BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025777
(248 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|449469371|ref|XP_004152394.1| PREDICTED: 3-isopropylmalate dehydratase small subunit-like
[Cucumis sativus]
gi|449525429|ref|XP_004169720.1| PREDICTED: 3-isopropylmalate dehydratase small subunit-like
[Cucumis sativus]
Length = 248
Score = 339 bits (869), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 166/219 (75%), Positives = 185/219 (84%), Gaps = 2/219 (0%)
Query: 30 HSLKFTTGNGRAAVTFQRAVSVIP-KATSADSRATKEPTAT-FHGLCYVVGDNIDTDQII 87
+LKF + + AVS P + + RAT P++T FHGLCYVVGDNIDTDQII
Sbjct: 30 QTLKFRSSHSNFLFNLSIAVSHAPSRLATIIPRATASPSSTAFHGLCYVVGDNIDTDQII 89
Query: 88 PAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKIIIAGGNFGCGSSRE 147
PAEYLTLVPSNP EYEKLGSYALIGLP++Y+TR+++ E KTKY IIIAG NFGCGSSRE
Sbjct: 90 PAEYLTLVPSNPSEYEKLGSYALIGLPSSYSTRYVESEEMKTKYSIIIAGDNFGCGSSRE 149
Query: 148 HAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEECSTGDVVTIEIAESR 207
HAPVALGA+G AVVAESYARIFFRNSVATGEIYPL+SE R+CEEC TGDVVTIE+AESR
Sbjct: 150 HAPVALGASGAVAVVAESYARIFFRNSVATGEIYPLESETRICEECKTGDVVTIELAESR 209
Query: 208 LINHTTGKEYKLKPIGDLGPVIDAGGIFAYARKTGMIAS 246
LINHTTGKEYKLKPIGD GPVI+AGGIFAYARKTGMI+S
Sbjct: 210 LINHTTGKEYKLKPIGDAGPVIEAGGIFAYARKTGMISS 248
>gi|388498356|gb|AFK37244.1| unknown [Lotus japonicus]
Length = 250
Score = 314 bits (805), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 154/178 (86%), Positives = 166/178 (93%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEY+KLGSYALIGLPA+Y RF+ ETKT
Sbjct: 73 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYQKLGSYALIGLPASYPARFVQPGETKT 132
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
KY ++IAG NFGCGSSREHAPVALGA+G +AVVAESYARIFFRNSVATGE+YPL+SE RL
Sbjct: 133 KYSVLIAGANFGCGSSREHAPVALGASGAAAVVAESYARIFFRNSVATGEVYPLESEGRL 192
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLGPVIDAGGIFAYARKTGMIASR 247
CEECSTGDVVTIE+AESRLINHTTGKEY LKPIGD GPVI+AGGIFAYARKTGMI +R
Sbjct: 193 CEECSTGDVVTIELAESRLINHTTGKEYSLKPIGDAGPVIEAGGIFAYARKTGMIPTR 250
>gi|356519371|ref|XP_003528346.1| PREDICTED: 3-isopropylmalate dehydratase small subunit-like
[Glycine max]
Length = 246
Score = 314 bits (805), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 154/178 (86%), Positives = 165/178 (92%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
FHGLCYVVGDNIDTDQIIPAEYLTLVPS PDEYEKLGSYAL+GLPATY RF+D ETKT
Sbjct: 69 FHGLCYVVGDNIDTDQIIPAEYLTLVPSKPDEYEKLGSYALVGLPATYAARFVDPGETKT 128
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
KY I+I G NFGCGSSREHAPVALGA+G +AVVAESYARIFFRNSVATGE+YPL+SE RL
Sbjct: 129 KYSIVIGGANFGCGSSREHAPVALGASGAAAVVAESYARIFFRNSVATGEVYPLESEGRL 188
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLGPVIDAGGIFAYARKTGMIASR 247
CEEC+TGDVVTIE+ ESRLINHTTGKEY+LKPIGD GPVI+AGGIFAYARKTGMI SR
Sbjct: 189 CEECTTGDVVTIELGESRLINHTTGKEYRLKPIGDAGPVIEAGGIFAYARKTGMIPSR 246
>gi|356526195|ref|XP_003531705.1| PREDICTED: 3-isopropylmalate dehydratase small subunit-like
[Glycine max]
Length = 245
Score = 313 bits (802), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 155/178 (87%), Positives = 165/178 (92%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
FHGLCYVVGDNIDTDQIIPAEYLTLVPS PDEYEKLGSYALIGLPATY TRFI+ E KT
Sbjct: 68 FHGLCYVVGDNIDTDQIIPAEYLTLVPSKPDEYEKLGSYALIGLPATYATRFIEPGEIKT 127
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
KY I+I G NFGCGSSREHAPVALGA+G +AVVAESYARIFFRNSVATGE+YPL+SE RL
Sbjct: 128 KYAIVIGGANFGCGSSREHAPVALGASGAAAVVAESYARIFFRNSVATGEVYPLESEGRL 187
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLGPVIDAGGIFAYARKTGMIASR 247
CEEC+TGDVVTIE+ ESRLINHTTGKEY+LKPIGD GPVI+AGGIFAYARKTGMI SR
Sbjct: 188 CEECTTGDVVTIELGESRLINHTTGKEYRLKPIGDAGPVIEAGGIFAYARKTGMIPSR 245
>gi|388521689|gb|AFK48906.1| unknown [Medicago truncatula]
Length = 248
Score = 305 bits (781), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 150/196 (76%), Positives = 171/196 (87%)
Query: 52 IPKATSADSRATKEPTATFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALI 111
I +A + S T +FHGLCYVVGDNIDTDQIIPAE+LTLVPSNPDEY+KLGS+ALI
Sbjct: 53 ITRAHAPPSPVTTTAATSFHGLCYVVGDNIDTDQIIPAEHLTLVPSNPDEYQKLGSFALI 112
Query: 112 GLPATYTTRFIDENETKTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFF 171
GLP +Y+ RF++ ETKTKY III G NFGCGSSREHAPVALGA+G +AVVAESYA+IFF
Sbjct: 113 GLPDSYSVRFVESGETKTKYSIIIGGANFGCGSSREHAPVALGASGAAAVVAESYAKIFF 172
Query: 172 RNSVATGEIYPLDSEARLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLGPVIDA 231
RNSVATGE+YPL+SE RLCEEC TGDVVT+E+ E+RLINH TGKEY+LKPIGD GPVI+A
Sbjct: 173 RNSVATGEVYPLESETRLCEECRTGDVVTVELEENRLINHRTGKEYQLKPIGDAGPVIEA 232
Query: 232 GGIFAYARKTGMIASR 247
GGIFAYARKTGMI +R
Sbjct: 233 GGIFAYARKTGMIPTR 248
>gi|255579643|ref|XP_002530662.1| 3-isopropylmalate dehydratase, putative [Ricinus communis]
gi|223529795|gb|EEF31731.1| 3-isopropylmalate dehydratase, putative [Ricinus communis]
Length = 254
Score = 304 bits (779), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 154/180 (85%), Positives = 167/180 (92%)
Query: 69 TFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETK 128
TFHGLCYVVGDNIDTDQIIPAEYLTLVPSNP EYEKLGSYALIGLPA+Y TRF++ NE K
Sbjct: 74 TFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPAEYEKLGSYALIGLPASYKTRFMEPNEMK 133
Query: 129 TKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEAR 188
TKY I+I G NFGCGSSREHAPVALGAAG +AVVAESYARIFFRNSVATGEIYPL++E R
Sbjct: 134 TKYTIVIGGDNFGCGSSREHAPVALGAAGVAAVVAESYARIFFRNSVATGEIYPLETEVR 193
Query: 189 LCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLGPVIDAGGIFAYARKTGMIASRN 248
+CEEC TGDVVTIE+AE+RLINHTTGKEYKLKPIGD GPVI+AGGIFAYAR TGMI S++
Sbjct: 194 ICEECKTGDVVTIELAENRLINHTTGKEYKLKPIGDAGPVIEAGGIFAYARSTGMIPSQS 253
>gi|116781026|gb|ABK21932.1| unknown [Picea sitchensis]
Length = 291
Score = 300 bits (769), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 146/196 (74%), Positives = 166/196 (84%), Gaps = 3/196 (1%)
Query: 53 PKATSADS-RATKEPTAT-FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYAL 110
P+A ++ S A EP FHG C+VV DNIDTDQIIPAEYLTLVPS PDEYEKLGSYA+
Sbjct: 94 PRAVASQSYDALTEPNKKIFHGKCFVVDDNIDTDQIIPAEYLTLVPSKPDEYEKLGSYAM 153
Query: 111 IGLPATYTTRFIDENETKTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIF 170
IGL A Y RFI++++ KT+Y I+IAG NFGCGSSREHAPVALGAAG AVVAE YARIF
Sbjct: 154 IGLNAKYG-RFIEDDQIKTQYPIVIAGANFGCGSSREHAPVALGAAGVKAVVAEYYARIF 212
Query: 171 FRNSVATGEIYPLDSEARLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLGPVID 230
FRNSVATGEIYPL+SE R+C+EC TGD+VT+EI ++LINHTTGKEY LKPIGD GPVID
Sbjct: 213 FRNSVATGEIYPLESECRVCDECKTGDIVTVEIEGNKLINHTTGKEYVLKPIGDAGPVID 272
Query: 231 AGGIFAYARKTGMIAS 246
AGGIF YAR+TGMIA+
Sbjct: 273 AGGIFEYARRTGMIAA 288
>gi|224284423|gb|ACN39946.1| unknown [Picea sitchensis]
Length = 265
Score = 300 bits (767), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 146/196 (74%), Positives = 166/196 (84%), Gaps = 3/196 (1%)
Query: 53 PKATSADS-RATKEPTAT-FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYAL 110
P+A ++ S A EP FHG C+VV DNIDTDQIIPAEYLTLVPS PDEYEKLGSYA+
Sbjct: 68 PRAVASQSYDALTEPNKKIFHGKCFVVDDNIDTDQIIPAEYLTLVPSKPDEYEKLGSYAM 127
Query: 111 IGLPATYTTRFIDENETKTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIF 170
IGL A Y RFI++++ KT+Y I+IAG NFGCGSSREHAPVALGAAG AVVAE YARIF
Sbjct: 128 IGLNAKYG-RFIEDDQIKTQYPIVIAGANFGCGSSREHAPVALGAAGVKAVVAEYYARIF 186
Query: 171 FRNSVATGEIYPLDSEARLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLGPVID 230
FRNSVATGEIYPL+SE R+C+EC TGD+VT+EI ++LINHTTGKEY LKPIGD GPVID
Sbjct: 187 FRNSVATGEIYPLESECRVCDECKTGDIVTVEIEGNKLINHTTGKEYVLKPIGDAGPVID 246
Query: 231 AGGIFAYARKTGMIAS 246
AGGIF YAR+TGMIA+
Sbjct: 247 AGGIFEYARRTGMIAA 262
>gi|225469374|ref|XP_002263405.1| PREDICTED: 3-isopropylmalate dehydratase small subunit [Vitis
vinifera]
gi|147767013|emb|CAN65399.1| hypothetical protein VITISV_034682 [Vitis vinifera]
Length = 253
Score = 299 bits (766), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 146/178 (82%), Positives = 163/178 (91%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
FHGLCYVV DNIDTDQIIPAEYLTLVPSNPDEY+KLGSYA IGLP++Y TRFI+ E KT
Sbjct: 74 FHGLCYVVHDNIDTDQIIPAEYLTLVPSNPDEYQKLGSYAFIGLPSSYETRFIEAGELKT 133
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
KY I+IAG NFGCGSSREHAPVALGAAG AVVAESYARIFFRNSV+TGE+YPL++E R+
Sbjct: 134 KYTIVIAGQNFGCGSSREHAPVALGAAGARAVVAESYARIFFRNSVSTGEVYPLETEVRI 193
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLGPVIDAGGIFAYARKTGMIASR 247
CEEC TGDVVTIE+ ES+LINHTTGKEYKL P+GD+GPVI+AGGIFAYARKTGMI ++
Sbjct: 194 CEECRTGDVVTIELGESKLINHTTGKEYKLNPVGDVGPVIEAGGIFAYARKTGMIPAQ 251
>gi|193290702|gb|ACF17659.1| putative 3-isopropylmalate dehydrogenase small subunit [Capsicum
annuum]
Length = 252
Score = 296 bits (759), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 149/193 (77%), Positives = 170/193 (88%)
Query: 54 KATSADSRATKEPTATFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGL 113
++ +A + T + TFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEY+KLGSYAL GL
Sbjct: 60 RSAAAAAPETTNSSTTFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYKKLGSYALCGL 119
Query: 114 PATYTTRFIDENETKTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRN 173
P++Y TRF++ E +KY I+I G NFGCGSSREHAPVALGAAG +AVVAESYARIFFRN
Sbjct: 120 PSSYPTRFVEPGEFTSKYSIVIGGDNFGCGSSREHAPVALGAAGVAAVVAESYARIFFRN 179
Query: 174 SVATGEIYPLDSEARLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLGPVIDAGG 233
SV+TGE+YPL+SE R+CEEC TGDVVT+E ESRLINHTTGKEYKLKPIGD GPVI+AGG
Sbjct: 180 SVSTGEVYPLESEVRICEECKTGDVVTVEFGESRLINHTTGKEYKLKPIGDAGPVIEAGG 239
Query: 234 IFAYARKTGMIAS 246
IFAYARKTGMI++
Sbjct: 240 IFAYARKTGMISN 252
>gi|15224221|ref|NP_181837.1| Aconitase/3-isopropylmalate dehydratase protein [Arabidopsis
thaliana]
gi|3763918|gb|AAC64298.1| 3-isopropylmalate dehydratase, small subunit [Arabidopsis thaliana]
gi|14334970|gb|AAK59662.1| putative 3-isopropylmalate dehydratase, small subunit [Arabidopsis
thaliana]
gi|17104629|gb|AAL34203.1| putative 3-isopropylmalate dehydratase, small subunit [Arabidopsis
thaliana]
gi|20197634|gb|AAM15163.1| 3-isopropylmalate dehydratase, small subunit [Arabidopsis thaliana]
gi|21592696|gb|AAM64645.1| 3-isopropylmalate dehydratase, small subunit [Arabidopsis thaliana]
gi|330255113|gb|AEC10207.1| Aconitase/3-isopropylmalate dehydratase protein [Arabidopsis
thaliana]
Length = 251
Score = 296 bits (758), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 150/191 (78%), Positives = 164/191 (85%), Gaps = 4/191 (2%)
Query: 60 SRATKEPT--ATFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATY 117
+R+ EP TFHGLCYVVGDNIDTDQIIPAE+LTLVPSNP+EYEKLGSYAL+GLPA+Y
Sbjct: 58 TRSAAEPQERKTFHGLCYVVGDNIDTDQIIPAEFLTLVPSNPEEYEKLGSYALVGLPASY 117
Query: 118 TTRFIDENETKTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVAT 177
RF+ E KTKY III G NFGCGSSREHAPV LGAAG AVVA+SYARIFFRNSVAT
Sbjct: 118 KERFVQPGEMKTKYSIIIGGENFGCGSSREHAPVCLGAAGAKAVVAQSYARIFFRNSVAT 177
Query: 178 GEIYPLDSEARLCEECSTGDVVTIEIAE--SRLINHTTGKEYKLKPIGDLGPVIDAGGIF 235
GE+YPLDSE R+C+EC+TGDV T+E+ E S LINHTTGKEYKLKPIGD GPVIDAGGIF
Sbjct: 178 GEVYPLDSEVRVCDECTTGDVATVELREGDSILINHTTGKEYKLKPIGDAGPVIDAGGIF 237
Query: 236 AYARKTGMIAS 246
AYARK GMI S
Sbjct: 238 AYARKAGMIPS 248
>gi|297824281|ref|XP_002880023.1| aconitase C-terminal domain-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325862|gb|EFH56282.1| aconitase C-terminal domain-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 251
Score = 296 bits (758), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 156/230 (67%), Positives = 175/230 (76%), Gaps = 4/230 (1%)
Query: 21 PKTKPLFIPHSLKFTTGNGRAAVTFQRAVSVIPKATSADSRATKEPT--ATFHGLCYVVG 78
P P F F N + + + + ++S +R+ EP TFHGLCYVVG
Sbjct: 19 PNKSPSFATFRSPFLRFNSTSVASNFKPLVSREASSSFVTRSAAEPQERKTFHGLCYVVG 78
Query: 79 DNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKIIIAGG 138
DNIDTDQIIPAE+LTLVPSNP+EYEKLGSYAL+GLPA+Y RF+ E KTKY III G
Sbjct: 79 DNIDTDQIIPAEFLTLVPSNPEEYEKLGSYALVGLPASYKERFVQPGEMKTKYSIIIGGE 138
