RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= 025769
(248 letters)
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain,
chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Length = 123
Score = 53.4 bits (129), Expect = 2e-09
Identities = 15/103 (14%), Positives = 37/103 (35%), Gaps = 14/103 (13%)
Query: 145 AVDIAESDDSYAFRVALPGVARDEKDFTCDIDPDGKVTIKGVTTTGEKTVCKQNQVFKML 204
VD+ E L G +++ + ++ I+ E+ + + +
Sbjct: 26 PVDMYEEGGYLVVVADLAGF--NKEKIKARVSGQNELIIE-----AEREITEPGVKYLT- 77
Query: 205 TQNLSPPGHFSISFKLPGPVNTE-DFTGKFGTDGILEGLVKKS 246
P + +LP V + + +GK+ +G+L + +
Sbjct: 78 ----QRPKYVRKVIRLPYNVAKDAEISGKY-ENGVLTIRIPIA 115
>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A
{Methanocaldococcus jannaschii} PDB: 1shs_A
Length = 161
Score = 52.4 bits (126), Expect = 7e-09
Identities = 20/101 (19%), Positives = 40/101 (39%), Gaps = 9/101 (8%)
Query: 140 GTGIGAVDIAESDDSYAFRVALPGVARDEKDFTCDIDPDGKVTIKGVTTTGEKTVCKQNQ 199
G G + I E D LPGV +++D + + I+ +++ +
Sbjct: 53 GKGFMPISIIEGDQHIKVIAWLPGV--NKEDIILNAV-GDTLEIR-----AKRSPLMITE 104
Query: 200 VFKMLTQNLSPPGHFSISFKLPGPVNTEDFTGKFGTDGILE 240
+++ + + KLP V E+ + KF +G+L
Sbjct: 105 SERIIYSEIPEEEEIYRTIKLPATVKEENASAKF-ENGVLS 144
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high
resolution, stress response, chaperone; 1.64A
{Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Length = 100
Score = 50.9 bits (123), Expect = 7e-09
Identities = 23/102 (22%), Positives = 37/102 (36%), Gaps = 10/102 (9%)
Query: 145 AVDIAESDDSYAFRVALPGVARDEKDFTCDIDPDGKVTIKGVTTTGEKTVCKQNQVFKML 204
VDI E + + LPG+ D +D G ++I+G E + +
Sbjct: 6 RVDIKEEVNHFVLYADLPGI--DPSQIEVQMD-KGILSIRG-ERKSESSTETERFSRIER 61
Query: 205 TQNLSPPGHFSISFKLPGPVNTEDFTGKFGTDGILEGLVKKS 246
G F F LP + + T +G+LE + K
Sbjct: 62 RY-----GSFHRRFALPDSADADGITAAG-RNGVLEIRIPKR 97
>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone,
alpha-crystallin; 2.70A {Triticum aestivum} SCOP:
b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A
Length = 151
Score = 49.6 bits (119), Expect = 6e-08
Identities = 22/102 (21%), Positives = 45/102 (44%), Gaps = 9/102 (8%)
Query: 145 AVDIAESDDSYAFRVALPGVARDEKDFTCDIDPDGKVTIKGVTTTGEKTVCKQNQVFKML 204
+D E+ +++ F+ LPGV +++ +++ + + GE+T K+++ K
Sbjct: 45 RMDWKETPEAHVFKADLPGV--KKEEVKVEVEDGNVLVVS-----GERTKEKEDKNDKWH 97
Query: 205 TQNLSPPGHFSISFKLPGPVNTEDFTGKFGTDGILEGLVKKS 246
S G F F+L E+ +G+L V K+
Sbjct: 98 RVERS-SGKFVRRFRLLEDAKVEEVKAGL-ENGVLTVTVPKA 137
