Query 025756
Match_columns 248
No_of_seqs 181 out of 1464
Neff 6.6
Searched_HMMs 29240
Date Mon Mar 25 16:54:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025756.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025756hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4g2e_A Peroxiredoxin; redox pr 100.0 9.2E-29 3.2E-33 202.0 13.5 148 69-248 4-155 (157)
2 4gqc_A Thiol peroxidase, perox 100.0 1.3E-29 4.6E-34 209.0 8.1 148 68-247 4-156 (164)
3 3mng_A Peroxiredoxin-5, mitoch 99.9 5.8E-26 2E-30 189.7 16.3 151 66-246 12-173 (173)
4 3uma_A Hypothetical peroxiredo 99.9 4.7E-25 1.6E-29 185.9 15.4 147 68-246 25-184 (184)
5 1tp9_A Peroxiredoxin, PRX D (t 99.9 5E-24 1.7E-28 174.3 15.2 145 69-246 4-162 (162)
6 3p7x_A Probable thiol peroxida 99.9 1.2E-23 4E-28 172.1 17.0 142 67-248 18-165 (166)
7 3tue_A Tryparedoxin peroxidase 99.9 3.7E-24 1.3E-28 185.8 13.9 143 67-247 24-181 (219)
8 3sbc_A Peroxiredoxin TSA1; alp 99.9 7.3E-24 2.5E-28 183.5 14.3 142 68-247 22-177 (216)
9 1psq_A Probable thiol peroxida 99.9 4.8E-23 1.6E-27 168.0 16.7 141 68-247 15-161 (163)
10 2yzh_A Probable thiol peroxida 99.9 3E-23 1E-27 170.2 15.4 143 68-247 20-168 (171)
11 2wfc_A Peroxiredoxin 5, PRDX5; 99.9 7.7E-23 2.6E-27 169.2 17.6 146 69-246 3-159 (167)
12 3gkn_A Bacterioferritin comigr 99.9 4.1E-23 1.4E-27 167.2 15.6 150 65-247 3-158 (163)
13 2pwj_A Mitochondrial peroxired 99.9 2.3E-23 7.8E-28 172.7 14.0 146 69-246 7-171 (171)
14 3drn_A Peroxiredoxin, bacterio 99.9 7.5E-23 2.6E-27 166.2 16.2 140 69-247 2-145 (161)
15 1q98_A Thiol peroxidase, TPX; 99.9 3.2E-23 1.1E-27 169.5 13.7 143 69-247 17-165 (165)
16 3zrd_A Thiol peroxidase; oxido 99.9 3.7E-23 1.3E-27 175.6 14.3 144 68-247 51-200 (200)
17 1xiy_A Peroxiredoxin, pfaop; a 99.9 7.5E-23 2.6E-27 172.7 15.1 147 70-248 2-179 (182)
18 4f82_A Thioredoxin reductase; 99.9 6.8E-23 2.3E-27 172.3 14.8 148 69-248 10-176 (176)
19 3keb_A Probable thiol peroxida 99.9 8.7E-23 3E-27 177.7 15.9 142 67-247 20-172 (224)
20 3ixr_A Bacterioferritin comigr 99.9 4.2E-23 1.4E-27 171.6 13.2 149 66-247 18-174 (179)
21 2xhf_A Peroxiredoxin 5; oxidor 99.9 3.9E-23 1.3E-27 173.0 10.3 148 68-247 13-170 (171)
22 1xvw_A Hypothetical protein RV 99.9 8E-22 2.7E-26 158.8 17.4 142 69-247 9-156 (160)
23 2v2g_A Peroxiredoxin 6; oxidor 99.9 2.1E-22 7.3E-27 175.7 14.9 147 69-247 3-161 (233)
24 1prx_A HORF6; peroxiredoxin, h 99.9 3.7E-22 1.3E-26 172.8 15.7 148 68-247 4-165 (224)
25 1nm3_A Protein HI0572; hybrid, 99.9 4.5E-22 1.5E-26 172.3 15.7 147 69-247 3-163 (241)
26 2c0d_A Thioredoxin peroxidase 99.9 7.1E-22 2.4E-26 170.7 16.4 141 69-247 25-180 (221)
27 1n8j_A AHPC, alkyl hydroperoxi 99.9 1.2E-21 4E-26 163.9 15.0 140 70-247 2-152 (186)
28 1xcc_A 1-Cys peroxiredoxin; un 99.9 1.1E-21 3.6E-26 169.5 14.8 147 69-247 3-162 (220)
29 2i81_A 2-Cys peroxiredoxin; st 99.9 4.7E-21 1.6E-25 164.1 16.7 143 67-247 19-176 (213)
30 2a4v_A Peroxiredoxin DOT5; yea 99.9 7.5E-22 2.6E-26 159.8 10.6 131 66-234 4-139 (159)
31 2h01_A 2-Cys peroxiredoxin; th 99.9 3.8E-21 1.3E-25 160.6 13.7 140 70-247 1-155 (192)
32 2pn8_A Peroxiredoxin-4; thiore 99.9 6.9E-21 2.3E-25 162.9 15.4 143 67-247 17-173 (211)
33 1xvq_A Thiol peroxidase; thior 99.9 5E-21 1.7E-25 158.1 13.9 143 68-247 17-164 (175)
34 1we0_A Alkyl hydroperoxide red 99.9 1.1E-20 3.6E-25 157.0 15.6 140 70-247 2-153 (187)
35 3tjj_A Peroxiredoxin-4; thiore 99.9 7.5E-21 2.6E-25 167.9 15.3 143 67-247 60-216 (254)
36 3qpm_A Peroxiredoxin; oxidored 99.9 1.3E-20 4.6E-25 164.6 16.3 143 67-247 46-202 (240)
37 1qmv_A Human thioredoxin perox 99.8 2.7E-20 9.1E-25 156.2 16.6 142 68-247 4-159 (197)
38 1uul_A Tryparedoxin peroxidase 99.8 2.5E-20 8.6E-25 157.2 16.5 142 68-247 5-161 (202)
39 3a2v_A Probable peroxiredoxin; 99.8 9.4E-21 3.2E-25 167.1 14.3 142 69-247 5-158 (249)
40 2jsy_A Probable thiol peroxida 99.8 5.1E-21 1.8E-25 155.6 11.3 141 68-247 17-163 (167)
41 3ztl_A Thioredoxin peroxidase; 99.8 2.4E-20 8.2E-25 160.3 15.8 142 68-247 39-194 (222)
42 1zye_A Thioredoxin-dependent p 99.8 3.6E-20 1.2E-24 159.2 16.3 142 68-247 26-181 (220)
43 1zof_A Alkyl hydroperoxide-red 99.8 3.5E-20 1.2E-24 155.4 15.2 140 70-247 2-157 (198)
44 4eo3_A Bacterioferritin comigr 99.8 1.4E-20 4.9E-25 171.4 13.7 130 73-247 2-135 (322)
45 2bmx_A Alkyl hydroperoxidase C 99.8 5.6E-20 1.9E-24 154.1 16.0 141 68-247 3-166 (195)
46 3gl3_A Putative thiol:disulfid 99.8 4.3E-19 1.5E-23 140.9 15.8 133 69-246 3-140 (152)
47 3kcm_A Thioredoxin family prot 99.8 6.1E-19 2.1E-23 140.3 15.1 134 70-247 3-142 (154)
48 3u5r_E Uncharacterized protein 99.8 4.2E-19 1.4E-23 151.8 14.5 120 68-230 31-162 (218)
49 1xzo_A BSSCO, hypothetical pro 99.8 5.8E-19 2E-23 143.4 13.8 151 66-247 4-168 (174)
50 3ewl_A Uncharacterized conserv 99.8 2.9E-18 9.9E-23 134.8 16.5 126 70-247 2-137 (142)
51 1jfu_A Thiol:disulfide interch 99.8 1.3E-18 4.3E-23 143.5 14.8 139 68-246 33-178 (186)
52 3hdc_A Thioredoxin family prot 99.8 1.7E-18 5.7E-23 139.4 14.0 141 59-245 5-149 (158)
53 2ywi_A Hypothetical conserved 99.8 3.8E-18 1.3E-22 141.5 15.9 137 67-246 16-169 (196)
54 3eur_A Uncharacterized protein 99.8 6.8E-18 2.3E-22 133.3 15.7 128 68-247 4-141 (142)
55 3me7_A Putative uncharacterize 99.8 3.1E-18 1.1E-22 140.9 13.4 139 70-247 2-158 (170)
56 2lrt_A Uncharacterized protein 99.8 7.7E-18 2.6E-22 135.5 14.4 130 68-246 8-143 (152)
57 3lwa_A Secreted thiol-disulfid 99.8 1.8E-17 6.3E-22 136.4 16.9 133 68-246 30-176 (183)
58 4fo5_A Thioredoxin-like protei 99.8 4.1E-18 1.4E-22 134.7 12.4 86 66-154 4-90 (143)
59 2obi_A PHGPX, GPX-4, phospholi 99.8 7.7E-18 2.6E-22 139.3 14.0 88 65-154 17-112 (183)
60 2f9s_A Thiol-disulfide oxidore 99.8 1.9E-17 6.7E-22 131.5 15.8 118 70-231 1-123 (151)
61 2lrn_A Thiol:disulfide interch 99.8 1.1E-17 3.8E-22 133.5 14.3 129 69-246 3-139 (152)
62 3fw2_A Thiol-disulfide oxidore 99.8 1.2E-17 4E-22 133.1 14.3 118 68-229 4-134 (150)
63 3hcz_A Possible thiol-disulfid 99.8 2.8E-18 9.5E-23 134.8 10.1 130 68-246 4-141 (148)
64 3eyt_A Uncharacterized protein 99.7 1.4E-17 4.9E-22 133.1 13.4 117 71-231 2-137 (158)
65 2l5o_A Putative thioredoxin; s 99.7 2.2E-17 7.6E-22 131.0 14.0 128 70-246 3-136 (153)
66 3kh7_A Thiol:disulfide interch 99.7 4E-17 1.4E-21 134.7 16.0 118 66-231 27-152 (176)
67 2p31_A CL683, glutathione pero 99.7 6.6E-18 2.2E-22 139.8 11.2 84 67-152 21-113 (181)
68 3erw_A Sporulation thiol-disul 99.7 5.7E-17 1.9E-21 126.6 15.8 130 67-246 7-144 (145)
69 3kij_A Probable glutathione pe 99.7 1.5E-17 5.2E-22 137.3 12.0 85 68-154 11-104 (180)
70 2cvb_A Probable thiol-disulfid 99.7 5.6E-17 1.9E-21 134.0 15.4 118 67-229 5-134 (188)
71 2gs3_A PHGPX, GPX-4, phospholi 99.7 3E-17 1E-21 136.3 13.7 86 67-154 21-114 (185)
72 3lor_A Thiol-disulfide isomera 99.7 2.1E-17 7.2E-22 132.1 12.0 118 70-231 4-140 (160)
73 2v1m_A Glutathione peroxidase; 99.7 5.2E-17 1.8E-21 130.9 14.1 85 68-154 4-97 (169)
74 3or5_A Thiol:disulfide interch 99.7 1.3E-16 4.4E-21 127.9 16.1 125 68-231 7-136 (165)
75 3fkf_A Thiol-disulfide oxidore 99.7 6.4E-17 2.2E-21 127.0 13.1 118 68-229 4-132 (148)
76 2ggt_A SCO1 protein homolog, m 99.7 1.8E-16 6E-21 127.2 14.3 136 74-246 2-156 (164)
77 2p5q_A Glutathione peroxidase 99.7 1.2E-16 4.1E-21 128.9 13.3 82 69-152 6-96 (170)
78 2lja_A Putative thiol-disulfid 99.7 6.4E-17 2.2E-21 128.2 11.4 132 69-246 3-141 (152)
79 3ia1_A THIO-disulfide isomeras 99.7 1.7E-16 5.8E-21 126.3 13.5 126 68-246 4-139 (154)
80 2vup_A Glutathione peroxidase- 99.7 6.9E-17 2.4E-21 134.6 11.2 84 68-153 21-113 (190)
81 2k6v_A Putative cytochrome C o 99.7 6.5E-17 2.2E-21 130.7 10.8 146 68-247 9-169 (172)
82 3raz_A Thioredoxin-related pro 99.7 1.7E-16 5.7E-21 126.5 11.6 128 74-246 4-138 (151)
83 2ls5_A Uncharacterized protein 99.5 1.8E-18 6.2E-23 138.9 0.0 134 68-246 6-146 (159)
84 2rli_A SCO2 protein homolog, m 99.7 7.1E-16 2.4E-20 124.7 15.2 134 76-246 7-159 (171)
85 2b7k_A SCO1 protein; metalloch 99.7 2.1E-16 7.2E-21 133.2 12.4 134 69-230 13-163 (200)
86 1lu4_A Soluble secreted antige 99.7 1.3E-15 4.5E-20 117.7 15.8 126 73-247 2-132 (136)
87 3dwv_A Glutathione peroxidase- 99.7 5.2E-17 1.8E-21 135.2 8.0 82 67-150 18-107 (187)
88 3ha9_A Uncharacterized thiored 99.7 1.4E-16 4.8E-21 128.6 10.3 95 68-167 10-128 (165)
89 2b5x_A YKUV protein, TRXY; thi 99.7 4.1E-16 1.4E-20 122.1 12.3 117 70-231 2-130 (148)
90 4evm_A Thioredoxin family prot 99.7 2E-15 6.7E-20 115.9 15.9 123 74-246 1-134 (138)
91 2r37_A Glutathione peroxidase 99.7 1.1E-15 3.6E-20 130.7 15.7 75 72-149 14-97 (207)
92 2i3y_A Epididymal secretory gl 99.7 1.2E-15 3.9E-20 131.5 15.9 76 71-149 31-115 (215)
93 2f8a_A Glutathione peroxidase 99.7 6.6E-16 2.2E-20 131.7 14.2 79 69-149 20-107 (208)
94 2b1k_A Thiol:disulfide interch 99.7 2.2E-15 7.4E-20 121.9 16.0 118 66-230 19-144 (168)
95 4hde_A SCO1/SENC family lipopr 99.7 1.8E-15 6.2E-20 124.7 15.2 81 70-152 7-94 (170)
96 1zzo_A RV1677; thioredoxin fol 99.6 6.8E-15 2.3E-19 113.3 16.1 92 72-167 2-99 (136)
97 1i5g_A Tryparedoxin II; electr 99.6 7.2E-16 2.5E-20 121.7 10.4 80 71-152 3-85 (144)
98 2hyx_A Protein DIPZ; thioredox 99.6 2.4E-15 8.4E-20 138.5 15.1 121 67-231 49-184 (352)
99 3cmi_A Peroxiredoxin HYR1; thi 99.6 1.6E-16 5.5E-21 129.7 6.3 82 71-155 8-100 (171)
100 1o8x_A Tryparedoxin, TRYX, TXN 99.6 8.8E-16 3E-20 121.6 8.8 80 70-152 3-85 (146)
101 2h30_A Thioredoxin, peptide me 99.6 2.5E-15 8.6E-20 120.4 11.2 129 67-246 12-151 (164)
102 1kng_A Thiol:disulfide interch 99.6 2.5E-15 8.4E-20 119.3 10.8 119 66-231 5-137 (156)
103 1o73_A Tryparedoxin; electron 99.6 9.2E-15 3.2E-19 114.9 10.0 80 70-152 3-85 (144)
104 2lus_A Thioredoxion; CR-Trp16, 99.3 2.2E-16 7.4E-21 123.7 0.0 81 73-153 2-85 (143)
105 3s9f_A Tryparedoxin; thioredox 99.6 3.7E-15 1.3E-19 121.7 6.4 81 69-152 22-105 (165)
106 4h86_A Peroxiredoxin type-2; o 99.3 1.4E-10 4.6E-15 98.9 14.8 147 66-246 23-199 (199)
107 2l57_A Uncharacterized protein 98.7 4.6E-08 1.6E-12 75.0 8.8 64 73-139 4-67 (126)
108 2ju5_A Thioredoxin disulfide i 98.6 1.9E-08 6.4E-13 80.8 4.2 76 61-141 16-94 (154)
109 3fk8_A Disulphide isomerase; A 98.4 1.4E-06 4.7E-11 67.2 9.0 43 97-140 29-73 (133)
110 2fwh_A Thiol:disulfide interch 98.3 1.4E-07 4.8E-12 73.6 0.4 89 69-161 4-104 (134)
111 2pu9_C TRX-F, thioredoxin F-ty 98.2 1.2E-05 4E-10 59.8 9.9 41 97-139 24-64 (111)
112 3ul3_B Thioredoxin, thioredoxi 98.1 4.5E-06 1.5E-10 64.2 6.2 66 70-140 19-84 (128)
113 1faa_A Thioredoxin F; electron 98.1 2E-05 6.8E-10 59.7 9.5 41 97-139 37-77 (124)
114 3hxs_A Thioredoxin, TRXP; elec 98.1 2.1E-06 7.3E-11 66.6 3.9 79 80-161 36-118 (141)
115 2kuc_A Putative disulphide-iso 98.0 2.5E-05 8.7E-10 59.5 9.2 42 97-139 27-71 (130)
116 2dj1_A Protein disulfide-isome 98.0 5.6E-06 1.9E-10 64.0 5.1 60 80-141 19-80 (140)
117 3p2a_A Thioredoxin 2, putative 98.0 5.3E-06 1.8E-10 65.3 4.3 70 70-142 30-99 (148)
118 1sen_A Thioredoxin-like protei 98.0 5.4E-07 1.8E-11 73.2 -1.7 64 73-140 25-88 (164)
119 2f51_A Thioredoxin; electron t 97.9 3.1E-06 1.1E-10 64.5 2.3 60 80-141 5-65 (118)
120 3d22_A TRXH4, thioredoxin H-ty 97.9 8E-05 2.7E-09 57.5 9.3 42 97-140 46-87 (139)
121 2dml_A Protein disulfide-isome 97.8 3.1E-05 1.1E-09 59.0 6.2 48 95-143 33-80 (130)
122 1x5e_A Thioredoxin domain cont 97.8 3.4E-05 1.2E-09 58.6 6.2 49 92-142 19-67 (126)
123 1nsw_A Thioredoxin, TRX; therm 97.8 1.7E-05 6E-10 57.9 4.0 48 92-140 12-59 (105)
124 3f3q_A Thioredoxin-1; His TAG, 97.8 1.8E-05 6.2E-10 59.1 4.1 49 90-140 17-65 (109)
125 2j23_A Thioredoxin; immune pro 97.7 1.4E-05 4.6E-10 60.9 3.0 49 93-141 29-77 (121)
126 4euy_A Uncharacterized protein 97.7 4.1E-05 1.4E-09 56.4 5.5 50 90-141 11-60 (105)
127 1t00_A Thioredoxin, TRX; redox 97.7 6.7E-05 2.3E-09 55.5 6.4 44 96-140 22-65 (112)
128 3d6i_A Monothiol glutaredoxin- 97.7 5.8E-05 2E-09 55.9 6.0 45 97-141 21-65 (112)
129 2dj3_A Protein disulfide-isome 97.7 6.9E-05 2.3E-09 57.2 6.4 63 77-140 6-69 (133)
130 2yzu_A Thioredoxin; redox prot 97.7 3.1E-05 1.1E-09 56.4 3.7 45 95-140 16-60 (109)
131 3qfa_C Thioredoxin; protein-pr 97.7 6.3E-05 2.1E-09 56.8 5.5 44 96-141 30-73 (116)
132 1fb6_A Thioredoxin M; electron 97.6 6.9E-05 2.4E-09 54.4 5.5 43 97-140 18-60 (105)
133 1syr_A Thioredoxin; SGPP, stru 97.6 2.9E-05 1E-09 57.9 3.5 47 93-141 22-68 (112)
134 1dby_A Chloroplast thioredoxin 97.6 0.00012 4.2E-09 53.4 6.7 44 96-140 18-61 (107)
135 3die_A Thioredoxin, TRX; elect 97.6 0.0001 3.6E-09 53.5 6.2 44 97-141 19-62 (106)
136 1ep7_A Thioredoxin CH1, H-type 97.6 0.0001 3.6E-09 54.3 6.3 43 97-140 24-66 (112)
137 2i4a_A Thioredoxin; acidophIle 97.6 0.00012 4.1E-09 53.3 6.5 44 96-140 19-62 (107)
138 1x5d_A Protein disulfide-isome 97.6 0.00012 4E-09 55.7 6.7 47 96-142 24-73 (133)
139 2vlu_A Thioredoxin, thioredoxi 97.6 1.2E-05 4.1E-10 60.7 0.9 68 71-140 8-75 (122)
140 1xfl_A Thioredoxin H1; AT3G510 97.6 0.0001 3.5E-09 56.4 6.2 42 97-140 38-79 (124)
141 2djj_A PDI, protein disulfide- 97.6 0.00012 4.2E-09 54.8 6.6 60 80-140 9-72 (121)
142 2vim_A Thioredoxin, TRX; thior 97.6 0.00012 4.1E-09 53.0 6.2 43 97-141 19-61 (104)
143 1w4v_A Thioredoxin, mitochondr 97.6 0.00014 4.6E-09 55.0 6.6 44 96-140 30-73 (119)
144 2oe3_A Thioredoxin-3; electron 97.6 2.8E-05 9.6E-10 58.8 2.7 44 95-140 28-71 (114)
145 3aps_A DNAJ homolog subfamily 97.6 0.00015 5.1E-09 54.5 6.8 71 95-166 19-93 (122)
146 2e0q_A Thioredoxin; electron t 97.6 0.00015 5.3E-09 52.1 6.3 43 96-140 15-57 (104)
147 1ti3_A Thioredoxin H, PTTRXH1; 97.6 0.00017 5.7E-09 53.1 6.5 43 97-141 26-68 (113)
148 3tco_A Thioredoxin (TRXA-1); d 97.5 4.7E-05 1.6E-09 55.6 3.4 45 96-141 20-64 (109)
149 3idv_A Protein disulfide-isome 97.5 7.8E-05 2.7E-09 62.5 5.1 52 92-143 27-80 (241)
150 2voc_A Thioredoxin; electron t 97.5 8.1E-05 2.8E-09 55.5 4.7 44 96-140 16-59 (112)
151 3gix_A Thioredoxin-like protei 97.5 0.0001 3.5E-09 58.6 5.5 48 96-144 22-69 (149)
152 1thx_A Thioredoxin, thioredoxi 97.5 0.00016 5.5E-09 53.3 6.2 45 96-141 24-68 (115)
153 1xwb_A Thioredoxin; dimerizati 97.5 0.00021 7.1E-09 51.9 6.6 44 96-140 19-62 (106)
154 2l5l_A Thioredoxin; structural 97.5 0.00017 5.7E-09 55.8 6.4 64 97-161 38-105 (136)
155 1z6n_A Hypothetical protein PA 97.5 6.6E-05 2.3E-09 61.5 4.2 42 97-140 54-95 (167)
156 2trx_A Thioredoxin; electron t 97.5 0.00017 5.9E-09 52.7 6.1 45 95-140 18-62 (108)
157 3m9j_A Thioredoxin; oxidoreduc 97.5 0.00016 5.4E-09 52.5 5.7 43 97-141 20-62 (105)
158 1gh2_A Thioredoxin-like protei 97.5 0.00021 7.2E-09 52.5 6.4 44 96-141 20-63 (107)
159 2ppt_A Thioredoxin-2; thiredox 97.5 4.8E-05 1.6E-09 60.9 2.7 49 92-141 59-107 (155)
160 2vm1_A Thioredoxin, thioredoxi 97.5 0.00019 6.4E-09 53.3 5.8 42 97-140 28-69 (118)
161 3h79_A Thioredoxin-like protei 97.4 0.00033 1.1E-08 53.3 7.2 46 96-141 32-81 (127)
162 1v98_A Thioredoxin; oxidoreduc 97.4 0.00025 8.4E-09 55.0 6.5 44 96-141 50-93 (140)
163 2xc2_A Thioredoxinn; oxidoredu 97.4 0.0002 7E-09 53.5 5.7 42 96-140 32-73 (117)
164 3gnj_A Thioredoxin domain prot 97.4 0.00029 9.9E-09 51.6 6.4 45 96-141 21-65 (111)
165 3f9u_A Putative exported cytoc 97.4 7.4E-05 2.5E-09 60.0 3.2 46 96-142 46-94 (172)
166 2i1u_A Thioredoxin, TRX, MPT46 97.4 0.00033 1.1E-08 52.3 6.4 45 96-141 29-73 (121)
167 2yj7_A LPBCA thioredoxin; oxid 96.5 2.5E-05 8.7E-10 56.5 0.0 44 96-140 18-61 (106)
168 3uvt_A Thioredoxin domain-cont 97.4 0.00022 7.4E-09 52.2 5.1 45 97-141 21-67 (111)
169 2dj0_A Thioredoxin-related tra 97.4 0.00011 3.9E-09 56.8 3.6 44 98-141 27-70 (137)
170 2o8v_B Thioredoxin 1; disulfid 97.4 0.00014 4.7E-09 56.1 4.0 45 95-140 38-82 (128)
171 3hz4_A Thioredoxin; NYSGXRC, P 97.4 0.0003 1E-08 54.7 6.0 47 96-143 23-69 (140)
172 3qou_A Protein YBBN; thioredox 97.3 7.9E-05 2.7E-09 64.7 2.5 45 97-142 26-70 (287)
173 1zma_A Bacterocin transport ac 97.3 0.00016 5.4E-09 54.3 3.8 43 96-141 28-70 (118)
174 2wz9_A Glutaredoxin-3; protein 97.3 0.00044 1.5E-08 54.7 6.3 44 97-142 32-75 (153)
175 3cxg_A Putative thioredoxin; m 97.3 0.00029 1E-08 54.6 5.1 41 97-140 40-80 (133)
176 1r26_A Thioredoxin; redox-acti 97.3 0.00038 1.3E-08 53.5 5.7 46 94-141 34-79 (125)
177 3q6o_A Sulfhydryl oxidase 1; p 97.2 0.00057 1.9E-08 58.1 7.0 44 96-139 29-74 (244)
178 3emx_A Thioredoxin; structural 97.2 0.00031 1.1E-08 54.4 4.7 40 99-141 33-72 (135)
179 3zzx_A Thioredoxin; oxidoreduc 97.2 0.00072 2.5E-08 50.7 6.2 41 97-139 20-60 (105)
180 1qgv_A Spliceosomal protein U5 97.2 0.00061 2.1E-08 53.6 6.0 44 97-141 23-66 (142)
181 2l6c_A Thioredoxin; oxidoreduc 97.2 0.00023 7.8E-09 53.0 3.2 43 96-140 18-60 (110)
182 3dxb_A Thioredoxin N-terminall 97.1 0.00031 1.1E-08 59.1 4.3 48 94-142 27-74 (222)
183 3apq_A DNAJ homolog subfamily 97.1 0.0001 3.4E-09 61.5 1.2 46 96-142 113-158 (210)
184 1wou_A Thioredoxin -related pr 97.1 0.00069 2.4E-08 51.5 5.2 61 97-168 24-91 (123)
185 1mek_A Protein disulfide isome 97.0 8.1E-05 2.8E-09 55.1 -0.4 47 94-140 21-69 (120)
186 3ira_A Conserved protein; meth 97.0 0.0032 1.1E-07 52.0 9.2 36 211-247 105-143 (173)
187 1a8l_A Protein disulfide oxido 96.9 0.0017 5.9E-08 53.9 6.4 45 96-140 133-180 (226)
188 1fo5_A Thioredoxin; disulfide 96.8 0.0003 1E-08 49.1 1.3 42 98-140 3-44 (85)
189 3ed3_A Protein disulfide-isome 96.8 0.0015 5.3E-08 57.8 6.2 44 96-140 34-77 (298)
190 3gyk_A 27KDA outer membrane pr 96.8 0.002 6.9E-08 51.6 6.0 49 85-137 12-60 (175)
191 1wmj_A Thioredoxin H-type; str 96.8 0.0002 6.9E-09 54.1 -0.1 44 97-142 36-79 (130)
192 2b5e_A Protein disulfide-isome 96.8 0.0011 3.7E-08 62.3 4.9 51 93-143 27-77 (504)
193 2dbc_A PDCL2, unnamed protein 96.7 0.0023 7.9E-08 49.6 5.8 42 98-141 31-72 (135)
194 1nho_A Probable thioredoxin; b 96.7 0.00046 1.6E-08 48.1 1.4 41 99-140 3-43 (85)
195 2hls_A Protein disulfide oxido 96.6 0.0042 1.4E-07 53.3 6.8 47 96-142 137-186 (243)
196 3idv_A Protein disulfide-isome 96.6 0.00081 2.8E-08 56.2 2.2 49 93-141 143-193 (241)
197 1eej_A Thiol:disulfide interch 96.5 0.003 1E-07 53.1 5.5 38 96-137 85-122 (216)
198 2lst_A Thioredoxin; structural 95.5 0.00046 1.6E-08 52.4 0.0 52 85-139 9-63 (130)
199 3qcp_A QSOX from trypanosoma b 96.4 0.0051 1.7E-07 58.4 7.1 45 98-142 43-94 (470)
200 1sji_A Calsequestrin 2, calseq 96.4 0.0012 4.1E-08 59.3 2.4 50 93-143 24-80 (350)
201 2ywm_A Glutaredoxin-like prote 96.4 0.0042 1.4E-07 51.8 5.6 44 96-141 135-178 (229)
202 1ilo_A Conserved hypothetical 96.4 0.0048 1.6E-07 42.2 5.0 36 101-137 3-38 (77)
203 2av4_A Thioredoxin-like protei 96.4 0.0053 1.8E-07 50.2 6.0 45 96-141 40-84 (160)
204 3t58_A Sulfhydryl oxidase 1; o 96.3 0.0071 2.4E-07 57.9 7.3 46 95-140 28-75 (519)
205 2r2j_A Thioredoxin domain-cont 96.2 0.0056 1.9E-07 55.6 6.0 61 80-142 7-72 (382)
206 3f8u_A Protein disulfide-isome 96.1 0.0036 1.2E-07 58.2 3.9 45 98-143 22-66 (481)
207 3f8u_A Protein disulfide-isome 95.9 0.0086 3E-07 55.6 5.5 44 97-140 370-414 (481)
208 3ph9_A Anterior gradient prote 95.8 0.0049 1.7E-07 49.5 2.9 71 97-168 44-121 (151)
209 3uem_A Protein disulfide-isome 95.8 0.013 4.6E-07 52.2 6.0 46 95-140 265-311 (361)
210 2es7_A Q8ZP25_salty, putative 95.7 0.0031 1.1E-07 49.9 1.5 50 90-141 27-80 (142)
211 3hd5_A Thiol:disulfide interch 95.7 0.026 8.9E-07 45.9 7.1 43 96-139 24-66 (195)
212 1a0r_P Phosducin, MEKA, PP33; 95.7 0.011 3.7E-07 51.3 5.0 41 97-139 133-173 (245)
213 1oaz_A Thioredoxin 1; immune s 95.7 0.0035 1.2E-07 47.7 1.6 45 95-140 19-77 (123)
214 3apo_A DNAJ homolog subfamily 95.6 0.019 6.3E-07 56.8 6.8 47 96-143 674-720 (780)
215 3apo_A DNAJ homolog subfamily 95.5 0.017 5.7E-07 57.1 6.3 57 97-154 455-511 (780)
216 2e7p_A Glutaredoxin; thioredox 95.4 0.0055 1.9E-07 45.5 1.8 28 93-122 16-43 (116)
217 3iv4_A Putative oxidoreductase 95.3 0.0095 3.2E-07 45.9 3.0 46 92-140 19-64 (112)
218 3h93_A Thiol:disulfide interch 95.3 0.041 1.4E-06 44.6 6.9 41 96-137 24-64 (192)
219 3evi_A Phosducin-like protein 95.2 0.026 8.9E-07 43.2 5.2 40 99-140 25-64 (118)
220 1z6m_A Conserved hypothetical 95.2 0.045 1.5E-06 43.6 6.7 50 87-138 19-69 (175)
221 1a8l_A Protein disulfide oxido 95.1 0.039 1.3E-06 45.5 6.3 43 96-140 21-64 (226)
222 2trc_P Phosducin, MEKA, PP33; 95.0 0.021 7.2E-07 48.3 4.5 40 98-139 121-160 (217)
223 3ga4_A Dolichyl-diphosphooligo 95.0 0.067 2.3E-06 44.2 7.4 44 98-141 38-92 (178)
224 2b5e_A Protein disulfide-isome 94.9 0.017 5.7E-07 54.2 4.0 43 97-139 376-420 (504)
225 2ywm_A Glutaredoxin-like prote 94.9 0.042 1.4E-06 45.6 5.9 46 96-141 20-70 (229)
226 1h75_A Glutaredoxin-like prote 94.9 0.051 1.8E-06 37.5 5.5 39 101-146 3-41 (81)
227 2qgv_A Hydrogenase-1 operon pr 94.7 0.019 6.7E-07 45.8 3.2 43 96-139 34-78 (140)
228 1t3b_A Thiol:disulfide interch 94.7 0.033 1.1E-06 46.5 4.7 38 96-137 85-122 (211)
229 3kp8_A Vkorc1/thioredoxin doma 94.6 0.021 7.1E-07 42.7 3.0 29 98-126 13-41 (106)
230 2znm_A Thiol:disulfide interch 94.5 0.017 5.7E-07 46.9 2.6 42 96-138 21-62 (195)
231 2k8s_A Thioredoxin; dimer, str 94.5 0.057 1.9E-06 37.5 5.0 36 101-139 4-39 (80)
232 1r7h_A NRDH-redoxin; thioredox 94.5 0.079 2.7E-06 35.7 5.6 39 101-146 3-41 (75)
233 3us3_A Calsequestrin-1; calciu 94.4 0.062 2.1E-06 48.5 6.4 50 95-144 28-83 (367)
234 1wjk_A C330018D20RIK protein; 94.4 0.044 1.5E-06 40.3 4.3 49 85-139 4-52 (100)
235 2fgx_A Putative thioredoxin; N 94.1 0.067 2.3E-06 40.5 5.0 38 99-139 30-67 (107)
236 2qsi_A Putative hydrogenase ex 93.6 0.12 4.1E-06 41.0 5.8 42 99-141 35-78 (137)
237 1ego_A Glutaredoxin; electron 93.6 0.1 3.5E-06 36.1 4.8 37 101-139 3-39 (85)
238 3ihg_A RDME; flavoenzyme, anth 93.5 0.24 8.3E-06 46.5 8.8 36 66-102 417-452 (535)
239 3l78_A Regulatory protein SPX; 93.3 0.25 8.6E-06 37.7 7.0 62 101-169 2-71 (120)
240 1pn0_A Phenol 2-monooxygenase; 93.2 0.88 3E-05 44.4 12.4 75 67-141 477-567 (665)
241 1v58_A Thiol:disulfide interch 92.9 0.13 4.5E-06 43.7 5.4 46 87-137 89-134 (241)
242 3dml_A Putative uncharacterize 92.7 0.068 2.3E-06 41.2 3.0 42 98-139 19-61 (116)
243 3rdw_A Putative arsenate reduc 92.7 0.29 1E-05 37.5 6.6 62 101-169 7-77 (121)
244 3fz4_A Putative arsenate reduc 92.5 0.28 9.5E-06 37.6 6.2 63 100-169 4-74 (120)
245 2rem_A Disulfide oxidoreductas 92.5 0.13 4.6E-06 41.3 4.6 41 96-137 24-64 (193)
246 3l9v_A Putative thiol-disulfid 92.3 0.088 3E-06 43.0 3.4 42 96-139 14-58 (189)
247 3gkx_A Putative ARSC family re 92.3 0.25 8.4E-06 37.9 5.7 62 101-169 6-75 (120)
248 3f0i_A Arsenate reductase; str 92.2 0.35 1.2E-05 37.0 6.4 62 101-169 6-76 (119)
249 3hz8_A Thiol:disulfide interch 91.9 0.15 5.1E-06 41.7 4.3 41 96-137 23-63 (193)
250 2klx_A Glutaredoxin; thioredox 91.8 0.35 1.2E-05 33.9 5.7 43 101-151 8-50 (89)
251 1hyu_A AHPF, alkyl hydroperoxi 91.2 0.27 9.3E-06 46.4 5.8 43 97-141 117-159 (521)
252 1s3c_A Arsenate reductase; ARS 90.7 0.52 1.8E-05 37.2 6.2 63 101-170 4-74 (141)
253 1wik_A Thioredoxin-like protei 90.7 0.68 2.3E-05 34.1 6.6 53 92-152 10-67 (109)
254 1z3e_A Regulatory protein SPX; 90.6 0.89 3.1E-05 35.0 7.4 62 101-169 3-72 (132)
255 1fov_A Glutaredoxin 3, GRX3; a 90.0 0.49 1.7E-05 32.2 5.0 44 101-151 3-47 (82)
256 3c1r_A Glutaredoxin-1; oxidize 89.9 0.41 1.4E-05 36.0 4.8 32 101-139 27-62 (118)
257 2hze_A Glutaredoxin-1; thiored 89.9 0.36 1.2E-05 35.9 4.5 32 101-139 21-55 (114)
258 2khp_A Glutaredoxin; thioredox 89.8 0.67 2.3E-05 32.5 5.7 44 101-151 8-52 (92)
259 3rhb_A ATGRXC5, glutaredoxin-C 89.6 0.45 1.5E-05 35.1 4.8 21 101-121 21-41 (113)
260 1kte_A Thioltransferase; redox 89.6 0.25 8.5E-06 35.7 3.2 21 101-121 14-34 (105)
261 1ttz_A Conserved hypothetical 89.5 0.26 8.9E-06 35.5 3.2 22 101-122 3-24 (87)
262 2dkh_A 3-hydroxybenzoate hydro 89.5 1.1 3.6E-05 43.5 8.5 36 68-103 466-504 (639)
263 2dlx_A UBX domain-containing p 89.4 0.96 3.3E-05 36.0 6.9 60 97-158 42-111 (153)
264 2kok_A Arsenate reductase; bru 89.0 0.97 3.3E-05 34.2 6.4 62 101-169 7-74 (120)
265 2lqo_A Putative glutaredoxin R 88.5 0.52 1.8E-05 34.4 4.3 34 101-141 6-39 (92)
266 3qmx_A Glutaredoxin A, glutare 88.1 0.76 2.6E-05 33.6 5.1 35 100-141 17-51 (99)
267 3uem_A Protein disulfide-isome 88.1 0.86 2.9E-05 40.2 6.3 42 97-139 135-176 (361)
268 3gv1_A Disulfide interchange p 88.0 0.63 2.1E-05 36.8 4.8 36 95-136 12-47 (147)
269 1aba_A Glutaredoxin; electron 87.4 1.9 6.4E-05 30.1 6.7 32 101-139 2-37 (87)
270 2yan_A Glutaredoxin-3; oxidore 87.2 0.67 2.3E-05 33.8 4.3 39 93-139 13-55 (105)
271 1rw1_A Conserved hypothetical 86.6 0.53 1.8E-05 35.4 3.5 62 101-169 2-69 (114)
272 3ctg_A Glutaredoxin-2; reduced 86.6 0.91 3.1E-05 34.9 4.9 19 101-119 39-58 (129)
273 2cq9_A GLRX2 protein, glutared 86.6 1.1 3.7E-05 34.2 5.4 36 96-140 26-61 (130)
274 1un2_A DSBA, thiol-disulfide i 85.7 0.21 7.1E-06 41.4 0.8 40 99-139 115-157 (197)
275 3gn3_A Putative protein-disulf 85.3 0.65 2.2E-05 37.8 3.7 43 95-137 12-54 (182)
276 3ic4_A Glutaredoxin (GRX-1); s 85.3 1.1 3.7E-05 31.4 4.4 21 101-121 14-34 (92)
277 3nzn_A Glutaredoxin; structura 84.9 0.63 2.1E-05 33.9 3.1 21 101-121 24-44 (103)
278 2wci_A Glutaredoxin-4; redox-a 84.9 1.5 5.1E-05 34.2 5.4 46 100-152 37-87 (135)
279 4dvc_A Thiol:disulfide interch 83.5 2.3 7.7E-05 33.2 6.1 40 96-137 21-60 (184)
280 2ht9_A Glutaredoxin-2; thiored 83.1 1.6 5.5E-05 34.2 5.0 28 92-121 44-71 (146)
281 3h8q_A Thioredoxin reductase 3 82.9 2.7 9.2E-05 31.1 5.9 35 96-139 16-50 (114)
282 3msz_A Glutaredoxin 1; alpha-b 82.2 1.1 3.7E-05 30.8 3.3 20 100-119 5-24 (89)
283 2djk_A PDI, protein disulfide- 81.9 1.1 3.7E-05 33.9 3.5 43 98-142 24-66 (133)
284 3feu_A Putative lipoprotein; a 81.7 0.7 2.4E-05 37.4 2.4 36 97-136 23-58 (185)
285 3gx8_A Monothiol glutaredoxin- 80.2 3.4 0.00012 31.2 5.7 42 99-147 17-65 (121)
286 3kp9_A Vkorc1/thioredoxin doma 80.1 0.5 1.7E-05 41.9 1.0 38 87-126 189-226 (291)
287 1t1v_A SH3BGRL3, SH3 domain-bi 80.0 2.6 9E-05 29.8 4.8 35 101-141 4-43 (93)
288 2wem_A Glutaredoxin-related pr 78.8 3.3 0.00011 31.3 5.3 46 93-146 16-66 (118)
289 3bci_A Disulfide bond protein 78.4 2.7 9.3E-05 33.4 4.9 42 96-137 10-53 (186)
290 3ipz_A Monothiol glutaredoxin- 78.1 2.9 9.9E-05 30.8 4.6 39 93-139 14-56 (109)
291 2c0g_A ERP29 homolog, windbeut 77.9 2.5 8.4E-05 36.4 4.7 43 94-140 30-76 (248)
292 2ct6_A SH3 domain-binding glut 77.5 4.3 0.00015 30.0 5.5 49 101-150 10-59 (111)
293 3c7m_A Thiol:disulfide interch 77.3 3.3 0.00011 32.7 5.1 39 98-138 19-58 (195)
294 2hls_A Protein disulfide oxido 76.9 3.5 0.00012 34.7 5.4 45 97-141 26-75 (243)
295 3l9s_A Thiol:disulfide interch 75.5 1.7 5.7E-05 35.4 2.9 39 98-137 22-63 (191)
296 3tdg_A DSBG, putative uncharac 73.0 3 0.0001 36.6 4.1 39 97-138 147-185 (273)
297 3zyw_A Glutaredoxin-3; metal b 72.0 3.9 0.00013 30.4 4.0 40 92-139 11-54 (111)
298 3gmf_A Protein-disulfide isome 71.8 8 0.00027 31.8 6.2 49 87-137 7-57 (205)
299 2qc7_A ERP31, ERP28, endoplasm 69.6 3.9 0.00013 34.8 3.9 43 94-140 19-64 (240)
300 3gha_A Disulfide bond formatio 69.0 5.9 0.0002 32.3 4.8 43 96-138 28-72 (202)
301 3f4s_A Alpha-DSBA1, putative u 68.4 6.8 0.00023 32.8 5.1 48 88-137 32-81 (226)
302 1nm3_A Protein HI0572; hybrid, 64.9 5.7 0.0002 32.9 4.0 22 100-121 171-192 (241)
303 3l4n_A Monothiol glutaredoxin- 62.7 5.7 0.00019 30.4 3.2 54 92-149 9-63 (127)
304 2wul_A Glutaredoxin related pr 61.7 13 0.00045 28.2 5.2 50 92-149 15-69 (118)
305 4gxt_A A conserved functionall 53.4 11 0.00037 34.3 4.0 45 117-161 224-270 (385)
306 4as2_A Phosphorylcholine phosp 51.2 10 0.00034 33.8 3.3 45 117-161 146-192 (327)
307 2ec4_A FAS-associated factor 1 48.4 73 0.0025 25.5 7.9 48 95-142 53-102 (178)
308 2in3_A Hypothetical protein; D 47.9 32 0.0011 27.4 5.7 39 98-137 7-45 (216)
309 2p9j_A Hypothetical protein AQ 47.4 51 0.0018 24.7 6.6 35 120-154 42-76 (162)
310 1u6t_A SH3 domain-binding glut 47.1 31 0.0011 26.3 5.1 46 100-151 1-52 (121)
311 3ghf_A Septum site-determining 44.6 20 0.00069 27.2 3.7 39 117-155 61-99 (120)
312 4f9z_D Endoplasmic reticulum r 41.6 63 0.0021 26.2 6.6 43 97-140 131-173 (227)
313 2r0c_A REBC; flavin adenine di 41.2 1.6E+02 0.0056 27.2 10.3 32 68-103 449-480 (549)
314 2axo_A Hypothetical protein AT 41.0 70 0.0024 27.7 7.0 37 98-137 43-79 (270)
315 3fvv_A Uncharacterized protein 35.4 63 0.0022 25.4 5.6 35 120-154 98-132 (232)
316 3oj6_A Blasticidin-S deaminase 31.8 15 0.00052 29.5 1.1 40 107-155 110-149 (158)
317 3kzq_A Putative uncharacterize 31.6 64 0.0022 25.7 5.0 38 99-137 3-40 (208)
318 3hug_B Probable conserved memb 31.5 24 0.00081 26.6 2.1 23 107-129 52-74 (108)
319 3pe6_A Monoglyceride lipase; a 28.8 1E+02 0.0035 24.2 5.8 59 75-138 16-77 (303)
320 3f9u_A Putative exported cytoc 27.5 28 0.00095 26.7 2.0 32 210-246 130-161 (172)
321 2imf_A HCCA isomerase, 2-hydro 26.7 79 0.0027 25.0 4.7 34 101-137 3-36 (203)
322 3eoo_A Methylisocitrate lyase; 25.5 2E+02 0.0067 25.2 7.4 70 100-171 156-237 (298)
323 2r8e_A 3-deoxy-D-manno-octulos 25.5 80 0.0027 24.6 4.5 33 122-154 61-93 (188)
324 4ev1_A Anabena TIC22; TIC22 fo 25.4 90 0.0031 26.8 5.0 67 70-144 9-91 (252)
325 3hju_A Monoglyceride lipase; a 23.3 1.7E+02 0.0059 23.9 6.4 61 73-138 32-95 (342)
326 1m0f_B GPB, scaffolding protei 22.7 24 0.00081 24.1 0.6 28 103-133 22-49 (68)
327 4e6z_A Apicoplast TIC22, putat 22.6 36 0.0012 29.7 1.9 66 67-142 69-139 (279)
328 3dex_A SAV_2001; alpha-beta pr 22.4 33 0.0011 25.7 1.4 34 210-247 52-85 (107)
329 3mmz_A Putative HAD family hyd 22.3 88 0.003 24.1 4.1 66 77-155 13-80 (176)
330 2wm8_A MDP-1, magnesium-depend 21.7 1E+02 0.0035 23.7 4.4 36 119-154 73-109 (187)
331 1k1e_A Deoxy-D-mannose-octulos 21.5 95 0.0032 23.9 4.1 34 121-154 42-75 (180)
332 3n1u_A Hydrolase, HAD superfam 21.5 1.2E+02 0.0041 23.8 4.8 32 123-154 55-86 (191)
333 3e58_A Putative beta-phosphogl 21.5 1.4E+02 0.0047 22.4 5.1 35 119-153 94-128 (214)
334 2xry_A Deoxyribodipyrimidine p 21.2 1.9E+02 0.0064 26.6 6.7 56 114-169 89-156 (482)
335 2g84_A Cytidine and deoxycytid 21.0 92 0.0031 25.4 4.0 38 209-247 48-90 (197)
336 1nnl_A L-3-phosphoserine phosp 20.9 87 0.003 24.4 3.9 33 122-154 94-126 (225)
337 1r4w_A Glutathione S-transfera 20.8 71 0.0024 25.9 3.4 37 98-137 5-41 (226)
338 1zlp_A PSR132, petal death pro 20.4 2.3E+02 0.0078 25.0 6.8 56 116-171 188-255 (318)
339 2ze3_A DFA0005; organic waste 20.3 2.7E+02 0.0092 23.9 7.1 57 115-171 166-230 (275)
340 3ih1_A Methylisocitrate lyase; 20.1 2.5E+02 0.0087 24.5 7.0 56 116-171 174-241 (305)
No 1
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=99.96 E-value=9.2e-29 Score=201.99 Aligned_cols=148 Identities=14% Similarity=0.144 Sum_probs=124.6
Q ss_pred ccccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCCHHHHHHHH
Q 025756 69 EDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFS 148 (248)
Q Consensus 69 ~~~g~~ap~f~L~d~~G~~v~l~~l~~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~~~~~~~f~ 148 (248)
+++|++||+|+|.|.+|+.++|+++. ++++||.|+++.|||+|+.++.+|.+.++++++.|+.+|+|+.|+++.+++|+
T Consensus 4 l~vG~~aPdF~l~~~~G~~~~l~d~~-Gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~~~~~~~~v~vs~d~~~~~~~~~ 82 (157)
T 4g2e_A 4 VEIGELAPDFELPDTELKKVKLSALK-GKVVVLAFYPAAFTQVCTKEMCTFRDSMAKFNQVNAVVLGISVDPPFSNKAFK 82 (157)
T ss_dssp CCTTSBCCCCEEEBTTSCEEEGGGGT-TSCEEEEECSCTTCCC------CCSCGGGGGGGCSSEEEEEESSCHHHHHHHH
T ss_pred CCCCCCCcCeEeECCCCCEEeHHHHC-CCeEEEEecCCCCCCccccchhhcccccccccccCceEeeecccchhHHHHHH
Confidence 68999999999999999999999974 56788888889999999999999999999999999999999999999999999
Q ss_pred hhcCCCC----CCChHHHHHcCCccccccccCchhhHHHHHHHHhhhhhhccccccccccCCCceeeceEEEEeCCCCeE
Q 025756 149 EQTKFKG----DPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGPGKSNI 224 (248)
Q Consensus 149 ~~~~fp~----Dp~~~~y~alGl~~~~~~~~~P~a~~~~~k~~~~g~~~~~~~~~~g~~~~~~~~qlgG~fVvd~gg~~I 224 (248)
+++++++ |+++++.++||+...... +.+.....|++||||++| +|
T Consensus 83 ~~~~~~~p~l~D~~~~v~~~ygv~~~~~~------------------------------~~~~~~~~p~tflID~~G-~I 131 (157)
T 4g2e_A 83 EHNKLNFTILSDYNREVVKKYNVAWEFPA------------------------------LPGYVLAKRAVFVIDKEG-KV 131 (157)
T ss_dssp HHTTCCSEEEECTTSHHHHHTTCEEECTT------------------------------STTCEEECEEEEEECTTS-BE
T ss_pred HHcCCcEEEEEcCCcHHHHHcCCcccccc------------------------------CCCcceeeeeEEEECCCC-EE
Confidence 9887555 999999999998754210 011225678999999998 99
Q ss_pred EEEEeCCCCCCCCCHHHHHHHhhC
Q 025756 225 SYIHRDKEAGDDPDIQDILKACCS 248 (248)
Q Consensus 225 ~~~h~~~~~~Dh~~i~eIL~al~~ 248 (248)
+|.|++.++.+++++++|++++++
T Consensus 132 ~~~~~~~~~~~~~~~~eil~~l~~ 155 (157)
T 4g2e_A 132 RYKWVSDDPTKEPPYDEIEKVVKS 155 (157)
T ss_dssp EEEEEESSTTCCCCHHHHHHHHHH
T ss_pred EEEEECCCCCCCCCHHHHHHHHHH
Confidence 999999999999999999998863
No 2
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=99.96 E-value=1.3e-29 Score=209.02 Aligned_cols=148 Identities=12% Similarity=0.203 Sum_probs=130.3
Q ss_pred CccccCcCCCcEEecCCCCeEeCCCcc-CCCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCCHHHHHH
Q 025756 68 SEDTKNLLDTVKVYDVNGNAIPISDLW-KDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQART 146 (248)
Q Consensus 68 ~~~~g~~ap~f~L~d~~G~~v~l~~l~-~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~~~~~~~ 146 (248)
-.++|++||+|+|.|.+|+.++|+++. +++++||+|||+.|||+|+.++..|++.+++|++.|+.+|+|+.|+++.+++
T Consensus 4 ml~vG~~aPdF~l~~~~G~~v~Lsd~~~~Gk~vvl~f~~~~~cp~C~~e~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~ 83 (164)
T 4gqc_A 4 LVELGEKAPDFTLPNQDFEPVNLYEVLKRGRPAVLIFFPAAFSPVCTKELCTFRDKMAQLEKANAEVLAISVDSPWCLKK 83 (164)
T ss_dssp CCCTTSBCCCCEEEBTTSCEEEHHHHHHTSSCEEEEECSCTTCCEECSSCEESCCCGGGGGGSSSEEEEEESSCHHHHHH
T ss_pred cccCCCCCcCcEeECCCCCEEEHHHHhcCCCEEEEEEeCCCCCCCcccchhhhhhhHHHhhccCceEEEecCCCHHHHHH
Confidence 368999999999999999999999986 4568999999999999999999999999999999999999999999999999
Q ss_pred HHhhcCCCC----CCChHHHHHcCCccccccccCchhhHHHHHHHHhhhhhhccccccccccCCCceeeceEEEEeCCCC
Q 025756 147 FSEQTKFKG----DPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGPGKS 222 (248)
Q Consensus 147 f~~~~~fp~----Dp~~~~y~alGl~~~~~~~~~P~a~~~~~k~~~~g~~~~~~~~~~g~~~~~~~~qlgG~fVvd~gg~ 222 (248)
|++++++++ |++.++.++||+..... .+ .. ....|++||||++|
T Consensus 84 ~~~~~~~~fp~l~D~~~~v~~~ygv~~~~~----------------~~--------~~-------~~~~p~tflID~~G- 131 (164)
T 4gqc_A 84 FKDENRLAFNLLSDYNREVIKLYNVYHEDL----------------KG--------LK-------MVAKRAVFIVKPDG- 131 (164)
T ss_dssp HHHHTTCCSEEEECTTSHHHHHTTCEEEEE----------------TT--------EE-------EEECCEEEEECTTS-
T ss_pred HHHhcCcccceeecCchHHHHHcCCccccc----------------cc--------Cc-------CCeeeEEEEECCCC-
Confidence 999887555 99999999999864321 00 00 14567999999998
Q ss_pred eEEEEEeCCCCCCCCCHHHHHHHhh
Q 025756 223 NISYIHRDKEAGDDPDIQDILKACC 247 (248)
Q Consensus 223 ~I~~~h~~~~~~Dh~~i~eIL~al~ 247 (248)
+|+|.|+..++.++++++++|++++
T Consensus 132 ~I~~~~~~~~~~~~~~~~eil~~l~ 156 (164)
T 4gqc_A 132 TVAYKWVTDNPLNEPDYDEVVREAN 156 (164)
T ss_dssp BEEEEEECSCTTCCCCHHHHHHHHH
T ss_pred EEEEEEEeCCCCCCCCHHHHHHHHH
Confidence 9999999999999999999999875
No 3
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=99.94 E-value=5.8e-26 Score=189.73 Aligned_cols=151 Identities=13% Similarity=0.141 Sum_probs=127.5
Q ss_pred CCCccccCcCCCcEEe-cCCCCeEeCCCccCCCeEEEEEEcCCCChhhH-HHHHHHHhcHHHHHHCCCEEEE-EeCCCHH
Q 025756 66 SVSEDTKNLLDTVKVY-DVNGNAIPISDLWKDRKAVVAFARHFGCVLCR-KRADYLAAKKDVMDASGVALVL-IGPGSVE 142 (248)
Q Consensus 66 ~~~~~~g~~ap~f~L~-d~~G~~v~l~~l~~~~~vvlvF~R~~~Cp~C~-~~l~~L~~~~~~l~~~Gv~vV~-Is~~~~~ 142 (248)
.++.++|++||+|+|. |.+|+.++|+++++++++||+|||+.|||.|+ +|+.+|++.+++|++.|++||+ |+.++++
T Consensus 12 ~~~~~vG~~aPdf~l~~~~~g~~v~L~d~~~gk~vvL~f~pa~wcp~C~~~e~p~l~~~~~~~~~~gv~vv~~iS~D~~~ 91 (173)
T 3mng_A 12 SAPIKVGDAIPAVEVFEGEPGNKVNLAELFKGKKGVLFGVPGAFTPGCSKTHLPGFVEQAEALKAKGVQVVACLSVNDAF 91 (173)
T ss_dssp -CCCCTTCBCCCCEEECSSTTCEEEHHHHTTTSEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTTCCEEEEEESSCHH
T ss_pred CCCCCCCCCCCCeEeeeCCCCCEEEhHHHhCCCcEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEEcCCCHH
Confidence 4567999999999999 99999999999877788999999999999999 5999999999999999999997 9999999
Q ss_pred HHHHHHhhcCCC--C----CCChHHHHHcCCccccccccCchhhHHHHHHHHhhhhhhccccccccccCCCceeeceEEE
Q 025756 143 QARTFSEQTKFK--G----DPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIV 216 (248)
Q Consensus 143 ~~~~f~~~~~fp--~----Dp~~~~y~alGl~~~~~~~~~P~a~~~~~k~~~~g~~~~~~~~~~g~~~~~~~~qlgG~fV 216 (248)
.+++|+++++++ + |++.++.++||+...... .. .. ++....+++||
T Consensus 92 ~~~~f~~~~~~~~~fp~l~D~~~~va~~yGv~~~~~~-------~~----~~-----------------g~~~~~r~tfv 143 (173)
T 3mng_A 92 VTGEWGRAHKAEGKVRLLADPTGAFGKETDLLLDDSL-------VS----IF-----------------GNRRLKRFSMV 143 (173)
T ss_dssp HHHHHHHHTTCTTTCEEEECTTCHHHHHHTCBCCSTT-------HH----HH-----------------SSCCBCCEEEE
T ss_pred HHHHHHHHhCCCCceEEEECCChHHHHHhCCCccccc-------cc----cc-----------------CCcceEEEEEE
Confidence 999999987654 4 999999999999854210 00 00 11135689999
Q ss_pred EeCCCCeEEEEEeCCCC--CCCCCHHHHHHHh
Q 025756 217 AGPGKSNISYIHRDKEA--GDDPDIQDILKAC 246 (248)
Q Consensus 217 vd~gg~~I~~~h~~~~~--~Dh~~i~eIL~al 246 (248)
|| +| +|+|.|++.++ .+..++++||++|
T Consensus 144 ID-dG-~I~~~~v~~~~~g~~~~~~~~vl~~l 173 (173)
T 3mng_A 144 VQ-DG-IVKALNVEPDGTGLTCSLAPNIISQL 173 (173)
T ss_dssp EE-TT-EEEEEEECTTSSCSSTTSHHHHHHHC
T ss_pred EE-CC-EEEEEEEeCCCCCcchHHHHHHHHhC
Confidence 99 97 99999999775 4678899999875
No 4
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=99.93 E-value=4.7e-25 Score=185.90 Aligned_cols=147 Identities=11% Similarity=0.114 Sum_probs=126.7
Q ss_pred CccccCcCCCcEEecC--CC-CeEeCCCccCCCeEEEEEEcCCCChhhHH-HHHHHHhcHHHHHHCCCE-EEEEeCCCHH
Q 025756 68 SEDTKNLLDTVKVYDV--NG-NAIPISDLWKDRKAVVAFARHFGCVLCRK-RADYLAAKKDVMDASGVA-LVLIGPGSVE 142 (248)
Q Consensus 68 ~~~~g~~ap~f~L~d~--~G-~~v~l~~l~~~~~vvlvF~R~~~Cp~C~~-~l~~L~~~~~~l~~~Gv~-vV~Is~~~~~ 142 (248)
..++|+++|+|++.+. +| +.++|+++++++++||+|||+.|||+|+. |++.|++.+++|++.|++ ||+|+.++++
T Consensus 25 ~l~vG~~aPdf~l~~~~~~G~~~v~L~d~~~Gk~vvL~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~Is~d~~~ 104 (184)
T 3uma_A 25 TIAVGDKLPNATFKEKTADGPVEVTTELLFKGKRVVLFAVPGAFTPTCSLNHLPGYLENRDAILARGVDDIAVVAVNDLH 104 (184)
T ss_dssp CCCTTCBCCCCEEEEEETTEEEEEEHHHHHTTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHTTTCCEEEEEESSCHH
T ss_pred cCCCCCCCCCcEeecccCCCceEEeHHHHhCCCCEEEEEEcCCCCCCcCHHHHHHHHHHHHHHHHcCCCEEEEEECCCHH
Confidence 4799999999999998 99 99999997677789999999999999999 899999999999999999 9999999999
Q ss_pred HHHHHHhhcCCC--C----CCChHHHHHcCCccccccccCchhhHHHHHHHHhhhhhhccccccccccCCCceeeceEEE
Q 025756 143 QARTFSEQTKFK--G----DPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIV 216 (248)
Q Consensus 143 ~~~~f~~~~~fp--~----Dp~~~~y~alGl~~~~~~~~~P~a~~~~~k~~~~g~~~~~~~~~~g~~~~~~~~qlgG~fV 216 (248)
.+++|+++++++ + |++.++.++||+...... .|+ +....+++||
T Consensus 105 ~~~~f~~~~~~~~~fp~l~D~~~~va~~yGv~~~~~~---------------~g~---------------g~~~~r~tfi 154 (184)
T 3uma_A 105 VMGAWATHSGGMGKIHFLSDWNAAFTKAIGMEIDLSA---------------GTL---------------GIRSKRYSML 154 (184)
T ss_dssp HHHHHHHHHTCTTTSEEEECTTCHHHHHTTCEEEEGG---------------GTC---------------EEEECCEEEE
T ss_pred HHHHHHHHhCCCCceEEEEcCchHHHHHcCCceeccc---------------cCC---------------cccceeEEEE
Confidence 999999987765 4 999999999999754210 000 0134678999
Q ss_pred EeCCCCeEEEEEeCCCCCC--CCCHHHHHHHh
Q 025756 217 AGPGKSNISYIHRDKEAGD--DPDIQDILKAC 246 (248)
Q Consensus 217 vd~gg~~I~~~h~~~~~~D--h~~i~eIL~al 246 (248)
|+ +| +|+|.|++.++++ .+++++||+.|
T Consensus 155 Id-dG-~I~~~~~~~~~g~~~~~~~~~vL~~L 184 (184)
T 3uma_A 155 VE-DG-VVKALNIEESPGQATASGAAAMLELL 184 (184)
T ss_dssp EE-TT-EEEEEEECSSTTCCSTTSHHHHHHHC
T ss_pred EC-CC-EEEEEEEeCCCCCCcCCCHHHHHhhC
Confidence 97 87 9999999987765 89999999875
No 5
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=99.91 E-value=5e-24 Score=174.28 Aligned_cols=145 Identities=14% Similarity=0.161 Sum_probs=123.3
Q ss_pred ccccCcCCCcEEe--cCCC--CeEeCCCccCCCeEEEEEEcCCCChhhH-HHHHHHHhcHHHHHHCCCE-EEEEeCCCHH
Q 025756 69 EDTKNLLDTVKVY--DVNG--NAIPISDLWKDRKAVVAFARHFGCVLCR-KRADYLAAKKDVMDASGVA-LVLIGPGSVE 142 (248)
Q Consensus 69 ~~~g~~ap~f~L~--d~~G--~~v~l~~l~~~~~vvlvF~R~~~Cp~C~-~~l~~L~~~~~~l~~~Gv~-vV~Is~~~~~ 142 (248)
.++|+.+|+|++. |.+| +.++|+++++++++||.|+++.|||.|+ .|+.+|++.+++|++.|++ ||+|+.++++
T Consensus 4 ~~~G~~aP~f~l~~~~~~G~~~~~~l~~~~~gk~vvl~f~~~~~c~~C~~~e~~~l~~~~~~~~~~~v~~vv~Is~d~~~ 83 (162)
T 1tp9_A 4 IAVGDVLPDGKLAYFDEQDQLQEVSVHSLVAGKKVILFGVPGAFTPTCSLKHVPGFIEKAGELKSKGVTEILCISVNDPF 83 (162)
T ss_dssp CCTTCBCCCCEEEEECTTSCEEEEESHHHHTTSEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTTCCCEEEEESSCHH
T ss_pred CCCCCCCCCeEEEeecCCCCceeEeHHHHhCCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCHH
Confidence 5789999999986 8999 9999999656778888888899999999 8999999999999999999 9999999999
Q ss_pred HHHHHHhhcCC--CC----CCChHHHHHcCCccccccccCchhhHHHHHHHHhhhhhhccccccccccCCCceeeceEEE
Q 025756 143 QARTFSEQTKF--KG----DPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIV 216 (248)
Q Consensus 143 ~~~~f~~~~~f--p~----Dp~~~~y~alGl~~~~~~~~~P~a~~~~~k~~~~g~~~~~~~~~~g~~~~~~~~qlgG~fV 216 (248)
.+++|++++++ ++ |++.++.++||+..... + .|+ +....|.+||
T Consensus 84 ~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~----~-----------~g~---------------~~~~~p~~~v 133 (162)
T 1tp9_A 84 VMKAWAKSYPENKHVKFLADGSATYTHALGLELDLQ----E-----------KGL---------------GTRSRRFALL 133 (162)
T ss_dssp HHHHHHHTCTTCSSEEEEECTTSHHHHHTTCEEEET----T-----------TTS---------------EEEECCEEEE
T ss_pred HHHHHHHhcCCCCCeEEEECCCchHHHHcCcccccc----c-----------CCC---------------CccceeEEEE
Confidence 99999998765 44 99999999999874321 0 000 0135678999
Q ss_pred EeCCCCeEEEEEeCCCCCCCC--CHHHHHHHh
Q 025756 217 AGPGKSNISYIHRDKEAGDDP--DIQDILKAC 246 (248)
Q Consensus 217 vd~gg~~I~~~h~~~~~~Dh~--~i~eIL~al 246 (248)
|| +| +|+|.|++. +++++ ++++||++|
T Consensus 134 id-~G-~i~~~~~~~-~~~~~~~~~~~vl~~l 162 (162)
T 1tp9_A 134 VD-DL-KVKAANIEG-GGEFTVSSAEDILKDL 162 (162)
T ss_dssp EE-TT-EEEEEEECS-SSCCSSCSHHHHHTTC
T ss_pred EE-CC-EEEEEEeeC-CCCCccCCHHHHHhhC
Confidence 99 87 999999987 88887 899999764
No 6
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=99.91 E-value=1.2e-23 Score=172.07 Aligned_cols=142 Identities=13% Similarity=0.152 Sum_probs=124.3
Q ss_pred CCccccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCCHHHHHH
Q 025756 67 VSEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQART 146 (248)
Q Consensus 67 ~~~~~g~~ap~f~L~d~~G~~v~l~~l~~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~~~~~~~ 146 (248)
...++|+++|+|++.|.+|+.++|+++. ++++||.|++..||+.|+.++..|++.+++ .|++||+|+.|+.+.+++
T Consensus 18 ~~l~~G~~aP~f~l~~~~G~~~~l~~~~-Gk~vvl~f~~~~~c~~C~~~~~~l~~~~~~---~~~~vv~is~d~~~~~~~ 93 (166)
T 3p7x_A 18 QQINEGDFAPDFTVLDNDLNQVTLADYA-GKKKLISVVPSIDTGVCDQQTRKFNSDASK---EEGIVLTISADLPFAQKR 93 (166)
T ss_dssp CCCCTTSBCCCCEEECTTSCEEEGGGGT-TSCEEEEECSCTTSHHHHHHHHHHHHHSCT---TTSEEEEEESSCHHHHHH
T ss_pred ccCCCCCCCCCeEEEcCCCCEEeHHHhC-CCcEEEEEECCCCCCccHHHHHHHHHHhhc---CCCEEEEEECCCHHHHHH
Confidence 3468999999999999999999999974 568888888899999999999999998877 899999999999999999
Q ss_pred HHhhcCC-CC----CC-ChHHHHHcCCccccccccCchhhHHHHHHHHhhhhhhccccccccccCCCceeeceEEEEeCC
Q 025756 147 FSEQTKF-KG----DP-NHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGPG 220 (248)
Q Consensus 147 f~~~~~f-p~----Dp-~~~~y~alGl~~~~~~~~~P~a~~~~~k~~~~g~~~~~~~~~~g~~~~~~~~qlgG~fVvd~g 220 (248)
|++++++ ++ |+ +.++.++||+.... .+...|.+||||++
T Consensus 94 ~~~~~~~~~~~~l~D~~~~~~~~~~gv~~~~-----------------------------------~g~~~p~~~liD~~ 138 (166)
T 3p7x_A 94 WCASAGLDNVITLSDHRDLSFGENYGVVMEE-----------------------------------LRLLARAVFVLDAD 138 (166)
T ss_dssp HHHHHTCSSCEEEECTTTCHHHHHHTCEETT-----------------------------------TTEECCEEEEECTT
T ss_pred HHHHcCCCceEEccCCchhHHHHHhCCcccc-----------------------------------CCceeeEEEEECCC
Confidence 9998766 45 99 89999999986331 01235789999999
Q ss_pred CCeEEEEEeCCCCCCCCCHHHHHHHhhC
Q 025756 221 KSNISYIHRDKEAGDDPDIQDILKACCS 248 (248)
Q Consensus 221 g~~I~~~h~~~~~~Dh~~i~eIL~al~~ 248 (248)
| +|+|.|+..+..+++++++++++++.
T Consensus 139 G-~i~~~~~~~~~~~~~~~~~il~~l~~ 165 (166)
T 3p7x_A 139 N-KVVYKEIVSEGTDFPDFDAALAAYKN 165 (166)
T ss_dssp C-BEEEEEECSBTTSCCCHHHHHHHHHT
T ss_pred C-eEEEEEEcCCcccCCCHHHHHHHHhc
Confidence 8 99999999999999999999999863
No 7
>3tue_A Tryparedoxin peroxidase; thioredoxin fold, peroxiredoxin, oxidoreductase; 3.00A {Leishmania major} PDB: 1e2y_A
Probab=99.91 E-value=3.7e-24 Score=185.77 Aligned_cols=143 Identities=9% Similarity=0.064 Sum_probs=121.0
Q ss_pred CCccccCcCCCcE----EecCCCCeEeCCCccCCCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCCHH
Q 025756 67 VSEDTKNLLDTVK----VYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVE 142 (248)
Q Consensus 67 ~~~~~g~~ap~f~----L~d~~G~~v~l~~l~~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~~~ 142 (248)
...++|++||+|+ +.|.+|+.|+|+++. ++++||+||+..|||.|..|+++|++.+++|++.|++||+||.|+.+
T Consensus 24 ~~~~vG~~APdF~~~a~l~d~~g~~vsLsd~~-GK~vVL~FyP~d~TpvCt~E~~~f~~~~~eF~~~g~~vigiS~Ds~~ 102 (219)
T 3tue_A 24 GNAKINSPAPSFEEVALMPNGSFKKISLSSYK-GKWVVLFFYPLDFTFVCPTEVIAFSDSVSRFNELNCEVLACSIDSEY 102 (219)
T ss_dssp CCCCTTSBCCCCEEEEECTTSCEEEEEGGGGT-TSEEEEEECSCTTCSSCCHHHHHHHTTHHHHHTTTEEEEEEESSCHH
T ss_pred cccccCCcCCCCcccccccCCCCcEEehHHhC-CCEEEEEEecccCCCCCchhHhhHHHHHhhhccCCcEEEEeeCCchh
Confidence 3468999999999 557889999999975 47999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhc---------CCCC--CCChHHHHHcCCccccccccCchhhHHHHHHHHhhhhhhccccccccccCCCceee
Q 025756 143 QARTFSEQT---------KFKG--DPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQ 211 (248)
Q Consensus 143 ~~~~f~~~~---------~fp~--Dp~~~~y~alGl~~~~~~~~~P~a~~~~~k~~~~g~~~~~~~~~~g~~~~~~~~ql 211 (248)
..++|+++. +||+ |+++++.++||+.... .+...
