Your job contains 1 sequence.
>025770
MPEKITAENILDNLVETISDKVQKQKAVSFFEEETSSSVTARFNRLFGRQKPVHHLLGGG
KSADVLLWRNKKISASVLMGATAIWVLFEWLNYHFLTIVCFALVLGMLAQFFWVNISGLF
NRSPSKVPRFVLPPEVFANIGTTVCANVNEALGLLQDISCGGKLKQLLVAVASLWVAAVI
GSWCNLLTVLYIGFVAAHTLPVLYEKHEDKVDSFLNNVFQQLQNQYKKLDSGFLSKIPKG
KFKGKKSE
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 025770
(248 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2062882 - symbol:AT2G46170 species:3702 "Arabi... 416 6.1e-39 1
TAIR|locus:2128494 - symbol:BTI1 "VIRB2-interacting prote... 378 6.5e-35 1
TAIR|locus:2160447 - symbol:BTI3 "VIRB2-interacting prote... 370 4.6e-34 1
TAIR|locus:2128238 - symbol:BTI2 "VIRB2-interacting prote... 367 9.5e-34 1
TAIR|locus:2089663 - symbol:AT3G18260 "AT3G18260" species... 343 3.3e-31 1
TAIR|locus:2082772 - symbol:AT3G61560 species:3702 "Arabi... 247 4.7e-29 2
TAIR|locus:1005716554 - symbol:AT3G10915 species:3702 "Ar... 215 2.9e-22 2
TAIR|locus:2049077 - symbol:AT2G15280 "AT2G15280" species... 241 2.1e-20 1
TAIR|locus:2080315 - symbol:AT3G54120 "AT3G54120" species... 218 5.8e-18 1
TAIR|locus:2090609 - symbol:AT3G19460 "AT3G19460" species... 138 4.7e-15 2
TAIR|locus:2046783 - symbol:RTNLB13 "AT2G23640" species:3... 119 8.4e-06 1
ZFIN|ZDB-GENE-060420-1 - symbol:rtn2a "reticulon 2a" spec... 98 0.00039 2
>TAIR|locus:2062882 [details] [associations]
symbol:AT2G46170 species:3702 "Arabidopsis thaliana"
[GO:0005783 "endoplasmic reticulum" evidence=IEA;ISS;IDA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0080167 "response
to karrikin" evidence=IEP] [GO:0006007 "glucose catabolic process"
evidence=RCA] InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845
GO:GO:0005783 GO:GO:0016021 GO:GO:0005886 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0005789 GO:GO:0080167 EMBL:AC005397
PANTHER:PTHR10994 eggNOG:NOG303514 HOGENOM:HOG000237479
EMBL:AY053421 EMBL:AY074836 IPI:IPI00521101 PIR:E84899
RefSeq:NP_566065.1 UniGene:At.13080 ProteinModelPortal:O82352
SMR:O82352 PaxDb:O82352 PRIDE:O82352 EnsemblPlants:AT2G46170.1
GeneID:819224 KEGG:ath:AT2G46170 TAIR:At2g46170 InParanoid:O82352
OMA:RPLICSI PhylomeDB:O82352 ProtClustDB:CLSN2688961
Genevestigator:O82352 Uniprot:O82352
Length = 255
Score = 416 (151.5 bits), Expect = 6.1e-39, P = 6.1e-39
Identities = 85/229 (37%), Positives = 124/229 (54%)
Query: 12 DNLVETISDKVQKQKXXXXXXXXXX-----XXXXXRFNRLFGRQKPVHHLLGGGKSADVL 66
++L+E IS+K+ + R+FGR+KPVH +LGGGK ADV
Sbjct: 13 ESLMEKISEKIHHHDSSSSSESEYEKPDSPSAVKAKIYRMFGREKPVHKVLGGGKPADVF 72
Query: 67 LWRNKKISASVLMGATAIWVLFEWLNYHFLTIVCFALVLGMLAQFFWVNISGLFNRSPSK 126
