BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025760
(248 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9JIM5|YIPF7_MOUSE Protein YIPF7 OS=Mus musculus GN=Yipf7 PE=2 SV=1
Length = 254
Score = 133 bits (335), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 81/239 (33%), Positives = 135/239 (56%), Gaps = 10/239 (4%)
Query: 13 PSGGNPTTAGNINQRRVPTAPFQPNRPASSAIPFMSFDIGSA--TPASYGGPISTSTSAG 70
PS + GN+ R P A QP+ PA + F+ D G PAS S S S
Sbjct: 23 PSCNDSNAYGNVYGYREPQATEQPSSPAPPEM-FLPSDYGGQLFQPASNLDYYSQSPSVD 81
Query: 71 GSASFDDEEPLLDELGIHPDQIWKKTKSILNPFR-VNPTVHKGSDLSGPIVLYLSFGLFQ 129
+FD+E PLL+ELGI+ D IW+KT ++LNP + + ++ +DL+GPI+ ++ G
Sbjct: 82 ---TFDEEPPLLEELGINFDHIWQKTLTVLNPMKPADGSIMNETDLTGPILFCVALGATL 138
Query: 130 LLAGKLQFGVILGWIVVSSIFLYVVFNMLAGRNGNLDLHTCTSVVGYCMLPVVILAAFSL 189
L+AGK QFG + G + + ++ + N+++ N + SV+GYC+LP+V+L++ ++
Sbjct: 139 LMAGKAQFGYVYGMSAIGCLGIHALLNLMS--NSGVSYGCVASVLGYCLLPMVLLSSCAV 196
Query: 190 FLPQGGAIRFAVSAVFVLWAARASTNLMVSLADGGEEHRGLIAYACFLIYTLFSLLVIF 248
F G I + + + W + +++ + +S A E + L+AY C L+Y LF+LL +F
Sbjct: 197 FFSLQGTIGTMSALLIITWCSLSASKIFIS-ALAMEGQQLLVAYPCALLYGLFALLTVF 254
>sp|Q8N8F6|YIPF7_HUMAN Protein YIPF7 OS=Homo sapiens GN=YIPF7 PE=1 SV=2
Length = 280
Score = 129 bits (325), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/239 (34%), Positives = 132/239 (55%), Gaps = 10/239 (4%)
Query: 14 SGGNPTTAGNINQRRVPTAPFQPNRPASSAIPFMSFDIGSATPASYGGPISTSTSAGGS- 72
SG + GN+ R A QP +PAS M G A + P S S S
Sbjct: 48 SGNDSNAYGNLYGSRKQQAGEQP-QPASFVPSEMLMSSGYA--GQFFQPASNSDYYSQSP 104
Query: 73 --ASFDDEEPLLDELGIHPDQIWKKTKSILNPFR-VNPTVHKGSDLSGPIVLYLSFGLFQ 129
SFD+E PLL+ELGIH D IW+KT ++LNP + V+ ++ +DL+GPI+ ++ G
Sbjct: 105 YIDSFDEEPPLLEELGIHFDHIWQKTLTVLNPMKPVDGSIMNETDLTGPILFCVALGATL 164
Query: 130 LLAGKLQFGVILGWIVVSSIFLYVVFNMLAGRNGNLDLHTCTSVVGYCMLPVVILAAFSL 189
LLAGK+QFG + G + + ++ + N+++ + + SV+GYC+LP+VIL+ ++
Sbjct: 165 LLAGKVQFGYVYGMSAIGCLVIHALLNLMS--SSGVSYGCVASVLGYCLLPMVILSGCAM 222
Query: 190 FLPQGGAIRFAVSAVFVLWAARASTNLMVSLADGGEEHRGLIAYACFLIYTLFSLLVIF 248
F G S V + W + +++ + ++ A E + L+AY C ++Y LF+LL IF
Sbjct: 223 FFSLQGIFGIMSSLVIIGWCSLSASKIFIA-ALHMEGQQLLVAYPCAILYGLFALLTIF 280
>sp|Q7SXS2|YIPF5_XENLA Protein YIPF5 OS=Xenopus laevis GN=yipf5 PE=2 SV=1
Length = 256
Score = 125 bits (315), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/228 (32%), Positives = 134/228 (58%), Gaps = 26/228 (11%)
Query: 23 NINQRRVPTAPFQPNRPASSAIPFMSFDIGSATPASYGGPISTSTSAGGSASFDDEEPLL 82
+NQ++ P Q +P + P +AT + YG ++FDDE PLL
Sbjct: 53 EMNQQQQPYTG-QIYQPTQTYTP-------TATESVYG------------STFDDEPPLL 92
Query: 83 DELGIHPDQIWKKTKSILNPFRV-NPTVHKGSDLSGPIVLYLSFGLFQLLAGKLQFGVIL 141
+ELGI+ D IW+KT ++L+P +V + ++ +DL+GP+V L+FG LLAGK+QFG +
Sbjct: 93 EELGINFDHIWQKTLTVLHPLKVADGSIMNETDLAGPMVFCLAFGATLLLAGKIQFGYVY 152
Query: 142 GWIVVSSIFLYVVFNMLAGRNGNLDLHTCTSVVGYCMLPVVILAAFSLFLPQGGAIRFAV 201
G + + +Y + N+++ + +SV+GYC+LP++IL+ F++ G + +
Sbjct: 153 GISAMGCLGMYCLLNLMSMT--GVSFGCVSSVLGYCLLPMIILSTFAVIFSLQGILGIVL 210
Query: 202 SAVFVLWAARASTNLMVS-LADGGEEHRGLIAYACFLIYTLFSLLVIF 248
+A+ + W + +++ + +S LA G++ L+AY C L+Y +F+L+ +F
Sbjct: 211 AALIIGWCSFSASKIFISALAMDGQQL--LVAYPCALLYGVFALISVF 256
>sp|Q66KA5|YIPF5_XENTR Protein YIPF5 OS=Xenopus tropicalis GN=yipf5 PE=2 SV=1
Length = 256
Score = 124 bits (312), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 67/189 (35%), Positives = 122/189 (64%), Gaps = 8/189 (4%)