T Consensus 103 sh~~w~~~~~~~~~~~~l~fpllsD~~~~va~~yGv~~~~-----------------------------------~g~~~ 147 (219)
T 3tue_A 103 AHLQWTLQDRKKGGLGTMAIPILADKTKNIARSYGVLEES-----------------------------------QGVAY 147 (219)
T ss_dssp HHHHHHHSCGGGTCCCSCSSCEEECTTSHHHHHTTCEETT-----------------------------------TTEEC
T ss_pred hHHHHhhhhHHhcCccccccccccCcccHHHHHcCCcccC-----------------------------------CCeeE
Confidence 999998642 3666 9999999999987431 01345
Q ss_pred ceEEEEeCCCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025756 212 GGIIVAGPGKSNISYIHRDKEAGDDPDIQDILKACC 247 (248)
Q Consensus 212 gG~fVvd~gg~~I~~~h~~~~~~Dh~~i~eIL~al~ 247 (248)
+|+||||++| +|+|.++....- -..++|||++|+
T Consensus 148 R~tFiIDp~g-~Ir~~~~~~~~~-gr~~~EvLr~l~ 181 (219)
T 3tue_A 148 RGLFIIDPHG-MLRQITVNDMPV-GRSVEEVLRLLE 181 (219)
T ss_dssp EEEEEECTTS-BEEEEEEECTTC-CCCHHHHHHHHH
T ss_pred EEEEEECCCC-eEEEEEEecCCC-CCCHHHHHHHHH
Confidence 6899999998 999999664333 337789988875
No 8
>3sbc_A Peroxiredoxin TSA1; alpha-beta fold, peroxidase, cytosol, oxidoreductase; 2.80A {Saccharomyces cerevisiae}
Probab=99.91 E-value=7.3e-24 Score=183.55 Aligned_cols=142 Identities=13% Similarity=0.119 Sum_probs=121.8
Q ss_pred CccccCcCCCcEEe---cCCCCeEeCCCccCCCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCCHHHH
Q 025756 68 SEDTKNLLDTVKVY---DVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQA 144 (248)
Q Consensus 68 ~~~~g~~ap~f~L~---d~~G~~v~l~~l~~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~~~~~ 144 (248)
..++|++||+|++. |.+|+.|+|+++. ++++||+||+..|||.|..|+.+|++.+++|++.|++||+||.|+.+.+
T Consensus 22 ~~~VG~~APdF~l~a~~d~~~~~vsLsd~~-GK~vVL~FyP~d~TpvCt~E~~~f~~~~~~f~~~g~~vigiS~Ds~~sh 100 (216)
T 3sbc_A 22 VAQVQKQAPTFKKTAVVDGVFDEVSLDKYK-GKYVVLAFIPLAFTFVSPTEIIAFSEAAKKFEEQGAQVLFASTDSEYSL 100 (216)
T ss_dssp CCCTTSBCCCCCEEEEETTEEEEECGGGGT-TSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHH
T ss_pred hhhcCCcCCCCCCcceECCCCcEEehHHhC-CCeEEEEEEcCCCCCcCchhhhHHHHhHHhhccCCceEEEeecCchhhH
Confidence 36899999999976 7778899999975 5789999999999999999999999999999999999999999999999
Q ss_pred HHHHhhc---------CCCC--CCChHHHHHcCCccccccccCchhhHHHHHHHHhhhhhhccccccccccCCCceeece
Q 025756 145 RTFSEQT---------KFKG--DPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGG 213 (248)
Q Consensus 145 ~~f~~~~---------~fp~--Dp~~~~y~alGl~~~~~~~~~P~a~~~~~k~~~~g~~~~~~~~~~g~~~~~~~~qlgG 213 (248)
++|++.. +||+ |+++++.++||+.... .+...+|
T Consensus 101 ~aw~~~~~~~~~~~~l~fpllsD~~~~vak~YGv~~~~-----------------------------------~g~~~R~ 145 (216)
T 3sbc_A 101 LAWTNIPRKEGGLGPINIPLLADTNHSLSRDYGVLIEE-----------------------------------EGVALRG 145 (216)
T ss_dssp HHHHTSCGGGTCCCSCSSCEEECTTSHHHHHHTCEETT-----------------------------------TTEECEE
T ss_pred HHHHHHHHHhCCccCcccceEeCCCCHHHHHcCCeecc-----------------------------------CCceeeE
Confidence 9999642 4776 9999999999987431 1134679
Q ss_pred EEEEeCCCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025756 214 IIVAGPGKSNISYIHRDKEAGDDPDIQDILKACC 247 (248)
Q Consensus 214 ~fVvd~gg~~I~~~h~~~~~~Dh~~i~eIL~al~ 247 (248)
+||||++| +|+|..+....- -..++|+|++++
T Consensus 146 tFiID~~G-~Ir~~~v~~~~~-grn~dEiLr~l~ 177 (216)
T 3sbc_A 146 LFIIDPKG-VIRHITINDLPV-GRNVDEALRLVE 177 (216)
T ss_dssp EEEECTTS-BEEEEEEECTTB-CCCHHHHHHHHH
T ss_pred EEEECCCC-eEEEEEEcCCCC-CCCHHHHHHHHH
Confidence 99999998 999999875443 458899998875
No 9
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=99.90 E-value=4.8e-23 Score=167.97 Aligned_cols=141 Identities=9% Similarity=0.131 Sum_probs=121.2
Q ss_pred CccccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCCHHHHHHH
Q 025756 68 SEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTF 147 (248)
Q Consensus 68 ~~~~g~~ap~f~L~d~~G~~v~l~~l~~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~~~~~~~f 147 (248)
..++|+.+|+|++.|.+|+.++++++. ++++||.|+++.||+.|+.++..|++.++++ .|++||+|+.|+.+.+++|
T Consensus 15 ~~~~G~~~P~f~l~~~~G~~v~l~~~~-gk~vvl~F~~~~~c~~C~~~~~~l~~~~~~~--~~v~vv~is~d~~~~~~~~ 91 (163)
T 1psq_A 15 QLQVGDKALDFSLTTTDLSKKSLADFD-GKKKVLSVVPSIDTGICSTQTRRFNEELAGL--DNTVVLTVSMDLPFAQKRW 91 (163)
T ss_dssp CCCTTSBCCCCEEECTTSCEEEGGGGT-TSEEEEEECSCTTSHHHHHHHHHHHHHTTTC--TTEEEEEEESSCHHHHHHH
T ss_pred CCCCCCCCCCEEEEcCCCcEeeHHHhC-CCEEEEEEECCCCCCccHHHHHHHHHHHHHc--CCcEEEEEECCCHHHHHHH
Confidence 468899999999999999999999974 4566666666799999999999999999998 7999999999999999999
Q ss_pred HhhcCC-CC----C-CChHHHHHcCCccccccccCchhhHHHHHHHHhhhhhhccccccccccCCCceeeceEEEEeCCC
Q 025756 148 SEQTKF-KG----D-PNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGPGK 221 (248)
Q Consensus 148 ~~~~~f-p~----D-p~~~~y~alGl~~~~~~~~~P~a~~~~~k~~~~g~~~~~~~~~~g~~~~~~~~qlgG~fVvd~gg 221 (248)
++++++ ++ | ++.+++++||+.... .++..|.+||||++|
T Consensus 92 ~~~~~~~~~~~l~D~~~~~~~~~~gv~~~~-----------------------------------~g~~~p~~~liD~~G 136 (163)
T 1psq_A 92 CGAEGLDNAIMLSDYFDHSFGRDYALLINE-----------------------------------WHLLARAVFVLDTDN 136 (163)
T ss_dssp HHHHTCTTSEEEECTTTCHHHHHHTCBCTT-----------------------------------TCSBCCEEEEECTTC
T ss_pred HHhcCCCCcEEecCCchhHHHHHhCCcccc-----------------------------------CCceEEEEEEEcCCC
Confidence 997766 54 9 889999999886321 002356899999998
Q ss_pred CeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025756 222 SNISYIHRDKEAGDDPDIQDILKACC 247 (248)
Q Consensus 222 ~~I~~~h~~~~~~Dh~~i~eIL~al~ 247 (248)
+|++.|.+.+..+++++++++++++
T Consensus 137 -~i~~~~~g~~~~~~~~~~~~l~~l~ 161 (163)
T 1psq_A 137 -TIRYVEYVDNINSEPNFEAAIAAAK 161 (163)
T ss_dssp -BEEEEEECSBTTSCCCHHHHHHHHH
T ss_pred -eEEEEEecCCcCCCCCHHHHHHHHH
Confidence 9999999999999999999999886
No 10
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=99.90 E-value=3e-23 Score=170.20 Aligned_cols=143 Identities=11% Similarity=0.147 Sum_probs=122.3
Q ss_pred CccccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCCHHHHHHH
Q 025756 68 SEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTF 147 (248)
Q Consensus 68 ~~~~g~~ap~f~L~d~~G~~v~l~~l~~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~~~~~~~f 147 (248)
..++|+++|+|++.|.+|+.++++++. ++++||.|+++.|||+|+.++.+|++.++++ .|++||+|+.++.+.+++|
T Consensus 20 ~l~~g~~~P~f~l~~~~G~~~~l~~~~-gk~vvl~f~~~~~C~~C~~~~~~l~~~~~~~--~~v~vv~Is~d~~~~~~~~ 96 (171)
T 2yzh_A 20 ELKVGDRAPEAVVVTKDLQEKIVGGAK-DVVQVIITVPSLDTPVCETETKKFNEIMAGM--EGVDVTVVSMDLPFAQKRF 96 (171)
T ss_dssp CCCTTSBCCCEEEEETTSCEEEESSCC-SSEEEEEECSCTTSHHHHHHHHHHHHHTTTC--TTEEEEEEESSCHHHHHHH
T ss_pred cCCCCCcCCceEEECCCCCEeeHHHhC-CCeEEEEEECCCCCCchHHHHHHHHHHHHHc--CCceEEEEeCCCHHHHHHH
Confidence 468899999999999999999999974 5677777777999999999999999999998 8999999999999999999
Q ss_pred HhhcCC-CC----C-CChHHHHHcCCccccccccCchhhHHHHHHHHhhhhhhccccccccccCCCceeeceEEEEeCCC
Q 025756 148 SEQTKF-KG----D-PNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGPGK 221 (248)
Q Consensus 148 ~~~~~f-p~----D-p~~~~y~alGl~~~~~~~~~P~a~~~~~k~~~~g~~~~~~~~~~g~~~~~~~~qlgG~fVvd~gg 221 (248)
++++++ ++ | ++.++ ++||+..... + ..++..|.+||||++|
T Consensus 97 ~~~~~~~~~~~l~D~~~~~~-~~~gv~~~~~----~----------------------------~~g~~~p~~~liD~~G 143 (171)
T 2yzh_A 97 CESFNIQNVTVASDFRYRDM-EKYGVLIGEG----A----------------------------LKGILARAVFIIDKEG 143 (171)
T ss_dssp HHHTTCCSSEEEECTTTCGG-GGGTCBBCSS----T----------------------------TTTSBCCEEEEECTTS
T ss_pred HHHcCCCCeEEeecCccCcH-HHhCCEeccc----c----------------------------cCCceeeEEEEEcCCC
Confidence 998766 44 9 88999 9999874321 0 0012467899999998
Q ss_pred CeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025756 222 SNISYIHRDKEAGDDPDIQDILKACC 247 (248)
Q Consensus 222 ~~I~~~h~~~~~~Dh~~i~eIL~al~ 247 (248)
+|++.|.+.+..++++.++++++++
T Consensus 144 -~i~~~~~~~~~~~~~~~~~ll~~l~ 168 (171)
T 2yzh_A 144 -KVAYVQLVPEITEEPNYDEVVNKVK 168 (171)
T ss_dssp -BEEEEEECSBTTSCCCCHHHHHHHH
T ss_pred -eEEEEEeCCCcCCCCCHHHHHHHHH
Confidence 9999999988899999999999876
No 11
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=99.90 E-value=7.7e-23 Score=169.18 Aligned_cols=146 Identities=11% Similarity=0.114 Sum_probs=122.4
Q ss_pred ccccCcCCCcEEe-cCCCCeEeCCCccCCCeEEEEEEcCCCChhhHH-HHHHHHhcHHHHHHCCC-EEEEEeCCCHHHHH
Q 025756 69 EDTKNLLDTVKVY-DVNGNAIPISDLWKDRKAVVAFARHFGCVLCRK-RADYLAAKKDVMDASGV-ALVLIGPGSVEQAR 145 (248)
Q Consensus 69 ~~~g~~ap~f~L~-d~~G~~v~l~~l~~~~~vvlvF~R~~~Cp~C~~-~l~~L~~~~~~l~~~Gv-~vV~Is~~~~~~~~ 145 (248)
.++|+.+|+|++. |.+|+.++|+++++++++||+|||+.|||.|+. |+..|++.+++|++.|+ +||+|+.++.+.++
T Consensus 3 l~~G~~aP~f~l~~~~~G~~v~L~d~~~Gk~vvl~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~Is~d~~~~~~ 82 (167)
T 2wfc_A 3 IKEGDKLPAVTVFGATPNDKVNMAELFAGKKGVLFAVPGAFTPGSSKTHLPGYVEQAAAIHGKGVDIIACMAVNDSFVMD 82 (167)
T ss_dssp CCTTCBCCCCEEESSSTTCEEEHHHHTTTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHHTTCCEEEEEESSCHHHHH
T ss_pred CCCCCcCCCcEeecCCCCcEEeHHHHhCCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEeCCCHHHHH
Confidence 5789999999999 999999999998677799999999999999999 99999999999999999 99999999999999
Q ss_pred HHHhhcCCC--C----CCChHHHHHcCCccccccccCchhhHHHHHHHHhhhhhhccccccccccCCCceeeceEEEEeC
Q 025756 146 TFSEQTKFK--G----DPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGP 219 (248)
Q Consensus 146 ~f~~~~~fp--~----Dp~~~~y~alGl~~~~~~~~~P~a~~~~~k~~~~g~~~~~~~~~~g~~~~~~~~qlgG~fVvd~ 219 (248)
+|+++++++ + |++.++.++||+..... .. + | .....|.+||| +
T Consensus 83 ~~~~~~~~~~~fp~l~D~~~~~~~~~gv~~~~~---------~~---~--g----------------~~~~~p~t~lI-~ 131 (167)
T 2wfc_A 83 AWGKAHGADDKVQMLADPGGAFTKAVDMELDLS---------AV---L--G----------------NVRSKRYSLVI-E 131 (167)
T ss_dssp HHHHHTTCTTTSEEEECTTSHHHHHTTCEECCH---------HH---H--S----------------SCEECCEEEEE-E
T ss_pred HHHHhcCCCcceEEEECCCCcHHHHcCCccccc---------cc---c--C----------------cccceEEEEEE-e
Confidence 999987655 4 99999999999874420 00 0 0 01346789999 8
Q ss_pred CCCeEEEEEeCCCCC--CCCCHHHHHHHh
Q 025756 220 GKSNISYIHRDKEAG--DDPDIQDILKAC 246 (248)
Q Consensus 220 gg~~I~~~h~~~~~~--Dh~~i~eIL~al 246 (248)
+| +|+|.+++.++. +-...+.+|+.+
T Consensus 132 ~G-~I~~~~~~~~~~~~~~~~~~~~~~~~ 159 (167)
T 2wfc_A 132 DG-VVTKVNVEPDGKGLTCSLAPNILSQL 159 (167)
T ss_dssp TT-EEEEEEECTTSSSSSTTSHHHHHHHH
T ss_pred CC-EEEEEEecCCCCcceeccHHHHHHHh
Confidence 87 999999986653 445667777765
No 12
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=99.90 E-value=4.1e-23 Score=167.18 Aligned_cols=150 Identities=12% Similarity=0.072 Sum_probs=122.0
Q ss_pred CCCCccccCcCCCcE--EecCCCCeEeCCCccCCCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCCHH
Q 025756 65 PSVSEDTKNLLDTVK--VYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVE 142 (248)
Q Consensus 65 ~~~~~~~g~~ap~f~--L~d~~G~~v~l~~l~~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~~~ 142 (248)
..+..++|+++|+|+ +.|.+|+.++++++. ++++||+|+++.|||.|+.++..|++.++++++.|++||+|+.|+.+
T Consensus 3 ~m~~l~~G~~~P~f~~~l~~~~G~~~~l~~~~-gk~~vl~F~~~~~c~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~ 81 (163)
T 3gkn_A 3 AMTDAVLELPAATFDLPLSLSGGTQTTLRAHA-GHWLVIYFYPKDSTPGATTEGLDFNALLPEFDKAGAKILGVSRDSVK 81 (163)
T ss_dssp -CCCCCCCCCGGGGGCCEECSTTCEECSGGGT-TSCEEEEECSCTTSHHHHHHHHHHHHHHHHHHHTTCEEEEEESSCHH
T ss_pred cccccccCCcCCCccccccCCCCCEEEHHHhC-CCcEEEEEeCCCCCCcHHHHHHHHHHHHHHHHHCCCEEEEEeCCCHH
Confidence 334578999999999 999999999999975 45777777778999999999999999999999999999999999999
Q ss_pred HHHHHHhhcC--CCC--CCChHHHHHcCCccccccccCchhhHHHHHHHHhhhhhhccccccccccCCCceeeceEEEEe
Q 025756 143 QARTFSEQTK--FKG--DPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAG 218 (248)
Q Consensus 143 ~~~~f~~~~~--fp~--Dp~~~~y~alGl~~~~~~~~~P~a~~~~~k~~~~g~~~~~~~~~~g~~~~~~~~qlgG~fVvd 218 (248)
.+++|+++++ ||+ |++.+++++||+...... . + .... -..|.+||||
T Consensus 82 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~~~-~--------------~------~~~~--------~~~p~~~lid 132 (163)
T 3gkn_A 82 SHDNFCAKQGFAFPLVSDGDEALCRAFDVIKEKNM-Y--------------G------KQVL--------GIERSTFLLS 132 (163)
T ss_dssp HHHHHHHHHCCSSCEEECTTCHHHHHTTCEEEEEE-T--------------T------EEEE--------EECCEEEEEC
T ss_pred HHHHHHHHhCCCceEEECCcHHHHHHhCCcccccc-c--------------c------cccc--------CcceEEEEEC
Confidence 9999999877 554 999999999998753210 0 0 0000 1267999999
Q ss_pred CCCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025756 219 PGKSNISYIHRDKEAGDDPDIQDILKACC 247 (248)
Q Consensus 219 ~gg~~I~~~h~~~~~~Dh~~i~eIL~al~ 247 (248)
++| +|++.|.+ ......+++|+++++
T Consensus 133 ~~G-~i~~~~~~--~~~~~~~~~il~~l~ 158 (163)
T 3gkn_A 133 PEG-QVVQAWRK--VKVAGHADAVLAALK 158 (163)
T ss_dssp TTS-CEEEEECS--CCSTTHHHHHHHHHH
T ss_pred CCC-eEEEEEcC--CCcccCHHHHHHHHH
Confidence 998 99999944 444567789988775
No 13
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=99.90 E-value=2.3e-23 Score=172.70 Aligned_cols=146 Identities=15% Similarity=0.190 Sum_probs=120.1
Q ss_pred ccccCcCCCcEEecC----CC-----CeEeCCCccCCCeEEEEEEcCCCChhhHHH-HHHHHhcHHHHHHCCCE-EEEEe
Q 025756 69 EDTKNLLDTVKVYDV----NG-----NAIPISDLWKDRKAVVAFARHFGCVLCRKR-ADYLAAKKDVMDASGVA-LVLIG 137 (248)
Q Consensus 69 ~~~g~~ap~f~L~d~----~G-----~~v~l~~l~~~~~vvlvF~R~~~Cp~C~~~-l~~L~~~~~~l~~~Gv~-vV~Is 137 (248)
..+|+++|+|++.+. +| +.++|+++++++++||+|||+.|||+|+.| +.+|++.+++|++.|++ ||+|+
T Consensus 7 ~~~g~~aP~f~l~~~~~~~~G~~~~~~~v~l~~~~~gk~vvl~~~~a~wcp~C~~eh~p~l~~~~~~~~~~g~~~vv~Is 86 (171)
T 2pwj_A 7 TDILSAASNVSLQKARTWDEGVESKFSTTPVNDIFKDKKVVIFGLPGAYTGVCSSKHVPPYKHNIDKFKAKGVDSVICVA 86 (171)
T ss_dssp ---CCCSSSBCCCSCEECCCSSCTTCCCEEHHHHHTTSEEEEEECSCTTCTTHHHHTHHHHHHTHHHHHHTTCSEEEEEE
T ss_pred ccccCcCCCeEEecccccccCCccCcceEEHHHHhCCCCEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEe
Confidence 456779999999998 57 999999976667899999999999999999 99999999999999999 99999
Q ss_pred CCCHHHHHHHHhhcC----CCC--CCChHHHHHcCCccccccccCchhhHHHHHHHHhhhhhhccccccccccCCCceee
Q 025756 138 PGSVEQARTFSEQTK----FKG--DPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQ 211 (248)
Q Consensus 138 ~~~~~~~~~f~~~~~----fp~--Dp~~~~y~alGl~~~~~~~~~P~a~~~~~k~~~~g~~~~~~~~~~g~~~~~~~~ql 211 (248)
.++.+.+++|+++++ ||+ |++.++.++||+..... . .++ +....
T Consensus 87 ~d~~~~~~~~~~~~~~~~~fp~l~D~~~~~~~~ygv~~~~~-----~----------~~~---------------g~~~~ 136 (171)
T 2pwj_A 87 INDPYTVNAWAEKIQAKDAIEFYGDFDGSFHKSLELTTDLS-----A----------GLL---------------GIRSE 136 (171)
T ss_dssp SSCHHHHHHHHHHTTCTTTSEEEECTTCHHHHHHTCEEECT-----T----------TTC---------------CEEEC
T ss_pred CCCHHHHHHHHHHhCCCCceEEEECCccHHHHHhCCccccc-----c----------ccC---------------Ccccc
Confidence 999999999999876 454 99999999999874321 0 000 00134
Q ss_pred ceEEEEeCCCCeEEEEEeCCCCCC--CCCHHHHHHHh
Q 025756 212 GGIIVAGPGKSNISYIHRDKEAGD--DPDIQDILKAC 246 (248)
Q Consensus 212 gG~fVvd~gg~~I~~~h~~~~~~D--h~~i~eIL~al 246 (248)
+.+|+|+ +| +|+|.|++.++++ +.++++||++|
T Consensus 137 ~~t~~I~-~G-~I~~~~~~~~~~~~~~~~~~~il~~l 171 (171)
T 2pwj_A 137 RWSAYVV-DG-KVKALNVEESPSDVKVSGAETILGQI 171 (171)
T ss_dssp CEEEEEE-TT-EEEEEEECSSTTCCSSSSHHHHHHHC
T ss_pred eeEEEEE-CC-EEEEEEeecCCCCCcccCHHHHHhcC
Confidence 4688888 87 9999999988875 57999999875
No 14
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.90 E-value=7.5e-23 Score=166.24 Aligned_cols=140 Identities=16% Similarity=0.119 Sum_probs=119.3
Q ss_pred ccccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCCHHHHHHHH
Q 025756 69 EDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFS 148 (248)
Q Consensus 69 ~~~g~~ap~f~L~d~~G~~v~l~~l~~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~~~~~~~f~ 148 (248)
+++|+++|+|++.|.+|+.++++++.++.++||.|+|..||++|+.++..|.+.++++++.|+++|+|+.|+.+.+++|+
T Consensus 2 l~~G~~~P~f~l~~~~G~~~~l~~~~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d~~~~~~~~~ 81 (161)
T 3drn_A 2 VKVGDKAPLFEGIADNGEKISLSDYIGKHNIVLYFYPKDDTPGSTREASAFRDNWDLLKDYDVVVIGVSSDDINSHKRFK 81 (161)
T ss_dssp CCTTSBCCCCEEEETTSCEEEGGGTTTTSEEEEEECSCTTCHHHHHHHHHHHHTHHHHHTTCEEEEEEESCCHHHHHHHH
T ss_pred CCCCCcCCCeEeecCCCCEEEHHHhcCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHH
Confidence 47899999999999999999999985443477777779999999999999999999999999999999999999999999
Q ss_pred hhcCCCC----CCChHHHHHcCCccccccccCchhhHHHHHHHHhhhhhhccccccccccCCCceeeceEEEEeCCCCeE
Q 025756 149 EQTKFKG----DPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGPGKSNI 224 (248)
Q Consensus 149 ~~~~fp~----Dp~~~~y~alGl~~~~~~~~~P~a~~~~~k~~~~g~~~~~~~~~~g~~~~~~~~qlgG~fVvd~gg~~I 224 (248)
+++++++ |++.+++++||+... ....|.+||||++| +|
T Consensus 82 ~~~~~~~~~~~d~~~~~~~~~~v~~~-------------------------------------~~~~P~~~lid~~G-~i 123 (161)
T 3drn_A 82 EKYKLPFILVSDPDKKIRELYGAKGF-------------------------------------ILPARITFVIDKKG-II 123 (161)
T ss_dssp HHTTCCSEEEECTTSHHHHHTTCCCS-------------------------------------SSCCCEEEEECTTS-BE
T ss_pred HHhCCCceEEECCcHHHHHHcCCCCc-------------------------------------CcccceEEEECCCC-EE
Confidence 9888655 999999999988610 02356899999998 99
Q ss_pred EEEEeCCCCCCCCCHHHHHHHhh
Q 025756 225 SYIHRDKEAGDDPDIQDILKACC 247 (248)
Q Consensus 225 ~~~h~~~~~~Dh~~i~eIL~al~ 247 (248)
++.+.+. ......+++++++++
T Consensus 124 ~~~~~g~-~~~~~~~~~il~~l~ 145 (161)
T 3drn_A 124 RHIYNSQ-MNPANHVNEALKALK 145 (161)
T ss_dssp EEEEECS-SCTTHHHHHHHHHHH
T ss_pred EEEEecC-CCCCcCHHHHHHHHH
Confidence 9999873 334567788888765
No 15
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=99.90 E-value=3.2e-23 Score=169.52 Aligned_cols=143 Identities=12% Similarity=0.178 Sum_probs=122.0
Q ss_pred ccccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCCHHHHHHHH
Q 025756 69 EDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFS 148 (248)
Q Consensus 69 ~~~g~~ap~f~L~d~~G~~v~l~~l~~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~~~~~~~f~ 148 (248)
.++|+.+|+|++.|.+|+.++|+++ +++++||.|++..||+.|+.++..|++.++++ .|++||+|+.|+.+.+++|+
T Consensus 17 ~~~G~~~P~f~l~~~~G~~v~l~~~-~gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~--~~v~vv~Is~d~~~~~~~~~ 93 (165)
T 1q98_A 17 PQVGEIVENFILVGNDLADVALNDF-ASKRKVLNIFPSIDTGVCATSVRKFNQQAAKL--SNTIVLCISADLPFAQARFC 93 (165)
T ss_dssp CCTTCBCCCCEEECTTSCEEEGGGG-TTSEEEEEECSCSCSSCCCHHHHHHHHHHHHS--TTEEEEEEESSCHHHHTTCT
T ss_pred CCCCCCCCCeEEECCCCCEEehHHh-CCCeEEEEEECCCCCCccHHHHHHHHHHHHHc--CCCEEEEEeCCCHHHHHHHH
Confidence 5789999999999999999999997 45577777777999999999999999999999 79999999999999999999
Q ss_pred hhcCC-CC----CC-ChHHHHHcCCccccccccCchhhHHHHHHHHhhhhhhccccccccccCCCceeeceEEEEeCCCC
Q 025756 149 EQTKF-KG----DP-NHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGPGKS 222 (248)
Q Consensus 149 ~~~~f-p~----Dp-~~~~y~alGl~~~~~~~~~P~a~~~~~k~~~~g~~~~~~~~~~g~~~~~~~~qlgG~fVvd~gg~ 222 (248)
+++++ ++ |+ +.+++++||+..... +. . +...|.+||||++|
T Consensus 94 ~~~~~~~~~~l~D~~~~~~~~~~gv~~~~~----~~---------------------~-------g~~~p~~~liD~~G- 140 (165)
T 1q98_A 94 GAEGIENAKTVSTFRNHALHSQLGVDIQTG----PL---------------------A-------GLTSRAVIVLDEQN- 140 (165)
T ss_dssp TTTTCTTEEEEECTTCTHHHHHTTCEECSS----TT---------------------T-------TSBCCEEEEECTTS-
T ss_pred HHcCCCceEEeeccccchHHHHhCceeccc----cc---------------------C-------CccceeEEEEcCCC-
Confidence 98766 44 98 899999999864210 00 0 12457899999998
Q ss_pred eEEEEEeCCCCCCCCCHHHHHHHhh
Q 025756 223 NISYIHRDKEAGDDPDIQDILKACC 247 (248)
Q Consensus 223 ~I~~~h~~~~~~Dh~~i~eIL~al~ 247 (248)
+|++.|.+.+..++++++++|++++
T Consensus 141 ~i~~~~~~~~~~~~~~~~~~l~~l~ 165 (165)
T 1q98_A 141 NVLHSQLVEEIKEEPNYEAALAVLA 165 (165)
T ss_dssp BEEEEEECSBTTSCCCHHHHHHTTC
T ss_pred EEEEEEeCCCCCCCCCHHHHHHhhC
Confidence 9999999888999999999999874
No 16
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=99.90 E-value=3.7e-23 Score=175.62 Aligned_cols=144 Identities=10% Similarity=0.102 Sum_probs=125.2
Q ss_pred CccccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCCHHHHHHH
Q 025756 68 SEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTF 147 (248)
Q Consensus 68 ~~~~g~~ap~f~L~d~~G~~v~l~~l~~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~~~~~~~f 147 (248)
..++|+.+|+|++.|.+|+.++|+++. ++++||.|++..||+.|+.++..|++.++++ .|++||+|+.|+.+.+++|
T Consensus 51 ~l~~G~~aPdf~l~d~~G~~v~L~d~~-Gk~vvl~F~~~~~c~~C~~e~~~l~~l~~~~--~~v~vv~Is~D~~~~~~~~ 127 (200)
T 3zrd_A 51 LPQIGDKAKDFTLVAKDLSDVALSSFA-GKRKVLNIFPSIDTGVCAASVRKFNQLAGEL--ENTVVLCISSDLPFAQSRF 127 (200)
T ss_dssp CCCTTCBCCCCEEECTTSCEEEGGGGT-TSEEEEEECSCCCCSCCCHHHHHHHHHHHTS--TTEEEEEEESSCHHHHTTC
T ss_pred cCCCCCCCCCeEEECCCCCEEcHHHhC-CCcEEEEEECCCCCchhHHHHHHHHHHHHHh--CCCEEEEEECCCHHHHHHH
Confidence 468999999999999999999999974 5677888888999999999999999999999 7999999999999999999
Q ss_pred HhhcCC-CC----CC-ChHHHHHcCCccccccccCchhhHHHHHHHHhhhhhhccccccccccCCCceeeceEEEEeCCC
Q 025756 148 SEQTKF-KG----DP-NHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGPGK 221 (248)
Q Consensus 148 ~~~~~f-p~----Dp-~~~~y~alGl~~~~~~~~~P~a~~~~~k~~~~g~~~~~~~~~~g~~~~~~~~qlgG~fVvd~gg 221 (248)
++++++ ++ |+ +.++.++||+..... + ..| ...|++||||++|
T Consensus 128 ~~~~~~~~f~~l~D~~~~~~~~~ygv~~~~~----~---------------------~~g-------~~~p~~~lID~~G 175 (200)
T 3zrd_A 128 CGAEGLSNVITLSTLRGADFKQAYGVAITEG----P---------------------LAG-------LTARAVVVLDGQD 175 (200)
T ss_dssp TTTTTCTTEEEEETTSCTHHHHHTTCEECSS----T---------------------TTT-------SBCCEEEEECTTS
T ss_pred HHHcCCCCceEEecCchHHHHHHhCceeecc----c---------------------CCC-------ccccEEEEECCCC
Confidence 998776 55 99 999999999874321 0 001 2457899999998
Q ss_pred CeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025756 222 SNISYIHRDKEAGDDPDIQDILKACC 247 (248)
Q Consensus 222 ~~I~~~h~~~~~~Dh~~i~eIL~al~ 247 (248)
+|+|.|+.....+.++++++|++++
T Consensus 176 -~I~~~~~~~~~~~~~~~~~~l~~Lk 200 (200)
T 3zrd_A 176 -NVIYSELVNEITTEPNYDAALAALK 200 (200)
T ss_dssp -BEEEEEECSBTTSCCCHHHHHHHHC
T ss_pred -eEEEEEecCCcccCCCHHHHHHhhC
Confidence 9999999999999999999999874
No 17
>1xiy_A Peroxiredoxin, pfaop; alpha-aneurysm, thioredoxin fold, peroxiredoxin fold, oxidoreductase; 1.80A {Plasmodium falciparum} SCOP: c.47.1.10
Probab=99.90 E-value=7.5e-23 Score=172.72 Aligned_cols=147 Identities=12% Similarity=0.118 Sum_probs=123.2
Q ss_pred cccCcCCCcEEec--C---------CC----CeEeCCCccCCCeEEEEEEcCCCChhhH-HHHHHHHhcHHHH-HHCCCE
Q 025756 70 DTKNLLDTVKVYD--V---------NG----NAIPISDLWKDRKAVVAFARHFGCVLCR-KRADYLAAKKDVM-DASGVA 132 (248)
Q Consensus 70 ~~g~~ap~f~L~d--~---------~G----~~v~l~~l~~~~~vvlvF~R~~~Cp~C~-~~l~~L~~~~~~l-~~~Gv~ 132 (248)
++|+++|+|+|.+ . +| +.++|+++++++++||+||++.|||.|. .|++.|++.+++| ++.|++
T Consensus 2 ~vGd~aPdf~l~~~~~~~~~~~~~~~G~~~~~~v~l~d~~~gk~vVL~fyP~~fTp~Ct~~e~~~f~~~~~~f~~~~g~~ 81 (182)
T 1xiy_A 2 KENDLIPNVKVMIDVRNMNNISDTDGSPNDFTSIDTHELFNNKKILLISLPGAFTPTCSTKMIPGYEEEYDYFIKENNFD 81 (182)
T ss_dssp CTTCBCCCCEEEEEHHHHTC--------CCEEEEEHHHHSTTCEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTSCCS
T ss_pred CCCCCCCCeEEEcccccccccccccCCCccceeEeHHHHhCCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHhCCCc
Confidence 6899999999998 4 67 7999999878889999999999999999 9999999999999 999996
Q ss_pred -EEEEeCCCHHHHHHHHhhcC---CCC--CCChHHHHHcCCccccccccCchhhHHHHHHHHhhhhhhccccccccccCC
Q 025756 133 -LVLIGPGSVEQARTFSEQTK---FKG--DPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSR 206 (248)
Q Consensus 133 -vV~Is~~~~~~~~~f~~~~~---fp~--Dp~~~~y~alGl~~~~~~~~~P~a~~~~~k~~~~g~~~~~~~~~~g~~~~~ 206 (248)
|++||.+++..+++|+++.+ ||+ |+++++.++||+..... . .|+
T Consensus 82 ~V~gvS~D~~~~~~~~~~~~~~~~f~lLsD~~~~~a~~yGv~~~~~-----~----------~G~--------------- 131 (182)
T 1xiy_A 82 DIYCITNNDIYVLKSWFKSMDIKKIKYISDGNSSFTDSMNMLVDKS-----N----------FFM--------------- 131 (182)
T ss_dssp EEEEEESSCHHHHHHHHHHTTCCSSEEEECTTSHHHHHTTCEEECG-----G----------GTC---------------
T ss_pred EEEEEeCCCHHHHHHHHHHcCCCCceEEEeCchHHHHHhCCceecc-----c----------cCC---------------
Confidence 99999999999999998765 455 99999999999974321 0 000
Q ss_pred CceeeceEEEEeCCCCeEEEEEeCCCCCC--------CCCHHHHHHHhhC
Q 025756 207 GGWQQGGIIVAGPGKSNISYIHRDKEAGD--------DPDIQDILKACCS 248 (248)
Q Consensus 207 ~~~qlgG~fVvd~gg~~I~~~h~~~~~~D--------h~~i~eIL~al~~ 248 (248)
+....+++|||| +| +|+|.++..++.+ +.++++||++|++
T Consensus 132 g~~~~R~tfvId-dG-~V~~~~v~~~~~~~~~~~~~~~~~~~~vL~~L~~ 179 (182)
T 1xiy_A 132 GMRPWRFVAIVE-NN-ILVKMFQEKDKQHNIQTDPYDISTVNNVKEFLKN 179 (182)
T ss_dssp CEEECCEEEEEE-TT-EEEEEEECSSCCTTCSSCCCSTTSHHHHHHHHHC
T ss_pred CCceEEEEEEEc-CC-EEEEEEEeCCcccccccCcccCCCHHHHHHHHHh
Confidence 112456799999 87 9999999876654 7899999999874
No 18
>4f82_A Thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.85A {Burkholderia cenocepacia}
Probab=99.90 E-value=6.8e-23 Score=172.34 Aligned_cols=148 Identities=12% Similarity=0.120 Sum_probs=123.0
Q ss_pred ccccCcCCCcEEecCCC----------CeEeCCCccCCCeEEEEEEcCCCChhhHH-HHHHHHhcHHHHHHCCC-EEEEE
Q 025756 69 EDTKNLLDTVKVYDVNG----------NAIPISDLWKDRKAVVAFARHFGCVLCRK-RADYLAAKKDVMDASGV-ALVLI 136 (248)
Q Consensus 69 ~~~g~~ap~f~L~d~~G----------~~v~l~~l~~~~~vvlvF~R~~~Cp~C~~-~l~~L~~~~~~l~~~Gv-~vV~I 136 (248)
.++||++|++++...++ +.++|+++++++++||+|||+.|||.|.. |+++|++.+++|+++|+ +||+|
T Consensus 10 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~vsLsd~~~Gk~vVL~fyP~~~tp~Ct~~El~~f~~~~~ef~~~g~d~VigI 89 (176)
T 4f82_A 10 IQVGDALPDAQLFEFIDDAREGCTLGPNACSVRDQVAGKRVVIFGLPGAFTPTCSAQHVPGYVEHAEQLRAAGIDEIWCV 89 (176)
T ss_dssp CCTTCBCCCCEEEEEECSCCTTCCSEEEEEEHHHHHTTCEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred hhcCCcCCceEEEEecccccccccCCceEEeHHHHhCCCeEEEEEEcCCCCCCCCHHHHHHHHHHHHHHHhCCCCEEEEE
Confidence 58999999988876533 68999998778899999999999999999 99999999999999999 99999
Q ss_pred eCCCHHHHHHHHhhcCCC--C----CCChHHHHHcCCccccccccCchhhHHHHHHHHhhhhhhccccccccccCCCcee
Q 025756 137 GPGSVEQARTFSEQTKFK--G----DPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQ 210 (248)
Q Consensus 137 s~~~~~~~~~f~~~~~fp--~----Dp~~~~y~alGl~~~~~~~~~P~a~~~~~k~~~~g~~~~~~~~~~g~~~~~~~~q 210 (248)
|.++++..++|+++.+.+ + |++.++.++||+..... ..|+ +...
T Consensus 90 S~D~~~~~~~f~~~~~l~~~f~lLsD~~~~va~ayGv~~~~~---------------~~G~---------------g~~s 139 (176)
T 4f82_A 90 SVNDAFVMGAWGRDLHTAGKVRMMADGSAAFTHALGLTQDLS---------------ARGM---------------GIRS 139 (176)
T ss_dssp ESSCHHHHHHHHHHTTCTTTSEEEECTTCHHHHHHTCEEECG---------------GGTC---------------CEEE
T ss_pred eCCCHHHHHHHHHHhCCCCCceEEEcCchHHHHHhCCCcccc---------------ccCC---------------Cccc
Confidence 999999999999987655 4 99999999999975421 0000 1124
Q ss_pred eceEEEEeCCCCeEEEEEeCCCC-CCCCCHHHHHHHhhC
Q 025756 211 QGGIIVAGPGKSNISYIHRDKEA-GDDPDIQDILKACCS 248 (248)
Q Consensus 211 lgG~fVvd~gg~~I~~~h~~~~~-~Dh~~i~eIL~al~~ 248 (248)
.+++||| ++| +|+|.++.... .+..+.+++|++|+|
T Consensus 140 ~R~tfII-~dG-~I~~~~~~~~~~~~~~~a~~vL~~Lk~ 176 (176)
T 4f82_A 140 LRYAMVI-DGG-VVKTLAVEAPGKFEVSDAASVLATLTS 176 (176)
T ss_dssp CCEEEEE-ETT-EEEEEEECCTTCCSSSSHHHHHHTCCC
T ss_pred ccEEEEE-cCC-EEEEEEEcCCCCcchhhHHHHHHHhhC
Confidence 5789999 887 99999998622 255689999999876
No 19
>3keb_A Probable thiol peroxidase; structural genomics, APC40679, PSI-2, Pro structure initiative; HET: MSE; 1.80A {Chromobacterium violaceum}
Probab=99.90 E-value=8.7e-23 Score=177.70 Aligned_cols=142 Identities=11% Similarity=0.086 Sum_probs=122.7
Q ss_pred CCccccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChhhH-----HHHHHHHhcHHHHHHCCCEEEEEeCCCH
Q 025756 67 VSEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCR-----KRADYLAAKKDVMDASGVALVLIGPGSV 141 (248)
Q Consensus 67 ~~~~~g~~ap~f~L~d~~G~~v~l~~l~~~~~vvlvF~R~~~Cp~C~-----~~l~~L~~~~~~l~~~Gv~vV~Is~~~~ 141 (248)
...++|++||+|+|.|.+|+.++|+++ .++++||+||+.+|||+|. .+++.|++. | .|+.||+||.|++
T Consensus 20 ~~l~vG~~APdFtL~d~~G~~vsLsd~-~Gk~vVL~F~ps~~cp~C~~~~~~~El~~~~~~---~--~gv~VvgIS~Ds~ 93 (224)
T 3keb_A 20 DFPRKGDYLPSFMLVDDQKHDAALESF-SHTPKLIVTLLSVDEDEHAGLLLLRETRRFLDS---W--PHLKLIVITVDSP 93 (224)
T ss_dssp CCCCTTCBCCCCEEEETTSCEEEGGGG-TTCCEEEEECSCTTCSTTTSHHHHHHHHHHHTT---C--TTSEEEEEESSCH
T ss_pred CcCCCCCCCCCeEEECCCCCEEeHHHh-CCCcEEEEEEeCCCCCCCCCCccHHHHHHHHHH---c--CCCEEEEEECCCH
Confidence 346899999999999999999999995 5678999999999999999 999999988 4 7999999999999
Q ss_pred HHHHHHHhhcCC---CC--CC-ChHHHHHcCCccccccccCchhhHHHHHHHHhhhhhhccccccccccCCCceeeceEE
Q 025756 142 EQARTFSEQTKF---KG--DP-NHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGII 215 (248)
Q Consensus 142 ~~~~~f~~~~~f---p~--Dp-~~~~y~alGl~~~~~~~~~P~a~~~~~k~~~~g~~~~~~~~~~g~~~~~~~~qlgG~f 215 (248)
+.+++|++++++ |+ |+ +.++.++||+..... | +. ++..|++|
T Consensus 94 ~~~~~f~~~~gl~~fplLsD~~~~~vak~yGv~~~~~----~---------------------~~-------G~~~p~tf 141 (224)
T 3keb_A 94 SSLARARHEHGLPNIALLSTLRGRDFHKRYGVLITEY----P---------------------LS-------GYTSPAII 141 (224)
T ss_dssp HHHHHHHHHHCCTTCEEEESTTCTTHHHHTTCBCCST----T---------------------ST-------TCBCCEEE
T ss_pred HHHHHHHHHcCCCCceEEEcCCchHHHHHhCCccccc----c---------------------cc-------CCccCEEE
Confidence 999999998775 33 99 699999999974320 0 00 13467999
Q ss_pred EEeCCCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025756 216 VAGPGKSNISYIHRDKEAGDDPDIQDILKACC 247 (248)
Q Consensus 216 Vvd~gg~~I~~~h~~~~~~Dh~~i~eIL~al~ 247 (248)
|||++| +|+|.++..++.++|+++++|++++
T Consensus 142 vID~dG-~I~~~~~~~~~~~~pd~~evl~~L~ 172 (224)
T 3keb_A 142 LADAAN-VVHYSERLANTRDFFDFDAIEKLLQ 172 (224)
T ss_dssp EECTTC-BEEEEEECSBTTCCCCHHHHHHHHH
T ss_pred EEcCCC-EEEEEEecCCCCCCCCHHHHHHHHH
Confidence 999998 9999999999999999999999885
No 20
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=99.89 E-value=4.2e-23 Score=171.58 Aligned_cols=149 Identities=11% Similarity=0.048 Sum_probs=122.5
Q ss_pred CCCccccCc----CCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCCH
Q 025756 66 SVSEDTKNL----LDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV 141 (248)
Q Consensus 66 ~~~~~~g~~----ap~f~L~d~~G~~v~l~~l~~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~~ 141 (248)
...+++|+. +|+|++.|.+|+.++|+++. ++++||+|++..||+.|+.++.+|++.++++++.|++||+|+.|+.
T Consensus 18 ~~~l~~Gd~ig~~aP~f~l~~~~G~~v~l~d~~-Gk~vvl~f~~~~~c~~C~~el~~l~~l~~~~~~~~~~vv~Vs~D~~ 96 (179)
T 3ixr_A 18 GSHMNIGDTLNHSLLNHPLMLSGSTCKTLSDYT-NQWLVLYFYPKDNTPGSSTEGLEFNLLLPQFEQINATVLGVSRDSV 96 (179)
T ss_dssp CCSSCTTCBCCHHHHHCCEEEGGGEEECGGGGT-TSEEEEEECSCTTSHHHHHHHHHHHHHHHHHHTTTEEEEEEESCCH
T ss_pred CcccCcCcccCCcCCCeeEECCCCCEEeHHHHC-CCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEcCCCH
Confidence 345677777 99999999999999999975 4588898989999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcC--CCC--CCChHHHHHcCCccccccccCchhhHHHHHHHHhhhhhhccccccccccCCCceeeceEEEE
Q 025756 142 EQARTFSEQTK--FKG--DPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVA 217 (248)
Q Consensus 142 ~~~~~f~~~~~--fp~--Dp~~~~y~alGl~~~~~~~~~P~a~~~~~k~~~~g~~~~~~~~~~g~~~~~~~~qlgG~fVv 217 (248)
+.+++|+++++ ||+ |++.+++++||+...... .|. ......|++|||
T Consensus 97 ~~~~~~~~~~~~~f~~l~D~~~~~~~~~gv~~~~~~--------------------------~g~---~~~~~~p~~~lI 147 (179)
T 3ixr_A 97 KSHDSFCAKQGFTFPLVSDSDAILCKAFDVIKEKTM--------------------------YGR---QVIGIERSTFLI 147 (179)
T ss_dssp HHHHHHHHHHTCCSCEEECTTCHHHHHTTCEEEECC--------------------------C-----CEEEECCEEEEE
T ss_pred HHHHHHHHHcCCceEEEECCchHHHHHcCCcccccc--------------------------cCc---ccCCcceEEEEE
Confidence 99999999877 555 999999999999753210 000 000136799999
Q ss_pred eCCCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025756 218 GPGKSNISYIHRDKEAGDDPDIQDILKACC 247 (248)
Q Consensus 218 d~gg~~I~~~h~~~~~~Dh~~i~eIL~al~ 247 (248)
|++| +|++.|.+ ......+++|+++++
T Consensus 148 D~~G-~I~~~~~~--~~~~~~~~~il~~l~ 174 (179)
T 3ixr_A 148 GPTH-RIVEAWRQ--VKVPGHAEEVLNKLK 174 (179)
T ss_dssp CTTS-BEEEEECS--CCSTTHHHHHHHHHH
T ss_pred CCCC-EEEEEEcC--CCCCCCHHHHHHHHH
Confidence 9998 99999944 455667889988775
No 21
>2xhf_A Peroxiredoxin 5; oxidoreductase, antioxidant enzymes; 1.30A {Alvinella pompejana}
Probab=99.89 E-value=3.9e-23 Score=173.02 Aligned_cols=148 Identities=11% Similarity=0.029 Sum_probs=120.9
Q ss_pred CccccCcCCCcEEecCCC-CeEeCCCccCCCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCE-EEEEeCCCHHHHH
Q 025756 68 SEDTKNLLDTVKVYDVNG-NAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVA-LVLIGPGSVEQAR 145 (248)
Q Consensus 68 ~~~~g~~ap~f~L~d~~G-~~v~l~~l~~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~-vV~Is~~~~~~~~ 145 (248)
..++|++||+|+|.+.++ +.++|+++++++++||+||++.|||.|..|++.+++.+++|++.|++ |++||.+++...+
T Consensus 13 ~~~vGd~aPdf~l~~~g~~~~v~L~d~~~gk~vVL~fyP~~fTp~Ct~e~~~f~~~~~ef~~~gv~~VigIS~D~~~~~~ 92 (171)
T 2xhf_A 13 PIKVGDIIPDVLVYEDVPSKSFPIHDVFRGRKGILFSVVGAFVPGSNNHIPEYLSLYDKFKEEGYHTIACIAVNDPFVMA 92 (171)
T ss_dssp CCCTTCBCCCCEEECSSTTCEEETHHHHTTSEEEEEECSCTTCTTTTSSHHHHHHTHHHHHHTTCCEEEEEESSCHHHHH
T ss_pred cccCcCCCCCeEEecCCCCcEEEhHHHhCCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCCEEEEEeCCCHHHHH
Confidence 468999999999995432 89999998778899999999999999999999999999999999996 9999999999999
Q ss_pred HHHhhcCC----CC--CCChHHHHHcCCccccccccCchhhHHHHHHHHhhhhhhccccccccccCCCceeeceEEEEeC
Q 025756 146 TFSEQTKF----KG--DPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGP 219 (248)
Q Consensus 146 ~f~~~~~f----p~--Dp~~~~y~alGl~~~~~~~~~P~a~~~~~k~~~~g~~~~~~~~~~g~~~~~~~~qlgG~fVvd~ 219 (248)
+|+++.+. |+ |++.++.++||+..... . . |. +....+++||||
T Consensus 93 ~w~~~~~~~~~f~lLSD~~~~~a~ayGv~~~~~----------~----~-g~---------------g~~~~R~tfvId- 141 (171)
T 2xhf_A 93 AWGKTVDPEHKIRMLADMHGEFTRALGTELDSS----------K----M-LG---------------NNRSRRYAMLID- 141 (171)
T ss_dssp HHHHHHCTTCCSEEEECTTSHHHHHHTCBCCCH----------H----H-HS---------------SCCBCCEEEEEE-
T ss_pred HHHHhcCCCCCeEEEEeCCchHHHHhCCceecc----------c----c-CC---------------CcceEEEEEEEe-
Confidence 99987654 44 99999999999984421 0 0 00 012356799999
Q ss_pred CCCeEEEEEeCCCCC--CCCCHHHHHHHhh
Q 025756 220 GKSNISYIHRDKEAG--DDPDIQDILKACC 247 (248)
Q Consensus 220 gg~~I~~~h~~~~~~--Dh~~i~eIL~al~ 247 (248)
+| +|+|.++..++. .+.+.++||++++
T Consensus 142 dG-~V~~~~v~~~~~~~~~s~a~~vL~~~~ 170 (171)
T 2xhf_A 142 DN-KIRSVSTEPDITGLACLLSIQRQKENK 170 (171)
T ss_dssp TT-EEEEEEETTSCSHHHHHHHHHHC----
T ss_pred CC-EEEEEEEeCCCCcccCCCHHHHHHHhc
Confidence 87 999999987776 4567899998875
No 22
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=99.89 E-value=8e-22 Score=158.83 Aligned_cols=142 Identities=15% Similarity=0.188 Sum_probs=121.0
Q ss_pred ccccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCCHHHHHHHH
Q 025756 69 EDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFS 148 (248)
Q Consensus 69 ~~~g~~ap~f~L~d~~G~~v~l~~l~~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~~~~~~~f~ 148 (248)
.++|+.+|+|++.|.+|+.++++++.+++++||.|+|+.||+.|+.++..|.+.++++++.|+++|+|+.++.+.+++|+
T Consensus 9 ~~~G~~~p~f~l~~~~G~~~~l~~~~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~~~vv~is~d~~~~~~~~~ 88 (160)
T 1xvw_A 9 LNVGATAPDFTLRDQNQQLVTLRGYRGAKNVLLVFFPLAFTGICQGELDQLRDHLPEFENDDSAALAISVGPPPTHKIWA 88 (160)
T ss_dssp CCTTSBCCCCEEECTTSCEEEGGGGTTTCEEEEEECSCTTSSHHHHHHHHHHHTGGGTSSSSEEEEEEESCCHHHHHHHH
T ss_pred CCCCCCCCCeEeEcCCCCEEeHHHhcCCCCEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCcEEEEEeCCCHHHHHHHH
Confidence 78999999999999999999999985544777777789999999999999999999998889999999999999999999
Q ss_pred hhcC--CCC--C--CChHHHHHcCCccccccccCchhhHHHHHHHHhhhhhhccccccccccCCCceeeceEEEEeCCCC
Q 025756 149 EQTK--FKG--D--PNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGPGKS 222 (248)
Q Consensus 149 ~~~~--fp~--D--p~~~~y~alGl~~~~~~~~~P~a~~~~~k~~~~g~~~~~~~~~~g~~~~~~~~qlgG~fVvd~gg~ 222 (248)
++++ ||+ | ++.++++.||+.... .++..+.+||||++|
T Consensus 89 ~~~~~~~~~~~d~~~~~~~~~~~~v~~~~-----------------------------------~~~p~~~~~lid~~G- 132 (160)
T 1xvw_A 89 TQSGFTFPLLSDFWPHGAVSQAYGVFNEQ-----------------------------------AGIANRGTFVVDRSG- 132 (160)
T ss_dssp HHHTCCSCEEECTTTTTHHHHHTTCEETT-----------------------------------TTEECSEEEEECTTS-
T ss_pred HhcCCCceEEecCCcChHHHHHcCCcccc-----------------------------------CCCeeeeEEEECCCC-
Confidence 9877 444 8 488899888876321 012344899999998
Q ss_pred eEEEEEeCCCCCCCCCHHHHHHHhh
Q 025756 223 NISYIHRDKEAGDDPDIQDILKACC 247 (248)
Q Consensus 223 ~I~~~h~~~~~~Dh~~i~eIL~al~ 247 (248)
+|++.|.+. ..+.+++++++++++
T Consensus 133 ~i~~~~~g~-~~~~~~~~~l~~~l~ 156 (160)
T 1xvw_A 133 IIRFAEMKQ-PGEVRDQRLWTDALA 156 (160)
T ss_dssp BEEEEEECC-TTCCCCHHHHHHHHH
T ss_pred eEEEEEecC-CCCCCCHHHHHHHHH
Confidence 999999985 677789999998875
No 23
>2v2g_A Peroxiredoxin 6; oxidoreductase, antioxidant enzymes; 1.60A {Arenicola marina} PDB: 2v32_A 2v41_A
Probab=99.89 E-value=2.1e-22 Score=175.74 Aligned_cols=147 Identities=12% Similarity=0.101 Sum_probs=121.1
Q ss_pred ccccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCCHHHHHHHH
Q 025756 69 EDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFS 148 (248)
Q Consensus 69 ~~~g~~ap~f~L~d~~G~~v~l~~l~~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~~~~~~~f~ 148 (248)
+++|+.+|+|++.|.+| .++|+++.+++++||+|+++.|||+|+.++.+|++.+++|++.|++||+|+.|+.+.+++|+
T Consensus 3 l~iG~~aPdF~l~~~~G-~v~l~d~~Gk~~vvL~f~pa~~cpvC~~el~~l~~l~~ef~~~~v~vigIS~D~~~~~~~~~ 81 (233)
T 2v2g_A 3 ITLGEVFPNFEADSTIG-KLKFHDWLGNSWGVLFSHPRDFTPVSTTELGRVIQLEGDFKKRGVKLIALSCDNVADHKEWS 81 (233)
T ss_dssp CCTTCBCCCCEEEETTC-CEEHHHHHCSSEEEEEECSCSSCHHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHH
T ss_pred CCCCCCCCCcEEecCCC-CEEHHHHCCCCeEEEEEECCCCCCCcHHHHHHHHHHHHHHHHcCCEEEEEcCCCHHHHHHHH
Confidence 57899999999999999 99999987655888888889999999999999999999999999999999999999999999
Q ss_pred h------hc--C--CCC--CCChHHHHHcCCccccccccCchhhHHHHHHHHhhhhhhccccccccccCCCceeeceEEE
Q 025756 149 E------QT--K--FKG--DPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIV 216 (248)
Q Consensus 149 ~------~~--~--fp~--Dp~~~~y~alGl~~~~~~~~~P~a~~~~~k~~~~g~~~~~~~~~~g~~~~~~~~qlgG~fV 216 (248)
+ ++ + ||+ |+++++.++||+...... .+ .+.....+++||
T Consensus 82 ~~i~~~~~~~~~~~fpil~D~~~~va~~ygv~~~~~~--------------------------~~---~g~~~~~p~~fi 132 (233)
T 2v2g_A 82 EDVKCLSGVKGDMPYPIIADETRELAVKLGMVDPDER--------------------------TS---TGMPLTCRAVFI 132 (233)
T ss_dssp HHHHHHHTCCSSCSSCEEECTTCHHHHHTTCEEEEEE--------------------------CT---TCCEEECEEEEE
T ss_pred HHHHHhhCcccCCceEEEECChHHHHHHhCCcCcccc--------------------------cC---CCcccccceEEE
Confidence 8 34 4 676 999999999998643210 00 011245789999
Q ss_pred EeCCCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025756 217 AGPGKSNISYIHRDKEAGDDPDIQDILKACC 247 (248)
Q Consensus 217 vd~gg~~I~~~h~~~~~~Dh~~i~eIL~al~ 247 (248)
||++| +|++.+.......+ +++|||+++.
T Consensus 133 ID~~G-~I~~~~~~~~~~gr-~~~eilr~l~ 161 (233)
T 2v2g_A 133 IGPDK-KLKLSILYPATTGR-NFSEILRVID 161 (233)
T ss_dssp ECTTS-BEEEEEEECTTBCC-CHHHHHHHHH
T ss_pred ECCCC-EEEEEEecCCCCCC-CHHHHHHHHH
Confidence 99998 99999986543333 6889988775
No 24
>1prx_A HORF6; peroxiredoxin, hydrogen peroxide, redox regulation, cellular signaling, antioxidant; 2.00A {Homo sapiens} SCOP: c.47.1.10
Probab=99.88 E-value=3.7e-22 Score=172.77 Aligned_cols=148 Identities=16% Similarity=0.131 Sum_probs=121.8
Q ss_pred CccccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCCHHHHHHH
Q 025756 68 SEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTF 147 (248)
Q Consensus 68 ~~~~g~~ap~f~L~d~~G~~v~l~~l~~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~~~~~~~f 147 (248)
..++|+.+|+|++.|.+| .++|+++.+++++||+||++.|||+|+.++.+|++.+++|++.|++||+|+.|+.+.+++|
T Consensus 4 ~l~~G~~aP~F~l~~~~G-~v~l~d~~Gk~~vvL~~~~a~~cp~C~~el~~l~~l~~~f~~~~v~vi~IS~D~~~~~~~~ 82 (224)
T 1prx_A 4 GLLLGDVAPNFEANTTVG-RIRFHDFLGDSWGILFSHPRDFTPVCTTELGRAAKLAPEFAKRNVKLIALSIDSVEDHLAW 82 (224)
T ss_dssp -CCTTCBCCCCEEEETTE-EEEHHHHHTTSEEEEEEESCSSCHHHHHHHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHH
T ss_pred cCCCcCCCCCcEEecCCC-CEEHHHHcCCCeEEEEEECCCCCCCcHHHHHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHH
Confidence 357899999999999999 9999998766689999999999999999999999999999999999999999999888888
Q ss_pred Hhh----------cC--CCC--CCChHHHHHcCCccccccccCchhhHHHHHHHHhhhhhhccccccccccCCCceeece
Q 025756 148 SEQ----------TK--FKG--DPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGG 213 (248)
Q Consensus 148 ~~~----------~~--fp~--Dp~~~~y~alGl~~~~~~~~~P~a~~~~~k~~~~g~~~~~~~~~~g~~~~~~~~qlgG 213 (248)
.+. .+ ||+ |+++++.++||+...... .+ .+.....++
T Consensus 83 ~~~i~~~~~~~~~~~~~fpil~D~~~~va~~ygv~~~~~~--------------------------~~---~g~~~~~p~ 133 (224)
T 1prx_A 83 SKDINAYNSEEPTEKLPFPIIDDRNRELAILLGMLDPAEK--------------------------DE---KGMPVTARV 133 (224)
T ss_dssp HHHHHHHTTSCCCSCCSSCEEECTTCHHHHHTTSSCSCTT--------------------------CS---SSCCTTCCE
T ss_pred HHHHHHhhCcccccCcCcceeecCchHHHHHhCCCCcccc--------------------------cC---CCccccceE
Confidence 875 44 666 999999999998643110 00 000134789
Q ss_pred EEEEeCCCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025756 214 IIVAGPGKSNISYIHRDKEAGDDPDIQDILKACC 247 (248)
Q Consensus 214 ~fVvd~gg~~I~~~h~~~~~~Dh~~i~eIL~al~ 247 (248)
+||||++| +|++.+.......+ +.+||++++.
T Consensus 134 ~fiID~~G-~I~~~~~~~~~~gr-~~~eil~~i~ 165 (224)
T 1prx_A 134 VFVFGPDK-KLKLSILYPATTGR-NFDEILRVVI 165 (224)
T ss_dssp EEEECTTS-BEEEEEECCTTBCC-CHHHHHHHHH
T ss_pred EEEECCCC-EEEEEEecCCCCCC-CHHHHHHHHH
Confidence 99999998 99999987544333 6889988764
No 25
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=99.88 E-value=4.5e-22 Score=172.28 Aligned_cols=147 Identities=14% Similarity=0.152 Sum_probs=123.8
Q ss_pred ccccCcCCCcEEecC-CCC--eEeCCCccCCCeEEEEEEcCCCChhhH-HHHHHHHhcHHHHHHCCC-EEEEEeCCCHHH
Q 025756 69 EDTKNLLDTVKVYDV-NGN--AIPISDLWKDRKAVVAFARHFGCVLCR-KRADYLAAKKDVMDASGV-ALVLIGPGSVEQ 143 (248)
Q Consensus 69 ~~~g~~ap~f~L~d~-~G~--~v~l~~l~~~~~vvlvF~R~~~Cp~C~-~~l~~L~~~~~~l~~~Gv-~vV~Is~~~~~~ 143 (248)
.++|+++|+|++.|. +|+ .++|+++++++++||.|+|+.|||.|+ .|+..|++.+++|++.|+ +||+|+.++.+.
T Consensus 3 ~~~G~~aP~f~l~~~~~g~~~~v~l~~~~~gk~vvl~f~~a~~cp~C~~~e~~~l~~~~~~~~~~~~~~vv~is~d~~~~ 82 (241)
T 1nm3_A 3 SMEGKKVPQVTFRTRQGDKWVDVTTSELFDNKTVIVFSLPGAFTPTCSSSHLPRYNELAPVFKKYGVDDILVVSVNDTFV 82 (241)
T ss_dssp CCTTSBCCCCEEEEEETTEEEEEEHHHHHTTSEEEEEEESCSSCHHHHHTHHHHHHHHHHHHHHTTCCEEEEEESSCHHH
T ss_pred ccCCCCCCCeEEEcccCCCceeecHHHHhCCCeEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEcCCHHH
Confidence 468999999999996 777 999999556678889899999999999 999999999999999999 999999999999
Q ss_pred HHHHHhhcC---CCC--CCChHHHHHcCCccccccccCchhhHHHHHHHHhhhhhhccccccccccCCCceeeceEEEEe
Q 025756 144 ARTFSEQTK---FKG--DPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAG 218 (248)
Q Consensus 144 ~~~f~~~~~---fp~--Dp~~~~y~alGl~~~~~~~~~P~a~~~~~k~~~~g~~~~~~~~~~g~~~~~~~~qlgG~fVvd 218 (248)
+++|+++++ ||+ |++.++.++||+...... .|+ +....|++|||
T Consensus 83 ~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~~---------------~g~---------------~~~~~p~t~li- 131 (241)
T 1nm3_A 83 MNAWKEDEKSENISFIPDGNGEFTEGMGMLVGKED---------------LGF---------------GKRSWRYSMLV- 131 (241)
T ss_dssp HHHHHHHTTCTTSEEEECTTSHHHHHTTCEEECTT---------------TTC---------------CEEECCEEEEE-
T ss_pred HHHHHHhcCCCceEEEECCCcHHHHHhCceeeccc---------------ccC---------------cccceeEEEEE-
Confidence 999999876 444 999999999998743210 000 00246789999
Q ss_pred CCCCeEEEEEeCCCCCCC----CCHHHHHHHhh
Q 025756 219 PGKSNISYIHRDKEAGDD----PDIQDILKACC 247 (248)
Q Consensus 219 ~gg~~I~~~h~~~~~~Dh----~~i~eIL~al~ 247 (248)
++| +|+|.|++..+.++ .+++++|+++.
T Consensus 132 ~~G-~i~~~~~~~~~~~~~~~~~~~~~il~~l~ 163 (241)
T 1nm3_A 132 KNG-VVEKMFIEPNEPGDPFKVSDADTMLKYLA 163 (241)
T ss_dssp ETT-EEEEEEECCSCSSCCCSSSSHHHHHHHHC
T ss_pred ECC-EEEEEEEeccCCCccceecCHHHHHHHhh
Confidence 887 99999999877765 78999999875
No 26
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=99.88 E-value=7.1e-22 Score=170.67 Aligned_cols=141 Identities=11% Similarity=0.084 Sum_probs=118.9
Q ss_pred ccccCcCCCcEEecC--CC--CeEeCCCccCCCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCCHHHH
Q 025756 69 EDTKNLLDTVKVYDV--NG--NAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQA 144 (248)
Q Consensus 69 ~~~g~~ap~f~L~d~--~G--~~v~l~~l~~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~~~~~ 144 (248)
.++|+.+|+|++.|. +| +.++|+++++++++||.|++..|||+|+.++..|++.+++|++.|++||+|+.|+.+.+
T Consensus 25 l~~G~~aP~F~l~~~~~~G~~~~v~L~d~~~Gk~vvl~F~patwCp~C~~e~p~l~~l~~~~~~~~v~vv~Is~D~~~~~ 104 (221)
T 2c0d_A 25 SLVTKKAYNFTAQGLNKNNEIINVDLSSFIGQKYCCLLFYPLNYTFVCPTEIIEFNKHIKDFENKNVELLGISVDSVYSH 104 (221)
T ss_dssp -CTTSBCCCCEEEEECTTSCEEEEEGGGGTTTCEEEEEECCCCTTTCCHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHH
T ss_pred CCCCCCCCCeEEeccccCCCccEEeHHHHcCCCeEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHH
Confidence 578999999999999 99 99999998556677777777999999999999999999999999999999999999999
Q ss_pred HHHHhhc-------C--CCC--CCChHHHHHcCCccccccccCchhhHHHHHHHHhhhhhhccccccccccCCCceeece
Q 025756 145 RTFSEQT-------K--FKG--DPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGG 213 (248)
Q Consensus 145 ~~f~~~~-------~--fp~--Dp~~~~y~alGl~~~~~~~~~P~a~~~~~k~~~~g~~~~~~~~~~g~~~~~~~~qlgG 213 (248)
++|++++ + ||+ |++.++.++||+. ... | ...|.
T Consensus 105 ~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~~ygv~-~~~----------------------------g-------~~~P~ 148 (221)
T 2c0d_A 105 LAWKNMPIEKGGIGNVEFTLVSDINKDISKNYNVL-YDN----------------------------S-------FALRG 148 (221)
T ss_dssp HHHHHSCGGGTCCCSCSSEEEECTTSHHHHHTTCE-ETT----------------------------T-------EECEE
T ss_pred HHHHHHhhhhcCccCCceEEEECCchHHHHHcCCc-ccC----------------------------C-------Cccce
Confidence 9999876 4 555 9999999999986 310 0 23578
Q ss_pred EEEEeCCCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025756 214 IIVAGPGKSNISYIHRDKEAGDDPDIQDILKACC 247 (248)
Q Consensus 214 ~fVvd~gg~~I~~~h~~~~~~Dh~~i~eIL~al~ 247 (248)
+||||++| +|+|.+.+.. ...++.++|+++++
T Consensus 149 ~~lID~~G-~I~~~~~g~~-~~~~~~~ell~~l~ 180 (221)
T 2c0d_A 149 LFIIDKNG-CVRHQTVNDL-PIGRNVQEVLRTID 180 (221)
T ss_dssp EEEECTTS-BEEEEEEECT-TCCCCHHHHHHHHH
T ss_pred EEEECCCC-eEEEEEecCC-CCCCCHHHHHHHHH
Confidence 99999998 9999998754 34468889888764
No 27
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=99.87 E-value=1.2e-21 Score=163.90 Aligned_cols=140 Identities=16% Similarity=0.134 Sum_probs=115.9
Q ss_pred cccCcCCCcEEecC-CC--CeEeCCCccCCCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCCHHHHHH
Q 025756 70 DTKNLLDTVKVYDV-NG--NAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQART 146 (248)
Q Consensus 70 ~~g~~ap~f~L~d~-~G--~~v~l~~l~~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~~~~~~~ 146 (248)
++|+.+|+|++.|. +| +.++|+++. ++++||.|+++.|||+|+.++.+|++.+++|++.|++||+|+.++.+.+++
T Consensus 2 ~~G~~aP~f~l~~~~~G~~~~v~l~~~~-Gk~vvl~F~~~~~Cp~C~~e~~~l~~~~~~~~~~~v~vv~Is~d~~~~~~~ 80 (186)
T 1n8j_A 2 LINTKIKPFKNQAFKNGEFIEVTEKDTE-GRWSVFFFYPADFTFVSPTELGDVADHYEELQKLGVDVYSVSTDTHFTHKA 80 (186)
T ss_dssp CTTCBCCCCEEEEEETTEEEEEEHHHHT-TSEEEEEECSCTTCSHHHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHH
T ss_pred CCCCcCCCcEeecccCCcceEEEHHHHC-CCeEEEEEECCCCCCccHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHH
Confidence 57999999999999 59 899999974 456666666689999999999999999999999999999999999999999
Q ss_pred HHhhc----C--CCC--CCChHHHHHcCCccccccccCchhhHHHHHHHHhhhhhhccccccccccCCCceeeceEEEEe
Q 025756 147 FSEQT----K--FKG--DPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAG 218 (248)
Q Consensus 147 f~~~~----~--fp~--Dp~~~~y~alGl~~~~~~~~~P~a~~~~~k~~~~g~~~~~~~~~~g~~~~~~~~qlgG~fVvd 218 (248)
|++++ + ||+ |++.+++++||+..... ++..|.+||||
T Consensus 81 ~~~~~~~~~~~~fp~l~D~~~~~~~~ygv~~~~~-----------------------------------g~~~p~~~lID 125 (186)
T 1n8j_A 81 WHSSSETIAKIKYAMIGDPTGALTRNFDNMREDE-----------------------------------GLADRATFVVD 125 (186)
T ss_dssp HHHHCTTGGGCCSEEEECTTSHHHHHTTCEETTT-----------------------------------TEECEEEEEEC
T ss_pred HHHHcCcccCCceeEEECCchHHHHHhCCccCCC-----------------------------------CceeeEEEEEC
Confidence 99887 5 455 99999999999863210 12357899999
Q ss_pred CCCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025756 219 PGKSNISYIHRDKEAGDDPDIQDILKACC 247 (248)
Q Consensus 219 ~gg~~I~~~h~~~~~~Dh~~i~eIL~al~ 247 (248)
++| +|++.|.+....+ .+.++++++++
T Consensus 126 ~~G-~i~~~~~~~~~~~-~~~~~l~~~l~ 152 (186)
T 1n8j_A 126 PQG-IIQAIEVTAEGIG-RDASDLLRKIK 152 (186)
T ss_dssp TTS-BEEEEEEECTTBC-CCHHHHHHHHH
T ss_pred CCC-eEEEEEecCCCCC-CCHHHHHHHHH
Confidence 998 9999998754322 35788887764
No 28
>1xcc_A 1-Cys peroxiredoxin; unknown function, structural genomics, structural genomics consortium, SGC; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10 PDB: 3tb2_A
Probab=99.87 E-value=1.1e-21 Score=169.46 Aligned_cols=147 Identities=11% Similarity=0.038 Sum_probs=120.2
Q ss_pred ccccCcCCCcEEecC--CCCeEeCCCccCCCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCCHHHHHH
Q 025756 69 EDTKNLLDTVKVYDV--NGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQART 146 (248)
Q Consensus 69 ~~~g~~ap~f~L~d~--~G~~v~l~~l~~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~~~~~~~ 146 (248)
.++|+.+|+|++.|. +| .++|+++.+++++||+||++.|||+|..++.+|++.+++|++.|++||+|+.|+.+.+++
T Consensus 3 l~iG~~aP~F~l~~~~~~G-~v~l~d~~Gk~~vvL~f~~a~~cp~C~~el~~l~~l~~~f~~~~v~vi~vS~D~~~~~~~ 81 (220)
T 1xcc_A 3 YHLGATFPNFTAKASGIDG-DFELYKYIENSWAILFSHPNDFTPVCTTELAELGKMHEDFLKLNCKLIGFSCNSKESHDK 81 (220)
T ss_dssp CCTTCBCCCCEECBTTCSS-CEEHHHHTTTSEEEEECCSCTTCHHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHH
T ss_pred CCCCCCCCCcEeecccCCC-cEeHHHHcCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCCHHHHHH
Confidence 578999999999999 99 999999865558999999999999999999999999999999999999999999988888
Q ss_pred HHh-------hcC--CCC--CCChHHHHHcCCccccccccCchhhHHHHHHHHhhhhhhccccccccccCCCceeeceEE
Q 025756 147 FSE-------QTK--FKG--DPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGII 215 (248)
Q Consensus 147 f~~-------~~~--fp~--Dp~~~~y~alGl~~~~~~~~~P~a~~~~~k~~~~g~~~~~~~~~~g~~~~~~~~qlgG~f 215 (248)
|.+ +.+ ||+ |+++++.++||+...... .+ .+.....+++|
T Consensus 82 ~~~~i~~~~~~~~~~fpil~D~~~~va~~ygv~~~~~~--------------------------~~---~g~~~~~p~~f 132 (220)
T 1xcc_A 82 WIEDIKYYGKLNKWEIPIVCDESRELANKLKIMDEQEK--------------------------DI---TGLPLTCRCLF 132 (220)
T ss_dssp HHHHHHHHHTCSCCCCCEEECTTSHHHHHHTCEEEEEE--------------------------CT---TSCEEECEEEE
T ss_pred HHHHHHHHhcCCCCcceeEECchhHHHHHhCCCCcccc--------------------------cC---CCCCcccceEE
Confidence 887 344 666 999999999998643210 00 01113578999
Q ss_pred EEeCCCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025756 216 VAGPGKSNISYIHRDKEAGDDPDIQDILKACC 247 (248)
Q Consensus 216 Vvd~gg~~I~~~h~~~~~~Dh~~i~eIL~al~ 247 (248)
|||++| +|++.+....... .+.+||++++.
T Consensus 133 lID~~G-~I~~~~~~~~~~g-~~~~ell~~i~ 162 (220)
T 1xcc_A 133 FISPEK-KIKATVLYPATTG-RNAHEILRVLK 162 (220)
T ss_dssp EECTTS-BEEEEEEECTTBC-CCHHHHHHHHH
T ss_pred EECCCC-EEEEEEecCCCCC-CCHHHHHHHHH
Confidence 999998 9999998654333 37888888764
No 29
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=99.87 E-value=4.7e-21 Score=164.12 Aligned_cols=143 Identities=10% Similarity=0.038 Sum_probs=119.9
Q ss_pred CCccccCcCCCcEEecC--CC--CeEeCCCccCCCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCCHH
Q 025756 67 VSEDTKNLLDTVKVYDV--NG--NAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVE 142 (248)
Q Consensus 67 ~~~~~g~~ap~f~L~d~--~G--~~v~l~~l~~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~~~ 142 (248)
...++|+++|+|++.|. +| +.++|+++++++++||.|++..||++|+.++..|++.+++|++.|++||+|+.|+.+
T Consensus 19 ~~l~~G~~aP~f~l~~~~~~G~~~~v~l~d~~~gk~vvl~F~pa~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~D~~~ 98 (213)
T 2i81_A 19 SPTYVGKEAPFFKAEAVFGDNSFGEVNLTQFIGKKYVLLYFYPLDFTFVCPSEIIALDKALDAFHERNVELLGCSVDSKY 98 (213)
T ss_dssp -CCCBTSBCCCCEEEEECTTSCEEEEEGGGGTTTCEEEEEECSCTTSSHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHH
T ss_pred ccccCCCcCCCeEeeccccCCceeEEeHHHHcCCCeEEEEEEcCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCCHH
Confidence 45689999999999999 89 899999985667777777779999999999999999999999999999999999999
Q ss_pred HHHHHHhhc-------C--CCC--CCChHHHHHcCCccccccccCchhhHHHHHHHHhhhhhhccccccccccCCCceee
Q 025756 143 QARTFSEQT-------K--FKG--DPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQ 211 (248)
Q Consensus 143 ~~~~f~~~~-------~--fp~--Dp~~~~y~alGl~~~~~~~~~P~a~~~~~k~~~~g~~~~~~~~~~g~~~~~~~~ql 211 (248)
.+++|++.+ + ||+ |++.++.++||+.... +...
T Consensus 99 ~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~~ygv~~~~------------------------------------g~~~ 142 (213)
T 2i81_A 99 THLAWKKTPLAKGGIGNIKHTLLSDITKSISKDYNVLFDD------------------------------------SVSL 142 (213)
T ss_dssp HHHHHHSSCGGGTCCCSCSSEEEECTTSHHHHHTTCEETT------------------------------------TEEC
T ss_pred HHHHHHHHHHhhCCccCCCceEEECCchHHHHHhCCcccc------------------------------------CCcc
Confidence 999999866 4 555 9999999999987410 0235
Q ss_pred ceEEEEeCCCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025756 212 GGIIVAGPGKSNISYIHRDKEAGDDPDIQDILKACC 247 (248)
Q Consensus 212 gG~fVvd~gg~~I~~~h~~~~~~Dh~~i~eIL~al~ 247 (248)
|++||||++| +|+|.+.+.... ..+.+++++++.
T Consensus 143 p~~~lID~~G-~i~~~~~~~~~~-~~~~~ell~~l~ 176 (213)
T 2i81_A 143 RAFVLIDMNG-IVQHLLVNNLAI-GRSVDEILRIID 176 (213)
T ss_dssp EEEEEECTTS-BEEEEEEECTTC-CCCHHHHHHHHH
T ss_pred cEEEEECCCC-EEEEEEecCCCC-CCCHHHHHHHHH
Confidence 7899999998 999999875433 347888887764
No 30
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=99.86 E-value=7.5e-22 Score=159.79 Aligned_cols=131 Identities=8% Similarity=0.102 Sum_probs=109.4
Q ss_pred CCCccccCcCCCcEEecCCCCeEeCCCccCCC-eEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCCHHHH
Q 025756 66 SVSEDTKNLLDTVKVYDVNGNAIPISDLWKDR-KAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQA 144 (248)
Q Consensus 66 ~~~~~~g~~ap~f~L~d~~G~~v~l~~l~~~~-~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~~~~~ 144 (248)
....++|+.+|+|++.|.+|+.++++++.+++ ++||.||++.|||.|+.++..|.+.++++++.| +||+|+.++.+.+
T Consensus 4 ~~~~~~G~~~P~f~l~~~~G~~v~l~~~~gk~~~vvl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~-~vv~is~d~~~~~ 82 (159)
T 2a4v_A 4 VNELEIGDPIPDLSLLNEDNDSISLKKITENNRVVVFFVYPRASTPGSTRQASGFRDNYQELKEYA-AVFGLSADSVTSQ 82 (159)
T ss_dssp TTCCCTTCBCCSCEEECTTSCEEEHHHHHHHCSEEEEEECSSSSSHHHHHHHHHHHHHHHHHTTTC-EEEEEESCCHHHH
T ss_pred CCcCCCCCCCCCeEEECCCCCEEeHHHHhCCCCeEEEEEcCCCCCCCHHHHHHHHHHHHHHHHhCC-cEEEEeCCCHHHH
Confidence 34578999999999999999999999987544 466666679999999999999999999999999 9999999999999
Q ss_pred HHHHhhcCCC--C--CCChHHHHHcCCccccccccCchhhHHHHHHHHhhhhhhccccccccccCCCceeeceEEEEeCC
Q 025756 145 RTFSEQTKFK--G--DPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGPG 220 (248)
Q Consensus 145 ~~f~~~~~fp--~--Dp~~~~y~alGl~~~~~~~~~P~a~~~~~k~~~~g~~~~~~~~~~g~~~~~~~~qlgG~fVvd~g 220 (248)
++|+++++++ + |++.+++++||+... |. .| ..+.+||| ++
T Consensus 83 ~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~------p~---------------------~g--------~~~~~~li-~~ 126 (159)
T 2a4v_A 83 KKFQSKQNLPYHLLSDPKREFIGLLGAKKT------PL---------------------SG--------SIRSHFIF-VD 126 (159)
T ss_dssp HHHHHHHTCSSEEEECTTCHHHHHHTCBSS------SS---------------------SC--------BCCEEEEE-ET
T ss_pred HHHHHHhCCCceEEECCccHHHHHhCCccc------cc---------------------CC--------ccceEEEE-cC
Confidence 9999987744 4 999999999998632 10 00 24579999 99
Q ss_pred CCeEEEEEeCCCCC
Q 025756 221 KSNISYIHRDKEAG 234 (248)
Q Consensus 221 g~~I~~~h~~~~~~ 234 (248)
| +|++.|.+..+.
T Consensus 127 G-~i~~~~~g~~~~ 139 (159)
T 2a4v_A 127 G-KLKFKRVKISPE 139 (159)
T ss_dssp T-EEEEEEESCCHH
T ss_pred C-EEEEEEccCCcc
Confidence 8 999999875443
No 31
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=99.86 E-value=3.8e-21 Score=160.62 Aligned_cols=140 Identities=11% Similarity=0.071 Sum_probs=117.1
Q ss_pred cccCcCCCcEEecC--CC--CeEeCCCccCCCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCCHHHHH
Q 025756 70 DTKNLLDTVKVYDV--NG--NAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQAR 145 (248)
Q Consensus 70 ~~g~~ap~f~L~d~--~G--~~v~l~~l~~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~~~~~~ 145 (248)
++|+++|+|++.|. +| +.++|+++++++++||.|+++.||+.|+.++..|++.++++++.|++||+|+.++.+.++
T Consensus 1 ~~G~~aP~f~l~~~~~~G~~~~~~l~~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~Is~d~~~~~~ 80 (192)
T 2h01_A 1 AFQGQAPSFKAEAVFGDNTFGEVSLSDFIGKKYVLLYFYPLDFTFVCPSEIIALDKALDSFKERNVELLGCSVDSKFTHL 80 (192)
T ss_dssp CCSSBCCCCEEEEECTTSCEEEEEGGGGTTTCEEEEEECSCSSCSSCCHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHH
T ss_pred CCCCcCCCcEeEeeecCCceeEEeHHHHcCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEeCCHHHHH
Confidence 47999999999999 99 999999985666777777779999999999999999999999999999999999999999
Q ss_pred HHHhhc-------C--CCC--CCChHHHHHcCCccccccccCchhhHHHHHHHHhhhhhhccccccccccCCCceeeceE
Q 025756 146 TFSEQT-------K--FKG--DPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGI 214 (248)
Q Consensus 146 ~f~~~~-------~--fp~--Dp~~~~y~alGl~~~~~~~~~P~a~~~~~k~~~~g~~~~~~~~~~g~~~~~~~~qlgG~ 214 (248)
+|++.+ + ||+ |++.++.++||+.... +..+|.+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~------------------------------------g~~~P~~ 124 (192)
T 2h01_A 81 AWKKTPLSQGGIGNIKHTLISDISKSIARSYDVLFNE------------------------------------SVALRAF 124 (192)
T ss_dssp HHHTSCGGGTCCCSCSSEEEECTTSHHHHHTTCEETT------------------------------------TEECCEE
T ss_pred HHHHhHHhhCCccCCCcCeEECCcHHHHHHhCCcCcC------------------------------------CceeeEE
Confidence 999866 4 555 9999999999886310 0245789
Q ss_pred EEEeCCCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025756 215 IVAGPGKSNISYIHRDKEAGDDPDIQDILKACC 247 (248)
Q Consensus 215 fVvd~gg~~I~~~h~~~~~~Dh~~i~eIL~al~ 247 (248)
||||++| +|++.+.+..+.+ .+.+++++++.