Query: 139 NFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEECSTGDV 198
NFGCGSSREHAPV LGAAG AVVA+SYARIFFRNSVATGE+YPLDSE R+C+EC TGDV
Sbjct: 139 NFGCGSSREHAPVCLGAAGAKAVVAQSYARIFFRNSVATGEVYPLDSEVRVCDECKTGDV 198
Query: 199 VTIEIAE--SRLINHTTGKEYKLKPIGDLGPVIDAGGIFAYARKTGMIAS 246
T+E+ E S LINHTTGKEYKLKPIGD GPVIDAGGIFAYARK GMI S
Sbjct: 199 ATVELREGDSILINHTTGKEYKLKPIGDAGPVIDAGGIFAYARKAGMIPS 248
>gi|118489311|gb|ABK96460.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 255
Score = 293 bits (751), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 151/179 (84%), Positives = 166/179 (92%)
Query: 69 TFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETK 128
+FHG CYVVGDNIDTDQIIPAEYLTLVPS +EYEKLGSYALIGLPATY TRFI+ N+TK
Sbjct: 75 SFHGHCYVVGDNIDTDQIIPAEYLTLVPSKQEEYEKLGSYALIGLPATYKTRFIEANQTK 134
Query: 129 TKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEAR 188
TKY I+I G NFGCGSSREHAPVALGAAG +AVVAESYARIFFRNSVATGEIYPL+SE R
Sbjct: 135 TKYSIVIGGENFGCGSSREHAPVALGAAGAAAVVAESYARIFFRNSVATGEIYPLESEVR 194
Query: 189 LCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLGPVIDAGGIFAYARKTGMIASR 247
+CEEC TGD++TIE+AES+LINHT+GKEYKLKPIGD GPVI+AGGIFAYARKTGMI S+
Sbjct: 195 ICEECKTGDLITIELAESKLINHTSGKEYKLKPIGDAGPVIEAGGIFAYARKTGMIPSQ 253
>gi|224071511|ref|XP_002303495.1| predicted protein [Populus trichocarpa]
gi|222840927|gb|EEE78474.1| predicted protein [Populus trichocarpa]
Length = 172
Score = 283 bits (725), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 147/172 (85%), Positives = 160/172 (93%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
FHG CYVVGDNIDTDQIIPAEYLTLVPS +EYEKLGSYALIGLPATY TRFI+ N+TKT
Sbjct: 1 FHGHCYVVGDNIDTDQIIPAEYLTLVPSKQEEYEKLGSYALIGLPATYKTRFIEANQTKT 60
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
KY I+I G NFGCGSSREHAPVALGAAG +AVVAESYARIFFRNSVATGEIYPL+SE R+
Sbjct: 61 KYSIVIGGENFGCGSSREHAPVALGAAGAAAVVAESYARIFFRNSVATGEIYPLESEVRI 120
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLGPVIDAGGIFAYARKT 241
CEEC TGD++TIE+AES+LINHT+GKEYKLKPIGD GPVI+AGGIFAYARKT
Sbjct: 121 CEECKTGDLITIELAESKLINHTSGKEYKLKPIGDAGPVIEAGGIFAYARKT 172
>gi|168006899|ref|XP_001756146.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692656|gb|EDQ79012.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 177
Score = 281 bits (718), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 130/177 (73%), Positives = 154/177 (87%), Gaps = 1/177 (0%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
HG C++VGDNIDTDQIIPAEYLTLVPS PDEYEKLGSYA+IGLP + +F+++ + KT
Sbjct: 2 IHGRCFIVGDNIDTDQIIPAEYLTLVPSKPDEYEKLGSYAMIGLPQEWG-KFVEDGKMKT 60
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
+YK+II G NFGCGSSREHAPVALGAAGC AVVAESYARIFFRNSVATGE+YP +++ ++
Sbjct: 61 EYKVIIGGANFGCGSSREHAPVALGAAGCRAVVAESYARIFFRNSVATGELYPCETQEKI 120
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLGPVIDAGGIFAYARKTGMIAS 246
EE TGD VT+++ + L+NHTTGK+Y LKPIG+ GPVIDAGGIFAYARKTGMIAS
Sbjct: 121 WEENHTGDYVTLDMEKDVLVNHTTGKQYNLKPIGEAGPVIDAGGIFAYARKTGMIAS 177
>gi|168012330|ref|XP_001758855.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689992|gb|EDQ76361.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 177
Score = 280 bits (717), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 130/178 (73%), Positives = 154/178 (86%), Gaps = 1/178 (0%)
Query: 69 TFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETK 128
HG C+VVGDNIDTDQIIPAEYLTLVPS P+EYEKLGSYA+IGLPA + +FI++ K
Sbjct: 1 VIHGKCFVVGDNIDTDQIIPAEYLTLVPSKPEEYEKLGSYAMIGLPAQWG-KFIEDGAMK 59
Query: 129 TKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEAR 188
T+YK+II GGNFGCGSSREHAPVALGAAGC AVVAESYARIFFRNSVATGE+YP+++ +
Sbjct: 60 TEYKVIIGGGNFGCGSSREHAPVALGAAGCRAVVAESYARIFFRNSVATGELYPVETNGK 119
Query: 189 LCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLGPVIDAGGIFAYARKTGMIAS 246
+ EE TGD+VT+++ L+NH+TGK+Y LKPIG+ GPVIDAGGIF+YAR TGMIAS
Sbjct: 120 IWEENHTGDIVTLDMDNDVLVNHSTGKQYHLKPIGEAGPVIDAGGIFSYARSTGMIAS 177
>gi|413938061|gb|AFW72612.1| 3-isopropylmalate dehydratase small subunit 2 isoform 1 [Zea mays]
gi|413938062|gb|AFW72613.1| 3-isopropylmalate dehydratase small subunit 2 isoform 2 [Zea mays]
gi|413938063|gb|AFW72614.1| 3-isopropylmalate dehydratase small subunit 2 isoform 3 [Zea mays]
Length = 249
Score = 275 bits (704), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 138/204 (67%), Positives = 165/204 (80%), Gaps = 2/204 (0%)
Query: 46 QRAVSVIPKATSADSRATKEPTATFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKL 105
+RA S++P A +A + ++ +A FHG C+VVGDNIDTDQIIPAE+LTLVPS PDEY KL
Sbjct: 43 RRAGSIVPAAAAAAAGSSSPSSAVFHGECFVVGDNIDTDQIIPAEHLTLVPSKPDEYRKL 102
Query: 106 GSYALIGLP-ATYTTRFIDENETKTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAE 164
GS+A GLP A Y T F+ E ++Y II+ G NFGCGSSREHAPVALGAAG A+VAE
Sbjct: 103 GSFAFAGLPSAAYPTPFVAPGEESSRYAIIVGGANFGCGSSREHAPVALGAAGARAIVAE 162
Query: 165 SYARIFFRNSVATGEIYPLD-SEARLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIG 223
YARIFFRNSVATGE+YPL+ ++ +EC TGDVVT+++A S INHT+GKEYKLKPIG
Sbjct: 163 GYARIFFRNSVATGEVYPLELTDVGAWKECKTGDVVTVDLANSVFINHTSGKEYKLKPIG 222
Query: 224 DLGPVIDAGGIFAYARKTGMIASR 247
D GPVI+AGGIFAYARKTGMIAS+
Sbjct: 223 DAGPVIEAGGIFAYARKTGMIASK 246
>gi|226508518|ref|NP_001152605.1| 3-isopropylmalate dehydratase small subunit 2 [Zea mays]
gi|195616716|gb|ACG30188.1| 3-isopropylmalate dehydratase small subunit 2 [Zea mays]
gi|195618202|gb|ACG30931.1| 3-isopropylmalate dehydratase small subunit 2 [Zea mays]
Length = 249
Score = 273 bits (699), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 131/180 (72%), Positives = 150/180 (83%), Gaps = 2/180 (1%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLP-ATYTTRFIDENETK 128
FHG C+VVGDNIDTDQIIPAE+LTLVPS PDEY KLGS+A GLP A Y T F+ E
Sbjct: 67 FHGECFVVGDNIDTDQIIPAEHLTLVPSKPDEYRKLGSFAFAGLPSAAYPTPFVAPGEES 126
Query: 129 TKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLD-SEA 187
++Y II+ G NFGCGSSREHAPVALGAAG A+VAE YARIFFRNSVATGE+YPL+ ++
Sbjct: 127 SRYAIIVGGANFGCGSSREHAPVALGAAGARAIVAEGYARIFFRNSVATGEVYPLELTDV 186
Query: 188 RLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLGPVIDAGGIFAYARKTGMIASR 247
+EC TGDVVT+++A S INHT+GKEYKLKPIGD GPVI+AGGIFAYARKTGMIAS+
Sbjct: 187 GAWKECKTGDVVTVDLANSVFINHTSGKEYKLKPIGDAGPVIEAGGIFAYARKTGMIASK 246
>gi|195658047|gb|ACG48491.1| 3-isopropylmalate dehydratase small subunit 2 [Zea mays]
Length = 249
Score = 270 bits (691), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 130/181 (71%), Positives = 148/181 (81%), Gaps = 2/181 (1%)
Query: 69 TFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLP-ATYTTRFIDENET 127
FHG C+VVGDNIDTDQIIPAE+LTLVPS PDEY KLGS+A GLP A Y T F+ E
Sbjct: 66 VFHGECFVVGDNIDTDQIIPAEHLTLVPSKPDEYRKLGSFAFAGLPSAAYPTPFVAPGEE 125
Query: 128 KTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLD-SE 186
++Y II+ G NFGCGSSREHAPVALGAAG A+VAE YARIFFRNSVA GE+YPL+ ++
Sbjct: 126 SSRYAIIVGGANFGCGSSREHAPVALGAAGARAIVAEGYARIFFRNSVAXGEVYPLELTD 185
Query: 187 ARLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLGPVIDAGGIFAYARKTGMIAS 246
+EC TGDVVT+++A S INHT GKEYKLKPIGD GPVI+AGGIFAYARKTGMIAS
Sbjct: 186 VGAWKECKTGDVVTVDLANSVFINHTXGKEYKLKPIGDAGPVIEAGGIFAYARKTGMIAS 245
Query: 247 R 247
+
Sbjct: 246 K 246
>gi|297824283|ref|XP_002880024.1| aconitase C-terminal domain-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325863|gb|EFH56283.1| aconitase C-terminal domain-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 255
Score = 269 bits (688), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 135/223 (60%), Positives = 164/223 (73%), Gaps = 10/223 (4%)
Query: 27 FIPHSLKFTTGNGRAAVTFQRAVSVIPKATSADSRATKE-PTATFHGLCYVVGDNIDTDQ 85
FIP S+ T+ +A ++IP+A +A+S + + TFHGLCYV+ DNIDTDQ
Sbjct: 38 FIPSSISLTSRGTSSA-------TIIPRAAAAESDSNEALANTTFHGLCYVLKDNIDTDQ 90
Query: 86 IIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKIIIAGGNFGCGSS 145
IIPA PSN E +++ ++AL GLP + TRF++ E ++KY III G NFGCGSS
Sbjct: 91 IIPAGAACTFPSNQQERDEIAAHALSGLPDFHKTRFVEPGENRSKYSIIIGGENFGCGSS 150
Query: 146 REHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEECSTGDVVTIEIAE 205
REHAPV LGAAG A+VAESYARIFFRNSVATGE++PL+SE R+CEEC TGD VTIE+++
Sbjct: 151 REHAPVCLGAAGAKAIVAESYARIFFRNSVATGEVFPLESEVRVCEECKTGDTVTIELSD 210
Query: 206 S--RLINHTTGKEYKLKPIGDLGPVIDAGGIFAYARKTGMIAS 246
S L NHTTGK YKLK IGD GPVIDAGGIFAYAR GMI S
Sbjct: 211 SGGLLTNHTTGKNYKLKSIGDAGPVIDAGGIFAYARMMGMIPS 253
>gi|15224222|ref|NP_181838.1| isopropylmalate isomerase 2 [Arabidopsis thaliana]
gi|3763919|gb|AAC64299.1| 3-isopropylmalate dehydratase, small subunit [Arabidopsis thaliana]
gi|16974633|gb|AAL31219.1| At2g43100/MFL8.4 [Arabidopsis thaliana]
gi|17380708|gb|AAL36184.1| putative 3-isopropylmalate dehydratase small subunit [Arabidopsis
thaliana]
gi|20197631|gb|AAM15160.1| 3-isopropylmalate dehydratase, small subunit [Arabidopsis thaliana]
gi|21436289|gb|AAM51283.1| putative 3-isopropylmalate dehydratase small subunit [Arabidopsis
thaliana]
gi|330255115|gb|AEC10209.1| isopropylmalate isomerase 2 [Arabidopsis thaliana]
Length = 256
Score = 266 bits (680), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 135/224 (60%), Positives = 157/224 (70%), Gaps = 20/224 (8%)
Query: 43 VTFQRAVSVIPKATSADSRATKEPT------------------ATFHGLCYVVGDNIDTD 84
+ F + S+IP + S SR T PT TFHGLCYV+ DNIDTD
Sbjct: 31 LRFNGSTSLIPSSISITSRGTSSPTIIPRAAASESDSNEALANTTFHGLCYVLKDNIDTD 90
Query: 85 QIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKIIIAGGNFGCGS 144
QIIPA PSN E +++ ++AL GLP + TRFI+ E ++KY III G NFGCGS
Sbjct: 91 QIIPAGAACTFPSNQQERDEIAAHALSGLPDFHKTRFIEPGENRSKYSIIIGGENFGCGS 150
Query: 145 SREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEECSTGDVVTIEIA 204
SREHAPV LGAAG A+VAESYARIFFRNSVATGE++PL+SE R+CEEC TGD VTIE++
Sbjct: 151 SREHAPVCLGAAGAKAIVAESYARIFFRNSVATGEVFPLESEVRVCEECKTGDTVTIELS 210
Query: 205 ES--RLINHTTGKEYKLKPIGDLGPVIDAGGIFAYARKTGMIAS 246
+S L NHTTGK YKLK IGD GPVIDAGGIFAYAR GMI S
Sbjct: 211 DSGGLLTNHTTGKNYKLKSIGDAGPVIDAGGIFAYARMMGMIPS 254
>gi|302805123|ref|XP_002984313.1| hypothetical protein SELMODRAFT_119930 [Selaginella moellendorffii]
gi|302826721|ref|XP_002994768.1| hypothetical protein SELMODRAFT_139096 [Selaginella moellendorffii]
gi|300136925|gb|EFJ04169.1| hypothetical protein SELMODRAFT_139096 [Selaginella moellendorffii]
gi|300148162|gb|EFJ14823.1| hypothetical protein SELMODRAFT_119930 [Selaginella moellendorffii]
Length = 187
Score = 265 bits (678), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 126/181 (69%), Positives = 149/181 (82%), Gaps = 1/181 (0%)
Query: 66 PTATFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDEN 125
P+ G C+VV DNIDTDQIIPAEYLTLVPS PDEYEKLGSYA+ GLP Y +F++
Sbjct: 6 PSRQISGKCFVVRDNIDTDQIIPAEYLTLVPSKPDEYEKLGSYAMAGLPPHYG-QFMEPG 64
Query: 126 ETKTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDS 185
++KTKY IIIAG NFGCGSSREHAPVALGA+G VVAESYARIFFRNSVATGE+YP++
Sbjct: 65 KSKTKYSIIIAGSNFGCGSSREHAPVALGASGIQVVVAESYARIFFRNSVATGEMYPVEC 124
Query: 186 EARLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLGPVIDAGGIFAYARKTGMIA 245
EAR+C+E GD VT+++ ++NH+TGKEY LKP+GD PVI+AGGIFAYAR+TGMI
Sbjct: 125 EARICDEFHNGDDVTVDMERDVVVNHSTGKEYALKPLGDAAPVIEAGGIFAYARQTGMIP 184
Query: 246 S 246
S
Sbjct: 185 S 185
>gi|15231608|ref|NP_191458.1| isopropylmalate isomerase 1 [Arabidopsis thaliana]
gi|7529742|emb|CAB86927.1| 3-isopropylmalate dehydratase-like protein (small subunit)
[Arabidopsis thaliana]
gi|17529162|gb|AAL38807.1| putative 3-isopropylmalate dehydratase protein small subunit
[Arabidopsis thaliana]
gi|29824169|gb|AAP04045.1| putative 3-isopropylmalate dehydratase small subunit [Arabidopsis
thaliana]
gi|332646336|gb|AEE79857.1| isopropylmalate isomerase 1 [Arabidopsis thaliana]
Length = 253
Score = 262 bits (670), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 141/197 (71%), Positives = 158/197 (80%), Gaps = 8/197 (4%)
Query: 55 ATSADS--RATKEPTATFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIG 112
A+S+DS T+E TFHGLC+V+ DNIDTDQIIPAEY TL+PS P++ EKLGS+AL G
Sbjct: 59 ASSSDSGESITRE---TFHGLCFVLKDNIDTDQIIPAEYGTLIPSIPEDREKLGSFALNG 115
Query: 113 LPATYTTRFIDENETKTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFR 172
LP Y RF+ E K+KY +II G NFGCGSSREHAPV LGAAG AVVAESYARIFFR
Sbjct: 116 LPKFYNERFVVPGEMKSKYSVIIGGDNFGCGSSREHAPVCLGAAGAKAVVAESYARIFFR 175
Query: 173 NSVATGEIYPLDSEARLCEECSTGDVVTIEIAE---SRLINHTTGKEYKLKPIGDLGPVI 229
N VATGEI+PL+SE R+C+EC TGDVVTIE E S LINHTT KEYKLKP+GD GPVI
Sbjct: 176 NCVATGEIFPLESEVRICDECKTGDVVTIEHKEDGSSLLINHTTRKEYKLKPLGDAGPVI 235
Query: 230 DAGGIFAYARKTGMIAS 246
DAGGIFAYARK GMI S
Sbjct: 236 DAGGIFAYARKAGMIPS 252
>gi|299473371|emb|CBN77769.1| 3-isopropylmalate dehydratase [Ectocarpus siliculosus]
Length = 255
Score = 262 bits (669), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 121/179 (67%), Positives = 145/179 (81%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
+ G C+VV DNIDTDQIIPAEYLTLVPSN DEYEKLGSYA+IGLP YTTR+++E T
Sbjct: 76 YTGQCFVVKDNIDTDQIIPAEYLTLVPSNADEYEKLGSYAMIGLPDVYTTRYVEEGSMAT 135
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
+Y I+IAG NFGCGSSREHAP+A+GAAG VVAESYARIFFRNS+ATGE+YP + + RL
Sbjct: 136 RYPIMIAGDNFGCGSSREHAPIAMGAAGTRVVVAESYARIFFRNSIATGELYPYECQERL 195
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLGPVIDAGGIFAYARKTGMIASRN 248
+ +TGD VT+++ LINH+TGKEY L P+GD GPVI+AGG+F YA KTGMI +
Sbjct: 196 VDAFTTGDDVTVDLTTDTLINHSTGKEYPLNPLGDAGPVINAGGLFPYAIKTGMIKKMD 254
>gi|297820734|ref|XP_002878250.1| aconitase C-terminal domain-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324088|gb|EFH54509.1| aconitase C-terminal domain-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 253
Score = 261 bits (668), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 135/181 (74%), Positives = 149/181 (82%), Gaps = 3/181 (1%)
Query: 69 TFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETK 128
TFHGLC+V+ DNIDTDQIIPAEY TL+PS P++ EKLGS+AL GLP Y RF+ E K
Sbjct: 69 TFHGLCFVLKDNIDTDQIIPAEYGTLIPSIPEDREKLGSFALNGLPKFYNERFVVPGEIK 128
Query: 129 TKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEAR 188
+KY +II G NFGCGSSREHAPV LGAAG AVVAESYARIFFRN VATGEI+PL+SE R
Sbjct: 129 SKYSVIIGGDNFGCGSSREHAPVCLGAAGAKAVVAESYARIFFRNCVATGEIFPLESEVR 188
Query: 189 LCEECSTGDVVTIEIAE---SRLINHTTGKEYKLKPIGDLGPVIDAGGIFAYARKTGMIA 245
+C+EC TGDVVTIE E S LINHTT KEYKLKP+GD GPVIDAGGIFAYARK GMI
Sbjct: 189 ICDECKTGDVVTIEHKEDGSSLLINHTTRKEYKLKPLGDAGPVIDAGGIFAYARKAGMIP 248
Query: 246 S 246
S
Sbjct: 249 S 249
>gi|326528295|dbj|BAJ93329.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 274
Score = 259 bits (663), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 131/184 (71%), Positives = 154/184 (83%), Gaps = 2/184 (1%)
Query: 67 TATFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLP-ATYTTRFIDEN 125
+A FHG C+VVGDNIDTDQIIPAE+LTLVPS PDEY KLGS+A +GLP A Y F+
Sbjct: 90 SAAFHGECFVVGDNIDTDQIIPAEHLTLVPSKPDEYRKLGSFAFVGLPSAAYPIPFVAPG 149
Query: 126 ETKTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLD- 184
E ++Y +II G NFGCGSSREHAPVALGAAG AVVAE YARIFFRNSVATGE+YPL+
Sbjct: 150 EESSRYAVIIGGANFGCGSSREHAPVALGAAGARAVVAEGYARIFFRNSVATGEVYPLEL 209
Query: 185 SEARLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLGPVIDAGGIFAYARKTGMI 244
+++ +EC TGDVVT+++ S LINHT+GK+YKLKPIGD GPVI+AGGIFAYARKTGMI
Sbjct: 210 ADSGASKECKTGDVVTVDLDNSVLINHTSGKQYKLKPIGDAGPVIEAGGIFAYARKTGMI 269
Query: 245 ASRN 248
AS++
Sbjct: 270 ASKS 273
>gi|357136840|ref|XP_003570011.1| PREDICTED: 3-isopropylmalate dehydratase small subunit 2-like
[Brachypodium distachyon]
Length = 246
Score = 257 bits (657), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 136/213 (63%), Positives = 163/213 (76%), Gaps = 6/213 (2%)
Query: 38 NGRAAVTFQRAVSVIPKATSADSRATKEPTATFHGLCYVVGDNIDTDQIIPAEYLTLVPS 97
G ++ F R + A + S ++ A FHG C+VVGDNIDTDQIIPAE+LTLVPS
Sbjct: 37 RGTVSLRFHRTRPLTAAAATGGSLSS----AAFHGECFVVGDNIDTDQIIPAEHLTLVPS 92
Query: 98 NPDEYEKLGSYALIGLP-ATYTTRFIDENETKTKYKIIIAGGNFGCGSSREHAPVALGAA 156
PDEY KLGS+A GLP A Y T FI E ++Y +I+ G NFGCGSSREHAPVALGAA
Sbjct: 93 KPDEYRKLGSFAFAGLPTAAYPTPFIAPGEESSRYAVILGGANFGCGSSREHAPVALGAA 152
Query: 157 GCSAVVAESYARIFFRNSVATGEIYPLD-SEARLCEECSTGDVVTIEIAESRLINHTTGK 215
G AVVAE YARIFFRNSVATGE+YPL+ ++ +EC TGDVVT+++ S +INHT+GK
Sbjct: 153 GARAVVAEGYARIFFRNSVATGEVYPLELADTGASKECKTGDVVTVDLDNSVMINHTSGK 212
Query: 216 EYKLKPIGDLGPVIDAGGIFAYARKTGMIASRN 248
+YKLKPIGD GPVI+AGGIFAYARKTGMIAS++
Sbjct: 213 QYKLKPIGDAGPVIEAGGIFAYARKTGMIASKS 245
>gi|159476606|ref|XP_001696402.1| isopropylmalate dehydratase, small subunit [Chlamydomonas
reinhardtii]
gi|158282627|gb|EDP08379.1| isopropylmalate dehydratase, small subunit [Chlamydomonas
reinhardtii]
gi|294845981|gb|ADF43140.1| LEU1Sp [Chlamydomonas reinhardtii]
Length = 214
Score = 256 bits (655), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 129/202 (63%), Positives = 149/202 (73%), Gaps = 6/202 (2%)
Query: 46 QRAVSVIPKATSADSRATKEPTATFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKL 105
Q V V K + D EP G C+V DNIDTDQIIPAEYLTLVPS PDEYEKL
Sbjct: 17 QTCVRVCAKVSKKDG----EPRVV-RGKCFVTKDNIDTDQIIPAEYLTLVPSKPDEYEKL 71
Query: 106 GSYALIGLPA-TYTTRFIDENETKTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAE 164
GSYALIGLP TYTTR++ E E KT+Y III G NFGCGSSREHAPVALGAAG VAE
Sbjct: 72 GSYALIGLPDDTYTTRYVKEGEMKTEYPIIIGGQNFGCGSSREHAPVALGAAGAKVCVAE 131
Query: 165 SYARIFFRNSVATGEIYPLDSEARLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD 224
SYARIFFRN +ATGE+YP ++ RLC+E TG VT+++ + L +H+TGK Y L+ IG+
Sbjct: 132 SYARIFFRNCIATGELYPCETTVRLCDELKTGSEVTVDMDANVLTDHSTGKTYNLQEIGE 191
Query: 225 LGPVIDAGGIFAYARKTGMIAS 246
GPVIDAGGIF YAR+ GMI +
Sbjct: 192 AGPVIDAGGIFEYARRQGMIKT 213
>gi|242063054|ref|XP_002452816.1| hypothetical protein SORBIDRAFT_04g033080 [Sorghum bicolor]
gi|241932647|gb|EES05792.1| hypothetical protein SORBIDRAFT_04g033080 [Sorghum bicolor]
Length = 250
Score = 256 bits (655), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 130/180 (72%), Positives = 150/180 (83%), Gaps = 2/180 (1%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLP-ATYTTRFIDENETK 128
FHG C+VVGDNIDTDQIIPAE+LTLVPS PDEY KLGS+A GLP A Y T F+ E
Sbjct: 68 FHGECFVVGDNIDTDQIIPAEHLTLVPSKPDEYRKLGSFAFAGLPSAAYPTPFVAPGEES 127
Query: 129 TKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLD-SEA 187
T+Y +++ G NFGCGSSREHAPVALGAAG AVVAE YARIFFRNSVATGE+YPL+ ++
Sbjct: 128 TRYAVVVGGANFGCGSSREHAPVALGAAGARAVVAEGYARIFFRNSVATGEVYPLELTDT 187
Query: 188 RLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLGPVIDAGGIFAYARKTGMIASR 247
+EC TGDVVT++++ S INHT+GKEYKLKPIGD GPVI+AGGIFAYARKTGMIAS+
Sbjct: 188 GAWKECKTGDVVTVDLSNSVFINHTSGKEYKLKPIGDAGPVIEAGGIFAYARKTGMIASK 247
>gi|125540544|gb|EAY86939.1| hypothetical protein OsI_08324 [Oryza sativa Indica Group]
Length = 210
Score = 256 bits (653), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 131/181 (72%), Positives = 151/181 (83%), Gaps = 2/181 (1%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLP-ATYTTRFIDENETK 128
FHG C+VVGDNIDTDQIIPAE+LTLVPS PDEY KLGS+A +GLP A Y T F+ E
Sbjct: 29 FHGECFVVGDNIDTDQIIPAEHLTLVPSKPDEYRKLGSFAFVGLPTAAYPTPFVAPGEET 88
Query: 129 TKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLD-SEA 187
T+Y +II G NFGCGSSREHAPVALGAAG AVVAE YARIFFRNSVATGE+YPL+ ++
Sbjct: 89 TRYAVIIGGANFGCGSSREHAPVALGAAGARAVVAEGYARIFFRNSVATGEVYPLELADT 148
Query: 188 RLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLGPVIDAGGIFAYARKTGMIASR 247
+EC TGDVVT+E+ +INHT+GK+YKLKPIGD GPVI+AGGIFAYARKTGMIAS+
Sbjct: 149 GAWKECKTGDVVTVELDNCVMINHTSGKQYKLKPIGDAGPVIEAGGIFAYARKTGMIASK 208
Query: 248 N 248
+
Sbjct: 209 S 209
>gi|115447675|ref|NP_001047617.1| Os02g0655300 [Oryza sativa Japonica Group]
gi|49388204|dbj|BAD25327.1| 3-isopropylmalate dehydratase, small subunit-like [Oryza sativa
Japonica Group]
gi|49388549|dbj|BAD25668.1| 3-isopropylmalate dehydratase, small subunit-like [Oryza sativa
Japonica Group]
gi|113537148|dbj|BAF09531.1| Os02g0655300 [Oryza sativa Japonica Group]
gi|125583120|gb|EAZ24051.1| hypothetical protein OsJ_07781 [Oryza sativa Japonica Group]
gi|215692575|dbj|BAG87995.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215741078|dbj|BAG97573.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767608|dbj|BAG99836.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 257
Score = 255 bits (652), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 131/181 (72%), Positives = 151/181 (83%), Gaps = 2/181 (1%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLP-ATYTTRFIDENETK 128
FHG C+VVGDNIDTDQIIPAE+LTLVPS PDEY KLGS+A +GLP A Y T F+ E
Sbjct: 76 FHGECFVVGDNIDTDQIIPAEHLTLVPSKPDEYRKLGSFAFVGLPTAAYPTPFVAPGEET 135
Query: 129 TKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLD-SEA 187
T+Y +II G NFGCGSSREHAPVALGAAG AVVAE YARIFFRNSVATGE+YPL+ ++
Sbjct: 136 TRYAVIIGGANFGCGSSREHAPVALGAAGARAVVAEGYARIFFRNSVATGEVYPLELADT 195
Query: 188 RLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLGPVIDAGGIFAYARKTGMIASR 247
+EC TGDVVT+E+ +INHT+GK+YKLKPIGD GPVI+AGGIFAYARKTGMIAS+
Sbjct: 196 GAWKECKTGDVVTVELDNCVMINHTSGKQYKLKPIGDAGPVIEAGGIFAYARKTGMIASK 255
Query: 248 N 248
+
Sbjct: 256 S 256
>gi|14140144|emb|CAC39061.1| putative protein [Oryza sativa]
gi|34398297|gb|AAQ67235.1| 3-isopropylmalate dehydratase small subunit [Oryza sativa Japonica
Group]
Length = 257
Score = 255 bits (652), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 131/181 (72%), Positives = 151/181 (83%), Gaps = 2/181 (1%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLP-ATYTTRFIDENETK 128
FHG C+VVGDNIDTDQIIPAE+LTLVPS PDEY KLGS+A +GLP A Y T F+ E
Sbjct: 76 FHGECFVVGDNIDTDQIIPAEHLTLVPSKPDEYRKLGSFAFVGLPTAAYPTPFVAPGEET 135
Query: 129 TKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLD-SEA 187
T+Y +II G NFGCGSSREHAPVALGAAG AVVAE YARIFFRNSVATGE+YPL+ ++
Sbjct: 136 TRYAVIIGGANFGCGSSREHAPVALGAAGARAVVAEGYARIFFRNSVATGEVYPLELADT 195
Query: 188 RLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLGPVIDAGGIFAYARKTGMIASR 247
+EC TGDVVT+E+ +INHT+GK+YKLKPIGD GPVI+AGGIFAYARKTGMIAS+
Sbjct: 196 GAWKECKTGDVVTVELDNCVMINHTSGKQYKLKPIGDAGPVIEAGGIFAYARKTGMIASK 255
Query: 248 N 248
+
Sbjct: 256 S 256
>gi|294846036|gb|ADF43194.1| LEU1Sm [Chlamydomonas reinhardtii]
Length = 214
Score = 255 bits (652), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 128/202 (63%), Positives = 149/202 (73%), Gaps = 6/202 (2%)
Query: 46 QRAVSVIPKATSADSRATKEPTATFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKL 105
Q V V K + D EP G C+V DNIDTDQIIPAEYLTLVPS PDEYEKL
Sbjct: 17 QTCVRVCAKVSKKDG----EPRVV-RGKCFVTKDNIDTDQIIPAEYLTLVPSKPDEYEKL 71
Query: 106 GSYALIGLPA-TYTTRFIDENETKTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAE 164
GSYALIGLP TYTTR++ + E KT+Y III G NFGCGSSREHAPVALGAAG VAE
Sbjct: 72 GSYALIGLPDDTYTTRYVKDGEMKTEYPIIIGGQNFGCGSSREHAPVALGAAGAKVCVAE 131
Query: 165 SYARIFFRNSVATGEIYPLDSEARLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD 224
SYARIFFRN +ATGE+YP ++ RLC+E TG VT+++ + L +H+TGK Y L+ IG+
Sbjct: 132 SYARIFFRNCIATGELYPCETTVRLCDELKTGSEVTVDMDANVLTDHSTGKTYNLQEIGE 191
Query: 225 LGPVIDAGGIFAYARKTGMIAS 246
GPVIDAGGIF YAR+ GMI +
Sbjct: 192 AGPVIDAGGIFEYARRQGMIKT 213
>gi|219921385|emb|CAQ52411.1| 3-isopropylmalate dehydratase [Laminaria digitata]
Length = 249
Score = 255 bits (651), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 118/181 (65%), Positives = 143/181 (79%)
Query: 64 KEPTATFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFID 123
+E + G C+VV DNIDTDQIIPAEYLTLVPS DEYEKLGSYA+IGLP+ Y TRF++
Sbjct: 64 RERPTKYTGACFVVKDNIDTDQIIPAEYLTLVPSKADEYEKLGSYAMIGLPSVYKTRFVE 123
Query: 124 ENETKTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPL 183
E KTKY I+IAG NFGCGSSREHAP+ALGAAG VVAESYARIFFRNS+ATGE+YP
Sbjct: 124 EGSMKTKYPIMIAGDNFGCGSSREHAPIALGAAGARVVVAESYARIFFRNSIATGELYPY 183
Query: 184 DSEARLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLGPVIDAGGIFAYARKTGM 243
+ + RL + TGD +T++++ L NH +GKEY L P+GD PVI+AGG+F +A +TGM
Sbjct: 184 ECQERLVDIIKTGDELTVDLSTDTLTNHASGKEYPLTPLGDAAPVINAGGLFPFAIQTGM 243
Query: 244 I 244
I
Sbjct: 244 I 244
>gi|300867101|ref|ZP_07111768.1| 3-isopropylmalate dehydratase, small subunit [Oscillatoria sp. PCC
6506]
