Query 025757
Match_columns 248
No_of_seqs 137 out of 1071
Neff 5.2
Searched_HMMs 46136
Date Fri Mar 29 09:12:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025757.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/025757hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PRK15087 hemolysin; Provisiona 100.0 4.7E-37 1E-41 271.4 17.0 161 75-242 9-207 (219)
2 COG1272 Predicted membrane pro 100.0 7.9E-37 1.7E-41 271.8 14.4 160 76-242 15-214 (226)
3 KOG4243 Macrophage maturation- 100.0 8.7E-33 1.9E-37 245.5 6.7 202 26-242 37-279 (298)
4 TIGR01065 hlyIII channel prote 100.0 5.4E-31 1.2E-35 229.9 16.1 155 81-242 1-195 (204)
5 PF03006 HlyIII: Haemolysin-II 99.9 9.9E-22 2.1E-26 169.6 14.0 158 78-242 2-220 (222)
6 KOG0748 Predicted membrane pro 98.6 6E-07 1.3E-11 83.0 12.4 164 77-244 45-263 (286)
7 PF05875 Ceramidase: Ceramidas 98.3 1E-05 2.3E-10 72.9 13.3 166 77-246 21-233 (262)
8 PF12036 DUF3522: Protein of u 94.4 0.22 4.8E-06 43.4 8.1 150 80-234 6-186 (186)
9 KOG2329 Alkaline ceramidase [L 92.9 0.12 2.6E-06 47.9 4.0 63 77-142 29-97 (276)
10 PF04080 Per1: Per1-like ; In 61.5 1.3E+02 0.0028 27.9 11.0 61 79-142 58-122 (267)
11 KOG2970 Predicted membrane pro 56.7 54 0.0012 31.3 7.7 61 79-142 108-174 (319)
12 COG5500 Predicted integral mem 45.4 33 0.00072 29.0 4.0 45 172-222 55-101 (159)
13 COG1117 PstB ABC-type phosphat 30.6 48 0.001 30.6 2.9 44 38-87 143-195 (253)
14 PF13965 SID-1_RNA_chan: dsRNA 20.8 65 0.0014 33.0 2.1 25 104-128 314-338 (570)
No 1
>PRK15087 hemolysin; Provisional
Probab=100.00 E-value=4.7e-37 Score=271.43 Aligned_cols=161 Identities=20% Similarity=0.278 Sum_probs=138.7
Q ss_pred CCCCHHHHHHHHHHHHHHHHHhc-------------c-cchhHHHHHHHHHHHHHHHHHHhhhccCc-hhHHHHHHHhhc
Q 025757 75 GDLHLLERVANVLTSLPFIALGL-------------Q-TPRKNLNMTLYANSLVGVGVTSSLYHSSR-GKLRKYLRWADY 139 (248)
Q Consensus 75 ~~~t~~EeiaN~iTH~~~i~~g~-------------~-~~~~~~s~~IYg~sli~lf~~STlYH~~~-~~~r~~lrrlDH 139 (248)
+.++..||.+|++||++++++++ . +..+.+++.+|+.|+++||++||+||..+ .+.|++|||+||
T Consensus 9 ~~~~~~eE~~N~~tH~ig~~~a~~~~~~l~~~~~~~~~~~~~~~~~~vy~~s~~~l~~~StlYH~~~~~~~~~~~~rlDh 88 (219)
T PRK15087 9 QGYSLAEEIANSISHGIGLVFGIVGLVLLLVQAVDANADATAITSYSLYGGSMILLFLASTLYHAIPHQRAKRWLKKFDH 88 (219)
T ss_pred CCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHccH
Confidence 34567899999999987643221 1 23467899999999999999999999987 489999999999
Q ss_pred chh----c--hHHHHHHHhcCCChhHHHHHH------HHh----hcc-ccchHHHH--HHHHHHHHHHHHHHh-cCCcch
Q 025757 140 AMI----A--TATVCLSRALRDENPKMLMAA------SAL----ALP-IQPLMVSA--VHTGMMEVAFAKRAL-NDPNLR 199 (248)
Q Consensus 140 ~aI----A--YTP~~l~~~l~~~~g~~lla~------~Gi----~~~-~~~~l~~~--l~mGW~~v~~~~~l~-~lp~~~ 199 (248)
++| | |||+++. .+++++++.++++ .|+ ++. ++|++++. ++|||++++.++++. .+|+.+
T Consensus 89 ~~I~llIaGsytP~~~~-~~~~~~~~~l~~~iW~~a~~Gi~~~~~~~~~~r~l~~~~Yl~mGw~~v~~~~~l~~~~~~~~ 167 (219)
T PRK15087 89 CAIYLLIAGTYTPFLLV-GLDSPLARGLMIVIWSLALLGILFKLAFAHRFKVLSLVTYLAMGWLSLIVIYQLAIKLAIGG 167 (219)
T ss_pred HHHHHHHHHhhHHHHHH-HccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHhCCHHH
Confidence 999 4 9999998 8888888876554 676 444 88999988 999999999999999 889999
Q ss_pred hchhhHHHHHHhhhhhhhccccc---CCCCchhhHHHHHHHHHHHH
Q 025757 200 MAHTVHKVSSLLGGVFFIADDVF---PETPYLHAAWHLAAAVGVGT 242 (248)
Q Consensus 200 l~~~~~~~lLl~GGi~YtiG~iF---~~~p~~HaIWHlfVl~Ga~t 242 (248)
+ .++++||++|++|++| |+.|++|+|||+||++|+.+
T Consensus 168 l------~~l~~GG~~Y~~G~~fY~~~~~p~~H~IwH~fVl~ga~~ 207 (219)
T PRK15087 168 V------TLLAVGGVVYSLGVIFYVCKRIPYNHAIWHGFVLGGSVC 207 (219)
T ss_pred H------HHHHHHhHHHHhhHHHHccCCCCCchhHHHHHHHHHHHH
Confidence 9 9999999999999999 57899999999999999854