LWR+KK+S +VL ATAIWVLFE + YH L+++C +L + F W N L N++ +
Sbjct: 73 LWRDKKLSGAVLGVATAIWVLFELVEYHLLSLLCHISILALGGLFLWSNAHTLINKTSPQ 132
Query: 127 VPRFVLPPEVFANIGTTVCANVNEALGLLQDISCGGKLKQXXXXXXXXXXXXXIGSWCNL 186
+P +P E F + +++ +N+A +L+ I+ G LK+ +G+W N
Sbjct: 133 IPEIHVPEEAFLVVASSLRNELNQAFVILRSIALGRDLKKFLMVVVGLWIISVVGNWFNF 192
Query: 187 LTVLYIGFVAAHTLPVLYEKHEDKVDSXXXXXXXXXXXXYKKLDSGFLS 235
LT++YI FV HT+P+LYEKHEDKVD Y D LS
Sbjct: 193 LTLVYICFVILHTVPMLYEKHEDKVDPLAEKAMKELQKQYVVFDEKVLS 241
>TAIR|locus:2128494 [details] [associations]
symbol:BTI1 "VIRB2-interacting protein 1" species:3702
"Arabidopsis thaliana" [GO:0005783 "endoplasmic reticulum"
evidence=IEA;ISS;IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005773 "vacuole" evidence=IDA] [GO:0005789 "endoplasmic
reticulum membrane" evidence=IDA] [GO:0071458 "integral to
cytosolic side of endoplasmic reticulum membrane" evidence=IDA]
[GO:0071782 "endoplasmic reticulum tubular network" evidence=IDA]
[GO:0071786 "endoplasmic reticulum tubular network organization"
evidence=IMP] InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845
GO:GO:0005886 GO:GO:0005773 EMBL:CP002687 GenomeReviews:CT486007_GR
EMBL:AL161559 EMBL:AL035394 GO:GO:0071458 PANTHER:PTHR10994
GO:GO:0071786 EMBL:AY050321 EMBL:AY133635 EMBL:AY087881
IPI:IPI00517163 PIR:T05595 RefSeq:NP_194094.1 UniGene:At.25485
ProteinModelPortal:Q9SUR3 SMR:Q9SUR3 STRING:Q9SUR3 PaxDb:Q9SUR3
PRIDE:Q9SUR3 EnsemblPlants:AT4G23630.1 GeneID:828463
KEGG:ath:AT4G23630 TAIR:At4g23630 eggNOG:NOG242905
HOGENOM:HOG000237479 InParanoid:Q9SUR3 OMA:EIGHGRD PhylomeDB:Q9SUR3
ProtClustDB:CLSN2685988 Genevestigator:Q9SUR3 GO:GO:0071782
Uniprot:Q9SUR3
Length = 275
Score = 378 (138.1 bits), Expect = 6.5e-35, P = 6.5e-35
Identities = 72/191 (37%), Positives = 105/191 (54%)
Query: 45 RLFGRQKPVHHLLGGGKSADVLLWRNKKISASVLMGATAIWVLFEWLNYHFLTIVCFALV 104
RLFGR++PVH +LGGGK AD+ +W+NKK+S VL GATA WV+FE + YH LT++C ++
Sbjct: 72 RLFGREQPVHKVLGGGKPADIFMWKNKKMSGGVLGGATAAWVVFELMEYHLLTLLCHVMI 131
Query: 105 LGMLAQFFWVNISGLFNRSPSKVPRFVLPPEVFANIGTTVCANVNEALGLLQDISCGGKL 164
+ + F W N + N+SP K+P +P E + + + +N L++I+ G L
Sbjct: 132 VVLAVLFLWSNATMFINKSPPKIPEVHIPEEPILQLASGLRIEINRGFSSLREIASGRDL 191
Query: 165 KQXXXXXXXXXXXXXIGSWCNLLTVLYIGFVAAHTLPVLYEKHEDKVDSXXXXXXXXXXX 224
K+ +G N LT+ YI V T+P+ Y+K+EDKVD
Sbjct: 192 KKFLIAIAGLWVLSILGGCFNFLTLAYIALVLLFTVPLAYDKYEDKVDPLGEKAMIELKK 251
Query: 225 XYKKLDSGFLS 235
Y LD LS
Sbjct: 252 QYAVLDEKVLS 262
>TAIR|locus:2160447 [details] [associations]
symbol:BTI3 "VIRB2-interacting protein 3" species:3702
"Arabidopsis thaliana" [GO:0005783 "endoplasmic reticulum"