Query: 62 PISTSTSAGGSASFDDEEPLLDELGIHPDQIWKKTKSILNPFRV-NPTVHKGSDLSGPIV 120
P +T + G ++FDDE PLL+ELGI+ D IW+KT ++L+P +V + + +DL+GP+V
Sbjct: 74 PAATDSVYG--STFDDEPPLLEELGINFDHIWQKTLTVLHPLKVADGNIMNETDLAGPMV 131
Query: 121 LYLSFGLFQLLAGKLQFGVILGWIVVSSIFLYVVFNMLAGRNGNLDLHTCTSVVGYCMLP 180
L+FG LLAGK+QFG + G + + +Y + N+++ + +SV+GYC+LP
Sbjct: 132 FCLAFGATLLLAGKIQFGYVYGISAIGCLGMYCLLNLMSMT--GVSFGCVSSVLGYCLLP 189
Query: 181 VVILAAFSLFLPQGGAIRFAVSAVFVLWAARASTNLMVS-LADGGEEHRGLIAYACFLIY 239
++IL++F++ G + ++A+ + W + +++ + +S LA G++ L+AY C L+Y
Sbjct: 190 MIILSSFAVIFSLQGILGIVLAALIIGWCSFSASKIFISALAMDGQQV--LVAYPCALLY 247
Query: 240 TLFSLLVIF 248
+F+L+ +F
Sbjct: 248 GVFALISVF 256
>sp|Q4R5M4|YIPF5_MACFA Protein YIPF5 OS=Macaca fascicularis GN=YIPF5 PE=2 SV=1
Length = 257
Score = 123 bits (308), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/225 (32%), Positives = 129/225 (57%), Gaps = 19/225 (8%)
Query: 27 RRVPTAPFQPNRPASSAI--PFMSFDIGSATPASYGGPISTSTSAGGSASFDDEEPLLDE 84
R VP QP +P + I P ++ S P YG SF+DE PLL+E
Sbjct: 49 RFVPPDMMQPQQPYTGQIYQPTQAYTPASPQPF-YGN------------SFEDEPPLLEE 95
Query: 85 LGIHPDQIWKKTKSILNPFRV-NPTVHKGSDLSGPIVLYLSFGLFQLLAGKLQFGVILGW 143
LGI+ D IW+KT ++L+P +V + ++ +DL+GP+V L+FG LLAGK+QFG + G
Sbjct: 96 LGINFDHIWQKTLTVLHPLKVADGSIMNETDLAGPMVFCLAFGATLLLAGKIQFGYVYGI 155
Query: 144 IVVSSIFLYVVFNMLAGRNGNLDLHTCTSVVGYCMLPVVILAAFSLFLPQGGAIRFAVSA 203
+ + ++ + N+++ + SV+GYC+LP+++L++F++ G + ++A
Sbjct: 156 SAIGCLGMFCLLNLMSMT--GVSFGCVASVLGYCLLPMILLSSFAVIFSLQGMVGIILTA 213
Query: 204 VFVLWAARASTNLMVSLADGGEEHRGLIAYACFLIYTLFSLLVIF 248
+ W + +++ + +S A E + L+AY C L+Y +F+L+ +F
Sbjct: 214 GIIGWCSFSASKIFIS-ALAMEGQQLLVAYPCALLYGVFALISVF 257
>sp|Q5R6W5|YIPF5_PONAB Protein YIPF5 OS=Pongo abelii GN=YIPF5 PE=2 SV=1
Length = 257
Score = 121 bits (304), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 129/225 (57%), Gaps = 19/225 (8%)
Query: 27 RRVPTAPFQPNRPASSAI--PFMSFDIGSATPASYGGPISTSTSAGGSASFDDEEPLLDE 84
R VP QP +P + I P ++ S P YG +F+DE PLL+E
Sbjct: 49 RFVPPDMMQPQQPYTGQIYQPTQAYTPASPQPF-YGN------------NFEDEPPLLEE 95
Query: 85 LGIHPDQIWKKTKSILNPFRV-NPTVHKGSDLSGPIVLYLSFGLFQLLAGKLQFGVILGW 143
LGI+ D IW+KT ++L+P +V + ++ +DL+GP+V L+FG LLAGK+QFG + G
Sbjct: 96 LGINFDHIWQKTLTVLHPLKVADGSIMNETDLAGPMVFCLAFGATLLLAGKIQFGYVYGI 155
Query: 144 IVVSSIFLYVVFNMLAGRNGNLDLHTCTSVVGYCMLPVVILAAFSLFLPQGGAIRFAVSA 203
+ + ++ + N+++ + SV+GYC+LP+++L++F++ G + ++A
Sbjct: 156 SAIGCLGMFCLLNLMSMT--GVSFGCVASVLGYCLLPMILLSSFAVIFSLQGMVGIILTA 213
Query: 204 VFVLWAARASTNLMVSLADGGEEHRGLIAYACFLIYTLFSLLVIF 248
+ W + +++ + +S A E + L+AY C L+Y +F+L+ +F
Sbjct: 214 GIIGWCSFSASKIFIS-ALAMEGQQLLVAYPCALLYGVFALISVF 257
>sp|Q969M3|YIPF5_HUMAN Protein YIPF5 OS=Homo sapiens GN=YIPF5 PE=1 SV=1
Length = 257
Score = 121 bits (304), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 129/225 (57%), Gaps = 19/225 (8%)
Query: 27 RRVPTAPFQPNRPASSAI--PFMSFDIGSATPASYGGPISTSTSAGGSASFDDEEPLLDE 84
R VP QP +P + I P ++ S P YG +F+DE PLL+E
Sbjct: 49 RFVPPDMMQPQQPYTGQIYQPTQAYTPASPQPF-YGN------------NFEDEPPLLEE 95
Query: 85 LGIHPDQIWKKTKSILNPFRV-NPTVHKGSDLSGPIVLYLSFGLFQLLAGKLQFGVILGW 143
LGI+ D IW+KT ++L+P +V + ++ +DL+GP+V L+FG LLAGK+QFG + G
Sbjct: 96 LGINFDHIWQKTLTVLHPLKVADGSIMNETDLAGPMVFCLAFGATLLLAGKIQFGYVYGI 155
Query: 144 IVVSSIFLYVVFNMLAGRNGNLDLHTCTSVVGYCMLPVVILAAFSLFLPQGGAIRFAVSA 203
+ + ++ + N+++ + SV+GYC+LP+++L++F++ G + ++A
Sbjct: 156 SAIGCLGMFCLLNLMSMT--GVSFGCVASVLGYCLLPMILLSSFAVIFSLQGMVGIILTA 213