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 45.0 bits (106), Expect = 1e-05
Identities = 45/256 (17%), Positives = 72/256 (28%), Gaps = 81/256 (31%)
Query: 18 NIPVYF------------FVFPVFFS----LLRLQTMTNLRSFGRFGKTTEI----DEPE 57
N YF V + L L T L + F + I + P
Sbjct: 165 NTDDYFEELRDLYQTYHVLVGDLIKFSAETLSELIR-TTLDAEKVFTQGLNILEWLENPS 223
Query: 58 HDNPQQHVLDVAPLNSMPYIGPPTPPSDFGSTSRKQETEAAENVGPAMVFLPSYSTREEL 117
+ P + L P+ S P IG A+ +G ++ E
Sbjct: 224 -NTPDKDYLLSIPI-SCPLIG---------VIQLAHYVVTAKLLG--------FTPGELR 264
Query: 118 DNIIAVTKTGVALTGVAALGKVGTGIGAVDIAESDDSYAFRVALP---------GVARDE 168
+ T L + AV IAE+D +F V++ GV R
Sbjct: 265 SYLKGATGHSQGL------------VTAVAIAETDSWESFFVSVRKAITVLFFIGV-RCY 311
Query: 169 KDF-TCDIDPDGKVTIKGVTTTGEKT------V--CKQNQVFKMLTQ-NLSPPGHFSISF 218
+ + + P ++ E + Q QV + + N P +
Sbjct: 312 EAYPNTSLPPS---ILEDSLENNEGVPSPMLSISNLTQEQVQDYVNKTNSHLPAGKQVEI 368
Query: 219 KLPGPVNTED-F--TG 231
L VN +G
Sbjct: 369 SL---VNGAKNLVVSG 381
Score = 31.9 bits (72), Expect = 0.19
Identities = 33/162 (20%), Positives = 41/162 (25%), Gaps = 88/162 (54%)
Query: 15 SSINIPVYFFVFPVFFSLLRLQTMT--NLRSFGRFGKTTE--ID----EPEH-----DNP 61
I IPVY T +LR G +E +D P
Sbjct: 453 KDIQIPVY-------------DTFDGSDLRVLS--GSISERIVDCIIRLPVKWETTTQFK 497
Query: 62 QQHVLDVAPLNSMPYIGPPTPPSDFGSTSRKQETEAAENVGPAMVFLPSYSTREELDNII 121
H+LD GP G S +G
Sbjct: 498 ATHILD---------FGP-------GGASG---------LGV------------------ 514
Query: 122 AVTKTGVALTGVAALGKVGTGI-----GAVDIAESDDSYAFR 158
LT K GTG+ G +DI DD Y F+
Sbjct: 515 --------LTHRN---KDGTGVRVIVAGTLDIN-PDDDYGFK 544
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress
response; 1.12A {Rattus norvegicus}
Length = 101
Score = 40.1 bits (94), Expect = 5e-05
Identities = 9/96 (9%), Positives = 27/96 (28%), Gaps = 16/96 (16%)
Query: 144 GAVDIAESDDSYAFRVALPGVARDEKDFTCDIDPDGKVTIKGVTTTGEKTVCKQNQVFKM 203
+ ++ + + + +E V + + + ++ +
Sbjct: 2 AMAQVPTDPGYFSVLLDVKHFSPEEISVKVV---GDHVEVHA------RHEERPDEHGFI 52
Query: 204 LTQNLSPPGHFSISFKLPGPVNTEDFTGKFGTDGIL 239
F ++LP V+ T +G+L
Sbjct: 53 AR-------EFHRRYRLPPGVDPAAVTSALSPEGVL 81
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity,
protein aggregation, CRYS eye lens protein, chaperone;
1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Length = 106
Score = 39.1 bits (91), Expect = 1e-04
Identities = 15/98 (15%), Positives = 32/98 (32%), Gaps = 16/98 (16%)
Query: 142 GIGAVDIAESDDSYAFRVALPGVARDEKDFTCDIDPDGKVTIKGVTTTGEKTVCKQNQVF 201