evidence=IEA;ISS;IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IDA]
[GO:0071458 "integral to cytosolic side of endoplasmic reticulum
membrane" evidence=IDA] [GO:0071782 "endoplasmic reticulum tubular
network" evidence=IDA] [GO:0071786 "endoplasmic reticulum tubular
network organization" evidence=IMP] [GO:0009506 "plasmodesma"
evidence=IDA] InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845
GO:GO:0005886 GO:GO:0009506 EMBL:CP002688 GenomeReviews:BA000015_GR
EMBL:AB005233 GO:GO:0071458 PANTHER:PTHR10994 GO:GO:0071786
eggNOG:NOG303514 HOGENOM:HOG000237479 GO:GO:0071782 EMBL:AY035169
EMBL:AY057638 EMBL:AY150449 IPI:IPI00523388 RefSeq:NP_198975.1
UniGene:At.8344 ProteinModelPortal:Q9FFS0 IntAct:Q9FFS0
STRING:Q9FFS0 PaxDb:Q9FFS0 PRIDE:Q9FFS0 EnsemblPlants:AT5G41600.1
GeneID:834162 KEGG:ath:AT5G41600 TAIR:At5g41600 InParanoid:Q9FFS0
OMA:VMWLLTY PhylomeDB:Q9FFS0 ProtClustDB:CLSN2682625
Genevestigator:Q9FFS0 Uniprot:Q9FFS0
Length = 257
Score = 370 (135.3 bits), Expect = 4.6e-34, P = 4.6e-34
Identities = 81/232 (34%), Positives = 111/232 (47%)
Query: 8 ENILDNLVETI-----SDKVQKQKXXXXXXXXXXXXXXXRFNRLFGRQKPVHHLLGGGKS 62
E+IL+ +VE I S + + RLFGR+KPVH +LGGGK
Sbjct: 9 ESILEKIVEKIHGHGDSSSLSDSDDDKKSTSSSSSSFKSKIYRLFGREKPVHKVLGGGKP 68
Query: 63 ADVLLWRNKKISASVLMGATAIWVLFEWLNYHFLTIVCFALVLGMLAQFFWVNISGLFNR 122
AD+ LWRNKK+S VL TA WVLFE YH L +C + + A F W N ++
Sbjct: 69 ADIFLWRNKKVSGGVLGAVTASWVLFELFEYHLLAFLCHFAIFALAALFLWSNACTFIHK 128
Query: 123 SPSKVPRFVLPPEVFANIGTTVCANVNEALGLLQDISCGGKLKQXXXXXXXXXXXXXIGS 182
S +P +P + + + + +N L LL++I+ G +K+ IGS
Sbjct: 129 STPHIPEVHIPEDPILQLVSGLRIEINRGLTLLRNIASGKDVKKFILVIAGLWVLSIIGS 188
Query: 183 WCNLLTVLYIGFVAAHTLPVLYEKHEDKVDSXXXXXXXXXXXXYKKLDSGFL 234
N LT+ Y V T+PVLYEK+EDKVD+ Y LD L
Sbjct: 189 CYNFLTLFYTATVLLFTIPVLYEKYEDKVDAYGEKAMREIKKQYAVLDEKVL 240
>TAIR|locus:2128238 [details] [associations]
symbol:BTI2 "VIRB2-interacting protein 2" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0005783 "endoplasmic reticulum" evidence=IEA;ISS;IDA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0005789
"endoplasmic reticulum membrane" evidence=IDA] [GO:0071458
"integral to cytosolic side of endoplasmic reticulum membrane"
evidence=IDA] [GO:0071782 "endoplasmic reticulum tubular network"
evidence=IDA] [GO:0071786 "endoplasmic reticulum tubular network
organization" evidence=IMP] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0010286 "heat acclimation" evidence=RCA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005886
GO:GO:0005794 EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL096882