Query: 204 VFVLWAARASTNLMVSLADGGEEHRGLIAYACFLIYTLFSLLVIF 248
+ W + +++ + +S A E + L+AY C L+Y +F+L+ +F
Sbjct: 214 GIIGWCSFSASKIFIS-ALAMEGQQLLVAYPCALLYGVFALISVF 257
>sp|Q5E9E8|YIPF5_BOVIN Protein YIPF5 OS=Bos taurus GN=YIPF5 PE=2 SV=1
Length = 257
Score = 119 bits (297), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 127/223 (56%), Gaps = 15/223 (6%)
Query: 27 RRVPTAPFQPNRPASSAIPFMSFDIGSATPASYGGPISTSTSAGGSASFDDEEPLLDELG 86
R VP QP +P + I + TP + G +F+DE PLL+ELG
Sbjct: 49 RFVPADMMQPQQPYTGQIFQPTQTYTPTTPQPFYGN-----------NFEDEPPLLEELG 97
Query: 87 IHPDQIWKKTKSILNPFRV-NPTVHKGSDLSGPIVLYLSFGLFQLLAGKLQFGVILGWIV 145
I+ D IW+KT ++L+P +V + ++ +DL+GP+V L+FG LLAGK+QFG + G
Sbjct: 98 INFDHIWQKTLTVLHPLKVADGSIMNETDLAGPMVFCLAFGATLLLAGKIQFGYVYGISA 157
Query: 146 VSSIFLYVVFNMLAGRNGNLDLHTCTSVVGYCMLPVVILAAFSLFLPQGGAIRFAVSAVF 205
+ + ++ + N+++ + SV+GYC+LP+++L++F++ G + ++A
Sbjct: 158 IGCLGMFCLLNLMSMT--GVSFGCVASVLGYCLLPMILLSSFAVIFSLQGMVGIILTAGI 215
Query: 206 VLWAARASTNLMVSLADGGEEHRGLIAYACFLIYTLFSLLVIF 248
+ W + +++ + +S A E + L+AY C L+Y +F+L+ +F
Sbjct: 216 IGWCSFSASKIFIS-ALAMEGQQLLVAYPCALLYGVFALISVF 257
>sp|Q6P5I8|YIPF5_DANRE Protein YIPF5 OS=Danio rerio GN=yipf5 PE=2 SV=1
Length = 257
Score = 117 bits (294), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 111/176 (63%), Gaps = 6/176 (3%)
Query: 75 FDDEEPLLDELGIHPDQIWKKTKSILNPFRV-NPTVHKGSDLSGPIVLYLSFGLFQLLAG 133
F+DE PLL+ELGI+ D IW+KT ++L+P + + ++ +DL+GP+V L+FG LL G
Sbjct: 86 FEDEPPLLEELGINFDHIWQKTLTVLHPLKASDGSIMNETDLAGPMVFCLAFGATLLLTG 145
Query: 134 KLQFGVILGWIVVSSIFLYVVFNMLAGRNGNLDLHTCTSVVGYCMLPVVILAAFSLFLPQ 193
K+QFG + G + + +Y + N+++ + SV+GYC+LP++IL++F +
Sbjct: 146 KIQFGYVYGISAIGCLGMYCLLNLMSMT--GVSFGCVASVLGYCLLPMIILSSFGVIFSL 203
Query: 194 GGAIRFAVSAVFVLWAARASTNLMVS-LADGGEEHRGLIAYACFLIYTLFSLLVIF 248
G + ++A + W + +++ + +S LA G++ L+AY C L+Y +F+L+ +F
Sbjct: 204 QGIMGIILTAAIIGWCSLSASKIFISALAMDGQQL--LVAYPCALLYGVFALISVF 257
>sp|Q54QY3|YIPF5_DICDI Protein YIPF5 homolog OS=Dictyostelium discoideum GN=yipf5 PE=3
SV=1
Length = 212
Score = 107 bits (268), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 61/178 (34%), Positives = 110/178 (61%), Gaps = 4/178 (2%)
Query: 72 SASFDDEEPLLDELGIHPDQIWKKTKSILNPFR-VNPTVHKGSDLSGPIVLYLSFGLFQL 130
+ SFD+E PLL+ELGI+ D I KT S+LNP + ++ + +DL GPI+ L G L
Sbjct: 38 TDSFDNELPLLEELGINFDHIRSKTLSVLNPLKKIDSHIMDDTDLGGPILFGLLLGFSLL 97
Query: 131 LAGKLQFGVILGWIVVSSIFLYVVFNMLAGRNGNLDLHTCTSVVGYCMLPVVILAAFSLF 190
++GK+QFG I G ++ + +Y+V N+++ + +D++ SV+GYC+LP++ L+ SL
Sbjct: 98 MSGKIQFGYIYGLGLIGCVSMYIVLNLMSEK--GIDIYRVISVLGYCLLPMIFLSFTSLI 155
Query: 191 LPQGGAIRFAVSAVFVLWAARASTNLMVSLADGGEEHRGLIAYACFLIYTLFSLLVIF 248
+ G + + + ++W+ +++ + V + ++ R L+AY L+YT F+L+ F
Sbjct: 156 ININGMVGYILIGFAIVWSTYSASKMFVKVLSMIDQ-RILVAYPVGLLYTGFALITAF 212
>sp|Q9EQQ2|YIPF5_MOUSE Protein YIPF5 OS=Mus musculus GN=Yipf5 PE=2 SV=1
Length = 257
Score = 101 bits (251), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 103/165 (62%), Gaps = 6/165 (3%)
Query: 86 GIHPDQIWKKTKSILNPFRV-NPTVHKGSDLSGPIVLYLSFGLFQLLAGKLQFGVILGWI 144
GI+ D IW+KT ++L+P R + ++ +DL+GP+V L+FG LLAGK+QFG + G
Sbjct: 97 GINFDHIWQKTLTVLHPLRAADGSIMNETDLAGPVVFCLAFGATLLLAGKIQFGYVYGIS 156
Query: 145 VVSSIFLYVVFNMLAGRNGNLDLHTCTSVVGYCMLPVVILAAFSLFLPQGGAIRFAVSAV 204
+ + ++ + N+++ + SV+GYC+LP+++L++F++ G + ++A
Sbjct: 157 AIGCLGMFCLLNLMSMT--GVSFGCVASVLGYCLLPMILLSSFAVVFSLQGMVGILLTAT 214