G G ++ D + + + + ++ + V I G K +Q+
Sbjct: 1 GSGISEVRSDRDKFVIFLDVKHFSPEDLTVKVQ---EDFVEIHG------KHNERQDDHG 51
Query: 202 KMLTQNLSPPGHFSISFKLPGPVNTEDFTGKFGTDGIL 239
+ F ++LP V+ + DG+L
Sbjct: 52 YIS-------REFHRRYRLPSNVDQSALSCSLSADGML 82
>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity,
intermolecular INTE chaperone, SHSP, human, small
heat-shock protein, cataract; NMR {Homo sapiens} PDB:
2ygd_A
Length = 175
Score = 38.0 bits (88), Expect = 0.001
Identities = 12/96 (12%), Positives = 33/96 (34%), Gaps = 16/96 (16%)
Query: 144 GAVDIAESDDSYAFRVALPGVARDEKDFTCDIDPDGKVTIKGVTTTGEKTVCKQNQVFKM 203
G ++ D ++ + + ++ + + + G K +Q++ +
Sbjct: 64 GLSEMRLEKDRFSVNLDVKHF--SPEELKVKVL-GDVIEVHG------KHEERQDEHGFI 114
Query: 204 LTQNLSPPGHFSISFKLPGPVNTEDFTGKFGTDGIL 239
F +++P V+ T +DG+L
Sbjct: 115 S-------REFHRKYRIPADVDPLTITSSLSSDGVL 143
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone,
charcot-marie-tooth DISE neuronopathy, IG-like fold,
stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Length = 85
Score = 34.2 bits (79), Expect = 0.006
Identities = 17/91 (18%), Positives = 31/91 (34%), Gaps = 16/91 (17%)
Query: 149 AESDDSYAFRVALPGVARDEKDFTCDIDPDGKVTIKGVTTTGEKTVCKQNQVFKMLTQNL 208
+ + D + + + A DE DG V I G K +Q++ +
Sbjct: 3 SHTADRWRVSLDVNHFAPDELTVKTK---DGVVEITG------KHAARQDEHGYISRC-- 51
Query: 209 SPPGHFSISFKLPGPVNTEDFTGKFGTDGIL 239
F+ + LP V+ + +G L
Sbjct: 52 -----FTRKYTLPPGVDPTQVSSSLSPEGTL 77
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone,
stress protein, eye LEN protein, cataract; HET: MSE;
2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Length = 90
Score = 33.2 bits (76), Expect = 0.015
Identities = 12/91 (13%), Positives = 32/91 (35%), Gaps = 16/91 (17%)
Query: 149 AESDDSYAFRVALPGVARDEKDFTCDIDPDGKVTIKGVTTTGEKTVCKQNQVFKMLTQNL 208
A D ++ + + + + + + + + G K +Q++ +
Sbjct: 2 AMEKDRFSVNLDVKHFSPE--ELKVKVL-GDVIEVHG------KHEERQDEHGFIS---- 48
Query: 209 SPPGHFSISFKLPGPVNTEDFTGKFGTDGIL 239
F +++P V+ T +DG+L
Sbjct: 49 ---REFHRKYRIPADVDPLTITSSMSSDGVL 76
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 35.2 bits (80), Expect = 0.017
Identities = 27/208 (12%), Positives = 52/208 (25%), Gaps = 65/208 (31%)
Query: 30 FSLLRLQTMTNLRSFGRFGKTTEID-----EPEHDNPQQHVLDVAPLNSMPYIGPPTPPS 84
F L + ++ F + I+ P +Q P+ +
Sbjct: 68 FWTLLSKQEEMVQKF--VEEVLRINYKFLMSPIKTEQRQ----------------PSMMT 109
Query: 85 DFGSTSRKQETEAAENVGPAMVFLPSYSTREELDNIIAVTK--------TGVALTGVAAL 136
R + N VF +R + + + + V + GV
