BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>025767
MILTKQYRCVHSASCQCTKGHLSEDVIFLVFQHMNWNPKTIAALSCTCKWFDDLAKRVLW
KEFCRTRAPKMMVDLQSSGSHSVDGNWRALGKLLIYCSGCKKGGLFNSIQIPGHFVNKTR
FSRTSGKSFLLPQCRTDVLYVSDPCEHLDQGEEGDVGFFRGVFKSFQMSKVRKMLIKRGA
QLHPTEACPYCKAKLWSMLQAKMIPQSASCRLGAYEDCIEYYVCLNGHMLGICSLLPLSD
SEEVSEPE

High Scoring Gene Products

Symbol, full name Information P value
EDL2
AT5G39360
protein from Arabidopsis thaliana 6.2e-117
EDL1
AT5G15440
protein from Arabidopsis thaliana 8.7e-111
EDL3
EID1-like 3
protein from Arabidopsis thaliana 2.8e-50
EID1
EMPFINDLICHER IM DUNKELROTEN LICHT 1
protein from Arabidopsis thaliana 1.6e-11

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  025767
        (248 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2175668 - symbol:EDL2 "AT5G39360" species:3702...  1152  6.2e-117  1
TAIR|locus:2180907 - symbol:EDL1 "AT5G15440" species:3702...  1094  8.7e-111  1
TAIR|locus:2099227 - symbol:EDL3 "EID1-like 3" species:37...   523  2.8e-50   1
TAIR|locus:2133259 - symbol:EID1 "EMPFINDLICHER IM DUNKEL...   118  1.6e-11   2


>TAIR|locus:2175668 [details] [associations]
            symbol:EDL2 "AT5G39360" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] PROSITE:PS50181 EMBL:CP002688
            GenomeReviews:BA000015_GR EMBL:AB009054 HOGENOM:HOG000238370
            ProtClustDB:CLSN2687319 EMBL:AY075673 EMBL:AY133632 IPI:IPI00517595
            RefSeq:NP_198752.1 UniGene:At.43637 ProteinModelPortal:Q9FLZ8
            PaxDb:Q9FLZ8 EnsemblPlants:AT5G39360.1 GeneID:833932
            KEGG:ath:AT5G39360 TAIR:At5g39360 eggNOG:NOG297604
            InParanoid:Q9FLZ8 OMA:EDSIEYY PhylomeDB:Q9FLZ8
            Genevestigator:Q9FLZ8 Uniprot:Q9FLZ8
        Length = 249

 Score = 1152 (410.6 bits), Expect = 6.2e-117, P = 6.2e-117
 Identities = 203/247 (82%), Positives = 224/247 (90%)

Query:     1 MILTKQYRCVHSASCQCTKGHLSEDVIFLVFQHMNWNPKTIAALSCTCKWFDDLAKRVLW 60
             MI+ KQYRC+HSA+C CTKGHLSE+V+FL+ QH+NWNP  IA LSC CKWFDDLAKR+LW
Sbjct:     1 MIIAKQYRCIHSATCHCTKGHLSEEVLFLMVQHLNWNPNVIATLSCVCKWFDDLAKRLLW 60

Query:    61 KEFCRTRAPKMMVDLQSSGSHSVDGNWRALGKLLIYCSGCKKGGLFNSIQIPGHFVNKTR 120
             KEFCR RAPKMM DLQSSGSHSVDG+WRALGKLLIYCSG  KGGLFN +QI GHFV++TR
Sbjct:    61 KEFCRARAPKMMSDLQSSGSHSVDGSWRALGKLLIYCSGSSKGGLFNDVQISGHFVHRTR 120

Query:   121 FSRTSGKSFLLPQCRTD-VLYVSDPCEHLDQGEEGDVGFFRGVFKSFQMSKVRKMLIKRG 179
             FSRTSG+SFL PQCRTD +LYVSDPCEHLDQGE+GD+GFFRG+FKSF MSKVRK+LIK+G
Sbjct:   121 FSRTSGRSFLPPQCRTDDILYVSDPCEHLDQGEDGDLGFFRGIFKSFSMSKVRKLLIKKG 180