EMBL:AL161531 GO:GO:0071458 PANTHER:PTHR10994 GO:GO:0071786
eggNOG:NOG303514 HOGENOM:HOG000237479 ProtClustDB:CLSN2685988
GO:GO:0071782 EMBL:AY034901 EMBL:AY048273 EMBL:AY057606
EMBL:BT002368 EMBL:AY086294 IPI:IPI00525362 PIR:T13013
RefSeq:NP_192861.1 UniGene:At.3649 ProteinModelPortal:Q9SUT9
SMR:Q9SUT9 IntAct:Q9SUT9 STRING:Q9SUT9 PaxDb:Q9SUT9 PRIDE:Q9SUT9
EnsemblPlants:AT4G11220.1 GeneID:826724 KEGG:ath:AT4G11220
TAIR:At4g11220 InParanoid:Q9SUT9 OMA:FANLRQI PhylomeDB:Q9SUT9
Genevestigator:Q9SUT9 Uniprot:Q9SUT9
Length = 271
Score = 367 (134.2 bits), Expect = 9.5e-34, P = 9.5e-34
Identities = 67/191 (35%), Positives = 105/191 (54%)
Query: 45 RLFGRQKPVHHLLGGGKSADVLLWRNKKISASVLMGATAIWVLFEWLNYHFLTIVCFALV 104
RLFGR++PVH +LGGGK AD+ +W++KK+S V GAT WVLFE + YH LT++C ++
Sbjct: 68 RLFGRERPVHKVLGGGKPADIFMWKDKKMSGGVFGGATVAWVLFELMEYHLLTLLCHVMI 127
Query: 105 LGMLAQFFWVNISGLFNRSPSKVPRFVLPPEVFANIGTTVCANVNEALGLLQDISCGGKL 164
+ + F W N + ++SP K+P +P E + + + +N + L++I+ G +
Sbjct: 128 VALAVLFLWSNATMFIHKSPPKIPEVHIPEEPLLQLASGLRIEINRGISSLREIASGRDI 187
Query: 165 KQXXXXXXXXXXXXXIGSWCNLLTVLYIGFVAAHTLPVLYEKHEDKVDSXXXXXXXXXXX 224
K+ +G + LT+ YI V T+P+ Y+K+EDKVDS
Sbjct: 188 KKFLSAIAGLWVLSILGGCYSFLTLAYIALVLLFTVPLFYDKYEDKVDSYGEKAMAELKK 247
Query: 225 XYKKLDSGFLS 235
Y LD+ S
Sbjct: 248 QYAVLDAKVFS 258
>TAIR|locus:2089663 [details] [associations]
symbol:AT3G18260 "AT3G18260" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0005783 "endoplasmic reticulum"
evidence=IEA;ISS] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0016021
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005789
PANTHER:PTHR10994 HOGENOM:HOG000237479 EMBL:AP000414 EMBL:BT024845
EMBL:AY087239 IPI:IPI00546437 RefSeq:NP_566604.1 UniGene:At.38585
ProteinModelPortal:Q9LJQ5 PRIDE:Q9LJQ5 EnsemblPlants:AT3G18260.1
GeneID:821354 KEGG:ath:AT3G18260 TAIR:At3g18260 eggNOG:NOG309784
InParanoid:Q9LJQ5 OMA:CSFTTLL PhylomeDB:Q9LJQ5
ProtClustDB:CLSN2688524 Genevestigator:Q9LJQ5 Uniprot:Q9LJQ5
Length = 225
Score = 343 (125.8 bits), Expect = 3.3e-31, P = 3.3e-31
Identities = 67/191 (35%), Positives = 102/191 (53%)
Query: 45 RLFGRQKPVHHLLGGGKSADVLLWRNKKISASVLMGATAIWVLFEWLNYHFLTIVCFALV 104
+LF RQ+ +H + GGGK AD+LLWR KI+A++++G + +W L E + Y+F+T++C A +
Sbjct: 22 KLFTRQRSIHSIFGGGKVADILLWREPKIAATLVIGVSILWFLMEVVEYNFITLICHASM 81
Query: 105 LGMLAQFFWVNISGLFNRSPSKVPRFVLPPEVFANIGTTVCANVNEALGLLQDISCGGKL 164
ML F W S N +P VL F + + N+ L L D++CG
Sbjct: 82 TSMLFFFIWSTASDFLNWERPLIPEVVLDESSFKQLARSFHVRFNQILTKLLDVACGRDP 141
Query: 165 KQXXXXXXXXXXXXXIGSWCNLLTVLYIGFVAAHTLPVLYEKHEDKVDSXXXXXXXXXXX 224
