Query 025760
Match_columns 248
No_of_seqs 137 out of 396
Neff 5.3
Searched_HMMs 13730
Date Mon Mar 25 17:01:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025760.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/025760hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1rzhh2 f.23.10.1 (H:11-35) Ph 32.5 8.5 0.00062 21.1 1.2 17 231-247 3-19 (26)
2 d1p9ga_ g.3.1.1 (A:) Antifunga 9.9 37 0.0027 19.9 0.5 9 169-177 15-23 (41)
3 d1r9ja3 c.48.1.1 (A:527-669) T 8.4 42 0.0031 24.8 0.4 25 80-104 107-131 (143)
4 d1itza3 c.48.1.1 (A:540-675) T 7.9 64 0.0047 23.0 1.3 22 77-98 114-135 (136)
5 d1ntha_ c.1.25.1 (A:) Monometh 7.6 27 0.002 30.3 -1.2 36 66-101 215-251 (457)
6 d2r8oa3 c.48.1.1 (A:528-663) T 7.5 53 0.0039 23.3 0.6 22 79-100 115-136 (136)
7 d1gpua3 c.48.1.1 (A:535-680) T 6.3 60 0.0043 23.9 0.3 26 79-104 109-134 (146)
8 d1v54e_ a.118.11.1 (E:) Cytoch 6.1 48 0.0035 23.8 -0.3 12 79-90 86-97 (105)
9 d2nsfa2 d.106.1.2 (A:161-240) 5.3 54 0.0039 22.4 -0.5 18 79-96 3-20 (80)
10 d1kl9a1 a.60.14.1 (A:89-182) E 5.0 1E+02 0.0074 21.5 0.9 20 78-98 70-89 (94)
No 1
>d1rzhh2 f.23.10.1 (H:11-35) Photosystem II reaction centre subunit H, transmembrane region {Rhodobacter sphaeroides [TaxId: 1063]}
Probab=32.54 E-value=8.5 Score=21.06 Aligned_cols=17 Identities=12% Similarity=0.319 Sum_probs=12.6
Q ss_pred hhhhHHHHHHHHHHhhc
Q 025760 231 IAYACFLIYTLFSLLVI 247 (248)
Q Consensus 231 i~YPi~L~Y~~fa~l~i 247 (248)
+--.+.+|+.+|++|+.
T Consensus 3 aslaiw~fw~ffalli~ 19 (26)
T d1rzhh2 3 ASLAIYSFWIFLAGLIY 19 (26)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 34567788888888874
No 2
>d1p9ga_ g.3.1.1 (A:) Antifungal peptide 2 {Hardy rubber tree (Eucommia ulmoides) [TaxId: 4392]}
Probab=9.92 E-value=37 Score=19.90 Aligned_cols=9 Identities=56% Similarity=1.471 Sum_probs=7.2
Q ss_pred eeeeecccc
Q 025760 169 TCTSVVGYC 177 (248)
Q Consensus 169 q~~siLGYc 177 (248)
-+.|+.|||
T Consensus 15 lccsiygyc 23 (41)
T d1p9ga_ 15 LCCSIYGYC 23 (41)
T ss_dssp CEEETTSCE
T ss_pred eeEEEeeee
Confidence 478888887
No 3
>d1r9ja3 c.48.1.1 (A:527-669) Transketolase (TK), C-domain {Leishmania mexicana mexicana [TaxId: 44270]}
Probab=8.44 E-value=42 Score=24.84 Aligned_cols=25 Identities=16% Similarity=0.421 Sum_probs=21.8
Q ss_pred cchhhhccCHHHHHhcccceecccc
Q 025760 80 PLLDELGIHPDQIWKKTKSILNPFR 104 (248)
Q Consensus 80 PLleeLgiD~~~I~~Kl~~VL~P~~ 104 (248)
-|++++|.|.++|.+|.+.+|.=.+
T Consensus 107 ~L~~~fGlt~e~Iv~~~~~ll~k~~ 131 (143)
T d1r9ja3 107 VLYKKFGITVEEVVRTGRELAKRFP 131 (143)
T ss_dssp HHHHHTTCSHHHHHHHHHHHHHHSC
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHcC
Confidence 4999999999999999999986433
No 4
>d1itza3 c.48.1.1 (A:540-675) Transketolase (TK), C-domain {Maize (Zea mays) [TaxId: 4577]}
Probab=7.92 E-value=64 Score=22.99 Aligned_cols=22 Identities=27% Similarity=0.369 Sum_probs=18.6
Q ss_pred CCCcchhhhccCHHHHHhcccc
Q 025760 77 DEEPLLDELGIHPDQIWKKTKS 98 (248)
Q Consensus 77 ~DePLleeLgiD~~~I~~Kl~~ 98 (248)
.-+-|+|++|+|.++|.+|.+.