Sbjct: 110 RMYIEQR----DRLYNDNQ--VFAKYNVSRLQP--YLKLRQALLELRPAKNVLIDGVLGS 161
Query: 137 GKVGTGIGAVDIAESDDSYAFRVALPGVARDEKDFTCDIDPDGKV---TIKGVTTTGEKT 193
GK + V K C D K+ + + E
Sbjct: 162 GK------TWVALD-------------VCLSYK-VQC--KMDFKIFWLNL-KNCNSPETV 198
Query: 194 VCKQNQVFKMLTQNLSPPGHFSISFKLP 221
+ ++ + N + S + KL
Sbjct: 199 LEMLQKLLYQIDPNWTSRSDHSSNIKLR 226
>2ebm_A RWD domain-containing protein 1; alpha+beta sandwich fold, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 128
Score = 30.7 bits (69), Expect = 0.19
Identities = 18/81 (22%), Positives = 30/81 (37%), Gaps = 8/81 (9%)
Query: 54 DEPEHDNPQQHVLDVAPLNSMPYIGPP--------TPPSDFGSTSRKQETEAAENVGPAM 105
+ E+D Q L P P +D + +A EN+G M
Sbjct: 47 EAGENDETVQTTLKFTYSEKYPDEAPLYEIFSQENLEDNDVSDILKLLALQAEENLGMVM 106
Query: 106 VFLPSYSTREELDNIIAVTKT 126
+F + +E+L+ I+ KT
Sbjct: 107 IFTLVTAVQEKLNEIVDQIKT 127
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone;
2.5A {Taenia saginata}
Length = 314
Score = 31.0 bits (69), Expect = 0.34
Identities = 10/90 (11%), Positives = 21/90 (23%), Gaps = 17/90 (18%)
Query: 150 ESDDSYAFRVALPGVARDEKDFTCDIDPDGKVTIKGVTTTGEKTVCKQNQVFKMLTQNLS 209
+ + + + + T D K+ ++ +
Sbjct: 109 DGRLHFKVYFNVKNFKAE--EITIKAD-KNKLVVRA------QKSVACGDAAMS------ 153
Query: 210 PPGHFSISFKLPGPVNTEDFTGKFGTDGIL 239
S LP V+ TD +L
Sbjct: 154 --ESVGRSIPLPPSVDRNHIQATITTDDVL 181
Score = 28.6 bits (63), Expect = 2.0
Identities = 17/96 (17%), Positives = 29/96 (30%), Gaps = 15/96 (15%)
Query: 145 AVDIAESDDSYAFRVAL-PGVARDEKDFTCDIDPDGKVTIKGVTTTGEKTVCKQNQVFKM 203
V + + + P A + KV + GVT EKT + +
Sbjct: 225 IVTAEDGSKKIHLELKVDPHFAPKDVKVWAK---GNKVYVHGVTGKEEKTENASHSEHR- 280
Query: 204 LTQNLSPPGHFSISFKLPGPVNTEDFTGKFGTDGIL 239
F +F P V+ + DG++
Sbjct: 281 ---------EFYKAFVTPEVVDASKTQAEI-VDGLM 306
>3p9y_A CG14216, LD40846P; phosphatase, CIS proline, LMW PTP-like fold, RNA
polymerase hydrolase; HET: N7P SEP SET IMD PG4; 2.10A
{Drosophila melanogaster} PDB: 3fdf_A 3fmv_A 3omx_A
3omw_A
Length = 198
Score = 28.2 bits (63), Expect = 1.7
Identities = 17/62 (27%), Positives = 22/62 (35%), Gaps = 9/62 (14%)
Query: 193 TVCKQNQVFKMLTQN-LSPPGHFSISF------KLPGPVNTEDFTGKFGT--DGILEGLV 243
V N M N L+ G S+ KLPG + +FGT + I L
Sbjct: 14 VVDSSNMNRSMEAHNFLAKKGFNVRSYGTGERVKLPGMAFDKPNVYEFGTKYEDIYRDLE 73
Query: 244 KK 245
K
Sbjct: 74 SK 75
>2jhp_A VP4 core protein; viral protein, viral capping enzyme, virion PR
viral protein; HET: SAH GUN; 2.5A {Bluetongue virus 10}