IG++ N + +L+IGFV+ TLPV+YE +ED VD+
Sbjct: 142 PLFFLTTISLYIVSIIGTYFNFVNLLFIGFVSMQTLPVMYEMYEDDVDTAAGKLMRKMKK 201
Query: 225 XYKKLDSGFLS 235
YKK+D+ LS
Sbjct: 202 LYKKVDTNVLS 212
>TAIR|locus:2082772 [details] [associations]
symbol:AT3G61560 species:3702 "Arabidopsis thaliana"
[GO:0005783 "endoplasmic reticulum" evidence=IEA;ISS] [GO:0008150
"biological_process" evidence=ND] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0009506 "plasmodesma" evidence=IDA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
GO:GO:0005886 GO:GO:0009506 EMBL:CP002686 PANTHER:PTHR10994
IPI:IPI00540028 RefSeq:NP_001030913.1 UniGene:At.34268 PRIDE:F4JFD4
EnsemblPlants:AT3G61560.2 GeneID:825329 KEGG:ath:AT3G61560
Uniprot:F4JFD4
Length = 264
Score = 247 (92.0 bits), Expect = 4.7e-29, Sum P(2) = 4.7e-29
Identities = 51/116 (43%), Positives = 67/116 (57%)
Query: 12 DNLVETISDKVQKQKXXXXXXXXXX-----XXXXXRFNRLFGRQKPVHHLLGGGKSADVL 66
++L+E I+DK+ + RLFGR+KPVH +LGGG ADV
Sbjct: 13 ESLMEKIADKIHDHDSSSSSDSEHEKPESPSALKAKIYRLFGREKPVHKVLGGGLPADVF 72
Query: 67 LWRNKKISASVLMGATAIWVLFEWLNYHFLTIVCFALVLGMLAQFFWVNISGLFNR 122
LWR+KK+SASVL ATAIWVLFE + YHFL++VC L+ + A F N N+
Sbjct: 73 LWRDKKLSASVLGVATAIWVLFELVEYHFLSLVCHILIFALAALFLLSNAHAFMNK 128
Score = 91 (37.1 bits), Expect = 4.7e-29, Sum P(2) = 4.7e-29
Identities = 21/50 (42%), Positives = 25/50 (50%)
Query: 186 LLTVLYIGFVAAHTLPVLYEKHEDKVDSXXXXXXXXXXXXYKKLDSGFLS 235
L+ +L FV HT+P+LYEKHEDKVD Y D LS
Sbjct: 203 LVQLLDSCFVVLHTVPMLYEKHEDKVDPVAEKTLKELKKHYMVFDEKVLS 252
>TAIR|locus:1005716554 [details] [associations]
symbol:AT3G10915 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0005783 "endoplasmic
reticulum" evidence=IEA;ISS] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845
GO:GO:0005783 EMBL:CP002686 PANTHER:PTHR10994 IPI:IPI00938902
RefSeq:NP_001154603.1 UniGene:At.44168 ProteinModelPortal:F4J500
EnsemblPlants:AT3G10915.5 GeneID:820262 KEGG:ath:AT3G10915
OMA:HDITLGK Uniprot:F4J500
Length = 249
Score = 215 (80.7 bits), Expect = 2.9e-22, Sum P(2) = 2.9e-22
Identities = 48/175 (27%), Positives = 84/175 (48%)
Query: 62 SADVLLWRNKKISASVLMGATAIWVLFEWLNYHFLTIVCFALVLGMLAQFFWVNISGLFN 121
+AD+LLWR + +S V++ +T W++FE+ FL++ L++ ++ F +S N
Sbjct: 63 AADLLLWRRRHLSLGVIIISTVAWLIFEFSGLPFLSVSSDVLLIVIMISFVHARVSAFRN 122
Query: 122 RSPSKVPRFVLPPEVFANIGTTVCANVNEALGLLQDISCGGKLKQXXXXXXXXX-XXXXI 180
R +P VL E+ + + +N L + D++ G + I
Sbjct: 123 RQLHSLPELVLSEEMVNSAAASFRIKLNHLLVMAHDVTVGNDFRLFFKQVVICLWLLSAI 182
Query: 181 GSWCNLLTVLYIGFVAAHTLPVLYEKHEDKVDSXXXXXXXXXXXXYKKLDSGFLS 235
GS+ +L T+LYIG + + T+P LY K++ KVD YK +D +S