gi|300334932|emb|CBN56934.1| 3-isopropylmalate dehydratase, small subunit [Oscillatoria sp. PCC
6506]
Length = 181
Score = 254 bits (649), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 122/181 (67%), Positives = 146/181 (80%), Gaps = 1/181 (0%)
Query: 67 TATFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENE 126
+ G +V+ DNIDTDQIIPAEYLTLVPS PDEYEKLGSYAL+GLP Y +FI E
Sbjct: 2 SKVIRGQIFVLDDNIDTDQIIPAEYLTLVPSKPDEYEKLGSYALVGLPNRYG-KFIQPPE 60
Query: 127 TKTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSE 186
KT+Y II+AG NFGCGSSREHAP+ALGAAG AVVA+SYARIFFRN ATGE+YP +S
Sbjct: 61 IKTRYPIIVAGENFGCGSSREHAPIALGAAGVQAVVAQSYARIFFRNCSATGELYPWESV 120
Query: 187 ARLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLGPVIDAGGIFAYARKTGMIAS 246
RLC+ +TG V+I+ ++++INHT GK Y+LKP+GD+GPVIDAGG+F YAR TGMIA+
Sbjct: 121 ERLCDLFATGQDVSIDSEQNQIINHTLGKTYELKPLGDVGPVIDAGGLFDYARLTGMIAT 180
Query: 247 R 247
R
Sbjct: 181 R 181
>gi|428209410|ref|YP_007093763.1| 3-isopropylmalate dehydratase small subunit [Chroococcidiopsis
thermalis PCC 7203]
gi|428011331|gb|AFY89894.1| 3-isopropylmalate dehydratase, small subunit [Chroococcidiopsis
thermalis PCC 7203]
Length = 181
Score = 252 bits (643), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 120/177 (67%), Positives = 145/177 (81%), Gaps = 1/177 (0%)
Query: 71 HGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTK 130
GL +VV DNIDTDQIIPAEYLTLVPS PDEYEKLGSYA+IGLP Y +FI +E KT+
Sbjct: 6 RGLIFVVDDNIDTDQIIPAEYLTLVPSKPDEYEKLGSYAMIGLPDRYG-KFIAADEMKTR 64
Query: 131 YKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLC 190
Y IIIAG NFGCGSSREHAP+ALGAAG AV+A+SYARIFFRN V+TGE+YP +S RLC
Sbjct: 65 YPIIIAGENFGCGSSREHAPIALGAAGVKAVIAQSYARIFFRNCVSTGELYPWESGERLC 124
Query: 191 EECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLGPVIDAGGIFAYARKTGMIASR 247
+ TG VT++ ++++INHT + Y LK +G++ PVIDAGGIFAYAR+TGMI++R
Sbjct: 125 DRFVTGQEVTVDFDKNQIINHTLDQTYSLKSLGEIKPVIDAGGIFAYARQTGMISAR 181
>gi|428320068|ref|YP_007117950.1| 3-isopropylmalate dehydratase, small subunit [Oscillatoria
nigro-viridis PCC 7112]
gi|428243748|gb|AFZ09534.1| 3-isopropylmalate dehydratase, small subunit [Oscillatoria
nigro-viridis PCC 7112]
Length = 182
Score = 251 bits (640), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 119/177 (67%), Positives = 145/177 (81%), Gaps = 1/177 (0%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G +VV DNIDTDQIIPAEYLTLVPS PDEYEKLGSYA+IGLP Y +FI+ E KT+Y
Sbjct: 7 GQIFVVDDNIDTDQIIPAEYLTLVPSKPDEYEKLGSYAMIGLPDRYG-KFIESGEQKTRY 65
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
IIIAG NFGCGSSREHAP+ALGAAG +AVVA SYARIFFRN ATGE+YP++S RLC+
Sbjct: 66 PIIIAGENFGCGSSREHAPIALGAAGVTAVVALSYARIFFRNCSATGELYPMESVDRLCD 125
Query: 192 ECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLGPVIDAGGIFAYARKTGMIASRN 248
+TG VT++ +++NHT + + LKP+G++GPVIDAGG+F YAR+TGMIA+R+
Sbjct: 126 LFATGQEVTVDFTAEQIVNHTLDRTFSLKPLGEVGPVIDAGGLFEYARQTGMIAARS 182
>gi|334119749|ref|ZP_08493834.1| 3-isopropylmalate dehydratase, small subunit [Microcoleus vaginatus
FGP-2]
gi|333457911|gb|EGK86532.1| 3-isopropylmalate dehydratase, small subunit [Microcoleus vaginatus
FGP-2]
Length = 182
Score = 249 bits (636), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 120/177 (67%), Positives = 144/177 (81%), Gaps = 1/177 (0%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G +VV DNIDTDQIIPAEYLTLVPS PDEYEKLGSYA+IGLP Y +FI+ E KT+Y
Sbjct: 7 GQIFVVDDNIDTDQIIPAEYLTLVPSKPDEYEKLGSYAMIGLPDRYG-KFIESGEQKTRY 65
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
IIIAG NFGCGSSREHAP+ALGAAG +AVVA SYARIFFRN ATGE+YP++S RLC+
Sbjct: 66 PIIIAGENFGCGSSREHAPIALGAAGVTAVVALSYARIFFRNCSATGELYPIESVERLCD 125
Query: 192 ECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLGPVIDAGGIFAYARKTGMIASRN 248
+TG VTI+ ++NHT + + LKP+G++GPVIDAGG+F YAR+TGMIA+R+
Sbjct: 126 LFATGQEVTIDFTAEVIVNHTLDQTFSLKPLGEVGPVIDAGGLFDYARQTGMIAARS 182
>gi|428305973|ref|YP_007142798.1| 3-isopropylmalate dehydratase small subunit [Crinalium epipsammum
PCC 9333]
gi|428247508|gb|AFZ13288.1| 3-isopropylmalate dehydratase, small subunit [Crinalium epipsammum
PCC 9333]
Length = 180
Score = 249 bits (635), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 120/177 (67%), Positives = 140/177 (79%), Gaps = 1/177 (0%)
Query: 69 TFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETK 128
G +V+ DNIDTDQIIPAEYLTLVPS PDEYEKLGSYALIGLP Y +FI E K
Sbjct: 4 VIRGQIFVLDDNIDTDQIIPAEYLTLVPSKPDEYEKLGSYALIGLPDRYG-KFIAPEEIK 62
Query: 129 TKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEAR 188
T+Y II+AG NFGCGSSREHAP+ALGA+G AV+A+SYARIFFRN ATGE+YP +S R
Sbjct: 63 TRYPIIVAGENFGCGSSREHAPIALGASGVEAVIAQSYARIFFRNCSATGELYPWESVER 122
Query: 189 LCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLGPVIDAGGIFAYARKTGMIA 245
LC++ TG V I+ ++LINHT + Y LKP+GD+ PVIDAGGIFAYAR+TGMIA
Sbjct: 123 LCDQFETGQEVEIDFDNNQLINHTLNQTYPLKPLGDIKPVIDAGGIFAYARQTGMIA 179
>gi|434394097|ref|YP_007129044.1| 3-isopropylmalate dehydratase, small subunit [Gloeocapsa sp. PCC
7428]
gi|428265938|gb|AFZ31884.1| 3-isopropylmalate dehydratase, small subunit [Gloeocapsa sp. PCC
7428]
Length = 180
Score = 247 bits (630), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 118/177 (66%), Positives = 140/177 (79%), Gaps = 1/177 (0%)
Query: 69 TFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETK 128
G +VV DNIDTDQIIPAEYLTLVPS PDEYEKLGSYAL+GLP Y +FI + K
Sbjct: 4 VIQGKIFVVDDNIDTDQIIPAEYLTLVPSKPDEYEKLGSYALVGLPDRYG-KFIAPGQMK 62
Query: 129 TKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEAR 188
T Y II+AG NFGCGSSREHAP+ALGA+G AVVA+SYARIFFRN ATGE+YP +S R
Sbjct: 63 TTYPIIVAGENFGCGSSREHAPIALGASGVEAVVAQSYARIFFRNCAATGELYPWESVER 122
Query: 189 LCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLGPVIDAGGIFAYARKTGMIA 245
LC+E TG VTI+ ++++NH+ K Y LKP+G++ PVIDAGGIFAYAR+TGMI+
Sbjct: 123 LCDEFQTGQEVTIDFDRNQIVNHSLNKVYALKPLGEVEPVIDAGGIFAYARQTGMIS 179
>gi|67772402|gb|AAY79403.1| isopropylmalate dehydratase [Gonium pectorale]
Length = 213
Score = 246 bits (628), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 126/206 (61%), Positives = 149/206 (72%), Gaps = 12/206 (5%)
Query: 40 RAAVTFQRAVSVIPKATSADSRATKEPTATFHGLCYVVGDNIDTDQIIPAEYLTLVPSNP 99
RAAV Q VS R+ EP G C+V DNIDTDQIIPAEYLTLVPS P
Sbjct: 16 RAAVCVQAKVS----------RSEGEPR-VIRGKCFVTRDNIDTDQIIPAEYLTLVPSKP 64
Query: 100 DEYEKLGSYALIGLPAT-YTTRFIDENETKTKYKIIIAGGNFGCGSSREHAPVALGAAGC 158
+EYEKLGSYALIGLP Y R++ E E KT+Y +II G NFGCGSSREHAPV+LGAAG
Sbjct: 65 EEYEKLGSYALIGLPDDLYPERYVKEGEMKTEYPVIIGGQNFGCGSSREHAPVSLGAAGA 124
Query: 159 SAVVAESYARIFFRNSVATGEIYPLDSEARLCEECSTGDVVTIEIAESRLINHTTGKEYK 218
VAESYARIFFRN +ATGE+YP ++ ARLC+ TG VT+++ ++ L +H+TGK Y
Sbjct: 125 KVCVAESYARIFFRNCIATGELYPCETGARLCDVLKTGTEVTVDMDKNVLTDHSTGKTYP 184
Query: 219 LKPIGDLGPVIDAGGIFAYARKTGMI 244
L+ IG+ GPVIDAGGIF YAR+ GMI
Sbjct: 185 LQEIGEAGPVIDAGGIFEYARRQGMI 210
>gi|428218662|ref|YP_007103127.1| 3-isopropylmalate dehydratase small subunit [Pseudanabaena sp. PCC
7367]
gi|427990444|gb|AFY70699.1| 3-isopropylmalate dehydratase, small subunit [Pseudanabaena sp. PCC
7367]
Length = 183
Score = 246 bits (628), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 118/176 (67%), Positives = 141/176 (80%), Gaps = 1/176 (0%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G +VV NIDTDQIIPAEYLTLVPS PDEYEKLGSYA++GLP Y +F+ E KT Y
Sbjct: 7 GKIFVVDHNIDTDQIIPAEYLTLVPSKPDEYEKLGSYAMVGLPDRYG-KFVAEGAMKTDY 65
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
II+AG NFGCGSSREHAP+ALGAAG AV+AESYARIFFRN ATGE+YP ++ RLC+
Sbjct: 66 PIIVAGENFGCGSSREHAPIALGAAGVQAVIAESYARIFFRNCTATGELYPWEAVERLCD 125
Query: 192 ECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLGPVIDAGGIFAYARKTGMIASR 247
TG VTI+ ++LINHT G+ Y+LK +G++GPVIDAGGIFAYAR+TGMI ++
Sbjct: 126 RFETGHEVTIDFDNNQLINHTLGETYELKSLGEVGPVIDAGGIFAYARQTGMIPTK 181
>gi|428222173|ref|YP_007106343.1| 3-isopropylmalate dehydratase small subunit [Synechococcus sp. PCC
7502]
gi|427995513|gb|AFY74208.1| 3-isopropylmalate dehydratase, small subunit [Synechococcus sp. PCC
7502]
Length = 183
Score = 245 bits (626), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 117/173 (67%), Positives = 139/173 (80%), Gaps = 1/173 (0%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G+ +VV DNIDTDQIIPAEYLTLVPS PDEYEKLGSYA+IGLP + +FI E KT Y
Sbjct: 7 GIVFVVDDNIDTDQIIPAEYLTLVPSKPDEYEKLGSYAMIGLPDRFG-KFIPEGAAKTPY 65
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
IIIAG NFGCGSSREHAP+ALGA+G VVA+SYARIFFRNS ATGE+YP +S RLC+
Sbjct: 66 PIIIAGENFGCGSSREHAPIALGASGVEVVVAQSYARIFFRNSTATGELYPWESIDRLCD 125
Query: 192 ECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLGPVIDAGGIFAYARKTGMI 244
STG V ++ +++ N TTG+ + LKP+GD+ PVIDAGG+FAYAR+TGMI
Sbjct: 126 RFSTGQVAILDFDHNQITNETTGEVFALKPLGDVAPVIDAGGLFAYARQTGMI 178
>gi|111608913|gb|ABH11014.1| 3-isopropylmalate dehydratase [Polytomella parva]
Length = 182
Score = 244 bits (623), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 118/176 (67%), Positives = 139/176 (78%), Gaps = 1/176 (0%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPAT-YTTRFIDENETKTK 130
G C+V DNIDTDQIIPAEYLTLVPS PDEYEKLGSYALIGLP Y TRF+ + + KT
Sbjct: 6 GKCFVTKDNIDTDQIIPAEYLTLVPSKPDEYEKLGSYALIGLPDDLYKTRFVKDGKMKTD 65
Query: 131 YKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLC 190
Y III G NFGCGSSREHAPVA+GAAG VVAESYARIFFRN ++TGE+YP ++E RLC
Sbjct: 66 YPIIIGGQNFGCGSSREHAPVAIGAAGGRVVVAESYARIFFRNCMSTGELYPCETELRLC 125
Query: 191 EECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLGPVIDAGGIFAYARKTGMIAS 246
+ T VT+++ ++ L +H+ GK Y LKPIG+ GPV+DAGGIF YARK GMI +
Sbjct: 126 DILKTDSEVTVDMDKNILTDHSNGKVYDLKPIGEAGPVVDAGGIFEYARKHGMIKT 181
>gi|113474825|ref|YP_720886.1| 3-isopropylmalate dehydratase small subunit [Trichodesmium
erythraeum IMS101]
gi|110165873|gb|ABG50413.1| 3-isopropylmalate dehydratase, small subunit [Trichodesmium
erythraeum IMS101]
Length = 183
Score = 244 bits (622), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 115/182 (63%), Positives = 143/182 (78%), Gaps = 1/182 (0%)
Query: 67 TATFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENE 126
T + G +V+ DNIDTDQIIPAEYLTLVPS PDEY+KLG+YAL GLP Y RF++
Sbjct: 2 TKSLTGKIFVLDDNIDTDQIIPAEYLTLVPSKPDEYDKLGTYALCGLPDRYG-RFMEPEA 60
Query: 127 TKTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSE 186
KTKY II+AG NFGCGSSREHAP+ALGA+G AVVA+SYARIFFRN ATGE+YP +S
Sbjct: 61 MKTKYPIIVAGENFGCGSSREHAPIALGASGVQAVVAQSYARIFFRNCSATGELYPWESS 120
Query: 187 ARLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLGPVIDAGGIFAYARKTGMIAS 246
RLCE TG VTI+ +++++NHT + Y+LK +G++ PVIDAGG+FAYAR+TGMI+
Sbjct: 121 DRLCELFKTGQKVTIDFEKNQIVNHTLDQTYQLKSLGEVRPVIDAGGLFAYARQTGMISQ 180
Query: 247 RN 248
+
Sbjct: 181 KE 182
>gi|443477417|ref|ZP_21067266.1| 3-isopropylmalate dehydratase, small subunit [Pseudanabaena biceps
PCC 7429]
gi|443017467|gb|ELS31902.1| 3-isopropylmalate dehydratase, small subunit [Pseudanabaena biceps
PCC 7429]
Length = 182
Score = 242 bits (618), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 119/181 (65%), Positives = 140/181 (77%), Gaps = 1/181 (0%)
Query: 67 TATFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENE 126
+ T G +V+ DNIDTDQIIPAEYLTLVPS PDEYEKLGSYA+IGLP Y RFI E E
Sbjct: 2 SKTIKGKVFVLDDNIDTDQIIPAEYLTLVPSKPDEYEKLGSYAMIGLPDRYD-RFIAEGE 60
Query: 127 TKTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSE 186
+KT Y II+AG NFGCGSSREHAP+ALGAAG AVVA+SYARIFFRN ATGE+YP +S
Sbjct: 61 SKTIYAIIVAGENFGCGSSREHAPIALGAAGLEAVVAQSYARIFFRNCTATGELYPWESV 120
Query: 187 ARLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLGPVIDAGGIFAYARKTGMIAS 246
RL + TG+ TI+ + +IN TTG + LK +GD+ PVIDAGG+F YAR+TGMI +
Sbjct: 121 ERLIDNFKTGEEATIDFDRNLIINETTGLTFALKSLGDVRPVIDAGGLFDYARQTGMIPT 180
Query: 247 R 247
R
Sbjct: 181 R 181
>gi|297592092|gb|ADI46877.1| LEU1Sf [Volvox carteri f. nagariensis]
Length = 215
Score = 242 bits (617), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 120/200 (60%), Positives = 145/200 (72%), Gaps = 6/200 (3%)
Query: 48 AVSVIPKATSADSRATKEPTATFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGS 107
