~~i~v~~vrpg~i~g~~~~~~~~------~~~~~~~~~~~  213 (248)
                                      ...|+.||++.+.+.+.++.   ..++++++++||+++||+......      ..+.-+.....
T Consensus       155 ----------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~dva~~~~  218 (244)
T 2bd0_A          155 ----------------SSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDDEMQALMMMPEDIAAPVV  218 (244)
T ss_dssp             ----------------CHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCCSTTGGGSBCHHHHHHHHH
T ss_pred             ----------------CchhHHHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhhhccccccccCCCHHHHHHHHH
Confidence                            23499999877777766654   246999999999999998653211      11121212111


Q ss_pred             CCCCCCCCCchhhhhhhhhccceeE
Q 025755          214 GFFFTTPSHSYMLERTLVLNQGVRL  238 (248)
Q Consensus       214 ~~~l~~~~~~~~~g~~l~vd~g~~~  238 (248)
                        ++......+++|+++..+++...
T Consensus       219 --~l~~~~~~~~~g~~~~~~~~~~~  241 (244)
T 2bd0_A          219 --QAYLQPSRTVVEEIILRPTSGDI  241 (244)
T ss_dssp             --HHHTSCTTEEEEEEEEEETTCCC
T ss_pred             --HHHhCCccccchheEEecccccc
Confidence              45566778999999998887653

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.96  E-value=2.1e-29  Score=206.19  Aligned_cols=166  Identities=19%  Similarity=0.223  Sum_probs=140.4

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEEcc
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFHVA   85 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~~a   85 (248)
                      ||+|+||||+|+||++++++|+++|++|++++|+.....          ..++.++.+|++|.+++.++++++|+|||||
T Consensus         2 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~----------~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a   71 (267)
T 3ay3_A            2 LNRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAA----------EAHEEIVACDLADAQAVHDLVKDCDGIIHLG   71 (267)
T ss_dssp             EEEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCC----------CTTEEECCCCTTCHHHHHHHHTTCSEEEECC
T ss_pred             CceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCcccc----------CCCccEEEccCCCHHHHHHHHcCCCEEEECC
Confidence            479999999999999999999999999999999864211          1357889999999999999999999999999


Q ss_pred             ccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccccchHHHH
Q 025755           86 CPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLA  165 (248)
Q Consensus        86 g~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~s  165 (248)
                      |...    ...+...+++|+.++.++++++.+.+.++|||+||..++...+.   ..+++|+++..+      .+.|+.+
T Consensus        72 ~~~~----~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~~~---~~~~~E~~~~~~------~~~Y~~s  138 (267)
T 3ay3_A           72 GVSV----ERPWNDILQANIIGAYNLYEAARNLGKPRIVFASSNHTIGYYPR---TTRIDTEVPRRP------DSLYGLS  138 (267)
T ss_dssp             SCCS----CCCHHHHHHHTHHHHHHHHHHHHHTTCCEEEEEEEGGGSTTSBT---TSCBCTTSCCCC------CSHHHHH
T ss_pred             cCCC----CCCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCHHHhCCCCC---CCCCCCCCCCCC------CChHHHH
Confidence            9762    34557789999999999999999998899999999765543322   456778776544      4569999


Q ss_pred             HHHHHHHHHHHHHhCCccEEEEccCeeec
Q 025755          166 KTIAEIQALEYAKRGELDIVTVCPSIVIG  194 (248)
Q Consensus       166 K~~~e~l~~~~~~~~~i~v~~vrpg~i~g  194 (248)
                      |...|.+++.++.+.+++++++||+++|+
T Consensus       139 K~~~e~~~~~~~~~~gi~~~~lrp~~v~~  167 (267)
T 3ay3_A          139 KCFGEDLASLYYHKFDIETLNIRIGSCFP  167 (267)
T ss_dssp             HHHHHHHHHHHHHTTCCCEEEEEECBCSS
T ss_pred             HHHHHHHHHHHHHHcCCCEEEEeceeecC
Confidence            99999999999887789999999999984

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=99.96  E-value=1.3e-29  Score=205.12  Aligned_cols=206  Identities=15%  Similarity=0.086  Sum_probs=147.3

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCC-CCCeEEEEccC--CCHHHHHHHhC---
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGA-SENLQLFKTDL--LDYEALCAATA---   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Di--~d~~~~~~~~~---   76 (248)
                      .+++|+++||||+||||+++++.|+++|++|++++|+.... ....+.+... ..+..++.+|+  +|.++++++++   
T Consensus        11 ~l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~   89 (247)
T 3i1j_A           11 LLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASL-AEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVE   89 (247)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHH
T ss_pred             cCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHH-HHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHH
Confidence            37889999999999999999999999999999999986432 2222333222 25677788777  99988887765   


Q ss_pred             ----CCCEEEEccccCCCCC-----CCCccccchhhhHHHHHHHHHHHHh----cCCCEEEEEeccceeccCCCCCCCCc
Q 025755           77 ----GCTGVFHVACPVPVGK-----VPNPEVQLIDPAVVGTKNVLNSCVK----AKVKRVVVVSSIGAVMLNPNWPKGQV  143 (248)
Q Consensus        77 ----~id~vi~~ag~~~~~~-----~~~~~~~~~~~n~~g~~~~~~~~~~----~~~~~iV~vSS~~~~~~~~~~~~~~~  143 (248)
                          ++|+||||||......     ..+.++..+++|+.++.++++++.+    .+.++||++||..+..+.+..     
T Consensus        90 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~-----  164 (247)
T 3i1j_A           90 HEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGRKGRANW-----  164 (247)
T ss_dssp             HHHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECCGGGTSCCTTC-----
T ss_pred             HhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcchhhcCCCCCc-----
Confidence                6899999999754321     1244577899999999999888853    456899999998876655432     


Q ss_pred             cCCCCCCchhhhccccchHHHHHHHHHHHHHHHHHh----CCccEEEEccCeeecCCCCCC---C----CccHHHHHHHH
Q 025755          144 MDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKR----GELDIVTVCPSIVIGPMLQPT---I----NTSSLLLLGFL  212 (248)
Q Consensus       144 ~~e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~----~~i~v~~vrpg~i~g~~~~~~---~----~~~~~~~~~~~  212 (248)
                                      ..|+.||++.+.+.+.++.+    .+++|++|+||.+.+++....   .    ...+.-+....
T Consensus       165 ----------------~~Y~~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~p~dva~~~  228 (247)
T 3i1j_A          165 ----------------GAYGVSKFATEGLMQTLADELEGVTAVRANSINPGATRTGMRAQAYPDENPLNNPAPEDIMPVY  228 (247)
T ss_dssp             ----------------HHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSHHHHHHSTTSCGGGSCCGGGGTHHH
T ss_pred             ----------------chhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCccchhcccccCccCCCCHHHHHHHH
Confidence                            33999998666666655543    469999999999998753210   0    00011111111


Q ss_pred             cCCCCCCCCCchhhhhhhhh
Q 025755          213 KGFFFTTPSHSYMLERTLVL  232 (248)
Q Consensus       213 ~~~~l~~~~~~~~~g~~l~v  232 (248)
                      .  ++.++.+.|+||+.|.+
T Consensus       229 ~--~l~s~~~~~itG~~i~~  246 (247)
T 3i1j_A          229 L--YLMGPDSTGINGQALNA  246 (247)
T ss_dssp             H--HHHSGGGTTCCSCEEEC
T ss_pred             H--HHhCchhccccCeeecC
Confidence            1  66777788999998865

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.96  E-value=1.9e-30  Score=208.81  Aligned_cols=203  Identities=17%  Similarity=0.110  Sum_probs=151.0

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-------
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-------   76 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-------   76 (248)
                      |++|+++||||+||||++++++|+++|++|++++|+.....           ....++.+|++|.++++++++       
T Consensus         1 m~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~-----------~~~~~~~~D~~~~~~~~~~~~~~~~~~~   69 (236)
T 1ooe_A            1 MSSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA-----------DSNILVDGNKNWTEQEQSILEQTASSLQ   69 (236)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS-----------SEEEECCTTSCHHHHHHHHHHHHHHHHT
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc-----------cccEEEeCCCCCHHHHHHHHHHHHHHhC
Confidence            46799999999999999999999999999999999864211           235677899999998887765       


Q ss_pred             --CCCEEEEccccCCCCCC-----CCccccchhhhHHHHHHHHHHHHhc--CCCEEEEEeccceeccCCCCCCCCccCCC
Q 025755           77 --GCTGVFHVACPVPVGKV-----PNPEVQLIDPAVVGTKNVLNSCVKA--KVKRVVVVSSIGAVMLNPNWPKGQVMDEE  147 (248)
Q Consensus        77 --~id~vi~~ag~~~~~~~-----~~~~~~~~~~n~~g~~~~~~~~~~~--~~~~iV~vSS~~~~~~~~~~~~~~~~~e~  147 (248)
                        ++|+||||||.......     .+.+...+++|+.++.++++++.+.  +.++||++||..++.+.+.          
T Consensus        70 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~----------  139 (236)
T 1ooe_A           70 GSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPTPS----------  139 (236)
T ss_dssp             TCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTT----------
T ss_pred             CCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchhhccCCCC----------
Confidence              78999999997653221     2345678999999999999998875  3469999999877655432          


Q ss_pred             CCCchhhhccccchHHHHHHHHHHHHHHHHHhC-----CccEEEEccCeeecCCCCC---C----CCccHHHHHHHHcCC
Q 025755          148 CWSDEEFCKATENYYCLAKTIAEIQALEYAKRG-----ELDIVTVCPSIVIGPMLQP---T----INTSSLLLLGFLKGF  215 (248)
Q Consensus       148 ~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~-----~i~v~~vrpg~i~g~~~~~---~----~~~~~~~~~~~~~~~  215 (248)
                                 ...|+.||++.+.+.+.++.+.     ++++++|+||++++|+...   .    ....+..+..... .
T Consensus       140 -----------~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~dvA~~i~-~  207 (236)
T 1ooe_A          140 -----------MIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKWMPNADHSSWTPLSFISEHLL-K  207 (236)
T ss_dssp             -----------BHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHHHSTTCCGGGCBCHHHHHHHHH-H
T ss_pred             -----------cHHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEecCcccCcchhhcCCCccccccCCHHHHHHHHH-H
Confidence                       2349999998888888887654     4999999999999985321   0    0011221211111 0


Q ss_pred             CCCCCCCchhhhhhhhhccceeEE
Q 025755          216 FFTTPSHSYMLERTLVLNQGVRLY  239 (248)
Q Consensus       216 ~l~~~~~~~~~g~~l~vd~g~~~~  239 (248)
                      ++.++...+++|+.+.+|||..-+
T Consensus       208 ~l~s~~~~~~~G~~~~v~gg~~~~  231 (236)
T 1ooe_A          208 WTTETSSRPSSGALLKITTENGTS  231 (236)
T ss_dssp             HHHCGGGCCCTTCEEEEEEETTEE
T ss_pred             HHcCCCcccccccEEEEecCCCcc
Confidence            344566789999999999996543

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=99.96  E-value=4.4e-30  Score=234.89  Aligned_cols=228  Identities=15%  Similarity=0.180  Sum_probs=166.8

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHC-CCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHH-HHHHhCCCCEE
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLK-GYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEA-LCAATAGCTGV   81 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~-~~~~~~~id~v   81 (248)
                      +++|+|+||||+||||++++++|+++ |++|++++|+..... .    +. ...++.++.+|++|.++ +.++++++|+|
T Consensus       313 ~~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~-~----~~-~~~~v~~v~~Dl~d~~~~~~~~~~~~D~V  386 (660)
T 1z7e_A          313 RRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAIS-R----FL-NHPHFHFVEGDISIHSEWIEYHVKKCDVV  386 (660)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTG-G----GT-TCTTEEEEECCTTTCHHHHHHHHHHCSEE
T ss_pred             ccCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhh-h----hc-cCCceEEEECCCCCcHHHHHHhhcCCCEE
Confidence            46789999999999999999999998 899999999864321 1    11 13578999999999765 77788899999


Q ss_pred             EEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCchh-hhccccc
Q 025755           82 FHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEE-FCKATEN  160 (248)
Q Consensus        82 i~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~-~~~~~~~  160 (248)
                      ||+||..........+..++++|+.++.++++++.+.+ ++|||+||... ++...   ..+++|+++.... ....+.+
T Consensus       387 ih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~-~r~V~~SS~~v-yg~~~---~~~~~E~~~~~~~~p~~~p~~  461 (660)
T 1z7e_A          387 LPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR-KRIIFPSTSEV-YGMCS---DKYFDEDHSNLIVGPVNKPRW  461 (660)
T ss_dssp             EECCCCCCTHHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CEEEEECCGGG-GBTCC---SSSBCTTTCCEEECCTTCTTH
T ss_pred             EECceecCccccccCHHHHHHhhhHHHHHHHHHHHHhC-CEEEEEecHHH-cCCCC---CcccCCCccccccCcccCCCC
Confidence            99999765322223446788999999999999999988 89999999664 44322   4567777653211 1124456


Q ss_pred             hHHHHHHHHHHHHHHHHHhCCccEEEEccCeeecCCCCC-------CCCccHHHHHHHHcCCCCCCCCCchhhhhhhhhc
Q 025755          161 YYCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQP-------TINTSSLLLLGFLKGFFFTTPSHSYMLERTLVLN  233 (248)
Q Consensus       161 ~Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~-------~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~l~vd  233 (248)
                      .|+.||..+|.++..++.+++++++++|||++|||....       .......++..+..+..+....++....+.++++
T Consensus       462 ~Y~~sK~~~E~~~~~~~~~~gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~  541 (660)
T 1z7e_A          462 IYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIR  541 (660)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHHHHHHTCCEEEEGGGCCEEECEEHH
T ss_pred             CcHHHHHHHHHHHHHHHHHcCCCEEEECCCcccCCCccccccccccccchHHHHHHHHHcCCCcEEeCCCCeEEEEEEHH
Confidence            799999999999999987778999999999999998643       1234556677777776543333333334456666


Q ss_pred             cceeEEEee
Q 025755          234 QGVRLYRCK  242 (248)
Q Consensus       234 ~g~~~~~~~  242 (248)
                      +...++..+
T Consensus       542 Dva~ai~~~  550 (660)
T 1z7e_A          542 DGIEALYRI  550 (660)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            655544433

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=99.96  E-value=2.7e-29  Score=210.69  Aligned_cols=176  Identities=19%  Similarity=0.143  Sum_probs=134.2

Q ss_pred             CCCCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCC--CCCeEEEEccCCCHHHHHHHhC--
Q 025755            1 MSGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGA--SENLQLFKTDLLDYEALCAATA--   76 (248)
Q Consensus         1 m~~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Di~d~~~~~~~~~--   76 (248)
                      |+++++|++|||||+||||+++++.|+++|++|++++|+.... ....+.+...  ..++.++.+|++|.++++++++  
T Consensus         3 m~~l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~-~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   81 (319)
T 3ioy_A            3 LKDFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSI-DKALATLEAEGSGPEVMGVQLDVASREGFKMAADEV   81 (319)
T ss_dssp             CCCCTTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHH-HHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHH
Confidence            4567899999999999999999999999999999999987432 2222223222  2378999999999999888875  


Q ss_pred             -----CCCEEEEccccCCCCC----CCCccccchhhhHHHHHHHHHHHHhc----------CCCEEEEEeccceeccCCC
Q 025755           77 -----GCTGVFHVACPVPVGK----VPNPEVQLIDPAVVGTKNVLNSCVKA----------KVKRVVVVSSIGAVMLNPN  137 (248)
Q Consensus        77 -----~id~vi~~ag~~~~~~----~~~~~~~~~~~n~~g~~~~~~~~~~~----------~~~~iV~vSS~~~~~~~~~  137 (248)
                           .+|+||||||+.....    ..+.+..++++|+.|+.++++++.+.          +.++||++||..++.+.+.
T Consensus        82 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~~~~  161 (319)
T 3ioy_A           82 EARFGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAGS  161 (319)
T ss_dssp             HHHTCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCCCSS
T ss_pred             HHhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccCCCC
Confidence                 5799999999765432    12445678999999999998887653          3578999999887776544


Q ss_pred             CCCCCccCCCCCCchhhhccccchHHHHHH----HHHHHHHHHHHhCCccEEEEccCeeecCCCCC
Q 025755          138 WPKGQVMDEECWSDEEFCKATENYYCLAKT----IAEIQALEYAKRGELDIVTVCPSIVIGPMLQP  199 (248)
Q Consensus       138 ~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~----~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~  199 (248)
                      .                     ..|+.||+    +++.++.++.+. |+++++|+||.|.|++...
T Consensus       162 ~---------------------~~Y~aSKaal~~~~~~la~e~~~~-gi~v~~v~PG~v~T~~~~~  205 (319)
T 3ioy_A          162 P---------------------GIYNTTKFAVRGLSESLHYSLLKY-EIGVSVLCPGLVKSYIYAS  205 (319)
T ss_dssp             S---------------------HHHHHHHHHHHHHHHHHHHHHGGG-TCEEEEECCCCBC------
T ss_pred             C---------------------HHHHHHHHHHHHHHHHHHHHhhhc-CCEEEEEEcCeEccCcccc
Confidence            2                     33999998    777777777765 5999999999999987653

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=99.96  E-value=2.8e-29  Score=209.02  Aligned_cols=174  Identities=18%  Similarity=0.168  Sum_probs=135.7

Q ss_pred             CCCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-----
Q 025755            2 SGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-----   76 (248)
Q Consensus         2 ~~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-----   76 (248)
                      .++++|++|||||+||||++++++|+++|++|++++|+... .....+.+.....++.++.+|++|.++++++++     
T Consensus        27 ~~l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~-~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  105 (301)
T 3tjr_A           27 SGFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPA-LEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRL  105 (301)
T ss_dssp             CCSTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHH-HHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             hccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHH-HHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHh
Confidence            34788999999999999999999999999999999998643 233334444445689999999999999988876     


Q ss_pred             --CCCEEEEccccCCCCC----CCCccccchhhhHHHHHHHHHHHHhc----C-CCEEEEEeccceeccCCCCCCCCccC
Q 025755           77 --GCTGVFHVACPVPVGK----VPNPEVQLIDPAVVGTKNVLNSCVKA----K-VKRVVVVSSIGAVMLNPNWPKGQVMD  145 (248)
Q Consensus        77 --~id~vi~~ag~~~~~~----~~~~~~~~~~~n~~g~~~~~~~~~~~----~-~~~iV~vSS~~~~~~~~~~~~~~~~~  145 (248)
                        ++|+||||||......    ..+.+...+++|+.|+.++++++.+.    + .++||++||..++.+.+..       
T Consensus       106 ~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-------  178 (301)
T 3tjr_A          106 LGGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPNAGL-------  178 (301)
T ss_dssp             HSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCTTB-------
T ss_pred             CCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCCc-------
Confidence              6899999999865432    22445678999999999999887543    4 5799999998877665432       


Q ss_pred             CCCCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCC
Q 025755          146 EECWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPML  197 (248)
Q Consensus       146 e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~  197 (248)
                                    ..|+.||++.+.+.+.++.+   .|++|++|+||.+.+++.
T Consensus       179 --------------~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~  219 (301)
T 3tjr_A          179 --------------GTYGVAKYGVVGLAETLAREVKPNGIGVSVLCPMVVETKLV  219 (301)
T ss_dssp             --------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEECCSCCCSSHH
T ss_pred             --------------hHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCccccccc
Confidence                          34999997555554444432   259999999999999864

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=99.96  E-value=6.4e-30  Score=213.92  Aligned_cols=215  Identities=17%  Similarity=0.173  Sum_probs=155.7

Q ss_pred             EEEEEcCccHHHHHHHHHHHHC--CCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC--CCCEEEE
Q 025755            8 RVCVTGAGGYIASWLVKYLLLK--GYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA--GCTGVFH   83 (248)
Q Consensus         8 ~vlVtG~~g~iG~~~~~~l~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~--~id~vi~   83 (248)
                      +||||||+||||++++++|+++  |++|++++|+....            .++.++.+|++|.+++.++++  ++|+|||
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~------------~~~~~~~~D~~d~~~~~~~~~~~~~d~vih   68 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDT------------GGIKFITLDVSNRDEIDRAVEKYSIDAIFH   68 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCC------------TTCCEEECCTTCHHHHHHHHHHTTCCEEEE
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCccc------------cCceEEEecCCCHHHHHHHHhhcCCcEEEE
Confidence            5899999999999999999998  89999999875421            145788999999999999998  8999999


Q ss_pred             ccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccccchHH
Q 025755           84 VACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYC  163 (248)
Q Consensus        84 ~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~  163 (248)
                      +|+..... ....+...+++|+.++.++++++++.+.++||++||...+....   ...+.+|+.+..      |.+.|+
T Consensus        69 ~a~~~~~~-~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~---~~~~~~e~~~~~------p~~~Y~  138 (317)
T 3ajr_A           69 LAGILSAK-GEKDPALAYKVNMNGTYNILEAAKQHRVEKVVIPSTIGVFGPET---PKNKVPSITITR------PRTMFG  138 (317)
T ss_dssp             CCCCCHHH-HHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCTTS---CSSSBCSSSCCC------CCSHHH
T ss_pred             CCcccCCc-cccChHHHhhhhhHHHHHHHHHHHHcCCCEEEEecCHHHhCCCC---CCCCccccccCC------CCchHH
Confidence            99975321 12334678999999999999999999989999999976543321   123455655443      356699


Q ss_pred             HHHHHHHHHHHHHHHhCCccEEEEccCeeecCCCCCCC---CccHHHHHHHHcCCCCCCCCCchhhhhhhhhccceeEEE
Q 025755          164 LAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTI---NTSSLLLLGFLKGFFFTTPSHSYMLERTLVLNQGVRLYR  240 (248)
Q Consensus       164 ~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~---~~~~~~~~~~~~~~~l~~~~~~~~~g~~l~vd~g~~~~~  240 (248)
                      .+|..+|.++..++.+++++++++||+.+||+...+..   ......+.+...+..+.....+....+.+++++...++.
T Consensus       139 ~sK~~~e~~~~~~~~~~~~~~~~lR~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~  218 (317)
T 3ajr_A          139 VTKIAAELLGQYYYEKFGLDVRSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPMMYMPDALKALV  218 (317)
T ss_dssp             HHHHHHHHHHHHHHHHHCCEEEEEEECEEECSSSCCCSCSSTHHHHHHHHHHTTCCEEECSCTTCCEEEEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcCCeEEEEecCcEeccCCCCCCcchhHHHHHHHHHHhCCCceeecCccceeeeeEHHHHHHHHH
Confidence            99999999999998777899999999999998654321   112223333333332222222223345677777666554


Q ss_pred             eecc
Q 025755          241 CKIQ  244 (248)
Q Consensus       241 ~~~~  244 (248)
                      .++.
T Consensus       219 ~~l~  222 (317)
T 3ajr_A          219 DLYE  222 (317)
T ss_dssp             HHHH
T ss_pred             HHHh
Confidence            4443

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=99.96  E-value=6e-30  Score=223.72  Aligned_cols=207  Identities=17%  Similarity=0.114  Sum_probs=151.9

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchh-hHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC------
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEK-NAHLKKLEGASENLQLFKTDLLDYEALCAATA------   76 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~------   76 (248)
                      +++|+++||||+||||+++++.|+++|++|++++|+..... ....+.     ..+.++.+|++|.++++++++      
T Consensus       211 l~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~~~l~~~~~~-----~~~~~~~~Dvtd~~~v~~~~~~~~~~~  285 (454)
T 3u0b_A          211 LDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADK-----VGGTALTLDVTADDAVDKITAHVTEHH  285 (454)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHH-----HTCEEEECCTTSTTHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHH-----cCCeEEEEecCCHHHHHHHHHHHHHHc
Confidence            57899999999999999999999999999999998753211 111111     135789999999999888765      


Q ss_pred             --CCCEEEEccccCCCCC----CCCccccchhhhHHHHHHHHHHHHhc----CCCEEEEEeccceeccCCCCCCCCccCC
Q 025755           77 --GCTGVFHVACPVPVGK----VPNPEVQLIDPAVVGTKNVLNSCVKA----KVKRVVVVSSIGAVMLNPNWPKGQVMDE  146 (248)
Q Consensus        77 --~id~vi~~ag~~~~~~----~~~~~~~~~~~n~~g~~~~~~~~~~~----~~~~iV~vSS~~~~~~~~~~~~~~~~~e  146 (248)
                        .+|+||||||+.....    ..+.|..++++|+.|+.++.+++.+.    +.++||++||..++.+.+.+..      
T Consensus       286 g~~id~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~~g~~g~~~------  359 (454)
T 3u0b_A          286 GGKVDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGNRGQTN------  359 (454)
T ss_dssp             TTCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHHHCCTTCHH------
T ss_pred             CCCceEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhCCCCCCCHH------
Confidence              3999999999876442    12445678999999999999999876    6689999999888877654333      


Q ss_pred             CCCCchhhhccccchHHHHHH----HHHHHHHHHHHhCCccEEEEccCeeecCCCCCCCCccHHHHHHHHc-C-------
Q 025755          147 ECWSDEEFCKATENYYCLAKT----IAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLK-G-------  214 (248)
Q Consensus       147 ~~~~~~~~~~~~~~~Y~~sK~----~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~-~-------  214 (248)
                                     |+.||+    +++.++.++.++ |+++|+|+||.+.+++................. +       
T Consensus       360 ---------------YaasKaal~~l~~~la~e~~~~-gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~l~r~g~ped  423 (454)
T 3u0b_A          360 ---------------YATTKAGMIGLAEALAPVLADK-GITINAVAPGFIETKMTEAIPLATREVGRRLNSLFQGGQPVD  423 (454)
T ss_dssp             ---------------HHHHHHHHHHHHHHHHHHHHTT-TCEEEEEEECSBCC----------CHHHHHSBTTSSCBCHHH
T ss_pred             ---------------HHHHHHHHHHHHHHHHHHhhhc-CcEEEEEEcCcccChhhhhcchhhHHHHHhhccccCCCCHHH
Confidence                           999998    666666666554 599999999999999765321111111111100 0       


Q ss_pred             -----CCCCCCCCchhhhhhhhhcccee
Q 025755          215 -----FFFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       215 -----~~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                           .|+.++.+.|+||+++.||||..
T Consensus       424 vA~~v~fL~s~~a~~itG~~i~vdGG~~  451 (454)
T 3u0b_A          424 VAELIAYFASPASNAVTGNTIRVCGQAM  451 (454)
T ss_dssp             HHHHHHHHHCGGGTTCCSCEEEESSSBS
T ss_pred             HHHHHHHHhCCccCCCCCcEEEECCccc
Confidence                 17788888999999999999975

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=99.96  E-value=2.2e-29  Score=206.74  Aligned_cols=209  Identities=12%  Similarity=0.070  Sum_probs=147.0

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCC------
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAG------   77 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~------   77 (248)
                      |+ |+++||||+||||+++++.|+++|++|++++|+... .....+.+... .++.++.+|++|.++++++++.      
T Consensus        20 ~~-k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~-~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   96 (272)
T 2nwq_A           20 MS-STLFITGATSGFGEACARRFAEAGWSLVLTGRREER-LQALAGELSAK-TRVLPLTLDVRDRAAMSAAVDNLPEEFA   96 (272)
T ss_dssp             -C-CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHH-HHHHHHHHTTT-SCEEEEECCTTCHHHHHHHHHTCCGGGS
T ss_pred             cC-cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHH-HHHHHHHhhcC-CcEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            55 899999999999999999999999999999998632 22222333222 5789999999999999998864      


Q ss_pred             -CCEEEEccccCCC-CC----CCCccccchhhhHHHHHHHHHHHH----hcCCC-EEEEEeccceeccCCCCCCCCccCC
Q 025755           78 -CTGVFHVACPVPV-GK----VPNPEVQLIDPAVVGTKNVLNSCV----KAKVK-RVVVVSSIGAVMLNPNWPKGQVMDE  146 (248)
Q Consensus        78 -id~vi~~ag~~~~-~~----~~~~~~~~~~~n~~g~~~~~~~~~----~~~~~-~iV~vSS~~~~~~~~~~~~~~~~~e  146 (248)
                       +|+||||||.... ..    ..+.+...+++|+.|+.++++++.    +.+.+ +||++||..+..+.+..        
T Consensus        97 ~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS~~~~~~~~~~--------  168 (272)
T 2nwq_A           97 TLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWPYPGS--------  168 (272)
T ss_dssp             SCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGTSCCTTC--------
T ss_pred             CCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchhccCCCCC--------
Confidence             5999999997642 21    124456789999999887777665    44667 99999998766554322        


Q ss_pred             CCCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCCC---------------ccHHHH
Q 025755          147 ECWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTIN---------------TSSLLL  208 (248)
Q Consensus       147 ~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~~---------------~~~~~~  208 (248)
                                   ..|+.||++.+.+.+.++.+   .|++||+|+||.+.+++......               ..+.-+
T Consensus       169 -------------~~Y~asKaa~~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~pedv  235 (272)
T 2nwq_A          169 -------------HVYGGTKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEFSLVRFGGDQARYDKTYAGAHPIQPEDI  235 (272)
T ss_dssp             -------------HHHHHHHHHHHHHHHHHHTTCTTSCCEEEEEEECSBC--------------------CCCCBCHHHH
T ss_pred             -------------chHHHHHHHHHHHHHHHHHHhCccCeEEEEEEcCCCcCcchhcccccchHHHHHhhccCCCCCHHHH
Confidence                         33999999888888887754   36999999999999987432100               001111


Q ss_pred             HHHHcCCCCCCCCCchhhhhhhhhccceeEE
Q 025755          209 LGFLKGFFFTTPSHSYMLERTLVLNQGVRLY  239 (248)
Q Consensus       209 ~~~~~~~~l~~~~~~~~~g~~l~vd~g~~~~  239 (248)
                      .....  ++.++ ..+++|+.+.+|+|...+
T Consensus       236 A~~v~--~l~s~-~~~~~g~~i~v~~~~~~~  263 (272)
T 2nwq_A          236 AETIF--WIMNQ-PAHLNINSLEIMPVSQSW  263 (272)
T ss_dssp             HHHHH--HHHTS-CTTEEEEEEEEEETTEEE
T ss_pred             HHHHH--HHhCC-CccCccceEEEeeccCcC
Confidence            11110  44443 578999999999996543

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=99.96  E-value=4.5e-30  Score=207.22  Aligned_cols=201  Identities=15%  Similarity=0.045  Sum_probs=151.3

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-------
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-------   76 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-------   76 (248)
                      .++|+++||||+||||++++++|+++|++|++++|+.....           ....++.+|++|.++++++++       
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~-----------~~~~~~~~D~~~~~~v~~~~~~~~~~~~   73 (241)
T 1dhr_A            5 GEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA-----------SASVIVKMTDSFTEQADQVTAEVGKLLG   73 (241)
T ss_dssp             -CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS-----------SEEEECCCCSCHHHHHHHHHHHHHHHHT
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc-----------CCcEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            56899999999999999999999999999999999864211           135677899999998888765       


Q ss_pred             --CCCEEEEccccCCCCCC-----CCccccchhhhHHHHHHHHHHHHhc--CCCEEEEEeccceeccCCCCCCCCccCCC
Q 025755           77 --GCTGVFHVACPVPVGKV-----PNPEVQLIDPAVVGTKNVLNSCVKA--KVKRVVVVSSIGAVMLNPNWPKGQVMDEE  147 (248)
Q Consensus        77 --~id~vi~~ag~~~~~~~-----~~~~~~~~~~n~~g~~~~~~~~~~~--~~~~iV~vSS~~~~~~~~~~~~~~~~~e~  147 (248)
                        ++|+||||||.......     .+.+...+++|+.++.++++++.+.  +.++||++||..++.+.+.          
T Consensus        74 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~----------  143 (241)
T 1dhr_A           74 DQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGTPG----------  143 (241)
T ss_dssp             TCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTT----------
T ss_pred             CCCCCEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHHHccCCCC----------
Confidence              68999999997653221     2345678899999999999999775  2379999999877655432          


Q ss_pred             CCCchhhhccccchHHHHHHHHHHHHHHHHHh-----CCccEEEEccCeeecCCCCC---CC----CccHHHHHHHHcCC
Q 025755          148 CWSDEEFCKATENYYCLAKTIAEIQALEYAKR-----GELDIVTVCPSIVIGPMLQP---TI----NTSSLLLLGFLKGF  215 (248)
Q Consensus       148 ~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~-----~~i~v~~vrpg~i~g~~~~~---~~----~~~~~~~~~~~~~~  215 (248)
                                 ...|+.||+..+.+.+.++.+     .+++|++|+||.+.+++...   ..    ...+..+.....  
T Consensus       144 -----------~~~Y~asK~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~vA~~v~--  210 (241)
T 1dhr_A          144 -----------MIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKSMPEADFSSWTPLEFLVETFH--  210 (241)
T ss_dssp             -----------BHHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHHHSTTSCGGGSEEHHHHHHHHH--
T ss_pred             -----------chHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEecCcccCccccccCcchhhccCCCHHHHHHHHH--
Confidence                       234999999888888887754     35999999999999975321   00    111222222221  


Q ss_pred             CCCCCCCchhhhhhhhhccceeE
Q 025755          216 FFTTPSHSYMLERTLVLNQGVRL  238 (248)
Q Consensus       216 ~l~~~~~~~~~g~~l~vd~g~~~  238 (248)
                      ++..+...+++|+.+.+|||..-
T Consensus       211 ~l~~~~~~~~~G~~~~v~g~~~~  233 (241)
T 1dhr_A          211 DWITGNKRPNSGSLIQVVTTDGK  233 (241)
T ss_dssp             HHHTTTTCCCTTCEEEEEEETTE
T ss_pred             HHhcCCCcCccceEEEEeCCCCc
Confidence            45567788999999999998653

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.96  E-value=1e-29  Score=204.81  Aligned_cols=195  Identities=19%  Similarity=0.137  Sum_probs=144.8

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC------CC
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA------GC   78 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~------~i   78 (248)
                      ++|+++||||+||||++++++|+++|++|++++|+..             ..++.++.+|++|.++++++++      ++
T Consensus         1 ~~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-------------~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   67 (242)
T 1uay_A            1 MERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-------------GEDLIYVEGDVTREEDVRRAVARAQEEAPL   67 (242)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-------------SSSSEEEECCTTCHHHHHHHHHHHHHHSCE
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-------------ccceEEEeCCCCCHHHHHHHHHHHHhhCCc
Confidence            3689999999999999999999999999999999863             1245889999999999999887      78


Q ss_pred             CEEEEccccCCCCCCC----C----ccccchhhhHHHHHHHHHHHHhc----C---C---CEEEEEeccceeccCCCCCC
Q 025755           79 TGVFHVACPVPVGKVP----N----PEVQLIDPAVVGTKNVLNSCVKA----K---V---KRVVVVSSIGAVMLNPNWPK  140 (248)
Q Consensus        79 d~vi~~ag~~~~~~~~----~----~~~~~~~~n~~g~~~~~~~~~~~----~---~---~~iV~vSS~~~~~~~~~~~~  140 (248)
                      |+||||||........    +    .+...+++|+.++.++++++.+.    +   .   ++||++||..++.+.+.   
T Consensus        68 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~---  144 (242)
T 1uay_A           68 FAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIG---  144 (242)
T ss_dssp             EEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTT---
T ss_pred             eEEEEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCC---
Confidence            9999999976543221    1    45678899999999999998764    1   1   39999999877665432   


Q ss_pred             CCccCCCCCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCCCccHHHHHHHHcC---
Q 025755          141 GQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKG---  214 (248)
Q Consensus       141 ~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~~---  214 (248)
                                        ...|+.||++.+.+.+.++.+   .++++++++||.++|++....   ...+...+...   
T Consensus       145 ------------------~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~---~~~~~~~~~~~~~~  203 (242)
T 1uay_A          145 ------------------QAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGL---PEKAKASLAAQVPF  203 (242)
T ss_dssp             ------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTS---CHHHHHHHHTTCCS
T ss_pred             ------------------CchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhhcc---chhHHHHHHhhCCC
Confidence                              234999998666666655543   269999999999999864321   11111222111   


Q ss_pred             --C------------CCCCCCCchhhhhhhhhccceeE
Q 025755          215 --F------------FFTTPSHSYMLERTLVLNQGVRL  238 (248)
Q Consensus       215 --~------------~l~~~~~~~~~g~~l~vd~g~~~  238 (248)
                        +            ++...  .+++|+.+.+|||+.+
T Consensus       204 ~~~~~~~~dva~~~~~l~~~--~~~~G~~~~v~gG~~~  239 (242)
T 1uay_A          204 PPRLGRPEEYAALVLHILEN--PMLNGEVVRLDGALRM  239 (242)
T ss_dssp             SCSCCCHHHHHHHHHHHHHC--TTCCSCEEEESTTCCC
T ss_pred             cccCCCHHHHHHHHHHHhcC--CCCCCcEEEEcCCeec
Confidence              1            22222  6889999999999763

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.96  E-value=3.4e-28  Score=214.58  Aligned_cols=186  Identities=20%  Similarity=0.184  Sum_probs=148.2

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHC---CCeEEEEEcCCCchh-hHHhhhhcC-------------CCCCeEEEEccCC
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLK---GYMVHGTVRDPCDEK-NAHLKKLEG-------------ASENLQLFKTDLL   66 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~---g~~V~~~~r~~~~~~-~~~~~~~~~-------------~~~~~~~~~~Di~   66 (248)
                      .++|+|+||||+|+||++++++|+++   |++|++++|+..... ...+.....             ...++.++.+|++
T Consensus        71 ~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~  150 (478)
T 4dqv_A           71 PELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGDKS  150 (478)
T ss_dssp             SCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECCTT
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeECC
Confidence            56899999999999999999999999   899999999875321 111111111             1358999999998


Q ss_pred             ------CHHHHHHHhCCCCEEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCC
Q 025755           67 ------DYEALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPK  140 (248)
Q Consensus        67 ------d~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~  140 (248)
                            |.+.+.++++++|+||||||....    .++...+++|+.++.+++++|.+.+.++|||+||.. +++...   
T Consensus       151 ~~~~gld~~~~~~~~~~~D~Vih~Aa~~~~----~~~~~~~~~Nv~gt~~ll~aa~~~~~~~~V~iSS~~-v~~~~~---  222 (478)
T 4dqv_A          151 EPDLGLDQPMWRRLAETVDLIVDSAAMVNA----FPYHELFGPNVAGTAELIRIALTTKLKPFTYVSTAD-VGAAIE---  222 (478)
T ss_dssp             SGGGGCCHHHHHHHHHHCCEEEECCSSCSB----SSCCEEHHHHHHHHHHHHHHHTSSSCCCEEEEEEGG-GGTTSC---
T ss_pred             CcccCCCHHHHHHHHcCCCEEEECccccCC----cCHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeehh-hcCccC---
Confidence                  777899999999999999998754    455788999999999999999999989999999965 454432   


Q ss_pred             CCccCCCCCCchhhh-----ccccchHHHHHHHHHHHHHHHHHhCCccEEEEccCeeecCCC
Q 025755          141 GQVMDEECWSDEEFC-----KATENYYCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPML  197 (248)
Q Consensus       141 ~~~~~e~~~~~~~~~-----~~~~~~Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~  197 (248)
                      ..+++|+.+..+...     ....+.|+.||..+|.++++++.+.+++++++|||+|||+..
T Consensus       223 ~~~~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ivRpg~v~G~~~  284 (478)
T 4dqv_A          223 PSAFTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLCALPVAVFRCGMILADTS  284 (478)
T ss_dssp             TTTCCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECCSS
T ss_pred             CCCcCCcccccccCcccccccccccchHHHHHHHHHHHHHHHHHhCCCeEEEECceeeCCCc
Confidence            456777766544322     122356999999999999999987679999999999999854

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.96  E-value=3.2e-29  Score=203.21  Aligned_cols=202  Identities=16%  Similarity=0.091  Sum_probs=141.3

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCC-CHHHHHHHhCCCCEE
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLL-DYEALCAATAGCTGV   81 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~-d~~~~~~~~~~id~v   81 (248)
                      .+++|+++||||+||||++++++|+++|++|++++|+..     ..+.+    +++.++ +|+. +.+.+.+.+.++|+|
T Consensus        16 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~-----~~~~~----~~~~~~-~D~~~~~~~~~~~~~~iD~l   85 (249)
T 1o5i_A           16 GIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEE-----LLKRS----GHRYVV-CDLRKDLDLLFEKVKEVDIL   85 (249)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHH-----HHHHT----CSEEEE-CCTTTCHHHHHHHSCCCSEE
T ss_pred             ccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHH-----HHHhh----CCeEEE-eeHHHHHHHHHHHhcCCCEE
Confidence            378999999999999999999999999999999999752     12222    256777 9993 233333334489999


Q ss_pred             EEccccCCCCC----CCCccccchhhhHHHHHHHHHH----HHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCchh
Q 025755           82 FHVACPVPVGK----VPNPEVQLIDPAVVGTKNVLNS----CVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEE  153 (248)
Q Consensus        82 i~~ag~~~~~~----~~~~~~~~~~~n~~g~~~~~~~----~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~  153 (248)
                      |||||......    ..+.+...+++|+.++.++.++    +++.+.++||++||..++.+.+.                
T Consensus        86 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~----------------  149 (249)
T 1o5i_A           86 VLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIEN----------------  149 (249)
T ss_dssp             EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT----------------
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchHhcCCCCC----------------
Confidence            99999764321    1234567899999997766555    44557789999999876654432                


Q ss_pred             hhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCCCccHHHHH-HHHc----CC----------
Q 025755          154 FCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTINTSSLLLL-GFLK----GF----------  215 (248)
Q Consensus       154 ~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~-~~~~----~~----------  215 (248)
                           ...|+.||+..+.+.+.++.+   .++++++|+||.++|++......   .... .+..    ++          
T Consensus       150 -----~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~---~~~~~~~~~~~p~~~~~~~~dvA~~  221 (249)
T 1o5i_A          150 -----LYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLS---EEKKKQVESQIPMRRMAKPEEIASV  221 (249)
T ss_dssp             -----BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSC---HHHHHHHHTTSTTSSCBCHHHHHHH
T ss_pred             -----CchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCccCcccccch---hhHHHHHHhcCCCCCCcCHHHHHHH
Confidence                 234999997666655555443   36999999999999997431100   1111 1110    11          


Q ss_pred             --CCCCCCCchhhhhhhhhccceeE
Q 025755          216 --FFTTPSHSYMLERTLVLNQGVRL  238 (248)
Q Consensus       216 --~l~~~~~~~~~g~~l~vd~g~~~  238 (248)
                        ++..+...+++|+++.+|||...
T Consensus       222 i~~l~s~~~~~~tG~~~~vdgG~~~  246 (249)
T 1o5i_A          222 VAFLCSEKASYLTGQTIVVDGGLSK  246 (249)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTCCC
T ss_pred             HHHHcCccccCCCCCEEEECCCccc
Confidence              55566678999999999999753

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=99.96  E-value=5.1e-29  Score=204.54  Aligned_cols=174  Identities=18%  Similarity=0.101  Sum_probs=127.4

Q ss_pred             CCCCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC----
Q 025755            1 MSGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA----   76 (248)
Q Consensus         1 m~~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~----   76 (248)
                      |..+++|++|||||+||||++++++|+++|++|++++|+.+. .....+.+   ..++.++.+|++|.++++++++    
T Consensus        23 m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~-~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~   98 (272)
T 4dyv_A           23 MSKTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDA-LQETAAEI---GDDALCVPTDVTDPDSVRALFTATVE   98 (272)
T ss_dssp             -----CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHH-HHHHHHHH---TSCCEEEECCTTSHHHHHHHHHHHHH
T ss_pred             hcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHH-HHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHH
Confidence            445678999999999999999999999999999999998642 22222222   3578999999999999988876    


Q ss_pred             ---CCCEEEEccccCCCC-----CCCCccccchhhhHHHHHHHHHHHHhc----C--CCEEEEEeccceeccCCCCCCCC
Q 025755           77 ---GCTGVFHVACPVPVG-----KVPNPEVQLIDPAVVGTKNVLNSCVKA----K--VKRVVVVSSIGAVMLNPNWPKGQ  142 (248)
Q Consensus        77 ---~id~vi~~ag~~~~~-----~~~~~~~~~~~~n~~g~~~~~~~~~~~----~--~~~iV~vSS~~~~~~~~~~~~~~  142 (248)
                         ++|+||||||.....     ...+.|+..+++|+.|+.++++++.+.    +  .++||++||..++.+.+..    
T Consensus        99 ~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~----  174 (272)
T 4dyv_A           99 KFGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSPRPYS----  174 (272)
T ss_dssp             HHSCCCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTSCCTTC----
T ss_pred             HcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcCCCCCc----
Confidence               799999999986432     123445778999999988888877543    3  5799999998877665432    


Q ss_pred             ccCCCCCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCC
Q 025755          143 VMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQP  199 (248)
Q Consensus       143 ~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~  199 (248)
                                       ..|+.||++.+.+.+.++.+   .++++++|+||.+.+|+...
T Consensus       175 -----------------~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~  217 (272)
T 4dyv_A          175 -----------------APYTATKHAITGLTKSTSLDGRVHDIACGQIDIGNADTPMAQK  217 (272)
T ss_dssp             -----------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEEECC------
T ss_pred             -----------------hHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEECcccChhhhh
Confidence                             33999997666555555443   35999999999999987543

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=99.96  E-value=8.4e-29  Score=199.07  Aligned_cols=170  Identities=21%  Similarity=0.114  Sum_probs=130.0

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-------
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-------   76 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-------   76 (248)
                      |++|+++||||+||||++++++|+++|++|++++|+.+.. ....+.+   ..++.++.+|++|.++++++++       
T Consensus         1 Ms~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~-~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   76 (235)
T 3l6e_A            1 MSLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRL-QQQELLL---GNAVIGIVADLAHHEDVDVAFAAAVEWGG   76 (235)
T ss_dssp             --CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHHH---GGGEEEEECCTTSHHHHHHHHHHHHHHHC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHH-HHHHHHh---cCCceEEECCCCCHHHHHHHHHHHHHhcC
Confidence            3578999999999999999999999999999999986432 2222223   2358999999999999888775       


Q ss_pred             CCCEEEEccccCCCCC----CCCccccchhhhHHHHHHHHHHHHhc---CCCEEEEEeccceeccCCCCCCCCccCCCCC
Q 025755           77 GCTGVFHVACPVPVGK----VPNPEVQLIDPAVVGTKNVLNSCVKA---KVKRVVVVSSIGAVMLNPNWPKGQVMDEECW  149 (248)
Q Consensus        77 ~id~vi~~ag~~~~~~----~~~~~~~~~~~n~~g~~~~~~~~~~~---~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~  149 (248)
                      ++|+||||||......    ..+.|...+++|+.|+.++++++.+.   ..++||++||..+..+.+..           
T Consensus        77 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~~~~~-----------  145 (235)
T 3l6e_A           77 LPELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERGGVLANVLSSAAQVGKANE-----------  145 (235)
T ss_dssp             SCSEEEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCEECCSSCSSH-----------
T ss_pred             CCcEEEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHHhcCCCCCC-----------
Confidence            5899999999865432    23445778999999999988888653   23499999998877665432           


Q ss_pred             CchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCC
Q 025755          150 SDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQ  198 (248)
Q Consensus       150 ~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~  198 (248)
                                ..|+.||++.+.+.+.++.+   .|+++++|+||.+.+++..
T Consensus       146 ----------~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~  187 (235)
T 3l6e_A          146 ----------SLYCASKWGMRGFLESLRAELKDSPLRLVNLYPSGIRSEFWD  187 (235)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEEECCCC--
T ss_pred             ----------cHHHHHHHHHHHHHHHHHHHhhccCCEEEEEeCCCccCcchh
Confidence                      34999998777777766654   3699999999999998754

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=99.96  E-value=9.6e-30  Score=210.05  Aligned_cols=198  Identities=15%  Similarity=0.059  Sum_probs=155.8

Q ss_pred             Cc-EEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC--CCCEEE
Q 025755            6 KE-RVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA--GCTGVF   82 (248)
Q Consensus         6 ~k-~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~--~id~vi   82 (248)
                      || +|+||||+|+||+++++.|+++|++|++++|.                      ++|++|.+++.++++  ++|+||
T Consensus         4 M~m~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~----------------------~~D~~d~~~~~~~~~~~~~d~vi   61 (287)
T 3sc6_A            4 MKERVIITGANGQLGKQLQEELNPEEYDIYPFDKK----------------------LLDITNISQVQQVVQEIRPHIII   61 (287)
T ss_dssp             -CEEEEEESTTSHHHHHHHHHSCTTTEEEEEECTT----------------------TSCTTCHHHHHHHHHHHCCSEEE
T ss_pred             ceeEEEEECCCCHHHHHHHHHHHhCCCEEEEeccc----------------------ccCCCCHHHHHHHHHhcCCCEEE
Confidence            44 99999999999999999999999999999983                      279999999999998  699999


Q ss_pred             EccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccccchH
Q 025755           83 HVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYY  162 (248)
Q Consensus        83 ~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y  162 (248)
                      |+||..........+...+++|+.++.++++++++.+. ++||+||... |+...   ..+++|+++..+      .+.|
T Consensus        62 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~v~~SS~~v-y~~~~---~~~~~E~~~~~p------~~~Y  130 (287)
T 3sc6_A           62 HCAAYTKVDQAEKERDLAYVINAIGARNVAVASQLVGA-KLVYISTDYV-FQGDR---PEGYDEFHNPAP------INIY  130 (287)
T ss_dssp             ECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGG-SCCCC---SSCBCTTSCCCC------CSHH
T ss_pred             ECCcccChHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEchhhh-cCCCC---CCCCCCCCCCCC------CCHH
Confidence            99998764433456688999999999999999999887 7999999764 44322   467888876654      4569


Q ss_pred             HHHHHHHHHHHHHHHHhCCccEEEEccCeeecCCCCCCCCccHHHHHHHHcCCCCCCCCCchhhhhhhhhccceeEEEee
Q 025755          163 CLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKGFFFTTPSHSYMLERTLVLNQGVRLYRCK  242 (248)
Q Consensus       163 ~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~l~vd~g~~~~~~~  242 (248)
                      +.+|..+|.+++.++.    +++++||+.+|||...   .....++.....+..+....+  ...+.+++++...++..+
T Consensus       131 ~~sK~~~E~~~~~~~~----~~~ilR~~~v~G~~~~---~~~~~~~~~~~~~~~~~~~~~--~~~~~i~v~Dva~~~~~~  201 (287)
T 3sc6_A          131 GASKYAGEQFVKELHN----KYFIVRTSWLYGKYGN---NFVKTMIRLGKEREEISVVAD--QIGSPTYVADLNVMINKL  201 (287)
T ss_dssp             HHHHHHHHHHHHHHCS----SEEEEEECSEECSSSC---CHHHHHHHHHTTCSEEEEECS--CEECCEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCC----CcEEEeeeeecCCCCC---cHHHHHHHHHHcCCCeEeecC--cccCceEHHHHHHHHHHH
Confidence            9999999999988753    6799999999999754   355666666666665444433  334567888877666555


Q ss_pred             ccC
Q 025755          243 IQI  245 (248)
Q Consensus       243 ~~~  245 (248)
                      +..
T Consensus       202 ~~~  204 (287)
T 3sc6_A          202 IHT  204 (287)
T ss_dssp             HTS
T ss_pred             HhC
Confidence            544

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=99.96  E-value=8.6e-29  Score=198.32  Aligned_cols=203  Identities=19%  Similarity=0.129  Sum_probs=141.3

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCC----CEE
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGC----TGV   81 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~i----d~v   81 (248)
                      ||+++||||+||||++++++|+++|++|++++|+... .....+.+   ..++.++.+|++|.++++++++++    |+|
T Consensus         1 Mk~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~-~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~d~l   76 (230)
T 3guy_A            1 MSLIVITGASSGLGAELAKLYDAEGKATYLTGRSESK-LSTVTNCL---SNNVGYRARDLASHQEVEQLFEQLDSIPSTV   76 (230)
T ss_dssp             --CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHH-HHHHHHTC---SSCCCEEECCTTCHHHHHHHHHSCSSCCSEE
T ss_pred             CCEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHHH---hhccCeEeecCCCHHHHHHHHHHHhhcCCEE
Confidence            5799999999999999999999999999999998642 22222222   457889999999999999998764    999


Q ss_pred             EEccccCCCCCC----CCccccchhhhHHHHHHHHHHHHhc---CCCEEEEEeccceeccCCCCCCCCccCCCCCCchhh
Q 025755           82 FHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCVKA---KVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEF  154 (248)
Q Consensus        82 i~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~~~---~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~  154 (248)
                      |||||.......    .+.+...+++|+.++.++++++.+.   ..++||++||..+..+.+..                
T Consensus        77 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~~~~~----------------  140 (230)
T 3guy_A           77 VHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVMIMSTAAQQPKAQE----------------  140 (230)
T ss_dssp             EECCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCEEEEECCGGGTSCCTTC----------------
T ss_pred             EEeCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeecccCCCCCCC----------------
Confidence            999997654321    2345678999999999999988765   22499999998876655432                


Q ss_pred             hccccchHHHHHHHHHHHHHHHHHhC---CccEEEEccCeeecCCCCCCCC-------ccHHHHHHHHcCCC-CCCCCCc
Q 025755          155 CKATENYYCLAKTIAEIQALEYAKRG---ELDIVTVCPSIVIGPMLQPTIN-------TSSLLLLGFLKGFF-FTTPSHS  223 (248)
Q Consensus       155 ~~~~~~~Y~~sK~~~e~l~~~~~~~~---~i~v~~vrpg~i~g~~~~~~~~-------~~~~~~~~~~~~~~-l~~~~~~  223 (248)
                           ..|+.||++.+.+.+.++.+.   ++++++|+||.+.+++......       ..+..+.....  + +..+..+
T Consensus       141 -----~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~dvA~~i~--~l~~~~~~~  213 (230)
T 3guy_A          141 -----STYCAVKWAVKGLIESVRLELKGKPMKIIAVYPGGMATEFWETSGKSLDTSSFMSAEDAALMIH--GALANIGNG  213 (230)
T ss_dssp             -----HHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEECCC----------------CCCHHHHHHHHH--HHCCEETTE
T ss_pred             -----chhHHHHHHHHHHHHHHHHHHHhcCeEEEEEECCcccChHHHhcCCCCCcccCCCHHHHHHHHH--HHHhCcCCC
Confidence                 339999987777777776654   6999999999999987543211       11111111111  3 3336778


Q ss_pred             hhhhhhhhhccc
Q 025755          224 YMLERTLVLNQG  235 (248)
Q Consensus       224 ~~~g~~l~vd~g  235 (248)
                      |++|+.+..+..
T Consensus       214 ~itg~~~~~~~~  225 (230)
T 3guy_A          214 YVSDITVNREGH  225 (230)
T ss_dssp             EEEEEEEEC---
T ss_pred             CccceeecCCCC
Confidence            999988776653

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=99.96  E-value=5.9e-30  Score=211.36  Aligned_cols=197  Identities=17%  Similarity=0.093  Sum_probs=150.3

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCC-CCEEEE
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAG-CTGVFH   83 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~-id~vi~   83 (248)
                      ++|+|+||| +|+||+++++.|+++|++|++++|+....           ..++.++.+|++|.+++.+++++ +|+|||
T Consensus         2 ~~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~-----------~~~~~~~~~Dl~d~~~~~~~~~~~~d~vih   69 (286)
T 3gpi_A            2 SLSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPM-----------PAGVQTLIADVTRPDTLASIVHLRPEILVY   69 (286)
T ss_dssp             CCCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCC-----------CTTCCEEECCTTCGGGCTTGGGGCCSEEEE
T ss_pred             CCCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcccc-----------ccCCceEEccCCChHHHHHhhcCCCCEEEE
Confidence            468999999 59999999999999999999999986431           35788999999999999999987 999999


Q ss_pred             ccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccccchHH
Q 025755           84 VACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYC  163 (248)
Q Consensus        84 ~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~  163 (248)
                      +||...     ..+..++++|+.++.++++++++.+.++|||+||.. +|+...   ..+++|+++..+      .+.|+
T Consensus        70 ~a~~~~-----~~~~~~~~~n~~~~~~ll~a~~~~~~~~~v~~SS~~-vyg~~~---~~~~~E~~~~~p------~~~Y~  134 (286)
T 3gpi_A           70 CVAASE-----YSDEHYRLSYVEGLRNTLSALEGAPLQHVFFVSSTG-VYGQEV---EEWLDEDTPPIA------KDFSG  134 (286)
T ss_dssp             CHHHHH-----HC-----CCSHHHHHHHHHHTTTSCCCEEEEEEEGG-GCCCCC---SSEECTTSCCCC------CSHHH
T ss_pred             eCCCCC-----CCHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEcccE-EEcCCC---CCCCCCCCCCCC------CChhh
Confidence            999743     234678899999999999999998889999999975 455432   567788877654      45699


Q ss_pred             HHHHHHHHHHHHHHHhCCccEEEEccCeeecCCCCCCCCccHHHHHHHHcCCCCCCCCCchhhhhhhhhccceeEEEeec
Q 025755          164 LAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKGFFFTTPSHSYMLERTLVLNQGVRLYRCKI  243 (248)
Q Consensus       164 ~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~l~vd~g~~~~~~~~  243 (248)
                      .+|..+|.+ ..+     ++++++||+++|||...       .++..+.. ...  ...+....+.+++++...++..++
T Consensus       135 ~sK~~~E~~-~~~-----~~~~ilR~~~v~G~~~~-------~~~~~~~~-~~~--~~~~~~~~~~i~v~Dva~~~~~~~  198 (286)
T 3gpi_A          135 KRMLEAEAL-LAA-----YSSTILRFSGIYGPGRL-------RMIRQAQT-PEQ--WPARNAWTNRIHRDDGAAFIAYLI  198 (286)
T ss_dssp             HHHHHHHHH-GGG-----SSEEEEEECEEEBTTBC-------HHHHHTTC-GGG--SCSSBCEECEEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHH-Hhc-----CCeEEEecccccCCCch-------hHHHHHHh-ccc--CCCcCceeEEEEHHHHHHHHHHHH
Confidence            999999988 543     89999999999999764       24444444 222  133334455678887766655444


Q ss_pred             c
Q 025755          244 Q  244 (248)
Q Consensus       244 ~  244 (248)
                      .
T Consensus       199 ~  199 (286)
T 3gpi_A          199 Q  199 (286)
T ss_dssp             H
T ss_pred             h
Confidence            3

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=99.96  E-value=7.3e-29  Score=202.99  Aligned_cols=168  Identities=20%  Similarity=0.232  Sum_probs=130.3

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-------
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-------   76 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-------   76 (248)
                      +++|+++||||+||||+++++.|+++|++|++++|+.+.     .+...  ..++.++.+|++|.++++++++       
T Consensus        14 ~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~-----~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   86 (266)
T 3p19_A           14 SMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVER-----LKALN--LPNTLCAQVDVTDKYTFDTAITRAEKIYG   86 (266)
T ss_dssp             -CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHH-----HHTTC--CTTEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHH-----HHHhh--cCCceEEEecCCCHHHHHHHHHHHHHHCC
Confidence            568999999999999999999999999999999997532     11111  2378899999999999888876       


Q ss_pred             CCCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHH----hcCCCEEEEEeccceeccCCCCCCCCccCCCC
Q 025755           77 GCTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCV----KAKVKRVVVVSSIGAVMLNPNWPKGQVMDEEC  148 (248)
Q Consensus        77 ~id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~----~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~  148 (248)
                      ++|+||||||.......    .+.|+..+++|+.|+.++++++.    +.+.++||++||..++.+.+..          
T Consensus        87 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~----------  156 (266)
T 3p19_A           87 PADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKKTFPDH----------  156 (266)
T ss_dssp             SEEEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTC----------
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhCCCCCCC----------
Confidence            68999999998654322    23456789999999998777664    4577899999998877665432          


Q ss_pred             CCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCC
Q 025755          149 WSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQP  199 (248)
Q Consensus       149 ~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~  199 (248)
                                 ..|+.||+..+.+.+.++.+   .|++||+|+||.+.+++...
T Consensus       157 -----------~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~  199 (266)
T 3p19_A          157 -----------AAYCGTKFAVHAISENVREEVAASNVRVMTIAPSAVKTELLSH  199 (266)
T ss_dssp             -----------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGG
T ss_pred             -----------chHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCccccchhhc
Confidence                       33999997555555544433   35999999999999997643

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=99.96  E-value=1.9e-29  Score=219.66  Aligned_cols=228  Identities=16%  Similarity=0.117  Sum_probs=156.6

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCch--hhHHhhhh---------cCCCCCeEEEEccCCCHHHH
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDE--KNAHLKKL---------EGASENLQLFKTDLLDYEAL   71 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~--~~~~~~~~---------~~~~~~~~~~~~Di~d~~~~   71 (248)
                      ...+|+||||||+|+||++++++|++.|++|++++|+....  .....+.+         .....++.++.+|++|.+++
T Consensus        66 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l  145 (427)
T 4f6c_A           66 HRPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDV  145 (427)
T ss_dssp             CCCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCC
T ss_pred             CCCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccC
Confidence            45678999999999999999999999999999999987521  11111111         01136899999999998888


Q ss_pred             HHHhCCCCEEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCC--CCCCCccCCCCC
Q 025755           72 CAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPN--WPKGQVMDEECW  149 (248)
Q Consensus        72 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~--~~~~~~~~e~~~  149 (248)
                      . .+.++|+||||||....   ..++...+++|+.++.++++++.+ +.++|||+||..+  +...  .....+++|+++
T Consensus       146 ~-~~~~~d~Vih~A~~~~~---~~~~~~~~~~Nv~g~~~l~~aa~~-~~~~~v~~SS~~~--G~~~~~~~~~~~~~E~~~  218 (427)
T 4f6c_A          146 V-LPENMDTIIHAGARTDH---FGDDDEFEKVNVQGTVDVIRLAQQ-HHARLIYVSTISV--GTYFDIDTEDVTFSEADV  218 (427)
T ss_dssp             C-CSSCCSEEEECCCCC----------CHHHHHHHHHHHHHHHHHH-TTCEEEEEEEGGG--GSEECSSCSCCEECTTCS
T ss_pred             C-CcCCCCEEEECCcccCC---CCCHHHHHHHHHHHHHHHHHHHHh-cCCcEEEECchHh--CCCccCCCCCcccccccc
Confidence            8 77899999999997653   345678999999999999999999 7799999999775  3211  122567777776


Q ss_pred             CchhhhccccchHHHHHHHHHHHHHHHHHhCCccEEEEccCeeecCCCCCCC------CccHHHHHHHHcCCCCCCCCCc
Q 025755          150 SDEEFCKATENYYCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTI------NTSSLLLLGFLKGFFFTTPSHS  223 (248)
Q Consensus       150 ~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~------~~~~~~~~~~~~~~~l~~~~~~  223 (248)
                      ..+.   .+.+.|+.+|..+|.+++.+++ .+++++++|||++|||......      .....++.....+..+.. ..+
T Consensus       219 ~~~~---~~~~~Y~~sK~~~E~~~~~~~~-~g~~~~ivRpg~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  293 (427)
T 4f6c_A          219 YKGQ---LLTSPYTRSKFYSELKVLEAVN-NGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGV-SMA  293 (427)
T ss_dssp             CSSC---CCCSHHHHHHHHHHHHHHHHHH-TTCCEEEEEECCEESCSSSCCCCTTGGGCHHHHHHHHHHHSSEEEH-HHH
T ss_pred             ccCC---CCCCchHHHHHHHHHHHHHHHH-cCCCEEEEeCCeeecCCCCCccccCcchHHHHHHHHHHHhcCCCCC-ccc
Confidence            4321   2467799999999999999876 4699999999999999765431      224456666655443221 011


Q ss_pred             hhhhhhhhhccceeEEEee
Q 025755          224 YMLERTLVLNQGVRLYRCK  242 (248)
Q Consensus       224 ~~~g~~l~vd~g~~~~~~~  242 (248)
                      ....+.+++|+...++..+
T Consensus       294 ~~~~~~v~v~DvA~ai~~~  312 (427)
T 4f6c_A          294 EMPVDFSFVDTTARQIVAL  312 (427)
T ss_dssp             TCEECCEEHHHHHHHHHHH
T ss_pred             cceEEEeeHHHHHHHHHHH
Confidence            2223345555554444333

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=99.96  E-value=1.3e-28  Score=206.95  Aligned_cols=173  Identities=18%  Similarity=0.193  Sum_probs=128.7

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhh----hhcCCCCCeEEEEccCCCHHHHHHHhC---
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLK----KLEGASENLQLFKTDLLDYEALCAATA---   76 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~----~~~~~~~~~~~~~~Di~d~~~~~~~~~---   76 (248)
                      +++|+++||||+||||+++++.|+++|++|++++|+.........+    .......++.++.+|++|.++++++++   
T Consensus         3 m~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~   82 (324)
T 3u9l_A            3 MSKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQII   82 (324)
T ss_dssp             --CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Confidence            7789999999999999999999999999999999874322222111    122234679999999999999998886   


Q ss_pred             ----CCCEEEEccccCCCCC----CCCccccchhhhHHHHHHHHHHH----HhcCCCEEEEEeccceeccC-CCCCCCCc
Q 025755           77 ----GCTGVFHVACPVPVGK----VPNPEVQLIDPAVVGTKNVLNSC----VKAKVKRVVVVSSIGAVMLN-PNWPKGQV  143 (248)
Q Consensus        77 ----~id~vi~~ag~~~~~~----~~~~~~~~~~~n~~g~~~~~~~~----~~~~~~~iV~vSS~~~~~~~-~~~~~~~~  143 (248)
                          ++|+||||||......    ..+++..++++|+.|+.++++++    ++.+.++||++||..+..+. +.      
T Consensus        83 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g~iV~isS~~~~~~~~~~------  156 (324)
T 3u9l_A           83 GEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIWISSSSSAGGTPPY------  156 (324)
T ss_dssp             HHHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCCSS------
T ss_pred             HHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEecchhccCCCCc------
Confidence                7999999999765332    12445678999999999998888    45577899999998765432 21      


Q ss_pred             cCCCCCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCC
Q 025755          144 MDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPML  197 (248)
Q Consensus       144 ~~e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~  197 (248)
                                     ...|+.||++.+.+++.++.+   .|++|++|+||.+.|+..
T Consensus       157 ---------------~~~Y~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~~  198 (324)
T 3u9l_A          157 ---------------LAPYFAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGTN  198 (324)
T ss_dssp             ---------------CHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC-----
T ss_pred             ---------------chhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccCch
Confidence                           234999998777766666554   469999999999998764

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=99.96  E-value=1.2e-29  Score=206.82  Aligned_cols=173  Identities=16%  Similarity=0.130  Sum_probs=134.6

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHH---CCCeEEEEEcCCCchhhHHhhhhcCC--CCCeEEEEccCCCHHHHHHHhC-
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLL---KGYMVHGTVRDPCDEKNAHLKKLEGA--SENLQLFKTDLLDYEALCAATA-   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~---~g~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Di~d~~~~~~~~~-   76 (248)
                      +|++|+++||||+||||+++++.|++   +|++|++++|+... .....+.+...  ..++.++.+|++|.++++++++ 
T Consensus         3 ~l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~-~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   81 (259)
T 1oaa_A            3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESM-LRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSA   81 (259)
T ss_dssp             CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHH-HHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHH-HHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHH
Confidence            47889999999999999999999999   89999999998642 22222233221  3568899999999998887764 


Q ss_pred             --------CCC--EEEEccccCCC--C-----CCCCccccchhhhHHHHHHHHHHHHhc------CCCEEEEEeccceec
Q 025755           77 --------GCT--GVFHVACPVPV--G-----KVPNPEVQLIDPAVVGTKNVLNSCVKA------KVKRVVVVSSIGAVM  133 (248)
Q Consensus        77 --------~id--~vi~~ag~~~~--~-----~~~~~~~~~~~~n~~g~~~~~~~~~~~------~~~~iV~vSS~~~~~  133 (248)
                              ++|  +||||||....  .     ...+.+...+++|+.|+.++++++.+.      +.++||++||..++.
T Consensus        82 ~~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~~~  161 (259)
T 1oaa_A           82 VRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQ  161 (259)
T ss_dssp             HHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTS
T ss_pred             HHhccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchhcC
Confidence                    368  99999997542  1     122456778999999999999998764      246899999988765


Q ss_pred             cCCCCCCCCccCCCCCCchhhhccccchHHHHHHHHHHHHHHHHHhC-CccEEEEccCeeecCCC
Q 025755          134 LNPNWPKGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKRG-ELDIVTVCPSIVIGPML  197 (248)
Q Consensus       134 ~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~-~i~v~~vrpg~i~g~~~  197 (248)
                      +.+..                     ..|+.||++.+.+.+.++.+. +++||+|+||.+.+++.
T Consensus       162 ~~~~~---------------------~~Y~asKaa~~~~~~~la~e~~~i~vn~v~PG~v~T~~~  205 (259)
T 1oaa_A          162 PYKGW---------------------GLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDNDMQ  205 (259)
T ss_dssp             CCTTC---------------------HHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSHHH
T ss_pred             CCCCc---------------------cHHHHHHHHHHHHHHHHHhhCCCceEEEecCCCcCcchH
Confidence            54332                     349999998888888887765 49999999999998863

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=99.96  E-value=1.6e-29  Score=216.78  Aligned_cols=228  Identities=16%  Similarity=0.087  Sum_probs=163.6

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcC----CCC-CeEEEEccCCCHHHHHHHhCC--CC
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEG----ASE-NLQLFKTDLLDYEALCAATAG--CT   79 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~----~~~-~~~~~~~Di~d~~~~~~~~~~--id   79 (248)
                      |+||||||+||||+++++.|+++|++|++++|+........++.+..    ... ++.++.+|++|.+++.+++++  +|
T Consensus        29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d  108 (381)
T 1n7h_A           29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKPD  108 (381)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhcCCC
Confidence            79999999999999999999999999999999864311111111111    112 788999999999999999885  69


Q ss_pred             EEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCC-----EEEEEeccceeccCCCCCCCCccCCCCCCchhh
Q 025755           80 GVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVK-----RVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEF  154 (248)
Q Consensus        80 ~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~-----~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~  154 (248)
                      +|||+||..........+..++++|+.++.++++++.+.+.+     +|||+||.. +|+...   . +++|+++..+  
T Consensus       109 ~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~-vyg~~~---~-~~~E~~~~~~--  181 (381)
T 1n7h_A          109 EVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSE-MFGSTP---P-PQSETTPFHP--  181 (381)
T ss_dssp             EEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGG-GGTTSC---S-SBCTTSCCCC--
T ss_pred             EEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHH-HhCCCC---C-CCCCCCCCCC--
Confidence            999999975432112345678999999999999999987544     999999966 444432   2 6777766543  


Q ss_pred             hccccchHHHHHHHHHHHHHHHHHhCCccEEEEccCeeecCCCCCCC--CccHHHHHHHHcCCCCC-CCCCchhhhhhhh
Q 025755          155 CKATENYYCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTI--NTSSLLLLGFLKGFFFT-TPSHSYMLERTLV  231 (248)
Q Consensus       155 ~~~~~~~Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~--~~~~~~~~~~~~~~~l~-~~~~~~~~g~~l~  231 (248)
                          .+.|+.+|..+|.++..++.++++++.++||+++|||......  .....++..+..+.... ...++....+.++
T Consensus       182 ----~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~v~  257 (381)
T 1n7h_A          182 ----RSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGF  257 (381)
T ss_dssp             ----CSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECEE
T ss_pred             ----CCchHHHHHHHHHHHHHHHHHhCCcEEEEEeCceeCCCCCCcchhHHHHHHHHHHHcCCCCeEEeCCCCceeeeEE
Confidence                4569999999999999999887799999999999999765321  11233445555554221 2233333456778


Q ss_pred             hccceeEEEeeccC
Q 025755          232 LNQGVRLYRCKIQI  245 (248)
Q Consensus       232 vd~g~~~~~~~~~~  245 (248)
                      +++...++..++..
T Consensus       258 v~Dva~a~~~~~~~  271 (381)
T 1n7h_A          258 AGDYVEAMWLMLQQ  271 (381)
T ss_dssp             HHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHhC
Confidence            88877766555543

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=99.96  E-value=1e-28  Score=198.48  Aligned_cols=161  Identities=25%  Similarity=0.246  Sum_probs=129.3

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCe-EEEEccCCCHHHHHHHhCCCCEE
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENL-QLFKTDLLDYEALCAATAGCTGV   81 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~Di~d~~~~~~~~~~id~v   81 (248)
                      .+++|+|+||||+|+||++++++|+++|++|++++|+.....  .+.     ..++ .++.+|++  +++.++++++|+|
T Consensus        18 ~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~--~~~-----~~~~~~~~~~Dl~--~~~~~~~~~~D~v   88 (236)
T 3e8x_A           18 YFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGP--ELR-----ERGASDIVVANLE--EDFSHAFASIDAV   88 (236)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHH--HHH-----HTTCSEEEECCTT--SCCGGGGTTCSEE
T ss_pred             CcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHH--HHH-----hCCCceEEEcccH--HHHHHHHcCCCEE
Confidence            478999999999999999999999999999999999874321  111     1367 89999999  7788889999999


Q ss_pred             EEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccccch
Q 025755           82 FHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENY  161 (248)
Q Consensus        82 i~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~  161 (248)
                      |||||....    ..+...+++|+.++.++++++++.+.++||++||..+..+.           ..+       .+...
T Consensus        89 i~~ag~~~~----~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~-----------~~~-------~~~~~  146 (236)
T 3e8x_A           89 VFAAGSGPH----TGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVGTVDPD-----------QGP-------MNMRH  146 (236)
T ss_dssp             EECCCCCTT----SCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCTTCSCGG-----------GSC-------GGGHH
T ss_pred             EECCCCCCC----CCccccchhhHHHHHHHHHHHHHcCCCEEEEEecCCCCCCC-----------CCh-------hhhhh
Confidence            999997653    45678999999999999999999999999999995432211           111       22456


Q ss_pred             HHHHHHHHHHHHHHHHHhCCccEEEEccCeeecCCCC
Q 025755          162 YCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQ  198 (248)
Q Consensus       162 Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~  198 (248)
                      |+.+|..+|.+++    +.+++++++|||+++|+...
T Consensus       147 Y~~sK~~~e~~~~----~~gi~~~~lrpg~v~~~~~~  179 (236)
T 3e8x_A          147 YLVAKRLADDELK----RSSLDYTIVRPGPLSNEEST  179 (236)
T ss_dssp             HHHHHHHHHHHHH----HSSSEEEEEEECSEECSCCC
T ss_pred             HHHHHHHHHHHHH----HCCCCEEEEeCCcccCCCCC
Confidence            9999999998776    45799999999999998754

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=99.96  E-value=7.6e-29  Score=228.13  Aligned_cols=231  Identities=19%  Similarity=0.139  Sum_probs=160.6

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhh--HHhhhhcCCCCCeEEEEccCCCHHHHHHHhC--CC
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKN--AHLKKLEGASENLQLFKTDLLDYEALCAATA--GC   78 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~--~i   78 (248)
                      .+++|+||||||+|+||++++++|+++|++|++++|+......  ..+..+.  ..++.++.+|++|.+++.++++  ++
T Consensus         8 ~~~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~v~~v~~Dl~d~~~l~~~~~~~~~   85 (699)
T 1z45_A            8 ESTSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLT--KHHIPFYEVDLCDRKGLEKVFKEYKI   85 (699)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHH--TSCCCEEECCTTCHHHHHHHHHHSCC
T ss_pred             ccCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhcc--CCceEEEEcCCCCHHHHHHHHHhCCC
Confidence            3578999999999999999999999999999999987643211  1111111  3468889999999999999998  89


Q ss_pred             CEEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCC-CCCCCccCCCCCCchhhhcc
Q 025755           79 TGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPN-WPKGQVMDEECWSDEEFCKA  157 (248)
Q Consensus        79 d~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~-~~~~~~~~e~~~~~~~~~~~  157 (248)
                      |+|||+||..........+.+++++|+.++.+++++|++.+.++||++||... ++... .....+++|+.+..      
T Consensus        86 D~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~iV~~SS~~v-yg~~~~~~~~~~~~E~~~~~------  158 (699)
T 1z45_A           86 DSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATV-YGDATRFPNMIPIPEECPLG------  158 (699)
T ss_dssp             CEEEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGG-GCCGGGSTTCCSBCTTSCCC------
T ss_pred             CEEEECCcccCcCccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECcHHH-hCCCccccccCCccccCCCC------
Confidence            99999999754321122335688999999999999999988899999999664 44321 11124566665543      


Q ss_pred             ccchHHHHHHHHHHHHHHHHHh--CCccEEEEccCeeecCCCCCC--------CCccHHHHHHHHcC--CCCCCCC----
Q 025755          158 TENYYCLAKTIAEIQALEYAKR--GELDIVTVCPSIVIGPMLQPT--------INTSSLLLLGFLKG--FFFTTPS----  221 (248)
Q Consensus       158 ~~~~Y~~sK~~~e~l~~~~~~~--~~i~v~~vrpg~i~g~~~~~~--------~~~~~~~~~~~~~~--~~l~~~~----  221 (248)
                      +.+.|+.+|..+|.+++.++.+  .+++++++||+++|||.....        ......++.+...+  ..+....    
T Consensus       159 p~~~Y~~sK~~~E~~~~~~~~~~~~g~~~~ilR~~~vyG~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  238 (699)
T 1z45_A          159 PTNPYGHTKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYD  238 (699)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC-----
T ss_pred             CCChHHHHHHHHHHHHHHHHHhccCCCcEEEEEeccccCCCcccccccccccchhHHHHHHHHHHhcCCCceEEeCCccc
Confidence            3456999999999999998876  579999999999999853210        11222334444433  2333322    


Q ss_pred             --CchhhhhhhhhccceeEEEee
Q 025755          222 --HSYMLERTLVLNQGVRLYRCK  242 (248)
Q Consensus       222 --~~~~~g~~l~vd~g~~~~~~~  242 (248)
                        ++....+.++||+...++..+
T Consensus       239 ~~~g~~~~~~i~v~Dva~a~~~a  261 (699)
T 1z45_A          239 SRDGTPIRDYIHVVDLAKGHIAA  261 (699)
T ss_dssp             -CCSSCEECEEEHHHHHHHHHHH
T ss_pred             CCCCCeeEeeEEHHHHHHHHHHH
Confidence              233344567777766554433

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=99.96  E-value=1.1e-29  Score=206.63  Aligned_cols=208  Identities=11%  Similarity=0.025  Sum_probs=138.5

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHH----HhCCCCEE
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCA----ATAGCTGV   81 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~----~~~~id~v   81 (248)
                      ||+++||||+||||+++++.|+++|++|++++|+...... . ..+.....++..+  |..+.+.+.+    .+.++|+|
T Consensus         1 Mk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~-~-~~l~~~~~~~~~~--d~~~v~~~~~~~~~~~g~iD~l   76 (254)
T 1zmt_A            1 MSTAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDE-L-EAFAETYPQLKPM--SEQEPAELIEAVTSAYGQVDVL   76 (254)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHH-H-HHHHHHCTTSEEC--CCCSHHHHHHHHHHHHSCCCEE
T ss_pred             CeEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHH-H-HHHHhcCCcEEEE--CHHHHHHHHHHHHHHhCCCCEE
Confidence            4799999999999999999999999999999998643221 1 1122222344443  5544332222    23479999


Q ss_pred             EEccccC-CCCC----CCCccccchhhhHHHHHHHHHHHHh----cCCCEEEEEeccceeccCCCCCCCCccCCCCCCch
Q 025755           82 FHVACPV-PVGK----VPNPEVQLIDPAVVGTKNVLNSCVK----AKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDE  152 (248)
Q Consensus        82 i~~ag~~-~~~~----~~~~~~~~~~~n~~g~~~~~~~~~~----~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~  152 (248)
                      |||||.. ....    ..+.++..+++|+.++.++++++.+    .+.++||++||..++.+.+..              
T Consensus        77 v~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~--------------  142 (254)
T 1zmt_A           77 VSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKEL--------------  142 (254)
T ss_dssp             EEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCTTC--------------
T ss_pred             EECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCcccccCCCCc--------------
Confidence            9999986 3221    1234567899999999988888753    466899999998776554332              


Q ss_pred             hhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCCC-----ccHHHHHHH----HcCC-----
Q 025755          153 EFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTIN-----TSSLLLLGF----LKGF-----  215 (248)
Q Consensus       153 ~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~~-----~~~~~~~~~----~~~~-----  215 (248)
                             ..|+.||++.+.+.+.++.+   .+++||+|+||.++||.......     ..+.....+    ..++     
T Consensus       143 -------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~~~~~~~~~~T~~~~~~~~~~~~~~~~~p~~~~~~p~  215 (254)
T 1zmt_A          143 -------STYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQK  215 (254)
T ss_dssp             -------HHHHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSSSSSCBCHH
T ss_pred             -------hHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCccccccccccCCCcccccChHHHHHHhccCCCCCCcCHH
Confidence                   33999997666665555443   25999999999995554322100     001111111    1111     


Q ss_pred             -------CCCCCCCchhhhhhhhhccceeE
Q 025755          216 -------FFTTPSHSYMLERTLVLNQGVRL  238 (248)
Q Consensus       216 -------~l~~~~~~~~~g~~l~vd~g~~~  238 (248)
                             ++.++...+++|+++.+|||+..
T Consensus       216 dvA~~v~~l~s~~~~~~tG~~~~vdgG~~~  245 (254)
T 1zmt_A          216 ELGELVAFLASGSCDYLTGQVFWLAGGFPM  245 (254)
T ss_dssp             HHHHHHHHHHTTSCGGGTTCEEEESTTCCC
T ss_pred             HHHHHHHHHhCcccCCccCCEEEECCCchh
Confidence                   66677789999999999999764

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=99.96  E-value=1.5e-28  Score=201.35  Aligned_cols=225  Identities=18%  Similarity=0.091  Sum_probs=150.6

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHH-CCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC------
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLL-KGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA------   76 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~-~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~------   76 (248)
                      .++|+++||||+||||+++++.|++ +|++|++++|+... .....+.+.....++.++.+|++|.++++++++      
T Consensus         2 ~~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~-~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   80 (276)
T 1wma_A            2 SGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTR-GQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEY   80 (276)
T ss_dssp             CCCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHH-HHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHH-HHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhc
Confidence            4689999999999999999999999 99999999998632 222233333334678999999999999988876      


Q ss_pred             -CCCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHHhc--CCCEEEEEeccceeccCCCCCC-------CC
Q 025755           77 -GCTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCVKA--KVKRVVVVSSIGAVMLNPNWPK-------GQ  142 (248)
Q Consensus        77 -~id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~~~--~~~~iV~vSS~~~~~~~~~~~~-------~~  142 (248)
                       ++|+||||||.......    .+.+...+++|+.++.++++++.+.  ..++||++||..++++.....+       ..
T Consensus        81 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~  160 (276)
T 1wma_A           81 GGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSE  160 (276)
T ss_dssp             SSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHHHCS
T ss_pred             CCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECChhhhcccccCChhHHhhcccc
Confidence             78999999997654322    1334678999999999999999876  2369999999876643211000       01


Q ss_pred             ccCCCCCCch-------------hhhccccchHHHHHHHHHHHHHHHHHh-------CCccEEEEccCeeecCCCCCCCC
Q 025755          143 VMDEECWSDE-------------EFCKATENYYCLAKTIAEIQALEYAKR-------GELDIVTVCPSIVIGPMLQPTIN  202 (248)
Q Consensus       143 ~~~e~~~~~~-------------~~~~~~~~~Y~~sK~~~e~l~~~~~~~-------~~i~v~~vrpg~i~g~~~~~~~~  202 (248)
                      +++|+++...             .....+...|+.||++.+.+++.++.+       .++++++|+||.+.+++......
T Consensus       161 ~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~  240 (276)
T 1wma_A          161 TITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGPKAT  240 (276)
T ss_dssp             SCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCTTCS
T ss_pred             ccchhhhhhhhhhhhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCccccCcCCcccc
Confidence            1222111000             000123366999997666666655543       46999999999999998654222


Q ss_pred             ccHHHHHHHHcCCCCCC-CC-Cchhhhhhhh
Q 025755          203 TSSLLLLGFLKGFFFTT-PS-HSYMLERTLV  231 (248)
Q Consensus       203 ~~~~~~~~~~~~~~l~~-~~-~~~~~g~~l~  231 (248)
                      ..+........  ++.. +. ..+++|+.+.
T Consensus       241 ~~~~~~a~~~~--~l~~~~~~~~~~~G~~~~  269 (276)
T 1wma_A          241 KSPEEGAETPV--YLALLPPDAEGPHGQFVS  269 (276)
T ss_dssp             BCHHHHTHHHH--HHHSCCTTCCCCCSCEEE
T ss_pred             CChhHhhhhHh--hhhcCcccccccCceEec
Confidence            22222222111  3333 22 3588888765

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=99.96  E-value=2.7e-28  Score=205.84  Aligned_cols=179  Identities=21%  Similarity=0.173  Sum_probs=138.9

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchh--hHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC--CCCEEE
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEK--NAHLKKLEGASENLQLFKTDLLDYEALCAATA--GCTGVF   82 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~--~id~vi   82 (248)
                      |+||||||+||||++++++|+++|++|++++|......  ...+....  ..++.++.+|++|.+++.++++  ++|+||
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~D~vi   78 (338)
T 1udb_A            1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLG--GKHPTFVEGDIRNEALMTEILHDHAIDTVI   78 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHH--TSCCEEEECCTTCHHHHHHHHHHTTCSEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhc--CCcceEEEccCCCHHHHHHHhhccCCCEEE
Confidence            37999999999999999999999999999987542211  11111111  2467889999999999999886  599999


Q ss_pred             EccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccccchH
Q 025755           83 HVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYY  162 (248)
Q Consensus        83 ~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y  162 (248)
                      ||||..........+..++++|+.++.++++++++.+.++||++||.. .++...   ..+++|+.+..+     +.+.|
T Consensus        79 h~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~-~~g~~~---~~~~~e~~~~~~-----~~~~Y  149 (338)
T 1udb_A           79 HFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSAT-VYGDNP---KIPYVESFPTGT-----PQSPY  149 (338)
T ss_dssp             ECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGG-GGCSCC---SSSBCTTSCCCC-----CSSHH
T ss_pred             ECCccCccccchhcHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccHH-HhCCCC---CCCcCcccCCCC-----CCChH
Confidence            999975432112234678899999999999999988889999999965 454432   456677665422     14569


Q ss_pred             HHHHHHHHHHHHHHHHhC-CccEEEEccCeeecCC
Q 025755          163 CLAKTIAEIQALEYAKRG-ELDIVTVCPSIVIGPM  196 (248)
Q Consensus       163 ~~sK~~~e~l~~~~~~~~-~i~v~~vrpg~i~g~~  196 (248)
                      +.||.++|.+++.++.++ +++++++||+++|||.
T Consensus       150 ~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~  184 (338)
T 1udb_A          150 GKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAH  184 (338)
T ss_dssp             HHHHHHHHHHHHHHHHHSTTCEEEEEEECEEECCC
T ss_pred             HHHHHHHHHHHHHHHHhcCCCceEEEeeceecCCC
Confidence            999999999999998776 7999999999999984

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=99.96  E-value=2.3e-28  Score=196.15  Aligned_cols=203  Identities=17%  Similarity=0.042  Sum_probs=133.7

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-------
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-------   76 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-------   76 (248)
                      .++|+++||||+||||++++++|+++|++|++++|+.... ....+.+    .++.++.+|++|.++++++++       
T Consensus         3 ~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~-~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~~~~   77 (234)
T 2ehd_A            3 GMKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRL-QALAAEL----EGALPLPGDVREEGDWARAVAAMEEAFG   77 (234)
T ss_dssp             -CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHHS----TTCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHH-HHHHHHh----hhceEEEecCCCHHHHHHHHHHHHHHcC
Confidence            4578999999999999999999999999999999975321 1222222    268899999999998888765       


Q ss_pred             CCCEEEEccccCCCCC----CCCccccchhhhHHHHHHHHHHH----HhcCCCEEEEEeccceeccCCCCCCCCccCCCC
Q 025755           77 GCTGVFHVACPVPVGK----VPNPEVQLIDPAVVGTKNVLNSC----VKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEEC  148 (248)
Q Consensus        77 ~id~vi~~ag~~~~~~----~~~~~~~~~~~n~~g~~~~~~~~----~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~  148 (248)
                      ++|+||||||......    ..+.+...+++|+.++.++++.+    ++.+.++||++||..++.+.+.           
T Consensus        78 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~-----------  146 (234)
T 2ehd_A           78 ELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKNPFKG-----------  146 (234)
T ss_dssp             CCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCTTTTSCCTT-----------
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEECCchhcCCCCC-----------
Confidence            6899999999764322    12345678999999997655554    4556789999999876554332           


Q ss_pred             CCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCCC----ccHHHHHHHHcCCCCCCCC
Q 025755          149 WSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTIN----TSSLLLLGFLKGFFFTTPS  221 (248)
Q Consensus       149 ~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~~----~~~~~~~~~~~~~~l~~~~  221 (248)
                                ...|+.+|++.+.+++.++.+   .++++++++||.+.+++......    ..+..+.....  ++....
T Consensus       147 ----------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~dvA~~~~--~l~~~~  214 (234)
T 2ehd_A          147 ----------GAAYNASKFGLLGLAGAAMLDLREANVRVVNVLPGSVDTGFAGNTPGQAWKLKPEDVAQAVL--FALEMP  214 (234)
T ss_dssp             ----------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEECC----------------CCHHHHHHHHH--HHHHSC
T ss_pred             ----------CchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCcccccccccCCCCHHHHHHHHH--HHhCCC
Confidence                      234999998666655555432   36999999999999986542110    11111111111  444556


Q ss_pred             Cchhhhhhhhhcc
Q 025755          222 HSYMLERTLVLNQ  234 (248)
Q Consensus       222 ~~~~~g~~l~vd~  234 (248)
                      ..+++|+++..++
T Consensus       215 ~~~~~g~~~~~~~  227 (234)
T 2ehd_A          215 GHAMVSEIELRPT  227 (234)
T ss_dssp             CSSCCCEEECCC-
T ss_pred             cccccceEEEeec
Confidence            6788888665544

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=99.96  E-value=4e-28  Score=197.19  Aligned_cols=169  Identities=14%  Similarity=0.036  Sum_probs=132.1

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCe-EEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCH-HHHHHHhC----
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYM-VHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDY-EALCAATA----   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~-~~~~~~~~----   76 (248)
                      ++++|+++||||+||||++++++|+++|++ |++++|+........+.... ...++.++.+|++|. ++++++++    
T Consensus         2 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~   80 (254)
T 1sby_A            2 DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAIN-PKVNITFHTYDVTVPVAESKKLLKKIFD   80 (254)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHC-TTSEEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred             CCCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhC-CCceEEEEEEecCCChHHHHHHHHHHHH
Confidence            488999999999999999999999999997 99999986422222222211 134688999999998 88777765    


Q ss_pred             ---CCCEEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhc----C---CCEEEEEeccceeccCCCCCCCCccCC
Q 025755           77 ---GCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKA----K---VKRVVVVSSIGAVMLNPNWPKGQVMDE  146 (248)
Q Consensus        77 ---~id~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~----~---~~~iV~vSS~~~~~~~~~~~~~~~~~e  146 (248)
                         ++|+||||||...    .+.+...+++|+.++.++++++.+.    +   .++||++||..++.+.+.         
T Consensus        81 ~~g~id~lv~~Ag~~~----~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---------  147 (254)
T 1sby_A           81 QLKTVDILINGAGILD----DHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQ---------  147 (254)
T ss_dssp             HHSCCCEEEECCCCCC----TTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTT---------
T ss_pred             hcCCCCEEEECCccCC----HHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccCCCC---------
Confidence               7899999999753    3567889999999999999988753    1   478999999876655432         


Q ss_pred             CCCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCC
Q 025755          147 ECWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPML  197 (248)
Q Consensus       147 ~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~  197 (248)
                                  ...|+.||++.+.+++.++.+   .++++++|+||.+.||+.
T Consensus       148 ------------~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~  189 (254)
T 1sby_A          148 ------------VPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLV  189 (254)
T ss_dssp             ------------SHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHH
T ss_pred             ------------chHHHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCccCccc
Confidence                        234999998777777766653   469999999999999864

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=99.96  E-value=3.3e-28  Score=193.35  Aligned_cols=158  Identities=18%  Similarity=0.222  Sum_probs=130.8

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCC-HHHHHHHhCCCCEEEEcc
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLD-YEALCAATAGCTGVFHVA   85 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d-~~~~~~~~~~id~vi~~a   85 (248)
                      |+|+||||+|+||++++++|+++|++|++++|+......         ..++.++++|++| .+++.++++++|+|||||
T Consensus         1 M~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~---------~~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~a   71 (219)
T 3dqp_A            1 MKIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQ---------YNNVKAVHFDVDWTPEEMAKQLHGMDAIINVS   71 (219)
T ss_dssp             CEEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCC---------CTTEEEEECCTTSCHHHHHTTTTTCSEEEECC
T ss_pred             CeEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhh---------cCCceEEEecccCCHHHHHHHHcCCCEEEECC
Confidence            379999999999999999999999999999998642110         1579999999999 999999999999999999


Q ss_pred             ccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccccchHHHH
Q 025755           86 CPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLA  165 (248)
Q Consensus        86 g~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~s  165 (248)
                      |...        ...+++|+.++.++++++++.+.++||++||..+..+       .+..|       ....+.+.|+.+
T Consensus        72 g~~~--------~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~-------~~~~e-------~~~~~~~~Y~~s  129 (219)
T 3dqp_A           72 GSGG--------KSLLKVDLYGAVKLMQAAEKAEVKRFILLSTIFSLQP-------EKWIG-------AGFDALKDYYIA  129 (219)
T ss_dssp             CCTT--------SSCCCCCCHHHHHHHHHHHHTTCCEEEEECCTTTTCG-------GGCCS-------HHHHHTHHHHHH
T ss_pred             cCCC--------CCcEeEeHHHHHHHHHHHHHhCCCEEEEECcccccCC-------Ccccc-------cccccccHHHHH
Confidence            9764        2378999999999999999999999999999654332       12233       122345669999


Q ss_pred             HHHHHHHHHHHHHhCCccEEEEccCeeecCCCC
Q 025755          166 KTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQ  198 (248)
Q Consensus       166 K~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~  198 (248)
                      |..+|.+++   ...+++++++|||+++|+...
T Consensus       130 K~~~e~~~~---~~~~i~~~ilrp~~v~g~~~~  159 (219)
T 3dqp_A          130 KHFADLYLT---KETNLDYTIIQPGALTEEEAT  159 (219)
T ss_dssp             HHHHHHHHH---HSCCCEEEEEEECSEECSCCC
T ss_pred             HHHHHHHHH---hccCCcEEEEeCceEecCCCC
Confidence            999998886   456799999999999998654

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=99.96  E-value=3.7e-29  Score=203.53  Aligned_cols=215  Identities=16%  Similarity=0.180  Sum_probs=138.0

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCC----CCEE
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAG----CTGV   81 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~----id~v   81 (248)
                      ||+++||||+||||++++++|+++|++|++++|+..+...             . +.+|++|.+++++++++    +|+|
T Consensus         1 mk~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~-------------~-~~~Dl~~~~~v~~~~~~~~~~id~l   66 (257)
T 1fjh_A            1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA-------------D-LSTAEGRKQAIADVLAKCSKGMDGL   66 (257)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC-------------C-TTSHHHHHHHHHHHHTTCTTCCSEE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc-------------c-cccCCCCHHHHHHHHHHhCCCCCEE
Confidence            4799999999999999999999999999999998643210             1 57899999999998864    5999


Q ss_pred             EEccccCCCCCCCCccccchhhhHHHHHHHHHHHHh----cCCCEEEEEeccceeccCCCCCC-CCccCCCCCCchh---
Q 025755           82 FHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVK----AKVKRVVVVSSIGAVMLNPNWPK-GQVMDEECWSDEE---  153 (248)
Q Consensus        82 i~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~----~~~~~iV~vSS~~~~~~~~~~~~-~~~~~e~~~~~~~---  153 (248)
                      |||||....   ...++..+++|+.++.++++++.+    .+.++||++||..++........ ...+.+++.....   
T Consensus        67 v~~Ag~~~~---~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  143 (257)
T 1fjh_A           67 VLCAGLGPQ---TKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIV  143 (257)
T ss_dssp             EECCCCCTT---CSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHHHH
T ss_pred             EECCCCCCC---cccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhhccccccchhhhhhcccchhhhhhhh
Confidence            999997652   234788999999999999888864    45689999999876532110000 0000000000000   


Q ss_pred             ---hhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCC-CC-ccHHHHHHH--HcCC--------
Q 025755          154 ---FCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPT-IN-TSSLLLLGF--LKGF--------  215 (248)
Q Consensus       154 ---~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~-~~-~~~~~~~~~--~~~~--------  215 (248)
                         ....+...|+.||++.+.+++.++.+   .++++++|+||.+.+++.... .. ........+  ..++        
T Consensus       144 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA  223 (257)
T 1fjh_A          144 EHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKFVPPMGRRAEPSEMA  223 (257)
T ss_dssp             HTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC---------------------CCCSTTSCCCTHHHH
T ss_pred             hcccCCCCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchhhccchhHHHHHHhcccccCCCCCHHHHH
Confidence               01112456999998777666665543   469999999999999875432 10 001111100  0011        


Q ss_pred             ----CCCCCCCchhhhhhhhhcccee
Q 025755          216 ----FFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       216 ----~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                          ++..+...+++|+.+.+|||..
T Consensus       224 ~~~~~l~~~~~~~~tG~~~~vdgG~~  249 (257)
T 1fjh_A          224 SVIAFLMSPAASYVHGAQIVIDGGID  249 (257)
T ss_dssp             HHHHHHTSGGGTTCCSCEEEESTTHH
T ss_pred             HHHHHHhCchhcCCcCCEEEECCCcc
Confidence                5555556799999999999965

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=99.96  E-value=2.7e-29  Score=210.04  Aligned_cols=202  Identities=16%  Similarity=0.077  Sum_probs=125.0

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCC--CCEEEE
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAG--CTGVFH   83 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~--id~vi~   83 (248)
                      +|+|+||||+|+||++++++|+++|++|++++|+...             ++  ++.+|++|.+++.+++++  +|+|||
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-------------~~--~~~~Dl~d~~~~~~~~~~~~~d~vih   66 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR-------------PK--FEQVNLLDSNAVHHIIHDFQPHVIVH   66 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC---------------------------------CHHHHHHHCCSEEEE
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC-------------CC--eEEecCCCHHHHHHHHHhhCCCEEEE
Confidence            5799999999999999999999999999999987531             12  678999999999988874  899999


Q ss_pred             ccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccccchHH
Q 025755           84 VACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYC  163 (248)
Q Consensus        84 ~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~  163 (248)
                      |||..........+..++++|+.++.++++++.+.+. +|||+||...+.+ .    ..+++|+++..+      .+.|+
T Consensus        67 ~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~~~-~----~~~~~E~~~~~~------~~~Y~  134 (315)
T 2ydy_A           67 CAAERRPDVVENQPDAASQLNVDASGNLAKEAAAVGA-FLIYISSDYVFDG-T----NPPYREEDIPAP------LNLYG  134 (315)
T ss_dssp             CC-------------------CHHHHHHHHHHHHHTC-EEEEEEEGGGSCS-S----SCSBCTTSCCCC------CSHHH
T ss_pred             CCcccChhhhhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEchHHHcCC-C----CCCCCCCCCCCC------cCHHH
Confidence            9998655433456678999999999999999999875 9999999765433 2    456778776544      45699


Q ss_pred             HHHHHHHHHHHHHHHhCCccEEEEccCeeecCCCCCCCCccHHHHHHHH-cCCCCCCCCCchhhhhhhhhccceeEEE
Q 025755          164 LAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTINTSSLLLLGFL-KGFFFTTPSHSYMLERTLVLNQGVRLYR  240 (248)
Q Consensus       164 ~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~g~~l~vd~g~~~~~  240 (248)
                      .+|..+|.+++.++    ++++++||+.+|||...........++.... .+..+.....  ...+.+++++...++.
T Consensus       135 ~sK~~~e~~~~~~~----~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~v~Dva~a~~  206 (315)
T 2ydy_A          135 KTKLDGEKAVLENN----LGAAVLRIPILYGEVEKLEESAVTVMFDKVQFSNKSANMDHW--QQRFPTHVKDVATVCR  206 (315)
T ss_dssp             HHHHHHHHHHHHHC----TTCEEEEECSEECSCSSGGGSTTGGGHHHHHCCSSCEEEECS--SBBCCEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhC----CCeEEEeeeeeeCCCCcccccHHHHHHHHHHhcCCCeeeccC--ceECcEEHHHHHHHHH
Confidence            99999999998874    6679999999999976532123334455555 4543322221  2234566666555443

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=99.96  E-value=5.9e-28  Score=201.35  Aligned_cols=197  Identities=19%  Similarity=0.165  Sum_probs=137.8

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCC-CCCeEEEEccCCCH-HHHHHHhC----
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGA-SENLQLFKTDLLDY-EALCAATA----   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Di~d~-~~~~~~~~----   76 (248)
                      .+++|+++||||+||||++++++|+++|++|++++|+.... ....+.+... ..++.++.+|++|. ++++++++    
T Consensus         9 ~~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~-~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~   87 (311)
T 3o26_A            9 VTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKG-HEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKT   87 (311)
T ss_dssp             ---CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred             cCCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHH
Confidence            36789999999999999999999999999999999987432 2333334333 35799999999997 77777664    


Q ss_pred             ---CCCEEEEccccCCCC----------------------------------CCCCccccchhhhHHHHHHHHHHHHh--
Q 025755           77 ---GCTGVFHVACPVPVG----------------------------------KVPNPEVQLIDPAVVGTKNVLNSCVK--  117 (248)
Q Consensus        77 ---~id~vi~~ag~~~~~----------------------------------~~~~~~~~~~~~n~~g~~~~~~~~~~--  117 (248)
                         ++|+||||||+....                                  ...+.+...+++|+.|+.++++++.+  
T Consensus        88 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l  167 (311)
T 3o26_A           88 HFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLL  167 (311)
T ss_dssp             HHSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred             hCCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhhHhh
Confidence               799999999986421                                  01123456789999999888888764  


Q ss_pred             --cCCCEEEEEeccceeccCCCCCCC--CccCCCCCCch--------------------hhhccccchHHHHHHHHHHHH
Q 025755          118 --AKVKRVVVVSSIGAVMLNPNWPKG--QVMDEECWSDE--------------------EFCKATENYYCLAKTIAEIQA  173 (248)
Q Consensus       118 --~~~~~iV~vSS~~~~~~~~~~~~~--~~~~e~~~~~~--------------------~~~~~~~~~Y~~sK~~~e~l~  173 (248)
                        .+.++||++||..+..+.......  ...+++.+...                    .........|+.||++.+.++
T Consensus       168 ~~~~~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~  247 (311)
T 3o26_A          168 QLSDSPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNAYT  247 (311)
T ss_dssp             TTSSSCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSSCHHHHHHHHHHHHHH
T ss_pred             ccCCCCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcccchhhHHHHHHHHHHH
Confidence              356899999998776543210000  00000000000                    000012356999999999999


Q ss_pred             HHHHHhC-CccEEEEccCeeecCCCCCC
Q 025755          174 LEYAKRG-ELDIVTVCPSIVIGPMLQPT  200 (248)
Q Consensus       174 ~~~~~~~-~i~v~~vrpg~i~g~~~~~~  200 (248)
                      +.++.++ +++|++|+||++.+++....
T Consensus       248 ~~la~e~~~i~v~~v~PG~v~T~~~~~~  275 (311)
T 3o26_A          248 RVLANKIPKFQVNCVCPGLVKTEMNYGI  275 (311)
T ss_dssp             HHHHHHCTTSEEEEECCCSBCSGGGTTC
T ss_pred             HHHHhhcCCceEEEecCCceecCCcCCC
Confidence            9998875 69999999999999986554

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=99.96  E-value=3.7e-28  Score=198.16  Aligned_cols=210  Identities=15%  Similarity=0.032  Sum_probs=143.4

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC------
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA------   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~------   76 (248)
                      +|++|+++||||+||||+++++.|+++|++|++++|+.... ....+.+.....++.++.+|++|.++++++++      
T Consensus         2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (260)
T 2qq5_A            2 PMNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTL-RVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQ   80 (260)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhc
Confidence            47889999999999999999999999999999999986422 22223332224578899999999998877653      


Q ss_pred             --CCCEEEEccc--cC-----CCC----CCCCccccchhhhHHHHHHHHHHHH----hcCCCEEEEEeccceeccCCCCC
Q 025755           77 --GCTGVFHVAC--PV-----PVG----KVPNPEVQLIDPAVVGTKNVLNSCV----KAKVKRVVVVSSIGAVMLNPNWP  139 (248)
Q Consensus        77 --~id~vi~~ag--~~-----~~~----~~~~~~~~~~~~n~~g~~~~~~~~~----~~~~~~iV~vSS~~~~~~~~~~~  139 (248)
                        ++|+||||||  ..     ...    ...+.|...+++|+.++.++.+++.    +.+.++||++||..+..+.+   
T Consensus        81 ~g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---  157 (260)
T 2qq5_A           81 QGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQYMF---  157 (260)
T ss_dssp             TTCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGTCCEEEEECCGGGTSCCS---
T ss_pred             CCCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcCCcEEEEEcChhhcCCCC---
Confidence              5799999994  32     111    1234566788999999877766654    44668999999977543221   


Q ss_pred             CCCccCCCCCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCCCc--c--HHHHHHH-
Q 025755          140 KGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTINT--S--SLLLLGF-  211 (248)
Q Consensus       140 ~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~~~--~--~~~~~~~-  211 (248)
                                         ...|+.||++.+.+.+.++.+   .|++||+|+||.+.+++.......  .  ....... 
T Consensus       158 -------------------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~  218 (260)
T 2qq5_A          158 -------------------NVPYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTELLKEHMAKEEVLQDPVLKQFK  218 (260)
T ss_dssp             -------------------SHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTTC-------------------
T ss_pred             -------------------CCchHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHHHHHhhccccccchhHHHHHH
Confidence                               134999998666666555532   369999999999999975421000  0  0000000 


Q ss_pred             -HcC------------CCCCCCCC-chhhhhhhhhccc
Q 025755          212 -LKG------------FFFTTPSH-SYMLERTLVLNQG  235 (248)
Q Consensus       212 -~~~------------~~l~~~~~-~~~~g~~l~vd~g  235 (248)
                       ..+            .++.++.. .|+||+++.+|+-
T Consensus       219 ~~~~~~~~pe~va~~v~~l~s~~~~~~itG~~i~~~~~  256 (260)
T 2qq5_A          219 SAFSSAETTELSGKCVVALATDPNILSLSGKVLPSCDL  256 (260)
T ss_dssp             ---CHHHHHHHHHHHHHHHHTCTTGGGGTTCEEEHHHH
T ss_pred             hhhccCCCHHHHHHHHHHHhcCcccccccceeechhhh
Confidence             000            16777766 4899999988764

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=99.96  E-value=1.4e-28  Score=202.79  Aligned_cols=173  Identities=17%  Similarity=0.074  Sum_probs=126.0

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCC-CCCeEEEEccCCCHHHHHHHhC------
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGA-SENLQLFKTDLLDYEALCAATA------   76 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Di~d~~~~~~~~~------   76 (248)
                      +++|++|||||+||||+++++.|+++|++|++++|+.... ....+.+... ...+.++++|++|.++++++++      
T Consensus        31 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  109 (281)
T 4dry_A           31 GEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVL-DAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEF  109 (281)
T ss_dssp             ---CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH-HHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            5789999999999999999999999999999999986432 2222222221 2335899999999999888875      


Q ss_pred             -CCCEEEEccccCCCC-----CCCCccccchhhhHHHHHHHHHHHHhc----C--CCEEEEEeccceeccCCCCCCCCcc
Q 025755           77 -GCTGVFHVACPVPVG-----KVPNPEVQLIDPAVVGTKNVLNSCVKA----K--VKRVVVVSSIGAVMLNPNWPKGQVM  144 (248)
Q Consensus        77 -~id~vi~~ag~~~~~-----~~~~~~~~~~~~n~~g~~~~~~~~~~~----~--~~~iV~vSS~~~~~~~~~~~~~~~~  144 (248)
                       ++|+||||||.....     ...+.|+.++++|+.++.++++++.+.    +  .++||++||..+..+.+..      
T Consensus       110 g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~------  183 (281)
T 4dry_A          110 ARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTPRPNS------  183 (281)
T ss_dssp             SCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTCCCTTC------
T ss_pred             CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCCCCCCC------
Confidence             579999999975432     113445678999999988887776543    3  5799999998876665432      


Q ss_pred             CCCCCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCC
Q 025755          145 DEECWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQ  198 (248)
Q Consensus       145 ~e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~  198 (248)
                                     ..|+.||++.+.+.+.++.+   .+++||+|+||.+.+++..
T Consensus       184 ---------------~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~  225 (281)
T 4dry_A          184 ---------------APYTATKHAITGLTKSTALDGRMHDIACGQIDIGNAATDMTA  225 (281)
T ss_dssp             ---------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC----
T ss_pred             ---------------hhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcCcChhhh
Confidence                           33999997555555544433   3599999999999998754

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=99.95  E-value=8.2e-29  Score=205.77  Aligned_cols=223  Identities=13%  Similarity=0.114  Sum_probs=147.7

Q ss_pred             CCCCcEEEEEcCc--cHHHHHHHHHHHHCCCeEEEEEcCCC---------chhhHHhhhhcCCC--CCeEEEEcc-----
Q 025755            3 GEDKERVCVTGAG--GYIASWLVKYLLLKGYMVHGTVRDPC---------DEKNAHLKKLEGAS--ENLQLFKTD-----   64 (248)
Q Consensus         3 ~l~~k~vlVtG~~--g~iG~~~~~~l~~~g~~V~~~~r~~~---------~~~~~~~~~~~~~~--~~~~~~~~D-----   64 (248)
                      ++++|+++||||+  +|||+++++.|+++|++|++++|+..         .......+.+....  .....+.+|     
T Consensus         5 ~l~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (297)
T 1d7o_A            5 DLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFDN   84 (297)
T ss_dssp             CCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCCS
T ss_pred             ccCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhhhhhhccccccccccccccceeccc
Confidence            3788999999999  99999999999999999999986420         00001111111100  012334443     


Q ss_pred             ---CC----C--------HHHHHHHhC-------CCCEEEEccccCC--CC----CCCCccccchhhhHHHHHHHHHHHH
Q 025755           65 ---LL----D--------YEALCAATA-------GCTGVFHVACPVP--VG----KVPNPEVQLIDPAVVGTKNVLNSCV  116 (248)
Q Consensus        65 ---i~----d--------~~~~~~~~~-------~id~vi~~ag~~~--~~----~~~~~~~~~~~~n~~g~~~~~~~~~  116 (248)
                         +.    |        .++++++++       ++|+||||||...  ..    ...+.|+..+++|+.++.++++++.
T Consensus        85 ~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~  164 (297)
T 1d7o_A           85 PEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFL  164 (297)
T ss_dssp             GGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHG
T ss_pred             hhhhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHH
Confidence               32    1        334444443       6899999999643  11    1123456789999999999999998


Q ss_pred             hc--CCCEEEEEeccceeccCCCC-CCCCccCCCCCCchhhhccccchHHHHHHHH----HHHHHHHHHhCCccEEEEcc
Q 025755          117 KA--KVKRVVVVSSIGAVMLNPNW-PKGQVMDEECWSDEEFCKATENYYCLAKTIA----EIQALEYAKRGELDIVTVCP  189 (248)
Q Consensus       117 ~~--~~~~iV~vSS~~~~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~----e~l~~~~~~~~~i~v~~vrp  189 (248)
                      +.  ..++||++||..+..+.+.. ..                     |+.||++.    +.++.+++++.|++||+|+|
T Consensus       165 ~~m~~~g~iv~isS~~~~~~~~~~~~~---------------------Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~P  223 (297)
T 1d7o_A          165 PIMNPGGASISLTYIASERIIPGYGGG---------------------MSSAKAALESDTRVLAFEAGRKQNIRVNTISA  223 (297)
T ss_dssp             GGEEEEEEEEEEECGGGTSCCTTCTTT---------------------HHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEE
T ss_pred             HHhccCceEEEEeccccccCCCCcchH---------------------HHHHHHHHHHHHHHHHHHhCcccCcEEEEEec
Confidence            75  23799999998776655432 23                     99999754    44555555323699999999


Q ss_pred             CeeecCCCCCCCCccHHHHHHHH----cCC------------CCCCCCCchhhhhhhhhccceeEEEeeccCCC
Q 025755          190 SIVIGPMLQPTINTSSLLLLGFL----KGF------------FFTTPSHSYMLERTLVLNQGVRLYRCKIQIPT  247 (248)
Q Consensus       190 g~i~g~~~~~~~~~~~~~~~~~~----~~~------------~l~~~~~~~~~g~~l~vd~g~~~~~~~~~~p~  247 (248)
                      |++.||+.... .....+...+.    .++            ++.++...|++|+++.+|||+.+....+..|.
T Consensus       224 G~v~T~~~~~~-~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdgG~~~~~~~~~~~~  296 (297)
T 1d7o_A          224 GPLGSRAAKAI-GFIDTMIEYSYNNAPIQKTLTADEVGNAAAFLVSPLASAITGATIYVDNGLNSMGVALDSPV  296 (297)
T ss_dssp             CCCBCCCSSCC-SHHHHHHHHHHHHSSSCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGGCSSCTTCTT
T ss_pred             cccccchhhhc-cccHHHHHHhhccCCCCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCceeecCCCCCCC
Confidence            99999986532 11112111111    111            66777788999999999999887666666654

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=99.95  E-value=1.8e-28  Score=201.27  Aligned_cols=174  Identities=16%  Similarity=0.105  Sum_probs=133.7

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC------
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA------   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~------   76 (248)
                      ++++|+++||||+||||+++++.|+++|++|++++|+... .....+.+.....++.++.+|++|.++++++++      
T Consensus        28 ~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~-~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  106 (272)
T 1yb1_A           28 SVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHG-LEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEI  106 (272)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHH-HHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHH-HHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHHC
Confidence            4788999999999999999999999999999999998632 222233333334679999999999999888775      


Q ss_pred             -CCCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHH----hcCCCEEEEEeccceeccCCCCCCCCccCCC
Q 025755           77 -GCTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCV----KAKVKRVVVVSSIGAVMLNPNWPKGQVMDEE  147 (248)
Q Consensus        77 -~id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~----~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~  147 (248)
                       ++|+||||||.......    .+.+...+++|+.++.++++++.    +.+.++||++||..++.+.+.          
T Consensus       107 g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~----------  176 (272)
T 1yb1_A          107 GDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPF----------  176 (272)
T ss_dssp             CCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHHH----------
T ss_pred             CCCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCCC----------
Confidence             68999999998654322    13345789999999887777664    456789999999876544321          


Q ss_pred             CCCchhhhccccchHHHHHHHHHHHHHHHHHh------CCccEEEEccCeeecCCCC
Q 025755          148 CWSDEEFCKATENYYCLAKTIAEIQALEYAKR------GELDIVTVCPSIVIGPMLQ  198 (248)
Q Consensus       148 ~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~------~~i~v~~vrpg~i~g~~~~  198 (248)
                                 ...|+.||++.+.+++.++.+      .++++++|+||++.+++..
T Consensus       177 -----------~~~Y~~sK~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~  222 (272)
T 1yb1_A          177 -----------LLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIK  222 (272)
T ss_dssp             -----------HHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTT
T ss_pred             -----------chhHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCccc
Confidence                       234999998777777666654      3699999999999998743

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=99.95  E-value=1.5e-29  Score=210.02  Aligned_cols=196  Identities=11%  Similarity=-0.057  Sum_probs=150.2

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCC--CCEEEEc
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAG--CTGVFHV   84 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~--id~vi~~   84 (248)
                      |+|+||||+|+||++++++|+ +|++|++++|+..                  ++.+|++|.+++.+++++  +|+|||+
T Consensus         1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~------------------~~~~D~~d~~~~~~~~~~~~~d~vih~   61 (299)
T 1n2s_A            1 MNILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK------------------EFCGDFSNPKGVAETVRKLRPDVIVNA   61 (299)
T ss_dssp             CEEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS------------------SSCCCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             CeEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc------------------cccccCCCHHHHHHHHHhcCCCEEEEC
Confidence            379999999999999999999 8999999998751                  246899999999999986  9999999


Q ss_pred             cccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccccchHHH
Q 025755           85 ACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCL  164 (248)
Q Consensus        85 ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~  164 (248)
                      ||..........+...+++|+.++.++++++++.+. ++||+||... |+...   ..+++|+++..+      .+.|+.
T Consensus        62 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v-y~~~~---~~~~~E~~~~~p------~~~Y~~  130 (299)
T 1n2s_A           62 AAHTAVDKAESEPELAQLLNATSVEAIAKAANETGA-WVVHYSTDYV-FPGTG---DIPWQETDATSP------LNVYGK  130 (299)
T ss_dssp             CCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTTC-EEEEEEEGGG-SCCCT---TCCBCTTSCCCC------SSHHHH
T ss_pred             cccCCHhhhhcCHHHHHHHHHHHHHHHHHHHHHcCC-cEEEEecccE-EeCCC---CCCCCCCCCCCC------ccHHHH
Confidence            997653222345578899999999999999998886 8999999764 44322   456777776544      456999


Q ss_pred             HHHHHHHHHHHHHHhCCccEEEEccCeeecCCCCCCCCccHHHHHHHHcCCCCCCCCCchhhhhhhhhccceeEEEe
Q 025755          165 AKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKGFFFTTPSHSYMLERTLVLNQGVRLYRC  241 (248)
Q Consensus       165 sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~l~vd~g~~~~~~  241 (248)
                      +|..+|.+++.++    .+++++||+++|||...   .....++..+..+..+...++  ...+.+++++...++..
T Consensus       131 sK~~~E~~~~~~~----~~~~ilRp~~v~G~~~~---~~~~~~~~~~~~~~~~~~~~~--~~~~~i~v~Dva~~~~~  198 (299)
T 1n2s_A          131 TKLAGEKALQDNC----PKHLIFRTSWVYAGKGN---NFAKTMLRLAKERQTLSVIND--QYGAPTGAELLADCTAH  198 (299)
T ss_dssp             HHHHHHHHHHHHC----SSEEEEEECSEECSSSC---CHHHHHHHHHHHCSEEEEECS--CEECCEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhC----CCeEEEeeeeecCCCcC---cHHHHHHHHHhcCCCEEeecC--cccCCeeHHHHHHHHHH
Confidence            9999999998875    38999999999999764   245566666666664433332  23445666666554443

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=99.95  E-value=3.3e-28  Score=197.45  Aligned_cols=199  Identities=12%  Similarity=0.013  Sum_probs=149.7

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-------
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-------   76 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-------   76 (248)
                      .++|+++||||+||||+++++.|+++|++|++++|+..+.             .-..+.+|++|.++++++++       
T Consensus        20 ~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~-------------~~~~~~~d~~d~~~v~~~~~~~~~~~g   86 (251)
T 3orf_A           20 HMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPN-------------ADHSFTIKDSGEEEIKSVIEKINSKSI   86 (251)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTT-------------SSEEEECSCSSHHHHHHHHHHHHTTTC
T ss_pred             ccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccc-------------cccceEEEeCCHHHHHHHHHHHHHHcC
Confidence            4579999999999999999999999999999999987521             12357899999999888875       


Q ss_pred             CCCEEEEccccCCCCC-----CCCccccchhhhHHHHHHHHHHHHhc--CCCEEEEEeccceeccCCCCCCCCccCCCCC
Q 025755           77 GCTGVFHVACPVPVGK-----VPNPEVQLIDPAVVGTKNVLNSCVKA--KVKRVVVVSSIGAVMLNPNWPKGQVMDEECW  149 (248)
Q Consensus        77 ~id~vi~~ag~~~~~~-----~~~~~~~~~~~n~~g~~~~~~~~~~~--~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~  149 (248)
                      ++|+||||||......     ..+.+...+++|+.++.++++++.+.  ..++||++||..++.+.+..           
T Consensus        87 ~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~-----------  155 (251)
T 3orf_A           87 KVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAALNRTSGM-----------  155 (251)
T ss_dssp             CEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTB-----------
T ss_pred             CCCEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhhccCCCCC-----------
Confidence            4699999999764332     12345678899999999999999875  33699999998877655432           


Q ss_pred             CchhhhccccchHHHHHHHHHHHHHHHHHh-----CCccEEEEccCeeecCCCCCC-------CCccHHHHHHHHcCCCC
Q 025755          150 SDEEFCKATENYYCLAKTIAEIQALEYAKR-----GELDIVTVCPSIVIGPMLQPT-------INTSSLLLLGFLKGFFF  217 (248)
Q Consensus       150 ~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~-----~~i~v~~vrpg~i~g~~~~~~-------~~~~~~~~~~~~~~~~l  217 (248)
                                ..|+.||++.+.+++.++.+     .++++++|+||.+.+++....       ....+..+.....  ++
T Consensus       156 ----------~~Y~~sKaa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~dva~~i~--~l  223 (251)
T 3orf_A          156 ----------IAYGATKAATHHIIKDLASENGGLPAGSTSLGILPVTLDTPTNRKYMSDANFDDWTPLSEVAEKLF--EW  223 (251)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCHHHHHHCTTSCGGGSBCHHHHHHHHH--HH
T ss_pred             ----------chhHHHHHHHHHHHHHHHHHhcccCCCcEEEEEecCcCcCcchhhhcccccccccCCHHHHHHHHH--HH
Confidence                      34999999988888888876     479999999999999753210       0011222222221  45


Q ss_pred             CCC-CCchhhhhhhhhccceeE
Q 025755          218 TTP-SHSYMLERTLVLNQGVRL  238 (248)
Q Consensus       218 ~~~-~~~~~~g~~l~vd~g~~~  238 (248)
                      ... ...+++|+++.+++|...
T Consensus       224 ~~~~~~~~~tG~~i~v~~g~~~  245 (251)
T 3orf_A          224 STNSDSRPTNGSLVKFETKSKV  245 (251)
T ss_dssp             HHCGGGCCCTTCEEEEEEETTE
T ss_pred             hcCccccCCcceEEEEecCCcc
Confidence            555 678999999999888553

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=99.95  E-value=3.2e-28  Score=196.76  Aligned_cols=204  Identities=14%  Similarity=0.055  Sum_probs=137.2

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCCeEEEE-E--cCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHH-HH---hCCC
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGYMVHGT-V--RDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALC-AA---TAGC   78 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~-~--r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~-~~---~~~i   78 (248)
                      ||+++||||+||||+++++.|+++|++|+++ +  |+.+. .....+.+    ......  |..+.+.+. .+   +.++
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~-~~~~~~~~----~~~~~~--~~~~v~~~~~~~~~~~g~i   73 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAE-RQRFESEN----PGTIAL--AEQKPERLVDATLQHGEAI   73 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHH-HHHHHHHS----TTEEEC--CCCCGGGHHHHHGGGSSCE
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHH-HHHHHHHh----CCCccc--CHHHHHHHHHHHHHHcCCC
Confidence            5899999999999999999999999999999 5  87532 22222222    122222  443333222 22   2368


Q ss_pred             CEEEEccccCCC---CCC----CCccccchhhhHHHHHHHHHHHH----hcCCCEEEEEeccceeccCCCCCCCCccCCC
Q 025755           79 TGVFHVACPVPV---GKV----PNPEVQLIDPAVVGTKNVLNSCV----KAKVKRVVVVSSIGAVMLNPNWPKGQVMDEE  147 (248)
Q Consensus        79 d~vi~~ag~~~~---~~~----~~~~~~~~~~n~~g~~~~~~~~~----~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~  147 (248)
                      |+||||||....   ...    .+.++..+++|+.++.++++++.    +.+.++||++||..++.+.+....       
T Consensus        74 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~-------  146 (244)
T 1zmo_A           74 DTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGKKPLAYNPL-------  146 (244)
T ss_dssp             EEEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTCTT-------
T ss_pred             CEEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhCCCCCCchH-------
Confidence            999999997654   221    23456789999999998888775    446689999999887666554333       


Q ss_pred             CCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCC---CCC--CCccHHHHH-HHHcCC---
Q 025755          148 CWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPML---QPT--INTSSLLLL-GFLKGF---  215 (248)
Q Consensus       148 ~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~---~~~--~~~~~~~~~-~~~~~~---  215 (248)
                                    |+.||++.+.+.+.++.+   .+++|++|+||.+.+++.   ...  ......+.. ....++   
T Consensus       147 --------------Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~  212 (244)
T 1zmo_A          147 --------------YGPARAATVALVESAAKTLSRDGILLYAIGPNFFNNPTYFPTSDWENNPELRERVDRDVPLGRLGR  212 (244)
T ss_dssp             --------------HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCBTTTBCHHHHHHCHHHHHHHHHHCTTCSCBC
T ss_pred             --------------HHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCcccccccccchHHHHHHHhcCCCCCCCcC
Confidence                          999997655555554433   259999999999999975   211  000011111 111111   


Q ss_pred             ---------CCCCCCCchhhhhhhhhcccee
Q 025755          216 ---------FFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       216 ---------~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                               ++.++...|++|+.+.+|||+.
T Consensus       213 pe~vA~~v~~l~s~~~~~~tG~~i~vdgG~~  243 (244)
T 1zmo_A          213 PDEMGALITFLASRRAAPIVGQFFAFTGGYL  243 (244)
T ss_dssp             HHHHHHHHHHHHTTTTGGGTTCEEEESTTCC
T ss_pred             HHHHHHHHHHHcCccccCccCCEEEeCCCCC
Confidence                     6777788999999999999963

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=99.95  E-value=1e-27  Score=194.21  Aligned_cols=166  Identities=16%  Similarity=0.120  Sum_probs=127.0

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-------CCC
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-------GCT   79 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-------~id   79 (248)
                      |+++||||+||||+++++.|+++|++|++++|+... .....+.+   ..++.++.+|++|.++++++++       ++|
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~-~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   76 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQER-LQELKDEL---GDNLYIAQLDVRNRAAIEEMLASLPAEWCNID   76 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHH-HHHHHHHH---CTTEEEEECCTTCHHHHHHHHHTSCTTTCCCC
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHHh---cCceEEEEcCCCCHHHHHHHHHHHHHhCCCCC
Confidence            689999999999999999999999999999998632 22222222   2478899999999999999876       589


Q ss_pred             EEEEccccCC-CC----CCCCccccchhhhHHHHHHHHHHHHh----cCCCEEEEEeccceeccCCCCCCCCccCCCCCC
Q 025755           80 GVFHVACPVP-VG----KVPNPEVQLIDPAVVGTKNVLNSCVK----AKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWS  150 (248)
Q Consensus        80 ~vi~~ag~~~-~~----~~~~~~~~~~~~n~~g~~~~~~~~~~----~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~  150 (248)
                      +||||||... ..    ...+.+...+++|+.|+.++++++.+    .+.++||++||..+..+.+.             
T Consensus        77 ~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~-------------  143 (248)
T 3asu_A           77 ILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAG-------------  143 (248)
T ss_dssp             EEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTT-------------
T ss_pred             EEEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEccchhccCCCC-------------
Confidence            9999999753 11    11234567899999999888888763    46689999999876655432             


Q ss_pred             chhhhccccchHHHHHHHHHHHHHHHHHhC---CccEEEEccCeee-cCCC
Q 025755          151 DEEFCKATENYYCLAKTIAEIQALEYAKRG---ELDIVTVCPSIVI-GPML  197 (248)
Q Consensus       151 ~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~---~i~v~~vrpg~i~-g~~~  197 (248)
                              ...|+.||+..+.+.+.++.+.   |++||+|+||.+. +++.
T Consensus       144 --------~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~gT~~~  186 (248)
T 3asu_A          144 --------GNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFS  186 (248)
T ss_dssp             --------CHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECSBCC----
T ss_pred             --------CchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeccccccCcch
Confidence                    2349999987777777766543   6999999999999 7764

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=99.95  E-value=1.4e-27  Score=196.71  Aligned_cols=175  Identities=15%  Similarity=0.197  Sum_probs=129.3

Q ss_pred             CCCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcC--CCCCeEEEEccCCCHHHHHHHhC---
Q 025755            2 SGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEG--ASENLQLFKTDLLDYEALCAATA---   76 (248)
Q Consensus         2 ~~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~Di~d~~~~~~~~~---   76 (248)
                      .++++|+++||||+||||+++++.|+++|++|++++|+.... ....+.+..  ...++.++.+|++|.++++++++   
T Consensus        28 ~~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  106 (279)
T 1xg5_A           28 ERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNI-EELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIR  106 (279)
T ss_dssp             GGGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHH-HHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHH
Confidence            346789999999999999999999999999999999986422 222222222  12468889999999999888876   


Q ss_pred             ----CCCEEEEccccCCCCCC----CCccccchhhhHHH----HHHHHHHHHhcCC--CEEEEEeccceeccCCCCCCCC
Q 025755           77 ----GCTGVFHVACPVPVGKV----PNPEVQLIDPAVVG----TKNVLNSCVKAKV--KRVVVVSSIGAVMLNPNWPKGQ  142 (248)
Q Consensus        77 ----~id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g----~~~~~~~~~~~~~--~~iV~vSS~~~~~~~~~~~~~~  142 (248)
                          ++|+||||||.......    .+.+...+++|+.+    +..+++.+++.+.  ++||++||..+....+.     
T Consensus       107 ~~~g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~-----  181 (279)
T 1xg5_A          107 SQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPL-----  181 (279)
T ss_dssp             HHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSC-----
T ss_pred             HhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhcccCCC-----
Confidence                68999999997654322    23456789999999    5666677777664  89999999775421110     


Q ss_pred             ccCCCCCCchhhhccccchHHHHHHHHHHHHHHHHH-----hCCccEEEEccCeeecCC
Q 025755          143 VMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAK-----RGELDIVTVCPSIVIGPM  196 (248)
Q Consensus       143 ~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~-----~~~i~v~~vrpg~i~g~~  196 (248)
                                    .+...|+.||++.+.+++.++.     ..++++++|+||.+.+++
T Consensus       182 --------------~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~  226 (279)
T 1xg5_A          182 --------------SVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQF  226 (279)
T ss_dssp             --------------GGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSH
T ss_pred             --------------CCCchhHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchh
Confidence                          0123499999876665555443     346999999999999986

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=99.95  E-value=3.9e-29  Score=202.72  Aligned_cols=172  Identities=21%  Similarity=0.142  Sum_probs=128.7

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC----CCCEE
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA----GCTGV   81 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~----~id~v   81 (248)
                      ||+|+||||+||||++++++|+++|++|++++|+..+...              .+.+|++|.++++++++    ++|+|
T Consensus         1 Mk~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--------------~~~~D~~~~~~~~~~~~~~~~~~d~v   66 (255)
T 2dkn_A            1 MSVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEA--------------DLSTPGGRETAVAAVLDRCGGVLDGL   66 (255)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC--------------CTTSHHHHHHHHHHHHHHHTTCCSEE
T ss_pred             CcEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccc--------------cccCCcccHHHHHHHHHHcCCCccEE
Confidence            4799999999999999999999999999999998642110              15689999999998886    89999


Q ss_pred             EEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhc----CCCEEEEEeccceeccCCCCCCCCccCCCC-CCchh---
Q 025755           82 FHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKA----KVKRVVVVSSIGAVMLNPNWPKGQVMDEEC-WSDEE---  153 (248)
Q Consensus        82 i~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~----~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~-~~~~~---  153 (248)
                      |||||....   ...+...+++|+.++.++++++.+.    +.++||++||..++.+...   ..+..|.. ...++   
T Consensus        67 i~~Ag~~~~---~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~---~~~~~~~~~~~~~~~~~  140 (255)
T 2dkn_A           67 VCCAGVGVT---AANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAA---ELPMVEAMLAGDEARAI  140 (255)
T ss_dssp             EECCCCCTT---SSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTTGG---GCHHHHHHHHTCHHHHH
T ss_pred             EECCCCCCc---chhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEecccccccccc---ccchhhhhcccchhhhh
Confidence            999997652   2456789999999999999987664    5689999999876543311   11111100 00000   


Q ss_pred             ----hhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCC
Q 025755          154 ----FCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPML  197 (248)
Q Consensus       154 ----~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~  197 (248)
                          ....+...|+.||.+.+.+++.++.+   .+++++++|||.++||+.
T Consensus       141 ~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~  191 (255)
T 2dkn_A          141 ELAEQQGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLL  191 (255)
T ss_dssp             HHHHHHCCHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHH
T ss_pred             hhccccCCcchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhh
Confidence                00123466999999888888887765   579999999999999864

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=99.95  E-value=2.5e-28  Score=205.66  Aligned_cols=171  Identities=9%  Similarity=0.046  Sum_probs=125.4

Q ss_pred             CCcEEEEEcCcc--HHHHHHHHHHHHCCCeEEEEEcCC---------CchhhHHhhhhc---CCCCCeEEEEccCCCH--
Q 025755            5 DKERVCVTGAGG--YIASWLVKYLLLKGYMVHGTVRDP---------CDEKNAHLKKLE---GASENLQLFKTDLLDY--   68 (248)
Q Consensus         5 ~~k~vlVtG~~g--~iG~~~~~~l~~~g~~V~~~~r~~---------~~~~~~~~~~~~---~~~~~~~~~~~Di~d~--   68 (248)
                      ++|+++|||+++  |||++++++|+++|++|++.+|+.         +..... .....   .....+.++.+|+++.  
T Consensus         1 ~~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~Dv~~~~~   79 (329)
T 3lt0_A            1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFD-NDMIIDKDKKMNILDMLPFDASFDTA   79 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTT-GGGBCSSSCBCCEEEEEECCTTCSSG
T ss_pred             CCcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHH-HHHHHhhcccccccccccccccccch
Confidence            468999999875  999999999999999999877653         111100 01111   1123478889999877  


Q ss_pred             H------------------HHHHHhC-------CCCEEEEccccCC--CC----CCCCccccchhhhHHHHHHHHHHHHh
Q 025755           69 E------------------ALCAATA-------GCTGVFHVACPVP--VG----KVPNPEVQLIDPAVVGTKNVLNSCVK  117 (248)
Q Consensus        69 ~------------------~~~~~~~-------~id~vi~~ag~~~--~~----~~~~~~~~~~~~n~~g~~~~~~~~~~  117 (248)
                      +                  +++++++       .+|++|||||+..  ..    ...+.|...+++|+.|+.++.+++.+
T Consensus        80 ~~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p  159 (329)
T 3lt0_A           80 NDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVN  159 (329)
T ss_dssp             GGCCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGG
T ss_pred             hhhhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            6                  6666554       5899999999742  11    11244577899999999999999887


Q ss_pred             c--CCCEEEEEeccceeccCCCCC-CCCccCCCCCCchhhhccccchHHHHHH----HHHHHHHHHHHhCCccEEEEccC
Q 025755          118 A--KVKRVVVVSSIGAVMLNPNWP-KGQVMDEECWSDEEFCKATENYYCLAKT----IAEIQALEYAKRGELDIVTVCPS  190 (248)
Q Consensus       118 ~--~~~~iV~vSS~~~~~~~~~~~-~~~~~~e~~~~~~~~~~~~~~~Y~~sK~----~~e~l~~~~~~~~~i~v~~vrpg  190 (248)
                      .  ..++||++||..+..+.+... .                     |+.||+    +++.++.+++++.+|+|++|+||
T Consensus       160 ~m~~~g~Iv~isS~~~~~~~~~~~~~---------------------Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG  218 (329)
T 3lt0_A          160 IMKPQSSIISLTYHASQKVVPGYGGG---------------------MSSAKAALESDTRVLAYHLGRNYNIRINTISAG  218 (329)
T ss_dssp             GEEEEEEEEEEECGGGTSCCTTCTTT---------------------HHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEC
T ss_pred             HHhhCCeEEEEeCccccCCCCcchHH---------------------HHHHHHHHHHHHHHHHHHhCCccCeEEEEEecc
Confidence            6  227999999988776665432 3                     999995    66677777776235999999999


Q ss_pred             eeecCCC
Q 025755          191 IVIGPML  197 (248)
Q Consensus       191 ~i~g~~~  197 (248)
                      .+.+++.
T Consensus       219 ~v~T~~~  225 (329)
T 3lt0_A          219 PLKSRAA  225 (329)
T ss_dssp             CCCCHHH
T ss_pred             eeechhH
Confidence            9999864

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=99.95  E-value=1.1e-28  Score=204.25  Aligned_cols=191  Identities=15%  Similarity=0.016  Sum_probs=144.9

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC--CCCEEEE
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA--GCTGVFH   83 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~--~id~vi~   83 (248)
                      .++||||||+|+||++++++|+++|++|++++|+                      .+|++|.+++.++++  ++|+|||
T Consensus        12 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~----------------------~~Dl~d~~~~~~~~~~~~~d~vih   69 (292)
T 1vl0_A           12 HMKILITGANGQLGREIQKQLKGKNVEVIPTDVQ----------------------DLDITNVLAVNKFFNEKKPNVVIN   69 (292)
T ss_dssp             CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT----------------------TCCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             cceEEEECCCChHHHHHHHHHHhCCCeEEeccCc----------------------cCCCCCHHHHHHHHHhcCCCEEEE
Confidence            5899999999999999999999999999999885                      279999999999998  7999999


Q ss_pred             ccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccccchHH
Q 025755           84 VACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYC  163 (248)
Q Consensus        84 ~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~  163 (248)
                      +||..........+..++++|+.++.++++++.+.+. +|||+||... ++...   ..+++|+++..+      .+.|+
T Consensus        70 ~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~-~iv~~SS~~v-~~~~~---~~~~~E~~~~~~------~~~Y~  138 (292)
T 1vl0_A           70 CAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGA-EIVQISTDYV-FDGEA---KEPITEFDEVNP------QSAYG  138 (292)
T ss_dssp             CCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGG-SCSCC---SSCBCTTSCCCC------CSHHH
T ss_pred             CCccCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEechHHe-ECCCC---CCCCCCCCCCCC------ccHHH
Confidence            9997543211234577899999999999999999887 9999999764 43321   456778776544      45699


Q ss_pred             HHHHHHHHHHHHHHHhCCccEEEEccCeeecCCCCCCCCccHHHHHHHHcCCCCCCCCCchhhhhhhhhccceeEE
Q 025755          164 LAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKGFFFTTPSHSYMLERTLVLNQGVRLY  239 (248)
Q Consensus       164 ~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~l~vd~g~~~~  239 (248)
                      .+|..+|.+++.++    .+++++||+.+||| ..   .....++..+..+..+....+  ...+.+++++...++
T Consensus       139 ~sK~~~E~~~~~~~----~~~~~lR~~~v~G~-~~---~~~~~~~~~~~~~~~~~~~~~--~~~~~i~v~Dva~~~  204 (292)
T 1vl0_A          139 KTKLEGENFVKALN----PKYYIVRTAWLYGD-GN---NFVKTMINLGKTHDELKVVHD--QVGTPTSTVDLARVV  204 (292)
T ss_dssp             HHHHHHHHHHHHHC----SSEEEEEECSEESS-SS---CHHHHHHHHHHHCSEEEEESS--CEECCEEHHHHHHHH
T ss_pred             HHHHHHHHHHHhhC----CCeEEEeeeeeeCC-Cc---ChHHHHHHHHhcCCcEEeecC--eeeCCccHHHHHHHH
Confidence            99999999998875    46899999999999 32   244555566665554322222  223445566554443

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.95  E-value=3.5e-27  Score=187.76  Aligned_cols=166  Identities=13%  Similarity=0.020  Sum_probs=129.0

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEEccc
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFHVAC   86 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~~ag   86 (248)
                      |+|+||||+|+||++++++|+++|++|++++|+..+.     ..+.  ..++.++.+|++|.++  +.++++|+||||||
T Consensus         1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~-----~~~~--~~~~~~~~~D~~d~~~--~~~~~~d~vi~~ag   71 (224)
T 3h2s_A            1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKA-----ADRL--GATVATLVKEPLVLTE--ADLDSVDAVVDALS   71 (224)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH-----HHHT--CTTSEEEECCGGGCCH--HHHTTCSEEEECCC
T ss_pred             CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEeccccc-----cccc--CCCceEEecccccccH--hhcccCCEEEECCc
Confidence            3799999999999999999999999999999986321     1111  2578999999999887  77889999999999


Q ss_pred             cCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccccchHHHHH
Q 025755           87 PVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAK  166 (248)
Q Consensus        87 ~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK  166 (248)
                      ....       ....+.|+.++.++++++++.+ +++|++||.+++++.+... ..+.+|+..+      .+.+.|+.+|
T Consensus        72 ~~~~-------~~~~~~n~~~~~~l~~a~~~~~-~~~v~~SS~~~~~~~~~~~-~~~~~~~~~~------~~~~~y~~sK  136 (224)
T 3h2s_A           72 VPWG-------SGRGYLHLDFATHLVSLLRNSD-TLAVFILGSASLAMPGADH-PMILDFPESA------ASQPWYDGAL  136 (224)
T ss_dssp             CCTT-------SSCTHHHHHHHHHHHHTCTTCC-CEEEEECCGGGSBCTTCSS-CGGGGCCGGG------GGSTTHHHHH
T ss_pred             cCCC-------cchhhHHHHHHHHHHHHHHHcC-CcEEEEecceeeccCCCCc-cccccCCCCC------ccchhhHHHH
Confidence            8621       1235789999999999999999 9999999987777654311 1233333322      2345699999


Q ss_pred             HHHHHHHHHHHHhCCccEEEEccCeeecCCC
Q 025755          167 TIAEIQALEYAKRGELDIVTVCPSIVIGPML  197 (248)
Q Consensus       167 ~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~  197 (248)
                      ...|.+ ..+..+.+++++++|||.+|||..
T Consensus       137 ~~~e~~-~~~~~~~~i~~~ivrp~~v~g~~~  166 (224)
T 3h2s_A          137 YQYYEY-QFLQMNANVNWIGISPSEAFPSGP  166 (224)
T ss_dssp             HHHHHH-HHHTTCTTSCEEEEEECSBCCCCC
T ss_pred             HHHHHH-HHHHhcCCCcEEEEcCccccCCCc
Confidence            999955 455555679999999999999844

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=99.95  E-value=2.2e-27  Score=198.93  Aligned_cols=208  Identities=13%  Similarity=0.034  Sum_probs=143.1

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCC--------CchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHH
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDP--------CDEKNAHLKKLEGASENLQLFKTDLLDYEALCAA   74 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~   74 (248)
                      ++++|+++||||+||||+++++.|+++|++|++.+++.        .+......+.+......   ..+|+.|.++++++
T Consensus         6 ~l~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~---~~~D~~~~~~~~~~   82 (319)
T 1gz6_A            6 RFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGK---AVANYDSVEAGEKL   82 (319)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCE---EEEECCCGGGHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCCe---EEEeCCCHHHHHHH
Confidence            47889999999999999999999999999999976531        11122222333222222   35899998877665


Q ss_pred             hC-------CCCEEEEccccCCCCC----CCCccccchhhhHHHHHHHHHHHHh----cCCCEEEEEeccceeccCCCCC
Q 025755           75 TA-------GCTGVFHVACPVPVGK----VPNPEVQLIDPAVVGTKNVLNSCVK----AKVKRVVVVSSIGAVMLNPNWP  139 (248)
Q Consensus        75 ~~-------~id~vi~~ag~~~~~~----~~~~~~~~~~~n~~g~~~~~~~~~~----~~~~~iV~vSS~~~~~~~~~~~  139 (248)
                      ++       ++|+||||||+.....    ..+.++..+++|+.|+.++++++.+    .+.++||++||..+.++.+.. 
T Consensus        83 ~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~grIV~vsS~~~~~~~~~~-  161 (319)
T 1gz6_A           83 VKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFGQ-  161 (319)
T ss_dssp             HHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTC-
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCCCC-
Confidence            43       6899999999865431    1234567899999999888888744    466899999998777765432 


Q ss_pred             CCCccCCCCCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCCCCCCccHHHHHHHHcCC-
Q 025755          140 KGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKGF-  215 (248)
Q Consensus       140 ~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~~~-  215 (248)
                                          ..|+.||++.+.+.+.++.+   .||++|+|+||.+ +++.....  ............ 
T Consensus       162 --------------------~~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~-t~~~~~~~--~~~~~~~~~p~dv  218 (319)
T 1gz6_A          162 --------------------ANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG-SRMTETVM--PEDLVEALKPEYV  218 (319)
T ss_dssp             --------------------HHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC-STTTGGGS--CHHHHHHSCGGGT
T ss_pred             --------------------HHHHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc-cccccccC--ChhhhccCCHHHH
Confidence                                33999998777776666654   2699999999998 65532211  111111110000 


Q ss_pred             -----CCCCCCCchhhhhhhhhccceeE
Q 025755          216 -----FFTTPSHSYMLERTLVLNQGVRL  238 (248)
Q Consensus       216 -----~l~~~~~~~~~g~~l~vd~g~~~  238 (248)
                           ++..+ ..+++|+++.+|||+..
T Consensus       219 A~~~~~l~s~-~~~~tG~~~~v~GG~~~  245 (319)
T 1gz6_A          219 APLVLWLCHE-SCEENGGLFEVGAGWIG  245 (319)
T ss_dssp             HHHHHHHTST-TCCCCSCEEEEETTEEE
T ss_pred             HHHHHHHhCc-hhhcCCCEEEECCCeEE
Confidence                 44444 45789999999999764

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=99.95  E-value=5.8e-27  Score=191.74  Aligned_cols=168  Identities=17%  Similarity=0.111  Sum_probs=127.5

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCC--CCCeEEEEccCCCHHHHHHHhC-----
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGA--SENLQLFKTDLLDYEALCAATA-----   76 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Di~d~~~~~~~~~-----   76 (248)
                      +++|+++||||+||||+++++.|+++|++|++++|+.... ....+.+...  ..++.++.+|++|.++++++++     
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~-~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   83 (267)
T 2gdz_A            5 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAG-VQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDH   83 (267)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHH-HHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHH
Confidence            5789999999999999999999999999999999986422 2222223221  3468899999999999888775     


Q ss_pred             --CCCEEEEccccCCCCCCCCccccchhhhHHHHHHHH----HHHHhcC---CCEEEEEeccceeccCCCCCCCCccCCC
Q 025755           77 --GCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVL----NSCVKAK---VKRVVVVSSIGAVMLNPNWPKGQVMDEE  147 (248)
Q Consensus        77 --~id~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~----~~~~~~~---~~~iV~vSS~~~~~~~~~~~~~~~~~e~  147 (248)
                        ++|+||||||...    .+.|...+++|+.++.++.    +.+++.+   .++||++||..++.+.+..         
T Consensus        84 ~g~id~lv~~Ag~~~----~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~---------  150 (267)
T 2gdz_A           84 FGRLDILVNNAGVNN----EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQ---------  150 (267)
T ss_dssp             HSCCCEEEECCCCCC----SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTC---------
T ss_pred             cCCCCEEEECCCCCC----hhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCCCCCC---------
Confidence              4799999999764    3567889999999765554    4444432   5799999998766544322         


Q ss_pred             CCCchhhhccccchHHHHHHHHHHHHHHHH-----HhCCccEEEEccCeeecCCC
Q 025755          148 CWSDEEFCKATENYYCLAKTIAEIQALEYA-----KRGELDIVTVCPSIVIGPML  197 (248)
Q Consensus       148 ~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~-----~~~~i~v~~vrpg~i~g~~~  197 (248)
                                  ..|+.||+..+.+.+.++     ...++||++|+||.+.+|+.
T Consensus       151 ------------~~Y~~sK~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~~~  193 (267)
T 2gdz_A          151 ------------PVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAIL  193 (267)
T ss_dssp             ------------HHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHH
T ss_pred             ------------chHHHHHHHHHHHHHHHHHHHHhccCCcEEEEEecCcCcchhh
Confidence                        239999987777766531     23469999999999999863

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.95  E-value=1.3e-27  Score=192.48  Aligned_cols=158  Identities=16%  Similarity=0.092  Sum_probs=129.5

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCC--eEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEE
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGY--MVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGV   81 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~v   81 (248)
                      +++|+|+||||+||||++++++|+++|+  +|++++|+........       ..++.++.+|++|.+++.++++++|+|
T Consensus        16 m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~-------~~~~~~~~~D~~d~~~~~~~~~~~d~v   88 (242)
T 2bka_A           16 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA-------YKNVNQEVVDFEKLDDYASAFQGHDVG   88 (242)
T ss_dssp             HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG-------GGGCEEEECCGGGGGGGGGGGSSCSEE
T ss_pred             hcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccc-------cCCceEEecCcCCHHHHHHHhcCCCEE
Confidence            4678999999999999999999999999  9999999875322111       135788999999999999999999999


