BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>025769
MLSSSYFSVGNIMRSSINIPVYFFVFPVFFSLLRLQTMTNLRSFGRFGKTTEIDEPEHDN
PQQHVLDVAPLNSMPYIGPPTPPSDFGSTSRKQETEAAENVGPAMVFLPSYSTREELDNI
IAVTKTGVALTGVAALGKVGTGIGAVDIAESDDSYAFRVALPGVARDEKDFTCDIDPDGK
VTIKGVTTTGEKTVCKQNQVFKMLTQNLSPPGHFSISFKLPGPVNTEDFTGKFGTDGILE
GLVKKSVA

High Scoring Gene Products

Symbol, full name Information P value
AT1G54850 protein from Arabidopsis thaliana 4.3e-54
AT1G54840 protein from Arabidopsis thaliana 4.2e-24
AT1G20870 protein from Arabidopsis thaliana 4.9e-17
AT1G76440 protein from Arabidopsis thaliana 3.3e-15

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  025769
        (248 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2010995 - symbol:AT1G54850 "AT1G54850" species...   559  4.3e-54   1
TAIR|locus:2010945 - symbol:AT1G54840 "AT1G54840" species...   276  4.2e-24   1
TAIR|locus:2037380 - symbol:AT1G20870 "AT1G20870" species...   216  4.9e-17   1
TAIR|locus:2011696 - symbol:AT1G76440 "AT1G76440" species...   192  3.3e-15   1


>TAIR|locus:2010995 [details] [associations]
            symbol:AT1G54850 "AT1G54850" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] [GO:0005730 "nucleolus" evidence=IDA] [GO:0009408
            "response to heat" evidence=RCA] [GO:0009644 "response to high
            light intensity" evidence=RCA] [GO:0042542 "response to hydrogen
            peroxide" evidence=RCA] Pfam:PF00011 InterPro:IPR002068
            EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005730 GO:GO:0006950
            PROSITE:PS01031 EMBL:BT002968 EMBL:BT004411 IPI:IPI00525916
            RefSeq:NP_175882.2 UniGene:At.37161 ProteinModelPortal:Q84K79
            SMR:Q84K79 PaxDb:Q84K79 PRIDE:Q84K79 EnsemblPlants:AT1G54850.1
            GeneID:841924 KEGG:ath:AT1G54850 TAIR:At1g54850 eggNOG:NOG319596
            HOGENOM:HOG000091018 InParanoid:Q84K79 OMA:PVTHASM PhylomeDB:Q84K79
            ProtClustDB:CLSN2680498 ArrayExpress:Q84K79 Genevestigator:Q84K79
            Uniprot:Q84K79
        Length = 206

 Score = 559 (201.8 bits), Expect = 4.3e-54, P = 4.3e-54
 Identities = 111/187 (59%), Positives = 137/187 (73%)

Query:    60 NPQQHVLDVAPLNSMPYIGPPTPPSDFGSTSRKQETEAAENVG-PAMVFLPSYSTREELD 118
             NPQ  +L+V PLNSMPYIGP T      S S  +  ++ E VG PAM+FLPS S+  E  
Sbjct:    22 NPQ--ILEVTPLNSMPYIGPVT----HASMSSNRMNDSVEKVGGPAMIFLPSDSS-SEFS 74

Query:   119 NIIAVTKTGVALTGVAALGKVGTGIGAVDIAESDDSYAFRVALPGVARDEKDFTCDIDPD 178
             N+I+ TKTGVALTG AA+GK+G  IG VDIAES+DSY FRVALPGV+RDEK+F+C+I+PD
Sbjct:    75 NLISQTKTGVALTGSAAMGKIGLTIGLVDIAESEDSYYFRVALPGVSRDEKEFSCEIEPD 134

Query:   179 XXXXXXXXXXXXXXXXCKQNQVFKMLTQNLSPPGHFSISFKLPGPVNTEDFTGKFGTDGI 238
                             CK NQ+FKMLTQNL PPGHF+I+F+LPGPV+ E+F G FG+DG+
Sbjct:   135 GKIMIKGATTTGEQTVCKHNQIFKMLTQNLCPPGHFTINFQLPGPVSNEEFNGNFGSDGV 194

Query:   239 LEGLVKK 245
             LEG+VKK
Sbjct:   195 LEGVVKK 201


>TAIR|locus:2010945 [details] [associations]
            symbol:AT1G54840 "AT1G54840" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0005737 "cytoplasm" evidence=ISM]
            [GO:0008150 "biological_process" evidence=ND] [GO:0009408 "response
            to heat" evidence=RCA] [GO:0009644 "response to high light
            intensity" evidence=RCA] [GO:0042542 "response to hydrogen
            peroxide" evidence=RCA] [GO:0048451 "petal formation" evidence=RCA]
            [GO:0048453 "sepal formation" evidence=RCA] InterPro:IPR002068
            EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0006950
            PROSITE:PS01031 UniGene:At.10845 UniGene:At.48309 EMBL:AY093020
            EMBL:AY128943 IPI:IPI00531355 RefSeq:NP_175881.2
            ProteinModelPortal:Q8RWL4 IntAct:Q8RWL4 EnsemblPlants:AT1G54840.1
            GeneID:841923 KEGG:ath:AT1G54840 TAIR:At1g54840 eggNOG:NOG266122
            HOGENOM:HOG000091019 InParanoid:Q8RWL4 OMA:FSCEVED PhylomeDB:Q8RWL4
            ProtClustDB:CLSN2680496 ArrayExpress:Q8RWL4 Genevestigator:Q8RWL4
            Uniprot:Q8RWL4
        Length = 349