PDB: 2jh8_A* 2jha_A* 2jhc_A* 2jh9_A*
Length = 644
Score = 28.9 bits (64), Expect = 1.8
Identities = 12/61 (19%), Positives = 20/61 (32%), Gaps = 5/61 (8%)
Query: 19 IPVYFFVFPVFFSLLRLQ-----TMTNLRSFGRFGKTTEIDEPEHDNPQQHVLDVAPLNS 73
IP + + L Q M LR+F R + +D H + + +
Sbjct: 309 IPNSKDEYHCISTYLFPQPGADADMYELRNFMRLRGYSHVDRHMHPDASVTKVVSRDVRK 368
Query: 74 M 74
M
Sbjct: 369 M 369
>3o2q_B RNA polymerase II subunit A C-terminal domain PHO SSU72; heat
repeat, scaffold, phosphatase, polymerase II CTD, CIS-P
hydrolase; HET: SEP; 2.40A {Homo sapiens} PDB: 3o2s_B
Length = 214
Score = 27.9 bits (62), Expect = 2.9
Identities = 20/62 (32%), Positives = 24/62 (38%), Gaps = 9/62 (14%)
Query: 193 TVCKQNQVFKMLTQN-LSPPGHFSISF------KLPGPVNTEDFTGKFGT--DGILEGLV 243
V NQ M N LS G SF KLPGP + F T D + L+
Sbjct: 30 VVSSSNQNRSMEAHNILSKRGFSVRSFGTGTHVKLPGPAPDKPNVYDFKTTYDQMYNDLL 89
Query: 244 KK 245
+K
Sbjct: 90 RK 91
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid,
S-adenosyl-L-homocysteine hydro NAD, one-carbon
metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei}
PDB: 3glq_A*
Length = 494
Score = 27.8 bits (62), Expect = 3.5
Identities = 33/123 (26%), Positives = 42/123 (34%), Gaps = 32/123 (26%)
Query: 111 YSTREELDNIIAVTKTGVALTG----VAALGKVGTGIGA--------VDIAESDDSYAFR 158
Y RE L + I T V + G VA G VG G V + E D A +
Sbjct: 257 YGCRESLVDGIKRA-TDVMIAGKIAVVAGYGDVGKGCAQSLRGLGATVWVTEIDPICALQ 315
Query: 159 VALPG---VARDEKDFTCDIDPDGKVTIKGVTTTGEKTVCKQNQVFKMLTQ----NLSPP 211
A+ G V + DI VT TG V + + M N+
Sbjct: 316 AAMEGYRVVTMEYAADKADI---------FVTATGNYHVINHDHMKAMRHNAIVCNI--- 363
Query: 212 GHF 214
GHF
Sbjct: 364 GHF 366
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium
falciparum} SCOP: c.2.1.4 c.23.12.3
Length = 479
Score = 27.8 bits (62), Expect = 3.5
Identities = 30/122 (24%), Positives = 42/122 (34%), Gaps = 30/122 (24%)
Query: 111 YSTREEL-DNIIAVTKTGVA--LTGVAALGKVGTGIGA--------VDIAESDDSYAFRV 159
Y R L D ++ T ++ + + G VG G + V I E D A +
Sbjct: 237 YGCRHSLPDGLMRATDFLISGKIVVICGYGDVGKGCASSMKGLGARVYITEIDPICAIQA 296
Query: 160 ALPG---VARDEKDFTCDIDPDGKVTIKGVTTTGEKTVCKQNQVFKMLTQ----NLSPPG 212
+ G V DE D +T TG V K + KM N+ G
Sbjct: 297 VMEGFNVVTLDEIVDKGDF---------FITCTGNVDVIKLEHLLKMKNNAVVGNI---G 344
Query: 213 HF 214
HF
Sbjct: 345 HF 346
>1c8b_A Spore protease; novel fold, hydrolase; 3.00A {Bacillus megaterium}
SCOP: c.56.1.2
Length = 371
Score = 27.1 bits (60), Expect = 5.5
Identities = 15/83 (18%), Positives = 31/83 (37%), Gaps = 5/83 (6%)