Q ss_pred             EEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccccch
Q 025755           82 FHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENY  161 (248)
Q Consensus        82 i~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~  161 (248)
                      |||||.....   ..+..++++|+.++.++++++++.+.++||++||..++. .+                      ...
T Consensus        89 i~~ag~~~~~---~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS~~~~~-~~----------------------~~~  142 (242)
T 2bka_A           89 FCCLGTTRGK---AGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADK-SS----------------------NFL  142 (242)
T ss_dssp             EECCCCCHHH---HHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCT-TC----------------------SSH
T ss_pred             EECCCccccc---CCcccceeeeHHHHHHHHHHHHHCCCCEEEEEccCcCCC-CC----------------------cch
Confidence            9999975331   234678899999999999999999889999999976432 11                      134


Q ss_pred             HHHHHHHHHHHHHHHHHhCCc-cEEEEccCeeecCCCC
Q 025755          162 YCLAKTIAEIQALEYAKRGEL-DIVTVCPSIVIGPMLQ  198 (248)
Q Consensus       162 Y~~sK~~~e~l~~~~~~~~~i-~v~~vrpg~i~g~~~~  198 (248)
                      |+.+|...|.+++.+    ++ +++++|||.++||...
T Consensus       143 Y~~sK~~~e~~~~~~----~~~~~~~vrpg~v~~~~~~  176 (242)
T 2bka_A          143 YLQVKGEVEAKVEEL----KFDRYSVFRPGVLLCDRQE  176 (242)
T ss_dssp             HHHHHHHHHHHHHTT----CCSEEEEEECCEEECTTGG
T ss_pred             HHHHHHHHHHHHHhc----CCCCeEEEcCceecCCCCC
Confidence            999999999887653    47 6999999999999754

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=99.95  E-value=1e-27  Score=200.76  Aligned_cols=216  Identities=13%  Similarity=0.050  Sum_probs=141.9

Q ss_pred             CCCcEEEEEcC--ccHHHHHHHHHHHHCCCeEEEEEcCCC---------chhhHHhhhhcCCC--CCeEEEEccC-----
Q 025755            4 EDKERVCVTGA--GGYIASWLVKYLLLKGYMVHGTVRDPC---------DEKNAHLKKLEGAS--ENLQLFKTDL-----   65 (248)
Q Consensus         4 l~~k~vlVtG~--~g~iG~~~~~~l~~~g~~V~~~~r~~~---------~~~~~~~~~~~~~~--~~~~~~~~Di-----   65 (248)
                      |++|+++||||  ++|||+++++.|+++|++|++++|+..         .......+.+....  ....++.+|+     
T Consensus         7 l~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~   86 (315)
T 2o2s_A            7 LRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKLPDGSLIEFAGVYPLDAAFDKP   86 (315)
T ss_dssp             CTTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHHHBCTTSCBCCCSCEEECCTTCSST
T ss_pred             CCCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhhhhhhcccccccccccccccccccc
Confidence            67899999999  899999999999999999999987520         00011112221100  0124444443     


Q ss_pred             -------CC--------HHHHHHHhC-------CCCEEEEccccCC--CC----CCCCccccchhhhHHHHHHHHHHHHh
Q 025755           66 -------LD--------YEALCAATA-------GCTGVFHVACPVP--VG----KVPNPEVQLIDPAVVGTKNVLNSCVK  117 (248)
Q Consensus        66 -------~d--------~~~~~~~~~-------~id~vi~~ag~~~--~~----~~~~~~~~~~~~n~~g~~~~~~~~~~  117 (248)
                             +|        .++++++++       ++|+||||||...  ..    ...+.|...+++|+.++.++++++.+
T Consensus        87 ~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~  166 (315)
T 2o2s_A           87 EDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQHFGP  166 (315)
T ss_dssp             TSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHST
T ss_pred             chhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHH
Confidence                   32        334555443       6899999999653  11    11234567899999999999999987


Q ss_pred             c--CCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccccchHHHHHH----HHHHHHHHHHHhCCccEEEEccCe
Q 025755          118 A--KVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAKT----IAEIQALEYAKRGELDIVTVCPSI  191 (248)
Q Consensus       118 ~--~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~----~~e~l~~~~~~~~~i~v~~vrpg~  191 (248)
                      .  ..++||++||..+..+.+...                    ..|+.||+    +++.++.++++..||+||+|+||.
T Consensus       167 ~m~~~g~Iv~isS~~~~~~~~~~~--------------------~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~  226 (315)
T 2o2s_A          167 IMNEGGSAVTLSYLAAERVVPGYG--------------------GGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGP  226 (315)
T ss_dssp             TEEEEEEEEEEEEGGGTSCCTTCC--------------------TTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECC
T ss_pred             HHhcCCEEEEEecccccccCCCcc--------------------HHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEeccc
Confidence            5  237999999987766554321                    12999997    555555666543469999999999


Q ss_pred             eecCCCCCCC-----CccHHHHH----HHHcCC------------CCCCCCCchhhhhhhhhccceeEE
Q 025755          192 VIGPMLQPTI-----NTSSLLLL----GFLKGF------------FFTTPSHSYMLERTLVLNQGVRLY  239 (248)
Q Consensus       192 i~g~~~~~~~-----~~~~~~~~----~~~~~~------------~l~~~~~~~~~g~~l~vd~g~~~~  239 (248)
                      +.+++.....     ........    ....++            |+.++...|+||+++.+|||+.+.
T Consensus       227 v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~~  295 (315)
T 2o2s_A          227 LKSRAASAIGKSGEKSFIDYAIDYSYNNAPLRRDLHSDDVGGAALFLLSPLARAVSGVTLYVDNGLHAM  295 (315)
T ss_dssp             CCCHHHHHTTCSSSSCHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGGC
T ss_pred             ccchhhhhccccccchhHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhCchhccCcCCEEEECCCeeee
Confidence            9997532110     01011111    111111            677777899999999999998754

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.94  E-value=8.7e-27  Score=184.92  Aligned_cols=161  Identities=17%  Similarity=0.242  Sum_probs=119.8

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEEccc
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFHVAC   86 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~~ag   86 (248)
                      |+|+||||+|+||++++++|+++|++|++++|+..+.     ..+.   .++.++.+|++|.++  +.++++|+||||||
T Consensus         1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~-----~~~~---~~~~~~~~D~~d~~~--~~~~~~d~vi~~ag   70 (221)
T 3ew7_A            1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKI-----TQTH---KDINILQKDIFDLTL--SDLSDQNVVVDAYG   70 (221)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHH-----HHHC---SSSEEEECCGGGCCH--HHHTTCSEEEECCC
T ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhh-----hhcc---CCCeEEeccccChhh--hhhcCCCEEEECCc
Confidence            4799999999999999999999999999999986421     1111   578999999999887  77889999999999


Q ss_pred             cCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccccchHHHHH
Q 025755           87 PVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAK  166 (248)
Q Consensus        87 ~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK  166 (248)
                      ....         ..+.|+.++.++++++++.+.+++|++||..++++.+.   ..+..|+.+..+      .+.|+.+|
T Consensus        71 ~~~~---------~~~~~~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~---~~~~~~~~~~~~------~~~y~~~k  132 (221)
T 3ew7_A           71 ISPD---------EAEKHVTSLDHLISVLNGTVSPRLLVVGGAASLQIDED---GNTLLESKGLRE------APYYPTAR  132 (221)
T ss_dssp             SSTT---------TTTSHHHHHHHHHHHHCSCCSSEEEEECCCC----------------------------CCCSCCHH
T ss_pred             CCcc---------ccchHHHHHHHHHHHHHhcCCceEEEEecceEEEcCCC---CccccccCCCCC------HHHHHHHH
Confidence            7432         25679999999999999998899999999887776643   223344443332      45599999


Q ss_pred             HHHHHHHHHHHH-hCCccEEEEccCeeecCC
Q 025755          167 TIAEIQALEYAK-RGELDIVTVCPSIVIGPM  196 (248)
Q Consensus       167 ~~~e~l~~~~~~-~~~i~v~~vrpg~i~g~~  196 (248)
                      ...|.+. .+.. +.+++++++||+.+|||.
T Consensus       133 ~~~e~~~-~~~~~~~gi~~~ivrp~~v~g~~  162 (221)
T 3ew7_A          133 AQAKQLE-HLKSHQAEFSWTYISPSAMFEPG  162 (221)
T ss_dssp             HHHHHHH-HHHTTTTTSCEEEEECSSCCCCC
T ss_pred             HHHHHHH-HHHhhccCccEEEEeCcceecCC
Confidence            9999873 3443 567999999999999984

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=99.94  E-value=1.3e-27  Score=212.46  Aligned_cols=228  Identities=16%  Similarity=0.122  Sum_probs=161.3

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchh--hHHhhhh---------cCCCCCeEEEEccCCCHHHHHH
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEK--NAHLKKL---------EGASENLQLFKTDLLDYEALCA   73 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~--~~~~~~~---------~~~~~~~~~~~~Di~d~~~~~~   73 (248)
                      .+|+|+||||||+||++++++|++.|++|++++|+.....  ....+.+         .....++.++.+|+.|.+.+. 
T Consensus       149 ~~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~-  227 (508)
T 4f6l_B          149 PLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV-  227 (508)
T ss_dssp             CCEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC-
T ss_pred             CCCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC-
Confidence            4689999999999999999999999999999999875211  1111111         112468999999999987777 


Q ss_pred             HhCCCCEEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCC--CCCCCccCCCCCCc
Q 025755           74 ATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPN--WPKGQVMDEECWSD  151 (248)
Q Consensus        74 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~--~~~~~~~~e~~~~~  151 (248)
                      +..++|+|||||+....   ..++..++++|+.++.+++++|.+ +.+++||+||..+  +...  .....+++|+++..
T Consensus       228 ~~~~~D~Vih~Aa~~~~---~~~~~~~~~~Nv~gt~~ll~~a~~-~~~~~v~iSS~~v--G~~~~~~~~~~~~~E~~~~~  301 (508)
T 4f6l_B          228 LPENMDTIIHAGARTDH---FGDDDEFEKVNVQGTVDVIRLAQQ-HHARLIYVSTISV--GTYFDIDTEDVTFSEADVYK  301 (508)
T ss_dssp             CSSCCSEEEECCCC-----------CCHHHHHHHHHHHHHHHHT-TTCEEEEEEESCT--TSEECTTCSCCEECTTCSCS
T ss_pred             CccCCCEEEECCceecC---CCCHHHHhhhHHHHHHHHHHHHHh-CCCcEEEeCChhh--ccCCccCCcCcccccccccc
Confidence            77899999999997643   345578899999999999999998 6789999999775  2211  12245677777643


Q ss_pred             hhhhccccchHHHHHHHHHHHHHHHHHhCCccEEEEccCeeecCCCCCC------CCccHHHHHHHHcCCCCCCCCCchh
Q 025755          152 EEFCKATENYYCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPT------INTSSLLLLGFLKGFFFTTPSHSYM  225 (248)
Q Consensus       152 ~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~------~~~~~~~~~~~~~~~~l~~~~~~~~  225 (248)
                      +   ..+.+.|+.+|..+|.++..+++ .|++++++|||.+|||.....      ......++.....+..+... .+..
T Consensus       302 ~---~~~~~~Y~~sK~~~E~~~~~~~~-~gi~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~g~~  376 (508)
T 4f6l_B          302 G---QLLTSPYTRSKFYSELKVLEAVN-NGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGVS-MAEM  376 (508)
T ss_dssp             S---BCCCSHHHHHHHHHHHHHHHHHH-TTCEEEEEEECCEESCSSSCCCCTTCTTCHHHHHHHHHTTCSEEETT-GGGS
T ss_pred             c---ccCCCcHHHHHHHHHHHHHHHHH-cCCCEEEEecceeccCCCCCcccCCcchHHHHHHHHHHHHcCCCCCC-ccCc
Confidence            2   12567799999999999999876 469999999999999976543      12245566666655433321 2233


Q ss_pred             hhhhhhhccceeEEEeecc
Q 025755          226 LERTLVLNQGVRLYRCKIQ  244 (248)
Q Consensus       226 ~g~~l~vd~g~~~~~~~~~  244 (248)
                      ..+.+++|+...++..++.
T Consensus       377 ~~~~v~v~DvA~ai~~~~~  395 (508)
T 4f6l_B          377 PVDFSFVDTTARQIVALAQ  395 (508)
T ss_dssp             EEECEEHHHHHHHHHHHTT
T ss_pred             eEEEEcHHHHHHHHHHHHh
Confidence            4456777777665555444

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=99.94  E-value=2.2e-27  Score=186.76  Aligned_cols=161  Identities=17%  Similarity=0.071  Sum_probs=128.8

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC---CCCEEEE
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA---GCTGVFH   83 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~---~id~vi~   83 (248)
                      |+++||||+||||++++++|+++  +|++++|+.... ....+.+.    . .++.+|++|.++++++++   ++|+|||
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~-~~~~~~~~----~-~~~~~D~~~~~~~~~~~~~~~~id~vi~   72 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGAL-AELAREVG----A-RALPADLADELEAKALLEEAGPLDLLVH   72 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHH-HHHHHHHT----C-EECCCCTTSHHHHHHHHHHHCSEEEEEE
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHH-HHHHHhcc----C-cEEEeeCCCHHHHHHHHHhcCCCCEEEE
Confidence            58999999999999999999998  999999976322 22222221    1 788999999999999988   8999999


Q ss_pred             ccccCCCCC----CCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhcccc
Q 025755           84 VACPVPVGK----VPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATE  159 (248)
Q Consensus        84 ~ag~~~~~~----~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~  159 (248)
                      |||......    ..+.+...+++|+.++.++++++++.+.++||++||..++.+.+.                     .
T Consensus        73 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~sS~~~~~~~~~---------------------~  131 (207)
T 2yut_A           73 AVGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHARFQKGARAVFFGAYPRYVQVPG---------------------F  131 (207)
T ss_dssp             CCCCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCHHHHSSTT---------------------B
T ss_pred             CCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHhcCCcEEEEEcChhhccCCCC---------------------c
Confidence            999765432    234567789999999999999997767789999999876654432                     2


Q ss_pred             chHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCC
Q 025755          160 NYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPM  196 (248)
Q Consensus       160 ~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~  196 (248)
                      ..|+.+|+..+.+++.++.+   .+++++++|||.++|++
T Consensus       132 ~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~t~~  171 (207)
T 2yut_A          132 AAYAAAKGALEAYLEAARKELLREGVHLVLVRLPAVATGL  171 (207)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEECCCCBCSGG
T ss_pred             chHHHHHHHHHHHHHHHHHHHhhhCCEEEEEecCcccCCC
Confidence            34999999888888777765   47999999999999986

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.94  E-value=1.6e-26  Score=186.86  Aligned_cols=167  Identities=20%  Similarity=0.195  Sum_probs=128.1

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHC--CCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEE
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLK--GYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGV   81 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~v   81 (248)
                      +++|+|+||||+|+||+++++.|+++  |++|++++|+....     ..+   ..++.++.+|++|.+++.++++++|+|
T Consensus         2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~-----~~~---~~~~~~~~~D~~d~~~~~~~~~~~d~v   73 (253)
T 1xq6_A            2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGK-----EKI---GGEADVFIGDITDADSINPAFQGIDAL   73 (253)
T ss_dssp             CSCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHH-----HHT---TCCTTEEECCTTSHHHHHHHHTTCSEE
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCch-----hhc---CCCeeEEEecCCCHHHHHHHHcCCCEE
Confidence            56799999999999999999999999  89999999975321     111   346778999999999999999999999


Q ss_pred             EEccccCCCCC----------C---CCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCC
Q 025755           82 FHVACPVPVGK----------V---PNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEEC  148 (248)
Q Consensus        82 i~~ag~~~~~~----------~---~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~  148 (248)
                      |||||......          .   .+.+...+++|+.++.++++++++.+.++||++||..+....            .
T Consensus        74 i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~------------~  141 (253)
T 1xq6_A           74 VILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNPD------------H  141 (253)
T ss_dssp             EECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTCTT------------C
T ss_pred             EEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcCCCEEEEEcCccCCCCC------------C
Confidence            99999754211          0   112234679999999999999999888999999997642111            1


Q ss_pred             CCchhhhccccchHHHHHHHHHHHHHHHHHhCCccEEEEccCeeecCCCC
Q 025755          149 WSDEEFCKATENYYCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQ  198 (248)
Q Consensus       149 ~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~  198 (248)
                      +..+   . ....|+.+|...|.+++.    .+++++++|||.++|+...
T Consensus       142 ~~~~---~-~~~~y~~sK~~~e~~~~~----~~i~~~~vrpg~v~~~~~~  183 (253)
T 1xq6_A          142 PLNK---L-GNGNILVWKRKAEQYLAD----SGTPYTIIRAGGLLDKEGG  183 (253)
T ss_dssp             GGGG---G-GGCCHHHHHHHHHHHHHT----SSSCEEEEEECEEECSCSS
T ss_pred             cccc---c-cchhHHHHHHHHHHHHHh----CCCceEEEecceeecCCcc
Confidence            1110   0 012388899998887653    5799999999999998643

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=99.94  E-value=1e-26  Score=195.68  Aligned_cols=173  Identities=20%  Similarity=0.163  Sum_probs=129.5

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhh--HHhhhh---cCCCCCeEEEEccCCCHHHHHHHhCC--
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKN--AHLKKL---EGASENLQLFKTDLLDYEALCAATAG--   77 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~--~~~~~~---~~~~~~~~~~~~Di~d~~~~~~~~~~--   77 (248)
                      ++|+++||||+||||++++++|+++|++|++++|+..+...  ...+..   .....++.++.+|++|.++++++++.  
T Consensus         1 ~~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   80 (327)
T 1jtv_A            1 ARTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVT   80 (327)
T ss_dssp             CCEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHh
Confidence            47899999999999999999999999999988876543221  111111   11235789999999999999999875  


Q ss_pred             ---CCEEEEccccCCCCC----CCCccccchhhhHHHHHHHHHHHH----hcCCCEEEEEeccceeccCCCCCCCCccCC
Q 025755           78 ---CTGVFHVACPVPVGK----VPNPEVQLIDPAVVGTKNVLNSCV----KAKVKRVVVVSSIGAVMLNPNWPKGQVMDE  146 (248)
Q Consensus        78 ---id~vi~~ag~~~~~~----~~~~~~~~~~~n~~g~~~~~~~~~----~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e  146 (248)
                         +|+||||||......    ..+.+..++++|+.++.++++++.    +.+.++||++||..++.+.+..        
T Consensus        81 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~IV~isS~~~~~~~~~~--------  152 (327)
T 1jtv_A           81 EGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFN--------  152 (327)
T ss_dssp             TSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCTTC--------
T ss_pred             cCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCcccccCCCCC--------
Confidence               899999999754321    123456789999999999998864    3467899999998776654332        


Q ss_pred             CCCCchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCC
Q 025755          147 ECWSDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQ  198 (248)
Q Consensus       147 ~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~  198 (248)
                                   ..|+.||++.+.+.+.++.+   .+++|++|+||.+.+++..
T Consensus       153 -------------~~Y~aSK~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~~~~  194 (327)
T 1jtv_A          153 -------------DVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFME  194 (327)
T ss_dssp             -------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC----
T ss_pred             -------------hHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccChHHh
Confidence                         34999998776666666542   4699999999999999754

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=99.94  E-value=1.1e-26  Score=191.93  Aligned_cols=171  Identities=14%  Similarity=0.035  Sum_probs=128.9

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCC-CCCeEEEEccCCCHHHHHHHhC------
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGA-SENLQLFKTDLLDYEALCAATA------   76 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Di~d~~~~~~~~~------   76 (248)
                      +++|+++||||+||||+++++.|+++|++|++++|+.... ....+.+... ..++.++.+|++|.++++++++      
T Consensus        26 ~~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~  104 (286)
T 1xu9_A           26 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETL-QKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLM  104 (286)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHH-HHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHHc
Confidence            5789999999999999999999999999999999986432 2222222211 2368899999999998888775      


Q ss_pred             -CCCEEEEc-cccCCCCCC---CCccccchhhhHHHHHHHHHHHHhc---CCCEEEEEeccceeccCCCCCCCCccCCCC
Q 025755           77 -GCTGVFHV-ACPVPVGKV---PNPEVQLIDPAVVGTKNVLNSCVKA---KVKRVVVVSSIGAVMLNPNWPKGQVMDEEC  148 (248)
Q Consensus        77 -~id~vi~~-ag~~~~~~~---~~~~~~~~~~n~~g~~~~~~~~~~~---~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~  148 (248)
                       ++|+|||| ||.......   .+.+...+++|+.|+.++++++.+.   +.++||++||..+..+.+.           
T Consensus       105 g~iD~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~-----------  173 (286)
T 1xu9_A          105 GGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPM-----------  173 (286)
T ss_dssp             TSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSCCTT-----------
T ss_pred             CCCCEEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHCCCEEEEECCcccccCCCC-----------
Confidence             68999999 565433211   2334668999999999998888653   3479999999876554432           


Q ss_pred             CCchhhhccccchHHHHHHHHHHHHHHHHHh-----CCccEEEEccCeeecCC
Q 025755          149 WSDEEFCKATENYYCLAKTIAEIQALEYAKR-----GELDIVTVCPSIVIGPM  196 (248)
Q Consensus       149 ~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~-----~~i~v~~vrpg~i~g~~  196 (248)
                                ...|+.||++.+.+++.++.+     .++++++++||.+.+++
T Consensus       174 ----------~~~Y~asK~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~  216 (286)
T 1xu9_A          174 ----------VAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTET  216 (286)
T ss_dssp             ----------CHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHH
T ss_pred             ----------ccHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeecCccCChh
Confidence                      234999998766666555433     37999999999999975

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=99.94  E-value=7.3e-27  Score=183.27  Aligned_cols=150  Identities=14%  Similarity=0.105  Sum_probs=123.6

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCC---CCEEEE
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAG---CTGVFH   83 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~---id~vi~   83 (248)
                      |+++||||+||||++++++|+ +|++|++++|+..                  .+.+|++|.+++++++++   +|+|||
T Consensus         4 M~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~------------------~~~~D~~~~~~~~~~~~~~~~~d~vi~   64 (202)
T 3d7l_A            4 MKILLIGASGTLGSAVKERLE-KKAEVITAGRHSG------------------DVTVDITNIDSIKKMYEQVGKVDAIVS   64 (202)
T ss_dssp             CEEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS------------------SEECCTTCHHHHHHHHHHHCCEEEEEE
T ss_pred             cEEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc------------------ceeeecCCHHHHHHHHHHhCCCCEEEE
Confidence            389999999999999999999 9999999998752                  468999999999988875   899999


Q ss_pred             ccccCCCCCC----CCccccchhhhHHHHHHHHHHHHhc--CCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhcc
Q 025755           84 VACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCVKA--KVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKA  157 (248)
Q Consensus        84 ~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~~~--~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~  157 (248)
                      |||.......    .+.+...+++|+.++.++++++.+.  +.++||++||..+..+.+.                    
T Consensus        65 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~~--------------------  124 (202)
T 3d7l_A           65 ATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDKGSFTLTTGIMMEDPIVQ--------------------  124 (202)
T ss_dssp             CCCCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEEEEEEEECCGGGTSCCTT--------------------
T ss_pred             CCCCCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccCCEEEEEcchhhcCCCCc--------------------
Confidence            9997643321    2334567899999999999999886  1279999999765444322                    


Q ss_pred             ccchHHHHHHHHHHHHHHHHHhC--CccEEEEccCeeecCC
Q 025755          158 TENYYCLAKTIAEIQALEYAKRG--ELDIVTVCPSIVIGPM  196 (248)
Q Consensus       158 ~~~~Y~~sK~~~e~l~~~~~~~~--~i~v~~vrpg~i~g~~  196 (248)
                       ...|+.+|...+.+++.++.+.  +++++++|||.++|++
T Consensus       125 -~~~Y~~sK~~~~~~~~~~~~e~~~gi~v~~v~pg~v~~~~  164 (202)
T 3d7l_A          125 -GASAAMANGAVTAFAKSAAIEMPRGIRINTVSPNVLEESW  164 (202)
T ss_dssp             -CHHHHHHHHHHHHHHHHHTTSCSTTCEEEEEEECCBGGGH
T ss_pred             -cHHHHHHHHHHHHHHHHHHHHccCCeEEEEEecCccCCch
Confidence             2349999999999999988653  7999999999999985

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=99.94  E-value=6.1e-27  Score=196.43  Aligned_cols=216  Identities=11%  Similarity=0.050  Sum_probs=124.7

Q ss_pred             CCCcEEEEEcC--ccHHHHHHHHHHHHCCCeEEEEEcCC-----------Cchhh----------HHhhhhcCCCC---C
Q 025755            4 EDKERVCVTGA--GGYIASWLVKYLLLKGYMVHGTVRDP-----------CDEKN----------AHLKKLEGASE---N   57 (248)
Q Consensus         4 l~~k~vlVtG~--~g~iG~~~~~~l~~~g~~V~~~~r~~-----------~~~~~----------~~~~~~~~~~~---~   57 (248)
                      |++|+++||||  ++|||+++++.|+++|++|++++|+.           .....          ...+++.....   .
T Consensus         7 l~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (319)
T 2ptg_A            7 LRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPVDLVF   86 (319)
T ss_dssp             CTTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC--------------------------------CC
T ss_pred             cCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhccccccc
Confidence            67899999999  89999999999999999999998642           10000          00111111110   1


Q ss_pred             eEEEEccC------------CC--------HHHHHHHhC-------CCCEEEEccccCC--CC----CCCCccccchhhh
Q 025755           58 LQLFKTDL------------LD--------YEALCAATA-------GCTGVFHVACPVP--VG----KVPNPEVQLIDPA  104 (248)
Q Consensus        58 ~~~~~~Di------------~d--------~~~~~~~~~-------~id~vi~~ag~~~--~~----~~~~~~~~~~~~n  104 (248)
                      ..++.+|+            +|        .++++++++       ++|+||||||...  ..    ...+.|...+++|
T Consensus        87 ~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~vN  166 (319)
T 2ptg_A           87 DKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAAVSSS  166 (319)
T ss_dssp             SEEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHHHHHHHH
T ss_pred             cccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHHHHHhHh
Confidence            24444442            22        224444443       6899999999653  11    1123456789999


Q ss_pred             HHHHHHHHHHHHhc--CCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccccchHHHHHH----HHHHHHHHHHH
Q 025755          105 VVGTKNVLNSCVKA--KVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAKT----IAEIQALEYAK  178 (248)
Q Consensus       105 ~~g~~~~~~~~~~~--~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~----~~e~l~~~~~~  178 (248)
                      +.++.++++++.+.  ..++||++||..+..+.+...                    ..|+.||+    +++.++.++++
T Consensus       167 ~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~~~~--------------------~~Y~asKaal~~l~~~la~el~~  226 (319)
T 2ptg_A          167 SYSFVSLLQHFLPLMKEGGSALALSYIASEKVIPGYG--------------------GGMSSAKAALESDCRTLAFEAGR  226 (319)
T ss_dssp             THHHHHHHHHHGGGEEEEEEEEEEEECC--------------------------------------THHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHhcCceEEEEeccccccccCccc--------------------hhhHHHHHHHHHHHHHHHHHhcc
Confidence            99999999999875  237999999987766554320                    12999995    66666677664


Q ss_pred             hCCccEEEEccCeeecCCCCCCCC-----ccHHHH----HHHHcCC------------CCCCCCCchhhhhhhhhcccee
Q 025755          179 RGELDIVTVCPSIVIGPMLQPTIN-----TSSLLL----LGFLKGF------------FFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       179 ~~~i~v~~vrpg~i~g~~~~~~~~-----~~~~~~----~~~~~~~------------~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                      ..||+||+|+||.+.+++......     ......    .....++            |+.++...|+||+++.||||+.
T Consensus       227 ~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG~~  306 (319)
T 2ptg_A          227 ARAVRVNCISAGPLKSRAASAIGKAGDKTFIDLAIDYSEANAPLQKELESDDVGRAALFLLSPLARAVTGATLYVDNGLH  306 (319)
T ss_dssp             HHCCEEEEEEECCCC-------------------------------CCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTCT
T ss_pred             ccCeeEEEEeeCCccChhhhhcccccchhhHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhCcccCCccCCEEEECCCce
Confidence            235999999999999987432110     000000    0001111            6777778999999999999986


Q ss_pred             EE
Q 025755          238 LY  239 (248)
Q Consensus       238 ~~  239 (248)
                      +.
T Consensus       307 ~~  308 (319)
T 2ptg_A          307 AM  308 (319)
T ss_dssp             TC
T ss_pred             ee
Confidence            53

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=99.94  E-value=7.8e-27  Score=199.40  Aligned_cols=184  Identities=17%  Similarity=0.088  Sum_probs=149.0

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCCC-eEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEEcc
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKGY-MVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFHVA   85 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~~a   85 (248)
                      |+|+||||+|+||++++++|+++|+ +|+.++|+                          .|.+++.++++++|+|||+|
T Consensus         1 M~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~--------------------------~d~~~l~~~~~~~d~Vih~a   54 (369)
T 3st7_A            1 MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ--------------------------TKEEELESALLKADFIVHLA   54 (369)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT--------------------------CCHHHHHHHHHHCSEEEECC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC--------------------------CCHHHHHHHhccCCEEEECC
Confidence            4899999999999999999999998 77765543                          67888999999999999999


Q ss_pred             ccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCC-EEEEEeccceeccCCCCCCCCccCCCCCCchhhhccccchHHH
Q 025755           86 CPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVK-RVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCL  164 (248)
Q Consensus        86 g~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~-~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~  164 (248)
                      |....    ..+...+++|+.++.++++++++.+.+ ++||+||..++. .                        +.|+.
T Consensus        55 ~~~~~----~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~Ss~~~~~-~------------------------~~Y~~  105 (369)
T 3st7_A           55 GVNRP----EHDKEFSLGNVSYLDHVLDILTRNTKKPAILLSSSIQATQ-D------------------------NPYGE  105 (369)
T ss_dssp             CSBCT----TCSTTCSSSCCBHHHHHHHHHTTCSSCCEEEEEEEGGGGS-C------------------------SHHHH
T ss_pred             cCCCC----CCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCchhhcC-C------------------------CCchH
Confidence            97654    345678899999999999999999877 999999976432 1                        23999


Q ss_pred             HHHHHHHHHHHHHHhCCccEEEEccCeeecCCCCCC-CCccHHHHHHHHcCCCCCCCCCchhhhhhhhhccceeEEEeec
Q 025755          165 AKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPT-INTSSLLLLGFLKGFFFTTPSHSYMLERTLVLNQGVRLYRCKI  243 (248)
Q Consensus       165 sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~g~~l~vd~g~~~~~~~~  243 (248)
                      +|..+|.++++++++.+++++++||+++|||...+. ......++..+..+..+... ++....+.+++|+...++..++
T Consensus       106 sK~~~E~~~~~~~~~~g~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~v~Dva~~~~~~l  184 (369)
T 3st7_A          106 SKLQGEQLLREYAEEYGNTVYIYRWPNLFGKWCKPNYNSVIATFCYKIARNEEIQVN-DRNVELTLNYVDDIVAEIKRAI  184 (369)
T ss_dssp             HHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCTTSSCHHHHHHHHHHTTCCCCCS-CTTCEEEEEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCCEEEEECCceeCCCCCCCcchHHHHHHHHHHcCCCeEec-CCCeEEEEEEHHHHHHHHHHHH
Confidence            999999999999988789999999999999987654 24566777788887765543 3444456788888877665555


Q ss_pred             cCC
Q 025755          244 QIP  246 (248)
Q Consensus       244 ~~p  246 (248)
                      ..|
T Consensus       185 ~~~  187 (369)
T 3st7_A          185 EGT  187 (369)
T ss_dssp             HTC
T ss_pred             hCC
Confidence            433

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=99.94  E-value=7.9e-27  Score=192.45  Aligned_cols=194  Identities=16%  Similarity=0.110  Sum_probs=140.9

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEE
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFH   83 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~   83 (248)
                      .++|+|+|||+ |+||+++++.|+++|++|++++|+..+.  ..+.     ..++.++.+|+.|.+     ++++|+|||
T Consensus         3 ~m~~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~-----~~~~~~~~~D~~d~~-----~~~~d~vi~   69 (286)
T 3ius_A            3 AMTGTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQM--EAIR-----ASGAEPLLWPGEEPS-----LDGVTHLLI   69 (286)
T ss_dssp             --CCEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGH--HHHH-----HTTEEEEESSSSCCC-----CTTCCEEEE
T ss_pred             CCcCcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhh--hhHh-----hCCCeEEEecccccc-----cCCCCEEEE
Confidence            34589999998 9999999999999999999999986422  1111     146899999999844     788999999


Q ss_pred             ccccCCCCCCCCccccchhhhHHHHHHHHHHHHh--cCCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccccch
Q 025755           84 VACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVK--AKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENY  161 (248)
Q Consensus        84 ~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~--~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~  161 (248)
                      +|+.....   .          ..+.++++++++  .+.++|||+||.. +|+...   ..+++|+++..+      .+.
T Consensus        70 ~a~~~~~~---~----------~~~~~l~~a~~~~~~~~~~~v~~Ss~~-vyg~~~---~~~~~E~~~~~p------~~~  126 (286)
T 3ius_A           70 STAPDSGG---D----------PVLAALGDQIAARAAQFRWVGYLSTTA-VYGDHD---GAWVDETTPLTP------TAA  126 (286)
T ss_dssp             CCCCBTTB---C----------HHHHHHHHHHHHTGGGCSEEEEEEEGG-GGCCCT---TCEECTTSCCCC------CSH
T ss_pred             CCCccccc---c----------HHHHHHHHHHHhhcCCceEEEEeecce-ecCCCC---CCCcCCCCCCCC------CCH
Confidence            99975431   1          125788999988  6789999999965 555432   567888877655      456


Q ss_pred             HHHHHHHHHHHHHHHHHhCCccEEEEccCeeecCCCCCCCCccHHHHHHHHcCCCCCCCCCchhhhhhhhhccceeEEEe
Q 025755          162 YCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKGFFFTTPSHSYMLERTLVLNQGVRLYRC  241 (248)
Q Consensus       162 Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~l~vd~g~~~~~~  241 (248)
                      |+.+|..+|.++..+   .+++++++||+++|||.....        .++..+......... ...+.+++++...++..
T Consensus       127 Y~~sK~~~E~~~~~~---~~~~~~ilRp~~v~G~~~~~~--------~~~~~~~~~~~~~~~-~~~~~i~v~Dva~a~~~  194 (286)
T 3ius_A          127 RGRWRVMAEQQWQAV---PNLPLHVFRLAGIYGPGRGPF--------SKLGKGGIRRIIKPG-QVFSRIHVEDIAQVLAA  194 (286)
T ss_dssp             HHHHHHHHHHHHHHS---TTCCEEEEEECEEEBTTBSSS--------TTSSSSCCCEEECTT-CCBCEEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhh---cCCCEEEEeccceECCCchHH--------HHHhcCCccccCCCC-cccceEEHHHHHHHHHH
Confidence            999999999999887   469999999999999975431        223334433222222 23456777777666655


Q ss_pred             eccC
Q 025755          242 KIQI  245 (248)
Q Consensus       242 ~~~~  245 (248)
                      +++.
T Consensus       195 ~~~~  198 (286)
T 3ius_A          195 SMAR  198 (286)
T ss_dssp             HHHS
T ss_pred             HHhC
Confidence            5543

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=99.94  E-value=9.2e-27  Score=210.70  Aligned_cols=208  Identities=14%  Similarity=0.038  Sum_probs=140.2

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEc---------CCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHH
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVR---------DPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCA   73 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~   73 (248)
                      ++++|+++||||++|||+++++.|+++|++|++++|         +.. ......+++......+   .+|+.|.+++++
T Consensus        16 ~l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~-~~~~~~~~i~~~~~~~---~~D~~d~~~~~~   91 (613)
T 3oml_A           16 RYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQR-AADIVVDEIRKAGGEA---VADYNSVIDGAK   91 (613)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC---------------CHHHHHHHHHHTTCCE---EECCCCGGGHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHH-HHHHHHHHHHHhCCeE---EEEeCCHHHHHH
Confidence            478999999999999999999999999999999987         322 2223333333323332   479999988888


Q ss_pred             HhC-------CCCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHH----hcCCCEEEEEeccceeccCCCC
Q 025755           74 ATA-------GCTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCV----KAKVKRVVVVSSIGAVMLNPNW  138 (248)
Q Consensus        74 ~~~-------~id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~----~~~~~~iV~vSS~~~~~~~~~~  138 (248)
                      +++       ++|+||||||+......    .+.|...+++|+.|+.++++++.    +.+.++||++||..+.++.+..
T Consensus        92 ~~~~~~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~isS~a~~~~~~~~  171 (613)
T 3oml_A           92 VIETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYGNFGQ  171 (613)
T ss_dssp             HHC----------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCHHHHHCCTTC
T ss_pred             HHHHHHHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCCCCC
Confidence            776       47999999998754322    24457789999999999888874    4466899999998888776543


Q ss_pred             CCCCccCCCCCCchhhhccccchHHHHHHHHHHH----HHHHHHhCCccEEEEccCeeecCCCCCCCCc------cHHHH
Q 025755          139 PKGQVMDEECWSDEEFCKATENYYCLAKTIAEIQ----ALEYAKRGELDIVTVCPSIVIGPMLQPTINT------SSLLL  208 (248)
Q Consensus       139 ~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~l----~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~~------~~~~~  208 (248)
                      .                     .|+.||++.+.+    +.++++. ||+||+|+||.+ +++.......      .+..+
T Consensus       172 ~---------------------~Y~asKaal~~lt~~la~e~~~~-gI~vn~v~Pg~~-t~~~~~~~~~~~~~~~~pedv  228 (613)
T 3oml_A          172 V---------------------NYTAAKMGLIGLANTVAIEGARN-NVLCNVIVPTAA-SRMTEGILPDILFNELKPKLI  228 (613)
T ss_dssp             H---------------------HHHHHHHHHHHHHHHHHHHHGGG-TEEEEEEEEC-------CCCCCHHHHTTCCGGGT
T ss_pred             h---------------------HHHHHHHHHHHHHHHHHHHhCcc-CeEEEEEECCCC-ChhhhhccchhhhhcCCHHHH
Confidence            2                     399999755544    5555444 599999999975 4443321110      00111


Q ss_pred             HHHHcCCCCCCCCCchhhhhhhhhccceeEEE
Q 025755          209 LGFLKGFFFTTPSHSYMLERTLVLNQGVRLYR  240 (248)
Q Consensus       209 ~~~~~~~~l~~~~~~~~~g~~l~vd~g~~~~~  240 (248)
                      .....  +|.++. .+++|+++.+|||+..-.
T Consensus       229 A~~v~--~L~s~~-~~~tG~~i~vdGG~~~~~  257 (613)
T 3oml_A          229 APVVA--YLCHES-CEDNGSYIESAAGWATKL  257 (613)
T ss_dssp             HHHHH--HTTSTT-CCCCSCEEEEETTEEEEE
T ss_pred             HHHHH--HhcCCC-cCCCceEEEECCCeEEEE
Confidence            11111  677777 899999999999988654

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=99.94  E-value=4.3e-26  Score=194.04  Aligned_cols=213  Identities=16%  Similarity=0.120  Sum_probs=152.4

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCC-----CeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCC---
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKG-----YMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAG---   77 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g-----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~---   77 (248)
                      +|+|+||||+|+||++++++|+++|     ++|++++|+.....        ....++.++.+|++|.+++.+++++   
T Consensus         1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~--------~~~~~~~~~~~Dl~d~~~~~~~~~~~~~   72 (364)
T 2v6g_A            1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW--------HEDNPINYVQCDISDPDDSQAKLSPLTD   72 (364)
T ss_dssp             CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC--------CCSSCCEEEECCTTSHHHHHHHHTTCTT
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc--------cccCceEEEEeecCCHHHHHHHHhcCCC
Confidence            4799999999999999999999999     99999999865321        1135788999999999999999998   


Q ss_pred             CCEEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhc--CCCEEE-------EEeccceeccCCCCCCCCccCCCC
Q 025755           78 CTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKA--KVKRVV-------VVSSIGAVMLNPNWPKGQVMDEEC  148 (248)
Q Consensus        78 id~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~--~~~~iV-------~vSS~~~~~~~~~~~~~~~~~e~~  148 (248)
                      +|+|||+||...     .++..++++|+.++.++++++++.  +++++|       |+||.. +|+... ....+++|++
T Consensus        73 ~d~vih~a~~~~-----~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~~g~~i~~Ss~~-vyg~~~-~~~~~~~E~~  145 (364)
T 2v6g_A           73 VTHVFYVTWANR-----STEQENCEANSKMFRNVLDAVIPNCPNLKHISLQTGRKHYMGPFE-SYGKIE-SHDPPYTEDL  145 (364)
T ss_dssp             CCEEEECCCCCC-----SSHHHHHHHHHHHHHHHHHHHTTTCTTCCEEEEECCTHHHHCCGG-GTTTSC-CCCSSBCTTS
T ss_pred             CCEEEECCCCCc-----chHHHHHHHhHHHHHHHHHHHHHhccccceEEeccCceEEEechh-hccccc-cCCCCCCccc
Confidence            999999999753     245778999999999999999998  788998       788865 454421 1135677777


Q ss_pred             CCchhhhccccchHHHHHHHHHHHHHHHHHhCC-ccEEEEccCeeecCCCCCCCC-ccHH-HHHHH--HcCCCCCCCCCc
Q 025755          149 WSDEEFCKATENYYCLAKTIAEIQALEYAKRGE-LDIVTVCPSIVIGPMLQPTIN-TSSL-LLLGF--LKGFFFTTPSHS  223 (248)
Q Consensus       149 ~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~~-i~v~~vrpg~i~g~~~~~~~~-~~~~-~~~~~--~~~~~l~~~~~~  223 (248)
                      +..+.     .+.|    ..+|.++.+++.+++ ++++++||+++|||....... .... ++..+  ..+..+...+++
T Consensus       146 ~~~~~-----~~~y----~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~  216 (364)
T 2v6g_A          146 PRLKY-----MNFY----YDLEDIMLEEVEKKEGLTWSVHRPGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVLRFTGCK  216 (364)
T ss_dssp             CCCSS-----CCHH----HHHHHHHHHHHTTSTTCEEEEEEESSEECCCTTCSSCHHHHHHHHHHHHHHHTCCBCCCSCH
T ss_pred             cCCcc-----chhh----HHHHHHHHHHhhcCCCceEEEECCCceeCCCCCcccchHHHHHHHHHHHHhcCCceecCCCc
Confidence            65431     2347    347888888887666 999999999999998753222 1223 23333  255554444443


Q ss_pred             hhh---hhhhhhccceeEEEee
Q 025755          224 YML---ERTLVLNQGVRLYRCK  242 (248)
Q Consensus       224 ~~~---g~~l~vd~g~~~~~~~  242 (248)
                      ...   -.++++|+...++..+
T Consensus       217 ~~~~~~~~~~~v~Dva~a~~~~  238 (364)
T 2v6g_A          217 AAWDGYSDCSDADLIAEHHIWA  238 (364)
T ss_dssp             HHHHSCBCCEEHHHHHHHHHHH
T ss_pred             ccccccCCCCcHHHHHHHHHHH
Confidence            221   2334445554444333

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.94  E-value=1.8e-26  Score=208.10  Aligned_cols=208  Identities=16%  Similarity=0.119  Sum_probs=145.6

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccC-CCHHHHH-H---HhCC
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDL-LDYEALC-A---ATAG   77 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di-~d~~~~~-~---~~~~   77 (248)
                      .+++|+++||||++|||+++++.|+++|++|++.+++..+   ...+++.....++..+.+|+ .+.+.+. .   .+.+
T Consensus       319 ~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~---~~~~~i~~~g~~~~~~~~Dv~~~~~~~~~~~~~~~G~  395 (604)
T 2et6_A          319 SLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDAT---KTVDEIKAAGGEAWPDQHDVAKDSEAIIKNVIDKYGT  395 (604)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCH---HHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHHHSC
T ss_pred             ccCCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCccHH---HHHHHHHhcCCeEEEEEcChHHHHHHHHHHHHHhcCC
Confidence            4788999999999999999999999999999998864322   22223322345677788999 5544322 2   2347


Q ss_pred             CCEEEEccccCCCCC----CCCccccchhhhHHHHHHHHHHHHh----cCCCEEEEEeccceeccCCCCCCCCccCCCCC
Q 025755           78 CTGVFHVACPVPVGK----VPNPEVQLIDPAVVGTKNVLNSCVK----AKVKRVVVVSSIGAVMLNPNWPKGQVMDEECW  149 (248)
Q Consensus        78 id~vi~~ag~~~~~~----~~~~~~~~~~~n~~g~~~~~~~~~~----~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~  149 (248)
                      +|++|||||+.....    ..+.|+..+++|+.|+.++.+++.+    .+.++||++||..+..+.+..           
T Consensus       396 iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag~~~~~~~-----------  464 (604)
T 2et6_A          396 IDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYGNFGQ-----------  464 (604)
T ss_dssp             CCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCTTB-----------
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCCCC-----------
Confidence            999999999865332    1245678999999998888777654    456899999998877766542           


Q ss_pred             CchhhhccccchHHHHHH----HHHHHHHHHHHhCCccEEEEccCeeecCCCCCCCC------ccHHHHHHHHcCCCCCC
Q 025755          150 SDEEFCKATENYYCLAKT----IAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTIN------TSSLLLLGFLKGFFFTT  219 (248)
Q Consensus       150 ~~~~~~~~~~~~Y~~sK~----~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~------~~~~~~~~~~~~~~l~~  219 (248)
                                ..|+.||+    +++.++.+++++ |||||+|+||. .+++......      ..+..+.....  |+.+
T Consensus       465 ----------~~Y~asKaal~~lt~~la~El~~~-gIrVn~v~PG~-~T~m~~~~~~~~~~~~~~pe~vA~~v~--~L~s  530 (604)
T 2et6_A          465 ----------ANYSSSKAGILGLSKTMAIEGAKN-NIKVNIVAPHA-ETAMTLSIMREQDKNLYHADQVAPLLV--YLGT  530 (604)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHHHGGG-TEEEEEEEECC-CCCC---------CCSSCGGGTHHHHH--HTTS
T ss_pred             ----------hhHHHHHHHHHHHHHHHHHHhCcc-CeEEEEEcCCC-CCccccccCchhhccCCCHHHHHHHHH--HHhC
Confidence                      23999995    677777777765 49999999995 6766432100      01111111111  7778


Q ss_pred             CCCchhhhhhhhhccceeEE
Q 025755          220 PSHSYMLERTLVLNQGVRLY  239 (248)
Q Consensus       220 ~~~~~~~g~~l~vd~g~~~~  239 (248)
                      +... +||+++.||||+...
T Consensus       531 ~~~~-itG~~~~vdGG~~~~  549 (604)
T 2et6_A          531 DDVP-VTGETFEIGGGWIGN  549 (604)
T ss_dssp             TTCC-CCSCEEEEETTEEEE
T ss_pred             CccC-CCCcEEEECCCeeEe
Confidence            8778 999999999998753

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.94  E-value=1.8e-25  Score=177.77  Aligned_cols=155  Identities=16%  Similarity=0.090  Sum_probs=119.2

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHH-HCCCeEEEEEcCCC-chhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEE
Q 025755            5 DKERVCVTGAGGYIASWLVKYLL-LKGYMVHGTVRDPC-DEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVF   82 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~-~~g~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi   82 (248)
                      +||+|+||||+|+||++++++|+ ++|++|++++|+.. ..     +.+.....++.++.+|++|.++++++++++|+||
T Consensus         4 mmk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~-----~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vv   78 (221)
T 3r6d_A            4 MYXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRI-----PPEIIDHERVTVIEGSFQNPGXLEQAVTNAEVVF   78 (221)
T ss_dssp             SCSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHS-----CHHHHTSTTEEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred             eEEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccc-----hhhccCCCceEEEECCCCCHHHHHHHHcCCCEEE
Confidence            45789999999999999999999 89999999999853 21     1111124679999999999999999999999999


Q ss_pred             EccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccccchH
Q 025755           83 HVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYY  162 (248)
Q Consensus        83 ~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y  162 (248)
                      ||||..               |+. ++++++++++.+.++||++||..++.+.+.     ..      .+.......+.|
T Consensus        79 ~~ag~~---------------n~~-~~~~~~~~~~~~~~~iv~iSs~~~~~~~~~-----~~------~~~~~~~~~~~y  131 (221)
T 3r6d_A           79 VGAMES---------------GSD-MASIVKALSRXNIRRVIGVSMAGLSGEFPV-----AL------EKWTFDNLPISY  131 (221)
T ss_dssp             ESCCCC---------------HHH-HHHHHHHHHHTTCCEEEEEEETTTTSCSCH-----HH------HHHHHHTSCHHH
T ss_pred             EcCCCC---------------Chh-HHHHHHHHHhcCCCeEEEEeeceecCCCCc-----cc------ccccccccccHH
Confidence            999853               444 899999999999899999999765433211     00      000000111159


Q ss_pred             HHHHHHHHHHHHHHHHhCCccEEEEccCeeecC
Q 025755          163 CLAKTIAEIQALEYAKRGELDIVTVCPSIVIGP  195 (248)
Q Consensus       163 ~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~  195 (248)
                      +.+|...|.+.+.    .++++++||||+++++
T Consensus       132 ~~~K~~~e~~~~~----~~i~~~~vrpg~v~~~  160 (221)
T 3r6d_A          132 VQGERQARNVLRE----SNLNYTILRLTWLYND  160 (221)
T ss_dssp             HHHHHHHHHHHHH----SCSEEEEEEECEEECC
T ss_pred             HHHHHHHHHHHHh----CCCCEEEEechhhcCC
Confidence            9999988877653    5699999999999998

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.94  E-value=2.8e-25  Score=174.21  Aligned_cols=153  Identities=16%  Similarity=0.116  Sum_probs=122.2

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEEcc
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFHVA   85 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~~a   85 (248)
                      +|+|+||||+|+||++++++|+++|++|++++|+.....     ..  ...++.++.+|++|.+++.++++++|+|||+|
T Consensus         3 ~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~-----~~--~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a   75 (206)
T 1hdo_A            3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLP-----SE--GPRPAHVVVGDVLQAADVDKTVAGQDAVIVLL   75 (206)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSC-----SS--SCCCSEEEESCTTSHHHHHHHHTTCSEEEECC
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcc-----cc--cCCceEEEEecCCCHHHHHHHHcCCCEEEECc
Confidence            479999999999999999999999999999999864211     00  13578999999999999999999999999999


Q ss_pred             ccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccccchHHHH
Q 025755           86 CPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLA  165 (248)
Q Consensus        86 g~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~s  165 (248)
                      |.....       ...++|+.++.++++++++.+.++||++||... ++...   ..+       .      +...|+.+
T Consensus        76 ~~~~~~-------~~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss~~~-~~~~~---~~~-------~------~~~~y~~~  131 (206)
T 1hdo_A           76 GTRNDL-------SPTTVMSEGARNIVAAMKAHGVDKVVACTSAFL-LWDPT---KVP-------P------RLQAVTDD  131 (206)
T ss_dssp             CCTTCC-------SCCCHHHHHHHHHHHHHHHHTCCEEEEECCGGG-TSCTT---CSC-------G------GGHHHHHH
T ss_pred             cCCCCC-------CccchHHHHHHHHHHHHHHhCCCeEEEEeeeee-ccCcc---ccc-------c------cchhHHHH
Confidence            975431       123689999999999999998899999999754 33211   000       0      23459999


Q ss_pred             HHHHHHHHHHHHHhCCccEEEEccCeee
Q 025755          166 KTIAEIQALEYAKRGELDIVTVCPSIVI  193 (248)
Q Consensus       166 K~~~e~l~~~~~~~~~i~v~~vrpg~i~  193 (248)
                      |...|.+++    +.+++++++||+.+.
T Consensus       132 K~~~e~~~~----~~~i~~~~lrp~~~~  155 (206)
T 1hdo_A          132 HIRMHKVLR----ESGLKYVAVMPPHIG  155 (206)
T ss_dssp             HHHHHHHHH----HTCSEEEEECCSEEE
T ss_pred             HHHHHHHHH----hCCCCEEEEeCCccc
Confidence            999998874    356999999999983

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=99.93  E-value=1.6e-26  Score=186.76  Aligned_cols=168  Identities=21%  Similarity=0.162  Sum_probs=106.9

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHH---Hh---C
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCA---AT---A   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~---~~---~   76 (248)
                      ++++|+++||||+||||+++++.|++ |++|++++|+....  ....   . ..++.++.+|+++.++.+.   .+   .
T Consensus         2 ~l~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~--~~~~---~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~   74 (245)
T 3e9n_A            2 SLKKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHL--AALA---E-IEGVEPIESDIVKEVLEEGGVDKLKNLD   74 (245)
T ss_dssp             ----CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHH--HHHH---T-STTEEEEECCHHHHHHTSSSCGGGTTCS
T ss_pred             CCCCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHH--HHHH---h-hcCCcceecccchHHHHHHHHHHHHhcC
Confidence            38899999999999999999999987 99999999876321  1111   1 3468899999988754221   11   2


Q ss_pred             CCCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHHhc---CCCEEEEEeccceeccCCCCCCCCccCCCCC
Q 025755           77 GCTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCVKA---KVKRVVVVSSIGAVMLNPNWPKGQVMDEECW  149 (248)
Q Consensus        77 ~id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~~~---~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~  149 (248)
                      ++|+||||||.......    .+.+...+++|+.++.++++++.+.   ..++||++||..++.+.+..           
T Consensus        75 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-----------  143 (245)
T 3e9n_A           75 HVDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAASGCVIYINSGAGNGPHPGN-----------  143 (245)
T ss_dssp             CCSEEEECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEC----------C-----------
T ss_pred             CCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEcCcccccCCCCc-----------
Confidence            68999999998754422    2345678999999988888877542   23799999998877665432           


Q ss_pred             CchhhhccccchHHHHHHHHHHHHHHHHHh---CCccEEEEccCeeecCCCC
Q 025755          150 SDEEFCKATENYYCLAKTIAEIQALEYAKR---GELDIVTVCPSIVIGPMLQ  198 (248)
Q Consensus       150 ~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~---~~i~v~~vrpg~i~g~~~~  198 (248)
                                ..|+.||++.+.+++.++.+   .++++++|+||.+.+++..
T Consensus       144 ----------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~  185 (245)
T 3e9n_A          144 ----------TIYAASKHALRGLADAFRKEEANNGIRVSTVSPGPTNTPMLQ  185 (245)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC------
T ss_pred             ----------hHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCccCchhh
Confidence                      33999998776666666543   3699999999999998754

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.93  E-value=2.2e-26  Score=181.93  Aligned_cols=191  Identities=15%  Similarity=0.056  Sum_probs=142.0

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCC--eEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEE
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGY--MVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGV   81 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~v   81 (248)
                      .++|+|+||||+|+||++++++|+++|+  +|++++|+...           ...++.++.+|++|.+++.+++  +|+|
T Consensus         3 ~~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~-----------~~~~~~~~~~D~~~~~~~~~~~--~d~v   69 (215)
T 2a35_A            3 STPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA-----------EHPRLDNPVGPLAELLPQLDGS--IDTA   69 (215)
T ss_dssp             -CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC-----------CCTTEECCBSCHHHHGGGCCSC--CSEE
T ss_pred             CCCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc-----------cCCCceEEeccccCHHHHHHhh--hcEE
Confidence            3568999999999999999999999998  99999998742           1346888899999998888877  9999


Q ss_pred             EEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccccch
Q 025755           82 FHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENY  161 (248)
Q Consensus        82 i~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~  161 (248)
                      |||||.....  ...+..++++|+.++.++++++++.+.++||++||...+ +.+                      .+.
T Consensus        70 i~~a~~~~~~--~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~-~~~----------------------~~~  124 (215)
T 2a35_A           70 FCCLGTTIKE--AGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGAD-AKS----------------------SIF  124 (215)
T ss_dssp             EECCCCCHHH--HSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCC-TTC----------------------SSH
T ss_pred             EECeeecccc--CCCHHHHHHhhHHHHHHHHHHHHHcCCCEEEEECCcccC-CCC----------------------ccH
Confidence            9999975421  234577889999999999999999998999999997643 221                      234


Q ss_pred             HHHHHHHHHHHHHHHHHhCCcc-EEEEccCeeecCCCCCCCCccHHHHHHHHcCCCCCCCCCchhhhhhhhhccceeEEE
Q 025755          162 YCLAKTIAEIQALEYAKRGELD-IVTVCPSIVIGPMLQPTINTSSLLLLGFLKGFFFTTPSHSYMLERTLVLNQGVRLYR  240 (248)
Q Consensus       162 Y~~sK~~~e~l~~~~~~~~~i~-v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~l~vd~g~~~~~  240 (248)
                      |+.+|...|.+++.    .+++ ++++|||.+|||.....  .    +..+. +...... .+  ..+.+++++...++.
T Consensus       125 y~~sK~~~e~~~~~----~~~~~~~~vrp~~v~g~~~~~~--~----~~~~~-~~~~~~~-~~--~~~~i~~~Dva~~~~  190 (215)
T 2a35_A          125 YNRVKGELEQALQE----QGWPQLTIARPSLLFGPREEFR--L----AEILA-APIARIL-PG--KYHGIEACDLARALW  190 (215)
T ss_dssp             HHHHHHHHHHHHTT----SCCSEEEEEECCSEESTTSCEE--G----GGGTT-CCCC-----C--HHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHH----cCCCeEEEEeCceeeCCCCcch--H----HHHHH-Hhhhhcc-CC--CcCcEeHHHHHHHHH
Confidence            99999999988765    3699 99999999999976421  1    11111 1111111 11  345678888776665


Q ss_pred             eeccCC
Q 025755          241 CKIQIP  246 (248)
Q Consensus       241 ~~~~~p  246 (248)
                      .++..|
T Consensus       191 ~~~~~~  196 (215)
T 2a35_A          191 RLALEE  196 (215)
T ss_dssp             HHHTCC
T ss_pred             HHHhcC
Confidence            555543

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=99.93  E-value=1.4e-26  Score=189.62  Aligned_cols=192  Identities=16%  Similarity=0.076  Sum_probs=141.1

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCC--CCEEEEc
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAG--CTGVFHV   84 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~--id~vi~~   84 (248)
                      |+|+||||+|+||++++++|++ |++|++++|+... .           .+   +.+|++|.+++.+++++  +|+||||
T Consensus         1 m~ilVtGatG~iG~~l~~~L~~-g~~V~~~~r~~~~-~-----------~~---~~~Dl~~~~~~~~~~~~~~~d~vi~~   64 (273)
T 2ggs_A            1 MRTLITGASGQLGIELSRLLSE-RHEVIKVYNSSEI-Q-----------GG---YKLDLTDFPRLEDFIIKKRPDVIINA   64 (273)
T ss_dssp             CCEEEETTTSHHHHHHHHHHTT-TSCEEEEESSSCC-T-----------TC---EECCTTSHHHHHHHHHHHCCSEEEEC
T ss_pred             CEEEEECCCChhHHHHHHHHhc-CCeEEEecCCCcC-C-----------CC---ceeccCCHHHHHHHHHhcCCCEEEEC
Confidence            3799999999999999999994 8999999998631 0           11   78999999999999886  9999999


Q ss_pred             cccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccccchHHH
Q 025755           85 ACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCL  164 (248)
Q Consensus        85 ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~  164 (248)
                      ||..........+...+++|+.++.++++++.+.+. +||++||..++.+.     ..+++|+++..+      .+.|+.
T Consensus        65 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~iv~~SS~~~~~~~-----~~~~~e~~~~~~------~~~Y~~  132 (273)
T 2ggs_A           65 AAMTDVDKCEIEKEKAYKINAEAVRHIVRAGKVIDS-YIVHISTDYVFDGE-----KGNYKEEDIPNP------INYYGL  132 (273)
T ss_dssp             CCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTC-EEEEEEEGGGSCSS-----SCSBCTTSCCCC------SSHHHH
T ss_pred             CcccChhhhhhCHHHHHHHhHHHHHHHHHHHHHhCC-eEEEEecceeEcCC-----CCCcCCCCCCCC------CCHHHH
Confidence            997653211234577899999999999999999875 99999997755433     236677766543      456999


Q ss_pred             HHHHHHHHHHHHHHhCCccEEEEccCeeecCCCCCCCCccHHHHHHHHcCCCCCCCCCchhhhhhhhhccceeEEE
Q 025755          165 AKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKGFFFTTPSHSYMLERTLVLNQGVRLYR  240 (248)
Q Consensus       165 sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~l~vd~g~~~~~  240 (248)
                      +|...|.+++.      +++.++||+.+||+.     .....++.....+..+....+   ..+.+++++...++.
T Consensus       133 sK~~~e~~~~~------~~~~~iR~~~v~G~~-----~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~dva~~i~  194 (273)
T 2ggs_A          133 SKLLGETFALQ------DDSLIIRTSGIFRNK-----GFPIYVYKTLKEGKTVFAFKG---YYSPISARKLASAIL  194 (273)
T ss_dssp             HHHHHHHHHCC------TTCEEEEECCCBSSS-----SHHHHHHHHHHTTCCEEEESC---EECCCBHHHHHHHHH
T ss_pred             HHHHHHHHHhC------CCeEEEecccccccc-----HHHHHHHHHHHcCCCEEeecC---CCCceEHHHHHHHHH
Confidence            99999988865      567999999999721     233344455555554332222   334566666554443

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.93  E-value=9e-26  Score=203.61  Aligned_cols=208  Identities=15%  Similarity=0.093  Sum_probs=141.8

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCC--------chhhHHhhhhcCCCCCeEEEEccCCCHHHHHHH
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPC--------DEKNAHLKKLEGASENLQLFKTDLLDYEALCAA   74 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~--------~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~   74 (248)
                      ++++|+++||||++|||+++++.|+++|++|++.+|+..        +......+++.....+..   +|+.|.++++++
T Consensus         5 ~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~~---~d~~d~~~~~~~   81 (604)
T 2et6_A            5 DFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVAV---ADYNNVLDGDKI   81 (604)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTCEEE---EECCCTTCHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCCeEE---EEcCCHHHHHHH
Confidence            367899999999999999999999999999999987541        112222333332223332   455554333333


Q ss_pred             -------hCCCCEEEEccccCCCCC----CCCccccchhhhHHHHHHHHHHHHh----cCCCEEEEEeccceeccCCCCC
Q 025755           75 -------TAGCTGVFHVACPVPVGK----VPNPEVQLIDPAVVGTKNVLNSCVK----AKVKRVVVVSSIGAVMLNPNWP  139 (248)
Q Consensus        75 -------~~~id~vi~~ag~~~~~~----~~~~~~~~~~~n~~g~~~~~~~~~~----~~~~~iV~vSS~~~~~~~~~~~  139 (248)
                             +.++|++|||||+.....    ..+.|+..+++|+.|+.++.+++.+    .+.++||++||..+..+.+...
T Consensus        82 v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ag~~~~~~~~  161 (604)
T 2et6_A           82 VETAVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLYGNFGQA  161 (604)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTBH
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCCCCch
Confidence                   347999999999764332    1244678999999998887777654    4568999999988877765432


Q ss_pred             CCCccCCCCCCchhhhccccchHHHHHH----HHHHHHHHHHHhCCccEEEEccCeeecCCCCCCC------CccHHHHH
Q 025755          140 KGQVMDEECWSDEEFCKATENYYCLAKT----IAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTI------NTSSLLLL  209 (248)
Q Consensus       140 ~~~~~~e~~~~~~~~~~~~~~~Y~~sK~----~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~------~~~~~~~~  209 (248)
                                           .|+.||+    +++.++.+++++ |||||+|+|| +.+++.....      ...+..+.
T Consensus       162 ---------------------~Y~asKaal~~lt~~la~El~~~-gIrVn~v~Pg-~~T~m~~~~~~~~~~~~~~pe~vA  218 (604)
T 2et6_A          162 ---------------------NYASAKSALLGFAETLAKEGAKY-NIKANAIAPL-ARSRMTESIMPPPMLEKLGPEKVA  218 (604)
T ss_dssp             ---------------------HHHHHHHHHHHHHHHHHHHHGGG-TEEEEEEEEC-CCCHHHHTTSCHHHHTTCSHHHHH
T ss_pred             ---------------------HHHHHHHHHHHHHHHHHHHhCcc-CeEEEEEccC-CcCccccccCChhhhccCCHHHHH
Confidence                                 3999995    777777777765 5999999997 5555421110      01122222


Q ss_pred             HHHcCCCCCCCCCchhhhhhhhhccceeEE
Q 025755          210 GFLKGFFFTTPSHSYMLERTLVLNQGVRLY  239 (248)
Q Consensus       210 ~~~~~~~l~~~~~~~~~g~~l~vd~g~~~~  239 (248)
                      ....  |+.++. .|+||+++.||||+...
T Consensus       219 ~~v~--~L~s~~-~~itG~~~~vdgG~~~~  245 (604)
T 2et6_A          219 PLVL--YLSSAE-NELTGQFFEVAAGFYAQ  245 (604)
T ss_dssp             HHHH--HHTSSS-CCCCSCEEEEETTEEEE
T ss_pred             HHHH--HHhCCc-ccCCCCEEEECCCeEEE
Confidence            2221  677777 99999999999997644

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=99.92  E-value=1.2e-25  Score=190.47  Aligned_cols=214  Identities=13%  Similarity=-0.021  Sum_probs=147.6

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHH-CCCeEEEEEcCCCchhh----------HH-hhhhcCCCCCeEEEEccCCCHHHH
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLL-KGYMVHGTVRDPCDEKN----------AH-LKKLEGASENLQLFKTDLLDYEAL   71 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~-~g~~V~~~~r~~~~~~~----------~~-~~~~~~~~~~~~~~~~Di~d~~~~   71 (248)
                      ..+|++|||||++|||+++++.|++ +|++|++++|+......          .. .+.......++..+.+|++|.+++
T Consensus        45 ~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvtd~~~v  124 (405)
T 3zu3_A           45 NGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFSDEIK  124 (405)
T ss_dssp             TCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHH
T ss_pred             CCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCCCHHHH
Confidence            3579999999999999999999999 99999999987643221          11 112233356788999999999988


Q ss_pred             HHHhC-------CCCEEEEccccCC-------------CC-------------------------CCCCccccchhhhHH
Q 025755           72 CAATA-------GCTGVFHVACPVP-------------VG-------------------------KVPNPEVQLIDPAVV  106 (248)
Q Consensus        72 ~~~~~-------~id~vi~~ag~~~-------------~~-------------------------~~~~~~~~~~~~n~~  106 (248)
                      +++++       ++|++|||||...             ..                         ...++|+.++++|..
T Consensus       125 ~~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v~Vn~~  204 (405)
T 3zu3_A          125 QLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVAVMGG  204 (405)
T ss_dssp             HHHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSS
T ss_pred             HHHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHHHHhhch
Confidence            88765       5899999999741             01                         112345667888888


Q ss_pred             HHH-HHHHHHHhc----CCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccccchHHHHHH----HHHHHHHHHH
Q 025755          107 GTK-NVLNSCVKA----KVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAKT----IAEIQALEYA  177 (248)
Q Consensus       107 g~~-~~~~~~~~~----~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~----~~e~l~~~~~  177 (248)
                      +.. .+++++...    +.++||++||..+..+.+.+.                   ...|+.||+    +++.++.+++
T Consensus       205 ~~~~~~~~~~~~~~m~~~gG~IVniSSi~~~~~~p~~~-------------------~~aY~AaKaal~~ltrsLA~Ela  265 (405)
T 3zu3_A          205 EDWQMWIDALLDAGVLAEGAQTTAFTYLGEKITHDIYW-------------------NGSIGAAKKDLDQKVLAIRESLA  265 (405)
T ss_dssp             HHHHHHHHHHHHHTCEEEEEEEEEEECCCCGGGTTTTT-------------------TSHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHhhhhCCcEEEEEeCchhhCcCCCcc-------------------chHHHHHHHHHHHHHHHHHHHhC
Confidence            776 566665432    247999999988776655430                   023999995    7777888888


Q ss_pred             HhCCccEEEEccCeeecCCCCCCCCc--cHHHHHHHHcCC-----------CCCCCCCchhhhhhhhhccceeEE
Q 025755          178 KRGELDIVTVCPSIVIGPMLQPTINT--SSLLLLGFLKGF-----------FFTTPSHSYMLERTLVLNQGVRLY  239 (248)
Q Consensus       178 ~~~~i~v~~vrpg~i~g~~~~~~~~~--~~~~~~~~~~~~-----------~l~~~~~~~~~g~~l~vd~g~~~~  239 (248)
                      +.+|||||+|+||.+.+++....+..  ....+.+.++..           +|.++   +++|+.+.+|++.++-
T Consensus       266 ~~~GIRVNaVaPG~i~T~~s~~ip~~p~y~~~l~~~mkr~G~~Ed~a~~i~~L~sd---~l~~~~~~~D~~~~~r  337 (405)
T 3zu3_A          266 AHGGGDARVSVLKAVVSQASSAIPMMPLYLSLLFKVMKEKGTHEGCIEQVYSLYKD---SLCGDSPHMDQEGRLR  337 (405)
T ss_dssp             TTTSCEEEEEECCCCCCHHHHTSTTHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHH---TTSSSCCCBCTTSCEE
T ss_pred             cccCeEEEEEEeCCCcCchhhcCCCCcHHHHHHHHHHhcCCCcHHHHHHHHHHHhc---cccCCCCCcCCCcCCC
Confidence            76259999999999999865432211  111222222211           44433   7778888899987654

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=99.92  E-value=1e-25  Score=200.48  Aligned_cols=206  Identities=15%  Similarity=0.092  Sum_probs=146.2

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEEcc
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFHVA   85 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~~a   85 (248)
                      +|+||||||+|+||+++++.|+++|++|++++|+....               ..+.+|+.+.  +..+++++|+|||+|
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~---------------~~v~~d~~~~--~~~~l~~~D~Vih~A  209 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKP---------------GKRFWDPLNP--ASDLLDGADVLVHLA  209 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCT---------------TCEECCTTSC--CTTTTTTCSEEEECC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCc---------------cceeecccch--hHHhcCCCCEEEECC
Confidence            78999999999999999999999999999999987421               1256777653  456678999999999


Q ss_pred             ccCCCCC-CCCccccchhhhHHHHHHHHHH-HHhcCCCEEEEEeccceecc-CCCCCCCCccCCCCCCchhhhccccchH
Q 025755           86 CPVPVGK-VPNPEVQLIDPAVVGTKNVLNS-CVKAKVKRVVVVSSIGAVML-NPNWPKGQVMDEECWSDEEFCKATENYY  162 (248)
Q Consensus        86 g~~~~~~-~~~~~~~~~~~n~~g~~~~~~~-~~~~~~~~iV~vSS~~~~~~-~~~~~~~~~~~e~~~~~~~~~~~~~~~Y  162 (248)
                      |...... ....+..++++|+.++.+++++ +++.+.++|||+||.. +|+ ...   ..+++|+.+.       +.+.|
T Consensus       210 ~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~a~~~~~~r~V~~SS~~-vyg~~~~---~~~~~E~~~~-------~~~~y  278 (516)
T 3oh8_A          210 GEPIFGRFNDSHKEAIRESRVLPTKFLAELVAESTQCTTMISASAVG-FYGHDRG---DEILTEESES-------GDDFL  278 (516)
T ss_dssp             CC-----CCGGGHHHHHHHTHHHHHHHHHHHHHCSSCCEEEEEEEGG-GGCSEEE---EEEECTTSCC-------CSSHH
T ss_pred             CCccccccchhHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCcce-EecCCCC---CCccCCCCCC-------CcChH
Confidence            9764432 2334467889999999999999 5566788999999966 454 321   4567777765       24559


Q ss_pred             HHHHHHHHHHHHHHHHhCCccEEEEccCeeecCCCCCCCCccHHHHHHHHcCCCCCCCCCchhhhhhhhhccceeEEEee
Q 025755          163 CLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKGFFFTTPSHSYMLERTLVLNQGVRLYRCK  242 (248)
Q Consensus       163 ~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~l~vd~g~~~~~~~  242 (248)
                      +.+|...|.++..+. ..+++++++|||++|||..    .....++..+..+... ...++....+.+++|+...++..+
T Consensus       279 ~~~~~~~E~~~~~~~-~~gi~~~ilRp~~v~Gp~~----~~~~~~~~~~~~g~~~-~~g~g~~~~~~i~v~Dva~ai~~~  352 (516)
T 3oh8_A          279 AEVCRDWEHATAPAS-DAGKRVAFIRTGVALSGRG----GMLPLLKTLFSTGLGG-KFGDGTSWFSWIAIDDLTDIYYRA  352 (516)
T ss_dssp             HHHHHHHHHTTHHHH-HTTCEEEEEEECEEEBTTB----SHHHHHHHTTC---CC-CCTTSCCEECEEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHH-hCCCCEEEEEeeEEECCCC----ChHHHHHHHHHhCCCc-ccCCCCceEceEeHHHHHHHHHHH
Confidence            999988888776554 4569999999999999974    2334444444333322 233344445678888877766655


Q ss_pred             ccC
Q 025755          243 IQI  245 (248)
Q Consensus       243 ~~~  245 (248)
                      +..
T Consensus       353 l~~  355 (516)
T 3oh8_A          353 IVD  355 (516)
T ss_dssp             HHC
T ss_pred             HhC
Confidence            543

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.92  E-value=1.9e-24  Score=190.24  Aligned_cols=171  Identities=22%  Similarity=0.147  Sum_probs=139.5

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCC-eEEEEEcCCCc--hhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC------
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGY-MVHGTVRDPCD--EKNAHLKKLEGASENLQLFKTDLLDYEALCAATA------   76 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~-~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~------   76 (248)
                      ++++|||||+||||+++++.|+++|+ +|++++|+..+  ......+.+.....++.++.+|++|.++++++++      
T Consensus       239 ~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~g  318 (496)
T 3mje_A          239 HGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLAELPEDA  318 (496)
T ss_dssp             CSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTCCTTS
T ss_pred             CCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHhC
Confidence            48999999999999999999999998 78888886432  2233344455556789999999999999999886      


Q ss_pred             CCCEEEEccccC-CCCCC----CCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCc
Q 025755           77 GCTGVFHVACPV-PVGKV----PNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSD  151 (248)
Q Consensus        77 ~id~vi~~ag~~-~~~~~----~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~  151 (248)
                      .+|+||||||+. .....    .+.+..++++|+.|+.++.+.+.+...++||++||..++.+.+++..           
T Consensus       319 ~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~~~~~iV~~SS~a~~~g~~g~~~-----------  387 (496)
T 3mje_A          319 PLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADLDLDAFVLFSSGAAVWGSGGQPG-----------  387 (496)
T ss_dssp             CEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTSCCSEEEEEEEHHHHTTCTTCHH-----------
T ss_pred             CCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeChHhcCCCCCcHH-----------
Confidence            379999999987 33221    23356789999999999999999988899999999988887765333           


Q ss_pred             hhhhccccchHHHHHHHHHHHHHHHHHhCCccEEEEccCeeecCCCC
Q 025755          152 EEFCKATENYYCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQ  198 (248)
Q Consensus       152 ~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~  198 (248)
                                |+.+|.+.+.+++++..+ |+++++|+||.+.++...
T Consensus       388 ----------YaAaKa~ldala~~~~~~-Gi~v~sV~pG~w~~~gm~  423 (496)
T 3mje_A          388 ----------YAAANAYLDALAEHRRSL-GLTASSVAWGTWGEVGMA  423 (496)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHT-TCCCEEEEECEESSSCC-
T ss_pred             ----------HHHHHHHHHHHHHHHHhc-CCeEEEEECCcccCCccc
Confidence                      999999999999988765 599999999999876543

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.92  E-value=2.2e-24  Score=190.11  Aligned_cols=169  Identities=19%  Similarity=0.216  Sum_probs=137.2

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCe-EEEEEcCCCch--hhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCC---
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYM-VHGTVRDPCDE--KNAHLKKLEGASENLQLFKTDLLDYEALCAATAGC---   78 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~-V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~i---   78 (248)
                      .++++|||||+||||+++++.|+++|++ |++++|+..+.  .....+.+.....++.++.+|++|.+++.++++++   
T Consensus       225 ~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i~~~  304 (486)
T 2fr1_A          225 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDD  304 (486)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHHHhc
Confidence            5789999999999999999999999995 99999986421  22223334444567899999999999999998764   


Q ss_pred             ---CEEEEccccCCCCC----CCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCc
Q 025755           79 ---TGVFHVACPVPVGK----VPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSD  151 (248)
Q Consensus        79 ---d~vi~~ag~~~~~~----~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~  151 (248)
                         |+||||||......    ..+.+..++++|+.|+.++.+++.+.+.++||++||..++++.++...           
T Consensus       305 g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~V~~SS~a~~~g~~g~~~-----------  373 (486)
T 2fr1_A          305 VPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAFGAPGLGG-----------  373 (486)
T ss_dssp             SCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHTCCTTCTT-----------
T ss_pred             CCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcChHhcCCCCCCHH-----------
Confidence               99999999865432    123446788999999999999999888899999999888877765444           


Q ss_pred             hhhhccccchHHHHHHHHHHHHHHHHHhCCccEEEEccCeeecC
Q 025755          152 EEFCKATENYYCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGP  195 (248)
Q Consensus       152 ~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~  195 (248)
                                |+.+|.+.+.++.++..+ |+++++|+||.++++
T Consensus       374 ----------Yaaaka~l~~la~~~~~~-gi~v~~i~pG~~~~~  406 (486)
T 2fr1_A          374 ----------YAPGNAYLDGLAQQRRSD-GLPATAVAWGTWAGS  406 (486)
T ss_dssp             ----------THHHHHHHHHHHHHHHHT-TCCCEEEEECCBC--
T ss_pred             ----------HHHHHHHHHHHHHHHHhc-CCeEEEEECCeeCCC
Confidence                      999999999999888765 599999999999886

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.91  E-value=1.2e-23  Score=168.90  Aligned_cols=157  Identities=20%  Similarity=0.178  Sum_probs=110.1

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCC-CeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEE
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKG-YMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVF   82 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi   82 (248)
                      ++||+|+||||+|+||+++++.|+++| ++|++++|+......     .  ...++.++.+|++|.++++++++++|+||
T Consensus        21 ~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~-----~--~~~~~~~~~~Dl~d~~~~~~~~~~~D~vv   93 (236)
T 3qvo_A           21 GHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHK-----P--YPTNSQIIMGDVLNHAALKQAMQGQDIVY   93 (236)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCS-----S--CCTTEEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred             CcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcc-----c--ccCCcEEEEecCCCHHHHHHHhcCCCEEE
Confidence            567899999999999999999999999 899999998642211     1  13478999999999999999999999999


Q ss_pred             EccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccccchH
Q 025755           83 HVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYY  162 (248)
Q Consensus        83 ~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y  162 (248)
                      |||+...              ....+.++++++++.+.++||++||..++.+.+..  ..+..+..+..      +...|
T Consensus        94 ~~a~~~~--------------~~~~~~~~~~~~~~~~~~~iV~iSS~~~~~~~~~~--~~~~~~~~~~~------~~~~~  151 (236)
T 3qvo_A           94 ANLTGED--------------LDIQANSVIAAMKACDVKRLIFVLSLGIYDEVPGK--FVEWNNAVIGE------PLKPF  151 (236)
T ss_dssp             EECCSTT--------------HHHHHHHHHHHHHHTTCCEEEEECCCCC------------------CG------GGHHH
T ss_pred             EcCCCCc--------------hhHHHHHHHHHHHHcCCCEEEEEecceecCCCCcc--cccchhhcccc------hHHHH
Confidence            9997521              11357799999999999999999997754433210  11112222111      11224


Q ss_pred             HHHHHHHHHHHHHHHHhCCccEEEEccCeeecCCC
Q 025755          163 CLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPML  197 (248)
Q Consensus       163 ~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~  197 (248)
                      ..+    |..+    .+.++++++||||.++++..
T Consensus       152 ~~~----~~~l----~~~gi~~~~vrPg~i~~~~~  178 (236)
T 3qvo_A          152 RRA----ADAI----EASGLEYTILRPAWLTDEDI  178 (236)
T ss_dssp             HHH----HHHH----HTSCSEEEEEEECEEECCSC
T ss_pred             HHH----HHHH----HHCCCCEEEEeCCcccCCCC
Confidence            433    3222    35579999999999999754

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=99.91  E-value=8.9e-24  Score=174.13  Aligned_cols=145  Identities=18%  Similarity=0.168  Sum_probs=119.7

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHC--CCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEEc
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLK--GYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFHV   84 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~~   84 (248)
                      |+|+||||+|+||+++++.|+++  |++|++++|+.....  .+.     ..++.++.+|++|.+++.++++++|+|||+
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~--~l~-----~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~   73 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKAS--TLA-----DQGVEVRHGDYNQPESLQKAFAGVSKLLFI   73 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTH--HHH-----HTTCEEEECCTTCHHHHHHHTTTCSEEEEC
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHh--HHh-----hcCCeEEEeccCCHHHHHHHHhcCCEEEEc
Confidence            57999999999999999999998  999999999864321  111     136789999999999999999999999999


Q ss_pred             cccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccccchHHH
Q 025755           85 ACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCL  164 (248)
Q Consensus        85 ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~  164 (248)
                      |+...     .   .  ++|+.++.++++++++.+.++||++||..++ ..+                       ..|+.
T Consensus        74 a~~~~-----~---~--~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~-~~~-----------------------~~y~~  119 (287)
T 2jl1_A           74 SGPHY-----D---N--TLLIVQHANVVKAARDAGVKHIAYTGYAFAE-ESI-----------------------IPLAH  119 (287)
T ss_dssp             CCCCS-----C---H--HHHHHHHHHHHHHHHHTTCSEEEEEEETTGG-GCC-----------------------STHHH
T ss_pred             CCCCc-----C---c--hHHHHHHHHHHHHHHHcCCCEEEEECCCCCC-CCC-----------------------CchHH
Confidence            98521     1   1  6799999999999999999999999997642 211                       12999


Q ss_pred             HHHHHHHHHHHHHHhCCccEEEEccCeeecCC
Q 025755          165 AKTIAEIQALEYAKRGELDIVTVCPSIVIGPM  196 (248)
Q Consensus       165 sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~  196 (248)
                      +|..+|.+++.    .+++++++||+.++++.
T Consensus       120 ~K~~~E~~~~~----~~~~~~ilrp~~~~~~~  147 (287)
T 2jl1_A          120 VHLATEYAIRT----TNIPYTFLRNALYTDFF  147 (287)
T ss_dssp             HHHHHHHHHHH----TTCCEEEEEECCBHHHH
T ss_pred             HHHHHHHHHHH----cCCCeEEEECCEecccc
Confidence            99999988753    56999999999988864

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.91  E-value=6.6e-24  Score=187.84  Aligned_cols=171  Identities=20%  Similarity=0.171  Sum_probs=137.5

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCC-eEEEEEcCCCc--hhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCC--CC
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGY-MVHGTVRDPCD--EKNAHLKKLEGASENLQLFKTDLLDYEALCAATAG--CT   79 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~-~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~--id   79 (248)
                      .++++|||||+||||+++++.|+++|+ +|++++|+..+  ......+++.....++.++.+|++|.+++++++++  +|
T Consensus       258 ~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~~~ld  337 (511)
T 2z5l_A          258 PSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALVTAYPPN  337 (511)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHHSCCS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhcCCCc
Confidence            578999999999999999999999999 58899997632  12233344544556799999999999999999875  99


Q ss_pred             EEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHHhc-CCCEEEEEeccceeccCCCCCCCCccCCCCCCchhh
Q 025755           80 GVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCVKA-KVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEF  154 (248)
Q Consensus        80 ~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~~~-~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~  154 (248)
                      +||||||+......    .+.+..++++|+.|+.++.+++.+. +.++||++||..++++.+..                
T Consensus       338 ~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~~V~~SS~a~~~g~~g~----------------  401 (511)
T 2z5l_A          338 AVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIKGLDAFVLFSSVTGTWGNAGQ----------------  401 (511)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCTTCCCEEEEEEGGGTTCCTTB----------------
T ss_pred             EEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeCHHhcCCCCCC----------------
Confidence            99999998654321    2334668899999999999999877 77899999998877776542                


Q ss_pred             hccccchHHHHHHHHHHHHHHHHHhCCccEEEEccCee-ecCCC
Q 025755          155 CKATENYYCLAKTIAEIQALEYAKRGELDIVTVCPSIV-IGPML  197 (248)
Q Consensus       155 ~~~~~~~Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i-~g~~~  197 (248)
                           ..|+.+|.+.+.+++++..+ |+++++|+||.+ .+++.
T Consensus       402 -----~~YaaaKa~ld~la~~~~~~-gi~v~sv~pG~~~~tgm~  439 (511)
T 2z5l_A          402 -----GAYAAANAALDALAERRRAA-GLPATSVAWGLWGGGGMA  439 (511)
T ss_dssp             -----HHHHHHHHHHHHHHHHHHTT-TCCCEEEEECCBCSTTCC
T ss_pred             -----HHHHHHHHHHHHHHHHHHHc-CCcEEEEECCcccCCccc
Confidence                 33999999999999887654 699999999998 44443

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=99.91  E-value=2.9e-24  Score=190.85  Aligned_cols=171  Identities=17%  Similarity=0.114  Sum_probs=137.1

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCe-EEEE-EcCCC------------chhhHHhhhhcCCCCCeEEEEccCCCHHH
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYM-VHGT-VRDPC------------DEKNAHLKKLEGASENLQLFKTDLLDYEA   70 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~-V~~~-~r~~~------------~~~~~~~~~~~~~~~~~~~~~~Di~d~~~   70 (248)
                      +++++|||||+||||+++++.|+++|++ |+++ +|+..            +......+.+.....++.++.+|++|.++
T Consensus       250 ~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~  329 (525)
T 3qp9_A          250 ADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTDAEA  329 (525)
T ss_dssp             TTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTSHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCCHHH
Confidence            5789999999999999999999999997 5566 77742            12233334444445689999999999999


Q ss_pred             HHHHhCC------CCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHHhcC-----CCEEEEEeccceeccC
Q 025755           71 LCAATAG------CTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCVKAK-----VKRVVVVSSIGAVMLN  135 (248)
Q Consensus        71 ~~~~~~~------id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~~~~-----~~~iV~vSS~~~~~~~  135 (248)
                      ++++++.      +|+||||||+......    .+.+..++++|+.|+.++.+++.+..     .++||++||..++.+.
T Consensus       330 v~~~~~~i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a~~~g~  409 (525)
T 3qp9_A          330 AARLLAGVSDAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAAIWGG  409 (525)
T ss_dssp             HHHHHHTSCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGGGTTCC
T ss_pred             HHHHHHHHHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCHHHcCCC
Confidence            9999864      6999999998765422    23356789999999999999998875     7899999999988877


Q ss_pred             CCCCCCCccCCCCCCchhhhccccchHHHHHHHHHHHHHHHHHhCCccEEEEccCeeecCCC
Q 025755          136 PNWPKGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPML  197 (248)
Q Consensus       136 ~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~  197 (248)
                      ++...                     |+.+|.+.+.++.++..+ |+++++|+||.+.+++.
T Consensus       410 ~g~~~---------------------YaaaKa~l~~lA~~~~~~-gi~v~sI~pG~~~tgm~  449 (525)
T 3qp9_A          410 AGQGA---------------------YAAGTAFLDALAGQHRAD-GPTVTSVAWSPWEGSRV  449 (525)
T ss_dssp             TTCHH---------------------HHHHHHHHHHHHTSCCSS-CCEEEEEEECCBTTSGG
T ss_pred             CCCHH---------------------HHHHHHHHHHHHHHHHhC-CCCEEEEECCccccccc
Confidence            65333                     999999999998877655 69999999999977665

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.90  E-value=4.7e-24  Score=180.60  Aligned_cols=155  Identities=14%  Similarity=0.075  Sum_probs=119.6

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCc--hhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC--CCC
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCD--EKNAHLKKLEGASENLQLFKTDLLDYEALCAATA--GCT   79 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~--~id   79 (248)
                      |++|+|+||||||+||+++++.|+++|++|++++|+...  .....+..+.  ..++.++.+|+.|.+++.++++  ++|
T Consensus         8 M~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~--~~~v~~~~~Dl~d~~~l~~~~~~~~~d   85 (346)
T 3i6i_A            8 SPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALE--DKGAIIVYGLINEQEAMEKILKEHEID   85 (346)
T ss_dssp             ---CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHH--HTTCEEEECCTTCHHHHHHHHHHTTCC
T ss_pred             CCCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHH--hCCcEEEEeecCCHHHHHHHHhhCCCC
Confidence            456799999999999999999999999999999997622  1112122222  2578999999999999999999  999


Q ss_pred             EEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcC-CCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccc
Q 025755           80 GVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAK-VKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKAT  158 (248)
Q Consensus        80 ~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~-~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~  158 (248)
                      +|||+|+..               |+.++.+++++|++.+ ++++|+ |+.    +       ...+|+.+..+      
T Consensus        86 ~Vi~~a~~~---------------n~~~~~~l~~aa~~~g~v~~~v~-S~~----g-------~~~~e~~~~~p------  132 (346)
T 3i6i_A           86 IVVSTVGGE---------------SILDQIALVKAMKAVGTIKRFLP-SEF----G-------HDVNRADPVEP------  132 (346)
T ss_dssp             EEEECCCGG---------------GGGGHHHHHHHHHHHCCCSEEEC-SCC----S-------SCTTTCCCCTT------
T ss_pred             EEEECCchh---------------hHHHHHHHHHHHHHcCCceEEee-ccc----C-------CCCCccCcCCC------
Confidence            999999862               7888999999999998 899886 431    1       11234333333      


Q ss_pred             cchHHHHHHHHHHHHHHHHHhCCccEEEEccCeeecCCC
Q 025755          159 ENYYCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPML  197 (248)
Q Consensus       159 ~~~Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~  197 (248)
                      .+.|+.+|..+|.++++    .+++++++|||.++|...
T Consensus       133 ~~~y~~sK~~~e~~l~~----~g~~~tivrpg~~~g~~~  167 (346)
T 3i6i_A          133 GLNMYREKRRVRQLVEE----SGIPFTYICCNSIASWPY  167 (346)
T ss_dssp             HHHHHHHHHHHHHHHHH----TTCCBEEEECCEESSCCC
T ss_pred             cchHHHHHHHHHHHHHH----cCCCEEEEEecccccccC
Confidence            34599999998887765    469999999999999653

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=99.90  E-value=6.2e-24  Score=176.25  Aligned_cols=203  Identities=17%  Similarity=0.137  Sum_probs=140.1

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEEccc
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFHVAC   86 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~~ag   86 (248)
                      |+|||||||||||++++++|+++||+|+++.|++..             .++   ..    .+.....++++|.|||+|+
T Consensus         1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~-------------~~~---~~----~~~~~~~l~~~d~vihla~   60 (298)
T 4b4o_A            1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGP-------------GRI---TW----DELAASGLPSCDAAVNLAG   60 (298)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCT-------------TEE---EH----HHHHHHCCCSCSEEEECCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCc-------------Cee---ec----chhhHhhccCCCEEEEecc
Confidence            479999999999999999999999999999997631             111   11    2233455678999999998


Q ss_pred             cCCCCC----CCCccccchhhhHHHHHHHHHHHHhcCC--CEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccccc
Q 025755           87 PVPVGK----VPNPEVQLIDPAVVGTKNVLNSCVKAKV--KRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATEN  160 (248)
Q Consensus        87 ~~~~~~----~~~~~~~~~~~n~~g~~~~~~~~~~~~~--~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~  160 (248)
                      ..-...    .......+++.|+.++.++++++...+.  ..+|+.||.. +|+...   ..+++|+++..+.      .
T Consensus        61 ~~i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~~~~~~~i~~Ss~~-vyg~~~---~~~~~E~~p~~~~------~  130 (298)
T 4b4o_A           61 ENILNPLRRWNETFQKEVLGSRLETTQLLAKAITKAPQPPKAWVLVTGVA-YYQPSL---TAEYDEDSPGGDF------D  130 (298)
T ss_dssp             CCSSCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCCSEEEEEEEGG-GSCCCS---SCCBCTTCCCSCS------S
T ss_pred             CcccchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHhCCCceEEEEEeeee-eecCCC---CCcccccCCcccc------c
Confidence            532211    1122246789999999999999998754  4577777754 565533   5667787775543      3


Q ss_pred             hHHHHHHHHHHHHHHHHHhCCccEEEEccCeeecCCCCCCCCccHHHHHHHHcCCCCCCCCCchhhhhhhhhccceeEEE
Q 025755          161 YYCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKGFFFTTPSHSYMLERTLVLNQGVRLYR  240 (248)
Q Consensus       161 ~Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~l~vd~g~~~~~  240 (248)
                      .|+..|...|...  +....+++++++||+.+|||...    ....++.....+.... .+++....+.+||||.+.++.
T Consensus       131 ~~~~~~~~~e~~~--~~~~~~~~~~~~r~~~v~g~~~~----~~~~~~~~~~~~~~~~-~g~g~~~~~~ihv~Dva~a~~  203 (298)
T 4b4o_A          131 FFSNLVTKWEAAA--RLPGDSTRQVVVRSGVVLGRGGG----AMGHMLLPFRLGLGGP-IGSGHQFFPWIHIGDLAGILT  203 (298)
T ss_dssp             HHHHHHHHHHHHH--CCSSSSSEEEEEEECEEECTTSH----HHHHHHHHHHTTCCCC-BTTSCSBCCEEEHHHHHHHHH
T ss_pred             hhHHHHHHHHHHH--HhhccCCceeeeeeeeEEcCCCC----chhHHHHHHhcCCcce-ecccCceeecCcHHHHHHHHH
Confidence            3766666555432  33445799999999999999742    3445555555554332 234444556799999988887


Q ss_pred             eeccCC
Q 025755          241 CKIQIP  246 (248)
Q Consensus       241 ~~~~~p  246 (248)
                      .+++.|
T Consensus       204 ~~~~~~  209 (298)
T 4b4o_A          204 HALEAN  209 (298)
T ss_dssp             HHHHCT
T ss_pred             HHHhCC
Confidence            777654

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.90  E-value=6.7e-23  Score=170.04  Aligned_cols=156  Identities=17%  Similarity=0.086  Sum_probs=123.0

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCC-CeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEEc
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKG-YMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFHV   84 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~~   84 (248)
                      +|+|+||||||+||+++++.|+++| ++|++++|+........+.     ..++.++.+|+.|.+++.++++++|+|||+
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~~~l~-----~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~   79 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELR-----LQGAEVVQGDQDDQVIMELALNGAYATFIV   79 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHHHHHH-----HTTCEEEECCTTCHHHHHHHHTTCSEEEEC
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHHHHHH-----HCCCEEEEecCCCHHHHHHHHhcCCEEEEe
Confidence            5899999999999999999999998 9999999987533222221     146889999999999999999999999999


Q ss_pred             cccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccccchHHH
Q 025755           85 ACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCL  164 (248)
Q Consensus        85 ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~  164 (248)
                      ++....        ...+.|+.++.++++++++.+.++||++||.. .++...         ..         +...|+.
T Consensus        80 a~~~~~--------~~~~~~~~~~~~~~~aa~~~gv~~iv~~S~~~-~~~~~~---------~~---------~~~~y~~  132 (299)
T 2wm3_A           80 TNYWES--------CSQEQEVKQGKLLADLARRLGLHYVVYSGLEN-IKKLTA---------GR---------LAAAHFD  132 (299)
T ss_dssp             CCHHHH--------TCHHHHHHHHHHHHHHHHHHTCSEEEECCCCC-HHHHTT---------TS---------CCCHHHH
T ss_pred             CCCCcc--------ccchHHHHHHHHHHHHHHHcCCCEEEEEcCcc-ccccCC---------Cc---------ccCchhh
Confidence            985321        12467888999999999999999999977643 443211         00         1234999


Q ss_pred             HHHHHHHHHHHHHHhCCccEEEEccCeeecCCC
Q 025755          165 AKTIAEIQALEYAKRGELDIVTVCPSIVIGPML  197 (248)
Q Consensus       165 sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~  197 (248)
                      +|..+|.++++    .+++++++|||+++|+..
T Consensus       133 sK~~~e~~~~~----~gi~~~ilrp~~~~~~~~  161 (299)
T 2wm3_A          133 GKGEVEEYFRD----IGVPMTSVRLPCYFENLL  161 (299)
T ss_dssp             HHHHHHHHHHH----HTCCEEEEECCEEGGGGG
T ss_pred             HHHHHHHHHHH----CCCCEEEEeecHHhhhch
Confidence            99999988765    359999999999999753

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.90  E-value=1.2e-22  Score=172.51  Aligned_cols=152  Identities=16%  Similarity=0.137  Sum_probs=119.7

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEcc-CCCHHHHHHHhCCCCEEE
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTD-LLDYEALCAATAGCTGVF   82 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D-i~d~~~~~~~~~~id~vi   82 (248)
                      +++|+|+||||||+||+++++.|+++|++|++++|+........+.   . ..++.++.+| ++|.+++.++++++|+||
T Consensus         3 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~l~---~-~~~v~~v~~D~l~d~~~l~~~~~~~d~Vi   78 (352)
T 1xgk_A            3 QQKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQ---A-IPNVTLFQGPLLNNVPLMDTLFEGAHLAF   78 (352)
T ss_dssp             CCCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHH---T-STTEEEEESCCTTCHHHHHHHHTTCSEEE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhHHHHh---h-cCCcEEEECCccCCHHHHHHHHhcCCEEE
Confidence            5578999999999999999999999999999999987543212121   1 2468899999 999999999999999999


Q ss_pred             EccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcC-CCEEEEEeccc-eeccCCCCCCCCccCCCCCCchhhhccccc
Q 025755           83 HVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAK-VKRVVVVSSIG-AVMLNPNWPKGQVMDEECWSDEEFCKATEN  160 (248)
Q Consensus        83 ~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~-~~~iV~vSS~~-~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~  160 (248)
                      ||++...           .+.|..+ .++++++++.+ +++|||+||.. ..++...                     .+
T Consensus        79 ~~a~~~~-----------~~~~~~~-~~l~~aa~~~g~v~~~V~~SS~~~~~~~~~~---------------------~~  125 (352)
T 1xgk_A           79 INTTSQA-----------GDEIAIG-KDLADAAKRAGTIQHYIYSSMPDHSLYGPWP---------------------AV  125 (352)
T ss_dssp             ECCCSTT-----------SCHHHHH-HHHHHHHHHHSCCSEEEEEECCCGGGTSSCC---------------------CC
T ss_pred             EcCCCCC-----------cHHHHHH-HHHHHHHHHcCCccEEEEeCCccccccCCCC---------------------Cc
Confidence            9987532           1347776 99999999998 89999999965 2222110                     12


Q ss_pred             hHHHHHHHHHHHHHHHHHhCCccEEEEccCeeecCCC
Q 025755          161 YYCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPML  197 (248)
Q Consensus       161 ~Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~  197 (248)
                      .|+.+|..+|.+++..    +++++++||+ +||+..
T Consensus       126 ~y~~sK~~~E~~~~~~----gi~~~ivrpg-~~g~~~  157 (352)
T 1xgk_A          126 PMWAPKFTVENYVRQL----GLPSTFVYAG-IYNNNF  157 (352)
T ss_dssp             TTTHHHHHHHHHHHTS----SSCEEEEEEC-EEGGGC
T ss_pred             cHHHHHHHHHHHHHHc----CCCEEEEecc-eecCCc
Confidence            3999999999888653    6999999987 577754

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=99.90  E-value=5.1e-23  Score=200.27  Aligned_cols=208  Identities=13%  Similarity=0.047  Sum_probs=145.1

Q ss_pred             CCCCcEEEEEcCccH-HHHHHHHHHHHCCCeEEEEE-cCCCchhhHHh----hhhcCCCCCeEEEEccCCCHHHHHHHhC
Q 025755            3 GEDKERVCVTGAGGY-IASWLVKYLLLKGYMVHGTV-RDPCDEKNAHL----KKLEGASENLQLFKTDLLDYEALCAATA   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~-iG~~~~~~l~~~g~~V~~~~-r~~~~~~~~~~----~~~~~~~~~~~~~~~Di~d~~~~~~~~~   76 (248)
                      ++++|++|||||++| ||+++++.|+++|++|++++ |+.. ......    +.+.....++.++.+|++|.++++++++
T Consensus       672 ~l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~-~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv~  750 (1887)
T 2uv8_A          672 TFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSK-QVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIE  750 (1887)
T ss_dssp             CCTTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCH-HHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHH-HHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHHH
Confidence            478999999999998 99999999999999999985 5442 222222    2222234578999999999999888763


Q ss_pred             -------------CCCEEEEccccCCCC-CC------CCccccchhhhHHHHHHHHHHHHhc------CCCEEEEEeccc
Q 025755           77 -------------GCTGVFHVACPVPVG-KV------PNPEVQLIDPAVVGTKNVLNSCVKA------KVKRVVVVSSIG  130 (248)
Q Consensus        77 -------------~id~vi~~ag~~~~~-~~------~~~~~~~~~~n~~g~~~~~~~~~~~------~~~~iV~vSS~~  130 (248)
                                   .+|+||||||+.... ..      .+.+..++++|+.++.++++.++..      +.++||++||..
T Consensus       751 ~i~~~~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~IVnISS~a  830 (1887)
T 2uv8_A          751 FIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNH  830 (1887)
T ss_dssp             HHHSCTTTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEEEEECSCT
T ss_pred             HHHHhccccccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEEEEEcChH
Confidence                         589999999986543 11      1345778999999999999987432      237999999987


Q ss_pred             eeccCCCCCCCCccCCCCCCchhhhccccchHHHHHHHHHHH-HHHHHHhCC--ccEEEEccCeee-cCCCCCCCCccHH
Q 025755          131 AVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAKTIAEIQ-ALEYAKRGE--LDIVTVCPSIVI-GPMLQPTINTSSL  206 (248)
Q Consensus       131 ~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~l-~~~~~~~~~--i~v~~vrpg~i~-g~~~~~~~~~~~~  206 (248)
                      +..+  ...                     .|+.||++.+.+ .+.++.+.+  |+||+|+||++. +++.... .....
T Consensus       831 g~~g--g~~---------------------aYaASKAAL~~Lttr~lA~ela~~IrVNaV~PG~V~tT~m~~~~-~~~~~  886 (1887)
T 2uv8_A          831 GTFG--GDG---------------------MYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRGTGLMSAN-NIIAE  886 (1887)
T ss_dssp             TCSS--CBT---------------------THHHHHHHGGGHHHHHHHSSCTTTEEEEEEEECCEECC-----C-CTTHH
T ss_pred             hccC--CCc---------------------hHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEecccccccccccc-hhHHH
Confidence            6554  112                     299999877776 555544332  999999999999 5654321 11111


Q ss_pred             H-------------HHHHHcCCCCCCCC-Cchhhhhhhhhc--ccee
Q 025755          207 L-------------LLGFLKGFFFTTPS-HSYMLERTLVLN--QGVR  237 (248)
Q Consensus       207 ~-------------~~~~~~~~~l~~~~-~~~~~g~~l~vd--~g~~  237 (248)
                      .             +.....  ++.++. ..|++|+++.+|  ||..
T Consensus       887 ~~~~~plr~~sPEEVA~avl--fLaSd~~as~iTGq~I~VDVDGG~~  931 (1887)
T 2uv8_A          887 GIEKMGVRTFSQKEMAFNLL--GLLTPEVVELCQKSPVMADLNGGLQ  931 (1887)
T ss_dssp             HHHTTSCCCEEHHHHHHHHH--GGGSHHHHHHHHHSCEEEEESCSTT
T ss_pred             HHHhcCCCCCCHHHHHHHHH--HHhCCCccccccCcEEEEECCCCee
Confidence            1             111111  666666 579999999886  8854

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=99.90  E-value=2.6e-23  Score=177.70  Aligned_cols=175  Identities=15%  Similarity=-0.016  Sum_probs=125.9

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHH-CCCeEEEEEcCCCchhh----------H-HhhhhcCCCCCeEEEEccCCCHHHHH
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLL-KGYMVHGTVRDPCDEKN----------A-HLKKLEGASENLQLFKTDLLDYEALC   72 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~-~g~~V~~~~r~~~~~~~----------~-~~~~~~~~~~~~~~~~~Di~d~~~~~   72 (248)
                      .+|++|||||++|||+++++.|++ +|++|++++|+......          . ..+.+.....++..+.+|++|.++++
T Consensus        60 ~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvtd~~~v~  139 (422)
T 3s8m_A           60 GPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAFSDAARA  139 (422)
T ss_dssp             SCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHH
T ss_pred             CCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCCCHHHHH
Confidence            479999999999999999999999 99999999997653321          1 11223333567889999999998877


Q ss_pred             HHh--------CCCCEEEEccccC-------------CCCC-------------------------CCCccccchhhhHH
Q 025755           73 AAT--------AGCTGVFHVACPV-------------PVGK-------------------------VPNPEVQLIDPAVV  106 (248)
Q Consensus        73 ~~~--------~~id~vi~~ag~~-------------~~~~-------------------------~~~~~~~~~~~n~~  106 (248)
                      +++        .++|++|||||..             ....                         ..++|...+++|..
T Consensus       140 ~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~v~Vn~~  219 (422)
T 3s8m_A          140 QVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITVMGG  219 (422)
T ss_dssp             HHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSS
T ss_pred             HHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHHHHhhch
Confidence            665        4589999999862             1110                         11233456677766


Q ss_pred             HHH-HHHHHHHhc----CCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccccchHHHHHH----HHHHHHHHHH
Q 025755          107 GTK-NVLNSCVKA----KVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAKT----IAEIQALEYA  177 (248)
Q Consensus       107 g~~-~~~~~~~~~----~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~----~~e~l~~~~~  177 (248)
                      +.. .+++++...    +.++||++||..+..+.+.+                   ....|+.||+    +++.++.+++
T Consensus       220 ~~~~~~~~a~~~~~m~~~gG~IVniSSi~g~~~~p~~-------------------~~~aY~ASKaAl~~lTrsLA~Ela  280 (422)
T 3s8m_A          220 QDWELWIDALEGAGVLADGARSVAFSYIGTEITWPIY-------------------WHGALGKAKVDLDRTAQRLNARLA  280 (422)
T ss_dssp             HHHHHHHHHHHHTTCEEEEEEEEEEEECCCGGGHHHH-------------------TSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHhhCCCEEEEEeCchhhccCCCc-------------------cchHHHHHHHHHHHHHHHHHHHhC
Confidence            665 666666543    24799999998765544321                   0134999995    7777777777


Q ss_pred             HhCCccEEEEccCeeecCCCCC
Q 025755          178 KRGELDIVTVCPSIVIGPMLQP  199 (248)
Q Consensus       178 ~~~~i~v~~vrpg~i~g~~~~~  199 (248)
                      ++ |||||+|+||.+.+|+...
T Consensus       281 ~~-GIRVNaVaPG~i~T~~~~~  301 (422)
T 3s8m_A          281 KH-GGGANVAVLKSVVTQASAA  301 (422)
T ss_dssp             TT-TCEEEEEEECCCCCTTGGG
T ss_pred             cc-CEEEEEEEcCCCcChhhhc
Confidence            75 5999999999999998653

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=99.90  E-value=7.5e-24  Score=182.17  Aligned_cols=214  Identities=10%  Similarity=-0.013  Sum_probs=144.0

Q ss_pred             CCCcEEEEEcCccHHHHH--HHHHHHHCCCeEEEEEcCCCchh----------hHHhh-hhcCCCCCeEEEEccCCCHHH
Q 025755            4 EDKERVCVTGAGGYIASW--LVKYLLLKGYMVHGTVRDPCDEK----------NAHLK-KLEGASENLQLFKTDLLDYEA   70 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~--~~~~l~~~g~~V~~~~r~~~~~~----------~~~~~-~~~~~~~~~~~~~~Di~d~~~   70 (248)
                      ..+|++|||||++|||++  +++.|+++|++|++++|+.....          ....+ .......++..+.+|++|.++
T Consensus        58 ~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd~~~  137 (418)
T 4eue_A           58 RGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFSNET  137 (418)
T ss_dssp             CCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTCHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCCHHH
Confidence            468999999999999999  99999999999999999764321          11222 222335678899999999998


Q ss_pred             HHHHhC-------CCCEEEEccccCC-------------CCC-------------------------CCCccccchhhhH
Q 025755           71 LCAATA-------GCTGVFHVACPVP-------------VGK-------------------------VPNPEVQLIDPAV  105 (248)
Q Consensus        71 ~~~~~~-------~id~vi~~ag~~~-------------~~~-------------------------~~~~~~~~~~~n~  105 (248)
                      ++++++       ++|++|||||...             ...                         ..+.|...+++|.
T Consensus       138 v~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~~~vn~  217 (418)
T 4eue_A          138 KDKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEETRKVMG  217 (418)
T ss_dssp             HHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHHhh
Confidence            888765       5899999999741             000                         1122344566666


Q ss_pred             HHHH-HHHHHHHhc----CCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccccchHHHHHH----HHHHHHHHH
Q 025755          106 VGTK-NVLNSCVKA----KVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAKT----IAEIQALEY  176 (248)
Q Consensus       106 ~g~~-~~~~~~~~~----~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~----~~e~l~~~~  176 (248)
                      .+.. .+++++...    +.++||++||..+..+.+.+.                   ...|+.||+    +++.++.++
T Consensus       218 ~~~~~~~~~~l~~~~~~~~gg~IV~iSSi~~~~~~p~~~-------------------~~aY~ASKaAL~~ltrsLA~EL  278 (418)
T 4eue_A          218 GEDWQEWCEELLYEDCFSDKATTIAYSYIGSPRTYKIYR-------------------EGTIGIAKKDLEDKAKLINEKL  278 (418)
T ss_dssp             SHHHHHHHHHHHHTTCEEEEEEEEEEECCCCGGGTTTTT-------------------TSHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhhcCCcEEEEEeCchhcCCCCccc-------------------cHHHHHHHHHHHHHHHHHHHHh
Confidence            6555 556665543    247999999988766655430                   123999995    788888888


Q ss_pred             HH-hCCccEEEEccCeeecCCCCCCCCcc--HHHHHHHHc--CC---------CCCCCCCchhhhhhhhhccceeEE
Q 025755          177 AK-RGELDIVTVCPSIVIGPMLQPTINTS--SLLLLGFLK--GF---------FFTTPSHSYMLERTLVLNQGVRLY  239 (248)
Q Consensus       177 ~~-~~~i~v~~vrpg~i~g~~~~~~~~~~--~~~~~~~~~--~~---------~l~~~~~~~~~g~~l~vd~g~~~~  239 (248)
                      ++ .+ ||||+|+||.+.+++....+...  ...+.+.++  |.         +|.  .+.+.+|++|.+|++..+.
T Consensus       279 a~~~G-IrVN~V~PG~v~T~~s~~ip~~p~y~~~~~~~mk~~G~~E~v~e~~~~L~--sd~~~~g~~~~~D~~~~~r  352 (418)
T 4eue_A          279 NRVIG-GRAFVSVNKALVTKASAYIPTFPLYAAILYKVMKEKNIHENCIMQIERMF--SEKIYSNEKIQFDDKGRLR  352 (418)
T ss_dssp             HHHHS-CEEEEEECCCCCCHHHHTSTTHHHHHHHHHHHHHHTTCCCCHHHHHHHHH--HHTTSSSSCCCCCTTSCEE
T ss_pred             CCccC-eEEEEEECCcCcChhhhcCCCCcHHHHHHHHHHhhcCChHHHHHHHHHHh--hccccCCCccccCCCceee
Confidence            87 65 99999999999998654321110  111122221  11         232  2356678888999876654

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.89  E-value=3.7e-22  Score=164.71  Aligned_cols=144  Identities=13%  Similarity=0.163  Sum_probs=111.0

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHC-CCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEEcc
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLK-GYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFHVA   85 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~~a   85 (248)
                      |+|+||||||+||+++++.|++. |++|++++|+......     +  ...++.++.+|++|.+++.++++++|+|||+|
T Consensus         1 M~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~-----~--~~~~v~~~~~D~~d~~~l~~~~~~~d~vi~~a   73 (289)
T 3e48_A            1 MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPD-----D--WRGKVSVRQLDYFNQESMVEAFKGMDTVVFIP   73 (289)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCG-----G--GBTTBEEEECCTTCHHHHHHHTTTCSEEEECC
T ss_pred             CEEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHH-----h--hhCCCEEEEcCCCCHHHHHHHHhCCCEEEEeC
Confidence            37999999999999999999998 9999999998743211     1  13578999999999999999999999999999


Q ss_pred             ccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccccchHHHH
Q 025755           86 CPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLA  165 (248)
Q Consensus        86 g~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~s  165 (248)
                      +....          ...|+.++.+++++|++.++++|||+||.......    +                     |..+
T Consensus        74 ~~~~~----------~~~~~~~~~~l~~aa~~~gv~~iv~~Ss~~~~~~~----~---------------------~~~~  118 (289)
T 3e48_A           74 SIIHP----------SFKRIPEVENLVYAAKQSGVAHIIFIGYYADQHNN----P---------------------FHMS  118 (289)
T ss_dssp             CCCCS----------HHHHHHHHHHHHHHHHHTTCCEEEEEEESCCSTTC----C---------------------STTH
T ss_pred             CCCcc----------chhhHHHHHHHHHHHHHcCCCEEEEEcccCCCCCC----C---------------------Cccc
Confidence            86432          24589999999999999999999999994321110    1                     2222


Q ss_pred             H--HHHHHHHHHHHHhCCccEEEEccCeeecCC
Q 025755          166 K--TIAEIQALEYAKRGELDIVTVCPSIVIGPM  196 (248)
Q Consensus       166 K--~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~  196 (248)
                      +  ...|..    ..+.+++++++|||+++|+.
T Consensus       119 ~~~~~~e~~----~~~~g~~~~ilrp~~~~~~~  147 (289)
T 3e48_A          119 PYFGYASRL----LSTSGIDYTYVRMAMYMDPL  147 (289)
T ss_dssp             HHHHHHHHH----HHHHCCEEEEEEECEESTTH
T ss_pred             hhHHHHHHH----HHHcCCCEEEEecccccccc
Confidence            3  222222    22346999999999999874

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=99.88  E-value=1.6e-22  Score=166.50  Aligned_cols=141  Identities=18%  Similarity=0.213  Sum_probs=111.6

Q ss_pred             EEEEEcCccHHHHHHHHHHHHC--CCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEEcc
Q 025755            8 RVCVTGAGGYIASWLVKYLLLK--GYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFHVA   85 (248)
Q Consensus         8 ~vlVtG~~g~iG~~~~~~l~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~~a   85 (248)
                      +|+||||+|+||++++++|+++  |++|++++|+.....  .+.     ..++.++.+|++|.+++.++++++|+|||+|
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~--~~~-----~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a   73 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQ--ALA-----AQGITVRQADYGDEAALTSALQGVEKLLLIS   73 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCH--HHH-----HTTCEEEECCTTCHHHHHHHTTTCSEEEECC
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhh--hhh-----cCCCeEEEcCCCCHHHHHHHHhCCCEEEEeC
Confidence            5899999999999999999998  999999999864321  111     1367899999999999999999999999999


Q ss_pred             ccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccccchHHHH
Q 025755           86 CPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLA  165 (248)
Q Consensus        86 g~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~s  165 (248)
                      +...            +.|+.++.+++++|++.+.++||++||..++ ..+                       ..|+.+
T Consensus        74 ~~~~------------~~~~~~~~~l~~a~~~~~~~~~v~~Ss~~~~-~~~-----------------------~~y~~s  117 (286)
T 2zcu_A           74 SSEV------------GQRAPQHRNVINAAKAAGVKFIAYTSLLHAD-TSP-----------------------LGLADE  117 (286)
T ss_dssp             --------------------CHHHHHHHHHHHHTCCEEEEEEETTTT-TCC-----------------------STTHHH
T ss_pred             CCCc------------hHHHHHHHHHHHHHHHcCCCEEEEECCCCCC-CCc-----------------------chhHHH
Confidence            8521            1478899999999999999999999997643 110                       129999


Q ss_pred             HHHHHHHHHHHHHhCCccEEEEccCeeecC
Q 025755          166 KTIAEIQALEYAKRGELDIVTVCPSIVIGP  195 (248)
Q Consensus       166 K~~~e~l~~~~~~~~~i~v~~vrpg~i~g~  195 (248)
                      |..+|.+++.    .+++++++||+.++++
T Consensus       118 K~~~e~~~~~----~~~~~~ilrp~~~~~~  143 (286)
T 2zcu_A          118 HIETEKMLAD----SGIVYTLLRNGWYSEN  143 (286)
T ss_dssp             HHHHHHHHHH----HCSEEEEEEECCBHHH
T ss_pred             HHHHHHHHHH----cCCCeEEEeChHHhhh
Confidence            9999988764    3599999999887665

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=99.88  E-value=1.6e-23  Score=198.35  Aligned_cols=209  Identities=12%  Similarity=0.051  Sum_probs=144.5

Q ss_pred             CCCCcEEEEEcCccH-HHHHHHHHHHHCCCeEEEEE-cCCCchhhHHhhhh----cCCCCCeEEEEccCCCHHHHHHHhC
Q 025755            3 GEDKERVCVTGAGGY-IASWLVKYLLLKGYMVHGTV-RDPCDEKNAHLKKL----EGASENLQLFKTDLLDYEALCAATA   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~-iG~~~~~~l~~~g~~V~~~~-r~~~~~~~~~~~~~----~~~~~~~~~~~~Di~d~~~~~~~~~   76 (248)
                      ++++|++|||||++| ||+++++.|+++|++|++++ |+... .....+.+    .....++.++.+|++|.++++++++
T Consensus       473 sL~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~-lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaLVe  551 (1688)
T 2pff_A          473 TFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQ-VTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIE  551 (1688)
T ss_dssp             CCCSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTT-TTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHHHH
T ss_pred             ccCCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHH-HHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHHHH
Confidence            377899999999998 99999999999999999984 55432 22222222    1224568899999999998888763


Q ss_pred             -------------CCCEEEEccccCCCC-CC------CCccccchhhhHHHHHHHHHHHH--hc----CCCEEEEEeccc
Q 025755           77 -------------GCTGVFHVACPVPVG-KV------PNPEVQLIDPAVVGTKNVLNSCV--KA----KVKRVVVVSSIG  130 (248)
Q Consensus        77 -------------~id~vi~~ag~~~~~-~~------~~~~~~~~~~n~~g~~~~~~~~~--~~----~~~~iV~vSS~~  130 (248)
                                   .+|+||||||+.... ..      .+.+..++++|+.++.+++++++  +.    +.++||++||..
T Consensus       552 ~I~e~~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krggGrIVnISSiA  631 (1688)
T 2pff_A          552 FIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNH  631 (1688)
T ss_dssp             HHHSCTTSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCEEECCCCCSCT
T ss_pred             HHHHhccccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCCCEEEEEEChH
Confidence                         489999999976443 11      13457789999999999998873  22    236999999977


Q ss_pred             eeccCCCCCCCCccCCCCCCchhhhccccchHHHHHHHHHHH-HHHHHHhC--CccEEEEccCeee-cCCCCCCC---Cc
Q 025755          131 AVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAKTIAEIQ-ALEYAKRG--ELDIVTVCPSIVI-GPMLQPTI---NT  203 (248)
Q Consensus       131 ~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~l-~~~~~~~~--~i~v~~vrpg~i~-g~~~~~~~---~~  203 (248)
                      +..+  ...                     .|+.||++.+.+ .+.++.+.  +|+||+|+||++. +++.....   ..
T Consensus       632 G~~G--g~s---------------------aYaASKAAL~aLttrsLAeEla~~IRVNaVaPG~V~TT~M~~~~e~~~~~  688 (1688)
T 2pff_A          632 GTFG--GDG---------------------MYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRGTGLMSANNIIAEG  688 (1688)
T ss_dssp             TTSS--CBT---------------------THHHHHHHHTHHHHHTTTSSCTTTEECCCCCCCCCCCCSSSCTTTTCSTT
T ss_pred             hccC--Cch---------------------HHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEECcCcCCcccCCchHHHHH
Confidence            6544  112                     299999988887 34333322  2999999999999 46532110   00


Q ss_pred             ---------cHHHHHHHHcCCCCCCCC-Cchhhhhhhhhc--ccee
Q 025755          204 ---------SSLLLLGFLKGFFFTTPS-HSYMLERTLVLN--QGVR  237 (248)
Q Consensus       204 ---------~~~~~~~~~~~~~l~~~~-~~~~~g~~l~vd--~g~~  237 (248)
                               .+..+.....  ++.++. ..|++|+++.+|  ||..
T Consensus       689 l~~iplR~~sPEEVA~aIl--FLaSd~sAs~ITGq~I~VDVDGG~~  732 (1688)
T 2pff_A          689 IEKMGVRTFSQKEMAFNLL--GLLTPEVVELCQKSPVMADLNGGLQ  732 (1688)
T ss_dssp             TSSSSCCCCCCCTTHHHHH--HHTSTTHHHHHTTSCCCCCCSCSGG
T ss_pred             HHhCCCCCCCHHHHHHHHH--HHhCCCccccccCcEEEEEcCCCee
Confidence                     0000000010  566666 579999999876  8865

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=99.88  E-value=3.5e-22  Score=194.14  Aligned_cols=211  Identities=12%  Similarity=0.037  Sum_probs=146.2

Q ss_pred             CCCCcEEEEEcCccH-HHHHHHHHHHHCCCeEEEEEcCCCchhhHHh----hhhcCCCCCeEEEEccCCCHHHHHHHhC-
Q 025755            3 GEDKERVCVTGAGGY-IASWLVKYLLLKGYMVHGTVRDPCDEKNAHL----KKLEGASENLQLFKTDLLDYEALCAATA-   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~-iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~~~~~~Di~d~~~~~~~~~-   76 (248)
                      ++++|++|||||++| ||+++++.|+++|++|+++++...+......    ..+.....++.++.+|++|.++++++++ 
T Consensus       649 ~L~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv~~  728 (1878)
T 2uv9_A          649 TFQGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALVNY  728 (1878)
T ss_dssp             CCTTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHH
Confidence            378899999999999 9999999999999999998644322222111    2233334578999999999999888763 


Q ss_pred             ----------CCCEEEEccccCCCC-C---CC---CccccchhhhHHHHHHHHHHH--Hhc----CCCEEEEEeccceec
Q 025755           77 ----------GCTGVFHVACPVPVG-K---VP---NPEVQLIDPAVVGTKNVLNSC--VKA----KVKRVVVVSSIGAVM  133 (248)
Q Consensus        77 ----------~id~vi~~ag~~~~~-~---~~---~~~~~~~~~n~~g~~~~~~~~--~~~----~~~~iV~vSS~~~~~  133 (248)
                                .+|+||||||+.... .   ..   +.+..++++|+.++.++++.+  .+.    +.++||++||..+..
T Consensus       729 i~~~~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G~IVnISS~ag~~  808 (1878)
T 2uv9_A          729 IYDTKNGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPAQVILPLSPNHGTF  808 (1878)
T ss_dssp             HHCSSSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCEEECCEECSCSSSS
T ss_pred             HHHhhcccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCEEEEEcchhhcc
Confidence                      589999999986543 1   12   345778999999999888763  222    347999999987665


Q ss_pred             cCCCCCCCCccCCCCCCchhhhccccchHHHHHHHHHHHHHHHHHh-C--CccEEEEccCeee-cCCCCCCC--------
Q 025755          134 LNPNWPKGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKR-G--ELDIVTVCPSIVI-GPMLQPTI--------  201 (248)
Q Consensus       134 ~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~-~--~i~v~~vrpg~i~-g~~~~~~~--------  201 (248)
                      +.  ...                     |+.||++.+.++..+..+ .  +|+||+|+||++. +++.....        
T Consensus       809 gg--~~a---------------------YaASKAAL~aLt~~laAeEla~~IrVNaVaPG~V~gT~m~~~~~~~~~~~~~  865 (1878)
T 2uv9_A          809 GN--DGL---------------------YSESKLALETLFNRWYSESWGNYLTICGAVIGWTRGTGLMSANNLVAEGVEK  865 (1878)
T ss_dssp             SC--CSS---------------------HHHHHHHHTTHHHHHHHSTTTTTEEEEEEEECCBCCTTSCSHHHHTHHHHHT
T ss_pred             CC--chH---------------------HHHHHHHHHHHHHHHHHHHcCCCeEEEEEEecceecCcccccchhhHHHHHh
Confidence            42  222                     999998777776554332 1  2999999999999 77643200        


Q ss_pred             ----CccHHHHHHHHcCCCCCCCCC-chhhhhhhhhc--cceeE
Q 025755          202 ----NTSSLLLLGFLKGFFFTTPSH-SYMLERTLVLN--QGVRL  238 (248)
Q Consensus       202 ----~~~~~~~~~~~~~~~l~~~~~-~~~~g~~l~vd--~g~~~  238 (248)
                          ...+..+.....  ++.++.. .|++|+++.+|  ||...
T Consensus       866 ~plr~~sPeEVA~avl--fLaSd~a~s~iTGq~I~VDVDGG~~~  907 (1878)
T 2uv9_A          866 LGVRTFSQQEMAFNLL--GLMAPAIVNLCQSDPVFADLNGGLQF  907 (1878)
T ss_dssp             TTCCCBCHHHHHHHHH--HHHSHHHHHHHTTSCEEEEESCSGGG
T ss_pred             cCCCCCCHHHHHHHHH--HHhCCcccccccCcEEEEEcCCCccc
Confidence                001111111111  5555555 78999999875  88653

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.87  E-value=5.9e-22  Score=183.69  Aligned_cols=168  Identities=22%  Similarity=0.213  Sum_probs=138.0

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHH-HCCC-eEEEEEcCCCc--hhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCC---
Q 025755            5 DKERVCVTGAGGYIASWLVKYLL-LKGY-MVHGTVRDPCD--EKNAHLKKLEGASENLQLFKTDLLDYEALCAATAG---   77 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~-~~g~-~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~---   77 (248)
                      .+|+++||||+||||+++++.|+ ++|+ +|++++|+...  ......+++.....++.++.||++|.++++++++.   
T Consensus       529 ~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~~~~  608 (795)
T 3slk_A          529 AAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACDVADRETLAKVLASIPD  608 (795)
T ss_dssp             TTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCT
T ss_pred             cccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Confidence            47899999999999999999999 7898 58899998432  22344445555567899999999999999998863   


Q ss_pred             ---CCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCC
Q 025755           78 ---CTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWS  150 (248)
Q Consensus        78 ---id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~  150 (248)
                         +|+||||||+......    .+.|...+++|+.|+.++.+++.+. . +||++||..+..+.+++..          
T Consensus       609 ~~~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~~-l-~iV~~SS~ag~~g~~g~~~----------  676 (795)
T 3slk_A          609 EHPLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELIDPD-V-ALVLFSSVSGVLGSGGQGN----------  676 (795)
T ss_dssp             TSCEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCTT-S-EEEEEEETHHHHTCSSCHH----------
T ss_pred             hCCCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHhhC-C-EEEEEccHHhcCCCCCCHH----------
Confidence               6999999998754321    2446778999999999999998543 3 9999999998888765443          


Q ss_pred             chhhhccccchHHHHHHHHHHHHHHHHHhCCccEEEEccCeeecCC
Q 025755          151 DEEFCKATENYYCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPM  196 (248)
Q Consensus       151 ~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~  196 (248)
                                 |+.+|.+.+.+++++..++ +++++|.||.+.+++
T Consensus       677 -----------YaAaka~~~alA~~~~~~G-i~v~sI~pG~v~t~g  710 (795)
T 3slk_A          677 -----------YAAANSFLDALAQQRQSRG-LPTRSLAWGPWAEHG  710 (795)
T ss_dssp             -----------HHHHHHHHHHHHHHHHHTT-CCEEEEEECCCSCCC
T ss_pred             -----------HHHHHHHHHHHHHHHHHcC-CeEEEEECCeECcch
Confidence                       9999999999999998765 999999999998764

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.85  E-value=5.2e-21  Score=159.40  Aligned_cols=156  Identities=17%  Similarity=0.132  Sum_probs=115.4

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCch---hhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEE
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDE---KNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVF   82 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~---~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi   82 (248)
                      +|+|+||||||+||+++++.|+++|++|++++|+....   ....+..+.  ..++.++.+|+.|.+++.++++++|+||
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~l~~~~~~~d~vi   81 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFK--QLGAKLIEASLDDHQRLVDALKQVDVVI   81 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHH--TTTCEEECCCSSCHHHHHHHHTTCSEEE
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHH--hCCeEEEeCCCCCHHHHHHHHhCCCEEE
Confidence            57899999999999999999999999999999986421   111122221  3468899999999999999999999999


Q ss_pred             EccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcC-CCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccccch
Q 025755           83 HVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAK-VKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENY  161 (248)
Q Consensus        83 ~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~-~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~  161 (248)
                      |+++....           ..|+.++.+++++|++.+ +++||+ |+.    +...   ..+   +.+..+     ....
T Consensus        82 ~~a~~~~~-----------~~~~~~~~~l~~aa~~~g~v~~~v~-S~~----g~~~---~~~---~~~~~p-----~~~~  134 (313)
T 1qyd_A           82 SALAGGVL-----------SHHILEQLKLVEAIKEAGNIKRFLP-SEF----GMDP---DIM---EHALQP-----GSIT  134 (313)
T ss_dssp             ECCCCSSS-----------STTTTTHHHHHHHHHHSCCCSEEEC-SCC----SSCT---TSC---CCCCSS-----TTHH
T ss_pred             ECCccccc-----------hhhHHHHHHHHHHHHhcCCCceEEe-cCC----cCCc---ccc---ccCCCC-----Ccch
Confidence            99987543           136778899999999998 999985 332    2110   000   111111     0234


Q ss_pred             HHHHHHHHHHHHHHHHHhCCccEEEEccCeeecC
Q 025755          162 YCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGP  195 (248)
Q Consensus       162 Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~  195 (248)
                      | .+|..+|.+++    +.+++++++||+.++++
T Consensus       135 y-~sK~~~e~~~~----~~g~~~~ilrp~~~~~~  163 (313)
T 1qyd_A          135 F-IDKRKVRRAIE----AASIPYTYVSSNMFAGY  163 (313)
T ss_dssp             H-HHHHHHHHHHH----HTTCCBCEEECCEEHHH
T ss_pred             H-HHHHHHHHHHH----hcCCCeEEEEeceeccc
Confidence            8 99998887775    34699999999999874

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.84  E-value=4.2e-21  Score=160.52  Aligned_cols=150  Identities=19%  Similarity=0.129  Sum_probs=111.3

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEEcc
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFHVA   85 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~~a   85 (248)
                      +|+|+||||||+||+++++.|+++|++|++++|+... ....++.+.  ..++.++++|+.|.+++.++++++|+|||++
T Consensus        11 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~-~~~~~~~l~--~~~v~~v~~Dl~d~~~l~~a~~~~d~vi~~a   87 (318)
T 2r6j_A           11 KSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSS-KTTLLDEFQ--SLGAIIVKGELDEHEKLVELMKKVDVVISAL   87 (318)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCS-CHHHHHHHH--HTTCEEEECCTTCHHHHHHHHTTCSEEEECC
T ss_pred             CCeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCc-hhhHHHHhh--cCCCEEEEecCCCHHHHHHHHcCCCEEEECC
Confidence            4689999999999999999999999999999998742 112222121  2468899999999999999999999999999


Q ss_pred             ccCCCCCCCCccccchhhhHHHHHHHHHHHHhcC-CCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccccchHHH
Q 025755           86 CPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAK-VKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCL  164 (248)
Q Consensus        86 g~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~-~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~  164 (248)
                      +...               +.++.++++++++.+ +++||+ |+    ++..       .+|..+..+.     ...| .
T Consensus        88 ~~~~---------------~~~~~~l~~aa~~~g~v~~~v~-S~----~g~~-------~~~~~~~~p~-----~~~y-~  134 (318)
T 2r6j_A           88 AFPQ---------------ILDQFKILEAIKVAGNIKRFLP-SD----FGVE-------EDRINALPPF-----EALI-E  134 (318)
T ss_dssp             CGGG---------------STTHHHHHHHHHHHCCCCEEEC-SC----CSSC-------TTTCCCCHHH-----HHHH-H
T ss_pred             chhh---------------hHHHHHHHHHHHhcCCCCEEEe-ec----cccC-------cccccCCCCc-----chhH-H
Confidence            8632               345789999999988 899984 33    1210       1222222221     2348 9


Q ss_pred             HHHHHHHHHHHHHHhCCccEEEEccCeeecC
Q 025755          165 AKTIAEIQALEYAKRGELDIVTVCPSIVIGP  195 (248)
Q Consensus       165 sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~  195 (248)
                      +|...|.++++    .+++++++||+.+++.
T Consensus       135 sK~~~e~~~~~----~~~~~~~lr~~~~~~~  161 (318)
T 2r6j_A          135 RKRMIRRAIEE----ANIPYTYVSANCFASY  161 (318)
T ss_dssp             HHHHHHHHHHH----TTCCBEEEECCEEHHH
T ss_pred             HHHHHHHHHHh----cCCCeEEEEcceehhh
Confidence            99988877653    4699999999988763

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.83  E-value=1e-19  Score=151.21  Aligned_cols=153  Identities=16%  Similarity=0.145  Sum_probs=112.5

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCC-c----hhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCC
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPC-D----EKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCT   79 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~-~----~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id   79 (248)
                      +||+|+||||||+||+++++.|+++|++|++++|+.. .    .....++.+.  ..++.++++|+.|.+++.++++++|
T Consensus         1 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~--~~~v~~v~~D~~d~~~l~~~~~~~d   78 (307)
T 2gas_A            1 TENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQ--SLGVILLEGDINDHETLVKAIKQVD   78 (307)
T ss_dssp             CCCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHH--HTTCEEEECCTTCHHHHHHHHTTCS
T ss_pred             CCcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHH--hCCCEEEEeCCCCHHHHHHHHhCCC
Confidence            3678999999999999999999999999999999861 1    1111122221  2468899999999999999999999


Q ss_pred             EEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcC-CCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccc
Q 025755           80 GVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAK-VKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKAT  158 (248)
Q Consensus        80 ~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~-~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~  158 (248)
                      +|||+|+...               +.++.++++++++.+ +++||+ |+ .   +..       .++..+..+.     
T Consensus        79 ~vi~~a~~~~---------------~~~~~~l~~aa~~~g~v~~~v~-S~-~---g~~-------~~~~~~~~p~-----  126 (307)
T 2gas_A           79 IVICAAGRLL---------------IEDQVKIIKAIKEAGNVKKFFP-SE-F---GLD-------VDRHDAVEPV-----  126 (307)
T ss_dssp             EEEECSSSSC---------------GGGHHHHHHHHHHHCCCSEEEC-SC-C---SSC-------TTSCCCCTTH-----
T ss_pred             EEEECCcccc---------------cccHHHHHHHHHhcCCceEEee-cc-c---ccC-------cccccCCCcc-----
Confidence            9999998632               345788999999988 899983 32 2   210       0111221110     


Q ss_pred             cchHHHHHHHHHHHHHHHHHhCCccEEEEccCeeecCC
Q 025755          159 ENYYCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPM  196 (248)
Q Consensus       159 ~~~Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~  196 (248)
                      ...| .+|...|.+++.    .+++++++|||.++++.
T Consensus       127 ~~~y-~sK~~~e~~~~~----~~i~~~~lrp~~~~~~~  159 (307)
T 2gas_A          127 RQVF-EEKASIRRVIEA----EGVPYTYLCCHAFTGYF  159 (307)
T ss_dssp             HHHH-HHHHHHHHHHHH----HTCCBEEEECCEETTTT
T ss_pred             hhHH-HHHHHHHHHHHH----cCCCeEEEEcceeeccc
Confidence            2348 999988877753    35999999999998854

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.82  E-value=1.2e-19  Score=150.84  Aligned_cols=151  Identities=18%  Similarity=0.203  Sum_probs=112.0

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCch----hhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEE
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDE----KNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGV   81 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~----~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~v   81 (248)
                      +|+|+||||||+||+++++.|+++|++|++++|+....    ....+..+.  ..++.++++|++|.+++.++++++|+|
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~--~~~v~~v~~D~~d~~~l~~~~~~~d~v   81 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFK--ASGANIVHGSIDDHASLVEAVKNVDVV   81 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHH--TTTCEEECCCTTCHHHHHHHHHTCSEE
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHH--hCCCEEEEeccCCHHHHHHHHcCCCEE
Confidence            67899999999999999999999999999999986421    111122221  346899999999999999999999999


Q ss_pred             EEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcC-CCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccccc
Q 025755           82 FHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAK-VKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATEN  160 (248)
Q Consensus        82 i~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~-~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~  160 (248)
                      ||+++...               +.++.+++++|++.+ +++||+ |+.    +..       .+|..+..+.     ..
T Consensus        82 i~~a~~~~---------------~~~~~~l~~aa~~~g~v~~~v~-S~~----g~~-------~~~~~~~~p~-----~~  129 (308)
T 1qyc_A           82 ISTVGSLQ---------------IESQVNIIKAIKEVGTVKRFFP-SEF----GND-------VDNVHAVEPA-----KS  129 (308)
T ss_dssp             EECCCGGG---------------SGGGHHHHHHHHHHCCCSEEEC-SCC----SSC-------TTSCCCCTTH-----HH
T ss_pred             EECCcchh---------------hhhHHHHHHHHHhcCCCceEee-ccc----ccC-------ccccccCCcc-----hh
Confidence            99998632               345688999999998 899984 432    110       1122221111     23


Q ss_pred             hHHHHHHHHHHHHHHHHHhCCccEEEEccCeeecC
Q 025755          161 YYCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGP  195 (248)
Q Consensus       161 ~Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~  195 (248)
                      .| .+|...|.+++.    .+++++++||+.++++
T Consensus       130 ~y-~sK~~~e~~~~~----~~~~~~~~r~~~~~~~  159 (308)
T 1qyc_A          130 VF-EVKAKVRRAIEA----EGIPYTYVSSNCFAGY  159 (308)
T ss_dssp             HH-HHHHHHHHHHHH----HTCCBEEEECCEEHHH
T ss_pred             HH-HHHHHHHHHHHh----cCCCeEEEEeceeccc
Confidence            48 999988877754    3599999999999875

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.82  E-value=1.3e-19  Score=151.60  Aligned_cols=152  Identities=15%  Similarity=0.067  Sum_probs=112.0

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCC-Cc---hhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCE
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDP-CD---EKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTG   80 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~-~~---~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~   80 (248)
                      +||+|+||||+|+||+++++.|+++|++|++++|+. ..   .....+..+.  ..++.++.+|++|.+++.++++++|+
T Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~--~~~v~~v~~D~~d~~~l~~a~~~~d~   80 (321)
T 3c1o_A            3 HMEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFR--SMGVTIIEGEMEEHEKMVSVLKQVDI   80 (321)
T ss_dssp             -CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHH--HTTCEEEECCTTCHHHHHHHHTTCSE
T ss_pred             cccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhh--cCCcEEEEecCCCHHHHHHHHcCCCE
Confidence            357899999999999999999999999999999986 21   1111122111  24689999999999999999999999


Q ss_pred             EEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcC-CCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhcccc
Q 025755           81 VFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAK-VKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATE  159 (248)
Q Consensus        81 vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~-~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~  159 (248)
                      |||+|+...               +.++.+++++|++.+ +++||+ |+ .   +..       .+|..+..+.     .
T Consensus        81 vi~~a~~~~---------------~~~~~~l~~aa~~~g~v~~~v~-S~-~---g~~-------~~~~~~~~p~-----~  128 (321)
T 3c1o_A           81 VISALPFPM---------------ISSQIHIINAIKAAGNIKRFLP-SD-F---GCE-------EDRIKPLPPF-----E  128 (321)
T ss_dssp             EEECCCGGG---------------SGGGHHHHHHHHHHCCCCEEEC-SC-C---SSC-------GGGCCCCHHH-----H
T ss_pred             EEECCCccc---------------hhhHHHHHHHHHHhCCccEEec-cc-c---ccC-------ccccccCCCc-----c
Confidence            999998642               445789999999998 899983 32 2   210       0122222220     2


Q ss_pred             chHHHHHHHHHHHHHHHHHhCCccEEEEccCeeecC
Q 025755          160 NYYCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGP  195 (248)
Q Consensus       160 ~~Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~  195 (248)
                      ..| .+|..+|.+++.    .+++++++||+.++++
T Consensus       129 ~~y-~sK~~~e~~~~~----~~~~~~~lrp~~~~~~  159 (321)
T 3c1o_A          129 SVL-EKKRIIRRAIEA----AALPYTYVSANCFGAY  159 (321)
T ss_dssp             HHH-HHHHHHHHHHHH----HTCCBEEEECCEEHHH
T ss_pred             hHH-HHHHHHHHHHHH----cCCCeEEEEeceeccc
Confidence            349 999998887753    3599999999998874

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=99.79  E-value=5.2e-20  Score=154.67  Aligned_cols=175  Identities=14%  Similarity=0.063  Sum_probs=124.8

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCC-------eEEEEEcCCCch-hhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCC
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGY-------MVHGTVRDPCDE-KNAHLKKLEGASENLQLFKTDLLDYEALCAATAG   77 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~-------~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~   77 (248)
                      .++|+||||+||||++++..|+++|+       +|+++++..... .......+...  .+.++ .|+.+.+++.+++++
T Consensus         4 ~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~--~~~~~-~di~~~~~~~~a~~~   80 (327)
T 1y7t_A            4 PVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDC--AFPLL-AGLEATDDPKVAFKD   80 (327)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTT--TCTTE-EEEEEESCHHHHTTT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhcc--ccccc-CCeEeccChHHHhCC
Confidence            46899999999999999999999886       899988754111 11111112111  11223 577776677888899


Q ss_pred             CCEEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcC-CC-EEEEEeccceeccCCCCCCCCccC-CCCCCchhh
Q 025755           78 CTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAK-VK-RVVVVSSIGAVMLNPNWPKGQVMD-EECWSDEEF  154 (248)
Q Consensus        78 id~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~-~~-~iV~vSS~~~~~~~~~~~~~~~~~-e~~~~~~~~  154 (248)
                      +|+|||+||.....  .....++++.|+.++.++++++.+.+ .+ +++++|+......        ++. +..+     
T Consensus        81 ~D~Vih~Ag~~~~~--~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~~~~~--------~~~~~~~~-----  145 (327)
T 1y7t_A           81 ADYALLVGAAPRKA--GMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPANTNA--------LIAYKNAP-----  145 (327)
T ss_dssp             CSEEEECCCCCCCT--TCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHH--------HHHHHTCT-----
T ss_pred             CCEEEECCCcCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCchhhhH--------HHHHHHcC-----
Confidence            99999999976532  23446789999999999999999985 54 8888887542111        111 1110     


Q ss_pred             hccccchHHHHHHHHHHHHHHHHHhCCccEEEEccCeeecCCCC
Q 025755          155 CKATENYYCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQ  198 (248)
Q Consensus       155 ~~~~~~~Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~  198 (248)
                      ...|.+.|+.+|..+|++...+++.+++++.++||+++|||+..
T Consensus       146 ~~~p~~~yg~tkl~~er~~~~~a~~~g~~~~~vr~~~V~G~h~~  189 (327)
T 1y7t_A          146 GLNPRNFTAMTRLDHNRAKAQLAKKTGTGVDRIRRMTVWGNHSS  189 (327)
T ss_dssp             TSCGGGEEECCHHHHHHHHHHHHHHHTCCGGGEECCEEEBCSST
T ss_pred             CCChhheeccchHHHHHHHHHHHHHhCcChhheeeeEEEcCCCC
Confidence            01123459999999999999999888899999999999999764

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=99.78  E-value=4.1e-18  Score=173.16  Aligned_cols=210  Identities=13%  Similarity=0.048  Sum_probs=135.4

Q ss_pred             CCCcEEEEEcCccH-HHHHHHHHHHHCCCeEEEEEcCCCch----hhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC--
Q 025755            4 EDKERVCVTGAGGY-IASWLVKYLLLKGYMVHGTVRDPCDE----KNAHLKKLEGASENLQLFKTDLLDYEALCAATA--   76 (248)
Q Consensus         4 l~~k~vlVtG~~g~-iG~~~~~~l~~~g~~V~~~~r~~~~~----~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~--   76 (248)
                      +++|+++||||++| ||+++++.|+++|++|++++|+....    .....+.+.....++..+.+|++|.++++++++  
T Consensus      2134 l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv~~i 2213 (3089)
T 3zen_D         2134 XXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLVEWV 2213 (3089)
T ss_dssp             CCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHHH
Confidence            78999999999999 99999999999999999999987542    122333344445568889999999999888742  


Q ss_pred             ---------CCCEEEEcccc----CCCC----C-CCCccccc----hhhhHHHHHHHHHHHHhc----CCC---EEEE-E
Q 025755           77 ---------GCTGVFHVACP----VPVG----K-VPNPEVQL----IDPAVVGTKNVLNSCVKA----KVK---RVVV-V  126 (248)
Q Consensus        77 ---------~id~vi~~ag~----~~~~----~-~~~~~~~~----~~~n~~g~~~~~~~~~~~----~~~---~iV~-v  126 (248)
                               ++|++|||||.    .+..    . ..+.|...    +++|+.++..+++++.+.    +.+   .+|. .
T Consensus      2214 ~~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g~~~~ii~~~ 2293 (3089)
T 3zen_D         2214 GTEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERDIASRLHVVLPG 2293 (3089)
T ss_dssp             TSCCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCCEEEEEEE
T ss_pred             HhhhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceeEEEEEC
Confidence                     48999999997    2211    1 12333334    788999988877776542    321   2222 2


Q ss_pred             eccceeccCCCCCCCCccCCCCCCchhhhccccchHHHHHHHHHHHHHHHHHh--C--CccEEEEccCeee-cCCCCCCC
Q 025755          127 SSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKR--G--ELDIVTVCPSIVI-GPMLQPTI  201 (248)
Q Consensus       127 SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~--~--~i~v~~vrpg~i~-g~~~~~~~  201 (248)
                      |+..+.  .+...                     .|+.||+....+.+.++.+  .  +|+||+++||++. +++.... 
T Consensus      2294 ss~~g~--~g~~~---------------------aYsASKaAl~~LtrslA~E~~~a~~IrVn~v~PG~v~tT~l~~~~- 2349 (3089)
T 3zen_D         2294 SPNRGM--FGGDG---------------------AYGEAKSALDALENRWSAEKSWAERVSLAHALIGWTKGTGLMGQN- 2349 (3089)
T ss_dssp             CSSTTS--CSSCS---------------------SHHHHGGGHHHHHHHHHHCSTTTTTEEEEEEECCCEECSTTTTTT-
T ss_pred             Cccccc--CCCch---------------------HHHHHHHHHHHHHHHHHhccccCCCeEEEEEeecccCCCcccccc-
Confidence            222111  11111                     2999997555555555544  1  4999999999998 4433221 


Q ss_pred             CccHHHHHHHHcC-----------CCCCCCCCc-hhhhhhhhhc--ccee
Q 025755          202 NTSSLLLLGFLKG-----------FFFTTPSHS-YMLERTLVLN--QGVR  237 (248)
Q Consensus       202 ~~~~~~~~~~~~~-----------~~l~~~~~~-~~~g~~l~vd--~g~~  237 (248)
                      ........+...+           .||.++... +.+++.+.+|  ||..
T Consensus      2350 ~~~~~~~~~~~~r~~~PeEIA~avlfLaS~~a~~~~~~~p~~vdl~GG~~ 2399 (3089)
T 3zen_D         2350 DAIVSAVEEAGVTTYTTDEMAAMLLDLCTVETKVAAAGAPVKVDLTGGLG 2399 (3089)
T ss_dssp             TTTHHHHGGGSCBCEEHHHHHHHHHHTTSHHHHHHHHHSCEEEECSBSCS
T ss_pred             hhHHHHHHhcCCCCCCHHHHHHHHHHHhChhhhhHhcCCeEEEEcCCCcC
Confidence            1111211111111           177777754 5577778877  8864

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.72  E-value=3.1e-17  Score=166.68  Aligned_cols=168  Identities=17%  Similarity=0.157  Sum_probs=125.9