Query:   180 AQLHPTEACPYCKAKLWSMLQAKMIPQSASCRLGAYEDCIEYYVCLNGHMLGICSLLPLS 239
                HPTE CPYCKAKLWSMLQAKMIPQSASCRLGAYED IEYYVCLNGHMLG+C+LLPLS
Sbjct:   181 TPFHPTEVCPYCKAKLWSMLQAKMIPQSASCRLGAYEDSIEYYVCLNGHMLGVCTLLPLS 240

Query:   240 DSEEVSE 246
             DSE  SE
Sbjct:   241 DSEGASE 247


>TAIR|locus:2180907 [details] [associations]
            symbol:EDL1 "AT5G15440" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] PROSITE:PS50181 EMBL:CP002688
            GenomeReviews:BA000015_GR EMBL:AL391143 UniGene:At.49023
            UniGene:At.66737 EMBL:BT014972 EMBL:AK226950 IPI:IPI00531943
            PIR:T51522 RefSeq:NP_197048.1 ProteinModelPortal:Q9LF38 SMR:Q9LF38
            EnsemblPlants:AT5G15440.1 GeneID:831397 KEGG:ath:AT5G15440
            TAIR:At5g15440 eggNOG:NOG275348 HOGENOM:HOG000238370
            InParanoid:Q9LF38 OMA:SASCVCI PhylomeDB:Q9LF38
            ProtClustDB:CLSN2687319 Genevestigator:Q9LF38 Uniprot:Q9LF38
        Length = 293

 Score = 1094 (390.2 bits), Expect = 8.7e-111, P = 8.7e-111
 Identities = 193/249 (77%), Positives = 215/249 (86%)

Query:     1 MILTKQYRCVHSASCQCTKGHLSEDVIFLVFQHMNWNPKTIAALSCTCKWFDDLAKRVLW 60
             MIL KQY C HS SCQCTKGHL+EDV+ LVFQH+NWNPK +A LSC C+WFDD AKRVLW
Sbjct:     1 MILPKQYCCTHSPSCQCTKGHLNEDVLLLVFQHLNWNPKLVATLSCVCRWFDDFAKRVLW 60

Query:    61 KEFCRTRAPKMMVDLQSSGSHSVDGNWRALGKLLIYCSGCKKGGLFNS-IQIPGHFVNKT 119
             KEFC+TRAPKMM+DLQSSGSH +DGNWRALGKLLIYCSGC +GGLFNS +QIPGHFV +T
Sbjct:    61 KEFCKTRAPKMMLDLQSSGSHCIDGNWRALGKLLIYCSGCTQGGLFNSSVQIPGHFVYRT 120

Query:   120 RFSRTSGKSFLLPQCRTDVLYVSDPCEHLDQGEEGDVGFFRGVFKSFQMSKVRKMLIKRG 179
             RFSRT G+S L PQCRTDVLYV DPCEHLDQGEEGDVG FRG+FKSF  SKVRK++I + 
Sbjct:   121 RFSRTLGRSLLPPQCRTDVLYVCDPCEHLDQGEEGDVGLFRGIFKSFPTSKVRKVIINKA 180

Query:   180 AQLHPTEACPYCKAKLWSMLQAKMIPQSASCRLGAYEDCIEYYVCLNGHMLGICSLLPLS 239
                HP+E CPYCKAKLWSMLQAK+IPQSA  RL AYEDCIEY+VCLNGH+LGIC+L PLS
Sbjct:   181 VPFHPSEVCPYCKAKLWSMLQAKIIPQSACIRLEAYEDCIEYFVCLNGHLLGICTLAPLS 240