T Consensus 125 ~liD~~G-~i~~~~~g~~~~~-~~~~~l~~~l~ 155 (192)
T 2h01_A 125 VLIDKQG-VVQHLLVNNLALG-RSVDEILRLID 155 (192)
T ss_dssp EEECTTS-BEEEEEEGGGSSG-GGHHHHHHHHH
T ss_pred EEEcCCC-EEEEEEeCCCCCC-CCHHHHHHHHH
Confidence 9999998 9999998754333 36788887664
No 32
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=99.86 E-value=6.9e-21 Score=162.87 Aligned_cols=143 Identities=9% Similarity=-0.005 Sum_probs=116.0
Q ss_pred CCccccCcCCCcEEecC---CCCeEeCCCccCCCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCCHHH
Q 025756 67 VSEDTKNLLDTVKVYDV---NGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQ 143 (248)
Q Consensus 67 ~~~~~g~~ap~f~L~d~---~G~~v~l~~l~~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~~~~ 143 (248)
...++|+++|+|++.|. +|+.++|+++. ++++||.|++..|||.|+.++..|++.+++|++.|++||+|+.|+.+.
T Consensus 17 ~~~~~G~~aP~f~l~~~~~~~g~~v~l~d~~-Gk~vvl~F~pat~C~~C~~e~~~l~~l~~~~~~~~v~vv~Is~D~~~~ 95 (211)
T 2pn8_A 17 NLYFQSMPAPYWEGTAVIDGEFKELKLTDYR-GKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFT 95 (211)
T ss_dssp --CCSSCBCCCCEEEEEETTEEEEEEGGGGT-TSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHH
T ss_pred ccCCCCCcCCCeEeecccCCCCcEEEHHHhC-CCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHH
Confidence 35688999999999974 56899999974 456666666699999999999999999999999999999999999999
Q ss_pred HHHHHhhc-------C--CCC--CCChHHHHHcCCccccccccCchhhHHHHHHHHhhhhhhccccccccccCCCceeec
Q 025756 144 ARTFSEQT-------K--FKG--DPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQG 212 (248)
Q Consensus 144 ~~~f~~~~-------~--fp~--Dp~~~~y~alGl~~~~~~~~~P~a~~~~~k~~~~g~~~~~~~~~~g~~~~~~~~qlg 212 (248)
+++|++++ + ||+ |++.++.++||+..... +...|
T Consensus 96 ~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~~ygv~~~~~-----------------------------------g~~~p 140 (211)
T 2pn8_A 96 HLAWINTPRRQGGLGPIRIPLLSDLTHQISKDYGVYLEDS-----------------------------------GHTLR 140 (211)
T ss_dssp HHHHHTSCGGGTCCCSCSSCEEECTTSHHHHHTTCEETTT-----------------------------------TEECE
T ss_pred HHHHHHHhhhccCccCCceEEEECCchHHHHHcCCcccCC-----------------------------------Ccccc
Confidence 99999866 4 666 99999999999863210 12367
Q ss_pred eEEEEeCCCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025756 213 GIIVAGPGKSNISYIHRDKEAGDDPDIQDILKACC 247 (248)
Q Consensus 213 G~fVvd~gg~~I~~~h~~~~~~Dh~~i~eIL~al~ 247 (248)
.+||||++| +|++.+.+....+ .+.+++++++.
T Consensus 141 ~~~lID~~G-~I~~~~~g~~~~~-~~~~ell~~l~ 173 (211)
T 2pn8_A 141 GLFIIDDKG-ILRQITLNDLPVG-RSVDETLRLVQ 173 (211)
T ss_dssp EEEEECTTS-BEEEEEEECTTBC-CCHHHHHHHHH
T ss_pred eEEEECCCC-EEEEEEecCCCCC-CCHHHHHHHHH
Confidence 899999998 9999998743322 37788887664
No 33
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=99.86 E-value=5e-21 Score=158.08 Aligned_cols=143 Identities=13% Similarity=0.152 Sum_probs=114.7
Q ss_pred CccccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCCHHHHHHH
Q 025756 68 SEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTF 147 (248)
Q Consensus 68 ~~~~g~~ap~f~L~d~~G~~v~l~~l~~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~~~~~~~f 147 (248)
..++|+.+|+|++.|.+|+.++++++ +++++||.|++.+||++|+.++..|.+.+++ .|+++|+|+.|+.+.+++|
T Consensus 17 ~l~~G~~~P~f~l~~~~G~~v~l~~~-~gk~vvl~F~~t~~C~~C~~~~~~l~~l~~~---~~v~vv~Is~D~~~~~~~~ 92 (175)
T 1xvq_A 17 LPAVGSPAPAFTLTGGDLGVISSDQF-RGKSVLLNIFPSVDTPVCATSVRTFDERAAA---SGATVLCVSKDLPFAQKRF 92 (175)
T ss_dssp CCCTTSBCCCCEEECTTSCEEEGGGG-TTSCEEEEECSCCCSSCCCHHHHHHHHHHHH---TTCEEEEEESSCHHHHTTC
T ss_pred CCCcCCcCCCeEEECCCCCEEeHHHc-CCCEEEEEEEeCCCCchHHHHHHHHHHHHhh---cCCEEEEEECCCHHHHHHH
Confidence 46889999999999999999999997 4456655555555599999999999999887 7899999999999999999
Q ss_pred HhhcCC-CC----CCChHHHHHcCCccccccccCchhhHHHHHHHHhhhhhhccccccccccCCCceeeceEEEEeCCCC
Q 025756 148 SEQTKF-KG----DPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGPGKS 222 (248)
Q Consensus 148 ~~~~~f-p~----Dp~~~~y~alGl~~~~~~~~~P~a~~~~~k~~~~g~~~~~~~~~~g~~~~~~~~qlgG~fVvd~gg~ 222 (248)
++++++ ++ |++.+++++||+..... + ..+...|.+||||++|
T Consensus 93 ~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~----~----------------------------~~g~~~p~~~lid~~G- 139 (175)
T 1xvq_A 93 CGAEGTENVMPASAFRDSFGEDYGVTIADG----P----------------------------MAGLLARAIVVIGADG- 139 (175)
T ss_dssp C------CEEEEECTTSSHHHHTTCBBCSS----T----------------------------TTTSBCSEEEEECTTS-
T ss_pred HHHcCCCCceEeeCCHHHHHHHhCCccccc----c----------------------------cCCcccceEEEECCCC-
Confidence 987765 34 99999999999863310 0 0013467899999998
Q ss_pred eEEEEEeCCCCCCCCCHHHHHHHhh
Q 025756 223 NISYIHRDKEAGDDPDIQDILKACC 247 (248)
Q Consensus 223 ~I~~~h~~~~~~Dh~~i~eIL~al~ 247 (248)
+|++.|.+....+.++++++|+++.
T Consensus 140 ~I~~~~~g~~~~~~~~~~~~l~~l~ 164 (175)
T 1xvq_A 140 NVAYTELVPEIAQEPNYEAALAALG 164 (175)
T ss_dssp BEEEEEECSBTTCCCCHHHHHHHHH
T ss_pred eEEEEEECCCcCCCCCHHHHHHHHH
Confidence 9999999878888999999999875
No 34
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=99.85 E-value=1.1e-20 Score=157.04 Aligned_cols=140 Identities=11% Similarity=0.185 Sum_probs=115.5
Q ss_pred cccCcCCCcEEecCCCC----eEeCCCccCCCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCCHHHHH
Q 025756 70 DTKNLLDTVKVYDVNGN----AIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQAR 145 (248)
Q Consensus 70 ~~g~~ap~f~L~d~~G~----~v~l~~l~~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~~~~~~ 145 (248)
++|+.+|+|++.|.+|+ .++++++. ++++||.|+|+.||++|+.++..|.+.++++++.|+++|+|+.++.+.++
T Consensus 2 ~~G~~~P~f~l~~~~g~~~~~~~~l~~~~-gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d~~~~~~ 80 (187)
T 1we0_A 2 LIGTEVQPFRAQAFQSGKDFFEVTEADLK-GKWSIVVFYPADFSFVCPTELEDVQKEYAELKKLGVEVYSVSTDTHFVHK 80 (187)
T ss_dssp CTTCBCCCCEEEEECSSSCCEEEETTTTS-SSEEEEEECSCTTCSSCTHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHH
T ss_pred CCCCcCCCeEEeccCCCccceEecHHHHC-CCCEEEEEECCCCCcchHHHHHHHHHHHHHHHHcCCEEEEEECCCHHHHH
Confidence 67999999999999999 99999974 46777777779999999999999999999999999999999999999999
Q ss_pred HHHhhc----C--CCC--CCChHHHHHcCCccccccccCchhhHHHHHHHHhhhhhhccccccccccCCCceeeceEEEE
Q 025756 146 TFSEQT----K--FKG--DPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVA 217 (248)
Q Consensus 146 ~f~~~~----~--fp~--Dp~~~~y~alGl~~~~~~~~~P~a~~~~~k~~~~g~~~~~~~~~~g~~~~~~~~qlgG~fVv 217 (248)
+|++.+ + ||+ |++.+++++||+..... +...|.+|||
T Consensus 81 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~~-----------------------------------g~~~P~~~li 125 (187)
T 1we0_A 81 AWHENSPAVGSIEYIMIGDPSQTISRQFDVLNEET-----------------------------------GLADRGTFII 125 (187)
T ss_dssp HHHHSCHHHHTCCSEEEECTTCHHHHHTTCEETTT-----------------------------------TEECEEEEEE
T ss_pred HHHHHhccccCCCceEEECCchHHHHHhCCCcCCC-----------------------------------CceeeEEEEE
Confidence 999876 5 444 99999999998863310 1346789999
Q ss_pred eCCCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025756 218 GPGKSNISYIHRDKEAGDDPDIQDILKACC 247 (248)
Q Consensus 218 d~gg~~I~~~h~~~~~~Dh~~i~eIL~al~ 247 (248)
|++| +|++.|.+....+ .+.+++++++.
T Consensus 126 d~~G-~i~~~~~g~~~~~-~~~~~l~~~l~ 153 (187)
T 1we0_A 126 DPDG-VIQAIEINADGIG-RDASTLINKVK 153 (187)
T ss_dssp CTTS-BEEEEEEECTTSC-CCTTHHHHHHH
T ss_pred CCCC-eEEEEEecCCCCC-CCHHHHHHHHH
Confidence 9998 9999998864433 25567766553
No 35
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=99.85 E-value=7.5e-21 Score=167.86 Aligned_cols=143 Identities=9% Similarity=0.047 Sum_probs=118.6
Q ss_pred CCccccCcCCCcEEe---cCCCCeEeCCCccCCCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCCHHH
Q 025756 67 VSEDTKNLLDTVKVY---DVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQ 143 (248)
Q Consensus 67 ~~~~~g~~ap~f~L~---d~~G~~v~l~~l~~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~~~~ 143 (248)
...++|+++|+|++. |.+|+.++|+++ +++++||+|++..||++|..++.+|++.+++|++.|++||+|+.|+.+.
T Consensus 60 ~~l~vG~~aPdF~l~~l~d~~G~~vsLsd~-kGK~vvL~F~~a~~cp~C~~el~~l~~l~~~~~~~gv~vv~IS~D~~~~ 138 (254)
T 3tjj_A 60 SKAKISKPAPYWEGTAVIDGEFKELKLTDY-RGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFT 138 (254)
T ss_dssp CCCCTTSBCCCCEEEEEETTEEEEEEGGGG-TTSEEEEEECSCTTCSSCCHHHHHHHHTHHHHHTTTEEEEEEESSCHHH
T ss_pred cccCCCCCCCCcEeeeecCCCCcEEeHHHH-CCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEcCCCHHH
Confidence 456799999999976 557889999997 4567888888899999999999999999999999999999999999999
Q ss_pred HHHHHhhc---------CCCC--CCChHHHHHcCCccccccccCchhhHHHHHHHHhhhhhhccccccccccCCCceeec
Q 025756 144 ARTFSEQT---------KFKG--DPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQG 212 (248)
Q Consensus 144 ~~~f~~~~---------~fp~--Dp~~~~y~alGl~~~~~~~~~P~a~~~~~k~~~~g~~~~~~~~~~g~~~~~~~~qlg 212 (248)
+++|++.+ +||+ |++.++.++||+.... .+...|
T Consensus 139 ~~~~~~~~~~~~g~~~~~fp~l~D~~~~va~~ygv~~~~-----------------------------------~g~~~p 183 (254)
T 3tjj_A 139 HLAWINTPRRQGGLGPIRIPLLSDLTHQISKDYGVYLED-----------------------------------SGHTLR 183 (254)
T ss_dssp HHHHHTSCGGGTSCCSCSSCEEECTTSHHHHHHTCEETT-----------------------------------TTEECE
T ss_pred HHHHHHHHHHhcCCcccccceeeCcHHHHHHHcCCcccc-----------------------------------CCCccc
Confidence 99999764 3666 9999999999986321 013467
Q ss_pred eEEEEeCCCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025756 213 GIIVAGPGKSNISYIHRDKEAGDDPDIQDILKACC 247 (248)
Q Consensus 213 G~fVvd~gg~~I~~~h~~~~~~Dh~~i~eIL~al~ 247 (248)
++||||++| +|++.+..... ....++++|+++.
T Consensus 184 ~tflID~~G-~I~~~~~~~~~-~~~~~~eil~~L~ 216 (254)
T 3tjj_A 184 GLFIIDDKG-ILRQITLNDLP-VGRSVDETLRLVQ 216 (254)
T ss_dssp EEEEECTTS-BEEEEEEECTT-CCCCHHHHHHHHH
T ss_pred eEEEECCCC-eEEEEEecCCC-CCCCHHHHHHHHH
Confidence 899999998 99999987544 3347788887764
No 36
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=99.85 E-value=1.3e-20 Score=164.56 Aligned_cols=143 Identities=10% Similarity=0.014 Sum_probs=117.3
Q ss_pred CCccccCcCCCcEEec---CCCCeEeCCCccCCCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCCHHH
Q 025756 67 VSEDTKNLLDTVKVYD---VNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQ 143 (248)
Q Consensus 67 ~~~~~g~~ap~f~L~d---~~G~~v~l~~l~~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~~~~ 143 (248)
...++|+++|+|++.+ .+|+.++|+++. ++++||+|++..|||+|+.++.+|++.+++|++.|++||+|+.|+.+.
T Consensus 46 ~~l~vG~~aPdF~l~~~~d~~G~~vsLsd~~-Gk~vvL~F~~~~~cp~C~~el~~l~~l~~~~~~~gv~vv~Is~D~~~~ 124 (240)
T 3qpm_A 46 SKAKISKPAPQWEGTAVINGEFKELKLSDYR-GKYLVFFFYPLDFTFVCPTEIIAFSDRVHEFRAINTEVVACSVDSQFT 124 (240)
T ss_dssp CSCCTTSBCCCCEEEEEETTEEEEEEGGGGT-TSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHTTTEEEEEEESSCHHH
T ss_pred CcCCCCCCCCCcEeeeeeCCCCcEEEHHHhC-CCEEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECCCHHH
Confidence 3468999999999874 456799999974 467777777779999999999999999999999999999999999999
Q ss_pred HHHHHhhc-------C--CCC--CCChHHHHHcCCccccccccCchhhHHHHHHHHhhhhhhccccccccccCCCceeec
Q 025756 144 ARTFSEQT-------K--FKG--DPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQG 212 (248)
Q Consensus 144 ~~~f~~~~-------~--fp~--Dp~~~~y~alGl~~~~~~~~~P~a~~~~~k~~~~g~~~~~~~~~~g~~~~~~~~qlg 212 (248)
+++|++.+ + ||+ |++.++.++||+.... .+...|
T Consensus 125 ~~~~~~~~~~~~~~~~~~fp~l~D~~~~v~~~ygv~~~~-----------------------------------~g~~~p 169 (240)
T 3qpm_A 125 HLAWIITPRKQGGLGPMKIPLLSDLTHQISKDYGVYLED-----------------------------------QGHTLR 169 (240)
T ss_dssp HHHHHHSCGGGTCCCSCSSCEEECTTSHHHHHTTCEETT-----------------------------------TTEECE
T ss_pred HHHHHHHHHhhcCCCCCceeEEeCchHHHHHHhCCcccc-----------------------------------CCCccc
Confidence 99999864 3 666 9999999999986321 013467
Q ss_pred eEEEEeCCCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025756 213 GIIVAGPGKSNISYIHRDKEAGDDPDIQDILKACC 247 (248)
Q Consensus 213 G~fVvd~gg~~I~~~h~~~~~~Dh~~i~eIL~al~ 247 (248)
++||||++| +|++.+.+.... ...++++|+.+.
T Consensus 170 ~~flID~~G-~I~~~~~~~~~~-~~~~~eil~~l~ 202 (240)
T 3qpm_A 170 GLFIIDEKG-VLRQITMNDLPV-GRSVDETLRLVQ 202 (240)
T ss_dssp EEEEECTTS-BEEEEEEECTTB-CCCHHHHHHHHH
T ss_pred eEEEEcCCC-eEEEEEecCCCC-CCCHHHHHHHHH
Confidence 899999998 999999875443 446788887764
No 37
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=99.85 E-value=2.7e-20 Score=156.24 Aligned_cols=142 Identities=11% Similarity=0.090 Sum_probs=118.2
Q ss_pred CccccCcCCCcEEecC-CC--CeEeCCCccCCCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCCHHHH
Q 025756 68 SEDTKNLLDTVKVYDV-NG--NAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQA 144 (248)
Q Consensus 68 ~~~~g~~ap~f~L~d~-~G--~~v~l~~l~~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~~~~~ 144 (248)
..++|+++|+|++.|. +| +.++|+++ +++++||.|++..||+.|+.++..|.+.++++++.|++||+|+.++.+.+
T Consensus 4 ~l~~G~~aP~f~l~~~~~g~~~~v~l~~~-~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~ 82 (197)
T 1qmv_A 4 NARIGKPAPDFKATAVVDGAFKEVKLSDY-KGKYVVLFFYPLDFTFVAPTEIIAFSNRAEDFRKLGCEVLGVSVDSQFTH 82 (197)
T ss_dssp TBCTTSBCCCCEEEEEETTEEEEEEGGGG-TTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHH
T ss_pred cccCCCCCCCeEeEeecCCCccEEEHHHH-CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHH
Confidence 4688999999999998 88 99999997 45667776666999999999999999999999999999999999999989
Q ss_pred HHHHhhc-------C--CCC--CCChHHHHHcCCccccccccCchhhHHHHHHHHhhhhhhccccccccccCCCceeece
Q 025756 145 RTFSEQT-------K--FKG--DPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGG 213 (248)
Q Consensus 145 ~~f~~~~-------~--fp~--Dp~~~~y~alGl~~~~~~~~~P~a~~~~~k~~~~g~~~~~~~~~~g~~~~~~~~qlgG 213 (248)
++|++.+ + ||+ |++.++.++||+.... .+...|+
T Consensus 83 ~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~~~gv~~~~-----------------------------------~~~~~P~ 127 (197)
T 1qmv_A 83 LAWINTPRKEGGLGPLNIPLLADVTRRLSEDYGVLKTD-----------------------------------EGIAYRG 127 (197)
T ss_dssp HHHHTSCGGGTCCCSCSSCEEECTTCHHHHHTTCEETT-----------------------------------TTEECEE
T ss_pred HHHHHHHHhhCCCCCCceEEEECCcHHHHHHcCCccCC-----------------------------------CCceeeE
Confidence 9998865 4 665 9999999999885321 0134678
Q ss_pred EEEEeCCCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025756 214 IIVAGPGKSNISYIHRDKEAGDDPDIQDILKACC 247 (248)
Q Consensus 214 ~fVvd~gg~~I~~~h~~~~~~Dh~~i~eIL~al~ 247 (248)
+||||++| +|++.+.+.... ..+++++++++.
T Consensus 128 ~~lid~~G-~i~~~~~g~~~~-~~~~~e~l~~l~ 159 (197)
T 1qmv_A 128 LFIIDGKG-VLRQITVNDLPV-GRSVDEALRLVQ 159 (197)
T ss_dssp EEEECTTS-BEEEEEEECTTB-CCCHHHHHHHHH
T ss_pred EEEECCCC-cEEEEEeCCCCC-CCCHHHHHHHHH
Confidence 99999998 999999875443 457889888764
No 38
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=99.85 E-value=2.5e-20 Score=157.18 Aligned_cols=142 Identities=11% Similarity=0.144 Sum_probs=118.1
Q ss_pred CccccCcCCCcEEecC--CC--CeEeCCCccCCCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCCHHH
Q 025756 68 SEDTKNLLDTVKVYDV--NG--NAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQ 143 (248)
Q Consensus 68 ~~~~g~~ap~f~L~d~--~G--~~v~l~~l~~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~~~~ 143 (248)
..++|+++|+|++.+. +| +.++|+++. ++++||.|++..||++|+.++..|++.++++++.|++||+|+.++.+.
T Consensus 5 ~~~~G~~aP~f~l~~~~~~g~~~~v~l~~~~-gk~vvl~F~~~~~C~~C~~~~~~l~~l~~~~~~~~v~vi~Is~D~~~~ 83 (202)
T 1uul_A 5 EAEDLHPAPDFNETALMPNGTFKKVALTSYK-GKWLVLFFYPMDFTFVCPTEICQFSDRVKEFSDIGCEVLACSMDSEYS 83 (202)
T ss_dssp CCCTTSBCCCCEEEEECTTSCEEEEEGGGGT-TSEEEEEECSCTTCSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHH
T ss_pred cccCCCcCCCcEeeeeecCCCccEEEHHHhC-CCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHH
Confidence 3578999999999997 78 899999974 456777777799999999999999999999999999999999999999
Q ss_pred HHHHHhhc-------C--CCC--CCChHHHHHcCCccccccccCchhhHHHHHHHHhhhhhhccccccccccCCCceeec
Q 025756 144 ARTFSEQT-------K--FKG--DPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQG 212 (248)
Q Consensus 144 ~~~f~~~~-------~--fp~--Dp~~~~y~alGl~~~~~~~~~P~a~~~~~k~~~~g~~~~~~~~~~g~~~~~~~~qlg 212 (248)
+++|++++ + ||+ |++.+++++||+.... .+...|
T Consensus 84 ~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~~ygv~~~~-----------------------------------~g~~~P 128 (202)
T 1uul_A 84 HLAWTSIERKRGGLGQMNIPILADKTKCIMKSYGVLKEE-----------------------------------DGVAYR 128 (202)
T ss_dssp HHHHHHSCGGGTCCCSCSSCEEECTTCHHHHHHTCEETT-----------------------------------TTEECE
T ss_pred HHHHHHHHHhhCCCCCCceeEEECCchHHHHHcCCccCC-----------------------------------CCceee
Confidence 99999865 4 665 9999999999986331 013467
Q ss_pred eEEEEeCCCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025756 213 GIIVAGPGKSNISYIHRDKEAGDDPDIQDILKACC 247 (248)
Q Consensus 213 G~fVvd~gg~~I~~~h~~~~~~Dh~~i~eIL~al~ 247 (248)
++||||++| +|++.+.+... ...+.+++++++.
T Consensus 129 ~~~lid~~G-~i~~~~~g~~~-~~~~~~ell~~l~ 161 (202)
T 1uul_A 129 GLFIIDPKQ-NLRQITVNDLP-VGRDVDEALRLVK 161 (202)
T ss_dssp EEEEECTTS-BEEEEEEECTT-BCCCHHHHHHHHH
T ss_pred EEEEECCCC-EEEEEEeCCCC-CCCCHHHHHHHHH
Confidence 899999998 99999987543 3357888887764
No 39
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=99.85 E-value=9.4e-21 Score=167.15 Aligned_cols=142 Identities=14% Similarity=0.097 Sum_probs=118.3
Q ss_pred ccccCcCCCcEEecCCCCeEeC-CCcc-CCCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCCHHHHHH
Q 025756 69 EDTKNLLDTVKVYDVNGNAIPI-SDLW-KDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQART 146 (248)
Q Consensus 69 ~~~g~~ap~f~L~d~~G~~v~l-~~l~-~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~~~~~~~ 146 (248)
..+|+.+|+|++.+.+| .++| ++++ +++++||+||+..|||+|..++..|++.+++|++.|++||+|+.|+.+.+.+
T Consensus 5 ~~iG~~aPdF~l~~~~G-~v~l~~d~l~~GK~vVL~~fpa~~CpvC~tEl~~l~~l~~ef~~~gv~VI~VS~Ds~~~~~~ 83 (249)
T 3a2v_A 5 PLIGERFPEMEVTTDHG-VIKLPDHYVSQGKWFVLFSHPADFTPVCTTEFVSFARRYEDFQRLGVDLIGLSVDSVFSHIK 83 (249)
T ss_dssp CCTTSBCCCEEEEETTE-EEEETHHHHTTTCEEEEECCSCTTCHHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHH
T ss_pred CCCCCCCCCeEEEcCCC-CEecHHHHhhCCCEEEEEEEcCCCCcChHHHHHHHHHHHHHHHhCCcEEEEEECCCHHHHHH
Confidence 47899999999999999 8999 9975 5667899999999999999999999999999999999999999999988888
Q ss_pred HHhh--------cCCCC--CCChHHHHHcCCccccccccCchhhHHHHHHHHhhhhhhccccccccccCCCceeeceEEE
Q 025756 147 FSEQ--------TKFKG--DPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIV 216 (248)
Q Consensus 147 f~~~--------~~fp~--Dp~~~~y~alGl~~~~~~~~~P~a~~~~~k~~~~g~~~~~~~~~~g~~~~~~~~qlgG~fV 216 (248)
|.+. .+||+ |+++++.++||+..... +....|++||
T Consensus 84 w~~~~~~~~~~~i~fPil~D~~~~ia~~ygv~~~~~----------------------------------g~~~~p~~fI 129 (249)
T 3a2v_A 84 WKEWIERHIGVRIPFPIIADPQGTVARRLGLLHAES----------------------------------ATHTVRGVFI 129 (249)
T ss_dssp HHHHHHHHTCCCCCSCEEECTTSHHHHHHTCCCTTC----------------------------------SSSCCEEEEE
T ss_pred HHHHHHHhcCCCCceeEEECCchHHHHHhCCccccC----------------------------------CCcccceEEE
Confidence 8763 34676 99999999999863310 0124679999
Q ss_pred EeCCCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025756 217 AGPGKSNISYIHRDKEAGDDPDIQDILKACC 247 (248)
Q Consensus 217 vd~gg~~I~~~h~~~~~~Dh~~i~eIL~al~ 247 (248)
||++| +|++.+.+..... .+++||++++.
T Consensus 130 ID~dG-~I~~~~~~~~~~g-r~~~Ellr~I~ 158 (249)
T 3a2v_A 130 VDARG-VIRTMLYYPMELG-RLVDEILRIVK 158 (249)
T ss_dssp ECTTS-BEEEEEEECTTBC-CCHHHHHHHHH
T ss_pred ECCCC-eEEEEEecCCccc-chhHHHHHHHH
Confidence 99998 9999998754422 36788887764
No 40
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=99.85 E-value=5.1e-21 Score=155.57 Aligned_cols=141 Identities=11% Similarity=0.118 Sum_probs=117.1
Q ss_pred CccccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCCHHHHHHH
Q 025756 68 SEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTF 147 (248)
Q Consensus 68 ~~~~g~~ap~f~L~d~~G~~v~l~~l~~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~~~~~~~f 147 (248)
..++|+++|+|++.|.+|+.++++++. ++++||.|+..+||+.|+.++..|++.++++ .|+++|+|+.|+.+.+++|
T Consensus 17 ~~~~G~~~p~f~l~~~~G~~~~l~~~~-gk~~vl~F~~~~~C~~C~~~~~~l~~l~~~~--~~~~vv~is~d~~~~~~~~ 93 (167)
T 2jsy_A 17 EVKVGDQAPDFTVLTNSLEEKSLADMK-GKVTIISVIPSIDTGVCDAQTRRFNEEAAKL--GDVNVYTISADLPFAQARW 93 (167)
T ss_dssp CCCTTSCCCCCEEEBTTCCEEEHHHHT-TSCEEEEECSCSTTSHHHHTHHHHHHHHHHH--SSCEEEEEECSSGGGTSCC
T ss_pred ccCCCCcCCceEEECCCCCEeeHHHhC-CCeEEEEEecCCCCCchHHHHHHHHHHHHHc--CCCEEEEEECCCHHHHHHH
Confidence 468899999999999999999999974 4455555544444999999999999999999 8999999999999889999
Q ss_pred HhhcCC-CC----C-CChHHHHHcCCccccccccCchhhHHHHHHHHhhhhhhccccccccccCCCceeeceEEEEeCCC
Q 025756 148 SEQTKF-KG----D-PNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGPGK 221 (248)
Q Consensus 148 ~~~~~f-p~----D-p~~~~y~alGl~~~~~~~~~P~a~~~~~k~~~~g~~~~~~~~~~g~~~~~~~~qlgG~fVvd~gg 221 (248)
++++++ ++ | ++.++.++||+.... .++..|.+||||++|
T Consensus 94 ~~~~~~~~~~~~~d~~~~~~~~~~~v~~~~-----------------------------------~g~~~p~~~lid~~G 138 (167)
T 2jsy_A 94 CGANGIDKVETLSDHRDMSFGEAFGVYIKE-----------------------------------LRLLARSVFVLDENG 138 (167)
T ss_dssp GGGSSCTTEEEEEGGGTCHHHHHTTCBBTT-----------------------------------TCSBCCEEEEECTTS
T ss_pred HHhcCCCCceEeeCCchhHHHHHhCCcccc-----------------------------------CCceeeEEEEEcCCC
Confidence 998765 44 8 888888888875321 012357899999998
Q ss_pred CeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025756 222 SNISYIHRDKEAGDDPDIQDILKACC 247 (248)
Q Consensus 222 ~~I~~~h~~~~~~Dh~~i~eIL~al~ 247 (248)
+|++.|.+.+..++++.++++++++
T Consensus 139 -~i~~~~~g~~~~~~~~~~~l~~~l~ 163 (167)
T 2jsy_A 139 -KVVYAEYVSEATNHPNYEKPIEAAK 163 (167)
T ss_dssp -CEEEEEECSBTTSCCCSHHHHHHHH
T ss_pred -cEEEEEecCCcCCCCCHHHHHHHHH
Confidence 9999999988899999999998875
No 41
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=99.85 E-value=2.4e-20 Score=160.34 Aligned_cols=142 Identities=11% Similarity=0.093 Sum_probs=115.4
Q ss_pred CccccCcCCCcEEecC---CCCeEeCCCccCCCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCCHHHH
Q 025756 68 SEDTKNLLDTVKVYDV---NGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQA 144 (248)
Q Consensus 68 ~~~~g~~ap~f~L~d~---~G~~v~l~~l~~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~~~~~ 144 (248)
..++|+++|+|++.+. +|+.++|+++ +++++||.|++..||++|+.++..|++.++++++.|++||+|+.|+.+..
T Consensus 39 ~l~~G~~aP~f~l~~~~d~~G~~v~l~~~-~Gk~vll~F~a~~wC~~C~~~~p~l~~l~~~~~~~~v~vv~Is~D~~~~~ 117 (222)
T 3ztl_A 39 VLLPNRPAPEFKGQAVINGEFKEICLKDY-RGKYVVLFFYPADFTFVCPTEIIAFSDQVEEFNSRNCQVIACSTDSQYSH 117 (222)
T ss_dssp -CCSSEECCCCEEEEEETTEEEEEEGGGG-TTSEEEEEECSCSSCSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHH
T ss_pred cccCCCCCCCeEEecccCCCCcEEeHHHh-CCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHH
Confidence 4689999999999954 5699999997 44555555555699999999999999999999999999999999999889
Q ss_pred HHHHhhc-------C--CCC--CCChHHHHHcCCccccccccCchhhHHHHHHHHhhhhhhccccccccccCCCceeece
Q 025756 145 RTFSEQT-------K--FKG--DPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGG 213 (248)
Q Consensus 145 ~~f~~~~-------~--fp~--Dp~~~~y~alGl~~~~~~~~~P~a~~~~~k~~~~g~~~~~~~~~~g~~~~~~~~qlgG 213 (248)
++|.+.+ + ||+ |++.++.++||+.... .+...|.
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~ygv~~~~-----------------------------------~g~~~P~ 162 (222)
T 3ztl_A 118 LAWDNLDRKSGGLGHMKIPLLADRKQEISKAYGVFDEE-----------------------------------DGNAFRG 162 (222)
T ss_dssp HHHHHSCGGGTSCCSCSSCEEECSSSHHHHHTTCBCTT-----------------------------------TSSBCEE
T ss_pred HHHHHHhhhhccccccceeEEeCCchHHHHHcCCeecC-----------------------------------CCCccce
Confidence 9998854 4 665 9999999999986331 0123578
Q ss_pred EEEEeCCCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025756 214 IIVAGPGKSNISYIHRDKEAGDDPDIQDILKACC 247 (248)
Q Consensus 214 ~fVvd~gg~~I~~~h~~~~~~Dh~~i~eIL~al~ 247 (248)
+||||++| +|++.+.+....+ ..++++++++.
T Consensus 163 ~~lID~~G-~I~~~~~g~~~~~-~~~~~il~~l~ 194 (222)
T 3ztl_A 163 LFIIDPNG-ILRQITINDKPVG-RSVDETLRLLD 194 (222)
T ss_dssp EEEECTTS-EEEEEEEECTTBC-CCHHHHHHHHH
T ss_pred EEEECCCC-eEEEEEecCCCCC-CCHHHHHHHHH
Confidence 99999998 9999999865543 35889988774
No 42
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=99.84 E-value=3.6e-20 Score=159.21 Aligned_cols=142 Identities=11% Similarity=0.065 Sum_probs=117.6
Q ss_pred CccccCcCCCcEEec---CCCCeEeCCCccCCCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCCHHHH
Q 025756 68 SEDTKNLLDTVKVYD---VNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQA 144 (248)
Q Consensus 68 ~~~~g~~ap~f~L~d---~~G~~v~l~~l~~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~~~~~ 144 (248)
..++|+++|+|++.+ .+|+.++|+++. ++++||.|+|..|||+|+.++..|.+.+++|++.|++||+|+.++.+.+
T Consensus 26 ~l~~G~~aP~f~l~~~~~~~g~~v~l~d~~-Gk~vll~F~pa~~Cp~C~~~~~~l~~l~~~~~~~~v~vv~Is~D~~~~~ 104 (220)
T 1zye_A 26 APAVTQHAPYFKGTAVVSGEFKEISLDDFK-GKYLVLFFYPLDFTFVCPTEIIAFSDKASEFHDVNCEVVAVSVDSHFSH 104 (220)
T ss_dssp -CCTTSBCCCCEEEEECSSSEEEEEGGGGT-TSEEEEEECSCTTCSSSHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHH
T ss_pred cccCCCCCCCcEEEeeeCCCCcEEEHHHhC-CCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHH
Confidence 468999999999984 578999999974 4677777777999999999999999999999999999999999999999
Q ss_pred HHHHhhc-------C--CCC--CCChHHHHHcCCccccccccCchhhHHHHHHHHhhhhhhccccccccccCCCceeece
Q 025756 145 RTFSEQT-------K--FKG--DPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGG 213 (248)
Q Consensus 145 ~~f~~~~-------~--fp~--Dp~~~~y~alGl~~~~~~~~~P~a~~~~~k~~~~g~~~~~~~~~~g~~~~~~~~qlgG 213 (248)
++|++.+ + ||+ |++.++.++||+.... .+..+|.
T Consensus 105 ~~~~~~~~~~~g~~~~~fp~l~D~~~~i~~~ygv~~~~-----------------------------------~g~~~P~ 149 (220)
T 1zye_A 105 LAWINTPRKNGGLGHMNIALLSDLTKQISRDYGVLLEG-----------------------------------PGLALRG 149 (220)
T ss_dssp HHHHTSCGGGTCCCSCSSEEEECTTSHHHHHTTCEETT-----------------------------------TTEECEE
T ss_pred HHHHHHHHHhCCCcCCceEEEECCcHHHHHHhCCeecC-----------------------------------CCcccce
Confidence 9999865 3 555 9999999999986331 0134678
Q ss_pred EEEEeCCCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025756 214 IIVAGPGKSNISYIHRDKEAGDDPDIQDILKACC 247 (248)
Q Consensus 214 ~fVvd~gg~~I~~~h~~~~~~Dh~~i~eIL~al~ 247 (248)
+||||++| +|+|.+.+. .....+.+++++++.
T Consensus 150 ~~liD~~G-~I~~~~~g~-~~~~~~~~ell~~l~ 181 (220)
T 1zye_A 150 LFIIDPNG-VIKHLSVND-LPVGRSVEETLRLVK 181 (220)
T ss_dssp EEEECTTS-BEEEEEEEC-TTCCCCHHHHHHHHH
T ss_pred EEEECCCC-EEEEEEecC-CCCCCCHHHHHHHHH
Confidence 99999998 999999875 334457888887764
No 43
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=99.84 E-value=3.5e-20 Score=155.43 Aligned_cols=140 Identities=10% Similarity=0.070 Sum_probs=116.6
Q ss_pred cccCcCCCcEEecC--CCC---eEeCCCccCCCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCCHHHH
Q 025756 70 DTKNLLDTVKVYDV--NGN---AIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQA 144 (248)
Q Consensus 70 ~~g~~ap~f~L~d~--~G~---~v~l~~l~~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~~~~~ 144 (248)
++|+.+|+|++.|. +|+ .++++++++++++||.|++..||++|+.++..|.+.++++++.|++||+|+.++.+.+
T Consensus 2 ~~G~~~P~f~l~~~~~~G~~~~~v~l~~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~ 81 (198)
T 1zof_A 2 VVTKLAPDFKAPAVLGNNEVDEHFELSKNLGKNGVILFFWPKDFTFVCPTEIIAFDKRVKDFHEKGFNVIGVSIDSEQVH 81 (198)
T ss_dssp CTTSBCCCCEEEEECTTSCEEEEEETTTSCCSSEEEEEECSCTTCSSCCTHHHHHHHTHHHHHHTTEEEEEEESSCHHHH
T ss_pred CCCCcCCceEeecccCCCcccceEEHHHHhCCCcEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEECCCHHHH
Confidence 67999999999999 899 9999998566677777777999999999999999999999999999999999999999
Q ss_pred HHHHhh-------cC--CCC--CCChHHHHHcCCccccccccCchhhHHHHHHHHhhhhhhccccccccccCCCceeece
Q 025756 145 RTFSEQ-------TK--FKG--DPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGG 213 (248)
Q Consensus 145 ~~f~~~-------~~--fp~--Dp~~~~y~alGl~~~~~~~~~P~a~~~~~k~~~~g~~~~~~~~~~g~~~~~~~~qlgG 213 (248)
++|+++ ++ ||+ |++.++.++||+.... +..+|.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~------------------------------------g~~~P~ 125 (198)
T 1zof_A 82 FAWKNTPVEKGGIGQVSFPMVADITKSISRDYDVLFEE------------------------------------AIALRG 125 (198)
T ss_dssp HHHHTSCGGGTCCCCCSSCEEECTTSHHHHHTTCEETT------------------------------------TEECEE
T ss_pred HHHHHhhhhcccccCceeEEEECCchHHHHHhCCcccC------------------------------------Ccccce
Confidence 999987 55 554 9999999999886420 023578
Q ss_pred EEEEeCCCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025756 214 IIVAGPGKSNISYIHRDKEAGDDPDIQDILKACC 247 (248)
Q Consensus 214 ~fVvd~gg~~I~~~h~~~~~~Dh~~i~eIL~al~ 247 (248)
+||||++| +|++.+.+... ...+.++|++++.
T Consensus 126 ~~lid~~G-~i~~~~~g~~~-~~~~~~~l~~~l~ 157 (198)
T 1zof_A 126 AFLIDKNM-KVRHAVINDLP-LGRNADEMLRMVD 157 (198)
T ss_dssp EEEEETTT-EEEEEEEESSS-CCCHHHHHHHHHH
T ss_pred EEEECCCC-EEEEEEecCCC-CCCCHHHHHHHHH
Confidence 99999998 99999987432 3456778877654
No 44
>4eo3_A Bacterioferritin comigratory protein/NADH dehydro; thioredoxin-fold, alpha-beta-aplha sandwich fold, antioxidan oxidoreductase, FMN binding; HET: FMN; 1.65A {Thermotoga maritima}
Probab=99.84 E-value=1.4e-20 Score=171.36 Aligned_cols=130 Identities=15% Similarity=0.148 Sum_probs=112.1
Q ss_pred CcCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCCHHHHHHHHhhcC
Q 025756 73 NLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTK 152 (248)
Q Consensus 73 ~~ap~f~L~d~~G~~v~l~~l~~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~~~~~~~f~~~~~ 152 (248)
.++|+|+|.|.+|+.++|+|+. ++++||.||+..|||.|+.|+++|++. +..|++||+||.|+++.+++|+++++
T Consensus 2 ak~p~F~l~~~~G~~~~Lsd~~-Gk~vvl~F~p~~~tp~C~~e~~~~~~~----~~~~~~v~gis~D~~~~~~~f~~~~~ 76 (322)
T 4eo3_A 2 ARVKHFELLTDEGKTFTHVDLY-GKYTILFFFPKAGTSGSTREAVEFSRE----NFEKAQVVGISRDSVEALKRFKEKND 76 (322)
T ss_dssp CBCCCCEEEETTSCEEEGGGTT-TSEEEEEECSSTTSHHHHHHHHHHHHS----CCTTEEEEEEESCCHHHHHHHHHHHT
T ss_pred CCCCCcEEECCCcCEEeHHHhC-CCeEEEEEECCCCCCCCHHHHHHHHHH----hhCCCEEEEEeCCCHHHHHHHHHhhC
Confidence 5799999999999999999975 568999999999999999999999753 23589999999999999999999887
Q ss_pred CCC----CCChHHHHHcCCccccccccCchhhHHHHHHHHhhhhhhccccccccccCCCceeeceEEEEeCCCCeEEEEE
Q 025756 153 FKG----DPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGPGKSNISYIH 228 (248)
Q Consensus 153 fp~----Dp~~~~y~alGl~~~~~~~~~P~a~~~~~k~~~~g~~~~~~~~~~g~~~~~~~~qlgG~fVvd~gg~~I~~~h 228 (248)
++| |++.++.++||+.... ..++++||||++| +|++.|
T Consensus 77 l~fp~l~D~~~~v~~~ygv~~~~-------------------------------------~~~r~tfiId~~G-~i~~~~ 118 (322)
T 4eo3_A 77 LKVTLLSDPEGILHEFFNVLENG-------------------------------------KTVRSTFLIDRWG-FVRKEW 118 (322)
T ss_dssp CCSEEEECTTCHHHHHTTCEETT-------------------------------------EECCEEEEECTTS-BEEEEE
T ss_pred CceEEEEcCchHHHHhcCCCCCC-------------------------------------cCccEEEEECCCC-EEEEEE
Confidence 555 9999999999985210 1346899999998 999999
Q ss_pred eCCCCCCCCCHHHHHHHhh
Q 025756 229 RDKEAGDDPDIQDILKACC 247 (248)
Q Consensus 229 ~~~~~~Dh~~i~eIL~al~ 247 (248)
+.-++.+|++ |||++++
T Consensus 119 ~~v~~~~h~~--~~l~~~~ 135 (322)
T 4eo3_A 119 RRVKVEGHVQ--EVKEALD 135 (322)
T ss_dssp ESCCSTTHHH--HHHHHHH
T ss_pred eCCCccccHH--HHHHHHh
Confidence 9999999876 9988875
No 45
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.84 E-value=5.6e-20 Score=154.06 Aligned_cols=141 Identities=11% Similarity=0.116 Sum_probs=116.9
Q ss_pred CccccCcCCCcEEecCC-------------C--CeEeCCCccCCCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCE
Q 025756 68 SEDTKNLLDTVKVYDVN-------------G--NAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVA 132 (248)
Q Consensus 68 ~~~~g~~ap~f~L~d~~-------------G--~~v~l~~l~~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~ 132 (248)
.+++|+.+|+|++.|.+ | +.++++++. ++++||.|+|+.||++|+.++..|.+.++++++.|++
T Consensus 3 ~l~~G~~~P~f~l~~~~~~~~~~~~~~~~~G~~~~v~l~~~~-gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~ 81 (195)
T 2bmx_A 3 LLTIGDQFPAYQLTALIGGDLSKVDAKQPGDYFTTITSDEHP-GKWRVVFFWPKDFTFVCPTEIAAFSKLNDEFEDRDAQ 81 (195)
T ss_dssp BCCTTCBCCCCEEEEECSSCGGGSCCSSGGGGEEEEETTSST-TCEEEEEECSCTTSCCCHHHHHHHHHTHHHHHTTTEE
T ss_pred cCCCCCcCCCcCcccccccccccccccccCCCccEeeHHHhC-CCcEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHCCCE
Confidence 36789999999999998 7 899999974 4677777777999999999999999999999989999
Q ss_pred EEEEeCCCHHHHHHHHhhc----C--CCC--CCChHHHHHcCCccccccccCchhhHHHHHHHHhhhhhhcccccccccc
Q 025756 133 LVLIGPGSVEQARTFSEQT----K--FKG--DPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTV 204 (248)
Q Consensus 133 vV~Is~~~~~~~~~f~~~~----~--fp~--Dp~~~~y~alGl~~~~~~~~~P~a~~~~~k~~~~g~~~~~~~~~~g~~~ 204 (248)
||+|+.++.+.+++|++++ + ||+ |++.+++++||+... .
T Consensus 82 vv~Vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~-~-------------------------------- 128 (195)
T 2bmx_A 82 ILGVSIDSEFAHFQWRAQHNDLKTLPFPMLSDIKRELSQAAGVLNA-D-------------------------------- 128 (195)
T ss_dssp EEEEESSCHHHHHHHHHHCTTGGGCCSCEEECTTSHHHHHHTCBCT-T--------------------------------
T ss_pred EEEEECCCHHHHHHHHHHhccccCCceeEEeCCchHHHHHhCCccc-C--------------------------------
Confidence 9999999999999999876 4 555 999999999887632 0
Q ss_pred CCCceeeceEEEEeCCCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025756 205 SRGGWQQGGIIVAGPGKSNISYIHRDKEAGDDPDIQDILKACC 247 (248)
Q Consensus 205 ~~~~~qlgG~fVvd~gg~~I~~~h~~~~~~Dh~~i~eIL~al~ 247 (248)
+...|.+||||++| +|++.|.+....+ .+.+++++++.
T Consensus 129 ---g~~~P~~~lid~~G-~i~~~~~g~~~~~-~~~~~l~~~l~ 166 (195)
T 2bmx_A 129 ---GVADRVTFIVDPNN-EIQFVSATAGSVG-RNVDEVLRVLD 166 (195)
T ss_dssp ---SSBCEEEEEECTTS-BEEEEEEECTTCC-CCHHHHHHHHH
T ss_pred ---CCccceEEEEcCCC-eEEEEEecCCCCC-CCHHHHHHHHH
Confidence 02356899999998 9999998754333 36788887764
No 46
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=99.82 E-value=4.3e-19 Score=140.88 Aligned_cols=133 Identities=14% Similarity=0.128 Sum_probs=110.4
Q ss_pred ccccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCC-CHHHHHHH
Q 025756 69 EDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG-SVEQARTF 147 (248)
Q Consensus 69 ~~~g~~ap~f~L~d~~G~~v~l~~l~~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~-~~~~~~~f 147 (248)
.++|+.+|+|++.| +|+.++++++ ++ +.+|++|+..||+.|+.++..|.+.++++.+.|+.+|+|+.+ +.+.+++|
T Consensus 3 l~~G~~~P~f~l~~-~g~~~~l~~~-~g-k~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~ 79 (152)
T 3gl3_A 3 LDKGDKAPDFALPG-KTGVVKLSDK-TG-SVVYLDFWASWCGPCRQSFPWMNQMQAKYKAKGFQVVAVNLDAKTGDAMKF 79 (152)
T ss_dssp CCTTSBCCCCEEEB-SSSEEEGGGG-TT-SEEEEEEECTTCTHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSHHHHHHH
T ss_pred CCCCCcCCceEeeC-CCCeEeHHHh-CC-CEEEEEEECCcCHHHHHHHHHHHHHHHHhhcCCeEEEEEECCCCHHHHHHH
Confidence 57899999999999 9999999997 33 466666669999999999999999999999999999999988 55788999
Q ss_pred HhhcCCCC----CCChHHHHHcCCccccccccCchhhHHHHHHHHhhhhhhccccccccccCCCceeeceEEEEeCCCCe
Q 025756 148 SEQTKFKG----DPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGPGKSN 223 (248)
Q Consensus 148 ~~~~~fp~----Dp~~~~y~alGl~~~~~~~~~P~a~~~~~k~~~~g~~~~~~~~~~g~~~~~~~~qlgG~fVvd~gg~~ 223 (248)
.+++++++ |++.++.+.||+. ..|..||||++| +
T Consensus 80 ~~~~~~~~~~~~d~~~~~~~~~~v~-----------------------------------------~~P~~~lid~~G-~ 117 (152)
T 3gl3_A 80 LAQVPAEFTVAFDPKGQTPRLYGVK-----------------------------------------GMPTSFLIDRNG-K 117 (152)
T ss_dssp HHHSCCCSEEEECTTCHHHHHTTCC-----------------------------------------SSSEEEEECTTS-B
T ss_pred HHHcCCCCceeECCcchhHHHcCCC-----------------------------------------CCCeEEEECCCC-C
Confidence 99887555 8877777776653 134689999998 9
Q ss_pred EEEEEeCCCCCCCCCHHHHHHHh
Q 025756 224 ISYIHRDKEAGDDPDIQDILKAC 246 (248)
Q Consensus 224 I~~~h~~~~~~Dh~~i~eIL~al 246 (248)
|++.+.+....+..++++.|+.+
T Consensus 118 i~~~~~g~~~~~~~~l~~~i~~~ 140 (152)
T 3gl3_A 118 VLLQHVGFRPADKEALEQQILAA 140 (152)
T ss_dssp EEEEEESCCTTTHHHHHHHHHHH
T ss_pred EEEEEccCCCcCHHHHHHHHHHH
Confidence 99999987776666666666654
No 47
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=99.81 E-value=6.1e-19 Score=140.28 Aligned_cols=134 Identities=16% Similarity=0.146 Sum_probs=111.7
Q ss_pred cccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCC--HHHHHHH
Q 025756 70 DTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS--VEQARTF 147 (248)
Q Consensus 70 ~~g~~ap~f~L~d~~G~~v~l~~l~~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~--~~~~~~f 147 (248)
++|+++|+|++.|.+|+.++++++ ++ +.+|++|+..||+.|+.++..|.+.++++.+.++.+|+|+.+. .+.+++|
T Consensus 3 ~~G~~~p~~~l~~~~g~~~~l~~~-~g-k~vll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~ 80 (154)
T 3kcm_A 3 LEENPAPDFTLNTLNGEVVKLSDL-KG-QVVIVNFWATWCPPCREEIPSMMRLNAAMAGKPFRMLCVSIDEGGKVAVEEF 80 (154)
T ss_dssp CTTSBCCCCEEECTTSCEEEGGGG-TT-SEEEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEEECCTTHHHHHHHH
T ss_pred CCCCCCCCeEEEcCCCCEEehhhc-CC-CEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEEcCCcchHHHHHH
Confidence 689999999999999999999997 33 4556666699999999999999999999998999999999997 6788999
Q ss_pred HhhcCCCC----CCChHHHHHcCCccccccccCchhhHHHHHHHHhhhhhhccccccccccCCCceeeceEEEEeCCCCe
Q 025756 148 SEQTKFKG----DPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGPGKSN 223 (248)
Q Consensus 148 ~~~~~fp~----Dp~~~~y~alGl~~~~~~~~~P~a~~~~~k~~~~g~~~~~~~~~~g~~~~~~~~qlgG~fVvd~gg~~ 223 (248)
.+++++++ |++..+.+.||+. ..|.+||||++| +
T Consensus 81 ~~~~~~~~~~~~d~~~~~~~~~~v~-----------------------------------------~~P~~~lid~~G-~ 118 (154)
T 3kcm_A 81 FRKTGFTLPVLLDADKRVGKLYGTT-----------------------------------------GVPETFVIDRHG-V 118 (154)
T ss_dssp HHHHCCCCCEEECTTCHHHHHHTCC-----------------------------------------SBCEEEEECTTS-B
T ss_pred HHHcCCCeeEEecCchHHHHHhCCC-----------------------------------------CCCeEEEECCCC-c
Confidence 99887554 8877777766643 134699999998 9
Q ss_pred EEEEEeCCCCCCCCCHHHHHHHhh
Q 025756 224 ISYIHRDKEAGDDPDIQDILKACC 247 (248)
Q Consensus 224 I~~~h~~~~~~Dh~~i~eIL~al~ 247 (248)
|++.+.+....+.+++.+.|+.+.
T Consensus 119 i~~~~~g~~~~~~~~l~~~l~~l~ 142 (154)
T 3kcm_A 119 ILKKVVGAMEWDHPEVIAFLNNEL 142 (154)
T ss_dssp EEEEEESCCCTTSHHHHHHHHTC-
T ss_pred EEEEEcCCCccccHHHHHHHHHHH
Confidence 999999987778777777777653
No 48
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=99.80 E-value=4.2e-19 Score=151.85 Aligned_cols=120 Identities=15% Similarity=0.129 Sum_probs=103.2
Q ss_pred CccccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeC--------C
Q 025756 68 SEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGP--------G 139 (248)
Q Consensus 68 ~~~~g~~ap~f~L~d~~G~~v~l~~l~~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~--------~ 139 (248)
..++|+++|+|+|.|.+|+.++++++. +++++|++|+..|||+|+.++..|.+.++++++.|+++|+|+. +
T Consensus 31 ~l~~G~~aP~f~l~~~~G~~v~l~~~~-gk~~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~~~~~~~d 109 (218)
T 3u5r_E 31 SITLGTRAADFVLPDAGGNLFTLAEFK-DSPALLVAFISNRCPFVVLIREALAKFAGDYAGQGLAVVAINSNDAQAFPEE 109 (218)
T ss_dssp CCCTTCBCCCCCEECTTCCEECGGGGT-TCSEEEEEECCSSCHHHHTTHHHHHHHHHHHTTTTEEEEEEECSCTTTCGGG
T ss_pred cCCCCCcCCCcEeECCCCCEEeHHHhC-CCCeEEEEEECCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCcccccccC
Confidence 468999999999999999999999975 4467888889999999999999999999999999999999999 6
Q ss_pred CHHHHHHHHhhcCC--CC--CCChHHHHHcCCccccccccCchhhHHHHHHHHhhhhhhccccccccccCCCceeeceEE
Q 025756 140 SVEQARTFSEQTKF--KG--DPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGII 215 (248)
Q Consensus 140 ~~~~~~~f~~~~~f--p~--Dp~~~~y~alGl~~~~~~~~~P~a~~~~~k~~~~g~~~~~~~~~~g~~~~~~~~qlgG~f 215 (248)
+.+.+++|++++++ |+ |++.++.++||+. ..|..|
T Consensus 110 ~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~~v~-----------------------------------------~~P~~~ 148 (218)
T 3u5r_E 110 TLERVGAEVKAYGYGFPYLKDASQSVAKAYGAA-----------------------------------------CTPDFF 148 (218)
T ss_dssp SHHHHHHHHHHHTCCSCEEECTTCHHHHHHTCC-----------------------------------------EESEEE
T ss_pred CHHHHHHHHHHhCCCccEEECCccHHHHHcCCC-----------------------------------------CCCeEE
Confidence 78899999998874 44 8888877777654 134689
Q ss_pred EEeCCCCeEEEEEeC
Q 025756 216 VAGPGKSNISYIHRD 230 (248)
Q Consensus 216 Vvd~gg~~I~~~h~~ 230 (248)
|||++| +|+|....
T Consensus 149 liD~~G-~i~~~g~~ 162 (218)
T 3u5r_E 149 LYDRER-RLVYHGQF 162 (218)
T ss_dssp EECTTC-BEEEEECS
T ss_pred EECCCC-cEEEeccc
Confidence 999998 99987654
No 49
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=99.80 E-value=5.8e-19 Score=143.37 Aligned_cols=151 Identities=14% Similarity=0.185 Sum_probs=112.7
Q ss_pred CCCccccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCCh-hhHHHHHHHHhcHHHHHHCC--CEEEEEeCC---
Q 025756 66 SVSEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCV-LCRKRADYLAAKKDVMDASG--VALVLIGPG--- 139 (248)
Q Consensus 66 ~~~~~~g~~ap~f~L~d~~G~~v~l~~l~~~~~vvlvF~R~~~Cp-~C~~~l~~L~~~~~~l~~~G--v~vV~Is~~--- 139 (248)
....++|+.+|+|+|.|.+|+.++++++ + ++++|++|+..||+ .|+.++..|.+.++++++.| ++||+|+.+
T Consensus 4 ~~~l~~g~~~p~f~l~~~~G~~~~l~~~-~-gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~ 81 (174)
T 1xzo_A 4 QIKDPLNYEVEPFTFQNQDGKNVSLESL-K-GEVWLADFIFTNCETICPPMTAHMTDLQKKLKAENIDVRIISFSVDPEN 81 (174)
T ss_dssp CCCSCCCEECCCCEEECTTSCEEETGGG-T-TCCEEEEEECSCCSSCCCSHHHHHHHHHHHHHHTTCCCEEEEEESCTTT
T ss_pred CCcCccccccCCcEEEcCCCCEEehhhc-C-CCEEEEEEEcCCCcchhHHHHHHHHHHHHHhhhcCCcEEEEEEEeCCCC
Confidence 3457889999999999999999999997 3 35567777899999 99999999999999999887 999999986
Q ss_pred -CHHHHHHHHhhcC--C---CC--CCChHHHHHcCCccccccccCchhhHHHHHHHHhhhhhhccccccccccCCCceee
Q 025756 140 -SVEQARTFSEQTK--F---KG--DPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQ 211 (248)
Q Consensus 140 -~~~~~~~f~~~~~--f---p~--Dp~~~~y~alGl~~~~~~~~~P~a~~~~~k~~~~g~~~~~~~~~~g~~~~~~~~ql 211 (248)
+.+.+++|+++++ | ++ |++.++.++|++..... + +. . ..+ ..+....
T Consensus 82 d~~~~~~~~~~~~~~~~~~~~~l~d~~~~~~~~~~~~~~~~--~---------------~~----~-~~~---~~~~~~~ 136 (174)
T 1xzo_A 82 DKPKQLKKFAANYPLSFDNWDFLTGYSQSEIEEFALKSFKA--I---------------VK----K-PEG---EDQVIHQ 136 (174)
T ss_dssp CCHHHHHHHHTTSCCCGGGEEEEBCSCHHHHHHHHHHHHCC--C---------------CC----C-CSS---CCSCCSC
T ss_pred CCHHHHHHHHHHcCCCCcceEEEeCCCHHHHHHHHHhhcCe--e---------------Ee----e-cCC---CCeeeee
Confidence 6788999999876 4 44 88888777766421000 0 00 0 000 0112346
Q ss_pred ceEEEEeCCCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025756 212 GGIIVAGPGKSNISYIHRDKEAGDDPDIQDILKACC 247 (248)
Q Consensus 212 gG~fVvd~gg~~I~~~h~~~~~~Dh~~i~eIL~al~ 247 (248)
|.+||||++| +|++.|.+... .+.++|++.++
T Consensus 137 p~~~lid~~G-~i~~~~~g~~~---~~~~~l~~~l~ 168 (174)
T 1xzo_A 137 SSFYLVGPDG-KVLKDYNGVEN---TPYDDIISDVK 168 (174)
T ss_dssp CEEEEECTTS-EEEEEEESSSS---CCHHHHHHHHH
T ss_pred eEEEEECCCC-eEEEEEcCCCC---CCHHHHHHHHH
Confidence 7899999998 99999987543 34566666553
No 50
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=99.80 E-value=2.9e-18 Score=134.79 Aligned_cols=126 Identities=13% Similarity=0.139 Sum_probs=100.8
Q ss_pred cccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChhhHHHHHHHHh---cHHHHHHCCCEEEEEeCC-CHHHHH
Q 025756 70 DTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAA---KKDVMDASGVALVLIGPG-SVEQAR 145 (248)
Q Consensus 70 ~~g~~ap~f~L~d~~G~~v~l~~l~~~~~vvlvF~R~~~Cp~C~~~l~~L~~---~~~~l~~~Gv~vV~Is~~-~~~~~~ 145 (248)
++|+++|+|++.|.+|+.++++++ +++++|++|+..||+.|+.++..|.+ .++++++.|+.+|+|+.+ +.+.++
T Consensus 2 ~~G~~~p~f~l~~~~g~~~~l~~~--~gk~vll~F~a~~C~~C~~~~~~l~~~~~l~~~~~~~~~~~v~v~~d~~~~~~~ 79 (142)
T 3ewl_A 2 NAGMKAADFTYVTVHGDNSRMSRL--KAQYTMLFFYDPDCSNCRKFEKLFAEIPAFVEMVENGTLRVLAIYPDENREEWA 79 (142)
T ss_dssp CTTSBCCCCEEECTTCCEEEGGGC--CCSEEEEEECCSSCHHHHHHHHHHHTCHHHHHHHHHTSEEEEEEECSSCHHHHH
T ss_pred CCCCcCCCCEEECCCCCEEEhhhc--CCCEEEEEEECCCCccHHHHHHHHHHhHHHHHHhccCCeEEEEEEecCCHHHHH
Confidence 689999999999999999999997 34677788889999999999999998 899999999999999998 567889
Q ss_pred HHHhhcCCCC----CCChHHHH--HcCCccccccccCchhhHHHHHHHHhhhhhhccccccccccCCCceeeceEEEEeC
Q 025756 146 TFSEQTKFKG----DPNHSSYE--ALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGP 219 (248)
Q Consensus 146 ~f~~~~~fp~----Dp~~~~y~--alGl~~~~~~~~~P~a~~~~~k~~~~g~~~~~~~~~~g~~~~~~~~qlgG~fVvd~ 219 (248)
+|.+++++++ |++..+.. .||+. ..|..||||+
T Consensus 80 ~~~~~~~~~~~~~~d~~~~~~~~~~~~v~-----------------------------------------~~P~~~lid~ 118 (142)
T 3ewl_A 80 TKAVYMPQGWIVGWNKAGDIRTRQLYDIR-----------------------------------------ATPTIYLLDG 118 (142)
T ss_dssp HHHTTSCTTCEEEECTTCHHHHTTCSCCC-----------------------------------------SSSEEEEECT
T ss_pred HHHHHcCCCcceeeCCccchhhHHHcCCC-----------------------------------------CCCeEEEECC
Confidence 9999887555 66655543 22221 2467999999
Q ss_pred CCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025756 220 GKSNISYIHRDKEAGDDPDIQDILKACC 247 (248)
Q Consensus 220 gg~~I~~~h~~~~~~Dh~~i~eIL~al~ 247 (248)
+| +|++. +.+.+++.+.+.
T Consensus 119 ~G-~i~~~--------~~~~~~l~~~l~ 137 (142)
T 3ewl_A 119 RK-RVILK--------DTSMEQLIDYLA 137 (142)
T ss_dssp TC-BEEEC--------SCCHHHHHHHHH
T ss_pred CC-CEEec--------CCCHHHHHHHHH
Confidence 98 89872 245666666554
No 51
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.79 E-value=1.3e-18 Score=143.51 Aligned_cols=139 Identities=16% Similarity=0.214 Sum_probs=111.1
Q ss_pred CccccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCCH--HHHH
Q 025756 68 SEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV--EQAR 145 (248)
Q Consensus 68 ~~~~g~~ap~f~L~d~~G~~v~l~~l~~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~~--~~~~ 145 (248)
..++|+.+|+|++.|.+|+.++++++ + ++.+|++|+..||+.|+.++..|.+.+.++...++++|+|+.+.. +.++
T Consensus 33 ~~~~g~~~p~f~l~~~~G~~~~l~~~-~-gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~ 110 (186)
T 1jfu_A 33 MASAPLKLPDLAFEDADGKPKKLSDF-R-GKTLLVNLWATWCVPCRKEMPALDELQGKLSGPNFEVVAINIDTRDPEKPK 110 (186)
T ss_dssp ECCSCCBCCCCEEECTTSCEEEGGGG-T-TSEEEEEEECTTCHHHHHHHHHHHHHHHHHCBTTEEEEEEECCCSCTTHHH
T ss_pred cccCCCcCCCcEeEcCCCCEeeHHHc-C-CCEEEEEEEeCCCHhHHHHHHHHHHHHHHhccCCcEEEEEECCCCCHHHHH
Confidence 46789999999999999999999997 3 456677777999999999999999999999888999999999864 6789
Q ss_pred HHHhhcC---CCC--CCChHHHHHcCCccccccccCchhhHHHHHHHHhhhhhhccccccccccCCCceeeceEEEEeCC
Q 025756 146 TFSEQTK---FKG--DPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGPG 220 (248)
Q Consensus 146 ~f~~~~~---fp~--Dp~~~~y~alGl~~~~~~~~~P~a~~~~~k~~~~g~~~~~~~~~~g~~~~~~~~qlgG~fVvd~g 220 (248)
+|.++++ ||+ |++..++++||+.... ...|.+||||++
T Consensus 111 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~-------------------------------------~~~P~~~lid~~ 153 (186)
T 1jfu_A 111 TFLKEANLTRLGYFNDQKAKVFQDLKAIGRA-------------------------------------LGMPTSVLVDPQ 153 (186)
T ss_dssp HHHHHTTCCTTCCEECTTCHHHHHHHTTTCC-------------------------------------SSSSEEEEECTT
T ss_pred HHHHHcCCCCCceEECCcchHHHHhcccccc-------------------------------------CCCCEEEEECCC
Confidence 9998876 555 8888888777764210 124679999999
Q ss_pred CCeEEEEEeCCCCCCCCCHHHHHHHh
Q 025756 221 KSNISYIHRDKEAGDDPDIQDILKAC 246 (248)
Q Consensus 221 g~~I~~~h~~~~~~Dh~~i~eIL~al 246 (248)
| +|++.|.+....+..++.+.|+.+
T Consensus 154 G-~i~~~~~g~~~~~~~~l~~~l~~l 178 (186)
T 1jfu_A 154 G-CEIATIAGPAEWASEDALKLIRAA 178 (186)
T ss_dssp S-BEEEEEESCCCTTSHHHHHHHHHH
T ss_pred C-CEEEEEecCCccCHHHHHHHHHHH
Confidence 8 999999886544445555555544
No 52
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=99.79 E-value=1.7e-18 Score=139.43 Aligned_cols=141 Identities=11% Similarity=0.075 Sum_probs=113.2
Q ss_pred cccCCCCCCCccccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeC
Q 025756 59 AVSESPPSVSEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGP 138 (248)
Q Consensus 59 ~~~~~~~~~~~~~g~~ap~f~L~d~~G~~v~l~~l~~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~ 138 (248)
+..........++|+.+|+|++.|.+|+.++++++ ++ +.+|++|+..||+.|+.++..|.+.++++.+.++.+|+|+.
T Consensus 5 ~~~~~~~~~~~~~G~~~p~f~l~~~~g~~~~l~~~-~g-k~vll~F~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~ 82 (158)
T 3hdc_A 5 PGKAESDAPLVRTGALAPNFKLPTLSGENKSLAQY-RG-KIVLVNFWASWCPYCRDEMPSMDRLVKSFPKGDLVVLAVNV 82 (158)
T ss_dssp CCCCCCCSCCCCTTSBCCCCEEECTTSCEEESGGG-TT-SEEEEEEECTTCHHHHHHHHHHHHHHHHSSTTSEEEEEEEC
T ss_pred ccccccCCcccCCCCcCCCceeEcCCCCEEehHHh-CC-CEEEEEEECCcCHHHHHHHHHHHHHHHHcccCCeEEEEEeC
Confidence 33334455667999999999999999999999997 33 45566666999999999999999999999989999999999
Q ss_pred CCHHHHHHHHhhcCCCC----CCChHHHHHcCCccccccccCchhhHHHHHHHHhhhhhhccccccccccCCCceeeceE
Q 025756 139 GSVEQARTFSEQTKFKG----DPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGI 214 (248)
Q Consensus 139 ~~~~~~~~f~~~~~fp~----Dp~~~~y~alGl~~~~~~~~~P~a~~~~~k~~~~g~~~~~~~~~~g~~~~~~~~qlgG~ 214 (248)
+. .+++|.+++++++ |++.++.+.||+. ..|..
T Consensus 83 d~--~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~-----------------------------------------~~P~~ 119 (158)
T 3hdc_A 83 EK--RFPEKYRRAPVSFNFLSDATGQVQQRYGAN-----------------------------------------RLPDT 119 (158)
T ss_dssp SS--SCCGGGGGCCCSCEEEECTTSHHHHHTTCC-----------------------------------------SSSEE
T ss_pred CH--HHHHHHHHcCCCceEEECchHHHHHHhCCC-----------------------------------------CcceE
Confidence 88 5778888777554 8777777766653 13468
Q ss_pred EEEeCCCCeEEEEEeCCCCCCCCCHHHHHHH
Q 025756 215 IVAGPGKSNISYIHRDKEAGDDPDIQDILKA 245 (248)
Q Consensus 215 fVvd~gg~~I~~~h~~~~~~Dh~~i~eIL~a 245 (248)
||||++| +|++.+.+....|.+++.+-++.
T Consensus 120 ~lid~~G-~i~~~~~G~~~~~~~~~~~~~~~ 149 (158)
T 3hdc_A 120 FIVDRKG-IIRQRVTGGIEWDAPKVVSYLKS 149 (158)
T ss_dssp EEECTTS-BEEEEEESCCCTTSHHHHHHHHT
T ss_pred EEEcCCC-CEEEEEeCCCccchHHHHHHHHh
Confidence 9999998 99999999888877766555543
No 53
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=99.78 E-value=3.8e-18 Score=141.50 Aligned_cols=137 Identities=15% Similarity=0.114 Sum_probs=108.4
Q ss_pred CCccccCcCCCcEEe-cCCCCeEeCCCccCCCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeC-------
Q 025756 67 VSEDTKNLLDTVKVY-DVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGP------- 138 (248)
Q Consensus 67 ~~~~~g~~ap~f~L~-d~~G~~v~l~~l~~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~------- 138 (248)
...++|+.+|+|++. |.+|+.++++++. +++.+|++|+..||+.|+.++..|.+.++++.+.|+.+|+|+.
T Consensus 16 ~~~~~g~~~p~f~l~~~~~G~~~~l~~~~-gk~~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~ 94 (196)
T 2ywi_A 16 NMFPLGKQAPPFALTNVIDGNVVRLEDVK-SDAATVIMFICNHCPFVKHVQHELVRLANDYMPKGVSFVAINSNDAEQYP 94 (196)
T ss_dssp CCCCTTCBCCCCEEEETTTCCEEEHHHHC-CSSEEEEEECCSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEECSCTTTCG
T ss_pred cCCCcCCcCCceeeeecCCCCEEeHHHhC-CCCeEEEEEeCCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCcccccc
Confidence 346889999999999 9999999999974 4445777788999999999999999999999989999999998
Q ss_pred -CCHHHHHHHHhhcCCCC----CCChHHHHHcCCccccccccCchhhHHHHHHHHhhhhhhccccccccccCCCceeece
Q 025756 139 -GSVEQARTFSEQTKFKG----DPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGG 213 (248)
Q Consensus 139 -~~~~~~~~f~~~~~fp~----Dp~~~~y~alGl~~~~~~~~~P~a~~~~~k~~~~g~~~~~~~~~~g~~~~~~~~qlgG 213 (248)
++.+.+++|++++++++ |++.++.+.||+. ..|.
T Consensus 95 ~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~-----------------------------------------~~P~ 133 (196)
T 2ywi_A 95 EDSPENMKKVAEELGYPFPYLYDETQEVAKAYDAA-----------------------------------------CTPD 133 (196)
T ss_dssp GGSHHHHHHHHHHHTCCSCEEECSSCHHHHHHTCC-----------------------------------------EESE
T ss_pred ccCHHHHHHHHHHcCCCceEEECCchHHHHHhCCC-----------------------------------------CCCe
Confidence 67889999999877444 7777777666543 1346
Q ss_pred EEEEeCCCCeEEEEEeCCCC----CCCCCHHHHHHHh
Q 025756 214 IIVAGPGKSNISYIHRDKEA----GDDPDIQDILKAC 246 (248)
Q Consensus 214 ~fVvd~gg~~I~~~h~~~~~----~Dh~~i~eIL~al 246 (248)
.||||++| +|+|.+...+. ....+.+++.+++
T Consensus 134 ~~lid~~G-~i~~~~~~~~~~~~~~g~~~~~~l~~~i 169 (196)
T 2ywi_A 134 FYIFDRDL-KCVYRGQLDDSRPNNGIPVTGESIRAAL 169 (196)
T ss_dssp EEEEETTC-BEEEEECSSSCCTTTCCCCCCHHHHHHH
T ss_pred EEEEcCCC-eEEEccccCcccccccCccCHHHHHHHH
Confidence 89999998 99999875432 2233445555544
No 54
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=99.78 E-value=6.8e-18 Score=133.32 Aligned_cols=128 Identities=10% Similarity=0.050 Sum_probs=100.2
Q ss_pred CccccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChhhHHHHHHHHh---cHHHHHHCCCEEEEEeCCCH-HH
Q 025756 68 SEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAA---KKDVMDASGVALVLIGPGSV-EQ 143 (248)
Q Consensus 68 ~~~~g~~ap~f~L~d~~G~~v~l~~l~~~~~vvlvF~R~~~Cp~C~~~l~~L~~---~~~~l~~~Gv~vV~Is~~~~-~~ 143 (248)
...+|+++|+|++.|.+|+.++++++. ++.+|++|+..||++|+.++..|.+ .++++++.|+.+|+|+.++. +.
T Consensus 4 ~~~~G~~ap~f~l~~~~g~~~~l~~~~--gk~vll~F~a~wC~~C~~~~~~l~~~~~l~~~~~~~~~~vi~i~~d~~~~~ 81 (142)
T 3eur_A 4 KNRLGTKALNFTYTLDSGVKGTLYQFP--AEYTLLFINNPGCHACAEMIEGLKASPVINGFTAAKKLKVLSIYPDEELDE 81 (142)
T ss_dssp TTCTTSBCCCCEEEETTSCEEETTTCC--CSEEEEEECCSSSHHHHHHHHHHHHCHHHHHHHHTTSEEEEEEECSSCHHH
T ss_pred hhcCCCccCCcEEEcCCCCEeeHHHcC--CCEEEEEEECCCCccHHHHHHHHhhhHHHHHHhccCCeEEEEEEcCCCHHH
Confidence 357899999999999999999999974 3567777889999999999999999 89999999999999999876 56
Q ss_pred HHHHHhhcCCCC----CCChH--HHHHcCCccccccccCchhhHHHHHHHHhhhhhhccccccccccCCCceeeceEEEE
Q 025756 144 ARTFSEQTKFKG----DPNHS--SYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVA 217 (248)
Q Consensus 144 ~~~f~~~~~fp~----Dp~~~--~y~alGl~~~~~~~~~P~a~~~~~k~~~~g~~~~~~~~~~g~~~~~~~~qlgG~fVv 217 (248)
.++|.+++++++ |++.. +.+.|| ...+|.+|||
T Consensus 82 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-----------------------------------------v~~~P~~~li 120 (142)
T 3eur_A 82 WKKHRNDFAKEWTNGYDKELVIKNKNLYD-----------------------------------------LRAIPTLYLL 120 (142)
T ss_dssp HHHHGGGSCTTSEEEECTTCHHHHTTCSC-----------------------------------------CTTCSEEEEE
T ss_pred HHHHHHhcccccccccCccchhhhhhhcC-----------------------------------------CCcCCeEEEE
Confidence 788888776544 44432 111111 1236789999
Q ss_pred eCCCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025756 218 GPGKSNISYIHRDKEAGDDPDIQDILKACC 247 (248)
Q Consensus 218 d~gg~~I~~~h~~~~~~Dh~~i~eIL~al~ 247 (248)
|++| +|++.+.+ .++|.+.++
T Consensus 121 d~~G-~i~~~~~~--------~~~l~~~l~ 141 (142)
T 3eur_A 121 DKNK-TVLLKDAT--------LQKVEQYLA 141 (142)
T ss_dssp CTTC-BEEEEEEC--------HHHHHHHHH
T ss_pred CCCC-cEEecCCC--------HHHHHHHHh
Confidence 9998 99998863 466666554
No 55
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=99.77 E-value=3.1e-18 Score=140.95 Aligned_cols=139 Identities=12% Similarity=0.147 Sum_probs=104.9
Q ss_pred cccCcCC-CcEEecCCCCeEeCCCccCCCeEEEEEEcCCCCh-hhHHHHHHHHhcHHHHHH--CCCEEEEEeCC---CHH
Q 025756 70 DTKNLLD-TVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCV-LCRKRADYLAAKKDVMDA--SGVALVLIGPG---SVE 142 (248)
Q Consensus 70 ~~g~~ap-~f~L~d~~G~~v~l~~l~~~~~vvlvF~R~~~Cp-~C~~~l~~L~~~~~~l~~--~Gv~vV~Is~~---~~~ 142 (248)
.+|+++| +|+|.|.+|+.++++++. ++++|++|+..||| .|..++..|++.++++++ .++++|+|+.+ +++
T Consensus 2 ~~G~~~P~~f~l~d~~G~~v~l~~~~--Gk~vll~F~~t~C~~~C~~~~~~l~~~~~~~~~~~~~~~vv~is~d~~d~~~ 79 (170)
T 3me7_A 2 SLGTYVPGDITLVDSYGNEFQLKNLK--GKPIILSPIYTHCRAACPLITKSLLKVIPKLGTPGKDFWVITFTFDPKDTLE 79 (170)
T ss_dssp CTTCBCCTTCEEEETTCCEEEGGGGT--TSCEEEEEECTTCCSHHHHHHHHHHTTHHHHCCBTTTBEEEEEECCTTCCHH
T ss_pred CCCCcCCCCeEEEcCCcCEEchHHhC--CCEEEEEEECCCCCchhHHHHHHHHHHHHHhhhcCCceEEEEEECCCCCCHH
Confidence 5799999 999999999999999974 45788888999997 799999999999999975 56999999976 678
Q ss_pred HHHHHHhhcCCCC---------C--CChHHHHHcCCccccccccCchhhHHHHHHHHhhhhhhccccccccccCCCceee
Q 025756 143 QARTFSEQTKFKG---------D--PNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQ 211 (248)
Q Consensus 143 ~~~~f~~~~~fp~---------D--p~~~~y~alGl~~~~~~~~~P~a~~~~~k~~~~g~~~~~~~~~~g~~~~~~~~ql 211 (248)
.+++|+++++.++ | ...++.++||+.... . ..+....