No 2
>COG1272 Predicted membrane protein, hemolysin III homolog [General function prediction only]
Probab=100.00 E-value=7.9e-37 Score=271.76 Aligned_cols=160 Identities=24% Similarity=0.308 Sum_probs=142.8
Q ss_pred CCCHHHHHHHHHHHHHHHHHhc-------------ccchhHHHHHHHHHHHHHHHHHHhhhccCch--hHHHHHHHhhcc
Q 025757 76 DLHLLERVANVLTSLPFIALGL-------------QTPRKNLNMTLYANSLVGVGVTSSLYHSSRG--KLRKYLRWADYA 140 (248)
Q Consensus 76 ~~t~~EeiaN~iTH~~~i~~g~-------------~~~~~~~s~~IYg~sli~lf~~STlYH~~~~--~~r~~lrrlDH~ 140 (248)
.++..||.+|++||+++..+++ .+..+.++..+|+.|++.||++||+||+.+. |.|+++||+||+
T Consensus 15 ~~~~~~e~~n~~tHlvGail~i~~l~~l~~~a~~~~~~~~~~~~~iy~~sl~~l~~~St~YH~~~~~~~~k~~~rk~DH~ 94 (226)
T COG1272 15 SYSWHEEIANAITHLIGAILAIVGLVLLLVYALITGSALAVIVFSIYGLSLFLLFLVSTLYHSIPNGQKAKAILRKFDHS 94 (226)
T ss_pred cccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhHhhhhhHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHccHH
Confidence 6889999999999987644321 2467789999999999999999999999983 999999999999
Q ss_pred hh----c--hHHHHHHHhcCCChhHHHHHH------HHh----hcc-ccchHHHH--HHHHHHHHHHHHHHh-cCCcchh
Q 025757 141 MI----A--TATVCLSRALRDENPKMLMAA------SAL----ALP-IQPLMVSA--VHTGMMEVAFAKRAL-NDPNLRM 200 (248)
Q Consensus 141 aI----A--YTP~~l~~~l~~~~g~~lla~------~Gi----~~~-~~~~l~~~--l~mGW~~v~~~~~l~-~lp~~~l 200 (248)
+| | |||+|+. .+++.+++.++++ .|+ +++ ++|++++. ++|||++++.++++. .+|..++
T Consensus 95 ~I~vLIAgSyTP~~l~-~l~~~~~~~~~~iiW~lal~Gi~~kl~~~~~~r~ls~~~yl~mGw~~v~~~~~l~~~l~~~~~ 173 (226)
T COG1272 95 GIYVLIAGSYTPFLLV-GLYGPLGWILLGLIWGLALAGILFKLFFKKRFRKLSLVLYLAMGWLGLIVIKPLIAKLGLIGL 173 (226)
T ss_pred HHHHHHHHhhHHHhHH-HhccchHHHHHHHHHHHHHHHHhhhhhccCcCceeeehhhHHHHHHHHHHHHHHHHhCchHHH
Confidence 99 4 9999998 9999999988776 666 344 88999888 999999999999999 9999999
Q ss_pred chhhHHHHHHhhhhhhhccccc---C--CCCchhhHHHHHHHHHHHH
Q 025757 201 AHTVHKVSSLLGGVFFIADDVF---P--ETPYLHAAWHLAAAVGVGT 242 (248)
Q Consensus 201 ~~~~~~~lLl~GGi~YtiG~iF---~--~~p~~HaIWHlfVl~Ga~t 242 (248)
.++++||++||+|++| | +.|++|+|||+||++||++
T Consensus 174 ------~~l~~GGv~YsvG~ifY~~~~~~~~~~H~iwH~fVv~ga~~ 214 (226)
T COG1272 174 ------VLLALGGVLYSVGAIFYVLRIDRIPYSHAIWHLFVVGGAAC 214 (226)
T ss_pred ------HHHHHHhHHheeeeEEEEEeeccCCchHHHHHHHHHHHHHH
Confidence 9999999999999999 5 6899999999999999854
No 3
>KOG4243 consensus Macrophage maturation-associated protein [Defense mechanisms]
Probab=99.97 E-value=8.7e-33 Score=245.52 Aligned_cols=202 Identities=22% Similarity=0.219 Sum_probs=163.8
Q ss_pred ccchhhhccccccccCcccCccchhHHHHHHHHHhcCCCCCCCcccCCCCCCCHHHHHHHHHHHHHHHHHhc--------
Q 025757 26 PFALKEITEHEDYESTCKSSFIGANQFLLMQRAWQQRPSCLRPIRGCIHGDLHLLERVANVLTSLPFIALGL-------- 97 (248)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~r~~~~r~~~~~p~~~~~~~~~t~~EeiaN~iTH~~~i~~g~-------- 97 (248)
.|+.+|..-+++-.||-.+.+.-..|. +-+|+||+|++++++| ++|..|++||++||++.|.-++
T Consensus 37 ~fsf~~nv~~e~~~s~~fs~s~l~~k~-r~~~~kN~ra~~g~aY------qPT~~EhvAN~~tHai~I~PaIl~~~~l~~ 109 (298)
T KOG4243|consen 37 HFSFDSNVLVEKSTSPQFSFSALRFKN-RFQRFKNHRAPAGGAY------QPTEYEHVANCYTHAIWIVPAILGSALLHR 109 (298)
T ss_pred hhhhhhhHHHhhcCCcccChHHHHHHH-HHHHHhhccCCCCCCC------CCchHHHHHhhHhhHhhhhHHHHHHHHHHH
Confidence 367777666666555554444444444 4479999999988888 6999999999999987764211
Q ss_pred --ccchhHHHHHHHHHHHHHHHHHHhhhccCc------h---hHHHHHHHhhcchh----c--hHHHHHHHhcCC-----
Q 025757 98 --QTPRKNLNMTLYANSLVGVGVTSSLYHSSR------G---KLRKYLRWADYAMI----A--TATVCLSRALRD----- 155 (248)
Q Consensus 98 --~~~~~~~s~~IYg~sli~lf~~STlYH~~~------~---~~r~~lrrlDH~aI----A--YTP~~l~~~l~~----- 155 (248)
.+.++.+.++|||..+++||++||.||.+. + +.|.+|+++|.++| | |+|++-+|-++.