Query: 205 FVLWAARASTNLMVS-LADGGEEHRGLIAYACFLIYTLFSLLVIF 248
+ W + +++ + +S LA G++ L+AY C L+Y +F+L+ +F
Sbjct: 215 IIGWCSFSASKIFISALAMDGQQL--LVAYPCALLYGVFALISVF 257
>sp|Q5XID0|YIPF5_RAT Protein YIPF5 OS=Rattus norvegicus GN=Yipf5 PE=2 SV=1
Length = 257
Score = 101 bits (251), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 103/165 (62%), Gaps = 6/165 (3%)
Query: 86 GIHPDQIWKKTKSILNPFRV-NPTVHKGSDLSGPIVLYLSFGLFQLLAGKLQFGVILGWI 144
GI+ D IW+KT ++L+P R + ++ +DL+GP+V L+FG LLAGK+QFG + G
Sbjct: 97 GINFDHIWQKTLTVLHPLRASDGSIMNETDLAGPVVFCLAFGATLLLAGKIQFGYVYGIS 156
Query: 145 VVSSIFLYVVFNMLAGRNGNLDLHTCTSVVGYCMLPVVILAAFSLFLPQGGAIRFAVSAV 204
+ + ++ + N+++ + SV+GYC+LP+++L++F++ G + ++A
Sbjct: 157 AIGCLGMFCLLNLMSMT--GVSFGCVASVLGYCLLPMILLSSFAVVFSLQGMVGILLTAT 214
Query: 205 FVLWAARASTNLMVS-LADGGEEHRGLIAYACFLIYTLFSLLVIF 248
+ W + +++ + +S LA G++ L+AY C L+Y +F+L+ +F
Sbjct: 215 IIGWCSFSASKIFISALAMDGQQL--LVAYPCALLYGVFALISVF 257
>sp|A5D7K7|YIPF7_BOVIN Protein YIPF7 OS=Bos taurus GN=YIPF7 PE=2 SV=1
Length = 255
Score = 100 bits (248), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 98/164 (59%), Gaps = 4/164 (2%)
Query: 86 GIHPDQIWKKTKSILNPFR-VNPTVHKGSDLSGPIVLYLSFGLFQLLAGKLQFGVILGWI 144
GI+ D IW+KT ++LNP + + ++ +DL+GPI+ ++ G LLAGK+QFG + G
Sbjct: 95 GINFDHIWQKTLTVLNPMKPADGSIMNETDLTGPILFCMALGATLLLAGKVQFGYVYGMS 154
Query: 145 VVSSIFLYVVFNMLAGRNGNLDLHTCTSVVGYCMLPVVILAAFSLFLPQGGAIRFAVSAV 204
+ + ++ + N+++ + + SV+GYC+LP+VIL++ ++F G + V
Sbjct: 155 AIGCLGIHALLNLMS--SSGVSYGCVASVLGYCLLPMVILSSCAIFFSLQGTFGTVSALV 212
Query: 205 FVLWAARASTNLMVSLADGGEEHRGLIAYACFLIYTLFSLLVIF 248
+ W + +++ + S A E + LIAY C L+Y LF+L+ +F
Sbjct: 213 IIGWCSLSASKIFTS-ALAMEGQQLLIAYPCALLYGLFALVTVF 255
>sp|P53039|YIP1_YEAST Protein transport protein YIP1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=YIP1 PE=1 SV=1
Length = 248
Score = 93.2 bits (230), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 103/185 (55%), Gaps = 9/185 (4%)
Query: 72 SASFDDEEPLLDELGIHPDQIWKKTKSILNPFR----VNPTVHKGSDLSGPIVLYLSFGL 127
+ + E PLL+E+GI+ D I KTK +L P R V + SDL+GP++ +L FGL
Sbjct: 64 TKGYPHEPPLLEEIGINFDHIITKTKMVLIPIRFGSGVPQEILNDSDLAGPLIFFLLFGL 123
Query: 128 FQLLAGKLQFGVILGWIVVSSIFLYVVFNMLAGRN----GNLDLHTCTSVVGYCMLPVVI 183
F L+AGK+ FG I G + +I L+ + +++ + NL S++GYC LP+
Sbjct: 124 FLLMAGKVHFGYIYGVALFGTISLHNLSKLMSNNDTSTQTNLQFFNTASILGYCFLPLCF 183
Query: 184 LAAFSLFLPQGGAIRFAVSAVFVLWAARASTNLMVSLADGGEEHRGLIAYACFLIYTLFS 243
L+ +F + VS +FV+W+ S+ + SL + R LIAY + Y++F+
Sbjct: 184 LSLLGIFHGLNNTTGYVVSVLFVIWSTWTSSGFLNSLLQ-LQNARLLIAYPLLIFYSVFA 242
Query: 244 LLVIF 248
L+VIF
Sbjct: 243 LMVIF 247
>sp|O94348|YIP1_SCHPO Protein transport protein yip1 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=yip1 PE=3 SV=1
Length = 227
Score = 93.2 bits (230), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 107/207 (51%), Gaps = 9/207 (4%)
Query: 48 SFDIGSATPASYGGPISTSTSAGGSASFDD-----EEPLLDELGIHPDQIWKKTKSILNP 102
SF+ S Y P+ S G A+F E LL+EL I+ I +KT +LNP
Sbjct: 22 SFNTQSRAAGFYDEPLHEPLSQGWLAAFSTSGYPGEPSLLEELEINFGHIKQKTTHVLNP 81
Query: 103 FR-VNPTVHKGSDLSGPIVLYLSFGLFQLLAGKLQFGVILGWIVVSSIFLYVVFNMLAGR 161
F+ V+ + +D++GPI+ L F F L G+ FG I G ++ S+ L+ V +++ +
Sbjct: 82 FKHVDVHIMDDTDMAGPILFCLLFSTFLSLHGRSHFGYIYGIALLGSLSLHFVLRLMSAK 141
Query: 162 NGNLDLHTCTSVVGYCMLPVVILAAFSLFLPQGGAIRFAVSAVFVLWAARASTNLMVSLA 221
NL SV+GY +LP+V++A F G +A++A+ +W A++ + V +
Sbjct: 142 --NLFFTRTVSVLGYSLLPLVVIAFFKNIFTFNGIAGYALAALACIWCTYAASAMFVGIL 199