T Consensus 80 ~~~~~~~~~~~~~~~w~~l~~~~~~~~~~~~~~~g~~~~~----------------------------~----~~~~~~~ 127 (170)
T 3me7_A 80 DIKRFQKEYGIDGKGWKVVKAKTSEDLFKLLDAIDFRFMT----------------------------A----GNDFIHP 127 (170)
T ss_dssp HHHHHHHHTTCCSSSEEEEEESSHHHHHHHHHHTTCCCEE----------------------------E----TTEEECC
T ss_pred HHHHHHHHcCCCCCCeEEEeCCCHHHHHHHHHHCCeEEec----------------------------C----CCccccC
Confidence 8999999876332 1 123344444433110 0 0111345
Q ss_pred ceEEEEeCCCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025756 212 GGIIVAGPGKSNISYIHRDKEAGDDPDIQDILKACC 247 (248)
Q Consensus 212 gG~fVvd~gg~~I~~~h~~~~~~Dh~~i~eIL~al~ 247 (248)
+.+||||++| +|++.|.+. .++.++|++++.
T Consensus 128 ~~~~lID~~G-~i~~~~~g~----~~~~~~i~~~l~ 158 (170)
T 3me7_A 128 NVVVVLSPEL-QIKDYIYGV----NYNYLEFVNALR 158 (170)
T ss_dssp CEEEEECTTS-BEEEEEESS----SCCHHHHHHHHH
T ss_pred ceEEEECCCC-eEEEEEeCC----CCCHHHHHHHHH
Confidence 6899999998 999998664 356888887764
No 56
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=99.77 E-value=7.7e-18 Score=135.47 Aligned_cols=130 Identities=12% Similarity=0.140 Sum_probs=101.7
Q ss_pred CccccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCCH-HHHHH
Q 025756 68 SEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV-EQART 146 (248)
Q Consensus 68 ~~~~g~~ap~f~L~d~~G~~v~l~~l~~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~~-~~~~~ 146 (248)
....|+.+|+|++.|.+|+.++++++. + +++|++|+..||+.|+.++..|.+.++++++.|+.+|+|+.++. +..++
T Consensus 8 ~~~~g~~~p~f~l~~~~G~~~~l~~~~-g-k~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~i~~d~~~~~~~~ 85 (152)
T 2lrt_A 8 DKIKEASIIDIQLKDLKGNTRSLTDLK-G-KVVLIDFTVYNNAMSAAHNLALRELYNKYASQGFEIYQISLDGDEHFWKT 85 (152)
T ss_dssp SSSCTTCSCCCCEEBTTSCEECTTTGG-G-SEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECSCCHHHHHH
T ss_pred hhccCCCCCCeEEEcCCCCEEeHHHhC-C-CEEEEEEEcCCChhhHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHHHH
Confidence 346789999999999999999999973 3 45666666799999999999999999999999999999999876 45677
Q ss_pred HHhhcCCCC--CCChH---HHHHcCCccccccccCchhhHHHHHHHHhhhhhhccccccccccCCCceeeceEEEEeCCC
Q 025756 147 FSEQTKFKG--DPNHS---SYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGPGK 221 (248)
Q Consensus 147 f~~~~~fp~--Dp~~~---~y~alGl~~~~~~~~~P~a~~~~~k~~~~g~~~~~~~~~~g~~~~~~~~qlgG~fVvd~gg 221 (248)
|.+..+|++ |++.. +.+.||+. ..|.+||||++|
T Consensus 86 ~~~~~~~~~~~d~~~~~~~~~~~~~v~-----------------------------------------~~P~~~lid~~G 124 (152)
T 2lrt_A 86 SADNLPWVCVRDANGAYSSYISLYNVT-----------------------------------------NLPSVFLVNRNN 124 (152)
T ss_dssp HHTTCSSEEEECSSGGGCHHHHHHTCC-----------------------------------------SCSEEEEEETTT
T ss_pred HHhCCCceEEECCCCcchHHHHHcCcc-----------------------------------------cCceEEEECCCC
Confidence 777666665 77765 55554432 135799999998
Q ss_pred CeEEEEEeCCCCCCCCCHHHHHHHh
Q 025756 222 SNISYIHRDKEAGDDPDIQDILKAC 246 (248)
Q Consensus 222 ~~I~~~h~~~~~~Dh~~i~eIL~al 246 (248)
+|++.+.+ ..++++.+..+
T Consensus 125 -~i~~~~~g-----~~~~e~~~~~~ 143 (152)
T 2lrt_A 125 -ELSARGEN-----IKDLDEAIKKL 143 (152)
T ss_dssp -EEEEETTT-----CSCHHHHHHHH
T ss_pred -eEEEecCC-----HHHHHHHHHHH
Confidence 99988764 24566666544
No 57
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=99.77 E-value=1.8e-17 Score=136.36 Aligned_cols=133 Identities=20% Similarity=0.236 Sum_probs=105.9
Q ss_pred CccccCcCCCcEEecC--CCCeEeCCCccCCCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCC------EEEEEeCC
Q 025756 68 SEDTKNLLDTVKVYDV--NGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGV------ALVLIGPG 139 (248)
Q Consensus 68 ~~~~g~~ap~f~L~d~--~G~~v~l~~l~~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv------~vV~Is~~ 139 (248)
..+.|+++|+|++.|. +|+.++++++ + ++++|++|+..||+.|+.++..|.+.++++++.|+ .+|+|+.+
T Consensus 30 ~~~~g~~~p~f~l~~~~~~g~~~~l~~~-~-gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~~~~~v~~v~v~~d 107 (183)
T 3lwa_A 30 DEADRQQLPDIGGDSLMEEGTQINLSDF-E-NQVVILNAWGQWCAPCRSESDDLQIIHEELQAAGNGDTPGGTVLGINVR 107 (183)
T ss_dssp CGGGCCCCCCCEEEBSSSTTCEEEGGGG-T-TSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHCC---CCSEEEEEEECS
T ss_pred ccccCCCCCceeccccccCCcEecHHHh-C-CCEEEEEEECCcCHhHHHHHHHHHHHHHHHHhcCCCccCCcEEEEEECC
Confidence 3578999999999999 9999999997 3 35667777799999999999999999999999999 99999998
Q ss_pred C--HHHHHHHHhhcCCCC----CCChHHHHHcCCccccccccCchhhHHHHHHHHhhhhhhccccccccccCCCceeece
Q 025756 140 S--VEQARTFSEQTKFKG----DPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGG 213 (248)
Q Consensus 140 ~--~~~~~~f~~~~~fp~----Dp~~~~y~alGl~~~~~~~~~P~a~~~~~k~~~~g~~~~~~~~~~g~~~~~~~~qlgG 213 (248)
+ .+.+++|++++++++ |++..+.+.||.. . . ...|.
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-~----------------------------v---------~~~P~ 149 (183)
T 3lwa_A 108 DYSRDIAQDFVTDNGLDYPSIYDPPFMTAASLGGV-P----------------------------A---------SVIPT 149 (183)
T ss_dssp CCCHHHHHHHHHHTTCCSCEEECTTCGGGGGTTTC-C----------------------------T---------TCCSE
T ss_pred CCCHHHHHHHHHHcCCCccEEECCcchHHHHhccC-C----------------------------C---------CCCCe
Confidence 7 788999999887544 8877766666521 0 0 12467
Q ss_pred EEEEeCCCCeEEEEEeCCCCCCCCCHHHHHHHh
Q 025756 214 IIVAGPGKSNISYIHRDKEAGDDPDIQDILKAC 246 (248)
Q Consensus 214 ~fVvd~gg~~I~~~h~~~~~~Dh~~i~eIL~al 246 (248)
+||||++| +|++.|.+. .+.+++.+.+
T Consensus 150 ~~lid~~G-~i~~~~~g~-----~~~~~l~~~l 176 (183)
T 3lwa_A 150 TIVLDKQH-RPAAVFLRE-----VTSKDVLDVA 176 (183)
T ss_dssp EEEECTTS-CEEEEECSC-----CCHHHHHHHH
T ss_pred EEEECCCC-cEEEEEcCC-----CCHHHHHHHH
Confidence 99999998 999988753 3455665544
No 58
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=99.77 E-value=4.1e-18 Score=134.74 Aligned_cols=86 Identities=10% Similarity=-0.011 Sum_probs=70.8
Q ss_pred CCCccccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCC-CHHHH
Q 025756 66 SVSEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG-SVEQA 144 (248)
Q Consensus 66 ~~~~~~g~~ap~f~L~d~~G~~v~l~~l~~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~-~~~~~ 144 (248)
....++|+.+|+|++ |.+|+.++++++ +++++|++|+..||+.|+.++..|.+.++++++.|+.+|+|+.+ +.+..
T Consensus 4 ~~~l~~G~~~P~f~l-~~~g~~~~l~~~--~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~ 80 (143)
T 4fo5_A 4 TEGVNPGDLAPRIEF-LGNDAKASFHNQ--LGRYTLLNFWAAYDAESRARNVQLANEVNKFGPDKIAMCSISMDEKESIF 80 (143)
T ss_dssp CBSSSTTSBCCCCCC------CCCSCCS--SCCEEEEEEECTTCHHHHHHHHHHHHHHTTSCTTTEEEEEEECCSCHHHH
T ss_pred ccccCCcccCCceEE-cCCCCEEEHHHh--CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCcCCEEEEEEEccCCHHHH
Confidence 345789999999999 999999999997 34677888899999999999999999999999889999999999 45688
Q ss_pred HHHHhhcCCC
Q 025756 145 RTFSEQTKFK 154 (248)
Q Consensus 145 ~~f~~~~~fp 154 (248)
++|.++++++
T Consensus 81 ~~~~~~~~~~ 90 (143)
T 4fo5_A 81 TETVKIDKLD 90 (143)
T ss_dssp HHHHHHHTCC
T ss_pred HHHHHHhCCC
Confidence 8999877643
No 59
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=99.76 E-value=7.7e-18 Score=139.26 Aligned_cols=88 Identities=10% Similarity=0.112 Sum_probs=76.9
Q ss_pred CCCCccccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCC-----
Q 025756 65 PSVSEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG----- 139 (248)
Q Consensus 65 ~~~~~~~g~~ap~f~L~d~~G~~v~l~~l~~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~----- 139 (248)
+....++|+.+|+|++.|.+|+.++++++ +++++|++|+..||++|+.++..|.+.++++++.|++||+|+.+
T Consensus 17 ~~~~~~~g~~~p~f~l~~~~G~~~~l~~~--~gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~ 94 (183)
T 2obi_A 17 SRDDWRCARSMHEFSAKDIDGHMVNLDKY--RGFVCIVTNVASQCGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGKQ 94 (183)
T ss_dssp --CCGGGCCSGGGCEEEBTTSCEEEGGGG--TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTC
T ss_pred cccCCcccCcccceEEEcCCCCEeeHHHc--CCCEEEEEEeCCCCCCcHHHHHHHHHHHHHHhcCCeEEEEEECCCCCCC
Confidence 44567999999999999999999999997 34577888899999999999999999999999999999999964
Q ss_pred ---CHHHHHHHHhhcCCC
Q 025756 140 ---SVEQARTFSEQTKFK 154 (248)
Q Consensus 140 ---~~~~~~~f~~~~~fp 154 (248)
+.+.+++|+++++++
T Consensus 95 e~~~~~~~~~~~~~~~~~ 112 (183)
T 2obi_A 95 EPGSNEEIKEFAAGYNVK 112 (183)
T ss_dssp CCSCHHHHHHHHHTTTCC
T ss_pred CCCCHHHHHHHHHHcCCC
Confidence 678899999887644
No 60
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=99.76 E-value=1.9e-17 Score=131.54 Aligned_cols=118 Identities=20% Similarity=0.267 Sum_probs=97.1
Q ss_pred cccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCC-CHHHHHHHH
Q 025756 70 DTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG-SVEQARTFS 148 (248)
Q Consensus 70 ~~g~~ap~f~L~d~~G~~v~l~~l~~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~-~~~~~~~f~ 148 (248)
++|+.+|+|++.|.+|+.++++++ ++ +.+|++|+..||+.|+.++..|.+.++++.+.|+.+|+|+.+ +.+.+++|+
T Consensus 1 ~~G~~~p~~~l~~~~g~~~~l~~~-~g-k~vlv~F~~~~C~~C~~~~~~l~~~~~~~~~~~v~vv~v~~d~~~~~~~~~~ 78 (151)
T 2f9s_A 1 SEGSDAPNFVLEDTNGKRIELSDL-KG-KGVFLNFWGTWCEPCKKEFPYMANQYKHFKSQGVEIVAVNVGESKIAVHNFM 78 (151)
T ss_dssp -CCEECCCCEEECTTCCEEEGGGG-TT-SEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCHHHHHHHH
T ss_pred CCCCcCCcceeEcCCCCEEEHHHc-CC-CEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHHHH
Confidence 468999999999999999999997 34 455666669999999999999999999999899999999986 457889999
Q ss_pred hhcCCCC----CCChHHHHHcCCccccccccCchhhHHHHHHHHhhhhhhccccccccccCCCceeeceEEEEeCCCCeE
Q 025756 149 EQTKFKG----DPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGPGKSNI 224 (248)
Q Consensus 149 ~~~~fp~----Dp~~~~y~alGl~~~~~~~~~P~a~~~~~k~~~~g~~~~~~~~~~g~~~~~~~~qlgG~fVvd~gg~~I 224 (248)
+++++++ |++..+.+.||+. ..|..||+|++| +|
T Consensus 79 ~~~~~~~~~~~d~~~~~~~~~~v~-----------------------------------------~~P~~~lid~~G-~i 116 (151)
T 2f9s_A 79 KSYGVNFPVVLDTDRQVLDAYDVS-----------------------------------------PLPTTFLINPEG-KV 116 (151)
T ss_dssp HHHTCCSCEEEETTSHHHHHTTCC-----------------------------------------SSCEEEEECTTS-EE
T ss_pred HHcCCCceEEECCchHHHHhcCCC-----------------------------------------CCCeEEEECCCC-cE
Confidence 9887544 7777777666643 134689999998 99
Q ss_pred EEEEeCC
Q 025756 225 SYIHRDK 231 (248)
Q Consensus 225 ~~~h~~~ 231 (248)
++.+.+.
T Consensus 117 ~~~~~G~ 123 (151)
T 2f9s_A 117 VKVVTGT 123 (151)
T ss_dssp EEEEESC
T ss_pred EEEEeCC
Confidence 9988763
No 61
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=99.76 E-value=1.1e-17 Score=133.51 Aligned_cols=129 Identities=20% Similarity=0.263 Sum_probs=100.1
Q ss_pred ccccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCC-HHHHHHH
Q 025756 69 EDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS-VEQARTF 147 (248)
Q Consensus 69 ~~~g~~ap~f~L~d~~G~~v~l~~l~~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~-~~~~~~f 147 (248)
.++|+.+|+|++.|.+|+.++++++ + ++++|++|+..||+.|+.++..|.+.++++.+.|+.+|+|+.+. .+..++|
T Consensus 3 l~~g~~~p~f~l~~~~G~~~~l~~~-~-gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~ 80 (152)
T 2lrn_A 3 LATGSVAPAITGIDLKGNSVSLNDF-K-GKYVLVDFWFAGCSWCRKETPYLLKTYNAFKDKGFTIYGVSTDRREEDWKKA 80 (152)
T ss_dssp SCTTEECCCCEEECSSSCEEESGGG-T-TSEEEEEEECTTCTTHHHHHHHHHHHHHHHTTTTEEEEEEECCSCHHHHHHH
T ss_pred ccCCCcCCCceeEcCCCCEEeHHHc-C-CCEEEEEEECCCChhHHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHHHHH
Confidence 5789999999999999999999997 3 34666667799999999999999999999998999999999885 5778889
Q ss_pred HhhcCCCC----CC---ChHHHHHcCCccccccccCchhhHHHHHHHHhhhhhhccccccccccCCCceeeceEEEEeCC
Q 025756 148 SEQTKFKG----DP---NHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGPG 220 (248)
Q Consensus 148 ~~~~~fp~----Dp---~~~~y~alGl~~~~~~~~~P~a~~~~~k~~~~g~~~~~~~~~~g~~~~~~~~qlgG~fVvd~g 220 (248)
.+++++++ |+ +.++.+.||+. ..|..||+|++
T Consensus 81 ~~~~~~~~~~~~d~~~~~~~~~~~~~v~-----------------------------------------~~P~~~lid~~ 119 (152)
T 2lrn_A 81 IEEDKSYWNQVLLQKDDVKDVLESYCIV-----------------------------------------GFPHIILVDPE 119 (152)
T ss_dssp HHHHTCCSEEEEECHHHHHHHHHHTTCC-----------------------------------------SSCEEEEECTT
T ss_pred HHHhCCCCeEEecccchhHHHHHHhCCC-----------------------------------------cCCeEEEECCC
Confidence 88776554 55 33444443332 24578999999
Q ss_pred CCeEEEEEeCCCCCCCCCHHHHHHHh
Q 025756 221 KSNISYIHRDKEAGDDPDIQDILKAC 246 (248)
Q Consensus 221 g~~I~~~h~~~~~~Dh~~i~eIL~al 246 (248)
| +|++.+.+ ..++++.|+.+
T Consensus 120 G-~i~~~~~~-----~~~l~~~l~~l 139 (152)
T 2lrn_A 120 G-KIVAKELR-----GDDLYNTVEKF 139 (152)
T ss_dssp S-EEEEECCC-----TTHHHHHHHHH
T ss_pred C-eEEEeeCC-----HHHHHHHHHHH
Confidence 8 99998742 23455555544
No 62
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=99.76 E-value=1.2e-17 Score=133.13 Aligned_cols=118 Identities=10% Similarity=-0.002 Sum_probs=98.3
Q ss_pred CccccCcCCCcEEecCCCCeEeCC--CccCCCeEEEEEEcCCCChh--hHHHHHHHHhcHHHH-HHCCCEEEEEeCCCH-
Q 025756 68 SEDTKNLLDTVKVYDVNGNAIPIS--DLWKDRKAVVAFARHFGCVL--CRKRADYLAAKKDVM-DASGVALVLIGPGSV- 141 (248)
Q Consensus 68 ~~~~g~~ap~f~L~d~~G~~v~l~--~l~~~~~vvlvF~R~~~Cp~--C~~~l~~L~~~~~~l-~~~Gv~vV~Is~~~~- 141 (248)
..++|+++|+|++.|.+|+.++++ ++ +++++|++|+..||+. |+.++..|.+.++++ +..|+.+|+|+.++.
T Consensus 4 ~l~~G~~~p~f~l~~~~g~~~~l~~~~~--~gk~vll~F~a~~C~~v~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~ 81 (150)
T 3fw2_A 4 KSEIGKYAPFFSLPNAKGEKITRSSDAF--KQKSLLINFWASWNDSISQKQSNSELREIYKKYKKNKYIGMLGISLDVDK 81 (150)
T ss_dssp TTSTTSBCCCCCEEBTTCCEECTTSTTT--TTSEEEEEEECTTCCCHHHHHHHHHHHHHHHHHTTCSSEEEEEEECCSCH
T ss_pred cccCCCcCCccEeECCCCCEEecchhhh--CCCEEEEEEEeCCCCchHHHHHHHHHHHHHHHhccCCCeEEEEEEcCCCH
Confidence 468899999999999999999999 87 3457777888899999 999999999999999 888999999999965
Q ss_pred HHHHHHHhhcCCCC----CC---ChHHHHHcCCccccccccCchhhHHHHHHHHhhhhhhccccccccccCCCceeeceE
Q 025756 142 EQARTFSEQTKFKG----DP---NHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGI 214 (248)
Q Consensus 142 ~~~~~f~~~~~fp~----Dp---~~~~y~alGl~~~~~~~~~P~a~~~~~k~~~~g~~~~~~~~~~g~~~~~~~~qlgG~ 214 (248)
+.+++|.+++++++ |+ +.++.+.||+. ..|..
T Consensus 82 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~-----------------------------------------~~P~~ 120 (150)
T 3fw2_A 82 QQWKDAIKRDTLDWEQVCDFGGLNSEVAKQYSIY-----------------------------------------KIPAN 120 (150)
T ss_dssp HHHHHHHHHTTCCSEEECCSCGGGCHHHHHTTCC-----------------------------------------SSSEE
T ss_pred HHHHHHHHHhCCCceEEEcCcccchHHHHHcCCC-----------------------------------------ccCeE
Confidence 78899999887554 66 34555555442 23579
Q ss_pred EEEeCCCCeEEEEEe
Q 025756 215 IVAGPGKSNISYIHR 229 (248)
Q Consensus 215 fVvd~gg~~I~~~h~ 229 (248)
||||++| +|++.+.
T Consensus 121 ~lid~~G-~i~~~~~ 134 (150)
T 3fw2_A 121 ILLSSDG-KILAKNL 134 (150)
T ss_dssp EEECTTS-BEEEESC
T ss_pred EEECCCC-EEEEccC
Confidence 9999998 9999884
No 63
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=99.76 E-value=2.8e-18 Score=134.82 Aligned_cols=130 Identities=15% Similarity=0.066 Sum_probs=106.0
Q ss_pred CccccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCC-CHHHHHH
Q 025756 68 SEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG-SVEQART 146 (248)
Q Consensus 68 ~~~~g~~ap~f~L~d~~G~~v~l~~l~~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~-~~~~~~~ 146 (248)
..++|+.+|+|++.|.+|+.++++++ +++.+|++|+..||+.|+.++..|.+.++++.+.|+.+|+|+.+ +.+.+++
T Consensus 4 ~~~~G~~~p~~~l~~~~g~~~~l~~~--~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~ 81 (148)
T 3hcz_A 4 PLLLGKKAPNLYMTDTTGTYRYLYDV--QAKYTILFFWDSQCGHCQQETPKLYDWWLKNRAKGIQVYAANIERKDEEWLK 81 (148)
T ss_dssp CCCTTSBCCCCCCBCTTSCBCCGGGC--CCSEEEEEEECGGGCTTCSHHHHHHHHHHHHGGGTEEEEEEECCSSSHHHHH
T ss_pred ccCCCCcCCceEEecCCCCEEEhHHc--CCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCEEEEEEEecCCHHHHHH
Confidence 36889999999999999999999997 34567777779999999999999999999999999999999999 5578999
Q ss_pred HHhhcCCC-C----CCChH--HHHHcCCccccccccCchhhHHHHHHHHhhhhhhccccccccccCCCceeeceEEEEeC
Q 025756 147 FSEQTKFK-G----DPNHS--SYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGP 219 (248)
Q Consensus 147 f~~~~~fp-~----Dp~~~--~y~alGl~~~~~~~~~P~a~~~~~k~~~~g~~~~~~~~~~g~~~~~~~~qlgG~fVvd~ 219 (248)
|.++++++ + |++.. +.+.||+. ..|..||+|+
T Consensus 82 ~~~~~~~~~~~~~~d~~~~~~~~~~~~i~-----------------------------------------~~P~~~lid~ 120 (148)
T 3hcz_A 82 FIRSKKIGGWLNVRDSKNHTDFKITYDIY-----------------------------------------ATPVLYVLDK 120 (148)
T ss_dssp HHHHHTCTTSEEEECTTCCCCHHHHHCCC-----------------------------------------SSCEEEEECT
T ss_pred HHHHcCCCCceEEeccccchhHHHhcCcC-----------------------------------------CCCEEEEECC
Confidence 99988765 3 66655 55544432 2457999999
Q ss_pred CCCeEEEEEeCCCCCCCCCHHHHHHHh
Q 025756 220 GKSNISYIHRDKEAGDDPDIQDILKAC 246 (248)
Q Consensus 220 gg~~I~~~h~~~~~~Dh~~i~eIL~al 246 (248)
+| +|.+.+.+. .+++++++.+
T Consensus 121 ~G-~i~~~~~g~-----~~~~~~l~~l 141 (148)
T 3hcz_A 121 NK-VIIAKRIGY-----ENLDDFLVQY 141 (148)
T ss_dssp TC-BEEEESCCG-----GGHHHHHHHH
T ss_pred CC-cEEEecCCH-----HHHHHHHHHH
Confidence 98 999887543 6777777765
No 64
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=99.75 E-value=1.4e-17 Score=133.07 Aligned_cols=117 Identities=12% Similarity=0.139 Sum_probs=95.6
Q ss_pred ccCcCCCcEEec--CCCCeEeCCCccCCCeEEEEEEcCCCChhhHHH-HHHHHhcHHHHHHCCCEEEEEeC-------CC
Q 025756 71 TKNLLDTVKVYD--VNGNAIPISDLWKDRKAVVAFARHFGCVLCRKR-ADYLAAKKDVMDASGVALVLIGP-------GS 140 (248)
Q Consensus 71 ~g~~ap~f~L~d--~~G~~v~l~~l~~~~~vvlvF~R~~~Cp~C~~~-l~~L~~~~~~l~~~Gv~vV~Is~-------~~ 140 (248)
.|+.+|+|++.| .+|+.++++++. ++++|++|+..||+.|+.+ +..|.+.++++.+.|+.+|+|+. ++
T Consensus 2 ~g~~aP~f~l~~~~~~g~~~~l~~~~--gk~vlv~f~a~wC~~C~~~~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~ 79 (158)
T 3eyt_A 2 NAMKAPELQIQQWFNSATDLTLADLR--GKVIVIEAFQMLCPGCVMHGIPLAQKVRAAFPEDKVAVLGLHTVFEHHEAMT 79 (158)
T ss_dssp CCEECCCCCEEEEESCSSCCCTGGGT--TSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSC
T ss_pred CCCcCCCceehhhhcCCCccCHHHhC--CCEEEEEEECCcCcchhhhhhHHHHHHHHHhCcCCEEEEEEEecccccccCC
Confidence 588999999999 489999999973 4577777789999999997 99999999999988999999995 58
Q ss_pred HHHHHHHHhhcCCCC----CCCh-----HHHHHcCCccccccccCchhhHHHHHHHHhhhhhhccccccccccCCCceee
Q 025756 141 VEQARTFSEQTKFKG----DPNH-----SSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQ 211 (248)
Q Consensus 141 ~~~~~~f~~~~~fp~----Dp~~-----~~y~alGl~~~~~~~~~P~a~~~~~k~~~~g~~~~~~~~~~g~~~~~~~~ql 211 (248)
.+.+++|++++++++ |++. ++.+.||+. ..
T Consensus 80 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~-----------------------------------------~~ 118 (158)
T 3eyt_A 80 PISLKAFLHEYRIKFPVGVDQPGDGAMPRTMAAYQMR-----------------------------------------GT 118 (158)
T ss_dssp HHHHHHHHHHTTCCSCEEEECCCSSSSCHHHHHTTCC-----------------------------------------SS
T ss_pred HHHHHHHHHHcCCCceEEEcCccchhhHHHHHHcCCC-----------------------------------------CC
Confidence 889999999887544 6555 344444432 24
Q ss_pred ceEEEEeCCCCeEEEEEeCC
Q 025756 212 GGIIVAGPGKSNISYIHRDK 231 (248)
Q Consensus 212 gG~fVvd~gg~~I~~~h~~~ 231 (248)
|.+||||++| +|++.+.+.
T Consensus 119 P~~~lid~~G-~i~~~~~g~ 137 (158)
T 3eyt_A 119 PSLLLIDKAG-DLRAHHFGD 137 (158)
T ss_dssp SEEEEECTTS-EEEEEEESC
T ss_pred CEEEEECCCC-CEEEEEeCC
Confidence 5799999998 999999864
No 65
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=99.75 E-value=2.2e-17 Score=131.04 Aligned_cols=128 Identities=12% Similarity=0.165 Sum_probs=103.2
Q ss_pred cccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEe--CCCHHHHHHH
Q 025756 70 DTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIG--PGSVEQARTF 147 (248)
Q Consensus 70 ~~g~~ap~f~L~d~~G~~v~l~~l~~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is--~~~~~~~~~f 147 (248)
.+|+.+|+|++.|.+|+.++++++ ++ +.+|++|+..||+.|+.++..|.+.++++...|+.+|+|+ .++.+.+++|
T Consensus 3 ~~G~~~p~~~l~~~~g~~~~l~~~-~g-k~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~ 80 (153)
T 2l5o_A 3 LDSKTAPAFSLPDLHGKTVSNADL-QG-KVTLINFWFPSCPGCVSEMPKIIKTANDYKNKNFQVLAVAQPIDPIESVRQY 80 (153)
T ss_dssp -CCTTCCSCEEECTTSCEEEHHHH-TT-CEEEEEEECTTCTTHHHHHHHHHHHHHHGGGTTEEEEEEECTTSCHHHHHHH
T ss_pred CCCCCCCCcEeecCCCCCccHHHh-CC-CEEEEEEECCCCccHHHHHHHHHHHHHHhccCCeEEEEEecCCCCHHHHHHH
Confidence 579999999999999999999997 34 4556666699999999999999999999999999999999 5677899999
Q ss_pred HhhcCCCC----CCChHHHHHcCCccccccccCchhhHHHHHHHHhhhhhhccccccccccCCCceeeceEEEEeCCCCe
Q 025756 148 SEQTKFKG----DPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGPGKSN 223 (248)
Q Consensus 148 ~~~~~fp~----Dp~~~~y~alGl~~~~~~~~~P~a~~~~~k~~~~g~~~~~~~~~~g~~~~~~~~qlgG~fVvd~gg~~ 223 (248)
++++++++ |++.++.+.||+. ..|..||+|++| +
T Consensus 81 ~~~~~~~~~~~~d~~~~~~~~~~i~-----------------------------------------~~P~~~lid~~G-~ 118 (153)
T 2l5o_A 81 VKDYGLPFTVMYDADKAVGQAFGTQ-----------------------------------------VYPTSVLIGKKG-E 118 (153)
T ss_dssp HHHTTCCSEEEECSSCHHHHHHTCC-----------------------------------------SSSEEEEECSSS-C
T ss_pred HHHcCCCceEEcCchHHHHHHcCCC-----------------------------------------ccCeEEEECCCC-c
Confidence 99888665 7776666665543 134689999998 8
Q ss_pred EEEEEeCCCCCCCCCHHHHHHHh
Q 025756 224 ISYIHRDKEAGDDPDIQDILKAC 246 (248)
Q Consensus 224 I~~~h~~~~~~Dh~~i~eIL~al 246 (248)
|++.+.+. .+.+++++.+
T Consensus 119 i~~~~~g~-----~~~~~l~~~l 136 (153)
T 2l5o_A 119 ILKTYVGE-----PDFGKLYQEI 136 (153)
T ss_dssp CCEEEESS-----CCHHHHHHHH
T ss_pred EEEEEcCC-----CCHHHHHHHH
Confidence 98888763 4566666554
No 66
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=99.75 E-value=4e-17 Score=134.67 Aligned_cols=118 Identities=14% Similarity=0.027 Sum_probs=96.2
Q ss_pred CCCccccCcCCCcEEecCCC--CeEeCCCccCCCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEe-CCCHH
Q 025756 66 SVSEDTKNLLDTVKVYDVNG--NAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIG-PGSVE 142 (248)
Q Consensus 66 ~~~~~~g~~ap~f~L~d~~G--~~v~l~~l~~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is-~~~~~ 142 (248)
.+...+|+.+|+|++.|.+| +.+++.++. + +.+|++|+..||+.|+.++..|.+.+++ |+.+|+|+ .++.+
T Consensus 27 ~~~~~~G~~~P~f~l~~~~g~~~~~~l~~~~-g-k~vll~F~a~~C~~C~~~~~~l~~l~~~----~v~vv~vs~~d~~~ 100 (176)
T 3kh7_A 27 LPSALIGKPFPAFDLPSVQDPARRLTEADLK-G-KPALVNVWGTWCPSCRVEHPELTRLAEQ----GVVIYGINYKDDNA 100 (176)
T ss_dssp STTTTTTSBCCCCEEEBSSCTTSEEEGGGGC-S-SCEEEEEECTTCHHHHHHHHHHHHHHHT----TCEEEEEEESCCHH
T ss_pred ccccccCCcCCCcEecccCCCCceecHHHhC-C-CEEEEEEECCcCHHHHHHHHHHHHHHHC----CCEEEEEeCCCCHH
Confidence 34578999999999999999 899999974 3 4556666699999999999999987765 89999999 57778
Q ss_pred HHHHHHhhcCCCC-----CCChHHHHHcCCccccccccCchhhHHHHHHHHhhhhhhccccccccccCCCceeeceEEEE
Q 025756 143 QARTFSEQTKFKG-----DPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVA 217 (248)
Q Consensus 143 ~~~~f~~~~~fp~-----Dp~~~~y~alGl~~~~~~~~~P~a~~~~~k~~~~g~~~~~~~~~~g~~~~~~~~qlgG~fVv 217 (248)
.+++|.+++++++ |++..+.+.||+. ..|.+|||
T Consensus 101 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~-----------------------------------------~~P~~~li 139 (176)
T 3kh7_A 101 AAIKWLNELHNPYLLSISDADGTLGLDLGVY-----------------------------------------GAPETYLI 139 (176)
T ss_dssp HHHHHHHHTTCCCSEEEEETTCHHHHHHTCC-----------------------------------------SSCEEEEE
T ss_pred HHHHHHHHcCCCCceEEECCcchHHHHcCCC-----------------------------------------CCCeEEEE
Confidence 9999999887554 7776666666543 13579999
Q ss_pred eCCCCeEEEEEeCC
Q 025756 218 GPGKSNISYIHRDK 231 (248)
Q Consensus 218 d~gg~~I~~~h~~~ 231 (248)
|++| +|++.+.+.
T Consensus 140 d~~G-~i~~~~~g~ 152 (176)
T 3kh7_A 140 DKQG-IIRHKIVGV 152 (176)
T ss_dssp CTTC-BEEEEEESC
T ss_pred CCCC-eEEEEEcCC
Confidence 9998 999999874
No 67
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=99.75 E-value=6.6e-18 Score=139.80 Aligned_cols=84 Identities=8% Similarity=0.122 Sum_probs=71.2
Q ss_pred CCccccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCC-------
Q 025756 67 VSEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG------- 139 (248)
Q Consensus 67 ~~~~~g~~ap~f~L~d~~G~~v~l~~l~~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~------- 139 (248)
...++|+++|+|++.|.+|+.++++++ +++++|++|+..|||+|+.++..|.+.++++++.|++||+|+.+
T Consensus 21 ~~~~~g~~~p~f~l~~~~G~~~~l~~~--~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~v~vv~vs~d~~~~~e~ 98 (181)
T 2p31_A 21 QSMQQEQDFYDFKAVNIRGKLVSLEKY--RGSVSLVVNVASECGFTDQHYRALQQLQRDLGPHHFNVLAFPCNQFGQQEP 98 (181)
T ss_dssp ------CCGGGCEEEBTTSCEEEGGGG--TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCC
T ss_pred CcCCcCCccCceEeecCCCCEecHHHc--CCCEEEEEEeccCCCCcHHHHHHHHHHHHHhhcCCEEEEEEECcCCCCCCC
Confidence 467899999999999999999999997 34678888899999999999999999999999999999999975
Q ss_pred -CHHHHHHHHhh-cC
Q 025756 140 -SVEQARTFSEQ-TK 152 (248)
Q Consensus 140 -~~~~~~~f~~~-~~ 152 (248)
+.+.+++|+++ ++
T Consensus 99 ~~~~~~~~~~~~~~~ 113 (181)
T 2p31_A 99 DSNKEIESFARRTYS 113 (181)
T ss_dssp SCHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHhhcC
Confidence 57789999987 66
No 68
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=99.74 E-value=5.7e-17 Score=126.61 Aligned_cols=130 Identities=14% Similarity=0.179 Sum_probs=101.7
Q ss_pred CCccccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCC----CHH
Q 025756 67 VSEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG----SVE 142 (248)
Q Consensus 67 ~~~~~g~~ap~f~L~d~~G~~v~l~~l~~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~----~~~ 142 (248)
...++|+.+|+|++.|.+|+.+++++ +++++||.| +..||+.|+.++..|.+.++++...++.+|.|+.+ +.+
T Consensus 7 ~~~~~g~~~p~~~l~~~~g~~~~l~~--~gk~~ll~f-~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~ 83 (145)
T 3erw_A 7 AEEKQPAVPAVFLMKTIEGEDISIPN--KGQKTILHF-WTSWCPPCKKELPQFQSFYDAHPSDSVKLVTVNLVNSEQNQQ 83 (145)
T ss_dssp -----CCSCCEEEEECTTSCEEEESC--TTSEEEEEE-ECSSCHHHHHHHHHHHHHHHHCCCSSEEEEEEECGGGSSCHH
T ss_pred ccccCCCcCCCceeecCCCCEEeHHH--CCCEEEEEE-ECCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEccCCcCCHH
Confidence 34688999999999999999999999 455555555 59999999999999999999998889999999985 678
Q ss_pred HHHHHHhhcCCCC----CCChHHHHHcCCccccccccCchhhHHHHHHHHhhhhhhccccccccccCCCceeeceEEEEe
Q 025756 143 QARTFSEQTKFKG----DPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAG 218 (248)
Q Consensus 143 ~~~~f~~~~~fp~----Dp~~~~y~alGl~~~~~~~~~P~a~~~~~k~~~~g~~~~~~~~~~g~~~~~~~~qlgG~fVvd 218 (248)
.+++|.+++++++ |++..+.+.||+. ..|..||+|
T Consensus 84 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~-----------------------------------------~~P~~~lid 122 (145)
T 3erw_A 84 VVEDFIKANKLTFPIVLDSKGELMKEYHII-----------------------------------------TIPTSFLLN 122 (145)
T ss_dssp HHHHHHHHTTCCSCEEECSSSHHHHHTTCC-----------------------------------------EESEEEEEC
T ss_pred HHHHHHHHcCCceeEEEcCchhHHHhcCcC-----------------------------------------ccCeEEEEc
Confidence 8999999887555 7777777666653 245789999
Q ss_pred CCCCeEEEEEeCCCCCCCCCHHHHHHHh
Q 025756 219 PGKSNISYIHRDKEAGDDPDIQDILKAC 246 (248)
Q Consensus 219 ~gg~~I~~~h~~~~~~Dh~~i~eIL~al 246 (248)
++| +|++.+.+. .+.+++.+.+
T Consensus 123 ~~G-~i~~~~~g~-----~~~~~l~~~l 144 (145)
T 3erw_A 123 EKG-EIEKTKIGP-----MTAEQLKEWT 144 (145)
T ss_dssp TTC-CEEEEEESC-----CCHHHHHHHH
T ss_pred CCC-cEEEEEcCC-----cCHHHHHHhh
Confidence 998 999988763 3456666554
No 69
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=99.74 E-value=1.5e-17 Score=137.27 Aligned_cols=85 Identities=12% Similarity=0.153 Sum_probs=76.2
Q ss_pred CccccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeC--------C
Q 025756 68 SEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGP--------G 139 (248)
Q Consensus 68 ~~~~g~~ap~f~L~d~~G~~v~l~~l~~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~--------~ 139 (248)
....|+.+|+|+|.|.+|+.++++++ +++++|++|+..|||+|+.++..|++.++++++.|+.||+|+. +
T Consensus 11 ~~~~~~~~p~f~l~d~~G~~v~l~~~--~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~~~~~~~d 88 (180)
T 3kij_A 11 LKPKINSFYAFEVKDAKGRTVSLEKY--KGKVSLVVNVASDCQLTDRNYLGLKELHKEFGPSHFSVLAFPCNQFGESEPR 88 (180)
T ss_dssp CCCCCCCGGGCEEEBTTSCEEEGGGG--TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHTTTSEEEEEEECCCSTTCCCS
T ss_pred hcCCcCcccceEEecCCCCEecHHHc--CCCEEEEEEEecCCCCcHHHHHHHHHHHHHhccCCeEEEEEECCccccCCCC
Confidence 35679999999999999999999997 3468899999999999999999999999999999999999995 4
Q ss_pred CHHHHHHHHhh-cCCC
Q 025756 140 SVEQARTFSEQ-TKFK 154 (248)
Q Consensus 140 ~~~~~~~f~~~-~~fp 154 (248)
+.+.+++|+++ ++++
T Consensus 89 ~~~~~~~~~~~~~~~~ 104 (180)
T 3kij_A 89 PSKEVESFARKNYGVT 104 (180)
T ss_dssp CHHHHHHHHHHHHCCC
T ss_pred CHHHHHHHHHHhcCCC
Confidence 77899999998 7643
No 70
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=99.74 E-value=5.6e-17 Score=133.98 Aligned_cols=118 Identities=15% Similarity=0.144 Sum_probs=98.0
Q ss_pred CCccccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeC--------
Q 025756 67 VSEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGP-------- 138 (248)
Q Consensus 67 ~~~~~g~~ap~f~L~d~~G~~v~l~~l~~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~-------- 138 (248)
...++|+.+|+|++.|.+|+.++++++. ++++|++|+..||+.|+.++..|.+.++++.+. +.+|+|+.
T Consensus 5 ~~~~~g~~~p~f~l~~~~G~~~~l~~~~--gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~-~~~v~v~~d~~~~~~~ 81 (188)
T 2cvb_A 5 PELPLESPLIDAELPDPRGGRYRLSQFH--EPLLAVVFMCNHCPYVKGSIGELVALAERYRGK-VAFVGINANDYEKYPE 81 (188)
T ss_dssp CCCCTTCBCCCCEEECTTSCEEEGGGCC--SSEEEEEEECSSCHHHHTTHHHHHHHHHHTTTT-EEEEEEECCCTTTCGG
T ss_pred CcCCCCCCCCCceeecCCCCEEeHHHhC--CCEEEEEEECCCCccHHHHHHHHHHHHHHhhcC-eEEEEEEcCccccccc
Confidence 3568899999999999999999999973 356666677999999999999999999999887 99999998
Q ss_pred CCHHHHHHHHhhcCCCC----CCChHHHHHcCCccccccccCchhhHHHHHHHHhhhhhhccccccccccCCCceeeceE
Q 025756 139 GSVEQARTFSEQTKFKG----DPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGI 214 (248)
Q Consensus 139 ~~~~~~~~f~~~~~fp~----Dp~~~~y~alGl~~~~~~~~~P~a~~~~~k~~~~g~~~~~~~~~~g~~~~~~~~qlgG~ 214 (248)
++.+.+++|++++++++ |++.++.+.||+. ..|..
T Consensus 82 d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~-----------------------------------------~~P~~ 120 (188)
T 2cvb_A 82 DAPEKMAAFAEEHGIFFPYLLDETQEVAKAYRAL-----------------------------------------RTPEV 120 (188)
T ss_dssp GSHHHHHHHHHHHTCCSCEEECSSSHHHHHTTCC-----------------------------------------EESEE
T ss_pred cCHHHHHHHHHHhCCCceEEECCcchHHHHcCCC-----------------------------------------CCCeE
Confidence 67788999999877444 8877777776643 13468
Q ss_pred EEEeCCCCeEEEEEe
Q 025756 215 IVAGPGKSNISYIHR 229 (248)
Q Consensus 215 fVvd~gg~~I~~~h~ 229 (248)
||||++| +|++...
T Consensus 121 ~lid~~G-~i~~~g~ 134 (188)
T 2cvb_A 121 FLFDERR-LLRYHGR 134 (188)
T ss_dssp EEECTTC-BEEEEEC
T ss_pred EEECCCC-cEEEEEe
Confidence 9999998 8998833
No 71
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=99.74 E-value=3e-17 Score=136.27 Aligned_cols=86 Identities=10% Similarity=0.083 Sum_probs=76.1
Q ss_pred CCccccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCC-------
Q 025756 67 VSEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG------- 139 (248)
Q Consensus 67 ~~~~~g~~ap~f~L~d~~G~~v~l~~l~~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~------- 139 (248)
...++|+.+|+|++.|.+|+.++++++ +++++|++|+..|||+|+.++..|++.++++++.|++||+|+.+
T Consensus 21 ~~~~~g~~~p~f~l~~~~G~~v~l~~~--~Gk~vlv~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~is~d~~~~~~~ 98 (185)
T 2gs3_A 21 QSMRCARSMHEFSAKDIDGHMVNLDKY--RGFVCIVTNVASQGGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGKQEP 98 (185)
T ss_dssp GGGGGCCCGGGCEEEBTTSCEEEGGGG--TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCTTTTCCC
T ss_pred hhccCCCCcCCceeEcCCCCEeeHHHc--CCCEEEEEEecCCCCchHHHHHHHHHHHHHhhcCCeEEEEEECcccCCCCC
Confidence 456889999999999999999999997 34678888899999999999999999999999999999999865
Q ss_pred -CHHHHHHHHhhcCCC
Q 025756 140 -SVEQARTFSEQTKFK 154 (248)
Q Consensus 140 -~~~~~~~f~~~~~fp 154 (248)
+.+.+++|+++++++
T Consensus 99 ~~~~~~~~~~~~~~~~ 114 (185)
T 2gs3_A 99 GSNEEIKEFAAGYNVK 114 (185)
T ss_dssp SCHHHHHHHHHHTTCC
T ss_pred CCHHHHHHHHHHcCCC
Confidence 467889999887644
No 72
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=99.73 E-value=2.1e-17 Score=132.11 Aligned_cols=118 Identities=19% Similarity=0.185 Sum_probs=97.9
Q ss_pred cccCcCCCcEEec-CCCCeEeCCCccCCCeEEEEEEcCCCChhhHHH-HHHHHhcHHHHHHCCCEEEEEeC-------CC
Q 025756 70 DTKNLLDTVKVYD-VNGNAIPISDLWKDRKAVVAFARHFGCVLCRKR-ADYLAAKKDVMDASGVALVLIGP-------GS 140 (248)
Q Consensus 70 ~~g~~ap~f~L~d-~~G~~v~l~~l~~~~~vvlvF~R~~~Cp~C~~~-l~~L~~~~~~l~~~Gv~vV~Is~-------~~ 140 (248)
-.|.++|+|++.| .+|+.++++++. ++++|++|+..||+.|+.+ +..|.+.++++.+.|+.+|+|+. ++
T Consensus 4 ~~g~~~p~~~~~~~~~g~~~~l~~~~--gk~vlv~F~a~~C~~C~~e~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~ 81 (160)
T 3lor_A 4 LDNAPLLELDVQEWVNHEGLSNEDLR--GKVVVVEVFQMLCPGCVNHGVPQAQKIHRMIDESQVQVIGLHSVFEHHDVMT 81 (160)
T ss_dssp CTTCCBCCCCEEEESSSCCCCHHHHT--TSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSC
T ss_pred cCCCcCCCcccccccCCCccCHHHhC--CCEEEEEEEcCCCcchhhhhhHHHHHHHHHhCcCCcEEEEEeccccccccCC
Confidence 3688999999999 899999999973 4677778888899999996 99999999999989999999997 68
Q ss_pred HHHHHHHHhhcCCCC----CCChH------HHHHcCCccccccccCchhhHHHHHHHHhhhhhhccccccccccCCCcee
Q 025756 141 VEQARTFSEQTKFKG----DPNHS------SYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQ 210 (248)
Q Consensus 141 ~~~~~~f~~~~~fp~----Dp~~~------~y~alGl~~~~~~~~~P~a~~~~~k~~~~g~~~~~~~~~~g~~~~~~~~q 210 (248)
.+.+++|.+++++++ |++.. +++.||+. .
T Consensus 82 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~v~-----------------------------------------~ 120 (160)
T 3lor_A 82 PEALKVFIDEFGIKFPVAVDMPREGQRIPSTMKKYRLE-----------------------------------------G 120 (160)
T ss_dssp HHHHHHHHHHTTCCSCEEEECCCTTCSSCHHHHHTTCC-----------------------------------------S
T ss_pred HHHHHHHHHHcCCCCcEEECCccccchhhhHHHhcccC-----------------------------------------c
Confidence 899999999887544 66655 55555432 1
Q ss_pred eceEEEEeCCCCeEEEEEeCC
Q 025756 211 QGGIIVAGPGKSNISYIHRDK 231 (248)
Q Consensus 211 lgG~fVvd~gg~~I~~~h~~~ 231 (248)
.|..||||++| +|++.|.+.
T Consensus 121 ~P~~~lid~~G-~i~~~~~g~ 140 (160)
T 3lor_A 121 TPSIILADRKG-RIRQVQFGQ 140 (160)
T ss_dssp SSEEEEECTTS-BEEEEEESC
T ss_pred cceEEEECCCC-cEEEEecCc
Confidence 45789999998 999998874
No 73
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=99.73 E-value=5.2e-17 Score=130.95 Aligned_cols=85 Identities=14% Similarity=0.207 Sum_probs=71.9
Q ss_pred CccccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCC--------
Q 025756 68 SEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG-------- 139 (248)
Q Consensus 68 ~~~~g~~ap~f~L~d~~G~~v~l~~l~~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~-------- 139 (248)
..++|+.+|+|++.|.+|+.++++++ +++++|++|+..||+.|+.++..|++.++++++.|++||+|+.+
T Consensus 4 ~~~~g~~~p~f~l~~~~G~~~~l~~~--~gk~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~ 81 (169)
T 2v1m_A 4 SHKSWNSIYEFTVKDINGVDVSLEKY--RGHVCLIVNVACKCGATDKNYRQLQEMHTRLVGKGLRILAFPCNQFGGQEPW 81 (169)
T ss_dssp ---CCCSGGGCEEEBTTSCEEEGGGG--TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCS
T ss_pred cccCCcccccceeecCCCCCccHHHc--CCCEEEEEEeeccCCchHHHHHHHHHHHHHhhcCCeEEEEEECCccCCCCCC
Confidence 35789999999999999999999997 34567777788999999999999999999999999999999975
Q ss_pred CHHHHHHH-HhhcCCC
Q 025756 140 SVEQARTF-SEQTKFK 154 (248)
Q Consensus 140 ~~~~~~~f-~~~~~fp 154 (248)
+.+.+++| .++++++
T Consensus 82 ~~~~~~~~~~~~~~~~ 97 (169)
T 2v1m_A 82 AEAEIKKFVTEKYGVQ 97 (169)
T ss_dssp CHHHHHHHHHHHHCCC
T ss_pred CHHHHHHHHHHhcCCC
Confidence 46788999 5777643
No 74
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=99.73 E-value=1.3e-16 Score=127.90 Aligned_cols=125 Identities=14% Similarity=0.107 Sum_probs=97.5
Q ss_pred CccccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCC-HHHHHH
Q 025756 68 SEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS-VEQART 146 (248)
Q Consensus 68 ~~~~g~~ap~f~L~d~~G~~v~l~~l~~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~-~~~~~~ 146 (248)
+.++|+++|+|++.|.+|+.+++.++ ++ +.+|++|+..||+.|+.++..|.+.++++.+.|+.+|+|+.++ .+.+++
T Consensus 7 ~~~~g~~~p~~~l~~~~g~~~~l~~~-~g-k~vlv~f~~~~C~~C~~~~~~l~~l~~~~~~~~v~~v~v~~d~~~~~~~~ 84 (165)
T 3or5_A 7 ADARPTPAPSFSGVTVDGKPFSSASL-KG-KAYIVNFFATWCPPCRSEIPDMVQVQKTWASRGFTFVGIAVNEQLPNVKN 84 (165)
T ss_dssp CCCCCCBCCCCEEECTTSCEEEGGGG-TT-CEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTTEEEEEEECSCCHHHHHH
T ss_pred hhcCCCCCCCceeeCCCCCEechhHc-CC-CEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHH
Confidence 35889999999999999999999997 33 4556666699999999999999999999999999999999886 678899
Q ss_pred HHhhcCCCC----CCChHHHHHcCCccccccccCchhhHHHHHHHHhhhhhhccccccccccCCCceeeceEEEEeCCCC
Q 025756 147 FSEQTKFKG----DPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGPGKS 222 (248)
Q Consensus 147 f~~~~~fp~----Dp~~~~y~alGl~~~~~~~~~P~a~~~~~k~~~~g~~~~~~~~~~g~~~~~~~~qlgG~fVvd~gg~ 222 (248)
|.+++++++ |.+ ++.+.|+.... .+....|..||+|++|
T Consensus 85 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~-----------------------------------~~i~~~P~~~lid~~G- 127 (165)
T 3or5_A 85 YMKTQGIIYPVMMATP-ELIRAFNGYID-----------------------------------GGITGIPTSFVIDASG- 127 (165)
T ss_dssp HHHHHTCCSCEEECCH-HHHHHHHTTST-----------------------------------TCSCSSSEEEEECTTS-
T ss_pred HHHHcCCCCceEecCH-HHHHHHhhhhc-----------------------------------cCCCCCCeEEEECCCC-
Confidence 998877544 433 44444332110 0113467899999998
Q ss_pred eEEEEEeCC
Q 025756 223 NISYIHRDK 231 (248)
Q Consensus 223 ~I~~~h~~~ 231 (248)
+|++.+.+.
T Consensus 128 ~i~~~~~g~ 136 (165)
T 3or5_A 128 NVSGVIVGP 136 (165)
T ss_dssp BEEEEECSC
T ss_pred cEEEEEcCC
Confidence 999888764
No 75
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=99.72 E-value=6.4e-17 Score=126.98 Aligned_cols=118 Identities=10% Similarity=0.006 Sum_probs=95.4
Q ss_pred CccccCcCCCcEEecCCCCeEeCC--CccCCCeEEEEEEcCCCChhhHHHHHHHHhcHHHH-HHCCCEEEEEeCCCH-HH
Q 025756 68 SEDTKNLLDTVKVYDVNGNAIPIS--DLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVM-DASGVALVLIGPGSV-EQ 143 (248)
Q Consensus 68 ~~~~g~~ap~f~L~d~~G~~v~l~--~l~~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l-~~~Gv~vV~Is~~~~-~~ 143 (248)
..++|+++|+|++.|.+|+.++++ ++ + ++.+|++|+..||+.|+.++..|.+.++++ ...|+.+|+|+.+.. +.
T Consensus 4 ~~~~g~~~p~~~l~~~~g~~~~l~~~~~-~-gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~ 81 (148)
T 3fkf_A 4 KVTVGKSAPYFSLPNEKGEKLSRSAERF-R-NRYLLLNFWASWCDPQPEANAELKRLNKEYKKNKNFAMLGISLDIDREA 81 (148)
T ss_dssp -CCTTSBCCCCCEEBTTSCEECTTSTTT-T-TSEEEEEEECGGGCCCHHHHHHHHHHHHHTTTCTTEEEEEEECCSCHHH
T ss_pred cccCCCcCCCeEeeCCCCCEEecccccc-C-CcEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCCCeEEEEEECCCCHHH
Confidence 468999999999999999999999 86 3 356666667999999999999999999999 888999999998854 58
Q ss_pred HHHHHhhcCCCC----CC---ChHHHHHcCCccccccccCchhhHHHHHHHHhhhhhhccccccccccCCCceeeceEEE
Q 025756 144 ARTFSEQTKFKG----DP---NHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIV 216 (248)
Q Consensus 144 ~~~f~~~~~fp~----Dp---~~~~y~alGl~~~~~~~~~P~a~~~~~k~~~~g~~~~~~~~~~g~~~~~~~~qlgG~fV 216 (248)
+++|.+++++++ |+ +..+.+.||+. ..|..||
T Consensus 82 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~-----------------------------------------~~P~~~l 120 (148)
T 3fkf_A 82 WETAIKKDTLSWDQVCDFTGLSSETAKQYAIL-----------------------------------------TLPTNIL 120 (148)
T ss_dssp HHHHHHHTTCCSEEECCSCGGGCHHHHHTTCC-----------------------------------------SSSEEEE
T ss_pred HHHHHHHcCCCceEEEccCCcchHHHHhcCCC-----------------------------------------CcCEEEE
Confidence 889998887554 55 34444444432 2457999
Q ss_pred EeCCCCeEEEEEe
Q 025756 217 AGPGKSNISYIHR 229 (248)
Q Consensus 217 vd~gg~~I~~~h~ 229 (248)
+|++| +|.+.+.
T Consensus 121 id~~G-~i~~~~~ 132 (148)
T 3fkf_A 121 LSPTG-KILARDI 132 (148)
T ss_dssp ECTTS-BEEEESC
T ss_pred ECCCC-eEEEecC
Confidence 99998 9998876
No 76
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=99.71 E-value=1.8e-16 Score=127.20 Aligned_cols=136 Identities=13% Similarity=0.107 Sum_probs=101.6
Q ss_pred cCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChh-hHHHHHHHHhcHHHHHH----CCCEEEEEeCCC----HHHH
Q 025756 74 LLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVL-CRKRADYLAAKKDVMDA----SGVALVLIGPGS----VEQA 144 (248)
Q Consensus 74 ~ap~f~L~d~~G~~v~l~~l~~~~~vvlvF~R~~~Cp~-C~~~l~~L~~~~~~l~~----~Gv~vV~Is~~~----~~~~ 144 (248)
.+|+|++.|.+|+.++++++. ++++|++|+..||+. |+.++..|++.++++++ .++++|+|+.+. ++.+
T Consensus 2 ~ap~f~l~~~~G~~~~l~~~~--gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~~~vv~vs~d~~~d~~~~~ 79 (164)
T 2ggt_A 2 LGGPFSLTTHTGERKTDKDYL--GQWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFISIDPERDTKEAI 79 (164)
T ss_dssp CCCCCEEEETTSCEEEGGGGT--TCEEEEEEECTTCSSHHHHHHHHHHHHHHHHHHSSSSCCEEEEEEESCTTTCCHHHH
T ss_pred CCCCeEEEeCCCCEEeHHHcC--CCEEEEEEEeCCCCchhHHHHHHHHHHHHHHhhccCCCcEEEEEEEeCCCCCCHHHH
Confidence 579999999999999999973 457777888999996 99999999999999987 499999999875 6789
Q ss_pred HHHHhhcCCCC-------CCChHHHHHcCCccccccccCchhhHHHHHHHHhhhhhhccccccccccCCCc---eeeceE
Q 025756 145 RTFSEQTKFKG-------DPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGG---WQQGGI 214 (248)
Q Consensus 145 ~~f~~~~~fp~-------Dp~~~~y~alGl~~~~~~~~~P~a~~~~~k~~~~g~~~~~~~~~~g~~~~~~~---~qlgG~ 214 (248)
++|+++++.++ |+..++.++||+..... +. + .++. ...+.+
T Consensus 80 ~~~~~~~~~~~~~l~~~~d~~~~~~~~~~v~~~p~----~~-----------------------~--~~~~~~~~~~~~~ 130 (164)
T 2ggt_A 80 ANYVKEFSPKLVGLTGTREEVDQVARAYRVYYSPG----PK-----------------------D--EDEDYIVDHTIIM 130 (164)
T ss_dssp HHHHHTTCSSCEEEECCHHHHHHHHHTTTCCEEEE----EE-----------------------C--TTSCEEEEECCEE
T ss_pred HHHHHHcCCCeEEEeCCHHHHHHHHHhcCeEEEec----CC-----------------------C--CCCCeeEeccceE
Confidence 99999877443 44456777777653210 00 0 0011 124579
Q ss_pred EEEeCCCCeEEEEEeCCCCCCCCCHHHHHHHh
Q 025756 215 IVAGPGKSNISYIHRDKEAGDDPDIQDILKAC 246 (248)
Q Consensus 215 fVvd~gg~~I~~~h~~~~~~Dh~~i~eIL~al 246 (248)
||||++| +|++.+.+. .+.+++++.+
T Consensus 131 ~lid~~G-~i~~~~~g~-----~~~~~l~~~l 156 (164)
T 2ggt_A 131 YLIGPDG-EFLDYFGQN-----KRKGEIAASI 156 (164)
T ss_dssp EEECTTS-CEEEEEETT-----CCHHHHHHHH
T ss_pred EEECCCC-eEEEEeCCC-----CCHHHHHHHH
Confidence 9999998 999988653 2456665554
No 77
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=99.71 E-value=1.2e-16 Score=128.93 Aligned_cols=82 Identities=13% Similarity=0.170 Sum_probs=69.8
Q ss_pred ccccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCC--------C
Q 025756 69 EDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG--------S 140 (248)
Q Consensus 69 ~~~g~~ap~f~L~d~~G~~v~l~~l~~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~--------~ 140 (248)
.++|+.+|+|++.|.+|+.++++++ + ++++|++|+..||+.|+.++..|++.++++++.|++||+|+.+ +
T Consensus 6 ~~~g~~~p~f~l~~~~g~~~~l~~~-~-gk~vll~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~~~~ 83 (170)
T 2p5q_A 6 SKNPESVHDFTVKDAKENDVDLSIF-K-GKVLLIVNVASKCGMTNSNYAEMNQLYEKYKDQGLEILAFPCNQFGEEEPGT 83 (170)
T ss_dssp ----CCGGGCEEEBTTSCEEEGGGG-T-TSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCTTTTCCCSC
T ss_pred CCCCccccceEEEcCCCCEecHHHh-C-CCEEEEEEEeccCCccHHHHHHHHHHHHHhccCCEEEEEEECCCCCCCCCCC
Confidence 4789999999999999999999997 3 4567777788999999999999999999999999999999974 6
Q ss_pred HHHHHHHHh-hcC
Q 025756 141 VEQARTFSE-QTK 152 (248)
Q Consensus 141 ~~~~~~f~~-~~~ 152 (248)
.+.+++|++ +++
T Consensus 84 ~~~~~~~~~~~~~ 96 (170)
T 2p5q_A 84 NDQITDFVCTRFK 96 (170)
T ss_dssp HHHHHHHHHHHTC
T ss_pred HHHHHHHHHHhcC
Confidence 788999998 555
No 78
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=99.71 E-value=6.4e-17 Score=128.24 Aligned_cols=132 Identities=15% Similarity=0.189 Sum_probs=103.4
Q ss_pred ccccCcCC-CcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCCH-HHHHH
Q 025756 69 EDTKNLLD-TVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV-EQART 146 (248)
Q Consensus 69 ~~~g~~ap-~f~L~d~~G~~v~l~~l~~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~~-~~~~~ 146 (248)
.++|+.+| +|++.|.+|+.++++++ ++ +.+|++|+..||+.|+.++..|.+.++++...++.+|+|+.+.. +.+++
T Consensus 3 l~~G~~~p~~f~l~~~~g~~~~l~~~-~g-k~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~ 80 (152)
T 2lja_A 3 LRSGNPSAASFSYPDINGKTVSLADL-KG-KYIYIDVWATWCGPCRGELPALKELEEKYAGKDIHFVSLSCDKNKKAWEN 80 (152)
T ss_dssp TTTTCCCSSSCEEEETTTEEEESTTT-TT-SEEEEEECCSSCCGGGGTHHHHHHHHHHSTTSSEEEEEEECCSCHHHHHH
T ss_pred cccCCCCCcccEeecCCCCEeeHHHc-CC-CEEEEEEECCcCHhHHHHhHHHHHHHHHhccCCeEEEEEEccCcHHHHHH
Confidence 57899999 99999999999999997 33 45666777999999999999999999999888999999998865 57889
Q ss_pred HHhhcCCCC-----CCChHHHHHcCCccccccccCchhhHHHHHHHHhhhhhhccccccccccCCCceeeceEEEEeCCC
Q 025756 147 FSEQTKFKG-----DPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGPGK 221 (248)
Q Consensus 147 f~~~~~fp~-----Dp~~~~y~alGl~~~~~~~~~P~a~~~~~k~~~~g~~~~~~~~~~g~~~~~~~~qlgG~fVvd~gg 221 (248)
|.+++++++ |++.++.+.||+. ..|..||+|++|
T Consensus 81 ~~~~~~~~~~~~~~d~~~~~~~~~~v~-----------------------------------------~~P~~~lid~~G 119 (152)
T 2lja_A 81 MVTKDQLKGIQLHMGTDRTFMDAYLIN-----------------------------------------GIPRFILLDRDG 119 (152)
T ss_dssp HHHHHTCCSEEEECSSCTHHHHHTTCC-----------------------------------------SSCCEEEECTTS
T ss_pred HHHhcCCCCceeecCcchhHHHHcCcC-----------------------------------------CCCEEEEECCCC
Confidence 998877664 6666666665543 134689999998
Q ss_pred CeEEEEEeCCCCCCCCCHHHHHHHh
Q 025756 222 SNISYIHRDKEAGDDPDIQDILKAC 246 (248)
Q Consensus 222 ~~I~~~h~~~~~~Dh~~i~eIL~al 246 (248)
+|++.+.+ ..+..+++++|+.+
T Consensus 120 -~i~~~~~g--~~~~~~l~~~l~~~ 141 (152)
T 2lja_A 120 -KIISANMT--RPSDPKTAEKFNEL 141 (152)
T ss_dssp -CEEESSCC--CTTCHHHHHHHHHH
T ss_pred -eEEEccCC--CCCHHHHHHHHHHH
Confidence 89887644 33444555665544
No 79
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=99.70 E-value=1.7e-16 Score=126.26 Aligned_cols=126 Identities=13% Similarity=0.133 Sum_probs=98.3
Q ss_pred CccccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeC---CCHHHH
Q 025756 68 SEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGP---GSVEQA 144 (248)
Q Consensus 68 ~~~~g~~ap~f~L~d~~G~~v~l~~l~~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~---~~~~~~ 144 (248)
..++|+.+|+|++.|.+|+.++++++. ++ +|++|+..||+.|+.++..|.+.++++ ++.+|+|+. ++.+.+
T Consensus 4 ~l~~g~~~p~f~l~~~~g~~~~l~~~~--k~-vll~f~~~~C~~C~~~~~~l~~l~~~~---~v~~v~v~~d~~~~~~~~ 77 (154)
T 3ia1_A 4 AVKPGEPLPDFLLLDPKGQPVTPATVS--KP-AVIVFWASWCTVCKAEFPGLHRVAEET---GVPFYVISREPRDTREVV 77 (154)
T ss_dssp CCCSBEECCCCCEECTTSCEECTTTSC--SS-EEEEEECTTCHHHHHHHHHHHHHHHHH---CCCEEEEECCTTCCHHHH
T ss_pred cCCCCCcCCceEEECCCCCEechHHcC--Ce-EEEEEEcccChhHHHHHHHHHHHHHHc---CCeEEEEeCCCcccHHHH
Confidence 468899999999999999999999963 45 555556999999999999999999998 899999999 788899
Q ss_pred HHHHhhcCCC--C--C---CChHHHHHcCCccccccccCchhhHHHHHHHHhhhhhhccccccccccCCCceeeceEEEE
Q 025756 145 RTFSEQTKFK--G--D---PNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVA 217 (248)
Q Consensus 145 ~~f~~~~~fp--~--D---p~~~~y~alGl~~~~~~~~~P~a~~~~~k~~~~g~~~~~~~~~~g~~~~~~~~qlgG~fVv 217 (248)
++|.++++++ + | .+..+++.||+. ..|..|||
T Consensus 78 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~-----------------------------------------~~P~~~li 116 (154)
T 3ia1_A 78 LEYMKTYPRFIPLLASDRDRPHEVAARFKVL-----------------------------------------GQPWTFVV 116 (154)
T ss_dssp HHHHTTCTTEEECBCCSSCCHHHHHTTSSBC-----------------------------------------SSCEEEEE
T ss_pred HHHHHHcCCCcccccccccchHHHHHHhCCC-----------------------------------------cccEEEEE
Confidence 9999988743 3 4 333333333322 24679999
Q ss_pred eCCCCeEEEEEeCCCCCCCCCHHHHHHHh
Q 025756 218 GPGKSNISYIHRDKEAGDDPDIQDILKAC 246 (248)
Q Consensus 218 d~gg~~I~~~h~~~~~~Dh~~i~eIL~al 246 (248)
|++| +|++.+.+. .+.+++.+.+
T Consensus 117 d~~G-~i~~~~~g~-----~~~~~l~~~l 139 (154)
T 3ia1_A 117 DREG-KVVALFAGR-----AGREALLDAL 139 (154)
T ss_dssp CTTS-EEEEEEESB-----CCHHHHHHHH
T ss_pred CCCC-CEEEEEcCC-----CCHHHHHHHH
Confidence 9998 999998763 3455665554
No 80
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=99.70 E-value=6.9e-17 Score=134.62 Aligned_cols=84 Identities=10% Similarity=0.133 Sum_probs=72.5
Q ss_pred CccccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCC--------
Q 025756 68 SEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG-------- 139 (248)
Q Consensus 68 ~~~~g~~ap~f~L~d~~G~~v~l~~l~~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~-------- 139 (248)
..+.++.+|+|++.|.+|+.++++++ + ++++|++|+..||+.|+.++..|++.++++++.|++||+|+.+
T Consensus 21 ~~~~~~~~p~f~l~~~~G~~~~l~~~-~-Gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~ 98 (190)
T 2vup_A 21 HMSAASSIFDFEVLDADHKPYNLVQH-K-GSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFPCNQFGGQEPG 98 (190)
T ss_dssp ---CCCSGGGSCCBBTTSSBCCGGGG-T-TSCEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTCEEEEEECCCSTTCCCS
T ss_pred cCCCCCcccCeEEEcCCCCEEEHHHc-C-CCEEEEEEecCCCCccHHHHHHHHHHHHHHhcCCeEEEEEEcCccCCCCCC
Confidence 46889999999999999999999997 3 3566777789999999999999999999999999999999987
Q ss_pred CHHHHHHHH-hhcCC
Q 025756 140 SVEQARTFS-EQTKF 153 (248)
Q Consensus 140 ~~~~~~~f~-~~~~f 153 (248)
+.+.+++|+ +++++
T Consensus 99 ~~~~~~~~~~~~~~~ 113 (190)
T 2vup_A 99 NEEEIKEFVCTKFKA 113 (190)
T ss_dssp CHHHHHHHHHHHHCC
T ss_pred CHHHHHHHHHHhcCC
Confidence 678899999 77653
No 81
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=99.70 E-value=6.5e-17 Score=130.70 Aligned_cols=146 Identities=9% Similarity=0.066 Sum_probs=111.2
Q ss_pred CccccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChh-hHHHHHHHHhcHHHHHHC---CCEEEEEeCC----
Q 025756 68 SEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVL-CRKRADYLAAKKDVMDAS---GVALVLIGPG---- 139 (248)
Q Consensus 68 ~~~~g~~ap~f~L~d~~G~~v~l~~l~~~~~vvlvF~R~~~Cp~-C~~~l~~L~~~~~~l~~~---Gv~vV~Is~~---- 139 (248)
...+|+.+|+|++.|.+| .++++++ +++++|++|+..||+. |+.++..|.+.++++++. ++++|+|+.+
T Consensus 9 ~~~~G~~~p~f~l~~~~g-~~~l~~~--~gk~vll~f~~~~C~~~C~~~~~~l~~~~~~~~~~~~~~v~vv~is~d~~~d 85 (172)
T 2k6v_A 9 TRLLNPKPVDFALEGPQG-PVRLSQF--QDKVVLLFFGFTRCPDVCPTTLLALKRAYEKLPPKAQERVQVIFVSVDPERD 85 (172)
T ss_dssp EEEEEEEECCCEEECSSS-EEEGGGS--TTSEEEEEEECTTCSSHHHHHHHHHHHHHTTSCHHHHTTEEEEEEESCTTTC
T ss_pred ccccCCCCCCeEEEcCCC-CCcHHHh--CCCEEEEEEECCCCcchhHHHHHHHHHHHHHhhhhccCCEEEEEEEECCCCC
Confidence 346789999999999999 9999997 3467888889999995 999999999999999875 7999999965
Q ss_pred CHHHHHHHHhhcCCC--C--CCC---hHHHHHcCCccccccccCchhhHHHHHHHHhhhhhhccccccccccCCCceeec
Q 025756 140 SVEQARTFSEQTKFK--G--DPN---HSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQG 212 (248)
Q Consensus 140 ~~~~~~~f~~~~~fp--~--Dp~---~~~y~alGl~~~~~~~~~P~a~~~~~k~~~~g~~~~~~~~~~g~~~~~~~~qlg 212 (248)
+++.+++|+++++.+ + |++ .++.++||+...... .. .. ..+ +....|
T Consensus 86 ~~~~~~~~~~~~~~~~~~l~d~~~~~~~~~~~~gv~~~~~~----~~-----------~~----~~~-------~i~~~P 139 (172)
T 2k6v_A 86 PPEVADRYAKAFHPSFLGLSGSPEAVREAAQTFGVFYQKSQ----YR-----------GP----GEY-------LVDHTA 139 (172)
T ss_dssp CHHHHHHHHHHHCTTEEEECCCHHHHHHHHHHHTCCEEEEE----EE-----------ET----TEE-------EEEECC
T ss_pred CHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHhcCeEEEecc----CC-----------CC----CCc-------eEecCC
Confidence 568899999988744 4 877 688888888643210 00 00 000 012467
Q ss_pred eEEEEeCCCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025756 213 GIIVAGPGKSNISYIHRDKEAGDDPDIQDILKACC 247 (248)
Q Consensus 213 G~fVvd~gg~~I~~~h~~~~~~Dh~~i~eIL~al~ 247 (248)
.+|||| +| +|++.|.+.. .++.+++++.++
T Consensus 140 ~~~lid-~G-~i~~~~~g~~---~~~~~~l~~~l~ 169 (172)
T 2k6v_A 140 TTFVVK-EG-RLVLLYSPDK---AEATDRVVADLQ 169 (172)
T ss_dssp CEEEEE-TT-EEEEEECHHH---HTCHHHHHHHHH
T ss_pred EEEEEE-CC-EEEEEECCCC---CCCHHHHHHHHH
Confidence 899999 87 9999987643 346777777664
No 82
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=99.69 E-value=1.7e-16 Score=126.52 Aligned_cols=128 Identities=13% Similarity=0.093 Sum_probs=92.5
Q ss_pred cCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCCHHHHHHHHhhcCC
Q 025756 74 LLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKF 153 (248)
Q Consensus 74 ~ap~f~L~d~~G~~v~l~~l~~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~~~~~~~f~~~~~f 153 (248)
++|+|++. .+|+.++++++ +++++|++|+..||+.|+.++..|.+.+++++..|+.+|+|+.++.+.+++|++++++
T Consensus 4 pa~~~~~~-~~G~~~~l~~~--~gk~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~ 80 (151)
T 3raz_A 4 SADELAGW-KDNTPQSLQSL--KAPVRIVNLWATWCGPCRKEMPAMSKWYKAQKKGSVDMVGIALDTSDNIGNFLKQTPV 80 (151)
T ss_dssp ---CEEET-TTCCEECGGGC--CSSEEEEEEECTTCHHHHHHHHHHHHHHHTSCTTTEEEEEEESSCHHHHHHHHHHSCC
T ss_pred Ccchhhcc-cCCCEecHHHh--CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCChHHHHHHHHHcCC
Confidence 34455544 79999999997 3457777777999999999999999999999889999999999999999999998874
Q ss_pred CC----CC---ChHHHHHcCCccccccccCchhhHHHHHHHHhhhhhhccccccccccCCCceeeceEEEEeCCCCeEEE
Q 025756 154 KG----DP---NHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGPGKSNISY 226 (248)
Q Consensus 154 p~----Dp---~~~~y~alGl~~~~~~~~~P~a~~~~~k~~~~g~~~~~~~~~~g~~~~~~~~qlgG~fVvd~gg~~I~~ 226 (248)
++ |. ...+++.||.. ...+|.+||||++| +|++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~---------------------------------------v~~~P~~~lid~~G-~i~~ 120 (151)
T 3raz_A 81 SYPIWRYTGANSRNFMKTYGNT---------------------------------------VGVLPFTVVEAPKC-GYRQ 120 (151)
T ss_dssp SSCEEEECCSCHHHHHHTTTCC---------------------------------------SCCSSEEEEEETTT-TEEE
T ss_pred CCceEecCccchHHHHHHhCCc---------------------------------------cCCCCEEEEECCCC-cEEE
Confidence 43 22 22333333310 01356899999998 9999
Q ss_pred EEeCCCCCCCCCHHHHHHHh
Q 025756 227 IHRDKEAGDDPDIQDILKAC 246 (248)
Q Consensus 227 ~h~~~~~~Dh~~i~eIL~al 246 (248)
.+.+.. +..++++.|+.+
T Consensus 121 ~~~g~~--~~~~l~~~l~~l 138 (151)
T 3raz_A 121 TITGEV--NEKSLTDAVKLA 138 (151)
T ss_dssp ECCSCC--CHHHHHHHHHHH
T ss_pred EECCCC--CHHHHHHHHHHH
Confidence 887642 233344445444
No 83
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=99.52 E-value=1.8e-18 Score=138.92 Aligned_cols=134 Identities=14% Similarity=0.210 Sum_probs=105.5
Q ss_pred CccccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChhhHHHHHHHHh-cHHHHH-HCCCEEEEEeCCCH-HHH
Q 025756 68 SEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAA-KKDVMD-ASGVALVLIGPGSV-EQA 144 (248)
Q Consensus 68 ~~~~g~~ap~f~L~d~~G~~v~l~~l~~~~~vvlvF~R~~~Cp~C~~~l~~L~~-~~~~l~-~~Gv~vV~Is~~~~-~~~ 144 (248)
..++|+.+|+|++.|.+|+.++++++ + ++.+|++|+..||+.|+.++..|.+ .+.+++ ..++.+|+|+.++. +.+
T Consensus 6 ~l~~g~~~p~f~l~~~~g~~~~l~~~-~-gk~vll~f~a~~C~~C~~~~~~l~~~l~~~~~~~~~~~vv~v~~d~~~~~~ 83 (159)
T 2ls5_A 6 IVRIGEMAPDFTITLTDGKQVTLSSL-R-GKVVMLQFTASWCGVCRKEMPFIEKDIWLKHKDNADFALIGIDRDEPLEKV 83 (159)
Confidence 46789999999999999999999997 3 3566667779999999999999998 888887 78999999998875 568
Q ss_pred HHHHhhcC--CCC--CCChHHHHHcCCccccccccCchhhHHHHHHHHhhhhhhccccccccccCCCceeeceEEEEeCC
Q 025756 145 RTFSEQTK--FKG--DPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGPG 220 (248)
Q Consensus 145 ~~f~~~~~--fp~--Dp~~~~y~alGl~~~~~~~~~P~a~~~~~k~~~~g~~~~~~~~~~g~~~~~~~~qlgG~fVvd~g 220 (248)
++|.++++ ||+ |++.+++++||+... ..|..||+|++
T Consensus 84 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~---------------------------------------~~P~~~lid~~ 124 (159)
T 2ls5_A 84 LAFAKSTGVTYPLGLDPGADIFAKYALRDA---------------------------------------GITRNVLIDRE 124 (159)
Confidence 88988776 555 888777777665310 13468999999
Q ss_pred CCeEEEEEeCCCCCCCCCHHHHHHHh
Q 025756 221 KSNISYIHRDKEAGDDPDIQDILKAC 246 (248)
Q Consensus 221 g~~I~~~h~~~~~~Dh~~i~eIL~al 246 (248)
| +|++.+.+.+ ..+++++|+.+
T Consensus 125 G-~i~~~~~g~~---~~~l~~~l~~l 146 (159)
T 2ls5_A 125 G-KIVKLTRLYN---EEEFASLVQQI 146 (159)
Confidence 8 9999887633 33566666654
No 84
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=99.69 E-value=7.1e-16 Score=124.65 Aligned_cols=134 Identities=15% Similarity=0.148 Sum_probs=101.3
Q ss_pred CCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChh-hHHHHHHHHhcHHHHHH----CCCEEEEEeCC----CHHHHHH
Q 025756 76 DTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVL-CRKRADYLAAKKDVMDA----SGVALVLIGPG----SVEQART 146 (248)
Q Consensus 76 p~f~L~d~~G~~v~l~~l~~~~~vvlvF~R~~~Cp~-C~~~l~~L~~~~~~l~~----~Gv~vV~Is~~----~~~~~~~ 146 (248)
|+|++.|.+|+.++++++. ++++|++|+..||+. |+.++..|++.++++++ .++++|+|+.+ +++.+++
T Consensus 7 p~f~l~~~~G~~~~l~~~~--gk~vll~F~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~ 84 (171)
T 2rli_A 7 GDFHLLDHRGRARCKADFR--GQWVLMYFGFTHCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFITVDPERDDVEAMAR 84 (171)
T ss_dssp SCCEEEETTSCEEETTTTT--TSEEEEEEECTTCSSSHHHHHHHHHHHHHHHHHSTTSCCEEEEEEESCSTTCCHHHHHH
T ss_pred CCeEEEeCCCCEEeHHHhC--CCEEEEEEEcCCCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEEECCCCCCHHHHHH
Confidence 8999999999999999973 467888899999997 99999999999999976 59999999987 5788999
Q ss_pred HHhhcC--CCC--CC---ChHHHHHcCCccccccccCchhhHHHHHHHHhhhhhhccccccccccCCCc---eeeceEEE
Q 025756 147 FSEQTK--FKG--DP---NHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGG---WQQGGIIV 216 (248)
Q Consensus 147 f~~~~~--fp~--Dp---~~~~y~alGl~~~~~~~~~P~a~~~~~k~~~~g~~~~~~~~~~g~~~~~~~---~qlgG~fV 216 (248)
|+++++ |++ |. ..++.++||+..... +. ..++. ...+.+||
T Consensus 85 ~~~~~~~~~~~l~~~~~~~~~~~~~~~v~~~p~----~~-------------------------~~~~~~~~~~~~~~~l 135 (171)
T 2rli_A 85 YVQDFHPRLLGLTGSTKQVAQASHSYRVYYNAG----PK-------------------------DEDQDYIVDHSIAIYL 135 (171)
T ss_dssp HHHTTCTTCCEEECCHHHHHHHHHHSCCCCEEC----CC-------------------------CSSCCCCEECCCEEEE
T ss_pred HHHHcCCCeEEEeCCHHHHHHHHHHhCeEEEec----CC-------------------------CCCCCeEEeccceEEE
Confidence 999887 444 32 246778888763311 00 00011 23568999
Q ss_pred EeCCCCeEEEEEeCCCCCCCCCHHHHHHHh
Q 025756 217 AGPGKSNISYIHRDKEAGDDPDIQDILKAC 246 (248)
Q Consensus 217 vd~gg~~I~~~h~~~~~~Dh~~i~eIL~al 246 (248)
||++| +|++.|.+. .+.+++++.+
T Consensus 136 id~~G-~i~~~~~g~-----~~~~~l~~~l 159 (171)
T 2rli_A 136 LNPDG-LFTDYYGRS-----RSAEQISDSV 159 (171)
T ss_dssp ECTTS-CEEEEEESS-----CCHHHHHHHH
T ss_pred ECCCC-eEEEEECCC-----CCHHHHHHHH
Confidence 99998 999998763 2455555544
No 85
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=99.69 E-value=2.1e-16 Score=133.16 Aligned_cols=134 Identities=11% Similarity=0.075 Sum_probs=96.5
Q ss_pred ccccCcC--CCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChh-hHHHHHHHHhcHHHHHHC---CCEEEEEeCC---
Q 025756 69 EDTKNLL--DTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVL-CRKRADYLAAKKDVMDAS---GVALVLIGPG--- 139 (248)
Q Consensus 69 ~~~g~~a--p~f~L~d~~G~~v~l~~l~~~~~vvlvF~R~~~Cp~-C~~~l~~L~~~~~~l~~~---Gv~vV~Is~~--- 139 (248)
..+|+++ |+|++.|.+|+.++++++ + ++++|++|+..||+. |+.++..|++.++++.+. +++||+|+.|
T Consensus 13 ~~~g~~~~~p~f~l~d~~G~~v~l~~~-~-Gk~vlv~F~at~C~~vC~~~~~~l~~l~~~~~~~~~~~v~vv~Is~D~~~ 90 (200)
T 2b7k_A 13 RGYGKPSLGGPFHLEDMYGNEFTEKNL-L-GKFSIIYFGFSNCPDICPDELDKLGLWLNTLSSKYGITLQPLFITCDPAR 90 (200)
T ss_dssp ---CCCCCCCCCEEEETTSCEEEGGGG-T-TSCEEEEEECTTCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEEESCTTT
T ss_pred hccCCCCcCCCEEEEcCCCCEEeHHHc-C-CCEEEEEEECCCCcchhHHHHHHHHHHHHHHHHhhCCceEEEEEECCCCC
Confidence 4667775 999999999999999997 3 456788888999996 999999999999999864 8999999988
Q ss_pred -CHHHHHHHHhhcCCCC-------CCChHHHHHcCCccccccccCchhhHHHHHHHHhhhhhhccccccccccCCCceee
Q 025756 140 -SVEQARTFSEQTKFKG-------DPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQ 211 (248)
Q Consensus 140 -~~~~~~~f~~~~~fp~-------Dp~~~~y~alGl~~~~~~~~~P~a~~~~~k~~~~g~~~~~~~~~~g~~~~~~~~ql 211 (248)
+++.+++|+++++.++ |...++.++||+.........+ + ..+. ....