T Consensus 110 ~s~~d~q~i~awIYG~~lc~LFt~STvfH~~~~~~~hqn~~r~l~~~lH~cDRa~IY~FIAaSY~PWLtLr~~g~~~~~m 189 (298)
T KOG4243|consen 110 LSDDDWQKITAWIYGMGLCALFTVSTVFHIVSWKKSHQNKLRTLEHCLHMCDRAVIYFFIAASYAPWLTLRELGPLASHM 189 (298)
T ss_pred hhhhHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhhhhhhcccccccHHhhCcHHHHH
Confidence 356889999999999999999999999863 1 57889999999999 4 999999887765
Q ss_pred ChhHHHHHHHHh----hcc-ccchHHHH--HHHHHHHHHHHHHHhcCCcchhchhhHHHHHHhhhhhhhccccc----CC
Q 025757 156 ENPKMLMAASAL----ALP-IQPLMVSA--VHTGMMEVAFAKRALNDPNLRMAHTVHKVSSLLGGVFFIADDVF----PE 224 (248)
Q Consensus 156 ~~g~~lla~~Gi----~~~-~~~~l~~~--l~mGW~~v~~~~~l~~lp~~~l~~~~~~~lLl~GGi~YtiG~iF----~~ 224 (248)
+|-.|+|+++|| +|. |++.++++ +.||.-+.+++-.+ ....++ .+|..||.+|++|++| ..
T Consensus 190 ~W~IWlmA~~Gi~Yq~~fHErYK~lEt~~Ylvmg~gPalvv~sm--~~~~Gl------~~l~~GG~~Y~lGvvFFK~DG~ 261 (298)
T KOG4243|consen 190 RWFIWLMAAGGIIYQFLFHERYKVLETFFYLVMGFGPALVVTSM--NNTDGL------QELATGGLFYCLGVVFFKSDGI 261 (298)
T ss_pred HHHHHHHHhcchhhhhhHHHHHHHHHHHHHHHHhcCceEEEEEe--CCchhH------HHHHhCCEEEEEEEEEEecCCc
Confidence 477799999999 455 99999998 99998877665554 457888 9999999999999999 56
Q ss_pred CCchhhHHHHHHHHHHHH
Q 025757 225 TPYLHAAWHLAAAVGVGT 242 (248)
Q Consensus 225 ~p~~HaIWHlfVl~Ga~t 242 (248)
+||.|+|||+||+.||+|
T Consensus 262 ipfAHAIWHLFV~l~A~c 279 (298)
T KOG4243|consen 262 IPFAHAIWHLFVALAAGC 279 (298)
T ss_pred eehHHHHHHHHHHHHcch
Confidence 899999999999999853
No 4
>TIGR01065 hlyIII channel protein, hemolysin III family. This family includes proteins from pathogenic and non-pathogenic bacteria, Homo sapiens and Drosophila. In Bacillus cereus, a pathogen, it has been show to function as a channel-forming cytolysin. The human protein is expressed preferentially in mature macrophages, consistent with a role cytolytic role.