Query: 222 DGGEEHRGLIAYACFLIYTLFSLLVIF 248
R L+AY L Y +F+++ +F
Sbjct: 200 QVNNM-RFLVAYPIALFYGVFAVITVF 225
>sp|Q5ZJD7|YIPF4_CHICK Protein YIPF4 OS=Gallus gallus GN=YIPF4 PE=2 SV=1
Length = 249
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 80/175 (45%), Gaps = 17/175 (9%)
Query: 76 DDEEPLLDELGIHPDQIWKKTKSILNPFRV----NPTVHKGSDLSGPIVLYLSFGLFQLL 131
+D +PLL+EL I I+ K + +L P V D GP+ + L F + L
Sbjct: 77 EDNKPLLEELDIDLKDIYYKIRCVLMPMPSLGFNRQVVRDNPDFWGPLAVVLFFSMISLY 136
Query: 132 AGKLQFGVILGWIVVSSIFLYVVFNMLAG-RNGNLDLHTCTSVVGYCMLPVVILAAFSLF 190
QF V+ WI+ IF + +LA G + V+GY +LP++++A L
Sbjct: 137 G---QFKVV-SWIITIWIFGSLTIFLLARVLGGEVAYGQVLGVIGYSLLPLIVIAPVLLV 192
Query: 191 LPQGGAIRFAVSAVFVLWAARASTNLMVSLADGGEEHRG---LIAYACFLIYTLF 242
+ + + V WAA ++ +L+V GEE + L+ Y FL+Y F
Sbjct: 193 VGSFEVVSTLIKLFGVFWAAYSAASLLV-----GEEFKTKKPLLIYPIFLLYIYF 242
>sp|Q5M7T4|YIPF4_RAT Protein YIPF4 OS=Rattus norvegicus GN=Yipf4 PE=2 SV=1
Length = 246
Score = 59.3 bits (142), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 80/175 (45%), Gaps = 17/175 (9%)
Query: 76 DDEEPLLDELGIHPDQIWKKTKSILNPFRV----NPTVHKGSDLSGPIVLYLSFGLFQLL 131
+D +PLL+EL I I+ K + +L P V D GP+ + L F + L
Sbjct: 74 EDNKPLLEELDIDLKDIYYKIRCVLMPMPSLGFNRQVVRDNPDFWGPLAVVLFFSMISLY 133
Query: 132 AGKLQFGVILGWIVVSSIFLYVVFNMLAG-RNGNLDLHTCTSVVGYCMLPVVILAAFSLF 190
QF V+ WI+ IF + +LA G + V+GY +LP++++A L
Sbjct: 134 G---QFRVV-SWIITIWIFGSLTIFLLARVLGGEVAYGQVLGVIGYSLLPLIVIAPILLV 189
Query: 191 LPQGGAIRFAVSAVFVLWAARASTNLMVSLADGGEEHRG---LIAYACFLIYTLF 242
+ + + V WAA ++ +L+V GEE + L+ Y FL+Y F
Sbjct: 190 VGSFEMVSTLIKLFGVFWAAYSAASLLV-----GEEFKTKKPLLIYPIFLLYIYF 239
>sp|Q8C407|YIPF4_MOUSE Protein YIPF4 OS=Mus musculus GN=Yipf4 PE=2 SV=1
Length = 246
Score = 59.3 bits (142), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 80/175 (45%), Gaps = 17/175 (9%)
Query: 76 DDEEPLLDELGIHPDQIWKKTKSILNPFRV----NPTVHKGSDLSGPIVLYLSFGLFQLL 131
+D +PLL+EL I I+ K + +L P V D GP+ + L F + L
Sbjct: 74 EDNKPLLEELDIDLKDIYYKIRCVLMPMPSLGFNRQVVRDNPDFWGPLAVVLFFSMISLY 133
Query: 132 AGKLQFGVILGWIVVSSIFLYVVFNMLAG-RNGNLDLHTCTSVVGYCMLPVVILAAFSLF 190
QF V+ WI+ IF + +LA G + V+GY +LP++++A L
Sbjct: 134 G---QFRVV-SWIITIWIFGSLTIFLLARVLGGEVAYGQVLGVIGYSLLPLIVIAPILLV 189
Query: 191 LPQGGAIRFAVSAVFVLWAARASTNLMVSLADGGEEHRG---LIAYACFLIYTLF 242
+ + + V WAA ++ +L+V GEE + L+ Y FL+Y F
Sbjct: 190 VGSFEMVSTLIKLFGVFWAAYSAASLLV-----GEEFKTKKPLLIYPIFLLYIYF 239
>sp|Q9BSR8|YIPF4_HUMAN Protein YIPF4 OS=Homo sapiens GN=YIPF4 PE=1 SV=1
Length = 244
Score = 59.3 bits (142), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 80/175 (45%), Gaps = 17/175 (9%)
Query: 76 DDEEPLLDELGIHPDQIWKKTKSILNPFRV----NPTVHKGSDLSGPIVLYLSFGLFQLL 131
+D +PLL+EL I I+ K + +L P V D GP+ + L F + L
Sbjct: 72 EDNKPLLEELDIDLKDIYYKIRCVLMPMPSLGFNRQVVRDNPDFWGPLAVVLFFSMISLY 131
Query: 132 AGKLQFGVILGWIVVSSIFLYVVFNMLAG-RNGNLDLHTCTSVVGYCMLPVVILAAFSLF 190
QF V+ WI+ IF + +LA G + V+GY +LP++++A L
Sbjct: 132 G---QFRVV-SWIITIWIFGSLTIFLLARVLGGEVAYGQVLGVIGYSLLPLIVIAPVLLV 187
Query: 191 LPQGGAIRFAVSAVFVLWAARASTNLMVSLADGGEEHRG---LIAYACFLIYTLF 242
+ + + V WAA ++ +L+V GEE + L+ Y FL+Y F
Sbjct: 188 VGSFEVVSTLIKLFGVFWAAYSAASLLV-----GEEFKTKKPLLIYPIFLLYIYF 237
>sp|Q6NYF1|YIPF4_DANRE Protein YIPF4 OS=Danio rerio GN=yipf4 PE=2 SV=1
Length = 237
Score = 58.9 bits (141), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 78/171 (45%), Gaps = 11/171 (6%)