T Consensus 91 d~~~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~gv~~~~p~~~~~------------~------~~~~-------~~~~ 145 (200)
T 2b7k_A 91 DSPAVLKEYLSDFHPSILGLTGTFDEVKNACKKYRVYFSTPPNVKP------------G------QDYL-------VDHS 145 (200)
T ss_dssp CCHHHHHHHHTTSCTTCEEEECCHHHHHHHHHHTTC--------------------------------C-------TTTC
T ss_pred CCHHHHHHHHHHcCCCceEEeCCHHHHHHHHHHcCcEEeeccccCC------------C------CCce-------eeec
Confidence 6788999999876433 4456788888876322100000 0 0000 0124
Q ss_pred ceEEEEeCCCCeEEEEEeC
Q 025756 212 GGIIVAGPGKSNISYIHRD 230 (248)
Q Consensus 212 gG~fVvd~gg~~I~~~h~~ 230 (248)
+.+||||++| +|++.+.+
T Consensus 146 ~~~~liD~~G-~i~~~~~g 163 (200)
T 2b7k_A 146 IFFYLMDPEG-QFVDALGR 163 (200)
T ss_dssp CCEEEECTTS-CEEEEECT
T ss_pred ceEEEECCCC-cEEEEeCC
Confidence 5799999998 99998865
No 86
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.68 E-value=1.3e-15 Score=117.75 Aligned_cols=126 Identities=13% Similarity=0.145 Sum_probs=98.8
Q ss_pred CcCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCC-HHHHHHHHhhc
Q 025756 73 NLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS-VEQARTFSEQT 151 (248)
Q Consensus 73 ~~ap~f~L~d~~G~~v~l~~l~~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~-~~~~~~f~~~~ 151 (248)
..+|+|++.|.+|+.+++.++ +++++||.| +..||+.|+.++..|.+.++++. ++.+++|+.++ .+.+++|.+++
T Consensus 2 ~~~p~~~l~~~~g~~~~l~~~-~~k~~lv~f-~~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~~~ 77 (136)
T 1lu4_A 2 DERLQFTATTLSGAPFDGASL-QGKPAVLWF-WTPWCPFCNAEAPSLSQVAAANP--AVTFVGIATRADVGAMQSFVSKY 77 (136)
T ss_dssp GGGGCCEEEBTTSCEEEGGGG-TTSCEEEEE-ECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEECSSCHHHHHHHHHHH
T ss_pred CCCCCeEeecCCCCeecHHHh-CCCEEEEEE-ECCcChhHHHHHHHHHHHHHHCC--CcEEEEEEcCCCHHHHHHHHHHc
Confidence 468999999999999999997 445555555 59999999999999999999886 99999999987 78899999988
Q ss_pred CCCC----CCChHHHHHcCCccccccccCchhhHHHHHHHHhhhhhhccccccccccCCCceeeceEEEEeCCCCeEEEE
Q 025756 152 KFKG----DPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGPGKSNISYI 227 (248)
Q Consensus 152 ~fp~----Dp~~~~y~alGl~~~~~~~~~P~a~~~~~k~~~~g~~~~~~~~~~g~~~~~~~~qlgG~fVvd~gg~~I~~~ 227 (248)
++++ |++.++.+.||+. ..|..||+|++| +|. .
T Consensus 78 ~~~~~~~~d~~~~~~~~~~i~-----------------------------------------~~P~~~lid~~G-~i~-~ 114 (136)
T 1lu4_A 78 NLNFTNLNDADGVIWARYNVP-----------------------------------------WQPAFVFYRADG-TST-F 114 (136)
T ss_dssp TCCSEEEECTTSHHHHHTTCC-----------------------------------------SSSEEEEECTTS-CEE-E
T ss_pred CCCceEEECCchhHHHhcCCC-----------------------------------------CCCEEEEECCCC-cEE-E
Confidence 7555 8777777766643 135689999998 888 6
Q ss_pred EeCCCCCCCCCHHHHHHHhh
Q 025756 228 HRDKEAGDDPDIQDILKACC 247 (248)
Q Consensus 228 h~~~~~~Dh~~i~eIL~al~ 247 (248)
+.+ .....+.+++.+.+.
T Consensus 115 ~~~--~~g~~~~~~l~~~l~ 132 (136)
T 1lu4_A 115 VNN--PTAAMSQDELSGRVA 132 (136)
T ss_dssp ECC--SSSCCCHHHHHHHHH
T ss_pred EEc--CCCccCHHHHHHHHH
Confidence 662 333455677776654
No 87
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=99.68 E-value=5.2e-17 Score=135.21 Aligned_cols=82 Identities=7% Similarity=0.122 Sum_probs=71.8
Q ss_pred CCccccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCC-------
Q 025756 67 VSEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG------- 139 (248)
Q Consensus 67 ~~~~~g~~ap~f~L~d~~G~~v~l~~l~~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~------- 139 (248)
..++.+..+|+|++.|.+|+.++++++ +++++|++|+..|||.|+.++..|++.++++++.|++||+|+.+
T Consensus 18 ~~~~~~~~~p~f~l~d~~G~~~~l~~~--~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~~~~~e~ 95 (187)
T 3dwv_A 18 KKMSAASSIFDFEVLDADHKPYNLVQH--KGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFPSNQFGGQEP 95 (187)
T ss_dssp --CTTCCSGGGSCCBBTTSCBCCGGGG--TTSCEEEEEECCBCSCCTTHHHHHHHHHHHHGGGTCEEEEEEBCCCSSCSS
T ss_pred hhhcCCCccCCeEEEcCCCCEeeHHHh--CCCEEEEEEecCCCCCcHHHHHHHHHHHHHhhhCCeEEEEEECcccCCCCC
Confidence 346778899999999999999999997 34678888899999999999999999999999999999999975
Q ss_pred -CHHHHHHHHhh
Q 025756 140 -SVEQARTFSEQ 150 (248)
Q Consensus 140 -~~~~~~~f~~~ 150 (248)
+.+.+++|+++
T Consensus 96 ~~~~~~~~~~~~ 107 (187)
T 3dwv_A 96 GNEEEIKEFVCT 107 (187)
T ss_dssp SBTTHHHHSCCB
T ss_pred CCHHHHHHHHHh
Confidence 46788999883
No 88
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=99.68 E-value=1.4e-16 Score=128.55 Aligned_cols=95 Identities=18% Similarity=0.213 Sum_probs=77.9
Q ss_pred CccccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCC--------
Q 025756 68 SEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG-------- 139 (248)
Q Consensus 68 ~~~~g~~ap~f~L~d~~G~~v~l~~l~~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~-------- 139 (248)
..++|+.+|+|++.|.+|+.++++++ + ++.+|++|+..||+.|+.++..|.+.++++. ++.+|+|+.+
T Consensus 10 ~~~~g~~~p~~~l~~~~g~~~~l~~~-~-gk~~lv~F~~~~C~~C~~~~~~l~~l~~~~~--~v~vv~i~~d~~~~~~~~ 85 (165)
T 3ha9_A 10 SEEVLEREASFSLTTIDGEVISLNNV-G-GDVVILWFMAAWCPSCVYMADLLDRLTEKYR--EISVIAIDFWTAEALKAL 85 (165)
T ss_dssp HHHHHHHHHCCCEEBTTSCEECGGGC-C-SSEEEEEEECTTCTTHHHHHHHHHHHHHHCT--TEEEEEEECCSHHHHHHH
T ss_pred cccccCcCCCCEeecCCCCEeeHHHh-C-CCEEEEEEECCCCcchhhhHHHHHHHHHHcC--CcEEEEEEeccccccccc
Confidence 36889999999999999999999997 3 3566666669999999999999999999987 9999999986
Q ss_pred -----------CHHHHHHHHhhcCC-CC----CCChHHHHHcCC
Q 025756 140 -----------SVEQARTFSEQTKF-KG----DPNHSSYEALSF 167 (248)
Q Consensus 140 -----------~~~~~~~f~~~~~f-p~----Dp~~~~y~alGl 167 (248)
+.+.+++|.+++++ ++ | +.++.+.||+
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-~~~~~~~~~v 128 (165)
T 3ha9_A 86 GLNKPGYPPPDTPEMFRKFIANYGDPSWIMVMD-DGSLVEKFNV 128 (165)
T ss_dssp TCCSTTSCCCCCHHHHHHHHHHHSCTTSEEEEC-CSHHHHHTTC
T ss_pred ccccccCCCCCCHHHHHHHHHHcCCCCeeEEeC-hHHHHHHhCC
Confidence 66788888887765 33 6 5555555543
No 89
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=99.68 E-value=4.1e-16 Score=122.08 Aligned_cols=117 Identities=9% Similarity=0.134 Sum_probs=95.1
Q ss_pred cccCcCCCcEE--ecCCCCeEeCCCccCCCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCC------CH
Q 025756 70 DTKNLLDTVKV--YDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG------SV 141 (248)
Q Consensus 70 ~~g~~ap~f~L--~d~~G~~v~l~~l~~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~------~~ 141 (248)
++|+.+|+|++ .|.+|+.++++++ +++ .+|++|+..||+.|+.++..|.+.++++.+. +.+++|+.+ +.
T Consensus 2 ~~g~~~P~f~~~~~~~~g~~~~~~~~-~gk-~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~-~~~~~v~~~~~~~~~~~ 78 (148)
T 2b5x_A 2 KLRQPMPELTGEKAWLNGEVTREQLI-GEK-PTLIHFWSISCHLCKEAMPQVNEFRDKYQDQ-LNVVAVHMPRSEDDLDP 78 (148)
T ss_dssp CTTCBCCCCCCCSEEESCCCCHHHHT-TTS-CEEEEEECTTCHHHHHHHHHHHHHHHHHTTT-SEEEEEECCCSTTTSSH
T ss_pred CCCCCCCCCccccccccCcccchhhc-CCC-EEEEEEEcCCCHHHHHHhHHHHHHHHHhcCC-cEEEEEEcCCCccccCH
Confidence 67999999999 7899999999986 344 4555666899999999999999999999776 999999977 57
Q ss_pred HHHHHHHhhcCCCC----CCChHHHHHcCCccccccccCchhhHHHHHHHHhhhhhhccccccccccCCCceeeceEEEE
Q 025756 142 EQARTFSEQTKFKG----DPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVA 217 (248)
Q Consensus 142 ~~~~~f~~~~~fp~----Dp~~~~y~alGl~~~~~~~~~P~a~~~~~k~~~~g~~~~~~~~~~g~~~~~~~~qlgG~fVv 217 (248)
+.+++|++++++++ |++.++.+.||+. ..|..||+
T Consensus 79 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~-----------------------------------------~~P~~~li 117 (148)
T 2b5x_A 79 GKIKETAAEHDITQPIFVDSDHALTDAFENE-----------------------------------------YVPAYYVF 117 (148)
T ss_dssp HHHHHHHHHTTCCSCEEECSSCHHHHHTCCC-----------------------------------------CSSEEEEE
T ss_pred HHHHHHHHHcCCCcceEECCchhHHHHhCCC-----------------------------------------CCCEEEEE
Confidence 88999999887444 7777666666553 13468999
Q ss_pred eCCCCeEEEEEeCC
Q 025756 218 GPGKSNISYIHRDK 231 (248)
Q Consensus 218 d~gg~~I~~~h~~~ 231 (248)
|++| ++++.+.+.
T Consensus 118 d~~G-~i~~~~~g~ 130 (148)
T 2b5x_A 118 DKTG-QLRHFQAGG 130 (148)
T ss_dssp CTTC-BEEEEEESC
T ss_pred CCCC-cEEEEecCC
Confidence 9998 999988774
No 90
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=99.68 E-value=2e-15 Score=115.89 Aligned_cols=123 Identities=14% Similarity=0.145 Sum_probs=96.5
Q ss_pred cCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEE------eCCCHHHHHHH
Q 025756 74 LLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLI------GPGSVEQARTF 147 (248)
Q Consensus 74 ~ap~f~L~d~~G~~v~l~~l~~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~I------s~~~~~~~~~f 147 (248)
++|+|++.|.+|+.++++++ + ++.+|++|+..||+.|+.++..|.+.+++ ...++.+|.| ..++.+.+++|
T Consensus 1 ~~p~f~l~~~~g~~~~l~~~-~-gk~~lv~f~~~~C~~C~~~~~~l~~~~~~-~~~~~~~v~i~~~~~~~~~~~~~~~~~ 77 (138)
T 4evm_A 1 EVADFELMGVDGKTYRLSDY-K-GKKVYLKFWASWCSICLASLPDTDEIAKE-AGDDYVVLTVVSPGHKGEQSEADFKNW 77 (138)
T ss_dssp CCCCCEEEBTTSCEEEGGGG-T-TSEEEEEECCTTCHHHHHHHHHHHHHHHT-CTTTEEEEEEECTTSTTCCCHHHHHHH
T ss_pred CCCcceeECCCCCEEEHHHh-C-CCEEEEEEEcCcCHHHHHHHHHHHHHHHH-hCCCcEEEEEEcCCCCchhhHHHHHHH
Confidence 48999999999999999997 3 34567777799999999999999999888 4568999999 56677889999
Q ss_pred HhhcCC---CC--CCChHHHHHcCCccccccccCchhhHHHHHHHHhhhhhhccccccccccCCCceeeceEEEEeCCCC
Q 025756 148 SEQTKF---KG--DPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGPGKS 222 (248)
Q Consensus 148 ~~~~~f---p~--Dp~~~~y~alGl~~~~~~~~~P~a~~~~~k~~~~g~~~~~~~~~~g~~~~~~~~qlgG~fVvd~gg~ 222 (248)
.+++++ ++ |++.++.+.||+. ..|..||+|++|
T Consensus 78 ~~~~~~~~~~~~~d~~~~~~~~~~v~-----------------------------------------~~P~~~lid~~G- 115 (138)
T 4evm_A 78 YKGLDYKNLPVLVDPSGKLLETYGVR-----------------------------------------SYPTQAFIDKEG- 115 (138)
T ss_dssp HTTCCCTTCCEEECTTCHHHHHTTCC-----------------------------------------SSSEEEEECTTC-
T ss_pred HhhcCCCCeeEEECcchHHHHHcCcc-----------------------------------------cCCeEEEECCCC-
Confidence 988765 33 7777777766653 135689999998
Q ss_pred eEEEEEeCCCCCCCCCHHHHHHHh
Q 025756 223 NISYIHRDKEAGDDPDIQDILKAC 246 (248)
Q Consensus 223 ~I~~~h~~~~~~Dh~~i~eIL~al 246 (248)
+|.+.+.+. .+.+++.+.+
T Consensus 116 ~i~~~~~g~-----~~~~~l~~~l 134 (138)
T 4evm_A 116 KLVKTHPGF-----MEKDAILQTL 134 (138)
T ss_dssp CEEEEEESC-----CCHHHHHHHH
T ss_pred cEEEeecCC-----CcHHHHHHHH
Confidence 999998863 2345555554
No 91
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=99.67 E-value=1.1e-15 Score=130.72 Aligned_cols=75 Identities=12% Similarity=0.039 Sum_probs=67.0
Q ss_pred cCcCCCcEEecCC-CCeEeCCCccCCCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeC--------CCHH
Q 025756 72 KNLLDTVKVYDVN-GNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGP--------GSVE 142 (248)
Q Consensus 72 g~~ap~f~L~d~~-G~~v~l~~l~~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~--------~~~~ 142 (248)
.+.+|+|++.|.+ |+.++|+++ ++++||++|+..||++| .++.+|++.++++++.|++||+|+. ++.+
T Consensus 14 ~~~~pdF~l~d~~~G~~v~Ls~~--kGKvvll~F~At~C~~c-~e~p~L~~l~~~~~~~g~~vlgvs~d~f~~~e~~~~~ 90 (207)
T 2r37_A 14 SGTIYEYGALTIDGEEYIPFKQY--AGKYVLFVNVASYGGLT-GQYIELNALQEELAPFGLVILGFPCNQFGKQEPGENS 90 (207)
T ss_dssp -CCGGGCEEEBTTSSCEEEGGGG--TTSEEEEEEECSSSTTT-THHHHHHHHHHHHGGGTEEEEEEECCCBTTCCCSCHH
T ss_pred cCccCCeEeeeCCCCCEEcHHHh--CCCEEEEEEeCCCCCCh-HHHHHHHHHHHHhccCCEEEEEEECcccCcCCCCCHH
Confidence 5679999999999 999999997 34688889999999999 7999999999999999999999984 3567
Q ss_pred HHHHHHh
Q 025756 143 QARTFSE 149 (248)
Q Consensus 143 ~~~~f~~ 149 (248)
.+++|++
T Consensus 91 ~i~~f~~ 97 (207)
T 2r37_A 91 EILPTLK 97 (207)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8999998
No 92
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=99.67 E-value=1.2e-15 Score=131.46 Aligned_cols=76 Identities=11% Similarity=0.069 Sum_probs=68.2
Q ss_pred ccCcCCCcEEecCC-CCeEeCCCccCCCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCC--------CH
Q 025756 71 TKNLLDTVKVYDVN-GNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG--------SV 141 (248)
Q Consensus 71 ~g~~ap~f~L~d~~-G~~v~l~~l~~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~--------~~ 141 (248)
....+|+|++.|.+ |+.++|+++ ++++||++|+..||++|+ ++.+|+++++++++.|++||+|+++ +.
T Consensus 31 ~~~~~pdF~l~d~~~G~~v~Lsd~--~GKvvll~FwAt~C~~c~-e~p~L~~l~~~~~~~g~~Vlgvs~d~f~~~e~~~~ 107 (215)
T 2i3y_A 31 EKGTIYDYEAIALNKNEYVSFKQY--VGKHILFVNVATYCGLTA-QYPELNALQEELKPYGLVVLGFPCNQFGKQEPGDN 107 (215)
T ss_dssp CCCCGGGCEEEBSSSSCEEEGGGG--TTSEEEEEEECSSSGGGG-GHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCH
T ss_pred ccCCcCCcEeeeCCCCCEEcHHHh--CCCEEEEEEeCCCCCChH-hHHHHHHHHHHhccCCeEEEEEEccccCcCCCCCH
Confidence 36679999999999 999999997 346888889999999999 9999999999999999999999853 56
Q ss_pred HHHHHHHh
Q 025756 142 EQARTFSE 149 (248)
Q Consensus 142 ~~~~~f~~ 149 (248)
+.+++|++
T Consensus 108 ~~i~~f~~ 115 (215)
T 2i3y_A 108 KEILPGLK 115 (215)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 78999998
No 93
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=99.67 E-value=6.6e-16 Score=131.68 Aligned_cols=79 Identities=6% Similarity=-0.008 Sum_probs=69.8
Q ss_pred ccccCcCCCcEEecCC-CCeEeCCCccCCCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCC--------
Q 025756 69 EDTKNLLDTVKVYDVN-GNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG-------- 139 (248)
Q Consensus 69 ~~~g~~ap~f~L~d~~-G~~v~l~~l~~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~-------- 139 (248)
...++.+|+|++.|.+ |+.++|+++ ++++||++|+..|||+|++++..|.++++++++.|++||+|+.+
T Consensus 20 ~~~~~~~p~f~l~~~~~G~~v~l~~~--~Gk~vlv~FwatwC~~C~~e~p~l~~l~~~~~~~g~~vv~v~~d~~~~~e~d 97 (208)
T 2f8a_A 20 FQSMQSVYAFSARPLAGGEPVSLGSL--RGKVLLIENVASLGGTTVRDYTQMNELQRRLGPRGLVVLGFPCNQFGHQENA 97 (208)
T ss_dssp --CCCCGGGCEECBTTCSSCEEGGGG--TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTTTCS
T ss_pred hhhcCccCceEeeeCCCCCCccHHHc--CCCEEEEEEECCCCccHHHHHHHHHHHHHHccCCCeEEEEEECCcccccCCC
Confidence 3457889999999999 999999997 34688888999999999999999999999999999999999975
Q ss_pred CHHHHHHHHh
Q 025756 140 SVEQARTFSE 149 (248)
Q Consensus 140 ~~~~~~~f~~ 149 (248)
+.+.+++|++
T Consensus 98 ~~~~i~~f~~ 107 (208)
T 2f8a_A 98 KNEEILNSLK 107 (208)
T ss_dssp CHHHHHHHHH
T ss_pred CHHHHHHHHH
Confidence 4578999997
No 94
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=99.67 E-value=2.2e-15 Score=121.88 Aligned_cols=118 Identities=14% Similarity=0.097 Sum_probs=91.6
Q ss_pred CCCccccCcCCCcEEecC--CCCeEeCCCccCCCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeC-CCHH
Q 025756 66 SVSEDTKNLLDTVKVYDV--NGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGP-GSVE 142 (248)
Q Consensus 66 ~~~~~~g~~ap~f~L~d~--~G~~v~l~~l~~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~-~~~~ 142 (248)
.....+|+.+|+|++.|. +|+.+.+.++.+++++ |++|+..||++|+.++..|.+.+++ |+.+|+|+. ++.+
T Consensus 19 ~~~~~~G~~~P~f~l~~~~~~g~~~~~~~~~~gk~v-ll~F~a~~C~~C~~~~~~l~~l~~~----~v~vv~v~~~~~~~ 93 (168)
T 2b1k_A 19 LESALIGKPVPKFRLESLDNPGQFYQADVLTQGKPV-LLNVWATWCPTCRAEHQYLNQLSAQ----GIRVVGMNYKDDRQ 93 (168)
T ss_dssp CCCTTTTSBCCCCEEEESSSTTCEEEGGGGCCSSCE-EEEEECTTCHHHHHHHHHHHHHHHT----TCCEEEEEESCCHH
T ss_pred ccccccCCcCCCeEeecccCCCcEeehhHhcCCCEE-EEEEECCCCHHHHHHHHHHHHHHHC----CCEEEEEECCCChH
Confidence 345689999999999999 9999999987665555 5555599999999999999876654 899999995 4567
Q ss_pred HHHHHHhhcCCCC-----CCChHHHHHcCCccccccccCchhhHHHHHHHHhhhhhhccccccccccCCCceeeceEEEE
Q 025756 143 QARTFSEQTKFKG-----DPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVA 217 (248)
Q Consensus 143 ~~~~f~~~~~fp~-----Dp~~~~y~alGl~~~~~~~~~P~a~~~~~k~~~~g~~~~~~~~~~g~~~~~~~~qlgG~fVv 217 (248)
.+++|.+++++++ |++.++.+.||+. ..|.+|||
T Consensus 94 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~-----------------------------------------~~P~~~li 132 (168)
T 2b1k_A 94 KAISWLKELGNPYALSLFDGDGMLGLDLGVY-----------------------------------------GAPETFLI 132 (168)
T ss_dssp HHHHHHHHHCCCCSEEEEETTCHHHHHHTCC-----------------------------------------SSSEEEEE
T ss_pred HHHHHHHHcCCCCceeeECcchHHHHHcCcc-----------------------------------------ccCEEEEE
Confidence 8899998877443 5555555444432 14579999
Q ss_pred eCCCCeEEEEEeC
Q 025756 218 GPGKSNISYIHRD 230 (248)
Q Consensus 218 d~gg~~I~~~h~~ 230 (248)
|++| +|++.|.+
T Consensus 133 d~~G-~i~~~~~g 144 (168)
T 2b1k_A 133 DGNG-IIRYRHAG 144 (168)
T ss_dssp CTTS-BEEEEEES
T ss_pred CCCC-eEEEEEeC
Confidence 9998 99999886
No 95
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=99.66 E-value=1.8e-15 Score=124.73 Aligned_cols=81 Identities=19% Similarity=0.230 Sum_probs=69.7
Q ss_pred cccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCCh-hhHHHHHHHHhcHHHHHHCC--CEEEEEeC----CCHH
Q 025756 70 DTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCV-LCRKRADYLAAKKDVMDASG--VALVLIGP----GSVE 142 (248)
Q Consensus 70 ~~g~~ap~f~L~d~~G~~v~l~~l~~~~~vvlvF~R~~~Cp-~C~~~l~~L~~~~~~l~~~G--v~vV~Is~----~~~~ 142 (248)
.+|.++|+|+|.|.+|+.++++++ +++++|++|+.+||| .|..++.+|.+.++++++.| +++|+|+. |+++
T Consensus 7 P~~~~~PdF~L~d~~G~~v~l~d~--~Gk~vll~F~~t~Cp~~Cp~~~~~l~~l~~~~~~~~~~v~~v~isvDp~~Dtp~ 84 (170)
T 4hde_A 7 PLNWDLETFQFTNQDGKPFGTKDL--KGKVWVADFMFTNCQTVCPPMTANMAKLQKMAKEEKLDVQFVSFSVDPDLDKPE 84 (170)
T ss_dssp CCCBCCCCCEEECTTSCEEEHHHH--TTSCEEEEEECTTCSSSHHHHHHHHHHHHHHHHHTTCCCEEEEEESCTTTCCHH
T ss_pred CCCCcCCCcEEECCCCCEEeHHHh--CCCEEEEEEECCCCCCcccHHHHHHHHHHHhhhcccccceeEeeecCcccccHH
Confidence 468899999999999999999997 356788888999998 79999999999988887665 77888886 4678
Q ss_pred HHHHHHhhcC
Q 025756 143 QARTFSEQTK 152 (248)
Q Consensus 143 ~~~~f~~~~~ 152 (248)
.+++|+++++
T Consensus 85 ~l~~y~~~~~ 94 (170)
T 4hde_A 85 NLKAFIQKFT 94 (170)
T ss_dssp HHHHHHTTTC
T ss_pred HHHHHHHHcC
Confidence 9999998764
No 96
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=99.65 E-value=6.8e-15 Score=113.25 Aligned_cols=92 Identities=14% Similarity=0.110 Sum_probs=75.1
Q ss_pred cCcCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCC-HHHHHHHHhh
Q 025756 72 KNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS-VEQARTFSEQ 150 (248)
Q Consensus 72 g~~ap~f~L~d~~G~~v~l~~l~~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~-~~~~~~f~~~ 150 (248)
|..+|+|++.|.+|+.+++.++ +++++||. |+..||+.|+.++..|.+.++++. ++.++.|+.++ .+.+++|.++
T Consensus 2 ~~~~p~~~~~~~~g~~~~l~~~-~~k~~ll~-f~~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~~ 77 (136)
T 1zzo_A 2 VPAQLQFSAKTLDGHDFHGESL-LGKPAVLW-FWAPWCPTCQGEAPVVGQVAASHP--EVTFVGVAGLDQVPAMQEFVNK 77 (136)
T ss_dssp CCGGGCCEEEBTTSCEEEGGGG-TTSCEEEE-EECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEECSSCHHHHHHHHHH
T ss_pred CCCCCCcccccCCCCEeeHHHh-CCCeEEEE-EEcCCChhHHHHHHHHHHHHHHcC--CeEEEEEeCCCCHHHHHHHHHH
Confidence 5679999999999999999997 44555554 559999999999999999998886 89999999875 6789999988
Q ss_pred cCC-CC----CCChHHHHHcCC
Q 025756 151 TKF-KG----DPNHSSYEALSF 167 (248)
Q Consensus 151 ~~f-p~----Dp~~~~y~alGl 167 (248)
+++ ++ |++..+.+.||+
T Consensus 78 ~~~~~~~~~~d~~~~~~~~~~i 99 (136)
T 1zzo_A 78 YPVKTFTQLADTDGSVWANFGV 99 (136)
T ss_dssp TTCTTSEEEECTTCHHHHHTTC
T ss_pred cCCCceEEEEcCCcHHHHHcCC
Confidence 765 43 666666665554
No 97
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=99.64 E-value=7.2e-16 Score=121.66 Aligned_cols=80 Identities=16% Similarity=0.144 Sum_probs=70.2
Q ss_pred ccCcCCC-cEEecCCCCeEeCCCccCCCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHH-CCCEEEEEeCC-CHHHHHHH
Q 025756 71 TKNLLDT-VKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDA-SGVALVLIGPG-SVEQARTF 147 (248)
Q Consensus 71 ~g~~ap~-f~L~d~~G~~v~l~~l~~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~-~Gv~vV~Is~~-~~~~~~~f 147 (248)
.++.+|+ |++.|.+|+.++++++. ++.+|++|+..||+.|+.++..|.+.++++.+ .++.+|+|+.+ +.+.+++|
T Consensus 3 ~~~~~P~~f~l~~~~g~~~~l~~~~--gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~ 80 (144)
T 1i5g_A 3 LKKFFPYSTNVLKGAAADIALPSLA--GKTVFFYFSASWCPPSRAFTPQLIDFYKAHAEKKNFEVMLISWDESAEDFKDY 80 (144)
T ss_dssp TTTSCSSCSEEEETTEEEEEGGGGT--TSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHH
T ss_pred hhhhCCCceEEEcCCCCEecHHHcC--CCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHH
Confidence 5788999 99999999999999973 35677777889999999999999999999985 79999999998 46788999
Q ss_pred HhhcC
Q 025756 148 SEQTK 152 (248)
Q Consensus 148 ~~~~~ 152 (248)
.++++
T Consensus 81 ~~~~~ 85 (144)
T 1i5g_A 81 YAKMP 85 (144)
T ss_dssp HTTCS
T ss_pred HHhCC
Confidence 98775
No 98
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=99.64 E-value=2.4e-15 Score=138.53 Aligned_cols=121 Identities=11% Similarity=0.112 Sum_probs=101.1
Q ss_pred CCccccCcCCCcE-----EecCCCCeEeCCCccCCCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCC--
Q 025756 67 VSEDTKNLLDTVK-----VYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG-- 139 (248)
Q Consensus 67 ~~~~~g~~ap~f~-----L~d~~G~~v~l~~l~~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~-- 139 (248)
...++|+.+|+|+ +.|.+|+.++++++. ++++|++|+..||+.|+.++..|.+.++++++.|+.||+|+.+
T Consensus 49 ~~l~vG~~aPdF~~~~~wL~d~dG~~vsLsdl~--GK~vLl~F~atwC~~C~~~~p~L~~l~~~~~~~~v~vi~Vs~d~~ 126 (352)
T 2hyx_A 49 AQLESCGTAPDLKGITGWLNTPGNKPIDLKSLR--GKVVLIDFWAYSCINCQRAIPHVVGWYQAYKDSGLAVIGVHTPEY 126 (352)
T ss_dssp SSCCCCCBCCCCCSCCEEESSGGGCCCCGGGGT--TSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECCSS
T ss_pred cccCCCCcCCCccccccccCCCCCCEEcHHHhC--CCEEEEEEECCCChhHHHHHHHHHHHHHHhhcCCeEEEEEECCcc
Confidence 4478999999999 999999999999973 4567777779999999999999999999999899999999874
Q ss_pred ----CHHHHHHHHhhcC--CCC--CCChHHHHHcCCccccccccCchhhHHHHHHHHhhhhhhccccccccccCCCceee
Q 025756 140 ----SVEQARTFSEQTK--FKG--DPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQ 211 (248)
Q Consensus 140 ----~~~~~~~f~~~~~--fp~--Dp~~~~y~alGl~~~~~~~~~P~a~~~~~k~~~~g~~~~~~~~~~g~~~~~~~~ql 211 (248)
+.+.+++|+++++ ||+ |++.++.+.||+. .+
T Consensus 127 ~~~d~~~~~~~~~~~~~l~fpv~~D~~~~l~~~ygV~-----------------------------------------~~ 165 (352)
T 2hyx_A 127 AFEKVPGNVAKGAANLGISYPIALDNNYATWTNYRNR-----------------------------------------YW 165 (352)
T ss_dssp GGGGCHHHHHHHHHHHTCCSCEEECTTSHHHHHTTCC-----------------------------------------EE
T ss_pred cccCCHHHHHHHHHHcCCCccEEeCCcHHHHHHcCCC-----------------------------------------cc
Confidence 5788999999877 444 8777776666542 13
Q ss_pred ceEEEEeCCCCeEEEEEeCC
Q 025756 212 GGIIVAGPGKSNISYIHRDK 231 (248)
Q Consensus 212 gG~fVvd~gg~~I~~~h~~~ 231 (248)
|..||||++| +|++.+.+.
T Consensus 166 Pt~~lID~~G-~Iv~~~~G~ 184 (352)
T 2hyx_A 166 PAEYLIDATG-TVRHIKFGE 184 (352)
T ss_dssp SEEEEECTTS-BEEEEEESB
T ss_pred CEEEEEeCCC-eEEEEEcCC
Confidence 5789999998 999998863
No 99
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=99.64 E-value=1.6e-16 Score=129.72 Aligned_cols=82 Identities=18% Similarity=0.175 Sum_probs=59.1
Q ss_pred ccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeC--------CCHH
Q 025756 71 TKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGP--------GSVE 142 (248)
Q Consensus 71 ~g~~ap~f~L~d~~G~~v~l~~l~~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~--------~~~~ 142 (248)
-+..+|+|++.|.+|+.++++++. ++++|++|+..||+.|+ ++..|++.++++++.|+.||+|+. ++.+
T Consensus 8 ~~~~~~~f~l~d~~G~~~~l~~~~--Gk~vll~F~a~wC~~C~-~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~d~~~ 84 (171)
T 3cmi_A 8 HMSEFYKLAPVDKKGQPFPFDQLK--GKVVLIVNVASKCGFTP-QYKELEALYKRYKDEGFTIIGFPCNQFGHQEPGSDE 84 (171)
T ss_dssp --CGGGGCCCBBTTSCBCCGGGGT--TCEEEEEEEESSSCCHH-HHHHHHHHHHHHGGGTEEEEEEEECSCC--------
T ss_pred chhheeeeEEEcCCCCEecHHHcC--CCEEEEEEEecCCCcch-hHHHHHHHHHHhccCCeEEEEEECcccCCCCCCCHH
Confidence 367899999999999999999973 34666677799999999 999999999999999999999987 4567
Q ss_pred HHHHHH-hhcC--CCC
Q 025756 143 QARTFS-EQTK--FKG 155 (248)
Q Consensus 143 ~~~~f~-~~~~--fp~ 155 (248)
.+++|+ ++++ ||+
T Consensus 85 ~~~~~~~~~~~~~~p~ 100 (171)
T 3cmi_A 85 EIAQFCQLNYGVTFPI 100 (171)
T ss_dssp ----------CCCSCB
T ss_pred HHHHHHHhccCCCceE
Confidence 888998 7765 554
No 100
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=99.62 E-value=8.8e-16 Score=121.64 Aligned_cols=80 Identities=14% Similarity=0.096 Sum_probs=69.6
Q ss_pred cccCcCCC-cEEecCCCCeEeCCCccCCCeEEEEEEcCCCChhhHHHHHHHHhcHHHHH-HCCCEEEEEeCCC-HHHHHH
Q 025756 70 DTKNLLDT-VKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMD-ASGVALVLIGPGS-VEQART 146 (248)
Q Consensus 70 ~~g~~ap~-f~L~d~~G~~v~l~~l~~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~-~~Gv~vV~Is~~~-~~~~~~ 146 (248)
..++.+|+ |++.|.+| .++++++. ++.+|++|+..||+.|+.++..|.+.++++. +.++.+|+|+.+. .+.+++
T Consensus 3 ~~~~~~P~~f~l~~~~g-~~~l~~~~--gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~ 79 (146)
T 1o8x_A 3 GLDKYLPGIEKLRRGDG-EVEVKSLA--GKLVFFYFSASWCPPARGFTPQLIEFYDKFHESKNFEVVFCTWDEEEDGFAG 79 (146)
T ss_dssp CGGGTSTTCCEEEETTE-EEEGGGGT--TCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHH
T ss_pred chHhhCCCceEEEcCCC-CCcHHHhC--CCEEEEEEEccCCHHHHHHHHHHHHHHHHhhhcCCeEEEEEeCCCCHHHHHH
Confidence 56889999 99999999 99999973 3567777788999999999999999999998 3799999999984 578889
Q ss_pred HHhhcC
Q 025756 147 FSEQTK 152 (248)
Q Consensus 147 f~~~~~ 152 (248)
|.++++
T Consensus 80 ~~~~~~ 85 (146)
T 1o8x_A 80 YFAKMP 85 (146)
T ss_dssp HHTTCS
T ss_pred HHHHCC
Confidence 998765
No 101
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=99.62 E-value=2.5e-15 Score=120.39 Aligned_cols=129 Identities=9% Similarity=0.074 Sum_probs=96.9
Q ss_pred CCccccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCC------C
Q 025756 67 VSEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG------S 140 (248)
Q Consensus 67 ~~~~~g~~ap~f~L~d~~G~~v~l~~l~~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~------~ 140 (248)
+...+++.+| ++.|.+|+.+++.++ +++ .+|++|+..||+.|+.++..|.+.+++++..|+.+|+|+.+ +
T Consensus 12 ~~~~~~~~~p--~l~~~~g~~~~~~~~-~gk-~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~ 87 (164)
T 2h30_A 12 GTATVPHTMS--TMKTADNRPASVYLK-KDK-PTLIKFWASWCPLCLSELGQAEKWAQDAKFSSANLITVASPGFLHEKK 87 (164)
T ss_dssp --CCHHHHHT--TCEETTSSBGGGGCC-TTS-CEEEEECCTTCHHHHHHHHHHHHHHTCGGGTTSEEEEEECTTSTTCCC
T ss_pred CccccCCcCC--ccCCCCCCEeeHHHh-CCC-EEEEEEECCCCHHHHHHHHHHHHHHHHcccCCcEEEEEEcCCCccccC
Confidence 3446677777 788999999999986 344 55666669999999999999999999999999999999964 4
Q ss_pred HHHHHHHHhhcCCC---C--CCChHHHHHcCCccccccccCchhhHHHHHHHHhhhhhhccccccccccCCCceeeceEE
Q 025756 141 VEQARTFSEQTKFK---G--DPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGII 215 (248)
Q Consensus 141 ~~~~~~f~~~~~fp---~--Dp~~~~y~alGl~~~~~~~~~P~a~~~~~k~~~~g~~~~~~~~~~g~~~~~~~~qlgG~f 215 (248)
.+.+++|.+.++++ + |++.++.+.||+. ..|..|
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~-----------------------------------------~~P~~~ 126 (164)
T 2h30_A 88 DGEFQKWYAGLNYPKLPVVTDNGGTIAQNLNIS-----------------------------------------VYPSWA 126 (164)
T ss_dssp TTHHHHHHTTSCCTTSCEEECTTCHHHHHTTCC-----------------------------------------SSSEEE
T ss_pred HHHHHHHHHhCCCCcceEEEcCchHHHHHcCCC-----------------------------------------ccceEE
Confidence 56788888776655 3 7777776666543 134689
Q ss_pred EEeCCCCeEEEEEeCCCCCCCCCHHHHHHHh
Q 025756 216 VAGPGKSNISYIHRDKEAGDDPDIQDILKAC 246 (248)
Q Consensus 216 Vvd~gg~~I~~~h~~~~~~Dh~~i~eIL~al 246 (248)
|+|++| +|++.+.+.. +.+++.+.+
T Consensus 127 lid~~G-~i~~~~~g~~-----~~~~l~~~i 151 (164)
T 2h30_A 127 LIGKDG-DVQRIVKGSI-----NEAQALALI 151 (164)
T ss_dssp EECTTS-CEEEEEESCC-----CHHHHHHHH
T ss_pred EECCCC-cEEEEEcCCC-----CHHHHHHHH
Confidence 999998 9999887632 345554444
No 102
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.62 E-value=2.5e-15 Score=119.28 Aligned_cols=119 Identities=16% Similarity=0.085 Sum_probs=87.6
Q ss_pred CCCccccCcCCCcEEecCCC--------CeEeCCCccCCCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEe
Q 025756 66 SVSEDTKNLLDTVKVYDVNG--------NAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIG 137 (248)
Q Consensus 66 ~~~~~~g~~ap~f~L~d~~G--------~~v~l~~l~~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is 137 (248)
.+...+|+.+|+|++.|.+| +.+++.++. ++ .+|++|+..||+.|+.++..|.+.+++ .++.+|+|+
T Consensus 5 ~~~~~~g~~~p~f~l~~~~g~~~~~~~~~~~~l~~~~-gk-~~ll~f~~~~C~~C~~~~~~l~~l~~~---~~v~~v~v~ 79 (156)
T 1kng_A 5 IPSALIGRPAPQTALPPLEGLQADNVQVPGLDPAAFK-GK-VSLVNVWASWCVPCHDEAPLLTELGKD---KRFQLVGIN 79 (156)
T ss_dssp -------CBCCCCCBCCCTTCEETTEECCCBCGGGGT-TS-CEEEEEECTTCHHHHHHHHHHHHHTTC---TTSEEEEEE
T ss_pred hhhHHhCCCCCCceeeeccCcccccccCceechHHhC-CC-EEEEEEEcccCHhHHHHHHHHHHHHhc---CCeEEEEEE
Confidence 45578999999999999999 999999974 44 455566689999999999999987765 459999999
Q ss_pred CC-CHHHHHHHHhhcCCCC-----CCChHHHHHcCCccccccccCchhhHHHHHHHHhhhhhhccccccccccCCCceee
Q 025756 138 PG-SVEQARTFSEQTKFKG-----DPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQ 211 (248)
Q Consensus 138 ~~-~~~~~~~f~~~~~fp~-----Dp~~~~y~alGl~~~~~~~~~P~a~~~~~k~~~~g~~~~~~~~~~g~~~~~~~~ql 211 (248)
.+ +.+.+++|.+++++++ |++..+.+.||+. ..
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~-----------------------------------------~~ 118 (156)
T 1kng_A 80 YKDAADNARRFLGRYGNPFGRVGVDANGRASIEWGVY-----------------------------------------GV 118 (156)
T ss_dssp ESCCHHHHHHHHHHHCCCCSEEEEETTSHHHHHTTCC-----------------------------------------SS
T ss_pred CCCCHHHHHHHHHHcCCCCceeeeCchhHHHHhcCcC-----------------------------------------cc
Confidence 64 5678899998877443 6555555554432 24
Q ss_pred ceEEEEeCCCCeEEEEEeCC
Q 025756 212 GGIIVAGPGKSNISYIHRDK 231 (248)
Q Consensus 212 gG~fVvd~gg~~I~~~h~~~ 231 (248)
|.+||+|++| +|++.+.+.
T Consensus 119 P~~~~id~~G-~i~~~~~g~ 137 (156)
T 1kng_A 119 PETFVVGREG-TIVYKLVGP 137 (156)
T ss_dssp CEEEEECTTS-BEEEEEESC
T ss_pred CeEEEEcCCC-CEEEEEeCC
Confidence 5789999998 999988763
No 103
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=99.57 E-value=9.2e-15 Score=114.86 Aligned_cols=80 Identities=18% Similarity=0.212 Sum_probs=69.1
Q ss_pred cccCcCCCc-EEecCCCCeEeCCCccCCCeEEEEEEcCCCChhhHHHHHHHHhcHHHHH-HCCCEEEEEeCCC-HHHHHH
Q 025756 70 DTKNLLDTV-KVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMD-ASGVALVLIGPGS-VEQART 146 (248)
Q Consensus 70 ~~g~~ap~f-~L~d~~G~~v~l~~l~~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~-~~Gv~vV~Is~~~-~~~~~~ 146 (248)
.+|+.+|+| ++.|.+| .++++++. ++.+|++|+..||+.|+.++..|.+.+++++ +.++.+|+|+.+. .+.+++
T Consensus 3 ~~g~~~p~~~~l~~~~g-~~~l~~~~--gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~i~~d~~~~~~~~ 79 (144)
T 1o73_A 3 GLAKYLPGATNLLSKSG-EVSLGSLV--GKTVFLYFSASWCPPCRGFTPVLAEFYEKHHVAKNFEVVLISWDENESDFHD 79 (144)
T ss_dssp GGGGTSCTTCCBBCTTS-CBCSGGGT--TCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHH
T ss_pred chhhhCccceEeecCCC-cCcHHHhC--CCEEEEEEECcCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHH
Confidence 578999997 9999999 99999973 3466777789999999999999999999997 5799999999986 467888
Q ss_pred HHhhcC
Q 025756 147 FSEQTK 152 (248)
Q Consensus 147 f~~~~~ 152 (248)
|.++++
T Consensus 80 ~~~~~~ 85 (144)
T 1o73_A 80 YYGKMP 85 (144)
T ss_dssp HHTTCS
T ss_pred HHHhCC
Confidence 888765
No 104
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=99.34 E-value=2.2e-16 Score=123.68 Aligned_cols=81 Identities=11% Similarity=0.212 Sum_probs=67.8
Q ss_pred CcCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChhhHHHHHHHHhcHHHHH--HCCCEEEEEeCCC-HHHHHHHHh
Q 025756 73 NLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMD--ASGVALVLIGPGS-VEQARTFSE 149 (248)
Q Consensus 73 ~~ap~f~L~d~~G~~v~l~~l~~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~--~~Gv~vV~Is~~~-~~~~~~f~~ 149 (248)
+.+|+|+|.|.+|+.+++++++++++.+|++|+..||+.|+.++..|.+.+++++ ..++.+|+|+.++ .+.+++|++
T Consensus 2 ~~~p~~~l~~~~g~~~~l~~~~~gk~~vll~F~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~~v~~d~~~~~~~~~~~ 81 (143)
T 2lus_A 2 EFIQGIKLVKKNRCEVNANEALKDKDIIGFYFSAHWCPPCRGFTPILADMYSELVDDSAPFEIIFVSSDRSEDDMFQYMM 81 (143)
Confidence 5789999999999999999944444367777888999999999999999999985 3589999999884 467888888
Q ss_pred hcCC
Q 025756 150 QTKF 153 (248)
Q Consensus 150 ~~~f 153 (248)
++++
T Consensus 82 ~~~~ 85 (143)
T 2lus_A 82 ESHG 85 (143)
Confidence 7753
No 105
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=99.55 E-value=3.7e-15 Score=121.73 Aligned_cols=81 Identities=12% Similarity=0.135 Sum_probs=71.3
Q ss_pred ccccCcCCCc-EEecCCCCeEeCCCccCCCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHH-CCCEEEEEeCCCH-HHHH
Q 025756 69 EDTKNLLDTV-KVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDA-SGVALVLIGPGSV-EQAR 145 (248)
Q Consensus 69 ~~~g~~ap~f-~L~d~~G~~v~l~~l~~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~-~Gv~vV~Is~~~~-~~~~ 145 (248)
..+|+.+|+| ++.|.+| .++++++. ++++|++|+..||+.|+.++..|.+.++++++ .++.||+|+.+.. +.++
T Consensus 22 ~~vG~~~P~f~~l~~~~g-~v~l~~~~--gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~v~vv~v~~d~~~~~~~ 98 (165)
T 3s9f_A 22 SGVAKHLGEALKLRKQAD-TADMDSLS--GKTVFFYFSASWCPPCRGFTPQLVEFYEKHHDSKNFEIILASWDEEEDDFN 98 (165)
T ss_dssp CHHHHHHHHTSCEEETTE-EECSGGGT--TSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHH
T ss_pred hhhcccCCcceeeecCCC-cccHHHcC--CCEEEEEEECCcChhHHHHHHHHHHHHHHhccCCCeEEEEEecCCCHHHHH
Confidence 3789999999 9999999 99999973 45677777899999999999999999999986 7999999998866 6788
Q ss_pred HHHhhcC
Q 025756 146 TFSEQTK 152 (248)
Q Consensus 146 ~f~~~~~ 152 (248)
+|.++++
T Consensus 99 ~~~~~~~ 105 (165)
T 3s9f_A 99 AYYAKMP 105 (165)
T ss_dssp HHHTTCS
T ss_pred HHHHhCC
Confidence 8988765
No 106
>4h86_A Peroxiredoxin type-2; oxidoreductase; 2.00A {Saccharomyces cerevisiae} PDB: 4dsq_A 4dsr_A 4dss_A
Probab=99.25 E-value=1.4e-10 Score=98.88 Aligned_cols=147 Identities=16% Similarity=0.228 Sum_probs=110.3
Q ss_pred CCCccccCcCCC--cEE--e-----cCC----C--CeEeCCCcc-CCCeEEEEEEcCCCChhhHH-HHHHHHhcHHHH-H
Q 025756 66 SVSEDTKNLLDT--VKV--Y-----DVN----G--NAIPISDLW-KDRKAVVAFARHFGCVLCRK-RADYLAAKKDVM-D 127 (248)
Q Consensus 66 ~~~~~~g~~ap~--f~L--~-----d~~----G--~~v~l~~l~-~~~~vvlvF~R~~~Cp~C~~-~l~~L~~~~~~l-~ 127 (248)
..+..+++++|. ++. . +.+ | +.+++++++ +++++||+++++++.|.|.. +++.+.+.++++ +
T Consensus 23 ~~~~~v~~~~P~gdv~f~yip~~~~~~~~~~c~~P~~v~ls~~~~k~KkVVLf~vPGAFTPtCS~~hlPgf~~~~d~~~k 102 (199)
T 4h86_A 23 SMSDLVNKKFPAGDYKFQYIAISQSDADSESCKMPQTVEWSKLISENKKVIITGAPAAFSPTCTVSHIPGYINYLDELVK 102 (199)
T ss_dssp CBCTTTTSBCCCTTCEEEECCCCSSSTTSGGGTSCEEEEHHHHHHHCSEEEEEECSCTTCHHHHHTTHHHHHHHHHHHHH
T ss_pred hhHHHhCCCCCCCCceEEEecCCccccccccCCCCeeeEHHHHhcCCCeEEEEEeCCCcCCcCChhhChHHHHHHHHHHH
Confidence 345689999995 321 1 112 3 367777876 46789999999999999976 799999998876 7
Q ss_pred HCCC-EEEEEeCCCHHHHHHHHhhcC------CCC--CCChHHHHHcCCccccccccCchhhHHHHHHHHhhhhhhcccc
Q 025756 128 ASGV-ALVLIGPGSVEQARTFSEQTK------FKG--DPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLS 198 (248)
Q Consensus 128 ~~Gv-~vV~Is~~~~~~~~~f~~~~~------fp~--Dp~~~~y~alGl~~~~~~~~~P~a~~~~~k~~~~g~~~~~~~~ 198 (248)
++|+ +|++|+.+++.-.++|.+.++ +++ |++.++.++||+..... + .+.
T Consensus 103 ~kGvd~I~ciSVND~FVm~AW~k~~~~~~~~~i~~laD~~~eftkalGl~~~~~--~-------------gg~------- 160 (199)
T 4h86_A 103 EKEVDQVIVVTVDNPFANQAWAKSLGVKDTTHIKFASDPGCAFTKSIGFELAVG--D-------------GVY------- 160 (199)
T ss_dssp HSCCCEEEEEESSCHHHHHHHHHHTTCCCCSSEEEEECGGGHHHHHTTCEEEEE--T-------------TEE-------
T ss_pred hcCCcEEEEEEcCCHHHHHHHHHHhcccccccccccCCcchHHHHhcCceeecC--C-------------Ccc-------
Confidence 8998 699999999999999998764 333 99999999999864321 0 011
Q ss_pred ccccccCCCceeeceEEEEeCCCCeEEEEEeCCCCCCC---CCHHHHHHHh
Q 025756 199 FERDTVSRGGWQQGGIIVAGPGKSNISYIHRDKEAGDD---PDIQDILKAC 246 (248)
Q Consensus 199 ~~g~~~~~~~~qlgG~fVvd~gg~~I~~~h~~~~~~Dh---~~i~eIL~al 246 (248)
...+-++||| +| +|.|.++..++++. -..|.||+.|
T Consensus 161 ----------RS~Rya~IVd-DG-vV~~~~vE~~pg~~~~vS~ae~vL~~L 199 (199)
T 4h86_A 161 ----------WSGRWAMVVE-NG-IVTYAAKETNPGTDVTVSSVESVLAHL 199 (199)
T ss_dssp ----------EECSEEEEEE-TT-EEEEEEECSSTTTCCSTTSHHHHHTTC
T ss_pred ----------eeeEEEEEEE-CC-EEEEEEEeCCCCCCCcccCHHHHHhcC
Confidence 1234689999 77 99999999888764 4578888754
No 107
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=98.72 E-value=4.6e-08 Score=74.97 Aligned_cols=64 Identities=8% Similarity=0.069 Sum_probs=45.9
Q ss_pred CcCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCC
Q 025756 73 NLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG 139 (248)
Q Consensus 73 ~~ap~f~L~d~~G~~v~l~~l~~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~ 139 (248)
+.+++++..+.+|+... .. ...++.+|++|+..||+.|+.....|.+...+++ .++.++.|..+
T Consensus 4 ~~~~~l~~~~~~~~~~~-~~-~~~~k~~lv~f~a~wC~~C~~~~~~l~~~~~~~~-~~v~~~~v~~~ 67 (126)
T 2l57_A 4 EGIKQINFQSINVVENL-EE-AKEGIPTIIMFKTDTCPYCVEMQKELSYVSKERE-GKFNIYYARLE 67 (126)
T ss_dssp CCSSCTTTTCCSEESST-TT-CCSSSCEEEEEECSSCHHHHHHHHHHHHHHHHSS-SSCEEEEEETT
T ss_pred cccCCCCccccchhHHH-HH-HhCCCcEEEEEECCCCccHHHHHHHHHHHHHHhc-CCeEEEEEeCC
Confidence 34556666666654432 22 2344566777789999999999999999888876 68999999844
No 108
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=98.63 E-value=1.9e-08 Score=80.82 Aligned_cols=76 Identities=13% Similarity=0.072 Sum_probs=46.8
Q ss_pred cCCCCCCCccccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChhhHHHHHHH---HhcHHHHHHCCCEEEEEe
Q 025756 61 SESPPSVSEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYL---AAKKDVMDASGVALVLIG 137 (248)
Q Consensus 61 ~~~~~~~~~~~g~~ap~f~L~d~~G~~v~l~~l~~~~~vvlvF~R~~~Cp~C~~~l~~L---~~~~~~l~~~Gv~vV~Is 137 (248)
+.+....-...+...+++ +..|+.+.+.+. +++++||.|+...||+.|+.+...| .+....+ ..++.+|.|.
T Consensus 16 ~~~~~~~l~~~~~~~~~~---~~~~~~~~~a~~-~gk~vlv~F~ga~wC~~C~~~~p~l~~~~~~~~~~-~~~~~~v~vd 90 (154)
T 2ju5_A 16 SGENLQQTRPIAAANLQW---ESYAEALEHSKQ-DHKPIGLFFTGSDWCMWCIKMQDQILQSSEFKHFA-GVHLHMVEVD 90 (154)
T ss_dssp CCCCSSCCCSSCCCCCCE---ECHHHHHHHHHH-HCCCEEEEEECTTTCHHHHHHHHHTTTSHHHHHHH-HHHCEEEEEE
T ss_pred hhhcchhhhhcccCCCCC---CCHHHHHHHHHh-CCCeEEEEEeCCCCCHhHHHHHHHHhcCHHHHHHh-cCcEEEEEec
Confidence 333333444555556666 445677777664 3445554444489999999999999 4443333 3467788877
Q ss_pred CCCH
Q 025756 138 PGSV 141 (248)
Q Consensus 138 ~~~~ 141 (248)
.+..
T Consensus 91 ~~~~ 94 (154)
T 2ju5_A 91 FPQK 94 (154)
T ss_dssp CCSS
T ss_pred Cccc
Confidence 6653
No 109
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=98.39 E-value=1.4e-06 Score=67.23 Aligned_cols=43 Identities=19% Similarity=0.248 Sum_probs=35.5
Q ss_pred CeEEEEEEcCCCChhhHHHHHHHH--hcHHHHHHCCCEEEEEeCCC
Q 025756 97 RKAVVAFARHFGCVLCRKRADYLA--AKKDVMDASGVALVLIGPGS 140 (248)
Q Consensus 97 ~~vvlvF~R~~~Cp~C~~~l~~L~--~~~~~l~~~Gv~vV~Is~~~ 140 (248)
++.+|++|+..||+.|+.....|. +...++.. ++.++.|..++
T Consensus 29 ~k~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~~~-~~~~~~vd~~~ 73 (133)
T 3fk8_A 29 HKPTLLVFGANWCTDCRALDKSLRNQKNTALIAK-HFEVVKIDVGN 73 (133)
T ss_dssp TCCEEEEEECTTCHHHHHHHHHHTSHHHHHHHHH-HCEEEEEECTT
T ss_pred CCcEEEEEcCCCCHHHHHHHHHhCCHHHHHHhcC-CEEEEEEeCCc
Confidence 566777888999999999999999 77777753 68999998764
No 110
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=98.25 E-value=1.4e-07 Score=73.56 Aligned_cols=89 Identities=11% Similarity=0.103 Sum_probs=57.6
Q ss_pred ccccCcCCCcE-EecCCCCeEeCCCccCCCeEEEEEEcCCCChhhHHHHHHH---HhcHHHHHHCCCEEEEEeCCCH-HH
Q 025756 69 EDTKNLLDTVK-VYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYL---AAKKDVMDASGVALVLIGPGSV-EQ 143 (248)
Q Consensus 69 ~~~g~~ap~f~-L~d~~G~~v~l~~l~~~~~vvlvF~R~~~Cp~C~~~l~~L---~~~~~~l~~~Gv~vV~Is~~~~-~~ 143 (248)
...+..+|+|. +.+.++....++++. + +.+|++|+..||+.|+.....+ .+...+++ ++.++.|..+.. +.
T Consensus 4 ~~~~~~~~~f~~~~~~~~~~~~l~~~~-~-k~vlv~F~a~wC~~C~~~~~~~~~~~~l~~~~~--~~~~~~vd~~~~~~~ 79 (134)
T 2fwh_A 4 TAQTQTHLNFTQIKTVDELNQALVEAK-G-KPVMLDLYADWCVACKEFEKYTFSDPQVQKALA--DTVLLQANVTANDAQ 79 (134)
T ss_dssp ------CCCCEECCSHHHHHHHHHHHT-T-SCEEEEEECTTCHHHHHHHHHTTTSHHHHHHTT--TSEEEEEECTTCCHH
T ss_pred ccccccCCCcEEecCHHHHHHHHHHhc-C-CcEEEEEECCCCHHHHHHHHHhcCCHHHHHHhc--CcEEEEEeCCCCcch
Confidence 46678899998 666666666666642 3 4556666689999999988777 66666654 699999998653 34
Q ss_pred HHHHHhhcC---CCC----CCChHH
Q 025756 144 ARTFSEQTK---FKG----DPNHSS 161 (248)
Q Consensus 144 ~~~f~~~~~---fp~----Dp~~~~ 161 (248)
...++++++ +|- |++.++
T Consensus 80 ~~~l~~~~~v~~~Pt~~~~d~~G~~ 104 (134)
T 2fwh_A 80 DVALLKHLNVLGLPTILFFDGQGQE 104 (134)
T ss_dssp HHHHHHHTTCCSSSEEEEECTTSCB
T ss_pred HHHHHHHcCCCCCCEEEEECCCCCE
Confidence 455555554 553 777665
No 111
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=98.19 E-value=1.2e-05 Score=59.80 Aligned_cols=41 Identities=15% Similarity=-0.014 Sum_probs=33.4
Q ss_pred CeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCC
Q 025756 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG 139 (248)
Q Consensus 97 ~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~ 139 (248)
++.+|+.|+..||+.|+.....|.+...++. ++.++.|..+
T Consensus 24 ~~~vlv~f~a~wC~~C~~~~~~l~~~~~~~~--~v~~~~vd~~ 64 (111)
T 2pu9_C 24 DKPVVLDMFTQWCGPSKAMAPKYEKLAEEYL--DVIFLKLDCN 64 (111)
T ss_dssp TSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEECS
T ss_pred CCEEEEEEECCcCHhHHHHCHHHHHHHHHCC--CeEEEEEecC
Confidence 4556667777999999999999998887764 5888888876
No 112
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=98.11 E-value=4.5e-06 Score=64.17 Aligned_cols=66 Identities=9% Similarity=0.111 Sum_probs=43.8
Q ss_pred cccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCC
Q 025756 70 DTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS 140 (248)
Q Consensus 70 ~~g~~ap~f~L~d~~G~~v~l~~l~~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~ 140 (248)
+....+|+++ +.+++.++... .+++.+|+.|+..||+.|+.....|.+...++. .++.++.|..+.
T Consensus 19 ~~~~~~~~~~--~~~~~~~~~~~--~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~-~~v~~~~vd~d~ 84 (128)
T 3ul3_B 19 RMFKKVPRLQ--QNGSNIINGVN--MKNTVIVLYFFAKWCQACTMQSTEMDKLQKYYG-KRIYLLKVDLDK 84 (128)
T ss_dssp -------CCC--CCCCSSSSBTT--SCCSEEEEEEECTTCHHHHHHHHHHHHHHHHHG-GGEEEEEEEGGG
T ss_pred HHhccCCccc--cCCccHHHHHH--ccCCEEEEEEECCCCHHHHHHhHHHHHHHHHhc-CCeEEEEEECCC
Confidence 4455666666 44455444443 345678888889999999999999999988886 368888887654
No 113
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=98.09 E-value=2e-05 Score=59.70 Aligned_cols=41 Identities=17% Similarity=0.079 Sum_probs=32.5
Q ss_pred CeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCC
Q 025756 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG 139 (248)
Q Consensus 97 ~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~ 139 (248)
++.+|++|+..||+.|+.....|.+...++. ++.++.|..+
T Consensus 37 ~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~--~~~~~~vd~~ 77 (124)
T 1faa_A 37 DKPVVLDMFTQWCGPCKAMAPKYEKLAEEYL--DVIFLKLDCN 77 (124)
T ss_dssp TSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEECS
T ss_pred CCEEEEEEECCcCHhHHHHhHHHHHHHHHCC--CCEEEEEecC
Confidence 3445556669999999999999998887764 6888888766
No 114
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=98.08 E-value=2.1e-06 Score=66.64 Aligned_cols=79 Identities=9% Similarity=-0.011 Sum_probs=55.9
Q ss_pred EecCCCCeEeCCCccCCCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCCHHHHHHHHhhcCCCC----
Q 025756 80 VYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKG---- 155 (248)
Q Consensus 80 L~d~~G~~v~l~~l~~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~~~~~~~f~~~~~fp~---- 155 (248)
|.+.+|..+.++++ +++.+|++|+..||+.|+.....|.+...++.. .+.++.|..+....+.+-..-.++|-
T Consensus 36 l~~~~~~~~~l~~~--~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~ 112 (141)
T 3hxs_A 36 IADYENHSKEWKYL--GDKPAIVDFYADWCGPCKMVAPILEELSKEYAG-KIYIYKVNVDKEPELARDFGIQSIPTIWFV 112 (141)
T ss_dssp TCCCSSCCCCCCCC--CSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTT-TCEEEEEETTTCHHHHHHTTCCSSSEEEEE
T ss_pred hhccccchhHHHHh--CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcC-ceEEEEEECCCCHHHHHHcCCCCcCEEEEE
Confidence 56677888888875 345666667789999999999999998888764 59999999886543322222233663
Q ss_pred CCChHH
Q 025756 156 DPNHSS 161 (248)
Q Consensus 156 Dp~~~~ 161 (248)
|++.++
T Consensus 113 ~~~g~~ 118 (141)
T 3hxs_A 113 PMKGEP 118 (141)
T ss_dssp CSSSCC
T ss_pred eCCCCE
Confidence 666554
No 115
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=98.03 E-value=2.5e-05 Score=59.47 Aligned_cols=42 Identities=10% Similarity=0.084 Sum_probs=27.6
Q ss_pred CeEEEEEEcCCCChhhHHHHHHH---HhcHHHHHHCCCEEEEEeCC
Q 025756 97 RKAVVAFARHFGCVLCRKRADYL---AAKKDVMDASGVALVLIGPG 139 (248)
Q Consensus 97 ~~vvlvF~R~~~Cp~C~~~l~~L---~~~~~~l~~~Gv~vV~Is~~ 139 (248)
++.+|++|+..||+.|+.....+ .+..+.+ ..++.++.|..+
T Consensus 27 ~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~-~~~~~~~~vd~~ 71 (130)
T 2kuc_A 27 DKLLFVDCFTTWCGPCKRLSKVVFKDSLVADYF-NRHFVNLKMDME 71 (130)
T ss_dssp SSCEEEEECCTTCTHHHHHHHHGGGCHHHHHHH-HHHSEEEEECSS
T ss_pred CCeEEEEEECCCCccHHHHHHHhcCcHHHHHHH-hcCeEEEEEecC
Confidence 35667777799999999999888 3333332 234556666554
No 116
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.01 E-value=5.6e-06 Score=64.05 Aligned_cols=60 Identities=17% Similarity=0.213 Sum_probs=45.0
Q ss_pred EecCCCCeEeCCCccCCCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCC--CEEEEEeCCCH
Q 025756 80 VYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASG--VALVLIGPGSV 141 (248)
Q Consensus 80 L~d~~G~~v~l~~l~~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~G--v~vV~Is~~~~ 141 (248)
+.+.+++.+. ++..+++.+|++|+..||+.|+.....|.+...++...+ +.++.|..+..
T Consensus 19 v~~l~~~~~~--~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~ 80 (140)
T 2dj1_A 19 VWVLNDGNFD--NFVADKDTVLLEFYAPWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDATSA 80 (140)
T ss_dssp EEECCTTTHH--HHHTTCSEEEEEECCTTCHHHHTTHHHHHHHHHHHHSSSSCCEEEEECTTTC
T ss_pred CEEcChHhHH--HHHhcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCceEEEEEeCccc
Confidence 4445555433 344556788889999999999999999999999987764 77777776654
No 117
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=97.97 E-value=5.3e-06 Score=65.25 Aligned_cols=70 Identities=17% Similarity=0.127 Sum_probs=53.2
Q ss_pred cccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCCHH
Q 025756 70 DTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVE 142 (248)
Q Consensus 70 ~~g~~ap~f~L~d~~G~~v~l~~l~~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~~~ 142 (248)
..+..+++..+.+.+++.+. ++...++.+|++|+..||+.|+.....|.+...++.. .+.++.|..+...
T Consensus 30 ~~~~~~~~~~v~~l~~~~~~--~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~-~~~~~~vd~~~~~ 99 (148)
T 3p2a_A 30 RCGHSLFDGEVINATAETLD--KLLQDDLPMVIDFWAPWCGPCRSFAPIFAETAAERAG-KVRFVKVNTEAEP 99 (148)
T ss_dssp TTCCBTTCCCCEECCTTTHH--HHTTCSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTCH
T ss_pred hcCCccccCCceecCHHHHH--HHHhcCCcEEEEEECCCCHHHHHHHHHHHHHHHHcCC-ceEEEEEECcCCH
Confidence 44667788888888776644 3334556777777899999999999999998888753 4888888876543
No 118
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=97.96 E-value=5.4e-07 Score=73.20 Aligned_cols=64 Identities=8% Similarity=0.141 Sum_probs=41.3
Q ss_pred CcCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCC
Q 025756 73 NLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS 140 (248)
Q Consensus 73 ~~ap~f~L~d~~G~~v~l~~l~~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~ 140 (248)
...+++...|.+ +.+..... .++.+|+.|+..||+.|+.....|.+..... +.++.++.|..+.
T Consensus 25 ~~~~~i~w~~~~-~~~~~~~~--~~k~vlv~F~a~WC~~C~~~~p~l~~~~~~~-~~~~~~~~v~~d~ 88 (164)
T 1sen_A 25 GFGDHIHWRTLE-DGKKEAAA--SGLPLMVIIHKSWCGACKALKPKFAESTEIS-ELSHNFVMVNLED 88 (164)
T ss_dssp TSCTTSCBCCHH-HHHHHHHH--HTCCEEEEEECTTCHHHHHHHHHHHTCHHHH-HHHTTSEEEEEEG
T ss_pred cccccccccCHH-HHHHHHHh--cCCeEEEEEECCCCHHHHHHHHHHHHHHHHh-hcCCeEEEEEecC
Confidence 344555555544 34443332 3445666777999999999999999975543 3357777777654
No 119
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=97.93 E-value=3.1e-06 Score=64.46 Aligned_cols=60 Identities=12% Similarity=0.161 Sum_probs=45.7
Q ss_pred EecCCCCeEeCCC-ccCCCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCCH
Q 025756 80 VYDVNGNAIPISD-LWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV 141 (248)
Q Consensus 80 L~d~~G~~v~l~~-l~~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~~ 141 (248)
|.+.+|....+.+ +.+.++.+|++|+..||+.|+.....|.+...++ .++.++.|..+..