Query:   240 DSEEVSEPE 248
             DSE+    E
Sbjct:   241 DSEDAIPSE 249


>TAIR|locus:2099227 [details] [associations]
            symbol:EDL3 "EID1-like 3" species:3702 "Arabidopsis
            thaliana" [GO:0005634 "nucleus" evidence=IDA] [GO:0006970 "response
            to osmotic stress" evidence=IMP] [GO:0009414 "response to water
            deprivation" evidence=IMP] [GO:0009651 "response to salt stress"
            evidence=IMP] [GO:0009737 "response to abscisic acid stimulus"
            evidence=IMP] [GO:0009738 "abscisic acid mediated signaling
            pathway" evidence=IMP] [GO:0010029 "regulation of seed germination"
            evidence=IMP] [GO:0010228 "vegetative to reproductive phase
            transition of meristem" evidence=IMP] [GO:0006457 "protein folding"
            evidence=RCA] [GO:0009408 "response to heat" evidence=RCA]
            [GO:0009644 "response to high light intensity" evidence=RCA]
            [GO:0042542 "response to hydrogen peroxide" evidence=RCA]
            PROSITE:PS50181 EMBL:CP002686 GenomeReviews:BA000014_GR
            GO:GO:0009738 GO:GO:0009651 GO:GO:0009414 GO:GO:0010228
            GO:GO:0010029 EMBL:AL163816 HOGENOM:HOG000238370
            ProtClustDB:CLSN2687319 EMBL:AY056271 EMBL:BT020425 IPI:IPI00537861
            PIR:T48095 RefSeq:NP_567137.1 UniGene:At.26342
            ProteinModelPortal:Q93ZT5 SMR:Q93ZT5 IntAct:Q93ZT5
            EnsemblPlants:AT3G63060.1 GeneID:825481 KEGG:ath:AT3G63060
            TAIR:At3g63060 eggNOG:NOG299849 InParanoid:Q93ZT5 OMA:GNCWLAR
            PhylomeDB:Q93ZT5 Genevestigator:Q93ZT5 Uniprot:Q93ZT5
        Length = 272

 Score = 523 (189.2 bits), Expect = 2.8e-50, P = 2.8e-50
 Identities = 97/223 (43%), Positives = 142/223 (63%)

Query:    23 SEDVIFLVFQHMNWNPKTIAALSCTCKWFDDLAKRVLWKEFCRTRAPKMMVDLQSSG-SH 81
             +E V+ LVF+ ++W+  T+  ++   + F  +A+R+LW+  C  RAP M+  L     S 
Sbjct:    36 NERVLVLVFESISWDIHTLCTIASLSRRFCAIARRILWRRLCVNRAPGMVAALSGEDPSG 95

Query:    82 SVDGNWRALGKLLIYCSGCKKGGLFNSIQ-IPGHFVNKTRFSRTSGKSFLLPQCRTDVLY 140
              +DG W AL KL+ +C G +    FN  Q   GHF  ++RFS+TSG+ FL   CR D+LY
Sbjct:    96 RIDGGWHALAKLMFFCGGGESTRYFNLSQPTSGHFACESRFSKTSGRFFLPKNCRRDLLY 155

Query:   141 VSDPCEHLDQGEEGDVGFFRGVFKSFQMSKVRKMLIKRGAQLHPTEACPYCKAKLWSMLQ 200
             +SDPCEH   G +  +G FRGVF+ F  SK R+ L++R A L     CPYC  ++WSM  
Sbjct:   156 MSDPCEHQAVGGDEHLGVFRGVFREFMRSKTRECLVRRQAALEEKVRCPYCGGRVWSMTA 215

Query:   201 AKMIPQSASCRLGAYEDCIEYYVCLNGHMLGICSLLPLSDSEE 243
             A+++P+SA+ RLG+ E  +E++VC+NGH+ G C L+PLS  EE
Sbjct:   216 ARLVPKSAARRLGSREGGLEFFVCVNGHLHGTCWLIPLSSEEE 258