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCe-EEEEEcCCCchh--hHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-----
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYM-VHGTVRDPCDEK--NAHLKKLEGASENLQLFKTDLLDYEALCAATA-----   76 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~-V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-----   76 (248)
                      .+|+++||||+||||+++++.|+++|++ |++++|+..+..  ....+.+.....++.++.+|++|.++++++++     
T Consensus      1883 ~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~ 1962 (2512)
T 2vz8_A         1883 PHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQGVQVLVSTSNASSLDGARSLITEATQL 1962 (2512)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHTTCEEEEECCCSSSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhCCCEEEEEecCCCCHHHHHHHHHHHHhc
Confidence            4789999999999999999999999997 778888764322  22233333335678899999999999888764     


Q ss_pred             -CCCEEEEccccCCCCC----CCCccccchhhhHHHHHHHHHHHHhc--CCCEEEEEeccceeccCCCCCCCCccCCCCC
Q 025755           77 -GCTGVFHVACPVPVGK----VPNPEVQLIDPAVVGTKNVLNSCVKA--KVKRVVVVSSIGAVMLNPNWPKGQVMDEECW  149 (248)
Q Consensus        77 -~id~vi~~ag~~~~~~----~~~~~~~~~~~n~~g~~~~~~~~~~~--~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~  149 (248)
                       .+|+||||||+.....    ..+.|...+++|+.|+.++.+++.+.  ..++||++||..+..+.++..          
T Consensus      1963 g~id~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~g~iV~iSS~ag~~g~~g~~---------- 2032 (2512)
T 2vz8_A         1963 GPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPELDYFVIFSSVSCGRGNAGQA---------- 2032 (2512)
T ss_dssp             SCEEEEEECCCC----------------CTTTTHHHHHHHHHHHHHHCTTCCEEEEECCHHHHTTCTTCH----------
T ss_pred             CCCcEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCEEEEecchhhcCCCCCcH----------
Confidence             5899999999764321    24567889999999999998887664  457999999988877765433          


Q ss_pred             CchhhhccccchHHHHHHHHHHHHHHHHHhCCccEEEEccCeeec
Q 025755          150 SDEEFCKATENYYCLAKTIAEIQALEYAKRGELDIVTVCPSIVIG  194 (248)
Q Consensus       150 ~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g  194 (248)
                                 .|+.+|++.+.+++....++ ++..++..|.+-+
T Consensus      2033 -----------~Y~aaKaal~~l~~~rr~~G-l~~~a~~~g~~~~ 2065 (2512)
T 2vz8_A         2033 -----------NYGFANSAMERICEKRRHDG-LPGLAVQWGAIGD 2065 (2512)
T ss_dssp             -----------HHHHHHHHHHHHHHHHHHTT-SCCCEEEECCBCT
T ss_pred             -----------HHHHHHHHHHHHHHHHHHCC-CcEEEEEccCcCC
Confidence                       39999999999999877764 9888888876643

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=99.55  E-value=4.7e-14  Score=118.66  Aligned_cols=177  Identities=11%  Similarity=-0.032  Sum_probs=116.3

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHH-HCCCeEEEEEcCCCchhh-----------HHhhhhcCCCCCeEEEEccCCCHHHH
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLL-LKGYMVHGTVRDPCDEKN-----------AHLKKLEGASENLQLFKTDLLDYEAL   71 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~-~~g~~V~~~~r~~~~~~~-----------~~~~~~~~~~~~~~~~~~Di~d~~~~   71 (248)
                      +.+|++|||||++|||.+.+..|+ +.|..|+++.+.......           ...+.....+.+...+.||++|.+.+
T Consensus        48 ~~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e~i  127 (401)
T 4ggo_A           48 KAPKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDEIK  127 (401)
T ss_dssp             CCCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHH
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHHHH
Confidence            457999999999999999999998 679999999886642211           11223334467889999999999988


Q ss_pred             HHHhC-------CCCEEEEccccCCCCCCC---------Ccc------------cc---------chhhhHHHHHH----
Q 025755           72 CAATA-------GCTGVFHVACPVPVGKVP---------NPE------------VQ---------LIDPAVVGTKN----  110 (248)
Q Consensus        72 ~~~~~-------~id~vi~~ag~~~~~~~~---------~~~------------~~---------~~~~n~~g~~~----  110 (248)
                      +++++       ++|+|||++|.....+..         ++.            .+         .-+..+.++..    
T Consensus       128 ~~vi~~i~~~~G~IDiLVhS~A~~~r~~p~~g~~~~S~LKpi~~~~~~~~ldt~~~~i~~~~l~pat~eeie~T~~vMg~  207 (401)
T 4ggo_A          128 AQVIEEAKKKGIKFDLIVYSLASPVRTDPDTGIMHKSVLKPFGKTFTGKTVDPFTGELKEISAEPANDEEAAATVKVMGG  207 (401)
T ss_dssp             HHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEECTTTCCEEEEEECCCCHHHHHHHHHHHSS
T ss_pred             HHHHHHHHHhcCCCCEEEEecccccccCCCCCceeeeeecccccccccccccccccccccccccCCcHHHHHHHHHHHhh
Confidence            88875       589999999865321100         000            00         01122233322    


Q ss_pred             -----HHHHHHhc----CCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccccchHHHHHHHHHHHHHHHHHhC-
Q 025755          111 -----VLNSCVKA----KVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKRG-  180 (248)
Q Consensus       111 -----~~~~~~~~----~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~-  180 (248)
                           .+.+....    ...++|.+|+.+.-.-.|.+-                   ...+|.+|+.-|..++.++.+. 
T Consensus       208 s~~s~w~~al~~a~lla~G~siva~SYiGse~t~P~Y~-------------------~G~mG~AKaaLEa~~r~La~eL~  268 (401)
T 4ggo_A          208 EDWERWIKQLSKEGLLEEGCITLAYSYIGPEATQALYR-------------------KGTIGKAKEHLEATAHRLNKENP  268 (401)
T ss_dssp             HHHHHHHHHHHHTTCEEEEEEEEEEECCCCGGGHHHHT-------------------TSHHHHHHHHHHHHHHHHHHHCT
T ss_pred             hHHHHHHHHHHhhhcccCCceEEEEeccCcceeecCCC-------------------ccHHHHHHHHHHHHHHHHHHhcC
Confidence                 22333332    346899999865422221100                   1137999998888888888765 


Q ss_pred             CccEEEEccCeeecCCCCC
Q 025755          181 ELDIVTVCPSIVIGPMLQP  199 (248)
Q Consensus       181 ~i~v~~vrpg~i~g~~~~~  199 (248)
                      +++++++.++.+-++-...
T Consensus       269 ~~~a~v~v~~a~vT~Assa  287 (401)
T 4ggo_A          269 SIRAFVSVNKGLVTRASAV  287 (401)
T ss_dssp             TEEEEEEECCCCCCTTGGG
T ss_pred             CCcEEEEEcCccccchhhc
Confidence            6899999999998865443

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=99.35  E-value=7.8e-12  Score=88.60  Aligned_cols=98  Identities=21%  Similarity=0.187  Sum_probs=76.5

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCC-CeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEE
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKG-YMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVF   82 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi   82 (248)
                      .++++|+|+|+ |++|+++++.|++.| ++|++++|+....  ....     ...+.++.+|+.+.+++.++++++|+||
T Consensus         3 ~~~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~--~~~~-----~~~~~~~~~d~~~~~~~~~~~~~~d~vi   74 (118)
T 3ic5_A            3 AMRWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAAL--AVLN-----RMGVATKQVDAKDEAGLAKALGGFDAVI   74 (118)
T ss_dssp             TTCEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHH--HHHH-----TTTCEEEECCTTCHHHHHHHTTTCSEEE
T ss_pred             CCcCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHH--HHHH-----hCCCcEEEecCCCHHHHHHHHcCCCEEE
Confidence            45689999999 999999999999999 9999999976321  1111     2457788999999999999999999999


Q ss_pred             EccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEec
Q 025755           83 HVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSS  128 (248)
Q Consensus        83 ~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS  128 (248)
                      |+++..                  ....+++++.+.+...+ .+|+
T Consensus        75 ~~~~~~------------------~~~~~~~~~~~~g~~~~-~~~~  101 (118)
T 3ic5_A           75 SAAPFF------------------LTPIIAKAAKAAGAHYF-DLTE  101 (118)
T ss_dssp             ECSCGG------------------GHHHHHHHHHHTTCEEE-CCCS
T ss_pred             ECCCch------------------hhHHHHHHHHHhCCCEE-EecC
Confidence            999521                  13578888888886444 4443

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=99.27  E-value=7.1e-12  Score=103.12  Aligned_cols=83  Identities=14%  Similarity=0.053  Sum_probs=66.5

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEE
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFH   83 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~   83 (248)
                      +++|+++||||+||+|+++++.|+++|++|++++|+.+. .....+.+... .++.++.+|++|.++++++++++|+|||
T Consensus       117 l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~-~~~l~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~DvlVn  194 (287)
T 1lu9_A          117 VKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDK-AQAAADSVNKR-FKVNVTAAETADDASRAEAVKGAHFVFT  194 (287)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHH-HHHHHHHHHHH-HTCCCEEEECCSHHHHHHHTTTCSEEEE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHH-HHHHHHHHHhc-CCcEEEEecCCCHHHHHHHHHhCCEEEE
Confidence            678999999999999999999999999999999997632 22222222111 2456788999999999999999999999


Q ss_pred             ccccC
Q 025755           84 VACPV   88 (248)
Q Consensus        84 ~ag~~   88 (248)
                      |||..
T Consensus       195 ~ag~g  199 (287)
T 1lu9_A          195 AGAIG  199 (287)
T ss_dssp             CCCTT
T ss_pred             CCCcc
Confidence            99753

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=99.24  E-value=1.6e-11  Score=102.86  Aligned_cols=176  Identities=11%  Similarity=0.000  Sum_probs=112.6

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCC-------eEEEEEcCC---CchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHH
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGY-------MVHGTVRDP---CDEKNAHLKKLEGASENLQLFKTDLLDYEALCAA   74 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~-------~V~~~~r~~---~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~   74 (248)
                      +.++|+||||+|+||++++..|+..|.       +|++++++.   .+........+......+   ..|+....++..+
T Consensus         4 ~~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~---~~~i~~~~~~~~a   80 (329)
T 1b8p_A            4 TPMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPL---LAGMTAHADPMTA   80 (329)
T ss_dssp             CCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTT---EEEEEEESSHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcccc---cCcEEEecCcHHH
Confidence            457999999999999999999999885       788888761   111111111122111011   1355555667888


Q ss_pred             hCCCCEEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcC-CC-EEEEEeccceeccCCCCCCCCccCCCCCCch
Q 025755           75 TAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAK-VK-RVVVVSSIGAVMLNPNWPKGQVMDEECWSDE  152 (248)
Q Consensus        75 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~-~~-~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~  152 (248)
                      ++++|+|||+||.....  .....++++.|+.++.++++.+.+.. .. +||++|.........-    ....+.-|   
T Consensus        81 l~~aD~Vi~~ag~~~~~--g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SNPv~~~t~~~----~~~~~~~p---  151 (329)
T 1b8p_A           81 FKDADVALLVGARPRGP--GMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGNPANTNAYIA----MKSAPSLP---  151 (329)
T ss_dssp             TTTCSEEEECCCCCCCT--TCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHH----HHTCTTSC---
T ss_pred             hCCCCEEEEeCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccCchHHHHHHH----HHHcCCCC---
Confidence            99999999999975432  22335688999999999999999984 54 8999987442111000    00000000   


Q ss_pred             hhhccccchHHHHHHHHHHHHHHHHHhCCccEEEEccCeeecCCC
Q 025755          153 EFCKATENYYCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPML  197 (248)
Q Consensus       153 ~~~~~~~~~Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~  197 (248)
                           +...|+.++.-..++...+++..+++...|+..+++|.+.
T Consensus       152 -----~~~v~g~t~Ld~~r~~~~la~~lgv~~~~v~~~~v~G~Hg  191 (329)
T 1b8p_A          152 -----AKNFTAMLRLDHNRALSQIAAKTGKPVSSIEKLFVWGNHS  191 (329)
T ss_dssp             -----GGGEEECCHHHHHHHHHHHHHHHTCCGGGEESCEEEBCSS
T ss_pred             -----HHHEEEeecHHHHHHHHHHHHHhCcCHHHceEEEEEeccC
Confidence                 0122777777677777778777677766777666778653

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=99.16  E-value=3.2e-10  Score=94.77  Aligned_cols=117  Identities=15%  Similarity=0.056  Sum_probs=83.2

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCC--CeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEE
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKG--YMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVF   82 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi   82 (248)
                      ++++|+||||+|++|..++..|+.+|  .+|++++++...   .....+........+ .. +.+..++..+++++|+||
T Consensus         7 ~~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~~---~~~~dL~~~~~~~~v-~~-~~~t~d~~~al~gaDvVi   81 (326)
T 1smk_A            7 PGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAP---GVTADISHMDTGAVV-RG-FLGQQQLEAALTGMDLII   81 (326)
T ss_dssp             -CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSHH---HHHHHHHTSCSSCEE-EE-EESHHHHHHHHTTCSEEE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCcH---hHHHHhhcccccceE-EE-EeCCCCHHHHcCCCCEEE
Confidence            45799999999999999999999998  789998877531   111112111111111 11 334567888899999999


Q ss_pred             EccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEec
Q 025755           83 HVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSS  128 (248)
Q Consensus        83 ~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS  128 (248)
                      |+||.....  .....+++..|+.+++++++.+.+.+...+|+++|
T Consensus        82 ~~ag~~~~~--g~~r~dl~~~N~~~~~~i~~~i~~~~p~~~viv~S  125 (326)
T 1smk_A           82 VPAGVPRKP--GMTRDDLFKINAGIVKTLCEGIAKCCPRAIVNLIS  125 (326)
T ss_dssp             ECCCCCCCS--SCCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEECC
T ss_pred             EcCCcCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEEC
Confidence            999964432  12235678999999999999999987766777765

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=99.06  E-value=1.4e-09  Score=79.42  Aligned_cols=105  Identities=12%  Similarity=0.035  Sum_probs=73.0

Q ss_pred             CCCCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHH-hCCCC
Q 025755            1 MSGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAA-TAGCT   79 (248)
Q Consensus         1 m~~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~-~~~id   79 (248)
                      |..+++++|+|+|+ |++|+.+++.|.+.|++|++++++...     .+.+..  .....+.+|..|.+.+.++ ++++|
T Consensus         1 m~~~~~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~-----~~~~~~--~~~~~~~~d~~~~~~l~~~~~~~~d   72 (144)
T 2hmt_A            1 MGRIKNKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEK-----VNAYAS--YATHAVIANATEENELLSLGIRNFE   72 (144)
T ss_dssp             -----CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHH-----HHTTTT--TCSEEEECCTTCHHHHHTTTGGGCS
T ss_pred             CCCCcCCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHH-----HHHHHH--hCCEEEEeCCCCHHHHHhcCCCCCC
Confidence            56678889999998 999999999999999999999987521     111211  2346678999998888776 67899


Q ss_pred             EEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEecc
Q 025755           80 GVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSI  129 (248)
Q Consensus        80 ~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~  129 (248)
                      +||++++..            .+.|.    .+.+.+++.+.+++|..++.
T Consensus        73 ~vi~~~~~~------------~~~~~----~~~~~~~~~~~~~ii~~~~~  106 (144)
T 2hmt_A           73 YVIVAIGAN------------IQAST----LTTLLLKELDIPNIWVKAQN  106 (144)
T ss_dssp             EEEECCCSC------------HHHHH----HHHHHHHHTTCSEEEEECCS
T ss_pred             EEEECCCCc------------hHHHH----HHHHHHHHcCCCeEEEEeCC
Confidence            999988631            12333    35666677777777776653

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=98.97  E-value=2.6e-09  Score=88.84  Aligned_cols=115  Identities=9%  Similarity=0.016  Sum_probs=77.6

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCCC--eEEEEEc--CCCchh--hHHhhhhcCCC-CCeEEEEccCCCHHHHHHHhCCCC
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKGY--MVHGTVR--DPCDEK--NAHLKKLEGAS-ENLQLFKTDLLDYEALCAATAGCT   79 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g~--~V~~~~r--~~~~~~--~~~~~~~~~~~-~~~~~~~~Di~d~~~~~~~~~~id   79 (248)
                      +||+||||+|++|+.++..|+..|.  ++.++++  +.....  ...+....... .++.+...+    +++.++++++|
T Consensus         1 mKI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~----d~l~~al~gaD   76 (313)
T 1hye_A            1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVES----DENLRIIDESD   76 (313)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEE----TTCGGGGTTCS
T ss_pred             CEEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCC----cchHHHhCCCC
Confidence            3899999999999999999998885  5777777  431111  11111111111 223333211    23556788999


Q ss_pred             EEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEec
Q 025755           80 GVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSS  128 (248)
Q Consensus        80 ~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS  128 (248)
                      +|||+||.....  .....++++.|+.+++++++++.+.+ .++|+++|
T Consensus        77 ~Vi~~Ag~~~~~--g~~r~dl~~~N~~i~~~i~~~i~~~~-~~~vlv~S  122 (313)
T 1hye_A           77 VVIITSGVPRKE--GMSRMDLAKTNAKIVGKYAKKIAEIC-DTKIFVIT  122 (313)
T ss_dssp             EEEECCSCCCCT--TCCHHHHHHHHHHHHHHHHHHHHHHC-CCEEEECS
T ss_pred             EEEECCCCCCCC--CCcHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEec
Confidence            999999975432  22335679999999999999999998 77777766

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.94  E-value=3.5e-09  Score=92.23  Aligned_cols=110  Identities=17%  Similarity=0.122  Sum_probs=76.5

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEEc
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFHV   84 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~~   84 (248)
                      ++|+|+|+| +|++|+++++.|++.|++|++++|+...     .+.+....+.+..+.+|+.|.+++.++++++|+||||
T Consensus         2 ~~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~-----a~~la~~~~~~~~~~~Dv~d~~~l~~~l~~~DvVIn~   75 (450)
T 1ff9_A            2 ATKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLES-----AKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISL   75 (450)
T ss_dssp             CCCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHH-----HHHTTTTCTTEEEEECCTTCHHHHHHHHTTSSEEEEC
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHH-----HHHHHHhcCCceEEEeecCCHHHHHHHHcCCcEEEEC
Confidence            578999998 7999999999999999999999987532     1222222234778899999999999999999999999


Q ss_pred             cccCCCCCCC----Cccccchhhh--HHHHHHHHHHHHhcCC
Q 025755           85 ACPVPVGKVP----NPEVQLIDPA--VVGTKNVLNSCVKAKV  120 (248)
Q Consensus        85 ag~~~~~~~~----~~~~~~~~~n--~~g~~~~~~~~~~~~~  120 (248)
                      ++........    ..-..++..+  .....++++++++.++
T Consensus        76 a~~~~~~~i~~a~l~~g~~vvd~~~~~~~~~~l~~aA~~aGv  117 (450)
T 1ff9_A           76 IPYTFHATVIKSAIRQKKHVVTTSYVSPAMMELDQAAKDAGI  117 (450)
T ss_dssp             CC--CHHHHHHHHHHHTCEEEESSCCCHHHHHTHHHHHHTTC
T ss_pred             CccccchHHHHHHHhCCCeEEEeecccHHHHHHHHHHHHCCC
Confidence            9864221000    0001111111  2356788999998875

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=98.91  E-value=4.5e-09  Score=82.65  Aligned_cols=75  Identities=11%  Similarity=-0.016  Sum_probs=57.2

Q ss_pred             CCCCcEEEEEcC----------------ccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCC
Q 025755            3 GEDKERVCVTGA----------------GGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLL   66 (248)
Q Consensus         3 ~l~~k~vlVtG~----------------~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~   66 (248)
                      +|++|+||||||                +|++|+++++.|+++|++|++++++.. ..      .   ...+  ..+|+.
T Consensus         5 ~l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~-l~------~---~~g~--~~~dv~   72 (226)
T 1u7z_A            5 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVS-LP------T---PPFV--KRVDVM   72 (226)
T ss_dssp             TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCC-CC------C---CTTE--EEEECC
T ss_pred             CCCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcc-cc------c---CCCC--eEEccC
Confidence            478999999999                699999999999999999999887642 11      0   1123  246888


Q ss_pred             CHHHHHHH----hCCCCEEEEccccCC
Q 025755           67 DYEALCAA----TAGCTGVFHVACPVP   89 (248)
Q Consensus        67 d~~~~~~~----~~~id~vi~~ag~~~   89 (248)
                      +.+++...    +.++|++|||||+..
T Consensus        73 ~~~~~~~~v~~~~~~~Dili~~Aav~d   99 (226)
T 1u7z_A           73 TALEMEAAVNASVQQQNIFIGCAAVAD   99 (226)
T ss_dssp             SHHHHHHHHHHHGGGCSEEEECCBCCS
T ss_pred             cHHHHHHHHHHhcCCCCEEEECCcccC
Confidence            86654443    457999999999764

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=98.88  E-value=1.6e-08  Score=83.58  Aligned_cols=113  Identities=16%  Similarity=0.061  Sum_probs=76.9

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCCC--eEEEEEc--CCCchh--hHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCE
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKGY--MVHGTVR--DPCDEK--NAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTG   80 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g~--~V~~~~r--~~~~~~--~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~   80 (248)
                      +||+||||+|++|+.++..|+..|.  ++.++++  +.....  ...+........++.+.. +  +    .++++++|+
T Consensus         1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~-~--~----~~a~~~aDv   73 (303)
T 1o6z_A            1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQ-G--G----YEDTAGSDV   73 (303)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEE-C--C----GGGGTTCSE
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEe-C--C----HHHhCCCCE
Confidence            4899999999999999999998875  6777777  432111  111111111123344443 2  2    345789999


Q ss_pred             EEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEec
Q 025755           81 VFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSS  128 (248)
Q Consensus        81 vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS  128 (248)
                      |||+||.....  ...-.++++.|+.+++++++++.+.+...+|+++|
T Consensus        74 Vi~~ag~~~~~--g~~r~dl~~~N~~i~~~i~~~i~~~~p~~~viv~S  119 (303)
T 1o6z_A           74 VVITAGIPRQP--GQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTS  119 (303)
T ss_dssp             EEECCCCCCCT--TCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECC
T ss_pred             EEEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEeC
Confidence            99999965432  12235678999999999999999997777777765

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=98.87  E-value=1.1e-08  Score=80.60  Aligned_cols=75  Identities=15%  Similarity=0.185  Sum_probs=54.7

Q ss_pred             CCcEEEEEcC----------------ccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCH
Q 025755            5 DKERVCVTGA----------------GGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDY   68 (248)
Q Consensus         5 ~~k~vlVtG~----------------~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~   68 (248)
                      +||+||||||                +|++|.++++.|+++|++|++++|......        .....+..+  |+.+.
T Consensus         2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~~--------~~~~~~~~~--~v~s~   71 (232)
T 2gk4_A            2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALKP--------EPHPNLSIR--EITNT   71 (232)
T ss_dssp             -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCCC--------CCCTTEEEE--ECCSH
T ss_pred             CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCccccc--------cCCCCeEEE--EHhHH
Confidence            5899999999                899999999999999999999998753110        001234444  55554


Q ss_pred             HH----HHHHhCCCCEEEEccccCC
Q 025755           69 EA----LCAATAGCTGVFHVACPVP   89 (248)
Q Consensus        69 ~~----~~~~~~~id~vi~~ag~~~   89 (248)
                      ++    +...+.++|++||+||+..
T Consensus        72 ~em~~~v~~~~~~~Dili~aAAvsD   96 (232)
T 2gk4_A           72 KDLLIEMQERVQDYQVLIHSMAVSD   96 (232)
T ss_dssp             HHHHHHHHHHGGGCSEEEECSBCCS
T ss_pred             HHHHHHHHHhcCCCCEEEEcCcccc
Confidence            43    4444567999999999764

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=98.87  E-value=5.3e-09  Score=89.98  Aligned_cols=80  Identities=15%  Similarity=0.156  Sum_probs=62.7

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCC---CeEEEEEcCCCchhhHHhhhhcC-CCCCeEEEEccCCCHHHHHHHhCC--CC
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKG---YMVHGTVRDPCDEKNAHLKKLEG-ASENLQLFKTDLLDYEALCAATAG--CT   79 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g---~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Di~d~~~~~~~~~~--id   79 (248)
                      |++|+|+|+ |+||+++++.|+++|   .+|++.+|+.++. ....+.+.. ...++..+.+|+.|.+++++++++  +|
T Consensus         1 M~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~-~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~~~D   78 (405)
T 4ina_A            1 MAKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKC-QEIAQSIKAKGYGEIDITTVDADSIEELVALINEVKPQ   78 (405)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHH-HHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHHCCS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHH-HHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhhCCC
Confidence            468999999 899999999999998   4899999987432 222222221 124688999999999999999987  89


Q ss_pred             EEEEcccc
Q 025755           80 GVFHVACP   87 (248)
Q Consensus        80 ~vi~~ag~   87 (248)
                      +||||+++
T Consensus        79 vVin~ag~   86 (405)
T 4ina_A           79 IVLNIALP   86 (405)
T ss_dssp             EEEECSCG
T ss_pred             EEEECCCc
Confidence            99999974

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=98.83  E-value=9e-09  Score=75.23  Aligned_cols=78  Identities=18%  Similarity=0.139  Sum_probs=58.1

Q ss_pred             CCCCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHH-hCCCC
Q 025755            1 MSGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAA-TAGCT   79 (248)
Q Consensus         1 m~~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~-~~~id   79 (248)
                      |..+++++++|+|+ |.+|+.+++.|.++|++|++++++.+..  ....   .  ..+.++.+|.+|++.++++ ++++|
T Consensus         1 m~~~~~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~--~~~~---~--~~~~~~~gd~~~~~~l~~~~~~~~d   72 (141)
T 3llv_A            1 MTENGRYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKI--ELLE---D--EGFDAVIADPTDESFYRSLDLEGVS   72 (141)
T ss_dssp             -----CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHH--HHHH---H--TTCEEEECCTTCHHHHHHSCCTTCS
T ss_pred             CCCCCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHH--HHHH---H--CCCcEEECCCCCHHHHHhCCcccCC
Confidence            44456789999998 8899999999999999999999876321  1111   1  2467889999999998876 45789


Q ss_pred             EEEEccc
Q 025755           80 GVFHVAC   86 (248)
Q Consensus        80 ~vi~~ag   86 (248)
                      +||.+.+
T Consensus        73 ~vi~~~~   79 (141)
T 3llv_A           73 AVLITGS   79 (141)
T ss_dssp             EEEECCS
T ss_pred             EEEEecC
Confidence            9997764

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=98.70  E-value=2.9e-08  Score=86.69  Aligned_cols=111  Identities=17%  Similarity=0.141  Sum_probs=75.3

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHC-CCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEE
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLK-GYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGV   81 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~v   81 (248)
                      ++++++|+|+|+ |++|+++++.|++. |++|++++|+.++. ....+.     .++..+.+|+.|.+++.++++++|+|
T Consensus        20 ~l~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka-~~la~~-----~~~~~~~~D~~d~~~l~~~l~~~DvV   92 (467)
T 2axq_A           20 RHMGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANA-QALAKP-----SGSKAISLDVTDDSALDKVLADNDVV   92 (467)
T ss_dssp             ---CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHH-HHHHGG-----GTCEEEECCTTCHHHHHHHHHTSSEE
T ss_pred             CCCCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHH-HHHHHh-----cCCcEEEEecCCHHHHHHHHcCCCEE
Confidence            367899999997 99999999999998 78999999986322 111111     24667789999999999999999999


Q ss_pred             EEccccCCCCCCC----CccccchhhhH--HHHHHHHHHHHhcCC
Q 025755           82 FHVACPVPVGKVP----NPEVQLIDPAV--VGTKNVLNSCVKAKV  120 (248)
Q Consensus        82 i~~ag~~~~~~~~----~~~~~~~~~n~--~g~~~~~~~~~~~~~  120 (248)
                      ||+++........    .....+++.++  .....+++.+++.++
T Consensus        93 In~tp~~~~~~v~~a~l~~g~~vvd~~~~~p~~~~Ll~~Ak~aGv  137 (467)
T 2axq_A           93 ISLIPYTFHPNVVKSAIRTKTDVVTSSYISPALRELEPEIVKAGI  137 (467)
T ss_dssp             EECSCGGGHHHHHHHHHHHTCEEEECSCCCHHHHHHHHHHHHHTC
T ss_pred             EECCchhhhHHHHHHHHhcCCEEEEeecCCHHHHHHHHHHHHcCC
Confidence            9999864211000    00012333333  235677888887764

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=98.66  E-value=2.6e-07  Score=66.87  Aligned_cols=98  Identities=12%  Similarity=-0.003  Sum_probs=68.4

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHH-hCCCCEEEEc
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAA-TAGCTGVFHV   84 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~-~~~id~vi~~   84 (248)
                      +++|+|+|+ |.+|+.+++.|.+.|++|++++++....  .....    ...+.++.+|..+.+.+.+. ++++|+||++
T Consensus         4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~--~~~~~----~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~   76 (140)
T 1lss_A            4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDIC--KKASA----EIDALVINGDCTKIKTLEDAGIEDADMYIAV   76 (140)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHH--HHHHH----HCSSEEEESCTTSHHHHHHTTTTTCSEEEEC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHH--HHHHH----hcCcEEEEcCCCCHHHHHHcCcccCCEEEEe
Confidence            468999987 9999999999999999999999875321  11111    11456778999998887765 6789999999


Q ss_pred             cccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEe
Q 025755           85 ACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVS  127 (248)
Q Consensus        85 ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vS  127 (248)
                      .+.        .     +.|.    .+.+.++..+.+++|..+
T Consensus        77 ~~~--------~-----~~~~----~~~~~~~~~~~~~ii~~~  102 (140)
T 1lss_A           77 TGK--------E-----EVNL----MSSLLAKSYGINKTIARI  102 (140)
T ss_dssp             CSC--------H-----HHHH----HHHHHHHHTTCCCEEEEC
T ss_pred             eCC--------c-----hHHH----HHHHHHHHcCCCEEEEEe
Confidence            631        1     2232    455566666666777544

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=98.65  E-value=1.6e-07  Score=79.58  Aligned_cols=93  Identities=20%  Similarity=0.137  Sum_probs=70.9

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEEcc
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFHVA   85 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~~a   85 (248)
                      .|||+|.|+ |++|+.+++.|.+ .++|.+.+++..+.     +..   ...+..+..|+.|.+++.+++++.|+||+++
T Consensus        16 ~mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~-----~~~---~~~~~~~~~d~~d~~~l~~~~~~~DvVi~~~   85 (365)
T 3abi_A           16 HMKVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENL-----EKV---KEFATPLKVDASNFDKLVEVMKEFELVIGAL   85 (365)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHH-----HHH---TTTSEEEECCTTCHHHHHHHHTTCSEEEECC
T ss_pred             ccEEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHH-----HHH---hccCCcEEEecCCHHHHHHHHhCCCEEEEec
Confidence            457999998 9999999998865 68999999876321     111   2356778899999999999999999999998


Q ss_pred             ccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEe
Q 025755           86 CPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVS  127 (248)
Q Consensus        86 g~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vS  127 (248)
                      ++.-                  ...++++|.+.+. ++|-+|
T Consensus        86 p~~~------------------~~~v~~~~~~~g~-~yvD~s  108 (365)
T 3abi_A           86 PGFL------------------GFKSIKAAIKSKV-DMVDVS  108 (365)
T ss_dssp             CGGG------------------HHHHHHHHHHHTC-EEEECC
T ss_pred             CCcc------------------cchHHHHHHhcCc-ceEeee
Confidence            5421                  2357888888774 666654

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=98.61  E-value=3e-07  Score=68.03  Aligned_cols=78  Identities=21%  Similarity=0.218  Sum_probs=59.7

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHH-hCCCCEEEE
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAA-TAGCTGVFH   83 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~-~~~id~vi~   83 (248)
                      ..++++|+|+ |.+|+.+++.|.+.|++|++++++..+.. ..+....  ..++.++.+|.+|.+.++++ ++++|.||.
T Consensus         2 ~~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~-~~~~~~~--~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~   77 (153)
T 1id1_A            2 RKDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDI-KQLEQRL--GDNADVIPGDSNDSSVLKKAGIDRCRAILA   77 (153)
T ss_dssp             CCSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHH-HHHHHHH--CTTCEEEESCTTSHHHHHHHTTTTCSEEEE
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHH-HHHHHhh--cCCCeEEEcCCCCHHHHHHcChhhCCEEEE
Confidence            3578999986 99999999999999999999998742111 1111111  23578899999999999887 789999987


Q ss_pred             ccc
Q 025755           84 VAC   86 (248)
Q Consensus        84 ~ag   86 (248)
                      +.+
T Consensus        78 ~~~   80 (153)
T 1id1_A           78 LSD   80 (153)
T ss_dssp             CSS
T ss_pred             ecC
Confidence            763

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=98.57  E-value=1e-07  Score=79.70  Aligned_cols=119  Identities=22%  Similarity=0.069  Sum_probs=79.5

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCC--e-----EEEEEcCCC-chhhHHhhhhcC-CCCCeEEEEccCCCHHHHHHHhC
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGY--M-----VHGTVRDPC-DEKNAHLKKLEG-ASENLQLFKTDLLDYEALCAATA   76 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~--~-----V~~~~r~~~-~~~~~~~~~~~~-~~~~~~~~~~Di~d~~~~~~~~~   76 (248)
                      .++|+||||+|+||++++..|+..|.  +     +++++++.. +........+.. ..+...    ++....+..+.++
T Consensus         3 ~~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~~~~----~~~~~~~~~~~~~   78 (333)
T 5mdh_A            3 PIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLK----DVIATDKEEIAFK   78 (333)
T ss_dssp             CEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEE----EEEEESCHHHHTT
T ss_pred             CeEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhhcccC----CEEEcCCcHHHhC
Confidence            36899999999999999999998775  4     888887542 111111111211 112221    2222234556788


Q ss_pred             CCCEEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCC--EEEEEeccc
Q 025755           77 GCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVK--RVVVVSSIG  130 (248)
Q Consensus        77 ~id~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~--~iV~vSS~~  130 (248)
                      ++|+||+.||.....  ..+-.+.++.|....+++++.+.+.+..  +++.+|-..
T Consensus        79 daDvVvitAg~prkp--G~tR~dll~~N~~i~~~i~~~i~~~~~~~~~vivvsNPv  132 (333)
T 5mdh_A           79 DLDVAILVGSMPRRD--GMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVGNPA  132 (333)
T ss_dssp             TCSEEEECCSCCCCT--TCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSH
T ss_pred             CCCEEEEeCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCch
Confidence            999999999865322  2233678999999999999999998654  578777643

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=98.52  E-value=1.1e-06  Score=72.97  Aligned_cols=115  Identities=16%  Similarity=0.063  Sum_probs=79.6

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCC--CeEEEEEcCCCchhhHHhhhhcCCCC--CeEEEEccCCCHHHHHHHhCCCCEEE
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKG--YMVHGTVRDPCDEKNAHLKKLEGASE--NLQLFKTDLLDYEALCAATAGCTGVF   82 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~Di~d~~~~~~~~~~id~vi   82 (248)
                      +||.|+||+|++|..++..|+..|  .+|++++++..+.   ....+.....  ++....    ...+++.+++++|+||
T Consensus         1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~~~~---~a~dL~~~~~~~~l~~~~----~t~d~~~a~~~aDvVv   73 (314)
T 1mld_A            1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPG---VAADLSHIETRATVKGYL----GPEQLPDCLKGCDVVV   73 (314)
T ss_dssp             CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHH---HHHHHTTSSSSCEEEEEE----SGGGHHHHHTTCSEEE
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCccHH---HHHHHhccCcCceEEEec----CCCCHHHHhCCCCEEE
Confidence            389999999999999999999888  7899999986211   1112221111  122211    1245677789999999


Q ss_pred             EccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCC-CEEEEEeccc
Q 025755           83 HVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKV-KRVVVVSSIG  130 (248)
Q Consensus        83 ~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~-~~iV~vSS~~  130 (248)
                      +++|......  ..-.+++..|+...+.+++.+.+... .++|++|-..
T Consensus        74 i~ag~~~~~g--~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~sNPv  120 (314)
T 1mld_A           74 IPAGVPRKPG--MTRDDLFNTNATIVATLTAACAQHCPDAMICIISNPV  120 (314)
T ss_dssp             ECCSCCCCTT--CCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSSCH
T ss_pred             ECCCcCCCCC--CcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCCc
Confidence            9999754321  22256789999999999999988743 5788776544

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=98.45  E-value=3.5e-06  Score=62.36  Aligned_cols=101  Identities=13%  Similarity=0.084  Sum_probs=70.4

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHH-hCCCCEEE
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAA-TAGCTGVF   82 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~-~~~id~vi   82 (248)
                      ..+++|+|+|+ |.+|+.+++.|.+.|++|++++|+....     +.+.. ......+.+|..+.+.+.++ ++++|+||
T Consensus        17 ~~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~-----~~~~~-~~g~~~~~~d~~~~~~l~~~~~~~ad~Vi   89 (155)
T 2g1u_A           17 QKSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAF-----HRLNS-EFSGFTVVGDAAEFETLKECGMEKADMVF   89 (155)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGG-----GGSCT-TCCSEEEESCTTSHHHHHTTTGGGCSEEE
T ss_pred             cCCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHH-----HHHHh-cCCCcEEEecCCCHHHHHHcCcccCCEEE
Confidence            46789999996 9999999999999999999999886421     11110 12456777899888877765 67899999


Q ss_pred             EccccCCCCCCCCccccchhhhHHHHHHHHHHHHh-cCCCEEEEEec
Q 025755           83 HVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVK-AKVKRVVVVSS  128 (248)
Q Consensus        83 ~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~-~~~~~iV~vSS  128 (248)
                      .+.+..             ..|    ..+++.+++ .+..++|...+
T Consensus        90 ~~~~~~-------------~~~----~~~~~~~~~~~~~~~iv~~~~  119 (155)
T 2g1u_A           90 AFTNDD-------------STN----FFISMNARYMFNVENVIARVY  119 (155)
T ss_dssp             ECSSCH-------------HHH----HHHHHHHHHTSCCSEEEEECS
T ss_pred             EEeCCc-------------HHH----HHHHHHHHHHCCCCeEEEEEC
Confidence            887521             122    345555665 45556666554

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=98.40  E-value=7.7e-07  Score=68.64  Aligned_cols=98  Identities=15%  Similarity=0.106  Sum_probs=63.6

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHH---HHHHhC--CCC
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEA---LCAATA--GCT   79 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~---~~~~~~--~id   79 (248)
                      .+++|+||||+|+||..+++.+...|++|++++++.+.  .+..+.+   ....   ..|..+.+.   +.+...  ++|
T Consensus        38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~--~~~~~~~---g~~~---~~d~~~~~~~~~~~~~~~~~~~D  109 (198)
T 1pqw_A           38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAK--REMLSRL---GVEY---VGDSRSVDFADEILELTDGYGVD  109 (198)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHH--HHHHHTT---CCSE---EEETTCSTHHHHHHHHTTTCCEE
T ss_pred             CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHH--HHHHHHc---CCCE---EeeCCcHHHHHHHHHHhCCCCCe
Confidence            57899999999999999999999999999999987532  1222221   1121   246655433   333332  589


Q ss_pred             EEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccc
Q 025755           80 GVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIG  130 (248)
Q Consensus        80 ~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~  130 (248)
                      +||+|+|..                  .....++.+++  .+++|.+++..
T Consensus       110 ~vi~~~g~~------------------~~~~~~~~l~~--~G~~v~~g~~~  140 (198)
T 1pqw_A          110 VVLNSLAGE------------------AIQRGVQILAP--GGRFIELGKKD  140 (198)
T ss_dssp             EEEECCCTH------------------HHHHHHHTEEE--EEEEEECSCGG
T ss_pred             EEEECCchH------------------HHHHHHHHhcc--CCEEEEEcCCC
Confidence            999998620                  02234444443  36999998743

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=98.38  E-value=1.3e-06  Score=72.24  Aligned_cols=82  Identities=16%  Similarity=0.083  Sum_probs=59.2

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCC-eEEEEEcCCC--chhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCE
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGY-MVHGTVRDPC--DEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTG   80 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~-~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~   80 (248)
                      +++|+++|+|+ |++|++++..|++.|+ +|++++|+.+  +......+.+... ........++.+.+++...+.+.|+
T Consensus       152 l~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~-~~~~~~~~~~~~~~~l~~~l~~aDi  229 (315)
T 3tnl_A          152 IIGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSK-TDCKAQLFDIEDHEQLRKEIAESVI  229 (315)
T ss_dssp             CTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHH-SSCEEEEEETTCHHHHHHHHHTCSE
T ss_pred             ccCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhh-cCCceEEeccchHHHHHhhhcCCCE
Confidence            67899999997 7999999999999998 8999999842  1122222222211 1233445577777778888889999


Q ss_pred             EEEcccc
Q 025755           81 VFHVACP   87 (248)
Q Consensus        81 vi~~ag~   87 (248)
                      |||+...
T Consensus       230 IINaTp~  236 (315)
T 3tnl_A          230 FTNATGV  236 (315)
T ss_dssp             EEECSST
T ss_pred             EEECccC
Confidence            9999754

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.30  E-value=1.6e-06  Score=73.55  Aligned_cols=106  Identities=13%  Similarity=0.001  Sum_probs=69.0

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEE
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFH   83 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~   83 (248)
                      +.+++|+|+|+ |+||+.+++.+...|++|++++|+....  .......  ...   +.+|..+.+++.++++++|+||+
T Consensus       164 l~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~--~~~~~~~--g~~---~~~~~~~~~~l~~~~~~~DvVi~  235 (369)
T 2eez_A          164 VAPASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRL--QYLDDVF--GGR---VITLTATEANIKKSVQHADLLIG  235 (369)
T ss_dssp             BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHH--HHHHHHT--TTS---EEEEECCHHHHHHHHHHCSEEEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHH--HHHHHhc--Cce---EEEecCCHHHHHHHHhCCCEEEE
Confidence            56899999999 9999999999999999999999886321  1111111  112   45677888889888889999999


Q ss_pred             ccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccc
Q 025755           84 VACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIG  130 (248)
Q Consensus        84 ~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~  130 (248)
                      +++.....    . ..++      +...++.+++  .+.||.+|+..
T Consensus       236 ~~g~~~~~----~-~~li------~~~~l~~mk~--gg~iV~v~~~~  269 (369)
T 2eez_A          236 AVLVPGAK----A-PKLV------TRDMLSLMKE--GAVIVDVAVDQ  269 (369)
T ss_dssp             CCC------------CCS------CHHHHTTSCT--TCEEEECC---
T ss_pred             CCCCCccc----c-chhH------HHHHHHhhcC--CCEEEEEecCC
Confidence            99864311    0 0111      1233444432  36899998754

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=98.26  E-value=6.8e-06  Score=62.46  Aligned_cols=75  Identities=16%  Similarity=0.083  Sum_probs=58.0

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHC-CCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHH--hCCCCE
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLK-GYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAA--TAGCTG   80 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~--~~~id~   80 (248)
                      +.+++|+|.| .|.+|..+++.|.+. |++|++++++.+..  .....     ..+..+.+|.++.+.+.++  ++++|+
T Consensus        37 ~~~~~v~IiG-~G~~G~~~a~~L~~~~g~~V~vid~~~~~~--~~~~~-----~g~~~~~gd~~~~~~l~~~~~~~~ad~  108 (183)
T 3c85_A           37 PGHAQVLILG-MGRIGTGAYDELRARYGKISLGIEIREEAA--QQHRS-----EGRNVISGDATDPDFWERILDTGHVKL  108 (183)
T ss_dssp             CTTCSEEEEC-CSHHHHHHHHHHHHHHCSCEEEEESCHHHH--HHHHH-----TTCCEEECCTTCHHHHHTBCSCCCCCE
T ss_pred             CCCCcEEEEC-CCHHHHHHHHHHHhccCCeEEEEECCHHHH--HHHHH-----CCCCEEEcCCCCHHHHHhccCCCCCCE
Confidence            4467899998 599999999999999 99999999886321  11111     2456778999998888887  778999


Q ss_pred             EEEccc
Q 025755           81 VFHVAC   86 (248)
Q Consensus        81 vi~~ag   86 (248)
                      ||.+.+
T Consensus       109 vi~~~~  114 (183)
T 3c85_A          109 VLLAMP  114 (183)
T ss_dssp             EEECCS
T ss_pred             EEEeCC
Confidence            998764

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=98.20  E-value=3e-06  Score=70.97  Aligned_cols=117  Identities=9%  Similarity=-0.003  Sum_probs=76.0

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCC--CeEEEEEcCCCchhh--HHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCC
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKG--YMVHGTVRDPCDEKN--AHLKKLEGASENLQLFKTDLLDYEALCAATAGCT   79 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g--~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id   79 (248)
                      +.++||.|+|++|++|+.++..++..|  .+|++++.+.....-  ..+....-...++.+       ..+....++++|
T Consensus         6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~~~~~i~~-------t~d~~~al~dAD   78 (343)
T 3fi9_A            6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGFEGLNLTF-------TSDIKEALTDAK   78 (343)
T ss_dssp             SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCCTTCCCEE-------ESCHHHHHTTEE
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcCCCCceEE-------cCCHHHHhCCCC
Confidence            457899999999999999999999988  489999886532111  111211101112221       224556688999


Q ss_pred             EEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCE--EEEEecc
Q 025755           80 GVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKR--VVVVSSI  129 (248)
Q Consensus        80 ~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~--iV~vSS~  129 (248)
                      +||.+||.....  ..+-.+.++.|....+.+.+.+.+.....  ++.+|-.
T Consensus        79 vVvitaG~p~kp--G~~R~dLl~~N~~I~~~i~~~i~~~~p~a~~vlvvsNP  128 (343)
T 3fi9_A           79 YIVSSGGAPRKE--GMTREDLLKGNAEIAAQLGKDIKSYCPDCKHVIIIFNP  128 (343)
T ss_dssp             EEEECCC---------CHHHHHHHHHHHHHHHHHHHHHHCTTCCEEEECSSS
T ss_pred             EEEEccCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHhccCcEEEEEecCc
Confidence            999999964322  12225678999999999999998885433  5666643

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=98.20  E-value=2.2e-06  Score=71.53  Aligned_cols=74  Identities=24%  Similarity=0.216  Sum_probs=51.3

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHH----HHHHh-CCCC
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEA----LCAAT-AGCT   79 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~----~~~~~-~~id   79 (248)
                      .+++++|||++|+||..+++.+...|++|++++++...  .+..+.+   ...   ..+|..+.++    +.++. .++|
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~--~~~~~~~---g~~---~~~d~~~~~~~~~~~~~~~~~~~d  216 (333)
T 1v3u_A          145 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEK--IAYLKQI---GFD---AAFNYKTVNSLEEALKKASPDGYD  216 (333)
T ss_dssp             SSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHH--HHHHHHT---TCS---EEEETTSCSCHHHHHHHHCTTCEE
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHhc---CCc---EEEecCCHHHHHHHHHHHhCCCCe
Confidence            47899999999999999999999999999999987532  1222222   112   2246655222    33322 2589


Q ss_pred             EEEEccc
Q 025755           80 GVFHVAC   86 (248)
Q Consensus        80 ~vi~~ag   86 (248)
                      ++|+|+|
T Consensus       217 ~vi~~~g  223 (333)
T 1v3u_A          217 CYFDNVG  223 (333)
T ss_dssp             EEEESSC
T ss_pred             EEEECCC
Confidence            9999997

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=98.19  E-value=2.2e-06  Score=69.62  Aligned_cols=77  Identities=16%  Similarity=0.080  Sum_probs=52.2

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEE
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFH   83 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~   83 (248)
                      +++|+++|+|+ |++|++++..|++.|++|++++|+.++. ....+.+... ..+.  ..|+   +++..  .++|+||+
T Consensus       117 l~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~-~~la~~~~~~-~~~~--~~~~---~~~~~--~~~DivVn  186 (271)
T 1nyt_A          117 RPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRA-EELAKLFAHT-GSIQ--ALSM---DELEG--HEFDLIIN  186 (271)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHH-HHHHHHTGGG-SSEE--ECCS---GGGTT--CCCSEEEE
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHH-HHHHHHhhcc-CCee--EecH---HHhcc--CCCCEEEE
Confidence            67899999998 7899999999999999999999886422 2222222211 1222  2333   23322  58999999


Q ss_pred             ccccCCC
Q 025755           84 VACPVPV   90 (248)
Q Consensus        84 ~ag~~~~   90 (248)
                      +++....
T Consensus       187 ~t~~~~~  193 (271)
T 1nyt_A          187 ATSSGIS  193 (271)
T ss_dssp             CCSCGGG
T ss_pred             CCCCCCC
Confidence            9986543

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=98.17  E-value=4.5e-06  Score=70.13  Aligned_cols=75  Identities=25%  Similarity=0.367  Sum_probs=52.2

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHH----HHHhC-CCC
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEAL----CAATA-GCT   79 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~----~~~~~-~id   79 (248)
                      .+++|+|+|++|+||..+++.+...|++|++++|+....  +..+.+   ...   ...|..+.+++    .++.. ++|
T Consensus       169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~--~~~~~~---g~~---~~~d~~~~~~~~~~~~~~~~~~~D  240 (347)
T 2hcy_A          169 AGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKE--ELFRSI---GGE---VFIDFTKEKDIVGAVLKATDGGAH  240 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHH--HHHHHT---TCC---EEEETTTCSCHHHHHHHHHTSCEE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHH--HHHHHc---CCc---eEEecCccHhHHHHHHHHhCCCCC
Confidence            578999999999999999999999999999999876432  222222   112   12366643333    33222 689


Q ss_pred             EEEEcccc
Q 025755           80 GVFHVACP   87 (248)
Q Consensus        80 ~vi~~ag~   87 (248)
                      +||+++|.
T Consensus       241 ~vi~~~g~  248 (347)
T 2hcy_A          241 GVINVSVS  248 (347)
T ss_dssp             EEEECSSC
T ss_pred             EEEECCCc
Confidence            99999973

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=98.16  E-value=9.2e-06  Score=59.03  Aligned_cols=72  Identities=13%  Similarity=0.052  Sum_probs=56.5

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHH-hCCCCEEEEc
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAA-TAGCTGVFHV   84 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~-~~~id~vi~~   84 (248)
                      .++++|.|. |.+|+.+++.|.+.|++|++++++.+..  ....   .  ..+..+.+|.++.+.++++ ++++|.||-+
T Consensus         7 ~~~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~--~~~~---~--~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~   78 (140)
T 3fwz_A            7 CNHALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTRV--DELR---E--RGVRAVLGNAANEEIMQLAHLECAKWLILT   78 (140)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHH--HHHH---H--TTCEEEESCTTSHHHHHHTTGGGCSEEEEC
T ss_pred             CCCEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHHH--HHHH---H--cCCCEEECCCCCHHHHHhcCcccCCEEEEE
Confidence            468999987 8899999999999999999999986421  1111   1  3567899999999988875 4678988866


Q ss_pred             c
Q 025755           85 A   85 (248)
Q Consensus        85 a   85 (248)
                      .
T Consensus        79 ~   79 (140)
T 3fwz_A           79 I   79 (140)
T ss_dssp             C
T ss_pred             C
Confidence            5

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=98.15  E-value=7.5e-06  Score=64.11  Aligned_cols=72  Identities=19%  Similarity=0.128  Sum_probs=56.7

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHH-hCCCCEEEEcc
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAA-TAGCTGVFHVA   85 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~-~~~id~vi~~a   85 (248)
                      |+|+|+|+ |.+|+.+++.|.++|++|++++++.+..  ..+..    ..++.++.+|.+|.+.++++ ++++|.||-+.
T Consensus         1 M~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~--~~l~~----~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~   73 (218)
T 3l4b_C            1 MKVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELC--EEFAK----KLKATIIHGDGSHKEILRDAEVSKNDVVVILT   73 (218)
T ss_dssp             CCEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHH--HHHHH----HSSSEEEESCTTSHHHHHHHTCCTTCEEEECC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHH--HHHHH----HcCCeEEEcCCCCHHHHHhcCcccCCEEEEec
Confidence            47999996 9999999999999999999999876321  11111    12467899999999999887 67899998655

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=98.12  E-value=3.6e-07  Score=74.92  Aligned_cols=80  Identities=11%  Similarity=-0.010  Sum_probs=51.9

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCC-CCeEEEEccCCCHHHHHHHhCCCCEE
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGAS-ENLQLFKTDLLDYEALCAATAGCTGV   81 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~Di~d~~~~~~~~~~id~v   81 (248)
                      ++++|+++|||++ ++|++++..|++.| +|++++|+.++. ....+.+.... ... .+.+|+.+.   .+.+.++|+|
T Consensus       125 ~l~~k~vlV~GaG-giG~aia~~L~~~G-~V~v~~r~~~~~-~~l~~~~~~~~~~~~-~~~~d~~~~---~~~~~~~Dil  197 (287)
T 1nvt_A          125 RVKDKNIVIYGAG-GAARAVAFELAKDN-NIIIANRTVEKA-EALAKEIAEKLNKKF-GEEVKFSGL---DVDLDGVDII  197 (287)
T ss_dssp             CCCSCEEEEECCS-HHHHHHHHHHTSSS-EEEEECSSHHHH-HHHHHHHHHHHTCCH-HHHEEEECT---TCCCTTCCEE
T ss_pred             CcCCCEEEEECch-HHHHHHHHHHHHCC-CEEEEECCHHHH-HHHHHHHhhhccccc-ceeEEEeeH---HHhhCCCCEE
Confidence            3678999999996 99999999999999 999999876322 22222221100 000 112333331   3345679999


Q ss_pred             EEccccCC
Q 025755           82 FHVACPVP   89 (248)
Q Consensus        82 i~~ag~~~   89 (248)
                      |||++...
T Consensus       198 Vn~ag~~~  205 (287)
T 1nvt_A          198 INATPIGM  205 (287)
T ss_dssp             EECSCTTC
T ss_pred             EECCCCCC
Confidence            99998654

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=98.06  E-value=5.1e-06  Score=67.77  Aligned_cols=80  Identities=16%  Similarity=0.157  Sum_probs=54.2

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCC-eEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEE
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGY-MVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGV   81 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~v   81 (248)
                      .+++|+++|+|+ |++|++++..|++.|. +|++++|+.++. ....+.+......+.+...+.   +++...+++.|+|
T Consensus       124 ~l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a-~~la~~~~~~~~~~~i~~~~~---~~l~~~l~~~DiV  198 (283)
T 3jyo_A          124 NAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRA-QALADVINNAVGREAVVGVDA---RGIEDVIAAADGV  198 (283)
T ss_dssp             TCCCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHH-HHHHHHHHHHHTSCCEEEECS---TTHHHHHHHSSEE
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHH-HHHHHHHHhhcCCceEEEcCH---HHHHHHHhcCCEE
Confidence            367899999998 8999999999999998 799999986432 222222221112223333343   3455566678999


Q ss_pred             EEcccc
Q 025755           82 FHVACP   87 (248)
Q Consensus        82 i~~ag~   87 (248)
                      ||+...
T Consensus       199 InaTp~  204 (283)
T 3jyo_A          199 VNATPM  204 (283)
T ss_dssp             EECSST
T ss_pred             EECCCC
Confidence            999754

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=98.04  E-value=1.3e-05  Score=67.39  Aligned_cols=75  Identities=13%  Similarity=0.072  Sum_probs=52.3

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHH---HHHHHhC--CCC
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYE---ALCAATA--GCT   79 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~---~~~~~~~--~id   79 (248)
                      .+++|+|+|++|+||..+++.+...|++|++++++..+.  ...+.+   ...   ...|..+.+   .+.+...  ++|
T Consensus       170 ~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~--~~~~~~---ga~---~~~d~~~~~~~~~~~~~~~~~~~D  241 (351)
T 1yb5_A          170 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQ--KIVLQN---GAH---EVFNHREVNYIDKIKKYVGEKGID  241 (351)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHH--HHHHHT---TCS---EEEETTSTTHHHHHHHHHCTTCEE
T ss_pred             CcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHH--HHHHHc---CCC---EEEeCCCchHHHHHHHHcCCCCcE
Confidence            478999999999999999999999999999999875322  222222   112   123555433   3444333  689


Q ss_pred             EEEEcccc
Q 025755           80 GVFHVACP   87 (248)
Q Consensus        80 ~vi~~ag~   87 (248)
                      +||+|+|.
T Consensus       242 ~vi~~~G~  249 (351)
T 1yb5_A          242 IIIEMLAN  249 (351)
T ss_dssp             EEEESCHH
T ss_pred             EEEECCCh
Confidence            99999983

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=98.03  E-value=8.1e-06  Score=67.92  Aligned_cols=74  Identities=15%  Similarity=0.079  Sum_probs=51.5

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHH---HHHHHhC--CCC
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYE---ALCAATA--GCT   79 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~---~~~~~~~--~id   79 (248)
                      .+++|+||||+|+||..+++.+...|++|++++++..+  ....+.+   ....   ..|..+.+   .+.+...  ++|
T Consensus       140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~--~~~~~~~---g~~~---~~~~~~~~~~~~~~~~~~~~~~D  211 (327)
T 1qor_A          140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQK--AQSALKA---GAWQ---VINYREEDLVERLKEITGGKKVR  211 (327)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHH--HHHHHHH---TCSE---EEETTTSCHHHHHHHHTTTCCEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHH--HHHHHHc---CCCE---EEECCCccHHHHHHHHhCCCCce
Confidence            47899999999999999999999999999999987532  2222222   1121   23555433   3333332  589


Q ss_pred             EEEEccc
Q 025755           80 GVFHVAC   86 (248)
Q Consensus        80 ~vi~~ag   86 (248)
                      +||+|+|
T Consensus       212 ~vi~~~g  218 (327)
T 1qor_A          212 VVYDSVG  218 (327)
T ss_dssp             EEEECSC
T ss_pred             EEEECCc
Confidence            9999998

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=98.01  E-value=1.9e-05  Score=65.23  Aligned_cols=83  Identities=18%  Similarity=0.071  Sum_probs=55.7

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCC-eEEEEEcCCCc--hhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCE
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGY-MVHGTVRDPCD--EKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTG   80 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~-~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~   80 (248)
                      +++|+++|+|+ |++|++++..|++.|. +|+++.|+.+.  ..+...+.+... ........+..+.+.+...+.+.|+
T Consensus       146 l~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~-~~~~v~~~~~~~l~~~~~~l~~~Di  223 (312)
T 3t4e_A          146 MRGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNEN-TDCVVTVTDLADQHAFTEALASADI  223 (312)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHH-SSCEEEEEETTCHHHHHHHHHHCSE
T ss_pred             cCCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhc-cCcceEEechHhhhhhHhhccCceE
Confidence            67899999997 8999999999999998 89999998431  112222222211 1223334455554444555667899


Q ss_pred             EEEccccC
Q 025755           81 VFHVACPV   88 (248)
Q Consensus        81 vi~~ag~~   88 (248)
                      |||+....
T Consensus       224 IINaTp~G  231 (312)
T 3t4e_A          224 LTNGTKVG  231 (312)
T ss_dssp             EEECSSTT
T ss_pred             EEECCcCC
Confidence            99986543

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=98.00  E-value=9.3e-06  Score=67.76  Aligned_cols=75  Identities=19%  Similarity=0.187  Sum_probs=52.3

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHH---HHHHHh--CCCC
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYE---ALCAAT--AGCT   79 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~---~~~~~~--~~id   79 (248)
                      .+++|+|+||+|+||..+++.+...|++|++++++..+  .+..+.+   ....   ..|..+.+   .+.+..  .++|
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~--~~~~~~~---g~~~---~~d~~~~~~~~~i~~~~~~~~~d  216 (333)
T 1wly_A          145 PGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEK--AETARKL---GCHH---TINYSTQDFAEVVREITGGKGVD  216 (333)
T ss_dssp             TTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHH--HHHHHHH---TCSE---EEETTTSCHHHHHHHHHTTCCEE
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHHc---CCCE---EEECCCHHHHHHHHHHhCCCCCe
Confidence            47899999999999999999999999999999987532  2222222   1121   23555433   344433  2689


Q ss_pred             EEEEcccc
Q 025755           80 GVFHVACP   87 (248)
Q Consensus        80 ~vi~~ag~   87 (248)
                      +||+|+|.
T Consensus       217 ~vi~~~g~  224 (333)
T 1wly_A          217 VVYDSIGK  224 (333)
T ss_dssp             EEEECSCT
T ss_pred             EEEECCcH
Confidence            99999984

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=97.99  E-value=1.3e-05  Score=67.56  Aligned_cols=75  Identities=11%  Similarity=0.002  Sum_probs=52.3

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHH---HHHHHhC--CCC
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYE---ALCAATA--GCT   79 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~---~~~~~~~--~id   79 (248)
                      .+++|+|+||+|+||..+++.+...|++|++++++..+  ....+.+.   ..   ...|..+.+   .+.+...  ++|
T Consensus       162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~--~~~~~~~g---~~---~~~~~~~~~~~~~~~~~~~~~~~d  233 (354)
T 2j8z_A          162 AGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKK--LQMAEKLG---AA---AGFNYKKEDFSEATLKFTKGAGVN  233 (354)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHH--HHHHHHHT---CS---EEEETTTSCHHHHHHHHTTTSCEE
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHH--HHHHHHcC---Cc---EEEecCChHHHHHHHHHhcCCCce
Confidence            47899999999999999999999999999999987532  22223221   12   123554433   3444433  689


Q ss_pred             EEEEcccc
Q 025755           80 GVFHVACP   87 (248)
Q Consensus        80 ~vi~~ag~   87 (248)
                      ++|+|+|.
T Consensus       234 ~vi~~~G~  241 (354)
T 2j8z_A          234 LILDCIGG  241 (354)
T ss_dssp             EEEESSCG
T ss_pred             EEEECCCc
Confidence            99999984

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=97.99  E-value=1.7e-05  Score=65.20  Aligned_cols=78  Identities=14%  Similarity=0.026  Sum_probs=55.1

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCC-eEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEE
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGY-MVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGV   81 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~v   81 (248)
                      .+++|+++|+|+ |++|++++..|++.|+ +|++++|+.++ .....+.+.....       ++.+.+++...+.++|+|
T Consensus       138 ~l~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~k-a~~la~~~~~~~~-------~~~~~~~~~~~~~~aDiv  208 (297)
T 2egg_A          138 TLDGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEK-AERLVREGDERRS-------AYFSLAEAETRLAEYDII  208 (297)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHH-HHHHHHHSCSSSC-------CEECHHHHHHTGGGCSEE
T ss_pred             CCCCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHH-HHHHHHHhhhccC-------ceeeHHHHHhhhccCCEE
Confidence            367899999998 7899999999999998 99999998632 2222222211111       222345677778889999


Q ss_pred             EEccccCC
Q 025755           82 FHVACPVP   89 (248)
Q Consensus        82 i~~ag~~~   89 (248)
                      |++.+...
T Consensus       209 In~t~~~~  216 (297)
T 2egg_A          209 INTTSVGM  216 (297)
T ss_dssp             EECSCTTC
T ss_pred             EECCCCCC
Confidence            99987644

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=97.96  E-value=8.9e-05  Score=61.62  Aligned_cols=116  Identities=12%  Similarity=0.112  Sum_probs=76.9

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCC--eEEEEEcCCCchhh--HHhhhhcCC-CCCeEEEEccCCCHHHHHHHhCCC
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGY--MVHGTVRDPCDEKN--AHLKKLEGA-SENLQLFKTDLLDYEALCAATAGC   78 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~--~V~~~~r~~~~~~~--~~~~~~~~~-~~~~~~~~~Di~d~~~~~~~~~~i   78 (248)
                      ..+++|.|+|+ |.+|..++..|+..|.  +|++++++......  ..+...... ...+.....|   .    +.++++
T Consensus         3 ~~~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~---~----~a~~~a   74 (326)
T 3pqe_A            3 KHVNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGT---Y----EDCKDA   74 (326)
T ss_dssp             CSCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEEC---G----GGGTTC
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCc---H----HHhCCC
Confidence            45679999996 9999999999999886  89999986532211  112211111 1234444333   1    357789


Q ss_pred             CEEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCC-CEEEEEecc
Q 025755           79 TGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKV-KRVVVVSSI  129 (248)
Q Consensus        79 d~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~-~~iV~vSS~  129 (248)
                      |+||.+||.....  ...-.+.++.|......+++.+.+... ..++.+|-.
T Consensus        75 DvVvi~ag~p~kp--G~~R~dL~~~N~~Iv~~i~~~I~~~~p~a~vlvvtNP  124 (326)
T 3pqe_A           75 DIVCICAGANQKP--GETRLELVEKNLKIFKGIVSEVMASGFDGIFLVATNP  124 (326)
T ss_dssp             SEEEECCSCCCCT--TCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECSSS
T ss_pred             CEEEEecccCCCC--CccHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcCCh
Confidence            9999999864322  122246789999999999999988743 466666643

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=97.95  E-value=6.3e-06  Score=61.25  Aligned_cols=74  Identities=16%  Similarity=0.046  Sum_probs=52.3

Q ss_pred             ccHHHHHHHHHHHHCCCeEEEEEcCCCchhh--HHhhhhcCCCCCeEEEEccCCCH--HHHHHHhC------CCCEEEEc
Q 025755           15 GGYIASWLVKYLLLKGYMVHGTVRDPCDEKN--AHLKKLEGASENLQLFKTDLLDY--EALCAATA------GCTGVFHV   84 (248)
Q Consensus        15 ~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~Di~d~--~~~~~~~~------~id~vi~~   84 (248)
                      ++.++.+.++.|++.|++|++..|+..+...  ...+.....+.+...+.+|++++  ++++++++      +-|++|||
T Consensus        25 s~~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~~G~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~G~dVLVnn  104 (157)
T 3gxh_A           25 SGLPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQAGMDYVYIPVDWQNPKVEDVEAFFAAMDQHKGKDVLVHC  104 (157)
T ss_dssp             EBCCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHHTTCEEEECCCCTTSCCHHHHHHHHHHHHHTTTSCEEEEC
T ss_pred             cCCCCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHHcCCeEEEecCCCCCCCHHHHHHHHHHHHhcCCCCEEEEC
Confidence            4568899999999999999998886543211  11222222345577788999998  88877664      22999999


Q ss_pred             cccC
Q 025755           85 ACPV   88 (248)
Q Consensus        85 ag~~   88 (248)
                      ||..
T Consensus       105 Agg~  108 (157)
T 3gxh_A          105 LANY  108 (157)
T ss_dssp             SBSH
T ss_pred             CCCC
Confidence            9864

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=97.95  E-value=1.2e-05  Score=67.32  Aligned_cols=74  Identities=20%  Similarity=0.173  Sum_probs=50.6

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhh-hhcCCCCCeEEEEccCCCH----HHHHHHh-CCC
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLK-KLEGASENLQLFKTDLLDY----EALCAAT-AGC   78 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~Di~d~----~~~~~~~-~~i   78 (248)
                      .+++|+|+|++|+||..+++.+...|++|++++++..+  .+... .+   ....   ..|..+.    +.+.++. .++
T Consensus       155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~--~~~~~~~~---g~~~---~~d~~~~~~~~~~~~~~~~~~~  226 (345)
T 2j3h_A          155 EGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEK--VDLLKTKF---GFDD---AFNYKEESDLTAALKRCFPNGI  226 (345)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHH--HHHHHHTS---CCSE---EEETTSCSCSHHHHHHHCTTCE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHHHc---CCce---EEecCCHHHHHHHHHHHhCCCC
Confidence            47899999999999999999999999999999987532  12222 22   1121   2355432    2333332 268


Q ss_pred             CEEEEccc
Q 025755           79 TGVFHVAC   86 (248)
Q Consensus        79 d~vi~~ag   86 (248)
                      |+||+|+|
T Consensus       227 d~vi~~~g  234 (345)
T 2j3h_A          227 DIYFENVG  234 (345)
T ss_dssp             EEEEESSC
T ss_pred             cEEEECCC
Confidence            99999987

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=97.94  E-value=3.3e-06  Score=74.94  Aligned_cols=104  Identities=14%  Similarity=0.004  Sum_probs=59.2

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHH-HhCCCCEEE
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCA-ATAGCTGVF   82 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~-~~~~id~vi   82 (248)
                      +++|+++|||| ||+|++++..|++.|++|++++|+.++. ....+.+.   .++  +  ++.|   +.. ....+|+||
T Consensus       362 l~~k~vlV~Ga-GGig~aia~~L~~~G~~V~i~~R~~~~a-~~la~~~~---~~~--~--~~~d---l~~~~~~~~DilV  429 (523)
T 2o7s_A          362 LASKTVVVIGA-GGAGKALAYGAKEKGAKVVIANRTYERA-LELAEAIG---GKA--L--SLTD---LDNYHPEDGMVLA  429 (523)
T ss_dssp             ----CEEEECC-SHHHHHHHHHHHHHCC-CEEEESSHHHH-HHHHHHTT---C-C--E--ETTT---TTTC--CCSEEEE
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHH-HHHHHHcC---Cce--e--eHHH---hhhccccCceEEE
Confidence            56789999999 5999999999999999999999986422 22222221   122  1  1212   222 123589999


Q ss_pred             EccccCCCC-----CC----CCccccchhhhHHHH-HHHHHHHHhcC
Q 025755           83 HVACPVPVG-----KV----PNPEVQLIDPAVVGT-KNVLNSCVKAK  119 (248)
Q Consensus        83 ~~ag~~~~~-----~~----~~~~~~~~~~n~~g~-~~~~~~~~~~~  119 (248)
                      ||+|.....     ..    .+.+..++++|+.+. ..+++.+++.|
T Consensus       430 N~agvg~~~~~~~~~~~~~~~~~~~~v~Dvny~p~~T~ll~~a~~~G  476 (523)
T 2o7s_A          430 NTTSMGMQPNVEETPISKDALKHYALVFDAVYTPRITRLLREAEESG  476 (523)
T ss_dssp             ECSSTTCTTCTTCCSSCTTTGGGEEEEEECCCSSSSCHHHHHHHTTT
T ss_pred             ECCCCCCCCCCCCCCCChHHcCcCcEEEEEeeCCccCHHHHHHHHCC
Confidence            999864321     11    123345677777652 24555555544

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=97.93  E-value=2.8e-05  Score=64.89  Aligned_cols=75  Identities=24%  Similarity=0.230  Sum_probs=51.1

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHh-hhhcCCCCCeEEEEccCCCHH---HHHHHh-CCCC
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHL-KKLEGASENLQLFKTDLLDYE---ALCAAT-AGCT   79 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~Di~d~~---~~~~~~-~~id   79 (248)
                      .+++|+|+|++|+||..+++.+...|++|++++++..  ..+.. +.+   ....   ..|..+.+   .+.+.. .++|
T Consensus       149 ~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~--~~~~~~~~~---g~~~---~~~~~~~~~~~~~~~~~~~~~d  220 (336)
T 4b7c_A          149 NGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAE--KCRFLVEEL---GFDG---AIDYKNEDLAAGLKRECPKGID  220 (336)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHH--HHHHHHHTT---CCSE---EEETTTSCHHHHHHHHCTTCEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHH--HHHHHHHHc---CCCE---EEECCCHHHHHHHHHhcCCCce
Confidence            5789999999999999999999999999999998763  22222 222   1111   23444433   233332 2589


Q ss_pred             EEEEcccc
Q 025755           80 GVFHVACP   87 (248)
Q Consensus        80 ~vi~~ag~   87 (248)
                      +||+|+|.
T Consensus       221 ~vi~~~g~  228 (336)
T 4b7c_A          221 VFFDNVGG  228 (336)
T ss_dssp             EEEESSCH
T ss_pred             EEEECCCc
Confidence            99999973

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=97.92  E-value=5.1e-05  Score=63.01  Aligned_cols=116  Identities=13%  Similarity=0.143  Sum_probs=67.2

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCC--eEEEEEcCCCchhh--HHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCC
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGY--MVHGTVRDPCDEKN--AHLKKLEGASENLQLFKTDLLDYEALCAATAGCT   79 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~--~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id   79 (248)
                      ..+++|.|+|+ |.+|+.++..|+..|.  ++++++++.....-  ..+.........+.....|       ...++++|
T Consensus         7 ~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~~-------~~a~~~aD   78 (326)
T 3vku_A            7 KDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSAE-------YSDAKDAD   78 (326)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECC-------GGGGTTCS
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEECc-------HHHhcCCC
Confidence            35689999996 9999999999999886  89999986532211  1111111111234443322       23578899


Q ss_pred             EEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCC-CEEEEEecc
Q 025755           80 GVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKV-KRVVVVSSI  129 (248)
Q Consensus        80 ~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~-~~iV~vSS~  129 (248)
                      +||.+||.....  ...-.+.++.|..-.+.+.+.+.+... ..++.+|-.
T Consensus        79 iVvi~ag~~~kp--G~tR~dL~~~N~~I~~~i~~~i~~~~p~a~ilvvtNP  127 (326)
T 3vku_A           79 LVVITAGAPQKP--GETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAANP  127 (326)
T ss_dssp             EEEECCCCC------------------CHHHHHHHHHTTTCCSEEEECSSS
T ss_pred             EEEECCCCCCCC--CchHHHHHHHHHHHHHHHHHHHHhcCCceEEEEccCc
Confidence            999999964322  122256788899889999999988743 456666543

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=97.91  E-value=0.00028  Score=58.77  Aligned_cols=113  Identities=16%  Similarity=0.090  Sum_probs=72.3

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCC-eEEEEEcCCCchhh--HHhhhh---cCCCCCeEEEEccCCCHHHHHHHhCCCC
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGY-MVHGTVRDPCDEKN--AHLKKL---EGASENLQLFKTDLLDYEALCAATAGCT   79 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~--~~~~~~---~~~~~~~~~~~~Di~d~~~~~~~~~~id   79 (248)
                      .++|.|+|+ |.+|..++..|+..|+ +|++++++.+....  ..+...   .....++...    .   +++..++++|
T Consensus         9 ~~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t----~---d~~ea~~~aD   80 (331)
T 1pzg_A            9 RKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAE----Y---SYEAALTGAD   80 (331)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEE----C---SHHHHHTTCS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEEe----C---CHHHHhCCCC
Confidence            468999998 9999999999999998 99999998753322  111111   1111223221    2   3444678999


Q ss_pred             EEEEccccCCCCCCCC---ccccchhhhHHHHHHHHHHHHhcCCCEEEEE
Q 025755           80 GVFHVACPVPVGKVPN---PEVQLIDPAVVGTKNVLNSCVKAKVKRVVVV  126 (248)
Q Consensus        80 ~vi~~ag~~~~~~~~~---~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~v  126 (248)
                      +||-++|.........   .-.+....|+.-.+.+.+.+.+.....++.+
T Consensus        81 iVi~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~  130 (331)
T 1pzg_A           81 CVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIV  130 (331)
T ss_dssp             EEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEE
T ss_pred             EEEEccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEE
Confidence            9999998643221100   2245677888888888888887744334333

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=97.91  E-value=2.7e-05  Score=65.57  Aligned_cols=72  Identities=18%  Similarity=0.110  Sum_probs=49.8

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCCC-eEEEEEcCCCchhhHHhhh-hcCCCCCeEEEEccCCCHH---HHHHHhC-CCCE
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKGY-MVHGTVRDPCDEKNAHLKK-LEGASENLQLFKTDLLDYE---ALCAATA-GCTG   80 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~Di~d~~---~~~~~~~-~id~   80 (248)
                      ++|+|+|++|+||..+++.+...|+ +|++++++..+  ...... +   ...   ...|..+.+   .+.+... ++|+
T Consensus       162 ~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~--~~~~~~~~---g~~---~~~d~~~~~~~~~~~~~~~~~~d~  233 (357)
T 2zb4_A          162 KTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEK--CILLTSEL---GFD---AAINYKKDNVAEQLRESCPAGVDV  233 (357)
T ss_dssp             CEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHH--HHHHHHTS---CCS---EEEETTTSCHHHHHHHHCTTCEEE
T ss_pred             cEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHH--HHHHHHHc---CCc---eEEecCchHHHHHHHHhcCCCCCE
Confidence            8999999999999999999999999 99999987532  122221 2   112   124555432   3333332 5899


Q ss_pred             EEEccc
Q 025755           81 VFHVAC   86 (248)
Q Consensus        81 vi~~ag   86 (248)
                      +|+|+|
T Consensus       234 vi~~~G  239 (357)
T 2zb4_A          234 YFDNVG  239 (357)
T ss_dssp             EEESCC
T ss_pred             EEECCC
Confidence            999998

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=97.89  E-value=2.4e-05  Score=65.68  Aligned_cols=75  Identities=16%  Similarity=0.166  Sum_probs=52.3

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHC-CCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCH---HHHHHHh--CCC
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLK-GYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDY---EALCAAT--AGC   78 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~---~~~~~~~--~~i   78 (248)
                      .+++|+|+|++|+||..+++.+... |++|++++++..+  .+..+.+   .... .  .|..+.   +.+.++.  .++
T Consensus       170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~--~~~~~~~---g~~~-~--~~~~~~~~~~~~~~~~~~~~~  241 (347)
T 1jvb_A          170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEA--VEAAKRA---GADY-V--INASMQDPLAEIRRITESKGV  241 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHH--HHHHHHH---TCSE-E--EETTTSCHHHHHHHHTTTSCE
T ss_pred             CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHH--HHHHHHh---CCCE-E--ecCCCccHHHHHHHHhcCCCc
Confidence            5789999999999999999999998 9999999987532  2222222   1121 1  244433   2355555  368


Q ss_pred             CEEEEcccc
Q 025755           79 TGVFHVACP   87 (248)
Q Consensus        79 d~vi~~ag~   87 (248)
                      |+||+++|.
T Consensus       242 d~vi~~~g~  250 (347)
T 1jvb_A          242 DAVIDLNNS  250 (347)
T ss_dssp             EEEEESCCC
T ss_pred             eEEEECCCC
Confidence            999999984

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=97.87  E-value=2.3e-05  Score=61.93  Aligned_cols=70  Identities=14%  Similarity=0.016  Sum_probs=56.0

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHH-hCCCCEEEEc
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAA-TAGCTGVFHV   84 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~-~~~id~vi~~   84 (248)
                      .++++|.|+ |.+|+.+++.|.+.|+ |++++++...     .+.+.   .++.++.+|.+|.+.++++ ++++|.||.+
T Consensus         9 ~~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~~~-----~~~~~---~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~   78 (234)
T 2aef_A            9 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVR-----KKVLR---SGANFVHGDPTRVSDLEKANVRGARAVIVD   78 (234)
T ss_dssp             -CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGGGH-----HHHHH---TTCEEEESCTTCHHHHHHTTCTTCSEEEEC
T ss_pred             CCEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCHHH-----HHHHh---cCCeEEEcCCCCHHHHHhcCcchhcEEEEc
Confidence            468999997 8999999999999999 9999887532     11122   3478899999999999887 7889999876


Q ss_pred             c
Q 025755           85 A   85 (248)
Q Consensus        85 a   85 (248)
                      .
T Consensus        79 ~   79 (234)
T 2aef_A           79 L   79 (234)
T ss_dssp             C
T ss_pred             C
Confidence            5

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=97.85  E-value=8.4e-05  Score=61.47  Aligned_cols=115  Identities=19%  Similarity=0.138  Sum_probs=76.4

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCC-eEEEEEcCC-CchhhH---Hhhh---hcCCCCCeEEEEccCCCHHHHHHHh
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGY-MVHGTVRDP-CDEKNA---HLKK---LEGASENLQLFKTDLLDYEALCAAT   75 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~-~V~~~~r~~-~~~~~~---~~~~---~~~~~~~~~~~~~Di~d~~~~~~~~   75 (248)
                      ++.++|.|+|+ |.+|..++..|+..|+ +|++++++. .+....   .+..   +.....++... .|   .    ..+
T Consensus         6 ~~~~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t-~d---~----~a~   76 (315)
T 3tl2_A            6 IKRKKVSVIGA-GFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIGT-SD---Y----ADT   76 (315)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEE-SC---G----GGG
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEEc-CC---H----HHh
Confidence            56689999997 9999999999999999 999999983 111111   1111   11112223221 22   2    357


Q ss_pred             CCCCEEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCC-CEEEEEecc
Q 025755           76 AGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKV-KRVVVVSSI  129 (248)
Q Consensus        76 ~~id~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~-~~iV~vSS~  129 (248)
                      +++|+||.++|......  ..-.+.++.|....+.+.+.+.+... ..++.+|-.
T Consensus        77 ~~aDvVIiaag~p~kpg--~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vlvvsNP  129 (315)
T 3tl2_A           77 ADSDVVVITAGIARKPG--MSRDDLVATNSKIMKSITRDIAKHSPNAIIVVLTNP  129 (315)
T ss_dssp             TTCSEEEECCSCCCCTT--CCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSS
T ss_pred             CCCCEEEEeCCCCCCCC--CCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEECCCh
Confidence            78999999998744321  22256789999999999999988743 466666643

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=97.82  E-value=5e-05  Score=63.30  Aligned_cols=98  Identities=14%  Similarity=0.084  Sum_probs=63.6

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCC---HHHHHHHhC--CCC
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLD---YEALCAATA--GCT   79 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d---~~~~~~~~~--~id   79 (248)
                      .+++|+|+||+|+||..+++.+...|++|++++++..+  ....+.+   ..+. .  .|..+   .+.+.+...  ++|
T Consensus       148 ~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~--~~~~~~~---ga~~-~--~~~~~~~~~~~~~~~~~~~g~D  219 (334)
T 3qwb_A          148 KGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEK--LKIAKEY---GAEY-L--INASKEDILRQVLKFTNGKGVD  219 (334)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHH--HHHHHHT---TCSE-E--EETTTSCHHHHHHHHTTTSCEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHHc---CCcE-E--EeCCCchHHHHHHHHhCCCCce
Confidence            57899999999999999999999999999999987532  2222322   1222 2  23333   234444442  589


Q ss_pred             EEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccc
Q 025755           80 GVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIG  130 (248)
Q Consensus        80 ~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~  130 (248)
                      +||+|+|...                  ....++.+++  .+++|.++...
T Consensus       220 ~vid~~g~~~------------------~~~~~~~l~~--~G~iv~~G~~~  250 (334)
T 3qwb_A          220 ASFDSVGKDT------------------FEISLAALKR--KGVFVSFGNAS  250 (334)
T ss_dssp             EEEECCGGGG------------------HHHHHHHEEE--EEEEEECCCTT
T ss_pred             EEEECCChHH------------------HHHHHHHhcc--CCEEEEEcCCC
Confidence            9999998410                  2234444443  36999987643

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=97.80  E-value=4.1e-05  Score=64.71  Aligned_cols=77  Identities=16%  Similarity=0.067  Sum_probs=54.6

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEE
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFH   83 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~   83 (248)
                      +++++|+|+|+ |++|+.+++.+...|++|++++|+....  +.......  ..+..   +..+.+++.+.++++|+||+
T Consensus       165 l~~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~--~~~~~~~~--~~~~~---~~~~~~~~~~~~~~~DvVI~  236 (361)
T 1pjc_A          165 VKPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERL--SYLETLFG--SRVEL---LYSNSAEIETAVAEADLLIG  236 (361)
T ss_dssp             BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHH--HHHHHHHG--GGSEE---EECCHHHHHHHHHTCSEEEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHH--HHHHHhhC--ceeEe---eeCCHHHHHHHHcCCCEEEE
Confidence            45689999999 9999999999999999999999986422  11221111  11211   22345667777779999999


Q ss_pred             ccccC
Q 025755           84 VACPV   88 (248)
Q Consensus        84 ~ag~~   88 (248)
                      +++..
T Consensus       237 ~~~~~  241 (361)
T 1pjc_A          237 AVLVP  241 (361)
T ss_dssp             CCCCT
T ss_pred             CCCcC
Confidence            99763

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=97.77  E-value=8.8e-05  Score=60.10  Aligned_cols=76  Identities=13%  Similarity=0.087  Sum_probs=50.2

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEE
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFH   83 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~   83 (248)
                      +++|+++|+|+ |++|++++..|++.|++|++++|+.++. ....+.+... ..+..  .|+   +++.+  .++|+||+
T Consensus       117 ~~~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~~~a-~~l~~~~~~~-~~~~~--~~~---~~~~~--~~~DivIn  186 (272)
T 1p77_A          117 RPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKT-KELAERFQPY-GNIQA--VSM---DSIPL--QTYDLVIN  186 (272)
T ss_dssp             CTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHH-HHHHHHHGGG-SCEEE--EEG---GGCCC--SCCSEEEE
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHH-HHHHHHcccc-CCeEE--eeH---HHhcc--CCCCEEEE
Confidence            57899999998 7899999999999999999999986422 2222222211 12322  232   22111  37999999


Q ss_pred             ccccCC
Q 025755           84 VACPVP   89 (248)
Q Consensus        84 ~ag~~~   89 (248)
                      +++...
T Consensus       187 ~t~~~~  192 (272)
T 1p77_A          187 ATSAGL  192 (272)
T ss_dssp             CCCC--
T ss_pred             CCCCCC
Confidence            998654

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=97.77  E-value=4.2e-05  Score=63.58  Aligned_cols=75  Identities=23%  Similarity=0.241  Sum_probs=51.8

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCC---HHHHHHHhC--CCC
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLD---YEALCAATA--GCT   79 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d---~~~~~~~~~--~id   79 (248)
                      .+++|+|+||+|+||..+++.+...|++|++++++..+  .+..+.+   ... ..  .|..+   .+.+.+...  ++|
T Consensus       140 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~--~~~~~~~---Ga~-~~--~~~~~~~~~~~~~~~~~~~g~D  211 (325)
T 3jyn_A          140 PGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEK--AAHAKAL---GAW-ET--IDYSHEDVAKRVLELTDGKKCP  211 (325)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHH--HHHHHHH---TCS-EE--EETTTSCHHHHHHHHTTTCCEE
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHHc---CCC-EE--EeCCCccHHHHHHHHhCCCCce
Confidence            47899999999999999999999999999999987532  2222322   112 12  23333   234444443  689


Q ss_pred             EEEEcccc
Q 025755           80 GVFHVACP   87 (248)
Q Consensus        80 ~vi~~ag~   87 (248)
                      +||+++|.
T Consensus       212 vvid~~g~  219 (325)
T 3jyn_A          212 VVYDGVGQ  219 (325)
T ss_dssp             EEEESSCG
T ss_pred             EEEECCCh
Confidence            99999984

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=97.77  E-value=4.3e-05  Score=64.25  Aligned_cols=75  Identities=15%  Similarity=0.095  Sum_probs=51.5

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCH---HHHHHHh-CCCCE
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDY---EALCAAT-AGCTG   80 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~---~~~~~~~-~~id~   80 (248)
                      .+++|+|+||+|+||..+++.+...|++|++++++..+  .+..+.+.   ... .  .|..+.   +.+.+.. .++|+
T Consensus       167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~--~~~~~~lG---a~~-~--~~~~~~~~~~~~~~~~~~g~Dv  238 (353)
T 4dup_A          167 EGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGK--CEACERLG---AKR-G--INYRSEDFAAVIKAETGQGVDI  238 (353)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHH--HHHHHHHT---CSE-E--EETTTSCHHHHHHHHHSSCEEE
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHH--HHHHHhcC---CCE-E--EeCCchHHHHHHHHHhCCCceE
Confidence            47899999999999999999999999999999987642  22223221   121 2  233332   2333332 36899


Q ss_pred             EEEcccc
Q 025755           81 VFHVACP   87 (248)
Q Consensus        81 vi~~ag~   87 (248)
                      +|+|+|.
T Consensus       239 vid~~g~  245 (353)
T 4dup_A          239 ILDMIGA  245 (353)
T ss_dssp             EEESCCG
T ss_pred             EEECCCH
Confidence            9999974

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=97.77  E-value=8.6e-05  Score=62.05  Aligned_cols=75  Identities=13%  Similarity=0.189  Sum_probs=52.0

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCH---HHHHHHhC--CCC
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDY---EALCAATA--GCT   79 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~---~~~~~~~~--~id   79 (248)
                      .+++|+|+|++|+||..+++.+...|++|++++++..+.  +..+.+   ..+. .  .|..+.   +.+.+...  ++|
T Consensus       144 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~--~~~~~l---ga~~-~--~~~~~~~~~~~~~~~~~~~g~D  215 (340)
T 3gms_A          144 RNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHT--EELLRL---GAAY-V--IDTSTAPLYETVMELTNGIGAD  215 (340)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTH--HHHHHH---TCSE-E--EETTTSCHHHHHHHHTTTSCEE
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHH--HHHHhC---CCcE-E--EeCCcccHHHHHHHHhCCCCCc
Confidence            478999999999999999999988999999999887532  222322   1121 2  233332   33444433  689


Q ss_pred             EEEEcccc
Q 025755           80 GVFHVACP   87 (248)
Q Consensus        80 ~vi~~ag~   87 (248)
                      +||+|+|.
T Consensus       216 vvid~~g~  223 (340)
T 3gms_A          216 AAIDSIGG  223 (340)
T ss_dssp             EEEESSCH
T ss_pred             EEEECCCC
Confidence            99999974

>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*

Probab=97.76  E-value=0.00026  Score=58.61  Aligned_cols=116  Identities=16%  Similarity=0.227  Sum_probs=74.7

Q ss_pred             CCCCCCcEEEEEcCccHHHHHHHHHHHHCCC--eEEEEEcCCCchhhHHhhhhc---C-CCCCeEEEEccCCCHHHHHHH
Q 025755            1 MSGEDKERVCVTGAGGYIASWLVKYLLLKGY--MVHGTVRDPCDEKNAHLKKLE---G-ASENLQLFKTDLLDYEALCAA   74 (248)
Q Consensus         1 m~~l~~k~vlVtG~~g~iG~~~~~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~---~-~~~~~~~~~~Di~d~~~~~~~   74 (248)
                      |.+.++++|.|+|+ |.+|..++..|+..|.  +|++++++.. ........+.   . ....+.+.. |  +.    ..
T Consensus         1 m~~~~~~kI~IIGa-G~vG~sla~~l~~~~~~~ev~l~Di~~~-~~~~~~~dl~~~~~~~~~~~~i~~-~--~~----~a   71 (316)
T 1ldn_A            1 MKNNGGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANES-KAIGDAMDFNHGKVFAPKPVDIWH-G--DY----DD   71 (316)
T ss_dssp             CTTTTSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHH-HHHHHHHHHHHHTTSSSSCCEEEE-C--CG----GG
T ss_pred             CCCCCCCEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCcc-hHHHHHhhHHHHhhhcCCCeEEEc-C--cH----HH
Confidence            55556689999999 9999999999988774  8999998753 2211111111   1 111344442 2  22    34


Q ss_pred             hCCCCEEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCC-EEEEEe
Q 025755           75 TAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVK-RVVVVS  127 (248)
Q Consensus        75 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~-~iV~vS  127 (248)
                      ++++|+||.+++.......  .-.+.+..|..-...+++.+.+.... .++.+|
T Consensus        72 l~~aDvViia~~~~~~~g~--~r~dl~~~n~~i~~~i~~~i~~~~p~a~~iv~t  123 (316)
T 1ldn_A           72 CRDADLVVICAGANQKPGE--TRLDLVDKNIAIFRSIVESVMASGFQGLFLVAT  123 (316)
T ss_dssp             TTTCSEEEECCSCCCCTTT--CSGGGHHHHHHHHHHHHHHHHHHTCCSEEEECS
T ss_pred             hCCCCEEEEcCCCCCCCCC--CHHHHHHcChHHHHHHHHHHHHHCCCCEEEEeC
Confidence            7789999999987543322  22456788888888888888877433 444444

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=97.75  E-value=5.4e-05  Score=64.30  Aligned_cols=77  Identities=17%  Similarity=-0.007  Sum_probs=55.8

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEE
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVF   82 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi   82 (248)
                      .+.+++|+|+|+ |.||+.+++.+...|++|++++|+....  ...+...  ...+   ..+..+.+++.++++++|+||
T Consensus       165 ~l~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l--~~~~~~~--g~~~---~~~~~~~~~l~~~l~~aDvVi  236 (377)
T 2vhw_A          165 GVEPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKL--RQLDAEF--CGRI---HTRYSSAYELEGAVKRADLVI  236 (377)
T ss_dssp             TBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHH--HHHHHHT--TTSS---EEEECCHHHHHHHHHHCSEEE
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHH--HHHHHhc--CCee---EeccCCHHHHHHHHcCCCEEE
Confidence            367899999998 9999999999999999999999876321  1122111  1122   123445667778888899999


Q ss_pred             Ecccc
Q 025755           83 HVACP   87 (248)
Q Consensus        83 ~~ag~   87 (248)
                      ++++.
T Consensus       237 ~~~~~  241 (377)
T 2vhw_A          237 GAVLV  241 (377)
T ss_dssp             ECCCC
T ss_pred             ECCCc
Confidence            98874

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*

Probab=97.75  E-value=0.00034  Score=57.73  Aligned_cols=110  Identities=13%  Similarity=0.077  Sum_probs=70.1

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCCC-eEEEEEcCCCchhhHHhhhhcC------CCCCeEEEEccCCCHHHHHHHhCCCC
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKGY-MVHGTVRDPCDEKNAHLKKLEG------ASENLQLFKTDLLDYEALCAATAGCT   79 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~~Di~d~~~~~~~~~~id   79 (248)
                      ++|.|+|+ |.+|..++..|+..|+ +|++++++..... .....+..      ...++... .|      . +.++++|
T Consensus         3 ~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~~~~~-g~~~dl~~~~~~~~~~~~i~~t-~d------~-~a~~~aD   72 (309)
T 1ur5_A            3 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQ-GKALDLYEASPIEGFDVRVTGT-NN------Y-ADTANSD   72 (309)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSSSHHH-HHHHHHHTTHHHHTCCCCEEEE-SC------G-GGGTTCS
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCccHHH-HHHHhHHHhHhhcCCCeEEEEC-CC------H-HHHCCCC
Confidence            68999999 9999999999999997 9888888764322 11112211      11222221 22      2 3477899


Q ss_pred             EEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEec
Q 025755           80 GVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSS  128 (248)
Q Consensus        80 ~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS  128 (248)
                      +||.++|......  ..-.++...|+...+.+.+.+.+.....+|.+.|
T Consensus        73 ~Vi~a~g~p~~~g--~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~t  119 (309)
T 1ur5_A           73 VIVVTSGAPRKPG--MSREDLIKVNADITRACISQAAPLSPNAVIIMVN  119 (309)
T ss_dssp             EEEECCCC----------CHHHHHHHHHHHHHHHHHGGGCTTCEEEECC
T ss_pred             EEEEcCCCCCCCC--CCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEcC
Confidence            9999998644321  1113456888888889999998876555554443

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=97.73  E-value=5.7e-05  Score=63.25  Aligned_cols=98  Identities=15%  Similarity=0.136  Sum_probs=64.5

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCH---HHHHHHhC--CCC
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDY---EALCAATA--GCT   79 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~---~~~~~~~~--~id   79 (248)
                      .+++|+|+|++|++|..+++.+...|++|++++++..+  .+..+.+   ... .  ..|..+.   +.+.+...  ++|
T Consensus       166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~--~~~~~~~---ga~-~--~~d~~~~~~~~~~~~~~~~~~~d  237 (343)
T 2eih_A          166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDK--LRRAKAL---GAD-E--TVNYTHPDWPKEVRRLTGGKGAD  237 (343)
T ss_dssp             TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHH--HHHHHHH---TCS-E--EEETTSTTHHHHHHHHTTTTCEE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHhc---CCC-E--EEcCCcccHHHHHHHHhCCCCce
Confidence            47899999999999999999999999999999987532  2222222   112 1  2355543   23444442  689


Q ss_pred             EEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccc
Q 025755           80 GVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIG  130 (248)
Q Consensus        80 ~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~  130 (248)
                      +||+++| ...                 ....++.+++  .+++|.+++..
T Consensus       238 ~vi~~~g-~~~-----------------~~~~~~~l~~--~G~~v~~g~~~  268 (343)
T 2eih_A          238 KVVDHTG-ALY-----------------FEGVIKATAN--GGRIAIAGASS  268 (343)
T ss_dssp             EEEESSC-SSS-----------------HHHHHHHEEE--EEEEEESSCCC
T ss_pred             EEEECCC-HHH-----------------HHHHHHhhcc--CCEEEEEecCC
Confidence            9999998 211                 2234455544  35999987643

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=97.72  E-value=0.00044  Score=57.34  Aligned_cols=115  Identities=17%  Similarity=0.105  Sum_probs=75.6

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCC-eEEEEEcCCCchhh--HHhhhh---cCCCCCeEEEEccCCCHHHHHHHhCC
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGY-MVHGTVRDPCDEKN--AHLKKL---EGASENLQLFKTDLLDYEALCAATAG   77 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~--~~~~~~---~~~~~~~~~~~~Di~d~~~~~~~~~~   77 (248)
                      |++++|.|+|+ |.+|..++..|+..|+ +|++++++......  ..+...   .....++.. ..|   .    +.+++
T Consensus         5 m~~~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~-t~d---~----~a~~~   75 (324)
T 3gvi_A            5 MARNKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTG-AND---Y----AAIEG   75 (324)
T ss_dssp             -CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEE-ESS---G----GGGTT
T ss_pred             CcCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEE-eCC---H----HHHCC
Confidence            56789999998 9999999999999998 99999998753321  111111   111223322 122   2    46788


Q ss_pred             CCEEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCC-CEEEEEecc
Q 025755           78 CTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKV-KRVVVVSSI  129 (248)
Q Consensus        78 id~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~-~~iV~vSS~  129 (248)
                      +|+||.++|......  ..-.+.+..|..-.+.+++.+.+... ..++.+|-.
T Consensus        76 aDiVIiaag~p~k~G--~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvtNP  126 (324)
T 3gvi_A           76 ADVVIVTAGVPRKPG--MSRDDLLGINLKVMEQVGAGIKKYAPEAFVICITNP  126 (324)
T ss_dssp             CSEEEECCSCCCC-------CHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSS
T ss_pred             CCEEEEccCcCCCCC--CCHHHHHHhhHHHHHHHHHHHHHHCCCeEEEecCCC
Confidence            999999998643221  12245778899999999999888743 466666653

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=97.72  E-value=8e-05  Score=61.23  Aligned_cols=38  Identities=26%  Similarity=0.202  Sum_probs=32.1

Q ss_pred             CCCcE-EEEEcC-c-----------------cHHHHHHHHHHHHCCCeEEEEEcCCC
Q 025755            4 EDKER-VCVTGA-G-----------------GYIASWLVKYLLLKGYMVHGTVRDPC   41 (248)
Q Consensus         4 l~~k~-vlVtG~-~-----------------g~iG~~~~~~l~~~g~~V~~~~r~~~   41 (248)
                      +.||+ ||||+| |                 |-.|.++|+.++++|++|+.+.+...
T Consensus        34 l~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~s   90 (313)
T 1p9o_A           34 AQGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRARS   90 (313)
T ss_dssp             HTTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETTS
T ss_pred             hcCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCCC
Confidence            46777 999975 4                 67999999999999999999988543

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=97.71  E-value=0.00014  Score=60.84  Aligned_cols=76  Identities=21%  Similarity=0.168  Sum_probs=52.1

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCC-HHHHHHHhC--CCCEE
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLD-YEALCAATA--GCTGV   81 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d-~~~~~~~~~--~id~v   81 (248)
                      .+++|+|+|++|+||..+++.+...|++|++++++..+.  ...+.+.   .+ ..+..+ .+ .+.+.+...  ++|+|
T Consensus       159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~--~~~~~~g---a~-~v~~~~-~~~~~~v~~~~~~~g~Dvv  231 (342)
T 4eye_A          159 AGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAAT--EFVKSVG---AD-IVLPLE-EGWAKAVREATGGAGVDMV  231 (342)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGH--HHHHHHT---CS-EEEESS-TTHHHHHHHHTTTSCEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHH--HHHHhcC---Cc-EEecCc-hhHHHHHHHHhCCCCceEE
Confidence            478999999999999999999999999999999876432  2333321   12 223233 22 233444443  58999


Q ss_pred             EEcccc
Q 025755           82 FHVACP   87 (248)
Q Consensus        82 i~~ag~   87 (248)
                      |+++|.
T Consensus       232 id~~g~  237 (342)
T 4eye_A          232 VDPIGG  237 (342)
T ss_dssp             EESCC-
T ss_pred             EECCch
Confidence            999984

>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}

Probab=97.71  E-value=0.00016  Score=60.45  Aligned_cols=117  Identities=20%  Similarity=0.071  Sum_probs=75.1

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCC-------eEEEEEcCCCchh-h---HHhhhhcCCCCC-eEEEEccCCCHHHH
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGY-------MVHGTVRDPCDEK-N---AHLKKLEGASEN-LQLFKTDLLDYEAL   71 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~-------~V~~~~r~~~~~~-~---~~~~~~~~~~~~-~~~~~~Di~d~~~~   71 (248)
                      ++..||.|+||+|+||+.++-.|+....       ++.+++....... +   ..+...  ..+. ...+..+     +.
T Consensus        22 ~~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~--~~~~~~~~~~~~-----~~   94 (345)
T 4h7p_A           22 MSAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDC--AFPLLDKVVVTA-----DP   94 (345)
T ss_dssp             CCCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHT--TCTTEEEEEEES-----CH
T ss_pred             CCCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhc--CccCCCcEEEcC-----Ch
Confidence            4456999999999999999998887542       6778876542111 1   111111  1111 1222221     23


Q ss_pred             HHHhCCCCEEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcC-C-CEEEEEecc
Q 025755           72 CAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAK-V-KRVVVVSSI  129 (248)
Q Consensus        72 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~-~-~~iV~vSS~  129 (248)
                      ...+++.|+||-.||......  ..=.++++.|..-.+.+.+.+.+.. . ..++.+|-.
T Consensus        95 ~~a~~~advVvi~aG~prkpG--mtR~DLl~~Na~I~~~~~~~i~~~a~~~~~vlvvsNP  152 (345)
T 4h7p_A           95 RVAFDGVAIAIMCGAFPRKAG--MERKDLLEMNARIFKEQGEAIAAVAASDCRVVVVGNP  152 (345)
T ss_dssp             HHHTTTCSEEEECCCCCCCTT--CCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSS
T ss_pred             HHHhCCCCEEEECCCCCCCCC--CCHHHHHHHhHHHHHHHHHHHHhhccCceEEEEeCCC
Confidence            467899999999999755432  2225788999999999999988763 2 355666643

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=97.70  E-value=1.7e-05  Score=61.71  Aligned_cols=73  Identities=15%  Similarity=0.070  Sum_probs=47.2

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEEccc
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFHVAC   86 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~~ag   86 (248)
                      ++|+|+||+|.+|+.+++.|++.|++|++++|+.+... ...+.....-.     ..|+. .+++..+++++|+||++..
T Consensus         1 m~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~-----~~~~~-~~~~~~~~~~~D~Vi~~~~   73 (212)
T 1jay_A            1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAE-AKAAEYRRIAG-----DASIT-GMKNEDAAEACDIAVLTIP   73 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHH-HHHHHHHHHHS-----SCCEE-EEEHHHHHHHCSEEEECSC
T ss_pred             CeEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHhccccc-----cCCCC-hhhHHHHHhcCCEEEEeCC
Confidence            37999999999999999999999999999998753221 11111100000     01121 1234455667899999874

>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*

Probab=97.70  E-value=0.00039  Score=57.58  Aligned_cols=117  Identities=13%  Similarity=0.097  Sum_probs=74.0

Q ss_pred             CCCCCCcEEEEEcCccHHHHHHHHHHHHCCC--eEEEEEcCCCchhh--HHhhhhcCC-CCCeEEEEccCCCHHHHHHHh
Q 025755            1 MSGEDKERVCVTGAGGYIASWLVKYLLLKGY--MVHGTVRDPCDEKN--AHLKKLEGA-SENLQLFKTDLLDYEALCAAT   75 (248)
Q Consensus         1 m~~l~~k~vlVtG~~g~iG~~~~~~l~~~g~--~V~~~~r~~~~~~~--~~~~~~~~~-~~~~~~~~~Di~d~~~~~~~~   75 (248)
                      |..+++++|.|+|+ |.+|..++..|+.+|.  +|.+++++......  ..+...... ...+.+.. |  +    ...+
T Consensus         1 m~~m~~~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~-~--~----~~a~   72 (317)
T 3d0o_A            1 MNKFKGNKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVKA-G--E----YSDC   72 (317)
T ss_dssp             ---CCCCEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEEE-C--C----GGGG
T ss_pred             CCCCCCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEEe-C--C----HHHh
Confidence            54566679999999 9999999999998884  89998887532211  111111111 12334333 2  2    3447


Q ss_pred             CCCCEEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCC-CEEEEEe
Q 025755           76 AGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKV-KRVVVVS  127 (248)
Q Consensus        76 ~~id~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~-~~iV~vS  127 (248)
                      +++|+||..+|.....  ...-.+++..|+.-...+.+.+.+... ..+|.+|
T Consensus        73 ~~aDvVvi~ag~~~~~--g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~t  123 (317)
T 3d0o_A           73 HDADLVVICAGAAQKP--GETRLDLVSKNLKIFKSIVGEVMASKFDGIFLVAT  123 (317)
T ss_dssp             TTCSEEEECCCCCCCT--TCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             CCCCEEEECCCCCCCC--CCcHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEec
Confidence            8999999999874322  122235678888888899998888744 3555544

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=97.68  E-value=0.00065  Score=56.50  Aligned_cols=117  Identities=17%  Similarity=0.125  Sum_probs=77.3

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCC--eEEEEEcCCCchhh--HHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCC
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGY--MVHGTVRDPCDEKN--AHLKKLEGASENLQLFKTDLLDYEALCAATAGCT   79 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~--~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id   79 (248)
                      ..+++|.|+|+ |.+|..++..|+..|.  +|++++++.....-  ..+............+..+  |.+    .++++|
T Consensus        17 ~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~~--d~~----~~~~aD   89 (331)
T 4aj2_A           17 VPQNKITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSSK--DYS----VTANSK   89 (331)
T ss_dssp             CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEECS--SGG----GGTTEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEcC--CHH----HhCCCC
Confidence            35689999997 9999999999999987  89999987532211  1122111111122222221  222    478899


Q ss_pred             EEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCC-CEEEEEecc
Q 025755           80 GVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKV-KRVVVVSSI  129 (248)
Q Consensus        80 ~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~-~~iV~vSS~  129 (248)
                      +||.+||.....  ...-.+.++.|..-.+.+.+.+.+... ..++.+|-.
T Consensus        90 iVvi~aG~~~kp--G~tR~dL~~~N~~I~~~i~~~i~~~~p~a~vlvvtNP  138 (331)
T 4aj2_A           90 LVIITAGARQQE--GESRLNLVQRNVNIFKFIIPNVVKYSPQCKLLIVSNP  138 (331)
T ss_dssp             EEEECCSCCCCT--TCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECSSS
T ss_pred             EEEEccCCCCCC--CccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCh
Confidence            999999975432  222257889999999999999988743 466666653

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=97.66  E-value=0.00013  Score=59.94  Aligned_cols=74  Identities=19%  Similarity=0.127  Sum_probs=51.2

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEEc
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFHV   84 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~~   84 (248)
                      .+++|+|+|++|++|..+++.+...|++|++++++..+.  +..+.+   ... .  ..|..+.+++.+.++++|+||+ 
T Consensus       125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~--~~~~~~---ga~-~--~~~~~~~~~~~~~~~~~d~vid-  195 (302)
T 1iz0_A          125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKL--ALPLAL---GAE-E--AATYAEVPERAKAWGGLDLVLE-  195 (302)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGS--HHHHHT---TCS-E--EEEGGGHHHHHHHTTSEEEEEE-
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH--HHHHhc---CCC-E--EEECCcchhHHHHhcCceEEEE-
Confidence            478999999999999999999999999999999876422  222222   111 1  1354441233333478999999 


Q ss_pred             ccc
Q 025755           85 ACP   87 (248)
Q Consensus        85 ag~   87 (248)
                      +|.
T Consensus       196 ~g~  198 (302)
T 1iz0_A          196 VRG  198 (302)
T ss_dssp             CSC
T ss_pred             CCH
Confidence            874

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=97.65  E-value=0.00018  Score=58.21  Aligned_cols=73  Identities=21%  Similarity=0.113  Sum_probs=49.9

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCC-eEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEE
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGY-MVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVF   82 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi   82 (248)
                      +++|+++|+|+ |++|++++..|++.|. +|++++|+.++ .....+.+..  ..+...  +..   ++..  .+.|+||
T Consensus       118 l~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~-a~~la~~~~~--~~~~~~--~~~---~l~~--~~~DivI  186 (272)
T 3pwz_A          118 LRNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAK-ALALRNELDH--SRLRIS--RYE---ALEG--QSFDIVV  186 (272)
T ss_dssp             CTTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHH-HHHHHHHHCC--TTEEEE--CSG---GGTT--CCCSEEE
T ss_pred             ccCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHH-HHHHHHHhcc--CCeeEe--eHH---Hhcc--cCCCEEE
Confidence            67899999997 7999999999999996 99999998642 2222233322  234333  222   2221  6789999


Q ss_pred             Ecccc
Q 025755           83 HVACP   87 (248)
Q Consensus        83 ~~ag~   87 (248)
                      |+...
T Consensus       187 naTp~  191 (272)
T 3pwz_A          187 NATSA  191 (272)
T ss_dssp             ECSSG
T ss_pred             ECCCC
Confidence            99654

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.64  E-value=2.4e-05  Score=57.03  Aligned_cols=71  Identities=15%  Similarity=0.194  Sum_probs=49.3

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEEcc
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFHVA   85 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~~a   85 (248)
                      +++++|.|+ |.+|+.+++.|.+.|++|++++|+.... ....+.+.     ....  +.   +++..+++++|+||.+.
T Consensus        21 ~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~-~~~a~~~~-----~~~~--~~---~~~~~~~~~~Divi~at   88 (144)
T 3oj0_A           21 GNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHV-RAFAEKYE-----YEYV--LI---NDIDSLIKNNDVIITAT   88 (144)
T ss_dssp             CCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHH-HHHHHHHT-----CEEE--EC---SCHHHHHHTCSEEEECS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHH-HHHHHHhC-----CceE--ee---cCHHHHhcCCCEEEEeC
Confidence            789999996 9999999999999999999999886422 12222221     1211  12   23455667899999987


Q ss_pred             ccC
Q 025755           86 CPV   88 (248)
Q Consensus        86 g~~   88 (248)
                      +..
T Consensus        89 ~~~   91 (144)
T 3oj0_A           89 SSK   91 (144)
T ss_dssp             CCS
T ss_pred             CCC
Confidence            643

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=97.64  E-value=3.7e-05  Score=62.41  Aligned_cols=70  Identities=9%  Similarity=-0.000  Sum_probs=51.1

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCC-eEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEE
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGY-MVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVF   82 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi   82 (248)
                      +++|+++|+|+ |++|++++..|++.|+ +|++++|+.++..     .+.   ..+..     ...+++..++++.|+||
T Consensus       115 l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~-----~la---~~~~~-----~~~~~~~~~~~~aDiVI  180 (277)
T 3don_A          115 IEDAYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFN-----NWS---LNINK-----INLSHAESHLDEFDIII  180 (277)
T ss_dssp             GGGCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGT-----TCC---SCCEE-----ECHHHHHHTGGGCSEEE
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHH-----HHH---Hhccc-----ccHhhHHHHhcCCCEEE
Confidence            56899999997 7999999999999998 8999999864211     111   11221     23456777778899999


Q ss_pred             Ecccc
Q 025755           83 HVACP   87 (248)
Q Consensus        83 ~~ag~   87 (248)
                      ++...
T Consensus       181 naTp~  185 (277)
T 3don_A          181 NTTPA  185 (277)
T ss_dssp             ECCC-
T ss_pred             ECccC
Confidence            98654

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=97.63  E-value=0.00061  Score=56.47  Aligned_cols=115  Identities=14%  Similarity=0.059  Sum_probs=75.6

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCC-eEEEEEcCCCchhhHHhhhhcCC----CCCeEEEEccCCCHHHHHHHhCCC
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGY-MVHGTVRDPCDEKNAHLKKLEGA----SENLQLFKTDLLDYEALCAATAGC   78 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~~Di~d~~~~~~~~~~i   78 (248)
                      |++++|.|+| +|.+|..++..|+..|. +|++++++...... ....+...    .....+...  .|.    +.++++
T Consensus         3 m~~~kI~iiG-aG~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g-~a~dL~~~~~~~~~~~~v~~t--~d~----~a~~~a   74 (321)
T 3p7m_A            3 MARKKITLVG-AGNIGGTLAHLALIKQLGDVVLFDIAQGMPNG-KALDLLQTCPIEGVDFKVRGT--NDY----KDLENS   74 (321)
T ss_dssp             CCCCEEEEEC-CSHHHHHHHHHHHHTTCCEEEEECSSSSHHHH-HHHHHHTTHHHHTCCCCEEEE--SCG----GGGTTC
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHhCCCceEEEEeCChHHHHH-HHHHHHhhhhhcCCCcEEEEc--CCH----HHHCCC
Confidence            4567999999 49999999999999887 99999998753221 11111110    112222211  122    467889


Q ss_pred             CEEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCC-CEEEEEec
Q 025755           79 TGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKV-KRVVVVSS  128 (248)
Q Consensus        79 d~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~-~~iV~vSS  128 (248)
                      |+||.++|......  ..-.+.+..|......+++.+.+... ..++.+|-
T Consensus        75 DvVIi~ag~p~k~G--~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvtN  123 (321)
T 3p7m_A           75 DVVIVTAGVPRKPG--MSRDDLLGINIKVMQTVGEGIKHNCPNAFVICITN  123 (321)
T ss_dssp             SEEEECCSCCCCTT--CCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred             CEEEEcCCcCCCCC--CCHHHHHHHhHHHHHHHHHHHHHHCCCcEEEEecC
Confidence            99999998643221  22245778899999999999988753 46666654

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=97.62  E-value=0.00022  Score=57.97  Aligned_cols=74  Identities=15%  Similarity=0.071  Sum_probs=50.2

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCC-eEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEE
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGY-MVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVF   82 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi   82 (248)
                      +++|+++|+|+ |++|++++..|++.|+ +|++++|+.++ .....+.+... ..+.....     +++   .++.|+||
T Consensus       124 l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~-a~~la~~~~~~-~~~~~~~~-----~~l---~~~aDiII  192 (281)
T 3o8q_A          124 LKGATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAK-AEQLAELVAAY-GEVKAQAF-----EQL---KQSYDVII  192 (281)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHH-HHHHHHHHGGG-SCEEEEEG-----GGC---CSCEEEEE
T ss_pred             ccCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHH-HHHHHHHhhcc-CCeeEeeH-----HHh---cCCCCEEE
Confidence            67899999998 7899999999999996 99999998643 22222323221 23443322     111   15789999


Q ss_pred             EccccC
Q 025755           83 HVACPV   88 (248)
Q Consensus        83 ~~ag~~   88 (248)
                      ++....
T Consensus       193 naTp~g  198 (281)
T 3o8q_A          193 NSTSAS  198 (281)
T ss_dssp             ECSCCC
T ss_pred             EcCcCC
Confidence            987543

>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1

Probab=97.61  E-value=0.00053  Score=56.81  Aligned_cols=111  Identities=15%  Similarity=0.142  Sum_probs=69.7

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCC--eEEEEEcCCCchhhHHhhhhcC---CCCCeEEEEccCCCHHHHHHHhCCCCE
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGY--MVHGTVRDPCDEKNAHLKKLEG---ASENLQLFKTDLLDYEALCAATAGCTG   80 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~~Di~d~~~~~~~~~~id~   80 (248)
                      +++|.|+|+ |.+|..++..|+..|.  +|++++.+..... .....+..   ...++.+..   .+    ...++++|+
T Consensus         7 ~~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~-g~~~dl~~~~~~~~~~~i~~---~~----~~a~~~aDv   77 (318)
T 1y6j_A            7 RSKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAI-GEAMDINHGLPFMGQMSLYA---GD----YSDVKDCDV   77 (318)
T ss_dssp             CCCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CC-HHHHHHTTSCCCTTCEEEC-----C----GGGGTTCSE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHHH-HHHHHHHHhHHhcCCeEEEE---CC----HHHhCCCCE
Confidence            468999998 9999999999999987  8999998764322 11122211   112333322   12    334789999


Q ss_pred             EEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCC-CEEEEEe
Q 025755           81 VFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKV-KRVVVVS  127 (248)
Q Consensus        81 vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~-~~iV~vS  127 (248)
                      ||.+++.....  ...-.+++..|+.....+++.+.+... ..+|.+|
T Consensus        78 Vii~~g~p~k~--g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~t  123 (318)
T 1y6j_A           78 IVVTAGANRKP--GETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVVS  123 (318)
T ss_dssp             EEECCCC--------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEECS
T ss_pred             EEEcCCCCCCC--CcCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEEec
Confidence            99999864321  112245678898888999999988643 3455543

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=97.60  E-value=0.00012  Score=61.78  Aligned_cols=98  Identities=19%  Similarity=0.193  Sum_probs=62.7

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCH---HHHHHHh-CCCCE
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDY---EALCAAT-AGCTG   80 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~---~~~~~~~-~~id~   80 (248)
                      .+++|+|+||+|+||..+++.+...|++|++++++.+  ..+..+.+   ..+ ..+  |..+.   +.+.+.. .++|+
T Consensus       163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~--~~~~~~~~---Ga~-~~~--~~~~~~~~~~~~~~~~~g~D~  234 (362)
T 2c0c_A          163 EGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDE--KSAFLKSL---GCD-RPI--NYKTEPVGTVLKQEYPEGVDV  234 (362)
T ss_dssp             TTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHH--HHHHHHHT---TCS-EEE--ETTTSCHHHHHHHHCTTCEEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHH--HHHHHHHc---CCc-EEE--ecCChhHHHHHHHhcCCCCCE
Confidence            4789999999999999999999999999999998753  22222222   112 122  33322   2233332 36899


Q ss_pred             EEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccc
Q 025755           81 VFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIG  130 (248)
Q Consensus        81 vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~  130 (248)
                      ||+++|..                  .....++.+++.  +++|.+++..
T Consensus       235 vid~~g~~------------------~~~~~~~~l~~~--G~iv~~g~~~  264 (362)
T 2c0c_A          235 VYESVGGA------------------MFDLAVDALATK--GRLIVIGFIS  264 (362)
T ss_dssp             EEECSCTH------------------HHHHHHHHEEEE--EEEEECCCGG
T ss_pred             EEECCCHH------------------HHHHHHHHHhcC--CEEEEEeCCC
Confidence            99998720                  122344555443  5999998744

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=97.56  E-value=0.00035  Score=58.97  Aligned_cols=99  Identities=16%  Similarity=0.178  Sum_probs=66.9

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEEc
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFHV   84 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~~   84 (248)
                      .+++|+|+|+ |+||..+++.+...|++|++++++..+. ....+.+   ..+ .  ..|..+.+.+.++..++|+||++
T Consensus       187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~-~~~~~~l---Ga~-~--v~~~~~~~~~~~~~~~~D~vid~  258 (366)
T 1yqd_A          187 PGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKK-EEALKNF---GAD-S--FLVSRDQEQMQAAAGTLDGIIDT  258 (366)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGH-HHHHHTS---CCS-E--EEETTCHHHHHHTTTCEEEEEEC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHhc---CCc-e--EEeccCHHHHHHhhCCCCEEEEC
Confidence            5789999996 9999999999999999999999876422 1111122   112 1  24666777777777789999999


Q ss_pred             cccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccc
Q 025755           85 ACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIG  130 (248)
Q Consensus        85 ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~  130 (248)
                      +|....                 ....++.+++  .+++|.+++..
T Consensus       259 ~g~~~~-----------------~~~~~~~l~~--~G~iv~~g~~~  285 (366)
T 1yqd_A          259 VSAVHP-----------------LLPLFGLLKS--HGKLILVGAPE  285 (366)
T ss_dssp             CSSCCC-----------------SHHHHHHEEE--EEEEEECCCCS
T ss_pred             CCcHHH-----------------HHHHHHHHhc--CCEEEEEccCC
Confidence            975321                 1123444443  35899998643

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=97.54  E-value=0.00014  Score=62.44  Aligned_cols=73  Identities=21%  Similarity=0.203  Sum_probs=57.6

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHH-hCCCCEEEEc
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAA-TAGCTGVFHV   84 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~-~~~id~vi~~   84 (248)
                      +++|+|.|. |.+|+.+++.|.+.|++|++++++....  ....     ...+.++.+|.++.+.++++ ++++|.||-+
T Consensus         4 ~~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~v--~~~~-----~~g~~vi~GDat~~~~L~~agi~~A~~viv~   75 (413)
T 3l9w_A            4 GMRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDHI--ETLR-----KFGMKVFYGDATRMDLLESAGAAKAEVLINA   75 (413)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHHH--HHHH-----HTTCCCEESCTTCHHHHHHTTTTTCSEEEEC
T ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHH--HHHH-----hCCCeEEEcCCCCHHHHHhcCCCccCEEEEC
Confidence            457999996 8899999999999999999999986421  1111     12467889999999999887 6788988876


Q ss_pred             cc
Q 025755           85 AC   86 (248)
Q Consensus        85 ag   86 (248)
                      .+
T Consensus        76 ~~   77 (413)
T 3l9w_A           76 ID   77 (413)
T ss_dssp             CS
T ss_pred             CC
Confidence            64

>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*

Probab=97.53  E-value=0.00083  Score=55.40  Aligned_cols=116  Identities=16%  Similarity=0.043  Sum_probs=74.8

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHC-C--CeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEE
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLK-G--YMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFH   83 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~-g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~   83 (248)
                      +||.|+||+|.+|..++..|..+ +  .++++++.+. ... .....+............ ..  ......++++|+||-
T Consensus         1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~-~~~-G~a~Dl~~~~~~~~v~~~-~~--~~~~~~~~~aDivii   75 (312)
T 3hhp_A            1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTP-GVAVDLSHIPTAVKIKGF-SG--EDATPALEGADVVLI   75 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST-THH-HHHHHHHTSCSSEEEEEE-CS--SCCHHHHTTCSEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC-Cch-hHHHHhhCCCCCceEEEe-cC--CCcHHHhCCCCEEEE
Confidence            48999999999999999999875 5  4788888875 211 111222222122222211 01  112355788999999


Q ss_pred             ccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCC-CEEEEEecc
Q 025755           84 VACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKV-KRVVVVSSI  129 (248)
Q Consensus        84 ~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~-~~iV~vSS~  129 (248)
                      .||.....  ...-.+.++.|..-.+.+.+.+.+... ..++.+|-.
T Consensus        76 ~ag~~rkp--G~~R~dll~~N~~I~~~i~~~i~~~~p~a~vlvvtNP  120 (312)
T 3hhp_A           76 SAGVARKP--GMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIITNP  120 (312)
T ss_dssp             CCSCSCCT--TCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECSSC
T ss_pred             eCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEecCc
Confidence            99864432  122257889999999999999988743 467776643

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=97.53  E-value=0.00028  Score=59.14  Aligned_cols=97  Identities=12%  Similarity=0.098  Sum_probs=62.3

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCH---HHHHHHh--CCCCE
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDY---EALCAAT--AGCTG   80 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~---~~~~~~~--~~id~   80 (248)
                      +++++|+||+|+||..+++.+...|++|++++++..+  .+..+.+.   .+ ..  .|..+.   +.+.++.  .++|+
T Consensus       165 ~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~--~~~~~~~G---a~-~~--~~~~~~~~~~~v~~~~~~~g~D~  236 (349)
T 3pi7_A          165 EKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQ--IALLKDIG---AA-HV--LNEKAPDFEATLREVMKAEQPRI  236 (349)
T ss_dssp             CSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGG--HHHHHHHT---CS-EE--EETTSTTHHHHHHHHHHHHCCCE
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHHcC---CC-EE--EECCcHHHHHHHHHHhcCCCCcE
Confidence            3799999999999999999999999999999987643  22223221   12 12  233332   2344433  27999


Q ss_pred             EEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccc
Q 025755           81 VFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIG  130 (248)
Q Consensus        81 vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~  130 (248)
                      ||+++|..                  .....++.+++  .+++|.+++..
T Consensus       237 vid~~g~~------------------~~~~~~~~l~~--~G~iv~~G~~~  266 (349)
T 3pi7_A          237 FLDAVTGP------------------LASAIFNAMPK--RARWIIYGRLD  266 (349)
T ss_dssp             EEESSCHH------------------HHHHHHHHSCT--TCEEEECCCSC
T ss_pred             EEECCCCh------------------hHHHHHhhhcC--CCEEEEEeccC
Confidence            99999741                  01234444443  36999987643

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=97.51  E-value=0.00079  Score=55.05  Aligned_cols=114  Identities=13%  Similarity=0.028  Sum_probs=75.2

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCCC--eEEEEEcCCCchh--hHHhhhhcC-CCCCeEEEEccCCCHHHHHHHhCCCCEE
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKGY--MVHGTVRDPCDEK--NAHLKKLEG-ASENLQLFKTDLLDYEALCAATAGCTGV   81 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g~--~V~~~~r~~~~~~--~~~~~~~~~-~~~~~~~~~~Di~d~~~~~~~~~~id~v   81 (248)
                      |+|.|+|+ |.+|..++..|+..|+  +|++++++.....  ...+..... ......+...  .|    .+.+++.|+|
T Consensus         1 MkI~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d----~~a~~~aDiV   73 (294)
T 1oju_A            1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--AD----YSLLKGSEII   73 (294)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEE--SC----GGGGTTCSEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEe--CC----HHHhCCCCEE
Confidence            47999999 9999999999999887  8999999864322  111111111 1112222221  12    3467889999


Q ss_pred             EEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCC-CEEEEEecc
Q 025755           82 FHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKV-KRVVVVSSI  129 (248)
Q Consensus        82 i~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~-~~iV~vSS~  129 (248)
                      |.+||.....  ...-.++++.|..-.+.+.+.+.+... ..++.+|-.
T Consensus        74 Viaag~~~kp--G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvsNP  120 (294)
T 1oju_A           74 VVTAGLARKP--GMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTNP  120 (294)
T ss_dssp             EECCCCCCCS--SCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSSS
T ss_pred             EECCCCCCCC--CCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeCCc
Confidence            9999864322  122246788899989999999988843 466666643

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=97.51  E-value=0.00015  Score=61.14  Aligned_cols=73  Identities=14%  Similarity=0.202  Sum_probs=50.2

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCC---CchhhHHhhhhcCCCCCeEEEEccCCC--HHHHHHHhCCC
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDP---CDEKNAHLKKLEGASENLQLFKTDLLD--YEALCAATAGC   78 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~---~~~~~~~~~~~~~~~~~~~~~~~Di~d--~~~~~~~~~~i   78 (248)
                      +++++|+|+|+ |+||..+++.+...|++|++++++.   ++  .+..+.+.     ...+  | .+  .+.+.+.-.++
T Consensus       179 ~~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~--~~~~~~~g-----a~~v--~-~~~~~~~~~~~~~~~  247 (366)
T 2cdc_A          179 LNCRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVE--QTVIEETK-----TNYY--N-SSNGYDKLKDSVGKF  247 (366)
T ss_dssp             STTCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHH--HHHHHHHT-----CEEE--E-CTTCSHHHHHHHCCE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHH--HHHHHHhC-----Ccee--c-hHHHHHHHHHhCCCC
Confidence            34899999999 9999999999998999999999876   32  12222221     2222  4 33  22333322579


Q ss_pred             CEEEEcccc
Q 025755           79 TGVFHVACP   87 (248)
Q Consensus        79 d~vi~~ag~   87 (248)
                      |+||+++|.
T Consensus       248 d~vid~~g~  256 (366)
T 2cdc_A          248 DVIIDATGA  256 (366)
T ss_dssp             EEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999974

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=97.48  E-value=0.00024  Score=56.81  Aligned_cols=80  Identities=18%  Similarity=0.113  Sum_probs=54.3

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCC-eEEEEEcCCCc------------------hhhHHhhhhcCCCCC--eEEEE
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGY-MVHGTVRDPCD------------------EKNAHLKKLEGASEN--LQLFK   62 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~-~V~~~~r~~~~------------------~~~~~~~~~~~~~~~--~~~~~   62 (248)
                      +++++|+|.|+ |++|+.+++.|++.|. ++++++++.-+                  ......+.+....+.  +..+.
T Consensus        29 l~~~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~  107 (249)
T 1jw9_B           29 LKDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVN  107 (249)
T ss_dssp             HHHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEC
T ss_pred             HhCCeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEe
Confidence            45689999986 6899999999999996 89999887611                  111111222222233  44555


Q ss_pred             ccCCCHHHHHHHhCCCCEEEEcc
Q 025755           63 TDLLDYEALCAATAGCTGVFHVA   85 (248)
Q Consensus        63 ~Di~d~~~~~~~~~~id~vi~~a   85 (248)
                      .++. .+.+..++++.|+||.+.
T Consensus       108 ~~~~-~~~~~~~~~~~DvVi~~~  129 (249)
T 1jw9_B          108 ALLD-DAELAALIAEHDLVLDCT  129 (249)
T ss_dssp             SCCC-HHHHHHHHHTSSEEEECC
T ss_pred             ccCC-HhHHHHHHhCCCEEEEeC
Confidence            5565 356677788999999876

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}

Probab=97.45  E-value=0.0011  Score=54.57  Aligned_cols=111  Identities=18%  Similarity=0.194  Sum_probs=67.2

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCCC--eEEEEEcCCCchhhHHhhhhcCC---CCCeEEEEccCCCHHHHHHHhCCCCEE
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKGY--MVHGTVRDPCDEKNAHLKKLEGA---SENLQLFKTDLLDYEALCAATAGCTGV   81 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~Di~d~~~~~~~~~~id~v   81 (248)
                      ++|.|+|+ |.+|..++..|+..|+  +|++++++..... .....+...   .....+...   +.    ..++++|+|
T Consensus         1 mkI~VIGa-G~vG~~la~~la~~g~~~eV~L~D~~~~~~~-~~~~~l~~~~~~~~~~~i~~~---~~----~a~~~aDvV   71 (304)
T 2v6b_A            1 MKVGVVGT-GFVGSTAAFALVLRGSCSELVLVDRDEDRAQ-AEAEDIAHAAPVSHGTRVWHG---GH----SELADAQVV   71 (304)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHH-HHHHHHTTSCCTTSCCEEEEE---CG----GGGTTCSEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCHHHHH-HHHHhhhhhhhhcCCeEEEEC---CH----HHhCCCCEE
Confidence            48999998 9999999999999998  9999998753221 111112111   112233221   22    347789999


Q ss_pred             EEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCC-EEEEEec
Q 025755           82 FHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVK-RVVVVSS  128 (248)
Q Consensus        82 i~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~-~iV~vSS  128 (248)
                      |.+++......  ..-.+++..|+.....+++.+.+.... .+|.+|-
T Consensus        72 Ii~~~~~~~~g--~~r~dl~~~n~~i~~~i~~~i~~~~p~~~vi~~tN  117 (304)
T 2v6b_A           72 ILTAGANQKPG--ESRLDLLEKNADIFRELVPQITRAAPDAVLLVTSN  117 (304)
T ss_dssp             EECC--------------CHHHHHHHHHHHHHHHHHHCSSSEEEECSS
T ss_pred             EEcCCCCCCCC--CcHHHHHHhHHHHHHHHHHHHHHhCCCeEEEEecC
Confidence            99997643221  122456788988888998888876433 4455443

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=97.40  E-value=0.00034  Score=60.67  Aligned_cols=36  Identities=19%  Similarity=0.308  Sum_probs=32.9

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCC
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDP   40 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~   40 (248)
                      .+++|+|+|++|+||..+++.+...|++|++++++.
T Consensus       220 ~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~  255 (447)
T 4a0s_A          220 QGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSA  255 (447)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCH
Confidence            478999999999999999999999999999998764

>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1

Probab=97.40  E-value=0.0014  Score=54.16  Aligned_cols=114  Identities=11%  Similarity=0.099  Sum_probs=71.6

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCC--eEEEEEcCCCchhh--HHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEE
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGY--MVHGTVRDPCDEKN--AHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGV   81 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~--~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~v   81 (248)
                      .+||.|+|+ |.+|..++..|+..+.  ++++++++......  ..+.........+.+.. |  +    ...++++|+|
T Consensus         5 ~~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~~-~--~----~~a~~~aDvV   76 (318)
T 1ez4_A            5 HQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYS-G--E----YSDCKDADLV   76 (318)
T ss_dssp             BCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEE-C--C----GGGGTTCSEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEEE-C--C----HHHhCCCCEE
Confidence            369999998 9999999999998875  89999986532211  11111111113344433 2  2    3447899999


Q ss_pred             EEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCC-CEEEEEecc
Q 025755           82 FHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKV-KRVVVVSSI  129 (248)
Q Consensus        82 i~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~-~~iV~vSS~  129 (248)
                      |..+|......  ..-.+++..|+.....+.+.+.+... ..+|.+|-.
T Consensus        77 ii~ag~~~~~g--~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNP  123 (318)
T 1ez4_A           77 VITAGAPQKPG--ESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAANP  123 (318)
T ss_dssp             EECCCC------------CHHHHHHHHHHHHHHHHHTTCCSEEEECSSS
T ss_pred             EECCCCCCCCC--CCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeCCc
Confidence            99998643221  11245778899999999999988743 466666543

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=97.39  E-value=0.0003  Score=58.70  Aligned_cols=97  Identities=19%  Similarity=0.138  Sum_probs=62.4

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCH---HHHHHHhCCCCEE
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDY---EALCAATAGCTGV   81 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~---~~~~~~~~~id~v   81 (248)
                      .+++|+|+|+ |++|..+++.+...|++|++++++..+  .+..+.+   ..+ .  ..|..+.   +.+.++..++|+|
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~--~~~~~~l---Ga~-~--~~d~~~~~~~~~~~~~~~~~d~v  234 (339)
T 1rjw_A          164 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEK--LELAKEL---GAD-L--VVNPLKEDAAKFMKEKVGGVHAA  234 (339)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHH--HHHHHHT---TCS-E--EECTTTSCHHHHHHHHHSSEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHH--HHHHHHC---CCC-E--EecCCCccHHHHHHHHhCCCCEE
Confidence            4789999999 779999999999999999999987532  2222222   111 1  2355432   2344434579999


Q ss_pred             EEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEecc
Q 025755           82 FHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSI  129 (248)
Q Consensus        82 i~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~  129 (248)
                      |+++|...                 .....++.+++  .+++|.+++.
T Consensus       235 id~~g~~~-----------------~~~~~~~~l~~--~G~~v~~g~~  263 (339)
T 1rjw_A          235 VVTAVSKP-----------------AFQSAYNSIRR--GGACVLVGLP  263 (339)
T ss_dssp             EESSCCHH-----------------HHHHHHHHEEE--EEEEEECCCC
T ss_pred             EECCCCHH-----------------HHHHHHHHhhc--CCEEEEeccc
Confidence            99997311                 12334444443  3589988764

>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A

Probab=97.39  E-value=0.0006  Score=57.22  Aligned_cols=99  Identities=13%  Similarity=0.119  Sum_probs=60.1

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCC-----C-eEEEEEcCCCchhh-H-HhhhhcCCCCCeEEEEccCCCHHHHHHHh
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKG-----Y-MVHGTVRDPCDEKN-A-HLKKLEGASENLQLFKTDLLDYEALCAAT   75 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g-----~-~V~~~~r~~~~~~~-~-~~~~~~~~~~~~~~~~~Di~d~~~~~~~~   75 (248)
                      |+|++|.|.||||.+|+.+++.|++++     . +++.+.+..+..+. . ....+.. ..++.+.  |+ +.++    +
T Consensus         7 M~m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~~agk~~~~~~~~l~~-~~~~~~~--~~-~~~~----~   78 (352)
T 2nqt_A            7 ANATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAGSTLGEHHPHLTP-LAHRVVE--PT-EAAV----L   78 (352)
T ss_dssp             CSCEEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESSCTTSBGGGTCTTCGG-GTTCBCE--EC-CHHH----H
T ss_pred             ccCCEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCCcCCCchhhhcccccc-cceeeec--cC-CHHH----h
Confidence            345799999999999999999999887     3 66766543321111 1 0001110 0122222  22 2222    4


Q ss_pred             CCCCEEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccc
Q 025755           76 AGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIG  130 (248)
Q Consensus        76 ~~id~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~  130 (248)
                      +++|+||.+++...                  +..+++.+ +.| .++|-+|+..
T Consensus        79 ~~~DvVf~alg~~~------------------s~~~~~~~-~~G-~~vIDlSa~~  113 (352)
T 2nqt_A           79 GGHDAVFLALPHGH------------------SAVLAQQL-SPE-TLIIDCGADF  113 (352)
T ss_dssp             TTCSEEEECCTTSC------------------CHHHHHHS-CTT-SEEEECSSTT
T ss_pred             cCCCEEEECCCCcc------------------hHHHHHHH-hCC-CEEEEECCCc
Confidence            58999999886432                  34577777 666 4888888854

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=97.37  E-value=0.00014  Score=63.32  Aligned_cols=37  Identities=24%  Similarity=0.119  Sum_probs=34.0

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCC
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPC   41 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~   41 (248)
                      +.+|+++|||++ +||+.+++.|...|++|++++++..
T Consensus       263 L~GKtVvVtGaG-gIG~aiA~~Laa~GA~Viv~D~~~~  299 (488)
T 3ond_A          263 IAGKVAVVAGYG-DVGKGCAAALKQAGARVIVTEIDPI  299 (488)
T ss_dssp             CTTCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred             ccCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHH
Confidence            789999999987 9999999999999999999988753

>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*

Probab=97.36  E-value=0.00014  Score=59.01  Aligned_cols=36  Identities=28%  Similarity=0.501  Sum_probs=29.2

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHH-CCCeEEEE-EcC
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLL-KGYMVHGT-VRD   39 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~-~g~~V~~~-~r~   39 (248)
                      +++++|.|+|++|.+|+.+++.+.+ .|+++++. +++
T Consensus         3 ~~~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~   40 (273)
T 1dih_A            3 DANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALERE   40 (273)
T ss_dssp             CCBEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCT
T ss_pred             CCCcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecC
Confidence            5567999999999999999999885 47888744 444

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=97.34  E-value=0.00054  Score=55.36  Aligned_cols=57  Identities=16%  Similarity=0.089  Sum_probs=48.4

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEE
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVF   82 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi   82 (248)
                      .+.||+++|.|+++-+|+.++..|+..|++|+++.+..                            .++.+.++..|+||
T Consensus       157 ~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t----------------------------~~L~~~~~~ADIVI  208 (285)
T 3p2o_A          157 DLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKT----------------------------KDLSLYTRQADLII  208 (285)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC----------------------------SCHHHHHTTCSEEE
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCc----------------------------hhHHHHhhcCCEEE
Confidence            37899999999999999999999999999999886542                            13557778899999


Q ss_pred             Ecccc
Q 025755           83 HVACP   87 (248)
Q Consensus        83 ~~ag~   87 (248)
                      ...|.
T Consensus       209 ~Avg~  213 (285)
T 3p2o_A          209 VAAGC  213 (285)
T ss_dssp             ECSSC
T ss_pred             ECCCC
Confidence            98874

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=97.33  E-value=0.0005  Score=57.50  Aligned_cols=73  Identities=19%  Similarity=0.224  Sum_probs=48.7

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCC-HHHHHHHhC--CCCEE
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLD-YEALCAATA--GCTGV   81 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d-~~~~~~~~~--~id~v   81 (248)
                      .+++|+|+||+|+||..+++.+...|++|+++ ++..  ..+..+.+.     ...+. +-.+ .+.+.+...  ++|+|
T Consensus       150 ~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~--~~~~~~~lG-----a~~i~-~~~~~~~~~~~~~~~~g~D~v  220 (343)
T 3gaz_A          150 DGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGS--DLEYVRDLG-----ATPID-ASREPEDYAAEHTAGQGFDLV  220 (343)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHH--HHHHHHHHT-----SEEEE-TTSCHHHHHHHHHTTSCEEEE
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHH--HHHHHHHcC-----CCEec-cCCCHHHHHHHHhcCCCceEE
Confidence            47899999999999999999999999999988 5542  222233321     12222 2222 233444433  68999


Q ss_pred             EEccc
Q 025755           82 FHVAC   86 (248)
Q Consensus        82 i~~ag   86 (248)
                      |+++|
T Consensus       221 id~~g  225 (343)
T 3gaz_A          221 YDTLG  225 (343)
T ss_dssp             EESSC
T ss_pred             EECCC
Confidence            99987

>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}

Probab=97.32  E-value=0.0029  Score=52.56  Aligned_cols=112  Identities=14%  Similarity=0.037  Sum_probs=71.0

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCC-eEEEEEcCCCchhh--HHhhhhc---CCCCCeEEEEccCCCHHHHHHHhCCCC
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGY-MVHGTVRDPCDEKN--AHLKKLE---GASENLQLFKTDLLDYEALCAATAGCT   79 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~--~~~~~~~---~~~~~~~~~~~Di~d~~~~~~~~~~id   79 (248)
                      .++|.|+|+ |.+|..++..|+..|+ +|++++++.+....  ..+....   ....++... .|      . ..++++|
T Consensus        14 ~~kI~ViGa-G~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t-~d------~-~al~~aD   84 (328)
T 2hjr_A           14 RKKISIIGA-GQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFGE-NN------Y-EYLQNSD   84 (328)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEE-SC------G-GGGTTCS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEEC-CC------H-HHHCCCC
Confidence            368999998 9999999999999998 99999998753321  1111111   112233322 22      2 3477899


Q ss_pred             EEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCC-EEEEEec
Q 025755           80 GVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVK-RVVVVSS  128 (248)
Q Consensus        80 ~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~-~iV~vSS  128 (248)
                      +||-++|.......  .-.++...|+.-...+.+.+.+.... .+|++|-
T Consensus        85 ~VI~avg~p~k~g~--tr~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tN  132 (328)
T 2hjr_A           85 VVIITAGVPRKPNM--TRSDLLTVNAKIVGSVAENVGKYCPNAFVICITN  132 (328)
T ss_dssp             EEEECCSCCCCTTC--CSGGGHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred             EEEEcCCCCCCCCC--chhhHHhhhHHHHHHHHHHHHHHCCCeEEEEecC
Confidence            99999986432211  11345677888888888888776433 4455543

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=97.30  E-value=0.00056  Score=58.60  Aligned_cols=72  Identities=19%  Similarity=0.158  Sum_probs=51.1

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCC-eEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEE
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGY-MVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVF   82 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi   82 (248)
                      +.+++|+|.|+ |++|+.+++.|...|+ +|++++|+.... ....+.+.     ...  .+   .+++...+.++|+||
T Consensus       165 l~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra-~~la~~~g-----~~~--~~---~~~l~~~l~~aDvVi  232 (404)
T 1gpj_A          165 LHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERA-VELARDLG-----GEA--VR---FDELVDHLARSDVVV  232 (404)
T ss_dssp             CTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHH-HHHHHHHT-----CEE--CC---GGGHHHHHHTCSEEE
T ss_pred             ccCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHH-HHHHHHcC-----Cce--ec---HHhHHHHhcCCCEEE
Confidence            67899999998 9999999999999998 899999876321 12222221     111  22   235666677899999


Q ss_pred             Ecccc
Q 025755           83 HVACP   87 (248)
Q Consensus        83 ~~ag~   87 (248)
                      .+.+.
T Consensus       233 ~at~~  237 (404)
T 1gpj_A          233 SATAA  237 (404)
T ss_dssp             ECCSS
T ss_pred             EccCC
Confidence            99753

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=97.30  E-value=0.00061  Score=57.63  Aligned_cols=74  Identities=12%  Similarity=0.107  Sum_probs=49.0

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHh--CCCCEEE
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAAT--AGCTGVF   82 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~--~~id~vi   82 (248)
                      .+++|+|+||+|+||..+++.+...|++|+++++ ..  ..+..+.+   ..+ ..  .|..+.+..+.+.  .++|+||
T Consensus       183 ~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~~-~~--~~~~~~~l---Ga~-~v--~~~~~~~~~~~~~~~~g~D~vi  253 (375)
T 2vn8_A          183 TGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCS-QD--ASELVRKL---GAD-DV--IDYKSGSVEEQLKSLKPFDFIL  253 (375)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC-GG--GHHHHHHT---TCS-EE--EETTSSCHHHHHHTSCCBSEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEeC-hH--HHHHHHHc---CCC-EE--EECCchHHHHHHhhcCCCCEEE
Confidence            5789999999999999999999899999998873 32  22223322   112 12  2443332222222  4799999


Q ss_pred             Ecccc
Q 025755           83 HVACP   87 (248)
Q Consensus        83 ~~ag~   87 (248)
                      +++|.
T Consensus       254 d~~g~  258 (375)
T 2vn8_A          254 DNVGG  258 (375)
T ss_dssp             ESSCT
T ss_pred             ECCCC
Confidence            99974

>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}

Probab=97.28  E-value=0.0015  Score=53.82  Aligned_cols=114  Identities=13%  Similarity=0.069  Sum_probs=72.5

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCCC--eEEEEEcCCCchhhH--HhhhhcC-CCCCeEEEEccCCCHHHHHHHhCCCCEE
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKGY--MVHGTVRDPCDEKNA--HLKKLEG-ASENLQLFKTDLLDYEALCAATAGCTGV   81 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g~--~V~~~~r~~~~~~~~--~~~~~~~-~~~~~~~~~~Di~d~~~~~~~~~~id~v   81 (248)
                      |+|.|+|+ |.+|..++..|+..|.  +|++++++.....-.  .+..... ...+......|  +    ...++++|+|
T Consensus         1 Mkv~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~--~----~~a~~~aDvV   73 (314)
T 3nep_X            1 MKVTVIGA-GNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTN--D----YGPTEDSDVC   73 (314)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEES--S----SGGGTTCSEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECC--C----HHHhCCCCEE
Confidence            47999996 9999999999999886  899999987432211  1111100 01123333222  1    2457789999


Q ss_pred             EEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCC-CEEEEEecc
Q 025755           82 FHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKV-KRVVVVSSI  129 (248)
Q Consensus        82 i~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~-~~iV~vSS~  129 (248)
                      |.+||......  ..-.+.++.|..-.+.+.+.+.+... ..++.+|-.
T Consensus        74 ii~ag~~~kpG--~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvtNP  120 (314)
T 3nep_X           74 IITAGLPRSPG--MSRDDLLAKNTEIVGGVTEQFVEGSPDSTIIVVANP  120 (314)
T ss_dssp             EECCCC---------CHHHHHHHHHHHHHHHHHHHTTCTTCEEEECCSS
T ss_pred             EECCCCCCCCC--CCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEecCCc
Confidence            99998753321  12256789999999999999988743 466666643

>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1

Probab=97.27  E-value=0.0028  Score=52.57  Aligned_cols=115  Identities=15%  Similarity=0.045  Sum_probs=75.4

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCC--eEEEEEcCCCchhhH--HhhhhcCCCCCeEEE-EccCCCHHHHHHHhCCCC
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGY--MVHGTVRDPCDEKNA--HLKKLEGASENLQLF-KTDLLDYEALCAATAGCT   79 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~--~V~~~~r~~~~~~~~--~~~~~~~~~~~~~~~-~~Di~d~~~~~~~~~~id   79 (248)
                      ..++|.|+|+ |.+|..++..|+..|.  +|++++++.....-.  .+............. ..|.   +    .++++|
T Consensus        20 ~~~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~---~----~~~daD   91 (330)
T 3ldh_A           20 SYNKITVVGC-DAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDY---S----VSAGSK   91 (330)
T ss_dssp             CCCEEEEEST-THHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEESSS---C----SCSSCS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEcCCH---H----HhCCCC
Confidence            3579999999 9999999999999886  899999865322211  111111111122222 2333   2    167899


Q ss_pred             EEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCC-CEEEEEecc
Q 025755           80 GVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKV-KRVVVVSSI  129 (248)
Q Consensus        80 ~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~-~~iV~vSS~  129 (248)
                      +||-+||......  ..-.+.+..|..-.+.+.+.+.+... ..++.+|-.
T Consensus        92 iVIitaG~p~kpG--~tR~dll~~N~~I~k~i~~~I~k~~P~a~ilvvtNP  140 (330)
T 3ldh_A           92 LVVITAGARQQEG--ESRLNLVQRNVNIFKFIIPNIVKHSPDCLKELHPEL  140 (330)
T ss_dssp             EEEECCSCCCCSS--CCTTGGGHHHHHHHHHHHHHHHHHCTTCEEEECSSS
T ss_pred             EEEEeCCCCCCCC--CCHHHHHHhhHHHHHHHHHHHHhhCCCceEEeCCCc
Confidence            9999999754322  22256788999989999999888743 456666643