T Consensus 5 v~~~~g~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~~~l~~l~~~~--~~v~~~~vd~~~~ 65 (118)
T 2f51_A 5 IVHFNGTHEALLNRIKEAPGLVLVDFFATWCGPCQRLGQILPSIAEAN--KDVTFIKVDVDKN 65 (118)
T ss_dssp SEEECSCHHHHHHHHHHCSSCEEEEEECTTCHHHHHHHHHHHHHHHHC--TTSEEEEEETTTC
T ss_pred ceEecCCHHHHHHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHC--CCeEEEEEECCCC
Confidence 4455666666663 3334566777888999999999999999888777 6899999988754
No 120
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=97.86 E-value=8e-05 Score=57.53 Aligned_cols=42 Identities=19% Similarity=0.179 Sum_probs=34.0
Q ss_pred CeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCC
Q 025756 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS 140 (248)
Q Consensus 97 ~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~ 140 (248)
++.+|++|+..||+.|+.....|.+...++ .++.++.|..+.
T Consensus 46 ~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~--~~v~~~~v~~~~ 87 (139)
T 3d22_A 46 GKIVLANFSARWCGPSRQIAPYYIELSENY--PSLMFLVIDVDE 87 (139)
T ss_dssp TCCEEEEEECTTCHHHHHHHHHHHHHHHHC--TTSEEEEEETTT
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHHC--CCCEEEEEeCcc
Confidence 345666777899999999999999888776 378999988763
No 121
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=97.82 E-value=3.1e-05 Score=59.00 Aligned_cols=48 Identities=6% Similarity=0.008 Sum_probs=38.2
Q ss_pred CCCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCCHHH
Q 025756 95 KDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQ 143 (248)
Q Consensus 95 ~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~~~~ 143 (248)
+.++.+|++|+..||+.|+.....|.+...+++. .+.++.|..+....
T Consensus 33 ~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~-~~~~~~vd~~~~~~ 80 (130)
T 2dml_A 33 QSDGLWLVEFYAPWCGHCQRLTPEWKKAATALKD-VVKVGAVNADKHQS 80 (130)
T ss_dssp TCSSCEEEEEECTTCSTTGGGHHHHHHHHHHTTT-TSEEEEEETTTCHH
T ss_pred cCCCeEEEEEECCCCHHHHhhCHHHHHHHHHhcC-ceEEEEEeCCCCHH
Confidence 3455777788899999999999999988888754 38899998876543
No 122
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.81 E-value=3.4e-05 Score=58.64 Aligned_cols=49 Identities=8% Similarity=0.003 Sum_probs=40.3
Q ss_pred CccCCCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCCHH
Q 025756 92 DLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVE 142 (248)
Q Consensus 92 ~l~~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~~~ 142 (248)
++++ ++ +|++|+..||+.|+.....|.+...++...++.++.|..+...
T Consensus 19 ~~~~-~~-vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~v~~~~vd~~~~~ 67 (126)
T 1x5e_A 19 ELLE-GD-WMIEFYAPWCPACQNLQPEWESFAEWGEDLEVNIAKVDVTEQP 67 (126)
T ss_dssp HHTS-SE-EEEEEECSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEETTTCH
T ss_pred HHhC-CC-EEEEEECCCCHHHHHHhHHHHHHHHHhccCCeEEEEEECcCCH
Confidence 4443 35 6788889999999999999999988887778999999887654
No 123
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=97.78 E-value=1.7e-05 Score=57.91 Aligned_cols=48 Identities=15% Similarity=0.095 Sum_probs=36.3
Q ss_pred CccCCCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCC
Q 025756 92 DLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS 140 (248)
Q Consensus 92 ~l~~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~ 140 (248)
+..+.++.+|++|...||+.|+.....|.+...++.. .+.++.|..+.
T Consensus 12 ~~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~-~v~~~~v~~~~ 59 (105)
T 1nsw_A 12 QAIQGDGPVLVDFWAAWCGPCRMMAPVLEEFAEAHAD-KVTVAKLNVDE 59 (105)
T ss_dssp HHHSSSSCEEEEEECTTCHHHHHHHHHHHHHHHHSTT-TCEEEEEETTT
T ss_pred HHHhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcC-CcEEEEEECcC
Confidence 3334445667777799999999999999888877754 38888887654
No 124
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=97.77 E-value=1.8e-05 Score=59.09 Aligned_cols=49 Identities=12% Similarity=0.062 Sum_probs=39.0
Q ss_pred CCCccCCCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCC
Q 025756 90 ISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS 140 (248)
Q Consensus 90 l~~l~~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~ 140 (248)
|.+..++++.+|++|+..||+.|+.....|.+...++. ++.++.|..+.
T Consensus 17 f~~~~~~~k~vlv~f~a~wC~~C~~~~p~l~~l~~~~~--~~~~~~vd~~~ 65 (109)
T 3f3q_A 17 FDSAIAQDKLVVVDFYATWCGPCKMIAPMIEKFSEQYP--QADFYKLDVDE 65 (109)
T ss_dssp HHHHTTSSSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTT
T ss_pred HHHHHhcCCEEEEEEECCcCHhHHHHHHHHHHHHHHCC--CCEEEEEECCC
Confidence 34455556778888899999999999999999888774 58888887654
No 125
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=97.74 E-value=1.4e-05 Score=60.92 Aligned_cols=49 Identities=14% Similarity=0.072 Sum_probs=39.9
Q ss_pred ccCCCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCCH
Q 025756 93 LWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV 141 (248)
Q Consensus 93 l~~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~~ 141 (248)
+++.++.+|++|...||+.|+.....|.+..+++...++.++.|..+..
T Consensus 29 ~l~~~k~vvv~f~a~~C~~C~~~~~~l~~l~~~~~~~~v~~~~vd~d~~ 77 (121)
T 2j23_A 29 VTGGDKVVVIDFWATWCGPCKMIGPVFEKISDTPAGDKVGFYKVDVDEQ 77 (121)
T ss_dssp HHSSSSCEEEEEECTTCSTHHHHHHHHHHHHTSTHHHHSEEEEEETTTC
T ss_pred HHcCCCEEEEEEECCCCHhHHHHHHHHHHHHHHCcCCcEEEEEEECcCC
Confidence 3445566777778999999999999999988888777899999987653
No 126
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=97.74 E-value=4.1e-05 Score=56.44 Aligned_cols=50 Identities=12% Similarity=0.169 Sum_probs=39.9
Q ss_pred CCCccCCCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCCH
Q 025756 90 ISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV 141 (248)
Q Consensus 90 l~~l~~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~~ 141 (248)
+.++.++++.+|++|+..||+.|+.....|.+...++. ++.++.|..+..
T Consensus 11 ~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~--~~~~~~vd~~~~ 60 (105)
T 4euy_A 11 LATYIEEQQLVLLFIKTENCGVCDVMLRKVNYVLENYN--YVEKIEILLQDM 60 (105)
T ss_dssp CSSSTTCSSEEEEEEEESSCHHHHHHHHHHHHHHHTCT--TEEEEEEEECCC
T ss_pred HHHHHhcCCCEEEEEeCCCCcchHHHHHHHHHHHHHcC--CceEEEEECCCC
Confidence 45555566788888899999999999999998887773 688888876643
No 127
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=97.71 E-value=6.7e-05 Score=55.47 Aligned_cols=44 Identities=20% Similarity=0.187 Sum_probs=35.4
Q ss_pred CCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCC
Q 025756 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS 140 (248)
Q Consensus 96 ~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~ 140 (248)
.++.+|++|+..||+.|+.....|.+...++.. .+.++.|..+.
T Consensus 22 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~ 65 (112)
T 1t00_A 22 NDKPVLVDFWAAWCGPCRQIAPSLEAIAAEYGD-KIEIVKLNIDE 65 (112)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTT
T ss_pred CCCeEEEEEECCCCHhHHhcCHHHHHHHHHhcC-CeEEEEEEcCC
Confidence 345667777899999999999999988887753 48888888765
No 128
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=97.71 E-value=5.8e-05 Score=55.91 Aligned_cols=45 Identities=16% Similarity=0.168 Sum_probs=36.3
Q ss_pred CeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCCH
Q 025756 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV 141 (248)
Q Consensus 97 ~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~~ 141 (248)
++.+|++|...||+.|+.....|.+...+++..++.++.|..+..
T Consensus 21 ~~~~~v~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~vd~~~~ 65 (112)
T 3d6i_A 21 DKLIVLYFHTSWAEPCKALKQVFEAISNEPSNSNVSFLSIDADEN 65 (112)
T ss_dssp TCCEEEEEECCC--CHHHHHHHHHHHHHCGGGTTSEEEEEETTTC
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHhcCCCCEEEEEEecccC
Confidence 566777888999999999999999988887667899999988753
No 129
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=97.70 E-value=6.9e-05 Score=57.25 Aligned_cols=63 Identities=11% Similarity=0.079 Sum_probs=43.7
Q ss_pred CcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHH-CCCEEEEEeCCC
Q 025756 77 TVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDA-SGVALVLIGPGS 140 (248)
Q Consensus 77 ~f~L~d~~G~~v~l~~l~~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~-~Gv~vV~Is~~~ 140 (248)
+-.+.+.+++.+...- ...++.+|++|+..||+.|+.....|.+...++.. .++.++.|..+.
T Consensus 6 ~~~v~~l~~~~~~~~~-~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~vd~~~ 69 (133)
T 2dj3_A 6 SGPVKVVVGKTFDAIV-MDPKKDVLIEFYAPWCGHCKQLEPIYTSLGKKYKGQKDLVIAKMDATA 69 (133)
T ss_dssp SCSSEECCTTTCCCCC-TCTTSEEEEEECCTTCSHHHHHHHHHHHHHHHHTTSSSEEEEEECTTT
T ss_pred CCceEEEcCCCHHHHh-ccCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCCEEEEEecCCc
Confidence 3345555555433222 12356788888899999999999999999888865 357777776654
No 130
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=97.65 E-value=3.1e-05 Score=56.45 Aligned_cols=45 Identities=13% Similarity=0.101 Sum_probs=35.4
Q ss_pred CCCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCC
Q 025756 95 KDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS 140 (248)
Q Consensus 95 ~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~ 140 (248)
+.++.+|++|...||+.|+.....|.+...++.. ++.++.|..+.
T Consensus 16 ~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~ 60 (109)
T 2yzu_A 16 GQHPLVLVDFWAEWCAPCRMIAPILEEIAKEYEG-KLLVAKLDVDE 60 (109)
T ss_dssp HHCSEEEEEEECTTCHHHHHHHHHHHHHHHHTBT-TBEEEEEETTT
T ss_pred cCCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhC-ceEEEEEECCC
Confidence 3345666677799999999999999988887753 58888888765
No 131
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=97.65 E-value=6.3e-05 Score=56.80 Aligned_cols=44 Identities=11% Similarity=0.082 Sum_probs=36.1
Q ss_pred CCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCCH
Q 025756 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV 141 (248)
Q Consensus 96 ~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~~ 141 (248)
+++.+|++|+..||+.|+.....|.+...++.. +.++.|..+..
T Consensus 30 ~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~--v~~~~vd~d~~ 73 (116)
T 3qfa_C 30 GDKLVVVDFSATWCGPSKMIKPFFHSLSEKYSN--VIFLEVDVDDC 73 (116)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHTTCTT--SEEEEEETTTT
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC--CEEEEEECCCC
Confidence 456778888899999999999999998887754 88888887643
No 132
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=97.64 E-value=6.9e-05 Score=54.40 Aligned_cols=43 Identities=12% Similarity=0.074 Sum_probs=33.5
Q ss_pred CeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCC
Q 025756 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS 140 (248)
Q Consensus 97 ~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~ 140 (248)
++.+|++|...||+.|+.....|.+...++.. .+.++.|..+.
T Consensus 18 ~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~ 60 (105)
T 1fb6_A 18 EVPVMVDFWAPWCGPCKLIAPVIDELAKEYSG-KIAVYKLNTDE 60 (105)
T ss_dssp SSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTT
T ss_pred CCcEEEEEECCCChHHHHHHHHHHHHHHHhcC-ceEEEEEcCcc
Confidence 44556666689999999999999888877754 48888887764
No 133
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=97.64 E-value=2.9e-05 Score=57.90 Aligned_cols=47 Identities=11% Similarity=0.170 Sum_probs=37.7
Q ss_pred ccCCCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCCH
Q 025756 93 LWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV 141 (248)
Q Consensus 93 l~~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~~ 141 (248)
+.+.++.+|++|...||+.|+.....|.+...++. ++.++.|..+..
T Consensus 22 ~~~~~k~vlv~f~a~~C~~C~~~~~~l~~l~~~~~--~v~~~~vd~~~~ 68 (112)
T 1syr_A 22 IISQNELVIVDFFAEWCGPCKRIAPFYEECSKTYT--KMVFIKVDVDEV 68 (112)
T ss_dssp HHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTTT
T ss_pred HHccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcC--CCEEEEEECCCC
Confidence 33345677778889999999999999998887764 699999987754
No 134
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=97.63 E-value=0.00012 Score=53.44 Aligned_cols=44 Identities=14% Similarity=0.050 Sum_probs=35.0
Q ss_pred CCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCC
Q 025756 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS 140 (248)
Q Consensus 96 ~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~ 140 (248)
.++.+|++|...||+.|+.....|.+...++.. .+.++.|..+.
T Consensus 18 ~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~ 61 (107)
T 1dby_A 18 SSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKD-KLKCVKLNTDE 61 (107)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTT
T ss_pred CCCcEEEEEECCCCHhHHHHHHHHHHHHHHhCC-ceEEEEEECCC
Confidence 345667777789999999999999988877753 48888888764
No 135
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=97.62 E-value=0.0001 Score=53.51 Aligned_cols=44 Identities=9% Similarity=0.064 Sum_probs=35.1
Q ss_pred CeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCCH
Q 025756 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV 141 (248)
Q Consensus 97 ~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~~ 141 (248)
++.+|++|...||+.|+.....|.+...++... +.++.|..+..
T Consensus 19 ~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~-~~~~~v~~~~~ 62 (106)
T 3die_A 19 SGVQLVDFWATACGPCKMIAPVLEELAADYEGK-ADILKLDVDEN 62 (106)
T ss_dssp SSEEEEEEECSBCHHHHHHHHHHHHHHHHTTTT-CEEEEEETTTC
T ss_pred CCcEEEEEECCCCHHHHHHhHHHHHHHHHhcCC-cEEEEEECCcC
Confidence 455666667999999999999999988888643 88888887543
No 136
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=97.62 E-value=0.0001 Score=54.27 Aligned_cols=43 Identities=14% Similarity=0.160 Sum_probs=35.0
Q ss_pred CeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCC
Q 025756 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS 140 (248)
Q Consensus 97 ~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~ 140 (248)
++.+|++|...||+.|+.....|.+...++.. ++.++.|..+.
T Consensus 24 ~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~vd~~~ 66 (112)
T 1ep7_A 24 HKPIVVDFTATWCGPCKMIAPLFETLSNDYAG-KVIFLKVDVDA 66 (112)
T ss_dssp TCCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TSEEEEEETTT
T ss_pred CCeEEEEEECCCCHHHHHHHHHHHHHHHHcCC-CeEEEEEECCc
Confidence 44566667789999999999999998887754 78999888765
No 137
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=97.62 E-value=0.00012 Score=53.29 Aligned_cols=44 Identities=11% Similarity=0.042 Sum_probs=35.2
Q ss_pred CCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCC
Q 025756 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS 140 (248)
Q Consensus 96 ~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~ 140 (248)
.++.+|++|...||+.|+.....|.+...++.. ++.++.|..+.
T Consensus 19 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~ 62 (107)
T 2i4a_A 19 ASGLVLVDFWAEWCGPCKMIGPALGEIGKEFAG-KVTVAKVNIDD 62 (107)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHHHTT-SEEEEEEETTT
T ss_pred CCCEEEEEEECCCChhHHHHhHHHHHHHHHhCC-cEEEEEEECCC
Confidence 345666667789999999999999988888754 68888888664
No 138
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.62 E-value=0.00012 Score=55.70 Aligned_cols=47 Identities=13% Similarity=0.072 Sum_probs=38.8
Q ss_pred CCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHH---CCCEEEEEeCCCHH
Q 025756 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDA---SGVALVLIGPGSVE 142 (248)
Q Consensus 96 ~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~---~Gv~vV~Is~~~~~ 142 (248)
.++.+|++|+..||+.|+.....|.+...++.+ .++.++.|..+...
T Consensus 24 ~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~ 73 (133)
T 1x5d_A 24 SEDVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQTKGKVKLAAVDATVNQ 73 (133)
T ss_dssp SSSEEEEEEECTTCHHHHTHHHHHHHHHHHHHHHTTTSEEEEEEETTTCC
T ss_pred CCCeEEEEEECCCCHHHHhhcHHHHHHHHHHHhhcCCcEEEEEEECCCCH
Confidence 456778888899999999999999998888864 56888999887653
No 139
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=97.61 E-value=1.2e-05 Score=60.67 Aligned_cols=68 Identities=15% Similarity=0.128 Sum_probs=41.0
Q ss_pred ccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCC
Q 025756 71 TKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS 140 (248)
Q Consensus 71 ~g~~ap~f~L~d~~G~~v~l~~l~~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~ 140 (248)
.+...+.+.+.+.++=.-.+.+....++.+|++|...||+.|+.....|.+...++.. +.++.|..+.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~vd~~~ 75 (122)
T 2vlu_A 8 AAVAAEVISVHSLEQWTMQIEEANTAKKLVVIDFTASWCGPCRIMAPVFADLAKKFPN--AVFLKVDVDE 75 (122)
T ss_dssp ----CCCEEECSHHHHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEETTT
T ss_pred cCCCCcceeccCHHHHHHHHHHhhccCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC--cEEEEEECCC
Confidence 3455566666554331111111101234556666689999999999999988877653 8888888765
No 140
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=97.61 E-value=0.0001 Score=56.43 Aligned_cols=42 Identities=19% Similarity=0.220 Sum_probs=34.5
Q ss_pred CeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCC
Q 025756 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS 140 (248)
Q Consensus 97 ~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~ 140 (248)
++.+|++|+..||+.|+.....|.+...++. ++.++.|..+.
T Consensus 38 ~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~--~v~~~~vd~d~ 79 (124)
T 1xfl_A 38 KTLVVVDFTASWCGPCRFIAPFFADLAKKLP--NVLFLKVDTDE 79 (124)
T ss_dssp TCEEEEEEECTTCHHHHHHHHHHHHHHHHCS--SEEEEEEETTT
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHHCC--CcEEEEEECcc
Confidence 5677778888999999999999998887774 78888887653
No 141
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=97.61 E-value=0.00012 Score=54.76 Aligned_cols=60 Identities=15% Similarity=0.052 Sum_probs=42.8
Q ss_pred EecCCCCeEeCCCccCCCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHH----CCCEEEEEeCCC
Q 025756 80 VYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDA----SGVALVLIGPGS 140 (248)
Q Consensus 80 L~d~~G~~v~l~~l~~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~----~Gv~vV~Is~~~ 140 (248)
+.+.+++.+...- ...++.+|+.|+..||+.|+.....|.+...+++. .++.++.|..+.
T Consensus 9 v~~l~~~~f~~~v-~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~vd~~~ 72 (121)
T 2djj_A 9 VTVVVAKNYNEIV-LDDTKDVLIEFYAPWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDATA 72 (121)
T ss_dssp SEECCTTTTTTSS-SCTTSCEEEEEECSSCTTHHHHHHHHHHHHHHHTTSSCTTSSEEEEEETTT
T ss_pred eEEecccCHHHHh-hcCCCCEEEEEECCCCHhHHHhhHHHHHHHHHHhhcccCCceEEEEEECcc
Confidence 4455555433221 23445677777889999999999999999888875 367888887664
No 142
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=97.60 E-value=0.00012 Score=53.02 Aligned_cols=43 Identities=16% Similarity=0.111 Sum_probs=35.0
Q ss_pred CeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCCH
Q 025756 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV 141 (248)
Q Consensus 97 ~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~~ 141 (248)
++.+|++|...||+.|+.....|.+...++. ++.++.|..+..
T Consensus 19 ~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~~ 61 (104)
T 2vim_A 19 GRLIVVDFFAQWCGPCRNIAPKVEALAKEIP--EVEFAKVDVDQN 61 (104)
T ss_dssp TSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTTC
T ss_pred CCeEEEEEECCCCHHHHHhhHHHHHHHHHCC--CCEEEEEeccCC
Confidence 4556666679999999999999998877764 799999987653
No 143
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=97.59 E-value=0.00014 Score=54.96 Aligned_cols=44 Identities=14% Similarity=0.087 Sum_probs=34.9
Q ss_pred CCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCC
Q 025756 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS 140 (248)
Q Consensus 96 ~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~ 140 (248)
.++.+|++|+..||+.|+.....|.+...++.. ++.++.|..+.
T Consensus 30 ~~k~vlv~f~a~~C~~C~~~~~~l~~~~~~~~~-~v~~~~vd~d~ 73 (119)
T 1w4v_A 30 SETPVVVDFHAQWCGPCKILGPRLEKMVAKQHG-KVVMAKVDIDD 73 (119)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-SSEEEEEETTT
T ss_pred CCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcC-CeEEEEEeCCC
Confidence 344566677799999999999999988877754 58888888764
No 144
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=97.59 E-value=2.8e-05 Score=58.78 Aligned_cols=44 Identities=16% Similarity=0.082 Sum_probs=35.6
Q ss_pred CCCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCC
Q 025756 95 KDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS 140 (248)
Q Consensus 95 ~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~ 140 (248)
+.++.+|++|+..||+.|+.....|.+...++.. +.++.|..+.
T Consensus 28 ~~~k~vvv~F~a~wC~~C~~~~p~l~~~~~~~~~--v~~~~vd~~~ 71 (114)
T 2oe3_A 28 KQNDKLVIDFYATWCGPCKMMQPHLTKLIQAYPD--VRFVKCDVDE 71 (114)
T ss_dssp HHCSEEEEEEECTTCHHHHHTHHHHHHHHHHCTT--SEEEEEETTT
T ss_pred hCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC--CEEEEEECCC
Confidence 3456777778899999999999999988877653 8888888764
No 145
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=97.58 E-value=0.00015 Score=54.46 Aligned_cols=71 Identities=8% Similarity=-0.008 Sum_probs=47.9
Q ss_pred CCCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCCHHHHHHHHhhcCCCC----CCChHHHHHcC
Q 025756 95 KDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKG----DPNHSSYEALS 166 (248)
Q Consensus 95 ~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~~~~~~~f~~~~~fp~----Dp~~~~y~alG 166 (248)
+.++.+|++|...||+.|+.....|.+...++.. ++.++.|..+....+..-..-.++|- |.+..+.+..|
T Consensus 19 ~~~~~~lv~f~a~~C~~C~~~~~~~~~~~~~~~~-~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~~~~~~~~~g 93 (122)
T 3aps_A 19 QGKTHWVVDFYAPWCGPCQNFAPEFELLARMIKG-KVRAGKVDCQAYPQTCQKAGIKAYPSVKLYQYERAKKSIWE 93 (122)
T ss_dssp TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT-TCEEEEEETTTCHHHHHHTTCCSSSEEEEEEEEGGGTEEEE
T ss_pred cCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcC-CeEEEEEeCcCCHHHHHHcCCCccceEEEEeCCCccceeec
Confidence 3455677778899999999999999998888754 69999999886543322112223553 55555443333
No 146
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=97.56 E-value=0.00015 Score=52.06 Aligned_cols=43 Identities=12% Similarity=0.054 Sum_probs=35.1
Q ss_pred CCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCC
Q 025756 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS 140 (248)
Q Consensus 96 ~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~ 140 (248)
.++.+|++|...||+.|+.....|.+...++.. +.++.|..+.
T Consensus 15 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~--~~~~~v~~~~ 57 (104)
T 2e0q_A 15 SHEIAVVDFWAEWCAPCLILAPIIEELAEDYPQ--VGFGKLNSDE 57 (104)
T ss_dssp HSSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEETTT
T ss_pred cCCcEEEEEECCCChhHHHHhHHHHHHHHHcCC--ceEEEEECCC
Confidence 345677777799999999999999988877754 8888888764
No 147
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=97.55 E-value=0.00017 Score=53.12 Aligned_cols=43 Identities=16% Similarity=0.199 Sum_probs=35.3
Q ss_pred CeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCCH
Q 025756 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV 141 (248)
Q Consensus 97 ~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~~ 141 (248)
++.+|++|...||+.|+.....|.+...++. ++.++.|..+..
T Consensus 26 ~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~--~v~~~~v~~~~~ 68 (113)
T 1ti3_A 26 QKLIVVDFTASWCPPCKMIAPIFAELAKKFP--NVTFLKVDVDEL 68 (113)
T ss_dssp SSEEEEEEECSSCHHHHHHHHHHHHHHHHCS--SEEEEEEETTTC
T ss_pred CCeEEEEEECCCCHHHHHHHHHHHHHHHhCC--CcEEEEEEcccc
Confidence 5677888888999999999999988877764 788888887643
No 148
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=97.55 E-value=4.7e-05 Score=55.59 Aligned_cols=45 Identities=9% Similarity=0.044 Sum_probs=35.9
Q ss_pred CCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCCH
Q 025756 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV 141 (248)
Q Consensus 96 ~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~~ 141 (248)
+++.+|++|...||+.|+.....|.+...++.. .+.++.|..+..
T Consensus 20 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~~ 64 (109)
T 3tco_A 20 NNKLVLVDCWAEWCAPCHLYEPIYKKVAEKYKG-KAVFGRLNVDEN 64 (109)
T ss_dssp HSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TSEEEEEETTTC
T ss_pred cCCeEEEEEECCCCHHHHhhhHHHHHHHHHhCC-CceEEEEccccC
Confidence 456777788899999999999999998888753 578888876543
No 149
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=97.54 E-value=7.8e-05 Score=62.51 Aligned_cols=52 Identities=13% Similarity=0.181 Sum_probs=43.2
Q ss_pred CccCCCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCC--CEEEEEeCCCHHH
Q 025756 92 DLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASG--VALVLIGPGSVEQ 143 (248)
Q Consensus 92 ~l~~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~G--v~vV~Is~~~~~~ 143 (248)
++..+++.+|+.|+..||+.|+.....|.+...+++..+ +.++.|..+....
T Consensus 27 ~~~~~~~~v~v~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~~vd~~~~~~ 80 (241)
T 3idv_A 27 NFVADKDTVLLEFYAPWCGHCKQFAPEYEKIANILKDKDPPIPVAKIDATSASV 80 (241)
T ss_dssp HHHTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSSSCCCEEEEETTTCHH
T ss_pred HHHhcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhhcCCceEEEEEeccCCHH
Confidence 444556788889999999999999999999999998776 8888888876543
No 150
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=97.54 E-value=8.1e-05 Score=55.54 Aligned_cols=44 Identities=18% Similarity=0.067 Sum_probs=36.0
Q ss_pred CCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCC
Q 025756 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS 140 (248)
Q Consensus 96 ~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~ 140 (248)
.++.+|++|...||+.|+.....|.+..+++.. ++.++.|..+.
T Consensus 16 ~~~~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~-~v~~~~vd~~~ 59 (112)
T 2voc_A 16 SEGVVLADFWAPWCGPSKMIAPVLEELDQEMGD-KLKIVKIDVDE 59 (112)
T ss_dssp SSSEEEEEEECTTBGGGGGHHHHHHHHHHHHTT-TCEEEEEETTT
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCC-CcEEEEEECCC
Confidence 345667777789999999999999998888864 68999998765
No 151
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=97.53 E-value=0.0001 Score=58.63 Aligned_cols=48 Identities=15% Similarity=0.110 Sum_probs=39.0
Q ss_pred CCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCCHHHH
Q 025756 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQA 144 (248)
Q Consensus 96 ~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~~~~~ 144 (248)
.++.+|+.|+..||+.|+.....|.+..+++... +.++.|..+....+
T Consensus 22 ~~k~vlv~F~a~WC~~C~~~~p~l~~l~~~~~~~-~~~~~vd~d~~~~l 69 (149)
T 3gix_A 22 AEKVLVLRFGRDEDPVCLQLDDILSKTSSDLSKM-AAIYLVDVDQTAVY 69 (149)
T ss_dssp CSSEEEEEEECTTSHHHHHHHHHHHHHHTTTTTT-EEEEEEETTTCCHH
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHccCc-eEEEEEECCcCHHH
Confidence 4578888899999999999999999988887533 88888988765443
No 152
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=97.53 E-value=0.00016 Score=53.27 Aligned_cols=45 Identities=9% Similarity=0.152 Sum_probs=35.9
Q ss_pred CCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCCH
Q 025756 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV 141 (248)
Q Consensus 96 ~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~~ 141 (248)
.++.+|++|...||+.|+.....|.+...++.. .+.++.|..+..
T Consensus 24 ~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~-~v~~~~v~~~~~ 68 (115)
T 1thx_A 24 AEQPVLVYFWASWCGPCQLMSPLINLAANTYSD-RLKVVKLEIDPN 68 (115)
T ss_dssp CSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTT-TCEEEEEESTTC
T ss_pred CCceEEEEEECCCCHHHHHhHHHHHHHHHHhCC-cEEEEEEEcCCC
Confidence 445667777789999999999999988887754 388998887653
No 153
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=97.52 E-value=0.00021 Score=51.87 Aligned_cols=44 Identities=16% Similarity=0.110 Sum_probs=35.3
Q ss_pred CCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCC
Q 025756 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS 140 (248)
Q Consensus 96 ~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~ 140 (248)
+++.+|++|...||+.|+.....|.+...+++ .++.++.|..+.
T Consensus 19 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~~v~~~~ 62 (106)
T 1xwb_A 19 SGKLVVLDFFATWCGPCKMISPKLVELSTQFA-DNVVVLKVDVDE 62 (106)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHTT-TTEEEEEEETTT
T ss_pred CCCEEEEEEECCcCHHHHHhhHHHHHHHHHhC-CCeEEEEEeccc
Confidence 34566777778999999999999998887775 568888888764
No 154
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=97.52 E-value=0.00017 Score=55.84 Aligned_cols=64 Identities=9% Similarity=0.023 Sum_probs=44.4
Q ss_pred CeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCCHHHHHHHHhhcCCCC----CCChHH
Q 025756 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKG----DPNHSS 161 (248)
Q Consensus 97 ~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~~~~~~~f~~~~~fp~----Dp~~~~ 161 (248)
++.+|++|+..||+.|+.....|.+...++.. ++.++.|..+....+.+-..-.++|- |.+.+.
T Consensus 38 ~k~~lv~f~a~wC~~C~~~~~~l~~l~~~~~~-~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~~G~~ 105 (136)
T 2l5l_A 38 DKPAIVDFYADWCGPCKMVAPILDELAKEYDG-QIVIYKVDTEKEQELAGAFGIRSIPSILFIPMEGKP 105 (136)
T ss_dssp SSCEEEEEECTTSHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTCHHHHHHTTCCSSCEEEEECSSSCC
T ss_pred CCEEEEEEECCcCHHHHHHHHHHHHHHHHhcC-CEEEEEEeCCCCHHHHHHcCCCCCCEEEEECCCCcE
Confidence 45666777789999999999999988887753 59999999886543322112223663 666554
No 155
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=97.51 E-value=6.6e-05 Score=61.54 Aligned_cols=42 Identities=19% Similarity=0.314 Sum_probs=34.7
Q ss_pred CeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCC
Q 025756 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS 140 (248)
Q Consensus 97 ~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~ 140 (248)
++++|+.|+..|||+|+.+++.|.+...+.. ++.++.|..+.
T Consensus 54 ~k~vvv~F~A~WC~pC~~~~P~l~~l~~~~~--~v~~~~v~~d~ 95 (167)
T 1z6n_A 54 RRYRLLVAGEMWCPDCQINLAALDFAQRLQP--NIELAIISKGR 95 (167)
T ss_dssp SCEEEEEECCTTCHHHHHHHHHHHHHHHHCT--TEEEEEECHHH
T ss_pred CCEEEEEEECCCChhHHHHHHHHHHHHHHCC--CcEEEEEECCC
Confidence 4678888999999999999999999877653 68888887553
No 156
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=97.51 E-value=0.00017 Score=52.72 Aligned_cols=45 Identities=16% Similarity=0.123 Sum_probs=35.2
Q ss_pred CCCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCC
Q 025756 95 KDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS 140 (248)
Q Consensus 95 ~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~ 140 (248)
+.++.+|++|...||+.|+.....|.+...++.. .+.++.|..+.
T Consensus 18 ~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~ 62 (108)
T 2trx_A 18 KADGAILVDFWAEWCGPCKMIAPILDEIADEYQG-KLTVAKLNIDQ 62 (108)
T ss_dssp TCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TEEEEEEETTT
T ss_pred hcCCeEEEEEECCCCHhHHHHHHHHHHHHHHhCC-CcEEEEEECCC
Confidence 3456777788899999999999999988877753 47788777654
No 157
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=97.50 E-value=0.00016 Score=52.54 Aligned_cols=43 Identities=14% Similarity=0.176 Sum_probs=34.7
Q ss_pred CeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCCH
Q 025756 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV 141 (248)
Q Consensus 97 ~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~~ 141 (248)
++.+|++|...||+.|+.....|.+...++. ++.++.|..+..
T Consensus 20 ~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~--~~~~~~vd~~~~ 62 (105)
T 3m9j_A 20 DKLVVVDFSATWCGPCKMIKPFFHSLSEKYS--NVIFLEVDVDDC 62 (105)
T ss_dssp TSCEEEEEECTTCHHHHHHHHHHHHHHHHST--TSEEEEEETTTC
T ss_pred CCeEEEEEECCCChhhHHHHHHHHHHHHHcc--CeEEEEEEhhhh
Confidence 4566777778999999999999999887774 488888887653
No 158
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=97.49 E-value=0.00021 Score=52.46 Aligned_cols=44 Identities=11% Similarity=0.156 Sum_probs=35.7
Q ss_pred CCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCCH
Q 025756 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV 141 (248)
Q Consensus 96 ~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~~ 141 (248)
+++.+|++|...||+.|+.....|.+...++ .++.++.|..+..
T Consensus 20 ~~~~v~v~f~a~wC~~C~~~~~~~~~~~~~~--~~~~~~~vd~~~~ 63 (107)
T 1gh2_A 20 GSRLAVVKFTMRGCGPCLRIAPAFSSMSNKY--PQAVFLEVDVHQC 63 (107)
T ss_dssp TTSCEEEEEECSSCHHHHHHHHHHHHHHHHC--TTSEEEEEETTTS
T ss_pred CCCEEEEEEECCCChhhHHHHHHHHHHHHHC--CCcEEEEEECccC
Confidence 4556777888999999999999999887777 4688888887653
No 159
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=97.47 E-value=4.8e-05 Score=60.93 Aligned_cols=49 Identities=18% Similarity=0.140 Sum_probs=37.7
Q ss_pred CccCCCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCCH
Q 025756 92 DLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV 141 (248)
Q Consensus 92 ~l~~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~~ 141 (248)
++.+.++.+|++|+..||+.|+.....|.+...++.. .+.++.|..+..
T Consensus 59 ~~~~~~~~vlv~F~a~wC~~C~~~~p~l~~la~~~~~-~v~~~~vd~~~~ 107 (155)
T 2ppt_A 59 RAERDDLPLLVDFWAPWCGPCRQMAPQFQAAAATLAG-QVRLAKIDTQAH 107 (155)
T ss_dssp HHTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT-TCEEEEEETTTS
T ss_pred HHHhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHccC-CEEEEEEeCCcc
Confidence 3334455666667799999999999999998888864 488988887653
No 160
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=97.46 E-value=0.00019 Score=53.26 Aligned_cols=42 Identities=19% Similarity=0.173 Sum_probs=34.3
Q ss_pred CeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCC
Q 025756 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS 140 (248)
Q Consensus 97 ~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~ 140 (248)
++.+|++|...||+.|+.....|.+...++. ++.++.|..+.
T Consensus 28 ~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~ 69 (118)
T 2vm1_A 28 GKLVIIDFTASWCGPCRVIAPVFAEYAKKFP--GAIFLKVDVDE 69 (118)
T ss_dssp TCCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTT
T ss_pred CCEEEEEEECCCCHhHHHHhHHHHHHHHHCC--CcEEEEEEccc
Confidence 4556666778999999999999998887775 78899888764
No 161
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=97.45 E-value=0.00033 Score=53.29 Aligned_cols=46 Identities=7% Similarity=-0.192 Sum_probs=36.8
Q ss_pred CCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHH----CCCEEEEEeCCCH
Q 025756 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDA----SGVALVLIGPGSV 141 (248)
Q Consensus 96 ~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~----~Gv~vV~Is~~~~ 141 (248)
.++.+|+.|+..||+.|+.....+.+...++.. .++.++.|.++..
T Consensus 32 ~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~~~vd~~~~ 81 (127)
T 3h79_A 32 PEKDVFVLYYVPWSRHSVAAMRLWDDLSMSQSQKRNHLTFVAARIDGEKY 81 (127)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSTTTTTEEEEEEETTTC
T ss_pred CCCCEEEEEECCccHHHHHHhHHHHHHHHHHHhcccCCCeEEEEEEcccc
Confidence 356788888899999999999999998887753 3477888877754
No 162
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=97.45 E-value=0.00025 Score=54.95 Aligned_cols=44 Identities=11% Similarity=-0.010 Sum_probs=35.8
Q ss_pred CCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCCH
Q 025756 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV 141 (248)
Q Consensus 96 ~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~~ 141 (248)
.++ +|++|...||+.|+.....|.+...++.. ++.++.|..+..
T Consensus 50 ~~~-vvv~f~~~~C~~C~~~~~~l~~l~~~~~~-~v~~~~vd~~~~ 93 (140)
T 1v98_A 50 APL-TLVDFFAPWCGPCRLVSPILEELARDHAG-RLKVVKVNVDEH 93 (140)
T ss_dssp CCE-EEEEEECTTCHHHHHHHHHHHHHHHHTTT-TEEEEEEETTTC
T ss_pred CCC-EEEEEECCCCHHHHHHHHHHHHHHHHccC-ceEEEEEECCCC
Confidence 445 77788899999999999999998888754 588888887653
No 163
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=97.43 E-value=0.0002 Score=53.50 Aligned_cols=42 Identities=17% Similarity=0.136 Sum_probs=34.1
Q ss_pred CCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCC
Q 025756 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS 140 (248)
Q Consensus 96 ~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~ 140 (248)
+++.+|++|...||+.|+.....|.+...++ ++.++.|..+.
T Consensus 32 ~~~~~vv~f~a~wC~~C~~~~~~~~~~~~~~---~~~~~~vd~~~ 73 (117)
T 2xc2_A 32 KNKLVVVDFFATWCGPCKTIAPLFKELSEKY---DAIFVKVDVDK 73 (117)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHTTS---SSEEEEEETTT
T ss_pred CCCEEEEEEECCCCHhHHHHhHHHHHHHHHc---CcEEEEEECCc
Confidence 3456677777899999999999998877766 78888888764
No 164
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=97.43 E-value=0.00029 Score=51.63 Aligned_cols=45 Identities=13% Similarity=0.239 Sum_probs=35.7
Q ss_pred CCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCCH
Q 025756 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV 141 (248)
Q Consensus 96 ~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~~ 141 (248)
.++.+|++|...||+.|+.....|.+...++.. .+.++.|..+..
T Consensus 21 ~~~~vlv~f~a~~C~~C~~~~~~~~~~~~~~~~-~v~~~~vd~~~~ 65 (111)
T 3gnj_A 21 EGKACLVMFSRKNCHVCQKVTPVLEELRLNYEE-SFGFYYVDVEEE 65 (111)
T ss_dssp SCCCEEEEEECSSCHHHHHHHHHHHHHHHHTTT-TSEEEEEETTTC
T ss_pred cCCEEEEEEeCCCChhHHHHHHHHHHHHHHcCC-ceEEEEEECCcC
Confidence 445667777789999999999999988877753 588888887654
No 165
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=97.41 E-value=7.4e-05 Score=60.03 Aligned_cols=46 Identities=20% Similarity=0.320 Sum_probs=32.7
Q ss_pred CCeEEEEEEcCCCChhhHHHHHHH---HhcHHHHHHCCCEEEEEeCCCHH
Q 025756 96 DRKAVVAFARHFGCVLCRKRADYL---AAKKDVMDASGVALVLIGPGSVE 142 (248)
Q Consensus 96 ~~~vvlvF~R~~~Cp~C~~~l~~L---~~~~~~l~~~Gv~vV~Is~~~~~ 142 (248)
++++||+.|+..||++|+.....+ .+....+++ ++.+|.|..++..
T Consensus 46 ~gk~vlv~F~A~WC~~C~~~~~~~~~~~~~~~~~~~-~~~~v~v~~d~~~ 94 (172)
T 3f9u_A 46 HNKPVMLDFTGYGCVNCRKMELAVWTDPKVSSIINN-DYVLITLYVDNKT 94 (172)
T ss_dssp TTCCEEEEEECTTCHHHHHHHHHTTTSHHHHHHHHH-HCEEEEEETTCCC
T ss_pred cCCeEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcC-CEEEEEEecCccc
Confidence 367889999999999999864433 333333433 7999999987643
No 166
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=97.39 E-value=0.00033 Score=52.27 Aligned_cols=45 Identities=13% Similarity=0.095 Sum_probs=35.5
Q ss_pred CCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCCH
Q 025756 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV 141 (248)
Q Consensus 96 ~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~~ 141 (248)
.++.+|++|...||+.|+.....|.+...++.. ++.++.|..+..
T Consensus 29 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~~ 73 (121)
T 2i1u_A 29 SNKPVLVDFWATWCGPCKMVAPVLEEIATERAT-DLTVAKLDVDTN 73 (121)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTC
T ss_pred CCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcC-CeEEEEEECCCC
Confidence 345566777789999999999999888877753 588898887653
No 167
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=96.49 E-value=2.5e-05 Score=56.50 Aligned_cols=44 Identities=18% Similarity=0.155 Sum_probs=33.0
Q ss_pred CCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCC
Q 025756 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS 140 (248)
Q Consensus 96 ~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~ 140 (248)
.++.+|++|...||+.|+.....+.+...++.. ++.++.|..+.
T Consensus 18 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~ 61 (106)
T 2yj7_A 18 SDKPVLVDFWAPWCGPCRMIAPIIEELAKEYEG-KVKVVKVNVDE 61 (106)
Confidence 345666677799999999999999888777753 46666666554
No 168
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=97.37 E-value=0.00022 Score=52.21 Aligned_cols=45 Identities=11% Similarity=-0.011 Sum_probs=34.8
Q ss_pred CeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHC--CCEEEEEeCCCH
Q 025756 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDAS--GVALVLIGPGSV 141 (248)
Q Consensus 97 ~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~--Gv~vV~Is~~~~ 141 (248)
++.+|++|+..||+.|+.....|.+...++... ++.++.|..+..
T Consensus 21 ~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~ 67 (111)
T 3uvt_A 21 EGITFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTAE 67 (111)
T ss_dssp SSEEEEEEECSSCHHHHHHHHHHHHHHTCCCCC-CCEEEEEEETTTC
T ss_pred CCcEEEEEECCCChhHHHhhHHHHHHHHHhhccCCceEEEEEecccc
Confidence 346677888999999999999999887776433 677777876643
No 169
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.36 E-value=0.00011 Score=56.78 Aligned_cols=44 Identities=11% Similarity=-0.022 Sum_probs=37.2
Q ss_pred eEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCCH
Q 025756 98 KAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV 141 (248)
Q Consensus 98 ~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~~ 141 (248)
..+|++|+..||+.|+.....|.+...+++..++.++.|..+..
T Consensus 27 ~~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~v~~~~vd~~~~ 70 (137)
T 2dj0_A 27 VTWIVEFFANWSNDCQSFAPIYADLSLKYNCTGLNFGKVDVGRY 70 (137)
T ss_dssp SCEEEEECCTTCSTTTTTHHHHHHHHHHHCSSSCEEEECCTTTC
T ss_pred CEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCCeEEEEEeCccC
Confidence 36777888999999999999999998888766788888887654
No 170
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=97.36 E-value=0.00014 Score=56.10 Aligned_cols=45 Identities=13% Similarity=0.042 Sum_probs=36.6
Q ss_pred CCCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCC
Q 025756 95 KDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS 140 (248)
Q Consensus 95 ~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~ 140 (248)
+.++.+|++|+..||+.|+.....|.+...++.. ++.++.|..+.
T Consensus 38 ~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~-~v~~~~vd~~~ 82 (128)
T 2o8v_B 38 KADGAILVDFWAEWCGPAKMIAPILDEIADEYQG-KLTVAKLNIDQ 82 (128)
T ss_dssp TCSSEEEEEEECSSCHHHHHTHHHHHHHHHHTTT-TEEEEEEETTT
T ss_pred hcCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcC-CeEEEEEECCC
Confidence 3456788888899999999999999988877753 48888888664
No 171
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=97.35 E-value=0.0003 Score=54.71 Aligned_cols=47 Identities=15% Similarity=0.222 Sum_probs=38.3
Q ss_pred CCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCCHHH
Q 025756 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQ 143 (248)
Q Consensus 96 ~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~~~~ 143 (248)
.++.+|++|...||+.|+.....|.+...++.. .+.++.|..+....
T Consensus 23 ~~~~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~-~v~~~~vd~~~~~~ 69 (140)
T 3hz4_A 23 SKKPVVVMFYSPACPYCKAMEPYFEEYAKEYGS-SAVFGRINIATNPW 69 (140)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT-TSEEEEEETTTCHH
T ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhCC-ceEEEEEECCcCHh
Confidence 455667777899999999999999998888864 49999999876543
No 172
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=97.32 E-value=7.9e-05 Score=64.69 Aligned_cols=45 Identities=9% Similarity=0.062 Sum_probs=38.2
Q ss_pred CeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCCHH
Q 025756 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVE 142 (248)
Q Consensus 97 ~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~~~ 142 (248)
++.||+.|+..||++|+.....|.+...++.. .+.++.|..+...
T Consensus 26 ~~~v~v~f~a~wC~~C~~~~p~~~~~~~~~~~-~~~~~~vd~~~~~ 70 (287)
T 3qou_A 26 TTPVLFYFWSERSQHCLQLTPILESLAAQYNG-QFILAKLDCDAEQ 70 (287)
T ss_dssp TSCEEEEEECTTCTTTTTTHHHHHHHHHHHTS-SSEEEEEETTTCH
T ss_pred CCeEEEEEECCCChHHHHHHHHHHHHHHHcCC-CeEEEEEeCccCH
Confidence 56788888899999999999999998888763 4999999988653
No 173
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=97.31 E-value=0.00016 Score=54.31 Aligned_cols=43 Identities=19% Similarity=0.268 Sum_probs=33.1
Q ss_pred CCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCCH
Q 025756 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV 141 (248)
Q Consensus 96 ~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~~ 141 (248)
.++.+|++|+..||++|+.....|.+...++ +..++.|..+..
T Consensus 28 ~~~~~~v~f~a~wC~~C~~~~p~l~~~~~~~---~~~v~~~~~~~~ 70 (118)
T 1zma_A 28 KKETATFFIGRKTCPYCRKFAGTLSGVVAET---KAHIYFINSEEP 70 (118)
T ss_dssp TTCCEEEEEECTTCHHHHHHHHHHHHHHHHH---CCCCEEEETTCG
T ss_pred CCCeEEEEEECCCCccHHHHHHHHHHHHHhc---CCeEEEEECCCc
Confidence 4456778888999999999999998877655 356777766653
No 174
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=97.28 E-value=0.00044 Score=54.66 Aligned_cols=44 Identities=14% Similarity=0.150 Sum_probs=36.6
Q ss_pred CeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCCHH
Q 025756 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVE 142 (248)
Q Consensus 97 ~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~~~ 142 (248)
++.+|++|+..||+.|+.....|.+...++ .++.++.|..+...
T Consensus 32 ~~~vvv~F~a~wC~~C~~~~p~l~~l~~~~--~~v~~~~vd~~~~~ 75 (153)
T 2wz9_A 32 KSLLVVHFWAPWAPQCAQMNEVMAELAKEL--PQVSFVKLEAEGVP 75 (153)
T ss_dssp TSCEEEEEECTTCHHHHHHHHHHHHHHHHC--TTSEEEEEETTTSH
T ss_pred CCeEEEEEECCCCHhHHHHHHHHHHHHHHc--CCeEEEEEECCCCH
Confidence 456777778999999999999999887776 47999999988654
No 175
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=97.28 E-value=0.00029 Score=54.57 Aligned_cols=41 Identities=22% Similarity=0.259 Sum_probs=32.6
Q ss_pred CeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCC
Q 025756 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS 140 (248)
Q Consensus 97 ~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~ 140 (248)
++.+|++|+..||+.|+.....|.+...++ ++.++.|..+.
T Consensus 40 ~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~---~v~~~~vd~~~ 80 (133)
T 3cxg_A 40 NSSIVIKFGAVWCKPCNKIKEYFKNQLNYY---YVTLVDIDVDI 80 (133)
T ss_dssp CSEEEEEEECTTCHHHHHTHHHHHGGGGTE---ECEEEEEETTT
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHhc---CEEEEEEeccc
Confidence 457888889999999999999888876655 57777777554
No 176
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=97.27 E-value=0.00038 Score=53.52 Aligned_cols=46 Identities=11% Similarity=0.119 Sum_probs=36.7
Q ss_pred cCCCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCCH
Q 025756 94 WKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV 141 (248)
Q Consensus 94 ~~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~~ 141 (248)
...++.+|++|...||+.|+.....|.+...++ .++.++.|..+..
T Consensus 34 ~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~--~~v~~~~vd~d~~ 79 (125)
T 1r26_A 34 MSEDILTVAWFTAVWCGPCKTIERPMEKIAYEF--PTVKFAKVDADNN 79 (125)
T ss_dssp HHSSSCEEEEEECTTCHHHHHTHHHHHHHHHHC--TTSEEEEEETTTC
T ss_pred HccCCEEEEEEECCcCHhHHHHHHHHHHHHHHC--CCCEEEEEECCCC
Confidence 344556777778999999999999999988777 3699999988653
No 177
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=97.25 E-value=0.00057 Score=58.13 Aligned_cols=44 Identities=18% Similarity=0.052 Sum_probs=38.5
Q ss_pred CCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHH--CCCEEEEEeCC
Q 025756 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDA--SGVALVLIGPG 139 (248)
Q Consensus 96 ~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~--~Gv~vV~Is~~ 139 (248)
.++.+|+.|+..||+.|+.....+.+...+++. .++.++.|.++
T Consensus 29 ~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~ 74 (244)
T 3q6o_A 29 SRSAWAVEFFASWCGHCIAFAPTWXALAEDVKAWRPALYLAALDCA 74 (244)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHHTGGGTTTEEEEEEETT
T ss_pred CCCeEEEEEECCcCHHHHHHHHHHHHHHHHHHhccCcEEEEEEeCC
Confidence 346888888999999999999999999999876 57999999984
No 178
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=97.22 E-value=0.00031 Score=54.40 Aligned_cols=40 Identities=20% Similarity=0.267 Sum_probs=33.5
Q ss_pred EEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCCH
Q 025756 99 AVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV 141 (248)
Q Consensus 99 vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~~ 141 (248)
.+|++|+..||+.|+.....|.+...++. +.++.|..++.
T Consensus 33 ~vlv~F~a~wC~~C~~~~p~l~~l~~~~~---v~~~~vd~~~~ 72 (135)
T 3emx_A 33 DAILAVYSKTCPHCHRDWPQLIQASKEVD---VPIVMFIWGSL 72 (135)
T ss_dssp SEEEEEEETTCHHHHHHHHHHHHHHTTCC---SCEEEEEECTT
T ss_pred cEEEEEECCcCHhhhHhChhHHHHHHHCC---CEEEEEECCCc
Confidence 67777889999999999999988877764 88999988553
No 179
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=97.18 E-value=0.00072 Score=50.72 Aligned_cols=41 Identities=22% Similarity=0.182 Sum_probs=31.1
Q ss_pred CeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCC
Q 025756 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG 139 (248)
Q Consensus 97 ~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~ 139 (248)
++.||+.|+..||++|+.....+.+...++. ++.++-|..+
T Consensus 20 ~k~vvv~F~a~wC~~C~~~~p~~~~~~~~~~--~~~~~~vd~d 60 (105)
T 3zzx_A 20 NKLVVIDFYATWCGPCKMIAPKLEELSQSMS--DVVFLKVDVD 60 (105)
T ss_dssp TSEEEEEEECTTCHHHHHHHHHHHHHHHHCT--TEEEEEEETT
T ss_pred CCEEEEEEECCCCCCccCCCcchhhhhhccC--CeEEEEEecc
Confidence 4678888899999999999999888766553 4556655543
No 180
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=97.17 E-value=0.00061 Score=53.64 Aligned_cols=44 Identities=18% Similarity=0.099 Sum_probs=36.6
Q ss_pred CeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCCH
Q 025756 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV 141 (248)
Q Consensus 97 ~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~~ 141 (248)
++.+|+.|+..||+.|+.....|.+..++++. .+.++.|..+..
T Consensus 23 ~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~-~v~~~~vd~d~~ 66 (142)
T 1qgv_A 23 DRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKN-FAVIYLVDITEV 66 (142)
T ss_dssp SSEEEEEEECTTSHHHHHHHHHHHHHHHHHTT-TEEEEEEETTTC
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHHhCC-CeEEEEEccccC
Confidence 56778888999999999999999998888743 488888887753
No 181
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=97.16 E-value=0.00023 Score=53.02 Aligned_cols=43 Identities=14% Similarity=0.184 Sum_probs=33.1
Q ss_pred CCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCC
Q 025756 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS 140 (248)
Q Consensus 96 ~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~ 140 (248)
+.+.+|++|...||+.|+.....|.+...++. ++.++.|..+.
T Consensus 18 ~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~--~v~~~~vd~~~ 60 (110)
T 2l6c_A 18 GLSDAIVFFHKNLCPHCKNMEKVLDKFGARAP--QVAISSVDSEA 60 (110)
T ss_dssp TCSEEEEEEECSSCSTHHHHHHHHHHHHTTCT--TSCEEEEEGGG
T ss_pred cCCCEEEEEECCCCHhHHHHHHHHHHHHHHCC--CcEEEEEcCcC
Confidence 34556777788999999999999988776653 67888887654
No 182
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=97.14 E-value=0.00031 Score=59.15 Aligned_cols=48 Identities=15% Similarity=0.092 Sum_probs=38.9
Q ss_pred cCCCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCCHH
Q 025756 94 WKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVE 142 (248)
Q Consensus 94 ~~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~~~ 142 (248)
.+.++.+|+.|+..||+.|+.....|.+...++.. .+.++.|..+...
T Consensus 27 ~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~-~v~~~~vd~d~~~ 74 (222)
T 3dxb_A 27 LKADGAILVDFWAEWCGPCKMIAPILDEIADEYQG-KLTVAKLNIDQNP 74 (222)
T ss_dssp TTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTCT
T ss_pred HhcCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcC-CcEEEEEECCCCH
Confidence 33456777777899999999999999999888864 3899999988653
No 183
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=97.14 E-value=0.0001 Score=61.55 Aligned_cols=46 Identities=13% Similarity=0.088 Sum_probs=37.7
Q ss_pred CCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCCHH
Q 025756 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVE 142 (248)
Q Consensus 96 ~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~~~ 142 (248)
.++.+|+.|+..||+.|+.....+.+...++.. .+.++.|..+...
T Consensus 113 ~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~-~v~~~~vd~~~~~ 158 (210)
T 3apq_A 113 SGELWFVNFYSPGCSHCHDLAPTWREFAKEVDG-LLRIGAVNCGDDR 158 (210)
T ss_dssp HSCCEEEEEECTTCHHHHHHHHHHHHHHHHTBT-TBEEEEEETTTCH
T ss_pred cCCcEEEEEeCCCChhHHHHHHHHHHHHHHhcC-ceEEEEEECCccH
Confidence 356778888899999999999999998888753 4889999887653
No 184
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=97.06 E-value=0.00069 Score=51.52 Aligned_cols=61 Identities=16% Similarity=0.272 Sum_probs=44.1
Q ss_pred CeEEEEEEcCC-------CChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCCHHHHHHHHhhcCCCCCCChHHHHHcCCc
Q 025756 97 RKAVVAFARHF-------GCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKGDPNHSSYEALSFV 168 (248)
Q Consensus 97 ~~vvlvF~R~~-------~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~~~~~~~f~~~~~fp~Dp~~~~y~alGl~ 168 (248)
++.+|+.|+.. ||+.|+.....|.+...++.. ++.++.|..++... |. |++..+.+.||+.
T Consensus 24 ~~~v~v~F~a~~~~~~~~wC~~C~~~~p~l~~~~~~~~~-~~~~~~vd~~~~~~---~~-------d~~~~~~~~~~i~ 91 (123)
T 1wou_A 24 GKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISE-GCVFIYCQVGEKPY---WK-------DPNNDFRKNLKVT 91 (123)
T ss_dssp TSEEEEEEECCBCTTCCBSCHHHHHHHHHHHHHGGGCCT-TEEEEEEECCCHHH---HH-------CTTCHHHHHHCCC
T ss_pred CCEEEEEEEccCCCCCCCcCHHHHHhhHHHHHHHHHcCC-CcEEEEEECCCchh---hh-------chhHHHHHHCCCC
Confidence 46777778888 999999999999988777643 78899998875321 10 4455566666664
No 185
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=97.03 E-value=8.1e-05 Score=55.12 Aligned_cols=47 Identities=15% Similarity=0.116 Sum_probs=36.2
Q ss_pred cCCCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHC--CCEEEEEeCCC
Q 025756 94 WKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDAS--GVALVLIGPGS 140 (248)
Q Consensus 94 ~~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~--Gv~vV~Is~~~ 140 (248)
.++++.+|++|...||+.|+.....|.+...+++.. ++.++.|..+.
T Consensus 21 ~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~ 69 (120)
T 1mek_A 21 LAAHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATE 69 (120)
T ss_dssp HHHCSEEEEEEECSSCSTTSTTHHHHHHHHHTTTTTCCCCBCEEEETTT
T ss_pred HccCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCcEEEEEEcCCC
Confidence 334567788888999999999999999988888754 46666666554
No 186
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=97.02 E-value=0.0032 Score=51.96 Aligned_cols=36 Identities=11% Similarity=0.080 Sum_probs=26.0
Q ss_pred eceEEEEeCCCCeEEEEEe---CCCCCCCCCHHHHHHHhh
Q 025756 211 QGGIIVAGPGKSNISYIHR---DKEAGDDPDIQDILKACC 247 (248)
Q Consensus 211 lgG~fVvd~gg~~I~~~h~---~~~~~Dh~~i~eIL~al~ 247 (248)
.|..++++++| ++.|... .....+.+.+.++|+.+.
T Consensus 105 ~Pt~v~l~~dG-~~v~~~ty~p~~~~~~~~~f~~~L~~v~ 143 (173)
T 3ira_A 105 WPLNIIMTPGK-KPFFAGTYIPKNTRFNQIGMLELVPRIK 143 (173)
T ss_dssp SSEEEEECTTS-CEEEEESSCCSSCBTTBCCHHHHHHHHH
T ss_pred CcceeeECCCC-CceeeeeeCCCCcCCCCCCHHHHHHHHH
Confidence 56799999998 8888742 223346788988888764
No 187
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=96.87 E-value=0.0017 Score=53.88 Aligned_cols=45 Identities=7% Similarity=-0.034 Sum_probs=36.9
Q ss_pred CCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHH---CCCEEEEEeCCC
Q 025756 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDA---SGVALVLIGPGS 140 (248)
Q Consensus 96 ~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~---~Gv~vV~Is~~~ 140 (248)
+++++|+.|+..||++|+.....+.+...++.. .++.++.|..+.
T Consensus 133 ~~~~~~v~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~~v~~~~vd~~~ 180 (226)
T 1a8l_A 133 DQDVRILVFVTPTCPYCPLAVRMAHKFAIENTKAGKGKILGDMVEAIE 180 (226)
T ss_dssp CSCEEEEEEECSSCTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEEGGG
T ss_pred CCCcEEEEEeCCCCCccHHHHHHHHHHHHhcccccCCcEEEEEEEccc
Confidence 457768888899999999999999998888874 368888887653
No 188
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=96.84 E-value=0.0003 Score=49.11 Aligned_cols=42 Identities=14% Similarity=0.157 Sum_probs=34.2
Q ss_pred eEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCC
Q 025756 98 KAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS 140 (248)
Q Consensus 98 ~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~ 140 (248)
.+.|++|...||+.|++....|.+...++. .++.++.|..+.
T Consensus 3 ~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~~vd~~~ 44 (85)
T 1fo5_A 3 KVKIELFTSPMCPHCPAAKRVVEEVANEMP-DAVEVEYINVME 44 (85)
T ss_dssp CEEEEEEECCCSSCCCTHHHHHHHHHHHCS-SSEEEEEEESSS
T ss_pred ceEEEEEeCCCCCchHHHHHHHHHHHHHcC-CceEEEEEECCC
Confidence 356778889999999999999988777764 468888888764
No 189
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=96.84 E-value=0.0015 Score=57.83 Aligned_cols=44 Identities=11% Similarity=0.095 Sum_probs=37.4
Q ss_pred CCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCC
Q 025756 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS 140 (248)
Q Consensus 96 ~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~ 140 (248)
.++.+|+.|+..||+.|+.....|.+...++... +.++.|.++.
T Consensus 34 ~~~~vlV~F~A~wC~~C~~~~p~~~~la~~~~~~-~~~~~v~~d~ 77 (298)
T 3ed3_A 34 TNYTSLVEFYAPWCGHCKKLSSTFRKAAKRLDGV-VQVAAVNCDL 77 (298)
T ss_dssp SSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-SEEEEEETTS
T ss_pred CCCeEEEEEECCCCHHHHHHHHHHHHHHHHccCC-cEEEEEEccC
Confidence 3566778888999999999999999999888643 8999999883
No 190
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=96.79 E-value=0.002 Score=51.60 Aligned_cols=49 Identities=20% Similarity=0.251 Sum_probs=36.4
Q ss_pred CCeEeCCCccCCCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEe
Q 025756 85 GNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIG 137 (248)
Q Consensus 85 G~~v~l~~l~~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is 137 (248)
++.+.+++- +.+++|+.|..+|||+|+.....|.+...+.. +++++.+.
T Consensus 12 ~~~~~~G~~--~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~--~v~~~~~~ 60 (175)
T 3gyk_A 12 PNAPVLGNP--EGDVTVVEFFDYNCPYCRRAMAEVQGLVDADP--NVRLVYRE 60 (175)
T ss_dssp TTSCEEECT--TCSEEEEEEECTTCHHHHHHHHHHHHHHHHCT--TEEEEEEE
T ss_pred CCCCCcCCC--CCCEEEEEEECCCCccHHHHHHHHHHHHHhCC--CEEEEEEe
Confidence 444556663 56899999999999999999999988766543 25665554
No 191
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=96.77 E-value=0.0002 Score=54.15 Aligned_cols=44 Identities=18% Similarity=0.193 Sum_probs=35.6
Q ss_pred CeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCCHH
Q 025756 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVE 142 (248)
Q Consensus 97 ~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~~~ 142 (248)
++.+|++|+..||+.|+.....|.+...++. ++.++.|..+...
T Consensus 36 ~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~--~v~~~~v~~~~~~ 79 (130)
T 1wmj_A 36 GKVVIIDFTASWCGPCRFIAPVFAEYAKKFP--GAVFLKVDVDELK 79 (130)
T ss_dssp TCBCBEECCSSSCSCSSSSHHHHHHHHHHCT--TBCCEECCTTTSG
T ss_pred CCEEEEEEECCCChhHHHHHHHHHHHHHHCC--CCEEEEEeccchH
Confidence 4566777779999999999999998877774 7888888877543
No 192
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=96.77 E-value=0.0011 Score=62.32 Aligned_cols=51 Identities=14% Similarity=0.113 Sum_probs=43.4
Q ss_pred ccCCCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCCHHH
Q 025756 93 LWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQ 143 (248)
Q Consensus 93 l~~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~~~~ 143 (248)
+.+.++.+|+.|...||+.|+.....+.+...+++..++.++.|.++....
T Consensus 27 ~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~~v~~~~vd~~~~~~ 77 (504)
T 2b5e_A 27 YIQSHDLVLAEFFAPWCGHCKNMAPEYVKAAETLVEKNITLAQIDCTENQD 77 (504)
T ss_dssp HHTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTTCEEEEEETTTCHH
T ss_pred HHhcCCeEEEEEECCCCHHHHHhHHHHHHHHHHhccCCeEEEEEECCCCHH
Confidence 445567888888999999999999999999999877789999999887643
No 193
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=96.73 E-value=0.0023 Score=49.58 Aligned_cols=42 Identities=14% Similarity=0.008 Sum_probs=34.3
Q ss_pred eEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCCH
Q 025756 98 KAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV 141 (248)
Q Consensus 98 ~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~~ 141 (248)
+.+|+.|+..||+.|+.....|.+...++ .++.++.|..+..
T Consensus 31 ~~vvv~f~a~wC~~C~~~~p~l~~la~~~--~~v~~~~vd~~~~ 72 (135)
T 2dbc_A 31 LWVVIHLYRSSVPMCLVVNQHLSVLARKF--PETKFVKAIVNSC 72 (135)
T ss_dssp CEEEEEECCTTCHHHHHHHHHHHHHHHHC--SSEEEEEECCSSS
T ss_pred CEEEEEEECCCChHHHHHHHHHHHHHHHC--CCcEEEEEEhhcC
Confidence 57888889999999999999999887766 3577888876653
No 194
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=96.72 E-value=0.00046 Score=48.14 Aligned_cols=41 Identities=10% Similarity=0.118 Sum_probs=33.1
Q ss_pred EEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCC
Q 025756 99 AVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS 140 (248)
Q Consensus 99 vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~ 140 (248)
+.|++|...||+.|+.....|.+...++. .++.++.|..+.
T Consensus 3 ~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~~vd~~~ 43 (85)
T 1nho_A 3 VNIEVFTSPTCPYCPMAIEVVDEAKKEFG-DKIDVEKIDIMV 43 (85)
T ss_dssp CCEEEESCSSSCCSTTHHHHHHHHHHHHC-SSCCEEEECTTT
T ss_pred EEEEEEECCCCcchHHHHHHHHHHHHHhc-CCeEEEEEECCC
Confidence 35778889999999999999988877764 368888887764
No 195
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=96.57 E-value=0.0042 Score=53.26 Aligned_cols=47 Identities=4% Similarity=-0.135 Sum_probs=38.3
Q ss_pred CCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHH---CCCEEEEEeCCCHH
Q 025756 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDA---SGVALVLIGPGSVE 142 (248)
Q Consensus 96 ~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~---~Gv~vV~Is~~~~~ 142 (248)
+++++|+.|+..||++|+..++.|.+...++.. .++.+..|..+...
T Consensus 137 ~~~~~vv~F~a~wC~~C~~~~p~l~~la~~~~~~~~~~v~~~~vd~~~~~ 186 (243)
T 2hls_A 137 KGRVHIETIITPSCPYCPYAVLLAHMFAYEAWKQGNPVILSEAVEAYENP 186 (243)
T ss_dssp CSCEEEEEEECSSCSSHHHHHHHHHHHHHHHHHTTCCCEEEEEEETTTCH
T ss_pred CCCcEEEEEECCCCCCcHHHHHHHHHHHHHcccccCCcEEEEEEECccCH
Confidence 357888889999999999999999998888742 57888888776543
No 196
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=96.57 E-value=0.00081 Score=56.18 Aligned_cols=49 Identities=12% Similarity=0.139 Sum_probs=39.2
Q ss_pred ccCCCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCC--CEEEEEeCCCH
Q 025756 93 LWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASG--VALVLIGPGSV 141 (248)
Q Consensus 93 l~~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~G--v~vV~Is~~~~ 141 (248)
+..+++.+|++|...||+.|+.....+.+...++...+ +.++.|..+..
T Consensus 143 ~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~a~~~~~~~~~v~~~~vd~~~~ 193 (241)
T 3idv_A 143 VVNDADIILVEFYAPWCGHCKKLAPEYEKAAKELSKRSPPIPLAKVDATAE 193 (241)
T ss_dssp HHHHCSEEEEEEECTTCTGGGGTHHHHHHHHHHHHTSSSCCCEEEEETTTC
T ss_pred hhccCCeEEEEEECCCCHHHHHhHHHHHHHHHHHhccCCcEEEEEEECCCC
Confidence 33345678888889999999999999999988887654 78888877654
No 197
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=96.53 E-value=0.003 Score=53.08 Aligned_cols=38 Identities=18% Similarity=0.394 Sum_probs=30.7
Q ss_pred CCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEe
Q 025756 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIG 137 (248)
Q Consensus 96 ~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is 137 (248)
+++++|+.|..+|||+|++....|.+..+ .|++++.+.
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~l~~----~~v~v~~~~ 122 (216)
T 1eej_A 85 QEKHVITVFTDITCGYCHKLHEQMADYNA----LGITVRYLA 122 (216)
T ss_dssp TCCEEEEEEECTTCHHHHHHHTTHHHHHH----TTEEEEEEE
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHh----CCcEEEEEE
Confidence 45788889999999999999998876543 488888774
No 198
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=95.47 E-value=0.00046 Score=52.39 Aligned_cols=52 Identities=10% Similarity=0.330 Sum_probs=36.0
Q ss_pred CCeEeCCCccCCCeEEEEEEcCCCChhhHHHHHHH---HhcHHHHHHCCCEEEEEeCC
Q 025756 85 GNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYL---AAKKDVMDASGVALVLIGPG 139 (248)
Q Consensus 85 G~~v~l~~l~~~~~vvlvF~R~~~Cp~C~~~l~~L---~~~~~~l~~~Gv~vV~Is~~ 139 (248)
.+.+.+... .++.+|++|...||+.|+.....| .+....+.. ++.++.|..+
T Consensus 9 ~~~~~~~~~--~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~-~~~~~~vd~~ 63 (130)
T 2lst_A 9 PEALALAQA--HGRMVMVYFHSEHCPYCQQMNTFVLSDPGVSRLLEA-RFVVASVSVD 63 (130)
Confidence 445555543 345677778899999999999888 565555543 5777777764
No 199
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=96.44 E-value=0.0051 Score=58.44 Aligned_cols=45 Identities=16% Similarity=0.210 Sum_probs=37.8
Q ss_pred eEEEEEEcCCCChhhHHHHHHHHhcHHHHHHC-C------CEEEEEeCCCHH
Q 025756 98 KAVVAFARHFGCVLCRKRADYLAAKKDVMDAS-G------VALVLIGPGSVE 142 (248)
Q Consensus 98 ~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~-G------v~vV~Is~~~~~ 142 (248)
+++|+.|+..||+.|+.....+.+...++... | +.++.|..+...
T Consensus 43 k~VlV~FyA~WC~pCk~~~P~l~~la~~~~~~~g~~~~~~v~f~~VD~d~~~ 94 (470)
T 3qcp_A 43 CPWIVLFYNDGCGACRRYASTFSKFAGGLKVEHGKDALQIATAAAVNCASEV 94 (470)
T ss_dssp SCEEEEEECTTCHHHHHHHHHHHHHHHTSCCSSCSSGGGGCEEEEEETTTCH
T ss_pred CeEEEEEECCCCHHHHHHHHHHHHHHHHHhhhcccccCceEEEEEEECCCCH
Confidence 46788888999999999999999998888643 3 899999988653
No 200
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=96.40 E-value=0.0012 Score=59.28 Aligned_cols=50 Identities=8% Similarity=0.140 Sum_probs=38.9
Q ss_pred ccCCCeEEEEEEcCCCChhhHHHHHH-------HHhcHHHHHHCCCEEEEEeCCCHHH
Q 025756 93 LWKDRKAVVAFARHFGCVLCRKRADY-------LAAKKDVMDASGVALVLIGPGSVEQ 143 (248)
Q Consensus 93 l~~~~~vvlvF~R~~~Cp~C~~~l~~-------L~~~~~~l~~~Gv~vV~Is~~~~~~ 143 (248)
...+.+.+|+.|+..||+ |+..++. +.+...+++..++.++.|.++....
T Consensus 24 ~i~~~~~~lV~F~a~wC~-c~~~~p~~~~~~~~~~~~a~~~~~~~v~~~~Vd~~~~~~ 80 (350)
T 1sji_A 24 VLKKYDVLCLYYHESVSS-DKVAQKQFQLKEIVLELVAQVLEHKDIGFVMVDAKKEAK 80 (350)
T ss_dssp HHTTCSEEEEEEECCSCS-SSTTSHHHHHHHHHHHHHHHHGGGSSEEEEEEETTTTHH
T ss_pred HHhhCCeEEEEEECCCCc-chhhCchhhhhhHHHHHHHHHHhhcCcEEEEEeCCCCHH
Confidence 344557888888999999 9877777 6777777776689999999887543
No 201
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=96.40 E-value=0.0042 Score=51.80 Aligned_cols=44 Identities=11% Similarity=-0.028 Sum_probs=36.1
Q ss_pred CCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCCH
Q 025756 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV 141 (248)
Q Consensus 96 ~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~~ 141 (248)
+++++|+.|...||+.|+.....+.+...++ .++.++.|..+..
T Consensus 135 ~~~~~~v~F~a~wC~~C~~~~~~~~~~~~~~--~~v~~~~vd~~~~ 178 (229)
T 2ywm_A 135 DIPIEIWVFVTTSCGYCPSAAVMAWDFALAN--DYITSKVIDASEN 178 (229)
T ss_dssp CSCEEEEEEECTTCTTHHHHHHHHHHHHHHC--TTEEEEEEEGGGC
T ss_pred CCCeEEEEEECCCCcchHHHHHHHHHHHHHC--CCeEEEEEECCCC
Confidence 4678788889999999999999998887776 3788888877643
No 202
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=96.40 E-value=0.0048 Score=42.18 Aligned_cols=36 Identities=11% Similarity=0.088 Sum_probs=26.0
Q ss_pred EEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEe
Q 025756 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIG 137 (248)
Q Consensus 101 lvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is 137 (248)
.+.|+..||+.|+.....|.+...++. ..+.++.|.
T Consensus 3 ~v~f~a~wC~~C~~~~~~l~~~~~~~~-~~~~~~~v~ 38 (77)
T 1ilo_A 3 KIQIYGTGCANCQMLEKNAREAVKELG-IDAEFEKIK 38 (77)
T ss_dssp EEEEECSSSSTTHHHHHHHHHHHHHTT-CCEEEEEEC
T ss_pred EEEEEcCCChhHHHHHHHHHHHHHHcC-CceEEEEec
Confidence 345566799999999999988776654 245555554
No 203
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=96.39 E-value=0.0053 Score=50.24 Aligned_cols=45 Identities=20% Similarity=0.094 Sum_probs=36.1
Q ss_pred CCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCCH
Q 025756 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV 141 (248)
Q Consensus 96 ~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~~ 141 (248)
..+.||+-|++.||++|+...+-|.++.+++.. .+.++-|..|..
T Consensus 40 ~~k~VVVdF~A~WCgPCk~m~PvleelA~e~~~-~v~f~kVDVDe~ 84 (160)
T 2av4_A 40 DERLVCIRFGHDYDPDCMKMDELLYKVADDIKN-FCVIYLVDITEV 84 (160)
T ss_dssp SSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTT-TEEEEEEETTTC
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHccC-CcEEEEEECCCC
Confidence 446788899999999999999999998888742 367777777653
No 204
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=96.30 E-value=0.0071 Score=57.95 Aligned_cols=46 Identities=9% Similarity=-0.075 Sum_probs=39.9
Q ss_pred CCCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHH--CCCEEEEEeCCC
Q 025756 95 KDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDA--SGVALVLIGPGS 140 (248)
Q Consensus 95 ~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~--~Gv~vV~Is~~~ 140 (248)
+.++.+|+.|+..||+.|+..+..+.+.+.+++. .++.++.|.++.
T Consensus 28 ~~~k~vlV~FyA~WC~pCk~~~P~l~~la~~~~~~~~~v~~~~VD~d~ 75 (519)
T 3t58_A 28 GSSSAWAVEFFASWCGHAIAFAPTWKELANDVKDWRPALNLAVLDCAE 75 (519)
T ss_dssp SCSSEEEEEEECTTSHHHHHHHHHHHHHHHHHGGGTTTEEEEEEETTS
T ss_pred hCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhCcCCcEEEEEEECCc
Confidence 3457888999999999999999999999999875 478999999864
No 205
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=96.24 E-value=0.0056 Score=55.62 Aligned_cols=61 Identities=8% Similarity=0.132 Sum_probs=43.8
Q ss_pred EecCCCCeEeCCCccCCCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHH-----CCCEEEEEeCCCHH
Q 025756 80 VYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDA-----SGVALVLIGPGSVE 142 (248)
Q Consensus 80 L~d~~G~~v~l~~l~~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~-----~Gv~vV~Is~~~~~ 142 (248)
+.+.+++.+. +...+++.+|+.|...||+.|+.....+.+...++++ .++.++.|.++...
T Consensus 7 v~~l~~~~f~--~~~~~~~~vlV~F~a~wC~~C~~~~p~~~~~a~~~~~~~~~~~~v~~~~Vd~~~~~ 72 (382)
T 2r2j_A 7 ITSLDTENID--EILNNADVALVNFYADWCRFSQMLHPIFEEASDVIKEEFPNENQVVFARVDCDQHS 72 (382)
T ss_dssp -CBCCTTTHH--HHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTCC---CCEEEEEEETTTCH
T ss_pred eEECCHHHHH--HHHhcCCeEEEEEECCCCHHHHHHHHHHHHHHHHHHhhcCCCCceEEEEEECCccH
Confidence 3344444332 2333456788888899999999999999999988863 34888888887653
No 206
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=96.08 E-value=0.0036 Score=58.24 Aligned_cols=45 Identities=11% Similarity=-0.012 Sum_probs=38.9
Q ss_pred eEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCCHHH
Q 025756 98 KAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQ 143 (248)
Q Consensus 98 ~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~~~~ 143 (248)
+.+|+.|...||+.|+.....+.+...+++.. +.++.|.++....