Query: 108 LPSYSTREELDNIIAVTKTGVALTGVAALGK-VGT--GIGAVDIAESDDSYAFRVALPGV 164
+ +E+ + + ++ + G A+GK G + +V I E D
Sbjct: 37 IKGVIVKEKEEQGVKISMVEITEEGAEAIGKKKGRYVTLESVGIREQDTEKQEEAMEEVF 96
Query: 165 ARDEKDF--TCDIDPDGKVTIKG 185
A++ F + +I D + G
Sbjct: 97 AKELNFFIKSLNIPDDASCLVVG 119
>1ng6_A Hypothetical protein YQEY; structural genomics, domain GATB/YQEY,
PFAM02637, DUF186, PSI, protein structure initiative;
1.40A {Bacillus subtilis} SCOP: a.182.1.1
Length = 148
Score = 26.0 bits (58), Expect = 7.4
Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 4/35 (11%)
Query: 107 FLPSYSTREELDNII--AVTKTGVALTGVAALGKV 139
+LP + EEL I+ + + G + A +GKV
Sbjct: 90 YLPEQLSEEELRTIVNETIAEVGA--SSKADMGKV 122
>2ebk_A RWD domain-containing protein 3; alpha+beta sandwich fold, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 128
Score = 26.0 bits (57), Expect = 7.4
Identities = 7/34 (20%), Positives = 15/34 (44%)
Query: 94 ETEAAENVGPAMVFLPSYSTREELDNIIAVTKTG 127
+A + MV ++ L +I++ +TG
Sbjct: 95 LEQAESLLSEPMVHELVLWIQQNLRHILSQPETG 128
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers,
NAD binding DOMA amino acid insertional region,
hydrolase; HET: ADN NAD; 1.60A {Mycobacterium
tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Length = 494
Score = 26.7 bits (59), Expect = 9.8
Identities = 32/122 (26%), Positives = 41/122 (33%), Gaps = 30/122 (24%)
Query: 111 YSTREEL-DNIIAVTKTGVA--LTGVAALGKVGTGI-------GA-VDIAESDDSYAFRV 159
Y TR L D I T + + G VG G GA V + E D A +
Sbjct: 254 YGTRHSLIDGINRGTDALIGGKKVLICGYGDVGKGCAEAMKGQGARVSVTEIDPINALQA 313
Query: 160 ALPG---VARDEKDFTCDIDPDGKVTIKGVTTTGEKTVCKQNQVFKMLTQ----NLSPPG 212
+ G V +E DI VT TG K + + M N+ G
Sbjct: 314 MMEGFDVVTVEEAIGDADI---------VVTATGNKDIIMLEHIKAMKDHAILGNI---G 361
Query: 213 HF 214
HF
Sbjct: 362 HF 363
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.317 0.135 0.392
Gapped
Lambda K H
0.267 0.0672 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 3,794,248
Number of extensions: 232864
Number of successful extensions: 481
Number of sequences better than 10.0: 1
Number of HSP's gapped: 473
Number of HSP's successfully gapped: 28
Length of query: 248
Length of database: 6,701,793
Length adjustment: 91
Effective length of query: 157
Effective length of database: 4,160,982
Effective search space: 653274174
Effective search space used: 653274174
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 56 (25.5 bits)