Sbjct: 183 GSYISLCTLLYIGTILSVTIPALYSKYQSKVDKCCGTIHRRLSHHYKIVDENVIS 237
Score = 58 (25.5 bits), Expect = 2.9e-22, Sum P(2) = 2.9e-22
Identities = 11/17 (64%), Positives = 12/17 (70%)
Query: 45 RLFGRQKPVHHLLGGGK 61
RL GRQ VH +GGGK
Sbjct: 24 RLLGRQITVHQFMGGGK 40
>TAIR|locus:2049077 [details] [associations]
symbol:AT2G15280 "AT2G15280" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0005783 "endoplasmic reticulum"
evidence=IEA;ISS] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0016021
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005789 EMBL:AC007267
PANTHER:PTHR10994 HOGENOM:HOG000237479 EMBL:BX821446 EMBL:BT010716
EMBL:BT010986 IPI:IPI00533223 IPI:IPI00548624 PIR:A84527
RefSeq:NP_179130.2 RefSeq:NP_973467.1 UniGene:At.22376
UniGene:At.40435 ProteinModelPortal:Q6NPD8
EnsemblPlants:AT2G15280.1 GeneID:816017 KEGG:ath:AT2G15280
TAIR:At2g15280 eggNOG:NOG300173 InParanoid:Q6NPD8 OMA:VAREIYV
PhylomeDB:Q6NPD8 ProtClustDB:CLSN2690715 Genevestigator:Q6NPD8
Uniprot:Q6NPD8
Length = 201
Score = 241 (89.9 bits), Expect = 2.1e-20, P = 2.1e-20
Identities = 50/186 (26%), Positives = 89/186 (47%)
Query: 50 QKPVHHLLGGGKSADVLLWRNKKISASVLMGATAI-WVLFEWLNYHFLTIVCFALVLGML 108
++ VH + G AD+++W+N++ +L+G+T + W LFE Y F V +L ++
Sbjct: 2 EESVHQSIRFGSVADLIMWKNRR-GGFLLLGSTTLLWFLFEKCGYSFFPFVVNTQLLSVV 60
Query: 109 AQFFWVNISGLFNRSPSKVPRFVLPPEVFANIGTTVCANVNEALGLLQDISCGGKLKQXX 168
F W + LFNR ++P + E + + +N L + ++I G KQ
Sbjct: 61 ILFLWAKSAILFNRPMPQLPNLEITEEFVFMVADAIRVWINTVLAVAREIYVGRNAKQLF 120
Query: 169 XXXXXXXXXXXIGSWCNLLTVLYIGFVAAHTLPVLYEKHEDKVDSXXXXXXXXXXXXYKK 228
+G++ N LT+LY+G V + +P LYE+++D +D Y+K
Sbjct: 121 RVSVVLWTVSFVGNFLNFLTILYLGVVLSLLIPFLYERYQDLIDEKLSLTHRVIQTQYRK 180
Query: 229 LDSGFL 234
+D L
Sbjct: 181 IDERLL 186
>TAIR|locus:2080315 [details] [associations]
symbol:AT3G54120 "AT3G54120" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005783
"endoplasmic reticulum" evidence=IEA;ISS] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR003388 Pfam:PF02453
PROSITE:PS50845 GO:GO:0016021 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005789 EMBL:AL132957
PANTHER:PTHR10994 UniGene:At.25009 UniGene:At.68442
HOGENOM:HOG000237479 EMBL:BT010698 EMBL:BT010978 EMBL:AK229371
IPI:IPI00519528 PIR:T47571 RefSeq:NP_190980.1
ProteinModelPortal:Q9M392 IntAct:Q9M392 EnsemblPlants:AT3G54120.1
GeneID:824579 KEGG:ath:AT3G54120 TAIR:At3g54120 eggNOG:NOG256441
InParanoid:Q9M392 OMA:LWAKAAR PhylomeDB:Q9M392
ProtClustDB:CLSN2685077 Genevestigator:Q9M392 Uniprot:Q9M392
Length = 203
Score = 218 (81.8 bits), Expect = 5.8e-18, P = 5.8e-18
Identities = 45/168 (26%), Positives = 79/168 (47%)