T Consensus 22 ~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~-v~~~~vd~~~~~~ 66 (481)
T 3f8u_A 22 GLMLVEFFAPWCGHAKRLAPEYEAAATRLKGI-VPLAKVDCTANTN 66 (481)
T ss_dssp SEEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-CCEEEEETTTCHH
T ss_pred CeEEEEEECCCCHHHHHhHHHHHHHHHHhcCc-eEEEEEECCCCHH
Confidence 78888889999999999999999999888765 8889998887543
No 207
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=95.89 E-value=0.0086 Score=55.64 Aligned_cols=44 Identities=9% Similarity=0.119 Sum_probs=36.8
Q ss_pred CeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHC-CCEEEEEeCCC
Q 025756 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDAS-GVALVLIGPGS 140 (248)
Q Consensus 97 ~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~-Gv~vV~Is~~~ 140 (248)
++.+|+.|+..||+.|+.....|.+...+++.. ++.++.|..+.
T Consensus 370 ~k~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~~v~~~~id~~~ 414 (481)
T 3f8u_A 370 NKDVLIEFYAPWCGHCKNLEPKYKELGEKLSKDPNIVIAKMDATA 414 (481)
T ss_dssp TCEEEEEEECTTBHHHHHHHHHHHHHHHHTTTCSSEEEEEEETTS
T ss_pred CCcEEEEEecCcChhHHHhhHHHHHHHHHhccCCCEEEEEEECCc
Confidence 567888888999999999999999999888764 67777777655
No 208
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=95.78 E-value=0.0049 Score=49.52 Aligned_cols=71 Identities=8% Similarity=0.121 Sum_probs=39.7
Q ss_pred CeEEEEEEcCCCChhhHHHHHHHHhcHH--HHHHCCCEEEEEeCCCHHHHHHHHhhcCCCC----CCCh-HHHHHcCCc
Q 025756 97 RKAVVAFARHFGCVLCRKRADYLAAKKD--VMDASGVALVLIGPGSVEQARTFSEQTKFKG----DPNH-SSYEALSFV 168 (248)
Q Consensus 97 ~~vvlvF~R~~~Cp~C~~~l~~L~~~~~--~l~~~Gv~vV~Is~~~~~~~~~f~~~~~fp~----Dp~~-~~y~alGl~ 168 (248)
++.||+.|...||+.|+.....+.+..+ ++...++..|-|..+..+....| ...++|- |++. .+++..|..
T Consensus 44 ~KpVlV~F~A~WC~~Ck~m~p~~~~~~~~~~~~~~~fv~V~vD~e~~~~~~~~-~v~~~PT~~f~~~~G~~v~~~~G~~ 121 (151)
T 3ph9_A 44 KKPLMVIHHLEDCQYSQALKKVFAQNEEIQEMAQNKFIMLNLMHETTDKNLSP-DGQYVPRIMFVDPSLTVRADIAGRY 121 (151)
T ss_dssp TCCEEEEECCTTCHHHHHHHHHHHHCHHHHHHHHHTCEEEEESSCCSCGGGCT-TCCCSSEEEEECTTSCBCTTCCCSC
T ss_pred CCcEEEEEECCCCHhHHHHHHHHhcCHHHHHHhhcCeEEEEecCCchhhHhhc-CCCCCCEEEEECCCCCEEEEEeCCc
Confidence 4556667779999999999998887522 22223444444432222222222 1234663 8554 455556653
No 209
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=95.75 E-value=0.013 Score=52.17 Aligned_cols=46 Identities=11% Similarity=0.161 Sum_probs=36.0
Q ss_pred CCCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHC-CCEEEEEeCCC
Q 025756 95 KDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDAS-GVALVLIGPGS 140 (248)
Q Consensus 95 ~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~-Gv~vV~Is~~~ 140 (248)
..++.+++.|+..||+.|+.....|.+...+++.. ++.++.|..+.
T Consensus 265 ~~~k~~lv~f~a~wC~~C~~~~p~~~~la~~~~~~~~v~~~~vd~~~ 311 (361)
T 3uem_A 265 DEKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIVIAKMDSTA 311 (361)
T ss_dssp CTTCEEEEEEECTTCHHHHHHHHHHHHHHHHTTTCSSEEEEEEETTT
T ss_pred cCCCcEEEEEecCcCHhHHHHHHHHHHHHHHhccCCcEEEEEEECCc
Confidence 34567888888999999999999999999888754 46666665543
No 210
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=95.72 E-value=0.0031 Score=49.93 Aligned_cols=50 Identities=8% Similarity=-0.062 Sum_probs=27.0
Q ss_pred CCCccCCCeEEEEEEcCCC--ChhhHHHHHHHHhcHHHHHHCCCE--EEEEeCCCH
Q 025756 90 ISDLWKDRKAVVAFARHFG--CVLCRKRADYLAAKKDVMDASGVA--LVLIGPGSV 141 (248)
Q Consensus 90 l~~l~~~~~vvlvF~R~~~--Cp~C~~~l~~L~~~~~~l~~~Gv~--vV~Is~~~~ 141 (248)
+.++....+.+|+||...| |+.|+.....|.+...++ .++. ++.|..+..
T Consensus 27 f~~~i~~~~~~vv~f~~~~~~C~~C~~l~P~l~~la~~~--~~v~~~~~~Vd~d~~ 80 (142)
T 2es7_A 27 VDDWIKRVGDGVILLSSDPRRTPEVSDNPVMIAELLREF--PQFDWQVAVADLEQS 80 (142)
T ss_dssp -------CCSEEEEECCCSCC----CCHHHHHHHHHHTC--TTSCCEEEEECHHHH
T ss_pred HHHHHHhCCCEEEEEECCCCCCccHHHHHHHHHHHHHHh--cccceeEEEEECCCC
Confidence 3343333223444555555 999999999999988887 3577 888876643
No 211
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=95.70 E-value=0.026 Score=45.91 Aligned_cols=43 Identities=14% Similarity=0.080 Sum_probs=33.6
Q ss_pred CCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCC
Q 025756 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG 139 (248)
Q Consensus 96 ~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~ 139 (248)
+++++|+.|..+|||+|+.....|.+...++.. ++.++-+...
T Consensus 24 ~~~~~vv~f~d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~~~~ 66 (195)
T 3hd5_A 24 PGKIEVLEFFAYTCPHCAAIEPMVEDWAKTAPQ-DVVLKQVPIA 66 (195)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHTCCT-TEEEEEEECC
T ss_pred CCCeEEEEEECCCCccHHHhhHHHHHHHHHCCC-CeEEEEEecc
Confidence 467888888999999999999988877766644 5676666654
No 212
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=95.68 E-value=0.011 Score=51.32 Aligned_cols=41 Identities=15% Similarity=0.047 Sum_probs=34.5
Q ss_pred CeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCC
Q 025756 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG 139 (248)
Q Consensus 97 ~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~ 139 (248)
++.||+.|+..||+.|+.....|.++..++. ++.++.|..+
T Consensus 133 ~k~VvV~Fya~wC~~Ck~l~p~l~~La~~~~--~v~f~kVd~d 173 (245)
T 1a0r_P 133 ITTIVVHIYEDGIKGCDALNSSLICLAAEYP--MVKFCKIKAS 173 (245)
T ss_dssp TCEEEEEEECTTSTTHHHHHHHHHHHHHHCT--TSEEEEEEHH
T ss_pred CCEEEEEEECCCChHHHHHHHHHHHHHHHCC--CCEEEEEeCC
Confidence 5678888889999999999999999888774 5888888764
No 213
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=95.67 E-value=0.0035 Score=47.74 Aligned_cols=45 Identities=16% Similarity=0.123 Sum_probs=31.4
Q ss_pred CCCeEEEEEEcCCCCh--------------hhHHHHHHHHhcHHHHHHCCCEEEEEeCCC
Q 025756 95 KDRKAVVAFARHFGCV--------------LCRKRADYLAAKKDVMDASGVALVLIGPGS 140 (248)
Q Consensus 95 ~~~~vvlvF~R~~~Cp--------------~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~ 140 (248)
+.++.+|+.|+..||+ .|+.....+.+...++.. ++.++.|..+.
T Consensus 19 ~~~k~vlv~F~a~wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~~-~~~~~~vd~d~ 77 (123)
T 1oaz_A 19 KADGAILVDFWAEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQG-KLTVAKLNIDQ 77 (123)
T ss_dssp SCSSEEEEEEECSSCSCBSSSTTSCCSCCCCCCTTHHHHTTC--------CEEEEEETTS
T ss_pred hCCCeEEEEEECCCCccccccccccccCCCCcHHHHHHHHHHHHHhcC-CeEEEEEECCC
Confidence 3456777788899999 999999999988877754 48888887654
No 214
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=95.56 E-value=0.019 Score=56.83 Aligned_cols=47 Identities=9% Similarity=-0.153 Sum_probs=37.6
Q ss_pred CCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCCHHH
Q 025756 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQ 143 (248)
Q Consensus 96 ~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~~~~ 143 (248)
.++.+|+.|+..||+.|+..+..|.+...+++. ++.++.|..+....
T Consensus 674 ~~~~v~v~F~a~wC~~C~~~~p~~~~la~~~~~-~~~~~~vd~~~~~~ 720 (780)
T 3apo_A 674 GKTHWVVDFYAPWSGPSQNFAPEFELLARMIKG-KVRAGKVDCQAYPQ 720 (780)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT-TCEEEEEETTTCHH
T ss_pred CCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcC-CceEEEEECCCCHH
Confidence 345667777799999999999999998888854 68899998876543
No 215
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=95.53 E-value=0.017 Score=57.14 Aligned_cols=57 Identities=5% Similarity=-0.123 Sum_probs=42.6
Q ss_pred CeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCCHHHHHHHHhhcCCC
Q 025756 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFK 154 (248)
Q Consensus 97 ~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~~~~~~~f~~~~~fp 154 (248)
++.+++.|+..||+.|++.+..|.+...+++. .+.++.|.++....+.+...-.++|
T Consensus 455 ~~~vlv~F~a~wC~~c~~~~p~~~~~a~~~~~-~v~~~~vd~~~~~~~~~~~~v~~~P 511 (780)
T 3apo_A 455 KEPWLVDFFAPWSPPSRALLPELRKASTLLYG-QLKVGTLDCTIHEGLCNMYNIQAYP 511 (780)
T ss_dssp CSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTCHHHHHHTTCCSSS
T ss_pred CCeEEEEEECCCCHHHHHHhHHHHHHHHHhcC-CeEEEEEeCCCCHHHHHHcCCCcCC
Confidence 45677778889999999999999999998863 5899999988655443333323355
No 216
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=95.39 E-value=0.0055 Score=45.46 Aligned_cols=28 Identities=18% Similarity=0.230 Sum_probs=20.2
Q ss_pred ccCCCeEEEEEEcCCCChhhHHHHHHHHhc
Q 025756 93 LWKDRKAVVAFARHFGCVLCRKRADYLAAK 122 (248)
Q Consensus 93 l~~~~~vvlvF~R~~~Cp~C~~~l~~L~~~ 122 (248)
+.++.++ ++ |+..|||+|+.....|.+.
T Consensus 16 ~~~~~~v-v~-f~a~~C~~C~~~~~~l~~~ 43 (116)
T 2e7p_A 16 LASSAPV-VV-FSKTYCGYCNRVKQLLTQV 43 (116)
T ss_dssp HHTSSSE-EE-EECTTCHHHHHHHHHHHHH
T ss_pred HHcCCCE-EE-EECCCChhHHHHHHHHHHc
Confidence 3444444 44 7899999999988877665
No 217
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=95.34 E-value=0.0095 Score=45.91 Aligned_cols=46 Identities=9% Similarity=0.019 Sum_probs=34.7
Q ss_pred CccCCCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCC
Q 025756 92 DLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS 140 (248)
Q Consensus 92 ~l~~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~ 140 (248)
++++..+.+|+||...||++|+.-...|.+...+ .++.++-|-.+.
T Consensus 19 ~ii~~~~~vvi~khatwCgpc~~~~~~~e~~~~~---~~v~~~~vdVde 64 (112)
T 3iv4_A 19 QVIEENKYVFVLKHSETCPISANAYDQFNKFLYE---RDMDGYYLIVQQ 64 (112)
T ss_dssp HHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHH---HTCCEEEEEGGG
T ss_pred HHHhcCCCEEEEEECCcCHhHHHHHHHHHHHhcc---CCceEEEEEeec
Confidence 3444467889999999999999999999887653 457777775543
No 218
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=95.31 E-value=0.041 Score=44.60 Aligned_cols=41 Identities=20% Similarity=0.234 Sum_probs=31.1
Q ss_pred CCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEe
Q 025756 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIG 137 (248)
Q Consensus 96 ~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is 137 (248)
+.+++|+.|..+|||+|+.....|.+...++.. ++.++-+.
T Consensus 24 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~p 64 (192)
T 3h93_A 24 PGKIEVVELFWYGCPHCYAFEPTIVPWSEKLPA-DVHFVRLP 64 (192)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHTCCT-TEEEEEEE
T ss_pred CCCCEEEEEECCCChhHHHhhHHHHHHHHhCCC-CeEEEEEe
Confidence 468899999999999999999988776666543 45555443
No 219
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=95.24 E-value=0.026 Score=43.21 Aligned_cols=40 Identities=13% Similarity=-0.009 Sum_probs=32.8
Q ss_pred EEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCC
Q 025756 99 AVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS 140 (248)
Q Consensus 99 vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~ 140 (248)
.||+.|+..||+.|+.....|.++..++. ++.++-|..+.
T Consensus 25 ~vvv~F~a~wc~~C~~~~p~l~~la~~~~--~v~f~kvd~d~ 64 (118)
T 3evi_A 25 WVIIHLYRSSIPMCLLVNQHLSLLARKFP--ETKFVKAIVNS 64 (118)
T ss_dssp EEEEEEECTTSHHHHHHHHHHHHHHHHCT--TSEEEEEEGGG
T ss_pred eEEEEEeCCCChHHHHHHHHHHHHHHHCC--CCEEEEEEhHH
Confidence 77888889999999999999988877763 57888777654
No 220
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13
Probab=95.16 E-value=0.045 Score=43.58 Aligned_cols=50 Identities=14% Similarity=0.065 Sum_probs=38.2
Q ss_pred eEeCCCccCCCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHC-CCEEEEEeC
Q 025756 87 AIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDAS-GVALVLIGP 138 (248)
Q Consensus 87 ~v~l~~l~~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~-Gv~vV~Is~ 138 (248)
.+.+++- +.++.|+.|..++||+|+.....+.+...++.+. .++++.+..
T Consensus 19 ~~~~G~~--~a~v~i~~f~D~~Cp~C~~~~~~~~~~~~~~~~~~~v~~~~~~~ 69 (175)
T 1z6m_A 19 GLHIGES--NAPVKMIEFINVRCPYCRKWFEESEELLAQSVKSGKVERIIKLF 69 (175)
T ss_dssp SEEESCT--TCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHTTSEEEEEEEC
T ss_pred CcccCCC--CCCeEEEEEECCCCcchHHHHHHHHHHHHHHhhCCcEEEEEEeC
Confidence 3556653 5688899999999999999999998877776433 477777654
No 221
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=95.08 E-value=0.039 Score=45.49 Aligned_cols=43 Identities=5% Similarity=0.140 Sum_probs=34.2
Q ss_pred CCeEEEEEEcCC-CChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCC
Q 025756 96 DRKAVVAFARHF-GCVLCRKRADYLAAKKDVMDASGVALVLIGPGS 140 (248)
Q Consensus 96 ~~~vvlvF~R~~-~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~ 140 (248)
+++++|++|... ||+.|++....|.+.... ...+.++.|..+.
T Consensus 21 ~~~v~lv~f~~~~~C~~C~~~~~~~~~la~~--~~~v~~~~vd~~~ 64 (226)
T 1a8l_A 21 VNPVKLIVFVRKDHCQYCDQLKQLVQELSEL--TDKLSYEIVDFDT 64 (226)
T ss_dssp CSCEEEEEEECSSSCTTHHHHHHHHHHHHTT--CTTEEEEEEETTS
T ss_pred CCCeEEEEEecCCCCchhHHHHHHHHHHHhh--CCceEEEEEeCCC
Confidence 457888888888 999999988888876533 2458888888887
No 222
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=95.01 E-value=0.021 Score=48.26 Aligned_cols=40 Identities=15% Similarity=0.057 Sum_probs=32.5
Q ss_pred eEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCC
Q 025756 98 KAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG 139 (248)
Q Consensus 98 ~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~ 139 (248)
+.||+.|+..||+.|+.....|.++..++. ++.++.|..+
T Consensus 121 k~vvV~F~a~wC~~C~~l~p~l~~la~~~~--~v~f~~vd~~ 160 (217)
T 2trc_P 121 TTIVVNIYEDGVRGCDALNSSLECLAAEYP--MVKFCKIRAS 160 (217)
T ss_dssp CEEEEEEECTTSTTHHHHHHHHHHHHTTCT--TSEEEEEEHH
T ss_pred cEEEEEEECCCCccHHHHHHHHHHHHHHCC--CeEEEEEECC
Confidence 567777779999999999999988877763 6888888754
No 223
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=94.99 E-value=0.067 Score=44.25 Aligned_cols=44 Identities=18% Similarity=0.256 Sum_probs=32.5
Q ss_pred eEEEEEEcC-------CCChhhHHHHHHHHhcHHHHHH----CCCEEEEEeCCCH
Q 025756 98 KAVVAFARH-------FGCVLCRKRADYLAAKKDVMDA----SGVALVLIGPGSV 141 (248)
Q Consensus 98 ~vvlvF~R~-------~~Cp~C~~~l~~L~~~~~~l~~----~Gv~vV~Is~~~~ 141 (248)
..||++|+. .||++|+.....|.++..++.. ..+.++-|-.+..
T Consensus 38 ~~vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~~~~~~~~~v~f~kvD~d~~ 92 (178)
T 3ga4_A 38 YFNILYITMRGTNSNGMSCQLCHDFEKTYHAVADVIRSQAPQSLNLFFTVDVNEV 92 (178)
T ss_dssp CEEEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHHHHHCTTCCEEEEEEETTTC
T ss_pred CcEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHhhhccCCCCEEEEEEECccC
Confidence 356667766 5999999999999999888863 3356666666653
No 224
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=94.93 E-value=0.017 Score=54.18 Aligned_cols=43 Identities=19% Similarity=0.221 Sum_probs=33.6
Q ss_pred CeEEEEEEcCCCChhhHHHHHHHHhcHHHHHH--CCCEEEEEeCC
Q 025756 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDA--SGVALVLIGPG 139 (248)
Q Consensus 97 ~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~--~Gv~vV~Is~~ 139 (248)
++.+|+.|+..||+.|+.....+.+...++.. .++.++.|..+
T Consensus 376 ~k~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~ 420 (504)
T 2b5e_A 376 KKDVLVLYYAPWCGHCKRLAPTYQELADTYANATSDVLIAKLDHT 420 (504)
T ss_dssp TCCEEEEEECTTCHHHHHHHHHHHHHHHHHHHHCSSCEEEEEEGG
T ss_pred CCCEEEEEECCCChhHHHHhHHHHHHHHHhhccCCcEEEEEecCC
Confidence 45667777899999999999999999888863 35666666654
No 225
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=94.85 E-value=0.042 Score=45.57 Aligned_cols=46 Identities=7% Similarity=-0.005 Sum_probs=35.6
Q ss_pred CCeEEEEEE----cCCCChhhHHHHHHHHhcHHHHHH-CCCEEEEEeCCCH
Q 025756 96 DRKAVVAFA----RHFGCVLCRKRADYLAAKKDVMDA-SGVALVLIGPGSV 141 (248)
Q Consensus 96 ~~~vvlvF~----R~~~Cp~C~~~l~~L~~~~~~l~~-~Gv~vV~Is~~~~ 141 (248)
++|++|+|| +..||+.|+..+.++.+.+.++.. ..+.++.|.++..
T Consensus 20 ~~~v~v~~~~~~~~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~vd~~~~ 70 (229)
T 2ywm_A 20 KEPVSIKLFSQAIGCESCQTAEELLKETVEVIGEAVGQDKIKLDIYSPFTH 70 (229)
T ss_dssp CSCEEEEEECCCTTCGGGGHHHHHHHHHHHHHHHHHCTTTEEEEEECTTTC
T ss_pred cCCeEEEEEccCCCCcccHHHHHHHHHHHHHHhccCCCCceEEEEecCccc
Confidence 468888888 577899999999999988777643 3577778876654
No 226
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=94.85 E-value=0.051 Score=37.48 Aligned_cols=39 Identities=18% Similarity=0.362 Sum_probs=27.0
Q ss_pred EEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCCHHHHHH
Q 025756 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQART 146 (248)
Q Consensus 101 lvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~~~~~~~ 146 (248)
|++|...|||+|++....|. +.|+.+..|..+....+.+
T Consensus 3 v~~f~~~~C~~C~~~~~~l~-------~~~i~~~~vdi~~~~~~~~ 41 (81)
T 1h75_A 3 ITIYTRNDCVQCHATKRAME-------NRGFDFEMINVDRVPEAAE 41 (81)
T ss_dssp EEEEECTTCHHHHHHHHHHH-------HTTCCCEEEETTTCHHHHH
T ss_pred EEEEcCCCChhHHHHHHHHH-------HCCCCeEEEECCCCHHHHH
Confidence 45678899999998666554 4578877787775333333
No 227
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=94.69 E-value=0.019 Score=45.79 Aligned_cols=43 Identities=2% Similarity=-0.124 Sum_probs=31.8
Q ss_pred CCeEEEEEEcCCC--ChhhHHHHHHHHhcHHHHHHCCCEEEEEeCC
Q 025756 96 DRKAVVAFARHFG--CVLCRKRADYLAAKKDVMDASGVALVLIGPG 139 (248)
Q Consensus 96 ~~~vvlvF~R~~~--Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~ 139 (248)
++++| +||+..| |+.|+....-|.++..++....++++-|..|
T Consensus 34 ~~~vl-VdF~a~~crCgpCk~iaPvleela~e~~g~~v~~~KVdvD 78 (140)
T 2qgv_A 34 APDGV-VLLSSDPKRTPEVSDNPVMIGELLHEFPDYTWQVAIADLE 78 (140)
T ss_dssp CSSEE-EEECCCTTTCTTTTHHHHHHHHHHTTCTTSCCEEEECCHH
T ss_pred CCCEE-EEEeCCcccCCcHHHHHhHHHHHHHHcCCCeEEEEEEECC
Confidence 45555 4888988 9999999999988888875333666666544
No 228
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=94.66 E-value=0.033 Score=46.54 Aligned_cols=38 Identities=18% Similarity=0.345 Sum_probs=29.9
Q ss_pred CCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEe
Q 025756 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIG 137 (248)
Q Consensus 96 ~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is 137 (248)
+.+++|+.|..+|||+|++....|.+. .+.|++++.+.
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~~----~~~~v~v~~~~ 122 (211)
T 1t3b_A 85 NEKHVVTVFMDITCHYCHLLHQQLKEY----NDLGITVRYLA 122 (211)
T ss_dssp TCSEEEEEEECTTCHHHHHHHTTHHHH----HHTTEEEEEEE
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHHH----HhCCcEEEEEE
Confidence 457888899999999999998888773 33478887653
No 229
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=94.57 E-value=0.021 Score=42.66 Aligned_cols=29 Identities=14% Similarity=0.283 Sum_probs=23.6
Q ss_pred eEEEEEEcCCCChhhHHHHHHHHhcHHHH
Q 025756 98 KAVVAFARHFGCVLCRKRADYLAAKKDVM 126 (248)
Q Consensus 98 ~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l 126 (248)
+.+|+.|+..||+.|+.....|.+...++
T Consensus 13 k~~vV~F~A~WC~~C~~~~p~~~~~a~~~ 41 (106)
T 3kp8_A 13 QIGGTMYGAYWCPHCQDQKELFGAAFDQV 41 (106)
T ss_dssp HHTCEEEECTTCHHHHHHHHHHGGGGGGS
T ss_pred CCEEEEEECCCCHHHHHHHHHHHHHHHhC
Confidence 34567788999999999999998876555
No 230
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=94.53 E-value=0.017 Score=46.90 Aligned_cols=42 Identities=17% Similarity=0.070 Sum_probs=31.2
Q ss_pred CCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeC
Q 025756 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGP 138 (248)
Q Consensus 96 ~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~ 138 (248)
+.++.|+.|..+|||+|......|.+..+++.. .+.+..+..
T Consensus 21 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~p~ 62 (195)
T 2znm_A 21 SGKIEVLEFFGYFCVHCHHFDPLLLKLGKALPS-DAYLRTEHV 62 (195)
T ss_dssp SSSEEEEEEECTTSCCTTSSCHHHHHHHHHSCT-TEEEEEEEC
T ss_pred CCCcEEEEEECCCChhHHHHhHHHHHHHHHCCC-ceEEEEecc
Confidence 357888888999999999999988876666532 456555543
No 231
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=94.49 E-value=0.057 Score=37.52 Aligned_cols=36 Identities=25% Similarity=0.397 Sum_probs=24.6
Q ss_pred EEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCC
Q 025756 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG 139 (248)
Q Consensus 101 lvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~ 139 (248)
+.+|...|||+|+.....|.+.. ++.|+.+..+..+
T Consensus 4 ~~~f~~~~C~~C~~~~~~l~~~~---~~~~~~~~~~~v~ 39 (80)
T 2k8s_A 4 KAIFYHAGCPVCVSAEQAVANAI---DPSKYTVEIVHLG 39 (80)
T ss_dssp EEEEEECSCHHHHHHHHHHHHHS---CTTTEEEEEEETT
T ss_pred eEEEeCCCCCchHHHHHHHHHHH---HhcCCeEEEEEec
Confidence 45566899999999888876643 3445665555544
No 232
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=94.46 E-value=0.079 Score=35.68 Aligned_cols=39 Identities=21% Similarity=0.356 Sum_probs=26.2
Q ss_pred EEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCCHHHHHH
Q 025756 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQART 146 (248)
Q Consensus 101 lvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~~~~~~~ 146 (248)
+.+|...|||+|++....|. +.|+.+..|..+......+
T Consensus 3 i~~y~~~~C~~C~~~~~~l~-------~~~i~~~~~di~~~~~~~~ 41 (75)
T 1r7h_A 3 ITLYTKPACVQCTATKKALD-------RAGLAYNTVDISLDDEARD 41 (75)
T ss_dssp EEEEECTTCHHHHHHHHHHH-------HTTCCCEEEETTTCHHHHH
T ss_pred EEEEeCCCChHHHHHHHHHH-------HcCCCcEEEECCCCHHHHH
Confidence 45678899999998766654 4467777776665333333
No 233
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=94.43 E-value=0.062 Score=48.53 Aligned_cols=50 Identities=12% Similarity=0.049 Sum_probs=35.4
Q ss_pred CCCeEEEEEEcCCCChhhHHHH------HHHHhcHHHHHHCCCEEEEEeCCCHHHH
Q 025756 95 KDRKAVVAFARHFGCVLCRKRA------DYLAAKKDVMDASGVALVLIGPGSVEQA 144 (248)
Q Consensus 95 ~~~~vvlvF~R~~~Cp~C~~~l------~~L~~~~~~l~~~Gv~vV~Is~~~~~~~ 144 (248)
+..+.+|+.|...||+.|+..- ..+.+...+++..++.++.|.++....+
T Consensus 28 ~~~~~vlV~FyApWC~~~~~~~~l~~~~p~~e~~a~~~~~~~v~~~~Vd~~~~~~l 83 (367)
T 3us3_A 28 KKYEVLALLYHEPPEDDKASQRQFEMEELILELAAQVLEDKGVGFGLVDSEKDAAV 83 (367)
T ss_dssp HHCSEEEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEETTTTHHH
T ss_pred hhCCeEEEEEECCCchhHHHhhhhccccHHHHHHHHHhhcCCceEEEEeCcccHHH
Confidence 3456788888899999984322 2566667777666899999998875443
No 234
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=94.36 E-value=0.044 Score=40.34 Aligned_cols=49 Identities=16% Similarity=0.209 Sum_probs=30.7
Q ss_pred CCeEeCCCccCCCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCC
Q 025756 85 GNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG 139 (248)
Q Consensus 85 G~~v~l~~l~~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~ 139 (248)
|..-.|.......+. |++|...||++|+.....|.+.. .++.+.-|..+
T Consensus 4 ~~~~~l~~~~~~~~~-v~~f~~~~C~~C~~~~~~L~~l~-----~~i~~~~vdi~ 52 (100)
T 1wjk_A 4 GSSGNLSASNRALPV-LTLFTKAPCPLCDEAKEVLQPYK-----DRFILQEVDIT 52 (100)
T ss_dssp CCCCCCCCSCCCCCE-EEEEECSSCHHHHHHHHHTSTTS-----SSSEEEEEETT
T ss_pred CcchhhhhccCCCCE-EEEEeCCCCcchHHHHHHHHHhh-----hCCeEEEEECC
Confidence 333344443334444 55567889999998777765432 34788888776
No 235
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=94.11 E-value=0.067 Score=40.55 Aligned_cols=38 Identities=21% Similarity=0.243 Sum_probs=27.5
Q ss_pred EEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCC
Q 025756 99 AVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG 139 (248)
Q Consensus 99 vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~ 139 (248)
..|+.|...||++|+.....|.+..++ .|+.+.-|..+
T Consensus 30 ~~vv~y~~~~C~~C~~a~~~L~~l~~e---~~i~~~~vDId 67 (107)
T 2fgx_A 30 RKLVVYGREGCHLCEEMIASLRVLQKK---SWFELEVINID 67 (107)
T ss_dssp CCEEEEECSSCHHHHHHHHHHHHHHHH---SCCCCEEEETT
T ss_pred cEEEEEeCCCChhHHHHHHHHHHHHHh---cCCeEEEEECC
Confidence 357778889999999888888766544 35666666655
No 236
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=93.61 E-value=0.12 Score=40.99 Aligned_cols=42 Identities=14% Similarity=0.033 Sum_probs=33.4
Q ss_pred EEEEEEcCCCC--hhhHHHHHHHHhcHHHHHHCCCEEEEEeCCCH
Q 025756 99 AVVAFARHFGC--VLCRKRADYLAAKKDVMDASGVALVLIGPGSV 141 (248)
Q Consensus 99 vvlvF~R~~~C--p~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~~ 141 (248)
.+|++|++.|| +.|+....-|.++..++.. .++++-|..|..
T Consensus 35 ~vlVdF~A~wCr~gpCk~iaPvleela~e~~~-~v~~~KVdvDe~ 78 (137)
T 2qsi_A 35 IVVLFFRGDAVRFPEAADLAVVLPELINAFPG-RLVAAEVAAEAE 78 (137)
T ss_dssp EEEEEECCCTTTCTTHHHHHHHHHHHHHTSTT-TEEEEEECGGGH
T ss_pred cEEEEEeCCccCCCchhhHHhHHHHHHHHccC-CcEEEEEECCCC
Confidence 68899999999 9999999999888887742 466776665543
No 237
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=93.58 E-value=0.1 Score=36.10 Aligned_cols=37 Identities=11% Similarity=0.195 Sum_probs=27.6
Q ss_pred EEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCC
Q 025756 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG 139 (248)
Q Consensus 101 lvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~ 139 (248)
|++|...|||+|+.....|.+...+. .|+.++.|..+
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~l~~~~--~~i~~~~vdi~ 39 (85)
T 1ego_A 3 TVIFGRSGCPYCVRAKDLAEKLSNER--DDFQYQYVDIR 39 (85)
T ss_dssp EEEECCTTSTHHHHHHHHHHHHHHHH--SSCEEEEECHH
T ss_pred EEEEeCCCCCCHHHHHHHHHHHHhcC--CCceEEEEecc
Confidence 55678899999999888887765442 57887777643
No 238
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=93.53 E-value=0.24 Score=46.52 Aligned_cols=36 Identities=22% Similarity=0.181 Sum_probs=28.9
Q ss_pred CCCccccCcCCCcEEecCCCCeEeCCCccCCCeEEEE
Q 025756 66 SVSEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVA 102 (248)
Q Consensus 66 ~~~~~~g~~ap~f~L~d~~G~~v~l~~l~~~~~vvlv 102 (248)
.++...|..+|+.-|.. +|+.+++-|+++.+.+||.
T Consensus 417 ~~~~~pG~r~p~~~l~~-~~~~~~~~dl~g~~f~ll~ 452 (535)
T 3ihg_A 417 TPSGRPGFRGPHVLVSR-HGERLSTVDLFGDGWTLLA 452 (535)
T ss_dssp SCCCCTTSBCCCCEEEE-TTEEEEGGGGCSSSEEEEE
T ss_pred CCCCCCCCcCCCceeec-CCceeeHHHhcCCceEEEe
Confidence 45678899999999854 5888999999987766665
No 239
>3l78_A Regulatory protein SPX; transcription, transcriptional factor, disulfide bond, redox-active center, transcription regulati; 1.90A {Streptococcus mutans} SCOP: c.47.1.12
Probab=93.29 E-value=0.25 Score=37.74 Aligned_cols=62 Identities=16% Similarity=0.175 Sum_probs=48.6
Q ss_pred EEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeC----CCHHHHHHHHhhcCCCC----CCChHHHHHcCCcc
Q 025756 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGP----GSVEQARTFSEQTKFKG----DPNHSSYEALSFVS 169 (248)
Q Consensus 101 lvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~----~~~~~~~~f~~~~~fp~----Dp~~~~y~alGl~~ 169 (248)
+.+|-..+|+.|++....| ++.|+....|.. .+.+.++++.+..+.+. ......|+.+|+..
T Consensus 2 i~iY~~~~C~~c~ka~~~L-------~~~gi~~~~~di~~~~~~~~el~~~l~~~~~~~~~l~n~~~~~~k~l~~~~ 71 (120)
T 3l78_A 2 VTLFLSPSCTSCRKARAWL-------NRHDVVFQEHNIMTSPLSRDELLKILSYTENGTEDIISTRSKVFQKLDIDV 71 (120)
T ss_dssp EEEEECSSCHHHHHHHHHH-------HHTTCCEEEEETTTSCCCHHHHHHHHHHCSSTHHHHBCTTCHHHHHTTCCG
T ss_pred EEEEeCCCCHHHHHHHHHH-------HHcCCCeEEEecccCCCcHHHHHHHHhhcCCCHHHhhcCCcHHHHHcCCCc
Confidence 5678889999999877666 567777666653 35578899998777765 99999999999864
No 240
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=93.17 E-value=0.88 Score=44.41 Aligned_cols=75 Identities=15% Similarity=0.049 Sum_probs=48.4
Q ss_pred CCccccCcCCCcEEecC-CCCeEeCCCccC--CCeEEEEEEcCCCChhhHHHHHHHHhcH-------HHHHH------CC
Q 025756 67 VSEDTKNLLDTVKVYDV-NGNAIPISDLWK--DRKAVVAFARHFGCVLCRKRADYLAAKK-------DVMDA------SG 130 (248)
Q Consensus 67 ~~~~~g~~ap~f~L~d~-~G~~v~l~~l~~--~~~vvlvF~R~~~Cp~C~~~l~~L~~~~-------~~l~~------~G 130 (248)
+...+|..+|++.|... +|+++.|.+++. ++.+||+|--..-.+.+...+.++.+.. .++.. .-
T Consensus 477 ~~~~~G~r~p~~~~~~~~~g~~~~l~~~l~~~g~~~ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 556 (665)
T 1pn0_A 477 KNCVVGTRFKSQPVVRHSEGLWMHFGDRLVTDGRFRIIVFAGKATDATQMSRIKKFAAYLDSENSVISRYTPKGADRNSR 556 (665)
T ss_dssp TTSCTTSBCCCCEEEETTTTEEEEGGGGCCCSSCEEEEEEEECTTSHHHHHHHHHHHHHHHSTTSHHHHHSBTTSCTTSS
T ss_pred CCCCCcCCCCCCeEEecCCCcEEEHhHhhccCCCEEEEEecCCcccchhHHHHHHHHHHhhccccHHhhcCCcccCccce
Confidence 34578999999999764 899999999885 4677777654333344555555555533 22211 12
Q ss_pred CEEEEEeCCCH
Q 025756 131 VALVLIGPGSV 141 (248)
Q Consensus 131 v~vV~Is~~~~ 141 (248)
++++.|.+...
T Consensus 557 ~~~~~i~~~~~ 567 (665)
T 1pn0_A 557 IDVITIHSCHR 567 (665)
T ss_dssp EEEEEEESSCT
T ss_pred eEEEEEecCCC
Confidence 67888866643
No 241
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=92.93 E-value=0.13 Score=43.73 Aligned_cols=46 Identities=15% Similarity=0.037 Sum_probs=33.1
Q ss_pred eEeCCCccCCCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEe
Q 025756 87 AIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIG 137 (248)
Q Consensus 87 ~v~l~~l~~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is 137 (248)
.+.++.- +.+++|+.|..+|||+|++...+|.+..++ .+++++.+.
T Consensus 89 ~i~~G~~--~ak~~v~~F~D~~Cp~C~~~~~~l~~~~~~---g~v~v~~~~ 134 (241)
T 1v58_A 89 WLLDGKK--DAPVIVYVFADPFCPYCKQFWQQARPWVDS---GKVQLRTLL 134 (241)
T ss_dssp CEEESCT--TCSEEEEEEECTTCHHHHHHHHHHHHHHHT---TSEEEEEEE
T ss_pred CceECCC--CCCeEEEEEECCCChhHHHHHHHHHHHHhC---CcEEEEEEE
Confidence 4555542 467889999999999999999988764432 357766544
No 242
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=92.73 E-value=0.068 Score=41.15 Aligned_cols=42 Identities=12% Similarity=0.256 Sum_probs=26.2
Q ss_pred eEEEEEEcCCCChhhHHHHHHHHhcHHHHH-HCCCEEEEEeCC
Q 025756 98 KAVVAFARHFGCVLCRKRADYLAAKKDVMD-ASGVALVLIGPG 139 (248)
Q Consensus 98 ~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~-~~Gv~vV~Is~~ 139 (248)
..+|+.|...||+.|+..-.++...++.-+ ...+.|+-|..+
T Consensus 19 ~~~LV~F~A~wC~~Ck~~~~~i~~~~~~~a~~~~~~l~~vdv~ 61 (116)
T 3dml_A 19 ELRLLMFEQPGCLYCARWDAEIAPQYPLTDEGRAAPVQRLQMR 61 (116)
T ss_dssp CEEEEEEECTTCHHHHHHHHHTTTTGGGSHHHHHSCEEEEETT
T ss_pred CCEEEEEECCCCHHHHHHHHHHHhhHHHhhhcccceEEEEECC
Confidence 467778888999999988766655544321 112445544444
No 243
>3rdw_A Putative arsenate reductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 2.20A {Yersinia pestis}
Probab=92.69 E-value=0.29 Score=37.53 Aligned_cols=62 Identities=18% Similarity=0.349 Sum_probs=49.1
Q ss_pred EEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEe----CCCHHHHHHHHhhcCC-CC----CCChHHHHHcCCcc
Q 025756 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIG----PGSVEQARTFSEQTKF-KG----DPNHSSYEALSFVS 169 (248)
Q Consensus 101 lvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is----~~~~~~~~~f~~~~~f-p~----Dp~~~~y~alGl~~ 169 (248)
|.+|-..+|+.|++....| ++.|+..-.|- +.+.+.++.+.+..++ +. ......|+.+|+..
T Consensus 7 i~iY~~p~C~~c~ka~~~L-------~~~gi~~~~~di~~~~~~~~eL~~~l~~~g~~~~~~l~n~~~~~~k~l~l~~ 77 (121)
T 3rdw_A 7 VTIYHNPRCSKSRETLALV-------EQQGITPQVVLYLETPPSVDKLKELLQQLGFSDARQLMRTKEDLYKTLNLDD 77 (121)
T ss_dssp CEEECCTTCHHHHHHHHHH-------HTTTCCCEEECTTTSCCCHHHHHHHHHHTTCSSGGGGBCTTSHHHHHTTTTC
T ss_pred EEEEECCCCHHHHHHHHHH-------HHcCCCcEEEeeccCCCcHHHHHHHHHhcCCcCHHHHhcCCChhhhhcCccc
Confidence 6788899999999887766 45666655553 3456889999999988 65 99999999999874
No 244
>3fz4_A Putative arsenate reductase; APC61768, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.38A {Streptococcus mutans UA159} SCOP: c.47.1.0
Probab=92.49 E-value=0.28 Score=37.63 Aligned_cols=63 Identities=22% Similarity=0.347 Sum_probs=49.5
Q ss_pred EEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEe----CCCHHHHHHHHhhcCCCC----CCChHHHHHcCCcc
Q 025756 100 VVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIG----PGSVEQARTFSEQTKFKG----DPNHSSYEALSFVS 169 (248)
Q Consensus 100 vlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is----~~~~~~~~~f~~~~~fp~----Dp~~~~y~alGl~~ 169 (248)
++.+|-..+|+.|++....| ++.|+..-.|- +-+.+.++.+.+..+.+. ......|+.+|+..
T Consensus 4 Mi~iY~~~~C~~c~ka~~~L-------~~~gi~~~~~di~~~~~~~~eL~~~l~~~g~~~~~l~n~~~~~~k~l~l~~ 74 (120)
T 3fz4_A 4 MLTFYEYPKCSTCRRAKAEL-------DDLAWDYDAIDIKKNPPAASLIRNWLENSGLELKKFFNTSGQSYRALGLKD 74 (120)
T ss_dssp SEEEEECSSCHHHHHHHHHH-------HHHTCCEEEEETTTSCCCHHHHHHHHHHSCCCGGGGBCTTSHHHHHTTHHH
T ss_pred eEEEEeCCCChHHHHHHHHH-------HHcCCceEEEEeccCchhHHHHHHHHHHcCCCHHHHhCCCCcchhhcCccc
Confidence 56788899999999877666 45677765554 345678999999888765 99999999999864
No 245
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=92.46 E-value=0.13 Score=41.25 Aligned_cols=41 Identities=20% Similarity=0.161 Sum_probs=30.5
Q ss_pred CCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEe
Q 025756 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIG 137 (248)
Q Consensus 96 ~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is 137 (248)
+.++.|+.|..++||+|......|.+...++.. .+.++.+.
T Consensus 24 ~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~p 64 (193)
T 2rem_A 24 AGKIEVVEIFGYTCPHCAHFDSKLQAWGARQAK-DVRFTLVP 64 (193)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHTSCT-TEEEEEEE
T ss_pred CCCeEEEEEECCCChhHhhhhHHHHHHHHhcCC-ceEEEEeC
Confidence 357788888899999999999999876665532 46655454
No 246
>3l9v_A Putative thiol-disulfide isomerase or thioredoxin; thioredoxin-fold, SRGA, thiol-disulfide oxidoreductase, ISOM oxidoreductase; HET: PE8 P4C P6G; 2.15A {Salmonella enterica subsp} SCOP: c.47.1.0
Probab=92.31 E-value=0.088 Score=42.99 Aligned_cols=42 Identities=29% Similarity=0.407 Sum_probs=28.0
Q ss_pred CCeEEEEEEcCCCChhhHHHHHHH---HhcHHHHHHCCCEEEEEeCC
Q 025756 96 DRKAVVAFARHFGCVLCRKRADYL---AAKKDVMDASGVALVLIGPG 139 (248)
Q Consensus 96 ~~~vvlvF~R~~~Cp~C~~~l~~L---~~~~~~l~~~Gv~vV~Is~~ 139 (248)
..++|+.|| .+|||+|+.....| .+...++. .+++++-+-..
T Consensus 14 ~~~~vvef~-d~~Cp~C~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~ 58 (189)
T 3l9v_A 14 DAPAVVEFF-SFYCPPCYAFSQTMGVDQAIRHVLP-QGSRMVKYHVS 58 (189)
T ss_dssp TCCSEEEEE-CTTCHHHHHHHHTSCHHHHHHTTCC-TTCCEEEEECS
T ss_pred CCCEEEEEE-CCCChhHHHHhHhccchHHHHHhCC-CCCEEEEEech
Confidence 356777777 89999999998875 23333333 25777766543
No 247
>3gkx_A Putative ARSC family related protein; ARSC family protein, structural genomi 2, protein structure initiative; 2.20A {Bacteroides fragilis} SCOP: c.47.1.0
Probab=92.26 E-value=0.25 Score=37.92 Aligned_cols=62 Identities=16% Similarity=0.262 Sum_probs=48.4
Q ss_pred EEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEe----CCCHHHHHHHHhhcCCCC----CCChHHHHHcCCcc
Q 025756 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIG----PGSVEQARTFSEQTKFKG----DPNHSSYEALSFVS 169 (248)
Q Consensus 101 lvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is----~~~~~~~~~f~~~~~fp~----Dp~~~~y~alGl~~ 169 (248)
|.+|-..+|+.|++....| ++.|+..-.|- +.+.+.++.+.+..+++. ......|+.+|+..
T Consensus 6 i~iY~~p~C~~c~ka~~~L-------~~~gi~~~~~di~~~~~~~~eL~~~l~~~g~~~~~l~n~~~~~~k~l~l~~ 75 (120)
T 3gkx_A 6 TLFLQYPACSTCQKAKKWL-------IENNIEYTNRLIVDDNPTVEELKAWIPLSGLPVKKFFNTSGVVYKELKLSS 75 (120)
T ss_dssp CEEEECTTCHHHHHHHHHH-------HHTTCCCEEEETTTTCCCHHHHHHHHHHHTSCGGGGBCTTSHHHHHTTHHH
T ss_pred EEEEECCCChHHHHHHHHH-------HHcCCceEEEecccCcCCHHHHHHHHHHcCCCHHHeEeCCCchhhhcCcch
Confidence 6788899999999887766 45676655553 345678999999888765 89999999999863
No 248
>3f0i_A Arsenate reductase; structural genomics, IDP01300, vibrio CH center for structural genomics of infectious diseases, CSGI oxidoreductase; HET: MSE; 1.88A {Vibrio cholerae}
Probab=92.15 E-value=0.35 Score=37.02 Aligned_cols=62 Identities=21% Similarity=0.273 Sum_probs=49.7
Q ss_pred EEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEE----eCCCHHHHHHHHhhcCCC-C----CCChHHHHHcCCcc
Q 025756 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLI----GPGSVEQARTFSEQTKFK-G----DPNHSSYEALSFVS 169 (248)
Q Consensus 101 lvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~I----s~~~~~~~~~f~~~~~fp-~----Dp~~~~y~alGl~~ 169 (248)
+.+|-..+|+.|++....|. +.|+..-.| .+-+.+.++.+.+..+++ . ......|+.+|+..
T Consensus 6 i~iY~~p~C~~c~ka~~~L~-------~~gi~~~~~di~~~~~t~~eL~~~l~~~g~~~~~~l~n~~~~~~k~l~l~~ 76 (119)
T 3f0i_A 6 VVIYHNPKCSKSRETLALLE-------NQGIAPQVIKYLETSPSVEELKRLYQQLGLNEVRAMMRCKEELYKELNLGD 76 (119)
T ss_dssp CEEECCTTCHHHHHHHHHHH-------HTTCCCEEECHHHHCCCHHHHHHHHHHHTCSSGGGGBCTTSHHHHHTTTTC
T ss_pred EEEEECCCChHHHHHHHHHH-------HcCCceEEEEeccCcCcHHHHHHHHHHcCCccHHHHhcCCCchhhhcCccc
Confidence 56888999999998877664 566665555 345678999999999988 4 99999999999875
No 249
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=91.86 E-value=0.15 Score=41.70 Aligned_cols=41 Identities=15% Similarity=0.075 Sum_probs=30.4
Q ss_pred CCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEe
Q 025756 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIG 137 (248)
Q Consensus 96 ~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is 137 (248)
..+++|+.|..+|||+|+.....|.+...++.. .+.+.-+.
T Consensus 23 ~~~v~vv~f~d~~Cp~C~~~~~~l~~~~~~~~~-~v~~~~~p 63 (193)
T 3hz8_A 23 AGKVEVLEFFGYFCPHCAHLEPVLSKHAKSFKD-DMYLRTEH 63 (193)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHTTCCT-TEEEEEEE
T ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHCCC-CeEEEEec
Confidence 357889999999999999999988777665543 35444443
No 250
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=91.81 E-value=0.35 Score=33.95 Aligned_cols=43 Identities=16% Similarity=0.364 Sum_probs=28.9
Q ss_pred EEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCCHHHHHHHHhhc
Q 025756 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQT 151 (248)
Q Consensus 101 lvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~~~~~~~f~~~~ 151 (248)
+++|...|||+|++....|. +.|+....|..+ .+...++.+.+
T Consensus 8 v~~y~~~~C~~C~~~~~~L~-------~~~i~~~~vdv~-~~~~~~l~~~~ 50 (89)
T 2klx_A 8 IILYTRPNCPYCKRARDLLD-------KKGVKYTDIDAS-TSLRQEMVQRA 50 (89)
T ss_dssp EEEESCSCCTTTHHHHHHHH-------HHTCCEEEECSC-HHHHHHHHHHH
T ss_pred EEEEECCCChhHHHHHHHHH-------HcCCCcEEEECC-HHHHHHHHHHh
Confidence 55678899999997665554 456777777776 44445555544
No 251
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=91.16 E-value=0.27 Score=46.40 Aligned_cols=43 Identities=12% Similarity=0.094 Sum_probs=33.7
Q ss_pred CeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCCH
Q 025756 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV 141 (248)
Q Consensus 97 ~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~~ 141 (248)
.++.|.+|...||++|+...+.|.+...+.. ++.+..|..+..
T Consensus 117 ~~~~i~~f~a~~C~~C~~~~~~l~~~a~~~~--~v~~~~vd~~~~ 159 (521)
T 1hyu_A 117 GDFEFETYYSLSCHNCPDVVQALNLMAVLNP--RIKHTAIDGGTF 159 (521)
T ss_dssp SCEEEEEEECTTCSSHHHHHHHHHHHHHHCT--TEEEEEEETTTC
T ss_pred CCcceEEEECCCCcCcHHHHHHHHHHHhHcC--ceEEEEEechhh
Confidence 5788999999999999999888887755543 677777776543
No 252
>1s3c_A Arsenate reductase; ARSC, arsenite, oxidoreductase; 1.25A {Escherichia coli} PDB: 1sd9_A 1i9d_A 1j9b_A 1sd8_A 1jzw_A* 1sk1_A* 1sjz_A* 1sk0_A* 1sk2_A 1s3d_A
Probab=90.69 E-value=0.52 Score=37.18 Aligned_cols=63 Identities=14% Similarity=0.134 Sum_probs=49.1
Q ss_pred EEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCC----CHHHHHHHHhhcCCCC----CCChHHHHHcCCccc
Q 025756 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG----SVEQARTFSEQTKFKG----DPNHSSYEALSFVSG 170 (248)
Q Consensus 101 lvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~----~~~~~~~f~~~~~fp~----Dp~~~~y~alGl~~~ 170 (248)
|.+|-..+|+.|++....| ++.|+..-.|-.. +.+.++++.+..++|. ......|+.+|+...
T Consensus 4 itiY~~p~C~~crkak~~L-------~~~gi~~~~idi~~~~~~~~eL~~~~~~~g~p~~~l~n~~~~~yk~l~l~~~ 74 (141)
T 1s3c_A 4 ITIYHNPASGTSRNTLEMI-------RNSGTEPTIILYLENPPSRDELVKLIADMGISVRALLRKNVEPYEQLGLAED 74 (141)
T ss_dssp CEEECCTTCHHHHHHHHHH-------HHTTCCCEEECTTTSCCCHHHHHHHHHHHTSCHHHHBCSSSHHHHHTTTTSS
T ss_pred EEEEECCCChHHHHHHHHH-------HHcCCCEEEEECCCCCccHHHHHHHhcccCCCHHHhccCCchhHHhcCCccc
Confidence 5678899999999877665 5567776556543 4578889998888886 999999999998753
No 253
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=90.66 E-value=0.68 Score=34.15 Aligned_cols=53 Identities=15% Similarity=0.194 Sum_probs=32.5
Q ss_pred CccCCCeEEEEEEcC----CCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCCHHH-HHHHHhhcC
Q 025756 92 DLWKDRKAVVAFARH----FGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQ-ARTFSEQTK 152 (248)
Q Consensus 92 ~l~~~~~vvlvF~R~----~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~~~~-~~~f~~~~~ 152 (248)
++....+ |++|..+ .|||+|++...-|. +.|+....|..+.... .+.+.+.++
T Consensus 10 ~~i~~~~-vvvy~~g~~~~~~Cp~C~~ak~~L~-------~~~i~~~~vdi~~~~~~~~~l~~~~g 67 (109)
T 1wik_A 10 VLTNKAS-VMLFMKGNKQEAKCGFSKQILEILN-------STGVEYETFDILEDEEVRQGLKTFSN 67 (109)
T ss_dssp HHHTTSS-EEEEESSTTTCCCSSTHHHHHHHHH-------HTCSCEEEEESSSCHHHHHHHHHHHS
T ss_pred HHhccCC-EEEEEecCCCCCCCchHHHHHHHHH-------HcCCCeEEEECCCCHHHHHHHHHHhC
Confidence 3444455 5566665 89999997766654 4577777777764333 334444333
No 254
>1z3e_A Regulatory protein SPX; bacterial transcription regulation, disulfide stress; 1.50A {Bacillus subtilis} SCOP: c.47.1.12 PDB: 3gfk_A 3ihq_A
Probab=90.63 E-value=0.89 Score=35.04 Aligned_cols=62 Identities=16% Similarity=0.246 Sum_probs=45.9
Q ss_pred EEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCC----CHHHHHHHHhhcCCCC----CCChHHHHHcCCcc
Q 025756 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG----SVEQARTFSEQTKFKG----DPNHSSYEALSFVS 169 (248)
Q Consensus 101 lvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~----~~~~~~~f~~~~~fp~----Dp~~~~y~alGl~~ 169 (248)
|.+|-..+|+.|++....|. +.|+....|... +.+.++++.+..+.+. ......|+.+|+..
T Consensus 3 i~lY~~~~C~~C~ka~~~L~-------~~gi~y~~~di~~~~~~~~el~~~l~~~~~~~~~l~n~~~~~~k~l~~~~ 72 (132)
T 1z3e_A 3 VTLYTSPSCTSCRKARAWLE-------EHEIPFVERNIFSEPLSIDEIKQILRMTEDGTDEIISTRSKVFQKLNVNV 72 (132)
T ss_dssp EEEEECTTCHHHHHHHHHHH-------HTTCCEEEEETTTSCCCHHHHHHHHHTCSSCGGGTBCTTSHHHHHHCCCG
T ss_pred EEEEeCCCChHHHHHHHHHH-------HcCCceEEEEccCCCccHHHHHHHHHHcCCCHHHhhcCCchHHHhcCccc
Confidence 56788899999998776664 467776665543 3367888887666654 89999999999753
No 255
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=90.02 E-value=0.49 Score=32.19 Aligned_cols=44 Identities=14% Similarity=0.307 Sum_probs=26.0
Q ss_pred EEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCC-HHHHHHHHhhc
Q 025756 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS-VEQARTFSEQT 151 (248)
Q Consensus 101 lvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~-~~~~~~f~~~~ 151 (248)
|.+|-..|||+|++....|.+ .|+.+..|..+. .+...++.+.+
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~-------~~i~~~~~~i~~~~~~~~~~~~~~ 47 (82)
T 1fov_A 3 VEIYTKETCPYCHRAKALLSS-------KGVSFQELPIDGNAAKREEMIKRS 47 (82)
T ss_dssp EEEEECSSCHHHHHHHHHHHH-------HTCCCEEEECTTCSHHHHHHHHHH
T ss_pred EEEEECCCChhHHHHHHHHHH-------CCCCcEEEECCCCHHHHHHHHHHh
Confidence 345667899999977666543 456555555543 23334455444
No 256
>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*
Probab=89.92 E-value=0.41 Score=36.05 Aligned_cols=32 Identities=9% Similarity=0.237 Sum_probs=20.8
Q ss_pred EEEEcCCCChhhHHH-HHHHHhcHHHHHHCC---CEEEEEeCC
Q 025756 101 VAFARHFGCVLCRKR-ADYLAAKKDVMDASG---VALVLIGPG 139 (248)
Q Consensus 101 lvF~R~~~Cp~C~~~-l~~L~~~~~~l~~~G---v~vV~Is~~ 139 (248)
|++|...|||+|+.. ... |++.| +....|..+
T Consensus 27 Vvvf~~~~Cp~C~~alk~~-------L~~~~~~~i~~~~vdid 62 (118)
T 3c1r_A 27 IFVASKTYCPYCHAALNTL-------FEKLKVPRSKVLVLQLN 62 (118)
T ss_dssp EEEEECSSCHHHHHHHHHH-------HTTSCCCGGGEEEEEGG
T ss_pred EEEEEcCCCcCHHHHHHHH-------HHHcCCCCCCeEEEECc
Confidence 344777999999976 333 34455 666666554
No 257
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=89.91 E-value=0.36 Score=35.88 Aligned_cols=32 Identities=19% Similarity=0.389 Sum_probs=21.0
Q ss_pred EEEEcCCCChhhHHHHHHHHhcHHHHHHCCCE---EEEEeCC
Q 025756 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVA---LVLIGPG 139 (248)
Q Consensus 101 lvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~---vV~Is~~ 139 (248)
|++|...|||+|++....|. +.|+. +..|..+
T Consensus 21 vv~f~~~~Cp~C~~~~~~L~-------~~~~~~~~~~~vdi~ 55 (114)
T 2hze_A 21 VTIFVKYTCPFCRNALDILN-------KFSFKRGAYEIVDIK 55 (114)
T ss_dssp EEEEECTTCHHHHHHHHHHT-------TSCBCTTSEEEEEGG
T ss_pred EEEEEeCCChhHHHHHHHHH-------HcCCCcCceEEEEcc
Confidence 44467899999997666554 44555 5555544
No 258
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=89.78 E-value=0.67 Score=32.51 Aligned_cols=44 Identities=23% Similarity=0.375 Sum_probs=28.0
Q ss_pred EEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCC-HHHHHHHHhhc
Q 025756 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS-VEQARTFSEQT 151 (248)
Q Consensus 101 lvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~-~~~~~~f~~~~ 151 (248)
+++|-..|||+|++....|. +.|+.+..|..+. .+..+++.+.+
T Consensus 8 v~ly~~~~C~~C~~~~~~L~-------~~~i~~~~~di~~~~~~~~~l~~~~ 52 (92)
T 2khp_A 8 VIIYTRPGCPYCARAKALLA-------RKGAEFNEIDASATPELRAEMQERS 52 (92)
T ss_dssp EEEEECTTCHHHHHHHHHHH-------HTTCCCEEEESTTSHHHHHHHHHHH
T ss_pred EEEEECCCChhHHHHHHHHH-------HcCCCcEEEECCCCHHHHHHHHHHh
Confidence 45667899999997655554 4567766666664 33344555544
No 259
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=89.61 E-value=0.45 Score=35.10 Aligned_cols=21 Identities=14% Similarity=0.289 Sum_probs=15.2
Q ss_pred EEEEcCCCChhhHHHHHHHHh
Q 025756 101 VAFARHFGCVLCRKRADYLAA 121 (248)
Q Consensus 101 lvF~R~~~Cp~C~~~l~~L~~ 121 (248)
|++|...|||+|++...-|.+
T Consensus 21 v~vy~~~~Cp~C~~~~~~L~~ 41 (113)
T 3rhb_A 21 VVIYSKTWCSYCTEVKTLFKR 41 (113)
T ss_dssp EEEEECTTCHHHHHHHHHHHH
T ss_pred EEEEECCCChhHHHHHHHHHH
Confidence 444677999999976665544
No 260
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=89.56 E-value=0.25 Score=35.72 Aligned_cols=21 Identities=29% Similarity=0.523 Sum_probs=15.5
Q ss_pred EEEEcCCCChhhHHHHHHHHh
Q 025756 101 VAFARHFGCVLCRKRADYLAA 121 (248)
Q Consensus 101 lvF~R~~~Cp~C~~~l~~L~~ 121 (248)
|++|...|||+|+.....|.+
T Consensus 14 v~~f~~~~C~~C~~~~~~L~~ 34 (105)
T 1kte_A 14 VVVFIKPTCPFCRKTQELLSQ 34 (105)
T ss_dssp EEEEECSSCHHHHHHHHHHHH
T ss_pred EEEEEcCCCHhHHHHHHHHHH
Confidence 344668999999987666654
No 261
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=89.47 E-value=0.26 Score=35.50 Aligned_cols=22 Identities=23% Similarity=0.484 Sum_probs=17.2
Q ss_pred EEEEcCCCChhhHHHHHHHHhc
Q 025756 101 VAFARHFGCVLCRKRADYLAAK 122 (248)
Q Consensus 101 lvF~R~~~Cp~C~~~l~~L~~~ 122 (248)
|+.|...||++|+.....|.+.
T Consensus 3 vv~f~a~~C~~C~~~~~~L~~~ 24 (87)
T 1ttz_A 3 LTLYQRDDCHLCDQAVEALAQA 24 (87)
T ss_dssp EEEEECSSCHHHHHHHHHHHHT
T ss_pred EEEEECCCCchHHHHHHHHHHH
Confidence 6678899999999777666543
No 262
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=89.46 E-value=1.1 Score=43.49 Aligned_cols=36 Identities=14% Similarity=0.143 Sum_probs=28.8
Q ss_pred CccccCcCCCcEEec-CCCCeEeCCCccC--CCeEEEEE
Q 025756 68 SEDTKNLLDTVKVYD-VNGNAIPISDLWK--DRKAVVAF 103 (248)
Q Consensus 68 ~~~~g~~ap~f~L~d-~~G~~v~l~~l~~--~~~vvlvF 103 (248)
...+|..+|++.|.. .+|+++.|.+++. ++.+||+|
T Consensus 466 ~~~~G~r~p~~~~~~~~~g~~~~l~~~~~~~g~~~ll~~ 504 (639)
T 2dkh_A 466 GFTVGMRFHSAPVVRVCDAKPVQLGHCGKADGRWRLYAF 504 (639)
T ss_dssp TSCTTSBCCCCEEEETTTCCEEEGGGGCCSSSCEEEEEE
T ss_pred CCCCcCCCCCCeEEecCCCCEEEHHHhhccCCCEEEEEe
Confidence 356899999999976 4899999999885 45666665
No 263
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=89.45 E-value=0.96 Score=36.01 Aligned_cols=60 Identities=15% Similarity=0.153 Sum_probs=39.5
Q ss_pred CeEEEEEEcCCCChhhHHHHHHHHh---cHHHHHHCCCEEEEEeCCCHHHHHHHHhhcC---CCC----CCC
Q 025756 97 RKAVVAFARHFGCVLCRKRADYLAA---KKDVMDASGVALVLIGPGSVEQARTFSEQTK---FKG----DPN 158 (248)
Q Consensus 97 ~~vvlvF~R~~~Cp~C~~~l~~L~~---~~~~l~~~Gv~vV~Is~~~~~~~~~f~~~~~---fp~----Dp~ 158 (248)
++.|++.|-..||+.|+..-++.-. ..+.+ ..+..+|-|..++.+ ..++.+.++ +|. |++
T Consensus 42 ~K~vlvd~~a~wC~~C~~me~~vf~d~~V~~~l-~~~fv~v~~d~~~~~-~~~l~~~y~v~~~P~~~fld~~ 111 (153)
T 2dlx_A 42 NKWLMINIQNVQDFACQCLNRDVWSNEAVKNII-REHFIFWQVYHDSEE-GQRYIQFYKLGDFPYVSILDPR 111 (153)
T ss_dssp TCEEEEEEECSCTTTHHHHHHHTTTCHHHHHHH-HHTEEEEEEESSSHH-HHHHHHHHTCCSSSEEEEECTT
T ss_pred CCeEEEEEECCCCHhHHHHHHHhcCCHHHHHHH-HcCeEEEEEecCCHh-HHHHHHHcCCCCCCEEEEEeCC
Confidence 4566777778899999988766532 23333 346777888777653 345555554 775 887
No 264
>2kok_A Arsenate reductase; brucellosis, zoonotic, oxidoreductase, S genomics, seattle structural genomics center for infectious ssgcid; NMR {Brucella abortus}
Probab=88.99 E-value=0.97 Score=34.24 Aligned_cols=62 Identities=13% Similarity=0.161 Sum_probs=46.1
Q ss_pred EEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeC----CCHHHHHHHHhhcCCCC--CCChHHHHHcCCcc
Q 025756 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGP----GSVEQARTFSEQTKFKG--DPNHSSYEALSFVS 169 (248)
Q Consensus 101 lvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~----~~~~~~~~f~~~~~fp~--Dp~~~~y~alGl~~ 169 (248)
|.+|-..+|+.|++....|.+ .|+....|-. .+.+.++++.++.++.- ......|+.+|+..
T Consensus 7 i~iY~~~~C~~C~ka~~~L~~-------~gi~y~~~di~~~~~~~~~l~~~~~~~g~~~l~n~~~~~~k~l~~~~ 74 (120)
T 2kok_A 7 VTIYGIKNCDTMKKARIWLED-------HGIDYTFHDYKKEGLDAETLDRFLKTVPWEQLLNRAGTTFRKLPEDV 74 (120)
T ss_dssp EEEEECSSCHHHHHHHHHHHH-------HTCCEEEEEHHHHCCCHHHHHHHHHHSCGGGTBCSSSHHHHHSCHHH
T ss_pred EEEEECCCChHHHHHHHHHHH-------cCCcEEEEeeeCCCCCHHHHHHHHHHcChHhhccCCchhhHhcCchh
Confidence 667888999999987776654 5666555543 34478888888888543 99999999999764
No 265
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=88.49 E-value=0.52 Score=34.38 Aligned_cols=34 Identities=12% Similarity=0.116 Sum_probs=22.8
Q ss_pred EEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCCH
Q 025756 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV 141 (248)
Q Consensus 101 lvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~~ 141 (248)
|..|-..|||+|.+.-.- |++.|+...-|..+..
T Consensus 6 I~vYs~~~Cp~C~~aK~~-------L~~~gi~y~~idi~~d 39 (92)
T 2lqo_A 6 LTIYTTSWCGYCLRLKTA-------LTANRIAYDEVDIEHN 39 (92)
T ss_dssp EEEEECTTCSSHHHHHHH-------HHHTTCCCEEEETTTC
T ss_pred EEEEcCCCCHhHHHHHHH-------HHhcCCceEEEEcCCC
Confidence 455778999999965444 3556777666666543
No 266
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=88.15 E-value=0.76 Score=33.58 Aligned_cols=35 Identities=14% Similarity=0.197 Sum_probs=23.4
Q ss_pred EEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCCH
Q 025756 100 VVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV 141 (248)
Q Consensus 100 vlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~~ 141 (248)
-|.+|...|||+|++...-|.+ .|+....|-.+..
T Consensus 17 ~v~vy~~~~Cp~C~~ak~~L~~-------~~i~y~~idI~~~ 51 (99)
T 3qmx_A 17 KIEIYTWSTCPFCMRALALLKR-------KGVEFQEYCIDGD 51 (99)
T ss_dssp CEEEEECTTCHHHHHHHHHHHH-------HTCCCEEEECTTC
T ss_pred CEEEEEcCCChhHHHHHHHHHH-------CCCCCEEEEcCCC
Confidence 3456788999999987766654 4555555555443
No 267
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=88.09 E-value=0.86 Score=40.22 Aligned_cols=42 Identities=5% Similarity=0.065 Sum_probs=35.0
Q ss_pred CeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCC
Q 025756 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG 139 (248)
Q Consensus 97 ~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~ 139 (248)
.+.++++|...||+.|++.+..|.+...+++.. +.++.|.++
T Consensus 135 ~~~~~v~F~~~~~~~~~~~~~~~~~~A~~~~~~-i~f~~vd~~ 176 (361)
T 3uem_A 135 IKTHILLFLPKSVSDYDGKLSNFKTAAESFKGK-ILFIFIDSD 176 (361)
T ss_dssp CCEEEEEECCSSSSSHHHHHHHHHHHHGGGTTT-CEEEEECTT
T ss_pred CCcEEEEEEeCCchhHHHHHHHHHHHHHHccCc-eEEEEecCC
Confidence 346667777899999999999999999998754 888888887
No 268
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=87.96 E-value=0.63 Score=36.76 Aligned_cols=36 Identities=17% Similarity=0.279 Sum_probs=27.9
Q ss_pred CCCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEE
Q 025756 95 KDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLI 136 (248)
Q Consensus 95 ~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~I 136 (248)
++.++.|+.|-.++||+|++....|.+. .+++|+.+
T Consensus 12 ~~a~~~vv~f~D~~Cp~C~~~~~~l~~l------~~v~v~~~ 47 (147)
T 3gv1_A 12 GNGKLKVAVFSDPDCPFCKRLEHEFEKM------TDVTVYSF 47 (147)
T ss_dssp TTCCEEEEEEECTTCHHHHHHHHHHTTC------CSEEEEEE
T ss_pred CCCCEEEEEEECCCChhHHHHHHHHhhc------CceEEEEE
Confidence 3568888999999999999999888654 34666654
No 269
>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A
Probab=87.41 E-value=1.9 Score=30.11 Aligned_cols=32 Identities=13% Similarity=0.082 Sum_probs=21.4
Q ss_pred EEEEcCC----CChhhHHHHHHHHhcHHHHHHCCCEEEEEeCC
Q 025756 101 VAFARHF----GCVLCRKRADYLAAKKDVMDASGVALVLIGPG 139 (248)
Q Consensus 101 lvF~R~~----~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~ 139 (248)
|.+|-.. |||+|++...-| ++.|+..-.|..+
T Consensus 2 v~iY~~~~~~~~Cp~C~~ak~~L-------~~~gi~y~~idI~ 37 (87)
T 1aba_A 2 FKVYGYDSNIHKCGPCDNAKRLL-------TVKKQPFEFINIM 37 (87)
T ss_dssp EEEEECCTTTSCCHHHHHHHHHH-------HHTTCCEEEEESC
T ss_pred EEEEEeCCCCCcCccHHHHHHHH-------HHcCCCEEEEEee
Confidence 3455667 999998765554 4567776666665
No 270
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=87.18 E-value=0.67 Score=33.84 Aligned_cols=39 Identities=15% Similarity=0.240 Sum_probs=23.5
Q ss_pred ccCCCeEEEEEEc----CCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCC
Q 025756 93 LWKDRKAVVAFAR----HFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG 139 (248)
Q Consensus 93 l~~~~~vvlvF~R----~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~ 139 (248)
+.+..++ ++|+. ..|||+|+....-|.+ .|+....|..+
T Consensus 13 ~i~~~~v-vvf~~g~~~~~~C~~C~~~~~~L~~-------~~i~~~~vdi~ 55 (105)
T 2yan_A 13 LTNKASV-MLFMKGNKQEAKCGFSKQILEILNS-------TGVEYETFDIL 55 (105)
T ss_dssp HHTSSSE-EEEESBCSSSBCTTHHHHHHHHHHH-------HTCCCEEEEGG
T ss_pred HhccCCE-EEEEecCCCCCCCccHHHHHHHHHH-------CCCCeEEEECC
Confidence 3444454 44665 2899999976665543 45665555554
No 271
>1rw1_A Conserved hypothetical protein YFFB; thioredoxin fold, structure 2 function project, S2F, structu genomics, unknown function; HET: MSE IPA; 1.02A {Pseudomonas aeruginosa} SCOP: c.47.1.12
Probab=86.62 E-value=0.53 Score=35.40 Aligned_cols=62 Identities=13% Similarity=0.175 Sum_probs=45.7
Q ss_pred EEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCC----CHHHHHHHHhhcCCCC--CCChHHHHHcCCcc
Q 025756 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG----SVEQARTFSEQTKFKG--DPNHSSYEALSFVS 169 (248)
Q Consensus 101 lvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~----~~~~~~~f~~~~~fp~--Dp~~~~y~alGl~~ 169 (248)
|.+|-..+|+.|++....|. +.|+....|-.. +.+.+++|.++.++.- ......|+.+|+..
T Consensus 2 i~iY~~~~C~~C~kak~~L~-------~~gi~~~~~di~~~~~~~~~l~~~~~~~g~~~l~n~~~~~~k~l~~~~ 69 (114)
T 1rw1_A 2 YVLYGIKACDTMKKARTWLD-------EHKVAYDFHDYKAVGIDREHLRRWCAEHGWQTVLNRAGTTFRKLDEAQ 69 (114)
T ss_dssp EEEEECSSCHHHHHHHHHHH-------HTTCCEEEEEHHHHCCCHHHHHHHHHHHCHHHHBCTTSHHHHTSCHHH
T ss_pred EEEEECCCChHHHHHHHHHH-------HCCCceEEEeecCCCCCHHHHHHHHHhCChHHhccCCcHhHHhcCccc
Confidence 45677899999997776664 567776555433 3478888988877433 88899999999764
No 272
>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A*
Probab=86.60 E-value=0.91 Score=34.86 Aligned_cols=19 Identities=21% Similarity=0.418 Sum_probs=13.4
Q ss_pred EEEEcCCCChhhHHH-HHHH
Q 025756 101 VAFARHFGCVLCRKR-ADYL 119 (248)
Q Consensus 101 lvF~R~~~Cp~C~~~-l~~L 119 (248)
|++|...|||+|++. ...|
T Consensus 39 Vvvy~~~~Cp~C~~a~k~~L 58 (129)
T 3ctg_A 39 VFVAAKTYCPYCKATLSTLF 58 (129)
T ss_dssp EEEEECTTCHHHHHHHHHHH
T ss_pred EEEEECCCCCchHHHHHHHH
Confidence 345667999999977 4444
No 273
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=86.59 E-value=1.1 Score=34.18 Aligned_cols=36 Identities=14% Similarity=0.243 Sum_probs=22.9
Q ss_pred CCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCC
Q 025756 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS 140 (248)
Q Consensus 96 ~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~ 140 (248)
..+++| |...|||+|+.....|.+ .|+....|-.+.
T Consensus 26 ~~~vvv--f~~~~Cp~C~~~~~~L~~-------~~i~~~~vdid~ 61 (130)
T 2cq9_A 26 DNCVVI--FSKTSCSYCTMAKKLFHD-------MNVNYKVVELDL 61 (130)
T ss_dssp HSSEEE--EECSSCSHHHHHHHHHHH-------HTCCCEEEETTT
T ss_pred CCcEEE--EEcCCChHHHHHHHHHHH-------cCCCcEEEECcC
Confidence 344443 678999999987666554 355555555553
No 274
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=85.75 E-value=0.21 Score=41.39 Aligned_cols=40 Identities=20% Similarity=0.197 Sum_probs=26.1
Q ss_pred EEEEEEcCCCChhhHHHHHHH---HhcHHHHHHCCCEEEEEeCC
Q 025756 99 AVVAFARHFGCVLCRKRADYL---AAKKDVMDASGVALVLIGPG 139 (248)
Q Consensus 99 vvlvF~R~~~Cp~C~~~l~~L---~~~~~~l~~~Gv~vV~Is~~ 139 (248)
.+|+-|..+|||+|+.....| .+...++. .++.++-+-.+
T Consensus 115 ~~vveFf~~~C~~C~~~~p~~~~~~~l~~~~~-~~v~~~~~~v~ 157 (197)
T 1un2_A 115 PQVLEFFSFFCPHCYQFEEVLHISDNVKKKLP-EGVKMTKYHVN 157 (197)
T ss_dssp CSEEEEECTTCHHHHHHHHTSCHHHHHTTSSC-TTCCEEEEECS
T ss_pred CEEEEEECCCChhHHHhCcccccHHHHHHHCC-CCCEEEEeccC
Confidence 445555559999999998776 55555443 35666666543
No 275
>3gn3_A Putative protein-disulfide isomerase; MCSG, PSI, structural GEN protein structure initiative, midwest center for structural genomics; 2.50A {Pseudomonas syringae PV}
Probab=85.35 E-value=0.65 Score=37.82 Aligned_cols=43 Identities=9% Similarity=-0.066 Sum_probs=32.0
Q ss_pred CCCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEe
Q 025756 95 KDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIG 137 (248)
Q Consensus 95 ~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is 137 (248)
++.|+.|+.|--+.||+|.+....+.+...+...-.+++|..-
T Consensus 12 g~a~vtiv~f~D~~Cp~C~~~~~~~~~~l~~~~~g~v~~v~r~ 54 (182)
T 3gn3_A 12 GHGPRLFEVFLEPTCPFSVKAFFKLDDLLAQAGEDNVTVRIRL 54 (182)
T ss_dssp ECCSEEEEEEECTTCHHHHHHHTTHHHHHHHHCTTTEEEEEEE
T ss_pred CCCCEEEEEEECCCCHhHHHHHHHHHHHHHHhCCCCEEEEEEE
Confidence 3578999999999999999998888776554422346766543
No 276
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=85.25 E-value=1.1 Score=31.41 Aligned_cols=21 Identities=19% Similarity=0.460 Sum_probs=15.7
Q ss_pred EEEEcCCCChhhHHHHHHHHh
Q 025756 101 VAFARHFGCVLCRKRADYLAA 121 (248)
Q Consensus 101 lvF~R~~~Cp~C~~~l~~L~~ 121 (248)
|.+|...|||+|++....|.+
T Consensus 14 v~ly~~~~Cp~C~~~~~~L~~ 34 (92)
T 3ic4_A 14 VLMYGLSTCPHCKRTLEFLKR 34 (92)
T ss_dssp SEEEECTTCHHHHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHH
Confidence 556778999999986665544
No 277
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=84.92 E-value=0.63 Score=33.86 Aligned_cols=21 Identities=29% Similarity=0.493 Sum_probs=16.2
Q ss_pred EEEEcCCCChhhHHHHHHHHh
Q 025756 101 VAFARHFGCVLCRKRADYLAA 121 (248)
Q Consensus 101 lvF~R~~~Cp~C~~~l~~L~~ 121 (248)
|.+|...|||+|++....|.+
T Consensus 24 v~ly~~~~Cp~C~~ak~~L~~ 44 (103)
T 3nzn_A 24 VIMYGLSTCVWCKKTKKLLTD 44 (103)
T ss_dssp EEEEECSSCHHHHHHHHHHHH
T ss_pred EEEEcCCCCchHHHHHHHHHH
Confidence 455788999999987766654
No 278
>2wci_A Glutaredoxin-4; redox-active center, iron-sulfur cluster scaffolder, Fe2S2, homodimer, transport, glutathione, thioredoxin fold; HET: GSH; 1.90A {Escherichia coli} PDB: 1yka_A
Probab=84.85 E-value=1.5 Score=34.21 Aligned_cols=46 Identities=11% Similarity=0.209 Sum_probs=27.3
Q ss_pred EEEEEcC----CCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCC-CHHHHHHHHhhcC
Q 025756 100 VVAFARH----FGCVLCRKRADYLAAKKDVMDASGVALVLIGPG-SVEQARTFSEQTK 152 (248)
Q Consensus 100 vlvF~R~----~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~-~~~~~~~f~~~~~ 152 (248)
|++|..+ .|||+|++-..-|.+ .|+....|..+ +++..+.+.+..+
T Consensus 37 Vvvy~ks~~~~~~Cp~C~~ak~~L~~-------~gv~y~~vdI~~d~~~~~~L~~~~G 87 (135)
T 2wci_A 37 ILLYMKGSPKLPSCGFSAQAVQALAA-------CGERFAYVDILQNPDIRAELPKYAN 87 (135)
T ss_dssp EEEEESBCSSSBSSHHHHHHHHHHHT-------TCSCCEEEEGGGCHHHHHHHHHHHT
T ss_pred EEEEEEecCCCCCCccHHHHHHHHHH-------cCCceEEEECCCCHHHHHHHHHHHC
Confidence 5556665 799999977666644 46665556554 3333344444333
No 279
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=83.52 E-value=2.3 Score=33.24 Aligned_cols=40 Identities=20% Similarity=0.276 Sum_probs=27.0
Q ss_pred CCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEe
Q 025756 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIG 137 (248)
Q Consensus 96 ~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is 137 (248)
+.++|+-|+ -+.||+|+..-..+.+...++.+ ++.++.+.