T Consensus 114 ~~~~L~~~fglt~~~Iv~~~ks 135 (136)
T d1itza3 114 PAGTIYKEYGITVESIIAAAKS 135 (136)
T ss_dssp CHHHHHHHHTCSHHHHHHHHTT
T ss_pred CHHHHHHHhCCCHHHHHHHHHc
Confidence 4456999999999999998864
No 5
>d1ntha_ c.1.25.1 (A:) Monomethylamine methyltransferase MtmB {Archaeon Methanosarcina barkeri [TaxId: 2208]}
Probab=7.57 E-value=27 Score=30.35 Aligned_cols=36 Identities=28% Similarity=0.263 Sum_probs=26.1
Q ss_pred CCCCCC-CCCCCCCCcchhhhccCHHHHHhcccceec
Q 025760 66 STSAGG-SASFDDEEPLLDELGIHPDQIWKKTKSILN 101 (248)
Q Consensus 66 ~~~~g~-~~~~~~DePLleeLgiD~~~I~~Kl~~VL~ 101 (248)
+-+.|+ +.++..|-|.|.||+||..++----.+|.+
T Consensus 215 a~~~g~~~~~Dsh~vsqLNELKiD~gal~~~a~Yvg~ 251 (457)
T d1ntha_ 215 ADCTGGMTCTDSHEVSQLNELKIDLDAISVIAHYKGN 251 (457)
T ss_dssp TBCTTSBCTTSEEEEECBTTTEECHHHHHHHHHHHHT
T ss_pred hhhcCCcCccchhhhhHHhhhhcchhheehhhhhhcc
Confidence 444454 566678899999999999999854445544
No 6
>d2r8oa3 c.48.1.1 (A:528-663) Transketolase (TK), C-domain {Escherichia coli [TaxId: 562]}
Probab=7.45 E-value=53 Score=23.34 Aligned_cols=22 Identities=36% Similarity=0.616 Sum_probs=18.7
Q ss_pred CcchhhhccCHHHHHhccccee
Q 025760 79 EPLLDELGIHPDQIWKKTKSIL 100 (248)
Q Consensus 79 ePLleeLgiD~~~I~~Kl~~VL 100 (248)
+-|++.+|+|.+.|.++.+..|
T Consensus 115 ~~L~~~~Gl~~~~I~~~i~~~L 136 (136)
T d2r8oa3 115 ELLFEEFGFTVDNVVAKAKELL 136 (136)
T ss_dssp HHHHHHTTCSHHHHHHHHHHHC
T ss_pred HHHHHHcCCCHHHHHHHHHhhC
Confidence 3499999999999999987654
No 7
>d1gpua3 c.48.1.1 (A:535-680) Transketolase (TK), C-domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=6.33 E-value=60 Score=23.94 Aligned_cols=26 Identities=8% Similarity=0.379 Sum_probs=22.3
Q ss_pred CcchhhhccCHHHHHhcccceecccc
Q 025760 79 EPLLDELGIHPDQIWKKTKSILNPFR 104 (248)
Q Consensus 79 ePLleeLgiD~~~I~~Kl~~VL~P~~ 104 (248)
+-|++.+|+|.++|.+|.+.+|.-.+
T Consensus 109 ~~L~~~fGlt~~~I~~~v~~~L~~~k 134 (146)
T d1gpua3 109 PEVFKFFGFTPEGVAERAQKTIAFYK 134 (146)
T ss_dssp HHHHHHTTCSHHHHHHHHHHHHHHHT
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHhc
Confidence 35999999999999999999996443
No 8
>d1v54e_ a.118.11.1 (E:) Cytochrome c oxidase subunit E {Cow (Bos taurus) [TaxId: 9913]}
Probab=6.12 E-value=48 Score=23.80 Aligned_cols=12 Identities=50% Similarity=0.841 Sum_probs=9.3
Q ss_pred CcchhhhccCHH
Q 025760 79 EPLLDELGIHPD 90 (248)
Q Consensus 79 ePLleeLgiD~~ 90 (248)
.|.++||||+..
T Consensus 86 kptl~ELGI~t~ 97 (105)
T d1v54e_ 86 RPTLNELGISTP 97 (105)
T ss_dssp HHHHHHHTCCCT
T ss_pred hhHHHHhCCCCH
Confidence 588889998753
No 9
>d2nsfa2 d.106.1.2 (A:161-240) Micothiol-dependent maleylpyruvate isomerase {Corynebacterium glutamicum [TaxId: 1718]}
Probab=5.28 E-value=54 Score=22.36 Aligned_cols=18 Identities=28% Similarity=0.458 Sum_probs=16.1
Q ss_pred CcchhhhccCHHHHHhcc
Q 025760 79 EPLLDELGIHPDQIWKKT 96 (248)
Q Consensus 79 ePLleeLgiD~~~I~~Kl 96 (248)
+++||+|-.|....|+|=
T Consensus 3 ~~vL~~LladIt~~W~~r 20 (80)
T d2nsfa2 3 EVILRTLAAEITQKWTSQ 20 (80)
T ss_dssp HHHHHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHHHhhc
Confidence 689999999999999874
No 10
>d1kl9a1 a.60.14.1 (A:89-182) Eukaryotic initiation factor 2alpha, eIF2alpha, domain 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=4.98 E-value=1e+02 Score=21.48 Aligned_cols=20 Identities=15% Similarity=0.313 Sum_probs=0.0
Q ss_pred CCcchhhhccCHHHHHhcccc
Q 025760 78 EEPLLDELGIHPDQIWKKTKS 98 (248)
Q Consensus 78 DePLleeLgiD~~~I~~Kl~~ 98 (248)
||.+|++|++| .++.+.++.
T Consensus 70 dp~il~~l~l~-~~vk~~L~~ 89 (94)
T d1kl9a1 70 DPSILDSLDLN-EDEREVLIN 89 (94)
T ss_dssp CGGGGTTSSCC-HHHHHHHHH
T ss_pred CccccccCCCC-HHHHHHHHH
Done!