Query: 44 NRLFGRQKPVHHLLGGGKSADVLLWRNKKISASVLMGATAIWVLFEWLNYHFLTIVCFAL 103
++LF R + +H +LGGG ADV+LWR K +S ++ A W++FE Y T++ L
Sbjct: 6 DKLFNRDRTIHEILGGGIVADVMLWRKKNVSVGIVTVTIASWMVFEAFAYTIFTLISSVL 65
Query: 104 VLGMLAQFFWVNISGLFNRSPSKVPRFVLPPEVFANIGTTVCANVNEALGLLQDISCGGK 163
+L + F W + + NR +P F + + + +VN+ L + DI+
Sbjct: 66 LLLLSILFLWSKSASILNRPSPPLPEFQISEAMAEEASIWLRIHVNKLLQVSHDIAMARD 125
Query: 164 LKQXXXXXXXXXXXXXIGSWCNLLTVLYIGFVAAHTLPVLYEKHEDKV 211
+ IGS + T+ + + T+P YE++ED +
Sbjct: 126 SELYTKVAVSLFLLSLIGSLMDFQTLCHTSVLVVMTVPAFYERYEDYI 173
>TAIR|locus:2090609 [details] [associations]
symbol:AT3G19460 "AT3G19460" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005783
"endoplasmic reticulum" evidence=IEA;ISS] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR003388 Pfam:PF02453
PROSITE:PS50845 GO:GO:0005783 EMBL:CP002686 EMBL:AB025624
PANTHER:PTHR10994 HOGENOM:HOG000237479 IPI:IPI00846973
RefSeq:NP_001078186.1 UniGene:At.38403 ProteinModelPortal:A8MR23
PRIDE:A8MR23 EnsemblPlants:AT3G19460.2 GeneID:821480
KEGG:ath:AT3G19460 OMA:RHINTIV ProtClustDB:CLSN2688563
Genevestigator:A8MR23 Uniprot:A8MR23
Length = 218
Score = 138 (53.6 bits), Expect = 4.7e-15, Sum P(2) = 4.7e-15
Identities = 33/98 (33%), Positives = 50/98 (51%)
Query: 63 ADVLLWRNKKISASVLMGATAIWVLFEWLNYHFLTIVCFALVLGMLAQFFWVNISGLFNR 122
AD+LLWRN+ + +L+ +T W LFE Y+ L+ V L+L + F W + + NR
Sbjct: 7 ADLLLWRNRTGAVILLISSTGFWFLFERAGYNLLSFVSNVLLLLVAIFFLWAKSATVLNR 66
Query: 123 SPSKVPRFVLPPEVFAN-IGTTVCANVNEALGLLQDIS 159
VP +P E FAN + +N L + DI+
Sbjct: 67 PLPPVPNMEIPEE-FANKAADDLRVWINYVLSIASDIT 103
Score = 83 (34.3 bits), Expect = 4.7e-15, Sum P(2) = 4.7e-15
Identities = 13/33 (39%), Positives = 25/33 (75%)
Query: 180 IGSWCNLLTVLYIGFVAAHTLPVLYEKHEDKVD 212
+G+ N LT++YIG + + + P++YEK++D +D
Sbjct: 158 VGTLINSLTLVYIGVLLSLSFPIVYEKYQDHID 190
>TAIR|locus:2046783 [details] [associations]
symbol:RTNLB13 "AT2G23640" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0005783 "endoplasmic reticulum"
evidence=IEA;ISS] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IDA] [GO:0071458 "integral to cytosolic side of
endoplasmic reticulum membrane" evidence=IDA] [GO:0071782
"endoplasmic reticulum tubular network" evidence=IDA] [GO:0071786
"endoplasmic reticulum tubular network organization" evidence=IMP]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 EMBL:AC003040
EMBL:CP002685 GenomeReviews:CT485783_GR EMBL:AC004482 GO:GO:0071458
PANTHER:PTHR10994 GO:GO:0071786 GO:GO:0071782 EMBL:BX822075
IPI:IPI00527827 PIR:T01153 RefSeq:NP_565555.1 UniGene:At.50091