Probab=99.97 E-value=5.4e-31 Score=229.88 Aligned_cols=155 Identities=25% Similarity=0.303 Sum_probs=131.6
Q ss_pred HHHHHHHHHHHHHHHhc-------------ccchhHHHHHHHHHHHHHHHHHHhhhccCc--hhHHHHHHHhhcchh---
Q 025757 81 ERVANVLTSLPFIALGL-------------QTPRKNLNMTLYANSLVGVGVTSSLYHSSR--GKLRKYLRWADYAMI--- 142 (248)
Q Consensus 81 EeiaN~iTH~~~i~~g~-------------~~~~~~~s~~IYg~sli~lf~~STlYH~~~--~~~r~~lrrlDH~aI--- 142 (248)
||.+|++||++++.+++ .+..+++++.+|+++++.+|++||+||..+ .+.++++||+||++|
T Consensus 1 ~e~~N~~tH~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~vy~~~~~~~~~~St~yH~~~~s~~~~~~~~rlD~~gI~~l 80 (204)
T TIGR01065 1 EEIANAITHGIGAVLSIIALALLVIYSWDHGGAVAVLGFSIYGISLILLFLVSTLYHSIPKGSKAKNWLRKIDHSMIYVL 80 (204)
T ss_pred CchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHCCcCchhHHHHHHHccHHHHHHH
Confidence 79999999987543221 123478999999999999999999999876 389999999999999
Q ss_pred -c--hHHHHHHHhcCCChhHHHHHH------HHh----hcc-ccchHHHH--HHHHHHHHHHHHHHh-cCCcchhchhhH
Q 025757 143 -A--TATVCLSRALRDENPKMLMAA------SAL----ALP-IQPLMVSA--VHTGMMEVAFAKRAL-NDPNLRMAHTVH 205 (248)
Q Consensus 143 -A--YTP~~l~~~l~~~~g~~lla~------~Gi----~~~-~~~~l~~~--l~mGW~~v~~~~~l~-~lp~~~l~~~~~ 205 (248)
| |||+++. .+.+.+++.++.+ .|+ ++. ++|++++. ++|||+++..++++. ..+..++
T Consensus 81 IaGsytP~~~~-~~~~~~~~~~~~~iw~la~~gi~~~~~~~~~~r~~r~~~y~~~G~~~v~~~~~~~~~~~~~~~----- 154 (204)
T TIGR01065 81 IAGTYTPFLLL-ALPGPLGWTVLWIIWGLAIGGIIYKLFFHKRPRWLSLFLYLIMGWLVVLVIKPLYHNLPGAGF----- 154 (204)
T ss_pred HHHhhHHHHHH-HcCCcHHHHHHHHHHHHHHHHHHHHHHccCCCchhHHHHHHHHHHHHHHHHHHHHHhCCHHHH-----
Confidence 3 9999998 8888888776554 566 344 78888888 999999999999888 8888888
Q ss_pred HHHHHhhhhhhhccccc---C-CCCch-hhHHHHHHHHHHHH
Q 025757 206 KVSSLLGGVFFIADDVF---P-ETPYL-HAAWHLAAAVGVGT 242 (248)
Q Consensus 206 ~~lLl~GGi~YtiG~iF---~-~~p~~-HaIWHlfVl~Ga~t 242 (248)
.++++||++|++|++| | +.|+. |+|||+||++|+.+
T Consensus 155 -~~l~~gg~~Y~~G~~fY~~~~p~~~~~H~iwH~fV~~g~~~ 195 (204)
T TIGR01065 155 -SLLAAGGLLYTVGAIFYALKWPIPFTYHAIWHLFVLGASAC 195 (204)
T ss_pred -HHHHHHhHHHHcchHheeecCCCCCCcChHHHHHHHHHHHH
Confidence 8999999999999999 3 56788 99999999999854
No 5
>PF03006 HlyIII: Haemolysin-III related; InterPro: IPR004254 Members of this family are integral membrane proteins. This family includes proteins that are hemolysin-III homologs.; GO: 0016021 integral to membrane
Probab=99.87 E-value=9.9e-22 Score=169.61 Aligned_cols=158 Identities=19% Similarity=0.213 Sum_probs=122.2
Q ss_pred CHHHHHHHHHHHHHHHHHh----c--------c--cchhHHHHHHHHHHHHHHHHHHhhhccCc---h-hHHHHHHHhhc
Q 025757 78 HLLERVANVLTSLPFIALG----L--------Q--TPRKNLNMTLYANSLVGVGVTSSLYHSSR---G-KLRKYLRWADY 139 (248)
Q Consensus 78 t~~EeiaN~iTH~~~i~~g----~--------~--~~~~~~s~~IYg~sli~lf~~STlYH~~~---~-~~r~~lrrlDH 139 (248)
+.-||.+|++||++++.+. . . +........+|..+.+.+|++||+||... . +.+++++++||
T Consensus 2 ~~hNEt~NiwtHll~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~St~yH~f~~~s~~~~~~~~~~lD~ 81 (222)
T PF03006_consen 2 QLHNETVNIWTHLLGAILFLALLIFLLSLASSPSFSPWDYIPFLIYLLSAILCFLCSTLYHLFSCHSEGKVYHIFLRLDY 81 (222)
T ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhHHHhhCCCcCCcHHHHHHHHhcch
Confidence 4569999999998754322 0 1 23578999999999999999999999954 3 79999999999
Q ss_pred chh----c--hHHHHHHHhc--CCChhHHHHHH------HHh---hc-----cccchHHHH--HHHHHHHHHHHHHHh-c
Q 025757 140 AMI----A--TATVCLSRAL--RDENPKMLMAA------SAL---AL-----PIQPLMVSA--VHTGMMEVAFAKRAL-N 194 (248)
Q Consensus 140 ~aI----A--YTP~~l~~~l--~~~~g~~lla~------~Gi---~~-----~~~~~l~~~--l~mGW~~v~~~~~l~-~ 194 (248)
++| + |||.+.. .+ .+.+++..+++ .|+ .. ++.+++++. +.|||..++.+.... .