Query: 77 DEEPLLDELGIHPDQIWKKTKSILNPFRV----NPTVHKGSDLSGPIVLYLSFGLFQLLA 132
D +PLL+EL I I+ K + +L P V D GP+ + L F + +
Sbjct: 66 DTKPLLEELDIDLKDIYYKIRCVLMPMPSLGFNRQVVRDNPDFWGPLAVVLLFSMISIYG 125
Query: 133 GKLQFGVILGWIVVSSIFLYVVFNMLAG-RNGNLDLHTCTSVVGYCMLPVVILAAFSLFL 191
QF V+ WI+ IF + +LA G + V+GY +LP++++A L +
Sbjct: 126 ---QFRVV-SWIITIWIFGSLTIFLLARVLGGEVSYGQVLGVIGYSLLPLIVIAPLLLVI 181
Query: 192 PQGGAIRFAVSAVFVLWAARASTNLMVSLADGGEEHRGLIAYACFLIYTLF 242
+ + V WAA ++ +L+V D + + L+ Y FL+Y F
Sbjct: 182 GGFEVVSTLIKLFGVFWAAYSAASLLV--GDEFKTKKPLLIYPIFLLYIYF 230
>sp|Q28CH8|YIPF6_XENTR Protein YIPF6 OS=Xenopus tropicalis GN=yipf6 PE=2 SV=1
Length = 233
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 82/198 (41%), Gaps = 30/198 (15%)
Query: 71 GSASFDDEEPLLDELGIHPDQIWKKTKSILNPF------RVNPTVHKGSDLSGPIVLYLS 124
S S +D+ LDE D I + K++ N F + + T+ + DL GP+VL +S
Sbjct: 39 ASTSQEDDLSTLDE--PVKDTIMRDLKAVGNKFLHVMYPKKSTTLLRDWDLWGPLVLCVS 96
Query: 125 FGLFQLLAGKL--------QFGVILGWIVVSSIFLYVVFNMLAGRNGNLDLHTCTSVVGY 176
L L G QF + I ++ + + +L G + V+GY
Sbjct: 97 LAL-MLQGGNADSKDDGGPQFAEVFVIIWFGAVVITLNSKLLGG---TISFFQSLCVLGY 152
Query: 177 CMLPVVI---LAAFSLFLPQGGA---IRFAVSAVFVLWAARASTNLMVSLADGG-EEHRG 229
C+LP+ + + L L A +R V V W+ AST LAD R
Sbjct: 153 CILPLTVAMLVCRLVLLLSHTTASFIVRLVVVTVMFAWSTFASTAF---LADSQPPNRRA 209
Query: 230 LIAYACFLIYTLFSLLVI 247
L Y FL Y + S +V+
Sbjct: 210 LAVYPIFLFYFVISWMVL 227
>sp|A6QLC6|YIPF6_BOVIN Protein YIPF6 OS=Bos taurus GN=YIPF6 PE=2 SV=1
Length = 236
Score = 41.2 bits (95), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 77/169 (45%), Gaps = 23/169 (13%)
Query: 94 KKTKSILNPFRVNPTVHKGSDLSGPIVLYLSFGLFQLLAGKL--------QFGVILGWIV 145
KK +L P + N T+ + DL GP++L ++ L L G + QF + +
Sbjct: 71 KKFMHVLYPRKSN-TLLRDWDLWGPLILCVTLALM-LQRGSVDSEKDGGPQFAEVFVIVW 128
Query: 146 VSSIFLYVVFNMLAGRNGNLDLHTCTSVVGYCMLPVV--ILAAFSLFLPQGGAIRFAVSA 203
++ + + +L G N+ V+GYC+LP+ +L + L + G + F V
Sbjct: 129 FGAVTITLNSKLLGG---NISFFQSLCVLGYCILPLTMAMLVCRLVLLAEPGPVNFMVRL 185
Query: 204 VFVL----WAARASTNLMVSLADGGEEHRGLIA-YACFLIYTLFSLLVI 247
V+ W+ AST LAD +R +A Y FL Y + S +++
Sbjct: 186 FVVIIMFAWSIVASTAF---LADSQPPNRKALAVYPVFLFYFVISWMIL 231
>sp|Q96EC8|YIPF6_HUMAN Protein YIPF6 OS=Homo sapiens GN=YIPF6 PE=2 SV=2
Length = 236
Score = 41.2 bits (95), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 72/168 (42%), Gaps = 21/168 (12%)
Query: 94 KKTKSILNPFRVNPTVHKGSDLSGPIVLYLSFGLF-------QLLAGKLQFGVILGWIVV 146
KK +L P + N T+ + DL GP++L ++ L G QF + +
Sbjct: 71 KKFMHVLYPRKSN-TLLRDWDLWGPLILCVTLALMLQRDSADSEKDGGPQFAEVFVIVWF 129
Query: 147 SSIFLYVVFNMLAGRNGNLDLHTCTSVVGYCMLP--VVILAAFSLFLPQGGAIRFAVSAV 204
++ + + +L G N+ V+GYC+LP V +L + L G + F V
Sbjct: 130 GAVTITLNSKLLGG---NISFFQSLCVLGYCILPLTVAMLICRLVLLADPGPVNFMVRLF 186
Query: 205 FVL----WAARASTNLMVSLADGG-EEHRGLIAYACFLIYTLFSLLVI 247
V+ W+ AST LAD R L Y FL Y + S +++
Sbjct: 187 VVIVMFAWSIVASTAF---LADSQPPNRRALAVYPVFLFYFVISWMIL 231
>sp|Q4QQU5|YIPF6_RAT Protein YIPF6 OS=Rattus norvegicus GN=Yipf6 PE=2 SV=1
Length = 236
Score = 41.2 bits (95), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 75/169 (44%), Gaps = 22/169 (13%)
Query: 94 KKTKSILNPFRVNPTVHKGSDLSGPIVLYLSFGLF--------QLLAGKLQFGVILGWIV 145
+K +L P + N T+ + DL GP++L +S L + G +F + I
Sbjct: 71 RKFMHVLYPRKSN-TLLRDWDLWGPLILCVSLALMLQKSSVEGKRDGGSPEFAEVFVIIW 129
Query: 146 VSSIFLYVVFNMLAGRNGNLDLHTCTSVVGYCMLP--VVILAAFSLFLPQGGAIRFAVSA 203