V V K ++ D + G C+V DNIDTDQIIPAEYLTLVPS PDEYEKLGS
Sbjct: 20 CVKVYAKVSTKDGQPR-----VIKGKCFVTRDNIDTDQIIPAEYLTLVPSKPDEYEKLGS 74
Query: 108 YALIGLPAT-YTTRFIDENETKTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESY 166
YALIGLP Y +R++ + E KT Y III G NFGCGSSREHAPVALGAAG VAESY
Sbjct: 75 YALIGLPDNLYPSRYVRDGEMKTAYPIIIGGQNFGCGSSREHAPVALGAAGAKVCVAESY 134
Query: 167 ARIFFRNSVATGEIYPLDSEARLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLG 226
ARIFFRN +ATGE+YP ++ RLC++ +TG VT+++ + L +H+TG Y L+ IG+ G
Sbjct: 135 ARIFFRNCIATGELYPCETTVRLCDKLTTGSDVTVDMENNILTDHSTGATYPLQEIGEAG 194
Query: 227 PVIDAGGIFAYARKTGMIAS 246
PVIDAGGIF YAR+ GMI +
Sbjct: 195 PVIDAGGIFEYARRQGMIKT 214
>gi|307106848|gb|EFN55093.1| hypothetical protein CHLNCDRAFT_12715, partial [Chlorella
variabilis]
Length = 195
Score = 240 bits (613), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 114/172 (66%), Positives = 136/172 (79%), Gaps = 1/172 (0%)
Query: 69 TFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLP-ATYTTRFIDENET 127
G C+V DNIDTDQIIPAEYLTLVPS PDEYEKLGSYAL GLP Y TR+++ +
Sbjct: 24 VIRGKCFVTKDNIDTDQIIPAEYLTLVPSKPDEYEKLGSYALCGLPDEEYPTRYVEVDSM 83
Query: 128 KTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEA 187
KT+Y +II G NFGCGSSREHAPVALGA+G + VVAESYARIFFRN V+TGE+YP++++A
Sbjct: 84 KTEYPVIIGGQNFGCGSSREHAPVALGASGATVVVAESYARIFFRNCVSTGELYPVETDA 143
Query: 188 RLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLGPVIDAGGIFAYAR 239
RLC+E TG V +++ L + TGK+Y LKP+GD GPVIDAGGIF YAR
Sbjct: 144 RLCDELETGREVEVDMVADVLTDLATGKKYSLKPLGDAGPVIDAGGIFEYAR 195
>gi|384254298|gb|EIE27772.1| 3-isopropylmalate dehydratase [Coccomyxa subellipsoidea C-169]
Length = 213
Score = 238 bits (608), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 122/206 (59%), Positives = 149/206 (72%), Gaps = 4/206 (1%)
Query: 40 RAAVTFQRAVSVIPKATSADSRATKEPTATFHGLCYVVGDNIDTDQIIPAEYLTLVPSNP 99
R + QR + + S E T G CYV DNIDTDQIIPAEYLTLVPS P
Sbjct: 8 RHVLRIQRTCRA---SATGTSNGKAENTRVIRGPCYVTRDNIDTDQIIPAEYLTLVPSKP 64
Query: 100 DEYEKLGSYALIGLPAT-YTTRFIDENETKTKYKIIIAGGNFGCGSSREHAPVALGAAGC 158
+EYEKLGSYALIGLP Y RF+++ KT+Y I+I G NFGCGSSREHAPVA+GAAG
Sbjct: 65 EEYEKLGSYALIGLPTELYEKRFVEDGRMKTEYPIVIGGQNFGCGSSREHAPVAMGAAGA 124
Query: 159 SAVVAESYARIFFRNSVATGEIYPLDSEARLCEECSTGDVVTIEIAESRLINHTTGKEYK 218
VVAE+YARIFFRN V+TGE+YP +++ RLCEE TG+ V +++ + L TGK+Y+
Sbjct: 125 KVVVAETYARIFFRNCVSTGELYPCETDLRLCEELETGEEVEVDMNKDVLTVLATGKQYQ 184
Query: 219 LKPIGDLGPVIDAGGIFAYARKTGMI 244
LKPIG+ GPV+DAGGIF YAR+TGM+
Sbjct: 185 LKPIGEAGPVVDAGGIFEYARRTGMM 210
>gi|297592123|gb|ADI46907.1| LEU1Sm [Volvox carteri f. nagariensis]
Length = 220
Score = 238 bits (606), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 114/179 (63%), Positives = 136/179 (75%), Gaps = 1/179 (0%)
Query: 69 TFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPAT-YTTRFIDENET 127
G C+V DNIDTDQIIPAEYLTLVPS PDEY KLGSYALIGLP Y R++++ E
Sbjct: 41 VIRGKCFVTRDNIDTDQIIPAEYLTLVPSKPDEYVKLGSYALIGLPDNLYPIRYVEDGEV 100
Query: 128 KTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEA 187
KT Y II+ G NFGCGSSREHAPVALGAAG VAESYARIFFRN +ATGE+YP ++
Sbjct: 101 KTNYPIIVGGQNFGCGSSREHAPVALGAAGAKVCVAESYARIFFRNCIATGELYPCETPV 160
Query: 188 RLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLGPVIDAGGIFAYARKTGMIAS 246
RLC++ +TG VT+++ + L +H+TG Y L+ IG+ GPVIDAGGIF YAR GMI +
Sbjct: 161 RLCDKLTTGSEVTVDMEMNILTDHSTGATYPLQAIGEAGPVIDAGGIFEYARSEGMIKT 219
>gi|53801464|gb|AAU93934.1| plastid 3-isopropylmalate dehydratase [Helicosporidium sp. ex
Simulium jonesi]
Length = 223
Score = 235 bits (600), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 113/186 (60%), Positives = 138/186 (74%), Gaps = 1/186 (0%)
Query: 60 SRATKEPTATFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPA-TYT 118
++ ++ T G CY+ DNIDTDQIIPAEYLTLVPS P EYEKLGSYA+ GLP Y
Sbjct: 34 AQTSRSGTRKVTGKCYITKDNIDTDQIIPAEYLTLVPSKPAEYEKLGSYAMAGLPEEKYP 93
Query: 119 TRFIDENETKTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG 178
F+ TKT+Y +II G NFGCGSSREHAPV LGAAG VVA+S+ARIFFRN VATG
Sbjct: 94 IPFVAPGSTKTEYAVIIGGDNFGCGSSREHAPVCLGAAGSQVVVAQSFARIFFRNCVATG 153
Query: 179 EIYPLDSEARLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLGPVIDAGGIFAYA 238
E+YP++ + RLC+E +TG V +++ L + TGK+Y LKP+GD GPVIDAGG+FA+A
Sbjct: 154 ELYPVECDTRLCDELNTGSEVEVDMENDVLTDLKTGKKYTLKPLGDAGPVIDAGGLFAFA 213
Query: 239 RKTGMI 244
R GMI
Sbjct: 214 RNEGMI 219
>gi|334184891|ref|NP_001189737.1| Aconitase/3-isopropylmalate dehydratase protein [Arabidopsis
thaliana]
gi|330255114|gb|AEC10208.1| Aconitase/3-isopropylmalate dehydratase protein [Arabidopsis
thaliana]
Length = 222
Score = 235 bits (600), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 123/191 (64%), Positives = 137/191 (71%), Gaps = 33/191 (17%)
Query: 60 SRATKEPT--ATFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATY 117
+R+ EP TFHGLCYVVGDNIDTDQIIPAE+LTLVPSNP+EYEKLGSYAL+GLPA+Y
Sbjct: 58 TRSAAEPQERKTFHGLCYVVGDNIDTDQIIPAEFLTLVPSNPEEYEKLGSYALVGLPASY 117
Query: 118 TTRFIDENETKTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVAT 177
RF+ AVVA+SYARIFFRNSVAT
Sbjct: 118 KERFVQPGAAGA-----------------------------KAVVAQSYARIFFRNSVAT 148
Query: 178 GEIYPLDSEARLCEECSTGDVVTIEIAE--SRLINHTTGKEYKLKPIGDLGPVIDAGGIF 235
GE+YPLDSE R+C+EC+TGDV T+E+ E S LINHTTGKEYKLKPIGD GPVIDAGGIF
Sbjct: 149 GEVYPLDSEVRVCDECTTGDVATVELREGDSILINHTTGKEYKLKPIGDAGPVIDAGGIF 208
Query: 236 AYARKTGMIAS 246
AYARK GMI S
Sbjct: 209 AYARKAGMIPS 219
>gi|443309848|ref|ZP_21039529.1| 3-isopropylmalate dehydratase, small subunit [Synechocystis sp. PCC
7509]
gi|442780111|gb|ELR90323.1| 3-isopropylmalate dehydratase, small subunit [Synechocystis sp. PCC
7509]
Length = 182
Score = 233 bits (595), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 123/177 (69%), Positives = 144/177 (81%), Gaps = 1/177 (0%)
Query: 69 TFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETK 128
+ G+ +VV DNIDTDQIIPAEYLTLVPS PDEYEKLGSYA+IGLP + FI TK
Sbjct: 4 SIRGVIFVVDDNIDTDQIIPAEYLTLVPSKPDEYEKLGSYAMIGLPDRFG-EFIAPGATK 62
Query: 129 TKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEAR 188
T Y II+AG NFGCGSSREHAP+ALGAAG +AV+A+SYARIFFRN ATGE+YP +S R
Sbjct: 63 TIYPIIVAGENFGCGSSREHAPIALGAAGVAAVIAQSYARIFFRNCTATGELYPWESLER 122
Query: 189 LCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLGPVIDAGGIFAYARKTGMIA 245
LC+E TG VTI+ ++RLINHT KEY+L+ +GD+ PVIDAGGIFAYAR+TGMIA
Sbjct: 123 LCDEFVTGQEVTIDFEQNRLINHTLNKEYQLQSLGDVKPVIDAGGIFAYARQTGMIA 179
>gi|196230481|ref|ZP_03129343.1| 3-isopropylmalate dehydratase, small subunit [Chthoniobacter flavus
Ellin428]
gi|196225411|gb|EDY19919.1| 3-isopropylmalate dehydratase, small subunit [Chthoniobacter flavus
Ellin428]
Length = 182
Score = 231 bits (590), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 116/176 (65%), Positives = 140/176 (79%), Gaps = 5/176 (2%)
Query: 75 YVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPA-TYTTRFIDENETKTKYKI 133
YVV DNIDTDQIIPA+YLTLVP+ +EYEKLGSYA+IGLP Y T+FI E KT YKI
Sbjct: 10 YVVQDNIDTDQIIPAQYLTLVPTIAEEYEKLGSYAMIGLPDDAYPTKFIPAGEMKTPYKI 69
Query: 134 IIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEEC 193
+IAG NFGCGSSREHAP+A+GAAG AVVA+S+ARIFFRN VATGE+YP D+ RLC +
Sbjct: 70 VIAGRNFGCGSSREHAPIAMGAAGVEAVVADSFARIFFRNCVATGELYPYDANERLCAKI 129
Query: 194 STGDVVTIEI-AESRLINHTTGKEYKLKPIGDLGPVIDAGGIFAYARKTGMIASRN 248
TGDV T++ A++ +N TT Y LKP+G++ PVIDAGGIF YARK+GMI + +
Sbjct: 130 KTGDVATLDFDADTLTVNGTT---YSLKPLGEVRPVIDAGGIFNYARKSGMIPAHS 182
>gi|223936712|ref|ZP_03628622.1| 3-isopropylmalate dehydratase, small subunit [bacterium Ellin514]
gi|223894563|gb|EEF61014.1| 3-isopropylmalate dehydratase, small subunit [bacterium Ellin514]
Length = 184
Score = 225 bits (574), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 105/182 (57%), Positives = 141/182 (77%), Gaps = 1/182 (0%)
Query: 68 ATFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPAT-YTTRFIDENE 126
+ F G YVV DNIDTDQIIPA+YL LVP+ +EY KLGSYAL GLP + Y+TR++ E +
Sbjct: 3 SVFTGPVYVVRDNIDTDQIIPAQYLNLVPTIEEEYVKLGSYALCGLPESLYSTRYVKEGQ 62
Query: 127 TKTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSE 186
++Y I++AG NFGCGSSREHAP+A+G+A C V+AES+ARIFFRN VATGE+YP + +
Sbjct: 63 LDSEYPIVVAGRNFGCGSSREHAPIAMGSAACELVLAESFARIFFRNCVATGELYPCECK 122
Query: 187 ARLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLGPVIDAGGIFAYARKTGMIAS 246
RLC+ TGDVVT+++ + + TGK Y K +GD+ PV+DAGG+F +ARK+GMIA+
Sbjct: 123 DRLCDILKTGDVVTVDLDAATVKVKETGKVYSFKALGDVRPVVDAGGLFNFARKSGMIAA 182
Query: 247 RN 248
++
Sbjct: 183 QS 184
>gi|452821151|gb|EME28185.1| 3-isopropylmalate dehydratase small subunit [Galdieria sulphuraria]
Length = 252
Score = 207 bits (528), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 109/180 (60%), Positives = 138/180 (76%), Gaps = 1/180 (0%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPAT-YTTRFIDENETK 128
G +VV DNIDTDQIIPAE+LTLVPS P+EYEKLGSYAL+GLP Y RFI++N+
Sbjct: 73 LRGKVFVVRDNIDTDQIIPAEFLTLVPSVPEEYEKLGSYALVGLPEKEYPIRFIEKNQLH 132
Query: 129 TKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEAR 188
T Y IIIAG NFGCGSSREHAP+ALGAAG AVVA+SYARIFFRN ATGE+YP +S+
Sbjct: 133 TTYTIIIAGNNFGCGSSREHAPIALGAAGAVAVVAKSYARIFFRNCSATGELYPWESKEY 192
Query: 189 LCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLGPVIDAGGIFAYARKTGMIASRN 248
L TG+ I+ + + N ++ +E++L+P+GD+ PVIDAGG+F YAR++GMI ++
Sbjct: 193 LVNHFHTGEEAEIDFGRNMIRNLSSKEEFELEPLGDVLPVIDAGGLFEYARQSGMIPKQS 252
>gi|374851063|dbj|BAL54034.1| 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit
[uncultured planctomycete]
Length = 194
Score = 206 bits (525), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 100/184 (54%), Positives = 132/184 (71%), Gaps = 7/184 (3%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPAT-------YTTRFIDE 124
GL YV+GDNIDTDQIIPA+YL P+ P+EY G YAL G+PA + E
Sbjct: 7 GLVYVLGDNIDTDQIIPAQYLMYNPAIPEEYRMFGKYALSGVPAAQAGLPHGHVPFHGPE 66
Query: 125 NETKTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLD 184
+E + Y+II+AG NFGCGSSREHAP+AL AAG VVAE +ARIF+RN+V G + P +
Sbjct: 67 DEFVSPYRIIVAGRNFGCGSSREHAPIALNAAGIRVVVAEFFARIFYRNAVNGGYLVPFE 126
Query: 185 SEARLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLGPVIDAGGIFAYARKTGMI 244
S RL E+ TGD V I++A +RLINHTTG+ + LKP+GD+ P++ AGG+FAYA + G++
Sbjct: 127 SVERLVEKIRTGDEVEIDVANARLINHTTGQIHPLKPLGDIAPILAAGGLFAYAGQAGLL 186
Query: 245 ASRN 248
+SR+
Sbjct: 187 SSRS 190
>gi|449018069|dbj|BAM81471.1| 3-isopropylmalate dehydratase small subunit [Cyanidioschyzon
merolae strain 10D]
Length = 255
Score = 206 bits (523), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 112/210 (53%), Positives = 142/210 (67%), Gaps = 1/210 (0%)
Query: 40 RAAVTFQRAVSVIPKATSADSRATKEPTATFHGLCYVVGDNIDTDQIIPAEYLTLVPSNP 99
RA V + + + + R T G +VV DNIDTDQIIPAE+L+L+PS P
Sbjct: 43 RATVRMETPAPLRMEDVCSVGRKRDPETGNIQGRVFVVHDNIDTDQIIPAEHLSLLPSVP 102
Query: 100 DEYEKLGSYALIGLP-ATYTTRFIDENETKTKYKIIIAGGNFGCGSSREHAPVALGAAGC 158
EY+ LGS+AL GLP Y RF++E + TKY IIIAG NFGCGSSREHAP+ALGAAG
Sbjct: 103 AEYQLLGSHALEGLPRELYPERFVEEGQLSTKYSIIIAGENFGCGSSREHAPIALGAAGA 162
Query: 159 SAVVAESYARIFFRNSVATGEIYPLDSEARLCEECSTGDVVTIEIAESRLINHTTGKEYK 218
AVVA SYARIFFRN +TGE+YP S+ RL E TGD I+ + N +G+ ++
Sbjct: 163 KAVVATSYARIFFRNCSSTGELYPWVSKTRLVEHFKTGDEAVIDFETLSIRNLNSGQRFE 222
Query: 219 LKPIGDLGPVIDAGGIFAYARKTGMIASRN 248
L+P+G++ PVIDAGG+F YAR+TGMI R+
Sbjct: 223 LEPLGEIQPVIDAGGLFEYARRTGMIKPRS 252
>gi|384915854|ref|ZP_10016059.1| 3-isopropylmalate dehydratase small subunit [Methylacidiphilum
fumariolicum SolV]
gi|384526716|emb|CCG91930.1| 3-isopropylmalate dehydratase small subunit [Methylacidiphilum
fumariolicum SolV]
Length = 182
Score = 204 bits (519), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 102/179 (56%), Positives = 128/179 (71%), Gaps = 3/179 (1%)
Query: 67 TATFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPAT-YTTRFIDEN 125
T G YVVGDNIDTDQIIPA+YL VP+ P+E EKLGS+AL GLP + Y RF++
Sbjct: 2 TKRIFGKAYVVGDNIDTDQIIPAQYLMYVPTVPEELEKLGSHALCGLPESLYPLRFVEAG 61
Query: 126 ETKTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDS 185
+TKT+Y IIIAG NFGCGSSREHAP+AL AAGC V+A+SYARIFFRN +ATG ++P +