>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*

Probab=97.27  E-value=0.0021  Score=53.31  Aligned_cols=114  Identities=13%  Similarity=0.146  Sum_probs=73.0

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCC--eEEEEEcCCCchhhHHhhhhcC---CCCCeEEEEccCCCHHHHHHHhCCCC
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGY--MVHGTVRDPCDEKNAHLKKLEG---ASENLQLFKTDLLDYEALCAATAGCT   79 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~~Di~d~~~~~~~~~~id   79 (248)
                      +++||.|+|+ |.+|..++..|+..+.  ++++++++..... .....+..   ...++.+.. |  +    ...++++|
T Consensus         8 ~~~KI~IiGa-G~vG~~la~~l~~~~~~~el~L~Di~~~~~~-g~~~dl~~~~~~~~~~~i~~-~--~----~~a~~~aD   78 (326)
T 2zqz_A            8 DHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTK-GDAIDLSNALPFTSPKKIYS-A--E----YSDAKDAD   78 (326)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHH-HHHHHHHTTGGGSCCCEEEE-C--C----GGGGGGCS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHhH-HHHHHHHHHHHhcCCeEEEE-C--C----HHHhCCCC
Confidence            4579999999 9999999999998775  8999988653221 11111111   113344433 2  2    33477899


Q ss_pred             EEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCC-CEEEEEecc
Q 025755           80 GVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKV-KRVVVVSSI  129 (248)
Q Consensus        80 ~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~-~~iV~vSS~  129 (248)
                      +||..+|.....  ...-.+++..|+.....+.+.+.+... ..+|.+|-.
T Consensus        79 vVii~ag~~~k~--g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNP  127 (326)
T 2zqz_A           79 LVVITAGAPQKP--GETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAANP  127 (326)
T ss_dssp             EEEECCCCC-------CHHHHHHHHHHHHHHHHHHHHHHTCCSEEEECSSS
T ss_pred             EEEEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCc
Confidence            999999864322  112245678888888899988887743 466666543

>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A

Probab=97.25  E-value=0.0011  Score=57.14  Aligned_cols=70  Identities=19%  Similarity=0.168  Sum_probs=54.1

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEE
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVF   82 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi   82 (248)
                      -+.+|+|+|.|+ |.+|+.+++.+.+.|++|++++.+........ .      +  ..+..|..|.+.+.++++++|+|+
T Consensus        32 ~~~~~~IlIlG~-G~lg~~~~~aa~~lG~~v~v~d~~~~~p~~~~-a------d--~~~~~~~~d~~~l~~~a~~~D~V~  101 (419)
T 4e4t_A           32 ILPGAWLGMVGG-GQLGRMFCFAAQSMGYRVAVLDPDPASPAGAV-A------D--RHLRAAYDDEAALAELAGLCEAVS  101 (419)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCTTCHHHHH-S------S--EEECCCTTCHHHHHHHHHHCSEEE
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCCCcCchhhh-C------C--EEEECCcCCHHHHHHHHhcCCEEE
Confidence            357899999986 57999999999999999999876553222111 0      1  345689999999999998999987

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=97.25  E-value=0.00083  Score=56.17  Aligned_cols=75  Identities=12%  Similarity=0.065  Sum_probs=50.4

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCC--HHHHHHHh-CCCCEE
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLD--YEALCAAT-AGCTGV   81 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d--~~~~~~~~-~~id~v   81 (248)
                      .+++|+|+||+|++|...++.+...|++|++++++..  ..+..+.+.   .+ ..+  |..+  .+.+.++. .++|+|
T Consensus       150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~--~~~~~~~lG---a~-~vi--~~~~~~~~~~~~~~~~g~Dvv  221 (346)
T 3fbg_A          150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNE--TIEWTKKMG---AD-IVL--NHKESLLNQFKTQGIELVDYV  221 (346)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHH--HHHHHHHHT---CS-EEE--CTTSCHHHHHHHHTCCCEEEE
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHH--HHHHHHhcC---Cc-EEE--ECCccHHHHHHHhCCCCccEE
Confidence            5789999999999999999999999999999988653  223333321   11 122  2222  23344432 258999


Q ss_pred             EEcccc
Q 025755           82 FHVACP   87 (248)
Q Consensus        82 i~~ag~   87 (248)
                      |+++|.
T Consensus       222 ~d~~g~  227 (346)
T 3fbg_A          222 FCTFNT  227 (346)
T ss_dssp             EESSCH
T ss_pred             EECCCc
Confidence            999874

>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A

Probab=97.23  E-value=0.00031  Score=58.55  Aligned_cols=69  Identities=12%  Similarity=-0.001  Sum_probs=56.1

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHH-hCCCCEEEEcc
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAA-TAGCTGVFHVA   85 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~-~~~id~vi~~a   85 (248)
                      ++++|.|. |.+|+.+++.|.++|+ |++++++++..  . ..     ..++.++.+|.+|++.++++ ++++|.||-+.
T Consensus       116 ~~viI~G~-G~~g~~l~~~L~~~g~-v~vid~~~~~~--~-~~-----~~~~~~i~gd~~~~~~L~~a~i~~a~~vi~~~  185 (336)
T 1lnq_A          116 RHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRK--K-VL-----RSGANFVHGDPTRVSDLEKANVRGARAVIVDL  185 (336)
T ss_dssp             CEEEEESC-CHHHHHHHTTGGGSCE-EEEESCGGGHH--H-HH-----HTTCEEEESCTTSHHHHHHTCSTTEEEEEECC
T ss_pred             CCEEEECC-cHHHHHHHHHHHhCCc-EEEEeCChhhh--h-HH-----hCCcEEEEeCCCCHHHHHhcChhhccEEEEcC
Confidence            58999996 8999999999999999 99998876421  1 22     14678999999999999988 77889888655

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=97.22  E-value=0.00081  Score=58.60  Aligned_cols=73  Identities=15%  Similarity=0.130  Sum_probs=56.0

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHH-hCCCCEEEEc
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAA-TAGCTGVFHV   84 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~-~~~id~vi~~   84 (248)
                      .|+|+|.|+ |.+|+.+++.|.++|++|++++++.+.. ......     -++..+.+|-++++.++++ ++++|.+|-+
T Consensus         3 ~M~iiI~G~-G~vG~~la~~L~~~~~~v~vId~d~~~~-~~~~~~-----~~~~~i~Gd~~~~~~L~~Agi~~ad~~ia~   75 (461)
T 4g65_A            3 AMKIIILGA-GQVGGTLAENLVGENNDITIVDKDGDRL-RELQDK-----YDLRVVNGHASHPDVLHEAGAQDADMLVAV   75 (461)
T ss_dssp             CEEEEEECC-SHHHHHHHHHTCSTTEEEEEEESCHHHH-HHHHHH-----SSCEEEESCTTCHHHHHHHTTTTCSEEEEC
T ss_pred             cCEEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHH-HHHHHh-----cCcEEEEEcCCCHHHHHhcCCCcCCEEEEE
Confidence            468899987 6799999999999999999999886321 111111     2578899999999999987 4678988744


Q ss_pred             c
Q 025755           85 A   85 (248)
Q Consensus        85 a   85 (248)
                      .
T Consensus        76 t   76 (461)
T 4g65_A           76 T   76 (461)
T ss_dssp             C
T ss_pred             c
Confidence            3

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}

Probab=97.20  E-value=0.00096  Score=54.32  Aligned_cols=57  Identities=11%  Similarity=-0.013  Sum_probs=48.1

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHH--HHhCCCCE
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALC--AATAGCTG   80 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~--~~~~~id~   80 (248)
                      .+.||+++|.|.++-+|+.++..|++.|++|+++.|...                            ++.  +.++..|+
T Consensus       162 ~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T~----------------------------~l~l~~~~~~ADI  213 (300)
T 4a26_A          162 EMAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSGTS----------------------------TEDMIDYLRTADI  213 (300)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTSC----------------------------HHHHHHHHHTCSE
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCCC----------------------------CchhhhhhccCCE
Confidence            378999999999999999999999999999999876431                            233  66778999


Q ss_pred             EEEcccc
Q 025755           81 VFHVACP   87 (248)
Q Consensus        81 vi~~ag~   87 (248)
                      ||...|.
T Consensus       214 VI~Avg~  220 (300)
T 4a26_A          214 VIAAMGQ  220 (300)
T ss_dssp             EEECSCC
T ss_pred             EEECCCC
Confidence            9998885

>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*

Probab=97.19  E-value=0.0037  Score=51.52  Aligned_cols=106  Identities=17%  Similarity=0.091  Sum_probs=65.2

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCC--eEEEEEcCCCchhhHHh--hhhcCCCCCeEEEEccCCCHHHHHHHhCCCCE
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGY--MVHGTVRDPCDEKNAHL--KKLEGASENLQLFKTDLLDYEALCAATAGCTG   80 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~--~V~~~~r~~~~~~~~~~--~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~   80 (248)
                      ++++|.|+|+ |.+|..++..|+..|+  +|++++|+.........  ...........+...  .+.+    .++++|+
T Consensus         6 ~~mkI~IiGa-G~vG~~~a~~l~~~g~~~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~----~~~~aD~   78 (319)
T 1lld_A            6 KPTKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGS--DDPE----ICRDADM   78 (319)
T ss_dssp             -CCEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEE--SCGG----GGTTCSE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHhhhhhcCCeEEEeC--CCHH----HhCCCCE
Confidence            3579999998 9999999999999998  99999987532211111  111111112222222  1222    3568999


Q ss_pred             EEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcC
Q 025755           81 VFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAK  119 (248)
Q Consensus        81 vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~  119 (248)
                      ||-+++.....  ...-.+++..|+.....+++.+.+..
T Consensus        79 Vii~v~~~~~~--g~~r~~~~~~n~~~~~~~~~~i~~~~  115 (319)
T 1lld_A           79 VVITAGPRQKP--GQSRLELVGATVNILKAIMPNLVKVA  115 (319)
T ss_dssp             EEECCCCCCCT--TCCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             EEECCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHhC
Confidence            99999754321  12224566777777777777777653

>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}

Probab=97.19  E-value=0.001  Score=53.74  Aligned_cols=57  Identities=16%  Similarity=0.060  Sum_probs=48.1

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEE
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVF   82 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi   82 (248)
                      .+.||+++|.|+++-+|+.++..|+..|++|+++.+..                            .++.+.++..|+||
T Consensus       158 ~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t----------------------------~~L~~~~~~ADIVI  209 (285)
T 3l07_A          158 KTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFT----------------------------TDLKSHTTKADILI  209 (285)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC----------------------------SSHHHHHTTCSEEE
T ss_pred             CCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc----------------------------hhHHHhcccCCEEE
Confidence            37899999999999999999999999999999876432                            13557788899999


Q ss_pred             Ecccc
Q 025755           83 HVACP   87 (248)
Q Consensus        83 ~~ag~   87 (248)
                      ...|.
T Consensus       210 ~Avg~  214 (285)
T 3l07_A          210 VAVGK  214 (285)
T ss_dssp             ECCCC
T ss_pred             ECCCC
Confidence            98874

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=97.19  E-value=0.00063  Score=56.25  Aligned_cols=74  Identities=19%  Similarity=0.197  Sum_probs=51.9

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEEc
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFHV   84 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~~   84 (248)
                      .+.+|+|+||+|++|...++.+...|++|++++++.   ..+..+.+.   .. .  ..|..+.+.+.+..+++|+||.+
T Consensus       152 ~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~~---~~~~~~~lG---a~-~--~i~~~~~~~~~~~~~g~D~v~d~  222 (321)
T 3tqh_A          152 QGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASKR---NHAFLKALG---AE-Q--CINYHEEDFLLAISTPVDAVIDL  222 (321)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECHH---HHHHHHHHT---CS-E--EEETTTSCHHHHCCSCEEEEEES
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeccc---hHHHHHHcC---CC-E--EEeCCCcchhhhhccCCCEEEEC
Confidence            578999999999999999999999999999887432   222233321   11 1  23444444355666789999999


Q ss_pred             ccc
Q 025755           85 ACP   87 (248)
Q Consensus        85 ag~   87 (248)
                      .|.
T Consensus       223 ~g~  225 (321)
T 3tqh_A          223 VGG  225 (321)
T ss_dssp             SCH
T ss_pred             CCc
Confidence            873

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=97.19  E-value=0.0014  Score=55.30  Aligned_cols=74  Identities=14%  Similarity=0.134  Sum_probs=52.2

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEEc
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFHV   84 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~~   84 (248)
                      .+.+|+|+|+ |++|...++.+...|++|++++++..+.  +..+.+.   .+ .  ..|..+.+.++++..++|+||.+
T Consensus       194 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~--~~a~~lG---a~-~--vi~~~~~~~~~~~~~g~Dvvid~  264 (369)
T 1uuf_A          194 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKR--EAAKALG---AD-E--VVNSRNADEMAAHLKSFDFILNT  264 (369)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGH--HHHHHHT---CS-E--EEETTCHHHHHTTTTCEEEEEEC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHH--HHHHHcC---Cc-E--EeccccHHHHHHhhcCCCEEEEC
Confidence            4789999997 8899999999888999999999876422  2222221   11 1  23555655555555679999999


Q ss_pred             ccc
Q 025755           85 ACP   87 (248)
Q Consensus        85 ag~   87 (248)
                      +|.
T Consensus       265 ~g~  267 (369)
T 1uuf_A          265 VAA  267 (369)
T ss_dssp             CSS
T ss_pred             CCC
Confidence            875

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=97.18  E-value=0.00071  Score=55.52  Aligned_cols=72  Identities=15%  Similarity=0.128  Sum_probs=52.1

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEE
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVF   82 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi   82 (248)
                      .+.+++++|.|+ |.||+.+++.|...|++|++++|+....  ......     .+..+     +.+++..++++.|+||
T Consensus       154 ~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~~~~~--~~~~~~-----g~~~~-----~~~~l~~~l~~aDvVi  220 (300)
T 2rir_A          154 TIHGSQVAVLGL-GRTGMTIARTFAALGANVKVGARSSAHL--ARITEM-----GLVPF-----HTDELKEHVKDIDICI  220 (300)
T ss_dssp             CSTTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHH--HHHHHT-----TCEEE-----EGGGHHHHSTTCSEEE
T ss_pred             CCCCCEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECCHHHH--HHHHHC-----CCeEE-----chhhHHHHhhCCCEEE
Confidence            367899999996 8999999999999999999999876321  111111     12222     1245777888999999


Q ss_pred             Ecccc
Q 025755           83 HVACP   87 (248)
Q Consensus        83 ~~ag~   87 (248)
                      .+...
T Consensus       221 ~~~p~  225 (300)
T 2rir_A          221 NTIPS  225 (300)
T ss_dssp             ECCSS
T ss_pred             ECCCh
Confidence            88754

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=97.17  E-value=0.002  Score=53.96  Aligned_cols=76  Identities=18%  Similarity=0.048  Sum_probs=50.0

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEcc--CCCHHHHHHHh-----CC
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTD--LLDYEALCAAT-----AG   77 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D--i~d~~~~~~~~-----~~   77 (248)
                      .+++|+|+|+ |++|..+++.+...|++|++++++..  ..+..+.+   ..+ ..+..+  -...+.+.+..     .+
T Consensus       168 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~--~~~~~~~l---Ga~-~~~~~~~~~~~~~~i~~~~~~~~g~g  240 (352)
T 1e3j_A          168 LGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPR--RLEVAKNC---GAD-VTLVVDPAKEEESSIIERIRSAIGDL  240 (352)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHH--HHHHHHHT---TCS-EEEECCTTTSCHHHHHHHHHHHSSSC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEcCCHH--HHHHHHHh---CCC-EEEcCcccccHHHHHHHHhccccCCC
Confidence            5789999997 89999999998889999988887753  22222222   122 222111  22234555554     36


Q ss_pred             CCEEEEcccc
Q 025755           78 CTGVFHVACP   87 (248)
Q Consensus        78 id~vi~~ag~   87 (248)
                      +|+||+++|.
T Consensus       241 ~D~vid~~g~  250 (352)
T 1e3j_A          241 PNVTIDCSGN  250 (352)
T ss_dssp             CSEEEECSCC
T ss_pred             CCEEEECCCC
Confidence            9999999873

>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*

Probab=97.17  E-value=0.0081  Score=49.70  Aligned_cols=114  Identities=12%  Similarity=-0.009  Sum_probs=70.9

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCC-eEEEEEcCCCchhh--HHhhhh---cCCCCCeEEEEccCCCHHHHHHHhCCCC
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGY-MVHGTVRDPCDEKN--AHLKKL---EGASENLQLFKTDLLDYEALCAATAGCT   79 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~--~~~~~~---~~~~~~~~~~~~Di~d~~~~~~~~~~id   79 (248)
                      +++|.|+|+ |.+|..++..|+..|+ +|++++++......  ..+...   .....++... .|      . +.++++|
T Consensus         4 ~~kI~VIGa-G~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t-~d------~-~al~~aD   74 (322)
T 1t2d_A            4 KAKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGS-NT------Y-DDLAGAD   74 (322)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEE-CC------G-GGGTTCS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEEC-CC------H-HHhCCCC
Confidence            468999998 9999999999999998 98899888643221  111111   0112223221 22      2 3478999


Q ss_pred             EEEEccccCCCCCCC---CccccchhhhHHHHHHHHHHHHhcCC-CEEEEEec
Q 025755           80 GVFHVACPVPVGKVP---NPEVQLIDPAVVGTKNVLNSCVKAKV-KRVVVVSS  128 (248)
Q Consensus        80 ~vi~~ag~~~~~~~~---~~~~~~~~~n~~g~~~~~~~~~~~~~-~~iV~vSS  128 (248)
                      +||.++|........   ..-.++...|+.-.+.+.+.+.+... ..+|++|-
T Consensus        75 ~Vi~a~g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tN  127 (322)
T 1t2d_A           75 VVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIVVTN  127 (322)
T ss_dssp             EEEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSS
T ss_pred             EEEEeCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence            999999864322111   00245567787778888888777643 34555543

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=97.17  E-value=0.0012  Score=53.22  Aligned_cols=66  Identities=17%  Similarity=0.051  Sum_probs=46.9

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEEcc
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFHVA   85 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~~a   85 (248)
                      +|+++|+|+ |+.|++++..|++.|.+|+++.|+.++.....  .+.     +...  +..+   +    .+.|+|||+.
T Consensus       118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~~la--~~~-----~~~~--~~~~---l----~~~DiVInaT  180 (269)
T 3phh_A          118 YQNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLDFFQ--RLG-----CDCF--MEPP---K----SAFDLIINAT  180 (269)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH--HHT-----CEEE--SSCC---S----SCCSEEEECC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--HCC-----CeEe--cHHH---h----ccCCEEEEcc
Confidence            789999997 89999999999999999999999875432222  221     2222  2222   1    2789999987


Q ss_pred             ccC
Q 025755           86 CPV   88 (248)
Q Consensus        86 g~~   88 (248)
                      ...
T Consensus       181 p~G  183 (269)
T 3phh_A          181 SAS  183 (269)
T ss_dssp             TTC
T ss_pred             cCC
Confidence            543

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=97.17  E-value=0.00049  Score=55.89  Aligned_cols=68  Identities=16%  Similarity=0.208  Sum_probs=47.8

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCC-eEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEE
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGY-MVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVF   82 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi   82 (248)
                      +++|+++|+|+ |+.|++++..|.+.|. +|+++.|+.++. ..    +..   ++..+     +.+++.. + +.|+||
T Consensus       120 ~~~k~vlvlGa-GGaaraia~~L~~~G~~~v~v~nRt~~ka-~~----La~---~~~~~-----~~~~l~~-l-~~DivI  183 (282)
T 3fbt_A          120 IKNNICVVLGS-GGAARAVLQYLKDNFAKDIYVVTRNPEKT-SE----IYG---EFKVI-----SYDELSN-L-KGDVII  183 (282)
T ss_dssp             CTTSEEEEECS-STTHHHHHHHHHHTTCSEEEEEESCHHHH-HH----HCT---TSEEE-----EHHHHTT-C-CCSEEE
T ss_pred             ccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHH-HH----HHH---hcCcc-----cHHHHHh-c-cCCEEE
Confidence            57899999997 6899999999999998 899999986421 11    111   22221     2234444 4 789999


Q ss_pred             Ecccc
Q 025755           83 HVACP   87 (248)
Q Consensus        83 ~~ag~   87 (248)
                      |+...
T Consensus       184 naTp~  188 (282)
T 3fbt_A          184 NCTPK  188 (282)
T ss_dssp             ECSST
T ss_pred             ECCcc
Confidence            99754

>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*

Probab=97.14  E-value=0.0013  Score=51.21  Aligned_cols=66  Identities=21%  Similarity=0.207  Sum_probs=46.2

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEEc
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFHV   84 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~~   84 (248)
                      ++++|.|+| +|.+|+.+++.|.+.|++|++++|+.+..     +.+...  .+...        ++..+++++|+||.+
T Consensus        27 ~~~~I~iiG-~G~~G~~la~~l~~~g~~V~~~~r~~~~~-----~~~~~~--g~~~~--------~~~~~~~~~DvVi~a   90 (215)
T 2vns_A           27 EAPKVGILG-SGDFARSLATRLVGSGFKVVVGSRNPKRT-----ARLFPS--AAQVT--------FQEEAVSSPEVIFVA   90 (215)
T ss_dssp             --CCEEEEC-CSHHHHHHHHHHHHTTCCEEEEESSHHHH-----HHHSBT--TSEEE--------EHHHHTTSCSEEEEC
T ss_pred             CCCEEEEEc-cCHHHHHHHHHHHHCCCEEEEEeCCHHHH-----HHHHHc--CCcee--------cHHHHHhCCCEEEEC
Confidence            356899998 89999999999999999999999875321     111111  23221        344567789999987


Q ss_pred             cc
Q 025755           85 AC   86 (248)
Q Consensus        85 ag   86 (248)
                      ..
T Consensus        91 v~   92 (215)
T 2vns_A           91 VF   92 (215)
T ss_dssp             SC
T ss_pred             CC
Confidence            75

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=97.14  E-value=0.00083  Score=54.91  Aligned_cols=71  Identities=13%  Similarity=0.091  Sum_probs=51.3

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEE
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVF   82 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi   82 (248)
                      .+.+++++|.| .|.||+.+++.|...|++|++++|+....  ......     .+..+     +.+++..++++.|+|+
T Consensus       152 ~l~g~~v~IiG-~G~iG~~~a~~l~~~G~~V~~~dr~~~~~--~~~~~~-----g~~~~-----~~~~l~~~l~~aDvVi  218 (293)
T 3d4o_A          152 TIHGANVAVLG-LGRVGMSVARKFAALGAKVKVGARESDLL--ARIAEM-----GMEPF-----HISKAAQELRDVDVCI  218 (293)
T ss_dssp             CSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSHHHH--HHHHHT-----TSEEE-----EGGGHHHHTTTCSEEE
T ss_pred             CCCCCEEEEEe-eCHHHHHHHHHHHhCCCEEEEEECCHHHH--HHHHHC-----CCeec-----ChhhHHHHhcCCCEEE
Confidence            46789999999 58999999999999999999999876321  111111     12222     2245777788999999


Q ss_pred             Eccc
Q 025755           83 HVAC   86 (248)
Q Consensus        83 ~~ag   86 (248)
                      .+..
T Consensus       219 ~~~p  222 (293)
T 3d4o_A          219 NTIP  222 (293)
T ss_dssp             ECCS
T ss_pred             ECCC
Confidence            8873

>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}

Probab=97.12  E-value=0.0011  Score=53.64  Aligned_cols=57  Identities=23%  Similarity=0.109  Sum_probs=47.4

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEE
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVF   82 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi   82 (248)
                      .++||+++|.|.++-+|+.++..|+..|++|+++.+..                            .++.+.++..|+||
T Consensus       158 ~l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~T----------------------------~~L~~~~~~ADIVI  209 (286)
T 4a5o_A          158 DLYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRFT----------------------------RDLADHVSRADLVV  209 (286)
T ss_dssp             CCTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTTC----------------------------SCHHHHHHTCSEEE
T ss_pred             CCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCC----------------------------cCHHHHhccCCEEE
Confidence            37899999999999999999999999999999886532                            13556677889999


Q ss_pred             Ecccc
Q 025755           83 HVACP   87 (248)
Q Consensus        83 ~~ag~   87 (248)
                      ...|.
T Consensus       210 ~Avg~  214 (286)
T 4a5o_A          210 VAAGK  214 (286)
T ss_dssp             ECCCC
T ss_pred             ECCCC
Confidence            88874

>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*

Probab=97.11  E-value=0.0038  Score=50.92  Aligned_cols=114  Identities=14%  Similarity=0.062  Sum_probs=73.3

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCCC--eEEEEEcCCCch--hhHHhhhhcC-CCCCeEEEEccCCCHHHHHHHhCCCCEE
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKGY--MVHGTVRDPCDE--KNAHLKKLEG-ASENLQLFKTDLLDYEALCAATAGCTGV   81 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g~--~V~~~~r~~~~~--~~~~~~~~~~-~~~~~~~~~~Di~d~~~~~~~~~~id~v   81 (248)
                      |||.|+|+ |+||..++-.|+.++.  ++.+++.+....  ....+..... ..........+  |.+    .+++.|+|
T Consensus         1 MKV~IiGa-G~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~~--d~~----~~~~aDvV   73 (294)
T 2x0j_A            1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGA--DYS----LLKGSEII   73 (294)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEES--CGG----GGTTCSEE
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecCC--CHH----HhCCCCEE
Confidence            47899995 9999999999988773  788888865211  1111211111 11222333221  222    36789999


Q ss_pred             EEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCC-CEEEEEecc
Q 025755           82 FHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKV-KRVVVVSSI  129 (248)
Q Consensus        82 i~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~-~~iV~vSS~  129 (248)
                      |-.||......  ..-.+.++.|..-.+.+.+.+.+... ..++.+|-.
T Consensus        74 vitAG~prkpG--mtR~dLl~~Na~I~~~i~~~i~~~~p~aivlvvsNP  120 (294)
T 2x0j_A           74 VVTAGLARKPG--MTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTNP  120 (294)
T ss_dssp             EECCCCCCCSS--SCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSSS
T ss_pred             EEecCCCCCCC--CchHHHHHHHHHHHHHHHHHHHhcCCceEEEEecCc
Confidence            99999755432  22257889999999999999998854 345555543

>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A

Probab=97.11  E-value=0.0022  Score=54.26  Aligned_cols=69  Identities=13%  Similarity=0.082  Sum_probs=53.5

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEE
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVF   82 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi   82 (248)
                      +.+|+|+|.|+ |.+|+.+++.+.+.|++|++++.+........        . -..+..|..|.+.+.++.+++|+|+
T Consensus        10 ~~~~~IlIlG~-G~lg~~la~aa~~lG~~viv~d~~~~~p~~~~--------a-d~~~~~~~~d~~~l~~~~~~~dvi~   78 (377)
T 3orq_A           10 KFGATIGIIGG-GQLGKMMAQSAQKMGYKVVVLDPSEDCPCRYV--------A-HEFIQAKYDDEKALNQLGQKCDVIT   78 (377)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCTTCTTGGG--------S-SEEEECCTTCHHHHHHHHHHCSEEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCCChhhhh--------C-CEEEECCCCCHHHHHHHHHhCCcce
Confidence            46789999986 56899999999999999999987654221111        1 1356789999999999998999874

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=97.10  E-value=0.001  Score=55.92  Aligned_cols=74  Identities=14%  Similarity=-0.004  Sum_probs=50.4

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCH-HHHHHHhCCCCEEEE
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDY-EALCAATAGCTGVFH   83 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~-~~~~~~~~~id~vi~   83 (248)
                      .+++|+|+|+ |++|..+++.+...|++|++++++..+.  +..+.+.   .+ ..  .|..+. +..+.+..++|+||.
T Consensus       179 ~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~--~~~~~lG---a~-~v--~~~~~~~~~~~~~~~~~D~vid  249 (360)
T 1piw_A          179 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKR--EDAMKMG---AD-HY--IATLEEGDWGEKYFDTFDLIVV  249 (360)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTH--HHHHHHT---CS-EE--EEGGGTSCHHHHSCSCEEEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHH--HHHHHcC---CC-EE--EcCcCchHHHHHhhcCCCEEEE
Confidence            4789999999 9999999999888899999999876532  2222221   11 12  233332 223333357999999


Q ss_pred             cccc
Q 025755           84 VACP   87 (248)
Q Consensus        84 ~ag~   87 (248)
                      ++|.
T Consensus       250 ~~g~  253 (360)
T 1piw_A          250 CASS  253 (360)
T ss_dssp             CCSC
T ss_pred             CCCC
Confidence            9985

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=97.09  E-value=0.0015  Score=56.71  Aligned_cols=36  Identities=25%  Similarity=0.365  Sum_probs=32.8

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCC
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDP   40 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~   40 (248)
                      .+++|+|+|++|+||...++.+...|++|++++++.
T Consensus       228 ~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~  263 (456)
T 3krt_A          228 QGDNVLIWGASGGLGSYATQFALAGGANPICVVSSP  263 (456)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCH
Confidence            478999999999999999999999999999998754

>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A

Probab=97.09  E-value=0.0066  Score=50.10  Aligned_cols=112  Identities=15%  Similarity=0.039  Sum_probs=69.7

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCC-eEEEEEcCCCchhhHHhh--hh---cCCCCCeEEEEccCCCHHHHHHHhCCCC
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGY-MVHGTVRDPCDEKNAHLK--KL---EGASENLQLFKTDLLDYEALCAATAGCT   79 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~~~~~--~~---~~~~~~~~~~~~Di~d~~~~~~~~~~id   79 (248)
                      +++|.|+|+ |.+|..++..|+..|+ +|++++++.+........  ..   .....++... .   |   . ..++++|
T Consensus         4 ~~kI~VIGa-G~~G~~ia~~la~~g~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t-~---d---~-~a~~~aD   74 (317)
T 2ewd_A            4 RRKIAVIGS-GQIGGNIAYIVGKDNLADVVLFDIAEGIPQGKALDITHSMVMFGSTSKVIGT-D---D---Y-ADISGSD   74 (317)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEE-S---C---G-GGGTTCS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCchHHHHHHHHHHhhhhhcCCCcEEEEC-C---C---H-HHhCCCC
Confidence            468999998 9999999999999998 999999987433221111  10   0111223221 2   2   2 3467899


Q ss_pred             EEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCC-CEEEEEec
Q 025755           80 GVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKV-KRVVVVSS  128 (248)
Q Consensus        80 ~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~-~~iV~vSS  128 (248)
                      +||-+++.......  .-.+.+..|....+.+++.+.+... ..+|.+|.
T Consensus        75 iVi~avg~p~~~g~--~r~d~~~~~~~i~~~i~~~i~~~~~~~iii~~sN  122 (317)
T 2ewd_A           75 VVIITASIPGRPKD--DRSELLFGNARILDSVAEGVKKYCPNAFVICITN  122 (317)
T ss_dssp             EEEECCCCSSCCSS--CGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECCS
T ss_pred             EEEEeCCCCCCCCC--cHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEeCC
Confidence            99999986443221  1134556677777777777776633 34555554

>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*

Probab=97.08  E-value=0.001  Score=56.04  Aligned_cols=118  Identities=13%  Similarity=-0.006  Sum_probs=73.7

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCC-----eEEEEEcCCCch---hhHHhhhhcCCC-CCeEEEEccCCCHHHHHHHhC
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGY-----MVHGTVRDPCDE---KNAHLKKLEGAS-ENLQLFKTDLLDYEALCAATA   76 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~-----~V~~~~r~~~~~---~~~~~~~~~~~~-~~~~~~~~Di~d~~~~~~~~~   76 (248)
                      ..+|.|+||+|.||.+++-.|+..+.     .+.+.+.+.+..   .....-.+.... +-..-+  .+.+  .....++
T Consensus        32 ~~KV~ViGAaG~VG~~la~~l~~~~l~~e~~~l~L~d~d~~~~~~~~~G~amDL~h~~~p~~~~v--~i~~--~~y~~~~  107 (375)
T 7mdh_A           32 LVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREV--SIGI--DPYEVFE  107 (375)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEE--EEES--CHHHHTT
T ss_pred             CCEEEEECCCChHHHHHHHHHHcCCcCCCCceeEEEecCccchhhhhHHHHHhHHhhhhhhcCCc--EEec--CCHHHhC
Confidence            57899999999999999999998763     266655544221   111111122111 111111  1222  2356688


Q ss_pred             CCCEEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhc-C-CCEEEEEecc
Q 025755           77 GCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKA-K-VKRVVVVSSI  129 (248)
Q Consensus        77 ~id~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~-~-~~~iV~vSS~  129 (248)
                      ++|+||-.||.....  ...-.+.++.|..-.+.+.+.+.+. . -..++.+|-.
T Consensus       108 daDvVVitag~prkp--G~tR~DLl~~N~~I~k~i~~~i~~~a~p~~ivlVvsNP  160 (375)
T 7mdh_A          108 DVDWALLIGAKPRGP--GMERAALLDINGQIFADQGKALNAVASKNVKVLVVGNP  160 (375)
T ss_dssp             TCSEEEECCCCCCCT--TCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSS
T ss_pred             CCCEEEEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCc
Confidence            999999999864322  1222578899999999999998874 3 3566666653

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=97.06  E-value=0.0018  Score=54.42  Aligned_cols=74  Identities=14%  Similarity=-0.039  Sum_probs=52.6

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhh-hhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEE
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLK-KLEGASENLQLFKTDLLDYEALCAATAGCTGVFH   83 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~   83 (248)
                      .+.+|+|+|+ |++|...++.+...|++|++++++.++.  .... .+   ..+. .  .|..+.+.+.++..++|+||+
T Consensus       180 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~--~~~~~~l---Ga~~-v--i~~~~~~~~~~~~~g~D~vid  250 (357)
T 2cf5_A          180 PGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSNKKR--EEALQDL---GADD-Y--VIGSDQAKMSELADSLDYVID  250 (357)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSTTHH--HHHHTTS---CCSC-E--EETTCHHHHHHSTTTEEEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCChHHH--HHHHHHc---CCce-e--eccccHHHHHHhcCCCCEEEE
Confidence            5789999995 9999999998888899999999876421  1112 22   1111 1  344556667766668999999


Q ss_pred             cccc
Q 025755           84 VACP   87 (248)
Q Consensus        84 ~ag~   87 (248)
                      ++|.
T Consensus       251 ~~g~  254 (357)
T 2cf5_A          251 TVPV  254 (357)
T ss_dssp             CCCS
T ss_pred             CCCC
Confidence            9974

>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*

Probab=97.06  E-value=0.0067  Score=49.90  Aligned_cols=112  Identities=17%  Similarity=0.031  Sum_probs=70.2

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHC--CCeEEEEEcCCCchhhHHhhhhcCC----CCCeEEEEccCCCHHHHHHHhCCCCE
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLK--GYMVHGTVRDPCDEKNAHLKKLEGA----SENLQLFKTDLLDYEALCAATAGCTG   80 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~--g~~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~~Di~d~~~~~~~~~~id~   80 (248)
                      ++|.|+|+ |.+|..++..|+..  |++|++++++........ ..+...    .....+...  .|.+   . ++++|+
T Consensus         1 mkI~VIGa-G~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~-~~l~~~~~~~~~~~~i~~t--~d~~---~-l~~aDv   72 (310)
T 1guz_A            1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKA-LDMYESGPVGLFDTKVTGS--NDYA---D-TANSDI   72 (310)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHH-HHHHTTHHHHTCCCEEEEE--SCGG---G-GTTCSE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHH-HhHHhhhhcccCCcEEEEC--CCHH---H-HCCCCE
Confidence            47999998 99999999999985  799999999875332111 111110    111122111  2222   2 678999


Q ss_pred             EEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCC-CEEEEEec
Q 025755           81 VFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKV-KRVVVVSS  128 (248)
Q Consensus        81 vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~-~~iV~vSS  128 (248)
                      ||-+++.....  ...-.++++.|+.....+.+.+.+... ..+|.+|-
T Consensus        73 Viiav~~p~~~--g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~viv~tN  119 (310)
T 1guz_A           73 VIITAGLPRKP--GMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVVSN  119 (310)
T ss_dssp             EEECCSCCCCT--TCCHHHHHHHHHHHHHHHHHHHHHHCSSCEEEECCS
T ss_pred             EEEeCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEcC
Confidence            99999753221  112245677888888888888877743 45566643

>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A

Probab=97.04  E-value=0.001  Score=53.42  Aligned_cols=56  Identities=14%  Similarity=0.091  Sum_probs=46.7

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEE
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFH   83 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~   83 (248)
                      +.||+++|.|+++-+|+.++..|+..|++|+++.+..                            .++.+.++..|+||.
T Consensus       148 l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~t----------------------------~~L~~~~~~ADIVI~  199 (276)
T 3ngx_A          148 YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSKT----------------------------KDIGSMTRSSKIVVV  199 (276)
T ss_dssp             CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC----------------------------SCHHHHHHHSSEEEE
T ss_pred             cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCCc----------------------------ccHHHhhccCCEEEE
Confidence            6799999999999999999999999999999886532                            234456667899998


Q ss_pred             cccc
Q 025755           84 VACP   87 (248)
Q Consensus        84 ~ag~   87 (248)
                      ..|.
T Consensus       200 Avg~  203 (276)
T 3ngx_A          200 AVGR  203 (276)
T ss_dssp             CSSC
T ss_pred             CCCC
Confidence            8874

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=97.04  E-value=0.00089  Score=56.00  Aligned_cols=97  Identities=14%  Similarity=0.131  Sum_probs=61.7

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCC-eEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCH---HHHHHHhC--CC
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGY-MVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDY---EALCAATA--GC   78 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~---~~~~~~~~--~i   78 (248)
                      .+++|+|+|+ |++|..+++.+...|+ +|++++++..  ..+..+.+.   .+ ..  .|..+.   +.+.++..  ++
T Consensus       167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~--~~~~~~~~G---a~-~~--~~~~~~~~~~~v~~~~~g~g~  237 (348)
T 2d8a_A          167 SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDF--RRELAKKVG---AD-YV--INPFEEDVVKEVMDITDGNGV  237 (348)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHH--HHHHHHHHT---CS-EE--ECTTTSCHHHHHHHHTTTSCE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHH--HHHHHHHhC---CC-EE--ECCCCcCHHHHHHHHcCCCCC
Confidence            5789999999 9999999999988999 9999988753  222222221   11 12  244332   23444433  58


Q ss_pred             CEEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEecc
Q 025755           79 TGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSI  129 (248)
Q Consensus        79 d~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~  129 (248)
                      |+||+++|..                 ......++.+++  .+++|.+++.
T Consensus       238 D~vid~~g~~-----------------~~~~~~~~~l~~--~G~iv~~g~~  269 (348)
T 2d8a_A          238 DVFLEFSGAP-----------------KALEQGLQAVTP--AGRVSLLGLY  269 (348)
T ss_dssp             EEEEECSCCH-----------------HHHHHHHHHEEE--EEEEEECCCC
T ss_pred             CEEEECCCCH-----------------HHHHHHHHHHhc--CCEEEEEccC
Confidence            9999998731                 112334444443  3599998864

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=97.03  E-value=0.0014  Score=52.41  Aligned_cols=105  Identities=18%  Similarity=0.191  Sum_probs=63.9

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCC-eEEEEEcCCCch-----------------h-hHHhhhhcCCCCCe--EEEE
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGY-MVHGTVRDPCDE-----------------K-NAHLKKLEGASENL--QLFK   62 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~-----------------~-~~~~~~~~~~~~~~--~~~~   62 (248)
                      +++++|+|.|+ |++|+++++.|+..|. ++++++++.-+.                 + ....+.+....+.+  ..+.
T Consensus        26 l~~~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~  104 (251)
T 1zud_1           26 LLDSQVLIIGL-GGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTALQ  104 (251)
T ss_dssp             HHTCEEEEECC-STTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEC
T ss_pred             HhcCcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEEEe
Confidence            45789999998 5599999999999996 778887654111                 1 11112222223344  3444


Q ss_pred             ccCCCHHHHHHHhCCCCEEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEec
Q 025755           63 TDLLDYEALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSS  128 (248)
Q Consensus        63 ~Di~d~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS  128 (248)
                      .++. .+.+..++++.|+||.+..                 |...-..+.+++.+.+. .+|+.+.
T Consensus       105 ~~~~-~~~~~~~~~~~DvVi~~~d-----------------~~~~r~~l~~~~~~~~~-p~i~~~~  151 (251)
T 1zud_1          105 QRLT-GEALKDAVARADVVLDCTD-----------------NMATRQEINAACVALNT-PLITASA  151 (251)
T ss_dssp             SCCC-HHHHHHHHHHCSEEEECCS-----------------SHHHHHHHHHHHHHTTC-CEEEEEE
T ss_pred             ccCC-HHHHHHHHhcCCEEEECCC-----------------CHHHHHHHHHHHHHhCC-CEEEEec
Confidence            4443 4567778888999998752                 11122345666676653 5666554

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=97.03  E-value=0.0013  Score=54.44  Aligned_cols=72  Identities=22%  Similarity=0.241  Sum_probs=45.9

Q ss_pred             EEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCH--HHHHHHh-CCCCEEEEc
Q 025755            8 RVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDY--EALCAAT-AGCTGVFHV   84 (248)
Q Consensus         8 ~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~--~~~~~~~-~~id~vi~~   84 (248)
                      +|+|+|++|++|..+++.+...|++|++++++.++.  +..+.+   ..+. .  .|..+.  +.++.+. .++|+||++
T Consensus       152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~--~~~~~l---Ga~~-~--i~~~~~~~~~~~~~~~~~~d~vid~  223 (328)
T 1xa0_A          152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEH--DYLRVL---GAKE-V--LAREDVMAERIRPLDKQRWAAAVDP  223 (328)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCH--HHHHHT---TCSE-E--EECC---------CCSCCEEEEEEC
T ss_pred             eEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHH--HHHHHc---CCcE-E--EecCCcHHHHHHHhcCCcccEEEEC
Confidence            799999999999999999988999999999876432  222322   1121 1  233332  2222222 258999999


Q ss_pred             ccc
Q 025755           85 ACP   87 (248)
Q Consensus        85 ag~   87 (248)
                      +|.
T Consensus       224 ~g~  226 (328)
T 1xa0_A          224 VGG  226 (328)
T ss_dssp             STT
T ss_pred             CcH
Confidence            874

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=97.02  E-value=0.0026  Score=51.86  Aligned_cols=106  Identities=12%  Similarity=0.064  Sum_probs=65.9

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCC-eEEEEEcCCCc----------------hhh-HHhhhhcCCCCC--eEEEEc
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGY-MVHGTVRDPCD----------------EKN-AHLKKLEGASEN--LQLFKT   63 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~-~V~~~~r~~~~----------------~~~-~~~~~~~~~~~~--~~~~~~   63 (248)
                      +++++|+|.|+ |++|+.+++.|++.|. ++++++++.-+                .+. ...+.+...++.  +..+..
T Consensus        34 L~~~~VlVvGa-GGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP~v~v~~~~~  112 (292)
T 3h8v_A           34 IRTFAVAIVGV-GGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDVLFEVHNY  112 (292)
T ss_dssp             GGGCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCTTSEEEEECC
T ss_pred             HhCCeEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCCCcEEEEecc
Confidence            56789999986 5699999999999994 88888876511                111 111222222333  555566


Q ss_pred             cCCCHHHHHHHh-----------CCCCEEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEec
Q 025755           64 DLLDYEALCAAT-----------AGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSS  128 (248)
Q Consensus        64 Di~d~~~~~~~~-----------~~id~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS  128 (248)
                      ++.+.+.+..++           ++.|+||.+.-                 |+..-..+.++|.+.+. .+|+.+.
T Consensus       113 ~l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~D-----------------n~~~R~~in~~c~~~~~-Pli~~gv  170 (292)
T 3h8v_A          113 NITTVENFQHFMDRISNGGLEEGKPVDLVLSCVD-----------------NFEARMTINTACNELGQ-TWMESGV  170 (292)
T ss_dssp             CTTSHHHHHHHHHHHHHBSSSTTBCCSEEEECCS-----------------SHHHHHHHHHHHHHHTC-CEEEEEE
T ss_pred             cCCcHHHHHHHhhhhcccccccCCCCCEEEECCc-----------------chhhhhHHHHHHHHhCC-CEEEeee
Confidence            777656666654           57899986651                 22223446667777664 5665543

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=96.99  E-value=0.0032  Score=52.90  Aligned_cols=77  Identities=16%  Similarity=0.029  Sum_probs=51.3

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCe-EEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHH----HHHh--CC
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYM-VHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEAL----CAAT--AG   77 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~----~~~~--~~   77 (248)
                      .+++|+|+|+ |++|...++.+...|++ |++++++..  +.+..+.+ .  +.+.....|-.+.+++    .++.  ++
T Consensus       179 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~--~~~~a~~l-~--~~~~~~~~~~~~~~~~~~~v~~~t~g~g  252 (363)
T 3m6i_A          179 LGDPVLICGA-GPIGLITMLCAKAAGACPLVITDIDEG--RLKFAKEI-C--PEVVTHKVERLSAEESAKKIVESFGGIE  252 (363)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCHH--HHHHHHHH-C--TTCEEEECCSCCHHHHHHHHHHHTSSCC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHH--HHHHHHHh-c--hhcccccccccchHHHHHHHHHHhCCCC
Confidence            4789999998 99999999998889997 888887753  33333333 2  2333333444443433    3333  26


Q ss_pred             CCEEEEcccc
Q 025755           78 CTGVFHVACP   87 (248)
Q Consensus        78 id~vi~~ag~   87 (248)
                      +|+||.++|.
T Consensus       253 ~Dvvid~~g~  262 (363)
T 3m6i_A          253 PAVALECTGV  262 (363)
T ss_dssp             CSEEEECSCC
T ss_pred             CCEEEECCCC
Confidence            8999999873

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=96.99  E-value=0.0011  Score=53.05  Aligned_cols=69  Identities=22%  Similarity=0.226  Sum_probs=48.7

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCC-eEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEE
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGY-MVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVF   82 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi   82 (248)
                      +++ +++|.|+ |+.|++++..|++.|+ +|++++|+.++     .+.+..   .+...     ..+++...+++.|+||
T Consensus       107 ~~~-~vliiGa-Gg~a~ai~~~L~~~G~~~I~v~nR~~~k-----a~~la~---~~~~~-----~~~~~~~~~~~aDiVI  171 (253)
T 3u62_A          107 VKE-PVVVVGA-GGAARAVIYALLQMGVKDIWVVNRTIER-----AKALDF---PVKIF-----SLDQLDEVVKKAKSLF  171 (253)
T ss_dssp             CCS-SEEEECC-SHHHHHHHHHHHHTTCCCEEEEESCHHH-----HHTCCS---SCEEE-----EGGGHHHHHHTCSEEE
T ss_pred             CCC-eEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHH-----HHHHHH---HcccC-----CHHHHHhhhcCCCEEE
Confidence            456 8999987 8899999999999998 89999998632     122211   12211     2244566677899999


Q ss_pred             Ecccc
Q 025755           83 HVACP   87 (248)
Q Consensus        83 ~~ag~   87 (248)
                      ++...
T Consensus       172 natp~  176 (253)
T 3u62_A          172 NTTSV  176 (253)
T ss_dssp             ECSST
T ss_pred             ECCCC
Confidence            98743

>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}

Probab=96.98  E-value=0.0043  Score=53.78  Aligned_cols=93  Identities=11%  Similarity=0.104  Sum_probs=60.1

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCC-C---eEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCC--CH-HHHHHHhCCCC
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKG-Y---MVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLL--DY-EALCAATAGCT   79 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g-~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~--d~-~~~~~~~~~id   79 (248)
                      ++|+|.| .|+||+.+++.++++. .   +|++.+.+...  ....+..     .+.+...+++  |. +.+.+++++.|
T Consensus        14 ~rVlIIG-aGgVG~~va~lla~~~dv~~~~I~vaD~~~~~--~~~~~~~-----g~~~~~~~Vdadnv~~~l~aLl~~~D   85 (480)
T 2ph5_A           14 NRFVILG-FGCVGQALMPLIFEKFDIKPSQVTIIAAEGTK--VDVAQQY-----GVSFKLQQITPQNYLEVIGSTLEEND   85 (480)
T ss_dssp             SCEEEEC-CSHHHHHHHHHHHHHBCCCGGGEEEEESSCCS--CCHHHHH-----TCEEEECCCCTTTHHHHTGGGCCTTC
T ss_pred             CCEEEEC-cCHHHHHHHHHHHhCCCCceeEEEEeccchhh--hhHHhhc-----CCceeEEeccchhHHHHHHHHhcCCC
Confidence            5799999 8999999999999864 4   68887765432  1212211     2455655654  44 33556777779


Q ss_pred             EEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEE
Q 025755           80 GVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVV  126 (248)
Q Consensus        80 ~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~v  126 (248)
                      +|||.+ ...                 ....++++|.+.|+ ..|-+
T Consensus        86 vVIN~s-~~~-----------------~~l~Im~acleaGv-~YlDT  113 (480)
T 2ph5_A           86 FLIDVS-IGI-----------------SSLALIILCNQKGA-LYINA  113 (480)
T ss_dssp             EEEECC-SSS-----------------CHHHHHHHHHHHTC-EEEES
T ss_pred             EEEECC-ccc-----------------cCHHHHHHHHHcCC-CEEEC
Confidence            999854 211                 14568999999875 44433

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A

Probab=96.96  E-value=0.00074  Score=54.68  Aligned_cols=72  Identities=14%  Similarity=0.047  Sum_probs=48.9

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEE
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFH   83 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~   83 (248)
                      +++++++|.|+ |++|++++..|++.|++|++++|+.+.. ..    +.... .+..  .+     ++...++++|+||+
T Consensus       127 ~~~~~v~iiGa-G~~g~aia~~L~~~g~~V~v~~r~~~~~-~~----l~~~~-g~~~--~~-----~~~~~~~~aDiVi~  192 (275)
T 2hk9_A          127 VKEKSILVLGA-GGASRAVIYALVKEGAKVFLWNRTKEKA-IK----LAQKF-PLEV--VN-----SPEEVIDKVQVIVN  192 (275)
T ss_dssp             GGGSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSHHHH-HH----HTTTS-CEEE--CS-----CGGGTGGGCSEEEE
T ss_pred             cCCCEEEEECc-hHHHHHHHHHHHHcCCEEEEEECCHHHH-HH----HHHHc-CCee--eh-----hHHhhhcCCCEEEE
Confidence            56789999996 7899999999999999999998875321 11    11111 1221  21     23345568999999


Q ss_pred             ccccCC
Q 025755           84 VACPVP   89 (248)
Q Consensus        84 ~ag~~~   89 (248)
                      +.....
T Consensus       193 atp~~~  198 (275)
T 2hk9_A          193 TTSVGL  198 (275)
T ss_dssp             CSSTTS
T ss_pred             eCCCCC
Confidence            986543

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=96.95  E-value=0.0021  Score=52.98  Aligned_cols=81  Identities=11%  Similarity=-0.029  Sum_probs=55.7

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCe-EEEEccCCCHHHHHHHhCCCCEE
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENL-QLFKTDLLDYEALCAATAGCTGV   81 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~Di~d~~~~~~~~~~id~v   81 (248)
                      ++.+++++|.|++.-+|+.+++.|+..|++|++++|+..... .....+.   ... .......++.+++.+.+++.|+|
T Consensus       174 ~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~-~ra~~la---~~~~~~t~~~~t~~~~L~e~l~~ADIV  249 (320)
T 1edz_A          174 RLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKF-TRGESLK---LNKHHVEDLGEYSEDLLKKCSLDSDVV  249 (320)
T ss_dssp             TTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEE-ESCCCSS---CCCCEEEEEEECCHHHHHHHHHHCSEE
T ss_pred             CCCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHH-hHHHHHh---hhcccccccccccHhHHHHHhccCCEE
Confidence            468999999999999999999999999999999988742110 0001111   111 11111114457888888999999


Q ss_pred             EEcccc
Q 025755           82 FHVACP   87 (248)
Q Consensus        82 i~~ag~   87 (248)
                      |.+.|.
T Consensus       250 IsAtg~  255 (320)
T 1edz_A          250 ITGVPS  255 (320)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            988875

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=96.95  E-value=0.0027  Score=53.90  Aligned_cols=37  Identities=22%  Similarity=0.096  Sum_probs=33.2

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCC
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPC   41 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~   41 (248)
                      +.+++|+|+|+ |.+|..+++.+...|++|++++++..
T Consensus       170 l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~~~d~~~~  206 (384)
T 1l7d_A          170 VPPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAA  206 (384)
T ss_dssp             ECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCST
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence            46899999996 89999999999999999999998864

>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1

Probab=96.94  E-value=0.0082  Score=49.31  Aligned_cols=111  Identities=13%  Similarity=0.101  Sum_probs=68.8

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCC--CeEEEEEcCCCchhhHH--hhhhcC-CCCCeEEEEccCCCHHHHHHHhCCCCEE
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKG--YMVHGTVRDPCDEKNAH--LKKLEG-ASENLQLFKTDLLDYEALCAATAGCTGV   81 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g--~~V~~~~r~~~~~~~~~--~~~~~~-~~~~~~~~~~Di~d~~~~~~~~~~id~v   81 (248)
                      ++|.|+| +|.+|..++..|++.|  ++|++++++........  ...... ....+.....|   .    ..++++|+|
T Consensus         2 ~kI~VIG-aG~~G~~la~~L~~~g~~~~V~l~d~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d---~----~~~~~aDvV   73 (309)
T 1hyh_A            2 RKIGIIG-LGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVIND---W----AALADADVV   73 (309)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESC---G----GGGTTCSEE
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhCCCCCEEEEEcCCHHHHHHHHHHHHhhhhhcCCCeEEEeCC---H----HHhCCCCEE
Confidence            5899999 7999999999999999  79999999763221111  110100 11123332222   2    346789999


Q ss_pred             EEccccCCC----CCCCCccccchhhhHHHHHHHHHHHHhcCCC-EEEEEe
Q 025755           82 FHVACPVPV----GKVPNPEVQLIDPAVVGTKNVLNSCVKAKVK-RVVVVS  127 (248)
Q Consensus        82 i~~ag~~~~----~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~-~iV~vS  127 (248)
                      |-+++....    ..  ..-.+++..|+.....+++.+.+.... .+|.+|
T Consensus        74 iiav~~~~~~~~~~g--~~r~~l~~~n~~i~~~i~~~i~~~~~~~~ii~~t  122 (309)
T 1hyh_A           74 ISTLGNIKLQQDNPT--GDRFAELKFTSSMVQSVGTNLKESGFHGVLVVIS  122 (309)
T ss_dssp             EECCSCGGGTC---------CTTHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             EEecCCcccCCCCCC--CCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEc
Confidence            999876431    11  112456778888888888888776433 444443

>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}

Probab=96.92  E-value=0.0043  Score=52.39  Aligned_cols=69  Identities=12%  Similarity=0.143  Sum_probs=52.5

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEEc
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFHV   84 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~~   84 (248)
                      ||+|+|+|+ |..|+.+++.+.+.|++|++++.+.......    .    .+ ..+..|..|.+.+.++++++|.|+..
T Consensus         1 M~~Ililg~-g~~g~~~~~a~~~~G~~v~~~~~~~~~~~~~----~----~~-~~~~~~~~d~~~l~~~~~~~d~v~~~   69 (380)
T 3ax6_A            1 MKKIGIIGG-GQLGKMMTLEAKKMGFYVIVLDPTPRSPAGQ----V----AD-EQIVAGFFDSERIEDLVKGSDVTTYD   69 (380)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSTTCTTGG----G----SS-EEEECCTTCHHHHHHHHHTCSEEEES
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCchhh----h----Cc-eEEECCCCCHHHHHHHHhcCCEEEec
Confidence            479999997 5799999999999999999988764321111    1    11 34568899999999988899998753

>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*

Probab=96.91  E-value=0.0026  Score=51.75  Aligned_cols=57  Identities=11%  Similarity=0.005  Sum_probs=48.2

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEE
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVF   82 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi   82 (248)
                      ++.+++++|.|++.-+|+.++..|+..|++|+++.+..                            .++.+.++..|+||
T Consensus       162 ~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t----------------------------~~L~~~~~~ADIVI  213 (301)
T 1a4i_A          162 PIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKT----------------------------AHLDEEVNKGDILV  213 (301)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC----------------------------SSHHHHHTTCSEEE
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEECCc----------------------------ccHHHHhccCCEEE
Confidence            36899999999999999999999999999999875332                            24667778899999


Q ss_pred             Ecccc
Q 025755           83 HVACP   87 (248)
Q Consensus        83 ~~ag~   87 (248)
                      ...|.
T Consensus       214 ~Avg~  218 (301)
T 1a4i_A          214 VATGQ  218 (301)
T ss_dssp             ECCCC
T ss_pred             ECCCC
Confidence            88875

>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}

Probab=96.91  E-value=0.0021  Score=51.92  Aligned_cols=37  Identities=19%  Similarity=0.338  Sum_probs=29.4

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHC-CCeEEEE-EcCC
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLK-GYMVHGT-VRDP   40 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~-g~~V~~~-~r~~   40 (248)
                      |+|.+|.|+|++|.+|+.+++.+.+. +++++.. +|+.
T Consensus         5 M~mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~   43 (272)
T 4f3y_A            5 MSSMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTG   43 (272)
T ss_dssp             -CCEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTT
T ss_pred             ccccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecC
Confidence            45689999999999999999999875 5677764 5553

>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1

Probab=96.89  E-value=0.0086  Score=49.48  Aligned_cols=112  Identities=19%  Similarity=0.172  Sum_probs=69.7

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCCC--eEEEEEcCCCchhhHH--hhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEE
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKGY--MVHGTVRDPCDEKNAH--LKKLEGASENLQLFKTDLLDYEALCAATAGCTGVF   82 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g~--~V~~~~r~~~~~~~~~--~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi   82 (248)
                      ++|.|+|+ |.+|..++..|+..|+  +|++++++........  +...........+..   +|.+    .++++|+||
T Consensus         1 mkI~VIGa-G~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~i~~---~d~~----~~~~aDvVi   72 (319)
T 1a5z_A            1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYA---GDYA----DLKGSDVVI   72 (319)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEE---CCGG----GGTTCSEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHhhhhhcCCcEEEe---CCHH----HhCCCCEEE
Confidence            47999998 9999999999999999  9999998753221111  111111111222222   2322    367899999


Q ss_pred             EccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCC-CEEEEEec
Q 025755           83 HVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKV-KRVVVVSS  128 (248)
Q Consensus        83 ~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~-~~iV~vSS  128 (248)
                      .+++.....  ...-.++...|+.....+++.+.+... ..+|.+|-
T Consensus        73 iav~~~~~~--g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~ii~~tN  117 (319)
T 1a5z_A           73 VAAGVPQKP--GETRLQLLGRNARVMKEIARNVSKYAPDSIVIVVTN  117 (319)
T ss_dssp             ECCCCCCCS--SCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred             EccCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeCC
Confidence            998764421  111245667788888888888877633 35555543

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=96.89  E-value=0.0027  Score=53.42  Aligned_cols=99  Identities=19%  Similarity=0.151  Sum_probs=62.0

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCC-HHHHHHHhC--CCCEE
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLD-YEALCAATA--GCTGV   81 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d-~~~~~~~~~--~id~v   81 (248)
                      .+++|+|+| +|++|...++.+...|++|++++++..+  .+..+.+.   .+ ..+.-+-.+ .+.+.++..  ++|+|
T Consensus       189 ~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~--~~~~~~lG---a~-~vi~~~~~~~~~~v~~~~~g~g~D~v  261 (363)
T 3uog_A          189 AGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREK--LDRAFALG---AD-HGINRLEEDWVERVYALTGDRGADHI  261 (363)
T ss_dssp             TTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEESCHHH--HHHHHHHT---CS-EEEETTTSCHHHHHHHHHTTCCEEEE
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEecCchh--HHHHHHcC---CC-EEEcCCcccHHHHHHHHhCCCCceEE
Confidence            478999999 8999999999999999999999987532  22233321   12 122222122 234555443  68999


Q ss_pred             EEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccc
Q 025755           82 FHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIG  130 (248)
Q Consensus        82 i~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~  130 (248)
                      |+++|.  .     .           ....++.+++  .+++|.++...
T Consensus       262 id~~g~--~-----~-----------~~~~~~~l~~--~G~iv~~G~~~  290 (363)
T 3uog_A          262 LEIAGG--A-----G-----------LGQSLKAVAP--DGRISVIGVLE  290 (363)
T ss_dssp             EEETTS--S-----C-----------HHHHHHHEEE--EEEEEEECCCS
T ss_pred             EECCCh--H-----H-----------HHHHHHHhhc--CCEEEEEecCC
Confidence            999982  1     0           1234444444  36899987643

>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A

Probab=96.89  E-value=0.0027  Score=53.37  Aligned_cols=99  Identities=16%  Similarity=0.145  Sum_probs=58.0

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCC-eEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEE
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGY-MVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFH   83 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~   83 (248)
                      ++.+|.|.||+|.+|+.+++.|.++.. +++.+.+..+... ..........+.+   ..|+...+  ...++++|+|+.
T Consensus        15 ~~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~~~~g~-~~~~~~~~~~~~v---~~dl~~~~--~~~~~~vDvVf~   88 (359)
T 1xyg_A           15 KDIRIGLLGASGYTGAEIVRLLANHPHFQVTLMTADRKAGQ-SMESVFPHLRAQK---LPTLVSVK--DADFSTVDAVFC   88 (359)
T ss_dssp             CCEEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCSTTTTS-CHHHHCGGGTTSC---CCCCBCGG--GCCGGGCSEEEE
T ss_pred             cCcEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCchhcCC-CHHHhCchhcCcc---cccceecc--hhHhcCCCEEEE
Confidence            346899999999999999999998764 7776654332211 1111111001111   13332222  334568999998


Q ss_pred             ccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEecc
Q 025755           84 VACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSI  129 (248)
Q Consensus        84 ~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~  129 (248)
                      |++...                  +...++.+ +.|. ++|-.|+.
T Consensus        89 atp~~~------------------s~~~a~~~-~aG~-~VId~sa~  114 (359)
T 1xyg_A           89 CLPHGT------------------TQEIIKEL-PTAL-KIVDLSAD  114 (359)
T ss_dssp             CCCTTT------------------HHHHHHTS-CTTC-EEEECSST
T ss_pred             cCCchh------------------HHHHHHHH-hCCC-EEEECCcc
Confidence            885422                  23456666 5554 68878774

>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A

Probab=96.88  E-value=0.01  Score=48.63  Aligned_cols=109  Identities=15%  Similarity=0.128  Sum_probs=69.5

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCC--eEEEEEcCCCchh--hHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCE
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGY--MVHGTVRDPCDEK--NAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTG   80 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~--~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~   80 (248)
                      .+++|.|+|+ |.+|..++..|+..|.  +|++++.+.. ..  ...+..+.  .+++... .|      . ..++++|+
T Consensus        13 ~~~kV~ViGa-G~vG~~~a~~l~~~g~~~ev~L~Di~~~-~~g~a~dl~~~~--~~~i~~t-~d------~-~~l~~aD~   80 (303)
T 2i6t_A           13 TVNKITVVGG-GELGIACTLAISAKGIADRLVLLDLSEG-TKGATMDLEIFN--LPNVEIS-KD------L-SASAHSKV   80 (303)
T ss_dssp             -CCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECCC------CHHHHHHHT--CTTEEEE-SC------G-GGGTTCSE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEcCCcc-hHHHHHHHhhhc--CCCeEEe-CC------H-HHHCCCCE
Confidence            3579999996 8999999999999998  9999998763 21  11111111  1345442 22      2 34789999


Q ss_pred             EEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCC-CEEEEEec
Q 025755           81 VFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKV-KRVVVVSS  128 (248)
Q Consensus        81 vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~-~~iV~vSS  128 (248)
                      ||-.+|...+   ...-.+++..|+.-.+.+.+.+.+... ..++++|-
T Consensus        81 Vi~aag~~~p---G~tR~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~sN  126 (303)
T 2i6t_A           81 VIFTVNSLGS---SQSYLDVVQSNVDMFRALVPALGHYSQHSVLLVASQ  126 (303)
T ss_dssp             EEECCCC-------CCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEECSS
T ss_pred             EEEcCCCCCC---CCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcCC
Confidence            9999987322   122245677888888888888877643 34555554

>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6

Probab=96.87  E-value=0.0021  Score=52.60  Aligned_cols=36  Identities=19%  Similarity=0.399  Sum_probs=32.8

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCC
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPC   41 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~   41 (248)
                      +++|.|.||.|.+|..++..|.+.|++|++++|+..
T Consensus        21 ~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~   56 (298)
T 2pv7_A           21 IHKIVIVGGYGKLGGLFARYLRASGYPISILDREDW   56 (298)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCG
T ss_pred             CCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCcc
Confidence            468999999999999999999999999999988753

>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A

Probab=96.87  E-value=0.0094  Score=49.05  Aligned_cols=112  Identities=18%  Similarity=0.142  Sum_probs=73.6

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCC--CeEEEEEcCCCchhhHHhhhhcC---CCCCeEEEEccCCCHHHHHHHhCCCCEE
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKG--YMVHGTVRDPCDEKNAHLKKLEG---ASENLQLFKTDLLDYEALCAATAGCTGV   81 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~~Di~d~~~~~~~~~~id~v   81 (248)
                      +||.|+|+ |.+|..++..|+..+  .++++++++..... .....+..   ...++.+.. +  +    .+.++++|+|
T Consensus         1 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~k~~-g~a~dl~~~~~~~~~~~v~~-~--~----~~a~~~aD~V   71 (310)
T 2xxj_A            1 MKVGIVGS-GMVGSATAYALALLGVAREVVLVDLDRKLAQ-AHAEDILHATPFAHPVWVWA-G--S----YGDLEGARAV   71 (310)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHH-HHHHHHHTTGGGSCCCEEEE-C--C----GGGGTTEEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHH-HHHHHHHHhHhhcCCeEEEE-C--C----HHHhCCCCEE
Confidence            48999998 999999999999887  58999998753221 11112211   112344443 2  2    2347899999


Q ss_pred             EEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCC-CEEEEEecc
Q 025755           82 FHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKV-KRVVVVSSI  129 (248)
Q Consensus        82 i~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~-~~iV~vSS~  129 (248)
                      |..+|......  ..-.+++..|......+.+.+.+... ..+|.+|-.
T Consensus        72 ii~ag~~~~~g--~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNP  118 (310)
T 2xxj_A           72 VLAAGVAQRPG--ETRLQLLDRNAQVFAQVVPRVLEAAPEAVLLVATNP  118 (310)
T ss_dssp             EECCCCCCCTT--CCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSS
T ss_pred             EECCCCCCCCC--cCHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEecCc
Confidence            99998644321  12245678888888899998888743 466666543

>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}

Probab=96.87  E-value=0.0021  Score=53.73  Aligned_cols=96  Identities=15%  Similarity=0.119  Sum_probs=57.5

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCC-eEEEEEcCCCchhh-HH-hhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEE
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGY-MVHGTVRDPCDEKN-AH-LKKLEGASENLQLFKTDLLDYEALCAATAGCTGV   81 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~-~~-~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~v   81 (248)
                      ++++|.|.||+|.+|+.+++.|.++.. +++.+.+....... .. ...+... .+     ..+.+.+   . +.++|+|
T Consensus         3 ~~~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~~~~g~~~~~~~~~~~g~-~~-----~~~~~~~---~-~~~vDvV   72 (345)
T 2ozp_A            3 GKKTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSRRFAGEPVHFVHPNLRGR-TN-----LKFVPPE---K-LEPADIL   72 (345)
T ss_dssp             -CEEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCSTTTTSBGGGTCGGGTTT-CC-----CBCBCGG---G-CCCCSEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECchhhCchhHHhCchhcCc-cc-----ccccchh---H-hcCCCEE
Confidence            357999999999999999999988764 77766553322111 10 0001100 11     1122322   2 4789999


Q ss_pred             EEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEecc
Q 025755           82 FHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSI  129 (248)
Q Consensus        82 i~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~  129 (248)
                      +.+++...                  +..+++.+.+.|. ++|-.|+.
T Consensus        73 ~~a~g~~~------------------s~~~a~~~~~aG~-~VId~Sa~  101 (345)
T 2ozp_A           73 VLALPHGV------------------FAREFDRYSALAP-VLVDLSAD  101 (345)
T ss_dssp             EECCCTTH------------------HHHTHHHHHTTCS-EEEECSST
T ss_pred             EEcCCcHH------------------HHHHHHHHHHCCC-EEEEcCcc
Confidence            99885421                  3456666666665 68888874

>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}

Probab=96.86  E-value=0.0035  Score=49.02  Aligned_cols=71  Identities=18%  Similarity=0.193  Sum_probs=50.2

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEE
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVF   82 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi   82 (248)
                      ++++|+|||.|| |-+|...++.|++.|++|++++.+..+.    ++.+.. ..++.++..+..+ ++    +.++|.||
T Consensus        28 ~L~gk~VLVVGg-G~va~~ka~~Ll~~GA~VtVvap~~~~~----l~~l~~-~~~i~~i~~~~~~-~d----L~~adLVI   96 (223)
T 3dfz_A           28 DLKGRSVLVVGG-GTIATRRIKGFLQEGAAITVVAPTVSAE----INEWEA-KGQLRVKRKKVGE-ED----LLNVFFIV   96 (223)
T ss_dssp             CCTTCCEEEECC-SHHHHHHHHHHGGGCCCEEEECSSCCHH----HHHHHH-TTSCEEECSCCCG-GG----SSSCSEEE
T ss_pred             EcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCCCCHH----HHHHHH-cCCcEEEECCCCH-hH----hCCCCEEE
Confidence            478999999997 5799999999999999999998765322    222211 2467777665543 22    45788888


Q ss_pred             Ec
Q 025755           83 HV   84 (248)
Q Consensus        83 ~~   84 (248)
                      -+
T Consensus        97 aA   98 (223)
T 3dfz_A           97 VA   98 (223)
T ss_dssp             EC
T ss_pred             EC
Confidence            44

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=96.86  E-value=0.0021  Score=53.68  Aligned_cols=69  Identities=17%  Similarity=0.151  Sum_probs=48.4

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEEc
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFHV   84 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~~   84 (248)
                      .+.+|+|+|+ |++|...++.+...|++|++++++..+.  +..+.+   ..+. .+    .+.+.+.   +++|+||++
T Consensus       176 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~--~~~~~l---Ga~~-v~----~~~~~~~---~~~D~vid~  241 (348)
T 3two_A          176 KGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKK--QDALSM---GVKH-FY----TDPKQCK---EELDFIIST  241 (348)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTTH--HHHHHT---TCSE-EE----SSGGGCC---SCEEEEEEC
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHH--HHHHhc---CCCe-ec----CCHHHHh---cCCCEEEEC
Confidence            5789999997 9999999999988999999998877532  223332   1222 22    3333332   289999999


Q ss_pred             ccc
Q 025755           85 ACP   87 (248)
Q Consensus        85 ag~   87 (248)
                      +|.
T Consensus       242 ~g~  244 (348)
T 3two_A          242 IPT  244 (348)
T ss_dssp             CCS
T ss_pred             CCc
Confidence            874

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=96.85  E-value=0.0031  Score=52.50  Aligned_cols=73  Identities=22%  Similarity=0.250  Sum_probs=48.8

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCH---HHHHHHhCCCCEE
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDY---EALCAATAGCTGV   81 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~---~~~~~~~~~id~v   81 (248)
                      .+++|+|+|+ |++|...++.+...|++|++++++.+  ..+..+.+   ..+. .  .|..+.   +.+.+...++|+|
T Consensus       166 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~--~~~~~~~l---Ga~~-~--i~~~~~~~~~~~~~~~g~~d~v  236 (340)
T 3s2e_A          166 PGQWVVISGI-GGLGHVAVQYARAMGLRVAAVDIDDA--KLNLARRL---GAEV-A--VNARDTDPAAWLQKEIGGAHGV  236 (340)
T ss_dssp             TTSEEEEECC-STTHHHHHHHHHHTTCEEEEEESCHH--HHHHHHHT---TCSE-E--EETTTSCHHHHHHHHHSSEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCCHH--HHHHHHHc---CCCE-E--EeCCCcCHHHHHHHhCCCCCEE
Confidence            5789999997 88999999999999999999988763  22223332   1121 2  233332   2344433478999


Q ss_pred             EEccc
Q 025755           82 FHVAC   86 (248)
Q Consensus        82 i~~ag   86 (248)
                      |.+++
T Consensus       237 id~~g  241 (340)
T 3s2e_A          237 LVTAV  241 (340)
T ss_dssp             EESSC
T ss_pred             EEeCC
Confidence            99876

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=96.84  E-value=0.0019  Score=54.56  Aligned_cols=75  Identities=16%  Similarity=0.076  Sum_probs=52.4

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccC------------------C
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDL------------------L   66 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di------------------~   66 (248)
                      .+++|+|+|+ |.+|..+++.+...|++|++++|+....  ...+.+     ...++..|+                  .
T Consensus       183 ~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l--~~~~~l-----Ga~~~~l~~~~~~~~gya~~~~~~~~~~  254 (381)
T 3p2y_A          183 KPASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEVA--EQVRSV-----GAQWLDLGIDAAGEGGYARELSEAERAQ  254 (381)
T ss_dssp             CCCEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGGH--HHHHHT-----TCEECCCC-------------CHHHHHH
T ss_pred             CCCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHH--HHHHHc-----CCeEEeccccccccccchhhhhHHHHhh
Confidence            5789999998 7999999999999999999999987422  122221     122222211                  1


Q ss_pred             CHHHHHHHhCCCCEEEEcccc
Q 025755           67 DYEALCAATAGCTGVFHVACP   87 (248)
Q Consensus        67 d~~~~~~~~~~id~vi~~ag~   87 (248)
                      +.+.+.+++++.|+||.++..
T Consensus       255 ~~~~l~e~l~~aDIVI~tv~i  275 (381)
T 3p2y_A          255 QQQALEDAITKFDIVITTALV  275 (381)
T ss_dssp             HHHHHHHHHTTCSEEEECCCC
T ss_pred             hHHHHHHHHhcCCEEEECCCC
Confidence            235677888899999988744

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=96.79  E-value=0.0026  Score=54.39  Aligned_cols=37  Identities=22%  Similarity=0.127  Sum_probs=33.1

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCC
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPC   41 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~   41 (248)
                      +.+++|+|+|+ |.+|..+++.+...|++|++++++..
T Consensus       170 l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~v~D~~~~  206 (401)
T 1x13_A          170 VPPAKVMVIGA-GVAGLAAIGAANSLGAIVRAFDTRPE  206 (401)
T ss_dssp             ECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCGG
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence            45789999996 89999999999999999999998864

>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*

Probab=96.77  E-value=0.0058  Score=51.86  Aligned_cols=69  Identities=10%  Similarity=0.006  Sum_probs=52.7

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEE
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVF   82 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi   82 (248)
                      +.+|+|+|.|++. +|+.+++.+.+.|++|++++.+.......        ..+ ..+..|..|.+.+.++.+.+|+|.
T Consensus        12 ~~~k~IlIlG~G~-~g~~la~aa~~~G~~vi~~d~~~~~~~~~--------~ad-~~~~~~~~d~~~l~~~~~~~dvI~   80 (389)
T 3q2o_A           12 LPGKTIGIIGGGQ-LGRMMALAAKEMGYKIAVLDPTKNSPCAQ--------VAD-IEIVASYDDLKAIQHLAEISDVVT   80 (389)
T ss_dssp             CTTSEEEEECCSH-HHHHHHHHHHHTTCEEEEEESSTTCTTTT--------TCS-EEEECCTTCHHHHHHHHHTCSEEE
T ss_pred             CCCCEEEEECCCH-HHHHHHHHHHHcCCEEEEEeCCCCCchHH--------hCC-ceEecCcCCHHHHHHHHHhCCEee
Confidence            5689999998664 99999999999999999998765321111        011 245588899999999999999874

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=96.75  E-value=0.0047  Score=52.56  Aligned_cols=76  Identities=16%  Similarity=0.131  Sum_probs=52.9

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEcc----------------CCCH
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTD----------------LLDY   68 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D----------------i~d~   68 (248)
                      .+.+|+|+|+ |.+|..+++.+...|++|++++++....  ...+.+     ...++..+                +++.
T Consensus       189 ~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l--~~~~~~-----G~~~~~~~~~~~~d~~~~~~ya~e~s~~  260 (405)
T 4dio_A          189 PAAKIFVMGA-GVAGLQAIATARRLGAVVSATDVRPAAK--EQVASL-----GAKFIAVEDEEFKAAETAGGYAKEMSGE  260 (405)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSTTHH--HHHHHT-----TCEECCCCC-----------------CH
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHH--HHHHHc-----CCceeecccccccccccccchhhhcchh
Confidence            4679999999 7999999999999999999999987532  122221     11122111                2332


Q ss_pred             ------HHHHHHhCCCCEEEEccccC
Q 025755           69 ------EALCAATAGCTGVFHVACPV   88 (248)
Q Consensus        69 ------~~~~~~~~~id~vi~~ag~~   88 (248)
                            +.+.+++++.|+||.++...
T Consensus       261 ~~~~~~~~l~e~l~~aDVVI~tvlip  286 (405)
T 4dio_A          261 YQVKQAALVAEHIAKQDIVITTALIP  286 (405)
T ss_dssp             HHHHHHHHHHHHHHTCSEEEECCCCS
T ss_pred             hhhhhHhHHHHHhcCCCEEEECCcCC
Confidence                  47888888999999987644

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=96.75  E-value=0.0099  Score=50.09  Aligned_cols=75  Identities=19%  Similarity=0.178  Sum_probs=49.7

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCH---HHHHHHhC-CCC
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDY---EALCAATA-GCT   79 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~---~~~~~~~~-~id   79 (248)
                      ..+++|+|+|++|++|...++.+...|++|+++. +..  +.+..+.+   ... ..+  |..+.   +.+.++.. ++|
T Consensus       163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~--~~~~~~~l---Ga~-~vi--~~~~~~~~~~v~~~t~g~~d  233 (371)
T 3gqv_A          163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPH--NFDLAKSR---GAE-EVF--DYRAPNLAQTIRTYTKNNLR  233 (371)
T ss_dssp             SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGG--GHHHHHHT---TCS-EEE--ETTSTTHHHHHHHHTTTCCC
T ss_pred             CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHH--HHHHHHHc---CCc-EEE--ECCCchHHHHHHHHccCCcc
Confidence            4578999999999999999999999999999886 432  22333332   111 222  33332   33444432 589


Q ss_pred             EEEEcccc
Q 025755           80 GVFHVACP   87 (248)
Q Consensus        80 ~vi~~ag~   87 (248)
                      ++|.++|.
T Consensus       234 ~v~d~~g~  241 (371)
T 3gqv_A          234 YALDCITN  241 (371)
T ss_dssp             EEEESSCS
T ss_pred             EEEECCCc
Confidence            99999874

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=96.75  E-value=0.0027  Score=53.29  Aligned_cols=79  Identities=11%  Similarity=0.065  Sum_probs=50.1

Q ss_pred             CC-cEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCch--hhHHhhhhcCCCCCeEEEEc-cC--CC-HHHHHHHh--
Q 025755            5 DK-ERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDE--KNAHLKKLEGASENLQLFKT-DL--LD-YEALCAAT--   75 (248)
Q Consensus         5 ~~-k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~~-Di--~d-~~~~~~~~--   75 (248)
                      .+ .+|+|+|++|++|...++.+...|++|+++.++..+.  ....++.+   ..+ ..+.. +.  .+ .+.+.++.  
T Consensus       166 ~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~l---Ga~-~vi~~~~~~~~~~~~~i~~~t~~  241 (364)
T 1gu7_A          166 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKEL---GAT-QVITEDQNNSREFGPTIKEWIKQ  241 (364)
T ss_dssp             TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHH---TCS-EEEEHHHHHCGGGHHHHHHHHHH
T ss_pred             CCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHHhc---CCe-EEEecCccchHHHHHHHHHHhhc
Confidence            46 8999999999999999998888899999998766431  11222322   111 11211 10  11 23455443  


Q ss_pred             --CCCCEEEEcccc
Q 025755           76 --AGCTGVFHVACP   87 (248)
Q Consensus        76 --~~id~vi~~ag~   87 (248)
                        .++|+||.++|.
T Consensus       242 ~~~g~Dvvid~~G~  255 (364)
T 1gu7_A          242 SGGEAKLALNCVGG  255 (364)
T ss_dssp             HTCCEEEEEESSCH
T ss_pred             cCCCceEEEECCCc
Confidence              368999999873

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=96.75  E-value=0.0037  Score=52.47  Aligned_cols=74  Identities=15%  Similarity=0.108  Sum_probs=50.1

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHC-CCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCH--HHHHHHhC--CCC
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLK-GYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDY--EALCAATA--GCT   79 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~--~~~~~~~~--~id   79 (248)
                      .+.+|+|+|+ |++|...++.+... |++|++++++.+  +.+..+.+   ..+ ..  .|..+.  +.+.++..  ++|
T Consensus       186 ~g~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~~~~--~~~~~~~l---Ga~-~v--i~~~~~~~~~v~~~~~g~g~D  256 (359)
T 1h2b_A          186 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEE--KLKLAERL---GAD-HV--VDARRDPVKQVMELTRGRGVN  256 (359)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHH--HHHHHHHT---TCS-EE--EETTSCHHHHHHHHTTTCCEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHH--HHHHHHHh---CCC-EE--EeccchHHHHHHHHhCCCCCc
Confidence            4789999999 89999999988888 999999998753  22222322   111 11  243333  44555443  589


Q ss_pred             EEEEcccc
Q 025755           80 GVFHVACP   87 (248)
Q Consensus        80 ~vi~~ag~   87 (248)
                      +||.++|.
T Consensus       257 vvid~~G~  264 (359)
T 1h2b_A          257 VAMDFVGS  264 (359)
T ss_dssp             EEEESSCC
T ss_pred             EEEECCCC
Confidence            99999874

>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*

Probab=96.73  E-value=0.0061  Score=52.07  Aligned_cols=71  Identities=17%  Similarity=0.081  Sum_probs=54.0

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEE
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFH   83 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~   83 (248)
                      +.+++|+|.|++ .+|+.+++.+.+.|++|++++ +........       .+....+..|..|.+.+.++.+++|+|+-
T Consensus        22 m~~~~I~ilGgG-~lg~~l~~aa~~lG~~v~~~d-~~~~p~~~~-------ad~~~~~~~~~~d~~~l~~~a~~~d~i~~   92 (403)
T 3k5i_A           22 WNSRKVGVLGGG-QLGRMLVESANRLNIQVNVLD-ADNSPAKQI-------SAHDGHVTGSFKEREAVRQLAKTCDVVTA   92 (403)
T ss_dssp             CSCCEEEEECCS-HHHHHHHHHHHHHTCEEEEEE-STTCTTGGG-------CCSSCCEESCTTCHHHHHHHHTTCSEEEE
T ss_pred             CCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEE-CCCCcHHHh-------ccccceeecCCCCHHHHHHHHHhCCEEEE
Confidence            457899999975 699999999999999999998 543222111       11123567899999999999999998763

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=96.72  E-value=0.0022  Score=53.49  Aligned_cols=74  Identities=16%  Similarity=0.211  Sum_probs=49.2

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHC--CCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCC-HHHHHHHhC--CCC
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLK--GYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLD-YEALCAATA--GCT   79 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d-~~~~~~~~~--~id   79 (248)
                      .+++|+|+|+ |++|...++.+...  |++|++++++..  ..+..+.+-   .+ ..  .|..+ .+.++++..  ++|
T Consensus       170 ~g~~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~~~--~~~~~~~lG---a~-~v--i~~~~~~~~~~~~~~g~g~D  240 (344)
T 2h6e_A          170 AEPVVIVNGI-GGLAVYTIQILKALMKNITIVGISRSKK--HRDFALELG---AD-YV--SEMKDAESLINKLTDGLGAS  240 (344)
T ss_dssp             SSCEEEEECC-SHHHHHHHHHHHHHCTTCEEEEECSCHH--HHHHHHHHT---CS-EE--ECHHHHHHHHHHHHTTCCEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHhcCCCEEEEEeCCHH--HHHHHHHhC---CC-EE--eccccchHHHHHhhcCCCcc
Confidence            5789999999 99999999998888  999999988753  222223221   11 11  23333 333444432  689


Q ss_pred             EEEEcccc
Q 025755           80 GVFHVACP   87 (248)
Q Consensus        80 ~vi~~ag~   87 (248)
                      +||.++|.
T Consensus       241 ~vid~~g~  248 (344)
T 2h6e_A          241 IAIDLVGT  248 (344)
T ss_dssp             EEEESSCC
T ss_pred             EEEECCCC
Confidence            99999873

>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A

Probab=96.72  E-value=0.0031  Score=52.89  Aligned_cols=80  Identities=15%  Similarity=0.145  Sum_probs=54.1

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCC-eEEEEEcCCCchh------------------hHHhhhhcCCCC--CeEEEE
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGY-MVHGTVRDPCDEK------------------NAHLKKLEGASE--NLQLFK   62 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~------------------~~~~~~~~~~~~--~~~~~~   62 (248)
                      +++++|+|.|+ |++|+++++.|+..|. ++++++++.-+..                  ....+.+...++  ++..+.
T Consensus       116 L~~~~VlvvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~  194 (353)
T 3h5n_A          116 LKNAKVVILGC-GGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNSEISVSEIA  194 (353)
T ss_dssp             HHTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEE
T ss_pred             HhCCeEEEECC-CHHHHHHHHHHHhCCCCeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHHCCCCeEEEee
Confidence            45789999987 7799999999999995 7888887642110                  111111222233  455666


Q ss_pred             ccCCCHHHHHHHhCCCCEEEEcc
Q 025755           63 TDLLDYEALCAATAGCTGVFHVA   85 (248)
Q Consensus        63 ~Di~d~~~~~~~~~~id~vi~~a   85 (248)
                      .++.+..++.. +++.|+||.+.
T Consensus       195 ~~i~~~~~~~~-~~~~DlVvd~~  216 (353)
T 3h5n_A          195 LNINDYTDLHK-VPEADIWVVSA  216 (353)
T ss_dssp             CCCCSGGGGGG-SCCCSEEEECC
T ss_pred             cccCchhhhhH-hccCCEEEEec
Confidence            77776654556 78999999875

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=96.72  E-value=0.0038  Score=52.00  Aligned_cols=95  Identities=15%  Similarity=0.140  Sum_probs=59.5

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCC-eEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCH---HHHHHHh-CCCC
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGY-MVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDY---EALCAAT-AGCT   79 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~---~~~~~~~-~~id   79 (248)
                      .+++|+|+|+ |++|..+++.+...|+ +|++++++..+  .+..+.+ .   . .  ..|..+.   +.+.++. .++|
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~--~~~~~~l-a---~-~--v~~~~~~~~~~~~~~~~~~g~D  233 (343)
T 2dq4_A          164 SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYR--LAFARPY-A---D-R--LVNPLEEDLLEVVRRVTGSGVE  233 (343)
T ss_dssp             TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHH--HGGGTTT-C---S-E--EECTTTSCHHHHHHHHHSSCEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHH--HHHHHHh-H---H-h--ccCcCccCHHHHHHHhcCCCCC
Confidence            5789999999 9999999999988999 99999887532  1222221 1   1 1  1344332   2233322 3689


Q ss_pred             EEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEec
Q 025755           80 GVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSS  128 (248)
Q Consensus        80 ~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS  128 (248)
                      +||+++|..                 ......++.+++  .+++|.+++
T Consensus       234 ~vid~~g~~-----------------~~~~~~~~~l~~--~G~iv~~g~  263 (343)
T 2dq4_A          234 VLLEFSGNE-----------------AAIHQGLMALIP--GGEARILGI  263 (343)
T ss_dssp             EEEECSCCH-----------------HHHHHHHHHEEE--EEEEEECCC
T ss_pred             EEEECCCCH-----------------HHHHHHHHHHhc--CCEEEEEec
Confidence            999998731                 112334444443  358998875

>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2

Probab=96.69  E-value=0.0026  Score=51.40  Aligned_cols=57  Identities=18%  Similarity=0.063  Sum_probs=47.1

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEE
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVF   82 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi   82 (248)
                      ++.+|+++|.|+++-+|+-++..|+..|++|+++.+..                            .++.+.+++.|+||
T Consensus       156 ~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t----------------------------~~L~~~~~~ADIVI  207 (288)
T 1b0a_A          156 DTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFT----------------------------KNLRHHVENADLLI  207 (288)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSC----------------------------SCHHHHHHHCSEEE
T ss_pred             CCCCCEEEEECCChHHHHHHHHHHHHCCCeEEEEeCCc----------------------------hhHHHHhccCCEEE
Confidence            37899999999999999999999999999999986432                            23556666789999


Q ss_pred             Ecccc
Q 025755           83 HVACP   87 (248)
Q Consensus        83 ~~ag~   87 (248)
                      ...|.
T Consensus       208 ~Avg~  212 (288)
T 1b0a_A          208 VAVGK  212 (288)
T ss_dssp             ECSCC
T ss_pred             ECCCC
Confidence            88874

>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*

Probab=96.68  E-value=0.0032  Score=52.36  Aligned_cols=81  Identities=15%  Similarity=0.183  Sum_probs=51.8

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCC-eEEEEEcCCCc------------------hhhHHhhhhcCCCCCeEEE--E
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGY-MVHGTVRDPCD------------------EKNAHLKKLEGASENLQLF--K   62 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~-~V~~~~r~~~~------------------~~~~~~~~~~~~~~~~~~~--~   62 (248)
                      +++++|+|.|+ ||+|+++++.|+..|. ++++++++.-+                  +.....+.+...++.+.+.  .
T Consensus        32 L~~~~VlIvGa-GGlGs~va~~La~aGVg~ItlvD~D~Ve~SNL~RQ~l~~~~diG~~Ka~aaa~~L~~inP~v~v~~~~  110 (340)
T 3rui_A           32 IKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGVK  110 (340)
T ss_dssp             HHTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCBCCTTSTTTSTTCCGGGTTSBHHHHHHHHHHHHCTTCEEEEEC
T ss_pred             HhCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEecCCEeccccccccccCChhhcChHHHHHHHHHHHHhCCCCEEEEEe
Confidence            45789999987 5699999999999995 78888775411                  0111122222224454444  3


Q ss_pred             ccC--------------CCHHHHHHHhCCCCEEEEcc
Q 025755           63 TDL--------------LDYEALCAATAGCTGVFHVA   85 (248)
Q Consensus        63 ~Di--------------~d~~~~~~~~~~id~vi~~a   85 (248)
                      .++              .+.+.+..++++.|+||++.
T Consensus       111 ~~i~~~g~~~~~~~~~~~~~~~l~~~l~~~DlVvd~t  147 (340)
T 3rui_A          111 LSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLV  147 (340)
T ss_dssp             CCCCCTTSCCSCHHHHHHHHHHHHHHHHHCSEEEECC
T ss_pred             ccccccCcccchhhhhcCCHHHHHhhhccCCEEEecC
Confidence            333              13345677788899999876

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=96.65  E-value=0.014  Score=50.70  Aligned_cols=99  Identities=20%  Similarity=0.217  Sum_probs=68.5

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHH-hCCCCEEEEc
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAA-TAGCTGVFHV   84 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~-~~~id~vi~~   84 (248)
                      -|+|+|.|| |.||..+++.| +++++|.++.++.+. .....+.    -++..++.+|-+|.+-+++. ++..|++|-.
T Consensus       235 ~~~v~I~Gg-G~ig~~lA~~L-~~~~~v~iIE~d~~r-~~~la~~----l~~~~Vi~GD~td~~~L~ee~i~~~D~~ia~  307 (461)
T 4g65_A          235 YRRIMIVGG-GNIGASLAKRL-EQTYSVKLIERNLQR-AEKLSEE----LENTIVFCGDAADQELLTEENIDQVDVFIAL  307 (461)
T ss_dssp             CCEEEEECC-SHHHHHHHHHH-TTTSEEEEEESCHHH-HHHHHHH----CTTSEEEESCTTCHHHHHHTTGGGCSEEEEC
T ss_pred             ccEEEEEcc-hHHHHHHHHHh-hhcCceEEEecCHHH-HHHHHHH----CCCceEEeccccchhhHhhcCchhhcEEEEc
Confidence            367888775 56999999986 567999999887632 2222222    35678999999999988875 4567988754


Q ss_pred             cccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEec
Q 025755           85 ACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSS  128 (248)
Q Consensus        85 ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS  128 (248)
                      .+        +     -+.|+..+.    .|++.|.+++|-.=.
T Consensus       308 T~--------~-----De~Ni~~~l----lAk~~gv~kvIa~vn  334 (461)
T 4g65_A          308 TN--------E-----DETNIMSAM----LAKRMGAKKVMVLIQ  334 (461)
T ss_dssp             CS--------C-----HHHHHHHHH----HHHHTTCSEEEEECS
T ss_pred             cc--------C-----cHHHHHHHH----HHHHcCCcccccccc
Confidence            42        1     267777443    356778887776543

>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}

Probab=96.65  E-value=0.012  Score=48.32  Aligned_cols=111  Identities=15%  Similarity=0.170  Sum_probs=71.6

Q ss_pred             EEEEEcCccHHHHHHHHHHHHCCC-eEEEEEcCCCchhhHHhhhhcC----CCCCeEEEEccCCCHHHHHHHhCCCCEEE
Q 025755            8 RVCVTGAGGYIASWLVKYLLLKGY-MVHGTVRDPCDEKNAHLKKLEG----ASENLQLFKTDLLDYEALCAATAGCTGVF   82 (248)
Q Consensus         8 ~vlVtG~~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~~Di~d~~~~~~~~~~id~vi   82 (248)
                      ||.|+|+ |.+|..++..|+..|. +|++++++..... .....+..    ......+...  .|.    ..++++|+||
T Consensus         1 KI~IiGa-G~vG~~~a~~l~~~~l~el~L~Di~~~~~~-g~~~dl~~~~~~~~~~~~i~~t--~d~----~a~~~aD~Vi   72 (308)
T 2d4a_B            1 MITILGA-GKVGMATAVMLMMRGYDDLLLIARTPGKPQ-GEALDLAHAAAELGVDIRISGS--NSY----EDMRGSDIVL   72 (308)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHHTCSCEEEECSSTTHHH-HHHHHHHHHHHHHTCCCCEEEE--SCG----GGGTTCSEEE
T ss_pred             CEEEECc-CHHHHHHHHHHHhCCCCEEEEEcCChhhHH-HHHHHHHHhhhhcCCCeEEEEC--CCH----HHhCCCCEEE
Confidence            5889998 9999999999998887 6999998864332 11111111    1112222221  222    3578999999


Q ss_pred             EccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCC-CEEEEEec
Q 025755           83 HVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKV-KRVVVVSS  128 (248)
Q Consensus        83 ~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~-~~iV~vSS  128 (248)
                      ..+|......  ..-.+++..|+.-...+++.+.+... ..+|++|-
T Consensus        73 ~~ag~~~k~G--~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tN  117 (308)
T 2d4a_B           73 VTAGIGRKPG--MTREQLLEANANTMADLAEKIKAYAKDAIVVITTN  117 (308)
T ss_dssp             ECCSCCCCSS--CCTHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred             EeCCCCCCCC--CcHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence            9998744321  12245678888888899988887643 46666654

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=96.64  E-value=0.0049  Score=51.96  Aligned_cols=74  Identities=20%  Similarity=0.184  Sum_probs=47.7

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCC-eEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-------
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGY-MVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-------   76 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-------   76 (248)
                      .+++|+|+|+ |++|...++.+...|+ +|++++++..  ..+..+.+-   .. .  ..|..+.+..+.+.+       
T Consensus       182 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~--~~~~a~~lG---a~-~--vi~~~~~~~~~~i~~~~~~~~g  252 (370)
T 4ej6_A          182 AGSTVAILGG-GVIGLLTVQLARLAGATTVILSTRQAT--KRRLAEEVG---AT-A--TVDPSAGDVVEAIAGPVGLVPG  252 (370)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHH--HHHHHHHHT---CS-E--EECTTSSCHHHHHHSTTSSSTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHH--HHHHHHHcC---CC-E--EECCCCcCHHHHHHhhhhccCC
Confidence            4789999998 9999999999988999 7888877653  222233321   11 1  134433332233222       


Q ss_pred             CCCEEEEcccc
Q 025755           77 GCTGVFHVACP   87 (248)
Q Consensus        77 ~id~vi~~ag~   87 (248)
                      ++|+||.++|.
T Consensus       253 g~Dvvid~~G~  263 (370)
T 4ej6_A          253 GVDVVIECAGV  263 (370)
T ss_dssp             CEEEEEECSCC
T ss_pred             CCCEEEECCCC
Confidence            58999999863

>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A

Probab=96.63  E-value=0.0033  Score=50.65  Aligned_cols=58  Identities=19%  Similarity=0.019  Sum_probs=48.6

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHC--CCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCE
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLK--GYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTG   80 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~   80 (248)
                      ++.+|+++|.|++.-+|+-++..|++.  |++|+++.+..                            .++.+.+++.|+
T Consensus       155 ~l~gk~vvVvG~s~iVG~p~A~lL~~~g~~atVtv~h~~t----------------------------~~L~~~~~~ADI  206 (281)
T 2c2x_A          155 SIAGAHVVVIGRGVTVGRPLGLLLTRRSENATVTLCHTGT----------------------------RDLPALTRQADI  206 (281)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHTSTTTCCEEEEECTTC----------------------------SCHHHHHTTCSE
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHhcCCCCCEEEEEECch----------------------------hHHHHHHhhCCE
Confidence            478999999999999999999999999  89999875432                            346777788999


Q ss_pred             EEEccccC
Q 025755           81 VFHVACPV   88 (248)
Q Consensus        81 vi~~ag~~   88 (248)
                      ||...|..
T Consensus       207 VI~Avg~p  214 (281)
T 2c2x_A          207 VVAAVGVA  214 (281)
T ss_dssp             EEECSCCT
T ss_pred             EEECCCCC
Confidence            99988743

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=96.62  E-value=0.0009  Score=54.39  Aligned_cols=36  Identities=19%  Similarity=0.217  Sum_probs=31.9

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCC
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPC   41 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~   41 (248)
                      +.++|.|.|+ |.+|..+++.|++.|++|++++++.+
T Consensus         3 ~~~kV~VIGa-G~mG~~iA~~la~~G~~V~l~d~~~~   38 (283)
T 4e12_A            3 GITNVTVLGT-GVLGSQIAFQTAFHGFAVTAYDINTD   38 (283)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEeCCHH
Confidence            4578999975 88999999999999999999998864

>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A

Probab=96.62  E-value=0.0077  Score=49.66  Aligned_cols=67  Identities=15%  Similarity=0.120  Sum_probs=50.2

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEE
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVF   82 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi   82 (248)
                      ++.+|++.|.|. |.||+.+++.|...|++|++++|+....            ..+....    ..+++..++++.|+|+
T Consensus       136 ~l~g~tvGIiG~-G~IG~~vA~~l~~~G~~V~~~dr~~~~~------------~~~~~~~----~~~~l~ell~~aDiV~  198 (315)
T 3pp8_A          136 TREEFSVGIMGA-GVLGAKVAESLQAWGFPLRCWSRSRKSW------------PGVESYV----GREELRAFLNQTRVLI  198 (315)
T ss_dssp             CSTTCCEEEECC-SHHHHHHHHHHHTTTCCEEEEESSCCCC------------TTCEEEE----SHHHHHHHHHTCSEEE
T ss_pred             CcCCCEEEEEee-CHHHHHHHHHHHHCCCEEEEEcCCchhh------------hhhhhhc----ccCCHHHHHhhCCEEE
Confidence            367899999976 7899999999999999999999876421            1121111    1367888888999988


Q ss_pred             Eccc
Q 025755           83 HVAC   86 (248)
Q Consensus        83 ~~ag   86 (248)
                      .+.-
T Consensus       199 l~~P  202 (315)
T 3pp8_A          199 NLLP  202 (315)
T ss_dssp             ECCC
T ss_pred             EecC
Confidence            7763

>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}

Probab=96.62  E-value=0.0016  Score=53.37  Aligned_cols=35  Identities=26%  Similarity=0.232  Sum_probs=30.9

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCC
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPC   41 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~   41 (248)
                      +++|.|.|+ |.+|..++..|++.|++|++++|+.+
T Consensus         3 ~m~i~iiG~-G~~G~~~a~~l~~~g~~V~~~~r~~~   37 (316)
T 2ew2_A            3 AMKIAIAGA-GAMGSRLGIMLHQGGNDVTLIDQWPA   37 (316)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred             CCeEEEECc-CHHHHHHHHHHHhCCCcEEEEECCHH
Confidence            468999986 89999999999999999999998763

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=96.61  E-value=0.0025  Score=54.02  Aligned_cols=75  Identities=19%  Similarity=0.163  Sum_probs=50.3

Q ss_pred             CCcEEEEEc-CccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCC---HHHHHHHhC--CC
Q 025755            5 DKERVCVTG-AGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLD---YEALCAATA--GC   78 (248)
Q Consensus         5 ~~k~vlVtG-~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d---~~~~~~~~~--~i   78 (248)
                      .+.+|+|.| |+|++|...++.+...|++|++++++.+  +.+..+.+.   .+. .  .|..+   .+.+.++..  ++
T Consensus       170 ~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~--~~~~~~~lG---a~~-~--~~~~~~~~~~~v~~~t~~~g~  241 (379)
T 3iup_A          170 EGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQE--QADLLKAQG---AVH-V--CNAASPTFMQDLTEALVSTGA  241 (379)
T ss_dssp             TTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHH--HHHHHHHTT---CSC-E--EETTSTTHHHHHHHHHHHHCC
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHH--HHHHHHhCC---CcE-E--EeCCChHHHHHHHHHhcCCCc
Confidence            467899997 9999999999998889999999988753  223333321   111 1  22222   234444432  69


Q ss_pred             CEEEEcccc
Q 025755           79 TGVFHVACP   87 (248)
Q Consensus        79 d~vi~~ag~   87 (248)
                      |+||.++|.
T Consensus       242 d~v~d~~g~  250 (379)
T 3iup_A          242 TIAFDATGG  250 (379)
T ss_dssp             CEEEESCEE
T ss_pred             eEEEECCCc
Confidence            999999985

>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}

Probab=96.59  E-value=0.0096  Score=51.62  Aligned_cols=79  Identities=14%  Similarity=0.045  Sum_probs=52.6

Q ss_pred             CCCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCC-CCE
Q 025755            2 SGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAG-CTG   80 (248)
Q Consensus         2 ~~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~-id~   80 (248)
                      +++++|+|+|.|. |+.|.++++.|.++|++|++.+++... .....+.+..  ..+.+..+.-.+     ..+.+ +|.
T Consensus         5 ~~~~~k~v~viG~-G~sG~s~A~~l~~~G~~V~~~D~~~~~-~~~~~~~L~~--~gi~~~~g~~~~-----~~~~~~~d~   75 (451)
T 3lk7_A            5 TTFENKKVLVLGL-ARSGEAAARLLAKLGAIVTVNDGKPFD-ENPTAQSLLE--EGIKVVCGSHPL-----ELLDEDFCY   75 (451)
T ss_dssp             CTTTTCEEEEECC-TTTHHHHHHHHHHTTCEEEEEESSCGG-GCHHHHHHHH--TTCEEEESCCCG-----GGGGSCEEE
T ss_pred             hhcCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEeCCccc-CChHHHHHHh--CCCEEEECCChH-----HhhcCCCCE
Confidence            3467899999999 779999999999999999999986521 1111222222  245555443321     22345 899


Q ss_pred             EEEccccCC
Q 025755           81 VFHVACPVP   89 (248)
Q Consensus        81 vi~~ag~~~   89 (248)
                      ||...|+.+
T Consensus        76 vv~spgi~~   84 (451)
T 3lk7_A           76 MIKNPGIPY   84 (451)
T ss_dssp             EEECTTSCT
T ss_pred             EEECCcCCC
Confidence            998888744

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=96.57  E-value=0.0053  Score=52.41  Aligned_cols=74  Identities=20%  Similarity=0.162  Sum_probs=49.3

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCC-eEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCC---HHHHHHHhC--CC
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGY-MVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLD---YEALCAATA--GC   78 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d---~~~~~~~~~--~i   78 (248)
                      .+.+|+|+|+ |++|...++.+...|+ +|++++++..  ..+..+.+.   .+ ..  .|..+   .+.+.++..  ++
T Consensus       213 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~--~~~~~~~lG---a~-~v--i~~~~~~~~~~i~~~t~g~g~  283 (404)
T 3ip1_A          213 PGDNVVILGG-GPIGLAAVAILKHAGASKVILSEPSEV--RRNLAKELG---AD-HV--IDPTKENFVEAVLDYTNGLGA  283 (404)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHH--HHHHHHHHT---CS-EE--ECTTTSCHHHHHHHHTTTCCC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHH--HHHHHHHcC---CC-EE--EcCCCCCHHHHHHHHhCCCCC
Confidence            4789999998 9999999999988999 8888887653  223333331   11 12  23332   234444443  59


Q ss_pred             CEEEEcccc
Q 025755           79 TGVFHVACP   87 (248)
Q Consensus        79 d~vi~~ag~   87 (248)
                      |+||.++|.
T Consensus       284 D~vid~~g~  292 (404)
T 3ip1_A          284 KLFLEATGV  292 (404)
T ss_dssp             SEEEECSSC
T ss_pred             CEEEECCCC
Confidence            999999874

>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}

Probab=96.56  E-value=0.005  Score=47.61  Aligned_cols=36  Identities=11%  Similarity=0.042  Sum_probs=30.9

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCC
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDP   40 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~   40 (248)
                      +.+++|.|.| .|.+|..++..|.+.|++|++++|+.
T Consensus        17 ~~~~~I~iiG-~G~mG~~la~~l~~~g~~V~~~~~~~   52 (209)
T 2raf_A           17 FQGMEITIFG-KGNMGQAIGHNFEIAGHEVTYYGSKD   52 (209)
T ss_dssp             ---CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECTTC
T ss_pred             cCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence            5678999999 79999999999999999999998875

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=96.55  E-value=0.0038  Score=52.87  Aligned_cols=74  Identities=14%  Similarity=0.100  Sum_probs=49.0

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCC-CeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCC---CH---HHHHHHhC-
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKG-YMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLL---DY---EALCAATA-   76 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~---d~---~~~~~~~~-   76 (248)
                      .+++|+|+| +|++|...++.+...| ++|++++++..  ..+..+.+   ..+ ..+  |..   +.   +.+.++.. 
T Consensus       195 ~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~--~~~~~~~l---Ga~-~vi--~~~~~~~~~~~~~v~~~~~g  265 (380)
T 1vj0_A          195 AGKTVVIQG-AGPLGLFGVVIARSLGAENVIVIAGSPN--RLKLAEEI---GAD-LTL--NRRETSVEERRKAIMDITHG  265 (380)
T ss_dssp             BTCEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEESCHH--HHHHHHHT---TCS-EEE--ETTTSCHHHHHHHHHHHTTT
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHHcCCceEEEEcCCHH--HHHHHHHc---CCc-EEE--eccccCcchHHHHHHHHhCC
Confidence            478999999 8999999999988899 69999998763  22222222   111 222  333   22   23344433 


Q ss_pred             -CCCEEEEcccc
Q 025755           77 -GCTGVFHVACP   87 (248)
Q Consensus        77 -~id~vi~~ag~   87 (248)
                       ++|+||+++|.
T Consensus       266 ~g~Dvvid~~g~  277 (380)
T 1vj0_A          266 RGADFILEATGD  277 (380)
T ss_dssp             SCEEEEEECSSC
T ss_pred             CCCcEEEECCCC
Confidence             58999999974

>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1

Probab=96.55  E-value=0.0026  Score=53.09  Aligned_cols=92  Identities=18%  Similarity=0.177  Sum_probs=53.6

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCC---eEEEEE-cCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEE
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGY---MVHGTV-RDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGV   81 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~---~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~v   81 (248)
                      +++|.|.||+|.+|+.+++.|+++++   +++.+. ++.. .+..  . +.  ..++.+.  |. +.+.    ++++|+|
T Consensus         6 ~~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~s~~~~-g~~~--~-~~--g~~i~~~--~~-~~~~----~~~~DvV   72 (340)
T 2hjs_A            6 PLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESA-GQRM--G-FA--ESSLRVG--DV-DSFD----FSSVGLA   72 (340)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTT-TCEE--E-ET--TEEEECE--EG-GGCC----GGGCSEE
T ss_pred             CcEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEecCCCC-CCcc--c-cC--CcceEEe--cC-CHHH----hcCCCEE
Confidence            35899999999999999999997654   444443 2221 1100  0 10  1112222  22 1111    4679999


Q ss_pred             EEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEecc
Q 025755           82 FHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSI  129 (248)
Q Consensus        82 i~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~  129 (248)
                      |-+.+..                  .+..+++.+.+.|. ++|.+|+.
T Consensus        73 ~~a~g~~------------------~s~~~a~~~~~aG~-kvId~Sa~  101 (340)
T 2hjs_A           73 FFAAAAE------------------VSRAHAERARAAGC-SVIDLSGA  101 (340)
T ss_dssp             EECSCHH------------------HHHHHHHHHHHTTC-EEEETTCT
T ss_pred             EEcCCcH------------------HHHHHHHHHHHCCC-EEEEeCCC
Confidence            9887532                  24456777777775 56777764

>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}

Probab=96.54  E-value=0.0088  Score=50.17  Aligned_cols=33  Identities=21%  Similarity=0.272  Sum_probs=28.1

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCC-CeEEEEEcC
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKG-YMVHGTVRD   39 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g-~~V~~~~r~   39 (248)
                      ++|.|.||+|.+|+.+++.|++++ .+|+.+.++
T Consensus         9 ~kV~IiGAtG~iG~~llr~L~~~p~~ev~~i~~s   42 (354)
T 1ys4_A            9 IKVGVLGATGSVGQRFVQLLADHPMFELTALAAS   42 (354)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEEC
T ss_pred             ceEEEECcCCHHHHHHHHHHhcCCCCEEEEEEcc
Confidence            689999999999999999998765 577777654

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=96.54  E-value=0.013  Score=46.39  Aligned_cols=164  Identities=12%  Similarity=0.049  Sum_probs=85.7

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHC-CCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHh-----CCCCE
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLK-GYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAAT-----AGCTG   80 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~-----~~id~   80 (248)
                      ++|.|+|++|.+|+.+++.+.+. +++++.......+.. ....    .  ..+ +..|.++++.+...+     .++++
T Consensus         1 mkV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~-~~~~----~--~~D-vvIDfT~p~a~~~~~~~a~~~g~~~   72 (245)
T 1p9l_A            1 MRVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLS-LLTD----G--NTE-VVIDFTHPDVVMGNLEFLIDNGIHA   72 (245)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTH-HHHH----T--TCC-EEEECSCTTTHHHHHHHHHHTTCEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHH-HHhc----c--CCc-EEEEccChHHHHHHHHHHHHcCCCE
Confidence            37999999999999999999876 899886654332211 1111    1  122 346666666554433     25677


Q ss_pred             EEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCC-----CCCCCccCCCCCCchhhh
Q 025755           81 VFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPN-----WPKGQVMDEECWSDEEFC  155 (248)
Q Consensus        81 vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~-----~~~~~~~~e~~~~~~~~~  155 (248)
                      |+-..|...         +       -...+.+++++.+...+++.+..+ +.....     .. ...++.-+.....-.
T Consensus        73 VigTTG~~~---------e-------~~~~l~~aa~~~~~~~vv~a~N~s-iGv~ll~~l~~~a-a~~~~dieIiE~HH~  134 (245)
T 1p9l_A           73 VVGTTGFTA---------E-------RFQQVESWLVAKPNTSVLIAPNFA-IGAVLSMHFAKQA-ARFFDSAEVIELHHP  134 (245)
T ss_dssp             EECCCCCCH---------H-------HHHHHHHHHHTSTTCEEEECSCCC-HHHHHHHHHHHHH-GGGCSEEEEEEEECT
T ss_pred             EEcCCCCCH---------H-------HHHHHHHHHHhCCCCCEEEECCcc-HHHHHHHHHHHHH-HhhcCCEEEEECccc
Confidence            764443210         0       112344555544233666655532 221000     00 011110000001111


Q ss_pred             ccccchHHHHHHHHHHHHHHHHH-------------------hCCccEEEEccCeeecCC
Q 025755          156 KATENYYCLAKTIAEIQALEYAK-------------------RGELDIVTVCPSIVIGPM  196 (248)
Q Consensus       156 ~~~~~~Y~~sK~~~e~l~~~~~~-------------------~~~i~v~~vrpg~i~g~~  196 (248)
                      .+.+.|-|.++.++|.++.....                   ..+|.+.++|-|.+.|.+
T Consensus       135 ~K~DaPSGTA~~lae~i~~~~~~~~~~~~~~~~~~~g~r~~~~~~i~i~s~R~g~ivg~h  194 (245)
T 1p9l_A          135 HKADAPSGTAARTAKLIAEARKGLPPNPDATSTSLPGARGADVDGIPVHAVRLAGLVAHQ  194 (245)
T ss_dssp             TCCSSSCHHHHHHHHHHHHHTTTSCCCCCCCCSCCTTTTCEEETTEEEEEEECTTCCEEE
T ss_pred             CCCCCCCHHHHHHHHHHHHhhcccccccccccccccCCCCCCCCcceEEEEECCCCCeEE
Confidence            12233478899888888654320                   025889999999988863

>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}

Probab=96.52  E-value=0.003  Score=54.80  Aligned_cols=34  Identities=21%  Similarity=0.188  Sum_probs=30.6

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCC
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPC   41 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~   41 (248)
                      ++|.|.|+ |.+|..++..|++.|++|++++++..
T Consensus         3 mkI~VIG~-G~vG~~lA~~La~~G~~V~~~D~~~~   36 (450)
T 3gg2_A            3 LDIAVVGI-GYVGLVSATCFAELGANVRCIDTDRN   36 (450)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred             CEEEEECc-CHHHHHHHHHHHhcCCEEEEEECCHH
Confidence            58888875 99999999999999999999999864

>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}

Probab=96.52  E-value=0.0032  Score=49.95  Aligned_cols=35  Identities=17%  Similarity=0.282  Sum_probs=27.8

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEE-EEcCC
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHG-TVRDP   40 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~-~~r~~   40 (248)
                      +|++|.|+|+ |.+|+.+++.+.+.+.+++. ++++.
T Consensus         2 ~MmkI~ViGa-GrMG~~i~~~l~~~~~eLva~~d~~~   37 (243)
T 3qy9_A            2 ASMKILLIGY-GAMNQRVARLAEEKGHEIVGVIENTP   37 (243)
T ss_dssp             -CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEECSSC
T ss_pred             CceEEEEECc-CHHHHHHHHHHHhCCCEEEEEEecCc
Confidence            3579999999 99999999999998776665 44443

>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}

Probab=96.51  E-value=0.0018  Score=50.47  Aligned_cols=36  Identities=19%  Similarity=0.183  Sum_probs=31.9

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEE-EEcCCC
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHG-TVRDPC   41 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~-~~r~~~   41 (248)
                      ++++|.|.| +|.+|.++++.|++.|++|++ .+|+.+
T Consensus        22 ~mmkI~IIG-~G~mG~~la~~l~~~g~~V~~v~~r~~~   58 (220)
T 4huj_A           22 SMTTYAIIG-AGAIGSALAERFTAAQIPAIIANSRGPA   58 (220)
T ss_dssp             GSCCEEEEE-CHHHHHHHHHHHHHTTCCEEEECTTCGG
T ss_pred             cCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEECCCHH
Confidence            467999999 899999999999999999998 777764

>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*

Probab=96.51  E-value=0.015  Score=48.73  Aligned_cols=70  Identities=14%  Similarity=0.136  Sum_probs=50.0

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccC-CCHHHHHHHhCCCCEEEEc
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDL-LDYEALCAATAGCTGVFHV   84 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di-~d~~~~~~~~~~id~vi~~   84 (248)
                      ||+|+|+|| |..|..++..+-+.|++|++++.++......        ..+ .++..|. .|.+.+....+++|.|+-.
T Consensus         1 MK~I~ilGg-g~~g~~~~~~Ak~~G~~vv~vd~~~~~~~~~--------~aD-~~~~~~~~~d~~~~~~~~~~~D~v~~~   70 (363)
T 4ffl_A            1 MKTICLVGG-KLQGFEAAYLSKKAGMKVVLVDKNPQALIRN--------YAD-EFYCFDVIKEPEKLLELSKRVDAVLPV   70 (363)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCTTCTTTT--------TSS-EEEECCTTTCHHHHHHHHTSSSEEEEC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCChhHh--------hCC-EEEECCCCcCHHHHHHHhcCCCEEEEC
Confidence            689999985 6799999999999999999998776422111        011 2444565 4667777778899988754


Q ss_pred             c
Q 025755           85 A   85 (248)
Q Consensus        85 a   85 (248)
                      .
T Consensus        71 ~   71 (363)
T 4ffl_A           71 N   71 (363)
T ss_dssp             C
T ss_pred             C
Confidence            3

>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}

Probab=96.48  E-value=0.006  Score=48.35  Aligned_cols=37  Identities=24%  Similarity=0.207  Sum_probs=32.0

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCC
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPC   41 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~   41 (248)
                      +.+++|.|.| .|.+|.++++.|++.|++|++++|+.+
T Consensus        17 ~~~~kIgiIG-~G~mG~alA~~L~~~G~~V~~~~r~~~   53 (245)
T 3dtt_A           17 FQGMKIAVLG-TGTVGRTMAGALADLGHEVTIGTRDPK   53 (245)
T ss_dssp             --CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred             cCCCeEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCChh
Confidence            5678999995 899999999999999999999999864

>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2

Probab=96.47  E-value=0.029  Score=48.94  Aligned_cols=118  Identities=17%  Similarity=0.024  Sum_probs=70.0

Q ss_pred             CcEEEEEcCcc-HHHHHHHHHHHHC----CCeEEEEEcCCCchhh--HHhhhhc-CCCCCeEEEEccCCCHHHHHHHhCC
Q 025755            6 KERVCVTGAGG-YIASWLVKYLLLK----GYMVHGTVRDPCDEKN--AHLKKLE-GASENLQLFKTDLLDYEALCAATAG   77 (248)
Q Consensus         6 ~k~vlVtG~~g-~iG~~~~~~l~~~----g~~V~~~~r~~~~~~~--~~~~~~~-~~~~~~~~~~~Di~d~~~~~~~~~~   77 (248)
                      +++|.|.||++ |.|.+++..|+..    |.+|++++++.+....  ....... .......+...     .++..++++
T Consensus         3 ~~KIaVIGAGsVg~g~ala~~La~~~~l~~~eV~L~Di~~e~l~~~~~~~~~~l~~~~~~~~I~~t-----tD~~eal~d   77 (480)
T 1obb_A            3 SVKIGIIGAGSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEKT-----MNLDDVIID   77 (480)
T ss_dssp             CCEEEEETTTCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEE-----SCHHHHHTT
T ss_pred             CCEEEEECCCchHHHHHHHHHHHhcCcCCCCEEEEEeCCHHHHHHHHHHHHHHhccCCCCcEEEEE-----CCHHHHhCC
Confidence            56899999988 8899999888854    8899999998742211  1111111 11112222211     234456789


Q ss_pred             CCEEEEccccCC-------------CCCC---CCc--------cccchhhhHHHHHHHHHHHHhcCCC-EEEEEec
Q 025755           78 CTGVFHVACPVP-------------VGKV---PNP--------EVQLIDPAVVGTKNVLNSCVKAKVK-RVVVVSS  128 (248)
Q Consensus        78 id~vi~~ag~~~-------------~~~~---~~~--------~~~~~~~n~~g~~~~~~~~~~~~~~-~iV~vSS  128 (248)
                      +|+||..++...             .+-.   .+.        -......|+.....+++.+.+.... -||++|-
T Consensus        78 AD~VIiaagv~~~~~~~~dE~ip~K~g~~~~l~dt~g~g~~~~G~~~~~rni~i~~~i~~~i~~~~P~A~ii~~TN  153 (480)
T 1obb_A           78 ADFVINTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKLSPKAWYLQAAN  153 (480)
T ss_dssp             CSEEEECCCTTHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred             CCEEEECCCcccccccccccccccccccccchhhhcCCccchhhhHHhhhhHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence            999999997421             0000   010        1123466778888888888887543 4444443

>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*

Probab=96.47  E-value=0.02  Score=47.90  Aligned_cols=104  Identities=14%  Similarity=0.119  Sum_probs=62.7

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCC-eEEEEEcCCCc------------------hhhHHhhhhcCCCCC--eEEEE
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGY-MVHGTVRDPCD------------------EKNAHLKKLEGASEN--LQLFK   62 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~-~V~~~~r~~~~------------------~~~~~~~~~~~~~~~--~~~~~   62 (248)
                      +++.+|+|.|+ ||+|.++++.|+..|. ++++++.+.-+                  ......+.+...++.  +..+.
T Consensus        34 L~~~~VlivG~-GGlG~~ia~~La~~Gvg~itlvD~d~V~~sNL~rq~~~~~~diG~~Ka~~~~~~l~~lnp~v~v~~~~  112 (346)
T 1y8q_A           34 LRASRVLLVGL-KGLGAEIAKNLILAGVKGLTMLDHEQVTPEDPGAQFLIRTGSVGRNRAEASLERAQNLNPMVDVKVDT  112 (346)
T ss_dssp             HHTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCSSCGGGCTTSCSSCTTSBHHHHHHHHHHHTCTTSEEEEEC
T ss_pred             HhCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEECCCcchhhCCCCCccccccCcCCHHHHHHHHHHhHCCCeEEEEEe
Confidence            45689999986 6799999999999996 78888654210                  111112223333344  44444


Q ss_pred             ccCCCHHHHHHHhCCCCEEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEec
Q 025755           63 TDLLDYEALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSS  128 (248)
Q Consensus        63 ~Di~d~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS  128 (248)
                      .++.+  ....++++.|+||.+..                 |...-..+.++|.+.+ ..+|..++
T Consensus       113 ~~~~~--~~~~~~~~~dvVv~~~d-----------------~~~~r~~ln~~~~~~~-ip~i~~~~  158 (346)
T 1y8q_A          113 EDIEK--KPESFFTQFDAVCLTCC-----------------SRDVIVKVDQICHKNS-IKFFTGDV  158 (346)
T ss_dssp             SCGGG--CCHHHHTTCSEEEEESC-----------------CHHHHHHHHHHHHHTT-CEEEEEEE
T ss_pred             cccCc--chHHHhcCCCEEEEcCC-----------------CHHHHHHHHHHHHHcC-CCEEEEee
Confidence            55533  23466788999987641                 1223345667777766 35666544

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=96.43  E-value=0.0046  Score=51.09  Aligned_cols=37  Identities=19%  Similarity=0.292  Sum_probs=32.0

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCC
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPC   41 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~   41 (248)
                      .++++|.|.|. |.+|..+++.|++.|++|++++|+.+
T Consensus        29 ~~~~~I~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~   65 (320)
T 4dll_A           29 PYARKITFLGT-GSMGLPMARRLCEAGYALQVWNRTPA   65 (320)
T ss_dssp             CCCSEEEEECC-TTTHHHHHHHHHHTTCEEEEECSCHH
T ss_pred             cCCCEEEEECc-cHHHHHHHHHHHhCCCeEEEEcCCHH
Confidence            34578999965 88999999999999999999998864

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=96.43  E-value=0.011  Score=50.36  Aligned_cols=73  Identities=15%  Similarity=0.079  Sum_probs=50.0

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCC-eEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCC----HHHHHHHhC--C
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGY-MVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLD----YEALCAATA--G   77 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d----~~~~~~~~~--~   77 (248)
                      .+.+|+|+|+ |++|...++.+...|+ +|++++++..+  .+..+.+   .  ...+  |..+    .+.+.++..  +
T Consensus       185 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~--~~~a~~l---G--a~~i--~~~~~~~~~~~~~~~~~g~g  254 (398)
T 2dph_A          185 PGSHVYIAGA-GPVGRCAAAGARLLGAACVIVGDQNPER--LKLLSDA---G--FETI--DLRNSAPLRDQIDQILGKPE  254 (398)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEESCHHH--HHHHHTT---T--CEEE--ETTSSSCHHHHHHHHHSSSC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHH--HHHHHHc---C--CcEE--cCCCcchHHHHHHHHhCCCC
Confidence            4789999996 9999999998888898 89999987532  2222222   1  2333  3332    344555544  5


Q ss_pred             CCEEEEcccc
Q 025755           78 CTGVFHVACP   87 (248)
Q Consensus        78 id~vi~~ag~   87 (248)
                      +|+||.++|.
T Consensus       255 ~Dvvid~~g~  264 (398)
T 2dph_A          255 VDCGVDAVGF  264 (398)
T ss_dssp             EEEEEECSCT
T ss_pred             CCEEEECCCC
Confidence            8999999975

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	248
d2b69a1	312	c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1	2e-28
d1kewa_	361	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	2e-26
d1db3a_	357	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric	2e-24
d1e6ua_	315	c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimeras	9e-23
d1r6da_	322	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	1e-22
d1rpna_	321	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomo	6e-22
d1t2aa_	347	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H	1e-21
d1oc2a_	346	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	9e-21
d1y1pa1	342	c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo	1e-20
d2c5aa1	363	c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {T	2e-19
d1udca_	338	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	3e-19
d1orra_	338	c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella	2e-17
d1xgka_	350	c.2.1.2 (A:) Negative transcriptional regulator Nm	1e-15
d1n7ha_	339	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cr	3e-15
d1sb8a_	341	c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase W	5e-15
d1z45a2	347	c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-ep	9e-14
d1rkxa_	356	c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia	1e-13
d1ek6a_	346	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	7e-13
d1hdoa_	205	c.2.1.2 (A:) Biliverdin IX beta reductase {Human (	7e-13
d1qyda_	312	c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {	7e-13
d1qyca_	307	c.2.1.2 (A:) Phenylcoumaran benzylic ether reducta	6e-10
d1i24a_	393	c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1	7e-10
d1gy8a_	383	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	1e-07
d2q46a1	252	c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (	2e-07
d2blla1	342	c.2.1.2 (A:316-657) Polymyxin resistance protein A	4e-07
d1yb1a_	244	c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase	7e-07
d1vl0a_	281	c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD	3e-06
d1xg5a_	257	c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41	8e-05
d1eq2a_	307	c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimer	1e-04
d1sbya1	254	c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase	1e-04
d2c07a1	251	c.2.1.2 (A:54-304) beta-keto acyl carrier protein	2e-04
d1edoa_	244	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	2e-04
d1n2sa_	298	c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reduct	2e-04
d2a35a1	212	c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pse	4e-04
d2bkaa1	232	c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {H	0.002

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  107 bits (269), Expect = 2e-28
 Identities = 32/190 (16%), Positives = 74/190 (38%), Gaps = 13/190 (6%)

Query: 6   KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDL 65
           ++R+ +TG  G++ S L   L++ G+ V   V +    +  +++   G          +L
Sbjct: 1   RKRILITGGAGFVGSHLTDKLMMDGHEVTV-VDNFFTGRKRNVEHWIG------HENFEL 53

Query: 66  LDYEALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVV 125
           ++++ +         ++H+A P          ++ +    +GT N+L    +   +  ++
Sbjct: 54  INHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR--LL 111

Query: 126 VSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKRGELDIV 185
           ++S   V  +   P+     E+ W            Y   K +AE     Y K+  +++ 
Sbjct: 112 LASTSEVYGD---PEVHPQSEDYWGHVNPIGPR-ACYDEGKRVAETMCYAYMKQEGVEVR 167

Query: 186 TVCPSIVIGP 195
                   GP
Sbjct: 168 VARIFNTFGP 177

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score =  103 bits (257), Expect = 2e-26
 Identities = 32/204 (15%), Positives = 61/204 (29%), Gaps = 11/204 (5%)

Query: 8   RVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLD 67
           ++ +TG  G+I S +V++++         +       N         S        D+ D
Sbjct: 2   KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICD 61

Query: 68  YEALCAA--TAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVK-------- 117
              +           V H+A    V +        I+  +VGT  +L    K        
Sbjct: 62  SAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGED 121

Query: 118 -AKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEY 176
                R   +S+       P+  + +         E    A  + Y  +K  ++     +
Sbjct: 122 KKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRAW 181

Query: 177 AKRGELDIVTVCPSIVIGPMLQPT 200
            +   L  +    S   GP   P 
Sbjct: 182 RRTYGLPTIVTNCSNNYGPYHFPE 205

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

 Score = 98.0 bits (243), Expect = 2e-24
 Identities = 36/197 (18%), Positives = 58/197 (29%), Gaps = 19/197 (9%)

Query: 8   RVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKL----EGASENLQLFKT 63
              +TG  G   S+L ++LL KGY VHG  R         +  +       +    L   
Sbjct: 3   VALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYG 62

Query: 64  DLLDYEALCAATAGC--TGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVK 121
           DL D   L           V+++     V           D   +GT  +L +     ++
Sbjct: 63  DLSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLE 122

Query: 122 ---RVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAK 178
              R    S+     L    P+           E       + Y +AK  A    + Y +
Sbjct: 123 KKTRFYQASTSELYGLVQEIPQ----------KETTPFYPRSPYAVAKLYAYWITVNYRE 172

Query: 179 RGELDIVTVCPSIVIGP 195
              +            P
Sbjct: 173 SYGMYACNGILFNHESP 189

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} Length = 315

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

 Score = 92.6 bits (229), Expect = 9e-23
 Identities = 34/193 (17%), Positives = 62/193 (32%), Gaps = 29/193 (15%)

Query: 6   KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDL 65
           K+RV + G  G + S + + L  +G +                             + +L
Sbjct: 2   KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRT---------------------RDELNL 40

Query: 66  LDYEALCAATAG--CTGVFHVACPVPVGKVPNPEV-QLIDPAVVGTKNVLNSCVKAKVKR 122
           LD  A+    A      V+  A  V      N      I   ++   N++++  +  V +
Sbjct: 41  LDSRAVHDFFASERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNK 100

Query: 123 VVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKRGEL 182
           ++ + S          P    M E           T   Y +AK         Y ++   
Sbjct: 101 LLFLGSSCIYPKLAKQP----MAESELLQGTLEP-TNEPYAIAKIAGIKLCESYNRQYGR 155

Query: 183 DIVTVCPSIVIGP 195
           D  +V P+ + GP
Sbjct: 156 DYRSVMPTNLYGP 168

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} Length = 322

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

 Score = 92.6 bits (229), Expect = 1e-22
 Identities = 46/199 (23%), Positives = 68/199 (34%), Gaps = 17/199 (8%)

Query: 8   RVCVTGAGGYIASWLVKYLLLKGYMVHG----TVRDPCD--EKNAHLKKLEGASENLQLF 61
           R+ VTG  G+I S  V+ LL   Y         V D        A+L  ++ A   L+  
Sbjct: 2   RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVD-ADPRLRFV 60

Query: 62  KTDLLDYEALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVK 121
             D+ D   L     G   + H A    V +         +  V GT+ +L   V A V 
Sbjct: 61  HGDIRDAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVG 120

Query: 122 RVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKRGE 181
           RVV VS+        +              E       + Y  +K  +++ A  Y +   
Sbjct: 121 RVVHVSTNQVYGSIDSGS----------WTESSPLEPNSPYAASKAGSDLVARAYHRTYG 170

Query: 182 LDIVTVCPSIVIGPMLQPT 200
           LD+         GP   P 
Sbjct: 171 LDVRITRCCNNYGPYQHPE 189

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Length = 321

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 90.4 bits (223), Expect = 6e-22
 Identities = 34/201 (16%), Positives = 61/201 (30%), Gaps = 12/201 (5%)

Query: 8   RVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLD 67
              VTG  G   ++L K LL KGY VHG V     +    L++L G   ++Q    D+ D
Sbjct: 2   SALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLREL-GIEGDIQYEDGDMAD 60

Query: 68  YEALCAATAGCTGVFHVACPVPVGKVPNPEVQL--IDPAVVGTKNVLNSCVKAKVKRVVV 125
             ++  A                    +    +       +G  ++L +  +   +    
Sbjct: 61  ACSVQRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFY 120

Query: 126 VSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKRGELDIV 185
            +S   +                  DE       + Y +AK       + Y +   L   
Sbjct: 121 QASTSEMFGLIQAE---------RQDENTPFYPRSPYGVAKLYGHWITVNYRESFGLHAS 171

Query: 186 TVCPSIVIGPMLQPTINTSSL 206
           +        P+      T  +
Sbjct: 172 SGILFNHESPLRGIEFVTRKV 192

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 89.6 bits (221), Expect = 1e-21
 Identities = 39/208 (18%), Positives = 63/208 (30%), Gaps = 18/208 (8%)

Query: 6   KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKL-----EGASENLQL 60
           +    +TG  G   S+L ++LL KGY VHG VR         ++ L          N++L
Sbjct: 1   RNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKL 60

Query: 61  FKTDLLDYEALCAA--TAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKA 118
              DL D   L         T ++++     V    +      D   VGT  +L++    
Sbjct: 61  HYGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTC 120

Query: 119 KV--KRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEY 176
            +        +S   +                   E       + Y  AK  A    + +
Sbjct: 121 GLINSVKFYQASTSELYGKVQEIP---------QKETTPFYPRSPYGAAKLYAYWIVVNF 171

Query: 177 AKRGELDIVTVCPSIVIGPMLQPTINTS 204
            +   L  V         P       T 
Sbjct: 172 REAYNLFAVNGILFNHESPRRGANFVTR 199

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 87.3 bits (215), Expect = 9e-21
 Identities = 37/194 (19%), Positives = 63/194 (32%), Gaps = 3/194 (1%)

Query: 8   RVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLD 67
            + VTG  G+I S  V Y+      VH TV D                + ++L   D+ D
Sbjct: 4   NIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIAD 63

Query: 68  YEALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVS 127
            E +    A    + H A         N     I    +GT  +L +  K  ++   V +
Sbjct: 64  AELVDKLAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDIRFHHVST 123

Query: 128 SI--GAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKRGELDIV 185
               G + L  + P       E ++  E      + Y   K  +++    + +   +   
Sbjct: 124 DEVYGDLPLREDLPGHGEGPGEKFT-AETNYNPSSPYSSTKAASDLIVKAWVRSFGVKAT 182

Query: 186 TVCPSIVIGPMLQP 199
               S   GP    
Sbjct: 183 ISNCSNNYGPYQHI 196

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

 Score = 87.2 bits (214), Expect = 1e-20
 Identities = 57/214 (26%), Positives = 88/214 (41%), Gaps = 17/214 (7%)

Query: 7   ERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKN-AHLKKLEGASENLQLFKTDL 65
             V VTGA G++AS +V+ LL  GY V GT R      N       +           D+
Sbjct: 12  SLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDM 71

Query: 66  LDYEALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSC-VKAKVKRVV 124
           L   A      G  GV H+A  V      N   +++ PA+ GT N L +      VKR V
Sbjct: 72  LKQGAYDEVIKGAAGVAHIASVVS---FSNKYDEVVTPAIGGTLNALRAAAATPSVKRFV 128

Query: 125 VVSSIGAVMLNPNWPKGQVMDEECWSDEEFC----------KATENYYCLAKTIAEIQAL 174
           + SS  + ++     +G  +DE+ W+ E             + +   Y  +KT AE+ A 
Sbjct: 129 LTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAW 188

Query: 175 EY--AKRGELDIVTVCPSIVIGPMLQPTINTSSL 206
           ++    +    +  V P+  IG +  P   + S 
Sbjct: 189 KFMDENKPHFTLNAVLPNYTIGTIFDPETQSGST 222

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 363

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 83.8 bits (206), Expect = 2e-19
 Identities = 36/189 (19%), Positives = 75/189 (39%), Gaps = 11/189 (5%)

Query: 8   RVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLD 67
           ++ +TGAGG+IAS + + L  +G+ V  +      +KN H+ +        +    DL  
Sbjct: 17  KISITGAGGFIASHIARRLKHEGHYVIASDW----KKNEHMTED---MFCDEFHLVDLRV 69

Query: 68  YEALCAATAGCTGVFHVACP-VPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVV 126
            E     T G   VF++A     +G + +    ++    + + N++ +     +KR    
Sbjct: 70  MENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYA 129

Query: 127 SSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKRGELDIVT 186
           SS     + P + + +  +      + +    ++ + L K   E     Y K   ++   
Sbjct: 130 SSA---CIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDFGIECRI 186

Query: 187 VCPSIVIGP 195
                + GP
Sbjct: 187 GRFHNIYGP 195

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

 Score = 83.1 bits (204), Expect = 3e-19
 Identities = 34/212 (16%), Positives = 62/212 (29%), Gaps = 10/212 (4%)

Query: 8   RVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLD 67
           RV VTG  GYI S     LL  G+ V         +++          ++    + D+ +
Sbjct: 2   RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRN 61

Query: 68  YEALCAATA--GCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVV 125
              +           V H A    VG+     ++  D  V GT  ++++   A VK   +
Sbjct: 62  EALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKN-FI 120

Query: 126 VSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKRGELDIV 185
            SS   V  +                         Y      + +I       + +  I 
Sbjct: 121 FSSSATVYGDQPKIPYVESFPTGTPQ-------SPYGKSKLMVEQILTDLQKAQPDWSIA 173

Query: 186 TVCPSIVIGPMLQPTINTSSLLLLGFLKGFFF 217
            +     +G      +      +   L  +  
Sbjct: 174 LLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIA 205

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

 Score = 78.2 bits (191), Expect = 2e-17
 Identities = 37/198 (18%), Positives = 69/198 (34%), Gaps = 10/198 (5%)

Query: 8   RVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLD 67
           ++ +TG  G++ S L  + L +G  +             +L  L     N +    D+ +
Sbjct: 2   KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSS-LGNFEFVHGDIRN 60

Query: 68  YEALCAATAGC--TGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVV 125
              +            FH+A  V +    +      +  V GT N+L +  +      ++
Sbjct: 61  KNDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNII 120

Query: 126 VSSIGAV-------MLNPNWPKGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAK 178
            SS   V         N    +   +D+    DE       + Y  +K  A+   L+YA+
Sbjct: 121 YSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYAR 180

Query: 179 RGELDIVTVCPSIVIGPM 196
              L+ V    S + G  
Sbjct: 181 IFGLNTVVFRHSSMYGGR 198

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Length = 350

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

 Score = 73.1 bits (178), Expect = 1e-15
 Identities = 22/161 (13%), Positives = 49/161 (30%), Gaps = 15/161 (9%)

Query: 4   EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKT 63
           + K+ + V GA G   + L++     G+ V   V          L+ +        LF+ 
Sbjct: 1   QQKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNV----TLFQG 56

Query: 64  DLLDYEALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRV 123
            LL+   L         +  +                    +   K++ ++  +A   + 
Sbjct: 57  PLLNNVPLMDTLFEGAHLAFINTTSQA-----------GDEIAIGKDLADAAKRAGTIQH 105

Query: 124 VVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCL 164
            + SS+    L   WP   +   +   +    +       +
Sbjct: 106 YIYSSMPDHSLYGPWPAVPMWAPKFTVENYVRQLGLPSTFV 146

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 339

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 71.6 bits (174), Expect = 3e-15
 Identities = 35/197 (17%), Positives = 58/197 (29%), Gaps = 13/197 (6%)

Query: 6   KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENL-----QL 60
           ++   +TG  G   S+L ++LL KGY VHG +R   +     +  +     N+     +L
Sbjct: 1   RKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKL 60

Query: 61  FKTDLLDYEALCAA--TAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKA 118
              DL D  +L           V+++A    V           D    G   +L +    
Sbjct: 61  HYADLTDASSLRRWIDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSH 120

Query: 119 KVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAK 178
            +     V    A              E             + Y  +K  A    + Y +
Sbjct: 121 TIDSGRTVKYYQAGSSEMFGSTPPPQSETTPFH------PRSPYAASKCAAHWYTVNYRE 174

Query: 179 RGELDIVTVCPSIVIGP 195
              L            P
Sbjct: 175 AYGLFACNGILFNHESP 191

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} Length = 341

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 71.1 bits (173), Expect = 5e-15
 Identities = 41/211 (19%), Positives = 76/211 (36%), Gaps = 15/211 (7%)

Query: 1   MSGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVR--DPCDEKNAHLKKL--EGASE 56
           +  + K    +TG  G+I S L++ LL     V G              ++ L  E    
Sbjct: 12  LPAQPK-VWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWS 70

Query: 57  NLQLFKTDLLDYEALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCV 116
           N +  + D+ + +    A AG   V H A    V +  N  +      + G  N+L +  
Sbjct: 71  NFKFIQGDIRNLDDCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAAR 130

Query: 117 KAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEY 176
            AKV+     +S      +P  PK           E+      + Y + K + E+ A  +
Sbjct: 131 DAKVQSFTYAASSSTYGDHPGLPK----------VEDTIGKPLSPYAVTKYVNELYADVF 180

Query: 177 AKRGELDIVTVCPSIVIGPMLQPTINTSSLL 207
           ++      + +    V G    P    ++++
Sbjct: 181 SRCYGFSTIGLRYFNVFGRRQDPNGAYAAVI 211

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 67.4 bits (163), Expect = 9e-14
 Identities = 36/172 (20%), Positives = 56/172 (32%), Gaps = 8/172 (4%)

Query: 9   VCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDY 68
           V VTG  GYI S  V  L+  GY             ++  +       ++  ++ DL D 
Sbjct: 4   VLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDR 63

Query: 69  EAL--CAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVV 126
           + L           V H A    VG+     ++     ++GT  +L    +  V + V  
Sbjct: 64  KGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFS 123

Query: 127 SSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAK 178
           SS         +P    + EEC           N Y   K   E    +   
Sbjct: 124 SSATVYGDATRFPNMIPIPEECPLG------PTNPYGHTKYAIENILNDLYN 169

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Length = 356

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

 Score = 67.6 bits (163), Expect = 1e-13
 Identities = 40/221 (18%), Positives = 67/221 (30%), Gaps = 5/221 (2%)

Query: 8   RVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLD 67
           RV VTG  G+   WL  +L   G  V G            L +    ++ +Q    D+ D
Sbjct: 10  RVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTA--PTVPSLFETARVADGMQSEIGDIRD 67

Query: 68  YEALCAATAGCTG--VFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVV 125
              L  +        VFH+A    V    +  V+     V+GT  +L +       + VV
Sbjct: 68  QNKLLESIREFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVV 127

Query: 126 VSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKRGE-LDI 184
             +      N  W  G   +E     + +  +      +  +                 +
Sbjct: 128 NITSDKCYDNKEWIWGYRENEAMGGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAV 187

Query: 185 VTVCPSIVIGPMLQPTINTSSLLLLGFLKGFFFTTPSHSYM 225
            TV    VIG            +L  F +       +   +
Sbjct: 188 ATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRNPHAI 228

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.1 bits (157), Expect = 7e-13
 Identities = 39/221 (17%), Positives = 65/221 (29%), Gaps = 18/221 (8%)

Query: 6   KERVCVTGAGGYIASWLVKYLLLKGYMVHG------TVRDPCDEKNAHLKKLEGASENLQ 59
            E+V VTG  GYI S  V  LL  GY+           R       +  +  E    +++
Sbjct: 2   AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVE 61

Query: 60  LFKTDLLDYEALCAATAGCTG--VFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVK 117
             + D+LD  AL       +   V H A    VG+     +      + GT  +L     
Sbjct: 62  FEEMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKA 121

Query: 118 AKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYA 177
             VK          ++ + +             +        N Y  +K   E    +  
Sbjct: 122 HGVKN---------LVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLC 172

Query: 178 KR-GELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKGFFF 217
           +     + V +      G      I      +   L  +  
Sbjct: 173 QADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVS 213

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 205

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.5 bits (153), Expect = 7e-13
 Identities = 23/157 (14%), Positives = 49/157 (31%), Gaps = 15/157 (9%)

Query: 8   RVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLD 67
           ++ + GA G      +   +  GY V   VRD     +              +   D+L 
Sbjct: 5   KIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEG-------PRPAHVVVGDVLQ 57

Query: 68  YEALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVS 127
              +    AG   V  +            ++        G +N++ +     V +VV  +
Sbjct: 58  AADVDKTVAGQDAVIVLLGTR-------NDLSPTTVMSEGARNIVAAMKAHGVDKVVACT 110

Query: 128 SIGAVMLNPN-WPKGQVMDEECWSDEEFCKATENYYC 163
           S   +       P+ Q + ++     +  + +   Y 
Sbjct: 111 SAFLLWDPTKVPPRLQAVTDDHIRMHKVLRESGLKYV 147

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

 Score = 64.8 bits (156), Expect = 7e-13
 Identities = 22/166 (13%), Positives = 47/166 (28%), Gaps = 14/166 (8%)

Query: 4   EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEG-ASENLQLFK 62
           + K RV + G  GYI   +V   +  G+  +   R         ++ L        +L +
Sbjct: 1   DKKSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIE 60

Query: 63  TDLLDYEALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKR 122
             L D++ L  A      V                   +   ++    ++ +  +A   +
Sbjct: 61  ASLDDHQRLVDALKQVDVVISALAGGV-----------LSHHILEQLKLVEAIKEAGNIK 109

Query: 123 VVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAKTI 168
             + S  G                  + D+   +       +  T 
Sbjct: 110 RFLPSEFGMDPDIMEHALQPGSI--TFIDKRKVRRAIEAASIPYTY 153

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

 Score = 55.9 bits (133), Expect = 6e-10
 Identities = 23/160 (14%), Positives = 47/160 (29%), Gaps = 17/160 (10%)

Query: 6   KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKL--EGASENLQLFKT 63
           + R+ + GA GYI   + K  L  G+     VR+     N+   +L     +    +   
Sbjct: 3   RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHG 62

Query: 64  DLLDYEALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRV 123
            + D+ +L  A      V      + +                   N++ +  +    + 
Sbjct: 63  SIDDHASLVEAVKNVDVVISTVGSLQIES---------------QVNIIKAIKEVGTVKR 107

Query: 124 VVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYC 163
              S  G  + N +  +      E  +        E    
Sbjct: 108 FFPSEFGNDVDNVHAVEPAKSVFEVKAKVRRAIEAEGIPY 147

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 393

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 56.1 bits (133), Expect = 7e-10
 Identities = 36/215 (16%), Positives = 61/215 (28%), Gaps = 29/215 (13%)

Query: 8   RVCVTGAGGYIASWLVKYLLLKGYMVHG------------------TVRDPCDEKNAHLK 49
           RV V G  GY       +L  K Y V                    T      ++ +  K
Sbjct: 3   RVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWK 62

Query: 50  KLEGASENLQLFKTDLLDYEAL-----CAATAGCTGVFHVACPVPVGKVPNPEVQLIDPA 104
            L G  ++++L+  D+ D+E L                            +  V      
Sbjct: 63  ALTG--KSIELYVGDICDFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNN 120

Query: 105 VVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEF----CKATEN 160
           V+GT NVL +  +   +  +V          PN    +       +         K   +
Sbjct: 121 VIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASS 180

Query: 161 YYCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGP 195
           +Y L+K           K   +    +   +V G 
Sbjct: 181 FYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGV 215

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} Length = 383

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

 Score = 49.8 bits (117), Expect = 1e-07
 Identities = 33/206 (16%), Positives = 56/206 (27%), Gaps = 17/206 (8%)

Query: 8   RVCVTGAGGYIASWLVKYLLL-KGYMVHG----------------TVRDPCDEKNAHLKK 50
           RV V G  GYI S  V+ LL    + V                          + +   K
Sbjct: 4   RVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPK 63

Query: 51  LEGASENLQLFKTDLLDYEALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKN 110
              A     L   D+ + + L         +  V        V       +         
Sbjct: 64  PPWADRYAALEVGDVRNEDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVG 123

Query: 111 VLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAKTIAE 170
           +L       + +   +    +  +  N   G V       D    K+ E+ Y  +K IAE
Sbjct: 124 ILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAE 183

Query: 171 IQALEYAKRGELDIVTVCPSIVIGPM 196
               + A+   +  + +      G  
Sbjct: 184 RMIRDCAEAYGIKGICLRYFNACGAH 209

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 48.3 bits (113), Expect = 2e-07
 Identities = 29/197 (14%), Positives = 48/197 (24%), Gaps = 23/197 (11%)

Query: 5   DKERVCVTGAGGYIASWLVKYLLLKG--YMVHGTVRDPCDEKNAHLKKLEGASENLQLFK 62
           +   V VTGA G     + K L      ++  G VR          +  E       +F 
Sbjct: 2   NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSA--------QGKEKIGGEADVFI 53