T Consensus 82 ~gI~l~i~gs~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~r~~~~~~~g~~~~~p~~~~~~~ 160 (222)
T PF03006_consen 82 AGIFLLIAGSYTPFIYY-GFYCHPWLGWFYLAFIWILALIGIVLSLFPCFSSPRFRWLRTIFFLLLGWSGIIPIFHRIFF 160 (222)
T ss_pred hhhhHhHhhhhhhHHHh-hccccchHHHHHHHHHHHHHHHhHHhhcchhhcCCccceeeehHhHHHHHHHHhhhHHHHHH
Confidence 999 2 9999998 77 35566654443 555 11 144556665 999999998888744 6
Q ss_pred CCcch----hchhhHHHHHHhhhhhhhccccc---C------CCCc-----hhhHHHHHHHHHHHH
Q 025757 195 DPNLR----MAHTVHKVSSLLGGVFFIADDVF---P------ETPY-----LHAAWHLAAAVGVGT 242 (248)
Q Consensus 195 lp~~~----l~~~~~~~lLl~GGi~YtiG~iF---~------~~p~-----~HaIWHlfVl~Ga~t 242 (248)
++..+ + .+++.||++|++|++| + +.|+ .|.|||+||++|+.+
T Consensus 161 ~~~~~~~~~~------~~~~~~~~~y~~G~~fy~~~~PEr~~pg~fD~~g~sHqi~Hi~v~~~~~~ 220 (222)
T PF03006_consen 161 LGGWGSPDPL------WLLILGGVLYLLGAVFYATRIPERWFPGKFDIWGHSHQIWHIFVVLAALC 220 (222)
T ss_pred hccccchHHH------HHHHHHHHHHHHhHHHhhhccccccCCCCcCCCCccHHHHHHHHHHHHHH
Confidence 66555 5 8899999999999999 2 3456 899999999999854
No 6
>KOG0748 consensus Predicted membrane proteins, contain hemolysin III domain [General function prediction only; Signal transduction mechanisms]
Probab=98.60 E-value=6e-07 Score=82.99 Aligned_cols=164 Identities=15% Similarity=0.129 Sum_probs=87.7
Q ss_pred CCHHHHHHHHHHHHHHHHH----hcc-----c----chhHHHHHHHHHHHHHHHHHHhhhccCch---hHHHHHHHhhcc
Q 025757 77 LHLLERVANVLTSLPFIAL----GLQ-----T----PRKNLNMTLYANSLVGVGVTSSLYHSSRG---KLRKYLRWADYA 140 (248)
Q Consensus 77 ~t~~EeiaN~iTH~~~i~~----g~~-----~----~~~~~s~~IYg~sli~lf~~STlYH~~~~---~~r~~lrrlDH~ 140 (248)
.+.-.|..|..||+++.++ .+. . .....-..+|-.+ ....|++||.++. +.++.|.++||+
T Consensus 45 f~~hNEt~NiwTHLlg~i~f~~~~~~~~~~~~~~~~~~~~~~~~lf~~~---~~~~S~~~H~~~~~s~~~~~~~~~lDY~ 121 (286)
T KOG0748|consen 45 FQWHNETLNIWTHLLGFILFLFLLILFMPRVLLPVDSHLSEKIFLFFLG---CLLLSSLYHLFSCHSEKVSRFFLKLDYA 121 (286)
T ss_pred HHhhcccchhHHHHHHHHHHHHHHHHHcccccccccccchHHHHHHHHH---HHHHHHHHHHHhcccHHHHHHHHHccHH
Confidence 3455688999999865331 110 0 0000002222222 1222999998763 899999999999
Q ss_pred hh-----c-hHHHHHHHhcCCC--hhHHHHHH---HHh------hccc---c--chHHHH--HHHHHHHH-HHHHHHhcC
Q 025757 141 MI-----A-TATVCLSRALRDE--NPKMLMAA---SAL------ALPI---Q--PLMVSA--VHTGMMEV-AFAKRALND 195 (248)
Q Consensus 141 aI-----A-YTP~~l~~~l~~~--~g~~lla~---~Gi------~~~~---~--~~l~~~--l~mGW~~v-~~~~~l~~l 195 (248)
+| + +.|.... ++... +....+.+ +|+ ..++ + +-.... +.||-..+ .+.-.+...
T Consensus 122 GIs~li~gS~~~~~yy-~f~c~~~~~~iy~~~~~~lgi~~~~~~l~~~~~~~~~r~~R~~~f~~~~~~~i~P~~h~~~~~ 200 (286)
T KOG0748|consen 122 GISLLIIGSFLPIIYY-AFYCHPFFRLIYLPIILVLGLLAIFVSLSDKFRTPKRRPLRAGVFLLLGLSGILPLLHRLILF 200 (286)
T ss_pred hhHHHHHHHHHHHHHH-hcccchHHHHHHHHHHHHHHHHHheeechhhhCCccchhhHHHHHHHHHHhhccHhhhheeee
Confidence 99 2 6666555 45432 22222221 333 1111 1 122232 77774444 333333322
Q ss_pred CcchhchhhHHHHHHhhhhhhhccccc--CCC-----C-------chhhHHHHHHHHHHHHhh
Q 025757 196 PNLRMAHTVHKVSSLLGGVFFIADDVF--PET-----P-------YLHAAWHLAAAVGVGTCN 244 (248)
Q Consensus 196 p~~~l~~~~~~~lLl~GGi~YtiG~iF--~~~-----p-------~~HaIWHlfVl~Ga~t~~ 244 (248)
+..+...+.=.......+++|.+|++| .++ | ..|-|||++|++|+....