Sbjct: 62 KTKTEYPIIIAGKNFGCGSSREHAPIALAAAGCRVVIAKSYARIFFRNCIATGVLFPYEI 121
Query: 186 EARLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLGPVIDAGGIFAYARKTGMI 244
R E+ G + +++ L+ + Y LKP+GD VI+AGGIF YA+KTGMI
Sbjct: 122 GERFPEKIEIGQELVVDLETETLL--VADQVYPLKPLGDAKEVIEAGGIFNYAKKTGMI 178
>gi|189219576|ref|YP_001940217.1| 3-isopropylmalate dehydratase small subunit [Methylacidiphilum
infernorum V4]
gi|189186434|gb|ACD83619.1| 3-isopropylmalate dehydratase small subunit [Methylacidiphilum
infernorum V4]
Length = 182
Score = 196 bits (498), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 97/176 (55%), Positives = 128/176 (72%), Gaps = 7/176 (3%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLP-ATYTTRFIDENETKTK 130
G +VV DNIDTDQIIPA+YL +P+ P+E EKLGS+AL GLP ++Y R+++ +TKT
Sbjct: 7 GKVFVVKDNIDTDQIIPAQYLMYLPTVPEELEKLGSFALSGLPESSYPHRYVEAGKTKTI 66
Query: 131 YKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLC 190
Y IIIAG NFGCGSSREHAP+AL AAGC ++A SYARIFFRN +ATG ++P + +
Sbjct: 67 YPIIIAGKNFGCGSSREHAPIALAAAGCKVIIARSYARIFFRNCIATGAVFPYEIQDEFP 126
Query: 191 EECSTGDVVTIEIAESRLI--NHTTGKEYKLKPIGDLGPVIDAGGIFAYARKTGMI 244
+E TG V +++ E ++I NH + LK +GD VI+AGGIF YA+K+GMI
Sbjct: 127 QEIPTGKEVIVDLDEEKVIIDNHF----FALKSLGDAKAVIEAGGIFNYAKKSGMI 178
>gi|383765793|ref|YP_005444774.1| 3-isopropylmalate dehydratase small subunit [Phycisphaera
mikurensis NBRC 102666]
gi|381386061|dbj|BAM02877.1| 3-isopropylmalate dehydratase small subunit [Phycisphaera
mikurensis NBRC 102666]
Length = 192
Score = 194 bits (492), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 94/181 (51%), Positives = 124/181 (68%), Gaps = 7/181 (3%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYT------TRFIDEN 125
G +V+GD+IDTDQIIPAEYL PS+P+E + G YA +G+P + RF+ E
Sbjct: 12 GKAFVLGDDIDTDQIIPAEYLAYNPSDPEERKFFGMYANVGVPKGQSGLPGGNLRFVPEG 71
Query: 126 ETKTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDS 185
E + YKI+I G NFGCGSSREHAP+AL AG VVAE YARIFFRNSV G + P+++
Sbjct: 72 EFHSAYKIVIGGKNFGCGSSREHAPLALAEAGVEVVVAEFYARIFFRNSVNGGYLLPMEA 131
Query: 186 EARLCE-ECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLGPVIDAGGIFAYARKTGMI 244
RLC+ TGD +++ + L N TGK Y L P+GD+ P++DAGG+FAYAR+ GM+
Sbjct: 132 TERLCDGAVETGDECEVDLDAATLTNRRTGKRYALNPLGDVQPIVDAGGVFAYARQEGML 191
Query: 245 A 245
+
Sbjct: 192 S 192
>gi|300723972|ref|YP_003713286.1| 3-isopropylmalate dehydratase small subunit [Xenorhabdus
nematophila ATCC 19061]
gi|297630503|emb|CBJ91168.1| 3-isopropylmalate dehydratase small subunit (Isopropylmalate
isomerase) (Alpha-IPM isomerase) (IPMI) [Xenorhabdus
nematophila ATCC 19061]
Length = 183
Score = 193 bits (491), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 93/175 (53%), Positives = 124/175 (70%), Gaps = 1/175 (0%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
G YV+ DNIDTDQI+ AEYL + PS P+ Y +L S A+ GLP + FIDEN+ K
Sbjct: 9 IRGEVYVLTDNIDTDQILSAEYLKINPSTPEGYAQLASLAMCGLPEG-SLPFIDENKGKA 67
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
KY II+AG NFGCGSSREHA ALGA+G V+A+SYARIFFRN V+TGE+ P+ ++ARL
Sbjct: 68 KYPIIVAGQNFGCGSSREHAVAALGASGVKVVLAQSYARIFFRNCVSTGELLPIAAQARL 127
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLGPVIDAGGIFAYARKTGMI 244
C++ TGD + I++ + G++Y+ PIG+L ++ AGG+F+YAR TG I
Sbjct: 128 CDKLVTGDCIEIDVENQTVTLLKQGEKYQTDPIGELANIVTAGGLFSYARATGRI 182
>gi|385206631|ref|ZP_10033499.1| 3-isopropylmalate dehydratase, small subunit [Burkholderia sp.
Ch1-1]
gi|385178969|gb|EIF28245.1| 3-isopropylmalate dehydratase, small subunit [Burkholderia sp.
Ch1-1]
Length = 187
Score = 192 bits (489), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 94/179 (52%), Positives = 126/179 (70%), Gaps = 1/179 (0%)
Query: 69 TFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETK 128
T G+ YV+GDNIDTDQI+ AEYL + PS+P+ Y +L S A+ GLP + FID K
Sbjct: 5 TIRGVAYVLGDNIDTDQILTAEYLKINPSSPEGYAQLASLAMCGLPEG-SLPFIDPQTGK 63
Query: 129 TKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEAR 188
+ Y I+I G NFGCGSSREHA V LGAAG AV+A+SYARIFFRN V+TG++ P+ S AR
Sbjct: 64 SPYSIVIGGQNFGCGSSREHAVVTLGAAGVRAVIAQSYARIFFRNCVSTGQLLPVVSNAR 123
Query: 189 LCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLGPVIDAGGIFAYARKTGMIASR 247
LC++ TGDVV I + E + + + ++P+G+L +++AGG+FAYAR G I +R
Sbjct: 124 LCDQVKTGDVVEIVVDEQVVRCESGVADAPIEPVGELANIVEAGGLFAYARAVGKIPAR 182
>gi|290474491|ref|YP_003467371.1| 3-isopropylmalate dehydratase small subunit [Xenorhabdus bovienii
SS-2004]
gi|289173804|emb|CBJ80586.1| 3-isopropylmalate dehydratase small subunit 1 (Isopropylmalate
isomerase 1) (Alpha-IPM isomerase 1) (IPMI 1)
[Xenorhabdus bovienii SS-2004]
Length = 183
Score = 186 bits (473), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 91/175 (52%), Positives = 121/175 (69%), Gaps = 1/175 (0%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
G YV+ DNIDTDQI+ AEYL + PS P+ Y +L S A+ GLP + FIDE + K
Sbjct: 9 IRGTVYVLTDNIDTDQILTAEYLKVNPSTPEGYAQLASLAMCGLPEG-SLPFIDEEQGKA 67
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
KY II+AG NFGCGSSREHA ALGA+G AV+A+SYARIFFRN V+TGE+ P+ ++ RL
Sbjct: 68 KYPIIVAGQNFGCGSSREHAVAALGASGVKAVLAQSYARIFFRNCVSTGELLPVAAQERL 127
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLGPVIDAGGIFAYARKTGMI 244
C++ TGD + I+I + ++Y P+G+L ++ AGG+F+YAR TG I
Sbjct: 128 CDKLVTGDRIEIDIENQTVTLLENSEKYPTDPVGELANIVAAGGLFSYARMTGRI 182
>gi|188535169|ref|YP_001908966.1| 3-isopropylmalate dehydratase small subunit [Erwinia tasmaniensis
Et1/99]
gi|188030211|emb|CAO98097.1| 3-isopropylmalate dehydratase small subunit [Erwinia tasmaniensis
Et1/99]
Length = 182
Score = 183 bits (465), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 91/177 (51%), Positives = 119/177 (67%), Gaps = 1/177 (0%)
Query: 68 ATFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENET 127
A G YV+GDNIDTDQI+ AEYL + PS P+ Y +L A+ GLP FID
Sbjct: 3 AMISGAVYVLGDNIDTDQILSAEYLKVNPSTPEGYAQLARLAMCGLPEG-ALPFIDPQTG 61
Query: 128 KTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEA 187
++ Y II+AG NFGCGSSREHA VALGAAG AV+A+SYARIFFRN VATGE+ P+ +
Sbjct: 62 RSAYPIIVAGKNFGCGSSREHAVVALGAAGVQAVIAQSYARIFFRNCVATGELLPVAAAE 121
Query: 188 RLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLGPVIDAGGIFAYARKTGMI 244
LC+ TGD V+I+I + + +G+ P+G+L ++ AGG+FA+AR +G I
Sbjct: 122 PLCQRLRTGDRVSIDIGKQTITLLESGERLMTDPLGELANMVAAGGLFAWARASGRI 178
>gi|397689236|ref|YP_006526490.1| 3-isopropylmalate dehydratase, small subunit [Melioribacter roseus
P3M]
gi|395810728|gb|AFN73477.1| 3-isopropylmalate dehydratase, small subunit, putative
[Melioribacter roseus P3M]
Length = 185
Score = 181 bits (460), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 87/179 (48%), Positives = 123/179 (68%), Gaps = 6/179 (3%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYT------TRFIDEN 125
G +V+GDNIDTDQIIPAE+L S+P+E + G +AL G+P + + F+DE
Sbjct: 7 GRAFVLGDNIDTDQIIPAEHLVYSLSDPEESKNYGRFALSGVPLSQSGLPKGGIPFVDEG 66
Query: 126 ETKTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDS 185
+ +TKY+III G NFGCGSSREHAP AL AG A++AESYARIF+RN V G + P ++
Sbjct: 67 QYQTKYQIIIGGSNFGCGSSREHAPFALQVAGAKAIIAESYARIFYRNCVDGGFVVPYET 126
Query: 186 EARLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLGPVIDAGGIFAYARKTGMI 244
+L ++ TGD + +++ + L N T + Y+L+P+GD+ P+I+AG IF YAR+ MI
Sbjct: 127 SQKLNDKIETGDELELDLNGNTLRNLTKNETYQLRPLGDILPIIEAGNIFEYARQNNMI 185
>gi|373456602|ref|ZP_09548369.1| 3-isopropylmalate dehydratase, small subunit [Caldithrix abyssi DSM
13497]
gi|371718266|gb|EHO40037.1| 3-isopropylmalate dehydratase, small subunit [Caldithrix abyssi DSM
13497]
Length = 186
Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 91/180 (50%), Positives = 120/180 (66%), Gaps = 6/180 (3%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYT------TRFIDEN 125
G YV+GDNIDTDQIIPAE+L S+P E G +AL G+P FI +
Sbjct: 7 GKVYVLGDNIDTDQIIPAEHLVYSLSDPKEARMYGHFALSGVPPEKAGLPQGRIPFIKGD 66
Query: 126 ETKTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDS 185
+ K+++ I++AG NFGCGSSREHAP AL AG AVVAESYARIF+RNSV G + PL+S
Sbjct: 67 DHKSEFTILVAGANFGCGSSREHAPFALQVAGVQAVVAESYARIFYRNSVDGGFLVPLES 126
Query: 186 EARLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLGPVIDAGGIFAYARKTGMIA 245
E ++ + TG+ V ++I + G+ +KLK GD+ P+I+AGG+F YARKTGMI+
Sbjct: 127 EGKINQHFETGEEVEVDIERQSITRLRDGQRFKLKHPGDVLPIIEAGGLFKYARKTGMIS 186
>gi|268316309|ref|YP_003290028.1| 3-isopropylmalate dehydratase small subunit [Rhodothermus marinus
DSM 4252]
gi|262333843|gb|ACY47640.1| 3-isopropylmalate dehydratase, small subunit [Rhodothermus marinus
DSM 4252]
Length = 189
Score = 180 bits (456), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 88/180 (48%), Positives = 122/180 (67%), Gaps = 6/180 (3%)
Query: 71 HGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATY------TTRFIDE 124
GL YVVGD+IDTDQIIPA++L + P+E G YAL G+PA F +
Sbjct: 6 RGLAYVVGDSIDTDQIIPAQHLVYSLTRPEERRLYGRYALSGVPAEGQGLPFGNIPFTEP 65
Query: 125 NETKTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLD 184
+ K+++KI++AG NFGCGSSREHAP AL AGC AVVAESYARIF+RN++ G + P +
Sbjct: 66 DAYKSRFKIVVAGKNFGCGSSREHAPFALQEAGCEAVVAESYARIFYRNAIDGGFVVPFE 125
Query: 185 SEARLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLGPVIDAGGIFAYARKTGMI 244
+ RL ++ TGD + I+ ++L N TTG+E+ L P+G++ ++ AG +F YARK G+I
Sbjct: 126 TPVRLIDKIRTGDELEIDTRLAKLTNLTTGEEFLLHPLGEVAEILRAGNLFEYARKAGLI 185
>gi|345303976|ref|YP_004825878.1| 3-isopropylmalate dehydratase small subunit [Rhodothermus marinus
SG0.5JP17-172]
gi|345113209|gb|AEN74041.1| 3-isopropylmalate dehydratase, small subunit [Rhodothermus marinus
SG0.5JP17-172]
Length = 189
Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 87/180 (48%), Positives = 121/180 (67%), Gaps = 6/180 (3%)
Query: 71 HGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATY------TTRFIDE 124
GL YVVGD+IDTDQIIPA++L + P+E G YAL G+P F +
Sbjct: 6 RGLAYVVGDSIDTDQIIPAQHLVYSLTRPEERRLYGRYALSGVPTEGQGLPFGNIPFTEP 65
Query: 125 NETKTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLD 184
+ K+++KI++AG NFGCGSSREHAP AL AGC AVVAESYARIF+RN++ G + P +
Sbjct: 66 DAYKSRFKIVVAGKNFGCGSSREHAPFALQEAGCEAVVAESYARIFYRNAIDGGFVVPFE 125
Query: 185 SEARLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLGPVIDAGGIFAYARKTGMI 244
+ RL ++ TGD + I+ ++L N TTG+E+ L P+G++ ++ AG +F YARK G+I
Sbjct: 126 TPVRLIDKIRTGDELEIDTRLAKLTNLTTGEEFLLHPLGEVAEILRAGNLFEYARKAGLI 185
>gi|149199678|ref|ZP_01876710.1| 3-isopropylmalate dehydratase, small subunit [Lentisphaera araneosa
HTCC2155]
gi|149137195|gb|EDM25616.1| 3-isopropylmalate dehydratase, small subunit [Lentisphaera araneosa
HTCC2155]
Length = 183
Score = 177 bits (448), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 86/177 (48%), Positives = 122/177 (68%), Gaps = 7/177 (3%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYT------TRFIDEN 125
G +V+GDNIDTDQIIPA+YL+ PSNP+E + G +AL G+P + R++ E
Sbjct: 7 GKAFVLGDNIDTDQIIPAKYLSYDPSNPEEKKYFGKFALFGVPEGESGYPGGDIRYVSEG 66
Query: 126 ETKTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDS 185
++ Y IIIAG NFGCGSSREHAP AL AG VVA+S+ARI+FRNSV G + P ++
Sbjct: 67 -FESDYNIIIAGENFGCGSSREHAPFALAEAGAEIVVAQSFARIYFRNSVNGGYLVPSET 125
Query: 186 EARLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLGPVIDAGGIFAYARKTG 242
++ EE +TG+ + I + ++L N T+GKEY L P+GD+ +++AG +F YA++ G
Sbjct: 126 PVKINEEIATGEEIEINLDNNKLKNLTSGKEYDLNPLGDIKAIMEAGDVFKYAKQMG 182
>gi|193215331|ref|YP_001996530.1| 3-isopropylmalate dehydratase small subunit [Chloroherpeton
thalassium ATCC 35110]
gi|193088808|gb|ACF14083.1| 3-isopropylmalate dehydratase, small subunit [Chloroherpeton
thalassium ATCC 35110]
Length = 186
Score = 177 bits (448), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 88/180 (48%), Positives = 119/180 (66%), Gaps = 6/180 (3%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATY------TTRFIDEN 125
G YV+G+NIDTDQIIPAE+L ++P+E + G YAL G+P FI+
Sbjct: 7 GKAYVLGNNIDTDQIIPAEHLVYSLTDPEELKNYGRYALSGVPPVQGGLPDGNIPFINGE 66
Query: 126 ETKTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDS 185
+++Y III G NFGCGSSREHAP AL AG A++AESYARIF+RNSV G + P ++