Query: 63  TDLLDYEALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKR 122
            D+ D +++  A  G   +  +   VP  K          P    TK      +    + 
Sbjct: 54  GDITDADSINPAFQGIDALVILTSAVPKMK----------PGFDPTKGGRPEFIFEDGQY 103

Query: 123 VVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALE---YAKR 179
              V  IG            V                    L      +   +   Y   
Sbjct: 104 PEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNPDHPLNKLGNGNILVWKRKAEQYLAD 163

Query: 180 GELDIVTVCPSIVIGPM 196
                  +    ++   
Sbjct: 164 SGTPYTIIRAGGLLDKE 180

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

 Score = 47.6 bits (111), Expect = 4e-07
 Identities = 13/66 (19%), Positives = 26/66 (39%), Gaps = 7/66 (10%)

Query: 8  RVCVTGAGGYIASWLVKYLLLKG-YMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLL 66
          RV + G  G+I + L + LL +  Y V+G      D  +  + +      +    + D+ 
Sbjct: 2  RVLILGVNGFIGNHLTERLLREDHYEVYG-----LDIGSDAISRFLN-HPHFHFVEGDIS 55

Query: 67 DYEALC 72
           +    
Sbjct: 56 IHSEWI 61

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.5 bits (110), Expect = 7e-07
 Identities = 30/211 (14%), Positives = 50/211 (23%), Gaps = 43/211 (20%)

Query: 9   VCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDY 68
           V +TGAG  I              +     +          K +G    +  F  D  + 
Sbjct: 10  VLITGAGHGIGRLTAYEFAKLKSKLVLWDINK-HGLEETAAKCKGLGAKVHTFVVDCSNR 68

Query: 69  E---ALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDP------------AVVGTKNVLN 113
           E   +         G   +          +      DP                TK  L 
Sbjct: 69  EDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLP 128

Query: 114 SCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAKT----IA 169
           +  K     +V V+S    +  P                         YC +K       
Sbjct: 129 AMTKNNHGHIVTVASAAGHVSVPFLL---------------------AYCSSKFAAVGFH 167

Query: 170 EIQALEYAKRGELDI--VTVCPSIVIGPMLQ 198
           +    E A      +    +CP+ V    ++
Sbjct: 168 KTLTDELAALQITGVKTTCLCPNFVNTGFIK 198

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} Length = 281

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

 Score = 44.8 bits (104), Expect = 3e-06
 Identities = 11/38 (28%), Positives = 16/38 (42%)

Query: 8  RVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKN 45
          ++ +TGA G +   + K L  K   V  T     D  N
Sbjct: 3  KILITGANGQLGREIQKQLKGKNVEVIPTDVQDLDITN 40

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.3 bits (94), Expect = 8e-05
 Identities = 35/218 (16%), Positives = 70/218 (32%), Gaps = 45/218 (20%)

Query: 6   KERVC-VTGAGGYIASWLVKYLLLKGYMVHGTVRDPCD-EKNAHLKKLEGASENLQLFKT 63
           ++R+  VTGA G I + + + L+ +G  V G  R   + E+ A   K  G    L  ++ 
Sbjct: 9   RDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRC 68

Query: 64  DLLDYEALCAATA-------GCTGVFHVACPVPVGKVPNPEVQLID--------PAVVGT 108
           DL + E + +  +       G     + A       + +                  + T
Sbjct: 69  DLSNEEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICT 128

Query: 109 KNVLNSCVKAKVK--RVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAK 166
           +    S  +  V    ++ ++S+    + P                    +  ++Y   K
Sbjct: 129 REAYQSMKERNVDDGHIININSMSGHRVLPL-------------------SVTHFYSATK 169

Query: 167 ------TIAEIQALEYAKRGELDIVTVCPSIVIGPMLQ 198
                 T    Q L  A+   +    + P +V      
Sbjct: 170 YAVTALTEGLRQELREAQTH-IRATCISPGVVETQFAF 206

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

 Score = 40.0 bits (91), Expect = 1e-04
 Identities = 22/82 (26%), Positives = 29/82 (35%), Gaps = 4/82 (4%)

Query: 9  VCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCD-EKNAHLKKLEGASENLQLFKTDLLD 67
          + VTG  G+I S +VK L  KG      V +  D  K  +L  L  A     + K D L 
Sbjct: 2  IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLNIADY---MDKEDFLI 58

Query: 68 YEALCAATAGCTGVFHVACPVP 89
                       +FH      
Sbjct: 59 QIMAGEEFGDVEAIFHEGACSS 80

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

 Score = 39.6 bits (92), Expect = 1e-04
 Identities = 25/213 (11%), Positives = 50/213 (23%), Gaps = 38/213 (17%)

Query: 1   MSGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQL 60
           M   +K  V    A G I     + L+ +       +    +       K      N+  
Sbjct: 1   MDLTNK-NVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITF 59

Query: 61  FKTDLL----DYEALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCV 116
              D+     + + L            +          +   + I     G  N   + +
Sbjct: 60  HTYDVTVPVAESKKLLKKIFDQLKTVDILINGAGILDDHQIERTIAINFTGLVNTTTAIL 119

Query: 117 KAKVKR-------VVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAK--- 166
               KR       +  + S+         P                      Y  +K   
Sbjct: 120 DFWDKRKGGPGGIIANICSVTGFNAIHQVP---------------------VYSASKAAV 158

Query: 167 -TIAEIQALEYAKRGELDIVTVCPSIVIGPMLQ 198
            +     A      G +   ++ P I   P++ 
Sbjct: 159 VSFTNSLAKLAPITG-VTAYSINPGITRTPLVH 190

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 39.6 bits (92), Expect = 2e-04
 Identities = 32/216 (14%), Positives = 57/216 (26%), Gaps = 41/216 (18%)

Query: 2   SGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDP--CDEKNAHLKKLEGASENLQ 59
            GE+K    VTGAG  I   + K L      V    R    CD     +K     S    
Sbjct: 7   CGENK-VALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYA 65

Query: 60  LFKTDLLDYEALCAATAGCTGVFHVACPVPVGKVPNPEVQLID------------PAVVG 107
              +   +   +            +          N  +++ +                 
Sbjct: 66  GDVSKKEEISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYI 125

Query: 108 TKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAK- 166
           T+ +    +  +  R++ +SSI  +  N                          Y  +K 
Sbjct: 126 TQPISKRMINNRYGRIINISSIVGLTGNVGQA---------------------NYSSSKA 164

Query: 167 ---TIAEIQALEYAKRGELDIVTVCPSIVIGPMLQP 199
                 +  A E A R  + +  + P  +   M   
Sbjct: 165 GVIGFTKSLAKELASRN-ITVNAIAPGFISSDMTDK 199

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score = 39.3 bits (91), Expect = 2e-04
 Identities = 33/209 (15%), Positives = 59/209 (28%), Gaps = 41/209 (19%)

Query: 9   VCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDY 68
           V VTGA   I   +   L   G  V               K++E        F  D+   
Sbjct: 4   VVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKE 63

Query: 69  EALCAA-----------TAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVK 117
             + A                         + +    +   ++ID  + G      +  K
Sbjct: 64  ADVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATK 123

Query: 118 AKVK----RVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAK----TIA 169
             +K    R++ ++S+  ++ N                          Y  AK      +
Sbjct: 124 IMMKKRKGRIINIASVVGLIGNIGQA---------------------NYAAAKAGVIGFS 162

Query: 170 EIQALEYAKRGELDIVTVCPSIVIGPMLQ 198
           +  A E A R  +++  VCP  +   M  
Sbjct: 163 KTAAREGASRN-INVNVVCPGFIASDMTA 190

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} Length = 298

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

 Score = 39.5 bits (90), Expect = 2e-04
 Identities = 10/58 (17%), Positives = 22/58 (37%), Gaps = 2/58 (3%)

Query: 8  RVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDL 65
           + + G  G +   L + L   G ++   V     E        +G +E ++  + D+
Sbjct: 2  NILLFGKTGQVGWELQRSLAPVGNLIALDVHSK--EFCGDFSNPKGVAETVRKLRPDV 57

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 38.2 bits (87), Expect = 4e-04
 Identities = 7/40 (17%), Positives = 12/40 (30%)

Query: 8  RVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAH 47
          RV + GA G     L+  +L +  +               
Sbjct: 4  RVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAEHP 43

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} Length = 232

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.3 bits (82), Expect = 0.002
 Identities = 9/44 (20%), Positives = 15/44 (34%)

Query: 6  KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLK 49
           + V + GA G     L+K +L +G     T+            
Sbjct: 14 NKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA 57

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	248
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	100.0
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	100.0
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	100.0
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	100.0
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	100.0
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	100.0
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	100.0
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	100.0
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	100.0
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	100.0
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	100.0
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	100.0
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	100.0
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	100.0
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	100.0
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	100.0
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	100.0
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	100.0
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	100.0
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	100.0
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	100.0
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	100.0
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	100.0
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	100.0
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	100.0
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	100.0
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	100.0
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	100.0
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	100.0
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	100.0
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	100.0
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	100.0
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	100.0
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	100.0
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	100.0
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	100.0
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	100.0
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	100.0
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	100.0
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	99.98
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	99.98
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	99.98
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	99.98
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	99.98
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	99.97
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	99.97
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.97
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	99.97
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	99.97
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	99.97
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	99.97
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	99.97
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	99.97
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.97
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	99.97
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	99.97
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.97
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	99.96
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	99.96
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	99.96
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	99.96
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	99.96
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	99.96
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	99.96
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	99.95
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	99.95
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	99.95
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	99.95
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	99.95
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	99.95
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	99.95
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	99.95
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	99.95
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.95
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	99.94
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	99.94
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	99.94
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.94
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	99.94
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	99.94
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	99.93
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.93
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.93
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	99.93
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.92
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	99.92
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	99.88
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	99.85
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	99.84
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.84
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	99.84
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	99.83
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	99.8
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	99.72
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	99.64
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	98.47
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	98.42
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	98.37
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	98.27
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	98.22
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	98.2
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	98.11
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	98.1
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	98.08
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	98.08
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	98.0
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	98.0
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	97.98
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	97.95
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	97.94
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	97.93
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	97.91
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	97.88
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.87
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	97.87
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	97.86
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	97.85
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	97.83
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	97.8
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	97.77
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	97.76
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	97.75
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	97.75
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	97.73
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	97.73
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	97.68
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	97.62
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	97.6
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	97.59
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	97.54
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	97.54
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	97.49
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	97.47
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	97.45
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	97.44
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	97.42
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	97.36
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	97.35
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	97.31
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	97.26
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	97.26
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	97.23
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	97.19
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	97.16
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	97.12
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	97.04
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	96.97
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	96.96
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	96.94
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	96.94
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	96.93
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	96.89
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	96.86
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	96.86
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	96.79
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	96.79
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	96.78
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	96.75
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	96.74
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	96.74
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	96.59
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	96.56
d2csua1	129	Acetate-CoA ligase alpha chain, AcdA, N-terminal d	96.46
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	96.45
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	96.33
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	96.3
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	96.29
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	96.26
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	96.26
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	96.23
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	96.19
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	96.18
d2hjsa1	144	Usg-1 protein homolog PA3116 {Pseudomonas aerugino	96.18
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	96.15
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	96.13
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	96.11
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	96.07
d2g17a1	179	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	96.06
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	95.99
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	95.98
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	95.98
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	95.95
d1mb4a1	147	Aspartate beta-semialdehyde dehydrogenase {Vibrio	95.94
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	95.94
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	95.91
d1vkna1	176	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	95.85
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	95.8
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	95.79
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	95.75
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	95.74
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	95.67
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	95.65
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	95.64
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	95.54
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	95.52
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	95.49
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	95.36
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	95.33
d2cvoa1	183	Putative semialdehyde dehydrogenase {Rice (Oryza s	95.33
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	95.32
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	95.31
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	95.21
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	95.12
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	95.11
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	95.03
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	95.02
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	94.97
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	94.95
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	94.9
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	94.87
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	94.65
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	94.54
d1b7go1	178	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	94.47
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	94.45
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	94.42
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	94.39
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	94.34
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	94.06
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	94.05
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	94.02
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	93.89
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	93.87
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	93.85
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	93.75
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	93.72
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	93.7
d1s6ya1	169	6-phospho-beta-glucosidase {Bacillus stearothermop	93.7
d1obba1	171	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	93.28
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	93.19
d1y81a1	116	Hypothetical protein PF0725 {Pyrococcus furiosus [	93.17
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	93.16
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	93.1
d2gz1a1	154	Aspartate beta-semialdehyde dehydrogenase {Strepto	92.82
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	92.79
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	92.79
d1yova1	529	Amyloid beta precursor protein-binding protein 1,	92.74
d1p9oa_	290	Phosphopantothenoylcysteine synthetase {Human (Hom	92.66
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	92.63
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	92.56
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	92.51
d1cf2o1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	92.46
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	92.38
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	92.24
d1m6ya2	192	TM0872, methyltransferase domain {Thermotoga marit	92.21
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	91.84
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	91.53
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	91.5
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	91.48
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	91.41
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	91.4
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	91.21
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	91.2
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	91.12
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	91.08
d2czca2	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	90.91
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	90.82
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	90.8
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	90.78
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	90.75
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	90.45
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	90.24
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	90.02
d1byia_	224	Dethiobiotin synthetase {Escherichia coli [TaxId:	89.95
d1f06a1	170	Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb	89.8
d1cp2a_	269	Nitrogenase iron protein {Clostridium pasteurianum	89.66
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	89.64
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	89.48
d1oria_	316	Protein arginine N-methyltransferase 1, PRMT1 {Rat	89.33
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	89.3
d1hyqa_	232	Cell division regulator MinD {Archaeon Archaeoglob	89.27
d1gtma1	239	Glutamate dehydrogenase {Archaeon Pyrococcus furio	89.25
d2as0a2	324	Hypothetical protein PH1915, middle and C-terminal	89.22
d2blna2	203	Polymyxin resistance protein ArnA, N-terminal doma	89.1
d1ihua2	279	Arsenite-translocating ATPase ArsA {Escherichia co	89.02
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	88.95
d1g3qa_	237	Cell division regulator MinD {Archaeon Pyrococcus	88.81
d1m6ia2	137	Apoptosis-inducing factor (AIF) {Human (Homo sapie	88.7
d1i8ta1	298	UDP-galactopyranose mutase, N-terminal domain {Esc	88.53
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	88.45
d1a9xa4	121	Carbamoyl phosphate synthetase (CPS), large subuni	88.38
d1d7ya1	183	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	87.75
d1p3y1_	183	MrsD {Bacillus sp. hil-y85/54728 [TaxId: 69002]}	87.3
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	87.22
d1feca2	117	Trypanothione reductase {Crithidia fasciculata [Ta	87.17
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	87.16
d1jyea_	271	Lac-repressor (lacR) core (C-terminal domain) {Esc	86.74
d1ne2a_	197	Hypothetical protein Ta1320 {Archaeon Thermoplasma	86.24
d1nhpa1	198	NADH peroxidase {Enterococcus faecalis [TaxId: 135	86.05
d1gsoa2	105	Glycinamide ribonucleotide synthetase (GAR-syn), N	85.89
d2bisa1	437	Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI	85.74
d1fl2a2	126	Alkyl hydroperoxide reductase subunit F (AhpF), C-	85.74
d1up7a1	162	6-phospho-beta-glucosidase {Thermotoga maritima [T	85.73
d2gv8a1	335	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	85.72
d1xk7a1	402	Crotonobetainyl-CoA:carnitine CoA-transferase, Cai	85.68
d1wy7a1	201	Hypothetical protein PH1948 {Archaeon Pyrococcus h	85.61
d1nt2a_	209	Fibrillarin homologue {Archaeon Archaeoglobus fulg	85.58
d1gesa1	217	Glutathione reductase {Escherichia coli [TaxId: 56	84.98
d1f0ka_	351	Peptidoglycan biosynthesis glycosyltransferase Mur	84.86
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	84.38
d2csua3	163	Acetate-CoA ligase alpha chain, AcdA, domains 2 an	84.1
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	83.61
d1q7ea_	417	Hypothetical protein YfdW {Escherichia coli [TaxId	83.44
d2gv8a2	107	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	83.42
d1g8sa_	230	Fibrillarin homologue {Archaeon Methanococcus jann	83.38
d1pvva2	163	Ornithine transcarbamoylase {Archaeon Pyrococcus f	83.1
d1g6q1_	328	Arginine methyltransferase, HMT1 {Baker's yeast (S	83.1
d1xhca1	167	NADH oxidase /nitrite reductase {Pyrococcus furios	82.72
d1vdca2	130	Thioredoxin reductase {Mouse-ear cress (Arabidopsi	82.6
d2nxca1	254	PrmA-like protein TTHA0656 (TT0836) {Thermus therm	82.56
d1kifa1	246	D-aminoacid oxidase, N-terminal domain {Pig (Sus s	82.54
d1uwva2	358	rRNA (Uracil-5-)-methyltransferase RumA, catalytic	82.43
d2afhe1	289	Nitrogenase iron protein {Azotobacter vinelandii [	82.41
d1nvmb1	157	Acetaldehyde dehydrogenase (acylating) {Pseudomona	81.73
d2bw0a2	203	10-formyltetrahydrofolate dehydrogenase domain 1 {	81.52
d1ve3a1	226	Hypothetical protein PH0226 {Archaeon Pyrococcus h	81.44
d1ps9a2	162	2,4-dienoyl-CoA reductase, C-terminal domain {Esch	81.21
d1rp0a1	278	Thiazole biosynthetic enzyme Thi4 {Thale cress(Ara	80.81
d2b3ta1	274	N5-glutamine methyltransferase, HemK {Escherichia	80.72
d2vjma1	427	Formyl-CoA transferase {Oxalobacter formigenes [Ta	80.37

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=2e-37  Score=249.57  Aligned_cols=209  Identities=15%  Similarity=0.165  Sum_probs=162.5

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC------
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA------   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~------   76 (248)
                      +|++|++|||||++|||+++++.|+++|++|++++|+.+ ..+...+++.....++.++.+|++|+++++++++      
T Consensus         7 ~lenKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~-~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~   85 (251)
T d2c07a1           7 CGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQK-SCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEH   85 (251)
T ss_dssp             CCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHH-HHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHH-HHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhc
Confidence            588999999999999999999999999999999999864 3344455565666789999999999999988875      


Q ss_pred             -CCCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHH----hcCCCEEEEEeccceeccCCCCCCCCccCCC
Q 025755           77 -GCTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCV----KAKVKRVVVVSSIGAVMLNPNWPKGQVMDEE  147 (248)
Q Consensus        77 -~id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~----~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~  147 (248)
                       ++|++|||||.......    .++|...+++|+.++.++.+++.    +.+.++||++||..+..+.+....       
T Consensus        86 g~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~~~~-------  158 (251)
T d2c07a1          86 KNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQAN-------  158 (251)
T ss_dssp             SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHH-------
T ss_pred             CCceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHhcCCCCCCHH-------
Confidence             58999999997665432    24567889999999877777654    447789999999988877665333       


Q ss_pred             CCCchhhhccccchHHHHHH----HHHHHHHHHHHhCCccEEEEccCeeecCCCCCCCCccHHHHHHHHcC----C----
Q 025755          148 CWSDEEFCKATENYYCLAKT----IAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKG----F----  215 (248)
Q Consensus       148 ~~~~~~~~~~~~~~Y~~sK~----~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~~----~----  215 (248)
                                    |+.||+    +++.++.++++++ ||||+|+||.+.+|+.....   ....+.+...    +    
T Consensus       159 --------------Y~asKaal~~ltr~lA~el~~~g-IrVN~V~PG~v~T~~~~~~~---~~~~~~~~~~~pl~R~~~p  220 (251)
T d2c07a1         159 --------------YSSSKAGVIGFTKSLAKELASRN-ITVNAIAPGFISSDMTDKIS---EQIKKNIISNIPAGRMGTP  220 (251)
T ss_dssp             --------------HHHHHHHHHHHHHHHHHHHGGGT-EEEEEEEECSBCC-----CC---HHHHHHHHTTCTTSSCBCH
T ss_pred             --------------HHHHHHHHHHHHHHHHHHhhhhC-eEEEEEccCCEecccccccC---HHHHHHHHhcCCCCCCcCH
Confidence                          999995    7777777777654 99999999999999865432   2222332221    1    


Q ss_pred             --------CCCCCCCchhhhhhhhhcccee
Q 025755          216 --------FFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       216 --------~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                              ||.++.+.|+||++|.||||++
T Consensus       221 edvA~~v~fL~S~~s~~itG~~i~vDGG~s  250 (251)
T d2c07a1         221 EEVANLACFLSSDKSGYINGRVFVIDGGLS  250 (251)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEESTTSC
T ss_pred             HHHHHHHHHHhCchhCCCcCcEEEECCCcC
Confidence                    8889999999999999999975

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=100.00  E-value=5.5e-37  Score=246.39  Aligned_cols=208  Identities=16%  Similarity=0.174  Sum_probs=156.3

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC------
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA------   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~------   76 (248)
                      .|++|+++||||++|||+++++.|+++|++|++++|+..+......   .....++.++++|++|+++++++++      
T Consensus         2 rL~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~---~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~   78 (247)
T d2ew8a1           2 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAI---RNLGRRVLTVKCDVSQPGDVEAFGKQVISTF   78 (247)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHH---HHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHH---HHcCCcEEEEEeeCCCHHHHHHHHHHHHHHc
Confidence            5899999999999999999999999999999999998754333322   2335689999999999999888865      


Q ss_pred             -CCCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHH----hcCCCEEEEEeccceeccCCCCCCCCccCCC
Q 025755           77 -GCTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCV----KAKVKRVVVVSSIGAVMLNPNWPKGQVMDEE  147 (248)
Q Consensus        77 -~id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~----~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~  147 (248)
                       ++|++|||||.......    .+.|+..+++|+.++.++.+++.    +.+.++||++||..+..+.+....       
T Consensus        79 G~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~-------  151 (247)
T d2ew8a1          79 GRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTH-------  151 (247)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCSSCHH-------
T ss_pred             CCCCEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchhcccCccccc-------
Confidence             68999999998765432    35567899999999887777664    446789999999887776654333       


Q ss_pred             CCCchhhhccccchHHHHHH----HHHHHHHHHHHhCCccEEEEccCeeecCCCCCCCC-c----------------cHH
Q 025755          148 CWSDEEFCKATENYYCLAKT----IAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTIN-T----------------SSL  206 (248)
Q Consensus       148 ~~~~~~~~~~~~~~Y~~sK~----~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~-~----------------~~~  206 (248)
                                    |+.||+    +++.++.++++++ ||||+|+||.+.+|+...... .                .+.
T Consensus       152 --------------Y~asKaal~~ltk~lA~ela~~g-IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~l~r~~~pe  216 (247)
T d2ew8a1         152 --------------YISTKAANIGFTRALASDLGKDG-ITVNAIAPSLVRTATTEASALSAMFDVLPNMLQAIPRLQVPL  216 (247)
T ss_dssp             --------------HHHHHHHHHHHHHHHHHHHGGGT-EEEEEEEECCC------------------CTTSSSCSCCCTH
T ss_pred             --------------chhhhccHHHHHHHHHHHhcccC-eEEEEEeeCCCCCccccccccchhHHHHHHHhccCCCCCCHH
Confidence                          999995    7777788887765 999999999999987543210 0                011


Q ss_pred             HHHHHHcCCCCCCCCCchhhhhhhhhcccee
Q 025755          207 LLLGFLKGFFFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       207 ~~~~~~~~~~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                      -+..+..  ||.++.+.|+||++|.||||+.
T Consensus       217 dvA~~v~--fL~S~~s~~itG~~i~vDGG~~  245 (247)
T d2ew8a1         217 DLTGAAA--FLASDDASFITGQTLAVDGGMV  245 (247)
T ss_dssp             HHHHHHH--HHTSGGGTTCCSCEEEESSSCC
T ss_pred             HHHHHHH--HHhCchhcCCcCCeEEECCCEe
Confidence            1111111  8889999999999999999974

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=4.9e-37  Score=248.27  Aligned_cols=218  Identities=16%  Similarity=0.159  Sum_probs=150.2

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC------
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA------   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~------   76 (248)
                      +|++|+++||||++|||+++++.|+++|++|++++|+.++ .++..+++.....++..+.+|++|+++++++++      
T Consensus         5 ~LkgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~-l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   83 (259)
T d1xq1a_           5 SLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYE-LNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMF   83 (259)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHH-HHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHH-HHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHHh
Confidence            4789999999999999999999999999999999998643 334444555556789999999999998877663      


Q ss_pred             --CCCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHHh----cCCCEEEEEeccceeccCCCCCCCCccCC
Q 025755           77 --GCTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCVK----AKVKRVVVVSSIGAVMLNPNWPKGQVMDE  146 (248)
Q Consensus        77 --~id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~~----~~~~~iV~vSS~~~~~~~~~~~~~~~~~e  146 (248)
                        .+|++|||||.......    .++|+..+++|+.++..+.+++.+    .+.++||++||..+..+.+....      
T Consensus        84 ~g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~------  157 (259)
T d1xq1a_          84 GGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSI------  157 (259)
T ss_dssp             TTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC----------CCH------
T ss_pred             CCCcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhccccccccccccccccccccccccccc------
Confidence              48999999998664422    245678899999998877777644    47789999999887776654333      


Q ss_pred             CCCCchhhhccccchHHHHHH----HHHHHHHHHHHhCCccEEEEccCeeecCCCCCCC--CccHHHHHHHHcCC-----
Q 025755          147 ECWSDEEFCKATENYYCLAKT----IAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTI--NTSSLLLLGFLKGF-----  215 (248)
Q Consensus       147 ~~~~~~~~~~~~~~~Y~~sK~----~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~--~~~~~~~~~~~~~~-----  215 (248)
                                     |+.||+    +++.++.++++++ ||||+|+||.+.+|+.....  ........+..-++     
T Consensus       158 ---------------Y~asKaal~~lt~~lA~e~~~~g-IrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~pl~R~~~pe  221 (259)
T d1xq1a_         158 ---------------YSATKGALNQLARNLACEWASDG-IRANAVAPAVIATPLAEAVYDDEFKKVVISRKPLGRFGEPE  221 (259)
T ss_dssp             ---------------HHHHHHHHHHHHHHHHHHHGGGT-CEEEEEECCSCC-------------------------CCGG
T ss_pred             ---------------ccccccchhhhhHHHHHHhcccC-eEEEEeccCcccCHHhhhhchHHHHHHHHhCCCCCCCcCHH
Confidence                           999995    7777777777765 99999999999999765321  11111111111121     


Q ss_pred             -------CCCCCCCchhhhhhhhhccceeEEEeec
Q 025755          216 -------FFTTPSHSYMLERTLVLNQGVRLYRCKI  243 (248)
Q Consensus       216 -------~l~~~~~~~~~g~~l~vd~g~~~~~~~~  243 (248)
                             ||.++.+.|+||+.|.||||+++.....
T Consensus       222 dvA~~v~fL~S~~s~~iTG~~i~vDGG~s~~g~~~  256 (259)
T d1xq1a_         222 EVSSLVAFLCMPAASYITGQTICVDGGLTVNGFSY  256 (259)
T ss_dssp             GGHHHHHHHTSGGGTTCCSCEEECCCCEEETTEEE
T ss_pred             HHHHHHHHHhCchhcCCcCcEEEeCCCEECCCCCC
Confidence                   8899999999999999999998765443

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=2.3e-37  Score=249.68  Aligned_cols=210  Identities=14%  Similarity=0.137  Sum_probs=163.7

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC------
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA------   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~------   76 (248)
                      .|+||+++||||++|||+++++.|+++|++|++++|+.+ ..++..+++.....++.++++|++|+++++++++      
T Consensus         8 ~L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~-~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~~   86 (255)
T d1fmca_           8 RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINAD-AANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKL   86 (255)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHH-HHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHH-HHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            378999999999999999999999999999999999864 3344455555556789999999999999888765      


Q ss_pred             -CCCEEEEccccCCCCCC---CCccccchhhhHHHHHHHHHHHHh----cCCCEEEEEeccceeccCCCCCCCCccCCCC
Q 025755           77 -GCTGVFHVACPVPVGKV---PNPEVQLIDPAVVGTKNVLNSCVK----AKVKRVVVVSSIGAVMLNPNWPKGQVMDEEC  148 (248)
Q Consensus        77 -~id~vi~~ag~~~~~~~---~~~~~~~~~~n~~g~~~~~~~~~~----~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~  148 (248)
                       ++|++|||||.......   .++|+..+++|+.++.++.+++.+    .+.++||++||..+..+.+....        
T Consensus        87 g~iDilvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~~~~~~~~~~--------  158 (255)
T d1fmca_          87 GKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTS--------  158 (255)
T ss_dssp             SSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHH--------
T ss_pred             CCCCEeeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccccchhcccccccc--------
Confidence             58999999997654322   345677899999998877776644    46789999999887776655333        


Q ss_pred             CCchhhhccccchHHHHHH----HHHHHHHHHHHhCCccEEEEccCeeecCCCCCCCCccHHHHHHHHc----CC-----
Q 025755          149 WSDEEFCKATENYYCLAKT----IAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLK----GF-----  215 (248)
Q Consensus       149 ~~~~~~~~~~~~~Y~~sK~----~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~----~~-----  215 (248)
                                   |+.||+    +++.++.+++++ |||||+|+||.+.+|+.....  .+...+.+.+    ++     
T Consensus       159 -------------Y~asKaal~~lt~~lA~el~~~-gIrVN~I~PG~i~T~~~~~~~--~~e~~~~~~~~~pl~R~g~pe  222 (255)
T d1fmca_         159 -------------YASSKAAASHLVRNMAFDLGEK-NIRVNGIAPGAILTDALKSVI--TPEIEQKMLQHTPIRRLGQPQ  222 (255)
T ss_dssp             -------------HHHHHHHHHHHHHHHHHHHHTT-TEEEEEEEECSBCSHHHHTTC--CHHHHHHHHHTCSSCSCBCHH
T ss_pred             -------------chhHHHHHHHHHHHHHHHhCcc-CeEEEEeeeCcCcChHhhccC--CHHHHHHHHhcCCCCCCcCHH
Confidence                         999995    777777777765 599999999999998654321  1222222222    22     


Q ss_pred             -------CCCCCCCchhhhhhhhhcccee
Q 025755          216 -------FFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       216 -------~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                             ||.++.+.|+||++|.||||+.
T Consensus       223 dvA~~v~fL~S~~s~~itG~~i~vDGG~~  251 (255)
T d1fmca_         223 DIANAALFLCSPAASWVSGQILTVSGGGV  251 (255)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESTTSC
T ss_pred             HHHHHHHHHhCchhcCCcCCEEEECcCcc
Confidence                   8889999999999999999973

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=2.2e-37  Score=249.17  Aligned_cols=212  Identities=17%  Similarity=0.184  Sum_probs=160.3

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhh-cCCCCCeEEEEccCCCHHHHHHHhC-----
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKL-EGASENLQLFKTDLLDYEALCAATA-----   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~Di~d~~~~~~~~~-----   76 (248)
                      +|++|+++||||++|||++++++|+++|++|++++|+.++.. +..+++ .....++.++++|++|+++++++++     
T Consensus         2 ~l~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~-~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~   80 (251)
T d1vl8a_           2 DLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEAS-EAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEK   80 (251)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            589999999999999999999999999999999999875332 223333 2235678899999999999888875     


Q ss_pred             --CCCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHHh----cCCCEEEEEeccceec-cCCCCCCCCccC
Q 025755           77 --GCTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCVK----AKVKRVVVVSSIGAVM-LNPNWPKGQVMD  145 (248)
Q Consensus        77 --~id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~~----~~~~~iV~vSS~~~~~-~~~~~~~~~~~~  145 (248)
                        ++|++|||||.......    .++|+..+++|+.++.++.+++.+    .+.++||++||..+.. +.++.       
T Consensus        81 ~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~~~~~~~~-------  153 (251)
T d1vl8a_          81 FGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNI-------  153 (251)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCSSSC-------
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchhccccCccc-------
Confidence              58999999998654422    345678899999998888777654    4668999999965433 33332       


Q ss_pred             CCCCCchhhhccccchHHHHHH----HHHHHHHHHHHhCCccEEEEccCeeecCCCCCCCCccHHHHHHHH----cCC--
Q 025755          146 EECWSDEEFCKATENYYCLAKT----IAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTINTSSLLLLGFL----KGF--  215 (248)
Q Consensus       146 e~~~~~~~~~~~~~~~Y~~sK~----~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~----~~~--  215 (248)
                                    .+|+.||+    +++.++.++++++ ||||+|+||.+.+|+...... .+...+.+.    -++  
T Consensus       154 --------------~~Y~asKaal~~lt~~lA~e~~~~g-IrVN~I~PG~i~T~~~~~~~~-~~~~~~~~~~~~pl~R~~  217 (251)
T d1vl8a_         154 --------------SAYAASKGGVASLTKALAKEWGRYG-IRVNVIAPGWYRTKMTEAVFS-DPEKLDYMLKRIPLGRTG  217 (251)
T ss_dssp             --------------HHHHHHHHHHHHHHHHHHHHHGGGT-CEEEEEEECCBCSTTTHHHHT-CHHHHHHHHHTCTTSSCB
T ss_pred             --------------cchHHHHHhHHHHHHHHHHHhcccC-eEEEEEeeCcccCHHHHhccC-CHHHHHHHHhcCCCCCCC
Confidence                          23999995    7777777777654 999999999999998643211 112222222    222  


Q ss_pred             ----------CCCCCCCchhhhhhhhhccceeE
Q 025755          216 ----------FFTTPSHSYMLERTLVLNQGVRL  238 (248)
Q Consensus       216 ----------~l~~~~~~~~~g~~l~vd~g~~~  238 (248)
                                ||.++.+.|+||++|.||||+++
T Consensus       218 ~pedvA~~v~fL~S~~a~~itG~~i~vDGG~ta  250 (251)
T d1vl8a_         218 VPEDLKGVAVFLASEEAKYVTGQIIFVDGGWTA  250 (251)
T ss_dssp             CGGGGHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             CHHHHHHHHHHHhCchhCCCcCcEEEeCcCeeC
Confidence                      78899999999999999999864

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=100.00  E-value=2.2e-37  Score=250.52  Aligned_cols=214  Identities=18%  Similarity=0.207  Sum_probs=165.5

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC------
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA------   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~------   76 (248)
                      +|++|+++||||++|||++++++|+++|++|++++|+.++..+...+.+.....++.++++|++|+++++++++      
T Consensus         4 dL~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~   83 (261)
T d1geea_           4 DLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEF   83 (261)
T ss_dssp             GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            48999999999999999999999999999999999987544455555555556788999999999999888875      


Q ss_pred             -CCCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHHh----cC-CCEEEEEeccceeccCCCCCCCCccCC
Q 025755           77 -GCTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCVK----AK-VKRVVVVSSIGAVMLNPNWPKGQVMDE  146 (248)
Q Consensus        77 -~id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~~----~~-~~~iV~vSS~~~~~~~~~~~~~~~~~e  146 (248)
                       ++|++|||||.......    .++|+..+++|+.++.++.+++.+    .+ .++||++||..+..+.+....      
T Consensus        84 G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~~~~~~~~------  157 (261)
T d1geea_          84 GKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVH------  157 (261)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHH------
T ss_pred             CCCCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhcccCccccc------
Confidence             58999999998765422    345678899999998777766643    44 356999999887766654333      


Q ss_pred             CCCCchhhhccccchHHHHHH----HHHHHHHHHHHhCCccEEEEccCeeecCCCCCCCCccHHHHHHHHc----CC---
Q 025755          147 ECWSDEEFCKATENYYCLAKT----IAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLK----GF---  215 (248)
Q Consensus       147 ~~~~~~~~~~~~~~~Y~~sK~----~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~----~~---  215 (248)
                                     |+.||+    +++.++.++++++ ||||+|+||.+.+|+..... ..+........    ++   
T Consensus       158 ---------------Y~asKaal~~lt~~lA~e~~~~g-IrVN~I~PG~v~T~~~~~~~-~~~~~~~~~~~~~pl~R~~~  220 (261)
T d1geea_         158 ---------------YAASKGGMKLMTETLALEYAPKG-IRVNNIGPGAINTPINAEKF-ADPEQRADVESMIPMGYIGE  220 (261)
T ss_dssp             ---------------HHHHHHHHHHHHHHHHHHHGGGT-CEEEEEEECSBCSGGGHHHH-HSHHHHHHHHTTCTTSSCBC
T ss_pred             ---------------cccCCccchhhHHHHHHHhhhhC-cEEEEEeeCcCcCHhHhhhc-CCHHHHHHHHhcCCCCCCCC
Confidence                           999995    7777777777765 99999999999998753210 11122222221    11   


Q ss_pred             ---------CCCCCCCchhhhhhhhhccceeEE
Q 025755          216 ---------FFTTPSHSYMLERTLVLNQGVRLY  239 (248)
Q Consensus       216 ---------~l~~~~~~~~~g~~l~vd~g~~~~  239 (248)
                               ||.++.+.|+||++|.||||++++
T Consensus       221 pediA~~v~fL~S~~s~~itG~~i~vDGG~sl~  253 (261)
T d1geea_         221 PEEIAAVAAWLASSEASYVTGITLFADGGMTLY  253 (261)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             HHHHHHHHHHHhCchhcCCcCCeEEECCCeeCC
Confidence                     888999999999999999999863

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=100.00  E-value=4.5e-37  Score=248.34  Aligned_cols=213  Identities=17%  Similarity=0.165  Sum_probs=161.9

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhc--CCCCCeEEEEccCCCHHHHHHHhC----
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLE--GASENLQLFKTDLLDYEALCAATA----   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~~Di~d~~~~~~~~~----   76 (248)
                      .|++|+++||||++|||+++++.|+++|++|++++|+.+... ...+.+.  ....++..+++|++|+++++++++    
T Consensus         1 rl~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~-~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~   79 (258)
T d1iy8a_           1 RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLE-ASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTE   79 (258)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHH
Confidence            378999999999999999999999999999999999874322 2222222  234578899999999999888875    


Q ss_pred             ---CCCEEEEccccCCCCC-----CCCccccchhhhHHHHHHHHHHHHh----cCCCEEEEEeccceeccCCCCCCCCcc
Q 025755           77 ---GCTGVFHVACPVPVGK-----VPNPEVQLIDPAVVGTKNVLNSCVK----AKVKRVVVVSSIGAVMLNPNWPKGQVM  144 (248)
Q Consensus        77 ---~id~vi~~ag~~~~~~-----~~~~~~~~~~~n~~g~~~~~~~~~~----~~~~~iV~vSS~~~~~~~~~~~~~~~~  144 (248)
                         ++|++|||||+.....     ..++|+..+++|+.++.++.+++.+    .+.++||++||..+..+.+....    
T Consensus        80 ~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~----  155 (258)
T d1iy8a_          80 RFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSG----  155 (258)
T ss_dssp             HHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCSSBHH----
T ss_pred             HhCCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhccCCCCchH----
Confidence               5899999999764321     2345678999999999888877644    46789999999888777655333    


Q ss_pred             CCCCCCchhhhccccchHHHHHH----HHHHHHHHHHHhCCccEEEEccCeeecCCCCCC-----CCccHHHHHHHHcC-
Q 025755          145 DEECWSDEEFCKATENYYCLAKT----IAEIQALEYAKRGELDIVTVCPSIVIGPMLQPT-----INTSSLLLLGFLKG-  214 (248)
Q Consensus       145 ~e~~~~~~~~~~~~~~~Y~~sK~----~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~-----~~~~~~~~~~~~~~-  214 (248)
                                       |+.||+    +++.++.++++++ ||||+|+||.+.+|+....     ........+.+... 
T Consensus       156 -----------------Y~asKaal~~lt~~lA~el~~~g-IrVN~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (258)
T d1iy8a_         156 -----------------YAAAKHGVVGLTRNSAVEYGRYG-IRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVN  217 (258)
T ss_dssp             -----------------HHHHHHHHHHHHHHHHHHHGGGT-CEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTC
T ss_pred             -----------------HHHHHHHHHHHHHHHHHHhCccC-ceEEEEeeCcccCHHHHHHHhhcCcccHHHHHHHHHhcC
Confidence                             999995    7777788887764 9999999999999863211     01112222222211 


Q ss_pred             ---C------------CCCCCCCchhhhhhhhhccceeE
Q 025755          215 ---F------------FFTTPSHSYMLERTLVLNQGVRL  238 (248)
Q Consensus       215 ---~------------~l~~~~~~~~~g~~l~vd~g~~~  238 (248)
                         +            ||.++.+.|+||++|.||||+++
T Consensus       218 pl~R~~~p~dvA~~v~fL~S~~s~~itG~~i~VDGG~sa  256 (258)
T d1iy8a_         218 PSKRYGEAPEIAAVVAFLLSDDASYVNATVVPIDGGQSA  256 (258)
T ss_dssp             TTCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTTTT
T ss_pred             CCCCCcCHHHHHHHHHHHhCchhcCCcCceEEcCcchhc
Confidence               1            88899999999999999999874

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=100.00  E-value=3.4e-37  Score=249.29  Aligned_cols=214  Identities=17%  Similarity=0.142  Sum_probs=163.4

Q ss_pred             CCCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-----
Q 025755            2 SGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-----   76 (248)
Q Consensus         2 ~~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-----   76 (248)
                      .+|+||++|||||++|||++++++|+++|++|++.+|+.++ .++..+++.....++.++.+|++|+++++++++     
T Consensus         4 f~L~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~-l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~   82 (259)
T d2ae2a_           4 WNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKE-LNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANH   82 (259)
T ss_dssp             TCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHH-HHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHH-HHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHH
Confidence            35899999999999999999999999999999999998643 344455555556788899999999998887753     


Q ss_pred             ---CCCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHH----hcCCCEEEEEeccceeccCCCCCCCCccC
Q 025755           77 ---GCTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCV----KAKVKRVVVVSSIGAVMLNPNWPKGQVMD  145 (248)
Q Consensus        77 ---~id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~----~~~~~~iV~vSS~~~~~~~~~~~~~~~~~  145 (248)
                         .+|++|||||.......    .++|+.++++|+.++.++.+++.    +.+.++||++||..+..+.+...      
T Consensus        83 ~~~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~------  156 (259)
T d2ae2a_          83 FHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEA------  156 (259)
T ss_dssp             TTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCTTCH------
T ss_pred             hCCCceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhccccccccccccccccccccc------
Confidence               48999999998665422    34567899999999887777664    44678999999988776665433      


Q ss_pred             CCCCCchhhhccccchHHHHHH----HHHHHHHHHHHhCCccEEEEccCeeecCCCCCCC--CccHHHHHHHHc----CC
Q 025755          146 EECWSDEEFCKATENYYCLAKT----IAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTI--NTSSLLLLGFLK----GF  215 (248)
Q Consensus       146 e~~~~~~~~~~~~~~~Y~~sK~----~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~--~~~~~~~~~~~~----~~  215 (248)
                                     +|+.||+    +++.++.+++++ +||||+|+||.+.+|+.....  ......+.++..    ++
T Consensus       157 ---------------~Y~asKaal~~lt~~lA~el~~~-gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~pl~R  220 (259)
T d2ae2a_         157 ---------------VYGATKGAMDQLTRCLAFEWAKD-NIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRR  220 (259)
T ss_dssp             ---------------HHHHHHHHHHHHHHHHHHHTGGG-TEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTTCS
T ss_pred             ---------------chHHHHHHHHHHHHHHHHHhCcC-ceEEEEeeeCcccCHHHHhhhhchhhHHHHHHHHhcCCCCC
Confidence                           3999996    666666666665 599999999999998643211  111222222222    21


Q ss_pred             ------------CCCCCCCchhhhhhhhhccceeE
Q 025755          216 ------------FFTTPSHSYMLERTLVLNQGVRL  238 (248)
Q Consensus       216 ------------~l~~~~~~~~~g~~l~vd~g~~~  238 (248)
                                  ||.++.+.|+||++|.||||+.+
T Consensus       221 ~g~pedvA~~v~fL~S~~s~~itG~~i~VDGG~~a  255 (259)
T d2ae2a_         221 MGEPKELAAMVAFLCFPAASYVTGQIIYVDGGLMA  255 (259)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             CcCHHHHHHHHHHHhCchhCCCcCcEEEECCCeEe
Confidence                        78899999999999999999864

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=100.00  E-value=4.1e-37  Score=249.16  Aligned_cols=213  Identities=15%  Similarity=0.119  Sum_probs=157.4

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcC-CCCCeEEEEccCCCHHHHHHHhC------
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEG-ASENLQLFKTDLLDYEALCAATA------   76 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Di~d~~~~~~~~~------   76 (248)
                      |+||++|||||++|||++++++|+++|++|++++|+..+..+...+.+.. ...++.++.+|++|+++++++++      
T Consensus         2 L~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   81 (260)
T d1x1ta1           2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM   81 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            79999999999999999999999999999999999864333333333322 24578999999999999988875      


Q ss_pred             -CCCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHH----hcCCCEEEEEeccceeccCCCCCCCCccCCC
Q 025755           77 -GCTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCV----KAKVKRVVVVSSIGAVMLNPNWPKGQVMDEE  147 (248)
Q Consensus        77 -~id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~----~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~  147 (248)
                       ++|++|||||.......    .+.|...+++|+.++.++.+++.    +.+.++||++||..+..+.+....       
T Consensus        82 G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~-------  154 (260)
T d1x1ta1          82 GRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSA-------  154 (260)
T ss_dssp             SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHH-------
T ss_pred             CCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccccceeccCCcch-------
Confidence             58999999998765422    34567889999999877766654    446789999999988777665333       


Q ss_pred             CCCchhhhccccchHHHHHH----HHHHHHHHHHHhCCccEEEEccCeeecCCCCCCCCc------------cHH-HHHH
Q 025755          148 CWSDEEFCKATENYYCLAKT----IAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTINT------------SSL-LLLG  210 (248)
Q Consensus       148 ~~~~~~~~~~~~~~Y~~sK~----~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~~------------~~~-~~~~  210 (248)
                                    |+.||+    +++.++.+++++ |||||+|+||.+.+|+.......            ... +...
T Consensus       155 --------------Y~asKaal~~lt~~lA~el~~~-gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (260)
T d1x1ta1         155 --------------YVAAKHGVVGFTKVTALETAGQ-GITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEK  219 (260)
T ss_dssp             --------------HHHHHHHHHHHHHHHHHHHTTT-TEEEEEEEECCBCC------------------------CHHHH
T ss_pred             --------------hhhhhhhHHHhHHHHHHHhchh-CcEEEEEecCCCCChhhhhhhhhhhhhcCCChHHHHHHHHHhc
Confidence                          999996    667777777655 59999999999999875432100            000 1111


Q ss_pred             HHcCC------------CCCCCCCchhhhhhhhhccceeE
Q 025755          211 FLKGF------------FFTTPSHSYMLERTLVLNQGVRL  238 (248)
Q Consensus       211 ~~~~~------------~l~~~~~~~~~g~~l~vd~g~~~  238 (248)
                      ...++            ||.++.+.|+||++|.||||+++
T Consensus       220 ~Pl~R~g~pediA~~v~fL~S~~a~~itG~~i~vDGG~ta  259 (260)
T d1x1ta1         220 QPSLQFVTPEQLGGTAVFLASDAAAQITGTTVSVDGGWTA  259 (260)
T ss_dssp             CTTCCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             CCCCCCcCHHHHHHHHHHHhChhhCCCcCCEEEECcchhc
Confidence            11122            78889999999999999999864

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=5.6e-37  Score=245.71  Aligned_cols=207  Identities=20%  Similarity=0.214  Sum_probs=160.9

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC------
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA------   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~------   76 (248)
                      +|+||+++||||++|||+++++.|+++|++|++++|+.+. .+...+++   ..+...+.+|++|+++++++++      
T Consensus         1 dl~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~-l~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   76 (243)
T d1q7ba_           1 NFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENG-AQAISDYL---GANGKGLMLNVTDPASIESVLEKIRAEF   76 (243)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHH-HHHHHHHH---GGGEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHH-HHHHHHHh---CCCCcEEEEEecCHHHhhhhhhhhhccc
Confidence            4899999999999999999999999999999999998642 22333333   3467889999999999888875      


Q ss_pred             -CCCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHH----hcCCCEEEEEeccceeccCCCCCCCCccCCC
Q 025755           77 -GCTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCV----KAKVKRVVVVSSIGAVMLNPNWPKGQVMDEE  147 (248)
Q Consensus        77 -~id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~----~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~  147 (248)
                       ++|++|||||.......    .++|+..+++|+.++..+.+++.    +.+.++||++||..+..+.+....       
T Consensus        77 g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~~~~-------  149 (243)
T d1q7ba_          77 GEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQAN-------  149 (243)
T ss_dssp             CSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHH-------
T ss_pred             CCcceehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhhcCCCCCCHH-------
Confidence             58999999998765432    34567889999999887777764    446789999999888777665433       


Q ss_pred             CCCchhhhccccchHHHHHH----HHHHHHHHHHHhCCccEEEEccCeeecCCCCCCCCccHHHHHHHHc----CC----
Q 025755          148 CWSDEEFCKATENYYCLAKT----IAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLK----GF----  215 (248)
Q Consensus       148 ~~~~~~~~~~~~~~Y~~sK~----~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~----~~----  215 (248)
                                    |+.||+    +++.++.++++++ ||||+|+||.+.+|+.....   ......+..    ++    
T Consensus       150 --------------Y~asKaal~~lt~~lA~ela~~g-IrVN~I~PG~i~T~~~~~~~---~~~~~~~~~~~pl~R~~~p  211 (243)
T d1q7ba_         150 --------------YAAAKAGLIGFSKSLAREVASRG-ITVNVVAPGFIETDMTRALS---DDQRAGILAQVPAGRLGGA  211 (243)
T ss_dssp             --------------HHHHHHHHHHHHHHHHHHHGGGT-EEEEEEEECSBCCHHHHTSC---HHHHHHHHTTCTTSSCBCH
T ss_pred             --------------HHHHHHHHHHHHHHHHHHhCccC-eEEEEEecceEechhhhhhh---hhHHHHHHhcCCCCCCCCH
Confidence                          999995    6777777777664 99999999999998754321   111222211    11    


Q ss_pred             --------CCCCCCCchhhhhhhhhccceeE
Q 025755          216 --------FFTTPSHSYMLERTLVLNQGVRL  238 (248)
Q Consensus       216 --------~l~~~~~~~~~g~~l~vd~g~~~  238 (248)
                              ||.++.+.|+|||+|.||||+.+
T Consensus       212 edvA~~v~fL~S~~s~~itGq~i~vdGG~~~  242 (243)
T d1q7ba_         212 QEIANAVAFLASDEAAYITGETLHVNGGMYM  242 (243)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEESTTSSC
T ss_pred             HHHHHHHHHHhCchhcCCcCCeEEECCCeEe
Confidence                    78889999999999999999864

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=100.00  E-value=4.5e-36  Score=242.36  Aligned_cols=210  Identities=15%  Similarity=0.191  Sum_probs=160.6

Q ss_pred             CCCCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC----
Q 025755            1 MSGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA----   76 (248)
Q Consensus         1 m~~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~----   76 (248)
                      |. |++|+++||||++|||+++++.|+++|++|++++|+.++ .....+++   ..++.++.+|++|+++++++++    
T Consensus         1 M~-L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~-l~~~~~~~---~~~~~~~~~Dvt~~~~v~~~~~~~~~   75 (256)
T d1k2wa_           1 MR-LDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEA-ARATAAEI---GPAACAIALDVTDQASIDRCVAELLD   75 (256)
T ss_dssp             CT-TTTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHH-HHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CC-CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHH-HHHHHHHh---CCceEEEEeeCCCHHHHHHHHHHHHH
Confidence            55 999999999999999999999999999999999998643 33333333   4678999999999999988875    


Q ss_pred             ---CCCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHHh----c-CCCEEEEEeccceeccCCCCCCCCcc
Q 025755           77 ---GCTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCVK----A-KVKRVVVVSSIGAVMLNPNWPKGQVM  144 (248)
Q Consensus        77 ---~id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~~----~-~~~~iV~vSS~~~~~~~~~~~~~~~~  144 (248)
                         ++|++|||||.......    .++|+..+++|+.++..+.+++.+    . +.++||++||..+..+.+....    
T Consensus        76 ~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~----  151 (256)
T d1k2wa_          76 RWGSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRGEALVGV----  151 (256)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTCHH----
T ss_pred             HhCCccEEEeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhccccccccc----
Confidence               58999999998664422    345678899999999888876543    2 4589999999887776655333    


Q ss_pred             CCCCCCchhhhccccchHHHHHH----HHHHHHHHHHHhCCccEEEEccCeeecCCCCCC------------CCccHHHH
Q 025755          145 DEECWSDEEFCKATENYYCLAKT----IAEIQALEYAKRGELDIVTVCPSIVIGPMLQPT------------INTSSLLL  208 (248)
Q Consensus       145 ~e~~~~~~~~~~~~~~~Y~~sK~----~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~------------~~~~~~~~  208 (248)
                                       |+.||+    +++.++.++++++ ||||+|+||.+.+|+....            ......+.
T Consensus       152 -----------------Y~asKaal~~lt~~lA~el~~~g-IrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (256)
T d1k2wa_         152 -----------------YCATKAAVISLTQSAGLNLIRHG-INVNAIAPGVVDGEHWDGVDAKFADYENLPRGEKKRQVG  213 (256)
T ss_dssp             -----------------HHHHHHHHHHHHHHHHHHHGGGT-EEEEEEEECCBCCTTHHHHHHHHHHHHTCCTTHHHHHHH
T ss_pred             -----------------hhhhhhHHHHHHHHHHHHhcccC-eEEEEEecCCCCchhhhhhhhhhhhhccCChHHHHHHHH
Confidence                             999995    7777777777754 9999999999999874311            00011111


Q ss_pred             HHHHcCC------------CCCCCCCchhhhhhhhhcccee
Q 025755          209 LGFLKGF------------FFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       209 ~~~~~~~------------~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                      ....-++            ||.++.+.|+||++|.||||..
T Consensus       214 ~~~PlgR~~~p~evA~~v~fL~S~~a~~iTG~~i~vDGG~~  254 (256)
T d1k2wa_         214 AAVPFGRMGRAEDLTGMAIFLATPEADYIVAQTYNVDGGNW  254 (256)
T ss_dssp             HHSTTSSCBCHHHHHHHHHHTTSGGGTTCCSCEEEESTTSS
T ss_pred             hcCCCCCCcCHHHHHHHHHHHhCchhCCccCceEEECcchh
Confidence            1111122            8899999999999999999964

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=4.9e-37  Score=245.04  Aligned_cols=199  Identities=19%  Similarity=0.172  Sum_probs=151.4

Q ss_pred             CCCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-----
Q 025755            2 SGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-----   76 (248)
Q Consensus         2 ~~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-----   76 (248)
                      ++|++|++|||||++|||++++++|+++|++|++++|+...            ..++..+++|++|+++++++++     
T Consensus         3 psl~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~------------~~~~~~~~~Dv~~~~~v~~~~~~~~~~   70 (237)
T d1uzma1           3 PPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGA------------PKGLFGVEVDVTDSDAVDRAFTAVEEH   70 (237)
T ss_dssp             CCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCC------------CTTSEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcch------------hcCceEEEEecCCHHHHHHHHHHHHHh
Confidence            46999999999999999999999999999999999998742            2356789999999999888775     


Q ss_pred             --CCCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHH----HhcCCCEEEEEeccceeccCCCCCCCCccCC
Q 025755           77 --GCTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSC----VKAKVKRVVVVSSIGAVMLNPNWPKGQVMDE  146 (248)
Q Consensus        77 --~id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~----~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e  146 (248)
                        ++|++|||||.......    .++|+..+++|+.++..+.+++    ++.+.++||++||..+..+.+....      
T Consensus        71 ~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~------  144 (237)
T d1uzma1          71 QGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQAN------  144 (237)
T ss_dssp             HSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----CCHH------
T ss_pred             cCCceEEEeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcchhhccCCcccHH------
Confidence              58999999998654422    3456788999999987666654    4557789999999888776654333      


Q ss_pred             CCCCchhhhccccchHHHHHH----HHHHHHHHHHHhCCccEEEEccCeeecCCCCCCCCccHHHHHHHH----cCC---
Q 025755          147 ECWSDEEFCKATENYYCLAKT----IAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTINTSSLLLLGFL----KGF---  215 (248)
Q Consensus       147 ~~~~~~~~~~~~~~~Y~~sK~----~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~----~~~---  215 (248)
                                     |+.||+    +++.++.++++++ ||||+|+||.+.+++.....   ........    .++   
T Consensus       145 ---------------Y~asKaal~~lt~~lA~e~~~~g-IrVN~I~PG~v~T~~~~~~~---~~~~~~~~~~~pl~R~~~  205 (237)
T d1uzma1         145 ---------------YAASKAGVIGMARSIARELSKAN-VTANVVAPGYIDTDMTRALD---ERIQQGALQFIPAKRVGT  205 (237)
T ss_dssp             ---------------HHHHHHHHHHHHHHHHHHHGGGT-EEEEEEEECSBCCHHHHHSC---HHHHHHHGGGCTTCSCBC
T ss_pred             ---------------HHHHHHHHHHHHHHHHhhhhcCC-ceeeeeeeCcCCChhhhccC---HHHHHHHHhcCCCCCCcC
Confidence                           999996    6666777777654 99999999999998754221   11111111    111   


Q ss_pred             ---------CCCCCCCchhhhhhhhhcccee
Q 025755          216 ---------FFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       216 ---------~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                               ||.++.+.|+||++|.||||.+
T Consensus       206 pedvA~~v~fL~S~~s~~itG~~i~vdGG~~  236 (237)
T d1uzma1         206 PAEVAGVVSFLASEDASYISGAVIPVDGGMG  236 (237)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred             HHHHHHHHHHHhCchhcCCcCCeEEECCCCC
Confidence                     8889999999999999999975

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=2.6e-36  Score=241.61  Aligned_cols=209  Identities=16%  Similarity=0.171  Sum_probs=162.3

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC------
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA------   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~------   76 (248)
                      .|++|+++||||++|||+++++.|+++|++|++++|+.++ .+...+++   .++..++++|++|+++++++++      
T Consensus         3 ~L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~-~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   78 (244)
T d1nffa_           3 RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEE-GKAMAAEL---ADAARYVHLDVTQPAQWKAAVDTAVTAF   78 (244)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHH-HHHHHHHT---GGGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHH-HHHHHHHh---hCcceEEEeecCCHHHHHHHHHHHHHHh
Confidence            3899999999999999999999999999999999998743 22333333   3568899999999999888875      


Q ss_pred             -CCCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHH----hcCCCEEEEEeccceeccCCCCCCCCccCCC
Q 025755           77 -GCTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCV----KAKVKRVVVVSSIGAVMLNPNWPKGQVMDEE  147 (248)
Q Consensus        77 -~id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~----~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~  147 (248)
                       .+|++|||||.......    .++|+..+++|+.++.++.+++.    +.+.++||++||..+..+.+...        
T Consensus        79 g~idilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~--------  150 (244)
T d1nffa_          79 GGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACH--------  150 (244)
T ss_dssp             SCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBH--------
T ss_pred             CCCeEEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEecccccccccccccc--------
Confidence             58999999998765432    24567899999999888777664    34668999999988877665433        


Q ss_pred             CCCchhhhccccchHHHHHH----HHHHHHHHHHHhCCccEEEEccCeeecCCCCCCCC----------ccHHHHHHHHc
Q 025755          148 CWSDEEFCKATENYYCLAKT----IAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTIN----------TSSLLLLGFLK  213 (248)
Q Consensus       148 ~~~~~~~~~~~~~~Y~~sK~----~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~----------~~~~~~~~~~~  213 (248)
                                   .|+.||+    +++.++.++++++ ||||+|+||.+.+|+......          ..+.-+..+..
T Consensus       151 -------------~Y~asKaal~~ltk~lA~el~~~g-IrVN~I~PG~i~T~~~~~~~~~~~~~pl~R~~~p~diA~~v~  216 (244)
T d1nffa_         151 -------------GYTATKFAVRGLTKSTALELGPSG-IRVNSIHPGLVKTPMTDWVPEDIFQTALGRAAEPVEVSNLVV  216 (244)
T ss_dssp             -------------HHHHHHHHHHHHHHHHHHHHGGGT-EEEEEEEECCBCSGGGTTSCTTCSCCSSSSCBCHHHHHHHHH
T ss_pred             -------------chhhHHHHHHHHHHHHHHHhcccC-EEEEEEeeCCccChhHhhhhHHHHhccccCCCCHHHHHHHHH
Confidence                         3999995    7777777777765 999999999999987543211          12233333332


Q ss_pred             CCCCCCCCCchhhhhhhhhccceeEE
Q 025755          214 GFFFTTPSHSYMLERTLVLNQGVRLY  239 (248)
Q Consensus       214 ~~~l~~~~~~~~~g~~l~vd~g~~~~  239 (248)
                        ||.++.+.|+|||+|.||||+.+.
T Consensus       217 --fL~s~~s~~itG~~i~vDGG~~ag  240 (244)
T d1nffa_         217 --YLASDESSYSTGAEFVVDGGTVAG  240 (244)
T ss_dssp             --HHHSGGGTTCCSCEEEESTTGGGS
T ss_pred             --HHhChhhCCCcCCEEEECCCeecc
Confidence              888999999999999999998753

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.8e-36  Score=241.83  Aligned_cols=208  Identities=22%  Similarity=0.197  Sum_probs=159.6

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC---CCC
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA---GCT   79 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~---~id   79 (248)
                      .|+||++|||||++|||+++++.|+++|++|++++|+.++. +...++    ..++..+.+|++|.++++++++   ++|
T Consensus         4 ~L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l-~~~~~~----~~~~~~~~~Dv~d~~~v~~~~~~~g~iD   78 (244)
T d1pr9a_           4 FLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADL-DSLVRE----CPGIEPVCVDLGDWEATERALGSVGPVD   78 (244)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHH----STTCEEEECCTTCHHHHHHHHTTCCCCC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHH-HHHHHh----cCCCeEEEEeCCCHHHHHHHHHHhCCce
Confidence            37999999999999999999999999999999999986432 222222    3467889999999999999887   579


Q ss_pred             EEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHHh-----cCCCEEEEEeccceeccCCCCCCCCccCCCCCC
Q 025755           80 GVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCVK-----AKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWS  150 (248)
Q Consensus        80 ~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~~-----~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~  150 (248)
                      ++|||||.......    .++|+..+++|+.++..+.+++.+     .+.++||++||..+..+.+...           
T Consensus        79 ilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~~~-----------  147 (244)
T d1pr9a_          79 LLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHS-----------  147 (244)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBH-----------
T ss_pred             EEEeccccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeecccccccccccchh-----------
Confidence            99999998664422    355678899999998887776644     2568999999988766665433           


Q ss_pred             chhhhccccchHHHHHH----HHHHHHHHHHHhCCccEEEEccCeeecCCCCCCCCccHHHHHHHHc----CC-------
Q 025755          151 DEEFCKATENYYCLAKT----IAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLK----GF-------  215 (248)
Q Consensus       151 ~~~~~~~~~~~Y~~sK~----~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~----~~-------  215 (248)
                                .|+.||+    +++.++.++++++ ||||+|+||.+.+|+....... ....+....    ++       
T Consensus       148 ----------~Y~asKaal~~lt~~lA~el~~~g-IrvN~I~PG~v~T~~~~~~~~~-~~~~~~~~~~~pl~R~~~peev  215 (244)
T d1pr9a_         148 ----------VYCSTKGALDMLTKVMALELGPHK-IRVNAVNPTVVMTSMGQATWSD-PHKAKTMLNRIPLGKFAEVEHV  215 (244)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHHGGGT-EEEEEEEECCBCSHHHHTTSCS-HHHHHHHHTTCTTCSCBCHHHH
T ss_pred             ----------hhhhhHHHHHHHHHHHHHHhCCCc-EEEEEEeeCcCcChHHhhhccC-hHHHHHHHhcCCCCCCcCHHHH
Confidence                      3999995    6777777777664 9999999999999875432111 122222222    22       


Q ss_pred             -----CCCCCCCchhhhhhhhhccceeE
Q 025755          216 -----FFTTPSHSYMLERTLVLNQGVRL  238 (248)
Q Consensus       216 -----~l~~~~~~~~~g~~l~vd~g~~~  238 (248)
                           ||.++.+.|+||++|.||||+.+
T Consensus       216 A~~v~fL~S~~a~~itG~~i~vDGG~~A  243 (244)
T d1pr9a_         216 VNAILFLLSDRSGMTTGSTLPVEGGFWA  243 (244)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHHHhCchhCCcCCcEEEECccHhh
Confidence                 78899999999999999999863

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=100.00  E-value=1.1e-35  Score=240.58  Aligned_cols=210  Identities=17%  Similarity=0.154  Sum_probs=161.7

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC------
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA------   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~------   76 (248)
                      .|+||++|||||++|||+++++.|+++|++|++++|+.+ ..+...+.+.....++..+.+|++|+++++++++      
T Consensus         2 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~-~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (260)
T d1zema1           2 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNRE-ALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDF   80 (260)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHH-HHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHH-HHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            589999999999999999999999999999999999864 3344455566666789999999999999888875      


Q ss_pred             -CCCEEEEccccCCCC-C----CCCccccchhhhHHHHHHHHHHHHh----cCCCEEEEEeccceeccCCCCCCCCccCC
Q 025755           77 -GCTGVFHVACPVPVG-K----VPNPEVQLIDPAVVGTKNVLNSCVK----AKVKRVVVVSSIGAVMLNPNWPKGQVMDE  146 (248)
Q Consensus        77 -~id~vi~~ag~~~~~-~----~~~~~~~~~~~n~~g~~~~~~~~~~----~~~~~iV~vSS~~~~~~~~~~~~~~~~~e  146 (248)
                       ++|++|||||..... .    ..+.|+..+++|+.++..+.+++.+    .+.++||++||..+..+.+....      
T Consensus        81 g~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~~~~------  154 (260)
T d1zema1          81 GKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAA------  154 (260)
T ss_dssp             SCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTTBHH------
T ss_pred             CCCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhhccCCcchHH------
Confidence             589999999976432 1    1345677899999998887777644    46789999999888777655333      


Q ss_pred             CCCCchhhhccccchHHHHHH----HHHHHHHHHHHhCCccEEEEccCeeecCCCC-------------CCCCccHHHHH
Q 025755          147 ECWSDEEFCKATENYYCLAKT----IAEIQALEYAKRGELDIVTVCPSIVIGPMLQ-------------PTINTSSLLLL  209 (248)
Q Consensus       147 ~~~~~~~~~~~~~~~Y~~sK~----~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~-------------~~~~~~~~~~~  209 (248)
                                     |+.||+    +++.++.++++++ ||||+|+||.+.+|+..             ..........+
T Consensus       155 ---------------Y~asKaal~~ltk~lA~el~~~g-IrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (260)
T d1zema1         155 ---------------YGTSKGAIIALTETAALDLAPYN-IRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQ  218 (260)
T ss_dssp             ---------------HHHHHHHHHHHHHHHHHHHGGGT-EEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHH
T ss_pred             ---------------HHHHHHHHHHHHHHHHHHhhhhC-CEEEEeccCcccCcchhhcchhhhhhhcccccccCHHHHHH
Confidence                           999995    7777777777764 99999999999998521             01111112222


Q ss_pred             HHH----cCC------------CCCCCCCchhhhhhhhhccc
Q 025755          210 GFL----KGF------------FFTTPSHSYMLERTLVLNQG  235 (248)
Q Consensus       210 ~~~----~~~------------~l~~~~~~~~~g~~l~vd~g  235 (248)
                      .+.    -++            ||.++.+.|+||++|.||||
T Consensus       219 ~~~~~~Pl~R~g~pedvA~~v~fL~S~~s~~itG~~i~VDGG  260 (260)
T d1zema1         219 QMIGSVPMRRYGDINEIPGVVAFLLGDDSSFMTGVNLPIAGG  260 (260)
T ss_dssp             HHHHTSTTSSCBCGGGSHHHHHHHHSGGGTTCCSCEEEESCC
T ss_pred             HHHhcCCCCCCcCHHHHHHHHHHHhCchhcCccCCeEEeCCC
Confidence            222    121            78888999999999999998

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=100.00  E-value=5.9e-37  Score=246.81  Aligned_cols=208  Identities=15%  Similarity=0.119  Sum_probs=161.6

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC------
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA------   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~------   76 (248)
                      +|++|++|||||++|||++++++|+++|++|++++|+.++ .....+++   ..++.++++|++|+++++++++      
T Consensus         2 dL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~-~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   77 (254)
T d1hdca_           2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEE-GAATAREL---GDAARYQHLDVTIEEDWQRVVAYAREEF   77 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHH-HHHHHHTT---GGGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHH-HHHHHHHh---CCceEEEEcccCCHHHHHHHHHHHHHHc
Confidence            5899999999999999999999999999999999998643 22333332   4678999999999999988875      


Q ss_pred             -CCCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHHh----cCCCEEEEEeccceeccCCCCCCCCccCCC
Q 025755           77 -GCTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCVK----AKVKRVVVVSSIGAVMLNPNWPKGQVMDEE  147 (248)
Q Consensus        77 -~id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~~----~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~  147 (248)
                       ++|++|||||.......    .++|+..+++|+.++.++.+++.+    .+.++||++||..+..+.+....       
T Consensus        78 g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~~~~~~~~~-------  150 (254)
T d1hdca_          78 GSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSS-------  150 (254)
T ss_dssp             SCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHH-------
T ss_pred             CCccEEEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhcccccchhh-------
Confidence             58999999998765422    345678899999998888777654    46789999999888777655333       


Q ss_pred             CCCchhhhccccchHHHHHH----HHHHHHHHHHHhCCccEEEEccCeeecCCCCCC-----C---------C--ccHHH
Q 025755          148 CWSDEEFCKATENYYCLAKT----IAEIQALEYAKRGELDIVTVCPSIVIGPMLQPT-----I---------N--TSSLL  207 (248)
Q Consensus       148 ~~~~~~~~~~~~~~Y~~sK~----~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~-----~---------~--~~~~~  207 (248)
                                    |+.||+    +++.++.++++++ ||||+|+||.+.+|+....     .         +  ..+.-
T Consensus       151 --------------Y~asKaal~~lt~~lA~e~a~~g-IrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~pl~R~g~~Ped  215 (254)
T d1hdca_         151 --------------YGASKWGVRGLSKLAAVELGTDR-IRVNSVHPGMTYTPMTAETGIRQGEGNYPNTPMGRVGNEPGE  215 (254)
T ss_dssp             --------------HHHHHHHHHHHHHHHHHHHGGGT-EEEEEEEECSBCCHHHHHHTCCCSTTSCTTSTTSSCB-CHHH
T ss_pred             --------------HHHHHHHHHHHHHHHHHHhCCCc-eEEEEeeeCcccCccchhcCHHHHHHHHhCCCCCCCCCCHHH
Confidence                          999995    7777777777764 9999999999998743110     0         0  11333


Q ss_pred             HHHHHcCCCCCCCCCchhhhhhhhhccceeE
Q 025755          208 LLGFLKGFFFTTPSHSYMLERTLVLNQGVRL  238 (248)
Q Consensus       208 ~~~~~~~~~l~~~~~~~~~g~~l~vd~g~~~  238 (248)
                      +..+..  ||.++.+.|+||++|.||||+++
T Consensus       216 vA~~v~--fL~S~~a~~itG~~i~vDGG~t~  244 (254)
T d1hdca_         216 IAGAVV--KLLSDTSSYVTGAELAVDGGWTT  244 (254)
T ss_dssp             HHHHHH--HHHSGGGTTCCSCEEEESTTTTT
T ss_pred             HHHHHH--HHhchhhCCCCCceEEeCCCccC
Confidence            333333  88899999999999999999874

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.4e-36  Score=243.22  Aligned_cols=210  Identities=20%  Similarity=0.130  Sum_probs=159.6

Q ss_pred             CCCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC---CC
Q 025755            2 SGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA---GC   78 (248)
Q Consensus         2 ~~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~---~i   78 (248)
                      ++|+||++|||||++|||++++++|+++|++|++++|+.++. ....++    ..++..+.+|++|.++++++++   ++
T Consensus         1 mdl~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l-~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~g~i   75 (242)
T d1cyda_           1 LNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDL-VSLAKE----CPGIEPVCVDLGDWDATEKALGGIGPV   75 (242)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHH----STTCEEEECCTTCHHHHHHHHTTCCCC
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHH-HHHHHh----cCCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence            359999999999999999999999999999999999986432 222222    3468889999999999999987   47


Q ss_pred             CEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHHh-----cCCCEEEEEeccceeccCCCCCCCCccCCCCC
Q 025755           79 TGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCVK-----AKVKRVVVVSSIGAVMLNPNWPKGQVMDEECW  149 (248)
Q Consensus        79 d~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~~-----~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~  149 (248)
                      |++|||||.......    .+.|+..+++|+.++..+.+++.+     .+.++||++||..+..+.++..          
T Consensus        76 DilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~----------  145 (242)
T d1cyda_          76 DLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLI----------  145 (242)
T ss_dssp             SEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBH----------
T ss_pred             eEEEECCccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhccccCCccc----------
Confidence            999999997654322    344677899999999888877643     2457999999987766665433          


Q ss_pred             CchhhhccccchHHHHHH----HHHHHHHHHHHhCCccEEEEccCeeecCCCCCCC---CccHHHHHHHHcCC-------
Q 025755          150 SDEEFCKATENYYCLAKT----IAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTI---NTSSLLLLGFLKGF-------  215 (248)
Q Consensus       150 ~~~~~~~~~~~~Y~~sK~----~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~---~~~~~~~~~~~~~~-------  215 (248)
                                 .|+.+|+    +++.++.++++++ ||||+|+||.+.+|+.....   ...........-++       
T Consensus       146 -----------~Y~asKaal~~lt~~lA~e~~~~g-IrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R~~~peev  213 (242)
T d1cyda_         146 -----------TYSSTKGAMTMLTKAMAMELGPHK-IRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPLRKFAEVEDV  213 (242)
T ss_dssp             -----------HHHHHHHHHHHHHHHHHHHHGGGT-EEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHSTTSSCBCHHHH
T ss_pred             -----------cccchHHHHHHHHHHHHHHhCccC-eecccCCCCCccCHHHHhhcCCHHHHHHHHhcCCCCCCcCHHHH
Confidence                       3999995    6777777777665 99999999999998643211   11111222221222       


Q ss_pred             -----CCCCCCCchhhhhhhhhccceeE
Q 025755          216 -----FFTTPSHSYMLERTLVLNQGVRL  238 (248)
Q Consensus       216 -----~l~~~~~~~~~g~~l~vd~g~~~  238 (248)
                           ||.++.+.|+|||+|.||||+.+
T Consensus       214 a~~v~fL~S~~s~~itG~~i~vDGG~~a  241 (242)
T d1cyda_         214 VNSILFLLSDRSASTSGGGILVDAGYLA  241 (242)
T ss_dssp             HHHHHHHHSGGGTTCCSSEEEESTTGGG
T ss_pred             HHHHHHHhCchhcCcCCceEEeCcchhc
Confidence                 88899999999999999999864

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=100.00  E-value=1.6e-35  Score=240.77  Aligned_cols=216  Identities=17%  Similarity=0.178  Sum_probs=162.9

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC------
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA------   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~------   76 (248)
                      .|++|++|||||++|||+++++.|+++|++|++++|+.+. .+...+++. ..+.+.++.+|++|+++++++++      
T Consensus         3 rL~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~-~~~~~~~l~-~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (268)
T d2bgka1           3 RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDH-GQKVCNNIG-SPDVISFVHCDVTKDEDVRNLVDTTIAKH   80 (268)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHH-HHHHHHHHC-CTTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHH-HHHHHHHhc-CCCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            4899999999999999999999999999999999998643 333344443 34568899999999999988875      


Q ss_pred             -CCCEEEEccccCCCCC--C----CCccccchhhhHHHHHHHHHHHH----hcCCCEEEEEeccceeccCCCCCCCCccC
Q 025755           77 -GCTGVFHVACPVPVGK--V----PNPEVQLIDPAVVGTKNVLNSCV----KAKVKRVVVVSSIGAVMLNPNWPKGQVMD  145 (248)
Q Consensus        77 -~id~vi~~ag~~~~~~--~----~~~~~~~~~~n~~g~~~~~~~~~----~~~~~~iV~vSS~~~~~~~~~~~~~~~~~  145 (248)
                       ++|++|||||......  .    .+.|+..+++|+.++..+.+++.    +.+.++||++||..+..+.+..       
T Consensus        81 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~-------  153 (268)
T d2bgka1          81 GKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGV-------  153 (268)
T ss_dssp             SCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTTS-------
T ss_pred             CCcceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCcccccccccccccccc-------
Confidence             5899999999754321  1    23467789999999877777664    4467899999998766554321       


Q ss_pred             CCCCCchhhhccccchHHHHHH----HHHHHHHHHHHhCCccEEEEccCeeecCCCCCCCCccHHHHHHHH------cCC
Q 025755          146 EECWSDEEFCKATENYYCLAKT----IAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTINTSSLLLLGFL------KGF  215 (248)
Q Consensus       146 e~~~~~~~~~~~~~~~Y~~sK~----~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~------~~~  215 (248)
                                   ..+|+.||+    +++.++.++++++ ||||+|+||.+.+|+................      .++
T Consensus       154 -------------~~~Y~asKaal~~lt~~lA~el~~~g-IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~gr  219 (268)
T d2bgka1         154 -------------SHVYTATKHAVLGLTTSLCTELGEYG-IRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGT  219 (268)
T ss_dssp             -------------CHHHHHHHHHHHHHHHHHHHHHGGGT-EEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCSSCSC
T ss_pred             -------------ccccchhHHHHHhCHHHHHHHhChhC-eEEEecCCCCccChHHhhhhcCCHHHHHHHHHhccccCCC
Confidence                         123999995    7777777777654 9999999999999986543222222222211      111


Q ss_pred             ------------CCCCCCCchhhhhhhhhccceeEEEe
Q 025755          216 ------------FFTTPSHSYMLERTLVLNQGVRLYRC  241 (248)
Q Consensus       216 ------------~l~~~~~~~~~g~~l~vd~g~~~~~~  241 (248)
                                  ||.++.+.|+|||+|.||||++....
T Consensus       220 ~~~pedvA~~v~fL~S~~s~~itGq~i~VDGG~t~~~p  257 (268)
T d2bgka1         220 LLRAEDVADAVAYLAGDESKYVSGLNLVIDGGYTRTNP  257 (268)
T ss_dssp             CCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCCT
T ss_pred             CcCHHHHHHHHHHHhChhhCCccCceEEECcCcccCCC
Confidence                        78899999999999999999986543

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=1.2e-35  Score=237.83  Aligned_cols=207  Identities=15%  Similarity=0.135  Sum_probs=156.3

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC------
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA------   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~------   76 (248)
                      .|++|+++||||++|||++++++|+++|++|++++|+.++ .++..+.     -+..++.+|++|+++++++++      
T Consensus         2 ~L~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~-l~~~~~~-----~~~~~~~~Dv~~~~~v~~~~~~~~~~~   75 (242)
T d1ulsa_           2 RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGP-LREAAEA-----VGAHPVVMDVADPASVERGFAEALAHL   75 (242)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHH-HHHHHHT-----TTCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHH-HHHHHHH-----cCCeEEEEecCCHHHHHHHHHHHHHhc
Confidence            4999999999999999999999999999999999998632 2222222     246789999999999988875      


Q ss_pred             -CCCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHHhc----CCCEEEEEeccceeccCCCCCCCCccCCC
Q 025755           77 -GCTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCVKA----KVKRVVVVSSIGAVMLNPNWPKGQVMDEE  147 (248)
Q Consensus        77 -~id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~~~----~~~~iV~vSS~~~~~~~~~~~~~~~~~e~  147 (248)
                       ++|++|||||.......    .+.|+..+++|+.++.++.+++.+.    +.++++++||. ...+.+..         
T Consensus        76 g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss~-~~~~~~~~---------  145 (242)
T d1ulsa_          76 GRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASR-VYLGNLGQ---------  145 (242)
T ss_dssp             SSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCG-GGGCCTTC---------
T ss_pred             CCceEEEECCcccccCchhhCcchhhhccccccchhhhhhhhhccccccccccceeeeeccc-cccCCCCC---------
Confidence             58999999998765422    3456789999999998888877654    55677777774 44454432         


Q ss_pred             CCCchhhhccccchHHHHHH----HHHHHHHHHHHhCCccEEEEccCeeecCCCCCCCCccH-HHHHHHHcCC-------
Q 025755          148 CWSDEEFCKATENYYCLAKT----IAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTINTSS-LLLLGFLKGF-------  215 (248)
Q Consensus       148 ~~~~~~~~~~~~~~Y~~sK~----~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~~~~-~~~~~~~~~~-------  215 (248)
                                  .+|+.||+    +++.++.++++++ ||||+|+||.+.+|+......... .+......++       
T Consensus       146 ------------~~Y~asKaal~~ltk~lA~ela~~g-IrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~pl~R~~~pedi  212 (242)
T d1ulsa_         146 ------------ANYAASMAGVVGLTRTLALELGRWG-IRVNTLAPGFIETRMTAKVPEKVREKAIAATPLGRAGKPLEV  212 (242)
T ss_dssp             ------------HHHHHHHHHHHHHHHHHHHHHGGGT-EEEEEEEECSBCCTTTSSSCHHHHHHHHHTCTTCSCBCHHHH
T ss_pred             ------------cchHHHHHHHHHHHHHHHHHHhhhC-cEEEEEeeCcccChhhhcCCHHHHHHHHhcCCCCCCCCHHHH
Confidence                        23999995    7777788887765 999999999999998764322111 1111111122       


Q ss_pred             -----CCCCCCCchhhhhhhhhccceeE
Q 025755          216 -----FFTTPSHSYMLERTLVLNQGVRL  238 (248)
Q Consensus       216 -----~l~~~~~~~~~g~~l~vd~g~~~  238 (248)
                           ||.++.+.|+||++|.||||+++
T Consensus       213 a~~v~fL~S~~s~~itG~~i~vDGG~t~  240 (242)
T d1ulsa_         213 AYAALFLLSDESSFITGQVLFVDGGRTI  240 (242)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTTTTT
T ss_pred             HHHHHHHhchhhCCCCCcEEEECCCccC
Confidence                 88899999999999999999864

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=100.00  E-value=2.6e-36  Score=243.98  Aligned_cols=210  Identities=20%  Similarity=0.208  Sum_probs=162.3

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-------C
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-------G   77 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-------~   77 (248)
                      .||++|||||++|||+++++.|+++|++|++++|+.+ ..++..+++.....++.++++|++|+++++++++       +
T Consensus         1 DgKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~-~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~   79 (257)
T d2rhca1           1 DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEE-GLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGP   79 (257)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHH-HHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHH-HHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCC
Confidence            4799999999999999999999999999999999864 3344445555556789999999999999988875       5


Q ss_pred             CCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHHhc------CCCEEEEEeccceeccCCCCCCCCccCCC
Q 025755           78 CTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCVKA------KVKRVVVVSSIGAVMLNPNWPKGQVMDEE  147 (248)
Q Consensus        78 id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~~~------~~~~iV~vSS~~~~~~~~~~~~~~~~~e~  147 (248)
                      +|++|||||.......    .++|+..+++|+.++.++++++.+.      +.++||++||..+..+.+....       
T Consensus        80 iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~~~~~~~~-------  152 (257)
T d2rhca1          80 VDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAP-------  152 (257)
T ss_dssp             CSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGTSCCTTCHH-------
T ss_pred             CCEEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCcccccccccccccccccchh-------
Confidence            8999999998654422    3456789999999999999988652      5579999999888777665433       


Q ss_pred             CCCchhhhccccchHHHHHH----HHHHHHHHHHHhCCccEEEEccCeeecCCCCCC--------CCccHHHHHHHHc--
Q 025755          148 CWSDEEFCKATENYYCLAKT----IAEIQALEYAKRGELDIVTVCPSIVIGPMLQPT--------INTSSLLLLGFLK--  213 (248)
Q Consensus       148 ~~~~~~~~~~~~~~Y~~sK~----~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~--------~~~~~~~~~~~~~--  213 (248)
                                    |+.||+    +++.++.+++++ |||||+|+||.+.+|+....        ........+++..  
T Consensus       153 --------------Y~asKaal~~ltk~lA~el~~~-gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~e~~~~~~~~~  217 (257)
T d2rhca1         153 --------------YSASKHGVVGFTKALGLELART-GITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARV  217 (257)
T ss_dssp             --------------HHHHHHHHHHHHHHHHHHTTTS-EEEEEEEEECSBCSHHHHHHHHHHHHHTTCCHHHHHHHHHTTS
T ss_pred             --------------HHHHHHHHHHHHHHHHHHhhhh-CcEEEEEeeCCCCCHHHHHHHhhhhhhcccChHHHHHHHHhcC
Confidence                          999996    555666666554 59999999999998864211        0111223333322  


Q ss_pred             --CC------------CCCCCCCchhhhhhhhhcccee
Q 025755          214 --GF------------FFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       214 --~~------------~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                        ++            ||.++.+.|+||++|.||||.+
T Consensus       218 PlgR~~~pedia~~v~fL~S~~s~~itG~~i~vDGG~~  255 (257)
T d2rhca1         218 PIGRYVQPSEVAEMVAYLIGPGAAAVTAQALNVCGGLG  255 (257)
T ss_dssp             TTSSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTCC
T ss_pred             CCCCCcCHHHHHHHHHHHhCchhcCCcCceEEECcCcc
Confidence              11            8889999999999999999975

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=100.00  E-value=6.6e-36  Score=240.62  Aligned_cols=211  Identities=16%  Similarity=0.147  Sum_probs=158.6

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC------
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA------   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~------   76 (248)
                      .|++|++|||||++|||+++++.|+++|++|++++|+.+ ..+...+.+. ..+++.++++|++|+++++++++      
T Consensus         3 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~-~~~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (251)
T d1zk4a1           3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSD-VGEKAAKSVG-TPDQIQFFQHDSSDEDGWTKLFDATEKAF   80 (251)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHH-HHHHHHHHHC-CTTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHH-HHHHHHHHhC-CCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            389999999999999999999999999999999999864 2333333333 35689999999999999888775      


Q ss_pred             -CCCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHHh----cCC-CEEEEEeccceeccCCCCCCCCccCC
Q 025755           77 -GCTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCVK----AKV-KRVVVVSSIGAVMLNPNWPKGQVMDE  146 (248)
Q Consensus        77 -~id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~~----~~~-~~iV~vSS~~~~~~~~~~~~~~~~~e  146 (248)
                       ++|++|||||.......    .++|...+++|+.++.++.+++.+    .+. ++||++||..+..+.+...       
T Consensus        81 G~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~~~~~~~-------  153 (251)
T d1zk4a1          81 GPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLG-------  153 (251)
T ss_dssp             SSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTTCH-------
T ss_pred             CCceEEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceeccCCCch-------
Confidence             58999999998765432    244667899999999888877654    343 4899999988776665433       


Q ss_pred             CCCCchhhhccccchHHHHHH----HHHHHHHHHH-HhCCccEEEEccCeeecCCCCCCCCc----------------cH
Q 025755          147 ECWSDEEFCKATENYYCLAKT----IAEIQALEYA-KRGELDIVTVCPSIVIGPMLQPTINT----------------SS  205 (248)
Q Consensus       147 ~~~~~~~~~~~~~~~Y~~sK~----~~e~l~~~~~-~~~~i~v~~vrpg~i~g~~~~~~~~~----------------~~  205 (248)
                                    .|+.||+    +++.++.+++ .++|||||+|+||.+.+|+.......                .+
T Consensus       154 --------------~Y~asKaal~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~pl~R~~~p  219 (251)
T d1zk4a1         154 --------------AYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGAEEAMSQRTKTPMGHIGEP  219 (251)
T ss_dssp             --------------HHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTTHHHHHTSTTTCTTSSCBCH
T ss_pred             --------------hHHHHHHHHhcchHHHHHHHhcCCCcEEEEEEeCCCCCChhHHhcCCHHHHHHHHhCCCCCCCcCH
Confidence                          3999996    4555555543 24579999999999999864332110                01


Q ss_pred             HHHHHHHcCCCCCCCCCchhhhhhhhhccceeE
Q 025755          206 LLLLGFLKGFFFTTPSHSYMLERTLVLNQGVRL  238 (248)
Q Consensus       206 ~~~~~~~~~~~l~~~~~~~~~g~~l~vd~g~~~  238 (248)
                      .-+..+..  ||.++.+.|+||++|.||||+++
T Consensus       220 edvA~~v~--fL~S~~s~~itG~~i~vDGG~ta  250 (251)
T d1zk4a1         220 NDIAYICV--YLASNESKFATGSEFVVDGGYTA  250 (251)
T ss_dssp             HHHHHHHH--HHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHHHH--HHhCchhCCCcCcEEEECccccc
Confidence            11111111  88899999999999999999864

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=100.00  E-value=1.5e-35  Score=239.33  Aligned_cols=213  Identities=18%  Similarity=0.185  Sum_probs=161.3

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC------
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA------   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~------   76 (248)
                      +|++|++|||||++|||++++++|+++|++|++++|+..+ .+...+.+......+.++.+|++|.++++++++      
T Consensus         3 ~L~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~-l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~   81 (258)
T d1ae1a_           3 SLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKE-LDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVF   81 (258)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHH-HHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHH-HHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHh
Confidence            5899999999999999999999999999999999998743 334445555566788999999999998887764      


Q ss_pred             --CCCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHHh----cCCCEEEEEeccceeccCCCCCCCCccCC
Q 025755           77 --GCTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCVK----AKVKRVVVVSSIGAVMLNPNWPKGQVMDE  146 (248)
Q Consensus        77 --~id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~~----~~~~~iV~vSS~~~~~~~~~~~~~~~~~e  146 (248)
                        .+|++|||||.......    .++|..++++|+.++..+.+++.+    .+.++||++||..+..+.+....      
T Consensus        82 ~g~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~~~~~~~~~------  155 (258)
T d1ae1a_          82 DGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSL------  155 (258)
T ss_dssp             TSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCTTCHH------
T ss_pred             CCCcEEEeccccccccCccccCCHHHHhhhhhhccccccccccccccccccccccccccccccccccccccchh------
Confidence              37999999998765432    345678899999999888776653    47789999999887766654333      


Q ss_pred             CCCCchhhhccccchHHHHHH----HHHHHHHHHHHhCCccEEEEccCeeecCCCCCCC---CccHHHHHHHH----cCC
Q 025755          147 ECWSDEEFCKATENYYCLAKT----IAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTI---NTSSLLLLGFL----KGF  215 (248)
Q Consensus       147 ~~~~~~~~~~~~~~~Y~~sK~----~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~---~~~~~~~~~~~----~~~  215 (248)
                                     |+.+|+    +++.++.+++++ +||||+|+||.+.+|+.....   .......+++.    -++
T Consensus       156 ---------------Y~~sK~al~~lt~~lA~el~~~-gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~plgR  219 (258)
T d1ae1a_         156 ---------------YSASKGAINQMTKSLACEWAKD-NIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGR  219 (258)
T ss_dssp             ---------------HHHHHHHHHHHHHHHHHHHGGG-TEEEEEEEECSBC-------------CHHHHHHHHHHSTTCS
T ss_pred             ---------------HHHHHHHHHHHHHHHHHhcCcC-cEEEEEEeeCcccCcchhhhhhhhhhhHHHHHHHHhcCCCCC
Confidence                           999995    666667777765 499999999999998754331   12233333332    222


Q ss_pred             ------------CCCCCCCchhhhhhhhhccceeE
Q 025755          216 ------------FFTTPSHSYMLERTLVLNQGVRL  238 (248)
Q Consensus       216 ------------~l~~~~~~~~~g~~l~vd~g~~~  238 (248)
                                  ||.++.+.|+||+.|.||||+++
T Consensus       220 ~~~pediA~~v~fL~S~~s~~itG~~i~vDGG~s~  254 (258)
T d1ae1a_         220 AGKPQEVSALIAFLCFPAASYITGQIIWADGGFTA  254 (258)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             CcCHHHHHHHHHHHhChhhCCCcCcEEEeCCCeec
Confidence                        88899999999999999999886

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=1.1e-35  Score=238.80  Aligned_cols=206  Identities=14%  Similarity=0.110  Sum_probs=156.0

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-------
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-------   76 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-------   76 (248)
                      |+||++|||||++|||+++++.|+++|++|++++|+.+.  .+..+..     +..++++|++|.++++++++       
T Consensus         3 l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~--~~~~~~~-----~~~~~~~Dv~~~~~v~~~~~~~~~~~G   75 (248)
T d2d1ya1           3 FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG--KEVAEAI-----GGAFFQVDLEDERERVRFVEEAAYALG   75 (248)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH--HHHHHHH-----TCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHH--HHHHHHc-----CCeEEEEeCCCHHHHHHHHHHHHHhcC
Confidence            899999999999999999999999999999999998642  2222222     34678999999999888775       


Q ss_pred             CCCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHHh----cCCCEEEEEeccceeccCCCCCCCCccCCCC
Q 025755           77 GCTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCVK----AKVKRVVVVSSIGAVMLNPNWPKGQVMDEEC  148 (248)
Q Consensus        77 ~id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~~----~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~  148 (248)
                      ++|++|||||.......    .++|+..+++|+.++.++.+++.+    .+.++||++||..+..+.+...         
T Consensus        76 ~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~~~~~~~~---------  146 (248)
T d2d1ya1          76 RVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQENA---------  146 (248)
T ss_dssp             CCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCTTBH---------
T ss_pred             CCCeEEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccccccccccccccccccccccc---------
Confidence            58999999998655432    244677899999998887777654    4668999999988877765433         


Q ss_pred             CCchhhhccccchHHHHHH----HHHHHHHHHHHhCCccEEEEccCeeecCCCCCC------C-CccHHHHHHHHcCC--
Q 025755          149 WSDEEFCKATENYYCLAKT----IAEIQALEYAKRGELDIVTVCPSIVIGPMLQPT------I-NTSSLLLLGFLKGF--  215 (248)
Q Consensus       149 ~~~~~~~~~~~~~Y~~sK~----~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~------~-~~~~~~~~~~~~~~--  215 (248)
                                  +|+.||+    +++.++.++++++ ||||+|+||.+.+|+....      . .....+.....-++  
T Consensus       147 ------------~Y~asKaal~~ltk~lA~el~~~g-IrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~  213 (248)
T d2d1ya1         147 ------------AYNASKGGLVNLTRSLALDLAPLR-IRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLG  213 (248)
T ss_dssp             ------------HHHHHHHHHHHHHHHHHHHHGGGT-EEEEEEEECSBCCHHHHHHHC--------CHHHHTTSTTSSCB
T ss_pred             ------------hhHHHHHHHHHHHHHHHHHhhhhC-cEEEEEeeCCCCCchHHHHhhcCCCHHHHHHHHHhcCCCCCCc
Confidence                        3999996    7777777777654 9999999999999753210      0 01111111111111  


Q ss_pred             ----------CCCCCCCchhhhhhhhhccceeE
Q 025755          216 ----------FFTTPSHSYMLERTLVLNQGVRL  238 (248)
Q Consensus       216 ----------~l~~~~~~~~~g~~l~vd~g~~~  238 (248)
                                ||.++.+.|+|||+|.||||+++
T Consensus       214 ~pedia~~v~fL~S~~s~~itG~~i~vDGG~ta  246 (248)
T d2d1ya1         214 KPEEVAEAVLFLASEKASFITGAILPVDGGMTA  246 (248)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             CHHHHHHHHHHHhCchhcCCCCcEEEcCcCccc
Confidence                      78899999999999999999875

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=100.00  E-value=4.7e-36  Score=240.40  Aligned_cols=206  Identities=20%  Similarity=0.214  Sum_probs=159.3

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-------CCC
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-------GCT   79 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-------~id   79 (248)
                      ++||||||++|||++++++|+++|++|++.+++..+..+...+.+.....++.++++|++|.++++++++       ++|
T Consensus         2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   81 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTID   81 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCS
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence            5899999999999999999999999999987665444444444454456788999999999999888775       589


Q ss_pred             EEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHH----hcCCCEEEEEeccceeccCCCCCCCCccCCCCCCc
Q 025755           80 GVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCV----KAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSD  151 (248)
Q Consensus        80 ~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~----~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~  151 (248)
                      ++|||||.......    .+.|+..+++|+.++.++.+++.    +.+.++||++||..+..+.+....           
T Consensus        82 iLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~~~~-----------  150 (244)
T d1edoa_          82 VVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQAN-----------  150 (244)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHH-----------
T ss_pred             ccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhcCCCCCCHH-----------
Confidence            99999998765422    34567899999999877776664    447789999999988877765433           


Q ss_pred             hhhhccccchHHHHHH----HHHHHHHHHHHhCCccEEEEccCeeecCCCCCCCCccHHHHHHHHc----CC--------
Q 025755          152 EEFCKATENYYCLAKT----IAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLK----GF--------  215 (248)
Q Consensus       152 ~~~~~~~~~~Y~~sK~----~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~----~~--------  215 (248)
                                |+.||+    +++.++.+++++ |||||+|+||.+.+|+.....   ....+....    ++        
T Consensus       151 ----------Y~asKaal~~ltk~lA~el~~~-gIrvN~I~PG~i~T~~~~~~~---~~~~~~~~~~~pl~R~~~p~dvA  216 (244)
T d1edoa_         151 ----------YAAAKAGVIGFSKTAAREGASR-NINVNVVCPGFIASDMTAKLG---EDMEKKILGTIPLGRTGQPENVA  216 (244)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHHTT-TEEEEEEEECSBCSHHHHTTC---HHHHHHHHTSCTTCSCBCHHHHH
T ss_pred             ----------HHHHHHHHHHChHHHHHHHhhh-CcEEEEEecceeccHHHHHhh---HHHHHHHHhcCCCCCCcCHHHHH
Confidence                      999995    777777777765 599999999999998754321   222222221    11        


Q ss_pred             ----CCC-CCCCchhhhhhhhhcccee
Q 025755          216 ----FFT-TPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       216 ----~l~-~~~~~~~~g~~l~vd~g~~  237 (248)
                          ||. ++.+.|+||++|.||||.+
T Consensus       217 ~~v~fLa~S~~a~~itG~~i~vdGG~s  243 (244)
T d1edoa_         217 GLVEFLALSPAASYITGQAFTIDGGIA  243 (244)
T ss_dssp             HHHHHHHHCSGGGGCCSCEEEESTTTT
T ss_pred             HHHHHHHCCchhcCCcCCeEEeCCCee
Confidence                775 8899999999999999975

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5e-36  Score=240.88  Aligned_cols=208  Identities=16%  Similarity=0.179  Sum_probs=156.5

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC------
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA------   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~------   76 (248)
                      .|+||++|||||++|||+++++.|+++|++|++++|+.+.. +...++    .++..++.+|++|.++++++++      
T Consensus         3 rl~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~-~~~~~~----~~~~~~~~~Dvs~~~~v~~~~~~~~~~~   77 (250)
T d1ydea1           3 RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGG-RALEQE----LPGAVFILCDVTQEDDVKTLVSETIRRF   77 (250)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHH----CTTEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH-HHHHHh----cCCCeEEEccCCCHHHHHHHHHHHHHhc
Confidence            58999999999999999999999999999999999986322 222222    3568899999999999988875      


Q ss_pred             -CCCEEEEccccCCCCC-----CCCccccchhhhHHHHHHHHHHHHhc---CCCEEEEEeccceeccCCCCCCCCccCCC
Q 025755           77 -GCTGVFHVACPVPVGK-----VPNPEVQLIDPAVVGTKNVLNSCVKA---KVKRVVVVSSIGAVMLNPNWPKGQVMDEE  147 (248)
Q Consensus        77 -~id~vi~~ag~~~~~~-----~~~~~~~~~~~n~~g~~~~~~~~~~~---~~~~iV~vSS~~~~~~~~~~~~~~~~~e~  147 (248)
                       ++|++|||||......     ..+.|+..+++|+.++.++++++.+.   +.++||++||..+..+.+....       
T Consensus        78 g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~Ii~isS~~~~~~~~~~~~-------  150 (250)
T d1ydea1          78 GRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQAQAVP-------  150 (250)
T ss_dssp             SCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHCCTTCHH-------
T ss_pred             CCCCEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCCCCCcccccccccccccCcch-------
Confidence             5899999999754321     12446788999999998888877654   3379999999888777654333       


Q ss_pred             CCCchhhhccccchHHHHHH----HHHHHHHHHHHhCCccEEEEccCeeecCCCCCC---CCccHHHHHHHHc----CC-
Q 025755          148 CWSDEEFCKATENYYCLAKT----IAEIQALEYAKRGELDIVTVCPSIVIGPMLQPT---INTSSLLLLGFLK----GF-  215 (248)
Q Consensus       148 ~~~~~~~~~~~~~~Y~~sK~----~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~---~~~~~~~~~~~~~----~~-  215 (248)
                                    |+.||+    +++.++.++++++ ||||+|+||.+.+|+....   .......+++...    ++ 
T Consensus       151 --------------Y~asKaal~~lt~~lA~e~a~~g-IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~  215 (250)
T d1ydea1         151 --------------YVATKGAVTAMTKALALDESPYG-VRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLGRM  215 (250)
T ss_dssp             --------------HHHHHHHHHHHHHHHHHHHGGGT-CEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTTSSC
T ss_pred             --------------hHHHHhhHHHHHHHHHHHhcccC-eEEEEEeeCCCCChhHHHHhhcCCCHHHHHHHHHhcCCCCCC
Confidence                          999995    7777777777665 9999999999999864211   1111122222221    11 


Q ss_pred             -----------CCCCCCCchhhhhhhhhccceeE
Q 025755          216 -----------FFTTPSHSYMLERTLVLNQGVRL  238 (248)
Q Consensus       216 -----------~l~~~~~~~~~g~~l~vd~g~~~  238 (248)
                                 ||.++ +.|+||++|.||||+++
T Consensus       216 g~p~eva~~v~fL~Sd-a~~itG~~i~vDGG~~l  248 (250)
T d1ydea1         216 GQPAEVGAAAVFLASE-ANFCTGIELLVTGGAEL  248 (250)
T ss_dssp             BCHHHHHHHHHHHHHH-CTTCCSCEEEESTTTTS
T ss_pred             CCHHHHHHHHHHHhCc-cCCCcCCeEEECCCccc
Confidence                       67775 78999999999999864

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=100.00  E-value=4.5e-36  Score=241.79  Aligned_cols=210  Identities=15%  Similarity=0.126  Sum_probs=160.5

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC------
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA------   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~------   76 (248)
                      .|++|+++||||++|||+++++.|+++|++|++.+|+.+. .++..+++   ..+..++++|++|.++++++++      
T Consensus         3 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~-~~~~~~~~---~~~~~~~~~Dv~~~~~~~~~~~~~~~~~   78 (253)
T d1hxha_           3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAA-GQQLAAEL---GERSMFVRHDVSSEADWTLVMAAVQRRL   78 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHH-HHHHHHHH---CTTEEEECCCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHH-HHHHHHHh---CCCeEEEEeecCCHHHHHHHHHHHHHHh
Confidence            4899999999999999999999999999999999997642 23333333   4568889999999998888775      


Q ss_pred             -CCCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHHhc---CCCEEEEEeccceeccCCCCCCCCccCCCC
Q 025755           77 -GCTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCVKA---KVKRVVVVSSIGAVMLNPNWPKGQVMDEEC  148 (248)
Q Consensus        77 -~id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~~~---~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~  148 (248)
                       .+|++|||||.......    .++|+..+++|+.++..+++++.+.   +.++||++||..+..+.+...         
T Consensus        79 g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS~~~~~~~~~~~---------  149 (253)
T d1hxha_          79 GTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSSWLPIEQYA---------  149 (253)
T ss_dssp             CSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSCCTTBH---------
T ss_pred             CCCCeEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceecccchhhhcCccccc---------
Confidence             58999999998654432    2456789999999988887777653   348999999988776665433         


Q ss_pred             CCchhhhccccchHHHHHH----HHHHHHHHHHHh-CCccEEEEccCeeecCCCCCC--CCcc-----------------
Q 025755          149 WSDEEFCKATENYYCLAKT----IAEIQALEYAKR-GELDIVTVCPSIVIGPMLQPT--INTS-----------------  204 (248)
Q Consensus       149 ~~~~~~~~~~~~~Y~~sK~----~~e~l~~~~~~~-~~i~v~~vrpg~i~g~~~~~~--~~~~-----------------  204 (248)
                                  +|+.||+    +++.++.+++++ ++||||+|+||.+.+|+....  ....                 
T Consensus       150 ------------~Y~asKaal~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~gr~~  217 (253)
T d1hxha_         150 ------------GYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAY  217 (253)
T ss_dssp             ------------HHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCCHHHHBCBTTTBTTCCEE
T ss_pred             ------------cccchhHHHHHHHHHHHHHHhhcCCCEEEEEEeECCCcCHhHHhhCcchhhHHHHHhCccccccCCCC
Confidence                        3999995    777778888876 479999999999998753210  0011                 


Q ss_pred             -HHHHHHHHcCCCCCCCCCchhhhhhhhhccceeEE
Q 025755          205 -SLLLLGFLKGFFFTTPSHSYMLERTLVLNQGVRLY  239 (248)
Q Consensus       205 -~~~~~~~~~~~~l~~~~~~~~~g~~l~vd~g~~~~  239 (248)
                       +.-+..+..  ||.++.+.|+|||+|.||||+.++
T Consensus       218 ~pedvA~~v~--fL~S~~s~~itG~~i~VDGG~~~~  251 (253)
T d1hxha_         218 MPERIAQLVL--FLASDESSVMSGSELHADNSILGM  251 (253)
T ss_dssp             CHHHHHHHHH--HHHSGGGTTCCSCEEEESSSCTTT
T ss_pred             CHHHHHHHHH--HHhChhhCCCcCcEEEECccHhhC
Confidence             122222222  888999999999999999997643

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=5.8e-35  Score=246.86  Aligned_cols=229  Identities=17%  Similarity=0.100  Sum_probs=173.5

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhh----hhcCCCCCeEEEEccCCCHHHHHHHhCC--CCE
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLK----KLEGASENLQLFKTDLLDYEALCAATAG--CTG   80 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~----~~~~~~~~~~~~~~Di~d~~~~~~~~~~--id~   80 (248)
                      |+|||||||||||++++++|+++|++|++++|..........+    .......++.++++|++|.+++++++++  +|+
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~   81 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPDE   81 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCSE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhccCCCE
Confidence            7999999999999999999999999999999854321111111    1122346899999999999999999985  599


Q ss_pred             EEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCC---CEEEEEeccceeccCCCCCCCCccCCCCCCchhhhcc
Q 025755           81 VFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKV---KRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKA  157 (248)
Q Consensus        81 vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~---~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~  157 (248)
                      |+|+|+..........+..++++|+.|+.+++++|++.+.   .++||+||+. +|+.+.   ..+++|+++..|     
T Consensus        82 v~h~aa~~~~~~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS~~-vYG~~~---~~~~~E~~~~~P-----  152 (357)
T d1db3a_          82 VYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSE-LYGLVQ---EIPQKETTPFYP-----  152 (357)
T ss_dssp             EEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGG-GGTTCC---SSSBCTTSCCCC-----
T ss_pred             EEEeecccccchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEchh-hhCCCC---CCCcCCCCCCCC-----
Confidence            9999998776655666678999999999999999998754   4799999965 666543   567888887654     


Q ss_pred             ccchHHHHHHHHHHHHHHHHHhCCccEEEEccCeeecCCCCCCC--CccHHHHHHHHcCCC-CCCCCCchhhhhhhhhcc
Q 025755          158 TENYYCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTI--NTSSLLLLGFLKGFF-FTTPSHSYMLERTLVLNQ  234 (248)
Q Consensus       158 ~~~~Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~--~~~~~~~~~~~~~~~-l~~~~~~~~~g~~l~vd~  234 (248)
                       .++|+.||.++|.++..++++++++++++||+++|||......  ......+.....+.. ....+++....+.++|+|
T Consensus       153 -~~~Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~D  231 (357)
T d1db3a_         153 -RSPYAVAKLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKD  231 (357)
T ss_dssp             -CSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHH
T ss_pred             -CChHHHHHHHHHHHHHHHHHHhCCCEEEEEeccccCCCCCcCCCchHHHHHHHHHHhCCCceEEECCCCeeecceeech
Confidence             5669999999999999999988899999999999999765431  233344455555543 334456666778899999


Q ss_pred             ceeEEEeeccC
Q 025755          235 GVRLYRCKIQI  245 (248)
Q Consensus       235 g~~~~~~~~~~  245 (248)
                      -+.++..+++.
T Consensus       232 ~~~a~~~~~~~  242 (357)
T d1db3a_         232 YVKMQWMMLQQ  242 (357)
T ss_dssp             HHHHHHHTTSS
T ss_pred             HHHHHHHHHhC
Confidence            88877666653

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=100.00  E-value=2.1e-35  Score=238.32  Aligned_cols=209  Identities=22%  Similarity=0.292  Sum_probs=158.1

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-------CC
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-------GC   78 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-------~i   78 (248)
                      +|++|||||++|||+++++.|+++|++|++++|+.+ ..+...+++.....++.++++|++|+++++++++       ++
T Consensus         1 KKValITGas~GIG~aia~~la~~Ga~V~~~~r~~~-~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   79 (255)
T d1gega_           1 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDA-TAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGF   79 (255)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHH-HHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCC
T ss_pred             CCEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHH-HHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCc
Confidence            367899999999999999999999999999999874 3334445555556789999999999999888865       58


Q ss_pred             CEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHHh----c-CCCEEEEEeccceeccCCCCCCCCccCCCCC
Q 025755           79 TGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCVK----A-KVKRVVVVSSIGAVMLNPNWPKGQVMDEECW  149 (248)
Q Consensus        79 d~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~~----~-~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~  149 (248)
                      |++|||||.......    .++|+..+++|+.++.++++++.+    . +.++||++||..+..+.+...          
T Consensus        80 DilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~~----------  149 (255)
T d1gega_          80 DVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELA----------  149 (255)
T ss_dssp             CEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBH----------
T ss_pred             cEEEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhcccCcccc----------
Confidence            999999998654422    345678999999999888887654    2 357899999988776665433          


Q ss_pred             CchhhhccccchHHHHHH----HHHHHHHHHHHhCCccEEEEccCeeecCCCCCCC--------CccHHHHHHHH----c
Q 025755          150 SDEEFCKATENYYCLAKT----IAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTI--------NTSSLLLLGFL----K  213 (248)
Q Consensus       150 ~~~~~~~~~~~~Y~~sK~----~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~--------~~~~~~~~~~~----~  213 (248)
                                 +|+.||+    +++.++.++++++ ||||+|+||.+.+|+.....        .........+.    -
T Consensus       150 -----------~Y~asKaal~~ltk~lA~el~~~g-IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl  217 (255)
T d1gega_         150 -----------VYSSSKFAVRGLTQTAARDLAPLG-ITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITL  217 (255)
T ss_dssp             -----------HHHHHHHHHHHHHHHHHHHHGGGT-EEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTT
T ss_pred             -----------cchhCHHHHHhhHHHHHHHhhhhC-cEEEEEecCcccChHHhhhhhhhHhhhcccchhHHHHHHhcCCC
Confidence                       3999995    7777777777765 99999999999987632110        00011111111    1


Q ss_pred             CC------------CCCCCCCchhhhhhhhhcccee
Q 025755          214 GF------------FFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       214 ~~------------~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                      ++            ||.++.+.|+||++|.||||+.
T Consensus       218 ~R~~~peevA~~v~fL~S~~a~~itG~~i~vDGG~~  253 (255)
T d1gega_         218 GRLSEPEDVAACVSYLASPDSDYMTGQSLLIDGGMV  253 (255)
T ss_dssp             CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSSS
T ss_pred             CCCcCHHHHHHHHHHHhCchhCCccCcEEEecCCEE
Confidence            11            7889999999999999999974

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=6.5e-35  Score=235.75  Aligned_cols=213  Identities=14%  Similarity=0.100  Sum_probs=154.9

Q ss_pred             CCCCcEEEEEcCcc--HHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC----
Q 025755            3 GEDKERVCVTGAGG--YIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA----   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g--~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~----   76 (248)
                      +|++|++|||||+|  |||++++++|+++|++|++.+|+..  .....++......+..++++|++|+++++++++    
T Consensus         5 ~L~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   82 (256)
T d1ulua_           5 DLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAER--LRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKE   82 (256)
T ss_dssp             CCTTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGG--GHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHH--HHHHHHHhhhccCcccccccccCCHHHHHHHHHHHHH
Confidence            48999999999987  8999999999999999999988753  222223333334567889999999999888865    


Q ss_pred             ---CCCEEEEccccCCCC--------CCCCccccchhhhHHHHHHHHHHHHhc--CCCEEEEEeccceeccCCCCCCCCc
Q 025755           77 ---GCTGVFHVACPVPVG--------KVPNPEVQLIDPAVVGTKNVLNSCVKA--KVKRVVVVSSIGAVMLNPNWPKGQV  143 (248)
Q Consensus        77 ---~id~vi~~ag~~~~~--------~~~~~~~~~~~~n~~g~~~~~~~~~~~--~~~~iV~vSS~~~~~~~~~~~~~~~  143 (248)
                         ++|++|||||..+..        ...++|...+++|+.++..+++++.+.  +.++||++||..+..+.+...    
T Consensus        83 ~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~Iv~isS~~~~~~~~~~~----  158 (256)
T d1ulua_          83 AFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVVPKYN----  158 (256)
T ss_dssp             HHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBCTTCH----
T ss_pred             hcCCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccCCEEEEEeehHhcCCCCCch----
Confidence               589999999975421        112234567899999999999998765  347999999988777665433    


Q ss_pred             cCCCCCCchhhhccccchHHHHHH----HHHHHHHHHHHhCCccEEEEccCeeecCCCCCCCC---ccHHHHHHHHcCC-
Q 025755          144 MDEECWSDEEFCKATENYYCLAKT----IAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTIN---TSSLLLLGFLKGF-  215 (248)
Q Consensus       144 ~~e~~~~~~~~~~~~~~~Y~~sK~----~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~---~~~~~~~~~~~~~-  215 (248)
                                       +|+.||+    +++.++.+++++ |||||+|+||.+.+++......   ..........-++ 
T Consensus       159 -----------------~Y~asKaal~~ltr~lA~ela~~-gIrVN~I~PG~i~t~~~~~~~~~~~~~~~~~~~~pl~R~  220 (256)
T d1ulua_         159 -----------------VMAIAKAALEASVRYLAYELGPK-GVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLRRN  220 (256)
T ss_dssp             -----------------HHHHHHHHHHHHHHHHHHHHGGG-TCEEEEEEECCC----------CHHHHHHHHHHSTTSSC
T ss_pred             -----------------HHHHHHHHHHHHHHHHHHHhccc-CCEEeeeccceeeeccccchhhhHHHHHHHHhcCCCCCC
Confidence                             3999995    677777777765 4999999999999987654321   1111222222222 


Q ss_pred             -----------CCCCCCCchhhhhhhhhccceeEE
Q 025755          216 -----------FFTTPSHSYMLERTLVLNQGVRLY  239 (248)
Q Consensus       216 -----------~l~~~~~~~~~g~~l~vd~g~~~~  239 (248)
                                 ||.++.+.|+||++|.||||+++.
T Consensus       221 ~~pedvA~~v~fL~S~~s~~itG~~i~VDGG~~~~  255 (256)
T d1ulua_         221 ITQEEVGNLGLFLLSPLASGITGEVVYVDAGYHIM  255 (256)
T ss_dssp             CCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGB
T ss_pred             cCHHHHHHHHHHHhCchhCCccCCeEEECcCEeCc
Confidence                       888999999999999999999864

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=100.00  E-value=7.7e-35  Score=235.70  Aligned_cols=217  Identities=16%  Similarity=0.162  Sum_probs=157.6

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhh-cCCCCCeEEEEccCCCHHHHHHHhC-----
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKL-EGASENLQLFKTDLLDYEALCAATA-----   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~Di~d~~~~~~~~~-----   76 (248)
                      +|++|++|||||++|||+++++.|+++|++|++++|+..+..+. .+++ .....++.++++|++|+++++++++     
T Consensus         6 ~l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~-~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~   84 (260)
T d1h5qa_           6 SFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEV-TEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDAD   84 (260)
T ss_dssp             CCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHH-HHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH-HHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            58999999999999999999999999999999999988644332 2222 2235678999999999999888875     


Q ss_pred             --CCCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHHh-----cCCCEEEEEeccceeccCCCCCCCCccC
Q 025755           77 --GCTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCVK-----AKVKRVVVVSSIGAVMLNPNWPKGQVMD  145 (248)
Q Consensus        77 --~id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~~-----~~~~~iV~vSS~~~~~~~~~~~~~~~~~  145 (248)
                        ++|++|||||.......    .++|+..+++|+.++.++.+++.+     ...++|+.+||............     
T Consensus        85 ~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~~~~~-----  159 (260)
T d1h5qa_          85 LGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLN-----  159 (260)
T ss_dssp             SCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEETT-----
T ss_pred             hCCCcEecccccccccCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeeccccccccccccc-----
Confidence              58999999998654422    345678899999998887776543     24567777777543322110000     


Q ss_pred             CCCCCchhhhccccchHHHHHH----HHHHHHHHHHHhCCccEEEEccCeeecCCCCCCCCccHHHHHHHH----cCC--
Q 025755          146 EECWSDEEFCKATENYYCLAKT----IAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTINTSSLLLLGFL----KGF--  215 (248)
Q Consensus       146 e~~~~~~~~~~~~~~~Y~~sK~----~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~----~~~--  215 (248)
                       ..        .....|+.||+    +++.++.++++++ ||||+|+||.+.+|+.....   ....+...    -++  
T Consensus       160 -~~--------~~~~~Y~asKaal~~lt~~lA~el~~~g-IrvN~I~PG~i~T~~~~~~~---~~~~~~~~~~~pl~R~g  226 (260)
T d1h5qa_         160 -GS--------LTQVFYNSSKAACSNLVKGLAAEWASAG-IRVNALSPGYVNTDQTAHMD---KKIRDHQASNIPLNRFA  226 (260)
T ss_dssp             -EE--------CSCHHHHHHHHHHHHHHHHHHHHHGGGT-EEEEEEEECSBCCGGGGGSC---HHHHHHHHHTCTTSSCB
T ss_pred             -cC--------ccccchhhhhhhHHHHHHHHHHHhchhC-eEEeecCCCcccCcchhccC---HHHHHHHHhcCCCCCCc
Confidence             00        01234999995    7777777777765 99999999999998765332   22222222    122  


Q ss_pred             ----------CCCCCCCchhhhhhhhhccceeE
Q 025755          216 ----------FFTTPSHSYMLERTLVLNQGVRL  238 (248)
Q Consensus       216 ----------~l~~~~~~~~~g~~l~vd~g~~~  238 (248)
                                ||.++.+.|+||++|.||||+.+
T Consensus       227 ~pedvA~~v~fL~S~~s~~itG~~i~VDGG~~~  259 (260)
T d1h5qa_         227 QPEEMTGQAILLLSDHATYMTGGEYFIDGGQLI  259 (260)
T ss_dssp             CGGGGHHHHHHHHSGGGTTCCSCEEEECTTGGG
T ss_pred             CHHHHHHHHHHHhcchhCCCcCceEEECCCeec
Confidence                      88899999999999999999864

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.5e-35  Score=239.62  Aligned_cols=219  Identities=16%  Similarity=0.136  Sum_probs=159.3

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhc-----CCCCCeEEEEccCCCHHHHHHHhC--
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLE-----GASENLQLFKTDLLDYEALCAATA--   76 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~~~Di~d~~~~~~~~~--   76 (248)
                      |+||++|||||++|||+++++.|+++|++|++++|+.++.. ...+++.     ....++..+.+|++|+++++++++  
T Consensus        10 L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~-~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~   88 (297)
T d1yxma1          10 LQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLK-SAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKST   88 (297)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHHH
Confidence            89999999999999999999999999999999999874322 2222222     234678999999999999888775  


Q ss_pred             -----CCCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHHh----cCCCEEEEEeccceeccCCCCCCCCc
Q 025755           77 -----GCTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCVK----AKVKRVVVVSSIGAVMLNPNWPKGQV  143 (248)
Q Consensus        77 -----~id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~~----~~~~~iV~vSS~~~~~~~~~~~~~~~  143 (248)
                           ++|++|||||.......    .+.|+..+++|+.++..+.+++.+    .+.++||++||.. ..+.+..     
T Consensus        89 ~~~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~ss~~-~~~~~~~-----  162 (297)
T d1yxma1          89 LDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPT-KAGFPLA-----  162 (297)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCC-TTCCTTC-----
T ss_pred             HHHhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhccccccccccccccc-ccccccc-----
Confidence                 58999999997654422    345677899999999888777654    3567899887643 3333322     


Q ss_pred             cCCCCCCchhhhccccchHHHHHH----HHHHHHHHHHHhCCccEEEEccCeeecCCCCCCCCc-cHHHHHHH----HcC
Q 025755          144 MDEECWSDEEFCKATENYYCLAKT----IAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTINT-SSLLLLGF----LKG  214 (248)
Q Consensus       144 ~~e~~~~~~~~~~~~~~~Y~~sK~----~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~~-~~~~~~~~----~~~  214 (248)
                                      .+|+.||+    +++.++.+++++ |||||+|+||.+.+|+....... ...+.+..    .-+
T Consensus       163 ----------------~~Y~asKaal~~ltk~lA~el~~~-gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~plg  225 (297)
T d1yxma1         163 ----------------VHSGAARAGVYNLTKSLALEWACS-GIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAK  225 (297)
T ss_dssp             ----------------HHHHHHHHHHHHHHHHHHHHTGGG-TEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGSTTS
T ss_pred             ----------------ccchhHHHHHHHHHHHHHHHhccc-CceEEEeeeCcCcCcchhhhccccCHHHHHHHHhcCCCC
Confidence                            33999996    666666666655 49999999999999875322111 01111111    111


Q ss_pred             C------------CCCCCCCchhhhhhhhhccceeEEEeeccCC
Q 025755          215 F------------FFTTPSHSYMLERTLVLNQGVRLYRCKIQIP  246 (248)
Q Consensus       215 ~------------~l~~~~~~~~~g~~l~vd~g~~~~~~~~~~p  246 (248)
                      +            ||.++.+.|+||++|.||||++++.-....|
T Consensus       226 R~g~pedvA~~v~fL~Sd~s~~iTG~~i~VDGG~sl~~~~~~~~  269 (297)
T d1yxma1         226 RIGVPEEVSSVVCFLLSPAASFITGQSVDVDGGRSLYTHSYEVP  269 (297)
T ss_dssp             SCBCTHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCBTTCCCC
T ss_pred             CCcCHHHHHHHHHHHhCchhcCcCCcEEEeCcChhhhcCCCCCC
Confidence            1            8889999999999999999998775554433

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=7.5e-35  Score=237.18  Aligned_cols=215  Identities=15%  Similarity=0.160  Sum_probs=155.2

Q ss_pred             CCCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcC---CCCCeEEEEccCCCHHHHHHHhC--
Q 025755            2 SGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEG---ASENLQLFKTDLLDYEALCAATA--   76 (248)
Q Consensus         2 ~~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~~Di~d~~~~~~~~~--   76 (248)
                      |.|++|++|||||++|||++++++|+++|++|++++|+.++ .+...+.+..   ...++.++++|++|+++++++++  
T Consensus         1 prL~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~-l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~   79 (272)
T d1xkqa_           1 PRFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSER-LEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINST   79 (272)
T ss_dssp             CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHH-HHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHH-HHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHH
Confidence            56899999999999999999999999999999999998743 2333333332   23568999999999999888775  


Q ss_pred             -----CCCEEEEccccCCCCCCC--------CccccchhhhHHHHHHHHHHHHhc---CCCEEEEEec-cceeccCCCCC
Q 025755           77 -----GCTGVFHVACPVPVGKVP--------NPEVQLIDPAVVGTKNVLNSCVKA---KVKRVVVVSS-IGAVMLNPNWP  139 (248)
Q Consensus        77 -----~id~vi~~ag~~~~~~~~--------~~~~~~~~~n~~g~~~~~~~~~~~---~~~~iV~vSS-~~~~~~~~~~~  139 (248)
                           ++|++|||||........        +.|...+++|+.++..+.+++.+.   +.+++|+++| .++..+.+...
T Consensus        80 ~~~~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~Ss~a~~~~~~~~~  159 (272)
T d1xkqa_          80 LKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQPDFL  159 (272)
T ss_dssp             HHHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSSCCCSSH
T ss_pred             HHHhCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccCCccccccchhccccCCCCcc
Confidence                 589999999987543221        135678899999998888877654   3356666655 44455554433


Q ss_pred             CCCccCCCCCCchhhhccccchHHHHHH----HHHHHHHHHHHhCCccEEEEccCeeecCCCCCCCC--ccH----HHHH
Q 025755          140 KGQVMDEECWSDEEFCKATENYYCLAKT----IAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTIN--TSS----LLLL  209 (248)
Q Consensus       140 ~~~~~~e~~~~~~~~~~~~~~~Y~~sK~----~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~--~~~----~~~~  209 (248)
                                           +|+.||+    +++.++.+++++ |||||+|+||.+.+|+......  ...    ....
T Consensus       160 ---------------------~Y~asKaal~~ltk~lA~el~~~-gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~  217 (272)
T d1xkqa_         160 ---------------------YYAIAKAALDQYTRSTAIDLAKF-GIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMA  217 (272)
T ss_dssp             ---------------------HHHHHHHHHHHHHHHHHHHHHTT-TCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHH
T ss_pred             ---------------------hhhhHHHHHHHHHHHHHHHhccc-CeEEEEEeeCCCcchhhhccCCchHHHHHHHHHHH
Confidence                                 3999995    777777777765 4999999999999986432210  000    1111


Q ss_pred             HHHc----CC------------CCCCCC-CchhhhhhhhhccceeEE
Q 025755          210 GFLK----GF------------FFTTPS-HSYMLERTLVLNQGVRLY  239 (248)
Q Consensus       210 ~~~~----~~------------~l~~~~-~~~~~g~~l~vd~g~~~~  239 (248)
                      ....    ++            ||.++. +.|+|||+|.||||++++
T Consensus       218 ~~~~~~PlgR~g~pediA~~v~fL~S~~as~~iTG~~i~vDGG~~l~  264 (272)
T d1xkqa_         218 SHKECIPIGAAGKPEHIANIILFLADRNLSFYILGQSIVADGGTSLV  264 (272)
T ss_dssp             HCTTTCTTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGC
T ss_pred             HHhcCCCCCCCcCHHHHHHHHHHHhCcchhCCccCeEEEeCcCHHHh
Confidence            1111    11            677765 479999999999999876

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=3.3e-34  Score=232.46  Aligned_cols=213  Identities=15%  Similarity=0.184  Sum_probs=150.3

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcC---CCCCeEEEEccCCCHHHHHHHhC---
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEG---ASENLQLFKTDLLDYEALCAATA---   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~~Di~d~~~~~~~~~---   76 (248)
                      .|++|++|||||++|||++++++|+++|++|++++|+.+. .+...+++..   ...++.++.+|++|.++++++++   
T Consensus         2 rl~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~-l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~   80 (264)
T d1spxa_           2 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAER-LEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTL   80 (264)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHH-HHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHH-HHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHH
Confidence            4899999999999999999999999999999999998643 2233333322   23568999999999999888775   


Q ss_pred             ----CCCEEEEccccCCCCC--------CCCccccchhhhHHHHHHHHHHHHhc---CCCEEEEEeccc-eeccCCCCCC
Q 025755           77 ----GCTGVFHVACPVPVGK--------VPNPEVQLIDPAVVGTKNVLNSCVKA---KVKRVVVVSSIG-AVMLNPNWPK  140 (248)
Q Consensus        77 ----~id~vi~~ag~~~~~~--------~~~~~~~~~~~n~~g~~~~~~~~~~~---~~~~iV~vSS~~-~~~~~~~~~~  140 (248)
                          ++|++|||||......        ..+.|+..+++|+.++.++.+++.+.   +.+++|+++|.. +..+.+... 
T Consensus        81 ~~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~S~~~~~~~~~~~~-  159 (264)
T d1spxa_          81 GKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGLHATPDFP-  159 (264)
T ss_dssp             HHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTTSSSSCCTTSH-
T ss_pred             HHhCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCccccccCcceeeeeeccccccCCCch-
Confidence                5899999999754321        12346778999999998888777654   335677766654 445554433 


Q ss_pred             CCccCCCCCCchhhhccccchHHHHHH----HHHHHHHHHHHhCCccEEEEccCeeecCCCCCCC------CccHHHH--
Q 025755          141 GQVMDEECWSDEEFCKATENYYCLAKT----IAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTI------NTSSLLL--  208 (248)
Q Consensus       141 ~~~~~e~~~~~~~~~~~~~~~Y~~sK~----~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~------~~~~~~~--  208 (248)
                                          +|+.||+    +++.++.++++++ ||||+|+||.+.+|+.....      .......  
T Consensus       160 --------------------~Y~asKaal~~lt~~lA~el~~~g-IrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~  218 (264)
T d1spxa_         160 --------------------YYSIAKAAIDQYTRNTAIDLIQHG-IRVNSISPGLVATGFGSAMGMPEETSKKFYSTMAT  218 (264)
T ss_dssp             --------------------HHHHHHHHHHHHHHHHHHHHGGGT-CEEEEEEECCBCCCC--------------HHHHHH
T ss_pred             --------------------hhhhhhhhHHHHHHHHHHHhcccC-eEEEEEeeCCCCCcchhccCCcHHHHHHHHHHHHH
Confidence                                3999995    7777788887765 99999999999998754321      0111111  


Q ss_pred             --HHHHcCC------------CCCCCC-CchhhhhhhhhccceeE
Q 025755          209 --LGFLKGF------------FFTTPS-HSYMLERTLVLNQGVRL  238 (248)
Q Consensus       209 --~~~~~~~------------~l~~~~-~~~~~g~~l~vd~g~~~  238 (248)
                        .....++            ||.++. +.|+||+.|.||||+++
T Consensus       219 ~~~~~Pl~R~g~pedvA~~v~fL~S~~~s~~itG~~i~vDGG~sl  263 (264)
T d1spxa_         219 MKECVPAGVMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGGSSL  263 (264)
T ss_dssp             HHHHCTTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGG
T ss_pred             HHhcCCCCCCcCHHHHHHHHHHHhCCcccCCccCceEEeCCChhh
Confidence              1111122            777744 78999999999999875

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=2.2e-34  Score=234.54  Aligned_cols=215  Identities=16%  Similarity=0.159  Sum_probs=157.4

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcC---CCCCeEEEEccCCCHHHHHHHhC---
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEG---ASENLQLFKTDLLDYEALCAATA---   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~~Di~d~~~~~~~~~---   76 (248)
                      .|+||+++||||++|||++++++|+++|++|++++|+.++ .+...+++..   ...++.++.+|++|+++++++++   
T Consensus         1 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~-l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   79 (274)
T d1xhla_           1 RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDR-LEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTL   79 (274)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHH-HHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHH-HHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHH
Confidence            3799999999999999999999999999999999998643 2333333322   23468999999999999888775   


Q ss_pred             ----CCCEEEEccccCCCCCC------CCccccchhhhHHHHHHHHHHHHh----cCCCEEEEEeccceeccCCCCCCCC
Q 025755           77 ----GCTGVFHVACPVPVGKV------PNPEVQLIDPAVVGTKNVLNSCVK----AKVKRVVVVSSIGAVMLNPNWPKGQ  142 (248)
Q Consensus        77 ----~id~vi~~ag~~~~~~~------~~~~~~~~~~n~~g~~~~~~~~~~----~~~~~iV~vSS~~~~~~~~~~~~~~  142 (248)
                          ++|++|||||.......      .+.|+..+++|+.++..+.+++.+    .+.++|+++||..+..+.+...   
T Consensus        80 ~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~~~~~~~~~---  156 (274)
T d1xhla_          80 AKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSGYP---  156 (274)
T ss_dssp             HHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSCCTTSH---
T ss_pred             HHcCCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccccccccchhhhhccccCCCCc---
Confidence                58999999997543211      234677899999998877777654    4667888888876665554433   


Q ss_pred             ccCCCCCCchhhhccccchHHHHHH----HHHHHHHHHHHhCCccEEEEccCeeecCCCCCCC--CccH----HHHHHHH
Q 025755          143 VMDEECWSDEEFCKATENYYCLAKT----IAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTI--NTSS----LLLLGFL  212 (248)
Q Consensus       143 ~~~e~~~~~~~~~~~~~~~Y~~sK~----~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~--~~~~----~~~~~~~  212 (248)
                                        +|+.||+    +++.++.++++++ ||||+|+||.+.+|+.....  ....    .++....
T Consensus       157 ------------------~Y~asKaal~~ltk~lA~ela~~g-IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~  217 (274)
T d1xhla_         157 ------------------YYACAKAALDQYTRCTAIDLIQHG-VRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRK  217 (274)
T ss_dssp             ------------------HHHHHHHHHHHHHHHHHHHHGGGT-CEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCT
T ss_pred             ------------------eehhhhhHHHHHHHHHHHHHhHhC-CceeeeccCCCcCchhhhhcccchhhHHHHHHHHHHH
Confidence                              3999995    7777778887765 99999999999998643210  0001    1111111


Q ss_pred             ----cCC------------CCCCC-CCchhhhhhhhhccceeEEE
Q 025755          213 ----KGF------------FFTTP-SHSYMLERTLVLNQGVRLYR  240 (248)
Q Consensus       213 ----~~~------------~l~~~-~~~~~~g~~l~vd~g~~~~~  240 (248)
                          -++            ||.++ .+.|+||++|.||||++++.
T Consensus       218 ~~iPlgR~g~pediA~~v~fL~S~d~s~~itG~~i~vDGG~~l~~  262 (274)
T d1xhla_         218 ECIPVGHCGKPEEIANIIVFLADRNLSSYIIGQSIVADGGSTLVM  262 (274)
T ss_dssp             TTCTTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGCC
T ss_pred             cCCCCCCCcCHHHHHHHHHHHcCCccccCccCcEEEeCcCHHHhc
Confidence                111            77775 57899999999999998763

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=100.00  E-value=5.8e-34  Score=230.44  Aligned_cols=212  Identities=16%  Similarity=0.108  Sum_probs=159.3

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC------
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA------   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~------   76 (248)
                      .|+||++|||||++|||++++++|+++|++|++.+++..+..+...+.+...+.++.++.+|++|.++++++++      
T Consensus         3 ~L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~   82 (259)
T d1ja9a_           3 PLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHF   82 (259)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHHc
Confidence            48999999999999999999999999999999988776554555556666667789999999999999888775      


Q ss_pred             -CCCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHHhc--CCCEEEEEeccceec-cCCCCCCCCccCCCC
Q 025755           77 -GCTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCVKA--KVKRVVVVSSIGAVM-LNPNWPKGQVMDEEC  148 (248)
Q Consensus        77 -~id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~~~--~~~~iV~vSS~~~~~-~~~~~~~~~~~~e~~  148 (248)
                       .+|++|||||.......    .+.|+..+++|+.+..++++++.+.  +.+++++++|..+.. +.+.+          
T Consensus        83 g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~s~~~~~~~~~~~----------  152 (259)
T d1ja9a_          83 GGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMTGIPNH----------  152 (259)
T ss_dssp             SCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCCSCCSC----------
T ss_pred             CCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCcccccccccccccCCCCc----------
Confidence             58999999998655422    3445778999999999998888775  345777777655433 34332          


Q ss_pred             CCchhhhccccchHHHHHH----HHHHHHHHHHHhCCccEEEEccCeeecCCCCC---------CCCccH-HHHHHHHc-
Q 025755          149 WSDEEFCKATENYYCLAKT----IAEIQALEYAKRGELDIVTVCPSIVIGPMLQP---------TINTSS-LLLLGFLK-  213 (248)
Q Consensus       149 ~~~~~~~~~~~~~Y~~sK~----~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~---------~~~~~~-~~~~~~~~-  213 (248)
                                 ..|+.||+    +++.++++++++ |||||+|+||++.+|+...         ...... .+.+.+.. 
T Consensus       153 -----------~~Y~asK~al~~l~r~lA~e~~~~-gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (259)
T d1ja9a_         153 -----------ALYAGSKAAVEGFCRAFAVDCGAK-GVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANM  220 (259)
T ss_dssp             -----------HHHHHHHHHHHHHHHHHHHHHGGG-TCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHT
T ss_pred             -----------hhHHHHHHHHHHHHHHHHHHHhhc-CeEEeccCcCCccChhhhhhhhhhhhhhcccCCHHHHHHHHHhC
Confidence                       23999995    677777777765 4999999999999874211         111111 22222111 


Q ss_pred             ---CC------------CCCCCCCchhhhhhhhhccce
Q 025755          214 ---GF------------FFTTPSHSYMLERTLVLNQGV  236 (248)
Q Consensus       214 ---~~------------~l~~~~~~~~~g~~l~vd~g~  236 (248)
                         ++            ||.++.+.|+||+.|.||||+
T Consensus       221 ~pl~R~g~p~eVa~~v~fL~S~~a~~itG~~i~vDGG~  258 (259)
T d1ja9a_         221 NPLKRIGYPADIGRAVSALCQEESEWINGQVIKLTGGG  258 (259)
T ss_dssp             STTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             CCCCCCcCHHHHHHHHHHHhCchhcCCcCceEEeCCCC
Confidence               11            788889999999999999997

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.5e-35  Score=242.71  Aligned_cols=226  Identities=18%  Similarity=0.239  Sum_probs=173.4

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEEcc
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFHVA   85 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~~a   85 (248)
                      .|+||||||+|+||++++++|+++|++|+++++........ .... ....++++...|+.     +.++.++|+|||+|
T Consensus         1 kKKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~-~~~~-~~~~~~d~~~~~~~-----~~~~~~~d~VihlA   73 (312)
T d2b69a1           1 RKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRN-VEHW-IGHENFELINHDVV-----EPLYIEVDQIYHLA   73 (312)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGG-TGGG-TTCTTEEEEECCTT-----SCCCCCCSEEEECC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHH-HHHh-cCCCceEEEehHHH-----HHHHcCCCEEEECc
Confidence            48999999999999999999999999999998744322211 1111 12345666666654     34566899999999


Q ss_pred             ccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccccchHHHH
Q 025755           86 CPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLA  165 (248)
Q Consensus        86 g~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~s  165 (248)
                      +..........+.+.+++|+.|+.++++++++.+. ++||+||.+ +|+.+.   ..+++|+.... ..+..|.++|+.|
T Consensus        74 a~~~~~~~~~~~~~~~~~Nv~g~~~ll~~~~~~~~-k~I~~SS~~-vy~~~~---~~~~~e~~~~~-~~~~~p~~~Y~~s  147 (312)
T d2b69a1          74 SPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA-RLLLASTSE-VYGDPE---VHPQSEDYWGH-VNPIGPRACYDEG  147 (312)
T ss_dssp             SCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTC-EEEEEEEGG-GGBSCS---SSSBCTTCCCB-CCSSSTTHHHHHH
T ss_pred             ccCCchhHHhCHHHHHHHHHHHHHHHHHHHHHcCC-cEEEEEChh-eecCCC---CCCCCccccCC-CCCCCCccHHHHH
Confidence            97664433455578899999999999999999886 899999965 565543   55666665422 2233456779999


Q ss_pred             HHHHHHHHHHHHHhCCccEEEEccCeeecCCCCCC-CCccHHHHHHHHcCCCCCCCCCchhhhhhhhhccceeEEEeecc
Q 025755          166 KTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPT-INTSSLLLLGFLKGFFFTTPSHSYMLERTLVLNQGVRLYRCKIQ  244 (248)
Q Consensus       166 K~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~g~~l~vd~g~~~~~~~~~  244 (248)
                      |.++|.++..++++++++++++||+++|||++... ...++.++.++..|+.+..++++....+.+|++|...++..+++
T Consensus       148 K~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~i~~~i~~~~~g~~i~i~~~g~~~r~~i~v~D~~~~~~~~~~  227 (312)
T d2b69a1         148 KRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMN  227 (312)
T ss_dssp             HHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHhCCcEEEEEeeeEECCCCCCCCccHHHHHHHHHHcCCCeEEeCCCCeeEccEEHHHHHHHHHHHHh
Confidence            99999999999998899999999999999987654 34567888999999887777777777788999999887766655

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=6.8e-34  Score=226.59  Aligned_cols=202  Identities=17%  Similarity=0.141  Sum_probs=150.7

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCH-HHHHHHhCCCCEEE
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDY-EALCAATAGCTGVF   82 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~-~~~~~~~~~id~vi   82 (248)
                      |++|++|||||++|||++++++|+++|++|++++|+.+.     +++     ....++.+|+++. +.+.+-+.++|++|
T Consensus         2 LkgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~-----l~~-----~~~~~~~~Dv~~~~~~~~~~~g~iD~lV   71 (234)
T d1o5ia_           2 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEEL-----LKR-----SGHRYVVCDLRKDLDLLFEKVKEVDILV   71 (234)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHH-----HHH-----TCSEEEECCTTTCHHHHHHHSCCCSEEE
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHH-----HHh-----cCCcEEEcchHHHHHHHHHHhCCCcEEE
Confidence            789999999999999999999999999999999998531     121     2345788999863 44555566899999


Q ss_pred             EccccCCCCC----CCCccccchhhhHHHHHHHHHHHH----hcCCCEEEEEeccceeccCCCCCCCCccCCCCCCchhh
Q 025755           83 HVACPVPVGK----VPNPEVQLIDPAVVGTKNVLNSCV----KAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEF  154 (248)
Q Consensus        83 ~~ag~~~~~~----~~~~~~~~~~~n~~g~~~~~~~~~----~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~  154 (248)
                      ||||......    ..++|+..+++|+.++..+.+++.    +.+.++||++||.....+.+..                
T Consensus        72 nnAG~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~~~~~~~~----------------  135 (234)
T d1o5ia_          72 LNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIENL----------------  135 (234)
T ss_dssp             ECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTB----------------
T ss_pred             ecccccCCcchhhhhhHHHHHHhhhhhhhhhhhhhccccccccccccccccccccccccccccc----------------
Confidence            9999755432    134467789999999877776664    4467899999997766555432                


Q ss_pred             hccccchHHHHHH----HHHHHHHHHHHhCCccEEEEccCeeecCCCCCCCCccHHHHHHHHc----CC-----------
Q 025755          155 CKATENYYCLAKT----IAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLK----GF-----------  215 (248)
Q Consensus       155 ~~~~~~~Y~~sK~----~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~----~~-----------  215 (248)
                           ..|+.||+    +++.++.++++++ ||||+|+||.+.+++.....  .....+.+..    ++           
T Consensus       136 -----~~Y~asKaal~~ltk~lA~ela~~g-IrVN~I~PG~v~T~~~~~~~--~~~~~~~~~~~~pl~R~~~pediA~~v  207 (234)
T d1o5ia_         136 -----YTSNSARMALTGFLKTLSFEVAPYG-ITVNCVAPGWTETERVKELL--SEEKKKQVESQIPMRRMAKPEEIASVV  207 (234)
T ss_dssp             -----HHHHHHHHHHHHHHHHHHHHHGGGT-EEEEEEEECSBCCTTHHHHS--CHHHHHHHHTTSTTSSCBCHHHHHHHH
T ss_pred             -----ccchhHHHHHHHHHHHHHHHhcccC-eEEeecccCccchhhhhhhc--CHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence                 33999995    6777788887765 99999999999998753211  1111111111    11           


Q ss_pred             -CCCCCCCchhhhhhhhhccceeEE
Q 025755          216 -FFTTPSHSYMLERTLVLNQGVRLY  239 (248)
Q Consensus       216 -~l~~~~~~~~~g~~l~vd~g~~~~  239 (248)
                       ||.++.+.|+|||+|.||||++.+
T Consensus       208 ~fL~S~~s~~itG~~i~vDGG~s~~  232 (234)
T d1o5ia_         208 AFLCSEKASYLTGQTIVVDGGLSKF  232 (234)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTCCCC
T ss_pred             HHHhChhhcCCcCcEEEECcccccC
Confidence             888999999999999999998753

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=100.00  E-value=6.2e-34  Score=232.12  Aligned_cols=210  Identities=18%  Similarity=0.123  Sum_probs=155.7

Q ss_pred             CCCCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC----
Q 025755            1 MSGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA----   76 (248)
Q Consensus         1 m~~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~----   76 (248)
                      |. |+||++|||||++|||+++++.|+++|++|++++|+.++. .+..+++   ..++..+.+|++|.++++++++    
T Consensus         1 M~-L~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l-~~~~~~~---~~~~~~~~~Dv~~~~~~~~~~~~~~~   75 (276)
T d1bdba_           1 MK-LKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERL-AELETDH---GDNVLGIVGDVRSLEDQKQAASRCVA   75 (276)
T ss_dssp             CT-TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHHH---GGGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CC-CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH-HHHHHHc---CCCeeEEecccccHHHHHHHHHHHHH
Confidence            44 9999999999999999999999999999999999986432 2222222   3578999999999999888765    


Q ss_pred             ---CCCEEEEccccCCCCCC-----CC----ccccchhhhHHHHHHHHHHHHhc---CCCEEEEEeccceeccCCCCCCC
Q 025755           77 ---GCTGVFHVACPVPVGKV-----PN----PEVQLIDPAVVGTKNVLNSCVKA---KVKRVVVVSSIGAVMLNPNWPKG  141 (248)
Q Consensus        77 ---~id~vi~~ag~~~~~~~-----~~----~~~~~~~~n~~g~~~~~~~~~~~---~~~~iV~vSS~~~~~~~~~~~~~  141 (248)
                         .+|++|||||.......     .+    .|+..+++|+.++..+++++.+.   +.++||++||..+..+.+.... 
T Consensus        76 ~~g~idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~g~iI~i~S~~~~~~~~~~~~-  154 (276)
T d1bdba_          76 RFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASRGNVIFTISNAGFYPNGGGPL-  154 (276)
T ss_dssp             HHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTSTTSSCHH-
T ss_pred             HhCCcccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcCCCceeeeechhccCCCCCch-
Confidence               58999999997653321     11    26678999999988877776543   2379999999887776654333 


Q ss_pred             CccCCCCCCchhhhccccchHHHHHH----HHHHHHHHHHHhCCccEEEEccCeeecCCCCCCCC-------ccHHHHHH
Q 025755          142 QVMDEECWSDEEFCKATENYYCLAKT----IAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTIN-------TSSLLLLG  210 (248)
Q Consensus       142 ~~~~e~~~~~~~~~~~~~~~Y~~sK~----~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~-------~~~~~~~~  210 (248)
                                          |+.||+    +++.++.++++ + ||||+|+||.+.+++..+...       ....+.+.
T Consensus       155 --------------------Y~asKaal~~ltr~lA~ela~-~-IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~  212 (276)
T d1bdba_         155 --------------------YTAAKHAIVGLVRELAFELAP-Y-VRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADM  212 (276)
T ss_dssp             --------------------HHHHHHHHHHHHHHHHHHHTT-T-CEEEEEEECCCCSCCCCCGGGC---------CHHHH
T ss_pred             --------------------HHHHHHHHHHHHHHHHHHhhc-c-eEEcccCCCCEecCcCCccchhhhhhccCcHHHHHH
Confidence                                999995    77777888874 5 999999999999987543210       00111112


Q ss_pred             HHc----CC------------CCCCC-CCchhhhhhhhhccceeE
Q 025755          211 FLK----GF------------FFTTP-SHSYMLERTLVLNQGVRL  238 (248)
Q Consensus       211 ~~~----~~------------~l~~~-~~~~~~g~~l~vd~g~~~  238 (248)
                      +..    ++            ||.++ .+.|+||++|.||||+++
T Consensus       213 ~~~~~PlgR~g~peeva~~v~fL~S~~~a~~itG~~i~VDGG~~~  257 (276)
T d1bdba_         213 LKSVLPIGRMPEVEEYTGAYVFFATRGDAAPATGALLNYDGGLGV  257 (276)
T ss_dssp             HTTTCTTSSCCCGGGGSHHHHHHHCHHHHTTCSSCEEEESSSGGG
T ss_pred             HHhcCCCCCCcCHHHHHHHHHHHcCCcccCCeeCcEEEECcChhh
Confidence            111    11            66664 578999999999999875

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=100.00  E-value=4e-34  Score=228.77  Aligned_cols=209  Identities=17%  Similarity=0.141  Sum_probs=154.3