T Consensus 201 g~~~~~~~~~~~~~~~~~~~yi~ga~fY~~riPER~~PGkfD~~G~SHQifHv~vv~~a~~~~ 263 (286)
T KOG0748|consen 201 GGRGPEVVIALGYVILMAVLYLLGALFYATRIPERWFPGKFDIWGHSHQIFHVLVVLAALFHL 263 (286)
T ss_pred cCCccceehhhhHHHHHHHHHHHHHHHhhcCCCcccCCCccceeCChhHHHHHHHHHHHHHHH
Confidence 221100111115567778888888888 222 3 369999999999986543
No 7
>PF05875 Ceramidase: Ceramidase; InterPro: IPR008901 This entry consists of several ceramidases. Ceramidases are enzymes involved in regulating cellular levels of ceramides, sphingoid bases, and their phosphates.; GO: 0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides, 0006672 ceramide metabolic process, 0016021 integral to membrane
Probab=98.34 E-value=1e-05 Score=72.87 Aligned_cols=166 Identities=20% Similarity=0.240 Sum_probs=91.4
Q ss_pred CCHHHHHHHHHHHHHHHHHhcccc------hhHHHHHHHHHHHHHHHHHHhhhccCchhHHHHHHHhhcchh--c---hH
Q 025757 77 LHLLERVANVLTSLPFIALGLQTP------RKNLNMTLYANSLVGVGVTSSLYHSSRGKLRKYLRWADYAMI--A---TA 145 (248)
Q Consensus 77 ~t~~EeiaN~iTH~~~i~~g~~~~------~~~~s~~IYg~sli~lf~~STlYH~~~~~~r~~lrrlDH~aI--A---YT 145 (248)
....-|-.|.+|+++++++|+... .......+..++++++++-|++||+ ..+...|.+|-..| + +.
T Consensus 21 s~yiAEf~NtlSNl~fi~~al~gl~~~~~~~~~~~~~l~~~~l~~VGiGS~~FHa---Tl~~~~ql~DelPMl~~~~~~~ 97 (262)
T PF05875_consen 21 SPYIAEFWNTLSNLAFIVAALYGLYLARRRGLERRFALLYLGLALVGIGSFLFHA---TLSYWTQLLDELPMLWATLLFL 97 (262)
T ss_pred CcccchHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHHHHHHHHHhHHHHHh---ChhhhHHHhhhhhHHHHHHHHH
Confidence 445788999999999887665211 1123446667788999999999998 44567888998888 2 22
Q ss_pred HHHHHHhc-CCChhHHH---HHHHHh-----hcc-ccchHHHH--HHHHHHHHHHHHHHh-c-CCcchhchhhHHHHHHh
Q 025757 146 TVCLSRAL-RDENPKML---MAASAL-----ALP-IQPLMVSA--VHTGMMEVAFAKRAL-N-DPNLRMAHTVHKVSSLL 211 (248)
Q Consensus 146 P~~l~~~l-~~~~g~~l---la~~Gi-----~~~-~~~~l~~~--l~mGW~~v~~~~~l~-~-lp~~~l~~~~~~~lLl~ 211 (248)
=..+.+.. ....+..+ +.+.++ .+. +.+.+... ..+....++...... . .++. ...+..+.+...
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~L~~~~~~~t~~~~~~~~p~~~~~~f~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~ 176 (262)
T PF05875_consen 98 YIVLTRRYSSPRYRLALPLLLFIYAVVVTVLYFVLDNPVFHQIAFASLVLLVILRSIYLIRRRVRDA-CRRRRARRLLLF 176 (262)
T ss_pred HHHhcccccCchhhHHHHHHHHHHHHHHHHHHhhhccchhhhhhHHHHHHHHHHHHHHHHHHhcCch-hhchHHHHHHHH
Confidence 22222111 11122211 111122 111 23333222 222222222222222 1 1111 111222356778
Q ss_pred hhhhhhccccc--------C-----CCCc---------hhhHHHHHHHHHHHHhhhh
Q 025757 212 GGVFFIADDVF--------P-----ETPY---------LHAAWHLAAAVGVGTCNKL 246 (248)
Q Consensus 212 GGi~YtiG~iF--------~-----~~p~---------~HaIWHlfVl~Ga~t~~~l 246 (248)
|++.|.+|-.+ + +.++ .|+.||+++.+|+..+..+
T Consensus 177 ~~~~f~~a~~~W~iD~~~C~~~~~~~~~~g~p~~~~le~H~~WHilt~ig~Y~~~~~ 233 (262)
T PF05875_consen 177 GLALFLVAFFFWNIDRIFCSSLRAIRFPYGLPLGFLLELHAWWHILTGIGAYLLIVF 233 (262)
T ss_pred HHHHHHHHHHHHHhHHHHHccccccccccCCcchhHHhHHHHHHHHHHHHHHHHHHH
Confidence 88899998887 1 1123 8999999999999877654
No 8
>PF12036 DUF3522: Protein of unknown function (DUF3522); InterPro: IPR021910 This family of proteins is functionally uncharacterised. This protein is found in eukaryotes. Proteins in this family are typically between 220 to 787 amino acids in length.