Sbjct: 67 NYESEYSIIIGGSNFGCGSSREHAPFALQVAGVKAIIAESYARIFYRNSVDGGFVVPCEA 126
Query: 186 EARLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLGPVIDAGGIFAYARKTGMIA 245
++ ++ TGD V I +AE L N T GK Y L P+GD+ +++AGGIF YARK +++
Sbjct: 127 TEKINDKIKTGDEVEINVAEKTLTNLTDGKTYALNPLGDVLSIVEAGGIFEYARKNALLS 186
>gi|78189854|ref|YP_380192.1| 3-isopropylmalate dehydratase, small subunit [Chlorobium
chlorochromatii CaD3]
gi|78172053|gb|ABB29149.1| 3-isopropylmalate dehydratase, small subunit [Chlorobium
chlorochromatii CaD3]
Length = 188
Score = 176 bits (445), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 91/183 (49%), Positives = 115/183 (62%), Gaps = 6/183 (3%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATY------TTRFID 123
G YV+G NIDTDQIIPAE+L S+P E G YAL G+P F+
Sbjct: 5 IQGKAYVLGKNIDTDQIIPAEHLVYSLSDPKEVVLYGKYALSGVPPEQGGLPQGNIPFVR 64
Query: 124 ENETKTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPL 183
E E + Y II+AG NFGCGSSREHAP AL AG A+VAESYARIF+RN V G + P
Sbjct: 65 EGEVTSDYTIIVAGANFGCGSSREHAPFALQVAGAKAIVAESYARIFYRNCVDGGFVIPC 124
Query: 184 DSEARLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLGPVIDAGGIFAYARKTGM 243
+S L + STGD + I++ + L N TT K YKL P+G + +++AGGIFAYA+K +
Sbjct: 125 ESTESLAQAVSTGDELKIDVMANTLENLTTKKSYKLNPLGSVFSIVEAGGIFAYAKKENL 184
Query: 244 IAS 246
+A
Sbjct: 185 MAQ 187
>gi|168701543|ref|ZP_02733820.1| 3-isopropylmalate dehydratase, small subunit, putative [Gemmata
obscuriglobus UQM 2246]
Length = 189
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 96/184 (52%), Positives = 125/184 (67%), Gaps = 8/184 (4%)
Query: 71 HGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLP--------ATYTTRFI 122
G+ YV+GDNIDTDQIIPA+YLT PS P EY+ G YAL G+P
Sbjct: 6 EGVAYVLGDNIDTDQIIPAQYLTFNPSIPAEYKMFGKYALCGVPEAAAGLPKGNVPFHTP 65
Query: 123 DENETKTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYP 182
+E YKI+I G NFGCGSSREHAP+AL AAG AVVAE YARIF+RNSV G + P
Sbjct: 66 GGDEFVAPYKIVIGGKNFGCGSSREHAPIALAAAGVVAVVAEFYARIFYRNSVNGGYLVP 125
Query: 183 LDSEARLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLGPVIDAGGIFAYARKTG 242
L+++ARL + TGD + I+IA L N T+G+ ++L P+G++ P+++AGG+F YA+K G
Sbjct: 126 LEAKARLIDRVCTGDKLVIDIATGTLTNETSGETFELLPLGEVAPILEAGGLFPYAKKVG 185
Query: 243 MIAS 246
M+A
Sbjct: 186 MLAK 189
>gi|78186483|ref|YP_374526.1| 3-isopropylmalate dehydratase, small subunit [Chlorobium luteolum
DSM 273]
gi|78166385|gb|ABB23483.1| 3-isopropylmalate dehydratase, small subunit [Chlorobium luteolum
DSM 273]
Length = 190
Score = 174 bits (440), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 90/180 (50%), Positives = 115/180 (63%), Gaps = 6/180 (3%)
Query: 71 HGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYT------TRFIDE 124
G +V+G NIDTDQIIPAE+L S+P+E + G YAL G+P + F+ E
Sbjct: 6 QGKAFVLGKNIDTDQIIPAEHLVYSLSDPEEVKLYGKYALSGVPPAQSGLPEGNIPFVRE 65
Query: 125 NETKTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLD 184
K+ Y IIIA NFGCGSSREHAP AL AG A+VAESYARIFFRN V G + P +
Sbjct: 66 GSFKSDYTIIIAAENFGCGSSREHAPFALQVAGVKAIVAESYARIFFRNCVDGGFVIPYE 125
Query: 185 SEARLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLGPVIDAGGIFAYARKTGMI 244
+ L E TGD + I+I + L N T GK Y L P+GD+ +++AGGIFAYAR+ ++
Sbjct: 126 TAEHLAEVVKTGDELKIDIKANTLENLTAGKTYTLNPLGDVFSIVEAGGIFAYARQENLM 185
>gi|21673448|ref|NP_661513.1| 3-isopropylmalate dehydratase small subunit [Chlorobium tepidum
TLS]
gi|21646551|gb|AAM71855.1| 3-isopropylmalate dehydratase, small subunit, putative [Chlorobium
tepidum TLS]
Length = 190
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 87/182 (47%), Positives = 117/182 (64%), Gaps = 6/182 (3%)
Query: 71 HGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATY------TTRFIDE 124
G YV+G NIDTDQIIPAE+L S+P+E + G YAL G+P F++E
Sbjct: 6 QGKAYVLGKNIDTDQIIPAEHLVYSLSDPEEVKMYGKYALSGVPIDQAGLPEGNIPFVEE 65
Query: 125 NETKTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLD 184
E + Y IIIAG NFGCGSSREHAP AL AG A++AESYARIF+RN V G + P +
Sbjct: 66 GEFTSPYSIIIAGPNFGCGSSREHAPFALKVAGAKAIIAESYARIFYRNCVDGGFVIPFE 125
Query: 185 SEARLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLGPVIDAGGIFAYARKTGMI 244
+ L + TGD +++++ + L N T Y+L+P+GD+ ++ AGGIF YARK ++
Sbjct: 126 TAQPLNKSIMTGDELSLDMENNTLTNLTQNITYELRPLGDVINIVQAGGIFEYARKNNLM 185
Query: 245 AS 246
AS
Sbjct: 186 AS 187
>gi|51209877|ref|YP_063541.1| 3-isopropylmalate dehydratase small subunit [Gracilaria
tenuistipitata var. liui]
gi|50657631|gb|AAT79616.1| 3-isopropylmalate dehydratase small subunit [Gracilaria
tenuistipitata var. liui]
Length = 189
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 82/173 (47%), Positives = 121/173 (69%), Gaps = 1/173 (0%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G Y++G++I+TDQI+ AEY+ + P+ + Y++LGS A+ GL + FID++ K+ Y
Sbjct: 8 GRVYILGNDINTDQILTAEYMKINPATKEGYQELGSLAMSGLSES-ELPFIDKSTGKSYY 66
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
II+AG NFGCGSSREHAP+ALGA+G AV+AES+ARIFFRN ++TGEI P+ L
Sbjct: 67 SIIVAGKNFGCGSSREHAPIALGASGIKAVIAESFARIFFRNCISTGEILPVQVSQNLYT 126
Query: 192 ECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLGPVIDAGGIFAYARKTGMI 244
+TGD++TI+ +++++I K +GDL +++AGG+F YARK I
Sbjct: 127 LLNTGDILTIQSSDNKIILPDKKNIINFKDLGDLVEIVNAGGLFNYARKINKI 179
>gi|145219981|ref|YP_001130690.1| 3-isopropylmalate dehydratase small subunit [Chlorobium
phaeovibrioides DSM 265]
gi|145206145|gb|ABP37188.1| 3-isopropylmalate dehydratase, small subunit [Chlorobium
phaeovibrioides DSM 265]
Length = 188
Score = 171 bits (432), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 86/182 (47%), Positives = 118/182 (64%), Gaps = 6/182 (3%)
Query: 71 HGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTR------FIDE 124
G +V+G NIDTDQIIPAE+L S+P+E + G +AL G+P + F+ E
Sbjct: 6 QGKAFVLGRNIDTDQIIPAEHLVYSLSDPEEVKLYGKFALSGVPLAQSGLPAGNIPFVQE 65
Query: 125 NETKTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLD 184
+ Y IIIAG NFGCGSSREHAP AL AG A++AESYARIF+RN V G + P +
Sbjct: 66 GSFASDYTIIIAGQNFGCGSSREHAPFALQVAGVKAIIAESYARIFYRNCVDGGFVIPYE 125
Query: 185 SEARLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLGPVIDAGGIFAYARKTGMI 244
+ +L E TGD + I+I + + N T+G+ Y+L +GD+ +++AGGIFAYARK ++
Sbjct: 126 TAIQLAETVKTGDELKIDIKANTVENLTSGETYQLNALGDVFNIVEAGGIFAYARKENLM 185
Query: 245 AS 246
A
Sbjct: 186 AQ 187
>gi|119356678|ref|YP_911322.1| 3-isopropylmalate dehydratase small subunit [Chlorobium
phaeobacteroides DSM 266]
gi|119354027|gb|ABL64898.1| 3-isopropylmalate dehydratase, small subunit [Chlorobium
phaeobacteroides DSM 266]
Length = 188
Score = 169 bits (428), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 87/184 (47%), Positives = 116/184 (63%), Gaps = 6/184 (3%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATY------TTRFID 123
G YV+G NIDTDQIIPAE+L S+P+E + G YAL G+P T F+
Sbjct: 5 IQGKAYVLGKNIDTDQIIPAEHLVYSLSDPEEVKLYGKYALSGVPPEQGGLPEGNTPFVS 64
Query: 124 ENETKTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPL 183
E + Y IIIAG NFGCGSSREHAP AL AG A+VAESYARIF+RN V G + P
Sbjct: 65 EGTCHSDYSIIIAGPNFGCGSSREHAPFALQVAGAKAIVAESYARIFYRNCVDGGFVIPY 124
Query: 184 DSEARLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLGPVIDAGGIFAYARKTGM 243
++ +L + TGD + I++ + L N T ++L P+GD+ ++ AGGIFAYAR+ +
Sbjct: 125 ETRQQLNQIIKTGDELKIDVEANTLTNVTENVTWQLNPLGDVINIVKAGGIFAYARQENL 184
Query: 244 IASR 247
+A+
Sbjct: 185 MANE 188
>gi|194333571|ref|YP_002015431.1| 3-isopropylmalate dehydratase small subunit [Prosthecochloris
aestuarii DSM 271]
gi|194311389|gb|ACF45784.1| 3-isopropylmalate dehydratase, small subunit [Prosthecochloris
aestuarii DSM 271]
Length = 186
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 86/184 (46%), Positives = 118/184 (64%), Gaps = 6/184 (3%)
Query: 68 ATFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATY------TTRF 121
+ G YV+G NIDTDQIIPAE+L S+P+E + G YAL G+P T F
Sbjct: 3 SIIQGKAYVLGKNIDTDQIIPAEHLVYSLSDPEEVKLYGKYALSGVPVAEAGLPEGNTPF 62
Query: 122 IDENETKTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIY 181
+ ++ +++Y IIIAG NFGCGSSREHAP AL AG A+VAESYARIF+RN V G +
Sbjct: 63 VADSSFESEYVIIIAGPNFGCGSSREHAPFALQVAGVKAIVAESYARIFYRNCVDGGFVI 122
Query: 182 PLDSEARLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLGPVIDAGGIFAYARKT 241
P ++ +L + TGD + I++ + + N T Y L P+GD+ ++ AGGIFAYAR+
Sbjct: 123 PYETSEQLNKSVLTGDELKIDVQNNTITNLTQNITYTLSPLGDVLEIVKAGGIFAYARQE 182
Query: 242 GMIA 245
++A
Sbjct: 183 NLMA 186
>gi|193212296|ref|YP_001998249.1| aconitate hydratase domain-containing protein [Chlorobaculum parvum
NCIB 8327]
gi|193085773|gb|ACF11049.1| aconitate hydratase domain protein [Chlorobaculum parvum NCIB 8327]
Length = 191
Score = 167 bits (424), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 84/182 (46%), Positives = 117/182 (64%), Gaps = 6/182 (3%)
Query: 71 HGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYT------TRFIDE 124
G YV+G NIDTDQIIPAE+L S+P+E + G YAL G+P F++E
Sbjct: 6 QGKAYVLGKNIDTDQIIPAEHLVYSLSDPEEVKLYGKYALSGVPLEQAGLPEGKIPFVEE 65
Query: 125 NETKTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLD 184
+ + Y II G NFGCGSSREHAP AL AG A++AESYARIF+RN V G + P +
Sbjct: 66 GQFTSPYSFIIGGPNFGCGSSREHAPFALKVAGAKAIIAESYARIFYRNCVDGGFVIPYE 125
Query: 185 SEARLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLGPVIDAGGIFAYARKTGMI 244
+ +L + TGD +++++ ++ L N T Y+L+P+GD+ ++ AGGIF YARK ++
Sbjct: 126 TTQQLNKTVMTGDELSLDMEKNTLTNLTQNITYELRPLGDVVNIVQAGGIFEYARKNDLM 185
Query: 245 AS 246
AS
Sbjct: 186 AS 187
>gi|194337202|ref|YP_002018996.1| 3-isopropylmalate dehydratase small subunit [Pelodictyon
phaeoclathratiforme BU-1]
gi|194309679|gb|ACF44379.1| 3-isopropylmalate dehydratase, small subunit [Pelodictyon
phaeoclathratiforme BU-1]
Length = 188
Score = 166 bits (421), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 88/180 (48%), Positives = 114/180 (63%), Gaps = 6/180 (3%)
Query: 71 HGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATY------TTRFIDE 124
G YV+G NIDTDQIIPAE+L S+P+E G YAL G+P FI+E
Sbjct: 6 QGKAYVLGKNIDTDQIIPAEHLVYSLSDPEEVILYGKYALSGVPPEQGGLPQGNILFIEE 65
Query: 125 NETKTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLD 184
+ Y IIIAG NFGCGSSREHAP AL AG A+VAESYARIF+RN V G P +
Sbjct: 66 GSCHSNYTIIIAGPNFGCGSSREHAPFALKVAGVKAIVAESYARIFYRNCVDGGFAIPYE 125
Query: 185 SEARLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLGPVIDAGGIFAYARKTGMI 244
S +L + TGD + I++ + + N T+ YKL P+GD+ +++AGGIFAYAR+ ++
Sbjct: 126 SAEQLNQLIKTGDELKIDVEANTIENLTSNITYKLNPLGDVFNIVEAGGIFAYARQENLM 185
>gi|451981316|ref|ZP_21929678.1| Isopropylmalate/citramalate isomerase small subunit [Nitrospina
gracilis 3/211]
gi|451761461|emb|CCQ90934.1| Isopropylmalate/citramalate isomerase small subunit [Nitrospina
gracilis 3/211]
Length = 187
Score = 166 bits (421), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 86/181 (47%), Positives = 118/181 (65%), Gaps = 7/181 (3%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATY------TTRFIDEN 125
G YV+G+NIDTDQIIPA++L S+P+E + G +AL G+P F++E
Sbjct: 7 GRAYVLGNNIDTDQIIPAQHLVYSLSDPEERKNYGKFALSGVPNEAAGLPQGNKPFVEEG 66
Query: 126 ETKTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDS 185
++ Y I+I G NFGCGSSREHAP + AG AVVAESYARIF+RNSV G PL++
Sbjct: 67 -FESPYTIVIGGKNFGCGSSREHAPACMEIAGVQAVVAESYARIFYRNSVDGGFFIPLET 125
Query: 186 EARLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLGPVIDAGGIFAYARKTGMIA 245
+ L ++ TGD + I++ + L N T Y L+P+GD+ +I+AG IF YARK+G+I
Sbjct: 126 KDPLTDKIQTGDELEIDLESNTLTNKTQNTTYPLQPLGDVIDIIEAGNIFEYARKSGLIQ 185
Query: 246 S 246
S
Sbjct: 186 S 186
>gi|310778958|ref|YP_003967291.1| 3-isopropylmalate dehydratase small subunit [Ilyobacter polytropus
DSM 2926]
gi|309748281|gb|ADO82943.1| 3-isopropylmalate dehydratase, small subunit [Ilyobacter polytropus
DSM 2926]
Length = 179
Score = 166 bits (421), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 82/171 (47%), Positives = 114/171 (66%), Gaps = 2/171 (1%)
Query: 71 HGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTR--FIDENETK 128
G YV+GD+IDTDQIIPA YL +P+E + G YAL GLP F+ E E
Sbjct: 6 KGKVYVLGDDIDTDQIIPASYLVYRVDDPEESKLYGKYALSGLPVDIKKDSPFVKEGEFT 65