T Consensus 21 ~~~~vvEf~-dy~Cp~C~~~~~~~~~l~~~~~~-~~~~~~~~ 60 (184)
T 4dvc_A 21 SSPVVSEFF-SFYCPHCNTFEPIIAQLKQQLPE-GAKFQKNH 60 (184)
T ss_dssp SSCEEEEEE-CTTCHHHHHHHHHHHHHHHTSCT-TCEEEEEE
T ss_pred CCCEEEEEE-CCCCHhHHHHhHHHHHHHhhcCC-ceEEEEEe
Confidence 456777776 69999999987777666555532 45555443
No 280
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=83.10 E-value=1.6 Score=34.23 Aligned_cols=28 Identities=14% Similarity=0.306 Sum_probs=18.4
Q ss_pred CccCCCeEEEEEEcCCCChhhHHHHHHHHh
Q 025756 92 DLWKDRKAVVAFARHFGCVLCRKRADYLAA 121 (248)
Q Consensus 92 ~l~~~~~vvlvF~R~~~Cp~C~~~l~~L~~ 121 (248)
++....+++| |...|||+|+.....|.+
T Consensus 44 ~~i~~~~Vvv--f~~~~Cp~C~~~k~~L~~ 71 (146)
T 2ht9_A 44 ETISDNCVVI--FSKTSCSYCTMAKKLFHD 71 (146)
T ss_dssp HHHHHCSEEE--EECTTCHHHHHHHHHHHH
T ss_pred HHhcCCCEEE--EECCCChhHHHHHHHHHH
Confidence 3443444433 778999999987666654
No 281
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=82.87 E-value=2.7 Score=31.11 Aligned_cols=35 Identities=11% Similarity=0.200 Sum_probs=21.7
Q ss_pred CCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCC
Q 025756 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG 139 (248)
Q Consensus 96 ~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~ 139 (248)
..+++| |-..|||+|++-..-|.+ .|+..-.|-.+
T Consensus 16 ~~~v~v--y~~~~Cp~C~~ak~~L~~-------~~i~~~~~dvd 50 (114)
T 3h8q_A 16 RSRVVI--FSKSYCPHSTRVKELFSS-------LGVECNVLELD 50 (114)
T ss_dssp HCSEEE--EECTTCHHHHHHHHHHHH-------TTCCCEEEETT
T ss_pred cCCEEE--EEcCCCCcHHHHHHHHHH-------cCCCcEEEEec
Confidence 344443 667999999876665544 45555555544
No 282
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=82.17 E-value=1.1 Score=30.82 Aligned_cols=20 Identities=20% Similarity=0.429 Sum_probs=15.1
Q ss_pred EEEEEcCCCChhhHHHHHHH
Q 025756 100 VVAFARHFGCVLCRKRADYL 119 (248)
Q Consensus 100 vlvF~R~~~Cp~C~~~l~~L 119 (248)
.|.+|-..|||+|++....|
T Consensus 5 ~v~ly~~~~Cp~C~~~~~~L 24 (89)
T 3msz_A 5 KVKIYTRNGCPYCVWAKQWF 24 (89)
T ss_dssp CEEEEECTTCHHHHHHHHHH
T ss_pred EEEEEEcCCChhHHHHHHHH
Confidence 36677888999999765544
No 283
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=81.92 E-value=1.1 Score=33.94 Aligned_cols=43 Identities=7% Similarity=-0.001 Sum_probs=31.4
Q ss_pred eEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCCHH
Q 025756 98 KAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVE 142 (248)
Q Consensus 98 ~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~~~ 142 (248)
..|+++|+.. |..|+.....|.+...+++.. +.++-|..+...
T Consensus 24 ~pv~v~f~a~-~~~c~~~~p~l~~~A~~~~gk-~~f~~vd~d~~~ 66 (133)
T 2djk_A 24 IPLAYIFAET-AEERKELSDKLKPIAEAQRGV-INFGTIDAKAFG 66 (133)
T ss_dssp SCEEEEECSC-SSSHHHHHHHHHHHHHSSTTT-SEEEEECTTTTG
T ss_pred CCEEEEEecC-hhhHHHHHHHHHHHHHHhCCe-EEEEEEchHHhH
Confidence 3456667777 889998888888887777533 777777766543
No 284
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=81.70 E-value=0.7 Score=37.45 Aligned_cols=36 Identities=17% Similarity=0.342 Sum_probs=25.1
Q ss_pred CeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEE
Q 025756 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLI 136 (248)
Q Consensus 97 ~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~I 136 (248)
+++||-|| .+|||+|+.....|.+...++ ++.++-+
T Consensus 23 ~~~vvef~-d~~Cp~C~~~~~~~~~~~~~~---~v~~~~~ 58 (185)
T 3feu_A 23 MAPVTEVF-ALSCGHCRNMENFLPVISQEA---GTDIGKM 58 (185)
T ss_dssp CCSEEEEE-CTTCHHHHHHGGGHHHHHHHH---TSCCEEE
T ss_pred CCEEEEEE-CCCChhHHHhhHHHHHHHHHh---CCeEEEE
Confidence 45555555 699999999988887777666 4554433
No 285
>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}
Probab=80.21 E-value=3.4 Score=31.23 Aligned_cols=42 Identities=21% Similarity=0.220 Sum_probs=25.4
Q ss_pred EEEEEEcC----CCChhhHHHHHHHHhcHHHHHHCCCE---EEEEeCCCHHHHHHH
Q 025756 99 AVVAFARH----FGCVLCRKRADYLAAKKDVMDASGVA---LVLIGPGSVEQARTF 147 (248)
Q Consensus 99 vvlvF~R~----~~Cp~C~~~l~~L~~~~~~l~~~Gv~---vV~Is~~~~~~~~~f 147 (248)
-|++|-.. .|||+|++-..-|.+ .|+. ...+..+....+++.
T Consensus 17 ~Vvvfsk~t~~~p~Cp~C~~ak~lL~~-------~gv~~~~~~~~dv~~~~~~~~~ 65 (121)
T 3gx8_A 17 PVVLFMKGTPEFPKCGFSRATIGLLGN-------QGVDPAKFAAYNVLEDPELREG 65 (121)
T ss_dssp SEEEEESBCSSSBCTTHHHHHHHHHHH-------HTBCGGGEEEEECTTCHHHHHH
T ss_pred CEEEEEeccCCCCCCccHHHHHHHHHH-------cCCCcceEEEEEecCCHHHHHH
Confidence 35667776 499999987766654 4555 444544433344433
No 286
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=80.11 E-value=0.5 Score=41.93 Aligned_cols=38 Identities=13% Similarity=0.283 Sum_probs=25.8
Q ss_pred eEeCCCccCCCeEEEEEEcCCCChhhHHHHHHHHhcHHHH
Q 025756 87 AIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVM 126 (248)
Q Consensus 87 ~v~l~~l~~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l 126 (248)
.+.+.+.+++.. ++.|...|||+|++..+.+.+..+++
T Consensus 189 ~~~la~~l~~~~--vV~F~A~WC~~Ck~l~p~le~lA~~l 226 (291)
T 3kp9_A 189 AVGLAAHLRQIG--GTMYGAYWCPHCQDQKELFGAAFDQV 226 (291)
T ss_dssp HHHHHHHHHHTT--CEEEECTTCHHHHHHHHHHGGGGGGS
T ss_pred HHHHHHHhCCCC--EEEEECCCCHHHHHHHHHHHHHHHHc
Confidence 444544443322 46677999999999998888765444
No 287
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=79.98 E-value=2.6 Score=29.85 Aligned_cols=35 Identities=6% Similarity=-0.021 Sum_probs=21.6
Q ss_pred EEEEcCCCChhhH-----HHHHHHHhcHHHHHHCCCEEEEEeCCCH
Q 025756 101 VAFARHFGCVLCR-----KRADYLAAKKDVMDASGVALVLIGPGSV 141 (248)
Q Consensus 101 lvF~R~~~Cp~C~-----~~l~~L~~~~~~l~~~Gv~vV~Is~~~~ 141 (248)
|+.|-..+||+|. ..+.+ .|++.|+....|..+..
T Consensus 4 v~ly~~~~C~~c~~~~~~~~ak~------~L~~~~i~~~~~di~~~ 43 (93)
T 1t1v_A 4 LRVYSTSVTGSREIKSQQSEVTR------ILDGKRIQYQLVDISQD 43 (93)
T ss_dssp EEEEECSSCSCHHHHHHHHHHHH------HHHHTTCCCEEEETTSC
T ss_pred EEEEEcCCCCCchhhHHHHHHHH------HHHHCCCceEEEECCCC
Confidence 3445678999994 33333 35567777666666543
No 288
>2wem_A Glutaredoxin-related protein 5; chromosome 14 open reading frame 87, Fe/S cluster, oxidoreductase, thioredoxin family, GLRX5, FLB4739, C14ORF87; HET: GTT; 2.40A {Homo sapiens} PDB: 2wul_A*
Probab=78.84 E-value=3.3 Score=31.30 Aligned_cols=46 Identities=24% Similarity=0.232 Sum_probs=26.3
Q ss_pred ccCCCeEEEEEEcC----CCChhhHHHHHHHHhcHHHHHHCCCE-EEEEeCCCHHHHHH
Q 025756 93 LWKDRKAVVAFARH----FGCVLCRKRADYLAAKKDVMDASGVA-LVLIGPGSVEQART 146 (248)
Q Consensus 93 l~~~~~vvlvF~R~----~~Cp~C~~~l~~L~~~~~~l~~~Gv~-vV~Is~~~~~~~~~ 146 (248)
+++..+ |++|-.. .|||+|++-..-|. +.|+. ...|..+....+++
T Consensus 16 ~i~~~~-Vvvfsk~t~~~p~Cp~C~~ak~lL~-------~~gv~~~~~vdV~~d~~~~~ 66 (118)
T 2wem_A 16 LVKKDK-VVVFLKGTPEQPQCGFSNAVVQILR-------LHGVRDYAAYNVLDDPELRQ 66 (118)
T ss_dssp HHHHSS-EEEEESBCSSSBSSHHHHHHHHHHH-------HTTCCCCEEEESSSCHHHHH
T ss_pred HhccCC-EEEEEecCCCCCccHHHHHHHHHHH-------HcCCCCCEEEEcCCCHHHHH
Confidence 333333 5667776 49999997766664 45553 44454443333433
No 289
>3bci_A Disulfide bond protein A; thiol-disulfide oxidoreductase, redox protein, protein folding, redox active centre; 1.81A {Staphylococcus aureus} PDB: 3bd2_A 3bck_A
Probab=78.38 E-value=2.7 Score=33.35 Aligned_cols=42 Identities=12% Similarity=0.286 Sum_probs=29.9
Q ss_pred CCeEEEEEEcCCCChhhHHHHHHHH-hcHHHHHH-CCCEEEEEe
Q 025756 96 DRKAVVAFARHFGCVLCRKRADYLA-AKKDVMDA-SGVALVLIG 137 (248)
Q Consensus 96 ~~~vvlvF~R~~~Cp~C~~~l~~L~-~~~~~l~~-~Gv~vV~Is 137 (248)
+.++.|+.|--+.||+|......+. .+..++-+ -+++++...
T Consensus 10 ~a~~~i~~f~D~~Cp~C~~~~~~l~~~l~~~~~~~~~v~~~~~~ 53 (186)
T 3bci_A 10 NGKPLVVVYGDYKCPYCKELDEKVMPKLRKNYIDNHKVEYQFVN 53 (186)
T ss_dssp -CCCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTSSEEEEEE
T ss_pred CCCeEEEEEECCCChhHHHHHHHHHHHHHHHhccCCeEEEEEEe
Confidence 3577888999999999999988874 34445533 347777654
No 290
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=78.08 E-value=2.9 Score=30.80 Aligned_cols=39 Identities=21% Similarity=0.165 Sum_probs=24.3
Q ss_pred ccCCCeEEEEEEcC----CCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCC
Q 025756 93 LWKDRKAVVAFARH----FGCVLCRKRADYLAAKKDVMDASGVALVLIGPG 139 (248)
Q Consensus 93 l~~~~~vvlvF~R~----~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~ 139 (248)
+.+..+ |++|-.. .|||+|++-..-|.+ .|+....|..+
T Consensus 14 ~i~~~~-Vvvy~k~t~~~p~Cp~C~~ak~~L~~-------~gi~~~~~dI~ 56 (109)
T 3ipz_A 14 LVNSEK-VVLFMKGTRDFPMCGFSNTVVQILKN-------LNVPFEDVNIL 56 (109)
T ss_dssp HHTSSS-EEEEESBCSSSBSSHHHHHHHHHHHH-------TTCCCEEEEGG
T ss_pred HHccCC-EEEEEecCCCCCCChhHHHHHHHHHH-------cCCCcEEEECC
Confidence 344444 5567776 499999987666654 45555555443
No 291
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=77.86 E-value=2.5 Score=36.37 Aligned_cols=43 Identities=7% Similarity=-0.077 Sum_probs=28.8
Q ss_pred cCCCeEEEEEEc--CCCChhhHHHHHHHHhcHHHHHH--CCCEEEEEeCCC
Q 025756 94 WKDRKAVVAFAR--HFGCVLCRKRADYLAAKKDVMDA--SGVALVLIGPGS 140 (248)
Q Consensus 94 ~~~~~vvlvF~R--~~~Cp~C~~~l~~L~~~~~~l~~--~Gv~vV~Is~~~ 140 (248)
....+.+|+.|. ..||+ ..+.+.+...++.. ..+.++-|.++.
T Consensus 30 i~~~~~vlV~Fy~~ApWCg----l~P~~e~lA~~~~~~~~~v~~akVD~d~ 76 (248)
T 2c0g_A 30 VERFPYSVVKFDIASPYGE----KHEAFTAFSKSAHKATKDLLIATVGVKD 76 (248)
T ss_dssp HTTSSEEEEEEEESSCCSH----HHHHHHHHHHHHHHHCSSEEEEEEEECS
T ss_pred HhcCCCEEEEEECCCCCCc----cHHHHHHHHHHHhccCCCeEEEEEECCc
Confidence 333445555556 89998 56666666666654 468888888776
No 292
>2ct6_A SH3 domain-binding glutamic acid-rich-like protein 2; SH3BGRL2,FASH3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=77.49 E-value=4.3 Score=30.00 Aligned_cols=49 Identities=6% Similarity=-0.002 Sum_probs=27.7
Q ss_pred EEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCCHHHHH-HHHhh
Q 025756 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQAR-TFSEQ 150 (248)
Q Consensus 101 lvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~~~~~~-~f~~~ 150 (248)
|++|-..+||+|... .+-++....|++.|+....|-.+.....+ ++.+.
T Consensus 10 V~vy~~~~C~~C~~~-~~~~~ak~~L~~~gi~y~~vdI~~~~~~~~~l~~~ 59 (111)
T 2ct6_A 10 IRVFIASSSGFVAIK-KKQQDVVRFLEANKIEFEEVDITMSEEQRQWMYKN 59 (111)
T ss_dssp EEEEECSSCSCHHHH-HHHHHHHHHHHHTTCCEEEEETTTCHHHHHHHHHS
T ss_pred EEEEEcCCCCCcccc-hhHHHHHHHHHHcCCCEEEEECCCCHHHHHHHHHH
Confidence 445567899999930 01112233456778888777776543333 34443
No 293
>3c7m_A Thiol:disulfide interchange protein DSBA-like; redox protein, periplasm, redox-active center, oxidoreductase; HET: PGE; 1.55A {Escherichia coli} PDB: 3l9u_A
Probab=77.34 E-value=3.3 Score=32.72 Aligned_cols=39 Identities=15% Similarity=0.302 Sum_probs=26.4
Q ss_pred eEEEEEEcCCCChhhHHHHHHH-HhcHHHHHHCCCEEEEEeC
Q 025756 98 KAVVAFARHFGCVLCRKRADYL-AAKKDVMDASGVALVLIGP 138 (248)
Q Consensus 98 ~vvlvF~R~~~Cp~C~~~l~~L-~~~~~~l~~~Gv~vV~Is~ 138 (248)
+++|.|| .+.||+|......| .+...++. ..++++.+..
T Consensus 19 ~~~ief~-d~~CP~C~~~~~~l~~~l~~~~~-~~v~~~~~~l 58 (195)
T 3c7m_A 19 KTLIKVF-SYACPFCYKYDKAVTGPVSEKVK-DIVAFTPFHL 58 (195)
T ss_dssp TEEEEEE-CTTCHHHHHHHHHTHHHHHHHTT-TTCEEEEEEC
T ss_pred cEEEEEE-eCcCcchhhCcHHHHHHHHHhCC-CceEEEEEec
Confidence 4566655 59999999988888 66555443 2467666653
No 294
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=76.95 E-value=3.5 Score=34.66 Aligned_cols=45 Identities=13% Similarity=0.119 Sum_probs=27.1
Q ss_pred CeEEEEEEcCCC-ChhhHHHHHHHHhcHHHHHH-CC---CEEEEEeCCCH
Q 025756 97 RKAVVAFARHFG-CVLCRKRADYLAAKKDVMDA-SG---VALVLIGPGSV 141 (248)
Q Consensus 97 ~~vvlvF~R~~~-Cp~C~~~l~~L~~~~~~l~~-~G---v~vV~Is~~~~ 141 (248)
+|++|.||-.+| |+.|++...-|.+....... .| +.++.|..+..
T Consensus 26 ~pv~v~~~~~~~~c~~c~~~~~~l~ela~~~~~~~~~~~v~~~~vd~d~~ 75 (243)
T 2hls_A 26 NPVEVHVFLSKSGCETCEDTLRLMKLFEEESPTRNGGKLLKLNVYYRESD 75 (243)
T ss_dssp SCEEEEEEECSSSCTTHHHHHHHHHHHHHHSCEETTEESEEEEEEETTTT
T ss_pred CCEEEEEEeCCCCCCchHHHHHHHHHHHHhccCCCCCceeEEEEecCCcC
Confidence 688877774432 99999877666665544211 11 55666655443
No 295
>3l9s_A Thiol:disulfide interchange protein; thioredoxin-fold, DSBA, thiol-disulfide oxidoreductase, DISU bond, redox-active center; 1.58A {Salmonella enterica subsp} SCOP: c.47.1.13 PDB: 1a23_A 1a24_A 1a2j_A 1a2l_A 1a2m_A 1dsb_A 1fvk_A 3dks_A 1bq7_A 1fvj_A 1acv_A 1u3a_A* 1ti1_A* 2hi7_A* 2leg_A* 2zup_A* 3e9j_B* 1ac1_A 2b6m_A 2b3s_A
Probab=75.52 E-value=1.7 Score=35.41 Aligned_cols=39 Identities=18% Similarity=0.203 Sum_probs=26.2
Q ss_pred eEEEEEEcCCCChhhHHHHHHH---HhcHHHHHHCCCEEEEEe
Q 025756 98 KAVVAFARHFGCVLCRKRADYL---AAKKDVMDASGVALVLIG 137 (248)
Q Consensus 98 ~vvlvF~R~~~Cp~C~~~l~~L---~~~~~~l~~~Gv~vV~Is 137 (248)
++.|+-|-.++||+|......| .+...++.+ +++++-+.
T Consensus 22 ~~~vvef~d~~Cp~C~~~~~~l~~~~~l~~~~~~-~v~~~~~~ 63 (191)
T 3l9s_A 22 EPQVLEFFSFYCPHCYQFEEVLHVSDNVKKKLPE-GTKMTKYH 63 (191)
T ss_dssp SSCEEEEECTTCHHHHHHHHTSCHHHHHHHHSCT-TCCEEEEE
T ss_pred CCeEEEEECCCChhHHHhChhccchHHHHHhCCC-CcEEEEEe
Confidence 3456677789999999988776 344444432 57776655
No 296
>3tdg_A DSBG, putative uncharacterized protein; thioredoxin fold, reductase, oxidoreductase; HET: P6G; 2.10A {Helicobacter pylori}
Probab=73.04 E-value=3 Score=36.58 Aligned_cols=39 Identities=18% Similarity=0.326 Sum_probs=28.9
Q ss_pred CeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeC
Q 025756 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGP 138 (248)
Q Consensus 97 ~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~ 138 (248)
++.+|+.|--.-||+|++...+|.+... +-.+.++.+..
T Consensus 147 gk~~I~vFtDp~CPYCkkl~~~l~~~l~---~~~Vr~i~~Pi 185 (273)
T 3tdg_A 147 KDKILYIVSDPMCPHCQKELTKLRDHLK---ENTVRMVVVGW 185 (273)
T ss_dssp TTCEEEEEECTTCHHHHHHHHTHHHHHH---HCEEEEEECCC
T ss_pred CCeEEEEEECcCChhHHHHHHHHHHHhh---CCcEEEEEeec
Confidence 4567777789999999999999986543 35566666554
No 297
>3zyw_A Glutaredoxin-3; metal binding protein; 1.84A {Homo sapiens}
Probab=72.01 E-value=3.9 Score=30.36 Aligned_cols=40 Identities=10% Similarity=0.142 Sum_probs=24.5
Q ss_pred CccCCCeEEEEEEcC----CCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCC
Q 025756 92 DLWKDRKAVVAFARH----FGCVLCRKRADYLAAKKDVMDASGVALVLIGPG 139 (248)
Q Consensus 92 ~l~~~~~vvlvF~R~----~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~ 139 (248)
++.+..++ ++|..+ .|||+|++-..-|. +.|+....|..+
T Consensus 11 ~~i~~~~V-vlf~kg~~~~~~Cp~C~~ak~~L~-------~~gi~y~~~di~ 54 (111)
T 3zyw_A 11 KLTHAAPC-MLFMKGTPQEPRCGFSKQMVEILH-------KHNIQFSSFDIF 54 (111)
T ss_dssp HHHTSSSE-EEEESBCSSSBSSHHHHHHHHHHH-------HTTCCCEEEEGG
T ss_pred HHHhcCCE-EEEEecCCCCCcchhHHHHHHHHH-------HcCCCeEEEECc
Confidence 34444444 455553 79999998776665 456655555443
No 298
>3gmf_A Protein-disulfide isomerase; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Novosphingobium aromaticivorans}
Probab=71.75 E-value=8 Score=31.83 Aligned_cols=49 Identities=10% Similarity=0.030 Sum_probs=33.9
Q ss_pred eEeCCCccCCCeEEEEEEcCCCChhhHHHHHHHHhcHH-HH-HHCCCEEEEEe
Q 025756 87 AIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKD-VM-DASGVALVLIG 137 (248)
Q Consensus 87 ~v~l~~l~~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~-~l-~~~Gv~vV~Is 137 (248)
...+++- +.|+.|+.|--+-||+|++....+..... ++ +.-.+++|...
T Consensus 7 ~~~~G~~--~a~vtivef~D~~Cp~C~~~~~~~~~~l~~~~i~~g~v~~v~r~ 57 (205)
T 3gmf_A 7 HHLLGNP--AAKLRLVEFVSYTCPHCSHFEIESEGQLKIGMVQPGKGAIEVRN 57 (205)
T ss_dssp EEEESCT--TCSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTSEEEEEEE
T ss_pred CceecCC--CCCeEEEEEECCCCHHHHHHHHHHHHHHHHHhccCCeEEEEEEe
Confidence 4455553 57899999999999999998877765433 44 33346666544
No 299
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=69.58 E-value=3.9 Score=34.83 Aligned_cols=43 Identities=9% Similarity=-0.018 Sum_probs=27.8
Q ss_pred cCCCeEEEEEEcC--CCChhhHHHHHHHHhcHHHHHH-CCCEEEEEeCCC
Q 025756 94 WKDRKAVVAFARH--FGCVLCRKRADYLAAKKDVMDA-SGVALVLIGPGS 140 (248)
Q Consensus 94 ~~~~~vvlvF~R~--~~Cp~C~~~l~~L~~~~~~l~~-~Gv~vV~Is~~~ 140 (248)
.+..+.+|+.|.. .||+ ..+.+.+...+++. .++.++-|..++
T Consensus 19 i~~~~~vlV~FyA~~pWCg----l~P~~e~lA~~~~~~~~v~~akVDvd~ 64 (240)
T 2qc7_A 19 IPKSKFVLVKFDTQYPYGE----KQDEFKRLAENSASSDDLLVAEVGISD 64 (240)
T ss_dssp GGGCSEEEEEECCSSCCSH----HHHHHHHHHHHHTTCTTEEEEEECCCC
T ss_pred HcCCCCEEEEEeCCCCCCc----chHHHHHHHHHhcCCCCeEEEEEeCCc
Confidence 3344566666677 9999 55566666666653 457888888553
No 300
>3gha_A Disulfide bond formation protein D; BDBD, DSBA-like, TRX-like, oxidoreductase, competence, redox-active center; 1.40A {Bacillus subtilis} PDB: 3eu4_A 3gh9_A 3eu3_A
Probab=69.03 E-value=5.9 Score=32.33 Aligned_cols=43 Identities=12% Similarity=0.172 Sum_probs=29.4
Q ss_pred CCeEEEEEEcCCCChhhHHHHHHHHh-cHHHHH-HCCCEEEEEeC
Q 025756 96 DRKAVVAFARHFGCVLCRKRADYLAA-KKDVMD-ASGVALVLIGP 138 (248)
Q Consensus 96 ~~~vvlvF~R~~~Cp~C~~~l~~L~~-~~~~l~-~~Gv~vV~Is~ 138 (248)
+.|+.|+.|-.+.||+|...-..+.. +..++- .-.++++.+-.
T Consensus 28 ~a~vtvvef~D~~CP~C~~~~~~~~~~l~~~~~~~g~v~~~~~~~ 72 (202)
T 3gha_A 28 DAPVTVVEFGDYKCPSCKVFNSDIFPKIQKDFIDKGDVKFSFVNV 72 (202)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHTHHHHHHHTTTTTSEEEEEEEC
T ss_pred CCCEEEEEEECCCChhHHHHHHHhhHHHHHHhccCCeEEEEEEec
Confidence 56888889999999999987776533 333442 23567666543
No 301
>3f4s_A Alpha-DSBA1, putative uncharacterized protein; thioredoxin-fold, oxidoreductase; HET: PGE; 1.55A {Wolbachia pipientis} PDB: 3f4r_A* 3f4t_A*
Probab=68.35 E-value=6.8 Score=32.77 Aligned_cols=48 Identities=8% Similarity=0.070 Sum_probs=32.2
Q ss_pred EeCCCccCCCeEEEEEEcCCCChhhHHHHHHH-HhcHHHHH-HCCCEEEEEe
Q 025756 88 IPISDLWKDRKAVVAFARHFGCVLCRKRADYL-AAKKDVMD-ASGVALVLIG 137 (248)
Q Consensus 88 v~l~~l~~~~~vvlvF~R~~~Cp~C~~~l~~L-~~~~~~l~-~~Gv~vV~Is 137 (248)
..+++- +.|+.|+.|--+.||+|+..-..+ .++..++- .-.++++..-
T Consensus 32 ~~~G~~--~A~vtIvef~Dy~CP~C~~~~~~~~~~l~~~~~~~g~V~~v~~~ 81 (226)
T 3f4s_A 32 KLLGDP--KAPILMIEYASLTCYHCSLFHRNVFPKIKEKYIDTGKMLYIFRH 81 (226)
T ss_dssp CEESCT--TCSEEEEEEECTTCHHHHHHHHHTHHHHHHHHTTTTSEEEEEEE
T ss_pred CccCCC--CCCEEEEEEECCCCHHHHHHHHHHHHHHHHHcccCCeEEEEEEe
Confidence 344442 568888889999999999987764 44555553 3346666554
No 302
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=64.91 E-value=5.7 Score=32.86 Aligned_cols=22 Identities=23% Similarity=0.511 Sum_probs=15.1
Q ss_pred EEEEEcCCCChhhHHHHHHHHh
Q 025756 100 VVAFARHFGCVLCRKRADYLAA 121 (248)
Q Consensus 100 vlvF~R~~~Cp~C~~~l~~L~~ 121 (248)
.+.+|-..|||+|++-...|.+
T Consensus 171 ~i~ly~~~~Cp~C~~a~~~L~~ 192 (241)
T 1nm3_A 171 SISIFTKPGCPFCAKAKQLLHD 192 (241)
T ss_dssp CEEEEECSSCHHHHHHHHHHHH
T ss_pred eEEEEECCCChHHHHHHHHHHH
Confidence 3555667899999976555543
No 303
>3l4n_A Monothiol glutaredoxin-6; C-terminal domain of GRX6, oxidoreductase; HET: GSH; 1.50A {Saccharomyces cerevisiae}
Probab=62.67 E-value=5.7 Score=30.43 Aligned_cols=54 Identities=6% Similarity=0.129 Sum_probs=28.2
Q ss_pred CccCCCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCC-CHHHHHHHHh
Q 025756 92 DLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG-SVEQARTFSE 149 (248)
Q Consensus 92 ~l~~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~-~~~~~~~f~~ 149 (248)
++.+..+ |+ .|-..|||+|++-..-|.+.+. + .....+|=|..+ +.+.++++.+
T Consensus 9 ~ii~~~~-Vv-vysk~~Cp~C~~ak~lL~~~~~-~-~v~~~~idid~~~d~~~~~~~l~ 63 (127)
T 3l4n_A 9 LILDLSP-II-IFSKSTCSYSKGMKELLENEYQ-F-IPNYYIIELDKHGHGEELQEYIK 63 (127)
T ss_dssp HHHTSCS-EE-EEECTTCHHHHHHHHHHHHHEE-E-ESCCEEEEGGGSTTHHHHHHHHH
T ss_pred HHHccCC-EE-EEEcCCCccHHHHHHHHHHhcc-c-CCCcEEEEecCCCCHHHHHHHHH
Confidence 3444445 33 3445999999987777665210 0 112445555543 3345555553
No 304
>2wul_A Glutaredoxin related protein 5; chromosome 14 open reading frame 87, oxidoreductase, thiored family, GLRX5, FLB4739; HET: GSH; 2.40A {Homo sapiens}
Probab=61.74 E-value=13 Score=28.20 Aligned_cols=50 Identities=22% Similarity=0.184 Sum_probs=27.3
Q ss_pred CccCCCeEEEEEEcCC----CChhhHHHHHHHHhcHHHHHHCCCE-EEEEeCCCHHHHHHHHh
Q 025756 92 DLWKDRKAVVAFARHF----GCVLCRKRADYLAAKKDVMDASGVA-LVLIGPGSVEQARTFSE 149 (248)
Q Consensus 92 ~l~~~~~vvlvF~R~~----~Cp~C~~~l~~L~~~~~~l~~~Gv~-vV~Is~~~~~~~~~f~~ 149 (248)
++.++.+ ||+|..++ .||+|.+-..-|. ..|+. ...|-..+...++++..
T Consensus 15 ~~i~~~~-VvvF~Kgt~~~P~C~fc~~ak~lL~-------~~gv~~~~~~~v~~~~~~r~~l~ 69 (118)
T 2wul_A 15 ALVKKDK-VVVFLKGTPEQPQCGFSNAVVQILR-------LHGVRDYAAYNVLDDPELRQGIK 69 (118)
T ss_dssp HHHHHSS-EEEEESBCSSSBSSHHHHHHHHHHH-------HTTCCSCEEEETTSCHHHHHHHH
T ss_pred HHHhcCC-EEEEEcCCCCCCCCHHHHHHHHHHH-------HhCCcCeEeecccCCHHHHHHHH
Confidence 3444444 56677663 8999997766653 45552 33444333334444443
No 305
>4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii}
Probab=53.40 E-value=11 Score=34.27 Aligned_cols=45 Identities=11% Similarity=0.225 Sum_probs=36.6
Q ss_pred HHHHhcHHHHHHCCCEEEEEeCCCHHHHHHHHhhcCCCC--CCChHH
Q 025756 117 DYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKG--DPNHSS 161 (248)
Q Consensus 117 ~~L~~~~~~l~~~Gv~vV~Is~~~~~~~~~f~~~~~fp~--Dp~~~~ 161 (248)
+...++...+++.|+.|+.||.+..+.++.++++.+|.+ ++++-+
T Consensus 224 p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~lg~~y~ip~~~Vi 270 (385)
T 4gxt_A 224 DEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDTNNNYKMKEEKVL 270 (385)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHCTTSSCCCCGGGEE
T ss_pred HHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCcccCCCcceEE
Confidence 456667888899999999999999999999999988765 444433
No 306
>4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A*
Probab=51.25 E-value=10 Score=33.80 Aligned_cols=45 Identities=11% Similarity=0.235 Sum_probs=34.8
Q ss_pred HHHHhcHHHHHHCCCEEEEEeCCCHHHHHHHHhhcC--CCCCCChHH
Q 025756 117 DYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTK--FKGDPNHSS 161 (248)
Q Consensus 117 ~~L~~~~~~l~~~Gv~vV~Is~~~~~~~~~f~~~~~--fp~Dp~~~~ 161 (248)
.+..++...+++.|++|++||.+..+.++.|++..+ |-++|++-+
T Consensus 146 ~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~~~~~ygIp~e~Vi 192 (327)
T 4as2_A 146 SGQRELYNKLMENGIEVYVISAAHEELVRMVAADPRYGYNAKPENVI 192 (327)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTCGGGSCCCCGGGEE
T ss_pred HHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhhcccccCCCHHHeE
Confidence 345667788899999999999999999999998754 333555533
No 307
>2ec4_A FAS-associated factor 1; UAS domain, protein FAF1, HFAF1, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=48.40 E-value=73 Score=25.51 Aligned_cols=48 Identities=13% Similarity=0.015 Sum_probs=35.0
Q ss_pred CCCeEEEEEEcCCCChhhHHHHHHHHhc--HHHHHHCCCEEEEEeCCCHH
Q 025756 95 KDRKAVVAFARHFGCVLCRKRADYLAAK--KDVMDASGVALVLIGPGSVE 142 (248)
Q Consensus 95 ~~~~vvlvF~R~~~Cp~C~~~l~~L~~~--~~~l~~~Gv~vV~Is~~~~~ 142 (248)
++++.|++++-+.+|+.|.....++=.. .-++=..+.-+.+....+.+
T Consensus 53 ~e~K~LlVyLhs~~~~~~~~f~~~~L~~~~V~~~l~~nfV~w~~dv~~~e 102 (178)
T 2ec4_A 53 RDRKLLAIYLHHDESVLTNVFCSQMLCAESIVSYLSQNFITWAWDLTKDS 102 (178)
T ss_dssp TTCCEEEEEEECSSCSHHHHHHHHTTTCHHHHHHHHHTEEEEEEECCSHH
T ss_pred hhCcEEEEEEeCCCCccHHHHHHHhcCCHHHHHHHHcCEEEEEEeCCCch
Confidence 3578999999999999999988766332 22333347777787777776
No 308
>2in3_A Hypothetical protein; DSBA family, FRNE-like subfamily, disulfide isomerase, struc genomics, PSI-2, protein structure initiative; 1.85A {Nitrosomonas europaea}
Probab=47.94 E-value=32 Score=27.38 Aligned_cols=39 Identities=13% Similarity=0.175 Sum_probs=25.8
Q ss_pred eEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEe
Q 025756 98 KAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIG 137 (248)
Q Consensus 98 ~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is 137 (248)
++.|.+|-.+.||+|......+.++.. +...+++|+.+.
T Consensus 7 ~~~I~~f~D~~CP~C~~~~~~~~~l~~-~~~~~v~v~~~~ 45 (216)
T 2in3_A 7 KPVLWYIADPMCSWCWGFAPVIENIRQ-EYSAFLTVKIMP 45 (216)
T ss_dssp CCEEEEEECTTCHHHHHHHHHHHHHHH-HHTTTCEEEEEE
T ss_pred ceeEEEEECCCCchhhcchHHHHHHHh-cCCCCeEEEEee
Confidence 456778889999999955555544433 434467777654
No 309
>2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus}
Probab=47.36 E-value=51 Score=24.67 Aligned_cols=35 Identities=11% Similarity=0.130 Sum_probs=28.6
Q ss_pred HhcHHHHHHCCCEEEEEeCCCHHHHHHHHhhcCCC
Q 025756 120 AAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFK 154 (248)
Q Consensus 120 ~~~~~~l~~~Gv~vV~Is~~~~~~~~~f~~~~~fp 154 (248)
.+...++++.|+.++.++..+...++.+.+.+++.
T Consensus 42 ~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~ 76 (162)
T 2p9j_A 42 GIGIKLLQKMGITLAVISGRDSAPLITRLKELGVE 76 (162)
T ss_dssp HHHHHHHHTTTCEEEEEESCCCHHHHHHHHHTTCC
T ss_pred HHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCH
Confidence 34566677899999999999888899998887754
No 310
>1u6t_A SH3 domain-binding glutamic acid-rich-like protein; SH3-binding, glutaredoxin, thioredoxin fold, crystallography, protein binding; HET: CIT; 1.90A {Homo sapiens} PDB: 1wry_A
Probab=47.07 E-value=31 Score=26.29 Aligned_cols=46 Identities=9% Similarity=-0.017 Sum_probs=30.1
Q ss_pred EEEEEcCCCChhhH-----HHHHHHHhcHHHHHHCCCEEEEEeCC-CHHHHHHHHhhc
Q 025756 100 VVAFARHFGCVLCR-----KRADYLAAKKDVMDASGVALVLIGPG-SVEQARTFSEQT 151 (248)
Q Consensus 100 vlvF~R~~~Cp~C~-----~~l~~L~~~~~~l~~~Gv~vV~Is~~-~~~~~~~f~~~~ 151 (248)
||..|-...||+|. ..+.. -|+..|+..--|..+ +.+.-+++.++.
T Consensus 1 ~V~vYtt~~c~~c~~kk~c~~aK~------lL~~kgV~feEidI~~d~~~r~eM~~~~ 52 (121)
T 1u6t_A 1 VIRVYIASSSGSTAIKKKQQDVLG------FLEANKIGFEEKDIAANEENRKWMRENV 52 (121)
T ss_dssp CEEEEECTTCSCHHHHHHHHHHHH------HHHHTTCCEEEEECTTCHHHHHHHHHHS
T ss_pred CEEEEecCCCCCccchHHHHHHHH------HHHHCCCceEEEECCCCHHHHHHHHHhc
Confidence 35667789999995 33333 377888887777776 444444555554
No 311
>3ghf_A Septum site-determining protein MINC; structural genomics, cell division, cell cycle, septation, PSI-2, protein structure initiative; HET: CIT; 2.20A {Salmonella typhimurium LT2}
Probab=44.55 E-value=20 Score=27.17 Aligned_cols=39 Identities=3% Similarity=0.032 Sum_probs=30.5
Q ss_pred HHHHhcHHHHHHCCCEEEEEeCCCHHHHHHHHhhcCCCC
Q 025756 117 DYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKG 155 (248)
Q Consensus 117 ~~L~~~~~~l~~~Gv~vV~Is~~~~~~~~~f~~~~~fp~ 155 (248)
.+|..+.+.+++.|+.+|+|..++.+..++.+...++|.
T Consensus 61 ~dl~~L~~~l~~~gl~~vGV~g~~~~~~~~~a~~~GLp~ 99 (120)
T 3ghf_A 61 VNWPELHKIVTSTGLRIIGVSGCKDASLKVEIDRMGLPL 99 (120)
T ss_dssp CCHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHHTCCE
T ss_pred HHHHHHHHHHHHcCCEEEEEeCCCcHHHHHHHHHCCCCc
Confidence 356777788889999999999887666777777777665
No 312
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=41.64 E-value=63 Score=26.17 Aligned_cols=43 Identities=5% Similarity=0.106 Sum_probs=33.8
Q ss_pred CeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCC
Q 025756 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS 140 (248)
Q Consensus 97 ~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~ 140 (248)
.|.++++|-..||.-|.+.+..+.+...+++.. +..+.|..+.
T Consensus 131 ~~~~~l~f~~~~~~~~~~~~~~~~~vAk~~k~~-i~F~~vd~~~ 173 (227)
T 4f9z_D 131 IQIHLLLIMNKASPEYEENMHRYQKAAKLFQGK-ILFILVDSGM 173 (227)
T ss_dssp CCEEEEEEECTTSTTHHHHHHHHHHHHHHTTTT-CEEEEEETTS
T ss_pred CceEEEEEEcCCcchHHHHHHHHHHHHHHhhCC-EEEEEeCCcc
Confidence 367777777789999999999999988888654 7777777764
No 313
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=41.20 E-value=1.6e+02 Score=27.20 Aligned_cols=32 Identities=13% Similarity=0.067 Sum_probs=25.5
Q ss_pred CccccCcCCCcEEecCCCCeEeCCCccCCCeEEEEE
Q 025756 68 SEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAF 103 (248)
Q Consensus 68 ~~~~g~~ap~f~L~d~~G~~v~l~~l~~~~~vvlvF 103 (248)
....|..+|++.|. +| .++-++++.+.+||.|
T Consensus 449 ~~~~G~r~p~~~l~--~g--~~l~d~~~~~~~ll~~ 480 (549)
T 2r0c_A 449 SARPGARAPHAWLT--PT--TSTLDLFGRGFVLLSF 480 (549)
T ss_dssp CCCTTSBCCCCBSS--SS--CBGGGGCSSSEEEEEE
T ss_pred CCCCCCcCCCcEeC--CC--cCHHHHcCCceEEEEc
Confidence 46789999999986 56 6788988877777766
No 314
>2axo_A Hypothetical protein ATU2684; alpha beta protein., structural genomics, PSI, protein struc initiative; 1.80A {Agrobacterium tumefaciens str} SCOP: c.47.1.19
Probab=40.96 E-value=70 Score=27.72 Aligned_cols=37 Identities=22% Similarity=0.261 Sum_probs=26.9
Q ss_pred eEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEe
Q 025756 98 KAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIG 137 (248)
Q Consensus 98 ~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is 137 (248)
++.|..|-..+||+|...-.-|.+...+ .|+..+.+-
T Consensus 43 ~~~VelyTs~gCp~C~~Ak~lL~~~~~~---~~vi~l~~~ 79 (270)
T 2axo_A 43 KGVVELFTSQGCASCPPADEALRKMIQK---GDVVGLSYH 79 (270)
T ss_dssp CCEEEEEECTTCTTCHHHHHHHHHHHHH---TSSEEEEEE
T ss_pred CcEEEEEeCCCCCChHHHHHHHHHhhcc---CCeeeEEEE
Confidence 3889999999999999887777766433 455444444
No 315
>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis}
Probab=35.45 E-value=63 Score=25.37 Aligned_cols=35 Identities=9% Similarity=-0.069 Sum_probs=28.6
Q ss_pred HhcHHHHHHCCCEEEEEeCCCHHHHHHHHhhcCCC
Q 025756 120 AAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFK 154 (248)
Q Consensus 120 ~~~~~~l~~~Gv~vV~Is~~~~~~~~~f~~~~~fp 154 (248)
.+....+++.|+.+++|+.+....++.+++.++++
T Consensus 98 ~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~~ 132 (232)
T 3fvv_A 98 VDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQ 132 (232)
T ss_dssp HHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 34455677899999999999988899999888765
No 316
>3oj6_A Blasticidin-S deaminase; ssgcid, seattle structural genomics for infectious disease, hydrolase; 1.70A {Coccidioides immitis}
Probab=31.77 E-value=15 Score=29.48 Aligned_cols=40 Identities=20% Similarity=0.248 Sum_probs=22.2
Q ss_pred CCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCCHHHHHHHHhhcCCCC
Q 025756 107 FGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKG 155 (248)
Q Consensus 107 ~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~~~~~~~f~~~~~fp~ 155 (248)
.=|..||+.+.+|. .++.|+....+. .......+-+++.|
T Consensus 110 ~PCG~CRQvL~Ef~--------~~~~vil~~~~g-~~~~~l~eLLP~~F 149 (158)
T 3oj6_A 110 SPCGRCRQVLADLH--------PGIKAIVIGKEG-PKMVAVEELLPSIY 149 (158)
T ss_dssp CCCHHHHHHHHHHS--------TTCEEEECCSSS-CEEEEGGGGSSSCC
T ss_pred CCCHHHHHHHHHhC--------CCCEEEEEcCCC-cEEEEHHHhCcCCC
Confidence 46888888888872 346666555443 12223334445544
No 317
>3kzq_A Putative uncharacterized protein VP2116; protein with unknown function, STRU genomics, PSI, MCSG, protein structure initiative; HET: PG6; 2.10A {Vibrio parahaemolyticus}
Probab=31.63 E-value=64 Score=25.69 Aligned_cols=38 Identities=8% Similarity=0.131 Sum_probs=29.2
Q ss_pred EEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEe
Q 025756 99 AVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIG 137 (248)
Q Consensus 99 vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is 137 (248)
.-|.||--+.||+|......|.+...++. .+++|.-+.
T Consensus 3 ~~I~~~~D~~CP~cy~~~~~l~~l~~~~~-~~v~v~~~p 40 (208)
T 3kzq_A 3 IKLYYVHDPMCSWCWGYKPTIEKLKQQLP-GVIQFEYVV 40 (208)
T ss_dssp EEEEEEECTTCHHHHHHHHHHHHHHHHSC-TTSEEEEEE
T ss_pred eEEEEEECCCCchhhhhhHHHHHHHHhCC-CCceEEEEe
Confidence 35778889999999988888888777663 467776655
No 318
>3hug_B Probable conserved membrane protein; ECF sigma factor, zinc binding anti-sigma factor, oxidative transcription regulation; 2.35A {Mycobacterium tuberculosis}
Probab=31.53 E-value=24 Score=26.59 Aligned_cols=23 Identities=22% Similarity=0.411 Sum_probs=19.7
Q ss_pred CCChhhHHHHHHHHhcHHHHHHC
Q 025756 107 FGCVLCRKRADYLAAKKDVMDAS 129 (248)
Q Consensus 107 ~~Cp~C~~~l~~L~~~~~~l~~~ 129 (248)
..|+-|+.++.+|++....+...
T Consensus 52 a~Cp~CR~ev~eL~~~~a~L~~l 74 (108)
T 3hug_B 52 AGCPECRGAVTELCGVPALLSQL 74 (108)
T ss_dssp HTCHHHHHHHHHHTTHHHHHTTS
T ss_pred HhCHHHHHHHHHHHHHHHHHhcC
Confidence 47999999999999988887654
No 319
>3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A*
Probab=28.80 E-value=1e+02 Score=24.19 Aligned_cols=59 Identities=7% Similarity=0.002 Sum_probs=36.7
Q ss_pred CCCc-EEecCCCCeEeCCCccC--CCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeC
Q 025756 75 LDTV-KVYDVNGNAIPISDLWK--DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGP 138 (248)
Q Consensus 75 ap~f-~L~d~~G~~v~l~~l~~--~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~ 138 (248)
..++ .+.+.+|..+....+.. +.+.+|+|+.++++..- .+....+.|.+.|..|+++..
T Consensus 16 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~~vv~~hG~~~~~~-----~~~~~~~~l~~~g~~v~~~d~ 77 (303)
T 3pe6_A 16 YQDLPHLVNADGQYLFCRYWAPTGTPKALIFVSHGAGEHSG-----RYEELARMLMGLDLLVFAHDH 77 (303)
T ss_dssp GGGSCEEECTTSCEEEEEEECCSSCCSEEEEEECCTTCCGG-----GGHHHHHHHHHTTEEEEEECC
T ss_pred cCCCCeEecCCCeEEEEEEeccCCCCCeEEEEECCCCchhh-----HHHHHHHHHHhCCCcEEEeCC
Confidence 3344 67778888776654322 23467778888765322 223345666777999999974
No 320
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=27.48 E-value=28 Score=26.67 Aligned_cols=32 Identities=16% Similarity=-0.002 Sum_probs=21.9
Q ss_pred eeceEEEEeCCCCeEEEEEeCCCCCCCCCHHHHHHHh
Q 025756 210 QQGGIIVAGPGKSNISYIHRDKEAGDDPDIQDILKAC 246 (248)
Q Consensus 210 qlgG~fVvd~gg~~I~~~h~~~~~~Dh~~i~eIL~al 246 (248)
.+|..+++|++| ++++.+.+ ...+.+++++.+
T Consensus 130 ~~Pt~~lid~~G-~~~~~~~G----~~~~~~~l~~~l 161 (172)
T 3f9u_A 130 AQPFYVLIDNEG-NPLNKSYA----YDEDISKYINFL 161 (172)
T ss_dssp CSSEEEEECTTS-CBSSCCBC----SCCCHHHHHHHH
T ss_pred CcceEEEECCCC-CEEeeccC----CCCCHHHHHHHH
Confidence 478899999998 88877663 333366665544
No 321
>2imf_A HCCA isomerase, 2-hydroxychromene-2-carboxylate isomerase; glutathione, KGST, kappa GST, transferase; HET: GSH TOM CXS; 1.30A {Pseudomonas putida} PDB: 2ime_A* 2imd_A*
Probab=26.72 E-value=79 Score=25.01 Aligned_cols=34 Identities=15% Similarity=0.099 Sum_probs=26.9
Q ss_pred EEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEe
Q 025756 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIG 137 (248)
Q Consensus 101 lvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is 137 (248)
|.+|--+-||+|..-...|.+...++ +++|+.-.
T Consensus 3 I~~~~D~~CP~cy~~~~~l~~~~~~~---~~~v~~~p 36 (203)
T 2imf_A 3 VDFYFDFLSPFSYLANQRLSKLAQDY---GLTIRYNA 36 (203)
T ss_dssp EEEEECTTCHHHHHHHHHHHHHHHHH---CCEEEEEE
T ss_pred EEEEEeCCCHHHHHHHHHHHHHHHHc---CCeEEEEe
Confidence 67788999999999999998877665 47765544
No 322
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=25.51 E-value=2e+02 Score=25.17 Aligned_cols=70 Identities=13% Similarity=0.097 Sum_probs=46.7
Q ss_pred EEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEe-CCCHHHHHHHHhhcCCCC-----------CCChHHHHHcCC
Q 025756 100 VVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIG-PGSVEQARTFSEQTKFKG-----------DPNHSSYEALSF 167 (248)
Q Consensus 100 vlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is-~~~~~~~~~f~~~~~fp~-----------Dp~~~~y~alGl 167 (248)
+++.-|-.-- -..-+.+--++...+.++|+.+|.|- ..+.+.+++|.+..+.|+ ..+.+-.+++|+
T Consensus 156 ~~I~ARTDa~--~~~gldeai~Ra~ay~~AGAD~if~~~~~~~ee~~~~~~~~~~Pl~~n~~~~g~tp~~~~~eL~~lGv 233 (298)
T 3eoo_A 156 FVIMARTDAA--AAEGIDAAIERAIAYVEAGADMIFPEAMKTLDDYRRFKEAVKVPILANLTEFGSTPLFTLDELKGANV 233 (298)
T ss_dssp SEEEEEECTH--HHHHHHHHHHHHHHHHHTTCSEEEECCCCSHHHHHHHHHHHCSCBEEECCTTSSSCCCCHHHHHHTTC
T ss_pred eEEEEeehhh--hhcCHHHHHHHHHhhHhcCCCEEEeCCCCCHHHHHHHHHHcCCCeEEEeccCCCCCCCCHHHHHHcCC
Confidence 4555565432 12223444445666788999988885 446889999999876554 245678889999
Q ss_pred cccc
Q 025756 168 VSGV 171 (248)
Q Consensus 168 ~~~~ 171 (248)
..-.
T Consensus 234 ~~v~ 237 (298)
T 3eoo_A 234 DIAL 237 (298)
T ss_dssp CEEE
T ss_pred eEEE
Confidence 8754
No 323
>2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A*
Probab=25.45 E-value=80 Score=24.59 Aligned_cols=33 Identities=6% Similarity=-0.011 Sum_probs=27.4
Q ss_pred cHHHHHHCCCEEEEEeCCCHHHHHHHHhhcCCC
Q 025756 122 KKDVMDASGVALVLIGPGSVEQARTFSEQTKFK 154 (248)
Q Consensus 122 ~~~~l~~~Gv~vV~Is~~~~~~~~~f~~~~~fp 154 (248)
...++++.|+.++.|+..+...++.+.+.++++
T Consensus 61 ~l~~L~~~g~~v~ivT~~~~~~~~~~l~~lgl~ 93 (188)
T 2r8e_A 61 GIRCALTSDIEVAIITGRKAKLVEDRCATLGIT 93 (188)
T ss_dssp HHHHHHTTTCEEEEECSSCCHHHHHHHHHHTCC
T ss_pred HHHHHHHCCCeEEEEeCCChHHHHHHHHHcCCc
Confidence 456677899999999999888888888877754
No 324
>4ev1_A Anabena TIC22; TIC22 fold, chaperon, protein transport, TIC22-like family, thylakoids, chaperone; HET: NHE; 1.95A {Anabaena SP}
Probab=25.45 E-value=90 Score=26.83 Aligned_cols=67 Identities=13% Similarity=0.114 Sum_probs=43.2
Q ss_pred cccCcCCCcEEecCCCCeEeCCCccC------CCeEEEEEEcCCCChhhHHHHHH----HHh---cHH---HHHHCCCEE
Q 025756 70 DTKNLLDTVKVYDVNGNAIPISDLWK------DRKAVVAFARHFGCVLCRKRADY----LAA---KKD---VMDASGVAL 133 (248)
Q Consensus 70 ~~g~~ap~f~L~d~~G~~v~l~~l~~------~~~vvlvF~R~~~Cp~C~~~l~~----L~~---~~~---~l~~~Gv~v 133 (248)
+-.+..|-|.|.|..|+++-+..--. +..+.++|+ +++.+.+ |+. ..+ ++ ..+++|
T Consensus 9 ekL~~VPVF~Itn~~G~Pll~~~~~~~~~~~~~~~V~~~F~-------s~~dA~~~L~~lk~~~~~np~~~~~-~~~~kV 80 (252)
T 4ev1_A 9 EKLDSVPIYLVTNEKGLPLSRPLPNAPNGQKAGGSITGAYM-------SRQEAQAFINELRNAKNKDPKMQEI-VKSLQV 80 (252)
T ss_dssp HHHTTSEEEEEECTTCCBCEEECCCCTTSCCSCSEEEEEES-------CHHHHHHHHHHHHHCSSCCHHHHHH-HTTCEE
T ss_pred HHhcCCcEEEEECCCCCeEEEecCCccccccCCCeEEEEEe-------cHHHHHHHHHHHHhccccCchhhhh-ccCceE
Confidence 44667899999999999877664321 245666665 4554444 444 323 22 457999
Q ss_pred EEEeCCCHHHH
Q 025756 134 VLIGPGSVEQA 144 (248)
Q Consensus 134 V~Is~~~~~~~ 144 (248)
+.|+.+....+
T Consensus 81 ~~vsL~~vyql 91 (252)
T 4ev1_A 81 TAVPLGVIYQQ 91 (252)
T ss_dssp EEEEHHHHHHH
T ss_pred EEeeHHHHHHH
Confidence 99998876443
No 325
>3hju_A Monoglyceride lipase; alpha/beta hydrolase, hydrolase, serine esterase; 2.20A {Homo sapiens}
Probab=23.31 E-value=1.7e+02 Score=23.88 Aligned_cols=61 Identities=7% Similarity=-0.028 Sum_probs=37.8
Q ss_pred CcCCCc-EEecCCCCeEeCCCcc--CCCeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeC
Q 025756 73 NLLDTV-KVYDVNGNAIPISDLW--KDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGP 138 (248)
Q Consensus 73 ~~ap~f-~L~d~~G~~v~l~~l~--~~~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~ 138 (248)
-...++ .+.+.+|..+....+. ++.+.+|+|+-++++..- .+....+.|.+.|..||++..
T Consensus 32 ~~~~~~~~~~~~dg~~l~~~~~~p~~~~~p~vv~~HG~~~~~~-----~~~~~~~~l~~~g~~vi~~D~ 95 (342)
T 3hju_A 32 IPYQDLPHLVNADGQYLFCRYWKPTGTPKALIFVSHGAGEHSG-----RYEELARMLMGLDLLVFAHDH 95 (342)
T ss_dssp CBTTSSCEEECTTSCEEEEEEECCSSCCSEEEEEECCTTCCGG-----GGHHHHHHHHTTTEEEEEECC
T ss_pred cccccCceEEccCCeEEEEEEeCCCCCCCcEEEEECCCCcccc-----hHHHHHHHHHhCCCeEEEEcC
Confidence 344556 6778888877654432 223456777777765332 233445667777999999963
No 326
>1m0f_B GPB, scaffolding protein B; bacteriophage, cryo electron microscopy, procapsid, morphogenesis, microviridae, assembly; 16.00A {Enterobacteria phage ALPHA3} SCOP: i.6.1.1
Probab=22.73 E-value=24 Score=24.05 Aligned_cols=28 Identities=18% Similarity=0.370 Sum_probs=19.3
Q ss_pred EEcCCCChhhHHHHHHHHhcHHHHHHCCCEE
Q 025756 103 FARHFGCVLCRKRADYLAAKKDVMDASGVAL 133 (248)
Q Consensus 103 F~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~v 133 (248)
|-|++||..|-+.-. ++|+.|++.+..|
T Consensus 22 ~~R~fG~A~~ddk~a---~~ya~FD~nd~rv 49 (68)
T 1m0f_B 22 CSRRFGGATCDDKSA---QIYARFDKNDWRI 49 (68)
T ss_pred HHHHcCCCCcchhhH---HHHhccCcCccee
Confidence 568999999986543 4577777665543
No 327
>4e6z_A Apicoplast TIC22, putative; TIC complex, import protein, transport protein; 2.15A {Plasmodium falciparum 3D7}
Probab=22.63 E-value=36 Score=29.73 Aligned_cols=66 Identities=9% Similarity=0.140 Sum_probs=44.6
Q ss_pred CCccccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEEcCCCChhhHHHHHHHH-hc----HHHHHHCCCEEEEEeCCCH
Q 025756 67 VSEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLA-AK----KDVMDASGVALVLIGPGSV 141 (248)
Q Consensus 67 ~~~~~g~~ap~f~L~d~~G~~v~l~~l~~~~~vvlvF~R~~~Cp~C~~~l~~L~-~~----~~~l~~~Gv~vV~Is~~~~ 141 (248)
...+-.+..|-|.|.|.+|+++-..+ ++..+.++|+ +.+.+.++- +. .++. +.+++|+.|+-+..
T Consensus 69 ~I~EKL~~VPVF~Itn~~G~Pll~~~--~~~~V~~fF~-------s~~DA~a~L~el~k~~~~~~-~~~~kV~pvsL~kv 138 (279)
T 4e6z_A 69 PIEEKLEVIPVFLITNYNSSPYIFQE--NEKQVCYMFL-------CPYDAENMLNDMIKYNGMKY-NGNIKIHNITMKKA 138 (279)
T ss_dssp CHHHHSTTSEEEEEECTTCCBCCEEE--TTEEEEEEES-------SHHHHHHHHHHHHHHCHHHH-TTSCEEEEEEHHHH
T ss_pred hHHHHhcCCCEEEEEcCCCCEEEecC--CCCeEEEEEC-------CHHHHHHHHHHHHhccCccc-ccCceEEEecHHHH
Confidence 34577788999999999999876653 2344666664 556666543 22 2232 56899999998776
Q ss_pred H
Q 025756 142 E 142 (248)
Q Consensus 142 ~ 142 (248)
.
T Consensus 139 y 139 (279)
T 4e6z_A 139 Y 139 (279)
T ss_dssp H
T ss_pred H
Confidence 4
No 328
>3dex_A SAV_2001; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.70A {Streptomyces avermitilis} SCOP: c.47.1.0
Probab=22.36 E-value=33 Score=25.74 Aligned_cols=34 Identities=15% Similarity=0.281 Sum_probs=27.9
Q ss_pred eeceEEEEeCCCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025756 210 QQGGIIVAGPGKSNISYIHRDKEAGDDPDIQDILKACC 247 (248)
Q Consensus 210 qlgG~fVvd~gg~~I~~~h~~~~~~Dh~~i~eIL~al~ 247 (248)
..||.|-|.-+| +++|.-. -+..|+.++|.+.++
T Consensus 52 g~gG~FeV~vdg-~lVwsRk---~gGFPd~keLkq~VR 85 (107)
T 3dex_A 52 GTGGVFVVRVDD-EVVWDRR---EQGFPEPTAVKRLVR 85 (107)
T ss_dssp ESSSCEEEEETT-EEEEEHH---HHCSCCHHHHHHHHH
T ss_pred CCCceEEEEECC-EEEEEec---CCCCCCHHHHHHHHH
Confidence 368899887777 9999886 678999999988775
No 329
>3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis}
Probab=22.28 E-value=88 Score=24.13 Aligned_cols=66 Identities=12% Similarity=0.197 Sum_probs=42.9
Q ss_pred CcEEecCCCCeEeCCCcc-CC-CeEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEeCCCHHHHHHHHhhcCCC
Q 025756 77 TVKVYDVNGNAIPISDLW-KD-RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFK 154 (248)
Q Consensus 77 ~f~L~d~~G~~v~l~~l~-~~-~~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is~~~~~~~~~f~~~~~fp 154 (248)
..-++|.||-.+. ...+ .. +..+-.|... ..+ ...++++.|+.++.++.++...++.+++.++++
T Consensus 13 k~vifD~DGTL~d-~~~~~~~~~~~~~~~~~~-------~~~-----~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgi~ 79 (176)
T 3mmz_A 13 DAVVLDFDGTQTD-DRVLIDSDGREFVSVHRG-------DGL-----GIAALRKSGLTMLILSTEQNPVVAARARKLKIP 79 (176)
T ss_dssp SEEEECCTTTTSC-SCCEECTTCCEEEEEEHH-------HHH-----HHHHHHHTTCEEEEEESSCCHHHHHHHHHHTCC
T ss_pred CEEEEeCCCCcCc-CCEeecCCccHhHhcccc-------cHH-----HHHHHHHCCCeEEEEECcChHHHHHHHHHcCCe
Confidence 4678999997766 3322 11 1222222111 000 467778999999999999888899999887754
Q ss_pred C
Q 025756 155 G 155 (248)
Q Consensus 155 ~ 155 (248)
+
T Consensus 80 ~ 80 (176)
T 3mmz_A 80 V 80 (176)
T ss_dssp E
T ss_pred e
Confidence 4
No 330
>2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A
Probab=21.69 E-value=1e+02 Score=23.70 Aligned_cols=36 Identities=17% Similarity=0.108 Sum_probs=27.4
Q ss_pred HHhcHHHHHHCCCEEEEEeCCC-HHHHHHHHhhcCCC
Q 025756 119 LAAKKDVMDASGVALVLIGPGS-VEQARTFSEQTKFK 154 (248)
Q Consensus 119 L~~~~~~l~~~Gv~vV~Is~~~-~~~~~~f~~~~~fp 154 (248)
..+...++++.|+.+++++..+ ...++.+.+..++.
T Consensus 73 ~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~gl~ 109 (187)
T 2wm8_A 73 VPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLF 109 (187)
T ss_dssp HHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHTTCT
T ss_pred HHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHcCcH
Confidence 3445566778899999999888 67888888877643
No 331
>1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A*
Probab=21.51 E-value=95 Score=23.88 Aligned_cols=34 Identities=6% Similarity=0.039 Sum_probs=28.1
Q ss_pred hcHHHHHHCCCEEEEEeCCCHHHHHHHHhhcCCC
Q 025756 121 AKKDVMDASGVALVLIGPGSVEQARTFSEQTKFK 154 (248)
Q Consensus 121 ~~~~~l~~~Gv~vV~Is~~~~~~~~~f~~~~~fp 154 (248)
+...++++.|+.++.++..+...++.+.+..++.
T Consensus 42 ~~l~~L~~~G~~~~i~Tg~~~~~~~~~~~~lgl~ 75 (180)
T 1k1e_A 42 LGIKMLMDADIQVAVLSGRDSPILRRRIADLGIK 75 (180)
T ss_dssp HHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCC
T ss_pred HHHHHHHHCCCeEEEEeCCCcHHHHHHHHHcCCc
Confidence 4566778899999999999888888888887754
No 332
>3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0
Probab=21.48 E-value=1.2e+02 Score=23.79 Aligned_cols=32 Identities=16% Similarity=0.185 Sum_probs=27.7
Q ss_pred HHHHHHCCCEEEEEeCCCHHHHHHHHhhcCCC
Q 025756 123 KDVMDASGVALVLIGPGSVEQARTFSEQTKFK 154 (248)
Q Consensus 123 ~~~l~~~Gv~vV~Is~~~~~~~~~f~~~~~fp 154 (248)
...+++.|+.+++|+.++...++..++.++++
T Consensus 55 l~~L~~~g~~~~ivTn~~~~~~~~~l~~lgl~ 86 (191)
T 3n1u_A 55 LKLLMAAGIQVAIITTAQNAVVDHRMEQLGIT 86 (191)
T ss_dssp HHHHHHTTCEEEEECSCCSHHHHHHHHHHTCC
T ss_pred HHHHHHCCCeEEEEeCcChHHHHHHHHHcCCc
Confidence 56778899999999999988899999888755
No 333
>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311}
Probab=21.48 E-value=1.4e+02 Score=22.35 Aligned_cols=35 Identities=9% Similarity=0.121 Sum_probs=27.6
Q ss_pred HHhcHHHHHHCCCEEEEEeCCCHHHHHHHHhhcCC
Q 025756 119 LAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKF 153 (248)
Q Consensus 119 L~~~~~~l~~~Gv~vV~Is~~~~~~~~~f~~~~~f 153 (248)
..+...++++.|+.+++++.++.+.++...+.+++
T Consensus 94 ~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l 128 (214)
T 3e58_A 94 VLKVLNEVKSQGLEIGLASSSVKADIFRALEENRL 128 (214)
T ss_dssp HHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCc
Confidence 33445677889999999999998888888877663
No 334
>2xry_A Deoxyribodipyrimidine photolyase; DNA damage, DNA repair; HET: FAD; 1.50A {Methanosarcina mazei} PDB: 2xrz_A*
Probab=21.21 E-value=1.9e+02 Score=26.61 Aligned_cols=56 Identities=9% Similarity=0.027 Sum_probs=41.3
Q ss_pred HHHHHHHhcHHHHHHCCCEEEEEeCCCHHHHHHHHhhcCCCC-----CCC-------hHHHHHcCCcc
Q 025756 114 KRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKG-----DPN-------HSSYEALSFVS 169 (248)
Q Consensus 114 ~~l~~L~~~~~~l~~~Gv~vV~Is~~~~~~~~~f~~~~~fp~-----Dp~-------~~~y~alGl~~ 169 (248)
-.+..|++...+|++.|..++.+..+..+.+.+++++++..- |++ .++.+++|+..
T Consensus 89 Fl~~sL~~L~~~L~~~G~~L~v~~g~~~~~l~~l~~~~~~~~V~~~~~~~~~~~~~~~~v~~~lgi~~ 156 (482)
T 2xry_A 89 FMLKGLQELEVSLSRKKIPSFFLRGDPGEKISRFVKDYNAGTLVTDFSPLRIKNQWIEKVISGISIPF 156 (482)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHHTTCSEEEEECCCSHHHHHHHHHHHHHCCSCE
T ss_pred HHHHHHHHHHHHHHHcCCcEEEEeCCHHHHHHHHHHHcCCCEEEEecccchhHHHHHHHHHHHcCCEE
Confidence 345678888999999999999988666678899998776332 333 45667778754
No 335
>2g84_A Cytidine and deoxycytidylate deaminase zinc-bindi; zinc-binding region, structural genomics, PSI, protein structure initiative; 1.40A {Nitrosomonas europaea} SCOP: c.97.1.2
Probab=20.99 E-value=92 Score=25.43 Aligned_cols=38 Identities=11% Similarity=-0.089 Sum_probs=25.6
Q ss_pred eeeceEEEEeCC-CCeEEEEEe----CCCCCCCCCHHHHHHHhh
Q 025756 209 WQQGGIIVAGPG-KSNISYIHR----DKEAGDDPDIQDILKACC 247 (248)
Q Consensus 209 ~qlgG~fVvd~g-g~~I~~~h~----~~~~~Dh~~i~eIL~al~ 247 (248)
.+. |..||+++ |..|.-.|- ..++..|+++..|.++.+
T Consensus 48 ~Pv-GAVIV~~~~g~Iia~G~N~~~~~~~~~~HAE~~Ai~~a~~ 90 (197)
T 2g84_A 48 GPF-AAAVFERDSGLLIAAGTNRVVPGRCSAAHAEILALSLAQA 90 (197)
T ss_dssp CSC-EEEEEETTTCBEEEEEECCTTTTTCTTCCHHHHHHHHHHH
T ss_pred CCE-EEEEEEcCCCEEEEEEECCCCccCCCccCHHHHHHHHHHH
Confidence 345 66677766 634445565 468899999999887653
No 336
>1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A
Probab=20.91 E-value=87 Score=24.43 Aligned_cols=33 Identities=12% Similarity=0.139 Sum_probs=26.5
Q ss_pred cHHHHHHCCCEEEEEeCCCHHHHHHHHhhcCCC
Q 025756 122 KKDVMDASGVALVLIGPGSVEQARTFSEQTKFK 154 (248)
Q Consensus 122 ~~~~l~~~Gv~vV~Is~~~~~~~~~f~~~~~fp 154 (248)
....+++.|+.+++|+.++...++...+.+++.
T Consensus 94 ~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~ 126 (225)
T 1nnl_A 94 LVSRLQERNVQVFLISGGFRSIVEHVASKLNIP 126 (225)
T ss_dssp HHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCC
T ss_pred HHHHHHHCCCcEEEEeCChHHHHHHHHHHcCCC
Confidence 455677889999999998888888888877654
No 337
>1r4w_A Glutathione S-transferase, mitochondrial; glutathione transferase, kappa GST, RGSTK1-1; HET: GSH; 2.50A {Rattus norvegicus} SCOP: c.47.1.13
Probab=20.84 E-value=71 Score=25.86 Aligned_cols=37 Identities=11% Similarity=-0.010 Sum_probs=27.1
Q ss_pred eEEEEEEcCCCChhhHHHHHHHHhcHHHHHHCCCEEEEEe
Q 025756 98 KAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIG 137 (248)
Q Consensus 98 ~vvlvF~R~~~Cp~C~~~l~~L~~~~~~l~~~Gv~vV~Is 137 (248)
++.|.+|--+-||+|..-...|.+...+ .+++|.-..
T Consensus 5 ~~~I~~~~D~~CP~Cy~~~~~l~~l~~~---~~~~v~~~p 41 (226)
T 1r4w_A 5 PRVLELFYDVLSPYSWLGFEVLCRYQHL---WNIKLKLRP 41 (226)
T ss_dssp CEEEEEEECTTCHHHHHHHHHHHHHTTT---SSEEEEEEE
T ss_pred CceEEEEEeCCChHHHHHHHHHHHHHHH---cCCeEEEEe
Confidence 3567888899999999988888775433 367766543
No 338
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=20.37 E-value=2.3e+02 Score=25.01 Aligned_cols=56 Identities=11% Similarity=0.151 Sum_probs=41.6
Q ss_pred HHHHHhcHHHHHHCCCEEEEEeC-CCHHHHHHHHhhcCCCC-----------CCChHHHHHcCCcccc
Q 025756 116 ADYLAAKKDVMDASGVALVLIGP-GSVEQARTFSEQTKFKG-----------DPNHSSYEALSFVSGV 171 (248)
Q Consensus 116 l~~L~~~~~~l~~~Gv~vV~Is~-~~~~~~~~f~~~~~fp~-----------Dp~~~~y~alGl~~~~ 171 (248)
+.+.-+....+.++|+..|.+-. -+.+.+++|.+....|. ..+.+-.+++|+..-.
T Consensus 188 l~~ai~Ra~Ay~eAGAd~i~~e~~~~~e~~~~i~~~l~~P~lan~~~~g~~~~~~~~eL~~lGv~~v~ 255 (318)
T 1zlp_A 188 LEEGIRRANLYKEAGADATFVEAPANVDELKEVSAKTKGLRIANMIEGGKTPLHTPEEFKEMGFHLIA 255 (318)
T ss_dssp HHHHHHHHHHHHHTTCSEEEECCCCSHHHHHHHHHHSCSEEEEEECTTSSSCCCCHHHHHHHTCCEEE
T ss_pred HHHHHHHHHHHHHcCCCEEEEcCCCCHHHHHHHHHhcCCCEEEEeccCCCCCCCCHHHHHHcCCeEEE
Confidence 45566667788899999888854 44588999999876553 4556788899988654
No 339
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=20.32 E-value=2.7e+02 Score=23.88 Aligned_cols=57 Identities=7% Similarity=0.072 Sum_probs=44.4
Q ss_pred HHHHHHhcHHHHHHCCCEEEEEeCC-CHHHHHHHHhhcCCCC-------CCChHHHHHcCCcccc
Q 025756 115 RADYLAAKKDVMDASGVALVLIGPG-SVEQARTFSEQTKFKG-------DPNHSSYEALSFVSGV 171 (248)
Q Consensus 115 ~l~~L~~~~~~l~~~Gv~vV~Is~~-~~~~~~~f~~~~~fp~-------Dp~~~~y~alGl~~~~ 171 (248)
.+.+.-+....+.++|+..|.+-.- +.+.+++|.+..+.|. .++.+-.+++|+..-.
T Consensus 166 ~~~~ai~Ra~ay~eAGAd~i~~e~~~~~~~~~~i~~~~~~P~n~~~~~~~~~~~eL~~lGv~~v~ 230 (275)
T 2ze3_A 166 RLAETVRRGQAYADAGADGIFVPLALQSQDIRALADALRVPLNVMAFPGSPVPRALLDAGAARVS 230 (275)
T ss_dssp HHHHHHHHHHHHHHTTCSEEECTTCCCHHHHHHHHHHCSSCEEEECCTTSCCHHHHHHTTCSEEE
T ss_pred hHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHhcCCCEEEecCCCCCCHHHHHHcCCcEEE
Confidence 4667777778888999998888654 4689999999888775 4567888889988643
No 340
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=20.09 E-value=2.5e+02 Score=24.52 Aligned_cols=56 Identities=13% Similarity=0.127 Sum_probs=41.7
Q ss_pred HHHHHhcHHHHHHCCCEEEEEe-CCCHHHHHHHHhhcCCCC-----------CCChHHHHHcCCcccc
Q 025756 116 ADYLAAKKDVMDASGVALVLIG-PGSVEQARTFSEQTKFKG-----------DPNHSSYEALSFVSGV 171 (248)
Q Consensus 116 l~~L~~~~~~l~~~Gv~vV~Is-~~~~~~~~~f~~~~~fp~-----------Dp~~~~y~alGl~~~~ 171 (248)
+.+.-+....+.++|+..|.+- ..+.+.+++|.+..+.|. ..+.+-.+++|+..-.
T Consensus 174 ~~~ai~Ra~ay~eAGAD~i~~e~~~~~~~~~~i~~~~~~P~~~n~~~~g~tp~~~~~eL~~lGv~~v~ 241 (305)
T 3ih1_A 174 LDEAIERANAYVKAGADAIFPEALQSEEEFRLFNSKVNAPLLANMTEFGKTPYYSAEEFANMGFQMVI 241 (305)
T ss_dssp HHHHHHHHHHHHHHTCSEEEETTCCSHHHHHHHHHHSCSCBEEECCTTSSSCCCCHHHHHHTTCSEEE
T ss_pred HHHHHHHHHHHHHcCCCEEEEcCCCCHHHHHHHHHHcCCCEEEeecCCCCCCCCCHHHHHHcCCCEEE
Confidence 5566666777889999988884 455689999999876554 2356778889988654
Done!