Probab=94.42 E-value=0.22 Score=43.36 Aligned_cols=150 Identities=16% Similarity=0.204 Sum_probs=68.9
Q ss_pred HHHHHHHHHHHHHHHHhccc--chhHHHHHHHHHHHHHHHHHHhhhccCc-hh-----HHHHHHHhhcchh-----c--h
Q 025757 80 LERVANVLTSLPFIALGLQT--PRKNLNMTLYANSLVGVGVTSSLYHSSR-GK-----LRKYLRWADYAMI-----A--T 144 (248)
Q Consensus 80 ~EeiaN~iTH~~~i~~g~~~--~~~~~s~~IYg~sli~lf~~STlYH~~~-~~-----~r~~lrrlDH~aI-----A--Y 144 (248)
..-+.-.+||+.++...... .+...-+.+|..+| .+|+.||+.. .+ ..--+.++|.+.. + -
T Consensus 6 ~~~l~l~lSnl~~lP~i~~a~rr~~~~Ea~v~~~tm----~~S~~YHacd~~~~~~~lc~~~~~~L~~~~~~~s~~~~~v 81 (186)
T PF12036_consen 6 LQFLLLTLSNLAFLPTIYVAVRRRYHFEAFVYTFTM----FFSTFYHACDSGPGEIFLCIMDWHRLQNIDFIGSFLSIWV 81 (186)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH----HHHHhcccccCCCCceEEeechHHHHHHHHHHHHHHHHHH
Confidence 34455566776554322111 22345566777665 6799999985 21 1222344444433 3 5
Q ss_pred HHHHHHHhcCCChhHHH--HHHHHh-hcc---ccchHHHH--HHHHHHHHHHHHHHh--cCCcchhc-hhhHHHHHHhhh
Q 025757 145 ATVCLSRALRDENPKML--MAASAL-ALP---IQPLMVSA--VHTGMMEVAFAKRAL--NDPNLRMA-HTVHKVSSLLGG 213 (248)
Q Consensus 145 TP~~l~~~l~~~~g~~l--la~~Gi-~~~---~~~~l~~~--l~mGW~~v~~~~~l~--~lp~~~l~-~~~~~~lLl~GG 213 (248)
|..++. .++..+...+ +++..+ +.. +.+...+. ++.|-+.+.+..-.. +.+..-.. +..=...++.|.
T Consensus 82 tl~~~a-~~~~~~~~~l~~~~~~~~ai~~~~~~~~~~~~~~Pi~~~~~i~~~~w~~r~~~~~~~~~~~~~~~~~~l~~g~ 160 (186)
T PF12036_consen 82 TLCAMA-RLDEPLKSVLHYFGALVIAIFQQKDRWSLWNTIGPILIGLLILLVSWLYRCRRRRRCYPPSWRRWLFYLLPGI 160 (186)
T ss_pred HHHHhc-cCCHHHHHHHHHHHHHHHHHHHhhCcccchhhHHHHHHHHHHHHHHHheecccCCccCChHHHHHHHHHHHHH
Confidence 555543 4444432222 222222 221 22222333 555544443322111 11111000 000113456666
Q ss_pred hhhhcccc-c----CCCCchhhHHHH
Q 025757 214 VFFIADDV-F----PETPYLHAAWHL 234 (248)
Q Consensus 214 i~YtiG~i-F----~~~p~~HaIWHl 234 (248)
++.++|.. | ++..+.|.+||+
T Consensus 161 ~~~~~Gl~~f~et~dnY~~~HSlWHi 186 (186)
T PF12036_consen 161 IFFILGLDLFLETNDNYRIVHSLWHI 186 (186)
T ss_pred HHHHHHHhHhhcCCCcEEEEeeeeeC
Confidence 78888876 3 234578999995
No 9
>KOG2329 consensus Alkaline ceramidase [Lipid transport and metabolism]
Probab=92.91 E-value=0.12 Score=47.94 Aligned_cols=63 Identities=24% Similarity=0.245 Sum_probs=43.5
Q ss_pred CCHHHHHHHHHHHHHHHHHhc----ccchhHHH--HHHHHHHHHHHHHHHhhhccCchhHHHHHHHhhcchh
Q 025757 77 LHLLERVANVLTSLPFIALGL----QTPRKNLN--MTLYANSLVGVGVTSSLYHSSRGKLRKYLRWADYAMI 142 (248)
Q Consensus 77 ~t~~EeiaN~iTH~~~i~~g~----~~~~~~~s--~~IYg~sli~lf~~STlYH~~~~~~r~~lrrlDH~aI 142 (248)
.....|.+|..|..+++.++. ++.++.+. +.+=+.++..+.+.|.+||+ ..+..+|-+|-.++
T Consensus 29 s~yIAEf~NT~sN~~fil~~~~~l~~~y~~~~e~~~~l~~v~~~ivgl~S~~fH~---TL~~~~QllDElam 97 (276)
T KOG2329|consen 29 SPYIAEFANTESNSPFILLAFIGLHCAYRQKLEKRAYLICVLFTIVGLGSMYFHM---TLVYKGQLLDELAM 97 (276)
T ss_pred hHHHHHHHHHhhcchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhhhh---hHHHhheehhhhhH
Confidence 345789999999998885432 22333333 33335667778899999998 45567788888777
No 10
>PF04080 Per1: Per1-like ; InterPro: IPR007217 A member of this family has been implemented in protein processing in the endoplasmic reticulum [].