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC------
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA------   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~------   76 (248)
                      .|++|+++||||++|||+++++.|+++|++|++++|+.++ ..+..+   +..+++.++++|++|+++++++++      
T Consensus         2 ~l~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~-~~~~~~---~~~~~~~~~~~Dls~~~~i~~~~~~i~~~~   77 (241)
T d2a4ka1           2 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERL-LAEAVA---ALEAEAIAVVADVSDPKAVEAVFAEALEEF   77 (241)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHH-HHHHHH---TCCSSEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHH-HHHHHH---HcCCceEEEEecCCCHHHHHHHHHHHHHHh
Confidence            3799999999999999999999999999999999998743 222223   335678999999999999988775      


Q ss_pred             -CCCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHHhc--CCCEEEEEeccceeccCCCCCCCCccCCCCC
Q 025755           77 -GCTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCVKA--KVKRVVVVSSIGAVMLNPNWPKGQVMDEECW  149 (248)
Q Consensus        77 -~id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~~~--~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~  149 (248)
                       ++|++|||||.......    .++|.+.+++|+.++..+.+++.+.  +.+.++++||.+ ..+.+.            
T Consensus        78 g~iDiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~a-~~~~~~------------  144 (241)
T d2a4ka1          78 GRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVA-GLGAFG------------  144 (241)
T ss_dssp             SCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCT-TCCHHH------------
T ss_pred             CCccEeccccccccccchhhhhccccccccccccccccccccccccccccccceeeccccc-cccccC------------
Confidence             58999999997654432    3456788999999999999998776  345666665543 222222            


Q ss_pred             CchhhhccccchHHHHHH----HHHHHHHHHHHhCCccEEEEccCeeecCCCCCCCC-ccHHHHHHHHcCC---------
Q 025755          150 SDEEFCKATENYYCLAKT----IAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTIN-TSSLLLLGFLKGF---------  215 (248)
Q Consensus       150 ~~~~~~~~~~~~Y~~sK~----~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~-~~~~~~~~~~~~~---------  215 (248)
                               ...|+.+|+    +++.++.+++++ |||||+|+||.+.+++...... ....+..+...++         
T Consensus       145 ---------~~~Y~~sK~al~~lt~~lA~el~~~-gIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~  214 (241)
T d2a4ka1         145 ---------LAHYAAGKLGVVGLARTLALELARK-GVRVNVLLPGLIQTPMTAGLPPWAWEQEVGASPLGRAGRPEEVAQ  214 (241)
T ss_dssp             ---------HHHHHHCSSHHHHHHHHHHHHHTTT-TCEEEEEEECSBCCGGGTTSCHHHHHHHHHTSTTCSCBCHHHHHH
T ss_pred             ---------ccccchhhHHHHHHHHHHHHHHhHh-CCEEeeeccCcCCCHHHHhhhHhHHHHHHhCCCCCCCcCHHHHHH
Confidence                     234999995    555566666655 4999999999999987653211 1111222222222         


Q ss_pred             ---CCCCCCCchhhhhhhhhccceeE
Q 025755          216 ---FFTTPSHSYMLERTLVLNQGVRL  238 (248)
Q Consensus       216 ---~l~~~~~~~~~g~~l~vd~g~~~  238 (248)
                         ||.++.+.|+||++|.||||+++
T Consensus       215 ~v~fL~S~~s~~itG~~i~vDGG~s~  240 (241)
T d2a4ka1         215 AALFLLSEESAYITGQALYVDGGRSI  240 (241)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTTTT
T ss_pred             HHHHHhcchhCCCcCceEEeCCCccc
Confidence               88899999999999999999875

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=100.00  E-value=5.8e-34  Score=241.02  Aligned_cols=232  Identities=17%  Similarity=0.143  Sum_probs=174.6

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCCCeEEE-EEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC--CCCEEEE
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKGYMVHG-TVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA--GCTGVFH   83 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~--~id~vi~   83 (248)
                      |+||||||+||||+++++.|++.|++|++ +++............+ ....++.++++|++|.+.+.++++  ++|+|||
T Consensus         1 MkILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~Vih   79 (361)
T d1kewa_           1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDI-SESNRYNFEHADICDSAEITRIFEQYQPDAVMH   79 (361)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTT-TTCTTEEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccHHHHHhh-hhcCCcEEEEccCCCHHHHHHHHHhCCCCEEEE
Confidence            47999999999999999999999998655 4433222222222222 224689999999999999999887  5899999


Q ss_pred             ccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcC---------CCEEEEEeccceeccCCCCCCCCccCCCC---C-C
Q 025755           84 VACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAK---------VKRVVVVSSIGAVMLNPNWPKGQVMDEEC---W-S  150 (248)
Q Consensus        84 ~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~---------~~~iV~vSS~~~~~~~~~~~~~~~~~e~~---~-~  150 (248)
                      +|+..........+..++++|+.|+.+++++|++.+         .+++|++||.. +|+...   ..+..|+.   + .
T Consensus        80 lAa~~~~~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~-vyg~~~---~~~~~~~~~~~~~~  155 (361)
T d1kewa_          80 LAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDE-VYGDLP---HPDEVENSVTLPLF  155 (361)
T ss_dssp             CCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGG-GGCCCC---CGGGSCTTSCCCCB
T ss_pred             CccccchhhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccce-eeCCCc---cCCccccccCCCCc
Confidence            999755433333447789999999999999998753         35999999966 454322   22222221   1 1


Q ss_pred             chhhhccccchHHHHHHHHHHHHHHHHHhCCccEEEEccCeeecCCCCCCCCccHHHHHHHHcCCCCCCCCCchhhhhhh
Q 025755          151 DEEFCKATENYYCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKGFFFTTPSHSYMLERTL  230 (248)
Q Consensus       151 ~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~l  230 (248)
                      .++....|.+.||.||.++|.++..+.++++++++++||+++|||.+... ...+.++.++..|+.+.+.+++....+.+
T Consensus       156 ~e~~~~~p~s~Yg~sK~~~E~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~-~~i~~~i~~~~~g~~~~v~g~g~~~r~~i  234 (361)
T d1kewa_         156 TETTAYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPE-KLIPLVILNALEGKPLPIYGKGDQIRDWL  234 (361)
T ss_dssp             CTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTT-SHHHHHHHHHHHTCCEEEETTSCCEEEEE
T ss_pred             ccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEecCceECcCCCcC-cHHHHHHHHHHcCCCcEEeCCCCeEEeCE
Confidence            23344456778999999999999999998899999999999999987653 46688899999998776666666667789


Q ss_pred             hhccceeEEEeecc
Q 025755          231 VLNQGVRLYRCKIQ  244 (248)
Q Consensus       231 ~vd~g~~~~~~~~~  244 (248)
                      ||+|.+.++..+++
T Consensus       235 ~v~D~a~ai~~~~~  248 (361)
T d1kewa_         235 YVEDHARALHMVVT  248 (361)
T ss_dssp             EHHHHHHHHHHHHH
T ss_pred             EHHHHHHHHHHHHh
Confidence            99999888776665

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.7e-33  Score=225.71  Aligned_cols=210  Identities=19%  Similarity=0.203  Sum_probs=155.8

Q ss_pred             CCCCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC---C
Q 025755            1 MSGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA---G   77 (248)
Q Consensus         1 m~~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~---~   77 (248)
                      |-.|++|++|||||++|||+++++.|+++|++|++.+|+.++.     ++... ...+....+|+.+.+.++...+   +
T Consensus         1 m~~l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l-----~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~~~   74 (245)
T d2ag5a1           1 MGRLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKL-----QELEK-YPGIQTRVLDVTKKKQIDQFANEVER   74 (245)
T ss_dssp             CCTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHH-----GGGGG-STTEEEEECCTTCHHHHHHHHHHCSC
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHH-----HHHHh-ccCCceeeeecccccccccccccccc
Confidence            6679999999999999999999999999999999999986321     22222 3568888999998877666554   7


Q ss_pred             CCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHHh----cCCCEEEEEecccee-ccCCCCCCCCccCCCC
Q 025755           78 CTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCVK----AKVKRVVVVSSIGAV-MLNPNWPKGQVMDEEC  148 (248)
Q Consensus        78 id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~~----~~~~~iV~vSS~~~~-~~~~~~~~~~~~~e~~  148 (248)
                      +|++|||||.......    .+.|...+++|+.++..+.+++.+    .+.++||++||..+. .+.+.           
T Consensus        75 id~lVn~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~~-----------  143 (245)
T d2ag5a1          75 LDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVN-----------  143 (245)
T ss_dssp             CSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCTT-----------
T ss_pred             ceeEEecccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeechhhccCCccc-----------
Confidence            8999999998765422    345678899999999888777754    366899999986542 33322           


Q ss_pred             CCchhhhccccchHHHHHH----HHHHHHHHHHHhCCccEEEEccCeeecCCCCCC---CCccHHHHHHHH----cCC--
Q 025755          149 WSDEEFCKATENYYCLAKT----IAEIQALEYAKRGELDIVTVCPSIVIGPMLQPT---INTSSLLLLGFL----KGF--  215 (248)
Q Consensus       149 ~~~~~~~~~~~~~Y~~sK~----~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~---~~~~~~~~~~~~----~~~--  215 (248)
                                ..+|+.+|+    +++.++.++++++ ||||+|+||.+.+|+....   ..........+.    -++  
T Consensus       144 ----------~~~Y~~sKaal~~l~r~lA~e~~~~g-IrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~  212 (245)
T d2ag5a1         144 ----------RCVYSTTKAAVIGLTKSVAADFIQQG-IRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFA  212 (245)
T ss_dssp             ----------BHHHHHHHHHHHHHHHHHHHHHGGGT-EEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTTSSCE
T ss_pred             ----------hhHHHHHHHHHHHHHHHHHHHhhhhC-cEEEEEeeceeechhhHhhhhhhhhhHHHHHHHHhcCCCCCCc
Confidence                      234999996    6666777777664 9999999999999864321   011111222111    111  


Q ss_pred             ----------CCCCCCCchhhhhhhhhccceeE
Q 025755          216 ----------FFTTPSHSYMLERTLVLNQGVRL  238 (248)
Q Consensus       216 ----------~l~~~~~~~~~g~~l~vd~g~~~  238 (248)
                                ||.++.+.|+||++|.||||+++
T Consensus       213 ~pedva~~v~fL~s~~s~~iTG~~i~VDGG~sl  245 (245)
T d2ag5a1         213 TAEEIAMLCVYLASDESAYVTGNPVIIDGGWSL  245 (245)
T ss_dssp             EHHHHHHHHHHHHSGGGTTCCSCEEEECTTGGG
T ss_pred             CHHHHHHHHHHHhChhhCCCcCceEEeCCCcCC
Confidence                      88899999999999999999863

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.98  E-value=1e-32  Score=222.32  Aligned_cols=207  Identities=14%  Similarity=0.057  Sum_probs=151.4

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcC--CCCCeEEEEccCCCHHHHHHHhC------
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEG--ASENLQLFKTDLLDYEALCAATA------   76 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~Di~d~~~~~~~~~------   76 (248)
                      +||++|||||++|||+++++.|+++|++|++++|+.++. .+..+.+..  ...++.++++|++|.++++++++      
T Consensus         2 ~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~-~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (254)
T d2gdza1           2 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAG-VQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF   80 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH-HHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHc
Confidence            689999999999999999999999999999999987433 233333333  24578999999999999888875      


Q ss_pred             -CCCEEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHh----cC---CCEEEEEeccceeccCCCCCCCCccCCCC
Q 025755           77 -GCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVK----AK---VKRVVVVSSIGAVMLNPNWPKGQVMDEEC  148 (248)
Q Consensus        77 -~id~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~----~~---~~~iV~vSS~~~~~~~~~~~~~~~~~e~~  148 (248)
                       ++|++|||||....    .+|++.+++|+.++.++.+++.+    .+   .++||++||..+..+.+....        
T Consensus        81 G~iDilVnnAg~~~~----~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~~~~~~~~--------  148 (254)
T d2gdza1          81 GRLDILVNNAGVNNE----KNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPV--------  148 (254)
T ss_dssp             SCCCEEEECCCCCCS----SSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTCHH--------
T ss_pred             CCcCeeccccccccc----ccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhccCCCCccc--------
Confidence             58999999998654    56788999999987766666543    32   378999999988777765433        


Q ss_pred             CCchhhhccccchHHHHHHHHHHH------HHHHHHhCCccEEEEccCeeecCCCCCCC---------CccHHHHHHHHc
Q 025755          149 WSDEEFCKATENYYCLAKTIAEIQ------ALEYAKRGELDIVTVCPSIVIGPMLQPTI---------NTSSLLLLGFLK  213 (248)
Q Consensus       149 ~~~~~~~~~~~~~Y~~sK~~~e~l------~~~~~~~~~i~v~~vrpg~i~g~~~~~~~---------~~~~~~~~~~~~  213 (248)
                                   |+.||+..+.+      +.+++++ |||||+|+||.+.+|+.....         .....+......
T Consensus       149 -------------Y~asKaal~~ltrs~ala~e~~~~-gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~  214 (254)
T d2gdza1         149 -------------YCASKHGIVGFTRSAALAANLMNS-GVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKY  214 (254)
T ss_dssp             -------------HHHHHHHHHHHHHHHHHHHHHHTC-CEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHHHH
T ss_pred             -------------hHHHHHHHHHHHHHHHHHHHhcCC-CEEEEEEEcCCCCChhhhhccccccccccHHHHHHHHhcCCC
Confidence                         99999744444      4466654 599999999999988643211         011111111111


Q ss_pred             CC------------CCCCCCCchhhhhhhhhccceeEEE
Q 025755          214 GF------------FFTTPSHSYMLERTLVLNQGVRLYR  240 (248)
Q Consensus       214 ~~------------~l~~~~~~~~~g~~l~vd~g~~~~~  240 (248)
                      ++            ||.++  .++||++|.||||..+..
T Consensus       215 ~r~~~pedvA~~v~fL~s~--~~itG~~i~VdGG~~~~~  251 (254)
T d2gdza1         215 YGILDPPLIANGLITLIED--DALNGAIMKITTSKGIHF  251 (254)
T ss_dssp             HCCBCHHHHHHHHHHHHHC--TTCSSCEEEEETTTEEEE
T ss_pred             CCCcCHHHHHHHHHHHHcC--CCCCCCEEEECCCCeeec
Confidence            11            56554  469999999999987643

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=99.98  E-value=8.6e-33  Score=227.56  Aligned_cols=214  Identities=14%  Similarity=0.096  Sum_probs=153.1

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhc-CCCCCeEEEEccCCCHHHHHHHhC-----
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLE-GASENLQLFKTDLLDYEALCAATA-----   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~Di~d~~~~~~~~~-----   76 (248)
                      +|+||++|||||++|||+++++.|+++|++|++++|+..+.. ...+++. ....++.++.+|++|.++++++++     
T Consensus        22 ~l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~-~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~  100 (294)
T d1w6ua_          22 SFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLK-ATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKV  100 (294)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHH-HHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhhh
Confidence            589999999999999999999999999999999999874332 2233332 235678899999999999887764     


Q ss_pred             --CCCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHH-----hcCCCEEEEEeccceeccCCCCCCCCccC
Q 025755           77 --GCTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCV-----KAKVKRVVVVSSIGAVMLNPNWPKGQVMD  145 (248)
Q Consensus        77 --~id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~-----~~~~~~iV~vSS~~~~~~~~~~~~~~~~~  145 (248)
                        ++|++|||||.......    ...++..+.+|..+...+...+.     ....+.++++||..+..+.+..       
T Consensus       101 ~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~~~~~~-------  173 (294)
T d1w6ua_         101 AGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFV-------  173 (294)
T ss_dssp             TCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTTC-------
T ss_pred             ccccchhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhhccccc-------
Confidence              58999999997665422    23346677888888776655543     2245678888887666555443       


Q ss_pred             CCCCCchhhhccccchHHHHHH----HHHHHHHHHHHhCCccEEEEccCeeecCCCCCCCCccHHHHHHHHc----CC--
Q 025755          146 EECWSDEEFCKATENYYCLAKT----IAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLK----GF--  215 (248)
Q Consensus       146 e~~~~~~~~~~~~~~~Y~~sK~----~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~----~~--  215 (248)
                                    .+|+.||+    +++.++.+++++ |||||+|+||.+.+++.................    ++  
T Consensus       174 --------------~~YsasKaal~~ltk~lA~ela~~-gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~pl~R~~  238 (294)
T d1w6ua_         174 --------------VPSASAKAGVEAMSKSLAAEWGKY-GMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCGRLG  238 (294)
T ss_dssp             --------------HHHHHHHHHHHHHHHHHHHHHGGG-TEEEEEEEECCBCC------CCTTSHHHHHHHTTCTTSSCB
T ss_pred             --------------chHHHHHHHHHHHHHHHHHHHhHh-CeEEEEEccCccccchhhhccCCcHHHHHHHhhcCCCCCCC
Confidence                          23999996    666667777765 499999999999998754332222222222222    22  


Q ss_pred             ----------CCCCCCCchhhhhhhhhccceeEE
Q 025755          216 ----------FFTTPSHSYMLERTLVLNQGVRLY  239 (248)
Q Consensus       216 ----------~l~~~~~~~~~g~~l~vd~g~~~~  239 (248)
                                ||.++.+.|+||++|.||||.+++
T Consensus       239 ~pediA~~v~fL~sd~s~~itG~~i~vDGG~~l~  272 (294)
T d1w6ua_         239 TVEELANLAAFLCSDYASWINGAVIKFDGGEEVL  272 (294)
T ss_dssp             CHHHHHHHHHHHTSGGGTTCCSCEEEESTTHHHH
T ss_pred             CHHHHHHHHHHHhCchhcCCCCcEEEECCChhhe
Confidence                      788888999999999999997643

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=99.98  E-value=1.3e-32  Score=229.04  Aligned_cols=228  Identities=21%  Similarity=0.221  Sum_probs=180.5

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCCCeEEE------EEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCE
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKGYMVHG------TVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTG   80 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g~~V~~------~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~   80 (248)
                      |+||||||+|+||+++++.|+++|++|..      ++.............. ....++.++.+|+.+...........|.
T Consensus         1 MkIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~~~~d~   79 (322)
T d1r6da_           1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPV-DADPRLRFVHGDIRDAGLLARELRGVDA   79 (322)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGG-TTCTTEEEEECCTTCHHHHHHHTTTCCE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHhHhhhh-hcCCCeEEEEeccccchhhhccccccce
Confidence            47999999999999999999999986543      3332211122222222 2356899999999999999999999999


Q ss_pred             EEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccccc
Q 025755           81 VFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATEN  160 (248)
Q Consensus        81 vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~  160 (248)
                      |+|+|+............+.+++|+.|+.++++++.+.+.+++||+||.. +|+...   ..+++|+++..|      .+
T Consensus        80 vi~~a~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~I~~Ss~~-~yg~~~---~~~~~E~~~~~p------~~  149 (322)
T d1r6da_          80 IVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQ-VYGSID---SGSWTESSPLEP------NS  149 (322)
T ss_dssp             EEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGG-GGCCCS---SSCBCTTSCCCC------CS
T ss_pred             EEeecccccccccccchHHHhhhhHHHHHHHHHHHHHcCCceEEEeecce-eecCCC---CCCCCCCCCCCC------CC
Confidence            99999876543333444678899999999999999999999999999966 555433   566788877665      45


Q ss_pred             hHHHHHHHHHHHHHHHHHhCCccEEEEccCeeecCCCCCCCCccHHHHHHHHcCCCCCCCCCchhhhhhhhhccceeEEE
Q 025755          161 YYCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKGFFFTTPSHSYMLERTLVLNQGVRLYR  240 (248)
Q Consensus       161 ~Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~l~vd~g~~~~~  240 (248)
                      .|+.+|.++|.++..+.++++++++++||+++|||.+... ...+.++.++..++.+...+++....+.+||+|.+.++.
T Consensus       150 ~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~-~~i~~~i~~~~~~~~i~v~~~g~~~r~~i~v~D~a~ai~  228 (322)
T d1r6da_         150 PYAASKAGSDLVARAYHRTYGLDVRITRCCNNYGPYQHPE-KLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIA  228 (322)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCTT-SHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCCEEEEEeeeEECcCCCcC-cHHHHHHHHHHcCCCcEEecCCCeEEccEEHHHHHHHHH
Confidence            6999999999999999998889999999999999987653 467788899999887776667767778899999988887


Q ss_pred             eeccCC
Q 025755          241 CKIQIP  246 (248)
Q Consensus       241 ~~~~~p  246 (248)
                      .+++.+
T Consensus       229 ~~~~~~  234 (322)
T d1r6da_         229 LVLAGG  234 (322)
T ss_dssp             HHHHHC
T ss_pred             HHHhCC
Confidence            776543

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.98  E-value=6.2e-33  Score=232.75  Aligned_cols=231  Identities=17%  Similarity=0.124  Sum_probs=184.2

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCch--hhHHhhhhc--CCCCCeEEEEccCCCHHHHHHHhCCCC
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDE--KNAHLKKLE--GASENLQLFKTDLLDYEALCAATAGCT   79 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~--~~~~~~~~~--~~~~~~~~~~~Di~d~~~~~~~~~~id   79 (248)
                      .+.|+||||||||+||++++++|+++|++|++++|.....  .........  ....++.++.+|+.|...+.......+
T Consensus        14 ~~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~~   93 (341)
T d1sb8a_          14 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGVD   93 (341)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTCS
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeecccccccccccccccc
Confidence            3568999999999999999999999999999998743211  111111111  123578999999999999999999999


Q ss_pred             EEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhcccc
Q 025755           80 GVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATE  159 (248)
Q Consensus        80 ~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~  159 (248)
                      .++|+++.........++...+++|+.|+.+++++|.+.+.+++||+||.. +|+...   ..+++|+++.+|      .
T Consensus        94 ~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~i~~SS~~-vyg~~~---~~~~~E~~~~~p------~  163 (341)
T d1sb8a_          94 YVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSS-TYGDHP---GLPKVEDTIGKP------L  163 (341)
T ss_dssp             EEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGG-GGTTCC---CSSBCTTCCCCC------C
T ss_pred             ccccccccccccccccCccchhheeehhHHHHHHHHHhcCCceEEEcccce-eeCCCC---CCCccCCCCCCC------C
Confidence            999999876543334455778999999999999999999999999999976 555432   567888888765      4


Q ss_pred             chHHHHHHHHHHHHHHHHHhCCccEEEEccCeeecCCCCCCC---CccHHHHHHHHcCCCCCCCCCchhhhhhhhhccce
Q 025755          160 NYYCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTI---NTSSLLLLGFLKGFFFTTPSHSYMLERTLVLNQGV  236 (248)
Q Consensus       160 ~~Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~---~~~~~~~~~~~~~~~l~~~~~~~~~g~~l~vd~g~  236 (248)
                      +.|+.+|.++|.++..++++++++++++||+++|||...+..   .....++.++..|+.+...+++....+.+||++.+
T Consensus       164 ~~Y~~sK~~~E~~~~~~~~~~~i~~~ilR~~~v~G~~~~~~~~~~~~i~~~~~~~~~g~~i~~~g~g~~~r~~i~v~D~~  243 (341)
T d1sb8a_         164 SPYAVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTV  243 (341)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHH
T ss_pred             CcchHHHHHHHHHHHHHHHHhCCCeEEEEeceeeccCcCCCCchhhhHHHHHHHHHcCCceEEcCCCCEEEEEEEEeccc
Confidence            559999999999999999988999999999999999876542   35567888899898777776777777889999988


Q ss_pred             eEEEeecc
Q 025755          237 RLYRCKIQ  244 (248)
Q Consensus       237 ~~~~~~~~  244 (248)
                      .++..++.
T Consensus       244 ~a~~~~~~  251 (341)
T d1sb8a_         244 QANLLAAT  251 (341)
T ss_dssp             HHHHHHHT
T ss_pred             hhhhhhhh
Confidence            77665554

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.98  E-value=2.2e-32  Score=222.60  Aligned_cols=213  Identities=16%  Similarity=0.145  Sum_probs=160.1

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC------
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA------   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~------   76 (248)
                      +|+||++|||||++|||+++++.|+++|++|++++|+..+..+...+.+.....++.++++|++|+++++++++      
T Consensus        15 sL~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~   94 (272)
T d1g0oa_          15 SLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIF   94 (272)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHHHh
Confidence            48999999999999999999999999999999999887555555555566667789999999999999888875      


Q ss_pred             -CCCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHHhc--CCCEEEEEeccceecc-CCCCCCCCccCCCC
Q 025755           77 -GCTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCVKA--KVKRVVVVSSIGAVML-NPNWPKGQVMDEEC  148 (248)
Q Consensus        77 -~id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~~~--~~~~iV~vSS~~~~~~-~~~~~~~~~~~e~~  148 (248)
                       ++|++|||+|.......    .+.|...+++|+.++..+++++.+.  ..+++++++|..+... .+.           
T Consensus        95 g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s~~~~~~~~~~-----------  163 (272)
T d1g0oa_          95 GKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKAVPK-----------  163 (272)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSSCSS-----------
T ss_pred             CCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeeccccccccccccccccccccccccccccc-----------
Confidence             58999999997654422    3445678999999999999998775  4478999988654332 221           


Q ss_pred             CCchhhhccccchHHHHHH----HHHHHHHHHHHhCCccEEEEccCeeecCCCCC--------CCCccHHHHHH------
Q 025755          149 WSDEEFCKATENYYCLAKT----IAEIQALEYAKRGELDIVTVCPSIVIGPMLQP--------TINTSSLLLLG------  210 (248)
Q Consensus       149 ~~~~~~~~~~~~~Y~~sK~----~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~--------~~~~~~~~~~~------  210 (248)
                                ...|+.+|+    +++.++.+++++ |||||+|+||.+.+|+...        ..........+      
T Consensus       164 ----------~~~Y~asKaal~~ltk~lA~e~~~~-gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (272)
T d1g0oa_         164 ----------HAVYSGSKGAIETFARCMAIDMADK-KITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQW  232 (272)
T ss_dssp             ----------CHHHHHHHHHHHHHHHHHHHHHGGG-TCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHS
T ss_pred             ----------hhhHHHHHHHHHHHHHHHHHHhchh-CeEEEEEccCCcCChHHHHHHHhhhhcccccchHHHHHHHHHcc
Confidence                      233999995    667777777765 4999999999999875211        00111111111      


Q ss_pred             HHcCC------------CCCCCCCchhhhhhhhhcccee
Q 025755          211 FLKGF------------FFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       211 ~~~~~------------~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                      ..-++            ||.++.+.|+||++|.||||..
T Consensus       233 ~PlgR~~~peevA~~v~fL~s~~s~~itG~~i~vDGG~~  271 (272)
T d1g0oa_         233 SPLRRVGLPIDIARVVCFLASNDGGWVTGKVIGIDGGAC  271 (272)
T ss_dssp             CTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTCC
T ss_pred             CCCCCCcCHHHHHHHHHHHhCchhcCccCceEeECCCCC
Confidence            11121            7888899999999999999963

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=99.97  E-value=5e-32  Score=218.06  Aligned_cols=168  Identities=13%  Similarity=0.035  Sum_probs=133.3

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCC-CHHHHHHHhC-----
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLL-DYEALCAATA-----   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~-d~~~~~~~~~-----   76 (248)
                      +|++|+||||||++|||++++++|+++|++|++++|+.++..............++.++.+|++ +.++++++++     
T Consensus         2 ~l~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~   81 (254)
T d1sbya1           2 DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQ   81 (254)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHH
Confidence            4999999999999999999999999999999999988754322211112233457889999998 6666766654     


Q ss_pred             --CCCEEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhc-------CCCEEEEEeccceeccCCCCCCCCccCCC
Q 025755           77 --GCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKA-------KVKRVVVVSSIGAVMLNPNWPKGQVMDEE  147 (248)
Q Consensus        77 --~id~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~-------~~~~iV~vSS~~~~~~~~~~~~~~~~~e~  147 (248)
                        ++|++|||||...    .+.|+.++++|+.|+.++.+++.+.       ..++||++||..+..+.+.+..       
T Consensus        82 ~g~iDilvnnAG~~~----~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~~~~~~~-------  150 (254)
T d1sbya1          82 LKTVDILINGAGILD----DHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPV-------  150 (254)
T ss_dssp             HSCCCEEEECCCCCC----TTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTSHH-------
T ss_pred             cCCCCEEEeCCCCCC----HHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhccCCCCCHH-------
Confidence              6899999999754    4677889999999998888877542       2478999999988877665433       


Q ss_pred             CCCchhhhccccchHHHHHH----HHHHHHHHHHHhCCccEEEEccCeeecCC
Q 025755          148 CWSDEEFCKATENYYCLAKT----IAEIQALEYAKRGELDIVTVCPSIVIGPM  196 (248)
Q Consensus       148 ~~~~~~~~~~~~~~Y~~sK~----~~e~l~~~~~~~~~i~v~~vrpg~i~g~~  196 (248)
                                    |+.||+    +++.++.++.+.+ ||||+|+||.+.+|+
T Consensus       151 --------------Y~asKaal~~~t~~la~el~~~g-IrVn~I~PG~v~T~~  188 (254)
T d1sbya1         151 --------------YSASKAAVVSFTNSLAKLAPITG-VTAYSINPGITRTPL  188 (254)
T ss_dssp             --------------HHHHHHHHHHHHHHHHHHHHHHS-EEEEEEEECSEESHH
T ss_pred             --------------HHHHHHHHHHHHHHHHhhccccC-eEEEEEEeCCCcCcc
Confidence                          999995    7777777777665 999999999999985

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.97  E-value=4.7e-33  Score=224.09  Aligned_cols=203  Identities=11%  Similarity=0.050  Sum_probs=149.2

Q ss_pred             EEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-------CCCE
Q 025755            8 RVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-------GCTG   80 (248)
Q Consensus         8 ~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-------~id~   80 (248)
                      ++|||||++|||++++++|+++|++|++.+|+.+...  .++....     .+..+|++|.++++++++       ++|+
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~--~~~~~~~-----~~~~~dv~~~~~~~~~~~~~~~~~G~iDi   74 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKD--ELEAFAE-----TYPQLKPMSEQEPAELIEAVTSAYGQVDV   74 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHH--HHHHHHH-----HCTTSEECCCCSHHHHHHHHHHHHSCCCE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH--HHHhhhC-----cEEEeccCCHHHHHHHHHHHHHHcCCCCE
Confidence            7899999999999999999999999999999865322  2222111     133578888777666654       6899


Q ss_pred             EEEccccCCCCC-----CCCccccchhhhHHHHHHHHHHHH----hcCCCEEEEEeccceeccCCCCCCCCccCCCCCCc
Q 025755           81 VFHVACPVPVGK-----VPNPEVQLIDPAVVGTKNVLNSCV----KAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSD  151 (248)
Q Consensus        81 vi~~ag~~~~~~-----~~~~~~~~~~~n~~g~~~~~~~~~----~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~  151 (248)
                      +|||||......     ..++|+..+++|+.++.++++++.    +.+.++||++||..+..+.+...            
T Consensus        75 LVnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~~~~~~~~------------  142 (252)
T d1zmta1          75 LVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKELS------------  142 (252)
T ss_dssp             EEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCTTCH------------
T ss_pred             EEECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeeccccccccccccccc------------
Confidence            999999754321     124467788999999877777654    44678999999988776665433            


Q ss_pred             hhhhccccchHHHHHH----HHHHHHHHHHHhCCccEEEEccCeeecCCCCCCCC-----ccHHHHHHH----HcCC---
Q 025755          152 EEFCKATENYYCLAKT----IAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTIN-----TSSLLLLGF----LKGF---  215 (248)
Q Consensus       152 ~~~~~~~~~~Y~~sK~----~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~-----~~~~~~~~~----~~~~---  215 (248)
                               .|+.||+    +++.++.++++++ ||||+|+||.+.+++......     ..+.....+    .-++   
T Consensus       143 ---------~Y~asKaal~~lt~~lA~ela~~g-IrVN~I~PG~i~T~~~~~~~~~~~~~~~~e~~~~~~~~~pl~R~g~  212 (252)
T d1zmta1         143 ---------TYTSARAGACTLANALSKELGEYN-IPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGT  212 (252)
T ss_dssp             ---------HHHHHHHHHHHHHHHHHHHHGGGT-CCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSSSSSCBC
T ss_pred             ---------ccccccccHHHHHHHHHHHhcccC-cEEEEEecCCCcCcchhhhhhcccccCCHHHHHHHHhcCCCCCCcC
Confidence                     3999995    7777777777765 999999999999987654211     112222222    1222   


Q ss_pred             ---------CCCCCCCchhhhhhhhhccceeEE
Q 025755          216 ---------FFTTPSHSYMLERTLVLNQGVRLY  239 (248)
Q Consensus       216 ---------~l~~~~~~~~~g~~l~vd~g~~~~  239 (248)
                               ||.++.+.|+|||+|.||||+.++
T Consensus       213 pedvA~~v~fL~S~~s~~iTG~~i~vdGG~~~~  245 (252)
T d1zmta1         213 QKELGELVAFLASGSCDYLTGQVFWLAGGFPMI  245 (252)
T ss_dssp             HHHHHHHHHHHHTTSCGGGTTCEEEESTTCCCC
T ss_pred             HHHHHHHHHHHhCchhcCCcCCeEEECCCceeC
Confidence                     899999999999999999998764

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.97  E-value=1.4e-32  Score=231.04  Aligned_cols=235  Identities=17%  Similarity=0.130  Sum_probs=176.4

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCch--hhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEE
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDE--KNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVF   82 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi   82 (248)
                      +||+||||||||+||++++++|+++|++|.++.++....  ........  ...++.++.+|++|.+.+..+++..|.|+
T Consensus         1 ~~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~~~~--~~~~i~~~~~Di~d~~~~~~~~~~~~~v~   78 (346)
T d1oc2a_           1 QFKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAI--LGDRVELVVGDIADAELVDKLAAKADAIV   78 (346)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGG--CSSSEEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred             CcCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHHHHh--hcCCeEEEEccCCCHHHHHHHHhhhhhhh
Confidence            478999999999999999999999999877766643211  11111111  24689999999999999999999999999


Q ss_pred             EccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCC---CCCCchhhhcccc
Q 025755           83 HVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDE---ECWSDEEFCKATE  159 (248)
Q Consensus        83 ~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e---~~~~~~~~~~~~~  159 (248)
                      |+|+..........+.+++++|+.|+.++++++...+. ++|++||.. +|+........+..+   .....++....|.
T Consensus        79 ~~a~~~~~~~~~~~~~~~~~~N~~g~~nll~~~~~~~~-k~i~~ss~~-vyg~~~~~~~~~~~~~~~~~~~~e~~~~~p~  156 (346)
T d1oc2a_          79 HYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDI-RFHHVSTDE-VYGDLPLREDLPGHGEGPGEKFTAETNYNPS  156 (346)
T ss_dssp             ECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGG-GGCCBCCGGGSTTTTCSTTSSBCTTSCCCCC
T ss_pred             hhhhcccccchhhCcccceeeehHhHHhhhhhhccccc-cccccccce-EecccCccccccccccCcccccccCCCCCCC
Confidence            99987765433334578899999999999999999884 889998865 444321111111111   1122333444566


Q ss_pred             chHHHHHHHHHHHHHHHHHhCCccEEEEccCeeecCCCCCCCCccHHHHHHHHcCCCCCCCCCchhhhhhhhhccceeEE
Q 025755          160 NYYCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKGFFFTTPSHSYMLERTLVLNQGVRLY  239 (248)
Q Consensus       160 ~~Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~l~vd~g~~~~  239 (248)
                      +.|+.+|.++|.+++.++++++++++++||+.+|||..... .....++.....+..+....++....+.++++|.+.++
T Consensus       157 s~Y~~sK~~~E~~~~~~~~~~~i~~~ilR~~~vyGp~~~~~-~~~~~~i~~~~~~~~~~i~~~g~~~r~~i~v~D~a~a~  235 (346)
T d1oc2a_         157 SPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIE-KFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGV  235 (346)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTT-SHHHHHHHHHHHTCCCEEETTSCCEEECEEHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHcCCCEEEEeecceeCCCCCcc-chhHHHHHHHHcCCceeEeCCCCccccccchhhHHHHH
Confidence            77999999999999999988889999999999999976543 45567777788888777777788888899999988876


Q ss_pred             Eeecc
Q 025755          240 RCKIQ  244 (248)
Q Consensus       240 ~~~~~  244 (248)
                      ..++.
T Consensus       236 ~~~~~  240 (346)
T d1oc2a_         236 WAILT  240 (346)
T ss_dssp             HHHHH
T ss_pred             HHHHh
Confidence            65543

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.97  E-value=1.3e-32  Score=226.61  Aligned_cols=208  Identities=16%  Similarity=0.025  Sum_probs=150.8

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCch--------hhHHhhhhcCCCCCeEEEEccCCCHHHHHHH
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDE--------KNAHLKKLEGASENLQLFKTDLLDYEALCAA   74 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~--------~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~   74 (248)
                      .|+||++|||||++|||+++++.|+++|++|++.+|+.+..        .....+++.   .......+|+.|.++++++
T Consensus         4 ~l~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~d~~~~~~~~~~   80 (302)
T d1gz6a_           4 RFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIR---RRGGKAVANYDSVEAGEKL   80 (302)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHH---HTTCEEEEECCCGGGHHHH
T ss_pred             CcCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHh---hcccccccccchHHHHHHH
Confidence            48999999999999999999999999999999998865321        112222222   2334566788887766665


Q ss_pred             hC-------CCCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHH----hcCCCEEEEEeccceeccCCCCC
Q 025755           75 TA-------GCTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCV----KAKVKRVVVVSSIGAVMLNPNWP  139 (248)
Q Consensus        75 ~~-------~id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~----~~~~~~iV~vSS~~~~~~~~~~~  139 (248)
                      ++       ++|++|||||+......    .+.|+.++++|+.++.++++++.    +.+.++||++||..+..+.+...
T Consensus        81 v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~~~~~~~~~  160 (302)
T d1gz6a_          81 VKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFGQA  160 (302)
T ss_dssp             HHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCH
T ss_pred             HHHHHHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhhcCCCCCcH
Confidence            43       68999999998765422    34567899999999887777764    44778999999998888776543


Q ss_pred             CCCccCCCCCCchhhhccccchHHHHHH----HHHHHHHHHHHhCCccEEEEccCeeecCCCCCCCCccHHHHHHHHcCC
Q 025755          140 KGQVMDEECWSDEEFCKATENYYCLAKT----IAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKGF  215 (248)
Q Consensus       140 ~~~~~~e~~~~~~~~~~~~~~~Y~~sK~----~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~~~  215 (248)
                      .                     |+.||+    +++.++.+++++ |||||+|+||.+.++......   .. +.+...-.
T Consensus       161 ~---------------------Y~asKaal~~lt~~la~E~~~~-gIrVN~I~PG~~~t~~~~~~~---~~-~~~~~~Pe  214 (302)
T d1gz6a_         161 N---------------------YSAAKLGLLGLANTLVIEGRKN-NIHCNTIAPNAGSRMTETVMP---ED-LVEALKPE  214 (302)
T ss_dssp             H---------------------HHHHHHHHHHHHHHHHHHTGGG-TEEEEEEEEECCSTTTGGGSC---HH-HHHHSCGG
T ss_pred             H---------------------HHHHHHHHHHHHHHHHHHHhcc-CCceeeeCCCCCCcchhhcCc---Hh-hHhcCCHH
Confidence            3                     999996    666666666655 599999999998766543221   11 22221111


Q ss_pred             -------CCCCCCCchhhhhhhhhccceeEEE
Q 025755          216 -------FFTTPSHSYMLERTLVLNQGVRLYR  240 (248)
Q Consensus       216 -------~l~~~~~~~~~g~~l~vd~g~~~~~  240 (248)
                             ||.++. .++||++|.||||+.+-.
T Consensus       215 dvA~~v~fL~S~~-a~itG~~i~vdGG~~~~~  245 (302)
T d1gz6a_         215 YVAPLVLWLCHES-CEENGGLFEVGAGWIGKL  245 (302)
T ss_dssp             GTHHHHHHHTSTT-CCCCSCEEEEETTEEEEE
T ss_pred             HHHHHHHHHcCCC-cCCCCcEEEeCCCceeEE
Confidence                   777765 489999999999987654

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=4.1e-32  Score=227.97  Aligned_cols=228  Identities=19%  Similarity=0.116  Sum_probs=169.1

Q ss_pred             cEE-EEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhh-----cCCCCCeEEEEccCCCHHHHHHHhC--CC
Q 025755            7 ERV-CVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKL-----EGASENLQLFKTDLLDYEALCAATA--GC   78 (248)
Q Consensus         7 k~v-lVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~~~~~Di~d~~~~~~~~~--~i   78 (248)
                      ||| |||||+||||++++++|+++||+|++++|..........+.+     .....++.++.+|++|.+.+.++++  ++
T Consensus         1 kKI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~   80 (347)
T d1t2aa_           1 RNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKP   80 (347)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHCC
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhccc
Confidence            567 999999999999999999999999999996532111111111     1113578999999999999999986  56


Q ss_pred             CEEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCC---CEEEEEeccceeccCCCCCCCCccCCCCCCchhhh
Q 025755           79 TGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKV---KRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFC  155 (248)
Q Consensus        79 d~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~---~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~  155 (248)
                      ++++|+++.............++++|+.|+.++++++++.+.   .++||+||.+ +|+.+.   ..+++|+++..|   
T Consensus        81 ~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~~~~i~~SS~~-vyg~~~---~~~~~E~~~~~P---  153 (347)
T d1t2aa_          81 TEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSE-LYGKVQ---EIPQKETTPFYP---  153 (347)
T ss_dssp             SEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGG-GTCSCS---SSSBCTTSCCCC---
T ss_pred             ceeeeeeeccccchhhccchhhhhhHHHHHHHHHHHHHHcCCCCCcEEEEecchh-eecCCC---CCCCCCCCCCCC---
Confidence            899999987654333344466789999999999999998754   4899999965 666543   567888877654   


Q ss_pred             ccccchHHHHHHHHHHHHHHHHHhCCccEEEEccCeeecCCCCCCC--C-ccHHHHHHHHcCCCCCCCCCchhhhhhhhh
Q 025755          156 KATENYYCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTI--N-TSSLLLLGFLKGFFFTTPSHSYMLERTLVL  232 (248)
Q Consensus       156 ~~~~~~Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~--~-~~~~~~~~~~~~~~l~~~~~~~~~g~~l~v  232 (248)
                         .++||.||.++|.++..+.++++++++++||+.+|||......  . ....++.....+..+...+++....+.+++
T Consensus       154 ---~~~Yg~sK~~aE~~~~~~~~~~~~~~~ilr~~~vyGp~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~g~~~r~~i~v  230 (347)
T d1t2aa_         154 ---RSPYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHA  230 (347)
T ss_dssp             ---CSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEEH
T ss_pred             ---CCHHHHHHHHHHHHHHHHHHHhCCCEEEEEecceeCCCCCCCccccccceeeehhhcCCcceeecCCCcceeeeeEe
Confidence               5669999999999999999888899999999999999765431  1 112233333444445555566666778999


Q ss_pred             ccceeEEEeecc
Q 025755          233 NQGVRLYRCKIQ  244 (248)
Q Consensus       233 d~g~~~~~~~~~  244 (248)
                      +|...++..+++
T Consensus       231 ~D~~~a~~~~~~  242 (347)
T d1t2aa_         231 KDYVEAMWLMLQ  242 (347)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             cHHHHHHHHHhh
Confidence            998887766554

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.97  E-value=1.2e-31  Score=222.88  Aligned_cols=229  Identities=18%  Similarity=0.094  Sum_probs=174.6

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCC--CCEEEEc
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAG--CTGVFHV   84 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~--id~vi~~   84 (248)
                      |+|||||||||||+++++.|+++||+|++++|.........++.+.. .+++.++++|++|.+.+.+.+..  .++++|+
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~~~   79 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGI-EGDIQYEDGDMADACSVQRAVIKAQPQEVYNL   79 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTC-GGGEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHHHHhcc-cCCcEEEEccccChHHhhhhhccccccccccc
Confidence            79999999999999999999999999999999765433343443322 35799999999999999988764  6788888


Q ss_pred             cccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCC-EEEEEeccceeccCCCCCCCCccCCCCCCchhhhccccchHH
Q 025755           85 ACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVK-RVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYC  163 (248)
Q Consensus        85 ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~-~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~  163 (248)
                      |+..........+.++++.|+.|+.++++++++.+.. ++++.|| ..+++...   ..+.+|+++..+      .+.|+
T Consensus        80 a~~~~~~~~~~~~~~~~~~n~~g~~~~l~~~~~~~~~~~~i~~Ss-~~~~~~~~---~~~~~E~~~~~p------~~~Y~  149 (321)
T d1rpna_          80 AAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQAST-SEMFGLIQ---AERQDENTPFYP------RSPYG  149 (321)
T ss_dssp             CSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEE-GGGGCSCS---SSSBCTTSCCCC------CSHHH
T ss_pred             cccccccccccchHHHHhhhhhchHHHHHHHHHhCCCcccccccc-hhhcCccc---CCCCCCCCCccc------cChhH
Confidence            8776554444555788999999999999999998765 5555555 55666543   455677776654      45699


Q ss_pred             HHHHHHHHHHHHHHHhCCccEEEEccCeeecCCCCCCC--CccHHHHHHHHcCC-CCCCCCCchhhhhhhhhccceeEEE
Q 025755          164 LAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTI--NTSSLLLLGFLKGF-FFTTPSHSYMLERTLVLNQGVRLYR  240 (248)
Q Consensus       164 ~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~--~~~~~~~~~~~~~~-~l~~~~~~~~~g~~l~vd~g~~~~~  240 (248)
                      .+|.++|.++..+..+++++++++||+++|||......  .....++.+...+. .....+++....+.+||+|.+.++.
T Consensus       150 ~sK~~~E~~~~~~~~~~~~~~~~lr~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~i~~g~g~~~r~~i~v~D~~~~~~  229 (321)
T d1rpna_         150 VAKLYGHWITVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMW  229 (321)
T ss_dssp             HHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhcCCcEEEEEEecccCCCccccccHHHHHHHHHHHHhCCCCcEEECCCCeEEccEEeHHHHHHHH
Confidence            99999999999999888899999999999999765431  22334455555544 3334455666677899999998887


Q ss_pred             eeccCC
Q 025755          241 CKIQIP  246 (248)
Q Consensus       241 ~~~~~p  246 (248)
                      .+++.|
T Consensus       230 ~~~~~~  235 (321)
T d1rpna_         230 LMLQQD  235 (321)
T ss_dssp             HHHHSS
T ss_pred             HHHhcC
Confidence            776544

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=9e-32  Score=217.01  Aligned_cols=215  Identities=13%  Similarity=0.135  Sum_probs=152.5

Q ss_pred             CCCCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCC--CCCeEEEEccCCCHHHHHHHhC--
Q 025755            1 MSGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGA--SENLQLFKTDLLDYEALCAATA--   76 (248)
Q Consensus         1 m~~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Di~d~~~~~~~~~--   76 (248)
                      |.+|++|++|||||++|||++++++|+++|++|++++|+..+ .+...+++...  ..++.++++|++|+++++++++  
T Consensus         5 M~~lk~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~-l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~   83 (257)
T d1xg5a_           5 MERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGN-IEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAI   83 (257)
T ss_dssp             CGGGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHH-HHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHH-HHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHH
Confidence            566899999999999999999999999999999999998643 33333444332  3578899999999999888765  


Q ss_pred             -----CCCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHH----hcC--CCEEEEEeccceeccCCCCCCC
Q 025755           77 -----GCTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCV----KAK--VKRVVVVSSIGAVMLNPNWPKG  141 (248)
Q Consensus        77 -----~id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~----~~~--~~~iV~vSS~~~~~~~~~~~~~  141 (248)
                           ++|++|||||.......    .+.|+..+++|+.++..+.+++.    +.+  .++||++||..+....+...  
T Consensus        84 ~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~p~~~--  161 (257)
T d1xg5a_          84 RSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSV--  161 (257)
T ss_dssp             HHHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSCGG--
T ss_pred             HHhcCCCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCCCCCcc--
Confidence                 58999999998765433    34567789999999877766653    333  58999999987654332100  


Q ss_pred             CccCCCCCCchhhhccccchHHHHHH----HHHHHHHHHH-HhCCccEEEEccCeeecCCCCCCC-CccHHHHHHHHcCC
Q 025755          142 QVMDEECWSDEEFCKATENYYCLAKT----IAEIQALEYA-KRGELDIVTVCPSIVIGPMLQPTI-NTSSLLLLGFLKGF  215 (248)
Q Consensus       142 ~~~~e~~~~~~~~~~~~~~~Y~~sK~----~~e~l~~~~~-~~~~i~v~~vrpg~i~g~~~~~~~-~~~~~~~~~~~~~~  215 (248)
                                       ...|+.+|+    +++.++.++. ...+||||+|+||.+.+++..... ............++
T Consensus       162 -----------------~~~Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~r  224 (257)
T d1xg5a_         162 -----------------THFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDPEKAAATYEQMK  224 (257)
T ss_dssp             -----------------GHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCHHHHHHHHC---
T ss_pred             -----------------cHHHHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCChhhhhcChhhHHHHHhcCCCCC
Confidence                             133999996    5555555553 234799999999999887532211 11122222222222


Q ss_pred             ------------CCCCCCCchhhhhhhhhccc
Q 025755          216 ------------FFTTPSHSYMLERTLVLNQG  235 (248)
Q Consensus       216 ------------~l~~~~~~~~~g~~l~vd~g  235 (248)
                                  ||.++.+.|+|||++..++|
T Consensus       225 ~~~pedvA~~v~fL~s~~a~~itG~i~i~~~g  256 (257)
T d1xg5a_         225 CLKPEDVAEAVIYVLSTPAHIQIGDIQMRPTG  256 (257)
T ss_dssp             CBCHHHHHHHHHHHHHSCTTEEEEEEEEEETT
T ss_pred             CcCHHHHHHHHHHHhCChhcCeECCEEEEeCC
Confidence                        78888999999998666665

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=99.97  E-value=4.2e-31  Score=210.89  Aligned_cols=204  Identities=15%  Similarity=0.109  Sum_probs=152.5

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCCCe-------EEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC---
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKGYM-------VHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA---   76 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g~~-------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~---   76 (248)
                      ++||||||++|||++++++|+++|++       |++.+|+.++ .+...+++.....++.++.+|++|.++++++++   
T Consensus         2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~-l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~   80 (240)
T d2bd0a1           2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAAD-LEKISLECRAEGALTDTITADISDMADVRRLTTHIV   80 (240)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHH-HHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHH-HHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHH
Confidence            46899999999999999999999997       8888888643 344445555666788999999999999888775   


Q ss_pred             ----CCCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHH----hcCCCEEEEEeccceeccCCCCCCCCcc
Q 025755           77 ----GCTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCV----KAKVKRVVVVSSIGAVMLNPNWPKGQVM  144 (248)
Q Consensus        77 ----~id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~----~~~~~~iV~vSS~~~~~~~~~~~~~~~~  144 (248)
                          ++|++|||||.......    .++|+..+++|+.|+..+.+++.    +.+.++||++||..+..+.++...    
T Consensus        81 ~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~----  156 (240)
T d2bd0a1          81 ERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSI----  156 (240)
T ss_dssp             HHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHH----
T ss_pred             HHcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhhcCCCCCChH----
Confidence                58999999998765422    34567899999999877776665    446789999999888777665333    


Q ss_pred             CCCCCCchhhhccccchHHHHHH----HHHHHHHHHHHhCCccEEEEccCeeecCCCCCCCC------ccHHHHHHHHcC
Q 025755          145 DEECWSDEEFCKATENYYCLAKT----IAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTIN------TSSLLLLGFLKG  214 (248)
Q Consensus       145 ~e~~~~~~~~~~~~~~~Y~~sK~----~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~------~~~~~~~~~~~~  214 (248)
                                       |+.||+    +++.++.+++++ |||||+|+||.+.+|+......      ..+.-+..... 
T Consensus       157 -----------------Y~asK~al~~lt~~la~el~~~-gIrvn~i~PG~v~T~~~~~~~~~~~~~~~~PedvA~~v~-  217 (240)
T d2bd0a1         157 -----------------YCMSKFGQRGLVETMRLYARKC-NVRITDVQPGAVYTPMWGKVDDEMQALMMMPEDIAAPVV-  217 (240)
T ss_dssp             -----------------HHHHHHHHHHHHHHHHHHHTTT-TEEEEEEEECCBCSTTTCCCCSTTGGGSBCHHHHHHHHH-
T ss_pred             -----------------HHHHHHHHHHHHHHHHHHhCcC-CeEEEEeeeCcccCchhhhcCHhhHhcCCCHHHHHHHHH-
Confidence                             999995    777777777665 5999999999999998654321      12222222222 


Q ss_pred             CCCCCCCCchhhhhh-hhhccc
Q 025755          215 FFFTTPSHSYMLERT-LVLNQG  235 (248)
Q Consensus       215 ~~l~~~~~~~~~g~~-l~vd~g  235 (248)
                       ++.+....++++++ |..+||
T Consensus       218 -~l~s~~~~~~~~~~~i~p~~G  238 (240)
T d2bd0a1         218 -QAYLQPSRTVVEEIILRPTSG  238 (240)
T ss_dssp             -HHHTSCTTEEEEEEEEEETTC
T ss_pred             -HHHcCCccCccCCEEEEecCC
Confidence             56666777777764 445555

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.97  E-value=1.6e-31  Score=228.23  Aligned_cols=236  Identities=17%  Similarity=0.109  Sum_probs=172.5

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcC-------------C--CchhhHHhhhhc-CCCCCeEEEEccCCCHH
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRD-------------P--CDEKNAHLKKLE-GASENLQLFKTDLLDYE   69 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~-------------~--~~~~~~~~~~~~-~~~~~~~~~~~Di~d~~   69 (248)
                      ||+|||||||||||++++++|+++||+|++++.-             .  ............ ....++.++++|++|.+
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~   80 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFE   80 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCCCHH
Confidence            6899999999999999999999999999998610             0  000111111111 11357899999999999


Q ss_pred             HHHHHhC--CCCEEEEccccCCCCCCC---CccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCcc
Q 025755           70 ALCAATA--GCTGVFHVACPVPVGKVP---NPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVM  144 (248)
Q Consensus        70 ~~~~~~~--~id~vi~~ag~~~~~~~~---~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~  144 (248)
                      .++++++  ++|+|||+|+......+.   ..+..++++|+.|+.+++++|++.+.++.++.+|+..+++...    .+.
T Consensus        81 ~l~~~~~~~~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~~i~~ss~~~~~~~~----~~~  156 (393)
T d1i24a_          81 FLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPN----IDI  156 (393)
T ss_dssp             HHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCS----SCB
T ss_pred             HHHHHHHhhcchheeccccccccccccccccccccccccccccccHHHHHHHHhccccceeeccccccccccc----ccc
Confidence            9999987  579999999876543222   2234678999999999999999987765544444455665432    222


Q ss_pred             CCCCCC--------chhhhccccchHHHHHHHHHHHHHHHHHhCCccEEEEccCeeecCCCCCC----------------
Q 025755          145 DEECWS--------DEEFCKATENYYCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPT----------------  200 (248)
Q Consensus       145 ~e~~~~--------~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~----------------  200 (248)
                      .|....        ....+..|.++|+.||.++|.++..+.+++++++.++||+++|||.....                
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~~l~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~  236 (393)
T d1i24a_         157 EEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVF  236 (393)
T ss_dssp             CSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTTT
T ss_pred             ccccccccccccccccccccccccHHHHHhhhhcccccccccccceeeeecccccccCCCcccccccccccccccccccc
Confidence            222111        11224466778999999999999999998899999999999999975432                


Q ss_pred             CCccHHHHHHHHcCCCCCCCCCchhhhhhhhhccceeEEEeeccC
Q 025755          201 INTSSLLLLGFLKGFFFTTPSHSYMLERTLVLNQGVRLYRCKIQI  245 (248)
Q Consensus       201 ~~~~~~~~~~~~~~~~l~~~~~~~~~g~~l~vd~g~~~~~~~~~~  245 (248)
                      ......++.+...++.+.+.+++..+.+.++|++.+.++..+++.
T Consensus       237 ~~~i~~~~~~~~~~~~~~i~g~~~~~rd~v~v~D~~~a~~~~~~~  281 (393)
T d1i24a_         237 GTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIAN  281 (393)
T ss_dssp             CCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHS
T ss_pred             ccchhhhhHHhhcCCeeEEeeecccccccccccchHHHHHHHHHh
Confidence            123467788888888888878888888999999998887777653

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.97  E-value=4.1e-30  Score=215.97  Aligned_cols=224  Identities=18%  Similarity=0.113  Sum_probs=156.0

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC--CCCEEEEc
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA--GCTGVFHV   84 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~--~id~vi~~   84 (248)
                      |+||||||+||||++++++|+++|++|+++++..................++.++++|++|.++++++++  ++|+|||+
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vihl   81 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSVIHF   81 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCEEEEC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhcccCCeEEEeecCCHHHHHHHHhccCCCEEEEc
Confidence            7899999999999999999999999999998644321111111111124578999999999999999887  78999999


Q ss_pred             cccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccccchHHH
Q 025755           85 ACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCL  164 (248)
Q Consensus        85 ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~  164 (248)
                      |+..........+..++.+|+.|+.++++++++.+++++|++||...+..........+++|+.+..      |.+.|+.
T Consensus        82 Aa~~~~~~~~~~~~~~~~~N~~~t~~ll~~~~~~~i~~~i~~SS~~vyg~~~~~~~~~~~~e~~~~~------p~~~Y~~  155 (347)
T d1z45a2          82 AGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEECPLG------PTNPYGH  155 (347)
T ss_dssp             CSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCC------CCSHHHH
T ss_pred             cccccccccccCcccccccchhhhHHHHHHHHhcccceEEeecceeeecCcccCCCCCccccccCCC------CCChhHh
Confidence            9976543223344678899999999999999999999999999977554333323344556655544      4566999


Q ss_pred             HHHHHHHHHHHHHHh--CCccEEEEccCeeecCCCCCC--------CCccHHHHHHHHc--CCCCCCCCCchhhhhhhhh
Q 025755          165 AKTIAEIQALEYAKR--GELDIVTVCPSIVIGPMLQPT--------INTSSLLLLGFLK--GFFFTTPSHSYMLERTLVL  232 (248)
Q Consensus       165 sK~~~e~l~~~~~~~--~~i~v~~vrpg~i~g~~~~~~--------~~~~~~~~~~~~~--~~~l~~~~~~~~~g~~l~v  232 (248)
                      ||.++|.++.++...  ++++++++||+++||+.....        ......++.....  +..+.+.+++....+..++
T Consensus       156 sK~~~E~~~~~~~~~~~~~~~~~~lR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~~~~~  235 (347)
T d1z45a2         156 TKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPI  235 (347)
T ss_dssp             HHHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------CCSSCE
T ss_pred             HHHHHHHHHHHHHHhhccCCcEEEEeecceEeecCCCccCCCccccHHHHHHHHHHHHhcCCCCeEEeCCCccccCCcee
Confidence            999999999998753  478999999999999754321        1122223333332  3345555555555555555


Q ss_pred             ccce
Q 025755          233 NQGV  236 (248)
Q Consensus       233 d~g~  236 (248)
                      ++-+
T Consensus       236 ~d~~  239 (347)
T d1z45a2         236 RDYI  239 (347)
T ss_dssp             ECEE
T ss_pred             eeee
Confidence            5543

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.2e-30  Score=208.53  Aligned_cols=176  Identities=16%  Similarity=0.116  Sum_probs=140.6

Q ss_pred             CCCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-----
Q 025755            2 SGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-----   76 (248)
Q Consensus         2 ~~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-----   76 (248)
                      +++.||+++||||++|||++++++|+++|++|++.+|+.++ .+...+++....+++.++.||++|.++++++++     
T Consensus         3 ~~l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~-l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~   81 (244)
T d1yb1a_           3 KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHG-LEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAE   81 (244)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHH-HHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHH-HHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH
Confidence            46899999999999999999999999999999999998743 334444555556789999999999999888775     


Q ss_pred             --CCCEEEEccccCCCCCCC----CccccchhhhHHHHHHHHHHHH----hcCCCEEEEEeccceeccCCCCCCCCccCC
Q 025755           77 --GCTGVFHVACPVPVGKVP----NPEVQLIDPAVVGTKNVLNSCV----KAKVKRVVVVSSIGAVMLNPNWPKGQVMDE  146 (248)
Q Consensus        77 --~id~vi~~ag~~~~~~~~----~~~~~~~~~n~~g~~~~~~~~~----~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e  146 (248)
                        ++|++|||||........    +.|+.++++|+.|+.++.+++.    +.+.++||++||..+..+.+..        
T Consensus        82 ~g~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~~~~~~~--------  153 (244)
T d1yb1a_          82 IGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFL--------  153 (244)
T ss_dssp             TCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHHHH--------
T ss_pred             cCCCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhcCCCCCc--------
Confidence              589999999987665432    3456789999999877766654    4577899999998877665543        


Q ss_pred             CCCCchhhhccccchHHHHHH----HHHHHHHHHHHh--CCccEEEEccCeeecCCCCC
Q 025755          147 ECWSDEEFCKATENYYCLAKT----IAEIQALEYAKR--GELDIVTVCPSIVIGPMLQP  199 (248)
Q Consensus       147 ~~~~~~~~~~~~~~~Y~~sK~----~~e~l~~~~~~~--~~i~v~~vrpg~i~g~~~~~  199 (248)
                                   .+|+.||+    +++.++.++++.  .||+|++|+||++.+++...
T Consensus       154 -------------~~Y~asKaal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~~~~~  199 (244)
T d1yb1a_         154 -------------LAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKN  199 (244)
T ss_dssp             -------------HHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTC
T ss_pred             -------------HHHHHHHHHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCChhhhC
Confidence                         33999995    677777777654  36999999999999987654

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.97  E-value=2.4e-30  Score=218.55  Aligned_cols=228  Identities=14%  Similarity=0.073  Sum_probs=166.6

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEEc
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFHV   84 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~~   84 (248)
                      ++|+||||||+||||+++++.|+++|++|+++++........       ......+..+|+.|.+.+.++++++|.|||+
T Consensus        14 ~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~-------~~~~~~~~~~D~~~~~~~~~~~~~~d~Vih~   86 (363)
T d2c5aa1          14 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTE-------DMFCDEFHLVDLRVMENCLKVTEGVDHVFNL   86 (363)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCG-------GGTCSEEEECCTTSHHHHHHHHTTCSEEEEC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccchhh-------hcccCcEEEeechhHHHHHHHhhcCCeEeec
Confidence            578899999999999999999999999999998765421111       1235678889999999999999999999999


Q ss_pred             cccCCCCCC-CCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCC-CchhhhccccchH
Q 025755           85 ACPVPVGKV-PNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECW-SDEEFCKATENYY  162 (248)
Q Consensus        85 ag~~~~~~~-~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~-~~~~~~~~~~~~Y  162 (248)
                      |+....... ...+...+..|+.++.++++++.+.+++++|++||...+....    ..+.+|+.. ..+..+.+|.+.|
T Consensus        87 a~~~~~~~~~~~~~~~~~~~n~~gt~~ll~~~~~~~vk~~i~~SS~~~~~~~~----~~~~~~~~~~~~e~~~~~p~~~Y  162 (363)
T d2c5aa1          87 AADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFK----QLETTNVSLKESDAWPAEPQDAF  162 (363)
T ss_dssp             CCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGG----SSSSSSCEECGGGGSSBCCSSHH
T ss_pred             ccccccccccccccccccccccchhhHHHHhHHhhCccccccccccccccccc----cccccccccccccCCcCCCCCHH
Confidence            987654321 3455778899999999999999999999999999976443332    334444432 3345556777889


Q ss_pred             HHHHHHHHHHHHHHHHhCCccEEEEccCeeecCCCCCCCC----ccHHHHHHHHcCCCCCCCCCchhhhhhhhhccceeE
Q 025755          163 CLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTIN----TSSLLLLGFLKGFFFTTPSHSYMLERTLVLNQGVRL  238 (248)
Q Consensus       163 ~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~----~~~~~~~~~~~~~~l~~~~~~~~~g~~l~vd~g~~~  238 (248)
                      +.+|.++|.+++.+.++++++++++||+++|||.+.....    ..................+++-...+.+++++.+.+
T Consensus       163 g~sK~~~E~~~~~~~~~~gl~~~ilR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~~~~  242 (363)
T d2c5aa1         163 GLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEG  242 (363)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCCCEEEEEeeeEeccCCcccccccccccccccccccccccccccCCCCeEEEEeehhHHHHH
Confidence            9999999999999998888999999999999997654311    112222333333333333333334566777776555


Q ss_pred             EEeec
Q 025755          239 YRCKI  243 (248)
Q Consensus       239 ~~~~~  243 (248)
                      +..++
T Consensus       243 ~~~~~  247 (363)
T d2c5aa1         243 VLRLT  247 (363)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            44433

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=99.97  E-value=9.2e-30  Score=213.12  Aligned_cols=181  Identities=20%  Similarity=0.173  Sum_probs=139.1

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhh--HHhhhhcCCCCCeEEEEccCCCHHHHHHHhC--CCCEEE
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKN--AHLKKLEGASENLQLFKTDLLDYEALCAATA--GCTGVF   82 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~--~id~vi   82 (248)
                      |+||||||+||||+++++.|+++|++|++++|.......  ...+..  ...++.++++|++|.+.+.++++  ++|+||
T Consensus         1 MKiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~Vi   78 (338)
T d1udca_           1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERL--GGKHPTFVEGDIRNEALMTEILHDHAIDTVI   78 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHH--HTSCCEEEECCTTCHHHHHHHHHHTTCSEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhh--cCCCCEEEEeecCCHHHHHHHHhccCCCEEE
Confidence            469999999999999999999999999999874322111  111111  13579999999999999999988  799999


Q ss_pred             EccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccccchH
Q 025755           83 HVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYY  162 (248)
Q Consensus        83 ~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y  162 (248)
                      |+|+..........+.+++++|+.|+.++++++++.+++++|++||...+.+..    ..+..|+.+     ...|...|
T Consensus        79 HlAa~~~~~~~~~~~~~~~~~Nv~gt~nlL~~~~~~~v~~~i~~Ss~~vy~~~~----~~~~~e~~~-----~~~p~~~Y  149 (338)
T d1udca_          79 HFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDQP----KIPYVESFP-----TGTPQSPY  149 (338)
T ss_dssp             ECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCC----SSSBCTTSC-----CCCCSSHH
T ss_pred             ECCCccchhhHHhCHHHHHHhHHHHHHHHHHHHHHhCCCEEEecCcceEEcccc----ccccccccc-----cCCCcchH
Confidence            999975433222344688999999999999999999999999999976443332    222233322     22345669


Q ss_pred             HHHHHHHHHHHHHHHHh-CCccEEEEccCeeecCCCC
Q 025755          163 CLAKTIAEIQALEYAKR-GELDIVTVCPSIVIGPMLQ  198 (248)
Q Consensus       163 ~~sK~~~e~l~~~~~~~-~~i~v~~vrpg~i~g~~~~  198 (248)
                      +.+|..+|.++..+... ++++++++||+++|||...
T Consensus       150 ~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~  186 (338)
T d1udca_         150 GKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPS  186 (338)
T ss_dssp             HHHHHHHHHHHHHHHHHSTTCEEEEEEECEEECCCTT
T ss_pred             HHHHhhhhHHHHHHHhhccCCeEEEEeeccEEeccCC
Confidence            99999999999876654 4799999999999998754

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=99.96  E-value=3.6e-30  Score=215.99  Aligned_cols=236  Identities=25%  Similarity=0.310  Sum_probs=168.5

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhH-HhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEE
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNA-HLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFH   83 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~   83 (248)
                      .||+||||||+|+||++++++|+++|++|+++.|+..+.... ..............+.+|++|.+++..+++++|+|+|
T Consensus        10 ~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~v~~   89 (342)
T d1y1pa1          10 EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGVAH   89 (342)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEEEE
T ss_pred             CcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhcccchhhhh
Confidence            579999999999999999999999999999999976422111 1111122233456678999999999999999999999


Q ss_pred             ccccCCCCCCCCccccchhhhHHHHHHHHHHHHhc-CCCEEEEEeccceeccCCCCCCCCccCCCCCC----------ch
Q 025755           84 VACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKA-KVKRVVVVSSIGAVMLNPNWPKGQVMDEECWS----------DE  152 (248)
Q Consensus        84 ~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~-~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~----------~~  152 (248)
                      +|+....   ...+..+++.|+.|+.+++++|.+. +.+++||+||..+.++..........+|+.+.          .+
T Consensus        90 ~a~~~~~---~~~~~~~~~~nv~gt~~ll~~~~~~~~v~~~i~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e  166 (342)
T d1y1pa1          90 IASVVSF---SNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPE  166 (342)
T ss_dssp             CCCCCSC---CSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHHSCT
T ss_pred             hcccccc---cccccccccchhhhHHHHHHhhhcccccccccccccceeeccCCCCCCCccccccccccccccccccccc
Confidence            9997654   2345678899999999999999987 68999999997655443222223444454432          22


Q ss_pred             hhhccccchHHHHHHHHHHHHHHHHHhC--CccEEEEccCeeecCCCCCC--CCccHHHHHHHHcCCCCCCCCCchhhhh
Q 025755          153 EFCKATENYYCLAKTIAEIQALEYAKRG--ELDIVTVCPSIVIGPMLQPT--INTSSLLLLGFLKGFFFTTPSHSYMLER  228 (248)
Q Consensus       153 ~~~~~~~~~Y~~sK~~~e~l~~~~~~~~--~i~v~~vrpg~i~g~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~g~  228 (248)
                      +....|.++|+.+|..+|.++..|++++  ++++++++|+.++||...+.  ......++.++..+....... ......
T Consensus       167 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~i~p~~v~Gp~~~~~~~~~~~~~~~~~l~~g~~~~~~~-~~~~~~  245 (342)
T d1y1pa1         167 SDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALA-LMPPQY  245 (342)
T ss_dssp             TSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHHH-TCCSEE
T ss_pred             cCCCCCcCcccchhHhHHHHHHHhhhhcccccccceecccceeCCCCCccccccchHHHHHHHHcCCcCcccC-Ccccee
Confidence            3344556779999999999999998765  47889999999999965443  234566777777776432111 112234


Q ss_pred             hhhhccceeEEEeecc
Q 025755          229 TLVLNQGVRLYRCKIQ  244 (248)
Q Consensus       229 ~l~vd~g~~~~~~~~~  244 (248)
                      .++|+|...++..++.
T Consensus       246 ~v~v~Dva~~~i~~l~  261 (342)
T d1y1pa1         246 YVSAVDIGLLHLGCLV  261 (342)
T ss_dssp             EEEHHHHHHHHHHHHH
T ss_pred             eeeHHHHHHHHHHhhc
Confidence            6777776665554544

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.96  E-value=3.7e-30  Score=215.20  Aligned_cols=230  Identities=16%  Similarity=0.079  Sum_probs=165.8

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhc-----CCCCCeEEEEccCCCHHHHHHHhC--CC
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLE-----GASENLQLFKTDLLDYEALCAATA--GC   78 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~~~Di~d~~~~~~~~~--~i   78 (248)
                      .|++|||||||+||+++++.|+++||+|++++|............+.     .....+.++.+|+++.+.+.+.++  ++
T Consensus         1 ~k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~   80 (339)
T d1n7ha_           1 RKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKP   80 (339)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCC
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhhcc
Confidence            48999999999999999999999999999999964321111111111     123568899999999999998875  67


Q ss_pred             CEEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhc-----CCCEEEEEeccceeccCCCCCCCCccCCCCCCchh
Q 025755           79 TGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKA-----KVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEE  153 (248)
Q Consensus        79 d~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~-----~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~  153 (248)
                      |+|||+|+........+.+...++.|+.++.++++++++.     ...++++.||.. +++..    ..+++|+++..| 
T Consensus        81 D~Vih~Aa~~~~~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~-~~~~~----~~~~~E~~~~~p-  154 (339)
T d1n7ha_          81 DEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSE-MFGST----PPPQSETTPFHP-  154 (339)
T ss_dssp             SEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGG-GGTTS----CSSBCTTSCCCC-
T ss_pred             chhhhccccccccccccCccccccccccccchhhhhhhhcccccccceeeeecccce-ecccC----CCCCCCCCCCCC-
Confidence            9999999986554333445678899999999999998764     234667666644 33331    456778777655 


Q ss_pred             hhccccchHHHHHHHHHHHHHHHHHhCCccEEEEccCeeecCCCCCCC--CccHHHHHHHHcC-CCCCCCCCchhhhhhh
Q 025755          154 FCKATENYYCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTI--NTSSLLLLGFLKG-FFFTTPSHSYMLERTL  230 (248)
Q Consensus       154 ~~~~~~~~Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~--~~~~~~~~~~~~~-~~l~~~~~~~~~g~~l  230 (248)
                           .+.|+.+|..+|.++..+.++++++++++||+++|||......  ......+.+...+ ......+++....+.+
T Consensus       155 -----~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~rd~~  229 (339)
T d1n7ha_         155 -----RSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWG  229 (339)
T ss_dssp             -----CSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECE
T ss_pred             -----cchhhHHHHHHHHHHHHHHHHhCCCEEEEEEccccCCCCCCCCCcchhhHHHHHHhcCCCCeEEeCCCCccccce
Confidence                 5569999999999999999988899999999999999765431  1122222333333 3333445566677789


Q ss_pred             hhccceeEEEeeccCC
Q 025755          231 VLNQGVRLYRCKIQIP  246 (248)
Q Consensus       231 ~vd~g~~~~~~~~~~p  246 (248)
                      +++|...++..++..+
T Consensus       230 ~v~D~a~~~~~~~~~~  245 (339)
T d1n7ha_         230 FAGDYVEAMWLMLQQE  245 (339)
T ss_dssp             EHHHHHHHHHHHHTSS
T ss_pred             eeehHHHHHHHHHhcC
Confidence            9999887776666544

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=99.96  E-value=3.3e-30  Score=216.01  Aligned_cols=228  Identities=15%  Similarity=0.187  Sum_probs=172.6

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCC-CeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHH-HhCCCCEEEEc
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKG-YMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCA-ATAGCTGVFHV   84 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~-~~~~id~vi~~   84 (248)
                      ||||||||+|+||++++++|+++| ++|+++++..... .    .+. ..+++.++++|+++.+++.+ +.+++|+|||+
T Consensus         1 MKILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~-~----~~~-~~~~~~~i~~Di~~~~~~~~~~~~~~d~Vih~   74 (342)
T d2blla1           1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAI-S----RFL-NHPHFHFVEGDISIHSEWIEYHVKKCDVVLPL   74 (342)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGG-G----GGT-TCTTEEEEECCTTTCSHHHHHHHHHCSEEEEC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcch-h----hhc-cCCCeEEEECccCChHHHHHHHHhCCCccccc
Confidence            479999999999999999999999 5899998765321 1    111 24689999999998766544 66789999999


Q ss_pred             cccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCC-chhhhccccchHH
Q 025755           85 ACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWS-DEEFCKATENYYC  163 (248)
Q Consensus        85 ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~-~~~~~~~~~~~Y~  163 (248)
                      |+..........+...+++|+.|+.++++++.+.+. +++++||...+....    ....+|..+. .+.....|.+.|+
T Consensus        75 a~~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~-~~~~~ss~~~~~~~~----~~~~~~~~~~~~~~~~~~p~~~Y~  149 (342)
T d2blla1          75 VAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRK-RIIFPSTSEVYGMCS----DKYFDEDHSNLIVGPVNKPRWIYS  149 (342)
T ss_dssp             BCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTC-EEEEECCGGGGBTCC----CSSBCTTTCCCBCCCTTCGGGHHH
T ss_pred             cccccccccccCCccccccccccccccccccccccc-ccccccccccccccc----ccccccccccccccccCCCcchhh
Confidence            997654333334467899999999999999999886 667888866444332    3333443332 2233445567799


Q ss_pred             HHHHHHHHHHHHHHHhCCccEEEEccCeeecCCCCCC-------CCccHHHHHHHHcCCCCCCCCCchhhhhhhhhccce
Q 025755          164 LAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPT-------INTSSLLLLGFLKGFFFTTPSHSYMLERTLVLNQGV  236 (248)
Q Consensus       164 ~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~-------~~~~~~~~~~~~~~~~l~~~~~~~~~g~~l~vd~g~  236 (248)
                      .||.++|.++..++++++++++++||+.++||.....       ......++.++..|+.+...+++....+.+|++|.+
T Consensus       150 ~sK~~~E~~~~~~~~~~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~r~~i~v~D~~  229 (342)
T d2blla1         150 VSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGI  229 (342)
T ss_dssp             HHHHHHHHHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHH
T ss_pred             hcccchhhhhhhhhcccCceeEEeeccccccccccccccccccccccchHHHHHHHhCCCccccCCCCeeeeeccccccc
Confidence            9999999999999998889999999999999965442       124567778888888877777777778889999998


Q ss_pred             eEEEeeccC
Q 025755          237 RLYRCKIQI  245 (248)
Q Consensus       237 ~~~~~~~~~  245 (248)
                      .++..+++.
T Consensus       230 ~a~~~~~~~  238 (342)
T d2blla1         230 EALYRIIEN  238 (342)
T ss_dssp             HHHHHHHHC
T ss_pred             ceeeeehhh
Confidence            877766653

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=99.96  E-value=3e-30  Score=208.34  Aligned_cols=212  Identities=12%  Similarity=0.070  Sum_probs=155.2

Q ss_pred             CCCcEEEEEcCcc--HHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-----
Q 025755            4 EDKERVCVTGAGG--YIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-----   76 (248)
Q Consensus         4 l~~k~vlVtG~~g--~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-----   76 (248)
                      |++|++|||||+|  |||+++++.|+++|++|++.+|+..  .....++.....+.......|+.+..++...++     
T Consensus         3 L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (258)
T d1qsga_           3 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDK--LKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKV   80 (258)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTT--THHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTT
T ss_pred             CCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHH--HHHHHHHHHhhcCCcceeecccchHHHHHHHHHHhhhc
Confidence            7999999999998  8999999999999999999999853  222233333334567788899999888777664     


Q ss_pred             --CCCEEEEccccCCCCCCC---------CccccchhhhHHHHHHHHHHHHhc--CCCEEEEEeccceeccCCCCCCCCc
Q 025755           77 --GCTGVFHVACPVPVGKVP---------NPEVQLIDPAVVGTKNVLNSCVKA--KVKRVVVVSSIGAVMLNPNWPKGQV  143 (248)
Q Consensus        77 --~id~vi~~ag~~~~~~~~---------~~~~~~~~~n~~g~~~~~~~~~~~--~~~~iV~vSS~~~~~~~~~~~~~~~  143 (248)
                        .+|++||||+........         +.+...+++|+.+...+.+++.+.  +.+.||++||..+..+.+....   
T Consensus        81 ~~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~iss~~~~~~~~~~~~---  157 (258)
T d1qsga_          81 WPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNV---  157 (258)
T ss_dssp             CSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTTTH---
T ss_pred             ccccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCCcEEEEecchhhccCCCCcHH---
Confidence              479999999876433211         123446688888888888888775  4468999999877666654333   


Q ss_pred             cCCCCCCchhhhccccchHHHHHH----HHHHHHHHHHHhCCccEEEEccCeeecCCCCCCCCc---cHHHHHHHHcCC-
Q 025755          144 MDEECWSDEEFCKATENYYCLAKT----IAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTINT---SSLLLLGFLKGF-  215 (248)
Q Consensus       144 ~~e~~~~~~~~~~~~~~~Y~~sK~----~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~~---~~~~~~~~~~~~-  215 (248)
                                        |+.||+    +++.++.+++++ |||||+|+||.+.+++.......   ......+..-++ 
T Consensus       158 ------------------Y~~sKaal~~ltr~lA~el~~~-gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R~  218 (258)
T d1qsga_         158 ------------------MGLAKASLEANVRYMANAMGPE-GVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRT  218 (258)
T ss_dssp             ------------------HHHHHHHHHHHHHHHHHHHTTT-TEEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSC
T ss_pred             ------------------HHHHHHHHHHHHHHHHHHhCcc-CceeecccccccccccccccchhhhHHHHHHhCCCCCCC
Confidence                              999996    566666666654 59999999999999986542111   111112222222 


Q ss_pred             -----------CCCCCCCchhhhhhhhhccceeEE
Q 025755          216 -----------FFTTPSHSYMLERTLVLNQGVRLY  239 (248)
Q Consensus       216 -----------~l~~~~~~~~~g~~l~vd~g~~~~  239 (248)
                                 ||.++.+.|+||++|.||||+++.
T Consensus       219 ~~peeia~~v~fL~s~~s~~itG~~i~vDGG~~i~  253 (258)
T d1qsga_         219 VTIEDVGNSAAFLCSDLSAGISGEVVHVDGGFSIA  253 (258)
T ss_dssp             CCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGGB
T ss_pred             cCHHHHHHHHHHHhCchhcCccCceEEECcCHHHh
Confidence                       888888999999999999998754

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=99.96  E-value=4.1e-30  Score=212.97  Aligned_cols=211  Identities=17%  Similarity=0.091  Sum_probs=153.4

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC--CCCEEEE
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA--GCTGVFH   83 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~--~id~vi~   83 (248)
                      .|+||||||||+||++++++|+++|+.|+++++..                     ++|+.|.+.+..+++  .+|.|+|
T Consensus         2 kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~---------------------~~~~~~~~~~~~~~~~~~~d~v~~   60 (315)
T d1e6ua_           2 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD---------------------ELNLLDSRAVHDFFASERIDQVYL   60 (315)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT---------------------TCCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCch---------------------hccccCHHHHHHHHhhcCCCEEEE
Confidence            58999999999999999999999999988765432                     168999999988876  5899999


Q ss_pred             ccccCCCCC-CCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccccchH
Q 025755           84 VACPVPVGK-VPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYY  162 (248)
Q Consensus        84 ~ag~~~~~~-~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y  162 (248)
                      +|+...... ......++++.|+.|+.+++++|.+.+++++||+||.++ |+...   ..+++|+.+... .+..+.++|
T Consensus        61 ~a~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~v~~~i~~SS~~v-yg~~~---~~~~~E~~~~~~-~~~~~~~~Y  135 (315)
T d1e6ua_          61 AAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCI-YPKLA---KQPMAESELLQG-TLEPTNEPY  135 (315)
T ss_dssp             CCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGG-SCTTC---CSSBCGGGTTSS-CCCGGGHHH
T ss_pred             cchhccccccchhhHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCceE-cCCCC---CCCccCCccccC-CCCCCCCHH
Confidence            997654321 122335678999999999999999999999999999764 44432   456677654432 222335569


Q ss_pred             HHHHHHHHHHHHHHHHhCCccEEEEccCeeecCCCCCCCC---ccH-----HHHHHHHcCCCCCCCCCchhhhhhhhhcc
Q 025755          163 CLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTIN---TSS-----LLLLGFLKGFFFTTPSHSYMLERTLVLNQ  234 (248)
Q Consensus       163 ~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~---~~~-----~~~~~~~~~~~l~~~~~~~~~g~~l~vd~  234 (248)
                      +.||.++|.++..+.++++++++++||+++|||.+.....   ...     ..+.....+..+....++....+.+++++
T Consensus       136 ~~sK~~~E~~~~~~~~~~gl~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~v~d  215 (315)
T d1e6ua_         136 AIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDD  215 (315)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCCCEEEEeeccEECCCCCCCccccccceeeeccchhhhhccCCceEEcCCCceEEEEEEeeh
Confidence            9999999999999998888999999999999998754311   111     12233344444444444444556677777


Q ss_pred             ceeEEEee
Q 025755          235 GVRLYRCK  242 (248)
Q Consensus       235 g~~~~~~~  242 (248)
                      ...++...
T Consensus       216 ~~~~~~~~  223 (315)
T d1e6ua_         216 MAAASIHV  223 (315)
T ss_dssp             HHHHHHHH
T ss_pred             hHHHHHHh
Confidence            66554443

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.96  E-value=8.8e-29  Score=198.57  Aligned_cols=207  Identities=15%  Similarity=0.130  Sum_probs=145.2

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHH---CCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC------
Q 025755            6 KERVCVTGAGGYIASWLVKYLLL---KGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA------   76 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~---~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~------   76 (248)
                      ||+||||||++|||+++++.|++   +|++|++.+|+.+..+.  ++.+....+++.++.+|++|.++++++++      
T Consensus         2 MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~   79 (248)
T d1snya_           2 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKE--LEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVT   79 (248)
T ss_dssp             CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHH--HHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHH
T ss_pred             cCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHH--HHHHHhcCCcEEEEEEEeccHHHHHHHHhhhHHHh
Confidence            68999999999999999999974   69999999999864432  23333345789999999999988877654      


Q ss_pred             ---CCCEEEEccccCCCCCC-----CCccccchhhhHHHHHHHHHHHHhc---------------CCCEEEEEeccceec
Q 025755           77 ---GCTGVFHVACPVPVGKV-----PNPEVQLIDPAVVGTKNVLNSCVKA---------------KVKRVVVVSSIGAVM  133 (248)
Q Consensus        77 ---~id~vi~~ag~~~~~~~-----~~~~~~~~~~n~~g~~~~~~~~~~~---------------~~~~iV~vSS~~~~~  133 (248)
                         ++|++|||||.......     .++++..+++|+.|+..+.+++.+.               +.+++|++||..+..
T Consensus        80 ~~~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~~  159 (248)
T d1snya_          80 KDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSI  159 (248)
T ss_dssp             GGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCS
T ss_pred             hcCCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhcccccccccccccccccccccccc
Confidence               48999999997654321     2235678999999988887776432               357999999976543


Q ss_pred             cCCCCCCCCccCCCCCCchhhhccccchHHHHHH----HHHHHHHHHHHhCCccEEEEccCeeecCCCCCCCCcc-HHHH
Q 025755          134 LNPNWPKGQVMDEECWSDEEFCKATENYYCLAKT----IAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTINTS-SLLL  208 (248)
Q Consensus       134 ~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~----~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~~~-~~~~  208 (248)
                      .....+.                  ...|+.||+    +++.++.++.++ ||+|++|+||++.+++.....+.. +...
T Consensus       160 ~~~~~~~------------------~~~Y~aSKaal~~lt~~la~e~~~~-gI~vn~v~PG~v~T~m~~~~~~~~~~~~~  220 (248)
T d1snya_         160 QGNTDGG------------------MYAYRTSKSALNAATKSLSVDLYPQ-RIMCVSLHPGWVKTDMGGSSAPLDVPTST  220 (248)
T ss_dssp             TTCCSCC------------------CHHHHHHHHHHHHHHHHHHHHHGGG-TCEEEEECCCSBCSTTTCTTCSBCHHHHH
T ss_pred             CCCCCCC------------------hHHHHHHHHHHHHHHHHHHHHhCCC-CeEEEEcCCCcccCCcccccCCCCchHHH
Confidence            3211111                  234999995    667777777665 499999999999999876543222 2222


Q ss_pred             HHHHcCCCCCCCCCchhhhhhhhhccce
Q 025755          209 LGFLKGFFFTTPSHSYMLERTLVLNQGV  236 (248)
Q Consensus       209 ~~~~~~~~l~~~~~~~~~g~~l~vd~g~  236 (248)
                      ..+..  .+. ......+|+++.+||..
T Consensus       221 ~~i~~--~i~-~l~~~~tG~~i~~dG~~  245 (248)
T d1snya_         221 GQIVQ--TIS-KLGEKQNGGFVNYDGTP  245 (248)
T ss_dssp             HHHHH--HHH-HCCGGGTTCEECTTSCB
T ss_pred             HHHHH--HHH-hcCccCCCcEEEECCeE
Confidence            22221  111 11234578888888864

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=1.2e-28  Score=197.79  Aligned_cols=171  Identities=17%  Similarity=0.134  Sum_probs=131.7

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC------
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA------   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~------   76 (248)
                      +|+||++|||||++|||++++++|+++|++|++++|+.++.. ...+++   ..+.....+|+.+.++++....      
T Consensus         2 slkGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~-~~~~~l---~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (248)
T d2o23a1           2 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGE-AQAKKL---GNNCVFAPADVTSEKDVQTALALAKGKF   77 (248)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHH-HHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHH-HHHHHh---CCCccccccccccccccccccccccccc
Confidence            589999999999999999999999999999999999875433 333333   3578888999999877666543      


Q ss_pred             -CCCEEEEccccCCCCCC----------CCccccchhhhHHHHHHHHHHHHhc----------CCCEEEEEeccceeccC
Q 025755           77 -GCTGVFHVACPVPVGKV----------PNPEVQLIDPAVVGTKNVLNSCVKA----------KVKRVVVVSSIGAVMLN  135 (248)
Q Consensus        77 -~id~vi~~ag~~~~~~~----------~~~~~~~~~~n~~g~~~~~~~~~~~----------~~~~iV~vSS~~~~~~~  135 (248)
                       ..|.++++++.......          .+.|+.++++|+.++.++.+++.+.          +.++||++||..+..+.
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~  157 (248)
T d2o23a1          78 GRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQ  157 (248)
T ss_dssp             SCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCC
T ss_pred             ccccccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhccCC
Confidence             57999988876543211          2345678999999999999888553          44699999999887776


Q ss_pred             CCCCCCCccCCCCCCchhhhccccchHHHHHH----HHHHHHHHHHHhCCccEEEEccCeeecCCCCC
Q 025755          136 PNWPKGQVMDEECWSDEEFCKATENYYCLAKT----IAEIQALEYAKRGELDIVTVCPSIVIGPMLQP  199 (248)
Q Consensus       136 ~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~----~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~  199 (248)
                      ++...                     |+.||+    +++.++.+++++ |||||+|+||.+.+++...
T Consensus       158 ~~~~~---------------------Y~asKaal~~lt~~la~e~~~~-gIrvN~I~PG~i~T~~~~~  203 (248)
T d2o23a1         158 VGQAA---------------------YSASKGGIVGMTLPIARDLAPI-GIRVMTIAPGLFGTPLLTS  203 (248)
T ss_dssp             TTCHH---------------------HHHHHHHHHHHHHHHHHHHGGG-TEEEEEEEECCBCCC----
T ss_pred             CCchH---------------------HHHHHHHHHHHHHHHHHHhccc-CcceeeeccCceecchhhc
Confidence            65444                     999996    666677777765 4999999999999997654

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=99.95  E-value=2.3e-28  Score=199.77  Aligned_cols=207  Identities=15%  Similarity=0.145  Sum_probs=142.8

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCC-CCCe-----------------EEEEccCCC
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGA-SENL-----------------QLFKTDLLD   67 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~-----------------~~~~~Di~d   67 (248)
                      +.++|||||++|||+++++.|+++|++|++.+++..+..+...+.+... ....                 ..+.+|+++
T Consensus         2 ~pVAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~   81 (284)
T d1e7wa_           2 VPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTL   81 (284)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCCC
Confidence            4589999999999999999999999999999887644333333333221 2223                 344567888


Q ss_pred             HHHHHHHhC-------CCCEEEEccccCCCCCCC----Ccc--------------ccchhhhHHHHHHHHHHHHhc----
Q 025755           68 YEALCAATA-------GCTGVFHVACPVPVGKVP----NPE--------------VQLIDPAVVGTKNVLNSCVKA----  118 (248)
Q Consensus        68 ~~~~~~~~~-------~id~vi~~ag~~~~~~~~----~~~--------------~~~~~~n~~g~~~~~~~~~~~----  118 (248)
                      .++++++++       ++|++|||||........    +.+              ..++.+|+.++..+.+++.+.    
T Consensus        82 ~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~  161 (284)
T d1e7wa_          82 FTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGT  161 (284)
T ss_dssp             HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHHHhCCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhhh
Confidence            888888764       689999999986544221    111              135788999998888876431    


Q ss_pred             ------CCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccccchHHHHHH----HHHHHHHHHHHhCCccEEEEc
Q 025755          119 ------KVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAKT----IAEIQALEYAKRGELDIVTVC  188 (248)
Q Consensus       119 ------~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~----~~e~l~~~~~~~~~i~v~~vr  188 (248)
                            +.++||+++|.....+.+...                     .|+.||+    +++.++.++++++ ||||+|+
T Consensus       162 ~~~~~~~~~~ii~~~s~~~~~~~~~~~---------------------~Y~asKaal~~lt~~lA~el~~~g-IrvN~I~  219 (284)
T d1e7wa_         162 PAKHRGTNYSIINMVDAMTNQPLLGYT---------------------IYTMAKGALEGLTRSAALELAPLQ-IRVNGVG  219 (284)
T ss_dssp             CGGGSCSCEEEEEECCTTTTSCCTTCH---------------------HHHHHHHHHHHHHHHHHHHHGGGT-EEEEEEE
T ss_pred             HHHhcCCCCcccccccccccCCcccee---------------------eeccccccchhhhHHHHHHhCCcc-ccccccc
Confidence                  346899998877655554432                     3999995    7777777777654 9999999


Q ss_pred             cCeeecCCCCCCCCccHHHHHHHHc-----CC------------CCCCCCCchhhhhhhhhccceeEE
Q 025755          189 PSIVIGPMLQPTINTSSLLLLGFLK-----GF------------FFTTPSHSYMLERTLVLNQGVRLY  239 (248)
Q Consensus       189 pg~i~g~~~~~~~~~~~~~~~~~~~-----~~------------~l~~~~~~~~~g~~l~vd~g~~~~  239 (248)
                      ||.+......+     ....+....     ++            ||.++.+.|+||++|.||||+++.
T Consensus       220 PG~t~~~~~~~-----~~~~~~~~~~~pl~~R~~~peeiA~~v~fL~S~~s~~itG~~i~VDGG~sl~  282 (284)
T d1e7wa_         220 PGLSVLVDDMP-----PAVWEGHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSLT  282 (284)
T ss_dssp             ESSBCCGGGSC-----HHHHHHHHTTCTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             cccccccccCC-----HHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhCchhcCccCCeEEECcChhcc
Confidence            99754433221     122222211     22            788889999999999999998754

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.95  E-value=8.8e-29  Score=203.54  Aligned_cols=224  Identities=11%  Similarity=0.054  Sum_probs=150.0

Q ss_pred             CCCCcEEEEEcCcc--HHHHHHHHHHHHCCCeEEEEEcCCCchhhHH-hhh-------hcC--CCCCe-EEEEccC----
Q 025755            3 GEDKERVCVTGAGG--YIASWLVKYLLLKGYMVHGTVRDPCDEKNAH-LKK-------LEG--ASENL-QLFKTDL----   65 (248)
Q Consensus         3 ~l~~k~vlVtG~~g--~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~-~~~-------~~~--~~~~~-~~~~~Di----   65 (248)
                      +|++|++|||||+|  |||++++++|+++|++|++.+|+........ ...       ...  ..... ....+|.    
T Consensus         5 ~L~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (297)
T d1d7oa_           5 DLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFDN   84 (297)
T ss_dssp             CCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCCS
T ss_pred             CCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhhccc
Confidence            48999999999876  9999999999999999999998642111110 000       000  01111 2222331    


Q ss_pred             ----------------CCHH-------HHHHHhCCCCEEEEccccCCCC------CCCCccccchhhhHHHHHHHHHHHH
Q 025755           66 ----------------LDYE-------ALCAATAGCTGVFHVACPVPVG------KVPNPEVQLIDPAVVGTKNVLNSCV  116 (248)
Q Consensus        66 ----------------~d~~-------~~~~~~~~id~vi~~ag~~~~~------~~~~~~~~~~~~n~~g~~~~~~~~~  116 (248)
                                      .+..       .+.+.+.++|++|||||.....      ...+.|...+++|+.+..++++++.
T Consensus        85 ~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~  164 (297)
T d1d7oa_          85 PEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFL  164 (297)
T ss_dssp             GGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHG
T ss_pred             cccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhhhhhhhhhHHH
Confidence                            1111       2222345799999999975321      1123467789999999999999987


Q ss_pred             hc--CCCEEEEEeccceeccC-CCCCCCCccCCCCCCchhhhccccchHHHHHH----HHHHHHHHHHHhCCccEEEEcc
Q 025755          117 KA--KVKRVVVVSSIGAVMLN-PNWPKGQVMDEECWSDEEFCKATENYYCLAKT----IAEIQALEYAKRGELDIVTVCP  189 (248)
Q Consensus       117 ~~--~~~~iV~vSS~~~~~~~-~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~----~~e~l~~~~~~~~~i~v~~vrp  189 (248)
                      +.  ..++++.+++....... +..                     ..|+.+|+    +++.++.+++.++|||||+|+|
T Consensus       165 ~~~~~~g~~~~~~~~~~~~~~~~~~---------------------~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~P  223 (297)
T d1d7oa_         165 PIMNPGGASISLTYIASERIIPGYG---------------------GGMSSAKAALESDTRVLAFEAGRKQNIRVNTISA  223 (297)
T ss_dssp             GGEEEEEEEEEEECGGGTSCCTTCT---------------------TTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEE
T ss_pred             HHhhcCCcceeeeehhhcccccccc---------------------cceecccccccccccccchhccccceEEeccccc
Confidence            76  33567777765543322 211                     23999995    6666777777555699999999


Q ss_pred             CeeecCCCCCCCCccHHHHHHHH----cCC------------CCCCCCCchhhhhhhhhccceeEEEeeccCCCC
Q 025755          190 SIVIGPMLQPTINTSSLLLLGFL----KGF------------FFTTPSHSYMLERTLVLNQGVRLYRCKIQIPTL  248 (248)
Q Consensus       190 g~i~g~~~~~~~~~~~~~~~~~~----~~~------------~l~~~~~~~~~g~~l~vd~g~~~~~~~~~~p~~  248 (248)
                      |.+.+++..... ....+.+...    -++            ||.++.+.|+|||+|.||||++++..++.+|.+
T Consensus       224 G~i~T~~~~~~~-~~~~~~~~~~~~~PlgR~~~peevA~~v~fL~S~~a~~itGq~i~vDGG~s~~G~~~~~~~~  297 (297)
T d1d7oa_         224 GPLGSRAAKAIG-FIDTMIEYSYNNAPIQKTLTADEVGNAAAFLVSPLASAITGATIYVDNGLNSMGVALDSPVF  297 (297)
T ss_dssp             CCCBCCCSSCCS-HHHHHHHHHHHHSSSCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGGCSSCTTCTTC
T ss_pred             ccccchhhhhcc-CCHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCchhcCCcCceEEECcCHhhcCCCCCCCCC
Confidence            999999876431 1122222221    122            888999999999999999999999999999863

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.95  E-value=1.2e-28  Score=199.03  Aligned_cols=173  Identities=16%  Similarity=0.100  Sum_probs=134.0

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHH---CCCeEEEEEcCCCchhhHHhhhhcC--CCCCeEEEEccCCCHHHHHHHhC-
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLL---KGYMVHGTVRDPCDEKNAHLKKLEG--ASENLQLFKTDLLDYEALCAATA-   76 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~---~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~Di~d~~~~~~~~~-   76 (248)
                      .|++|+++||||++|||++++++|++   +|++|++++|+.+. .+...+++..  ...++.++.+|++|+++++++++ 
T Consensus         3 ~L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~-l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~   81 (259)
T d1oaaa_           3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESM-LRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSA   81 (259)
T ss_dssp             CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHH-HHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHH-HHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHH
Confidence            48899999999999999999999986   79999999998743 2333333322  24578899999999999888763 


Q ss_pred             ----------CCCEEEEccccCCCCC-------CCCccccchhhhHHHHHHHHHHHHhc----C--CCEEEEEeccceec
Q 025755           77 ----------GCTGVFHVACPVPVGK-------VPNPEVQLIDPAVVGTKNVLNSCVKA----K--VKRVVVVSSIGAVM  133 (248)
Q Consensus        77 ----------~id~vi~~ag~~~~~~-------~~~~~~~~~~~n~~g~~~~~~~~~~~----~--~~~iV~vSS~~~~~  133 (248)
                                .+|++|||||......       ..+.|..++++|+.++..+.+++.+.    +  .++||++||..+..
T Consensus        82 ~~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~~  161 (259)
T d1oaaa_          82 VRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQ  161 (259)
T ss_dssp             HHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTS
T ss_pred             HHHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCcccccccccccccC
Confidence                      3579999999754221       11346678999999999999888765    2  36999999988877


Q ss_pred             cCCCCCCCCccCCCCCCchhhhccccchHHHHHHHHHHHHHHHHHh-CCccEEEEccCeeecCCC
Q 025755          134 LNPNWPKGQVMDEECWSDEEFCKATENYYCLAKTIAEIQALEYAKR-GELDIVTVCPSIVIGPML  197 (248)
Q Consensus       134 ~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~-~~i~v~~vrpg~i~g~~~  197 (248)
                      +.+.+..                     |+.||+..+.+.+.++.+ .|||||+|+||.+.+++.
T Consensus       162 ~~~~~~~---------------------Y~asKaal~~lt~~la~e~~gIrVn~v~PG~i~T~~~  205 (259)
T d1oaaa_         162 PYKGWGL---------------------YCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDNDMQ  205 (259)
T ss_dssp             CCTTCHH---------------------HHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSHHH
T ss_pred             CCccchH---------------------HHHHHHHHHHHHHHHHhCCCCCEEEEEEcCCCCCHHH
Confidence            7665433                     999998666666666543 479999999999999864

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=99.95  E-value=9.1e-29  Score=206.12  Aligned_cols=236  Identities=18%  Similarity=0.137  Sum_probs=171.4

Q ss_pred             EEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCC--CCEEEEcc
Q 025755            8 RVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAG--CTGVFHVA   85 (248)
Q Consensus         8 ~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~--id~vi~~a   85 (248)
                      |||||||+||||++++++|+++|++|+++++-...........+. ..+++.++++|++|.+++.+++++  +|+|||+|
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~-~~~~~~~i~~Di~~~~~l~~~~~~~~~d~Vih~a   80 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLS-SLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHLA   80 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHH-TTCCCEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhh-ccCCcEEEEcccCCHHHHHHHHHhcCCceEEeec
Confidence            799999999999999999999999999987533222333333332 246899999999999999999874  69999999


Q ss_pred             ccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCC-------CCCchhhhccc
Q 025755           86 CPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEE-------CWSDEEFCKAT  158 (248)
Q Consensus        86 g~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~-------~~~~~~~~~~~  158 (248)
                      +..........+..++++|+.|+.++++++.+.+..++|++||...+++.+........++.       .........++
T Consensus        81 a~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~i~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (338)
T d1orra_          81 GQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDF  160 (338)
T ss_dssp             CCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTSCCCC
T ss_pred             ccccccccccChHHHHHHHHHHHHHHHHhhhcccccccccccccccccccccccccccccccccccccccCcccCCcccc
Confidence            98665333334478899999999999999999988888888887777665432110000000       11112233456


Q ss_pred             cchHHHHHHHHHHHHHHHHHhCCccEEEEccCeeecCCCCCC--CCccHHHHHHHHc-----CCCCCCCCCchhhhhhhh
Q 025755          159 ENYYCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPT--INTSSLLLLGFLK-----GFFFTTPSHSYMLERTLV  231 (248)
Q Consensus       159 ~~~Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~--~~~~~~~~~~~~~-----~~~l~~~~~~~~~g~~l~  231 (248)
                      .+.|+.+|...|.++..+...++.....++|..+|++.....  ......++..+..     ++.+...+++....+.++
T Consensus       161 ~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~r~~~~  240 (338)
T d1orra_         161 HSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRDVLH  240 (338)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSSCCEEECEE
T ss_pred             ccccccccchhhhhhhhhhhccCcccccccccceeeccccccccccccchhhHHHHHHHhccCCceEEeCCCceeEeeec
Confidence            678999999999999999988889999999999998776543  2333455554433     445555566666677889


Q ss_pred             hccceeEEEeecc
Q 025755          232 LNQGVRLYRCKIQ  244 (248)
Q Consensus       232 vd~g~~~~~~~~~  244 (248)
                      ++|.+.++..+++
T Consensus       241 v~D~~~~~~~~l~  253 (338)
T d1orra_         241 AEDMISLYFTALA  253 (338)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             ccchhhHHHHHHh
Confidence            9998877766554

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=3.1e-28  Score=198.22  Aligned_cols=224  Identities=19%  Similarity=0.113  Sum_probs=149.8

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHC-CCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-------CC
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLK-GYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-------GC   78 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-------~i   78 (248)
                      +++|||||++|||++++++|+++ |++|++.+|+.++ .+...+++.....++.++++|++|.++++++++       ++
T Consensus         4 rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~-~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g~i   82 (275)
T d1wmaa1           4 HVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTR-GQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGGL   82 (275)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHH-HHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSSE
T ss_pred             eEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHH-HHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhcCCc
Confidence            45599999999999999999985 8999999998753 344455555556789999999999999888765       58


Q ss_pred             CEEEEccccCCCCCCC----CccccchhhhHHHHHHHHHHHHhc--CCCEEEEEeccceeccCCCCCCC-------CccC
Q 025755           79 TGVFHVACPVPVGKVP----NPEVQLIDPAVVGTKNVLNSCVKA--KVKRVVVVSSIGAVMLNPNWPKG-------QVMD  145 (248)
Q Consensus        79 d~vi~~ag~~~~~~~~----~~~~~~~~~n~~g~~~~~~~~~~~--~~~~iV~vSS~~~~~~~~~~~~~-------~~~~  145 (248)
                      |++|||||+.......    ++++..+++|+.|+..+++.+.+.  ..++||++||..+..+.+...+.       ....
T Consensus        83 DiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS~~~~~~~~~~~~y~~~k~~~~~~~  162 (275)
T d1wmaa1          83 DVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSETIT  162 (275)
T ss_dssp             EEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHHHCSSCC
T ss_pred             EEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccceeccccccchhhhhhhcccccc
Confidence            9999999987654332    234568999999999999999875  34799999997765543221100       0000


Q ss_pred             CCC-------------CCchhhhccccchHHHHHH----HHHHHHHHHHHhC---CccEEEEccCeeecCCCCCCCCccH
Q 025755          146 EEC-------------WSDEEFCKATENYYCLAKT----IAEIQALEYAKRG---ELDIVTVCPSIVIGPMLQPTINTSS  205 (248)
Q Consensus       146 e~~-------------~~~~~~~~~~~~~Y~~sK~----~~e~l~~~~~~~~---~i~v~~vrpg~i~g~~~~~~~~~~~  205 (248)
                      +..             .........+...|+.||+    +++.++++++++.   +|+||+|+||++.+++..+.....+
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v~T~m~~~~~~~~p  242 (275)
T d1wmaa1         163 EEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGPKATKSP  242 (275)
T ss_dssp             HHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCTTCSBCH
T ss_pred             hhhhccccccchhcccccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecccccCCcccCcccCCH
Confidence            000             0000001122345999996    5666677777652   6999999999999998776533333


Q ss_pred             HHHHHHHcCCCCCCCCCchhhhhhhh
Q 025755          206 LLLLGFLKGFFFTTPSHSYMLERTLV  231 (248)
Q Consensus       206 ~~~~~~~~~~~l~~~~~~~~~g~~l~  231 (248)
                      .......-......+...+.+|+.+.
T Consensus       243 ee~A~~~~~~a~~~~~~~~~~G~~~~  268 (275)
T d1wmaa1         243 EEGAETPVYLALLPPDAEGPHGQFVS  268 (275)
T ss_dssp             HHHTHHHHHHHSCCTTCCCCCSCEEE
T ss_pred             HHHHHHHHHHHcCChhhcCCCeEEEE
Confidence            32222111001123344566776553

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=9.3e-28  Score=196.11  Aligned_cols=172  Identities=20%  Similarity=0.206  Sum_probs=130.3

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCCeEEEEE---cCCCch--hhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC----
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGYMVHGTV---RDPCDE--KNAHLKKLEGASENLQLFKTDLLDYEALCAATA----   76 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~---r~~~~~--~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~----   76 (248)
                      .|+||||||++|||+++++.|+++|++|+.+.   |+.+..  ..+..+.+.....++..+.+|++|.++++++++    
T Consensus         2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~   81 (285)
T d1jtva_           2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE   81 (285)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT
T ss_pred             CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhccc
Confidence            57889999999999999999999998866554   333211  122333444556789999999999999998875    


Q ss_pred             -CCCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHH----hcCCCEEEEEeccceeccCCCCCCCCccCCC
Q 025755           77 -GCTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCV----KAKVKRVVVVSSIGAVMLNPNWPKGQVMDEE  147 (248)
Q Consensus        77 -~id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~----~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~  147 (248)
                       .+|++|||||.......    .+.|+..+++|+.|+.++.+++.    +.+.++||++||..+..+.+....       
T Consensus        82 g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g~~~~~~~~~-------  154 (285)
T d1jtva_          82 GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDV-------  154 (285)
T ss_dssp             SCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCTTCHH-------
T ss_pred             cchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhhcCCCCCchH-------
Confidence             47999999998765432    34567789999999877777654    457789999999988877765333       


Q ss_pred             CCCchhhhccccchHHHHHH----HHHHHHHHHHHhCCccEEEEccCeeecCCCCC
Q 025755          148 CWSDEEFCKATENYYCLAKT----IAEIQALEYAKRGELDIVTVCPSIVIGPMLQP  199 (248)
Q Consensus       148 ~~~~~~~~~~~~~~Y~~sK~----~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~  199 (248)
                                    |+.||+    +++.++.+++++ |||||+|+||.+.+++...
T Consensus       155 --------------Y~asKaal~~l~~~la~El~~~-gIrVn~V~PG~v~T~~~~~  195 (285)
T d1jtva_         155 --------------YCASKFALEGLCESLAVLLLPF-GVHLSLIECGPVHTAFMEK  195 (285)
T ss_dssp             --------------HHHHHHHHHHHHHHHHHHHGGG-TEEEEEEEECCBCC-----
T ss_pred             --------------HHHHHHHHHHHHHHHHHHhhcc-CcEEEEEecCCCCChHHHH
Confidence                          999995    777777777765 4999999999999987643

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=99.95  E-value=3.6e-28  Score=197.70  Aligned_cols=212  Identities=10%  Similarity=0.076  Sum_probs=142.0

Q ss_pred             CCCcEEEEEcCcc--HHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-----
Q 025755            4 EDKERVCVTGAGG--YIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-----   76 (248)
Q Consensus         4 l~~k~vlVtG~~g--~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-----   76 (248)
                      |++|++|||||+|  |||+++++.|+++|++|++++|+..  .....+++........++.+|+++.+++++++.     
T Consensus         3 L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~--~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~   80 (274)
T d2pd4a1           3 LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES--LEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKD   80 (274)
T ss_dssp             TTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT--THHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHH--HHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHHH
Confidence            8999999999876  8999999999999999999999853  223344444445667788999999988877764     


Q ss_pred             --CCCEEEEccccCCCCCCCC----ccccc----hhhhHHHHHHHHHHHHhc-CC-CEEEEEeccceeccCCCCCCCCcc
Q 025755           77 --GCTGVFHVACPVPVGKVPN----PEVQL----IDPAVVGTKNVLNSCVKA-KV-KRVVVVSSIGAVMLNPNWPKGQVM  144 (248)
Q Consensus        77 --~id~vi~~ag~~~~~~~~~----~~~~~----~~~n~~g~~~~~~~~~~~-~~-~~iV~vSS~~~~~~~~~~~~~~~~  144 (248)
                        .+|++|||+|.........    ..+..    ...+..+...+...+.+. +. ..|+++||.+...+.+.       
T Consensus        81 ~g~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~~~~-------  153 (274)
T d2pd4a1          81 LGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYMAH-------  153 (274)
T ss_dssp             TSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTT-------
T ss_pred             cCCCCeEEeecccccccccccccccccchhhhhhhccccccccccccccccccccCcceeeeccccccccccc-------
Confidence              5899999999765432111    11222    233333344455554443 22 34555555443333322       


Q ss_pred             CCCCCCchhhhccccchHHHHHH----HHHHHHHHHHHhCCccEEEEccCeeecCCCCCCCCcc--HHHH-HHHHcCC--
Q 025755          145 DEECWSDEEFCKATENYYCLAKT----IAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTINTS--SLLL-LGFLKGF--  215 (248)
Q Consensus       145 ~e~~~~~~~~~~~~~~~Y~~sK~----~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~~~--~~~~-~~~~~~~--  215 (248)
                                    ..+|+.+|.    +++.++.+++++ |||||+|+||.+.+++........  .... .....++  
T Consensus       154 --------------~~~y~asK~al~~ltr~lA~e~~~~-GIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~  218 (274)
T d2pd4a1         154 --------------YNVMGLAKAALESAVRYLAVDLGKH-HIRVNALSAGPIRTLASSGIADFRMILKWNEINAPLRKNV  218 (274)
T ss_dssp             --------------CHHHHHHHHHHHHHHHHHHHHHHTT-TCEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCC
T ss_pred             --------------chhhhHHHHHHHHHHHhhHHHhcCc-CceecccccCcccCccccccCchHHHHHHHhhhhhccCCc
Confidence                          234999995    566667777765 499999999999998765431111  1111 1111111  


Q ss_pred             ----------CCCCCCCchhhhhhhhhccceeEE
Q 025755          216 ----------FFTTPSHSYMLERTLVLNQGVRLY  239 (248)
Q Consensus       216 ----------~l~~~~~~~~~g~~l~vd~g~~~~  239 (248)
                                ||.++.+.|+||++|.||||+++.
T Consensus       219 ~pedIA~~v~fL~S~~s~~itG~~i~vDGG~~~~  252 (274)
T d2pd4a1         219 SLEEVGNAGMYLLSSLSSGVSGEVHFVDAGYHVM  252 (274)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGB
T ss_pred             CHHHHHHHHHHHhChhhCCCcCceEEECCChhhc
Confidence                      888999999999999999999754

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=99.95  E-value=7.7e-28  Score=202.25  Aligned_cols=227  Identities=19%  Similarity=0.108  Sum_probs=161.8

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC--CCCEEE
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA--GCTGVF   82 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~--~id~vi   82 (248)
                      ++|+||||||+||||++++++|+++|++|++++|+...... ..+ .....+.++++.+|++|.+.+.++++  .+|+|+
T Consensus         7 ~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~-~~~-~~~~~~~i~~~~~Dl~d~~~l~~~~~~~~~~~v~   84 (356)
T d1rkxa_           7 QGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPS-LFE-TARVADGMQSEIGDIRDQNKLLESIREFQPEIVF   84 (356)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSC-HHH-HTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHH-HHh-hhhcccCCeEEEeeccChHhhhhhhhhchhhhhh
Confidence            78999999999999999999999999999999997653222 111 11224579999999999999999887  579999


Q ss_pred             EccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccccchH
Q 025755           83 HVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYY  162 (248)
Q Consensus        83 ~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y  162 (248)
                      |+|+........+.+..++++|+.|+.++++++.+.+..++++.||....+....  ...+.+|+++..|      .++|
T Consensus        85 ~~aa~~~~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~~~~~~~~s~~~~~~~~~--~~~~~~~~~~~~p------~~~y  156 (356)
T d1rkxa_          85 HMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKE--WIWGYRENEAMGG------YDPY  156 (356)
T ss_dssp             ECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCC--SSSCBCTTSCBCC------SSHH
T ss_pred             hhhccccccccccCCccccccccccchhhhhhhhccccccccccccccccccccc--cccccccccccCC------CCcc
Confidence            9998765433334557789999999999999999986555555545444443322  1344555554443      4559


Q ss_pred             HHHHHHHHHHHHHHHHh---------CCccEEEEccCeeecCCCCCCCCccHHHHHHHHcCCCCCCCCCchhhhhhhhhc
Q 025755          163 CLAKTIAEIQALEYAKR---------GELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKGFFFTTPSHSYMLERTLVLN  233 (248)
Q Consensus       163 ~~sK~~~e~l~~~~~~~---------~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~l~vd  233 (248)
                      +.+|...|..+..++.+         +++.+.++||+.+|||.+.......+.++.....+... ...........++++
T Consensus       157 ~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~v~  235 (356)
T d1rkxa_         157 SNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPV-IIRNPHAIRPWQHVL  235 (356)
T ss_dssp             HHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCE-ECSCTTCEECCEETH
T ss_pred             ccccccchhhhhHHhhhcccchhccccCceEEeccCCCeeCCCcchhhHHHHHHHHHHhCCCce-EEeeccccccccccc
Confidence            99999998888776642         35889999999999998765544555566665554433 344444444567777


Q ss_pred             cceeEEEee
Q 025755          234 QGVRLYRCK  242 (248)
Q Consensus       234 ~g~~~~~~~  242 (248)
                      +...++..+
T Consensus       236 D~~~a~~~~  244 (356)
T d1rkxa_         236 EPLSGYLLL  244 (356)
T ss_dssp             HHHHHHHHH
T ss_pred             cccchhhhh
Confidence            766554433

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=99.95  E-value=3.6e-28  Score=193.98  Aligned_cols=192  Identities=20%  Similarity=0.161  Sum_probs=140.4

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC------CCC
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA------GCT   79 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~------~id   79 (248)
                      .|++|||||++|||+++++.|+++|++|++++|+.+             ..+....++|+.+......+..      ..+
T Consensus         1 DK~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~-------------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~   67 (241)
T d1uaya_           1 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-------------GEDLIYVEGDVTREEDVRRAVARAQEEAPLF   67 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-------------SSSSEEEECCTTCHHHHHHHHHHHHHHSCEE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcc-------------cccceEeeccccchhhhHHHHHhhhcccccc
Confidence            489999999999999999999999999999999864             2356678899998877666654      345


Q ss_pred             EEEEccccCCCCCC--------CCccccchhhhHHHHHHHHHHHHh----------cCCCEEEEEeccceeccCCCCCCC
Q 025755           80 GVFHVACPVPVGKV--------PNPEVQLIDPAVVGTKNVLNSCVK----------AKVKRVVVVSSIGAVMLNPNWPKG  141 (248)
Q Consensus        80 ~vi~~ag~~~~~~~--------~~~~~~~~~~n~~g~~~~~~~~~~----------~~~~~iV~vSS~~~~~~~~~~~~~  141 (248)
                      .++++++.......        .+.+...+++|+.+...+.+.+..          .+.++||++||..+..+.+.... 
T Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~~~~~-  146 (241)
T d1uaya_          68 AVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAA-  146 (241)
T ss_dssp             EEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTTCHH-
T ss_pred             chhhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhccCCCCchh-
Confidence            66666664332211        123456789999998877776543          24579999999988877765444 


Q ss_pred             CccCCCCCCchhhhccccchHHHHHH----HHHHHHHHHHHhCCccEEEEccCeeecCCCCCCCCccHHHHHHHHc----
Q 025755          142 QVMDEECWSDEEFCKATENYYCLAKT----IAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLK----  213 (248)
Q Consensus       142 ~~~~e~~~~~~~~~~~~~~~Y~~sK~----~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~----  213 (248)
                                          |+.+|+    +++.++.++++++ ||||+|+||.+.+++.....   .........    
T Consensus       147 --------------------Y~asKaal~~lt~~lA~ela~~g-IrVN~V~PG~i~T~~~~~~~---~~~~~~~~~~~~~  202 (241)
T d1uaya_         147 --------------------YAASKGGVVALTLPAARELAGWG-IRVVTVAPGLFDTPLLQGLP---EKAKASLAAQVPF  202 (241)
T ss_dssp             --------------------HHHHHHHHHHHHHHHHHHHGGGT-EEEEEEEECSCSSHHHHTSC---HHHHHHHHTTCCS
T ss_pred             --------------------hHHHHHHHHHHHHHHHHHHhhcC-CceeeecCCcccccccchhh---hhHHHHHHhcCCC
Confidence                                999995    7777777777654 99999999999998654321   111111111    


Q ss_pred             -CC------------CCCCCCCchhhhhhhhhcccee
Q 025755          214 -GF------------FFTTPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       214 -~~------------~l~~~~~~~~~g~~l~vd~g~~  237 (248)
                       ++            ||.+  +.|+||++|.||||++
T Consensus       203 ~~R~g~pedvA~~v~fL~s--~~~iTG~~i~VDGG~~  237 (241)
T d1uaya_         203 PPRLGRPEEYAALVLHILE--NPMLNGEVVRLDGALR  237 (241)
T ss_dssp             SCSCCCHHHHHHHHHHHHH--CTTCCSCEEEESTTCC
T ss_pred             CCCCcCHHHHHHHHHHHHh--CCCCCCCEEEECCccc
Confidence             11            5554  5799999999999986

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=99.95  E-value=3.2e-27  Score=200.67  Aligned_cols=192  Identities=22%  Similarity=0.167  Sum_probs=144.6

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHH-CCCeEEEEEcCC--------CchhhHHhhhh--------cCCCCCeEEEEccCCCH
Q 025755            6 KERVCVTGAGGYIASWLVKYLLL-KGYMVHGTVRDP--------CDEKNAHLKKL--------EGASENLQLFKTDLLDY   68 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~-~g~~V~~~~r~~--------~~~~~~~~~~~--------~~~~~~~~~~~~Di~d~   68 (248)
                      .|+||||||+||||++++++|++ .|++|+++++-.        .+........+        ......+.++.+|++|.
T Consensus         2 ~MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~   81 (383)
T d1gy8a_           2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (383)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCH
Confidence            46999999999999999999996 689999987411        00011111111        01134588999999999


Q ss_pred             HHHHHHhC---CCCEEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccC
Q 025755           69 EALCAATA---GCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMD  145 (248)
Q Consensus        69 ~~~~~~~~---~id~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~  145 (248)
                      +.++++++   .+|+|||+|+..............++.|+.++.++++++++.+.++++++||...+.....   .....
T Consensus        82 ~~l~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~N~~~t~~~l~~~~~~~~~~~~~~~s~~~~~~~~~---~~~~~  158 (383)
T d1gy8a_          82 DFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTM---GSVST  158 (383)
T ss_dssp             HHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSCCC--------
T ss_pred             HHhhhhhhccceeehhhcccccccccccccccccccccccccccccchhhhccCCccccccccccccccccc---ccccc
Confidence            99999885   5799999999766543334446788999999999999999999999999998664433221   23334


Q ss_pred             CCCCCchhhhccccchHHHHHHHHHHHHHHHHHhCCccEEEEccCeeecCCCCCC
Q 025755          146 EECWSDEEFCKATENYYCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPT  200 (248)
Q Consensus       146 e~~~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~  200 (248)
                      +..+..++....|.+.|+.+|..+|.++..+.+.++++++++||+++|||.+...
T Consensus       159 ~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~gl~~~~lR~~~vyG~~~~~~  213 (383)
T d1gy8a_         159 NAEPIDINAKKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGD  213 (383)
T ss_dssp             CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSS
T ss_pred             cccccccccCCCCCCHHHhhHhHHHHHHHHHHHHhCCCEEEEecceeeccCcccc
Confidence            4455556666677788999999999999999998889999999999999987654

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.94  E-value=1e-27  Score=199.80  Aligned_cols=171  Identities=9%  Similarity=0.033  Sum_probs=118.5

Q ss_pred             CCcEEEEEc--CccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhh-------c----CCCCCeEEEEc--------
Q 025755            5 DKERVCVTG--AGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKL-------E----GASENLQLFKT--------   63 (248)
Q Consensus         5 ~~k~vlVtG--~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~-------~----~~~~~~~~~~~--------   63 (248)
                      .+|++||||  +++|||+++++.|+++|++|++.+++............       .    ..........+        
T Consensus         1 n~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (329)
T d1uh5a_           1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN   80 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGG
T ss_pred             CCcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhc
Confidence            368999999  55799999999999999999999876532111110000       0    00111233333        


Q ss_pred             ------------cCCCHHHHHHHh-------CCCCEEEEccccCCCCC------CCCccccchhhhHHHHHHHHHHHHhc
Q 025755           64 ------------DLLDYEALCAAT-------AGCTGVFHVACPVPVGK------VPNPEVQLIDPAVVGTKNVLNSCVKA  118 (248)
Q Consensus        64 ------------Di~d~~~~~~~~-------~~id~vi~~ag~~~~~~------~~~~~~~~~~~n~~g~~~~~~~~~~~  118 (248)
                                  |+.+.+++++++       .++|++|||||..+...      ..+.|...+++|+.+...+++++.+.
T Consensus        81 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~~  160 (329)
T d1uh5a_          81 DIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNI  160 (329)
T ss_dssp             GCCHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred             ccchhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHhh
Confidence                        444544444443       47899999999765321      12446678999999999999998876


Q ss_pred             --CCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccccchHHHHHH----HHHHHHHHHHHhCCccEEEEccCee
Q 025755          119 --KVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAKT----IAEIQALEYAKRGELDIVTVCPSIV  192 (248)
Q Consensus       119 --~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~----~~e~l~~~~~~~~~i~v~~vrpg~i  192 (248)
                        +.++||++||.++..+.+++.                    .+|+.||+    +++.++.++++++|||||+|+||.+
T Consensus       161 m~~~GsIv~iss~~~~~~~p~y~--------------------~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG~i  220 (329)
T d1uh5a_         161 MKPQSSIISLTYHASQKVVPGYG--------------------GGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPL  220 (329)
T ss_dssp             EEEEEEEEEEECGGGTSCCTTCT--------------------TTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCC
T ss_pred             cccccccccceeehhcccccccc--------------------hhhhhhhccccccchhhHHHHhcccCcEEEEEecCcc
Confidence              457999999987666554321                    22999995    7777788887765799999999999


Q ss_pred             ecC
Q 025755          193 IGP  195 (248)
Q Consensus       193 ~g~  195 (248)
                      .|+
T Consensus       221 ~T~  223 (329)
T d1uh5a_         221 KSR  223 (329)
T ss_dssp             CCT
T ss_pred             cch
Confidence            883

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.94  E-value=7.8e-27  Score=185.72  Aligned_cols=200  Identities=15%  Similarity=0.070  Sum_probs=141.5

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHh-------C-
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAAT-------A-   76 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~-------~-   76 (248)
                      ++|+||||||++|||+++++.|+++|++|++++++..+.           ........+|..+.++.+.+.       . 
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   69 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEE-----------ASASVIVKMTDSFTEQADQVTAEVGKLLGD   69 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTT-----------SSEEEECCCCSCHHHHHHHHHHHHHHHHTT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccc-----------ccccceeecccCcHHHHHHHHHHHHHHhCC
Confidence            589999999999999999999999999999999876421           122334456666555443332       2 


Q ss_pred             -CCCEEEEccccCCCCCC-----CCccccchhhhHHHHHHHHHHHHhc--CCCEEEEEeccceeccCCCCCCCCccCCCC
Q 025755           77 -GCTGVFHVACPVPVGKV-----PNPEVQLIDPAVVGTKNVLNSCVKA--KVKRVVVVSSIGAVMLNPNWPKGQVMDEEC  148 (248)
Q Consensus        77 -~id~vi~~ag~~~~~~~-----~~~~~~~~~~n~~g~~~~~~~~~~~--~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~  148 (248)
                       ++|++|||||.......     .+.|+..+++|+.++.++.+++.+.  +.++||++||..+..+.+.+.         
T Consensus        70 ~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~~~~~~---------  140 (236)
T d1dhra_          70 QKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGTPGMI---------  140 (236)
T ss_dssp             CCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTBH---------
T ss_pred             CCceEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHHHcCCccCCc---------
Confidence             48999999996443211     2335668999999999998888775  457999999988776665433         


Q ss_pred             CCchhhhccccchHHHHHHHHHHHHHHHHHh-----CCccEEEEccCeeecCCCCCC-------CCccHHHHHHHHcCCC
Q 025755          149 WSDEEFCKATENYYCLAKTIAEIQALEYAKR-----GELDIVTVCPSIVIGPMLQPT-------INTSSLLLLGFLKGFF  216 (248)
Q Consensus       149 ~~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~-----~~i~v~~vrpg~i~g~~~~~~-------~~~~~~~~~~~~~~~~  216 (248)
                                  .|+.||+..+.+.+.++.+     .|||||+|+||.+.+|+.+..       ....+..+.....  +
T Consensus       141 ------------~Y~asKaal~~lt~~la~El~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~pe~va~~~~--~  206 (236)
T d1dhra_         141 ------------GYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKSMPEADFSSWTPLEFLVETFH--D  206 (236)
T ss_dssp             ------------HHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHHHSTTSCGGGSEEHHHHHHHHH--H
T ss_pred             ------------ccHHHHHHHHHHHHHHHHHhccCCCcEEEEEEEeccCcCCcchhhCccchhhcCCCHHHHHHHHH--H
Confidence                        3999998777777777643     369999999999999864321       1122333333332  5


Q ss_pred             CCCCCCchhhhhhhhh--ccceeE
Q 025755          217 FTTPSHSYMLERTLVL--NQGVRL  238 (248)
Q Consensus       217 l~~~~~~~~~g~~l~v--d~g~~~  238 (248)
                      +.+....+++|+++.|  +||.+-
T Consensus       207 l~s~~~~~i~G~~i~v~~~~g~t~  230 (236)
T d1dhra_         207 WITGNKRPNSGSLIQVVTTDGKTE  230 (236)
T ss_dssp             HHTTTTCCCTTCEEEEEEETTEEE
T ss_pred             HhCCCccCCCCCeEEEEEECCEEE
Confidence            6677788899986655  555443

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=1.1e-26  Score=188.45  Aligned_cols=172  Identities=16%  Similarity=0.059  Sum_probs=132.3

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-------
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-------   76 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-------   76 (248)
                      |+||++|||||++|||++++++|+++|++|++++|+.+.......+........+..+.+|+.+.+......+       
T Consensus        12 L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g   91 (269)
T d1xu9a_          12 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMG   91 (269)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHhC
Confidence            7899999999999999999999999999999999987533322222222234568888999999887766543       


Q ss_pred             CCCEEEEccccCCCCCCC----CccccchhhhHHHHHHHHHHHHhc---CCCEEEEEeccceeccCCCCCCCCccCCCCC
Q 025755           77 GCTGVFHVACPVPVGKVP----NPEVQLIDPAVVGTKNVLNSCVKA---KVKRVVVVSSIGAVMLNPNWPKGQVMDEECW  149 (248)
Q Consensus        77 ~id~vi~~ag~~~~~~~~----~~~~~~~~~n~~g~~~~~~~~~~~---~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~  149 (248)
                      .+|+++||||........    +.+...+++|+.++..+.+.+.+.   +.++||++||.++..+.+....         
T Consensus        92 ~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~G~ii~isS~~~~~~~p~~~~---------  162 (269)
T d1xu9a_          92 GLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPMVAA---------  162 (269)
T ss_dssp             SCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSCCTTCHH---------
T ss_pred             CccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhcCCcceEeccchhcCCCCCchH---------
Confidence            589999999976554322    334578899999988877777543   3479999999888777665433         


Q ss_pred             CchhhhccccchHHHHHH----HHHHHHHHHHHh-CCccEEEEccCeeecCC
Q 025755          150 SDEEFCKATENYYCLAKT----IAEIQALEYAKR-GELDIVTVCPSIVIGPM  196 (248)
Q Consensus       150 ~~~~~~~~~~~~Y~~sK~----~~e~l~~~~~~~-~~i~v~~vrpg~i~g~~  196 (248)
                                  |+.||+    +++.++.+++.+ .+|+|++|+||.+.|++
T Consensus       163 ------------Y~asKaal~~~~~~La~El~~~~~~I~V~~v~PG~v~T~~  202 (269)
T d1xu9a_         163 ------------YSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTET  202 (269)
T ss_dssp             ------------HHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHH
T ss_pred             ------------HHHHHHHHHHHHHHHHHHhhhcCCCEEEEEEecCcCCCcH
Confidence                        999996    566666666653 47999999999999985

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=2.3e-26  Score=192.74  Aligned_cols=183  Identities=21%  Similarity=0.157  Sum_probs=136.7

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCC-----chhhHHhhhhc-CCCCCeEEEEccCCCHHHHHHHhCC--C
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPC-----DEKNAHLKKLE-GASENLQLFKTDLLDYEALCAATAG--C   78 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~-----~~~~~~~~~~~-~~~~~~~~~~~Di~d~~~~~~~~~~--i   78 (248)
                      ||||||||+||||++++++|+++|++|+++++...     .......+... ....++.++++|++|.+.+.+++.+  +
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~   82 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKYSF   82 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHCCE
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeecccccccccccccccc
Confidence            79999999999999999999999999999975211     00111111111 1246799999999999999998864  5


Q ss_pred             CEEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccc
Q 025755           79 TGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKAT  158 (248)
Q Consensus        79 d~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~  158 (248)
                      ++++|+|+..........+.+.+++|+.|+.++++++++.+++++||+||+..+.....   .....++..      ..+
T Consensus        83 ~~i~h~Aa~~~~~~~~~~p~~~~~~Nv~gt~~l~~~~~~~~v~~~i~~ss~~~~~~~~~---~~~~~~~~~------~~~  153 (346)
T d1ek6a_          83 MAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQY---LPLDEAHPT------GGC  153 (346)
T ss_dssp             EEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGCSCSS---SSBCTTSCC------CCC
T ss_pred             ccccccccccCcHhhHhCHHHHHHhhhcccccccchhhhcCcccccccccceeeecccc---ccccccccc------ccc
Confidence            68999999765443333456789999999999999999999999999999764443321   111111111      223


Q ss_pred             cchHHHHHHHHHHHHHHHHHh-CCccEEEEccCeeecCCCC
Q 025755          159 ENYYCLAKTIAEIQALEYAKR-GELDIVTVCPSIVIGPMLQ  198 (248)
Q Consensus       159 ~~~Y~~sK~~~e~l~~~~~~~-~~i~v~~vrpg~i~g~~~~  198 (248)
                      .++|+.+|..+|..+.+++.. .+++.+++||+.+|||...
T Consensus       154 ~~~Y~~~k~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~  194 (346)
T d1ek6a_         154 TNPYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHAS  194 (346)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTT
T ss_pred             CChHHHHHHHHHHHHHHHHHhccCCceEEEeecceeccCCC
Confidence            456999999999999998775 4799999999999998653

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=99.94  E-value=6.1e-27  Score=189.40  Aligned_cols=209  Identities=19%  Similarity=0.222  Sum_probs=139.7

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcC-CCCCeEEEEccCCC----HHHHHHHh------
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEG-ASENLQLFKTDLLD----YEALCAAT------   75 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Di~d----~~~~~~~~------   75 (248)
                      .++|||||++|||++++++|+++|++|++++|+.++..+...+++.. ...+....+.|+.+    .+.+++++      
T Consensus         2 ~vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (266)
T d1mxha_           2 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRA   81 (266)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHH
Confidence            47899999999999999999999999999999875444443443333 34567777777654    33343333      


Q ss_pred             -CCCCEEEEccccCCCCCCCC-------c--------cccchhhhHHHHHHHHHHHHhc---------CCCEEEEEeccc
Q 025755           76 -AGCTGVFHVACPVPVGKVPN-------P--------EVQLIDPAVVGTKNVLNSCVKA---------KVKRVVVVSSIG  130 (248)
Q Consensus        76 -~~id~vi~~ag~~~~~~~~~-------~--------~~~~~~~n~~g~~~~~~~~~~~---------~~~~iV~vSS~~  130 (248)
                       .++|++|||||........+       .        +..++..|..+...........         ....++++||..
T Consensus        82 ~g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (266)
T d1mxha_          82 FGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAM  161 (266)
T ss_dssp             HSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECCGG
T ss_pred             hCCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccchhhhhcc
Confidence             36999999999876442211       0        1234455655555555544332         235777888876


Q ss_pred             eeccCCCCCCCCccCCCCCCchhhhccccchHHHHHH----HHHHHHHHHHHhCCccEEEEccCeeecCCCCCCCCccHH
Q 025755          131 AVMLNPNWPKGQVMDEECWSDEEFCKATENYYCLAKT----IAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTINTSSL  206 (248)
Q Consensus       131 ~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~----~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~~~~~  206 (248)
                      +..+.+.+.                     .|+.||+    +++.++.++++++ ||||+|+||.+.+|...+. .....
T Consensus       162 ~~~~~~~~~---------------------~Y~asKaal~~lt~~lA~e~~~~g-IrVN~I~PG~i~t~~~~~~-~~~~~  218 (266)
T d1mxha_         162 TDLPLPGFC---------------------VYTMAKHALGGLTRAAALELAPRH-IRVNAVAPGLSLLPPAMPQ-ETQEE  218 (266)
T ss_dssp             GGSCCTTCH---------------------HHHHHHHHHHHHHHHHHHHHGGGT-EEEEEEEESSBSCCSSSCH-HHHHH
T ss_pred             ccccCcchh---------------------hhhhhHHHHhhhHHHHHHHhCccC-cEEEEeccCcEeccccCCH-HHHHH
Confidence            655555433                     3999995    6667777777654 9999999999998865432 11111


Q ss_pred             HHHHHHcCC-------------CCCCCCCchhhhhhhhhccceeE
Q 025755          207 LLLGFLKGF-------------FFTTPSHSYMLERTLVLNQGVRL  238 (248)
Q Consensus       207 ~~~~~~~~~-------------~l~~~~~~~~~g~~l~vd~g~~~  238 (248)
                      +..+...++             ||.++.+.|+||++|.||||+.+
T Consensus       219 ~~~~~pl~r~~~~peeva~~v~fL~s~~s~~itG~~i~vDGG~~l  263 (266)
T d1mxha_         219 YRRKVPLGQSEASAAQIADAIAFLVSKDAGYITGTTLKVDGGLIL  263 (266)
T ss_dssp             HHTTCTTTSCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHhcCCCCCCCCCHHHHHHHHHHHhCchhCCccCCeEEECccHhh
Confidence            111111111             78888899999999999999875

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=99.94  E-value=1.7e-26  Score=187.04  Aligned_cols=210  Identities=15%  Similarity=0.076  Sum_probs=139.7

Q ss_pred             CCCcEEEEEcC--ccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-----
Q 025755            4 EDKERVCVTGA--GGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-----   76 (248)
Q Consensus         4 l~~k~vlVtG~--~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-----   76 (248)
                      |+||++|||||  ++|||++++++|+++|++|++++|+..+..+...+   ....+...+++|+++.+++..+++     
T Consensus         4 l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~~~~---~~~~~~~~~~~dv~~~~~~~~~~~~v~~~   80 (268)
T d2h7ma1           4 LDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITD---RLPAKAPLLELDVQNEEHLASLAGRVTEA   80 (268)
T ss_dssp             TTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHT---TSSSCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHH---HcCCceeeEeeecccccccccccchhhhc
Confidence            79999999995  46899999999999999999999987433222222   224567788999999877666543     


Q ss_pred             -----CCCEEEEccccCCCCCC-C--------CccccchhhhHHHHHHHHHHHHhc-CCCEEEEEeccceeccCCCCCCC
Q 025755           77 -----GCTGVFHVACPVPVGKV-P--------NPEVQLIDPAVVGTKNVLNSCVKA-KVKRVVVVSSIGAVMLNPNWPKG  141 (248)
Q Consensus        77 -----~id~vi~~ag~~~~~~~-~--------~~~~~~~~~n~~g~~~~~~~~~~~-~~~~iV~vSS~~~~~~~~~~~~~  141 (248)
                           .+|++|||||..+.... .        ..+...+.+|........+.+.+. +.+.+++++|.....+.+.+   
T Consensus        81 ~~~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~p~~---  157 (268)
T d2h7ma1          81 IGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSRAMPAY---  157 (268)
T ss_dssp             HCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSSCCTTT---
T ss_pred             cccCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhcccccccccccccccccCccc---
Confidence                 37999999997643211 1        112334566777777777766655 23345555554544444432   


Q ss_pred             CccCCCCCCchhhhccccchHHHHHH----HHHHHHHHHHHhCCccEEEEccCeeecCCCCC-----CCC----ccHHHH
Q 025755          142 QVMDEECWSDEEFCKATENYYCLAKT----IAEIQALEYAKRGELDIVTVCPSIVIGPMLQP-----TIN----TSSLLL  208 (248)
Q Consensus       142 ~~~~e~~~~~~~~~~~~~~~Y~~sK~----~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~-----~~~----~~~~~~  208 (248)
                                        ..|+.+|+    +++.++.+++++ |||||+|+||.+.+++...     ...    ....+.
T Consensus       158 ------------------~~y~~sK~a~~~ltr~lA~e~~~~-gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~  218 (268)
T d2h7ma1         158 ------------------NWMTVAKSALESVNRFVAREAGKY-GVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLE  218 (268)
T ss_dssp             ------------------HHHHHHHHHHHHHHHHHHHHHHTT-TCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHH
T ss_pred             ------------------chhhccccchhhccccchhhhhcc-CCcceEEecCCCCChhhhhhccchhhhhhccchHHHH
Confidence                              33999996    555666666655 4999999999999874311     000    001111


Q ss_pred             HHHH-----cCC------------CCCCCCCchhhhhhhhhccceeE
Q 025755          209 LGFL-----KGF------------FFTTPSHSYMLERTLVLNQGVRL  238 (248)
Q Consensus       209 ~~~~-----~~~------------~l~~~~~~~~~g~~l~vd~g~~~  238 (248)
                      +...     .++            ||.++...|+||++|.||||.+.
T Consensus       219 ~~~~~~~pl~rr~~~p~dva~~v~fL~Sd~a~~iTG~~i~vDGG~~~  265 (268)
T d2h7ma1         219 EGWDQRAPIGWNMKDATPVAKTVCALLSDWLPATTGDIIYADGGAHT  265 (268)
T ss_dssp             HHHHHHCTTCCCTTCCHHHHHHHHHHHSSSCTTCCSEEEEESTTGGG
T ss_pred             HHHHhcCCCCCCCCCHHHHHHHHHHHhCchhcCccCCEEEECcCccc
Confidence            1110     111            88899999999999999999863

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.93  E-value=2.7e-25  Score=178.25  Aligned_cols=178  Identities=16%  Similarity=0.123  Sum_probs=120.4

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCC--eEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC-----
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGY--MVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA-----   76 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~-----   76 (248)
                      |+.|+||||||++|||++++++|+++|+  +|++.+|+.+... + +++  ....++.++.+|++|.++++++++     
T Consensus         1 M~~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~-~-l~~--~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~   76 (250)
T d1yo6a1           1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKAT-E-LKS--IKDSRVHVLPLTVTCDKSLDTFVSKVGEI   76 (250)
T ss_dssp             CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCH-H-HHT--CCCTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CcCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHH-H-HHH--hhCCceEEEEEecCCHHHHHHHHHHHHHH
Confidence            3569999999999999999999999996  6888888864322 1 221  234679999999999998887764     


Q ss_pred             ----CCCEEEEccccCCC-CCC----CCccccchhhhHHHHHHHHHHHHhc---------------CCCEEEEEecccee
Q 025755           77 ----GCTGVFHVACPVPV-GKV----PNPEVQLIDPAVVGTKNVLNSCVKA---------------KVKRVVVVSSIGAV  132 (248)
Q Consensus        77 ----~id~vi~~ag~~~~-~~~----~~~~~~~~~~n~~g~~~~~~~~~~~---------------~~~~iV~vSS~~~~  132 (248)
                          .+|++|||||.... ...    .+.++..+++|+.|+.++.+.+.+.               ..++++++||....
T Consensus        77 ~~~~~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~  156 (250)
T d1yo6a1          77 VGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGS  156 (250)
T ss_dssp             HGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGC
T ss_pred             hCCCCeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceecccccccccccc
Confidence                38999999997543 211    1235678999999998888777532               12678888876543


Q ss_pred             ccCCCCCCCCccCCCCCCchhhhccccchHHHHHH----HHHHHHHHHHHhCCccEEEEccCeeecCCCCCC
Q 025755          133 MLNPNWPKGQVMDEECWSDEEFCKATENYYCLAKT----IAEIQALEYAKRGELDIVTVCPSIVIGPMLQPT  200 (248)
Q Consensus       133 ~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~----~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~  200 (248)
                      ........              ...+...|+.||+    +++.++.++.++ ||+|++|+||++.|++....
T Consensus       157 ~~~~~~~~--------------~~~~~~aY~aSKaal~~l~~~la~el~~~-gI~v~~i~PG~v~T~m~~~~  213 (250)
T d1yo6a1         157 ITDNTSGS--------------AQFPVLAYRMSKAAINMFGRTLAVDLKDD-NVLVVNFCPGWVQTNLGGKN  213 (250)
T ss_dssp             STTCCSTT--------------SSSCBHHHHHHHHHHHHHHHHHHHHTGGG-TCEEEEEECCCC--------
T ss_pred             ccCCcccc--------------cchhHHHHHHHHHHHHHHHHHHHHHhccc-CeEEEEEecCCCCCCCCCCC
Confidence            33221000              0011234999996    555555555544 59999999999999986543

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=7.6e-25  Score=170.48  Aligned_cols=158  Identities=16%  Similarity=0.109  Sum_probs=122.4

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEE
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFH   83 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~   83 (248)
                      |.||||+||||||+||++++++|+++|++|+++.|+..+...       ....+++++.+|++|.+++.++++++|+|||
T Consensus         1 m~~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~-------~~~~~~~~~~gD~~d~~~l~~al~~~d~vi~   73 (205)
T d1hdoa_           1 MAVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPS-------EGPRPAHVVVGDVLQAADVDKTVAGQDAVIV   73 (205)
T ss_dssp             CCCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCS-------SSCCCSEEEESCTTSHHHHHHHHTTCSEEEE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhccc-------ccccccccccccccchhhHHHHhcCCCEEEE
Confidence            467999999999999999999999999999999998743211       1235689999999999999999999999999


Q ss_pred             ccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccccchHH
Q 025755           84 VACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYC  163 (248)
Q Consensus        84 ~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~  163 (248)
                      ++|....       ....+.+..++.++++++++.+++++|++||...+.......           ..      ...|.
T Consensus        74 ~~g~~~~-------~~~~~~~~~~~~~l~~aa~~~~v~r~i~~ss~~~~~~~~~~~-----------~~------~~~~~  129 (205)
T d1hdoa_          74 LLGTRND-------LSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKVP-----------PR------LQAVT  129 (205)
T ss_dssp             CCCCTTC-------CSCCCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCTTCSC-----------GG------GHHHH
T ss_pred             EeccCCc-------hhhhhhhHHHHHHHHHHHHhcCCCeEEEEeeeeccCCCcccc-----------cc------ccccc
Confidence            9986433       233467788999999999999999999999965433221100           00      12377


Q ss_pred             HHHHHHHHHHHHHHHhCCccEEEEccCeeecCC
Q 025755          164 LAKTIAEIQALEYAKRGELDIVTVCPSIVIGPM  196 (248)
Q Consensus       164 ~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~  196 (248)
                      ..|..+|.+.+    +.++++++|||+.+++..
T Consensus       130 ~~~~~~e~~l~----~~~~~~tiirp~~~~~~~  158 (205)
T d1hdoa_         130 DDHIRMHKVLR----ESGLKYVAVMPPHIGDQP  158 (205)
T ss_dssp             HHHHHHHHHHH----HTCSEEEEECCSEEECCC
T ss_pred             hHHHHHHHHHH----hcCCceEEEecceecCCC
Confidence            77777775543    456999999999998643

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.93  E-value=1.4e-25  Score=180.83  Aligned_cols=169  Identities=20%  Similarity=0.232  Sum_probs=137.9

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCC-eEEEEEcCCCc--hhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCC-----
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGY-MVHGTVRDPCD--EKNAHLKKLEGASENLQLFKTDLLDYEALCAATAG-----   77 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~-~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~-----   77 (248)
                      ++++|||||+||||+++++.|+++|+ +|++++|+..+  ...+..+++.....++.++.+|++|.++++++++.     
T Consensus         9 ~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i~~~~   88 (259)
T d2fr1a1           9 TGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDDV   88 (259)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTTS
T ss_pred             cCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhccccccc
Confidence            57999999999999999999999999 58888886432  23334444555567899999999999999998763     


Q ss_pred             -CCEEEEccccCCCCCC----CCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCch
Q 025755           78 -CTGVFHVACPVPVGKV----PNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDE  152 (248)
Q Consensus        78 -id~vi~~ag~~~~~~~----~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~  152 (248)
                       +|.||||+|.......    .+.+...+++|+.++.++.+++.+.+.++||++||..+..+.+.+..            
T Consensus        89 ~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~iv~~SS~a~~~g~~~~~~------------  156 (259)
T d2fr1a1          89 PLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAFGAPGLGG------------  156 (259)
T ss_dssp             CEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHTCCTTCTT------------
T ss_pred             cccccccccccccccccccccHHHHHHHhhhhccchhHHHHHhhccCCceEeeecchhhccCCcccHH------------
Confidence             6899999998765432    23345678999999999999998888889999999999888877655            