>TAIR|locus:2133259 [details] [associations]
            symbol:EID1 "EMPFINDLICHER IM DUNKELROTEN LICHT 1"
            species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
            evidence=ISM;IDA] [GO:0009585 "red, far-red light
            phototransduction" evidence=IMP] [GO:0004842 "ubiquitin-protein
            ligase activity" evidence=ISS] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0010099 "regulation of photomorphogenesis"
            evidence=IMP] [GO:0048366 "leaf development" evidence=IMP]
            [GO:0048573 "photoperiodism, flowering" evidence=RCA;IMP]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=RCA] [GO:0032880 "regulation of protein localization"
            evidence=RCA] [GO:0042752 "regulation of circadian rhythm"
            evidence=RCA] PROSITE:PS50181 UniPathway:UPA00143 GO:GO:0005634
            EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009585 GO:GO:0048573
            GO:GO:0048366 GO:GO:0004842 GO:GO:0010099 EMBL:AL161494
            EMBL:AF069298 EMBL:BT002038 EMBL:BT008731 EMBL:AK229833
            EMBL:AY085530 IPI:IPI00516571 PIR:T01306 RefSeq:NP_192153.1
            UniGene:At.3886 UniGene:At.43977 ProteinModelPortal:Q8LEA8
            IntAct:Q8LEA8 STRING:Q8LEA8 PaxDb:Q8LEA8 PRIDE:Q8LEA8
            EnsemblPlants:AT4G02440.1 GeneID:828008 KEGG:ath:AT4G02440
            TAIR:At4g02440 eggNOG:NOG256353 HOGENOM:HOG000030777
            InParanoid:Q8LEA8 OMA:WSLYDDL PhylomeDB:Q8LEA8
            ProtClustDB:CLSN2685743 Genevestigator:Q8LEA8 GermOnline:AT4G02440
            Uniprot:Q8LEA8
        Length = 336

 Score = 118 (46.6 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
 Identities = 35/120 (29%), Positives = 55/120 (45%)

Query:   122 SRTSGKSFLLPQCRTDVLYVSD-P-CEHLDQGEEGDVGFFRGVFKSFQMSKVRKMLIKRG 179
             SR  G   L  + R D LY+ + P C H++  E+ +   FRGVFK F+ S+V + +    
Sbjct:   218 SREQGNKLLASRFRGDCLYICNWPGCIHVE--EKRNYMLFRGVFKDFKRSRVWRTINDGN 275

Query:   180 AQLHPTEACPYCKA-KLWSMLQAKMIPQSASCRLGAYEDCIEYYVCLNGHMLGICSLLPL 238
                     C +C   + W +  +  + +         E  +  YVC NGH+ G  + LPL
Sbjct:   276 RSKTSGLKCAFCLCDETWDLHSSFCLRRVFGFHDDG-EPVVRAYVCENGHVSGAWTALPL 334

 Score = 102 (41.0 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
 Identities = 28/99 (28%), Positives = 45/99 (45%)

Query:    22 LSEDVIFLVFQHMNWNPKTIAALSCTCKWFDDLAKRVLWKEFCRTRAPKMMVDL------ 75
             + EDV+F +F  +  +P+  A L+C C  F  + + V  K  C +  P ++ DL      
Sbjct:     9 IPEDVVFNIFFKLQDDPRNWARLACVCTKFSSIVRNVCCKTQCYSAIPTVISDLLPLPPS 68

Query:    76 ---QSSGSHSVD------GNWRALGKLLIYCSGCKKGGL 105
                 +S S + D      G W +L KL + C G    G+
Sbjct:    69 AAASASSSTAADSSLTPPGGWASLYKLAVCCPGLFHAGI 107

 Score = 36 (17.7 bits), Expect = 9.9e-05, Sum P(2) = 9.9e-05
 Identities = 6/12 (50%), Positives = 7/12 (58%)

Query:    76 QSSGSHSVDGNW 87
             +S GSH   G W
Sbjct:   204 RSLGSHLASGGW 215


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.324   0.137   0.449    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      248       248   0.00079  114 3  11 22  0.38    33
                                                     32  0.46    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  618 (66 KB)
  Total size of DFA:  231 KB (2125 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  19.01u 0.11s 19.12t   Elapsed:  00:00:01
  Total cpu time:  19.01u 0.11s 19.12t   Elapsed:  00:00:01
  Start:  Sat May 11 01:53:08 2013   End:  Sat May 11 01:53:09 2013

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