Probab=61.50 E-value=1.3e+02 Score=27.94 Aligned_cols=61 Identities=15% Similarity=0.103 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHHHHHHHh---cc-cchhHHHHHHHHHHHHHHHHHHhhhccCchhHHHHHHHhhcchh
Q 025757 79 LLERVANVLTSLPFIALG---LQ-TPRKNLNMTLYANSLVGVGVTSSLYHSSRGKLRKYLRWADYAMI 142 (248)
Q Consensus 79 ~~EeiaN~iTH~~~i~~g---~~-~~~~~~s~~IYg~sli~lf~~STlYH~~~~~~r~~lrrlDH~aI 142 (248)
..=-++|.++|.-++..- .. .....-...+|+..-+.-.+.||+||.-... +=.++||.+=
T Consensus 58 v~FSllNl~~h~~~~~~~~~~~~~~~p~~~~~~~~~~v~~naW~wStvFH~RD~~---~TE~lDYf~A 122 (267)
T PF04080_consen 58 VLFSLLNLLAHYRGLRKFRRQVPRNSPMYPYYIIYAIVSMNAWIWSTVFHTRDTP---LTEKLDYFSA 122 (267)
T ss_pred HHHHHHhHHHHHHHHHHHHHhccCCCCCcCeeehHHHHHHHHHHHHHHHHHhccc---HhhHhHHhhh
Confidence 334455666666554311 11 1111222678888888888999999983323 3347898765
No 11
>KOG2970 consensus Predicted membrane protein [Function unknown]
Probab=56.74 E-value=54 Score=31.25 Aligned_cols=61 Identities=16% Similarity=0.071 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHHHHHHHh---cc-c--chhHHHHHHHHHHHHHHHHHHhhhccCchhHHHHHHHhhcchh
Q 025757 79 LLERVANVLTSLPFIALG---LQ-T--PRKNLNMTLYANSLVGVGVTSSLYHSSRGKLRKYLRWADYAMI 142 (248)
Q Consensus 79 ~~EeiaN~iTH~~~i~~g---~~-~--~~~~~s~~IYg~sli~lf~~STlYH~~~~~~r~~lrrlDH~aI 142 (248)
..=-+.|.++|.-++..- .+ + .+.--...||+.--..-...|+++|.-.. .+=+++||.+=
T Consensus 108 viFS~lNl~~h~~g~~~~r~~~~~~~~~r~~~l~~I~a~i~mnawiwSsvFH~rD~---~lTEklDYf~A 174 (319)
T KOG2970|consen 108 VIFSFLNLITHYKGLVKFRRPKKPNRPTRYERLWLIYAYIGMNAWIWSSVFHIRDV---PLTEKLDYFSA 174 (319)
T ss_pred HHHHHHHHHHHHHHHhheecccCCCCcchhccchhhHHHHHHHHHHHHHhhhhcCC---chHhhhhHHHH
Confidence 334456777776654421 11 1 11114566777776677799999998443 23356788765
No 12
>COG5500 Predicted integral membrane protein [Function unknown]
Probab=45.37 E-value=33 Score=28.98 Aligned_cols=45 Identities=20% Similarity=0.290 Sum_probs=27.2
Q ss_pred cchHHHH-HHHHHHHHHHHHHHh-cCCcchhchhhHHHHHHhhhhhhhccccc
Q 025757 172 QPLMVSA-VHTGMMEVAFAKRAL-NDPNLRMAHTVHKVSSLLGGVFFIADDVF 222 (248)
Q Consensus 172 ~~~l~~~-l~mGW~~v~~~~~l~-~lp~~~l~~~~~~~lLl~GGi~YtiG~iF 222 (248)
.|.+-+. ++.|-++++.+-... .-...+- .+|++|+++|-+|..-
T Consensus 55 nPlFmtAf~GTgllcliLl~~a~~gW~~pgs------y~Llag~l~YlvGt~~ 101 (159)
T COG5500 55 NPLFMTAFLGTGLLCLILLISALLGWHQPGS------YYLLAGSLLYLVGTFG 101 (159)
T ss_pred ChHHHHHHHhhhHHHHHHHHHHHhccCCCCc------hhhhhhhhhheecCce
Confidence 3444444 666666555444333 2233334 6799999999999874
No 13
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=30.64 E-value=48 Score=30.61 Aligned_cols=44 Identities=25% Similarity=0.261 Sum_probs=30.1
Q ss_pred cccCcccCccchhHHHHHHHH---------HhcCCCCCCCcccCCCCCCCHHHHHHHHH
Q 025757 38 YESTCKSSFIGANQFLLMQRA---------WQQRPSCLRPIRGCIHGDLHLLERVANVL 87 (248)
Q Consensus 38 ~~~~~~~~~~~~~q~~~~~r~---------~~~r~~~~~p~~~~~~~~~t~~EeiaN~i 87 (248)
.+.|+-.-+.|-.||||++|. |..+-+.+-|+ .....||+..-+
T Consensus 143 L~~sa~~LSGGQQQRLcIARalAv~PeVlLmDEPtSALDPI------sT~kIEeLi~eL 195 (253)
T COG1117 143 LHKSALGLSGGQQQRLCIARALAVKPEVLLMDEPTSALDPI------STLKIEELITEL 195 (253)
T ss_pred hhCCccCCChhHHHHHHHHHHHhcCCcEEEecCcccccCch------hHHHHHHHHHHH
Confidence 456666778999999999987 55555666666 244567765433
No 14
>PF13965 SID-1_RNA_chan: dsRNA-gated channel SID-1
Probab=20.77 E-value=65 Score=32.98 Aligned_cols=25 Identities=20% Similarity=0.175 Sum_probs=20.8
Q ss_pred HHHHHHHHHHHHHHHHHhhhccCch
Q 025757 104 LNMTLYANSLVGVGVTSSLYHSSRG 128 (248)
Q Consensus 104 ~s~~IYg~sli~lf~~STlYH~~~~ 128 (248)
.-.-..|++|++.++.|++||.+++
T Consensus 314 ~~~~~~g~~li~egi~sa~yh~CPn 338 (570)
T PF13965_consen 314 GLFYAMGLALIMEGILSACYHICPN 338 (570)
T ss_pred hhHHHHHHHHHHHHHHHHHhhcCcC
Confidence 4455668999999999999999874
Done!