Q ss_pred             hhhccccchHHHHHHHHHHHHHHHHHhCCccEEEEccCeeecCC
Q 025755          153 EFCKATENYYCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPM  196 (248)
Q Consensus       153 ~~~~~~~~~Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~  196 (248)
                               |+.+|++.+.+++++..++ +++++|+||.+.+++
T Consensus       157 ---------YaAaka~l~~la~~~~~~G-i~v~~I~pg~~~~~g  190 (259)
T d2fr1a1         157 ---------YAPGNAYLDGLAQQRRSDG-LPATAVAWGTWAGSG  190 (259)
T ss_dssp             ---------THHHHHHHHHHHHHHHHTT-CCCEEEEECCBC---
T ss_pred             ---------HHHHHHhHHHHHHHHHhCC-CCEEECCCCcccCCc
Confidence                     9999999999999998765 999999999987654

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.93  E-value=2.6e-26  Score=182.58  Aligned_cols=193  Identities=18%  Similarity=0.151  Sum_probs=135.2

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHh---------C
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAAT---------A   76 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~---------~   76 (248)
                      .++||||||++|||++++++|+++|++|++++|+..+.           ........+|+.+.+......         .
T Consensus         2 ~gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g   70 (235)
T d1ooea_           2 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQ-----------ADSNILVDGNKNWTEQEQSILEQTASSLQGS   70 (235)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTT-----------SSEEEECCTTSCHHHHHHHHHHHHHHHHTTC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhc-----------ccccceeccccCchhHHHHHHHHHHHHhcCC
Confidence            46789999999999999999999999999999986421           122334456766544433222         3


Q ss_pred             CCCEEEEccccCCCCCC-----CCccccchhhhHHHHHHHHHHHHhc--CCCEEEEEeccceeccCCCCCCCCccCCCCC
Q 025755           77 GCTGVFHVACPVPVGKV-----PNPEVQLIDPAVVGTKNVLNSCVKA--KVKRVVVVSSIGAVMLNPNWPKGQVMDEECW  149 (248)
Q Consensus        77 ~id~vi~~ag~~~~~~~-----~~~~~~~~~~n~~g~~~~~~~~~~~--~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~  149 (248)
                      ++|+||||||.......     .+.|+..+++|+.++..+++++.+.  +.++||++||..+..+.+++..         
T Consensus        71 ~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~~~~~~~~~~~---------  141 (235)
T d1ooea_          71 QVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPTPSMIG---------  141 (235)
T ss_dssp             CEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTBHH---------
T ss_pred             CeeEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHHhcCCcccccc---------
Confidence            58999999997543211     1234567899999999998888775  3479999999887777665333         


Q ss_pred             CchhhhccccchHHHHHHHHHHHHHHHHHh-----CCccEEEEccCeeecCCCCCC-------CCccHHHH-HHHHcCCC
Q 025755          150 SDEEFCKATENYYCLAKTIAEIQALEYAKR-----GELDIVTVCPSIVIGPMLQPT-------INTSSLLL-LGFLKGFF  216 (248)
Q Consensus       150 ~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~-----~~i~v~~vrpg~i~g~~~~~~-------~~~~~~~~-~~~~~~~~  216 (248)
                                  |+.||+..+.+.+.++.+     .++++++|+||.+.+|+.+..       ....+..+ +.+..  +
T Consensus       142 ------------Y~asKaal~~l~~~la~e~~~~~~~i~v~~i~Pg~~~T~~~~~~~~~~~~~~~~~~~~va~~~~~--~  207 (235)
T d1ooea_         142 ------------YGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKWMPNADHSSWTPLSFISEHLLK--W  207 (235)
T ss_dssp             ------------HHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHHHSTTCCGGGCBCHHHHHHHHHH--H
T ss_pred             ------------hHHHHHHHHHHHHHHHHHhccCCCceEEEEEecCcCcCcchhhhCcCCccccCCCHHHHHHHHHH--H
Confidence                        999998777777777644     368999999999999853211       01122222 22221  4


Q ss_pred             CCCCCCchhhhhhhhh
Q 025755          217 FTTPSHSYMLERTLVL  232 (248)
Q Consensus       217 l~~~~~~~~~g~~l~v  232 (248)
                      +..+.+.+++|+.+.|
T Consensus       208 l~~~~~~~~tG~~i~v  223 (235)
T d1ooea_         208 TTETSSRPSSGALLKI  223 (235)
T ss_dssp             HHCGGGCCCTTCEEEE
T ss_pred             hcCccccCCCceEEEE
Confidence            4455667889998888

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=3.2e-26  Score=181.71  Aligned_cols=196  Identities=15%  Similarity=0.105  Sum_probs=145.4

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCC--eEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEE
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGY--MVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGV   81 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~v   81 (248)
                      |++|+||||||||+||++++++|+++|.  +|++++|++.......       ...+....+|+.+.+++.+.++++|++
T Consensus        12 m~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~~-------~~~i~~~~~D~~~~~~~~~~~~~~d~v   84 (232)
T d2bkaa1          12 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA-------YKNVNQEVVDFEKLDDYASAFQGHDVG   84 (232)
T ss_dssp             HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG-------GGGCEEEECCGGGGGGGGGGGSSCSEE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcccc-------cceeeeeeecccccccccccccccccc
Confidence            4678999999999999999999999995  8999999764322111       246788889999999999999999999


Q ss_pred             EEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccccch
Q 025755           82 FHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENY  161 (248)
Q Consensus        82 i~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~  161 (248)
                      ||++|....   ......+.++|+.++.+++++|.+.+++++|++||.... ..+                      .+.
T Consensus        85 i~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~a~~~~v~~fi~~Ss~~~~-~~~----------------------~~~  138 (232)
T d2bkaa1          85 FCCLGTTRG---KAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGAD-KSS----------------------NFL  138 (232)
T ss_dssp             EECCCCCHH---HHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCC-TTC----------------------SSH
T ss_pred             ccccccccc---ccchhhhhhhcccccceeeecccccCccccccCCccccc-cCc----------------------cch
Confidence            999986432   123466789999999999999999999999999996642 221                      134


Q ss_pred             HHHHHHHHHHHHHHHHHhCCc-cEEEEccCeeecCCCCCCCCccHHHHHHHHcCCCCCCCCCchhhhhhhhhccceeEEE
Q 025755          162 YCLAKTIAEIQALEYAKRGEL-DIVTVCPSIVIGPMLQPTINTSSLLLLGFLKGFFFTTPSHSYMLERTLVLNQGVRLYR  240 (248)
Q Consensus       162 Y~~sK~~~e~l~~~~~~~~~i-~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~l~vd~g~~~~~  240 (248)
                      |+.+|..+|..+.++    +. +++++|||.+||+.....  .......+...     .....+.....+++++...++.
T Consensus       139 Y~~~K~~~E~~l~~~----~~~~~~IlRP~~i~G~~~~~~--~~~~~~~~~~~-----~~~~~~~~~~~I~~~dvA~a~i  207 (232)
T d2bkaa1         139 YLQVKGEVEAKVEEL----KFDRYSVFRPGVLLCDRQESR--PGEWLVRKFFG-----SLPDSWASGHSVPVVTVVRAML  207 (232)
T ss_dssp             HHHHHHHHHHHHHTT----CCSEEEEEECCEEECTTGGGS--HHHHHHHHHHC-----SCCTTGGGGTEEEHHHHHHHHH
T ss_pred             hHHHHHHhhhccccc----cccceEEecCceeecCCCcCc--HHHHHHHHHhh-----ccCCcccCCCeEEHHHHHHHHH
Confidence            999999999776543    35 489999999999875432  22223333332     2234555566688888776554


Q ss_pred             eec
Q 025755          241 CKI  243 (248)
Q Consensus       241 ~~~  243 (248)
                      .++
T Consensus       208 ~~~  210 (232)
T d2bkaa1         208 NNV  210 (232)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            443

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.92  E-value=1.2e-25  Score=180.81  Aligned_cols=212  Identities=17%  Similarity=0.197  Sum_probs=127.9

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHh--------CC
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAAT--------AG   77 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~--------~~   77 (248)
                      ||+||||||++|||++++++|+++|++|++++|+..+                  ...|+.+.+..+...        ..
T Consensus         1 mkVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~------------------~~~d~~~~~~~~~~~~~~~~~~~~~   62 (257)
T d1fjha_           1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAE------------------VIADLSTAEGRKQAIADVLAKCSKG   62 (257)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSS------------------EECCTTSHHHHHHHHHHHHTTCTTC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHH------------------HHHHhcCHHHHHHHHHHHHHHhCCC
Confidence            6899999999999999999999999999999987632                  235777665544432        25


Q ss_pred             CCEEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHh----cCCCEEEEEeccceeccCCCCCCCCc-cCCCCCCch
Q 025755           78 CTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVK----AKVKRVVVVSSIGAVMLNPNWPKGQV-MDEECWSDE  152 (248)
Q Consensus        78 id~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~----~~~~~iV~vSS~~~~~~~~~~~~~~~-~~e~~~~~~  152 (248)
                      +|+++||||....   .+.+.....+|..+...+.+...+    ........+++............... ........-
T Consensus        63 id~lv~~Ag~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~i  139 (257)
T d1fjha_          63 MDGLVLCAGLGPQ---TKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKA  139 (257)
T ss_dssp             CSEEEECCCCCTT---CSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHH
T ss_pred             CcEEEEcCCCCCc---HHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCcceeeeeccccchhhhhhhhhhhccCCcEEEE
Confidence            8999999987654   344566778888887776665543    34556777766433221100000000 000000000


Q ss_pred             hh------hccccchHHHHHH----HHHHHHHHHHHhCCccEEEEccCeeecCCCCCCCCccHHHHHHHH-----cCC--
Q 025755          153 EF------CKATENYYCLAKT----IAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTINTSSLLLLGFL-----KGF--  215 (248)
Q Consensus       153 ~~------~~~~~~~Y~~sK~----~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~-----~~~--  215 (248)
                      ..      ......+|+.||+    +++.++.+++++ |||||+|+||.+.+|+....... ..+.+...     .++  
T Consensus       140 ~s~~~~~~~~~~~~~Y~asKaal~~ltr~lA~el~~~-gIrVN~I~PG~i~T~~~~~~~~~-~~~~~~~~~~~~PlgR~g  217 (257)
T d1fjha_         140 RAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEA-GVRLNTIAPGATETPLLQAGLQD-PRYGESIAKFVPPMGRRA  217 (257)
T ss_dssp             HHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHT-TCEEEEEEECC----------------------CCCSTTSCC
T ss_pred             eeehhccCCCcchHHHHHHhhhhhccccccccccccc-cccccccccCCcCChhHHhhcCC-HHHHHHHHhcCCCCCCCc
Confidence            00      0001234999995    667777777775 49999999999999875432110 11111111     111  


Q ss_pred             ----------CCCCCCCchhhhhhhhhccceeEEE
Q 025755          216 ----------FFTTPSHSYMLERTLVLNQGVRLYR  240 (248)
Q Consensus       216 ----------~l~~~~~~~~~g~~l~vd~g~~~~~  240 (248)
                                ||.++.+.|+||++|.||||+++++
T Consensus       218 ~p~eva~~v~fL~S~~s~~itG~~i~vDGG~tav~  252 (257)
T d1fjha_         218 EPSEMASVIAFLMSPAASYVHGAQIVIDGGIDAVM  252 (257)
T ss_dssp             CTHHHHHHHHHHTSGGGTTCCSCEEEESTTHHHHH
T ss_pred             CHHHHHHHHHHHhCchhCCccCceEEeCCCccchh
Confidence                      8889999999999999999987643

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=99.88  E-value=1.8e-23  Score=169.62  Aligned_cols=195  Identities=15%  Similarity=0.006  Sum_probs=146.3

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC--CCCEEEEc
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA--GCTGVFHV   84 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~--~id~vi~~   84 (248)
                      ||||||||||+||++++++|.++|++|++++|+.                      +|+.|.++++++++  ++|+|||+
T Consensus         2 MKIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~----------------------~D~~d~~~~~~~l~~~~~d~vih~   59 (281)
T d1vl0a_           2 MKILITGANGQLGREIQKQLKGKNVEVIPTDVQD----------------------LDITNVLAVNKFFNEKKPNVVINC   59 (281)
T ss_dssp             EEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT----------------------CCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEeechh----------------------ccCCCHHHHHHHHHHcCCCEEEee
Confidence            5799999999999999999999999999998763                      58999999999887  67999999


Q ss_pred             cccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccccchHHH
Q 025755           85 ACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCL  164 (248)
Q Consensus        85 ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~  164 (248)
                      |+.................|+.....+.+.+.... ..+++.||.. +++.+.   ..+..|+++..+      ...|+.
T Consensus        60 a~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~-~~~~~~ss~~-v~~~~~---~~~~~e~~~~~~------~~~~~~  128 (281)
T d1vl0a_          60 AAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVG-AEIVQISTDY-VFDGEA---KEPITEFDEVNP------QSAYGK  128 (281)
T ss_dssp             CCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHT-CEEEEEEEGG-GSCSCC---SSCBCTTSCCCC------CSHHHH
T ss_pred             ccccccccccccchhhccccccccccccccccccc-ccccccccce-eeeccc---cccccccccccc------hhhhhh
Confidence            98765433333445677889999999988888765 4777777755 444432   556677766554      445999


Q ss_pred             HHHHHHHHHHHHHHhCCccEEEEccCeeecCCCCCCCCccHHHHHHHHcCCCCCCCCCchhhhhhhhhccceeEEEeecc
Q 025755          165 AKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKGFFFTTPSHSYMLERTLVLNQGVRLYRCKIQ  244 (248)
Q Consensus       165 sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~l~vd~g~~~~~~~~~  244 (248)
                      +|...|.++..+    +.+..++||+++|||...    ....++.....+.......+  ...+.+++|+.+.++..+++
T Consensus       129 ~k~~~e~~~~~~----~~~~~i~R~~~vyG~~~~----~~~~~~~~~~~~~~~~~~~~--~~~~~i~v~D~~~~~~~~~~  198 (281)
T d1vl0a_         129 TKLEGENFVKAL----NPKYYIVRTAWLYGDGNN----FVKTMINLGKTHDELKVVHD--QVGTPTSTVDLARVVLKVID  198 (281)
T ss_dssp             HHHHHHHHHHHH----CSSEEEEEECSEESSSSC----HHHHHHHHHHHCSEEEEESS--CEECCEEHHHHHHHHHHHHH
T ss_pred             hhhHHHHHHHHh----CCCccccceeEEeCCCcc----cccchhhhhccCCceeecCC--ceeccchhhhhhhhhhhhhh
Confidence            998888776543    478999999999999753    55667777777765443333  34567888887776655554

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=99.85  E-value=8e-22  Score=161.27  Aligned_cols=213  Identities=16%  Similarity=0.112  Sum_probs=135.0

Q ss_pred             EEEEcCccHHHHHHHHHHHHCCC-eEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHH-HHHH-----hCCCCEE
Q 025755            9 VCVTGAGGYIASWLVKYLLLKGY-MVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEA-LCAA-----TAGCTGV   81 (248)
Q Consensus         9 vlVtG~~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~-~~~~-----~~~id~v   81 (248)
                      ||||||+||||++++++|+++|+ +|+++++-...........    .     ..+|..+.+. ....     +..+++|
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~~~~~~~----~-----~~~~~~~~~~~~~~~~~~~~~~~~~~i   72 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVD----L-----NIADYMDKEDFLIQIMAGEEFGDVEAI   72 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHHHT----S-----CCSEEEEHHHHHHHHHTTCCCSSCCEE
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcchhhcccc----c-----chhhhccchHHHHHHhhhhcccchhhh
Confidence            89999999999999999999996 6888764332111111111    0     1122232222 2222     2357899


Q ss_pred             EEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccccch
Q 025755           82 FHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENY  161 (248)
Q Consensus        82 i~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~  161 (248)
                      +|.|+.....  ..+...+.+.|+.++.++++++...+.+ +|+.||...+++..    .....++.+      ..+.+.
T Consensus        73 ~~~aa~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~i~-~v~~ss~~~~~~~~----~~~~~~~~~------~~~~~~  139 (307)
T d1eq2a_          73 FHEGACSSTT--EWDGKYMMDNNYQYSKELLHYCLEREIP-FLYASSAATYGGRT----SDFIESREY------EKPLNV  139 (307)
T ss_dssp             EECCSCCCTT--CCCHHHHHHHTHHHHHHHHHHHHHHTCC-EEEEEEGGGGTTCC----SCBCSSGGG------CCCSSH
T ss_pred             hhhccccccc--cccccccccccccccccccccccccccc-cccccccccccccc----ccccccccc------cccccc
Confidence            9999865443  2344567788899999999999998875 55555545444432    222233222      344566


Q ss_pred             HHHHHHHHHHHHHHHHHhCCccEEEEccCeeecCCCCCC---CCccHHHHHHHHcCCCCC-CCCCchhhhhhhhhcccee
Q 025755          162 YCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPT---INTSSLLLLGFLKGFFFT-TPSHSYMLERTLVLNQGVR  237 (248)
Q Consensus       162 Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~---~~~~~~~~~~~~~~~~l~-~~~~~~~~g~~l~vd~g~~  237 (248)
                      |+.+|..+|.++..+..++++++.++||+++|||.+...   ......++.++..++... ..++.....+.+++++...
T Consensus       140 Y~~~K~~~e~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~d~~~  219 (307)
T d1eq2a_         140 YGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVAD  219 (307)
T ss_dssp             HHHHHHHHHHHHHHHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHHH
T ss_pred             cccccchhhhhccccccccccccccccceeEeeccccccccccccccccccccccccceeeecCccceeeeeeecccHHH
Confidence            999999999999999999999999999999999976543   123445666666665433 3455666677888888766


Q ss_pred             EEEeec
Q 025755          238 LYRCKI  243 (248)
Q Consensus       238 ~~~~~~  243 (248)
                      ++..++
T Consensus       220 ~~~~~~  225 (307)
T d1eq2a_         220 VNLWFL  225 (307)
T ss_dssp             HHHHHH
T ss_pred             HHHHHh
Confidence            654433

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=99.84  E-value=3.1e-22  Score=163.23  Aligned_cols=174  Identities=12%  Similarity=-0.012  Sum_probs=124.1

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC--CCCEEEEc
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA--GCTGVFHV   84 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~--~id~vi~~   84 (248)
                      |+||||||+|+||+++++.|.++|+.|. +++....                  +.+|++|.+.++++++  ++|+|||+
T Consensus         1 MKILItG~tGfiG~~l~~~L~~~g~~v~-~~~~~~~------------------~~~Dl~~~~~~~~~i~~~~~D~Vih~   61 (298)
T d1n2sa_           1 MNILLFGKTGQVGWELQRSLAPVGNLIA-LDVHSKE------------------FCGDFSNPKGVAETVRKLRPDVIVNA   61 (298)
T ss_dssp             CEEEEECTTSHHHHHHHHHTTTTSEEEE-ECTTCSS------------------SCCCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEE-EECCCcc------------------ccCcCCCHHHHHHHHHHcCCCEEEEe
Confidence            4799999999999999999998887554 4443321                  2479999999999887  46999999


Q ss_pred             cccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccccchHHH
Q 025755           85 ACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYCL  164 (248)
Q Consensus        85 ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~  164 (248)
                      ||..........+...++.|+.++.++++++++.+ .+++++||...++...    ..+.+|+.+..|      .+.|+.
T Consensus        62 Aa~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~~ss~~~~~~~~----~~~~~E~~~~~p------~~~y~~  130 (298)
T d1n2sa_          62 AAHTAVDKAESEPELAQLLNATSVEAIAKAANETG-AWVVHYSTDYVFPGTG----DIPWQETDATSP------LNVYGK  130 (298)
T ss_dssp             CCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTT-CEEEEEEEGGGSCCCT----TCCBCTTSCCCC------SSHHHH
T ss_pred             cccccccccccCccccccccccccccchhhhhccc-cccccccccccccCCC----CCCCccccccCC------CchHhh
Confidence            99776544455557788999999999999999887 4788888866544332    556777766554      456999


Q ss_pred             HHHHHHHHHHHHHHhCCccEEEEccCeeecCCCCCCCCccHHHHHHHHcCCCC
Q 025755          165 AKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKGFFF  217 (248)
Q Consensus       165 sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~~~~l  217 (248)
                      +|..+|.....+.    .+..+++++..+......   ....+...+..+..+
T Consensus       131 ~k~~~e~~~~~~~----~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~  176 (298)
T d1n2sa_         131 TKLAGEKALQDNC----PKHLIFRTSWVYAGKGNN---FAKTMLRLAKERQTL  176 (298)
T ss_dssp             HHHHHHHHHHHHC----SSEEEEEECSEECSSSCC---HHHHHHHHHHHCSEE
T ss_pred             hhhhhhhhHHhhh----cccccccccceeeccCCc---cchhhhhhhccccee
Confidence            9999998776654    334566666666543321   223344444444433

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.84  E-value=1.6e-20  Score=148.29  Aligned_cols=166  Identities=19%  Similarity=0.164  Sum_probs=118.2

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEE--EEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEE
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHG--TVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVF   82 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~--~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi   82 (248)
                      .|++||||||||+||+++++.|+++|++|.+  +.|+.++     ...   ...+++++.+|+.|.+++.++++++|.||
T Consensus         2 ~~~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~-----~~~---~~~~~~~~~~d~~~~~~~~~~~~~~d~vi   73 (252)
T d2q46a1           2 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQG-----KEK---IGGEADVFIGDITDADSINPAFQGIDALV   73 (252)
T ss_dssp             SCCEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHH-----HHH---TTCCTTEEECCTTSHHHHHHHHTTCSEEE
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHH-----HHh---ccCCcEEEEeeeccccccccccccceeeE
Confidence            4689999999999999999999999976544  4555421     111   13568899999999999999999999999


Q ss_pred             EccccCCCCCC-------------CCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCC
Q 025755           83 HVACPVPVGKV-------------PNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECW  149 (248)
Q Consensus        83 ~~ag~~~~~~~-------------~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~  149 (248)
                      |+|+.......             ...+.....+|+.++.+++..+.....+...+.|+.....+...            
T Consensus        74 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~------------  141 (252)
T d2q46a1          74 ILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNPDHP------------  141 (252)
T ss_dssp             ECCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTCTTCG------------
T ss_pred             EEEeeccccccccchhhhhhcccccccchhhhccccccceeeccccccccccccccccccccCCCCcc------------
Confidence            99986542211             12234566889999999999999888889999987553222110            


Q ss_pred             CchhhhccccchHHHHHHHHHHHHHHHHHhCCccEEEEccCeeecCCCC
Q 025755          150 SDEEFCKATENYYCLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQ  198 (248)
Q Consensus       150 ~~~~~~~~~~~~Y~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~  198 (248)
                      ...    .....|...    +.+...+....+++++++||+++|||...
T Consensus       142 ~~~----~~~~~~~~~----~~~~~~~~~~~~~~~~ilRp~~v~g~~~~  182 (252)
T d2q46a1         142 LNK----LGNGNILVW----KRKAEQYLADSGTPYTIIRAGGLLDKEGG  182 (252)
T ss_dssp             GGG----GGGCCHHHH----HHHHHHHHHHSSSCEEEEEECEEECSCTT
T ss_pred             ccc----ccccchhhh----hhhhhhhhhcccccceeecceEEECCCcc
Confidence            000    001113333    34444555667899999999999999754

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.84  E-value=3.7e-21  Score=150.01  Aligned_cols=150  Identities=18%  Similarity=0.175  Sum_probs=109.9

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCC--eEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHh-CCCCEEE
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGY--MVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAAT-AGCTGVF   82 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~-~~id~vi   82 (248)
                      .|+||||||||+||++++++|+++|+  +|++..|++..           ...++   ..+..|..++...+ ..+|.||
T Consensus         2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~-----------~~~~~---~~~~~d~~~~~~~~~~~~d~vi   67 (212)
T d2a35a1           2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA-----------EHPRL---DNPVGPLAELLPQLDGSIDTAF   67 (212)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC-----------CCTTE---ECCBSCHHHHGGGCCSCCSEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchh-----------hcccc---cccccchhhhhhccccchheee
Confidence            58999999999999999999999998  56666665421           01223   34444544444433 4589999


Q ss_pred             EccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccccchH
Q 025755           83 HVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYY  162 (248)
Q Consensus        83 ~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y  162 (248)
                      |++|.....  ......+.+.|+.++.+++++|++.+.+++|++||..+....                       .+.|
T Consensus        68 ~~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~a~~~~v~~~i~~Ss~~~~~~~-----------------------~~~y  122 (212)
T d2a35a1          68 CCLGTTIKE--AGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADAKS-----------------------SIFY  122 (212)
T ss_dssp             ECCCCCHHH--HSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTTC-----------------------SSHH
T ss_pred             eeeeeeccc--cccccccccchhhhhhhccccccccccccccccccccccccc-----------------------ccch
Confidence            999864321  122357889999999999999999999999999996643211                       2339


Q ss_pred             HHHHHHHHHHHHHHHHhCCc-cEEEEccCeeecCCCC
Q 025755          163 CLAKTIAEIQALEYAKRGEL-DIVTVCPSIVIGPMLQ  198 (248)
Q Consensus       163 ~~sK~~~e~l~~~~~~~~~i-~v~~vrpg~i~g~~~~  198 (248)
                      +.+|..+|..+.+    .+. +++++||+.+|||...
T Consensus       123 ~~~K~~~E~~l~~----~~~~~~~I~Rp~~v~G~~~~  155 (212)
T d2a35a1         123 NRVKGELEQALQE----QGWPQLTIARPSLLFGPREE  155 (212)
T ss_dssp             HHHHHHHHHHHTT----SCCSEEEEEECCSEESTTSC
T ss_pred             hHHHHHHhhhccc----cccccceeeCCcceeCCccc
Confidence            9999999976653    235 5899999999998754

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=99.83  E-value=1.3e-21  Score=160.37  Aligned_cols=208  Identities=13%  Similarity=-0.007  Sum_probs=134.7

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhc-CCCCCeEEEEccCCCHHHHHHHhCCCCEEEE
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLE-GASENLQLFKTDLLDYEALCAATAGCTGVFH   83 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~   83 (248)
                      +++|||||||||+||++++++|+++|++|+++.|+............. ....++.++++|+.|.+.+.+.+++++.++|
T Consensus         2 ~k~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d~~~~~~~~~~~~~~~~   81 (312)
T d1qyda_           2 KKSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVIS   81 (312)
T ss_dssp             CCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhccCCcEEEEeecccchhhhhhccCcchhhh
Confidence            456799999999999999999999999999999976433222212111 1235789999999999999999999999999


Q ss_pred             ccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccccchHH
Q 025755           84 VACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYC  163 (248)
Q Consensus        84 ~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~  163 (248)
                      +++....           ..|..+..++++++.+.+..++|+.||.+. .+..         +..+.      .    |.
T Consensus        82 ~~~~~~~-----------~~~~~~~~~~l~~a~~~~~~~~v~~Ss~g~-~~~~---------~~~~~------~----~~  130 (312)
T d1qyda_          82 ALAGGVL-----------SHHILEQLKLVEAIKEAGNIKRFLPSEFGM-DPDI---------MEHAL------Q----PG  130 (312)
T ss_dssp             CCCCSSS-----------STTTTTHHHHHHHHHHSCCCSEEECSCCSS-CTTS---------CCCCC------S----ST
T ss_pred             hhhhccc-----------ccchhhhhHHHHHHHHhcCCcEEEEeeccc-cCCC---------ccccc------c----hh
Confidence            9875332           345566778899999987778888887542 2111         11111      1    22


Q ss_pred             HHHHHHHHHHHHHHHhCCccEEEEccCeeecCCCCCCCCccHHHHHHHHcCCCCCCCCCchhhhhhhhhccceeEEEeec
Q 025755          164 LAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKGFFFTTPSHSYMLERTLVLNQGVRLYRCKI  243 (248)
Q Consensus       164 ~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~l~vd~g~~~~~~~~  243 (248)
                      .++...+..+.++....+++++++||+.+||+........   .......+..+..+..+....+.++++|-..++..++
T Consensus       131 ~~~~~~~~~~~~~~~~~~~~~~i~r~~~~~g~~~~~~~~~---~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~l  207 (312)
T d1qyda_         131 SITFIDKRKVRRAIEAASIPYTYVSSNMFAGYFAGSLAQL---DGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSI  207 (312)
T ss_dssp             THHHHHHHHHHHHHHHTTCCBCEEECCEEHHHHTTTSSCT---TCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHT
T ss_pred             hhhhHHHHHHHHhhcccccceEEeccceeecCCccchhhH---HHHhhhcccccccccccccccceeeHHHHHHHHHHHh
Confidence            3333344444455566679999999999999754332111   0011112222333333444455677777766665555


Q ss_pred             cCC
Q 025755          244 QIP  246 (248)
Q Consensus       244 ~~p  246 (248)
                      ..|
T Consensus       208 ~~~  210 (312)
T d1qyda_         208 DDP  210 (312)
T ss_dssp             TCG
T ss_pred             cCc
Confidence            443

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=99.80  E-value=9.7e-21  Score=154.24  Aligned_cols=201  Identities=13%  Similarity=0.062  Sum_probs=127.7

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHH-hhhhcC-CCCCeEEEEccCCCHHHHHHHhCCCCEEE
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAH-LKKLEG-ASENLQLFKTDLLDYEALCAATAGCTGVF   82 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~-~~~~~~-~~~~~~~~~~Di~d~~~~~~~~~~id~vi   82 (248)
                      .+||||||||||+||++++++|+++|++|++++|+........ ...+.. ....+.++.+|+.+.+.+.+.++..+.++
T Consensus         2 ~kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~vi   81 (307)
T d1qyca_           2 SRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVVI   81 (307)
T ss_dssp             CCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhccCCcEEEEeecccchhhhhhhhhceeee
Confidence            3689999999999999999999999999999999765322111 111111 13568899999999999999999999999


Q ss_pred             EccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccccchH
Q 025755           83 HVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYY  162 (248)
Q Consensus        83 ~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y  162 (248)
                      |+++...               ..++.++++++...+..++++.||.......           .....+      ...+
T Consensus        82 ~~~~~~~---------------~~~~~~~~~a~~~~~~~~~~~~s~~~~~~~~-----------~~~~~~------~~~~  129 (307)
T d1qyca_          82 STVGSLQ---------------IESQVNIIKAIKEVGTVKRFFPSEFGNDVDN-----------VHAVEP------AKSV  129 (307)
T ss_dssp             ECCCGGG---------------SGGGHHHHHHHHHHCCCSEEECSCCSSCTTS-----------CCCCTT------HHHH
T ss_pred             ecccccc---------------cchhhHHHHHHHHhccccceeeecccccccc-----------cccccc------cccc
Confidence            9986432               2345578888888888888888874322111           111111      1114


Q ss_pred             HHHHHHHHHHHHHHHHhCCccEEEEccCeeecCCCCCCCCccHHHHHHHHcCCCCCCCCCchhhhhhhhhccceeEEEee
Q 025755          163 CLAKTIAEIQALEYAKRGELDIVTVCPSIVIGPMLQPTINTSSLLLLGFLKGFFFTTPSHSYMLERTLVLNQGVRLYRCK  242 (248)
Q Consensus       163 ~~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~l~vd~g~~~~~~~  242 (248)
                      ...+...+    .+..+.+++++++||+++||+......    .++.....+........+....+.+++||...++..+
T Consensus       130 ~~~~~~~~----~~~~~~~~~~~i~r~~~v~g~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~  201 (307)
T d1qyca_         130 FEVKAKVR----RAIEAEGIPYTYVSSNCFAGYFLRSLA----QAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKA  201 (307)
T ss_dssp             HHHHHHHH----HHHHHHTCCBEEEECCEEHHHHTTTTT----CTTCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTT
T ss_pred             cccccccc----chhhccCCCceecccceecCCCccchh----hhhhhhhhcccceeeecccccccCCcHHHHHHHHHHH
Confidence            44443433    333445699999999999997643211    1111122222222233333444567777766666555


Q ss_pred             ccC
Q 025755          243 IQI  245 (248)
Q Consensus       243 ~~~  245 (248)
                      +..
T Consensus       202 l~~  204 (307)
T d1qyca_         202 VDD  204 (307)
T ss_dssp             SSC
T ss_pred             hcC
Confidence            543

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=99.72  E-value=1.3e-16  Score=132.99  Aligned_cols=153  Identities=19%  Similarity=0.172  Sum_probs=113.2

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHH-HHHHHhCCCCEEEE
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYE-ALCAATAGCTGVFH   83 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~-~~~~~~~~id~vi~   83 (248)
                      +.|+|+||||||+||++++++|+++|++|+++.|+........+..    ..++.++++|++|.. .+..+++.+|.+++
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~----~~~v~~~~gD~~d~~~~~~~a~~~~~~~~~   77 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQA----IPNVTLFQGPLLNNVPLMDTLFEGAHLAFI   77 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHT----STTEEEEESCCTTCHHHHHHHHTTCSEEEE
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhhhhhcc----cCCCEEEEeeCCCcHHHHHHHhcCCceEEe
Confidence            5799999999999999999999999999999999876443332221    357899999999854 57788899998887


Q ss_pred             ccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEeccceeccCCCCCCCCccCCCCCCchhhhccccchHH
Q 025755           84 VACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSIGAVMLNPNWPKGQVMDEECWSDEEFCKATENYYC  163 (248)
Q Consensus        84 ~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~  163 (248)
                      +....            ...++..+.++++++.+.+..++|+.||...........                   ...|.
T Consensus        78 ~~~~~------------~~~~~~~~~~~~~aa~~agv~~~v~~Ss~~~~~~~~~~~-------------------~~~~~  126 (350)
T d1xgka_          78 NTTSQ------------AGDEIAIGKDLADAAKRAGTIQHYIYSSMPDHSLYGPWP-------------------AVPMW  126 (350)
T ss_dssp             CCCST------------TSCHHHHHHHHHHHHHHHSCCSEEEEEECCCGGGTSSCC-------------------CCTTT
T ss_pred             ecccc------------cchhhhhhhHHHHHHHHhCCCceEEEeeccccccCCccc-------------------chhhh
Confidence            65321            234677889999999999988999998865333221110                   11266


Q ss_pred             HHHHHHHHHHHHHHHhCCccEEEEccCeeecCC
Q 025755          164 LAKTIAEIQALEYAKRGELDIVTVCPSIVIGPM  196 (248)
Q Consensus       164 ~sK~~~e~l~~~~~~~~~i~v~~vrpg~i~g~~  196 (248)
                      .+|...+..    ....++++.++||+.+++..
T Consensus       127 ~~k~~~~~~----~~~~~~~~~~vr~~~~~~~~  155 (350)
T d1xgka_         127 APKFTVENY----VRQLGLPSTFVYAGIYNNNF  155 (350)
T ss_dssp             HHHHHHHHH----HHTSSSCEEEEEECEEGGGC
T ss_pred             hhHHHHHHH----HHhhccCceeeeeceeeccc
Confidence            777655543    44456899999999987753

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=99.64  E-value=5.4e-17  Score=124.12  Aligned_cols=108  Identities=13%  Similarity=-0.006  Sum_probs=80.9

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEE
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVF   82 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi   82 (248)
                      +|++|+++||||+||||+++++.|+++|++|++++|+.++.. ...+.+.. ..++....+|+.|.++++++++++|+||
T Consensus        20 ~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~-~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~iDili   97 (191)
T d1luaa1          20 SVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQ-AAADSVNK-RFKVNVTAAETADDASRAEAVKGAHFVF   97 (191)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHH-HHHHHHHH-HHTCCCEEEECCSHHHHHHHTTTCSEEE
T ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHH-HHHHHHHh-ccchhhhhhhcccHHHHHHHhcCcCeee
Confidence            589999999999999999999999999999999999975332 22222222 2355678899999999999999999999


Q ss_pred             EccccCCCCCCCCccccchhhhHHHHHHHH
Q 025755           83 HVACPVPVGKVPNPEVQLIDPAVVGTKNVL  112 (248)
Q Consensus        83 ~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~  112 (248)
                      ||||........+.|...+++|+.+..+..
T Consensus        98 n~Ag~g~~~~~~e~~~~~~~~nv~~~~~~~  127 (191)
T d1luaa1          98 TAGAIGLELLPQAAWQNESSIEIVADYNAQ  127 (191)
T ss_dssp             ECCCTTCCCBCHHHHHTCTTCCEEEECCCS
T ss_pred             ecCccccccCCHHHHHhhhcceeehhHhhH
Confidence            999964432223344455666655544443

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.47  E-value=6.8e-07  Score=63.69  Aligned_cols=114  Identities=18%  Similarity=0.086  Sum_probs=76.5

Q ss_pred             EEEEEcCccHHHHHHHHHHHHCCC--eEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEEcc
Q 025755            8 RVCVTGAGGYIASWLVKYLLLKGY--MVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFHVA   85 (248)
Q Consensus         8 ~vlVtG~~g~iG~~~~~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~~a   85 (248)
                      ||.|+||+|.+|++++..|+.+|.  ++++++.++.+...   ..+... ........-+ ...+..+.+++.|+||..|
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a---~Dl~~~-~~~~~~~~~~-~~~~~~~~~~~aDivVita   76 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVA---ADLSHI-ETRATVKGYL-GPEQLPDCLKGCDVVVIPA   76 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHH---HHHTTS-SSSCEEEEEE-SGGGHHHHHTTCSEEEECC
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchhh---HHHhhh-hhhcCCCeEE-cCCChHHHhCCCCEEEECC
Confidence            799999999999999999998884  68888876532211   122111 1111111112 2345566778999999999


Q ss_pred             ccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEec
Q 025755           86 CPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSS  128 (248)
Q Consensus        86 g~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS  128 (248)
                      |.....  ...-.+.++.|....+.+++.+.+.+...+|.+-|
T Consensus        77 g~~~~~--g~sR~~ll~~N~~i~~~i~~~i~~~~p~~iiivvt  117 (144)
T d1mlda1          77 GVPRKP--GMTRDDLFNTNATIVATLTAACAQHCPDAMICIIS  117 (144)
T ss_dssp             SCCCCT--TCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred             CcCCCC--CCCcchHHHHHHHHHHHHHHHHHhcCCCeEEEEec
Confidence            964432  22336789999999999999999986555555433

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=98.42  E-value=8.2e-07  Score=65.27  Aligned_cols=74  Identities=23%  Similarity=0.206  Sum_probs=58.4

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEEcc
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFHVA   85 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~~a   85 (248)
                      .|+|+|.|+ |.+|+.+++.|.++|++|++++|+.+..     +.+....+.......+..+.......+...|.++.+.
T Consensus         2 ~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a-----~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~   75 (182)
T d1e5qa1           2 TKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESA-----KKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISLI   75 (182)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHH-----HHHHTTCTTEEEEECCTTCHHHHHHHHTTSSEEEECS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHH-----HHHHhcccccccccccccchhhhHhhhhccceeEeec
Confidence            589999987 9999999999999999999999997422     2223334556666778888888888888888888654

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=98.37  E-value=9.1e-07  Score=62.09  Aligned_cols=95  Identities=14%  Similarity=0.054  Sum_probs=67.5

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHH-hCCCCEEEEcc
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAA-TAGCTGVFHVA   85 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~-~~~id~vi~~a   85 (248)
                      |+|+|.|+ |.+|+.+++.|.+.|++|++++.+++... . ...    .-+...+.+|.+|++.++++ +++.|.++-+.
T Consensus         1 M~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~-~-~~~----~~~~~vi~Gd~~~~~~l~~~~i~~a~~vv~~t   73 (132)
T d1lssa_           1 MYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICK-K-ASA----EIDALVINGDCTKIKTLEDAGIEDADMYIAVT   73 (132)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHH-H-HHH----HCSSEEEESCTTSHHHHHHTTTTTCSEEEECC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhh-h-hhh----hhhhhhccCcccchhhhhhcChhhhhhhcccC
Confidence            58999998 99999999999999999999998864211 1 111    12567899999999999987 46788887543


Q ss_pred             ccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEE
Q 025755           86 CPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVV  125 (248)
Q Consensus        86 g~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~  125 (248)
                      .        +     .+.|+..+.    .+++.+.+++|-
T Consensus        74 ~--------~-----d~~N~~~~~----~~k~~~~~~iI~   96 (132)
T d1lssa_          74 G--------K-----EEVNLMSSL----LAKSYGINKTIA   96 (132)
T ss_dssp             S--------C-----HHHHHHHHH----HHHHTTCCCEEE
T ss_pred             C--------c-----HHHHHHHHH----HHHHcCCceEEE
Confidence            1        1     155655333    445566666653

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=98.27  E-value=5.2e-06  Score=59.08  Aligned_cols=114  Identities=11%  Similarity=0.119  Sum_probs=73.1

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCC--CeEEEEEcCCCchhhHH--hhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCE
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKG--YMVHGTVRDPCDEKNAH--LKKLEGASENLQLFKTDLLDYEALCAATAGCTG   80 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g--~~V~~~~r~~~~~~~~~--~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~   80 (248)
                      +++||.|.|+ |.+|..++..|+.+|  .+|++++++....+-..  +...............|.   +    .++++|+
T Consensus         4 ~~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~---~----~~~~adi   75 (146)
T d1ez4a1           4 NHQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEY---S----DCKDADL   75 (146)
T ss_dssp             TBCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCG---G----GGTTCSE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeeccH---H----HhccccE
Confidence            4679999995 999999999999988  58999998763222111  111111222334445553   2    2568999


Q ss_pred             EEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEec
Q 025755           81 VFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSS  128 (248)
Q Consensus        81 vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS  128 (248)
                      ||.+||.....  ...-.+.++.|..-.+.+++.+.+.....++.+-|
T Consensus        76 vvitag~~~~~--g~~r~~l~~~N~~i~~~~~~~i~~~~p~aivivvt  121 (146)
T d1ez4a1          76 VVITAGAPQKP--GESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAA  121 (146)
T ss_dssp             EEECCCC------------CHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             EEEecccccCC--CCCHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEeC
Confidence            99999865432  22235778999999999999999987655555543

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=98.22  E-value=1.4e-05  Score=56.68  Aligned_cols=115  Identities=10%  Similarity=0.040  Sum_probs=74.6

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCC--CeEEEEEcCCCchh----hHHhhhhc-CCCCCeEEEEccCCCHHHHHHHhCCCC
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKG--YMVHGTVRDPCDEK----NAHLKKLE-GASENLQLFKTDLLDYEALCAATAGCT   79 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g--~~V~~~~r~~~~~~----~~~~~~~~-~~~~~~~~~~~Di~d~~~~~~~~~~id   79 (248)
                      +||.|+||+|.+|..++..|+.+|  -++.+++++.....    ...+.... ...........--.|.    +.+++.|
T Consensus         1 MKV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~d~----~~l~~aD   76 (145)
T d1hyea1           1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDENL----RIIDESD   76 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCG----GGGTTCS
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhcccccccCCccccCCcchH----HHhccce
Confidence            479999999999999999999988  48999988753111    11122111 1122333222111122    2456899


Q ss_pred             EEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEe
Q 025755           80 GVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVS  127 (248)
Q Consensus        80 ~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vS  127 (248)
                      +||-+||......  ..-.+.++.|..-.+.+++...+.....++.+|
T Consensus        77 vVVitAG~~~~~g--~sR~dl~~~Na~iv~~i~~~i~~~~~~~iivVt  122 (145)
T d1hyea1          77 VVIITSGVPRKEG--MSRMDLAKTNAKIVGKYAKKIAEICDTKIFVIT  122 (145)
T ss_dssp             EEEECCSCCCCTT--CCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECS
T ss_pred             EEEEecccccCCC--CChhhhhhhhHHHHHHHHHHHhccCCCeEEEEc
Confidence            9999999744322  222568899999999999999888655555453

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=98.20  E-value=1.8e-05  Score=56.39  Aligned_cols=118  Identities=15%  Similarity=0.197  Sum_probs=79.0

Q ss_pred             CCCCCCcEEEEEcCccHHHHHHHHHHHHCCC--eEEEEEcCCCchhh--HHhhhhcC-CCCCeEEEEccCCCHHHHHHHh
Q 025755            1 MSGEDKERVCVTGAGGYIASWLVKYLLLKGY--MVHGTVRDPCDEKN--AHLKKLEG-ASENLQLFKTDLLDYEALCAAT   75 (248)
Q Consensus         1 m~~l~~k~vlVtG~~g~iG~~~~~~l~~~g~--~V~~~~r~~~~~~~--~~~~~~~~-~~~~~~~~~~Di~d~~~~~~~~   75 (248)
                      |.+..++||.|+|+ |.+|+.++..|+..|.  ++++++++.....-  ..+..... ..........|.       +.+
T Consensus         1 m~~~~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~-------~~l   72 (148)
T d1ldna1           1 MKNNGGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDY-------DDC   72 (148)
T ss_dssp             CTTTTSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCG-------GGT
T ss_pred             CCCCCCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECCH-------HHh
Confidence            66667889999996 9999999999999875  79999887642211  11221111 122344444443       236


Q ss_pred             CCCCEEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCC-CEEEEEec
Q 025755           76 AGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKV-KRVVVVSS  128 (248)
Q Consensus        76 ~~id~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~-~~iV~vSS  128 (248)
                      ++.|+||.+||.....  ...-.+.++.|..-.+.+++.+.+... ..+|.+|-
T Consensus        73 ~daDvvvitag~~~~~--~~~R~dl~~~N~~i~~~i~~~i~~~~p~a~~ivvtN  124 (148)
T d1ldna1          73 RDADLVVICAGANQKP--GETRLDLVDKNIAIFRSIVESVMASGFQGLFLVATN  124 (148)
T ss_dssp             TTCSEEEECCSCCCCT--TTCSGGGHHHHHHHHHHHHHHHHHHTCCSEEEECSS
T ss_pred             ccceeEEEeccccccc--CcchhHHHHHHHHHHHHHHHHHHhhCCCceEEEecC
Confidence            6899999999875432  223367889999999999999988854 35555543

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=98.11  E-value=7.8e-05  Score=52.70  Aligned_cols=115  Identities=17%  Similarity=0.018  Sum_probs=73.2

Q ss_pred             cEEEEEcCccHHHHHHHHHHHH-CC--CeEEEEEcCCCchhhHHhhhhcCCCCCeE-EEEccCCCHHHHHHHhCCCCEEE
Q 025755            7 ERVCVTGAGGYIASWLVKYLLL-KG--YMVHGTVRDPCDEKNAHLKKLEGASENLQ-LFKTDLLDYEALCAATAGCTGVF   82 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~-~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~Di~d~~~~~~~~~~id~vi   82 (248)
                      +||.|+|++|.+|++++-.|+. .+  .++.+++..+. . ......+........ .....-.+.    +.+++.|+||
T Consensus         1 MKV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~~-~-~g~a~Dl~h~~~~~~~~~~~~~~~~----~~~~~aDvvv   74 (145)
T d2cmda1           1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPV-T-PGVAVDLSHIPTAVKIKGFSGEDAT----PALEGADVVL   74 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSSTT-H-HHHHHHHHTSCSSCEEEEECSSCCH----HHHTTCSEEE
T ss_pred             CEEEEEcCCChHHHHHHHHHHhCCCCCcEEEEeccccc-c-hhHHHHHHCCccccCCcEEEcCCCc----cccCCCCEEE
Confidence            4899999999999999988764 33  68888887542 2 211112222111111 112222232    2467899999


Q ss_pred             EccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCC-EEEEEecc
Q 025755           83 HVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVK-RVVVVSSI  129 (248)
Q Consensus        83 ~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~-~iV~vSS~  129 (248)
                      .+||.....  ...-.++++.|..-.+.+.+.+.+.... .+|.+|..
T Consensus        75 itaG~~~k~--g~~R~dl~~~N~~i~~~v~~~i~~~~p~aivivvtNP  120 (145)
T d2cmda1          75 ISAGVRRKP--GMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIITNP  120 (145)
T ss_dssp             ECCSCCCCT--TCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSSS
T ss_pred             ECCCccCCC--CcchhhHHHHHHHHHHHHHHHHHhhCCCcEEEEccCC
Confidence            999975432  2233678899999999999999988543 45666543

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.10  E-value=1.2e-06  Score=65.17  Aligned_cols=35  Identities=23%  Similarity=0.157  Sum_probs=32.3

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCC
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPC   41 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~   41 (248)
                      |||.|+||+|++|+++++.|+++|++|++.+|+++
T Consensus         1 Mki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e   35 (212)
T d1jaya_           1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREE   35 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHH
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHH
Confidence            46889999999999999999999999999999874

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=98.08  E-value=1.2e-05  Score=61.31  Aligned_cols=78  Identities=8%  Similarity=-0.040  Sum_probs=57.1

Q ss_pred             CCCCCCcEEEEEcC----------------ccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEcc
Q 025755            1 MSGEDKERVCVTGA----------------GGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTD   64 (248)
Q Consensus         1 m~~l~~k~vlVtG~----------------~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D   64 (248)
                      |.+|+||+||||+|                ||..|.++++++..+|++|+++.-....          .....+..+.. 
T Consensus         1 ~~dl~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~----------~~p~~~~~~~~-   69 (223)
T d1u7za_           1 VNDLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSL----------PTPPFVKRVDV-   69 (223)
T ss_dssp             CCTTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCC----------CCCTTEEEEEC-
T ss_pred             CcccCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhccccc----------Cccccccccee-
Confidence            56799999999987                6899999999999999999998754421          11234555543 


Q ss_pred             CCCHHH----HHHHhCCCCEEEEccccCCC
Q 025755           65 LLDYEA----LCAATAGCTGVFHVACPVPV   90 (248)
Q Consensus        65 i~d~~~----~~~~~~~id~vi~~ag~~~~   90 (248)
                       ...++    +...++..|++|++|++...
T Consensus        70 -~t~~~m~~~~~~~~~~~D~~i~aAAvsDf   98 (223)
T d1u7za_          70 -MTALEMEAAVNASVQQQNIFIGCAAVADY   98 (223)
T ss_dssp             -CSHHHHHHHHHHHGGGCSEEEECCBCCSE
T ss_pred             -hhhHHHHHHHHhhhccceeEeeeechhhh
Confidence             33333    44445688999999998754

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=98.08  E-value=1.5e-05  Score=58.90  Aligned_cols=84  Identities=15%  Similarity=0.056  Sum_probs=62.6

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCC-eEEEEEcCCCchhh--HHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCC
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGY-MVHGTVRDPCDEKN--AHLKKLEGASENLQLFKTDLLDYEALCAATAGCT   79 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id   79 (248)
                      ++++|+|+|.|+ ||.|++++..|++.|. +++++.|+.+....  ...+.+.. .........|+.+.+++.......|
T Consensus        15 ~l~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~d   92 (182)
T d1vi2a1          15 DIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNE-NTDCVVTVTDLADQQAFAEALASAD   92 (182)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHH-HSSCEEEEEETTCHHHHHHHHHTCS
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHh-hcCcceEeeecccccchhhhhcccc
Confidence            367899999998 6899999999999987 68888998753322  12222222 2234456789999999988889999


Q ss_pred             EEEEccccC
Q 025755           80 GVFHVACPV   88 (248)
Q Consensus        80 ~vi~~ag~~   88 (248)
                      +|||+..+.
T Consensus        93 iiIN~Tp~G  101 (182)
T d1vi2a1          93 ILTNGTKVG  101 (182)
T ss_dssp             EEEECSSTT
T ss_pred             eeccccCCc
Confidence            999997643

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=98.00  E-value=1.2e-05  Score=59.34  Aligned_cols=77  Identities=23%  Similarity=0.202  Sum_probs=53.4

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC--CCCEEE
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA--GCTGVF   82 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~--~id~vi   82 (248)
                      ++.+|+|+||+|++|...++.....|++|+++.++.+  +.+..+..   ..+..+..-|-...+.+.+...  ++|+|+
T Consensus        29 ~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~--~~~~~~~~---Ga~~vi~~~~~~~~~~~~~~~~~~Gvd~v~  103 (182)
T d1v3va2          29 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDE--KIAYLKQI---GFDAAFNYKTVNSLEEALKKASPDGYDCYF  103 (182)
T ss_dssp             SSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHH--HHHHHHHT---TCSEEEETTSCSCHHHHHHHHCTTCEEEEE
T ss_pred             CCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHH--HHHHHHhh---hhhhhcccccccHHHHHHHHhhcCCCceeE
Confidence            4789999999999999999999999999999998753  22333322   2233333344444444444433  589999


Q ss_pred             Eccc
Q 025755           83 HVAC   86 (248)
Q Consensus        83 ~~ag   86 (248)
                      ++.|
T Consensus       104 D~vG  107 (182)
T d1v3va2         104 DNVG  107 (182)
T ss_dssp             ESSC
T ss_pred             EecC
Confidence            9886

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=98.00  E-value=7e-06  Score=57.40  Aligned_cols=71  Identities=14%  Similarity=0.069  Sum_probs=54.0

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHH-hCCCCEEEEcc
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAA-TAGCTGVFHVA   85 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~-~~~id~vi~~a   85 (248)
                      |+++|.|. |.+|+.+++.|.++|++|++++.+++.     .+.+..  .....+.+|.++++.++++ ++++|.||-..
T Consensus         1 k~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~~-----~~~~~~--~~~~~~~gd~~~~~~l~~a~i~~a~~vi~~~   72 (134)
T d2hmva1           1 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEK-----VNAYAS--YATHAVIANATEENELLSLGIRNFEYVIVAI   72 (134)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHH-----HHHTTT--TCSEEEECCTTCTTHHHHHTGGGCSEEEECC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHHH-----HHHHHH--hCCcceeeecccchhhhccCCccccEEEEEc
Confidence            56788866 789999999999999999999987631     222222  2346778999999999887 56788777544

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=97.98  E-value=6.2e-06  Score=59.28  Aligned_cols=118  Identities=16%  Similarity=0.085  Sum_probs=74.5

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCC-eEEEEEcCCCchhhHH--hhhhcC-CCCCeEEEEccCCCHHHHHHHhCCCC
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGY-MVHGTVRDPCDEKNAH--LKKLEG-ASENLQLFKTDLLDYEALCAATAGCT   79 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~~~--~~~~~~-~~~~~~~~~~Di~d~~~~~~~~~~id   79 (248)
                      .+.+||.|+|+ |.+|+.++..|+..+. ++++++.+.....-..  +..... ..........     ...+..+++.|
T Consensus         5 ~k~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~-----~~~~~~~~~ad   78 (154)
T d1pzga1           5 QRRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAE-----YSYEAALTGAD   78 (154)
T ss_dssp             SCCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEE-----CSHHHHHTTCS
T ss_pred             cCCCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccCCeeEEecc-----CchhhhhcCCC
Confidence            45689999997 9999999998888774 8888887764322111  111110 0111111111     12345567899


Q ss_pred             EEEEccccCCCCCCC---CccccchhhhHHHHHHHHHHHHhcCCCEEEEEe
Q 025755           80 GVFHVACPVPVGKVP---NPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVS  127 (248)
Q Consensus        80 ~vi~~ag~~~~~~~~---~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vS  127 (248)
                      +||-+||........   ..-.+.++.|..-.+.+++.+.+.+...++.+-
T Consensus        79 iVvitag~~~~~g~~~~~~tR~~l~~~n~~iv~~i~~~i~~~~p~aiviiv  129 (154)
T d1pzga1          79 CVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIVV  129 (154)
T ss_dssp             EEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEEC
T ss_pred             eEEEecccccCCCCCCcccchhhhhhhhHHHHHHHHHHHHhcCCCcEEEEe
Confidence            999999876532111   122567889999999999999988665555543

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=97.95  E-value=7.9e-05  Score=52.43  Aligned_cols=111  Identities=16%  Similarity=0.055  Sum_probs=73.5

Q ss_pred             EEEEEcCccHHHHHHHHHHHHCCC--eEEEEEcCCCc-hhh---HHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEE
Q 025755            8 RVCVTGAGGYIASWLVKYLLLKGY--MVHGTVRDPCD-EKN---AHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGV   81 (248)
Q Consensus         8 ~vlVtG~~g~iG~~~~~~l~~~g~--~V~~~~r~~~~-~~~---~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~v   81 (248)
                      ||.|+|++|.+|..++-.|+.++.  ++++++.+..+ ..+   ..+...............|.   ++    +++.|+|
T Consensus         2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~~---~~----~~~aDiV   74 (142)
T d1o6za1           2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGY---ED----TAGSDVV   74 (142)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCG---GG----GTTCSEE
T ss_pred             eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEeeCCH---HH----hhhcCEE
Confidence            799999999999999999999885  78888764321 111   11111112233444444443   33    4689999


Q ss_pred             EEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCC-EEEEEe
Q 025755           82 FHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVK-RVVVVS  127 (248)
Q Consensus        82 i~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~-~iV~vS  127 (248)
                      |-.||.....  ...-.+.++.|..-.+.+++...+...+ .++.+|
T Consensus        75 vitaG~~~~~--g~~R~dl~~~N~~I~~~i~~~i~~~~p~~i~ivvt  119 (142)
T d1o6za1          75 VITAGIPRQP--GQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTS  119 (142)
T ss_dssp             EECCCCCCCT--TCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECC
T ss_pred             EEeccccccc--CCchhhHHHHHHHHHHHHHHHHHhcCCCceEEEec
Confidence            9999964332  2223578899999999999999988654 444444

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=97.94  E-value=3.5e-05  Score=56.35  Aligned_cols=115  Identities=13%  Similarity=-0.008  Sum_probs=70.8

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCC-----C--eEEEEEcCCCchh-hHHhhhhcC-CCCCeEEEEccCCCHHHHHHHhCC
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKG-----Y--MVHGTVRDPCDEK-NAHLKKLEG-ASENLQLFKTDLLDYEALCAATAG   77 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g-----~--~V~~~~r~~~~~~-~~~~~~~~~-~~~~~~~~~~Di~d~~~~~~~~~~   77 (248)
                      .+|.||||+|.||+.++-.|++..     .  .+.+++.+..... ....-++.. .......+..  .  .+..+.+++
T Consensus        25 ~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~~~~~~~~~--~--~~~~~~~~~  100 (175)
T d7mdha1          25 VNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSI--G--IDPYEVFED  100 (175)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEE--E--SCHHHHTTT
T ss_pred             cEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhcccccccccCccc--c--ccchhhccC
Confidence            479999999999999999998743     2  3334443332111 111111111 1222222221  1  124466889


Q ss_pred             CCEEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhc-C-CCEEEEEe
Q 025755           78 CTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKA-K-VKRVVVVS  127 (248)
Q Consensus        78 id~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~-~-~~~iV~vS  127 (248)
                      .|+||-.||.....  ...-.+.++.|..-.+.+.+++.+. . -.+++.+|
T Consensus       101 aDvVvi~ag~~rkp--g~tR~Dll~~N~~I~k~~~~~i~~~a~~~~~vlvv~  150 (175)
T d7mdha1         101 VDWALLIGAKPRGP--GMERAALLDINGQIFADQGKALNAVASKNVKVLVVG  150 (175)
T ss_dssp             CSEEEECCCCCCCT--TCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             CceEEEeeccCCCC--CCcHHHHHHHHHHHHHHHHHHHHhhCCCCcEEEEec
Confidence            99999999875432  3344678899999999999999886 3 23555665

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=97.93  E-value=3.6e-05  Score=55.10  Aligned_cols=117  Identities=18%  Similarity=0.019  Sum_probs=70.5

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCC----e-E--EEEEcCCCchhhHH-hhhhc-CCCCCeEEEEccCCCHHHHHHHhC
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGY----M-V--HGTVRDPCDEKNAH-LKKLE-GASENLQLFKTDLLDYEALCAATA   76 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~----~-V--~~~~r~~~~~~~~~-~~~~~-~~~~~~~~~~~Di~d~~~~~~~~~   76 (248)
                      .+||.|+||+|.+|++++..|+..+.    . +  .++..+........ ...+. ........+...-    ...+.++
T Consensus         4 p~KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~   79 (154)
T d1y7ta1           4 PVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEATD----DPKVAFK   79 (154)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEES----CHHHHTT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhccccccccccccCC----chhhhcc
Confidence            45999999999999999999987652    1 1  12222211111111 11111 1122333333322    2346678


Q ss_pred             CCCEEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhc-C-CCEEEEEec
Q 025755           77 GCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKA-K-VKRVVVVSS  128 (248)
Q Consensus        77 ~id~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~-~-~~~iV~vSS  128 (248)
                      +.|+||-.||.....  ..+-.+.++.|..-.+.+.+.+.+. . ...++.+|-
T Consensus        80 ~advViitaG~~~~p--g~~r~dl~~~N~~i~~~~~~~i~k~a~~~~~vivvsN  131 (154)
T d1y7ta1          80 DADYALLVGAAPRKA--GMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGN  131 (154)
T ss_dssp             TCSEEEECCCCCCCT--TCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred             cccEEEeecCcCCCC--CCcHHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEecC
Confidence            999999999975432  2233578899999999999999885 3 234555553

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=97.91  E-value=1.5e-05  Score=58.21  Aligned_cols=75  Identities=15%  Similarity=0.084  Sum_probs=49.9

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEE
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFH   83 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~   83 (248)
                      +++|+|+|.|+ ||.+++++..|.+.|.+|+++.|+.++. ....+.+.. ...+..+  +..+.     ...+.|+|||
T Consensus        16 ~~~k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt~~ka-~~l~~~~~~-~~~~~~~--~~~~~-----~~~~~dliIN   85 (170)
T d1nyta1          16 RPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRA-EELAKLFAH-TGSIQAL--SMDEL-----EGHEFDLIIN   85 (170)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHH-HHHHHHTGG-GSSEEEC--CSGGG-----TTCCCSEEEE
T ss_pred             CCCCEEEEECC-cHHHHHHHHHhcccceEEEeccchHHHH-HHHHHHHhh-ccccccc--ccccc-----cccccceeec
Confidence            67899999997 7789999999999999999999987432 222222222 1233332  22211     1246899999


Q ss_pred             ccccC
Q 025755           84 VACPV   88 (248)
Q Consensus        84 ~ag~~   88 (248)
                      +....
T Consensus        86 ~Tp~G   90 (170)
T d1nyta1          86 ATSSG   90 (170)
T ss_dssp             CCSCG
T ss_pred             ccccC
Confidence            97543

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.88  E-value=2.8e-05  Score=55.73  Aligned_cols=116  Identities=22%  Similarity=0.018  Sum_probs=69.5

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCC-------eEEEEEcCCCchhhHHhh-hh-cCCCCCeEEEEccCCCHHHHHHHhC
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGY-------MVHGTVRDPCDEKNAHLK-KL-EGASENLQLFKTDLLDYEALCAATA   76 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~-------~V~~~~r~~~~~~~~~~~-~~-~~~~~~~~~~~~Di~d~~~~~~~~~   76 (248)
                      .+||.|+||+|.+|++++-.|+..+.       .++.++.+......+.+. .+ .........+..  .+  +....++
T Consensus         3 p~KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~--~~--~~~~~~~   78 (154)
T d5mdha1           3 PIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIA--TD--KEEIAFK   78 (154)
T ss_dssp             CEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEE--ES--CHHHHTT
T ss_pred             ceEEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhccccccccccccc--Cc--ccccccC
Confidence            46999999999999999999986541       344444333222111111 11 111222222222  21  2335678


Q ss_pred             CCCEEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhc-CC-CEEEEEe
Q 025755           77 GCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKA-KV-KRVVVVS  127 (248)
Q Consensus        77 ~id~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~-~~-~~iV~vS  127 (248)
                      +.|+||-.||......  ..-.+.++.|..-.+.+.+...+. +. ..+|.+|
T Consensus        79 ~~dvVVitag~~~~~g--~sr~dll~~N~~i~k~~~~~i~k~a~~~~~iivvs  129 (154)
T d5mdha1          79 DLDVAILVGSMPRRDG--MERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVG  129 (154)
T ss_dssp             TCSEEEECCSCCCCTT--CCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             CceEEEEecccCCCCC--CchhHHHHHhHHHHHHHHHHHHhhCCCceEEEEec
Confidence            8999999998755432  222567899999999999888775 33 2445555

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.87  E-value=1.7e-05  Score=57.25  Aligned_cols=73  Identities=19%  Similarity=0.165  Sum_probs=53.7

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCC-eEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEE
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGY-MVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGV   81 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~v   81 (248)
                      .+++++|+|.|+ |.+|+.+++.|...|+ +++++.|+.++. ....+.+.     ..     ..+.+++...+.+.|+|
T Consensus        21 ~l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka-~~l~~~~~-----~~-----~~~~~~~~~~l~~~Div   88 (159)
T d1gpja2          21 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERA-VELARDLG-----GE-----AVRFDELVDHLARSDVV   88 (159)
T ss_dssp             CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHH-HHHHHHHT-----CE-----ECCGGGHHHHHHTCSEE
T ss_pred             CcccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHH-HHHHHhhh-----cc-----cccchhHHHHhccCCEE
Confidence            478999999998 9999999999999998 688888886422 22222221     11     13345777788899999


Q ss_pred             EEcccc
Q 025755           82 FHVACP   87 (248)
Q Consensus        82 i~~ag~   87 (248)
                      |.+.+.
T Consensus        89 i~atss   94 (159)
T d1gpja2          89 VSATAA   94 (159)
T ss_dssp             EECCSS
T ss_pred             EEecCC
Confidence            999874

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.87  E-value=2.6e-05  Score=56.92  Aligned_cols=74  Identities=22%  Similarity=0.139  Sum_probs=50.8

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEEc
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFHV   84 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~~   84 (248)
                      ++++|+|+||+|++|...++.+...|++|++++++.+  +.+..+++   ..+..   .|..+...-....+++|+|+.+
T Consensus        27 ~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~--~~~~~~~l---Ga~~~---i~~~~~~~~~~~~~g~D~v~d~   98 (171)
T d1iz0a2          27 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPE--KLALPLAL---GAEEA---ATYAEVPERAKAWGGLDLVLEV   98 (171)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGG--GSHHHHHT---TCSEE---EEGGGHHHHHHHTTSEEEEEEC
T ss_pred             CCCEEEEEeccccchhhhhhhhccccccccccccccc--cccccccc---cccee---eehhhhhhhhhccccccccccc
Confidence            5789999999999999999999889999999988753  22333332   11211   2333333333334679999997


Q ss_pred             cc
Q 025755           85 AC   86 (248)
Q Consensus        85 ag   86 (248)
                      .|
T Consensus        99 ~G  100 (171)
T d1iz0a2          99 RG  100 (171)
T ss_dssp             SC
T ss_pred             cc
Confidence            75

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=97.86  E-value=9.6e-05  Score=52.03  Aligned_cols=111  Identities=16%  Similarity=0.158  Sum_probs=69.4

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCCC--eEEEEEcCCCchhhHH--hhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEE
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKGY--MVHGTVRDPCDEKNAH--LKKLEGASENLQLFKTDLLDYEALCAATAGCTGVF   82 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g~--~V~~~~r~~~~~~~~~--~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi   82 (248)
                      +||.|+|+ |.+|+.++-.|+.++.  ++++++++.....-..  +..............+   +.    +.+++.|+||
T Consensus         2 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~---~~----~~~~~adivv   73 (142)
T d1y6ja1           2 SKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAG---DY----SDVKDCDVIV   73 (142)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----CG----GGGTTCSEEE
T ss_pred             CeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeC---cH----HHhCCCceEE
Confidence            57888897 9999999999999875  8999998775332222  2211112223333222   22    2467899999


Q ss_pred             EccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCE-EEEEe
Q 025755           83 HVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKR-VVVVS  127 (248)
Q Consensus        83 ~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-iV~vS  127 (248)
                      -.||.....  ...-.+.++.|..-.+.+++.+.+..... +|.+|
T Consensus        74 itag~~~~~--~~~r~~l~~~N~~i~~~i~~~i~~~~p~ai~ivvt  117 (142)
T d1y6ja1          74 VTAGANRKP--GETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVVS  117 (142)
T ss_dssp             ECCCC--------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEECS
T ss_pred             EecccccCc--CcchhHHhhHHHHHHHHHHHHhhccCCCceEEEec
Confidence            999865432  22235778999999999999999886544 44444

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=97.85  E-value=0.0001  Score=47.82  Aligned_cols=74  Identities=14%  Similarity=0.080  Sum_probs=50.7

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEE
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVF   82 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi   82 (248)
                      ++++|+|+|.|. |.-|.++++.|.++|++|++.+.+........++      ....++..+. +.+.    +.++|.||
T Consensus         2 ~~~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~~~~~~~~~------~~~~~~~~~~-~~~~----~~~~d~vi   69 (93)
T d2jfga1           2 DYQGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMTPPGLDKLP------EAVERHTGSL-NDEW----LMAADLIV   69 (93)
T ss_dssp             CCTTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSSCTTGGGSC------TTSCEEESBC-CHHH----HHHCSEEE
T ss_pred             CcCCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcCchhHHHHh------hccceeeccc-chhh----hccCCEEE
Confidence            588999999998 5689999999999999999999866432222111      2333443432 3333    34579999


Q ss_pred             EccccC
Q 025755           83 HVACPV   88 (248)
Q Consensus        83 ~~ag~~   88 (248)
                      -.-|+.
T Consensus        70 ~SPGi~   75 (93)
T d2jfga1          70 ASPGIA   75 (93)
T ss_dssp             ECTTSC
T ss_pred             ECCCCC
Confidence            877763

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=97.83  E-value=4.6e-05  Score=54.31  Aligned_cols=39  Identities=21%  Similarity=0.408  Sum_probs=36.0

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCc
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCD   42 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~   42 (248)
                      .++|+|.|.||.|.+|+.+++.|.++||+|.+++|+...
T Consensus         7 ~~~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~   45 (152)
T d2pv7a2           7 SDIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWA   45 (152)
T ss_dssp             TTCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGG
T ss_pred             CCCCeEEEEcCCCHHHHHHHHHHHHcCCCcEeccccccc
Confidence            567899999999999999999999999999999998753

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.80  E-value=1.6e-05  Score=49.78  Aligned_cols=37  Identities=30%  Similarity=0.331  Sum_probs=33.7

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCC
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPC   41 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~   41 (248)
                      ++++++|+||+|++|...++.+...|++|+++.++++
T Consensus        31 ~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~   67 (77)
T d1o8ca2          31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRES   67 (77)
T ss_dssp             GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGG
T ss_pred             CCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHH
Confidence            4679999999999999999988889999999998864

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.77  E-value=0.00017  Score=50.56  Aligned_cols=110  Identities=17%  Similarity=0.149  Sum_probs=72.0

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCC--CeEEEEEcCCCchhhHHhh--hhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEE
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKG--YMVHGTVRDPCDEKNAHLK--KLEGASENLQLFKTDLLDYEALCAATAGCTGVF   82 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g--~~V~~~~r~~~~~~~~~~~--~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi   82 (248)
                      +||.|+|+ |.+|+.++..|+.++  .++.+++++.....-..+.  ..............|.   +    .+++.|+||
T Consensus         1 mKI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~~~---~----~~~~adivv   72 (140)
T d1a5za1           1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGDY---A----DLKGSDVVI   72 (140)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECCG---G----GGTTCSEEE
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCCcH---H----HhcCCCEEE
Confidence            47888896 899999999998877  4788888876422211111  1111123344443332   2    357899999


Q ss_pred             EccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEE
Q 025755           83 HVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVV  126 (248)
Q Consensus        83 ~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~v  126 (248)
                      -+||......  ..-.+++..|..-.+.+++.+.+.....++.+
T Consensus        73 itag~~~~~g--~~r~dl~~~N~~I~~~i~~~i~~~~p~aiviv  114 (140)
T d1a5za1          73 VAAGVPQKPG--ETRLQLLGRNARVMKEIARNVSKYAPDSIVIV  114 (140)
T ss_dssp             ECCCCCCCSS--CCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEE
T ss_pred             EecccccCCC--cchhhhhccccchHHHHHHHHHhcCCCcEEEE
Confidence            9998754322  22256788899888999999998865555554

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.76  E-value=2.3e-05  Score=57.51  Aligned_cols=77  Identities=21%  Similarity=0.246  Sum_probs=47.8

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHH-hCCCCEEEE
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAA-TAGCTGVFH   83 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~-~~~id~vi~   83 (248)
                      ++.+|||+||+|++|...++.....|++|+++.++..+  .+..+.+   ..+..+-. +-.+.+.++.. -+++|+|+.
T Consensus        31 ~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k--~~~~~~l---Ga~~vi~~-~~~~~~~~~~~~~~gvD~vid  104 (176)
T d1xa0a2          31 ERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAE--HDYLRVL---GAKEVLAR-EDVMAERIRPLDKQRWAAAVD  104 (176)
T ss_dssp             GGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTC--HHHHHHT---TCSEEEEC-C---------CCSCCEEEEEE
T ss_pred             CCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHH--HHHHHhc---ccceeeec-chhHHHHHHHhhccCcCEEEE
Confidence            36789999999999999999998999999999988653  2333332   22222211 11111222211 136899999


Q ss_pred             cccc
Q 025755           84 VACP   87 (248)
Q Consensus        84 ~ag~   87 (248)
                      +.|.
T Consensus       105 ~vgg  108 (176)
T d1xa0a2         105 PVGG  108 (176)
T ss_dssp             CSTT
T ss_pred             cCCc
Confidence            8863

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=97.75  E-value=0.00034  Score=49.11  Aligned_cols=111  Identities=16%  Similarity=0.021  Sum_probs=72.3

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCC--CeEEEEEcCCCchhhHHhhh--hc-CCCCCeEEEEccCCCHHHHHHHhCCCCEE
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKG--YMVHGTVRDPCDEKNAHLKK--LE-GASENLQLFKTDLLDYEALCAATAGCTGV   81 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g--~~V~~~~r~~~~~~~~~~~~--~~-~~~~~~~~~~~Di~d~~~~~~~~~~id~v   81 (248)
                      +||.|+|+ |.+|+.++..|+..|  .++.+++++...........  .. ....+..+...  .|.+    .+++.|+|
T Consensus         1 mKI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~--~~~~----~~~dadvv   73 (142)
T d1guza1           1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGS--NDYA----DTANSDIV   73 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEE--SCGG----GGTTCSEE
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEec--CCHH----HhcCCeEE
Confidence            47889996 999999999999987  48999998875332222111  10 01223334322  2222    35789999


Q ss_pred             EEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEE
Q 025755           82 FHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVV  126 (248)
Q Consensus        82 i~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~v  126 (248)
                      |-+||.....  ...-.+.++.|..-...+++.+.+.....++.+
T Consensus        74 vitag~~~~~--g~~r~~l~~~N~~i~~~i~~~i~~~~p~aiviv  116 (142)
T d1guza1          74 IITAGLPRKP--GMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIV  116 (142)
T ss_dssp             EECCSCCCCT--TCCHHHHHHHHHHHHHHHHHHHHHHCSSCEEEE
T ss_pred             EEEEecCCCC--CCchHHHHHHHHHHHHHHHHHhhccCCCeEEEE
Confidence            9999874432  122256788999989999999988765444443

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.75  E-value=5.4e-05  Score=55.21  Aligned_cols=74  Identities=14%  Similarity=0.095  Sum_probs=50.5

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHH---HHHHhC--CCC
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEA---LCAATA--GCT   79 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~---~~~~~~--~id   79 (248)
                      .+.+|+|+||+|++|...++.+...|++|++++++++  +.+..+++.   .+ ..  .|.++.+.   +.+...  ++|
T Consensus        28 ~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~--~~~~~~~~G---a~-~v--i~~~~~~~~~~i~~~t~~~g~d   99 (174)
T d1yb5a2          28 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEE--GQKIVLQNG---AH-EV--FNHREVNYIDKIKKYVGEKGID   99 (174)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHH--HHHHHHHTT---CS-EE--EETTSTTHHHHHHHHHCTTCEE
T ss_pred             CCCEEEEEeccccccccccccccccCccccccccccc--ccccccccC---cc-cc--cccccccHHHHhhhhhccCCce
Confidence            5789999999999999999999889999999997652  223333321   11 22  35554433   333332  489


Q ss_pred             EEEEccc
Q 025755           80 GVFHVAC   86 (248)
Q Consensus        80 ~vi~~ag   86 (248)
                      +++.+.|
T Consensus       100 ~v~d~~g  106 (174)
T d1yb5a2         100 IIIEMLA  106 (174)
T ss_dssp             EEEESCH
T ss_pred             EEeeccc
Confidence            9998876

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=97.73  E-value=0.00022  Score=51.09  Aligned_cols=115  Identities=17%  Similarity=0.057  Sum_probs=75.3

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCC--eEEEEEcCCCchhhHH--hhhhcCC-CCCeEEEEccCCCHHHHHHHhCCC
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGY--MVHGTVRDPCDEKNAH--LKKLEGA-SENLQLFKTDLLDYEALCAATAGC   78 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~--~V~~~~r~~~~~~~~~--~~~~~~~-~~~~~~~~~Di~d~~~~~~~~~~i   78 (248)
                      ++.+||.|+|+ |.+|..++-.|+.+|.  ++++++++.+...-+.  +...... .........|.   ++    +++.
T Consensus        18 ~~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~~d~---~~----~~~a   89 (160)
T d1i0za1          18 VPNNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVADKDY---SV----TANS   89 (160)
T ss_dssp             CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEECSSG---GG----GTTC
T ss_pred             CCCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEeccch---hh----cccc
Confidence            45679999996 9999999999999985  7889888753221111  1111111 11222222332   22    5678


Q ss_pred             CEEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCC-EEEEEec
Q 025755           79 TGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVK-RVVVVSS  128 (248)
Q Consensus        79 d~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~-~iV~vSS  128 (248)
                      |+||..||.....  ...-.+.++.|..-.+.+++.+.+.+.. -+|.+|-
T Consensus        90 diVVitAg~~~~~--g~tR~~l~~~N~~i~~~i~~~i~~~~p~aiiivvtN  138 (160)
T d1i0za1          90 KIVVVTAGVRQQE--GESRLNLVQRNVNVFKFIIPQIVKYSPDCIIIVVSN  138 (160)
T ss_dssp             SEEEECCSCCCCT--TCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred             cEEEEecCCcccc--CcchHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCC
Confidence            9999999975432  2233678899999999999999988654 4555553

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.73  E-value=4.6e-05  Score=55.94  Aligned_cols=74  Identities=20%  Similarity=0.182  Sum_probs=51.0

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCH---HHHHHHh--CCCC
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDY---EALCAAT--AGCT   79 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~---~~~~~~~--~~id   79 (248)
                      ++.+|||+||+|++|...++.+...|++|++++++.+  +.+.++++   ..+ ..  .|..++   +.+.+..  +++|
T Consensus        25 ~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~--~~~~l~~~---Ga~-~v--i~~~~~~~~~~v~~~t~~~g~d   96 (183)
T d1pqwa_          25 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDA--KREMLSRL---GVE-YV--GDSRSVDFADEILELTDGYGVD   96 (183)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHH--HHHHHHTT---CCS-EE--EETTCSTHHHHHHHHTTTCCEE
T ss_pred             CCCEEEEECCCCCcccccchhhccccccceeeecccc--cccccccc---ccc-cc--ccCCccCHHHHHHHHhCCCCEE
Confidence            4689999999999999999999889999999988653  22333322   222 22  233333   3444443  3689


Q ss_pred             EEEEccc
Q 025755           80 GVFHVAC   86 (248)
Q Consensus        80 ~vi~~ag   86 (248)
                      +++.+.|
T Consensus        97 ~v~d~~g  103 (183)
T d1pqwa_          97 VVLNSLA  103 (183)
T ss_dssp             EEEECCC
T ss_pred             EEEeccc
Confidence            9999886

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=97.68  E-value=0.0003  Score=49.61  Aligned_cols=112  Identities=12%  Similarity=0.098  Sum_probs=70.8

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCC--CeEEEEEcCCCchhhHH--hhhhcC-CCCCeEEEEccCCCHHHHHHHhCCCCEE
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKG--YMVHGTVRDPCDEKNAH--LKKLEG-ASENLQLFKTDLLDYEALCAATAGCTGV   81 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g--~~V~~~~r~~~~~~~~~--~~~~~~-~~~~~~~~~~Di~d~~~~~~~~~~id~v   81 (248)
                      |||.|+|+ |.+|+.++-.|+.+|  .++++++++........  +..... ..........|   .++    +++.|+|
T Consensus         2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~d---~~~----l~~adiV   73 (146)
T d1hyha1           2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVIND---WAA----LADADVV   73 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESC---GGG----GTTCSEE
T ss_pred             CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceeccC---HHH----hccccEE
Confidence            78999995 999999999999887  37888887654222111  111111 12233333333   233    4688999


Q ss_pred             EEccccCCCCCC--CCccccchhhhHHHHHHHHHHHHhcCCCEEEEE
Q 025755           82 FHVACPVPVGKV--PNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVV  126 (248)
Q Consensus        82 i~~ag~~~~~~~--~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~v  126 (248)
                      |-+||.......  ...-.+.++.|..-.+.+.+.+.+.....++.+
T Consensus        74 VitaG~~~~~~~~~g~~R~~l~~~N~~i~~~i~~~i~~~~p~aiviv  120 (146)
T d1hyha1          74 ISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGFHGVLVV  120 (146)
T ss_dssp             EECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTTCCSEEEE
T ss_pred             EEeccccccccccCCccHHHHHHHHHHHHHHHHHHHhhcCCCeEEEE
Confidence            999996542211  111245778899999999999998865544444

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=97.62  E-value=0.00023  Score=50.59  Aligned_cols=75  Identities=20%  Similarity=0.223  Sum_probs=56.6

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHh-CCCCEEEEcc
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAAT-AGCTGVFHVA   85 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~-~~id~vi~~a   85 (248)
                      -+++|.|. |.+|+.+++.|.++|++|++++.+++.. ....+...  ..++.++.+|.+|++.++++- +++|.||-+.
T Consensus         4 nHiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~-~~~~~~~~--~~~~~vi~Gd~~d~~~L~~a~i~~a~~vi~~~   79 (153)
T d1id1a_           4 DHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDD-IKQLEQRL--GDNADVIPGDSNDSSVLKKAGIDRCRAILALS   79 (153)
T ss_dssp             SCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHH-HHHHHHHH--CTTCEEEESCTTSHHHHHHHTTTTCSEEEECS
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhH-HHHHHHhh--cCCcEEEEccCcchHHHHHhccccCCEEEEcc
Confidence            46888888 6899999999999999999999876422 12222221  347889999999999988863 5678887654

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.60  E-value=0.00022  Score=51.10  Aligned_cols=115  Identities=18%  Similarity=0.201  Sum_probs=73.4

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCC--eEEEEEcCCCchhhH--HhhhhcCC-CCCeEEEEccCCCHHHHHHHhCCC
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGY--MVHGTVRDPCDEKNA--HLKKLEGA-SENLQLFKTDLLDYEALCAATAGC   78 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~--~V~~~~r~~~~~~~~--~~~~~~~~-~~~~~~~~~Di~d~~~~~~~~~~i   78 (248)
                      ++..||.|+|+ |.+|..++..|+..|.  ++++++++.....-.  .+...... .........|.   +    .+++.
T Consensus        17 ~~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~d~---~----~~~~a   88 (159)
T d2ldxa1          17 LSRCKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGKDY---N----VSANS   88 (159)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEESSG---G----GGTTE
T ss_pred             CCCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEeccch---h----hhccc
Confidence            45568999996 9999999999999885  788988775322111  12111111 11222222332   2    34678


Q ss_pred             CEEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCC-EEEEEec
Q 025755           79 TGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVK-RVVVVSS  128 (248)
Q Consensus        79 d~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~-~iV~vSS  128 (248)
                      |+||..||......  ..-.+.++.|..-.+.+++.+.+.+.. .++.+|-
T Consensus        89 divvitag~~~~~~--~~R~dll~~N~~i~~~i~~~i~~~~p~~ivivvtN  137 (159)
T d2ldxa1          89 KLVIITAGARMVSG--QTRLDLLQRNVAIMKAIVPGVIQNSPDCKIIVVTN  137 (159)
T ss_dssp             EEEEECCSCCCCTT--TCSSCTTHHHHHHHHHHTTTHHHHSTTCEEEECSS
T ss_pred             cEEEEecccccCCC--CCHHHHHHHHHHHHHHHHHHHhccCCCeEEEEeCC
Confidence            99999998755432  222567899999999998888877543 4555543

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=97.59  E-value=1.5e-05  Score=58.07  Aligned_cols=36  Identities=33%  Similarity=0.358  Sum_probs=32.9

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCC
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPC   41 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~   41 (248)
                      +.+|||+||+|++|...++.....|++|+++.++.+
T Consensus        24 ~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~   59 (167)
T d1tt7a2          24 KGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNRE   59 (167)
T ss_dssp             GCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSS
T ss_pred             CCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHH
Confidence            557999999999999999998889999999999875

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=97.54  E-value=8.7e-05  Score=54.22  Aligned_cols=75  Identities=19%  Similarity=0.120  Sum_probs=52.1

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCH---HHHHHHhC--CCC
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDY---EALCAATA--GCT   79 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~---~~~~~~~~--~id   79 (248)
                      .+++|+|+||+|++|..+++.....|++|++++++.+  +.+..+++-   .+ +.  .|.+++   +.++++..  ++|
T Consensus        28 ~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~--k~~~~~~lG---a~-~v--i~~~~~d~~~~v~~~t~g~g~d   99 (179)
T d1qora2          28 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQ--KAQSALKAG---AW-QV--INYREEDLVERLKEITGGKKVR   99 (179)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHH--HHHHHHHHT---CS-EE--EETTTSCHHHHHHHHTTTCCEE
T ss_pred             CCCEEEEEccccccchHHHHHHHHhCCeEeecccchH--HHHHHHhcC---Ce-EE--EECCCCCHHHHHHHHhCCCCeE
Confidence            4789999999999999999999889999999998864  223333331   12 22  344443   34444433  479


Q ss_pred             EEEEcccc
Q 025755           80 GVFHVACP   87 (248)
Q Consensus        80 ~vi~~ag~   87 (248)
                      +|+.+.|.
T Consensus       100 ~v~d~~g~  107 (179)
T d1qora2         100 VVYDSVGR  107 (179)
T ss_dssp             EEEECSCG
T ss_pred             EEEeCccH
Confidence            99998863

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=97.54  E-value=0.00068  Score=47.51  Aligned_cols=112  Identities=16%  Similarity=0.144  Sum_probs=72.5

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCCC--eEEEEEcCCCchhhH--HhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEE
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKGY--MVHGTVRDPCDEKNA--HLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVF   82 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g~--~V~~~~r~~~~~~~~--~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi   82 (248)
                      .||.|+|+ |.+|++++..|+.+|.  ++++++++....+-+  .+...............+  +.+    .+++.|+||
T Consensus         2 ~Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~~--~~~----~~~daDvVV   74 (143)
T d1llda1           2 TKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSD--DPE----ICRDADMVV   74 (143)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEES--CGG----GGTTCSEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCceeecCC--CHH----HhhCCcEEE
Confidence            47889996 9999999999999885  788888776322111  112111112233333222  222    256789999


Q ss_pred             EccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEE-EEEe
Q 025755           83 HVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRV-VVVS  127 (248)
Q Consensus        83 ~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~i-V~vS  127 (248)
                      -.||.....  ...-.+.++.|..-.+.+++.+.+.+...+ +.+|
T Consensus        75 itaG~~~~~--g~~R~dl~~~N~~i~~~i~~~i~~~~p~ai~ivvt  118 (143)
T d1llda1          75 ITAGPRQKP--GQSRLELVGATVNILKAIMPNLVKVAPNAIYMLIT  118 (143)
T ss_dssp             ECCCCCCCT--TCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECC
T ss_pred             EecccccCC--CCchhhhhhhhHHHHHHHHHHHHhhCCCeEEEEeC
Confidence            999975432  222257889999999999999988865444 4444

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.49  E-value=0.00042  Score=46.54  Aligned_cols=96  Identities=11%  Similarity=0.065  Sum_probs=64.5

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEE
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVF   82 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi   82 (248)
                      ++++|+|+|.|++. +|.+-++.|++.|++|++++....+......    . ..++.++.-+..+. +    +++.+.|+
T Consensus         9 ~l~~k~vlVvG~G~-va~~ka~~ll~~ga~v~v~~~~~~~~~~~~~----~-~~~i~~~~~~~~~~-d----l~~~~lv~   77 (113)
T d1pjqa1           9 QLRDRDCLIVGGGD-VAERKARLLLEAGARLTVNALTFIPQFTVWA----N-EGMLTLVEGPFDET-L----LDSCWLAI   77 (113)
T ss_dssp             CCBTCEEEEECCSH-HHHHHHHHHHHTTBEEEEEESSCCHHHHHHH----T-TTSCEEEESSCCGG-G----GTTCSEEE
T ss_pred             EeCCCEEEEECCCH-HHHHHHHHHHHCCCeEEEEeccCChHHHHHH----h-cCCceeeccCCCHH-H----hCCCcEEe
Confidence            47899999999866 9999999999999999999876643222211    1 35677777666542 2    45667776


Q ss_pred             EccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEec
Q 025755           83 HVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSS  128 (248)
Q Consensus        83 ~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS  128 (248)
                      .+.+-        .     +.    ...+.+.|++.+  .+|++..
T Consensus        78 ~at~d--------~-----~~----n~~i~~~a~~~~--ilVNv~D  104 (113)
T d1pjqa1          78 AATDD--------D-----TV----NQRVSDAAESRR--IFCNVVD  104 (113)
T ss_dssp             ECCSC--------H-----HH----HHHHHHHHHHTT--CEEEETT
T ss_pred             ecCCC--------H-----HH----HHHHHHHHHHcC--CEEEeCC
Confidence            54421        1     11    335777777765  5788754

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=97.47  E-value=8e-05  Score=54.45  Aligned_cols=79  Identities=19%  Similarity=0.084  Sum_probs=49.7

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhh-hcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEEc
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKK-LEGASENLQLFKTDLLDYEALCAATAGCTGVFHV   84 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~~   84 (248)
                      .|+|.|.|+ |-+|..++..|.++|++|++++|+++......... .....+.............++.+.+++.|+||-+
T Consensus         1 sk~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~aD~iii~   79 (184)
T d1bg6a2           1 SKTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILIV   79 (184)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEEC
T ss_pred             CCEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCCchhhhhhhhhhhhhhhhhhhHhHhcCCCEEEEE
Confidence            489999998 88999999999999999999999864221111110 0111112222222222223466777889999876


Q ss_pred             c
Q 025755           85 A   85 (248)
Q Consensus        85 a   85 (248)
                      .
T Consensus        80 v   80 (184)
T d1bg6a2          80 V   80 (184)
T ss_dssp             S
T ss_pred             E
Confidence            4

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=97.45  E-value=0.00031  Score=50.64  Aligned_cols=74  Identities=14%  Similarity=0.113  Sum_probs=53.5

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEEc
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFHV   84 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~~   84 (248)
                      .+.+|+|.|+ |++|...++.+...|+++++++++.++  .+..+++-   .+.   ..|..+.+......+++|++|.+
T Consensus        30 ~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~--~~~a~~lG---ad~---~i~~~~~~~~~~~~~~~D~vid~  100 (168)
T d1uufa2          30 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAK--REAAKALG---ADE---VVNSRNADEMAAHLKSFDFILNT  100 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGG--HHHHHHHT---CSE---EEETTCHHHHHTTTTCEEEEEEC
T ss_pred             CCCEEEEecc-chHHHHHHHHhhcccccchhhccchhH--HHHHhccC---CcE---EEECchhhHHHHhcCCCceeeee
Confidence            4789999986 889999999988899999998887642  23333331   121   24666666666666789999999


Q ss_pred             ccc
Q 025755           85 ACP   87 (248)
Q Consensus        85 ag~   87 (248)
                      .|.
T Consensus       101 ~g~  103 (168)
T d1uufa2         101 VAA  103 (168)
T ss_dssp             CSS
T ss_pred             eec
Confidence            874

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.44  E-value=0.00011  Score=54.25  Aligned_cols=75  Identities=17%  Similarity=0.076  Sum_probs=46.0

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCC---HHHHHHHhC-CCCEE
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLD---YEALCAATA-GCTGV   81 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d---~~~~~~~~~-~id~v   81 (248)
                      +++|||+||+|++|...++.....|+++++...+.++........+   ..+ ..+  |..+   .+.+++... ++|+|
T Consensus        31 ~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~---gad-~vi--~~~~~~~~~~~~~~~~~GvDvv  104 (187)
T d1vj1a2          31 NQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSEL---GFD-AAV--NYKTGNVAEQLREACPGGVDVY  104 (187)
T ss_dssp             CCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHS---CCS-EEE--ETTSSCHHHHHHHHCTTCEEEE
T ss_pred             CCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcc---cce-EEe--eccchhHHHHHHHHhccCceEE
Confidence            3789999999999999999988899876665444322222222222   112 222  3333   233444332 58999


Q ss_pred             EEccc
Q 025755           82 FHVAC   86 (248)
Q Consensus        82 i~~ag   86 (248)
                      +.+.|
T Consensus       105 ~D~vG  109 (187)
T d1vj1a2         105 FDNVG  109 (187)
T ss_dssp             EESSC
T ss_pred             EecCC
Confidence            98886

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=97.42  E-value=0.00036  Score=48.96  Aligned_cols=111  Identities=14%  Similarity=0.115  Sum_probs=67.0

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCCC-eEEEEEcCCCchhhHHhhh--hcC-CCCCeEEEEccCCCHHHHHHHhCCCCEEE
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKGY-MVHGTVRDPCDEKNAHLKK--LEG-ASENLQLFKTDLLDYEALCAATAGCTGVF   82 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~~~~~~--~~~-~~~~~~~~~~Di~d~~~~~~~~~~id~vi   82 (248)
                      |||.|+|+ |.+|..++-.|+.++. ++++++.+.+.........  ... ......+...  .|.++    +++.|+||
T Consensus         2 ~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~--~d~~~----~~~advvv   74 (142)
T d1uxja1           2 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGT--NNYAD----TANSDVIV   74 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE--SCGGG----GTTCSEEE
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccccCCCCEEEec--CcHHH----hcCCCEEE
Confidence            68999996 9999999999988774 8888887764322211111  000 0112222211  12222    45789999


Q ss_pred             EccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEE
Q 025755           83 HVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVV  126 (248)
Q Consensus        83 ~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~v  126 (248)
                      -+||.....  ...-.+.++.|..-.+.+++...+.....++.+
T Consensus        75 itag~~~~~--~~~r~dl~~~N~~i~~~i~~~i~k~~p~aiviv  116 (142)
T d1uxja1          75 VTSGAPRKP--GMSREDLIKVNADITRACISQAAPLSPNAVIIM  116 (142)
T ss_dssp             ECCSCC-----------CHHHHHHHHHHHHHHHGGGCTTCEEEE
T ss_pred             EeeeccCCc--CcchhHHHhHHHHHHHHHHHHHhccCCCceEEE
Confidence            999975432  223357788999999999999998865455444

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=97.36  E-value=0.0003  Score=50.99  Aligned_cols=75  Identities=15%  Similarity=0.093  Sum_probs=51.0

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEE
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFH   83 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~   83 (248)
                      +++|+|+|.|+ ||.+++++..|.+.+.+|+++.|+.++ .+...+.+.. ...+.....|..       .....|+|||
T Consensus        16 ~~~k~vlIlGa-GGaarai~~aL~~~~~~i~I~nR~~~~-a~~l~~~~~~-~~~~~~~~~~~~-------~~~~~diiIN   85 (171)
T d1p77a1          16 RPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSK-TKELAERFQP-YGNIQAVSMDSI-------PLQTYDLVIN   85 (171)
T ss_dssp             CTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHH-HHHHHHHHGG-GSCEEEEEGGGC-------CCSCCSEEEE
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHcccCceeeeccchHHH-HHHHHHHHhh-ccccchhhhccc-------cccccceeee
Confidence            57899999977 667999999999988899999998743 2222333322 234555544422       1357899999


Q ss_pred             ccccC
Q 025755           84 VACPV   88 (248)
Q Consensus        84 ~ag~~   88 (248)
                      +....
T Consensus        86 ~tp~g   90 (171)
T d1p77a1          86 ATSAG   90 (171)
T ss_dssp             CCCC-
T ss_pred             ccccc
Confidence            97654

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=97.35  E-value=0.0025  Score=44.86  Aligned_cols=114  Identities=14%  Similarity=0.031  Sum_probs=70.8

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCC-CeEEEEEcCCCchhhHH--hhhhcC-CCCCeEEEEccCCCHHHHHHHhCCCCEE
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKG-YMVHGTVRDPCDEKNAH--LKKLEG-ASENLQLFKTDLLDYEALCAATAGCTGV   81 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g-~~V~~~~r~~~~~~~~~--~~~~~~-~~~~~~~~~~Di~d~~~~~~~~~~id~v   81 (248)
                      ..||.|.|+ |.+|+.++..|+.++ .++.+++++.....-..  +..... ...+......+  +.    ..+++.|+|
T Consensus         3 ~~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~--~~----~~~~~advv   75 (150)
T d1t2da1           3 KAKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSN--TY----DDLAGADVV   75 (150)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEEC--CG----GGGTTCSEE
T ss_pred             CCeEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEecc--cc----cccCCCcEE
Confidence            358999995 999999998888777 47888888764322111  111100 11222233222  22    234678999


Q ss_pred             EEccccCCCCC-CC--CccccchhhhHHHHHHHHHHHHhcCCCEEEEE
Q 025755           82 FHVACPVPVGK-VP--NPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVV  126 (248)
Q Consensus        82 i~~ag~~~~~~-~~--~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~v  126 (248)
                      |-+||...... ..  ..-.+.++.|..-.+.+++.+.+.....++.+
T Consensus        76 vitag~~~~~g~~~~~~~R~~l~~~N~~iv~~i~~~i~~~~p~aiviv  123 (150)
T d1t2da1          76 IVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIV  123 (150)
T ss_dssp             EECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEE
T ss_pred             EEecccccCCCCCccccchhHHHHHHHHHHHHHHHHHHhcCCCeEEEE
Confidence            99999654321 11  11246789999999999999998865554444

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=97.31  E-value=0.00026  Score=49.90  Aligned_cols=70  Identities=13%  Similarity=0.042  Sum_probs=42.7

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCC----CeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEE
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKG----YMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGV   81 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~v   81 (248)
                      ||+|.|.||||.+|+.+++.|+++.    .+++...++..........     ...  ....++.+.+.    ++++|++
T Consensus         1 MkkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s~g~~~~~~-----~~~--~~~~~~~~~~~----~~~~Div   69 (146)
T d1t4ba1           1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAAPSFG-----GTT--GTLQDAFDLEA----LKALDII   69 (146)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCCGGG-----TCC--CBCEETTCHHH----HHTCSEE
T ss_pred             CcEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeecccccccccccc-----CCc--eeeecccchhh----hhcCcEE
Confidence            5799999999999999999998864    3566565554322111110     011  11223344333    4578999


Q ss_pred             EEccc
Q 025755           82 FHVAC   86 (248)
Q Consensus        82 i~~ag   86 (248)
                      +.+++
T Consensus        70 F~a~~   74 (146)
T d1t4ba1          70 VTCQG   74 (146)
T ss_dssp             EECSC
T ss_pred             EEecC
Confidence            88873

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=97.26  E-value=0.00039  Score=50.81  Aligned_cols=76  Identities=14%  Similarity=0.123  Sum_probs=48.1

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCC-eEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHH----HHHHhC--C
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGY-MVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEA----LCAATA--G   77 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~----~~~~~~--~   77 (248)
                      .+.+|+|+|+ |+||...++.+...|+ +|++++++..  ..+..+++   ... ..+...-.+..+    +.+...  +
T Consensus        28 ~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~--~~~~a~~l---Ga~-~vi~~~~~~~~~~~~~i~~~~~~~g  100 (182)
T d1vj0a2          28 AGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPN--RLKLAEEI---GAD-LTLNRRETSVEERRKAIMDITHGRG  100 (182)
T ss_dssp             BTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHH--HHHHHHHT---TCS-EEEETTTSCHHHHHHHHHHHTTTSC
T ss_pred             CCCEEEEECC-Cccchhheecccccccccccccccccc--cccccccc---cce-EEEeccccchHHHHHHHHHhhCCCC
Confidence            5789999986 8999999999999998 7999988763  22223332   112 222221122222    222222  5


Q ss_pred             CCEEEEcccc
Q 025755           78 CTGVFHVACP   87 (248)
Q Consensus        78 id~vi~~ag~   87 (248)
                      +|+||.+.|.
T Consensus       101 ~Dvvid~vG~  110 (182)
T d1vj0a2         101 ADFILEATGD  110 (182)
T ss_dssp             EEEEEECSSC
T ss_pred             ceEEeecCCc
Confidence            8999999874

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=97.26  E-value=0.00065  Score=48.90  Aligned_cols=77  Identities=17%  Similarity=0.047  Sum_probs=49.3

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEE-ccCCCHHHHHHHh-----CCC
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFK-TDLLDYEALCAAT-----AGC   78 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~Di~d~~~~~~~~-----~~i   78 (248)
                      .+.+|+|+| +|++|...++.+...|++|++++++..  +.+..+++   ..+..+.. -.-.+..++.+.+     .++
T Consensus        26 ~g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~--r~~~a~~~---ga~~~~~~~~~~~~~~~~~~~~~~~~g~g~   99 (170)
T d1e3ja2          26 LGTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPR--RLEVAKNC---GADVTLVVDPAKEEESSIIERIRSAIGDLP   99 (170)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHH--HHHHHHHT---TCSEEEECCTTTSCHHHHHHHHHHHSSSCC
T ss_pred             CCCEEEEEc-ccccchhhHhhHhhhcccccccchHHH--HHHHHHHc---CCcEEEeccccccccchhhhhhhcccccCC
Confidence            467999997 689999999999889999999998763  22222222   22222222 1122333333322     358


Q ss_pred             CEEEEcccc
Q 025755           79 TGVFHVACP   87 (248)
Q Consensus        79 d~vi~~ag~   87 (248)
                      |+||.++|.
T Consensus       100 D~vid~~g~  108 (170)
T d1e3ja2         100 NVTIDCSGN  108 (170)
T ss_dssp             SEEEECSCC
T ss_pred             ceeeecCCC
Confidence            999999874

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.23  E-value=0.0025  Score=44.44  Aligned_cols=112  Identities=13%  Similarity=0.036  Sum_probs=71.5

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCCC--eEEEEEcCCCchhhHH--hhhhc-CCCCCeEEEE-ccCCCHHHHHHHhCCCCE
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKGY--MVHGTVRDPCDEKNAH--LKKLE-GASENLQLFK-TDLLDYEALCAATAGCTG   80 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g~--~V~~~~r~~~~~~~~~--~~~~~-~~~~~~~~~~-~Di~d~~~~~~~~~~id~   80 (248)
                      |||.|+|+ |.+|..++-.|+.+|.  ++++++++.+...-..  +.... .......... .|.   +    .+++.|+
T Consensus         1 MKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~~d~---~----~~~~adi   72 (142)
T d1ojua1           1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADY---S----LLKGSEI   72 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESCG---G----GGTTCSE
T ss_pred             CEEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccCCCH---H----HhccccE
Confidence            47888896 9999999999998773  7888887753221111  11111 1112223332 232   2    4668899


Q ss_pred             EEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEec
Q 025755           81 VFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSS  128 (248)
Q Consensus        81 vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS  128 (248)
                      ||-.||.....  ...-.+.++.|..-...+++.+.+.+...++.+-|
T Consensus        73 Vvitag~~~~~--g~~r~~l~~~n~~i~~~i~~~i~~~~p~aivivvt  118 (142)
T d1ojua1          73 IVVTAGLARKP--GMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVT  118 (142)
T ss_dssp             EEECCCCCCCS--SCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECS
T ss_pred             EEEeccccCCC--CCchHHHHHHhhHHHHHHHHHHHhhCCCcEEEEec
Confidence            99999864432  22336788889999999999999886545555433

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.19  E-value=0.00043  Score=49.92  Aligned_cols=76  Identities=12%  Similarity=-0.017  Sum_probs=50.4

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEEc
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFHV   84 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~~   84 (248)
                      .+.+|+|.|+ |++|...++.+...|++|++++++..+  .+..+++   ..+..+...+  +.+..++..+..|+++.+
T Consensus        27 ~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k--~~~a~~l---Ga~~~i~~~~--~~~~~~~~~~~~d~vi~~   98 (168)
T d1piwa2          27 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRK--REDAMKM---GADHYIATLE--EGDWGEKYFDTFDLIVVC   98 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTT--HHHHHHH---TCSEEEEGGG--TSCHHHHSCSCEEEEEEC
T ss_pred             CCCEEEEECC-CCcchhHHHHhhhccccccccccchhH--HHHhhcc---CCcEEeeccc--hHHHHHhhhcccceEEEE
Confidence            4789999986 899999998887889999999997642  2333333   1122121122  223445556678999998


Q ss_pred             cccC
Q 025755           85 ACPV   88 (248)
Q Consensus        85 ag~~   88 (248)
                      .+..
T Consensus        99 ~~~~  102 (168)
T d1piwa2          99 ASSL  102 (168)
T ss_dssp             CSCS
T ss_pred             ecCC
Confidence            7653

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=97.16  E-value=0.00063  Score=49.04  Aligned_cols=36  Identities=22%  Similarity=0.274  Sum_probs=31.8

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCC-eEEEEEcCCC
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGY-MVHGTVRDPC   41 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~-~V~~~~r~~~   41 (248)
                      ++|+|+|.|+ ||.+++++..|.+.|. ++.++.|+.+
T Consensus        16 ~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~   52 (167)
T d1npya1          16 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVK   52 (167)
T ss_dssp             TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHH
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHH
Confidence            5789999988 7899999999999996 7889999874

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=97.12  E-value=0.0018  Score=43.11  Aligned_cols=67  Identities=16%  Similarity=0.040  Sum_probs=52.6

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC--CCCEEE
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA--GCTGVF   82 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~--~id~vi   82 (248)
                      ..||.|.| +|-+|+-++....+.|++|++++.+........         .-.++.+|..|.+.+.++..  ++|+|.
T Consensus        11 ~~kigIlG-gGQL~rMla~aA~~lG~~v~v~d~~~~~PA~~v---------a~~~i~~~~~d~~~l~~~~~~~~~DviT   79 (111)
T d1kjqa2          11 ATRVMLLG-SGELGKEVAIECQRLGVEVIAVDRYADAPAMHV---------AHRSHVINMLDGDALRRVVELEKPHYIV   79 (111)
T ss_dssp             CCEEEEES-CSHHHHHHHHHHHTTTCEEEEEESSTTCGGGGG---------SSEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred             CCEEEEEe-CCHHHHHHHHHHHHCCCEEEEEcCCCCCchhhc---------CCeEEECCCCCHHHHHHHHHhhCCceEE
Confidence            46899998 678999999999999999999998765322211         12567899999999998874  578884

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.04  E-value=0.0024  Score=45.86  Aligned_cols=76  Identities=13%  Similarity=0.045  Sum_probs=50.4

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCC-eEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHh-----CCC
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGY-MVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAAT-----AGC   78 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~-----~~i   78 (248)
                      .+.+|+|.|+ |.+|...++.+...|+ +|++++++..  +.+..+++   ..+ ..+..+-.+..+..+.+     .++
T Consensus        26 ~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~--rl~~a~~~---Ga~-~~~~~~~~~~~~~~~~~~~~~g~g~   98 (171)
T d1pl8a2          26 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSAT--RLSKAKEI---GAD-LVLQISKESPQEIARKVEGQLGCKP   98 (171)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHH--HHHHHHHT---TCS-EEEECSSCCHHHHHHHHHHHHTSCC
T ss_pred             CCCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHH--HHHHHHHh---CCc-ccccccccccccccccccccCCCCc
Confidence            4679999986 9999999999999998 7888888753  22222222   112 33334444544444433     268


Q ss_pred             CEEEEcccc
Q 025755           79 TGVFHVACP   87 (248)
Q Consensus        79 d~vi~~ag~   87 (248)
                      |++|.++|.
T Consensus        99 Dvvid~~G~  107 (171)
T d1pl8a2          99 EVTIECTGA  107 (171)
T ss_dssp             SEEEECSCC
T ss_pred             eEEEeccCC
Confidence            999999874

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=96.97  E-value=0.001  Score=47.75  Aligned_cols=77  Identities=16%  Similarity=0.172  Sum_probs=49.1

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCC-eEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCH-HHHHHHh--CCCCE
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGY-MVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDY-EALCAAT--AGCTG   80 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~-~~~~~~~--~~id~   80 (248)
                      .+.+|+|+|++|++|...++.+...|. +|++.+++..  ..+..+++   ... ..+..+-.|. +.+.+..  +++|+
T Consensus        27 ~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~--~~~~~~~~---Ga~-~~i~~~~~~~~~~~~~~~~~~~~d~  100 (170)
T d1jvba2          27 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREE--AVEAAKRA---GAD-YVINASMQDPLAEIRRITESKGVDA  100 (170)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHH--HHHHHHHH---TCS-EEEETTTSCHHHHHHHHTTTSCEEE
T ss_pred             CCCEEEEEeccccceeeeeecccccccccccccccchh--hHHHHHHc---CCc-eeeccCCcCHHHHHHHHhhcccchh
Confidence            467999999999999999999888885 7888887753  22333332   112 2332232232 3333332  25899


Q ss_pred             EEEcccc
Q 025755           81 VFHVACP   87 (248)
Q Consensus        81 vi~~ag~   87 (248)
                      +|.++|.
T Consensus       101 vid~~g~  107 (170)
T d1jvba2         101 VIDLNNS  107 (170)
T ss_dssp             EEESCCC
T ss_pred             hhccccc
Confidence            9999874

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=96.96  E-value=0.0005  Score=49.14  Aligned_cols=34  Identities=26%  Similarity=0.389  Sum_probs=31.8

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCC
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPC   41 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~   41 (248)
                      |||+|.|+ |.+|..++..|++.|++|.+++|+..
T Consensus         1 MkI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~   34 (167)
T d1ks9a2           1 MKITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQ   34 (167)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             CEEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHH
Confidence            58999998 99999999999999999999999875

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.94  E-value=0.0019  Score=46.16  Aligned_cols=36  Identities=22%  Similarity=0.263  Sum_probs=31.3

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCC
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPC   41 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~   41 (248)
                      .+.+|+|.|+ |++|...++.+...|++|+++++++.
T Consensus        27 ~g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~   62 (166)
T d1llua2          27 PGQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDA   62 (166)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred             CCCEEEEeec-cccHHHHHHHHHHcCCccceecchhh
Confidence            4789999886 99999999988889999999998753

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=96.94  E-value=0.00013  Score=53.97  Aligned_cols=80  Identities=16%  Similarity=0.040  Sum_probs=48.9

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhh-cCCCCCeEEEEccCCCHHHHHHHhCCCCEEE
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKL-EGASENLQLFKTDLLDYEALCAATAGCTGVF   82 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi   82 (248)
                      +.|++|.|.|++. .|.+++..|.+.|++|++.+|+.+.......... ....+++.+ .-++.-..+++.++++.|+||
T Consensus         5 ~~m~KI~ViGaG~-wGtAlA~~La~~g~~V~l~~r~~~~~~~i~~~~~n~~yl~~~~l-~~~i~~t~~l~~a~~~ad~ii   82 (189)
T d1n1ea2           5 LYLNKAVVFGSGA-FGTALAMVLSKKCREVCVWHMNEEEVRLVNEKRENVLFLKGVQL-ASNITFTSDVEKAYNGAEIIL   82 (189)
T ss_dssp             CCEEEEEEECCSH-HHHHHHHHHHTTEEEEEEECSCHHHHHHHHHHTBCTTTSTTCBC-CTTEEEESCHHHHHTTCSCEE
T ss_pred             ceeceEEEECCCH-HHHHHHHHHHHcCCeEEEEEecHHHHHHHhhccccccccccccc-ccccccchhhhhccCCCCEEE
Confidence            4567899998755 9999999999999999999997642211111110 011112211 112222235677788899888


Q ss_pred             Ecc
Q 025755           83 HVA   85 (248)
Q Consensus        83 ~~a   85 (248)
                      -+.
T Consensus        83 iav   85 (189)
T d1n1ea2          83 FVI   85 (189)
T ss_dssp             ECS
T ss_pred             EcC
Confidence            654

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=96.93  E-value=0.00052  Score=50.00  Aligned_cols=36  Identities=31%  Similarity=0.332  Sum_probs=32.9

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCC
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPC   41 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~   41 (248)
                      +.+|||+||+|++|...++..-..|++|+++.++.+
T Consensus        32 ~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~   67 (177)
T d1o89a2          32 DGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRES   67 (177)
T ss_dssp             GCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGG
T ss_pred             CCcEEEEEccccchHHHHHHHHHcCCCeEEEecchh
Confidence            358999999999999999999999999999999875

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.89  E-value=0.00087  Score=48.31  Aligned_cols=84  Identities=10%  Similarity=-0.044  Sum_probs=55.3

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEE
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVF   82 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi   82 (248)
                      +++||+++|.|-+.-+|+=++..|+++|++|+.+..+..... .......  -.............+.++.....+|+||
T Consensus        26 ~l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~lk~~~~~aDIvI  102 (171)
T d1edza1          26 RLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKF-TRGESLK--LNKHHVEDLGEYSEDLLKKCSLDSDVVI  102 (171)
T ss_dssp             TTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEE-ESCCCSS--CCCCEEEEEEECCHHHHHHHHHHCSEEE
T ss_pred             CCCCCEEEEECCccccHHHHHHHHHHCCCEEEEecccccccc-cccccee--eeeeccccccccchhHHhhccccCCEEE
Confidence            478999999999999999999999999999998765432100 0000000  0001111111244667888888899999


Q ss_pred             EccccCC
Q 025755           83 HVACPVP   89 (248)
Q Consensus        83 ~~ag~~~   89 (248)
                      ...|...
T Consensus       103 savG~p~  109 (171)
T d1edza1         103 TGVPSEN  109 (171)
T ss_dssp             ECCCCTT
T ss_pred             EccCCCc
Confidence            9887644

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.86  E-value=0.0018  Score=46.52  Aligned_cols=38  Identities=13%  Similarity=0.090  Sum_probs=34.5

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCC
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDP   40 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~   40 (248)
                      +++||+|+|.|.+.-+|+-++..|+++|++|+++....
T Consensus        36 ~l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t   73 (170)
T d1a4ia1          36 PIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKT   73 (170)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC
T ss_pred             ccccceEEEEecCCccchHHHHHHHhccCceEEEeccc
Confidence            37899999999999999999999999999999876544

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=96.86  E-value=0.0014  Score=47.73  Aligned_cols=63  Identities=24%  Similarity=0.169  Sum_probs=48.1

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEE
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVF   82 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi   82 (248)
                      .+.+|++.|.|.+. ||+.+++.+..-|.+|++++|+..+.                    +..-.++++++++..|+|+
T Consensus        39 ~l~gk~vgIiG~G~-IG~~va~~l~~~g~~v~~~d~~~~~~--------------------~~~~~~~l~ell~~sDiv~   97 (181)
T d1qp8a1          39 LIQGEKVAVLGLGE-IGTRVGKILAALGAQVRGFSRTPKEG--------------------PWRFTNSLEEALREARAAV   97 (181)
T ss_dssp             CCTTCEEEEESCST-HHHHHHHHHHHTTCEEEEECSSCCCS--------------------SSCCBSCSHHHHTTCSEEE
T ss_pred             cccCceEEEecccc-ccccceeeeecccccccccccccccc--------------------ceeeeechhhhhhccchhh
Confidence            37899999998766 99999999999999999998876321                    0111124678889999988


Q ss_pred             Eccc
Q 025755           83 HVAC   86 (248)
Q Consensus        83 ~~ag   86 (248)
                      .+.-
T Consensus        98 ~~~p  101 (181)
T d1qp8a1          98 CALP  101 (181)
T ss_dssp             ECCC
T ss_pred             cccc
Confidence            7663

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=96.79  E-value=0.0011  Score=47.28  Aligned_cols=58  Identities=17%  Similarity=0.028  Sum_probs=45.9

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEE
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVF   82 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi   82 (248)
                      .+.||+|+|.|.+.-+|+-++..|.++|++|+++.....                            .+....++.|+||
T Consensus        34 ~l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~----------------------------~l~~~~~~ADivI   85 (166)
T d1b0aa1          34 DTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTK----------------------------NLRHHVENADLLI   85 (166)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCS----------------------------CHHHHHHHCSEEE
T ss_pred             ccccceEEEEeccccccHHHHHHHHHhhccccccccccc----------------------------hhHHHHhhhhHhh
Confidence            378999999999999999999999999999988754321                            1334445679999


Q ss_pred             EccccC
Q 025755           83 HVACPV   88 (248)
Q Consensus        83 ~~ag~~   88 (248)
                      .++|..
T Consensus        86 ~a~G~p   91 (166)
T d1b0aa1          86 VAVGKP   91 (166)
T ss_dssp             ECSCCT
T ss_pred             hhccCc
Confidence            888854

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=96.79  E-value=0.00071  Score=49.71  Aligned_cols=36  Identities=11%  Similarity=0.141  Sum_probs=30.5

Q ss_pred             CcEEEE-EcCccHHHHHHHHHHHHCCCeEEEEEcCCC
Q 025755            6 KERVCV-TGAGGYIASWLVKYLLLKGYMVHGTVRDPC   41 (248)
Q Consensus         6 ~k~vlV-tG~~g~iG~~~~~~l~~~g~~V~~~~r~~~   41 (248)
                      +.+++| +||+|++|...++.....|++|+++.|+..
T Consensus        29 g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~   65 (189)
T d1gu7a2          29 GKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRP   65 (189)
T ss_dssp             TTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCT
T ss_pred             CCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEeccc
Confidence            455666 699999999999998888999999988764

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=96.78  E-value=0.00097  Score=48.59  Aligned_cols=78  Identities=18%  Similarity=0.018  Sum_probs=49.0

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCC-CCCeEEEEccCCCHHHHHHHhCCCCEEEEcc
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGA-SENLQLFKTDLLDYEALCAATAGCTGVFHVA   85 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Di~d~~~~~~~~~~id~vi~~a   85 (248)
                      |+|.|.|+ |-.|.+++..|++.|++|++..|+.++............ .-.......++.-.+++++++++.|+||.+.
T Consensus         1 MkI~ViGa-G~~GtalA~~la~~g~~V~l~~r~~~~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ad~Ii~av   79 (180)
T d1txga2           1 MIVSILGA-GAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEVVLLGV   79 (180)
T ss_dssp             CEEEEESC-CHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSEEEECS
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCEEEEEEecccHHHHHHHhhhhhhhhhcchhccccccccccHHHHHhccchhhccc
Confidence            57888887 679999999999999999999986532211111111110 0011111222333567888899999998754

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=96.75  E-value=0.0011  Score=47.96  Aligned_cols=76  Identities=16%  Similarity=0.097  Sum_probs=48.4

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCC-eEEEEEcCCCchhhHHhhhhcCCCCCeEEEE-ccCCCHHHHHHHhC--CCCE
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGY-MVHGTVRDPCDEKNAHLKKLEGASENLQLFK-TDLLDYEALCAATA--GCTG   80 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~Di~d~~~~~~~~~--~id~   80 (248)
                      .+.+|+|.|+ |++|...++.+...|+ +|++++++..  +.+..+.+-   .. +++. -|-...+.+.+...  ++|+
T Consensus        27 ~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~--r~~~a~~lG---a~-~~i~~~~~~~~~~v~~~t~g~G~D~   99 (174)
T d1jqba2          27 MGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPI--CVEAAKFYG---AT-DILNYKNGHIEDQVMKLTNGKGVDR   99 (174)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHH--HHHHHHHHT---CS-EEECGGGSCHHHHHHHHTTTSCEEE
T ss_pred             CCCEEEEEcC-Ccchhhhhhhhhcccccccccccchhh--hHHHHHhhC---cc-ccccccchhHHHHHHHHhhccCcce
Confidence            4679999976 8999999999888897 6888887653  223233321   11 2221 22122344555543  4899


Q ss_pred             EEEcccc
Q 025755           81 VFHVACP   87 (248)
Q Consensus        81 vi~~ag~   87 (248)
                      ||.++|.
T Consensus       100 vid~~g~  106 (174)
T d1jqba2         100 VIMAGGG  106 (174)
T ss_dssp             EEECSSC
T ss_pred             EEEccCC
Confidence            9999975

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.74  E-value=0.00094  Score=47.09  Aligned_cols=37  Identities=16%  Similarity=0.157  Sum_probs=32.8

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCC
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDP   40 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~   40 (248)
                      ++++|+|||+|| |.+|.+-++.|++.|++|++++...
T Consensus        10 ~l~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap~~   46 (150)
T d1kyqa1          10 QLKDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSPDL   46 (150)
T ss_dssp             CCTTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred             eeCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCC
Confidence            478999999999 6699999999999999999996543

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=96.74  E-value=0.0018  Score=44.23  Aligned_cols=69  Identities=16%  Similarity=0.093  Sum_probs=50.0

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHH-hCCCCEEEEcc
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAA-TAGCTGVFHVA   85 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~-~~~id~vi~~a   85 (248)
                      |+++|.|. |.+|..++++|  +|+.|+++..++...  ....     ..++.++.+|.+|++.++++ +++++.+|-+.
T Consensus         1 kHivI~G~-g~~g~~l~~~L--~~~~i~vi~~d~~~~--~~~~-----~~~~~~i~Gd~~~~~~L~~a~i~~A~~vi~~~   70 (129)
T d2fy8a1           1 RHVVICGW-SESTLECLREL--RGSEVFVLAEDENVR--KKVL-----RSGANFVHGDPTRVSDLEKANVRGARAVIVNL   70 (129)
T ss_dssp             CCEEEESC-CHHHHHHHHTS--CGGGEEEEESCTTHH--HHHH-----HTTCEEEESCTTSHHHHHHTTCTTCSEEEECC
T ss_pred             CEEEEECC-CHHHHHHHHHH--cCCCCEEEEcchHHH--HHHH-----hcCccccccccCCHHHHHHhhhhcCcEEEEec
Confidence            57888885 67899999998  467788888776422  1111     23678999999999999886 34677777443

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.59  E-value=0.0014  Score=48.67  Aligned_cols=33  Identities=21%  Similarity=0.264  Sum_probs=29.2

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCC
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDP   40 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~   40 (248)
                      |+|.|. |.|.+|..++..|++.|++|++++.+.
T Consensus         1 MkI~Vi-GlG~vGl~~a~~la~~g~~V~g~D~n~   33 (202)
T d1mv8a2           1 MRISIF-GLGYVGAVCAGCLSARGHEVIGVDVSS   33 (202)
T ss_dssp             CEEEEE-CCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred             CEEEEE-CCCHhHHHHHHHHHhCCCcEEEEeCCH
Confidence            467777 789999999999999999999998775

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.56  E-value=0.0017  Score=46.39  Aligned_cols=35  Identities=17%  Similarity=0.228  Sum_probs=30.7

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCC
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPC   41 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~   41 (248)
                      |++|.|.| .|-+|+.+++.|+++||+|.+++|+..
T Consensus         1 M~kIg~IG-lG~MG~~iA~~L~~~g~~v~~~d~~~~   35 (162)
T d3cuma2           1 MKQIAFIG-LGHMGAPMATNLLKAGYLLNVFDLVQS   35 (162)
T ss_dssp             CCEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSSHH
T ss_pred             CCEEEEEE-EHHHHHHHHHHHHHCCCeEEEEECchh
Confidence            46888884 588999999999999999999998864

>d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=96.46  E-value=0.013  Score=39.85  Aligned_cols=88  Identities=17%  Similarity=0.099  Sum_probs=57.8

Q ss_pred             CCCcEEEEEcCc---cHHHHHHHHHHHHCC-CeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCC
Q 025755            4 EDKERVCVTGAG---GYIASWLVKYLLLKG-YMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCT   79 (248)
Q Consensus         4 l~~k~vlVtG~~---g~iG~~~~~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id   79 (248)
                      ++.|+|.|.|+|   +..|..+.+.|.+.| ++|+.+..+..+               +    ..+.-..++..+-..+|
T Consensus         6 f~PksIAVVGaS~~~~~~g~~v~~~L~~~~~g~v~pVnP~~~~---------------i----~G~~~y~sl~dlp~~vD   66 (129)
T d2csua1           6 FNPKGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNIKEEE---------------V----QGVKAYKSVKDIPDEID   66 (129)
T ss_dssp             TSCSEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEECSSCSE---------------E----TTEECBSSTTSCSSCCS
T ss_pred             CCCCeEEEEccCCCCCCcHHHHHHHHHHcCCCcEEEeccCccc---------------c----CCeEeecchhhcCCCCc
Confidence            567999999998   899999999987765 688877544321               1    01111122222334678


Q ss_pred             EEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEec
Q 025755           80 GVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSS  128 (248)
Q Consensus        80 ~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS  128 (248)
                      .++-+..                  -..+..+++.+.+.+.+.++.+|+
T Consensus        67 lvvi~vp------------------~~~~~~~~~~~~~~g~~~~vi~s~   97 (129)
T d2csua1          67 LAIIVVP------------------KRFVKDTLIQCGEKGVKGVVIITA   97 (129)
T ss_dssp             EEEECSC------------------HHHHHHHHHHHHHHTCCEEEECCC
T ss_pred             eEEEecC------------------hHHhHHHHHHHHHcCCCEEEEecc
Confidence            7775442                  123456788888889999999886

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.45  E-value=0.0037  Score=44.49  Aligned_cols=76  Identities=18%  Similarity=0.100  Sum_probs=47.2

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEEc
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFHV   84 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~~   84 (248)
                      .+.+|+|.|+ |.||...++.+...|++|++++++..  +.+..+.+   ..+..+..-|-...+.+.....+.|.+|-+
T Consensus        27 ~g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~~--r~~~~k~~---Ga~~~~~~~~~~~~~~~~~~~~~~~~~v~~  100 (168)
T d1rjwa2          27 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDE--KLELAKEL---GADLVVNPLKEDAAKFMKEKVGGVHAAVVT  100 (168)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHH--HHHHHHHT---TCSEEECTTTSCHHHHHHHHHSSEEEEEES
T ss_pred             CCCEEEEeec-ccchhhhhHHHhcCCCeEeccCCCHH--Hhhhhhhc---CcceecccccchhhhhcccccCCCceEEee
Confidence            4679999875 88999999999999999999987753  22233332   122211112211234456666667777766


Q ss_pred             cc
Q 025755           85 AC   86 (248)
Q Consensus        85 ag   86 (248)
                      ++
T Consensus       101 ~~  102 (168)
T d1rjwa2         101 AV  102 (168)
T ss_dssp             SC
T ss_pred             cC
Confidence            54

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=96.33  E-value=0.013  Score=42.01  Aligned_cols=76  Identities=13%  Similarity=0.034  Sum_probs=45.9

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEEE-EcCCCchhhHHhhhhcCCCCCeEEEEccCCC-HHHHHHHhC-CCCEE
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHGT-VRDPCDEKNAHLKKLEGASENLQLFKTDLLD-YEALCAATA-GCTGV   81 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d-~~~~~~~~~-~id~v   81 (248)
                      .+.+|+|.|+ |+||...++.+...|++++++ +++..  +.+..+++-    -.+++..+-.| .+.++++.. ++|+|
T Consensus        28 ~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~--k~~~a~~~G----a~~~i~~~~~~~~~~i~~~t~gg~D~v  100 (174)
T d1f8fa2          28 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVES--RLELAKQLG----ATHVINSKTQDPVAAIKEITDGGVNFA  100 (174)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHH--HHHHHHHHT----CSEEEETTTSCHHHHHHHHTTSCEEEE
T ss_pred             CCCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHH--HHHHHHHcC----CeEEEeCCCcCHHHHHHHHcCCCCcEE
Confidence            4679999987 899999999988889876554 44432  223333331    12333222222 223444332 58999


Q ss_pred             EEcccc
Q 025755           82 FHVACP   87 (248)
Q Consensus        82 i~~ag~   87 (248)
                      |.+.|.
T Consensus       101 id~~G~  106 (174)
T d1f8fa2         101 LESTGS  106 (174)
T ss_dssp             EECSCC
T ss_pred             EEcCCc
Confidence            999874

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.30  E-value=0.0029  Score=46.47  Aligned_cols=37  Identities=16%  Similarity=0.080  Sum_probs=33.4

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCC
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPC   41 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~   41 (248)
                      +.-|+|.|.|+ |-+|+.++..++..|++|++++++.+
T Consensus         2 ~~IkkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~   38 (192)
T d1f0ya2           2 IIVKHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTED   38 (192)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred             ceeEEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChH
Confidence            34589999999 88999999999999999999999874

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=96.29  E-value=0.013  Score=42.15  Aligned_cols=77  Identities=10%  Similarity=-0.007  Sum_probs=49.4

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCC-eEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCC-HHHHHHHh--CCCCE
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGY-MVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLD-YEALCAAT--AGCTG   80 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d-~~~~~~~~--~~id~   80 (248)
                      .+.+|+|+|+ |++|...++.+...|+ +|++++++.++  .+..+++   ..+..+-.-|-.+ .+.+.+..  .++|+
T Consensus        29 ~g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~k--l~~Ak~~---GA~~~in~~~~~~~~~~~~~~~~g~G~d~  102 (176)
T d1d1ta2          29 PGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDK--FEKAMAV---GATECISPKDSTKPISEVLSEMTGNNVGY  102 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGG--HHHHHHH---TCSEEECGGGCSSCHHHHHHHHHTSCCCE
T ss_pred             CCCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHH--HHHHHhc---CCcEEECccccchHHHHHHHHhccccceE
Confidence            4789999986 8999999999999995 79999988642  2222322   1222222222222 23344433  46999


Q ss_pred             EEEcccc
Q 025755           81 VFHVACP   87 (248)
Q Consensus        81 vi~~ag~   87 (248)
                      +|.+.|.
T Consensus       103 vi~~~g~  109 (176)
T d1d1ta2         103 TFEVIGH  109 (176)
T ss_dssp             EEECSCC
T ss_pred             EEEeCCc
Confidence            9999875

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=96.26  E-value=0.0027  Score=45.24  Aligned_cols=34  Identities=26%  Similarity=0.363  Sum_probs=29.8

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCC
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPC   41 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~   41 (248)
                      |+|.|.|. |.+|+.+++.|.+.|++|++++|+.+
T Consensus         1 MkI~iIG~-G~mG~~lA~~l~~~g~~V~~~d~~~~   34 (165)
T d2f1ka2           1 MKIGVVGL-GLIGASLAGDLRRRGHYLIGVSRQQS   34 (165)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred             CEEEEEee-cHHHHHHHHHHHHCCCEEEEEECCch
Confidence            46888865 99999999999999999999998853

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=96.26  E-value=0.0051  Score=45.19  Aligned_cols=74  Identities=22%  Similarity=0.142  Sum_probs=46.0

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCC-eEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCC---HHHHHHHhC--CC
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGY-MVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLD---YEALCAATA--GC   78 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d---~~~~~~~~~--~i   78 (248)
                      .+.+|+|.|+ |++|...+..+...|+ +|++++++..  +.+..+++   .  ...+ .|-.+   .+.+.++..  ++
T Consensus        25 ~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~--rl~~a~~~---G--a~~~-~~~~~~~~~~~i~~~t~g~g~   95 (195)
T d1kola2          25 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPA--RLAHAKAQ---G--FEIA-DLSLDTPLHEQIAALLGEPEV   95 (195)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHH--HHHHHHHT---T--CEEE-ETTSSSCHHHHHHHHHSSSCE
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHhhcccceeeecccch--hhHhhhhc---c--ccEE-EeCCCcCHHHHHHHHhCCCCc
Confidence            4789999986 8999888888877787 6777777653  22222222   1  1212 12222   234444443  58


Q ss_pred             CEEEEcccc
Q 025755           79 TGVFHVACP   87 (248)
Q Consensus        79 d~vi~~ag~   87 (248)
                      |++|.+.|.
T Consensus        96 D~vid~vG~  104 (195)
T d1kola2          96 DCAVDAVGF  104 (195)
T ss_dssp             EEEEECCCT
T ss_pred             EEEEECccc
Confidence            999999884

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=96.23  E-value=0.0084  Score=43.02  Aligned_cols=77  Identities=14%  Similarity=0.075  Sum_probs=46.9

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCC-eEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCC-HHHHHHHh--CCCCE
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGY-MVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLD-YEALCAAT--AGCTG   80 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d-~~~~~~~~--~~id~   80 (248)
                      .+.+|+|.|+ |++|...+..+...|+ +|++++++..+  .+..+++   ...-.+...|..+ .+...+..  .++|+
T Consensus        28 ~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k--~~~a~~~---Ga~~~i~~~~~~~~~~~~~~~~~~~G~D~  101 (176)
T d2jhfa2          28 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDK--FAKAKEV---GATECVNPQDYKKPIQEVLTEMSNGGVDF  101 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGG--HHHHHHT---TCSEEECGGGCSSCHHHHHHHHTTSCBSE
T ss_pred             CCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHH--HHHHHHh---CCeeEEecCCchhHHHHHHHHHhcCCCCE
Confidence            4689999999 6799999999998885 78888877642  2222222   1122222223222 22233322  36899


Q ss_pred             EEEcccc
Q 025755           81 VFHVACP   87 (248)
Q Consensus        81 vi~~ag~   87 (248)
                      +|.+.|.
T Consensus       102 vid~~G~  108 (176)
T d2jhfa2         102 SFEVIGR  108 (176)
T ss_dssp             EEECSCC
T ss_pred             EEecCCc
Confidence            9999875

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=96.19  E-value=0.012  Score=42.29  Aligned_cols=73  Identities=10%  Similarity=0.139  Sum_probs=49.0

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEEcc
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFHVA   85 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~~a   85 (248)
                      .++|-|.|- |-+|+.+++.|+++|++|++++|+++.. +...+.. .......    -....+++...+...|.++-+.
T Consensus         2 ~~nIg~IGl-G~MG~~mA~~L~~~G~~V~v~dr~~~~~-~~l~~~~-~~~~~~~----~a~~~~~~~~~~~~~~~ii~~~   74 (176)
T d2pgda2           2 QADIALIGL-AVMGQNLILNMNDHGFVVCAFNRTVSKV-DDFLANE-AKGTKVL----GAHSLEEMVSKLKKPRRIILLV   74 (176)
T ss_dssp             CBSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSTHHH-HHHHHTT-TTTSSCE----ECSSHHHHHHHBCSSCEEEECS
T ss_pred             CCcEEEEeE-hHHHHHHHHHHHHCCCeEEEEcCCHHHH-HHHHHhc-ccccccc----chhhhhhhhhhhcccceEEEec
Confidence            357788876 8899999999999999999999987422 2222211 1111111    1245677778888888888664

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=96.18  E-value=0.0049  Score=45.25  Aligned_cols=68  Identities=15%  Similarity=-0.048  Sum_probs=46.7

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEE
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVF   82 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi   82 (248)
                      ++.+|++.|.| .|.||+.+++.+..-|.+|+.+++..........               ++....+++.+++..|+|+
T Consensus        46 eL~gktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~---------------~~~~~~~l~~ll~~sD~i~  109 (193)
T d1mx3a1          46 RIRGETLGIIG-LGRVGQAVALRAKAFGFNVLFYDPYLSDGVERAL---------------GLQRVSTLQDLLFHSDCVT  109 (193)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSCTTHHHHH---------------TCEECSSHHHHHHHCSEEE
T ss_pred             eeeCceEEEec-cccccccceeeeeccccceeeccCcccccchhhh---------------ccccccchhhccccCCEEE
Confidence            37889999995 5679999999999999999999886542211110               1111234666677788876


Q ss_pred             Eccc
Q 025755           83 HVAC   86 (248)
Q Consensus        83 ~~ag   86 (248)
                      .+.-
T Consensus       110 ~~~p  113 (193)
T d1mx3a1         110 LHCG  113 (193)
T ss_dssp             ECCC
T ss_pred             Eeec
Confidence            6653

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.18  E-value=0.0016  Score=45.66  Aligned_cols=35  Identities=26%  Similarity=0.267  Sum_probs=27.3

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCC---eEEEEEcCC
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGY---MVHGTVRDP   40 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~---~V~~~~r~~   40 (248)
                      .++|.|.||||.+|.++++.|.+++|   ++..+..+.
T Consensus         2 ~mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~~   39 (144)
T d2hjsa1           2 PLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAE   39 (144)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeecc
Confidence            46899999999999999999976553   566554443

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.15  E-value=0.0027  Score=45.13  Aligned_cols=34  Identities=29%  Similarity=0.390  Sum_probs=29.5

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCC
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPC   41 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~   41 (248)
                      |+|-|.|- |-+|+.+++.|+++|++|++++|+++
T Consensus         1 MkIgiIGl-G~MG~~~A~~L~~~G~~V~~~d~~~~   34 (161)
T d1vpda2           1 MKVGFIGL-GIMGKPMSKNLLKAGYSLVVSDRNPE   34 (161)
T ss_dssp             CEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHH
T ss_pred             CEEEEEeh-hHHHHHHHHHHHHCCCeEEEEeCCcc
Confidence            36777755 88999999999999999999998864

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.13  E-value=0.0044  Score=45.13  Aligned_cols=66  Identities=18%  Similarity=0.034  Sum_probs=45.5

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEE
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFH   83 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~   83 (248)
                      +.+|++.|.| .|.||+.+++.+..-|.+|+++++..........        .+..        .+++.++++.|+|+.
T Consensus        42 l~~k~vgiiG-~G~IG~~va~~~~~fg~~v~~~d~~~~~~~~~~~--------~~~~--------~~l~ell~~sDiv~~  104 (184)
T d1ygya1          42 IFGKTVGVVG-LGRIGQLVAQRIAAFGAYVVAYDPYVSPARAAQL--------GIEL--------LSLDDLLARADFISV  104 (184)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSCHHHHHHH--------TCEE--------CCHHHHHHHCSEEEE
T ss_pred             ccceeeeecc-ccchhHHHHHHhhhccceEEeecCCCChhHHhhc--------Ccee--------ccHHHHHhhCCEEEE
Confidence            6788888887 6789999999999899999999876642211110        1111        235567778898876


Q ss_pred             ccc
Q 025755           84 VAC   86 (248)
Q Consensus        84 ~ag   86 (248)
                      +.-
T Consensus       105 ~~P  107 (184)
T d1ygya1         105 HLP  107 (184)
T ss_dssp             CCC
T ss_pred             cCC
Confidence            653

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=96.11  E-value=0.0042  Score=44.36  Aligned_cols=34  Identities=24%  Similarity=0.434  Sum_probs=28.5

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCC--eEEEEEcCC
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGY--MVHGTVRDP   40 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~--~V~~~~r~~   40 (248)
                      ||+|+|.| .|.+|..+++.|.+.|+  +|++++++.
T Consensus         1 Mk~I~IIG-~G~mG~sla~~L~~~g~~~~I~~~D~~~   36 (171)
T d2g5ca2           1 MQNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDINP   36 (171)
T ss_dssp             CCEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred             CCEEEEEc-cCHHHHHHHHHHHhcCCCeEEEEEECCh
Confidence            57899997 59999999999999996  677777665

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=96.07  E-value=0.0073  Score=43.47  Aligned_cols=76  Identities=14%  Similarity=0.079  Sum_probs=46.5

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCC-eEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCC--HHHHHHHh--CCCC
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGY-MVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLD--YEALCAAT--AGCT   79 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d--~~~~~~~~--~~id   79 (248)
                      .+.+|+|.|+ |+||...++.+...|+ +|++.+++..  +....+++    +--..+...-.|  ...+.+..  .++|
T Consensus        28 ~G~~VlV~G~-G~iGl~a~~~ak~~Ga~~Vi~~d~~~~--r~~~a~~~----Ga~~~i~~~~~~~~~~~~~~~~~~~G~d  100 (174)
T d1e3ia2          28 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGE--KFPKAKAL----GATDCLNPRELDKPVQDVITELTAGGVD  100 (174)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGG--GHHHHHHT----TCSEEECGGGCSSCHHHHHHHHHTSCBS
T ss_pred             CCCEEEEECC-ChHHHHHHHHHHHhCCceeeeeccchH--HHHHHHHh----CCCcccCCccchhhhhhhHhhhhcCCCc
Confidence            4689999975 9999999999999998 5667777653  22223332    111222211111  22222222  4689


Q ss_pred             EEEEcccc
Q 025755           80 GVFHVACP   87 (248)
Q Consensus        80 ~vi~~ag~   87 (248)
                      ++|.++|.
T Consensus       101 ~vie~~G~  108 (174)
T d1e3ia2         101 YSLDCAGT  108 (174)
T ss_dssp             EEEESSCC
T ss_pred             EEEEeccc
Confidence            99999974

>d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.06  E-value=0.013  Score=42.27  Aligned_cols=31  Identities=23%  Similarity=0.325  Sum_probs=26.2

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCC-CeEEEE
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKG-YMVHGT   36 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g-~~V~~~   36 (248)
                      |++|.|.||||.+|.++++.|..+. .++..+
T Consensus         1 MikVaIiGATGyvG~eLlrlL~~HP~~ei~~l   32 (179)
T d2g17a1           1 MLNTLIVGASGYAGAELVSYVNRHPHMTITAL   32 (179)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTTEEEEEE
T ss_pred             CcEEEEECcccHHHHHHHHHHHhCCCCceEee
Confidence            5799999999999999999999884 466543

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=95.99  E-value=0.016  Score=41.32  Aligned_cols=76  Identities=13%  Similarity=0.047  Sum_probs=45.2

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCC-eEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC--CCCEE
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGY-MVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATA--GCTGV   81 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~--~id~v   81 (248)
                      .+.+|+|.|+ |++|...++.+...|+ .|++++++..  +.+..+.+    ..-.++..+-.+.+...+...  ++|+|
T Consensus        32 ~g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~--k~~~~~~~----ga~~~i~~~~~~~~~~~~~~~~~g~d~v  104 (172)
T d1h2ba2          32 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEE--KLKLAERL----GADHVVDARRDPVKQVMELTRGRGVNVA  104 (172)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHH--HHHHHHHT----TCSEEEETTSCHHHHHHHHTTTCCEEEE
T ss_pred             CCCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhH--HHHHHhhc----ccceeecCcccHHHHHHHhhCCCCceEE
Confidence            4678999885 9999999998877786 5566666542  22333322    112333322222233333332  58999


Q ss_pred             EEcccc
Q 025755           82 FHVACP   87 (248)
Q Consensus        82 i~~ag~   87 (248)
                      |.++|.
T Consensus       105 id~~g~  110 (172)
T d1h2ba2         105 MDFVGS  110 (172)
T ss_dssp             EESSCC
T ss_pred             EEecCc
Confidence            999874

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.98  E-value=0.0065  Score=43.09  Aligned_cols=68  Identities=16%  Similarity=0.019  Sum_probs=48.7

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEE
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFH   83 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~   83 (248)
                      +.+|+++|.|- |.||+.+|+.|...|++|++++.++-...+...               |-+....++.++...|++|-
T Consensus        22 l~Gk~v~V~Gy-G~iG~g~A~~~rg~G~~V~v~e~dp~~al~A~~---------------dG~~v~~~~~a~~~adivvt   85 (163)
T d1li4a1          22 IAGKVAVVAGY-GDVGKGCAQALRGFGARVIITEIDPINALQAAM---------------EGYEVTTMDEACQEGNIFVT   85 (163)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH---------------TTCEECCHHHHTTTCSEEEE
T ss_pred             ecCCEEEEecc-ccccHHHHHHHHhCCCeeEeeecccchhHHhhc---------------CceEeeehhhhhhhccEEEe
Confidence            68999999974 589999999999999999999988632222211               11222235566777888888


Q ss_pred             cccc
Q 025755           84 VACP   87 (248)
Q Consensus        84 ~ag~   87 (248)
                      +.|-
T Consensus        86 aTGn   89 (163)
T d1li4a1          86 TTGC   89 (163)
T ss_dssp             CSSC
T ss_pred             cCCC
Confidence            7764

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=95.98  E-value=0.00081  Score=48.87  Aligned_cols=37  Identities=16%  Similarity=0.032  Sum_probs=30.9

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCC
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPC   41 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~   41 (248)
                      .+++|+|+|.|+ ||.+++++..|.+.| +|+++.|+.+
T Consensus        15 ~~~~k~vlIlGa-GG~arai~~aL~~~~-~i~I~nR~~~   51 (177)
T d1nvta1          15 RVKDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVE   51 (177)
T ss_dssp             CCCSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHH
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHcccc-ceeeehhhhh
Confidence            378999999987 558999999987666 9999999874

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=95.95  E-value=0.0092  Score=42.67  Aligned_cols=76  Identities=14%  Similarity=0.104  Sum_probs=44.3

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCe-EEEEEcCCCchhhHHhhhhcCCCCCeEEEEc-cC-CCHHHHHHHh--CCCC
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYM-VHGTVRDPCDEKNAHLKKLEGASENLQLFKT-DL-LDYEALCAAT--AGCT   79 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-Di-~d~~~~~~~~--~~id   79 (248)
                      .+.+|+|.|+ |++|...++.+...|+. |++++++..  +.+..+++-.    -..+.. +- .+.....+..  .++|
T Consensus        28 ~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~--k~~~ak~lGa----~~~i~~~~~~~~~~~~~~~~~~~g~D  100 (176)
T d2fzwa2          28 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKD--KFARAKEFGA----TECINPQDFSKPIQEVLIEMTDGGVD  100 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGG--GHHHHHHHTC----SEEECGGGCSSCHHHHHHHHTTSCBS
T ss_pred             CCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHH--HHHHHHHhCC----cEEEeCCchhhHHHHHHHHHcCCCCc
Confidence            4789999997 58999999999989975 555555442  2233333311    122221 11 1222222222  3689


Q ss_pred             EEEEcccc
Q 025755           80 GVFHVACP   87 (248)
Q Consensus        80 ~vi~~ag~   87 (248)
                      ++|.+.|.
T Consensus       101 ~vid~~G~  108 (176)
T d2fzwa2         101 YSFECIGN  108 (176)
T ss_dssp             EEEECSCC
T ss_pred             EeeecCCC
Confidence            99999874

>d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Vibrio cholerae [TaxId: 666]

Probab=95.94  E-value=0.0098  Score=41.50  Aligned_cols=93  Identities=16%  Similarity=0.053  Sum_probs=53.0

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCC----CeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEE
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKG----YMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVF   82 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi   82 (248)
                      ++|.|.||||.+|.++++.|+++.    .++..+..+....+.      .....+. ....+..+.+.    ++++|+++
T Consensus         1 mKVaIiGATGyvG~eLi~lLl~~~~~p~~~i~~~ss~~~~gk~------~~~~~~~-~~~~~~~~~~~----~~~~DvvF   69 (147)
T d1mb4a1           1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIGVPA------PNFGKDA-GMLHDAFDIES----LKQLDAVI   69 (147)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSCCSSBC------CCSSSCC-CBCEETTCHHH----HTTCSEEE
T ss_pred             CEEEEECCccHHHHHHHHHHHhcCCCCceEEEEeccccccccc------cccCCcc-eeeecccchhh----hccccEEE
Confidence            479999999999999999998754    344444433321111      0001111 11112233332    46789998


Q ss_pred             EccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCC-EEEEEec
Q 025755           83 HVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVK-RVVVVSS  128 (248)
Q Consensus        83 ~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~-~iV~vSS  128 (248)
                      .+...                  .-+..+.+.+.+.+.+ .+|=.||
T Consensus        70 ~alp~------------------~~s~~~~~~l~~~g~~~~VIDlSs   98 (147)
T d1mb4a1          70 TCQGG------------------SYTEKVYPALRQAGWKGYWIDAAS   98 (147)
T ss_dssp             ECSCH------------------HHHHHHHHHHHHTTCCSEEEESSS
T ss_pred             EecCc------------------hHHHHHhHHHHHcCCceEEEeCCc
Confidence            87732                  1145677777777654 4666665

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=95.94  E-value=0.0057  Score=42.92  Aligned_cols=64  Identities=19%  Similarity=0.190  Sum_probs=42.8

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEEcc
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFHVA   85 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~~a   85 (248)
                      +||.|.| .|-+|+.+++.|+++|++|++.++++.+......+..     .+    .+     +...+++..|+||-+.
T Consensus         1 MkIgiIG-~G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~-----~~----~~-----~~~e~~~~~diIi~~v   64 (152)
T d1i36a2           1 LRVGFIG-FGEVAQTLASRLRSRGVEVVTSLEGRSPSTIERARTV-----GV----TE-----TSEEDVYSCPVVISAV   64 (152)
T ss_dssp             CEEEEES-CSHHHHHHHHHHHHTTCEEEECCTTCCHHHHHHHHHH-----TC----EE-----CCHHHHHTSSEEEECS
T ss_pred             CEEEEEc-HHHHHHHHHHHHHHCCCeEEEEcCchhHHHHHhhhcc-----cc----cc-----cHHHHHhhcCeEEEEe
Confidence            3677774 5999999999999999999998877653322221111     11    11     1334567899998765

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=95.91  E-value=0.014  Score=41.36  Aligned_cols=91  Identities=25%  Similarity=0.300  Sum_probs=53.2