++ + + +L G N+ V+GYC+LP + +L L L G I F +
Sbjct: 130 FGAVTITLNSKLLGG---NISFFQSLCVLGYCVLPLNIAMLICRLLLLAGQGPINFMIRL 186
Query: 204 VFVL----WAARASTNLMVSLADGGEEHRGLIA-YACFLIYTLFSLLVI 247
VL W+ AST LAD +R +A Y FL Y + S +++
Sbjct: 187 FVVLVMFAWSVIASTAF---LADCQPPNRKALAVYPVFLFYFVVSWMIL 232
>sp|Q6IQ85|YIPF6_DANRE Protein YIPF6 OS=Danio rerio GN=yipf6 PE=2 SV=1
Length = 240
Score = 38.9 bits (89), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 80/184 (43%), Gaps = 21/184 (11%)
Query: 78 EEPLLDELGIHPDQIWKKTKSILNPFRVNPTVHKGSDLSGPIVLYLSFGLF-------QL 130
+EP+ D + + +K ++ P + + + + DL GP++L ++ L
Sbjct: 58 DEPVKDTILRDLRAVGQKFVHVMYP-KKSSALLRDWDLWGPLLLCVTLALMLQGGSADSE 116
Query: 131 LAGKLQFGVILGWIVVSSIFLYVVFNMLAGRNGNLDLHTCTSVVGYCMLP--VVILAAFS 188
G+ QF + I S+ + + +L G + V+GYC+LP V ++
Sbjct: 117 EDGRPQFAEVFVIIWFGSVIITLNSKLLGG---TISFFQSLCVLGYCILPLTVAMIVCRI 173
Query: 189 LFLPQGGAIRFAVSAVFVL----WAARASTNLMVSLADGGEEHR-GLIAYACFLIYTLFS 243
+ L G + FAV + V W+ AST LAD +R L+ Y FL Y +
Sbjct: 174 VLLGGSGVVSFAVRLIVVTASFSWSTFASTAF---LADSQPTNRKALVVYPVFLFYFVIG 230
Query: 244 LLVI 247
+++
Sbjct: 231 WMIL 234
>sp|Q8BR70|YIPF6_MOUSE Protein YIPF6 OS=Mus musculus GN=Yipf6 PE=2 SV=1
Length = 236
Score = 38.1 bits (87), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 74/169 (43%), Gaps = 22/169 (13%)
Query: 94 KKTKSILNPFRVNPTVHKGSDLSGPIVLYLSFGLFQLLA--------GKLQFGVILGWIV 145
+K +L P + N + + DL GP++L ++ L + G +F + I
Sbjct: 71 RKFMHVLYPRKSNALL-RDWDLWGPLILCVTLALMLQKSSIDGKNDGGGPEFAEVFVIIW 129
Query: 146 VSSIFLYVVFNMLAGRNGNLDLHTCTSVVGYCMLP--VVILAAFSLFLPQGGAIRFAVSA 203
++ + + +L G N+ V+GYC+LP + +L L L G I F +
Sbjct: 130 FGAVTITLNSKLLGG---NISFFQSLCVLGYCILPLNIAMLICRLLLLAGQGPINFMIRL 186
Query: 204 VFVL----WAARASTNLMVSLADGGEEHRGLIA-YACFLIYTLFSLLVI 247
VL W+ AST LAD +R +A Y FL Y + S +++
Sbjct: 187 FVVLLMFAWSVVASTAF---LADSQPPNRKALAVYPVFLFYFVISWMIL 232
>sp|Q09904|NU124_SCHPO Nucleoporin nup124 OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=nup124 PE=1 SV=1
Length = 1159
Score = 33.1 bits (74), Expect = 1.8, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
Query: 11 VFPSGGNPTTAGNINQRRVPTA--PFQPNRPASSAIPFMSFDIGSATPASYGGPISTSTS 68
+F +G P +G+IN A +P+ PAS+ P F G+ATP+++ S S +
Sbjct: 1069 MFGAGNTPNPSGSINNASQAFAFGSGEPSNPASNP-PSTGFSFGAATPSAFNASASQSPA 1127
Query: 69 AGG 71
G
Sbjct: 1128 PNG 1130
>sp|P36003|NNK1_YEAST Nitrogen network kinase 1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=NNK1 PE=1 SV=1
Length = 928
Score = 32.0 bits (71), Expect = 4.5, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 27/59 (45%)
Query: 20 TAGNINQRRVPTAPFQPNRPASSAIPFMSFDIGSATPASYGGPISTSTSAGGSASFDDE 78
T N N V T P Q +R S A F+S S T + S SAGGSA DD+
Sbjct: 384 TPNNSNDTYVNTRPLQRSRHGSIASQFLSSFSPSMTSIAKMNSNPLSGSAGGSARPDDK 442
>sp|Q0MVN8|QOR_PIG Quinone oxidoreductase OS=Sus scrofa GN=CRYZ PE=2 SV=1
Length = 329
Score = 31.6 bits (70), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Query: 102 PFRVNP--TVHKGSDLSGPIVLYLSFGLFQLLAGKLQFGVILGWI 144
P +NP T+ KGS + G + + FQ LA LQ G+ +GW+
Sbjct: 251 PIEINPRDTMTKGSSIKGVALYSSTKEEFQQLAAALQAGMEVGWL 295
>sp|Q8XJ28|SYD_CLOPE Aspartate--tRNA ligase OS=Clostridium perfringens (strain 13 / Type
A) GN=aspS PE=3 SV=1
Length = 597
Score = 31.6 bits (70), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 27/122 (22%), Positives = 48/122 (39%), Gaps = 16/122 (13%)
Query: 39 PASSAIPFMSFDIGSATPASYGGPISTSTSAGGSASFDD---EEPLLDELGIHPDQIWKK 95