ProteinModelPortal:O64837 STRING:O64837 PaxDb:O64837 PRIDE:O64837
EnsemblPlants:AT2G23640.1 GeneID:816896 KEGG:ath:AT2G23640
TAIR:At2g23640 eggNOG:NOG307342 HOGENOM:HOG000154223
InParanoid:O64837 OMA:WMFRVGA PhylomeDB:O64837
ProtClustDB:CLSN2688372 Genevestigator:O64837 Uniprot:O64837
Length = 206
Score = 119 (46.9 bits), Expect = 8.4e-06, P = 8.4e-06
Identities = 31/148 (20%), Positives = 66/148 (44%)
Query: 64 DVLLWRNKKISASVLMGATAIWVLFEWLNYHFLTIVCFALVLGMLAQFFWVNISGLFNRS 123
D+ LWR KK++ S L+ +T+ W+L + + +TIV + + + F W ++ L ++
Sbjct: 18 DIYLWRRKKLAFSTLLVSTSTWILLSFYGFTTITIVSWIGIAVVSMIFLWGSLLRLLSKV 77
Query: 124 PSKVPRFVLPPEVFANIGTTVCANVNEALGLLQDISCGGKLKQXXXXXXXXXXXXXIGSW 183
++ + E + + E + + + + IG+
Sbjct: 78 EPELSGLEVSEEFVVETVRSCRMLMEEMVRWMFRVGAESEWFVFARTVLGFWILSRIGNL 137
Query: 184 CNLLTVLYIGFVAAHTLPVLYEKHEDKV 211
+ T L+IG V T+P L+E++ D++
Sbjct: 138 LDFHTCLFIGLVMGLTVPKLWEEYGDQI 165
>ZFIN|ZDB-GENE-060420-1 [details] [associations]
symbol:rtn2a "reticulon 2a" species:7955 "Danio
rerio" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR003388 Pfam:PF02453
PROSITE:PS50845 ZFIN:ZDB-GENE-060420-1 GO:GO:0005783
PANTHER:PTHR10994 HOVERGEN:HBG000838 GeneTree:ENSGT00390000009934
HOGENOM:HOG000015254 EMBL:CR925772 EMBL:BC115054 EMBL:AY576807
IPI:IPI00775060 RefSeq:NP_001025136.1 UniGene:Dr.45249
Ensembl:ENSDART00000124998 GeneID:569502 KEGG:dre:569502 CTD:569502
eggNOG:NOG260892 InParanoid:Q4G5K8 OMA:LFQLSII OrthoDB:EOG4NCMDZ
NextBio:20889711 Uniprot:Q4G5K8
Length = 203
Score = 98 (39.6 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 21/63 (33%), Positives = 34/63 (53%)
Query: 151 ALGLLQDISCGGKLKQXXXXXXXXXXXXXIGSWCNLLTVLYIGFVAAHTLPVLYEKHEDK 210
AL L+++ G L +G+ CN LT++ IG +A ++P+ Y +H+DK
Sbjct: 102 ALETLRNLIFVGNLFSSLKFWLLMYVVTFLGNLCNGLTLIIIGVIAVFSVPLFYTRHQDK 161
Query: 211 VDS 213
VDS
Sbjct: 162 VDS 164
Score = 40 (19.1 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 13/49 (26%), Positives = 25/49 (51%)
Query: 61 KSADVLLWRNKKISASVLMG-ATAIWVLFEW-----LNYHFLTIVCFAL 103
K D++ W++ + + VL G A+ LF+ ++ L I+CF +
Sbjct: 4 KVMDLVYWKDMERTGMVLTGLVVALLSLFQLSIITVVSTLSLAILCFTI 52
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.324 0.139 0.431 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 248 197 0.00082 111 3 11 22 0.42 32
31 0.44 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 12
No. of states in DFA: 610 (65 KB)
Total size of DFA: 174 KB (2101 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 15.21u 0.17s 15.38t Elapsed: 00:00:01
Total cpu time: 15.21u 0.17s 15.38t Elapsed: 00:00:01
Start: Sat May 11 01:59:47 2013 End: Sat May 11 01:59:48 2013