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHC-CCeEEEE-EcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEE
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLK-GYMVHGT-VRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFH   83 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~-g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~   83 (248)
                      ..+|.|.|++|.+|+.+++.+.+. +.+++.. +|............+....      ..++.-.+++..+++.+|+||.
T Consensus         4 ~ikI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~~g~d~~~~~~~~------~~~~~~~~~~~~~~~~~DViID   77 (162)
T d1diha1           4 NIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAG------KTGVTVQSSLDAVKDDFDVFID   77 (162)
T ss_dssp             BEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSS------CCSCCEESCSTTTTTSCSEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecccchhccchhhhhhccc------cCCceeeccHHHHhcccceEEE
Confidence            468999999999999999999885 6676643 4433211111111111110      1111112233445678899997


Q ss_pred             ccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCC
Q 025755           84 VACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKV  120 (248)
Q Consensus        84 ~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~  120 (248)
                      ..-+                  .++...++.|.+.+.
T Consensus        78 Fs~p------------------~~~~~~~~~a~~~~~   96 (162)
T d1diha1          78 FTRP------------------EGTLNHLAFCRQHGK   96 (162)
T ss_dssp             CSCH------------------HHHHHHHHHHHHTTC
T ss_pred             eccH------------------HHHHHHHHHHHhccc
Confidence            7632                  335567888888874

>d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Thermotoga maritima [TaxId: 2336]

Probab=95.85  E-value=0.021  Score=40.99  Aligned_cols=32  Identities=25%  Similarity=0.183  Sum_probs=26.5

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCC-eEEEEE
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGY-MVHGTV   37 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~-~V~~~~   37 (248)
                      |.+|.|.||||.+|..+++.|.++.+ ++..+.
T Consensus         1 MikVaIvGATGyvG~eLirlL~~HP~~ei~~l~   33 (176)
T d1vkna1           1 MIRAGIIGATGYTGLELVRLLKNHPEAKITYLS   33 (176)
T ss_dssp             CEEEEEESTTSHHHHHHHHHHHHCTTEEEEEEE
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhCCCceEEEee
Confidence            56999999999999999999998753 555554

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=95.80  E-value=0.0085  Score=45.11  Aligned_cols=39  Identities=36%  Similarity=0.401  Sum_probs=32.3

Q ss_pred             CCCCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCC
Q 025755            1 MSGEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDP   40 (248)
Q Consensus         1 m~~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~   40 (248)
                      ||.-..|+|+|.|| |-.|..+|..|.++|++|+++.|+.
T Consensus         1 ~~~~~~~kVvVIGa-GiaGl~~A~~L~~~G~~V~vier~~   39 (268)
T d1c0pa1           1 LMMHSQKRVVVLGS-GVIGLSSALILARKGYSVHILARDL   39 (268)
T ss_dssp             CCCCCSCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CCCCCCCcEEEECc-cHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            34345678888875 7899999999999999999999864

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=95.79  E-value=0.01  Score=43.19  Aligned_cols=69  Identities=16%  Similarity=-0.017  Sum_probs=46.8

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEE
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVF   82 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi   82 (248)
                      ++.++++.|.| .|.||+.++++|..-|.+|+.+++...........              .+....++..+++..|+|+
T Consensus        41 ~l~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~--------------~~~~~~~l~~~l~~sD~v~  105 (188)
T d2naca1          41 DLEAMHVGTVA-AGRIGLAVLRRLAPFDVHLHYTDRHRLPESVEKEL--------------NLTWHATREDMYPVCDVVT  105 (188)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHGGGTCEEEEECSSCCCHHHHHHH--------------TCEECSSHHHHGGGCSEEE
T ss_pred             eccccceeecc-ccccchhhhhhhhccCceEEEEeeccccccccccc--------------cccccCCHHHHHHhccchh
Confidence            46788999987 56799999999998999999999865322111111              0111234666778888876


Q ss_pred             Eccc
Q 025755           83 HVAC   86 (248)
Q Consensus        83 ~~ag   86 (248)
                      .+.-
T Consensus       106 ~~~p  109 (188)
T d2naca1         106 LNCP  109 (188)
T ss_dssp             ECSC
T ss_pred             hccc
Confidence            6553

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=95.75  E-value=0.023  Score=39.71  Aligned_cols=35  Identities=14%  Similarity=0.195  Sum_probs=29.2

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHC--CCeEEEEEcCC
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLK--GYMVHGTVRDP   40 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~--g~~V~~~~r~~   40 (248)
                      ||+|.|.|+||.||....+-+.+.  .++|+++.-+.
T Consensus         1 MK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~   37 (151)
T d1q0qa2           1 MKQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGK   37 (151)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESS
T ss_pred             CCeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecC
Confidence            689999999999999999888775  47888776544

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=95.74  E-value=0.0094  Score=42.80  Aligned_cols=76  Identities=13%  Similarity=0.027  Sum_probs=46.9

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCC-eEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCC--HHHHHHHh--CCCC
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGY-MVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLD--YEALCAAT--AGCT   79 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d--~~~~~~~~--~~id   79 (248)
                      .+.+|+|.|+ |++|...++.+...|+ +|++++++.+  +.+..+++    +--..+...-.|  .+...+..  .++|
T Consensus        27 ~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~--kl~~a~~l----Ga~~~i~~~~~d~~~~~~~~~~~~~G~d   99 (174)
T d1p0fa2          27 PGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKD--KFPKAIEL----GATECLNPKDYDKPIYEVICEKTNGGVD   99 (174)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGG--GHHHHHHT----TCSEEECGGGCSSCHHHHHHHHTTSCBS
T ss_pred             CCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHH--HHHHHHHc----CCcEEEcCCCchhHHHHHHHHhcCCCCc
Confidence            4789999985 8999999999988896 6788877753  22222222    122223211122  22333333  2689


Q ss_pred             EEEEcccc
Q 025755           80 GVFHVACP   87 (248)
Q Consensus        80 ~vi~~ag~   87 (248)
                      ++|.+.|.
T Consensus       100 ~vid~~g~  107 (174)
T d1p0fa2         100 YAVECAGR  107 (174)
T ss_dssp             EEEECSCC
T ss_pred             EEEEcCCC
Confidence            99998864

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=95.67  E-value=0.0086  Score=41.96  Aligned_cols=34  Identities=24%  Similarity=0.259  Sum_probs=29.4

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCC-CeEEEEEcCCC
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKG-YMVHGTVRDPC   41 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g-~~V~~~~r~~~   41 (248)
                      |+|.+.|+ |-+|.++++.|++.| ++|++++|+.+
T Consensus         1 MkI~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~~~   35 (152)
T d1yqga2           1 MNVYFLGG-GNMAAAVAGGLVKQGGYRIYIANRGAE   35 (152)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHCSCEEEEECSSHH
T ss_pred             CEEEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCChh
Confidence            47888876 899999999999887 89999999864

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=95.65  E-value=0.0073  Score=44.41  Aligned_cols=66  Identities=15%  Similarity=-0.066  Sum_probs=45.8

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEE
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVF   82 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi   82 (248)
                      ++.+|+|.|.|- |.||+.+++.|..-|.+|+++++.....  ....               ....+++.++++..|+|+
T Consensus        40 el~gk~vgIiG~-G~IG~~va~~l~~fg~~V~~~d~~~~~~--~~~~---------------~~~~~~l~~~l~~sDii~  101 (197)
T d1j4aa1          40 EVRDQVVGVVGT-GHIGQVFMQIMEGFGAKVITYDIFRNPE--LEKK---------------GYYVDSLDDLYKQADVIS  101 (197)
T ss_dssp             CGGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCHH--HHHT---------------TCBCSCHHHHHHHCSEEE
T ss_pred             cccCCeEEEecc-cccchhHHHhHhhhcccccccCcccccc--cccc---------------eeeecccccccccccccc
Confidence            367899999975 6699999999999999999988765311  1100               011234666777789877


Q ss_pred             Eccc
Q 025755           83 HVAC   86 (248)
Q Consensus        83 ~~ag   86 (248)
                      .+.-
T Consensus       102 ~~~p  105 (197)
T d1j4aa1         102 LHVP  105 (197)
T ss_dssp             ECSC
T ss_pred             ccCC
Confidence            6653

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=95.64  E-value=0.0048  Score=45.00  Aligned_cols=35  Identities=17%  Similarity=0.098  Sum_probs=32.1

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCC
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPC   41 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~   41 (248)
                      -|+|.|.|+ |-+|+.++..++..|++|++++++.+
T Consensus         4 I~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~   38 (186)
T d1wdka3           4 VKQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEH   38 (186)
T ss_dssp             CSSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHH
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHH
Confidence            478999999 88999999999999999999999874

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=95.54  E-value=0.011  Score=43.48  Aligned_cols=37  Identities=22%  Similarity=0.108  Sum_probs=33.1

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCC
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDP   40 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~   40 (248)
                      ++++|+|+|-| -|.+|+++++.|.+.|++|++.+.+.
T Consensus        24 ~L~gk~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~d~   60 (201)
T d1c1da1          24 SLDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDT   60 (201)
T ss_dssp             CSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEecchH
Confidence            58899999987 77799999999999999999887765

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=95.52  E-value=0.014  Score=39.16  Aligned_cols=35  Identities=26%  Similarity=0.292  Sum_probs=30.2

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCC
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPC   41 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~   41 (248)
                      .++++|.| +|++|.++|..|.+.|.+|+++.+++.
T Consensus        30 ~~~vvIIG-gG~iG~E~A~~l~~~g~~Vtli~~~~~   64 (121)
T d1d7ya2          30 QSRLLIVG-GGVIGLELAATARTAGVHVSLVETQPR   64 (121)
T ss_dssp             TCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCeEEEEC-cchhHHHHHHHhhcccceEEEEeeccc
Confidence            57777765 588999999999999999999998764

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=95.49  E-value=0.018  Score=41.88  Aligned_cols=65  Identities=12%  Similarity=-0.119  Sum_probs=46.0

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEE
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFH   83 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~   83 (248)
                      +.++++.|. |.|.||+.+++.+..-|.+|+..++......           ...  ...     ++++++++..|+|+.
T Consensus        42 l~~~~vgii-G~G~IG~~va~~l~~fg~~v~~~d~~~~~~~-----------~~~--~~~-----~~l~ell~~sDii~i  102 (188)
T d1sc6a1          42 ARGKKLGII-GYGHIGTQLGILAESLGMYVYFYDIENKLPL-----------GNA--TQV-----QHLSDLLNMSDVVSL  102 (188)
T ss_dssp             STTCEEEEE-CCSHHHHHHHHHHHHTTCEEEEECSSCCCCC-----------TTC--EEC-----SCHHHHHHHCSEEEE
T ss_pred             ccceEEEEe-ecccchhhhhhhcccccceEeeccccccchh-----------hhh--hhh-----hhHHHHHhhccceee
Confidence            678899988 5678999999999999999999987643110           011  111     246677778898876


Q ss_pred             cccc
Q 025755           84 VACP   87 (248)
Q Consensus        84 ~ag~   87 (248)
                      +...
T Consensus       103 ~~pl  106 (188)
T d1sc6a1         103 HVPE  106 (188)
T ss_dssp             CCCS
T ss_pred             cccC
Confidence            6643

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=95.36  E-value=0.017  Score=38.40  Aligned_cols=35  Identities=23%  Similarity=0.086  Sum_probs=30.4

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCC
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPC   41 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~   41 (248)
                      .|+++|.|| |.+|.++|..|.+.|.+|+++.|...
T Consensus        22 p~~v~IiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~   56 (117)
T d1ebda2          22 PKSLVVIGG-GYIGIELGTAYANFGTKVTILEGAGE   56 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCeEEEECC-CccceeeeeeecccccEEEEEEecce
Confidence            478888865 78999999999999999999998763

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=95.33  E-value=0.018  Score=38.70  Aligned_cols=35  Identities=20%  Similarity=0.103  Sum_probs=30.5

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCC
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDP   40 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~   40 (248)
                      +.|+|+|. |+|++|.+++..|.+.|.+|+++.+..
T Consensus        29 ~~k~vvVi-GgG~iG~E~A~~l~~~g~~Vtlie~~~   63 (123)
T d1nhpa2          29 EVNNVVVI-GSGYIGIEAAEAFAKAGKKVTVIDILD   63 (123)
T ss_dssp             TCCEEEEE-CCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CCCEEEEE-CChHHHHHHHHHhhccceEEEEEEecC
Confidence            46788887 557999999999999999999998875

>d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative semialdehyde dehydrogenase
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=95.33  E-value=0.016  Score=41.96  Aligned_cols=34  Identities=24%  Similarity=0.356  Sum_probs=27.5

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCC-eEEEEE
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGY-MVHGTV   37 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~-~V~~~~   37 (248)
                      -++.+|.|.||||..|.++++.|.++.+ ++..+.
T Consensus         3 ~~kikVaIlGATGyvG~elirLL~~HP~~ei~~l~   37 (183)
T d2cvoa1           3 GEEVRIAVLGASGYTGAEIVRLLANHPQFRIKVMT   37 (183)
T ss_dssp             SSCEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEE
T ss_pred             CCccEEEEECcccHHHHHHHHHHHhCCCceEEEEe
Confidence            3566899999999999999999998753 555444

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=95.32  E-value=0.007  Score=44.62  Aligned_cols=63  Identities=16%  Similarity=0.054  Sum_probs=44.1

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEE
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFH   83 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~   83 (248)
                      +.+|++.|.|. |.||+.+++.|..-|.+|+++++......          ...+.     .   .+++.+++..|+|+.
T Consensus        43 l~~ktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~----------~~~~~-----~---~~l~~l~~~~D~v~~  103 (199)
T d1dxya1          43 LGQQTVGVMGT-GHIGQVAIKLFKGFGAKVIAYDPYPMKGD----------HPDFD-----Y---VSLEDLFKQSDVIDL  103 (199)
T ss_dssp             GGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSSC----------CTTCE-----E---CCHHHHHHHCSEEEE
T ss_pred             ccceeeeeeec-ccccccccccccccceeeeccCCccchhh----------hcchh-----H---HHHHHHHHhccccee
Confidence            56889999875 56999999999999999999987653210          11111     1   235566677898776


Q ss_pred             cc
Q 025755           84 VA   85 (248)
Q Consensus        84 ~a   85 (248)
                      +.
T Consensus       104 ~~  105 (199)
T d1dxya1         104 HV  105 (199)
T ss_dssp             CC
T ss_pred             ee
Confidence            55

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=95.31  E-value=0.0095  Score=41.77  Aligned_cols=65  Identities=12%  Similarity=-0.052  Sum_probs=42.4

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEEcc
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFHVA   85 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~~a   85 (248)
                      |+|.+. |+|-+|+++++.|++.|++|++.+|+.+. .....+...     +.     ..  .+.+.++++.|+||-+.
T Consensus         1 MkIg~I-G~G~mG~al~~~l~~~~~~i~v~~r~~~~-~~~l~~~~g-----~~-----~~--~~~~~~~~~~dvIilav   65 (152)
T d2ahra2           1 MKIGII-GVGKMASAIIKGLKQTPHELIISGSSLER-SKEIAEQLA-----LP-----YA--MSHQDLIDQVDLVILGI   65 (152)
T ss_dssp             CEEEEE-CCSHHHHHHHHHHTTSSCEEEEECSSHHH-HHHHHHHHT-----CC-----BC--SSHHHHHHTCSEEEECS
T ss_pred             CEEEEE-eccHHHHHHHHHHHhCCCeEEEEcChHHh-HHhhccccc-----ee-----ee--chhhhhhhccceeeeec
Confidence            356777 67789999999999999999999987632 222222211     11     11  12445566899998664

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=95.21  E-value=0.014  Score=42.56  Aligned_cols=69  Identities=12%  Similarity=-0.097  Sum_probs=46.4

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEE
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFH   83 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~   83 (248)
                      +.+|++.|.|. |.||+.+++.+..-|.+|+.+++...........              .....++++.+++..|+|+.
T Consensus        45 l~g~tvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~--------------~~~~~~~l~~ll~~sD~v~l  109 (191)
T d1gdha1          45 LDNKTLGIYGF-GSIGQALAKRAQGFDMDIDYFDTHRASSSDEASY--------------QATFHDSLDSLLSVSQFFSL  109 (191)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSCCCHHHHHHH--------------TCEECSSHHHHHHHCSEEEE
T ss_pred             ecccceEEeec-ccchHHHHHHHHhhccccccccccccccchhhcc--------------cccccCCHHHHHhhCCeEEe
Confidence            56899999875 5699999999999999999998765422211111              00111346677778898876


Q ss_pred             cccc
Q 025755           84 VACP   87 (248)
Q Consensus        84 ~ag~   87 (248)
                      +.-.
T Consensus       110 ~~pl  113 (191)
T d1gdha1         110 NAPS  113 (191)
T ss_dssp             CCCC
T ss_pred             cCCC
Confidence            5533

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=95.12  E-value=0.024  Score=42.87  Aligned_cols=104  Identities=21%  Similarity=0.179  Sum_probs=61.2

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCC-eEEEEEcCCCchhh------------------HHhhhhcCCCCCeEEEEcc
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGY-MVHGTVRDPCDEKN------------------AHLKKLEGASENLQLFKTD   64 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~------------------~~~~~~~~~~~~~~~~~~D   64 (248)
                      +++++|+|.| .||+|++++..|++.|- ++++++.+.-+...                  ...+.+....+.+.+...+
T Consensus        28 L~~~~VliiG-~GglGs~va~~La~~Gvg~i~lvD~D~Ve~sNL~RQ~l~~~~diG~~K~~~a~~~l~~~np~~~i~~~~  106 (247)
T d1jw9b_          28 LKDSRVLIVG-LGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVN  106 (247)
T ss_dssp             HHHCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEC
T ss_pred             HhCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCcccchhhhhhhccccHhhcCchHHHHHHHHHHHhhcccchhhhh
Confidence            4568999999 56699999999999996 77787654421111                  0111122223444444444


Q ss_pred             CC-CHHHHHHHhCCCCEEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEE
Q 025755           65 LL-DYEALCAATAGCTGVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVV  126 (248)
Q Consensus        65 i~-d~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~v  126 (248)
                      .. +.+.....+...|++|.+.-                 |...-..+-+++.+.+. .+|+-
T Consensus       107 ~~~~~~~~~~~~~~~divid~~d-----------------~~~~~~~in~~~~~~~i-p~i~g  151 (247)
T d1jw9b_         107 ALLDDAELAALIAEHDLVLDCTD-----------------NVAVRNQLNAGCFAAKV-PLVSG  151 (247)
T ss_dssp             SCCCHHHHHHHHHTSSEEEECCS-----------------SHHHHHHHHHHHHHHTC-CEEEE
T ss_pred             hhhhhccccccccccceeeeccc-----------------hhhhhhhHHHHHHHhCC-Ccccc
Confidence            32 34455566667888876541                 22334456666777665 45554

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.11  E-value=0.0059  Score=50.46  Aligned_cols=35  Identities=37%  Similarity=0.482  Sum_probs=29.3

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCC-eEEEEEcCC
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGY-MVHGTVRDP   40 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~-~V~~~~r~~   40 (248)
                      ++.+|||.|+ ||+|.++++.|+..|. ++++++.+.
T Consensus        36 ~~~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D~   71 (426)
T d1yovb1          36 DTCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMDT   71 (426)
T ss_dssp             HHCCEEEECS-STTHHHHHHHHHTTTCCCEEEECCCB
T ss_pred             hcCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEECCC
Confidence            4568999999 5599999999999996 788887654

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=95.03  E-value=0.016  Score=39.37  Aligned_cols=30  Identities=17%  Similarity=0.122  Sum_probs=26.7

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCCCeEEEE
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKGYMVHGT   36 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~   36 (248)
                      ++|.|.|++|.+|+.+++.+.+.|+++++.
T Consensus         1 mki~i~G~~GrMG~~i~~~~~~~~~~l~~~   30 (128)
T d1vm6a3           1 MKYGIVGYSGRMGQEIQKVFSEKGHELVLK   30 (128)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHhcCCCeEEEE
Confidence            479999999999999999998999987754

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=95.02  E-value=0.02  Score=38.16  Aligned_cols=34  Identities=24%  Similarity=0.311  Sum_probs=29.7

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCC
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDP   40 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~   40 (248)
                      .|+++|.|| |.+|.+++..|.+.|.+|+++.|+.
T Consensus        22 p~~v~IiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~   55 (117)
T d1onfa2          22 SKKIGIVGS-GYIAVELINVIKRLGIDSYIFARGN   55 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSS
T ss_pred             CCEEEEECC-chHHHHHHHHHHhccccceeeehhc
Confidence            577777764 7899999999999999999999875

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=94.97  E-value=0.061  Score=37.38  Aligned_cols=36  Identities=22%  Similarity=0.239  Sum_probs=29.7

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHC--CCeEEEEEcCC
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLK--GYMVHGTVRDP   40 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~--g~~V~~~~r~~   40 (248)
                      ++|+|.|.|+||.||....+-+-+.  .++|+++.-..
T Consensus         1 ~pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~   38 (150)
T d1r0ka2           1 QPRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANR   38 (150)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESS
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCC
Confidence            4699999999999999999888765  48888776544

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.95  E-value=0.021  Score=38.31  Aligned_cols=35  Identities=20%  Similarity=0.158  Sum_probs=30.3

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCC
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPC   41 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~   41 (248)
                      .|+++|.|| |.||.+++..|.+.|.+|+++.++..
T Consensus        23 p~~~vIiG~-G~ig~E~A~~l~~lG~~Vtii~~~~~   57 (122)
T d1v59a2          23 PKRLTIIGG-GIIGLEMGSVYSRLGSKVTVVEFQPQ   57 (122)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCeEEEECC-CchHHHHHHHHHhhCcceeEEEeccc
Confidence            478888865 78999999999999999999988763

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=94.90  E-value=0.028  Score=37.49  Aligned_cols=35  Identities=23%  Similarity=0.021  Sum_probs=30.5

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCC
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPC   41 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~   41 (248)
                      .++++|.|| |.||.++|..|.+.|.+|+++.++..
T Consensus        22 p~~i~IiG~-G~ig~E~A~~l~~~G~~Vtiv~~~~~   56 (119)
T d3lada2          22 PGKLGVIGA-GVIGLELGSVWARLGAEVTVLEAMDK   56 (119)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCeEEEECC-ChHHHHHHHHHHHcCCceEEEEeecc
Confidence            478888865 78999999999999999999998763

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=94.87  E-value=0.023  Score=37.68  Aligned_cols=35  Identities=31%  Similarity=0.208  Sum_probs=29.8

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCC
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPC   41 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~   41 (248)
                      .|+++|.| +|.+|.+++..|.+.|.+|+++.|...
T Consensus        21 p~~vvIiG-gG~ig~E~A~~l~~~G~~Vtlve~~~~   55 (116)
T d1gesa2          21 PERVAVVG-AGYIGVELGGVINGLGAKTHLFEMFDA   55 (116)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCEEEEEC-CChhhHHHHHHhhccccEEEEEeecch
Confidence            36777765 588999999999999999999998763

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=94.65  E-value=0.028  Score=39.58  Aligned_cols=69  Identities=17%  Similarity=0.034  Sum_probs=49.0

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEE
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFH   83 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~   83 (248)
                      +.+|+++|.| -|.+|+.+|+.|...|.+|+++..++-...+...       +.++.        ..++++++..|++|-
T Consensus        21 laGk~vvV~G-YG~vGrG~A~~~rg~Ga~V~V~E~DPi~alqA~m-------dGf~v--------~~~~~a~~~aDi~vT   84 (163)
T d1v8ba1          21 ISGKIVVICG-YGDVGKGCASSMKGLGARVYITEIDPICAIQAVM-------EGFNV--------VTLDEIVDKGDFFIT   84 (163)
T ss_dssp             CTTSEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHT-------TTCEE--------CCHHHHTTTCSEEEE
T ss_pred             ecCCEEEEec-ccccchhHHHHHHhCCCEEEEEecCchhhHHHHh-------cCCcc--------CchhHccccCcEEEE
Confidence            6889999986 5779999999999999999999988632222221       22221        234567777888887


Q ss_pred             ccccC
Q 025755           84 VACPV   88 (248)
Q Consensus        84 ~ag~~   88 (248)
                      +.|-.
T Consensus        85 aTGn~   89 (163)
T d1v8ba1          85 CTGNV   89 (163)
T ss_dssp             CCSSS
T ss_pred             cCCCC
Confidence            77653

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=94.54  E-value=0.074  Score=37.58  Aligned_cols=77  Identities=14%  Similarity=0.045  Sum_probs=55.1

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEEc
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFHV   84 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~~   84 (248)
                      +.-+|+|.|+ |-.|...++...+.|.+|.+++.+....  +.++....  ..+.   .-..+.+.+.+.+++.|+||.+
T Consensus        31 ~pa~V~ViGa-GvaG~~A~~~A~~lGA~V~~~D~~~~~l--~~l~~~~~--~~~~---~~~~~~~~l~~~~~~aDivI~a  102 (168)
T d1pjca1          31 KPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERL--SYLETLFG--SRVE---LLYSNSAEIETAVAEADLLIGA  102 (168)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHH--HHHHHHHG--GGSE---EEECCHHHHHHHHHTCSEEEEC
T ss_pred             CCcEEEEECC-ChHHHHHHHHHhhCCCEEEEEeCcHHHH--HHHHHhhc--ccce---eehhhhhhHHHhhccCcEEEEe
Confidence            3568899876 5699999999999999999999886422  22222211  1222   3346778899999999999988


Q ss_pred             cccCC
Q 025755           85 ACPVP   89 (248)
Q Consensus        85 ag~~~   89 (248)
                      +-+..
T Consensus       103 alipG  107 (168)
T d1pjca1         103 VLVPG  107 (168)
T ss_dssp             CCCTT
T ss_pred             eecCC
Confidence            86543

>d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=94.47  E-value=0.028  Score=40.45  Aligned_cols=32  Identities=19%  Similarity=0.276  Sum_probs=25.8

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCC-CeEEEEEc
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKG-YMVHGTVR   38 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g-~~V~~~~r   38 (248)
                      |-||.|-| .|.||+.+++.+++++ .+|+.+..
T Consensus         1 MIKVaING-fGRIGR~v~Ral~~~~dievVaInd   33 (178)
T d1b7go1           1 MVNVAVNG-YGTIGKRVADAIIKQPDMKLVGVAK   33 (178)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHHTCTTEEEEEEEC
T ss_pred             CeEEEEEC-CCHHHHHHHHHHHhCCCCEEEEEEC
Confidence            35888998 7999999999999864 67776654

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=94.45  E-value=0.046  Score=36.23  Aligned_cols=37  Identities=24%  Similarity=0.131  Sum_probs=31.0

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCC
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPC   41 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~   41 (248)
                      ..+|+++|.| +|.+|..++..|.+.|.+|+++.|++.
T Consensus        20 ~~~~~vvVvG-gG~ig~E~A~~l~~~g~~vt~i~~~~~   56 (121)
T d1mo9a2          20 EPGSTVVVVG-GSKTAVEYGCFFNATGRRTVMLVRTEP   56 (121)
T ss_dssp             CCCSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHhcchhheEeeccch
Confidence            3467887775 578999999999999999999998753

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.42  E-value=0.034  Score=37.34  Aligned_cols=35  Identities=29%  Similarity=0.310  Sum_probs=30.6

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCC
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPC   41 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~   41 (248)
                      .|+++|.|| |+||.+++..|.+.|.+|+++.|+..
T Consensus        22 pk~vvIvGg-G~iG~E~A~~l~~~G~~Vtlv~~~~~   56 (125)
T d3grsa2          22 PGRSVIVGA-GYIAVEMAGILSALGSKTSLMIRHDK   56 (125)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCEEEEEcC-CccHHHHHHHHhcCCcEEEEEeeccc
Confidence            478888876 57999999999999999999999763

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=94.39  E-value=0.033  Score=38.85  Aligned_cols=35  Identities=20%  Similarity=0.112  Sum_probs=29.5

Q ss_pred             CcEEEEE-cCccHHHHHHHHHHHHCCCeEEEEEcCC
Q 025755            6 KERVCVT-GAGGYIASWLVKYLLLKGYMVHGTVRDP   40 (248)
Q Consensus         6 ~k~vlVt-G~~g~iG~~~~~~l~~~g~~V~~~~r~~   40 (248)
                      ++.++|. .++|+||.++++.|.+.|++|+++.+..
T Consensus        39 ~~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~   74 (156)
T d1djqa2          39 GKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH   74 (156)
T ss_dssp             CSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CCceEEEecCCChHHHHHHHHHHHcCCeEEEEecCC
Confidence            4555555 4779999999999999999999999875

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=94.34  E-value=0.041  Score=39.55  Aligned_cols=37  Identities=19%  Similarity=0.073  Sum_probs=32.5

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCC
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPC   41 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~   41 (248)
                      .+.|+|+|.|| |..|...+..|.++||+|+++.++..
T Consensus        41 ~~~k~V~IIGa-GPAGL~AA~~la~~G~~Vtl~E~~~~   77 (179)
T d1ps9a3          41 VQKKNLAVVGA-GPAGLAFAINAAARGHQVTLFDAHSE   77 (179)
T ss_dssp             SSCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred             CCCcEEEEECc-cHHHHHHHHHHHhhccceEEEeccCc
Confidence            45789999975 67999999999999999999998764

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=94.06  E-value=0.037  Score=43.50  Aligned_cols=36  Identities=22%  Similarity=0.324  Sum_probs=31.3

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCC
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPC   41 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~   41 (248)
                      ++|+|+|.|| |.-|..+|..|.++|++|+++.++..
T Consensus         1 k~KKI~IIGa-G~sGL~aA~~L~k~G~~V~viEk~~~   36 (314)
T d2bi7a1           1 KSKKILIVGA-GFSGAVIGRQLAEKGHQVHIIDQRDH   36 (314)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHhCCCCEEEEECCCC
Confidence            4689988875 78999999999999999999988764

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=94.05  E-value=0.11  Score=36.70  Aligned_cols=76  Identities=13%  Similarity=0.063  Sum_probs=43.7

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCC-eEEEEEcCCCchhhHHhhhhcCCCCCeEEEE-ccCCC-HHHHHHHh--CCCC
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGY-MVHGTVRDPCDEKNAHLKKLEGASENLQLFK-TDLLD-YEALCAAT--AGCT   79 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~Di~d-~~~~~~~~--~~id   79 (248)
                      .+.+|+|.|+ |++|...+..+...|. +|++++++..  +.+..+++   . --+.+. -+-.+ .+.+.+..  .++|
T Consensus        28 ~g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~--rl~~a~~~---G-Ad~~in~~~~~~~~~~~~~~~~~~G~d  100 (175)
T d1cdoa2          28 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPD--KFEKAKVF---G-ATDFVNPNDHSEPISQVLSKMTNGGVD  100 (175)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGG--GHHHHHHT---T-CCEEECGGGCSSCHHHHHHHHHTSCBS
T ss_pred             CCCEEEEEec-CCccchHHHHHHHHhhchheeecchHH--HHHHHHHc---C-CcEEEcCCCcchhHHHHHHhhccCCcc
Confidence            4689999986 5577777777777765 6777777653  22333332   1 112332 22221 23333333  3689


Q ss_pred             EEEEcccc
Q 025755           80 GVFHVACP   87 (248)
Q Consensus        80 ~vi~~ag~   87 (248)
                      +++.+.|.
T Consensus       101 ~vid~~G~  108 (175)
T d1cdoa2         101 FSLECVGN  108 (175)
T ss_dssp             EEEECSCC
T ss_pred             eeeeecCC
Confidence            99999874

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=94.02  E-value=0.031  Score=37.49  Aligned_cols=35  Identities=20%  Similarity=0.108  Sum_probs=30.0

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCC
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPC   41 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~   41 (248)
                      .++++|.| +|.||.++|..|.+.|.+|+++.|+..
T Consensus        25 p~~~viiG-~G~iglE~A~~~~~~G~~Vtvi~~~~~   59 (123)
T d1dxla2          25 PKKLVVIG-AGYIGLEMGSVWGRIGSEVTVVEFASE   59 (123)
T ss_dssp             CSEEEESC-CSHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CCeEEEEc-cchHHHHHHHHHHhcCCeEEEEEEccc
Confidence            46777776 578999999999999999999998764

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=93.89  E-value=0.35  Score=30.51  Aligned_cols=71  Identities=18%  Similarity=0.237  Sum_probs=46.0

Q ss_pred             CCcEEEEEcCccHHH-HHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEE
Q 025755            5 DKERVCVTGAGGYIA-SWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFH   83 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG-~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~   83 (248)
                      +.|++.+.|-+| +| +++|+.|.++|++|.+.++........ +.   .  ..+.+..++-.  +.    +++.|.||.
T Consensus         7 ~~~~ihfiGigG-~GMs~LA~~L~~~G~~VsGSD~~~~~~~~~-L~---~--~Gi~v~~g~~~--~~----i~~~d~vV~   73 (96)
T d1p3da1           7 RVQQIHFIGIGG-AGMSGIAEILLNEGYQISGSDIADGVVTQR-LA---Q--AGAKIYIGHAE--EH----IEGASVVVV   73 (96)
T ss_dssp             TCCEEEEETTTS-TTHHHHHHHHHHHTCEEEEEESCCSHHHHH-HH---H--TTCEEEESCCG--GG----GTTCSEEEE
T ss_pred             hCCEEEEEEECH-HHHHHHHHHHHhCCCEEEEEeCCCChhhhH-HH---H--CCCeEEECCcc--cc----CCCCCEEEE
Confidence            468999998655 33 667999999999999999875432222 22   2  23444443332  22    356899988


Q ss_pred             ccccC
Q 025755           84 VACPV   88 (248)
Q Consensus        84 ~ag~~   88 (248)
                      ..++.
T Consensus        74 S~AI~   78 (96)
T d1p3da1          74 SSAIK   78 (96)
T ss_dssp             CTTSC
T ss_pred             CCCcC
Confidence            87763

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=93.87  E-value=0.042  Score=39.17  Aligned_cols=33  Identities=24%  Similarity=0.165  Sum_probs=28.6

Q ss_pred             EEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCC
Q 025755            8 RVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPC   41 (248)
Q Consensus         8 ~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~   41 (248)
                      +|-|. |.|.+|..+++.|+++|++|++++|+.+
T Consensus         3 kIGvI-GlG~MG~~ma~~L~~~G~~V~~~dr~~~   35 (178)
T d1pgja2           3 DVGVV-GLGVMGANLALNIAEKGFKVAVFNRTYS   35 (178)
T ss_dssp             SEEEE-CCSHHHHHHHHHHHHTTCCEEEECSSHH
T ss_pred             EEEEE-eehHHHHHHHHHHHHCCCeEEEEECCHH
Confidence            56666 6788999999999999999999998864

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=93.85  E-value=0.033  Score=40.01  Aligned_cols=36  Identities=17%  Similarity=0.208  Sum_probs=30.7

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCC-eEEEEEcCCC
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGY-MVHGTVRDPC   41 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~-~V~~~~r~~~   41 (248)
                      .+|||+|.|| |..|...|..|.++|+ +|+++.++..
T Consensus         3 ~~~kVaIIGa-GpaGl~aA~~l~~~G~~~V~v~E~~~~   39 (196)
T d1gtea4           3 YSAKIALLGA-GPASISCASFLARLGYSDITIFEKQEY   39 (196)
T ss_dssp             GGCCEEEECC-SHHHHHHHHHHHHTTCCCEEEEESSSS
T ss_pred             CCCEEEEECC-hHHHHHHHHHHHHCCCCeEEEEEecCc
Confidence            3688999975 7799999999999998 5999988764

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=93.75  E-value=0.055  Score=36.70  Aligned_cols=36  Identities=22%  Similarity=0.241  Sum_probs=31.2

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCC
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPC   41 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~   41 (248)
                      ..++++|.| +|++|.+++..|.+.|.+|+++.+...
T Consensus        34 ~~k~v~VIG-gG~iG~E~A~~l~~~g~~Vtvie~~~~   69 (133)
T d1q1ra2          34 ADNRLVVIG-GGYIGLEVAATAIKANMHVTLLDTAAR   69 (133)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             cCCEEEEEC-CchHHHHHHHHHHhhCcceeeeeeccc
Confidence            467888885 589999999999999999999998764

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=93.72  E-value=0.16  Score=39.14  Aligned_cols=35  Identities=20%  Similarity=0.227  Sum_probs=30.7

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEc
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVR   38 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r   38 (248)
                      ++++|+|+|-|- |-+|+++++.|.+.|++|+.++-
T Consensus        33 ~L~gktvaIqGf-GnVG~~~A~~L~e~Gakvv~vsD   67 (293)
T d1hwxa1          33 GFGDKTFAVQGF-GNVGLHSMRYLHRFGAKCVAVGE   67 (293)
T ss_dssp             SSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEEE
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEEc
Confidence            478899998876 78999999999999999998764

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=93.70  E-value=0.17  Score=31.68  Aligned_cols=70  Identities=16%  Similarity=0.122  Sum_probs=43.3

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEEccc
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFHVAC   86 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~~ag   86 (248)
                      ++|-+.|-+|-==+++|+.|.++|+.|.+.++...+.. ..++   ..  .+.+..+  .+.+.    ++++|.||...+
T Consensus         2 ~~ihfiGIgG~GMs~LA~~L~~~G~~VsGSD~~~~~~t-~~L~---~~--Gi~i~~g--h~~~~----i~~~d~vV~SsA   69 (89)
T d1j6ua1           2 MKIHFVGIGGIGMSAVALHEFSNGNDVYGSNIEETERT-AYLR---KL--GIPIFVP--HSADN----WYDPDLVIKTPA   69 (89)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECSSCCHHH-HHHH---HT--TCCEESS--CCTTS----CCCCSEEEECTT
T ss_pred             cEEEEEeECHHHHHHHHHHHHhCCCeEEEEeCCCChhH-HHHH---HC--CCeEEee--ecccc----cCCCCEEEEecC
Confidence            57888875552223689999999999999998754222 2233   22  2333332  12222    256899998887


Q ss_pred             cC
Q 025755           87 PV   88 (248)
Q Consensus        87 ~~   88 (248)
                      +.
T Consensus        70 I~   71 (89)
T d1j6ua1          70 VR   71 (89)
T ss_dssp             CC
T ss_pred             cC
Confidence            74

>d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=93.70  E-value=0.0096  Score=42.61  Aligned_cols=115  Identities=10%  Similarity=-0.036  Sum_probs=61.1

Q ss_pred             cEEEEEcCc-cHHHHHHHHHHHHCC----CeEEEEEcCCCchhhHHhhh-----hcCCCCCeEEEEccCCCHHHHHHHhC
Q 025755            7 ERVCVTGAG-GYIASWLVKYLLLKG----YMVHGTVRDPCDEKNAHLKK-----LEGASENLQLFKTDLLDYEALCAATA   76 (248)
Q Consensus         7 k~vlVtG~~-g~iG~~~~~~l~~~g----~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~~~~~Di~d~~~~~~~~~   76 (248)
                      +||.|.||+ .+.+..++..++...    -++++++.+......+....     ......+..+.  .-+|   ....++
T Consensus         2 ~KI~iIGaGs~~~~~~~~~l~~~~~~~~~~eI~L~Di~e~~~~~~~~d~~~~~~~~~~~~~~~~~--~~td---~~~al~   76 (169)
T d1s6ya1           2 LKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGVPIEIH--LTLD---RRRALD   76 (169)
T ss_dssp             EEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCEEE--EESC---HHHHHT
T ss_pred             cEEEEECCChhhHHHHHHHHHHhccccCCCEEEEEcCCccHHHHHHHHHHHHHHHHhcCCCceee--ecCC---chhhcC
Confidence            578999964 456666666655432    37888887653221221111     11112222222  2233   345677


Q ss_pred             CCCEEEEccccCCCCCCCCc----------------c--ccchhhhHHHHHHHHHHHHhcCCCEEEEE
Q 025755           77 GCTGVFHVACPVPVGKVPNP----------------E--VQLIDPAVVGTKNVLNSCVKAKVKRVVVV  126 (248)
Q Consensus        77 ~id~vi~~ag~~~~~~~~~~----------------~--~~~~~~n~~g~~~~~~~~~~~~~~~iV~v  126 (248)
                      +.|+||..|+..........                .  .....-|+.-.+.+++.+.+.....++.+
T Consensus        77 gaDvVv~ta~~~~~~~~~r~~~i~~~~gi~~~~t~g~~~~~~~~~n~~i~~~i~~~i~~~~pda~~i~  144 (169)
T d1s6ya1          77 GADFVTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEELCPDAWLIN  144 (169)
T ss_dssp             TCSEEEECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEE
T ss_pred             CCCEEEEccccCCCCCeehhhhhhhhcCceeccccCcchhhhccccHHHHHHHHHHHhhcCCCeEEEE
Confidence            99999999987542100000                0  01123566667778888887755444444

>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=93.28  E-value=0.004  Score=44.83  Aligned_cols=116  Identities=16%  Similarity=-0.005  Sum_probs=63.2

Q ss_pred             CcEEEEEcCccHHHHH--HHHHHHHC----CCeEEEEEcCCCchhh--HHhhhh-cCCCCCeEEEEccCCCHHHHHHHhC
Q 025755            6 KERVCVTGAGGYIASW--LVKYLLLK----GYMVHGTVRDPCDEKN--AHLKKL-EGASENLQLFKTDLLDYEALCAATA   76 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~--~~~~l~~~----g~~V~~~~r~~~~~~~--~~~~~~-~~~~~~~~~~~~Di~d~~~~~~~~~   76 (248)
                      .+||.|.|| |.+|..  +...|+..    +.++++++++.+..+.  ...... ........+..     ..+.+.+++
T Consensus         2 ~mKI~iIGa-Gsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~i~~-----~td~~eaL~   75 (171)
T d1obba1           2 SVKIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEK-----TMNLDDVII   75 (171)
T ss_dssp             CCEEEEETT-TCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEE-----ESCHHHHHT
T ss_pred             CcEEEEECC-CHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCCeEEEE-----eCChhhccc
Confidence            368999996 667754  44445543    3589999998643221  111111 11122333322     123456778


Q ss_pred             CCCEEEEccccCCCCCC-----------------CCc-------cccchhhhHHHHHHHHHHHHhcCCC-EEEEEe
Q 025755           77 GCTGVFHVACPVPVGKV-----------------PNP-------EVQLIDPAVVGTKNVLNSCVKAKVK-RVVVVS  127 (248)
Q Consensus        77 ~id~vi~~ag~~~~~~~-----------------~~~-------~~~~~~~n~~g~~~~~~~~~~~~~~-~iV~vS  127 (248)
                      ++|+||+.++.......                 ...       -.....-|+.-.+.+++.+.+.... .+|++|
T Consensus        76 dad~Vv~~~~~g~~~~~~~~~~i~~~~g~~~~~~~~~~~~~g~~~~~~~~rn~~i~~~i~~~i~~~~p~a~~i~~T  151 (171)
T d1obba1          76 DADFVINTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKLSPKAWYLQAA  151 (171)
T ss_dssp             TCSEEEECCCTTHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             CCCeEeeecccccccceeeehhcchhhhhccCCCccccCCCCCcceeeecchHHHHHHHHHHHHHHCcCeEEEEEC
Confidence            99999999876432100                 000       0011234777788888888887543 455554

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=93.19  E-value=0.064  Score=36.00  Aligned_cols=34  Identities=12%  Similarity=0.030  Sum_probs=29.8

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCC
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDP   40 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~   40 (248)
                      .++++|.|| |.||.+++..|.+.|.+|+++.+..
T Consensus        26 p~~vvIiGg-G~IG~E~A~~~~~~G~~Vtive~~~   59 (125)
T d1ojta2          26 PGKLLIIGG-GIIGLEMGTVYSTLGSRLDVVEMMD   59 (125)
T ss_dssp             CSEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCeEEEECC-CHHHHHHHHHhhcCCCEEEEEEeec
Confidence            478888865 7899999999999999999998865

>d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PF0725
species: Pyrococcus furiosus [TaxId: 2261]

Probab=93.17  E-value=0.26  Score=32.38  Aligned_cols=32  Identities=25%  Similarity=0.374  Sum_probs=28.0

Q ss_pred             cEEEEEcCc---cHHHHHHHHHHHHCCCeEEEEEc
Q 025755            7 ERVCVTGAG---GYIASWLVKYLLLKGYMVHGTVR   38 (248)
Q Consensus         7 k~vlVtG~~---g~iG~~~~~~l~~~g~~V~~~~r   38 (248)
                      |+|.|.|++   +..|..+.+.|++.||+|+.+..
T Consensus         2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~~V~pVnP   36 (116)
T d1y81a1           2 RKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNP   36 (116)
T ss_dssp             CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECT
T ss_pred             cEEEEEcccCCCCCcHHHHHHHHHHCCCEEEEEcc
Confidence            789999988   57999999999999999887653

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=93.16  E-value=0.073  Score=37.71  Aligned_cols=80  Identities=11%  Similarity=-0.005  Sum_probs=44.7

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHC-----CCeEEEEEcCCCchh--hHHhhhhc-CCCCCeEEEEccCCCHHHHHHHhC
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLK-----GYMVHGTVRDPCDEK--NAHLKKLE-GASENLQLFKTDLLDYEALCAATA   76 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~-----g~~V~~~~r~~~~~~--~~~~~~~~-~~~~~~~~~~~Di~d~~~~~~~~~   76 (248)
                      +..||.|.||++.-...++..++.+     +-++++++.+.+..+  ...+.... ...........     .+..++++
T Consensus         2 k~~KI~iIGaGsv~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~eal~   76 (167)
T d1u8xx1           2 KSFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAAT-----TDPEEAFT   76 (167)
T ss_dssp             CCEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEE-----SCHHHHHS
T ss_pred             CCceEEEECCChhhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceEec-----CChhhccC
Confidence            3468999998664333455555543     137899988764322  11121111 11222333221     13556678


Q ss_pred             CCCEEEEccccCC
Q 025755           77 GCTGVFHVACPVP   89 (248)
Q Consensus        77 ~id~vi~~ag~~~   89 (248)
                      +.|+||..+|...
T Consensus        77 ~AD~Vvitag~~~   89 (167)
T d1u8xx1          77 DVDFVMAHIRVGK   89 (167)
T ss_dssp             SCSEEEECCCTTH
T ss_pred             CCCEEEECCCcCC
Confidence            9999999998754

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=93.10  E-value=0.04  Score=41.90  Aligned_cols=33  Identities=18%  Similarity=0.074  Sum_probs=29.4

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCC
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDP   40 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~   40 (248)
                      ++|+|+|| |--|...|..|.++|++|+++.++.
T Consensus         1 m~V~IIGa-G~aGL~aA~~L~~~G~~V~vlE~~~   33 (347)
T d2ivda1           1 MNVAVVGG-GISGLAVAHHLRSRGTDAVLLESSA   33 (347)
T ss_dssp             CCEEEECC-BHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCCCEEEEecCC
Confidence            36889988 8899999999999999999998765

>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=92.82  E-value=0.067  Score=37.31  Aligned_cols=25  Identities=28%  Similarity=0.335  Sum_probs=22.3

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCCC
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKGY   31 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g~   31 (248)
                      =+|.|.||||.+|.++++.|.++.+
T Consensus         2 ~kVaIvGATGyvG~eLirlL~~H~f   26 (154)
T d2gz1a1           2 YTVAVVGATGAVGAQMIKMLEESTL   26 (154)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHTCCS
T ss_pred             CEEEEECCCcHHHHHHHHHHHcCCC
Confidence            4799999999999999999888764

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=92.79  E-value=0.052  Score=41.14  Aligned_cols=31  Identities=26%  Similarity=0.243  Sum_probs=27.2

Q ss_pred             EEEEcCccHHHHHHHHHHHHCCCeEEEEEcCC
Q 025755            9 VCVTGAGGYIASWLVKYLLLKGYMVHGTVRDP   40 (248)
Q Consensus         9 vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~   40 (248)
                      |+|+| +|-+|..+|..|+++|++|+++.++.
T Consensus         7 vvIIG-aGi~Gls~A~~La~~G~~V~vlE~~~   37 (276)
T d1ryia1           7 AVVIG-GGIIGSAIAYYLAKENKNTALFESGT   37 (276)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            67775 57899999999999999999998864

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=92.79  E-value=0.25  Score=33.65  Aligned_cols=35  Identities=29%  Similarity=0.382  Sum_probs=30.3

Q ss_pred             CCcEEEEEcCc---cHHHHHHHHHHHHCCCeEEEEEcC
Q 025755            5 DKERVCVTGAG---GYIASWLVKYLLLKGYMVHGTVRD   39 (248)
Q Consensus         5 ~~k~vlVtG~~---g~iG~~~~~~l~~~g~~V~~~~r~   39 (248)
                      +.|+|.|.|++   +..|..+.+.|.+.|++|+.+...
T Consensus        18 ~~ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP~   55 (139)
T d2d59a1          18 RYKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPK   55 (139)
T ss_dssp             HCCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTT
T ss_pred             cCCeEEEEeecCCCCCchHHHHHHHHHCCCEEEEECCc
Confidence            46899999988   689999999999999998877543

>d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: Amyloid beta precursor protein-binding protein 1, APPBP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.74  E-value=0.13  Score=43.30  Aligned_cols=36  Identities=19%  Similarity=0.244  Sum_probs=29.5

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCC-eEEEEEcCC
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGY-MVHGTVRDP   40 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~-~V~~~~r~~   40 (248)
                      |.+.+|+|.|+ |++|.++++.|+..|. ++++++.+.
T Consensus        23 L~~s~VlvvG~-gglG~Ei~knLvl~GVg~itivD~d~   59 (529)
T d1yova1          23 LESAHVCLINA-TATGTEILKNLVLPGIGSFTIIDGNQ   59 (529)
T ss_dssp             HHHCEEEECCC-SHHHHHHHHHHHTTTCSEEEEECCSB
T ss_pred             HhCCCEEEECC-CHHHHHHHHHHHHhcCCEEEEEcCCc
Confidence            45679999987 6799999999999995 788876544

>d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Phosphopantothenoylcysteine synthetase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.66  E-value=0.15  Score=39.41  Aligned_cols=26  Identities=23%  Similarity=0.138  Sum_probs=23.3

Q ss_pred             ccHHHHHHHHHHHHCCCeEEEEEcCC
Q 025755           15 GGYIASWLVKYLLLKGYMVHGTVRDP   40 (248)
Q Consensus        15 ~g~iG~~~~~~l~~~g~~V~~~~r~~   40 (248)
                      ||..|.++|+.|+.+|++|+.+.+..
T Consensus        45 SGk~G~alA~~~~~~Ga~V~li~g~~   70 (290)
T d1p9oa_          45 SGRRGATSAEAFLAAGYGVLFLYRAR   70 (290)
T ss_dssp             CCHHHHHHHHHHHHTTCEEEEEEETT
T ss_pred             chHHHHHHHHHHHHcCCEEEEEecCC
Confidence            58899999999999999999987654

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=92.63  E-value=0.089  Score=39.37  Aligned_cols=35  Identities=23%  Similarity=0.196  Sum_probs=30.2

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCC
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDP   40 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~   40 (248)
                      ..+||+|.|| |..|..++..|.++|++|+++.|+.
T Consensus         3 ~~~kV~IiGa-G~aGl~~A~~L~~~G~~v~v~Er~~   37 (265)
T d2voua1           3 TTDRIAVVGG-SISGLTAALMLRDAGVDVDVYERSP   37 (265)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCCcEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            3578888875 7899999999999999999999865

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=92.56  E-value=0.2  Score=33.97  Aligned_cols=28  Identities=25%  Similarity=0.348  Sum_probs=23.6

Q ss_pred             EEEEEcCccHHHHHHHHHHHHC-CCeEEE
Q 025755            8 RVCVTGAGGYIASWLVKYLLLK-GYMVHG   35 (248)
Q Consensus         8 ~vlVtG~~g~iG~~~~~~l~~~-g~~V~~   35 (248)
                      ||.|.|++|.+|+.+++.+.+. ++++..
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~   29 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSA   29 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEE
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEE
Confidence            6899999999999999988764 567664

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=92.51  E-value=0.37  Score=34.31  Aligned_cols=81  Identities=16%  Similarity=0.042  Sum_probs=50.3

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEE-----E----------Ecc--CCCH
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQL-----F----------KTD--LLDY   68 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-----~----------~~D--i~d~   68 (248)
                      .-+|+|.|+ |-.|...++.....|+.|.+++.+....  +.++.+....-.+..     .          .-+  ....
T Consensus        29 pa~VvViGa-GvaG~~Aa~~A~~lGA~V~v~D~~~~~~--~~l~~l~~~~i~~~~~~~~~~~~~~gyA~~~s~~~~~~~~  105 (183)
T d1l7da1          29 PARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATK--EQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQA  105 (183)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTH--HHHHHTTCEECCC-----------------------CCHH
T ss_pred             CcEEEEEcC-cHHHHHHHHHHHHcCCEEEEEeccHHHH--HHHHHhhcceEEEeccccccccccccchhhcCHHHHHHHH
Confidence            347888876 5699999999999999999999887532  222222110000000     0          001  1234


Q ss_pred             HHHHHHhCCCCEEEEccccCC
Q 025755           69 EALCAATAGCTGVFHVACPVP   89 (248)
Q Consensus        69 ~~~~~~~~~id~vi~~ag~~~   89 (248)
                      +.+.+.+++.|+||-.+-+..
T Consensus       106 ~~l~~~l~~aDlVI~talipG  126 (183)
T d1l7da1         106 EAVLKELVKTDIAITTALIPG  126 (183)
T ss_dssp             HHHHHHHTTCSEEEECCCCTT
T ss_pred             HHHHHHHHhhhhheeeeecCC
Confidence            567777889999998876544

>d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Methanothermus fervidus [TaxId: 2180]

Probab=92.46  E-value=0.2  Score=35.40  Aligned_cols=31  Identities=16%  Similarity=0.250  Sum_probs=24.9

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCC-CeEEEEE
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKG-YMVHGTV   37 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g-~~V~~~~   37 (248)
                      |++|.|-| -|.||+.+.+.+++++ .+|+.+.
T Consensus         1 M~~VgING-fGRIGR~v~R~l~~~~di~vvaIn   32 (171)
T d1cf2o1           1 MKAVAING-YGTVGKRVADAIAQQDDMKVIGVS   32 (171)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHHTSSSEEEEEEE
T ss_pred             CeEEEEEc-CcHHHHHHHHHHHhCCCceEEEEe
Confidence            57899997 7999999999998876 5666554

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=92.38  E-value=0.075  Score=40.32  Aligned_cols=34  Identities=26%  Similarity=0.201  Sum_probs=29.4

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCC
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDP   40 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~   40 (248)
                      +|+|+|+|| |.-|...|.+|.+.|++|+++.++.
T Consensus         1 ~KkV~IIGa-G~aGL~aA~~La~~G~~V~vlE~~~   34 (373)
T d1seza1           1 AKRVAVIGA-GVSGLAAAYKLKIHGLNVTVFEAEG   34 (373)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTSCEEEEECSSS
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            588888864 6789999999999999999998765

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=92.24  E-value=0.091  Score=36.74  Aligned_cols=35  Identities=23%  Similarity=0.199  Sum_probs=28.8

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCC--eEEEEEcCC
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGY--MVHGTVRDP   40 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~--~V~~~~r~~   40 (248)
                      .+|+|+|.|| |.+|..++..|.+.+.  +|+++.++.
T Consensus         1 ~gkrivIvGg-G~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           1 AGRKVVVVGG-GTGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCCcEEEECc-cHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            4799999986 6789999999999875  778877654

>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermotoga maritima [TaxId: 2336]

Probab=92.21  E-value=0.24  Score=35.70  Aligned_cols=78  Identities=17%  Similarity=0.102  Sum_probs=54.0

Q ss_pred             EEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHh--CCCCEEEEccc
Q 025755            9 VCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAAT--AGCTGVFHVAC   86 (248)
Q Consensus         9 vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~--~~id~vi~~ag   86 (248)
                      +=+|-|+||.-+++.+.+ . +.+|++++++... .....+.+.....++.++.++..+...+..-+  ..+|.|+--.|
T Consensus        28 lD~t~G~Gghs~~il~~~-~-~~~vi~~D~d~~~-l~~a~~~l~~~~~r~~~~~~~f~~~~~~~~~~~~~~vdgIl~DlG  104 (192)
T d1m6ya2          28 LDCTVGEGGHSRAILEHC-P-GCRIIGIDVDSEV-LRIAEEKLKEFSDRVSLFKVSYREADFLLKTLGIEKVDGILMDLG  104 (192)
T ss_dssp             EETTCTTSHHHHHHHHHC-T-TCEEEEEESCHHH-HHHHHHHTGGGTTTEEEEECCGGGHHHHHHHTTCSCEEEEEEECS
T ss_pred             EEecCCCcHHHHHHHhcC-C-CCeEEEeechHHH-HHHHHHhhccccccccchhHHHhhHHHHHHHcCCCCcceeeeccc
Confidence            335668888888888776 3 5789999998742 22333334444678999999998766654443  47899988887


Q ss_pred             cCC
Q 025755           87 PVP   89 (248)
Q Consensus        87 ~~~   89 (248)
                      +..
T Consensus       105 vSs  107 (192)
T d1m6ya2         105 VST  107 (192)
T ss_dssp             CCH
T ss_pred             hhH
Confidence            754

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.84  E-value=0.25  Score=38.32  Aligned_cols=75  Identities=15%  Similarity=0.140  Sum_probs=47.2

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCC-eEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEE
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGY-MVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVF   82 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi   82 (248)
                      +++|+||-.|++.|+   ++-.+++.|+ +|++++.+.................++.++.+|+.+...   -.++.|+|+
T Consensus        34 ~~~~~VLDiGcG~G~---lsl~aa~~Ga~~V~aid~s~~~~~a~~~~~~~~~~~~i~~~~~~~~~l~~---~~~~~D~Iv  107 (311)
T d2fyta1          34 FKDKVVLDVGCGTGI---LSMFAAKAGAKKVLGVDQSEILYQAMDIIRLNKLEDTITLIKGKIEEVHL---PVEKVDVII  107 (311)
T ss_dssp             TTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSCC---SCSCEEEEE
T ss_pred             CCcCEEEEECCCCCH---HHHHHHHcCCCEEEEEeCHHHHHHHHHHHHHhCCCccceEEEeeHHHhcC---ccccceEEE
Confidence            578999999966554   3445566786 799998776321111112223345789999999976432   124679888


Q ss_pred             Ec
Q 025755           83 HV   84 (248)
Q Consensus        83 ~~   84 (248)
                      ..
T Consensus       108 se  109 (311)
T d2fyta1         108 SE  109 (311)
T ss_dssp             EC
T ss_pred             Ee
Confidence            53

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=91.53  E-value=1.5  Score=33.89  Aligned_cols=77  Identities=14%  Similarity=-0.057  Sum_probs=47.3

Q ss_pred             CCCcEEEEEc-CccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCC-CCCeEEEEccCCCHH-HHHHHhCCCCE
Q 025755            4 EDKERVCVTG-AGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGA-SENLQLFKTDLLDYE-ALCAATAGCTG   80 (248)
Q Consensus         4 l~~k~vlVtG-~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Di~d~~-~~~~~~~~id~   80 (248)
                      .++++||=.+ ++|+.+.+++    ..+.+|+.++.+... .....+..... -.++.++.+|..+.. .+.+.-+..|.
T Consensus       144 ~~g~rVLDl~~gtG~~s~~~a----~g~~~V~~vD~s~~a-l~~a~~n~~~ngl~~~~~i~~d~~~~~~~~~~~~~~fD~  218 (318)
T d1wxxa2         144 FRGERALDVFSYAGGFALHLA----LGFREVVAVDSSAEA-LRRAEENARLNGLGNVRVLEANAFDLLRRLEKEGERFDL  218 (318)
T ss_dssp             CCEEEEEEETCTTTHHHHHHH----HHEEEEEEEESCHHH-HHHHHHHHHHTTCTTEEEEESCHHHHHHHHHHTTCCEEE
T ss_pred             hCCCeeeccCCCCcHHHHHHH----hcCCcEEeecchHHH-HHHHHHHHHHcCCCCcceeeccHHHHhhhhHhhhcCCCE
Confidence            4677777666 6666665543    346789999988742 22222222222 246899999997632 23333346899


Q ss_pred             EEEcc
Q 025755           81 VFHVA   85 (248)
Q Consensus        81 vi~~a   85 (248)
                      ||...
T Consensus       219 Vi~Dp  223 (318)
T d1wxxa2         219 VVLDP  223 (318)
T ss_dssp             EEECC
T ss_pred             EEEcC
Confidence            99775

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=91.50  E-value=0.16  Score=38.16  Aligned_cols=35  Identities=23%  Similarity=0.395  Sum_probs=31.0

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEc
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVR   38 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r   38 (248)
                      ++++|+|+|-| -|-+|+++++.|.+.|++|+.++.
T Consensus        28 ~l~g~~v~IqG-fGnVG~~~a~~L~~~Gakvv~vsD   62 (242)
T d1v9la1          28 GIEGKTVAIQG-MGNVGRWTAYWLEKMGAKVIAVSD   62 (242)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEEC
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEeec
Confidence            47899999996 788999999999999999987764

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=91.48  E-value=0.079  Score=39.65  Aligned_cols=75  Identities=9%  Similarity=-0.147  Sum_probs=48.8

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEE
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFH   83 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~   83 (248)
                      .++++||=.|++.|.   ++..|+++|.+|++++.+..-.. ...+.......++.++.+|+.+.+    .-+..|+|+.
T Consensus        36 ~~~~~vLDiGCG~G~---~~~~l~~~g~~v~GvD~S~~ml~-~A~~~~~~~~~~v~~~~~d~~~~~----~~~~fD~i~~  107 (246)
T d1y8ca_          36 LVFDDYLDLACGTGN---LTENLCPKFKNTWAVDLSQEMLS-EAENKFRSQGLKPRLACQDISNLN----INRKFDLITC  107 (246)
T ss_dssp             CCTTEEEEETCTTST---THHHHGGGSSEEEEECSCHHHHH-HHHHHHHHTTCCCEEECCCGGGCC----CSCCEEEEEE
T ss_pred             CCCCeEEEEeCcCCH---HHHHHHHhCCccEeeccchhhhh-hccccccccCccceeeccchhhhc----ccccccccce
Confidence            346899999966553   56677788999999988764211 111222233457899999997643    2246798886


Q ss_pred             ccc
Q 025755           84 VAC   86 (248)
Q Consensus        84 ~ag   86 (248)
                      ..+
T Consensus       108 ~~~  110 (246)
T d1y8ca_         108 CLD  110 (246)
T ss_dssp             CTT
T ss_pred             eee
Confidence            543

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=91.41  E-value=0.18  Score=37.32  Aligned_cols=36  Identities=33%  Similarity=0.383  Sum_probs=31.1

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCC
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPC   41 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~   41 (248)
                      ..|+|+|.|| |..|...|..|.++|++|+++.++..
T Consensus        48 ~~k~VvIIGa-GpAGl~aA~~l~~~G~~v~l~E~~~~   83 (233)
T d1djqa3          48 NKDSVLIVGA-GPSGSEAARVLMESGYTVHLTDTAEK   83 (233)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCceEEEEcc-cHHHHHHHHHHHHhccceeeEeeccc
Confidence            4688999875 67899999999999999999987664

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=91.40  E-value=0.1  Score=34.64  Aligned_cols=34  Identities=29%  Similarity=0.389  Sum_probs=29.0

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCC
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPC   41 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~   41 (248)
                      ++++|.| +|++|.++|..|.+.|++|+++.|++.
T Consensus        33 ~~vvIiG-gG~iG~E~A~~l~~~g~~Vtlv~~~~~   66 (122)
T d1xhca2          33 GEAIIIG-GGFIGLELAGNLAEAGYHVKLIHRGAM   66 (122)
T ss_dssp             SEEEEEE-CSHHHHHHHHHHHHTTCEEEEECSSSC
T ss_pred             CcEEEEC-CcHHHHHHHHHhhcccceEEEEecccc
Confidence            5676665 589999999999999999999988763

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=91.21  E-value=0.52  Score=31.37  Aligned_cols=78  Identities=18%  Similarity=0.189  Sum_probs=50.1

Q ss_pred             CCCC-CCcEEEEEcCcc----------HHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHH
Q 025755            1 MSGE-DKERVCVTGAGG----------YIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYE   69 (248)
Q Consensus         1 m~~l-~~k~vlVtG~~g----------~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~   69 (248)
                      |+.- ..|+|+|.|++.          .-+...++.|.+.|++++++.-++....  .-.   .-.+++.+...   ..+
T Consensus         1 mp~~~~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~TVs--td~---d~aD~lYfePl---t~e   72 (127)
T d1a9xa3           1 MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIM--TDP---EMADATYIEPI---HWE   72 (127)
T ss_dssp             CCCCSSCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCGG--GCG---GGSSEEECSCC---CHH
T ss_pred             CCCCCCCCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHhhh--cCh---hhcceeeeecC---CHH
Confidence            5543 458999999854          5678899999999999999887764211  101   11234444333   346


Q ss_pred             HHHHHhC--CCCEEEEccc
Q 025755           70 ALCAATA--GCTGVFHVAC   86 (248)
Q Consensus        70 ~~~~~~~--~id~vi~~ag   86 (248)
                      .+.+.++  ++|.|+-..|
T Consensus        73 ~v~~Ii~~E~pd~il~~~G   91 (127)
T d1a9xa3          73 VVRKIIEKERPDAVLPTMG   91 (127)
T ss_dssp             HHHHHHHHHCCSEEECSSS
T ss_pred             HHHHHHHHhCcCCeEEEee
Confidence            6666654  7898875554

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=91.20  E-value=0.11  Score=37.41  Aligned_cols=32  Identities=25%  Similarity=0.202  Sum_probs=26.6

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCC
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDP   40 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~   40 (248)
                      |+|.|.| .|.+|..++..| ++|++|++++.+.
T Consensus         1 MkI~ViG-lG~vGl~~a~~~-a~g~~V~g~Din~   32 (196)
T d1dlja2           1 MKIAVAG-SGYVGLSLGVLL-SLQNEVTIVDILP   32 (196)
T ss_dssp             CEEEEEC-CSHHHHHHHHHH-TTTSEEEEECSCH
T ss_pred             CEEEEEC-CChhHHHHHHHH-HCCCcEEEEECCH
Confidence            4688885 899999999755 5799999998775

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=91.12  E-value=0.14  Score=33.65  Aligned_cols=34  Identities=24%  Similarity=0.225  Sum_probs=27.4

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHH---CCCeEEEEEcCC
Q 025755            6 KERVCVTGAGGYIASWLVKYLLL---KGYMVHGTVRDP   40 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~---~g~~V~~~~r~~   40 (248)
                      .++++|.|| |.+|.+++..|.+   +|.+|+++.|..
T Consensus        20 p~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~~   56 (117)
T d1aoga2          20 PRRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRGE   56 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESSS
T ss_pred             CCeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEeccc
Confidence            478999988 9999999976654   456899998865

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=91.08  E-value=0.14  Score=38.76  Aligned_cols=35  Identities=20%  Similarity=-0.009  Sum_probs=31.0

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEc
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVR   38 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r   38 (248)
                      ++++|+++|-| .|-+|+++++.|.+.|++|+.+.-
T Consensus        33 ~l~g~~v~IQG-fGnVG~~~a~~L~e~GakvvavsD   67 (255)
T d1bgva1          33 TLVGKTVALAG-FGNVAWGAAKKLAELGAKAVTLSG   67 (255)
T ss_dssp             CSTTCEEEECC-SSHHHHHHHHHHHHHTCEEEEEEE
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEec
Confidence            47899999998 688999999999999999987753

>d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=90.91  E-value=0.096  Score=37.23  Aligned_cols=75  Identities=13%  Similarity=0.067  Sum_probs=43.2

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCC-CeEEEEE-cCCCchhhHHhhhhcCCCCCeEEEEccC-----------CCHHHHHH
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKG-YMVHGTV-RDPCDEKNAHLKKLEGASENLQLFKTDL-----------LDYEALCA   73 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g-~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~Di-----------~d~~~~~~   73 (248)
                      .+|.|-| .|.||+.+.+.++++. .+|+.+. .++. .....+...     +...+..+-           .....+..
T Consensus         3 irIaING-fGRIGR~v~Ral~~~~dieiVaINd~~~~-~~~~~l~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (172)
T d2czca2           3 VKVGVNG-YGTIGKRVAYAVTKQDDMELIGITKTKPD-FEAYRAKEL-----GIPVYAASEEFIPRFEKEGFEVAGTLND   75 (172)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHTCTTEEEEEEEESSCS-HHHHHHHHT-----TCCEEESSGGGHHHHHHHTCCCSCBHHH
T ss_pred             EEEEEEC-CCHHHHHHHHHHHhCCCceEEEEecCCCh-HHHHHhhhc-----CceeecccccceeeecccCccccchhhh
Confidence            6899998 5999999999998764 5666554 3332 221111111     111122111           11123444


Q ss_pred             HhCCCCEEEEccccC
Q 025755           74 ATAGCTGVFHVACPV   88 (248)
Q Consensus        74 ~~~~id~vi~~ag~~   88 (248)
                      +.+++|+||-|.|..
T Consensus        76 ~~~~vDvViEcTG~f   90 (172)
T d2czca2          76 LLEKVDIIVDATPGG   90 (172)
T ss_dssp             HHTTCSEEEECCSTT
T ss_pred             hhccCCEEEECCCCC
Confidence            556899999999864

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=90.82  E-value=0.17  Score=35.49  Aligned_cols=35  Identities=14%  Similarity=0.125  Sum_probs=28.1

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCC
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDP   40 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~   40 (248)
                      ++++|+|.| +|.+|.+++..|.+.|.+|.++.+..
T Consensus         2 ~~~~VvIIG-gG~~G~e~A~~l~~~g~~v~v~~~~~   36 (185)
T d1q1ra1           2 ANDNVVIVG-TGLAGVEVAFGLRASGWEGNIRLVGD   36 (185)
T ss_dssp             CSCEEEEEC-CSHHHHHHHHHHHHTTCCSEEEEECS
T ss_pred             CCCCEEEEC-CcHHHHHHHHHHHHcCCceEEEEecC
Confidence            457777776 57899999999999999887776654

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=90.80  E-value=0.096  Score=39.99  Aligned_cols=32  Identities=25%  Similarity=0.156  Sum_probs=29.1

Q ss_pred             EEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCC
Q 025755            8 RVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDP   40 (248)
Q Consensus         8 ~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~   40 (248)
                      +|+|.||+ -.|..++..|.++|++|+++.+++
T Consensus         4 ~V~IvGaG-p~Gl~~A~~L~~~G~~v~vlE~~~   35 (292)
T d1k0ia1           4 QVAIIGAG-PSGLLLGQLLHKAGIDNVILERQT   35 (292)
T ss_dssp             SEEEECCS-HHHHHHHHHHHHHTCCEEEECSSC
T ss_pred             CEEEECcC-HHHHHHHHHHHHCCCCEEEEeCCC
Confidence            68899876 899999999999999999998865

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=90.78  E-value=0.21  Score=35.36  Aligned_cols=75  Identities=19%  Similarity=0.235  Sum_probs=45.3

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcC-------------CCCCeEEEEccCCCHHHH
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEG-------------ASENLQLFKTDLLDYEAL   71 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~-------------~~~~~~~~~~Di~d~~~~   71 (248)
                      .+++||..|++.|   ..+..|+++|++|++++.+.... ....+....             ......++.+|..+....
T Consensus        20 ~~~rvLd~GCG~G---~~a~~la~~G~~V~gvD~S~~~i-~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~   95 (201)
T d1pjza_          20 PGARVLVPLCGKS---QDMSWLSGQGYHVVGAELSEAAV-ERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTAR   95 (201)
T ss_dssp             TTCEEEETTTCCS---HHHHHHHHHCCEEEEEEECHHHH-HHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHH
T ss_pred             CCCEEEEecCcCC---HHHHHHHHcCCceEeecccHHHH-HHHHHHhccccchhhhhhhhhccccccceecccccccccc
Confidence            5789999996655   35567788899999999887422 111111111             123457888888765432


Q ss_pred             HHHhCCCCEEEEcc
Q 025755           72 CAATAGCTGVFHVA   85 (248)
Q Consensus        72 ~~~~~~id~vi~~a   85 (248)
                      .  ....|.|+...
T Consensus        96 ~--~~~~D~i~~~~  107 (201)
T d1pjza_          96 D--IGHCAAFYDRA  107 (201)
T ss_dssp             H--HHSEEEEEEES
T ss_pred             c--ccceeEEEEEe
Confidence            2  12456665433

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=90.75  E-value=0.13  Score=37.61  Aligned_cols=32  Identities=25%  Similarity=0.220  Sum_probs=27.8

Q ss_pred             EEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCC
Q 025755            9 VCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPC   41 (248)
Q Consensus         9 vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~   41 (248)
                      |+|.| +|.-|...|..|+++|++|.++.++..
T Consensus         8 viViG-aG~~Gl~~A~~La~~G~~V~vlE~~~~   39 (297)
T d2bcgg1           8 VIVLG-TGITECILSGLLSVDGKKVLHIDKQDH   39 (297)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCCEEEEcCCCC
Confidence            56666 789999999999999999999988753

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=90.45  E-value=0.2  Score=30.40  Aligned_cols=35  Identities=26%  Similarity=0.230  Sum_probs=30.2

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCC
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPC   41 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~   41 (248)
                      +|+|.|.|+ |-+|+-++..-.+.|++|++++-+..
T Consensus         1 ~k~vgIlG~-GQLgrMl~~Aa~~LG~~v~vldp~~~   35 (78)
T d3etja2           1 MKQVCVLGN-GQLGRMLRQAGEPLGIAVWPVGLDAE   35 (78)
T ss_dssp             CEEEEEEBC-SHHHHHHHHHHGGGTEEEEEECTTSC
T ss_pred             CCEEEEEcC-CHHHHHHHHHHHHcCCEEEEEcCCCC
Confidence            478999976 56999999999999999999987664

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=90.24  E-value=0.15  Score=33.36  Aligned_cols=35  Identities=23%  Similarity=0.138  Sum_probs=29.6

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCC
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPC   41 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~   41 (248)
                      .++++|. |+|++|.++|..|.+.|++|+++.+...
T Consensus        21 p~~vvIi-GgG~~G~E~A~~l~~~g~~Vtlve~~~~   55 (115)
T d1lvla2          21 PQHLVVV-GGGYIGLELGIAYRKLGAQVSVVEARER   55 (115)
T ss_dssp             CSEEEEE-CCSHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CCeEEEE-CCCHHHHHHHHHHhhcccceEEEeeecc
Confidence            4677777 5689999999999999999999988653

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=90.02  E-value=0.17  Score=38.84  Aligned_cols=36  Identities=19%  Similarity=0.099  Sum_probs=30.7

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCC
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPC   41 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~   41 (248)
                      +.|+|+|+|| |-.|...|..|.++|++|+++.++..
T Consensus        29 ~pkkV~IIGa-G~aGLsaA~~L~~~G~~V~vlE~~~~   64 (370)
T d2iida1          29 NPKHVVIVGA-GMAGLSAAYVLAGAGHQVTVLEASER   64 (370)
T ss_dssp             SCCEEEEECC-BHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            4579999986 57899999999999999999987653

>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Dethiobiotin synthetase
species: Escherichia coli [TaxId: 562]

Probab=89.95  E-value=0.088  Score=38.28  Aligned_cols=31  Identities=26%  Similarity=0.310  Sum_probs=26.7

Q ss_pred             cEEEEEcCccHHHHH-----HHHHHHHCCCeEEEEE
Q 025755            7 ERVCVTGAGGYIASW-----LVKYLLLKGYMVHGTV   37 (248)
Q Consensus         7 k~vlVtG~~g~iG~~-----~~~~l~~~g~~V~~~~   37 (248)
                      |+++|||.+.|+|+.     ++..|.++|++|.+++
T Consensus         2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~G~rVl~id   37 (224)
T d1byia_           2 KRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYK   37 (224)
T ss_dssp             EEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred             ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEC
Confidence            799999998889985     6677889999999986

>d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Diaminopimelic acid dehydrogenase (DAPDH)
species: Corynebacterium glutamicum [TaxId: 1718]

Probab=89.80  E-value=0.19  Score=35.42  Aligned_cols=33  Identities=18%  Similarity=0.245  Sum_probs=24.8

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHC-CCeEEEEEc
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLK-GYMVHGTVR   38 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~-g~~V~~~~r   38 (248)
                      +..+|.|.| .|.+|+..++.+.+. +.+++.+..
T Consensus         2 ~kirvgiiG-~G~ig~~~~~~l~~~~~~elvav~~   35 (170)
T d1f06a1           2 TNIRVAIVG-YGNLGRSVEKLIAKQPDMDLVGIFS   35 (170)
T ss_dssp             CCEEEEEEC-CSHHHHHHHHHHTTCSSEEEEEEEE
T ss_pred             CcceEEEEC-ChHHHHHHHHHHHhCCCcEEEEEEe
Confidence            345789998 589999999998775 577775543

>d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium pasteurianum [TaxId: 1501]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Nitrogenase iron protein
species: Clostridium pasteurianum [TaxId: 1501]

Probab=89.66  E-value=0.11  Score=39.33  Aligned_cols=35  Identities=23%  Similarity=0.151  Sum_probs=29.2

Q ss_pred             CcEEEEEcCccHHHHHH-----HHHHHHCCCeEEEEEcCCC
Q 025755            6 KERVCVTGAGGYIASWL-----VKYLLLKGYMVHGTVRDPC   41 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~-----~~~l~~~g~~V~~~~r~~~   41 (248)
                      ||+|.|+| =||+|+..     +..|++.|++|.+++.+.+
T Consensus         1 mr~Iai~g-KGGvGKTT~a~nLA~~LA~~G~rVllID~D~q   40 (269)
T d1cp2a_           1 MRQVAIYG-KGGIGKSTTTQNLTSGLHAMGKTIMVVGCDPK   40 (269)
T ss_dssp             CEEEEEEE-CTTSSHHHHHHHHHHHHHTTTCCEEEEEECTT
T ss_pred             CCEEEEEC-CCcCCHHHHHHHHHHHHHhCCCcEEEEecCCC
Confidence            68999998 88888754     5588899999999999864

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=89.64  E-value=0.27  Score=36.52  Aligned_cols=37  Identities=27%  Similarity=0.153  Sum_probs=31.9

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCC
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDP   40 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~   40 (248)
                      +|++|+|+|-| -|-+|+++++.|.+.|++|++.+.+.
T Consensus        36 ~l~g~~v~IqG-~GnVG~~~a~~L~~~Gakvv~~d~~~   72 (230)
T d1leha1          36 SLEGLAVSVQG-LGNVAKALCKKLNTEGAKLVVTDVNK   72 (230)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEeecccH
Confidence            47899999886 56699999999999999999887664

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=89.48  E-value=0.23  Score=32.83  Aligned_cols=34  Identities=26%  Similarity=0.250  Sum_probs=28.8

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCC
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDP   40 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~   40 (248)
                      .++++|.| +|.||.++|..|.+.|.+|+++.|+.
T Consensus        20 P~~vvIIG-gG~iG~E~A~~l~~lG~~Vtii~~~~   53 (122)
T d1h6va2          20 PGKTLVVG-ASYVALECAGFLAGIGLDVTVMVRSI   53 (122)
T ss_dssp             CCSEEEEC-CSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred             CCeEEEEC-CCccHHHHHHHHhhcCCeEEEEEech
Confidence            36777776 57899999999999999999998763

>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 1, PRMT1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=89.33  E-value=0.67  Score=35.88  Aligned_cols=74  Identities=15%  Similarity=0.141  Sum_probs=46.3

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCC-eEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEE
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGY-MVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFH   83 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~   83 (248)
                      ++|+||-.|++.|+   ++..+++.|+ +|++++.+................+++.++.+|+.+.+.   -.+.+|+|+.
T Consensus        33 ~~~~VLDiGcG~G~---ls~~aa~~Ga~~V~avd~s~~~~~a~~~~~~n~~~~~v~~~~~~~~~~~~---~~~~~D~ivs  106 (316)
T d1oria_          33 KDKVVLDVGSGTGI---LCMFAAKAGARKVIGIECSSISDYAVKIVKANKLDHVVTIIKGKVEEVEL---PVEKVDIIIS  106 (316)
T ss_dssp             TTCEEEEETCTTSH---HHHHHHHTTCSEEEEEECSTTHHHHHHHHHHTTCTTTEEEEESCTTTCCC---SSSCEEEEEE
T ss_pred             CcCEEEEEecCCcH---HHHHHHHhCCCEEEEEcCcHHHhhhhhHHHHhCCccccceEeccHHHccc---ccceeEEEee
Confidence            68999999966653   3445666785 799998765321111122223345679999999977431   1246788876


Q ss_pred             c
Q 025755           84 V   84 (248)
Q Consensus        84 ~   84 (248)
                      .
T Consensus       107 ~  107 (316)
T d1oria_         107 E  107 (316)
T ss_dssp             C
T ss_pred             e
Confidence            4

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.30  E-value=0.3  Score=37.30  Aligned_cols=35  Identities=17%  Similarity=0.076  Sum_probs=29.3

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCC
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDP   40 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~   40 (248)
                      +.++|+|+|| |.-|...|.+|.++|++|+++-.+.
T Consensus         4 ~~~kViVIGa-G~aGL~aA~~L~~~G~~V~VlEa~~   38 (449)
T d2dw4a2           4 KTGKVIIIGS-GVSGLAAARQLQSFGMDVTLLEARD   38 (449)
T ss_dssp             CCCEEEEECC-BHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            4567888865 7799999999999999999997654

>d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=89.27  E-value=0.14  Score=37.56  Aligned_cols=36  Identities=19%  Similarity=-0.017  Sum_probs=30.5

Q ss_pred             CcEEEEEcCccHHHH-----HHHHHHHHCCCeEEEEEcCCC
Q 025755            6 KERVCVTGAGGYIAS-----WLVKYLLLKGYMVHGTVRDPC   41 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~-----~~~~~l~~~g~~V~~~~r~~~   41 (248)
                      ||+|.|+++-||+|+     +++..|+++|.+|.+++.+..
T Consensus         1 ~kvIav~s~KGGvGKTtia~nlA~~la~~g~~VlliD~D~~   41 (232)
T d1hyqa_           1 VRTITVASGKGGTGKTTITANLGVALAQLGHDVTIVDADIT   41 (232)
T ss_dssp             CEEEEEEESSSCSCHHHHHHHHHHHHHHTTCCEEEEECCCS
T ss_pred             CEEEEEECCCCCChHHHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence            589999999999887     456778889999999988764

>d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=89.25  E-value=1.1  Score=33.20  Aligned_cols=35  Identities=17%  Similarity=0.243  Sum_probs=28.9

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHC-CCeEEEEEc
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLK-GYMVHGTVR   38 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~-g~~V~~~~r   38 (248)
                      ++++|+|+|-|- |-+|+++++.|+++ |.+|+.+.-
T Consensus        29 ~l~g~~v~IqGf-GnVG~~~a~~L~~~~G~kvv~vsD   64 (239)
T d1gtma1          29 TLKGKTIAIQGY-GNAGYYLAKIMSEDFGMKVVAVSD   64 (239)
T ss_dssp             CSTTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHhcCcceeeccc
Confidence            478999999887 66999999999864 899887654

>d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein PH1915, middle and C-terminal domains
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=89.22  E-value=2.4  Score=32.73  Aligned_cols=112  Identities=14%  Similarity=0.047  Sum_probs=59.3

Q ss_pred             CCcEEEEEc-CccHHHHHHHHHHHHCCC-eEEEEEcCCCchhhHHhhhh--cCCCCCeEEEEccCCCHH-HHHHHhCCCC
Q 025755            5 DKERVCVTG-AGGYIASWLVKYLLLKGY-MVHGTVRDPCDEKNAHLKKL--EGASENLQLFKTDLLDYE-ALCAATAGCT   79 (248)
Q Consensus         5 ~~k~vlVtG-~~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~~~Di~d~~-~~~~~~~~id   79 (248)
                      .+++||=.+ ++|+.+.+++    ..|. +|+.++.++.. .....++.  .+-.+++.++.+|+.+.- .+.+.-+..|
T Consensus       145 ~g~~VLDl~~g~G~~si~~a----~~ga~~V~~vD~s~~a-l~~a~~N~~~ngl~~~~~~~~~d~~~~~~~~~~~~~~fD  219 (324)
T d2as0a2         145 PGDRVLDVFTYTGGFAIHAA----IAGADEVIGIDKSPRA-IETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFD  219 (324)
T ss_dssp             TTCEEEETTCTTTHHHHHHH----HTTCSEEEEEESCHHH-HHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCEE
T ss_pred             CCCeeecccCcccchhhhhh----hcCCcEEEeecCCHHH-HHHHHHHHHHcCCCccceeeechhhhhhHHHHhccCCCC
Confidence            367777766 5666666544    4565 79999988742 22222222  222357889999987532 1222224679


Q ss_pred             EEEEccccCCCCCCCCccccchhhhHHHHHHHHHHHHhc-C-CCEEEEEe
Q 025755           80 GVFHVACPVPVGKVPNPEVQLIDPAVVGTKNVLNSCVKA-K-VKRVVVVS  127 (248)
Q Consensus        80 ~vi~~ag~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~-~-~~~iV~vS  127 (248)
                      .||...-....    .  ......-...-..+++.+.+. + .|.+|+.|
T Consensus       220 ~Vi~DpP~~~~----~--~~~~~~~~~~y~~l~~~a~~ll~pGG~lv~~s  263 (324)
T d2as0a2         220 IVVLDPPAFVQ----H--EKDLKAGLRAYFNVNFAGLNLVKDGGILVTCS  263 (324)
T ss_dssp             EEEECCCCSCS----S--GGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred             chhcCCccccC----C--HHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEe
Confidence            99976422111    1  112222233345566666554 2 24555554

>d2blna2 c.65.1.1 (A:1-203) Polymyxin resistance protein ArnA, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: Polymyxin resistance protein ArnA, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=89.10  E-value=0.58  Score=33.84  Aligned_cols=78  Identities=9%  Similarity=0.115  Sum_probs=42.9

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhh----HHhhhhcCCCCCeEEEE-ccCCCHHHHHHHhC-CCCE
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKN----AHLKKLEGASENLQLFK-TDLLDYEALCAATA-GCTG   80 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~----~~~~~~~~~~~~~~~~~-~Di~d~~~~~~~~~-~id~   80 (248)
                      |+|++.|. +..|..+.+.|++.|++|.++...+++...    ..+..... ..++.++. -++.+++.++.+.+ ++|+
T Consensus         1 Mkiv~~~~-~~~g~~~l~~L~~~g~~I~~Vvt~~~~~~~~~~~~~~~~~a~-~~~i~~~~~~~~~~~~~~~~i~~~~~Dl   78 (203)
T d2blna2           1 MKTVVFAY-HDMGCLGIEALLAAGYEISAIFTHTDNPGEKAFYGSVARLAA-ERGIPVYAPDNVNHPLWVERIAQLSPDV   78 (203)
T ss_dssp             CEEEEEEC-HHHHHHHHHHHHHTTCEEEEEECCCC------CCCCHHHHHH-HHTCCEECCSCCCSHHHHHHHHHTCCSE
T ss_pred             CeEEEEec-CHHHHHHHHHHHHCCCCEEEEEcCCCCCCcccccCHHHHHHH-HcCCcceecccccchhhhhhhhhhcccc
Confidence            36777754 558999999999999998765532221100    00111111 12344444 45666554444332 6898


Q ss_pred             EEEccc
Q 025755           81 VFHVAC   86 (248)
Q Consensus        81 vi~~ag   86 (248)
                      +|....
T Consensus        79 ii~~g~   84 (203)
T d2blna2          79 IFSFYY   84 (203)
T ss_dssp             EEEESC
T ss_pred             eeeeec
Confidence            877654

>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Arsenite-translocating ATPase ArsA
species: Escherichia coli [TaxId: 562]

Probab=89.02  E-value=0.17  Score=38.33  Aligned_cols=37  Identities=22%  Similarity=0.218  Sum_probs=32.2

Q ss_pred             CCcEEEEEcCccHHHHHH-----HHHHHHCCCeEEEEEcCCC
Q 025755            5 DKERVCVTGAGGYIASWL-----VKYLLLKGYMVHGTVRDPC   41 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~-----~~~l~~~g~~V~~~~r~~~   41 (248)
                      .+++|+|+.|=||+|+..     +..|+++|++|.+++.+..
T Consensus        18 ~~~~iii~sGKGGVGKTT~a~nLA~~lA~~G~rVllvD~Dp~   59 (279)
T d1ihua2          18 NEHGLIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSDPA   59 (279)
T ss_dssp             TSCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESCCC
T ss_pred             CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            467888998899999976     6888899999999999874

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=88.95  E-value=0.056  Score=37.38  Aligned_cols=28  Identities=11%  Similarity=-0.011  Sum_probs=18.7

Q ss_pred             CccHHHHHHHHHHHHCCCeEEEEEcCCC
Q 025755           14 AGGYIASWLVKYLLLKGYMVHGTVRDPC   41 (248)
Q Consensus        14 ~~g~iG~~~~~~l~~~g~~V~~~~r~~~   41 (248)
                      |+|-+|+++++.|.+.++.+.+++|+.+
T Consensus         6 G~G~mg~~l~~~L~~~~~~~~v~~R~~~   33 (153)
T d2i76a2           6 GTGTLTRFFLECLKDRYEIGYILSRSID   33 (153)
T ss_dssp             SCCHHHHHHHHTTC----CCCEECSSHH
T ss_pred             eCcHHHHHHHHHHHhCCCEEEEEeCChh
Confidence            6788999999987654444457888764

>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=88.81  E-value=0.2  Score=36.72  Aligned_cols=36  Identities=17%  Similarity=0.006  Sum_probs=30.0

Q ss_pred             CCcEEEEEcCccHHHHH-----HHHHHHHCCCeEEEEEcCC
Q 025755            5 DKERVCVTGAGGYIASW-----LVKYLLLKGYMVHGTVRDP   40 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~-----~~~~l~~~g~~V~~~~r~~   40 (248)
                      ++|+|.|+|+-||+|+.     ++..|++.|.+|.+++-+.
T Consensus         1 m~~vIav~~~kGGvGKTtia~nLA~~la~~g~~VlliD~D~   41 (237)
T d1g3qa_           1 MGRIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGDL   41 (237)
T ss_dssp             CCEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred             CCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            35789999999999985     5677778999999999764

>d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Apoptosis-inducing factor (AIF)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.70  E-value=0.3  Score=32.96  Aligned_cols=34  Identities=21%  Similarity=0.215  Sum_probs=27.6

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHH----CCCeEEEEEcCC
Q 025755            6 KERVCVTGAGGYIASWLVKYLLL----KGYMVHGTVRDP   40 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~----~g~~V~~~~r~~   40 (248)
                      .|+++|.|| |++|-+++..|.+    .|.+|+++.++.
T Consensus        37 ~k~i~IvGg-G~~G~E~A~~l~~~~~~~g~~Vt~i~~~~   74 (137)
T d1m6ia2          37 VKSITIIGG-GFLGSELACALGRKARALGTEVIQLFPEK   74 (137)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHHHHhcCCEEEEecccc
Confidence            478888865 8999999998863    589999988765

>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=88.53  E-value=0.21  Score=38.57  Aligned_cols=35  Identities=11%  Similarity=-0.023  Sum_probs=29.3

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCC
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPC   41 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~   41 (248)
                      |..|+|.| +|.-|..+|+.|++.|++|.++.++..
T Consensus         1 M~dv~IIG-aG~sGl~~A~~L~~~g~~V~iiEk~~~   35 (298)
T d1i8ta1           1 MYDYIIVG-SGLFGAVCANELKKLNKKVLVIEKRNH   35 (298)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHGGGTCCEEEECSSSS
T ss_pred             CccEEEEC-CcHHHHHHHHHHHhCCCcEEEEECCCC
Confidence            34677776 578999999999999999999987664

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=88.45  E-value=1.3  Score=32.73  Aligned_cols=35  Identities=20%  Similarity=0.212  Sum_probs=29.1

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHH-CCCeEEEEEc
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLL-KGYMVHGTVR   38 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~-~g~~V~~~~r   38 (248)
                      ++++++++|-| .|-+|+++++.|.+ .|.+|+.++-
T Consensus        28 ~l~g~~vaIqG-~GnVG~~~a~~L~~e~Ga~vv~vsd   63 (234)
T d1b26a1          28 DPKKATVAVQG-FGNVGQFAALLISQELGSKVVAVSD   63 (234)
T ss_dssp             CTTTCEEEEEC-CSHHHHHHHHHHHHHHCCEEEEEEE
T ss_pred             CcCCCEEEEEC-CCHHHHHHHHHHHHhcCCceEEeec
Confidence            47889988875 88899999999975 5999987763

>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=88.38  E-value=1.7  Score=28.48  Aligned_cols=74  Identities=20%  Similarity=0.164  Sum_probs=47.0

Q ss_pred             CCcEEEEEcCcc----------HHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHH
Q 025755            5 DKERVCVTGAGG----------YIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAA   74 (248)
Q Consensus         5 ~~k~vlVtG~~g----------~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~   74 (248)
                      ..|+|+|.|++.          .-+...++.|.+.|++++++.-++....  .   -..-.+++.+...   ..+.+...
T Consensus         3 ~~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~~~IliN~NPeTVs--t---d~d~aD~lYfepl---t~e~v~~I   74 (121)
T d1a9xa4           3 DREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVS--T---DYDTSDRLYFEPV---TLEDVLEI   74 (121)
T ss_dssp             SSCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECCCTTSST--T---STTSSSEEECCCC---SHHHHHHH
T ss_pred             CCCEEEEECCCcCcccccchhhHHHHHHHHHHHhcCCeEEEEecChhhhh--c---ChhhcCceEEccC---CHHHHHHH
Confidence            468999999854          5678899999999999999887764211  0   0011233433333   34556655


Q ss_pred             hC--CCCEEEEccc
Q 025755           75 TA--GCTGVFHVAC   86 (248)
Q Consensus        75 ~~--~id~vi~~ag   86 (248)
                      ++  ++|.|+-..|
T Consensus        75 i~~E~p~~ii~~~G   88 (121)
T d1a9xa4          75 VRIEKPKGVIVQYG   88 (121)
T ss_dssp             HHHHCCSEEECSSS
T ss_pred             HHHhCCCEEEeehh
Confidence            43  6888765544

>d1d7ya1 c.3.1.5 (A:5-115,A:237-308) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=87.75  E-value=0.16  Score=35.84  Aligned_cols=31  Identities=32%  Similarity=0.260  Sum_probs=25.3

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCCCeEEEEEc
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKGYMVHGTVR   38 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r   38 (248)
                      .+|+|.| +|.+|.+++..|.+.|.+|.++.+
T Consensus         4 a~VvIIG-gG~~G~e~A~~l~~~g~~v~i~~~   34 (183)
T d1d7ya1           4 APVVVLG-AGLASVSFVAELRQAGYQGLITVV   34 (183)
T ss_dssp             SSEEEEC-CSHHHHHHHHHHHHHTCCSCEEEE
T ss_pred             CCEEEEC-ccHHHHHHHHHHHhcCCceEEEEE
Confidence            4678887 789999999999999987666554

>d1p3y1_ c.34.1.1 (1:) MrsD {Bacillus sp. hil-y85/54728 [TaxId: 69002]}

class: Alpha and beta proteins (a/b)
fold: Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
superfamily: Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
family: Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
domain: MrsD
species: Bacillus sp. hil-y85/54728 [TaxId: 69002]

Probab=87.30  E-value=0.14  Score=36.79  Aligned_cols=37  Identities=16%  Similarity=0.083  Sum_probs=25.2

Q ss_pred             CCCCCCcEEEEEcCccHHH----HHHHHHHHHCCCeEEEEEc
Q 025755            1 MSGEDKERVCVTGAGGYIA----SWLVKYLLLKGYMVHGTVR   38 (248)
Q Consensus         1 m~~l~~k~vlVtG~~g~iG----~~~~~~l~~~g~~V~~~~r   38 (248)
                      |+.|++|+|+ .|.||+|+    ..+++.|.+.|++|.++-.
T Consensus         1 ms~l~~KkIl-lgvTGsiaa~k~~~l~~~L~~~g~eV~vv~T   41 (183)
T d1p3y1_           1 ISILKDKKLL-IGICGSISSVGISSYLLYFKSFFKEIRVVMT   41 (183)
T ss_dssp             CTTGGGCEEE-EEECSCGGGGGTHHHHHHHTTTSSEEEEEEC
T ss_pred             CCCcCCCEEE-EEEeCHHHHHHHHHHHHHHHHCCCeEEEEEE
Confidence            6667888865 44445443    3677777788999887653

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=87.22  E-value=0.49  Score=34.92  Aligned_cols=73  Identities=16%  Similarity=0.108  Sum_probs=47.8

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEEc
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFHV   84 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~~   84 (248)
                      +.++||=.|++.|   ..+..|+++|++|++++.++. -.....+.....+.++.++.+|+.+..    .-+..|.|+..
T Consensus        41 ~~~~iLDiGcGtG---~~~~~l~~~~~~v~gvD~s~~-mi~~a~~~~~~~~~~i~~~~~d~~~l~----~~~~fD~I~~~  112 (251)
T d1wzna1          41 EVRRVLDLACGTG---IPTLELAERGYEVVGLDLHEE-MLRVARRKAKERNLKIEFLQGDVLEIA----FKNEFDAVTMF  112 (251)
T ss_dssp             CCCEEEEETCTTC---HHHHHHHHTTCEEEEEESCHH-HHHHHHHHHHHTTCCCEEEESCGGGCC----CCSCEEEEEEC
T ss_pred             CCCEEEEeCCCCC---ccchhhcccceEEEEEeeccc-cccccccccccccccchheehhhhhcc----cccccchHhhh
Confidence            4578999996654   445667889999999998863 222222233334557999999987643    12357887765


Q ss_pred             c
Q 025755           85 A   85 (248)
Q Consensus        85 a   85 (248)
                      -
T Consensus       113 ~  113 (251)
T d1wzna1         113 F  113 (251)
T ss_dssp             S
T ss_pred             h
Confidence            3

>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=87.17  E-value=0.55  Score=30.46  Aligned_cols=35  Identities=23%  Similarity=0.277  Sum_probs=27.7

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHH---CCCeEEEEEcCCC
Q 025755            6 KERVCVTGAGGYIASWLVKYLLL---KGYMVHGTVRDPC   41 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~---~g~~V~~~~r~~~   41 (248)
                      .|+++|.|| |.+|-+++..|.+   .|.+|+++.|+..
T Consensus        18 p~~v~IiGg-G~ig~E~A~~l~~~~~~g~~Vtli~~~~~   55 (117)
T d1feca2          18 PKRALCVGG-GYISIEFAGIFNAYKARGGQVDLAYRGDM   55 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHSCTTCEEEEEESSSS
T ss_pred             CCeEEEECC-ChHHHHHHHHhHhhcccccccceeccccc
Confidence            478888875 7899999987665   3889999998763

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.16  E-value=0.35  Score=35.59  Aligned_cols=78  Identities=15%  Similarity=0.171  Sum_probs=47.7

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhh------------------cCCCCCeEEEEccCC
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKL------------------EGASENLQLFKTDLL   66 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~------------------~~~~~~~~~~~~Di~   66 (248)
                      .+++||..|.+.|   ..+..|++.|++|++++.+... .....+..                  .....++.++.+|+.
T Consensus        45 ~~~rvLd~GCG~G---~~a~~LA~~G~~V~gvD~S~~a-i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~  120 (229)
T d2bzga1          45 SGLRVFFPLCGKA---VEMKWFADRGHSVVGVEISELG-IQEFFTEQNLSYSEEPITEIPGTKVFKSSSGNISLYCCSIF  120 (229)
T ss_dssp             CSCEEEETTCTTC---THHHHHHHTTCEEEEECSCHHH-HHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCGG
T ss_pred             CCCEEEEeCCCCc---HHHHHHHhCCCcEEEEeCCHHH-HHHHHHHhhccccccchhcccccceeeecCCcEEEEEcchh
Confidence            5679999996654   4466778899999999988632 21111111                  112356888999987


Q ss_pred             CHHHHHHHhCCCCEEEEccccC
Q 025755           67 DYEALCAATAGCTGVFHVACPV   88 (248)
Q Consensus        67 d~~~~~~~~~~id~vi~~ag~~   88 (248)
                      +...  ......|+|+..+...
T Consensus       121 ~l~~--~~~~~fd~i~~~~~l~  140 (229)
T d2bzga1         121 DLPR--TNIGKFDMIWDRGALV  140 (229)
T ss_dssp             GGGG--SCCCCEEEEEESSSTT
T ss_pred             hccc--cccCceeEEEEEEEEE
Confidence            5432  1112457776655443

>d1jyea_ c.93.1.1 (A:) Lac-repressor (lacR) core (C-terminal domain) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Periplasmic binding protein-like I
superfamily: Periplasmic binding protein-like I
family: L-arabinose binding protein-like
domain: Lac-repressor (lacR) core (C-terminal domain)
species: Escherichia coli [TaxId: 562]

Probab=86.74  E-value=2.5  Score=31.27  Aligned_cols=108  Identities=13%  Similarity=0.084  Sum_probs=61.9

Q ss_pred             cHHHHHHHHHHHHCCCeEEEEEcCCCc--hhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhC--CCCEEEEccccCCCC
Q 025755           16 GYIASWLVKYLLLKGYMVHGTVRDPCD--EKNAHLKKLEGASENLQLFKTDLLDYEALCAATA--GCTGVFHVACPVPVG   91 (248)
Q Consensus        16 g~iG~~~~~~l~~~g~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~--~id~vi~~ag~~~~~   91 (248)
                      .-+-..+-+.+-+.|++|++...+...  .....++.+...+-+--++..+..+.+.+...+.  ++=+|+...  ... 
T Consensus        16 ~~i~~~i~~~a~~~Gy~v~v~~~~~~~~~~~~~~l~~l~~~~vdgiIl~~~~~~~~~~~~~~~~~~iPvV~~d~--~~~-   92 (271)
T d1jyea_          16 SQIVAAILSRADQLGASVVVSMVERSGVEACKTAVHNLLAQRVSGLIINYPLDDQDAIAVEAACTNVPALFLDV--SDQ-   92 (271)
T ss_dssp             HHHHHHHHHHHHHTTCEEEEEECCSSSHHHHHHHHHHHHTTTCSCEEEESCCCHHHHHHHHHHTTTSCEEESSS--CTT-
T ss_pred             HHHHHHHHHHHHHcCCEEEEEECCCCCHHHHHHHHHHHHhcCCCEEEeccccCchhHHHHHHHhcCCCeeeeec--ccc-
Confidence            346677788888899999887644322  2334445444443333344455544444333232  344554432  111 


Q ss_pred             CCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEecc
Q 025755           92 KVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSSI  129 (248)
Q Consensus        92 ~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS~  129 (248)
                         .....+.-.|..+...+++.+.+.|.++|.++++.
T Consensus        93 ---~~~~~V~~D~~~~~~~~~~~L~~~G~~~i~~i~~~  127 (271)
T d1jyea_          93 ---TPINSIIFSHEDGTRLGVEHLVALGHQQIALLAGP  127 (271)
T ss_dssp             ---SSSCEEEECHHHHHHHHHHHHHHHTCCSEEEEECC
T ss_pred             ---ccCCccccchhhccccceeeeeccccccccccccc
Confidence               11223344577788888999988888999999753

>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein Ta1320
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=86.24  E-value=0.41  Score=34.56  Aligned_cols=67  Identities=16%  Similarity=0.150  Sum_probs=43.2

Q ss_pred             CCCCcEEEEEcCc-cHHHHHHHHHHHHCCC-eEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCE
Q 025755            3 GEDKERVCVTGAG-GYIASWLVKYLLLKGY-MVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTG   80 (248)
Q Consensus         3 ~l~~k~vlVtG~~-g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~   80 (248)
                      ++.||+||=.|++ |.++.    .++..|. +|++++.+... .....+    ...++.++.+|+.+.      -.+.|+
T Consensus        46 dl~Gk~VLDlGcGtG~l~i----~a~~~ga~~V~~vDid~~a-~~~ar~----N~~~~~~~~~D~~~l------~~~fD~  110 (197)
T d1ne2a_          46 NIGGRSVIDAGTGNGILAC----GSYLLGAESVTAFDIDPDA-IETAKR----NCGGVNFMVADVSEI------SGKYDT  110 (197)
T ss_dssp             SSBTSEEEEETCTTCHHHH----HHHHTTBSEEEEEESCHHH-HHHHHH----HCTTSEEEECCGGGC------CCCEEE
T ss_pred             CCCCCEEEEeCCCCcHHHH----HHHHcCCCcccccccCHHH-HHHHHH----ccccccEEEEehhhc------CCcceE
Confidence            3679999999954 44443    3455675 69999887631 122112    235688999998643      246899


Q ss_pred             EEEc
Q 025755           81 VFHV   84 (248)
Q Consensus        81 vi~~   84 (248)
                      ||-|
T Consensus       111 Vi~N  114 (197)
T d1ne2a_         111 WIMN  114 (197)
T ss_dssp             EEEC
T ss_pred             EEeC
Confidence            9866

>d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=86.05  E-value=0.51  Score=33.60  Aligned_cols=33  Identities=18%  Similarity=-0.008  Sum_probs=26.6

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHC--CCeEEEEEcCC
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLK--GYMVHGTVRDP   40 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~--g~~V~~~~r~~   40 (248)
                      |||+|.||+ ++|..++..|.+.  +.+|+++.|+.
T Consensus         1 ~KVvIIGgG-~~G~e~A~~l~~~~~~~~V~v~~~~~   35 (198)
T d1nhpa1           1 MKVIVLGSS-HGGYEAVEELLNLHPDAEIQWYEKGD   35 (198)
T ss_dssp             CEEEEECSS-HHHHHHHHHHHHHCTTSEEEEEESSS
T ss_pred             CEEEEECCc-HHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence            478888775 9999999999886  46788888754

>d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Pyrococcus abyssi [TaxId: 29292]

Probab=85.74  E-value=0.45  Score=37.91  Aligned_cols=32  Identities=22%  Similarity=0.072  Sum_probs=23.8

Q ss_pred             cEEEEEcC------ccHHH---HHHHHHHHHCCCeEEEEEc
Q 025755            7 ERVCVTGA------GGYIA---SWLVKYLLLKGYMVHGTVR   38 (248)
Q Consensus         7 k~vlVtG~------~g~iG---~~~~~~l~~~g~~V~~~~r   38 (248)
                      |||++.+.      +||+|   .++++.|.++||+|+++..
T Consensus         1 MkIl~~~~~~pP~~~GG~~~~~~~La~~L~~~Gh~V~Vvtp   41 (437)
T d2bisa1           1 MKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTP   41 (437)
T ss_dssp             CEEEEECSCCTTCCSSSHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred             CEEEEECCccCCcccCCHHHHHHHHHHHHHHcCCEEEEEec
Confidence            46666553      47776   5668999999999998863

>d1fl2a2 c.3.1.5 (A:326-451) Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains
species: Escherichia coli [TaxId: 562]

Probab=85.74  E-value=0.94  Score=29.91  Aligned_cols=37  Identities=22%  Similarity=-0.057  Sum_probs=28.4

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCC
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPC   41 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~   41 (248)
                      .++|+|+|.|+ |.-...-+..|.+..-+|+++.|.+.
T Consensus        28 ~~gk~V~VvGg-G~sA~~~A~~L~~~a~~V~li~r~~~   64 (126)
T d1fl2a2          28 FKGKRVAVIGG-GNSGVEAAIDLAGIVEHVTLLEFAPE   64 (126)
T ss_dssp             GBTCEEEEECC-SHHHHHHHHHHHTTBSEEEEECSSSS
T ss_pred             cCCceEEEEeC-CHHHHHHHHhhhccCCceEEEecccc
Confidence            57899999997 44555556677777789999988754

>d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Thermotoga maritima [TaxId: 2336]

Probab=85.73  E-value=0.8  Score=31.74  Aligned_cols=75  Identities=20%  Similarity=0.056  Sum_probs=40.6

Q ss_pred             cEEEEEcCccHHHHHHHH-HHHHC-----CCeEEEEEcCCCchhhHH--hhhhcCCCCCeEEEEccCCCHHHHHHHhCCC
Q 025755            7 ERVCVTGAGGYIASWLVK-YLLLK-----GYMVHGTVRDPCDEKNAH--LKKLEGASENLQLFKTDLLDYEALCAATAGC   78 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~-~l~~~-----g~~V~~~~r~~~~~~~~~--~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~i   78 (248)
                      +||.|.||++ +|...+- .|++.     ..++.+++.+........  ......  .......   +.  +..+.+++.
T Consensus         1 mKIaiIGaGs-~g~~~~~~~l~~~~~~~~~~el~L~Did~~k~~~~~d~~~~~~~--~~~~~~~---t~--~~~~~l~~a   72 (162)
T d1up7a1           1 MRIAVIGGGS-SYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVK--DRFKVLI---SD--TFEGAVVDA   72 (162)
T ss_dssp             CEEEEETTTC-TTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHHHHHHHHT--TSSEEEE---CS--SHHHHHTTC
T ss_pred             CEEEEECCCH-HHHHHHHHHHHhcccccCccEEEEEecCcHHHHHHHHHHHhhhc--cCceEEE---ec--CcccccCCC
Confidence            4799999865 5544442 23321     358999998764322111  111111  1222222   11  234567899


Q ss_pred             CEEEEccccCC
Q 025755           79 TGVFHVACPVP   89 (248)
Q Consensus        79 d~vi~~ag~~~   89 (248)
                      |+||..|+...
T Consensus        73 DvVVita~~~~   83 (162)
T d1up7a1          73 KYVIFQFRPGG   83 (162)
T ss_dssp             SEEEECCCTTH
T ss_pred             CEEEEecccCC
Confidence            99999998743

>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=85.72  E-value=0.57  Score=36.39  Aligned_cols=36  Identities=22%  Similarity=0.132  Sum_probs=28.7

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCC--CeEEEEEcCCC
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKG--YMVHGTVRDPC   41 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g--~~V~~~~r~~~   41 (248)
                      .+|+|+|+|| |--|..++..|+++|  ++|+++.|+..
T Consensus         3 ~~KrVaIIGa-G~sGl~~A~~L~~~~~~~~v~vfEk~~~   40 (335)
T d2gv8a1           3 TIRKIAIIGA-GPSGLVTAKALLAEKAFDQVTLFERRGS   40 (335)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHTTTCCSEEEEECSSSS
T ss_pred             CCCeEEEECc-CHHHHHHHHHHHHhCCCCCEEEEECCCC
Confidence            3578999964 678889999998876  59999988753

>d1xk7a1 c.123.1.1 (A:4-405) Crotonobetainyl-CoA:carnitine CoA-transferase, CaiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: CoA-transferase family III (CaiB/BaiF)
superfamily: CoA-transferase family III (CaiB/BaiF)
family: CoA-transferase family III (CaiB/BaiF)
domain: Crotonobetainyl-CoA:carnitine CoA-transferase, CaiB
species: Escherichia coli [TaxId: 562]

Probab=85.68  E-value=1  Score=36.01  Aligned_cols=83  Identities=12%  Similarity=0.003  Sum_probs=53.2

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCC-CchhhHHhhhhcCCCCCeEEEEccCCCHH---HHHHHhCCCC
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDP-CDEKNAHLKKLEGASENLQLFKTDLLDYE---ALCAATAGCT   79 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~Di~d~~---~~~~~~~~id   79 (248)
                      |+|-+||=.+ ...-|-...+.|++.|++||=+.+-. .+............+.+-+.+..|+.+++   .+.++++.+|
T Consensus         9 L~GirVld~~-~~~agp~~~~~Lad~GAeVIkvE~p~~gd~~r~~~~~~~~~n~~K~si~ldl~~~~G~~~~~~Lv~~aD   87 (402)
T d1xk7a1           9 LAGLRVVFSG-IEIAGPFAGQMFAEWGAEVIWIENVAWADTIRVQPNYPQLSRRNLHALSLNIFKDEGREAFLKLMETTD   87 (402)
T ss_dssp             TTTCEEEEEC-CSSHHHHHHHHHHHTTCEEEEEECSSSCCGGGGSSSHHHHHTTTCEEEEECTTSHHHHHHHHHHHTTCS
T ss_pred             CCCCEEEEeC-ChhHHHHHHHHHHHhCCeEEEECCCCCCCccccCCchhHHhCCCCeEEEEeCcCHHHHHHHHHHHhhcC
Confidence            6777777554 44458888899999999999876432 11100000000011233468899998865   4777888999


Q ss_pred             EEEEcccc
Q 025755           80 GVFHVACP   87 (248)
Q Consensus        80 ~vi~~ag~   87 (248)
                      +||+|--+
T Consensus        88 v~i~n~rp   95 (402)
T d1xk7a1          88 IFIEASKG   95 (402)
T ss_dssp             EEEEECSS
T ss_pred             Cceeeecc
Confidence            99999754

>d1wy7a1 c.66.1.32 (A:4-204) Hypothetical protein PH1948 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein PH1948
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=85.61  E-value=1.6  Score=31.31  Aligned_cols=72  Identities=17%  Similarity=0.156  Sum_probs=48.0

Q ss_pred             CCCCcEEEEEc-CccHHHHHHHHHHHHCCC-eEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCE
Q 025755            3 GEDKERVCVTG-AGGYIASWLVKYLLLKGY-MVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTG   80 (248)
Q Consensus         3 ~l~~k~vlVtG-~~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~   80 (248)
                      +++|++||=.| |+|.+|.++    +..|. +|++++.+.. ......+++.....+..++.+|+.+.      -++.|+
T Consensus        44 dl~g~~vLDlg~GtG~l~i~a----~~~g~~~v~~vdi~~~-~~~~a~~N~~~~~~~~~~~~~d~~~~------~~~fD~  112 (201)
T d1wy7a1          44 DIEGKVVADLGAGTGVLSYGA----LLLGAKEVICVEVDKE-AVDVLIENLGEFKGKFKVFIGDVSEF------NSRVDI  112 (201)
T ss_dssp             SSTTCEEEEETCTTCHHHHHH----HHTTCSEEEEEESCHH-HHHHHHHHTGGGTTSEEEEESCGGGC------CCCCSE
T ss_pred             CCCCCEEEECcCcchHHHHHH----HHcCCCEEEEEcCcHH-HHHHHHHHHHHcCCCceEEECchhhh------CCcCcE
Confidence            36789999888 666676543    34574 8999998863 23333333444456788888887542      357899


Q ss_pred             EEEcc
Q 025755           81 VFHVA   85 (248)
Q Consensus        81 vi~~a   85 (248)
                      ||-|.
T Consensus       113 Vi~nP  117 (201)
T d1wy7a1         113 VIMNP  117 (201)
T ss_dssp             EEECC
T ss_pred             EEEcC
Confidence            98665

>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=85.58  E-value=0.4  Score=34.94  Aligned_cols=76  Identities=16%  Similarity=0.094  Sum_probs=49.6

Q ss_pred             CCcEEEEEcC-ccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEE
Q 025755            5 DKERVCVTGA-GGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFH   83 (248)
Q Consensus         5 ~~k~vlVtG~-~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~   83 (248)
                      .+.+||=.|+ +|..=.++++.. ..| +|++++.++... ... .+.....+++.++..|..+.......+..+|+++|
T Consensus        56 pg~~VLDlGcG~G~~~~~la~~v-~~g-~V~gvDis~~~i-~~a-~~~a~~~~ni~~i~~d~~~~~~~~~~~~~vd~v~~  131 (209)
T d1nt2a_          56 GDERVLYLGAASGTTVSHLADIV-DEG-IIYAVEYSAKPF-EKL-LELVRERNNIIPLLFDASKPWKYSGIVEKVDLIYQ  131 (209)
T ss_dssp             SSCEEEEETCTTSHHHHHHHHHT-TTS-EEEEECCCHHHH-HHH-HHHHHHCSSEEEECSCTTCGGGTTTTCCCEEEEEE
T ss_pred             CCCEEEEeCCcCCHHHHHHHHhc-cCC-eEEEEeCCHHHH-HHH-HHHhhccCCceEEEeeccCccccccccceEEEEEe
Confidence            3678999995 555555555543 444 899998886422 222 22222346899999999988776666667787776


Q ss_pred             c
Q 025755           84 V   84 (248)
Q Consensus        84 ~   84 (248)
                      .
T Consensus       132 ~  132 (209)
T d1nt2a_         132 D  132 (209)
T ss_dssp             C
T ss_pred             c
Confidence            4

>d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=84.98  E-value=0.51  Score=33.98  Aligned_cols=31  Identities=10%  Similarity=-0.070  Sum_probs=27.1

Q ss_pred             EEEEcCccHHHHHHHHHHHHCCCeEEEEEcCC
Q 025755            9 VCVTGAGGYIASWLVKYLLLKGYMVHGTVRDP   40 (248)
Q Consensus         9 vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~   40 (248)
                      ++|.|| |..|...+.++.+.|.+|.++.++.
T Consensus         5 vvVIG~-G~aG~~aA~~a~~~G~kV~iiE~~~   35 (217)
T d1gesa1           5 YIAIGG-GSGGIASINRAAMYGQKCALIEAKE   35 (217)
T ss_dssp             EEEECC-SHHHHHHHHHHHTTTCCEEEEESSC
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCEEEEEeccC
Confidence            577776 8999999999999999999998753

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Peptidoglycan biosynthesis glycosyltransferase MurG
domain: Peptidoglycan biosynthesis glycosyltransferase MurG
species: Escherichia coli [TaxId: 562]

Probab=84.86  E-value=0.58  Score=36.01  Aligned_cols=33  Identities=18%  Similarity=0.171  Sum_probs=23.1

Q ss_pred             cEEEEEcC-ccHH---HHHHHHHHHHCCCeEEEEEcC
Q 025755            7 ERVCVTGA-GGYI---ASWLVKYLLLKGYMVHGTVRD   39 (248)
Q Consensus         7 k~vlVtG~-~g~i---G~~~~~~l~~~g~~V~~~~r~   39 (248)
                      |||+|++| |||=   ..+++++|.++||+|+.++..
T Consensus         1 kkili~~~GtGGHv~~a~al~~~L~~~G~eV~~i~~~   37 (351)
T d1f0ka_           1 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTA   37 (351)
T ss_dssp             CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECT
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHHHHhCCCEEEEEEeC
Confidence            57777764 3211   345889999999999987754

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=84.38  E-value=0.49  Score=36.01  Aligned_cols=32  Identities=25%  Similarity=0.509  Sum_probs=26.9

Q ss_pred             EEEEEcCccHHHHHHHHHHHHCCC-eEEEEEcCC
Q 025755            8 RVCVTGAGGYIASWLVKYLLLKGY-MVHGTVRDP   40 (248)
Q Consensus         8 ~vlVtG~~g~iG~~~~~~l~~~g~-~V~~~~r~~   40 (248)
                      .|+|.|| |-+|..+|..|+++|+ +|++++++.
T Consensus         3 dViIIGa-Gi~G~s~A~~La~~G~~~V~liE~~~   35 (305)
T d1pj5a2           3 RIVIIGA-GIVGTNLADELVTRGWNNITVLDQGP   35 (305)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence            5777776 5799999999999996 699998864

>d2csua3 c.23.4.1 (A:291-453) Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Succinyl-CoA synthetase domains
family: Succinyl-CoA synthetase domains
domain: Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=84.10  E-value=1.1  Score=30.86  Aligned_cols=31  Identities=13%  Similarity=0.097  Sum_probs=27.4

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEE
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHG   35 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~   35 (248)
                      +|+++.|.+.+||.|--++..+.+.|-++--
T Consensus         2 ~G~rvaiit~sGG~~~l~aD~~~~~Gl~l~~   32 (163)
T d2csua3           2 RGNKVAIMTNAGGPGVLTADELDKRGLKLAT   32 (163)
T ss_dssp             SSSEEEEEESCHHHHHHHHHHHHTTTCEECC
T ss_pred             CCCeEEEEECChHHHHHHHHHHHHcCCccCC
Confidence            5789999999999999999999998977643

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=83.61  E-value=1.3  Score=31.99  Aligned_cols=79  Identities=13%  Similarity=-0.024  Sum_probs=47.2

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcC-CCCCeEEEEccCCCHHHHHHHhCCCCEEEE
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEG-ASENLQLFKTDLLDYEALCAATAGCTGVFH   83 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Di~d~~~~~~~~~~id~vi~   83 (248)
                      .+.+||-.|++.|--..+..++.....+|+.++.+... .....+.+.. ...++.++.+|..+..   ..-...|.|+.
T Consensus        75 ~g~~VLdiG~GtG~~s~~la~~~~~~g~V~~id~~~~~-~~~a~~~~~~~~~~n~~~~~~d~~~~~---~~~~~fD~I~~  150 (213)
T d1dl5a1          75 KGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKI-CEIAKRNVERLGIENVIFVCGDGYYGV---PEFSPYDVIFV  150 (213)
T ss_dssp             TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHH-HHHHHHHHHHTTCCSEEEEESCGGGCC---GGGCCEEEEEE
T ss_pred             ccceEEEecCccchhHHHHHHHhCCCCcEEEeecchhh-HHHhhhhHhhhcccccccccCchHHcc---ccccchhhhhh
Confidence            46799999966655555554555556789999887642 2222222221 2356778888875321   11235798887


Q ss_pred             cccc
Q 025755           84 VACP   87 (248)
Q Consensus        84 ~ag~   87 (248)
                      +++.
T Consensus       151 ~~~~  154 (213)
T d1dl5a1         151 TVGV  154 (213)
T ss_dssp             CSBB
T ss_pred             hccH
Confidence            7764

>d1q7ea_ c.123.1.1 (A:) Hypothetical protein YfdW {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: CoA-transferase family III (CaiB/BaiF)
superfamily: CoA-transferase family III (CaiB/BaiF)
family: CoA-transferase family III (CaiB/BaiF)
domain: Hypothetical protein YfdW
species: Escherichia coli [TaxId: 562]

Probab=83.44  E-value=3.3  Score=32.94  Aligned_cols=85  Identities=13%  Similarity=-0.053  Sum_probs=52.7

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCC-CchhhHHh--------hhhcCCCCCeEEEEccCCCHHH---H
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDP-CDEKNAHL--------KKLEGASENLQLFKTDLLDYEA---L   71 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~-~~~~~~~~--------~~~~~~~~~~~~~~~Di~d~~~---~   71 (248)
                      |+|-+||=.+ ...-|-...+.|++.|++||=+.+-. -+......        ..+...+.+=+.+..|+.+++.   +
T Consensus         5 L~GirVld~~-~~~agp~~~~~Lad~GAeVIkvE~p~~gd~~R~~~~~~~~~~s~~~~~~nr~K~si~lDL~~~~g~~~~   83 (417)
T d1q7ea_           5 LQGIKVLDFT-GVQSGPSCTQMLAWFGADVIKIERPGVGDVTRHQLRDIPDIDALYFTMLNSNKRSIELNTKTAEGKEVM   83 (417)
T ss_dssp             TTTCEEEECC-CTTHHHHHHHHHHHTTCEEEEEECTTTCCGGGTTTCSSTTSCCHHHHTTCTTCEEEECCTTSHHHHHHH
T ss_pred             CCCCEEEEcC-ChhHHHHHHHHHHHhCCeEEEECCCCCCCchhccCCCCCCCccHHHHHhCCCCeEEEEeCcCHHHHHHH
Confidence            6776666544 44567788888999999999887521 11100000        0011112234688999988654   6


Q ss_pred             HHHhCCCCEEEEccccCC
Q 025755           72 CAATAGCTGVFHVACPVP   89 (248)
Q Consensus        72 ~~~~~~id~vi~~ag~~~   89 (248)
                      ++++++.|+||+|--+..
T Consensus        84 ~~Li~~aDv~i~n~~pg~  101 (417)
T d1q7ea_          84 EKLIREADILVENFHPGA  101 (417)
T ss_dssp             HHHHHHCSEEEECCCC--
T ss_pred             HHHHhcCcccEeccCCCc
Confidence            677889999999976543

>d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=83.42  E-value=0.48  Score=30.31  Aligned_cols=36  Identities=22%  Similarity=-0.093  Sum_probs=29.2

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCC
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDP   40 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~   40 (248)
                      +++|+|+|.|++ --|.-++..|++.+.+|+...|..
T Consensus        30 f~gK~VlVVG~g-~Sa~dia~~l~~~ak~v~~~~~r~   65 (107)
T d2gv8a2          30 FVGESVLVVGGA-SSANDLVRHLTPVAKHPIYQSLLG   65 (107)
T ss_dssp             GTTCCEEEECSS-HHHHHHHHHHTTTSCSSEEEECTT
T ss_pred             cCCCeEEEECCC-CCHHHHHHHHHHhcCEEEEEEecC
Confidence            689999999976 578889999988877777666654

>d1g8sa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=83.38  E-value=1.4  Score=32.29  Aligned_cols=76  Identities=12%  Similarity=0.042  Sum_probs=49.5

Q ss_pred             CCcEEEEEc-CccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEE
Q 025755            5 DKERVCVTG-AGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFH   83 (248)
Q Consensus         5 ~~k~vlVtG-~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~   83 (248)
                      .+.+||=.| |+|..-+++++. .. +..|++++.++.-  ...+.......+++..+..|..++.........+|++++
T Consensus        74 pG~~VLDlGcGsG~~~~~la~~-~~-~g~V~aVDiS~~~--i~~a~~~a~~~~ni~~i~~d~~~~~~~~~~~~~v~~i~~  149 (230)
T d1g8sa_          74 RDSKILYLGASAGTTPSHVADI-AD-KGIVYAIEYAPRI--MRELLDACAERENIIPILGDANKPQEYANIVEKVDVIYE  149 (230)
T ss_dssp             TTCEEEEESCCSSHHHHHHHHH-TT-TSEEEEEESCHHH--HHHHHHHTTTCTTEEEEECCTTCGGGGTTTCCCEEEEEE
T ss_pred             CCCEEEEeCEEcCHHHHHHHHh-CC-CCEEEEEeCcHHH--HHHHHHHHhhhcccceEEEeeccCcccccccceeEEeec
Confidence            478999999 666667777764 33 3599999988632  222233344467888899999887765544444555554


Q ss_pred             c
Q 025755           84 V   84 (248)
Q Consensus        84 ~   84 (248)
                      .
T Consensus       150 ~  150 (230)
T d1g8sa_         150 D  150 (230)
T ss_dssp             C
T ss_pred             c
Confidence            3

>d1pvva2 c.78.1.1 (A:151-313) Ornithine transcarbamoylase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: ATC-like
superfamily: Aspartate/ornithine carbamoyltransferase
family: Aspartate/ornithine carbamoyltransferase
domain: Ornithine transcarbamoylase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=83.10  E-value=2.8  Score=28.73  Aligned_cols=77  Identities=14%  Similarity=0.093  Sum_probs=48.5

Q ss_pred             CCCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcC----CCCCeEEEEccCCCHHHHHHHhCCC
Q 025755            3 GEDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEG----ASENLQLFKTDLLDYEALCAATAGC   78 (248)
Q Consensus         3 ~l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~~Di~d~~~~~~~~~~i   78 (248)
                      +++|++|++.|-.+.+-..+++.|..-|.+++++.-...............    ....+.+.       +++..++++.
T Consensus         1 sl~gl~Ia~VGD~~nv~~Sli~~l~~~g~~v~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~ea~~~a   73 (163)
T d1pvva2           1 TIKGVKVVYVGDGNNVAHSLMIAGTKLGADVVVATPEGYEPDEKVIKWAEQNAAESGGSFELL-------HDPVKAVKDA   73 (163)
T ss_dssp             CCTTCEEEEESCCCHHHHHHHHHHHHTTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEEEE-------SCHHHHTTTC
T ss_pred             CcCCCEEEEECCCcHHHHHHHHHHHHcCCeEEEecccccCCChHHHHHHHHhhhcccceEEEe-------cCHHHHhhhc
Confidence            378999999999888989999988889999888764332222222221111    11122211       2455678899


Q ss_pred             CEEEEccc
Q 025755           79 TGVFHVAC   86 (248)
Q Consensus        79 d~vi~~ag   86 (248)
                      |+|+---.
T Consensus        74 dviy~~~~   81 (163)
T d1pvva2          74 DVIYTDVW   81 (163)
T ss_dssp             SEEEECCC
T ss_pred             cEEeecce
Confidence            98875443

>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Arginine methyltransferase, HMT1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=83.10  E-value=1.8  Score=33.39  Aligned_cols=75  Identities=21%  Similarity=0.191  Sum_probs=45.4

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCC-eEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEE
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGY-MVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVF   82 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi   82 (248)
                      +++++||-.|++.|+   ++..+++.|+ +|++++.+.................++.++.+|+.+...   --++.|+|+
T Consensus        37 ~~~~~VLDlGcGtG~---ls~~aa~~Ga~~V~avd~s~~~~~a~~~~~~~~~~~~i~~i~~~~~~l~~---~~~~~D~i~  110 (328)
T d1g6q1_          37 FKDKIVLDVGCGTGI---LSMFAAKHGAKHVIGVDMSSIIEMAKELVELNGFSDKITLLRGKLEDVHL---PFPKVDIII  110 (328)
T ss_dssp             HTTCEEEEETCTTSH---HHHHHHHTCCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSCC---SSSCEEEEE
T ss_pred             CCcCEEEEeCCCCCH---HHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhCccccceEEEeehhhccC---cccceeEEE
Confidence            368999999966543   2344556786 788888764211111111223345679999999976431   123678887


Q ss_pred             Ec
Q 025755           83 HV   84 (248)
Q Consensus        83 ~~   84 (248)
                      ..
T Consensus       111 se  112 (328)
T d1g6q1_         111 SE  112 (328)
T ss_dssp             EC
T ss_pred             EE
Confidence            64

>d1xhca1 c.3.1.5 (A:1-103,A:226-289) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=82.72  E-value=0.78  Score=31.36  Aligned_cols=31  Identities=29%  Similarity=0.334  Sum_probs=24.9

Q ss_pred             EEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCC
Q 025755            8 RVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDP   40 (248)
Q Consensus         8 ~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~   40 (248)
                      ||+|.|| |.+|.+++..|. ++.+|+++.+..
T Consensus         2 rVvIIGg-G~~G~e~A~~l~-~~~~Vtvv~~~~   32 (167)
T d1xhca1           2 KVVIVGN-GPGGFELAKQLS-QTYEVTVIDKEP   32 (167)
T ss_dssp             EEEEECC-SHHHHHHHHHHT-TTSEEEEECSSS
T ss_pred             eEEEECC-cHHHHHHHHHHH-cCCCEEEEeccc
Confidence            6777765 599999999885 588999998754

>d1vdca2 c.3.1.5 (A:118-243) Thioredoxin reductase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=82.60  E-value=1.5  Score=29.09  Aligned_cols=37  Identities=22%  Similarity=0.102  Sum_probs=28.7

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCC
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPC   41 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~   41 (248)
                      +++|.|+|.|+ |--.-.-+..|.+.--+|+++.|+..
T Consensus        32 frgk~V~VvGg-GdsA~e~A~~L~~~a~~V~li~r~~~   68 (130)
T d1vdca2          32 FRNKPLAVIGG-GDSAMEEANFLTKYGSKVYIIHRRDA   68 (130)
T ss_dssp             GTTSEEEEECC-SHHHHHHHHHHTTTSSEEEEECSSSS
T ss_pred             hCCCEEEEEcC-chHHHHHHHHHhCCCCcEEEEEeccc
Confidence            57999999998 45555666677777789999988764

>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ribosomal protein L11 methyltransferase PrmA
domain: PrmA-like protein TTHA0656 (TT0836)
species: Thermus thermophilus [TaxId: 274]

Probab=82.56  E-value=1.5  Score=32.70  Aligned_cols=73  Identities=11%  Similarity=-0.033  Sum_probs=44.5

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEE
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFH   83 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~   83 (248)
                      ..+++||=.|++.|+=   +..+++.|++|++++.++.. .....++.....-+..++.+|+.+..    ..+..|+|+-
T Consensus       119 ~~g~~VLDiGcGsG~l---~i~aa~~g~~V~gvDis~~a-v~~A~~na~~n~~~~~~~~~d~~~~~----~~~~fD~V~a  190 (254)
T d2nxca1         119 RPGDKVLDLGTGSGVL---AIAAEKLGGKALGVDIDPMV-LPQAEANAKRNGVRPRFLEGSLEAAL----PFGPFDLLVA  190 (254)
T ss_dssp             CTTCEEEEETCTTSHH---HHHHHHTTCEEEEEESCGGG-HHHHHHHHHHTTCCCEEEESCHHHHG----GGCCEEEEEE
T ss_pred             CccCEEEEcccchhHH---HHHHHhcCCEEEEEECChHH-HHHHHHHHHHcCCceeEEeccccccc----cccccchhhh
Confidence            4678999999666542   23455679999999998753 22222333333345677777764211    1246788875


Q ss_pred             c
Q 025755           84 V   84 (248)
Q Consensus        84 ~   84 (248)
                      |
T Consensus       191 n  191 (254)
T d2nxca1         191 N  191 (254)
T ss_dssp             E
T ss_pred             c
Confidence            4

>d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=82.54  E-value=0.12  Score=37.97  Aligned_cols=27  Identities=30%  Similarity=0.167  Sum_probs=22.2

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCCCeEE
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKGYMVH   34 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g~~V~   34 (248)
                      ++|+|.|| |-+|..+|..|+++|++|+
T Consensus         1 mkV~VIGa-Gi~GlstA~~L~~~G~~v~   27 (246)
T d1kifa1           1 MRVVVIGA-GVIGLSTALCIHERYHSVL   27 (246)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHHTTTS
T ss_pred             CEEEEECc-hHHHHHHHHHHHHCCCCce
Confidence            46888875 6799999999999998654

>d1uwva2 c.66.1.40 (A:75-432) rRNA (Uracil-5-)-methyltransferase RumA, catalytic domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: (Uracil-5-)-methyltransferase
domain: rRNA (Uracil-5-)-methyltransferase RumA, catalytic domain
species: Escherichia coli [TaxId: 562]

Probab=82.43  E-value=1.1  Score=35.15  Aligned_cols=96  Identities=18%  Similarity=0.116  Sum_probs=55.6

Q ss_pred             EEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhh-cCCCCCeEEEEccCCCHHH-HHHHhCCCCEEEEcccc
Q 025755           10 CVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKL-EGASENLQLFKTDLLDYEA-LCAATAGCTGVFHVACP   87 (248)
Q Consensus        10 lVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~Di~d~~~-~~~~~~~id~vi~~ag~   87 (248)
                      =.-.|+|.+|..++    +.+.+|+++..+.... ....+.. .....++.++.+|+.+.-. ........|+||-.   
T Consensus       218 DLycG~G~fsl~La----~~~~~V~gvE~~~~ai-~~A~~na~~n~i~n~~~~~~~~~~~~~~~~~~~~~~d~vilD---  289 (358)
T d1uwva2         218 DLFCGMGNFTLPLA----TQAASVVGVEGVPALV-EKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKVLLD---  289 (358)
T ss_dssp             EESCTTTTTHHHHH----TTSSEEEEEESCHHHH-HHHHHHHHHTTCCSEEEEECCTTSCCSSSGGGTTCCSEEEEC---
T ss_pred             Eecccccccchhcc----ccccEEEeccCcHHHH-HHHHHhHHhcccccceeeecchhhhhhhhhhhhccCceEEeC---
Confidence            35678888888765    4578999998876422 2222221 1224678999998865321 11122356877632   


Q ss_pred             CCCCCCCCccccchhhhHHHHHHHHHHHHhcCCCEEEEEec
Q 025755           88 VPVGKVPNPEVQLIDPAVVGTKNVLNSCVKAKVKRVVVVSS  128 (248)
Q Consensus        88 ~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~iV~vSS  128 (248)
                       ++.       .=.       ..+++.+.+.+.++|||||-
T Consensus       290 -PPR-------~G~-------~~~~~~l~~~~~~~ivYVSC  315 (358)
T d1uwva2         290 -PAR-------AGA-------AGVMQQIIKLEPIRIVYVSC  315 (358)
T ss_dssp             -CCT-------TCC-------HHHHHHHHHHCCSEEEEEES
T ss_pred             -CCC-------ccH-------HHHHHHHHHcCCCEEEEEeC
Confidence             221       111       12455556667889999984

>d2afhe1 c.37.1.10 (E:1-289) Nitrogenase iron protein {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Nitrogenase iron protein
species: Azotobacter vinelandii [TaxId: 354]

Probab=82.41  E-value=0.55  Score=35.70  Aligned_cols=36  Identities=28%  Similarity=0.181  Sum_probs=29.7

Q ss_pred             CCcEEEEEcCccHHHHH-----HHHHHHHCCCeEEEEEcCCC
Q 025755            5 DKERVCVTGAGGYIASW-----LVKYLLLKGYMVHGTVRDPC   41 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~-----~~~~l~~~g~~V~~~~r~~~   41 (248)
                      .||+|.|.| =||+|+.     ++..|++.|++|.+++-+++
T Consensus         1 ~Mr~Iaisg-KGGVGKTT~a~NLA~~LA~~G~rVLlID~DpQ   41 (289)
T d2afhe1           1 AMRQCAIYG-KGGIGKSTTTQNLVAALAEMGKKVMIVGCDPK   41 (289)
T ss_dssp             CCEEEEEEE-CTTSSHHHHHHHHHHHHHHTTCCEEEEEECSS
T ss_pred             CccEEEEEC-CCCCCHHHHHHHHHHHHHHCCCCEEEEecCCC
Confidence            378899987 6788875     57888899999999998864

>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Acetaldehyde dehydrogenase (acylating)
species: Pseudomonas sp. [TaxId: 306]

Probab=81.73  E-value=1.8  Score=29.75  Aligned_cols=36  Identities=22%  Similarity=0.231  Sum_probs=23.5

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHH-CC-CeEEEE-EcCCC
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLL-KG-YMVHGT-VRDPC   41 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~-~g-~~V~~~-~r~~~   41 (248)
                      +..++.|.| +|+||..+..++++ .. .+++.+ +|+..
T Consensus         3 kkirvaIIG-aG~ig~~~~~~~l~~~~~~el~avas~~~~   41 (157)
T d1nvmb1           3 QKLKVAIIG-SGNIGTDLMIKVLRNAKYLEMGAMVGIDAA   41 (157)
T ss_dssp             SCEEEEEEC-CSHHHHHHHHHHHHHCSSEEEEEEECSCTT
T ss_pred             CCcEEEEEc-CcHHHHHHHHHHHhhCCcceEEEEEecchh
Confidence            346899999 89999975544554 33 466655 45543

>d2bw0a2 c.65.1.1 (A:1-203) 10-formyltetrahydrofolate dehydrogenase domain 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: 10-formyltetrahydrofolate dehydrogenase domain 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.52  E-value=1.5  Score=31.50  Aligned_cols=31  Identities=19%  Similarity=0.198  Sum_probs=24.8

Q ss_pred             cEEEEEcCccHHHHHHHHHHHHCCCeEEEEEc
Q 025755            7 ERVCVTGAGGYIASWLVKYLLLKGYMVHGTVR   38 (248)
Q Consensus         7 k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r   38 (248)
                      |||++.|. +..|..+.+.|++.|++|+++..
T Consensus         1 MkI~~~G~-~~~~~~~l~~L~~~~~~i~~V~t   31 (203)
T d2bw0a2           1 MKIAVIGQ-SLFGQEVYCHLRKEGHEVVGVFT   31 (203)
T ss_dssp             CEEEEECC-HHHHHHHHHHHHHTTCEEEEEEE
T ss_pred             CEEEEEcC-CHHHHHHHHHHHHCCCcEEEEEc
Confidence            46777765 46899999999999999986653

>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical protein PH0226
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=81.44  E-value=1.8  Score=30.93  Aligned_cols=74  Identities=12%  Similarity=-0.001  Sum_probs=45.6

Q ss_pred             CcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCCCCCeEEEEccCCCHHHHHHHhCCCCEEEEcc
Q 025755            6 KERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGASENLQLFKTDLLDYEALCAATAGCTGVFHVA   85 (248)
Q Consensus         6 ~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~id~vi~~a   85 (248)
                      +.+||=.|++.|.   ++..|++.|++|++++.+... .....+........+.++..|..+...   --+..|+|+...
T Consensus        38 ~~~ILDiGcG~G~---~~~~la~~~~~v~giD~S~~~-i~~ak~~~~~~~~~~~~~~~d~~~l~~---~~~~fD~I~~~~  110 (226)
T d1ve3a1          38 RGKVLDLACGVGG---FSFLLEDYGFEVVGVDISEDM-IRKAREYAKSRESNVEFIVGDARKLSF---EDKTFDYVIFID  110 (226)
T ss_dssp             CCEEEEETCTTSH---HHHHHHHTTCEEEEEESCHHH-HHHHHHHHHHTTCCCEEEECCTTSCCS---CTTCEEEEEEES
T ss_pred             CCEEEEECCCcch---hhhhHhhhhcccccccccccc-hhhhhhhhccccccccccccccccccc---cCcCceEEEEec
Confidence            4589999966644   445667789999999987632 222222222234567888888876321   013578888654


Q ss_pred             c
Q 025755           86 C   86 (248)
Q Consensus        86 g   86 (248)
                      .
T Consensus       111 ~  111 (226)
T d1ve3a1         111 S  111 (226)
T ss_dssp             C
T ss_pred             c
Confidence            3

>d1ps9a2 c.3.1.1 (A:466-627) 2,4-dienoyl-CoA reductase, C-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=81.21  E-value=0.39  Score=33.06  Aligned_cols=29  Identities=24%  Similarity=0.225  Sum_probs=25.3

Q ss_pred             CCcEEEEEcCccHHHHHHHHHHHHCCCeEE
Q 025755            5 DKERVCVTGAGGYIASWLVKYLLLKGYMVH   34 (248)
Q Consensus         5 ~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~   34 (248)
                      .+|+|+|.|| |.+|..++..+.+.|.++.
T Consensus        28 ~gkrVvVIGg-G~~g~d~a~~~~r~G~~~~   56 (162)
T d1ps9a2          28 VGNKVAIIGC-GGIGFDTAMYLSQPGESTS   56 (162)
T ss_dssp             CCSEEEEECC-HHHHHHHHHHHTCCSSCGG
T ss_pred             cCCceEEEcC-chhHHHHHHHHHHcCCccc
Confidence            5789999996 8999999999999997654

>d1rp0a1 c.3.1.6 (A:7-284) Thiazole biosynthetic enzyme Thi4 {Thale cress(Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Thi4-like
domain: Thiazole biosynthetic enzyme Thi4
species: Thale cress(Arabidopsis thaliana) [TaxId: 3702]

Probab=80.81  E-value=0.93  Score=34.08  Aligned_cols=32  Identities=19%  Similarity=0.024  Sum_probs=28.0

Q ss_pred             EEEEEcCccHHHHHHHHHHHHC-CCeEEEEEcCC
Q 025755            8 RVCVTGAGGYIASWLVKYLLLK-GYMVHGTVRDP   40 (248)
Q Consensus         8 ~vlVtG~~g~iG~~~~~~l~~~-g~~V~~~~r~~   40 (248)
                      -|+|.|| |.-|...+..|+++ |++|+++.+..
T Consensus        35 DViVIGa-GpaGL~aA~~LA~~~G~~V~vlE~~~   67 (278)
T d1rp0a1          35 DVVVVGA-GSAGLSAAYEISKNPNVQVAIIEQSV   67 (278)
T ss_dssp             EEEEECC-SHHHHHHHHHHHTSTTSCEEEEESSS
T ss_pred             CEEEECC-CHHHHHHHHHHHHccCCeEEEEecCC
Confidence            4788887 88999999999874 99999999875

>d2b3ta1 c.66.1.30 (A:2-275) N5-glutamine methyltransferase, HemK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: N5-glutamine methyltransferase, HemK
domain: N5-glutamine methyltransferase, HemK
species: Escherichia coli [TaxId: 562]

Probab=80.72  E-value=1.4  Score=33.39  Aligned_cols=77  Identities=14%  Similarity=0.077  Sum_probs=49.3

Q ss_pred             CcEEEEEc-CccHHHHHHHHHHHHCCCeEEEEEcCCCchhhHHhhhhcCC-CCCeEEEEccCCCHHHHHHHhCCCCEEEE
Q 025755            6 KERVCVTG-AGGYIASWLVKYLLLKGYMVHGTVRDPCDEKNAHLKKLEGA-SENLQLFKTDLLDYEALCAATAGCTGVFH   83 (248)
Q Consensus         6 ~k~vlVtG-~~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Di~d~~~~~~~~~~id~vi~   83 (248)
                      +.+|+=.| |+|.||..++.++  ...+|++++.+.... ....++.... -.++.++++|+.+.-.    -.+.|+||.
T Consensus       109 ~~~vlDlGtGSG~I~i~la~~~--p~~~v~avDis~~Al-~~A~~Na~~~~~~~v~~~~~d~~~~~~----~~~fDlIvs  181 (274)
T d2b3ta1         109 PCRILDLGTGTGAIALALASER--PDCEIIAVDRMPDAV-SLAQRNAQHLAIKNIHILQSDWFSALA----GQQFAMIVS  181 (274)
T ss_dssp             CCEEEEETCTTSHHHHHHHHHC--TTSEEEEECSSHHHH-HHHHHHHHHHTCCSEEEECCSTTGGGT----TCCEEEEEE
T ss_pred             ccceeeeehhhhHHHHHHHhhC--CcceeeeccchhHHH-hHHHHHHHHhCcccceeeecccccccC----CCceeEEEe
Confidence            44677777 8888988888764  357899998876422 2222222211 2469999999986421    136899999


Q ss_pred             ccccCC
Q 025755           84 VACPVP   89 (248)
Q Consensus        84 ~ag~~~   89 (248)
                      |-=..+
T Consensus       182 NPPYi~  187 (274)
T d2b3ta1         182 NPPYID  187 (274)
T ss_dssp             CCCCBC
T ss_pred             cchhhh
Confidence            854443

>d2vjma1 c.123.1.1 (A:2-428) Formyl-CoA transferase {Oxalobacter formigenes [TaxId: 847]}

class: Alpha and beta proteins (a/b)
fold: CoA-transferase family III (CaiB/BaiF)
superfamily: CoA-transferase family III (CaiB/BaiF)
family: CoA-transferase family III (CaiB/BaiF)
domain: Formyl-CoA transferase
species: Oxalobacter formigenes [TaxId: 847]

Probab=80.37  E-value=1.7  Score=34.79  Aligned_cols=83  Identities=14%  Similarity=-0.059  Sum_probs=52.9

Q ss_pred             CCCcEEEEEcCccHHHHHHHHHHHHCCCeEEEEEcCC-CchhhHHh--------hhhcCCCCCeEEEEccCCCHH---HH
Q 025755            4 EDKERVCVTGAGGYIASWLVKYLLLKGYMVHGTVRDP-CDEKNAHL--------KKLEGASENLQLFKTDLLDYE---AL   71 (248)
Q Consensus         4 l~~k~vlVtG~~g~iG~~~~~~l~~~g~~V~~~~r~~-~~~~~~~~--------~~~~~~~~~~~~~~~Di~d~~---~~   71 (248)
                      |+|-+||=.+ ...-|-...+.|++.|++||=+.+-. .+......        ......+.+=+.+.+|+.+++   .+
T Consensus         4 L~GirVld~~-~~~agp~~~~~LadlGAeVIkvE~p~~gd~~R~~~~~~~~~~s~~~~~~nr~K~si~lDL~~~~g~~~~   82 (427)
T d2vjma1           4 LDGINVLDFT-HVQAGPACTQMMGFLGANVIKIERRGSGDMTRGWLQDKPNVDSLYFTMFNCNKRSIELDMKTPEGKELL   82 (427)
T ss_dssp             TTTCEEEECC-CTTHHHHHHHHHHHTTCEEEEEECTTTCSGGGGSSCSSTTSCCHHHHTTCSSCEEEECCTTSHHHHHHH
T ss_pred             CCCCEEEEcC-ChhHHHHHHHHHHHhCCeEEEECCCCCCCcccccCCCCCCCccHHHHHhCCCCeEEEEeCcCHHHHHHH
Confidence            6676666554 34568888889999999999887531 11100000        000111223467889998876   47


Q ss_pred             HHHhCCCCEEEEcccc
Q 025755           72 CAATAGCTGVFHVACP   87 (248)
Q Consensus        72 ~~~~~~id~vi~~ag~   87 (248)
                      .++++.+|+||+|-.+
T Consensus        83 ~~Lv~~aDv~i~n~~p   98 (427)
T d2vjma1          83 EQMIKKADVMVENFGP   98 (427)
T ss_dssp             HHHHHHCSEEEECCST
T ss_pred             HHHHHhCCeeeECCCc
Confidence            7788899999999754