P I ++ D G +Y ++ GGS D +E + + LG + W++
Sbjct: 460 PMDEDIKYLDTDPGRVRAKAYDLVLNGEELGGGSIRIHDTKLQEKMFEVLGFTQESAWER 519
Query: 96 TKSILNPFRVNPTVHKGSDLSGPIVLYLSFGLFQL---LAGKLQFGVILGWIVVSSIFLY 152
+L F+ P H G L+FGL ++ LAG ++ + + F Y
Sbjct: 520 FGFLLEAFKFGPPPHGG----------LAFGLDRMIMFLAGTENIKDVITFPKNQNAFCY 569
Query: 153 VV 154
+
Sbjct: 570 LT 571
>sp|Q0TP28|SYD_CLOP1 Aspartate--tRNA ligase OS=Clostridium perfringens (strain ATCC
13124 / NCTC 8237 / Type A) GN=aspS PE=3 SV=1
Length = 597
Score = 31.6 bits (70), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 27/122 (22%), Positives = 48/122 (39%), Gaps = 16/122 (13%)
Query: 39 PASSAIPFMSFDIGSATPASYGGPISTSTSAGGSASFDD---EEPLLDELGIHPDQIWKK 95
P I ++ D G +Y ++ GGS D +E + + LG + W++
Sbjct: 460 PMDEDIKYLDTDPGRVRAKAYDLVLNGEELGGGSIRIHDTKLQEKMFEVLGFTQESAWER 519
Query: 96 TKSILNPFRVNPTVHKGSDLSGPIVLYLSFGLFQL---LAGKLQFGVILGWIVVSSIFLY 152
+L F+ P H G L+FGL ++ LAG ++ + + F Y
Sbjct: 520 FGFLLEAFKFGPPPHGG----------LAFGLDRMIMFLAGTENIKDVITFPKNQNAFCY 569
Query: 153 VV 154
+
Sbjct: 570 LT 571
>sp|Q0SRP8|SYD_CLOPS Aspartate--tRNA ligase OS=Clostridium perfringens (strain SM101 /
Type A) GN=aspS PE=3 SV=1
Length = 597
Score = 31.6 bits (70), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 27/122 (22%), Positives = 48/122 (39%), Gaps = 16/122 (13%)
Query: 39 PASSAIPFMSFDIGSATPASYGGPISTSTSAGGSASFDD---EEPLLDELGIHPDQIWKK 95
P I ++ D G +Y ++ GGS D +E + + LG + W++
Sbjct: 460 PMDEDIKYLDTDPGRVRAKAYDLVLNGEELGGGSIRIHDTKLQEKMFEVLGFTQESAWER 519
Query: 96 TKSILNPFRVNPTVHKGSDLSGPIVLYLSFGLFQL---LAGKLQFGVILGWIVVSSIFLY 152
+L F+ P H G L+FGL ++ LAG ++ + + F Y
Sbjct: 520 FGFLLEAFKFGPPPHGG----------LAFGLDRMIMFLAGTENIKDVITFPKNQNAFCY 569
Query: 153 VV 154
+
Sbjct: 570 LT 571
>sp|Q892B2|SYD_CLOTE Aspartate--tRNA ligase OS=Clostridium tetani (strain Massachusetts
/ E88) GN=aspS PE=3 SV=1
Length = 592
Score = 31.2 bits (69), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 32/77 (41%), Gaps = 3/77 (3%)
Query: 39 PASSAIPFMSFDIGSATPASYGGPISTSTSAGGSASFDD---EEPLLDELGIHPDQIWKK 95
P I ++ D G +Y ++ GGS D +E + + LG ++ W++
Sbjct: 461 PMDEDIQYLDTDPGKVRAKAYDIVLNGEELGGGSIRIHDTKLQEKMFEVLGFTEEKAWER 520
Query: 96 TKSILNPFRVNPTVHKG 112
+L F+ P H G
Sbjct: 521 FGFLLEAFKFGPPPHGG 537
>sp|Q06836|SYT1_YEAST Arf guanine nucleotide exchange factor SYT1 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=SYT1 PE=1
SV=1
Length = 1226
Score = 31.2 bits (69), Expect = 6.6, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 15/59 (25%)
Query: 1 MTKEFSVPPVVFP-------SGGNPTTA--------GNINQRRVPTAPFQPNRPASSAI 44
+ KE S+ P+ +P SG P+TA G IN + TA NRPAS++I
Sbjct: 671 IPKEASLSPIFYPLTNSISASGIAPSTAASCPPSTSGTINGANLGTANSNSNRPASNSI 729
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.140 0.427
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 96,787,162
Number of Sequences: 539616
Number of extensions: 4061812
Number of successful extensions: 10439
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 34
Number of HSP's that attempted gapping in prelim test: 10360
Number of HSP's gapped (non-prelim): 61
length of query: 248
length of database: 191,569,459
effective HSP length: 114
effective length of query: 134
effective length of database: 130,053,235
effective search space: 17427133490
effective search space used: 17427133490
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 60 (27.7 bits)