 Score = 276 (102.2 bits), Expect = 4.2e-24, P = 4.2e-24
 Identities = 50/108 (46%), Positives = 74/108 (68%)

Query:   140 GTGIGAVDIAESDDSYAFRVALPGVARDEKDFTCDIDPDXXXXXXXXXXXXXXXXCKQNQ 199
             G  +G +DI E DD+Y FRV+LPGV RDE+ F+C+++ +                 + + 
Sbjct:   237 GLMVGLMDIGECDDAYLFRVSLPGVKRDERYFSCEVEDNGKVLVRGVTTTGGKRVKRYSH 296

Query:   200 VFKMLTQNLSPPGHFSISFKLPGPVNTEDFTGKFGTDGILEGLVKKSV 247
             VF+M T++L PPG+FS+SF+LPGPV+  +F+G FGTDGILEG+V K++
Sbjct:   297 VFEMQTRSLCPPGNFSVSFRLPGPVHPHEFSGNFGTDGILEGVVMKNL 344


>TAIR|locus:2037380 [details] [associations]
            symbol:AT1G20870 "AT1G20870" species:3702 "Arabidopsis
            thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0009408
            "response to heat" evidence=RCA] [GO:0009644 "response to high
            light intensity" evidence=RCA] [GO:0042542 "response to hydrogen
            peroxide" evidence=RCA] EMBL:CP002684 GenomeReviews:CT485782_GR
            GO:GO:0006950 EMBL:AC007369 eggNOG:NOG266122 IPI:IPI00545650
            PIR:C86341 RefSeq:NP_173511.1 UniGene:At.51700
            ProteinModelPortal:Q9SYQ0 SMR:Q9SYQ0 PRIDE:Q9SYQ0
            EnsemblPlants:AT1G20870.1 GeneID:838680 KEGG:ath:AT1G20870
            TAIR:At1g20870 HOGENOM:HOG000153567 InParanoid:Q9SYQ0 OMA:FSCEIES
            PhylomeDB:Q9SYQ0 ProtClustDB:CLSN2914689 Genevestigator:Q9SYQ0
            Uniprot:Q9SYQ0
        Length = 463

 Score = 216 (81.1 bits), Expect = 4.9e-17, P = 4.9e-17
 Identities = 43/116 (37%), Positives = 66/116 (56%)

Query:   128 VALTGVAALGKVGTGIGAVDIAESDDSYAFRVALPGVARDEKDFTCDIDPDXXXXXXXXX 187
             V  TG A+   +G+ +G VDI  +  +Y F+VALPGV +D  +F+C+I+ D         
Sbjct:   342 VVTTGTASKETLGSSVGVVDIGVNKVAYFFQVALPGVRKDYGEFSCEIESDGKVILEGST 401

Query:   188 XXXXXXXCKQNQVFKMLTQNLSPPGHFSISFKLPGPVNTEDFTGKFGTDGILEGLV 243
                     + ++VF+M  + L PPG F + F LPGPV+   F+  F +DGI EG++
Sbjct:   402 TRGEKNIKRHSRVFEMNIRKLCPPGPFKLCFNLPGPVDPRLFSPNFRSDGIFEGVI 457


>TAIR|locus:2011696 [details] [associations]
            symbol:AT1G76440 "AT1G76440" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
            "cellular_component" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR002068 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0006950 PROSITE:PS01031
            EMBL:AC012394 EMBL:AC015450 EMBL:AY128378 EMBL:BT000371
            EMBL:AK317538 IPI:IPI00539280 PIR:B96792 RefSeq:NP_001031287.1
            RefSeq:NP_177770.1 RefSeq:NP_974155.1 UniGene:At.34653
            ProteinModelPortal:Q9S842 SMR:Q9S842 PRIDE:Q9S842 DNASU:843977
            EnsemblPlants:AT1G76440.1 EnsemblPlants:AT1G76440.2
            EnsemblPlants:AT1G76440.3 GeneID:843977 KEGG:ath:AT1G76440
            TAIR:At1g76440 eggNOG:NOG297869 HOGENOM:HOG000090358
            InParanoid:Q9S842 OMA:VQQLCPP PhylomeDB:Q9S842
            ProtClustDB:CLSN2682760 Genevestigator:Q9S842 Uniprot:Q9S842
        Length = 143

 Score = 192 (72.6 bits), Expect = 3.3e-15, P = 3.3e-15
 Identities = 45/118 (38%), Positives = 62/118 (52%)

Query:   128 VALTGVAALGKVGTGIGAVDIAESDDSYAFRVALPGVARDEKDFTCDIDPDXXXXXXXXX 187
             V  TG A LG VG  IG VDI  S+ +Y FRV+LPG+ +++    C+I  +         
Sbjct:    19 VFCTGTAKLGSVGPPIGLVDIGVSEVAYIFRVSLPGIEKNQDKIKCEIQREGRVCIQGVI 78

Query:   188 XXXXXXXCKQNQVFKMLTQNLSPPGHFSISFKLPGPVNTEDFTGKFGTDGILEGLVKK 245
                         +++M  Q L PPG FSI+F LPG V+   F+  F +DGI E +V K
Sbjct:    79 PEIAIPS-DTGCLYRMQVQQLCPPGPFSITFNLPGQVDPRLFSPNFRSDGIFEVVVVK 135


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.315   0.134   0.384    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      248       221   0.00095  112 3  11 23  0.43    33
                                                     32  0.40    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  560 (60 KB)
  Total size of DFA:  148 KB (2091 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  20.09u 0.14s 20.23t   Elapsed:  00:00:01
  Total cpu time:  20.09u 0.14s 20.23t   Elapsed:  00:00:01
  Start:  Sat May 11 01:57:50 2013   End:  Sat May 11 01:57:51 2013

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