Query: 129 TKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEAR 188
+ Y +++AG NFGCGSSREHAP+ L AG AV+AESYARIF+RN++ + P +S A+
Sbjct: 66 SDYTVVLAGKNFGCGSSREHAPLCLEKAGVKAVIAESYARIFYRNAIDGAFLVPYESAAK 125
Query: 189 LCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLGPVIDAGGIFAYAR 239
+ ++ STGD + ++ +S + N TTG+E+ LK +GD ++ AGGIF YA+
Sbjct: 126 IFDKFSTGDEIELDGEKSTIKNLTTGEEFSLKSMGDAYEIVKAGGIFKYAK 176
>gi|189500652|ref|YP_001960122.1| aconitate hydratase domain-containing protein [Chlorobium
phaeobacteroides BS1]
gi|189496093|gb|ACE04641.1| aconitate hydratase domain protein [Chlorobium phaeobacteroides
BS1]
Length = 187
Score = 166 bits (420), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 87/182 (47%), Positives = 117/182 (64%), Gaps = 6/182 (3%)
Query: 71 HGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTR------FIDE 124
G YV+G NIDTDQIIPAE+L S+P+E + G YAL G+P F+ E
Sbjct: 6 QGKAYVLGKNIDTDQIIPAEHLVYSLSDPEEVKLYGRYALSGVPVDEAGLPEGGHPFVAE 65
Query: 125 NETKTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLD 184
+ ++ Y IIIAG NFGCGSSREHAP +L AG A+VAESYARIF+RN V G + P +
Sbjct: 66 DRFESDYSIIIAGPNFGCGSSREHAPFSLQVAGVRAIVAESYARIFYRNCVDGGFVIPYE 125
Query: 185 SEARLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLGPVIDAGGIFAYARKTGMI 244
+ +L + TGD + I+I ++ + N T G Y+L P+GD+ ++ AGGIF YAR+ +I
Sbjct: 126 TAEQLNKTVLTGDDLKIDIEKNTITNLTQGITYELNPLGDVFNIVMAGGIFEYARQNNII 185
Query: 245 AS 246
S
Sbjct: 186 NS 187
>gi|269118752|ref|YP_003306929.1| 3-isopropylmalate dehydratase small subunit [Sebaldella termitidis
ATCC 33386]
gi|268612630|gb|ACZ06998.1| 3-isopropylmalate dehydratase, small subunit [Sebaldella termitidis
ATCC 33386]
Length = 181
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 83/175 (47%), Positives = 116/175 (66%), Gaps = 2/175 (1%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTR--FIDENETKT 129
G YV+GDNIDTDQIIPA +L +P+E + G YA+ GLPA FI + E +
Sbjct: 7 GKVYVLGDNIDTDQIIPAMHLVYKIDDPEEVKLYGKYAMSGLPADIAGDKPFIKDGEYTS 66
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
+Y +++AG NFGCGSSREHAP+AL AG AVVAE YARIF+RNSV G + P ++ A +
Sbjct: 67 EYVVMVAGKNFGCGSSREHAPLALEKAGIKAVVAEDYARIFYRNSVDGGFLVPFETPASI 126
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLGPVIDAGGIFAYARKTGMI 244
E +T D V I++ + + N T G+ ++L+ +GD+ +I+AGG+F YA+ I
Sbjct: 127 KESFATDDEVEIDVEKGTITNITKGQTFELRSLGDVKDIIEAGGLFNYAKNNKNI 181
>gi|110598382|ref|ZP_01386655.1| 3-isopropylmalate dehydratase, small subunit, archaeal like
[Chlorobium ferrooxidans DSM 13031]
gi|110339991|gb|EAT58493.1| 3-isopropylmalate dehydratase, small subunit, archaeal like
[Chlorobium ferrooxidans DSM 13031]
Length = 188
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 87/182 (47%), Positives = 114/182 (62%), Gaps = 6/182 (3%)
Query: 71 HGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATY------TTRFIDE 124
G YV+G NIDTDQIIPAE+L S+P+E + G YAL G+P FI E
Sbjct: 6 QGKAYVLGKNIDTDQIIPAEHLVYSLSDPEEVKLYGKYALSGVPPEQGGLPEGNIPFIRE 65
Query: 125 NETKTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLD 184
E + Y IIIAG NFGCGSSREHAP AL AG A++AESYARIF+RN V G + P +
Sbjct: 66 GEFSSDYTIIIAGPNFGCGSSREHAPFALKVAGAKAIIAESYARIFYRNCVDGGFVIPYE 125
Query: 185 SEARLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLGPVIDAGGIFAYARKTGMI 244
+ L + TGD + I++ + + N + YKL +GD+ +I+AGGIFAYAR+ ++
Sbjct: 126 TAEELNQVIKTGDELKIDVKANTIENLSRQVTYKLSALGDVFSIIEAGGIFAYARQENLM 185
Query: 245 AS 246
A
Sbjct: 186 AQ 187
>gi|189346267|ref|YP_001942796.1| 3-isopropylmalate dehydratase small subunit [Chlorobium limicola
DSM 245]
gi|189340414|gb|ACD89817.1| 3-isopropylmalate dehydratase, small subunit [Chlorobium limicola
DSM 245]
Length = 188
Score = 160 bits (405), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 85/182 (46%), Positives = 111/182 (60%), Gaps = 6/182 (3%)
Query: 71 HGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATY------TTRFIDE 124
G YV+G NIDTDQIIPAE+L S+P+E + G YAL G+P F+ E
Sbjct: 6 QGKAYVLGKNIDTDQIIPAEHLVYSLSDPEEVKLYGKYALSGVPPEQGGLPQGDIPFVTE 65
Query: 125 NETKTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLD 184
+ Y II+AG NFGCGSSREHAP AL AG A+VAESYARIF+RN V G + P +
Sbjct: 66 GSFHSDYTIIVAGPNFGCGSSREHAPFALQVAGAKAIVAESYARIFYRNCVDGGFVIPYE 125
Query: 185 SEARLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLGPVIDAGGIFAYARKTGMI 244
+ L TGD + I+I + + N T + L P+GD+ ++ AGGIFAYAR+ ++
Sbjct: 126 TSVPLTGVIKTGDELKIDIEANTVTNLETNITFTLNPLGDVFSIVRAGGIFAYARQENLM 185
Query: 245 AS 246
A
Sbjct: 186 AQ 187
>gi|354724805|ref|ZP_09039020.1| 3-isopropylmalate dehydratase small subunit [Enterobacter mori LMG
25706]
Length = 179
Score = 157 bits (398), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 86/180 (47%), Positives = 115/180 (63%), Gaps = 12/180 (6%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
G YV+GDNIDTDQI+ AEYL + P++ + E+L + A+ GLP FI+ +
Sbjct: 7 MRGTVYVLGDNIDTDQILTAEYLKINPASAEGREELATLAMCGLPEG-ALPFINPQTQRA 65
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
Y I+AG NFGCGSSREHA VALGA+G AVVA+S+ARIFFRN V+TG+I P+ L
Sbjct: 66 GYDFIVAGKNFGCGSSREHAVVALGASGVKAVVAQSFARIFFRNCVSTGQIMPV----TL 121
Query: 190 CEECS-----TGDVVTIEIAESRLINHTTGKEYKLKPIGDLGPVIDAGGIFAYARKTGMI 244
E C TGD + I++ ++ T K P+G+L ++ AGG+FAYAR+TG I
Sbjct: 122 NEGCDIRALKTGDTIEIDLDAHQI--ATADGILKTAPVGELANIVAAGGLFAYARQTGKI 179
>gi|296104306|ref|YP_003614452.1| 3-isopropylmalate dehydratase small subunit [Enterobacter cloacae
subsp. cloacae ATCC 13047]
gi|295058765|gb|ADF63503.1| 3-isopropylmalate dehydratase small subunit [Enterobacter cloacae
subsp. cloacae ATCC 13047]
Length = 179
Score = 157 bits (397), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 86/180 (47%), Positives = 115/180 (63%), Gaps = 12/180 (6%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
G YV+GDNIDTDQI+ AEYL + P++ + E+L + A+ GLP FI+ +
Sbjct: 7 MRGTVYVLGDNIDTDQILTAEYLKINPASAEGREELATLAMCGLPEG-ALPFINPQTQRA 65
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
Y I+AG NFGCGSSREHA VALGA+G AVVA+S+ARIFFRN V+TG+I P+ L
Sbjct: 66 GYDFIVAGKNFGCGSSREHAVVALGASGVKAVVAQSFARIFFRNCVSTGQIMPV----TL 121
Query: 190 CEECS-----TGDVVTIEIAESRLINHTTGKEYKLKPIGDLGPVIDAGGIFAYARKTGMI 244
E C TGD + I++ ++ T K P+G+L ++ AGG+FAYAR+TG I
Sbjct: 122 NEGCDIRALKTGDTIEIDLDAHQI--GTADGILKTAPVGELANIVAAGGLFAYARQTGKI 179
>gi|225849350|ref|YP_002729514.1| 3-isopropylmalate dehydratase small subunit [Sulfurihydrogenibium
azorense Az-Fu1]
gi|225643414|gb|ACN98464.1| 3-isopropylmalate dehydratase, small subunit [Sulfurihydrogenibium
azorense Az-Fu1]
Length = 165
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/172 (41%), Positives = 105/172 (61%), Gaps = 15/172 (8%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
G + D++DTDQIIPA YL V ++P E L + + T+ ++ + +
Sbjct: 2 IRGRVWKFKDDVDTDQIIPARYL--VTTDPKE---LAKHVMEDADPTFPSKVKEGD---- 52
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
I++AG NFGCGSSREHAP+A+ AG SAVVAES+ARIFFRN++ G + EA
Sbjct: 53 ---ILVAGKNFGCGSSREHAPLAIKGAGISAVVAESFARIFFRNAINLGLLIIESPEA-- 107
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPI-GDLGPVIDAGGIFAYARK 240
+E GD + I++ E + N T GKEYK+KP+ +L ++ AGG+ YA++
Sbjct: 108 AKEAEEGDTLEIDVNEGIIRNLTKGKEYKIKPLPENLQAILKAGGLMEYAKE 159
>gi|386811414|ref|ZP_10098640.1| 3-isopropylmalate dehydratase small subunit [planctomycete KSU-1]
gi|386406138|dbj|GAB61521.1| 3-isopropylmalate dehydratase small subunit [planctomycete KSU-1]
Length = 167
Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 69/173 (39%), Positives = 102/173 (58%), Gaps = 19/173 (10%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G C+ GDNI+TD+IIPA YL + N E A++ ID N K
Sbjct: 3 GTCWKFGDNINTDEIIPARYLNTI--NTKEL------------ASHCMEDIDPNFIKKAK 48
Query: 132 --KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
+I+AG NFGCGSSREHAP+A+ AAG S V+A+S+ARIFFRN++ G P+
Sbjct: 49 GGDVIVAGDNFGCGSSREHAPIAIKAAGISCVIAKSFARIFFRNAINIG--LPIFECPEA 106
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPI-GDLGPVIDAGGIFAYARKT 241
E+ GD + I++A + ++NHT+ K++K +P ++ +I AGG+ + +K
Sbjct: 107 VEQIQEGDEIEIDLATAEILNHTSKKKFKFEPFPREMQEIIQAGGLMNFVKKN 159
>gi|386284674|ref|ZP_10061893.1| 3-isopropylmalate dehydratase small subunit [Sulfurovum sp. AR]
gi|385344077|gb|EIF50794.1| 3-isopropylmalate dehydratase small subunit [Sulfurovum sp. AR]
Length = 167
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/172 (42%), Positives = 100/172 (58%), Gaps = 16/172 (9%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
G + GDNIDTD II A YL N E +L Y + + ++ T
Sbjct: 1 MQGKVWKFGDNIDTDLIIAARYL-----NTSEPSELAKYVMEDADPEFVSKM-------T 48
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
+ II+AG NFGCGSSREHAP+AL AAG SAV+A ++ARIF+RN+ G P+ E +
Sbjct: 49 EGDIIVAGENFGCGSSREHAPIALKAAGVSAVIAPTFARIFYRNAFNMG--LPI-FELKE 105
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
E + GDVV I++ +IN T K YK PI + + ++DAGG+ A+A+K
Sbjct: 106 ASEINEGDVVRIDMDAGEVINVTQAKTYKFSPIPEFMQELVDAGGLIAFAKK 157
>gi|188996286|ref|YP_001930537.1| 3-isopropylmalate dehydratase, small subunit [Sulfurihydrogenibium
sp. YO3AOP1]
gi|237756994|ref|ZP_04585452.1| 3-isopropylmalate dehydratase, small subunit [Sulfurihydrogenibium
yellowstonense SS-5]
gi|188931353|gb|ACD65983.1| 3-isopropylmalate dehydratase, small subunit [Sulfurihydrogenibium
sp. YO3AOP1]
gi|237690848|gb|EEP59998.1| 3-isopropylmalate dehydratase, small subunit [Sulfurihydrogenibium
yellowstonense SS-5]
Length = 165
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/173 (40%), Positives = 104/173 (60%), Gaps = 15/173 (8%)
Query: 69 TFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETK 128
G + D++DTDQIIPA YL V ++P E L + + T+ ++ + +
Sbjct: 1 MIRGRVWKFKDDVDTDQIIPARYL--VTTDPKE---LAKHVMEDADPTFPSKVKEGD--- 52
Query: 129 TKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEAR 188
I++AG NFGCGSSREHAP+A+ AG +AVVAES+ARIFFRN++ G + EA
Sbjct: 53 ----ILVAGKNFGCGSSREHAPLAIKGAGIAAVVAESFARIFFRNAINLGLLIIESPEA- 107
Query: 189 LCEECSTGDVVTIEIAESRLINHTTGKEYKLKPI-GDLGPVIDAGGIFAYARK 240
E GD++ I+I + + N T KEYK+KP+ +L ++ AGG+ YA++
Sbjct: 108 -AREAEEGDILEIDINQGVIRNVTKNKEYKIKPLPENLQAILKAGGLMEYAKE 159
>gi|206889184|ref|YP_002247967.1| 3-isopropylmalate dehydratase, small subunit [Thermodesulfovibrio
yellowstonii DSM 11347]
gi|226736086|sp|B5YHE5.1|LEUD_THEYD RecName: Full=3-isopropylmalate dehydratase small subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|206741122|gb|ACI20179.1| 3-isopropylmalate dehydratase, small subunit [Thermodesulfovibrio
yellowstonii DSM 11347]
Length = 168
Score = 124 bits (310), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 72/170 (42%), Positives = 100/170 (58%), Gaps = 15/170 (8%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + GDNIDTD IIPA YL S+P E L + + +++ ++
Sbjct: 5 GKVWKFGDNIDTDAIIPARYLNT--SDPKE---LAKHVMEDADSSFPSKV-------KPG 52
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
IIIAG NFGCGSSREHAP+A+ A+G AV+A+SYARIFFRN+ G P+ L +
Sbjct: 53 DIIIAGRNFGCGSSREHAPIAIKASGIRAVIAKSYARIFFRNAFNIG--LPIFEVPELID 110
Query: 192 ECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
E + GD V I++ ++IN T GK+Y KPI + +I AGG+ + +K
Sbjct: 111 ETNEGDEVEIDMNSGQIINLTKGKKYNTKPIPPFMQELIKAGGLVEWTKK 160
>gi|329766313|ref|ZP_08257860.1| 3-isopropylmalate dehydratase, small subunit [Candidatus
Nitrosoarchaeum limnia SFB1]
gi|393796013|ref|ZP_10379377.1| 3-isopropylmalate dehydratase small subunit [Candidatus
Nitrosoarchaeum limnia BG20]
gi|329137215|gb|EGG41504.1| 3-isopropylmalate dehydratase, small subunit [Candidatus
Nitrosoarchaeum limnia SFB1]
Length = 161
Score = 123 bits (308), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 65/160 (40%), Positives = 101/160 (63%), Gaps = 13/160 (8%)
Query: 79 DNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKIIIAGG 138
DNIDTD IIP +YL + +Y +L ++A+ GL + ++ + E + I++G
Sbjct: 11 DNIDTDVIIPGQYLKV-----HDYAELATHAMEGLDPDFHSK-VKEGD------FILSGR 58
Query: 139 NFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEECSTGDV 198
NFGCGSSREHAP+AL +G AV+A S+ARIF+RN+V + P++ + + S GD
Sbjct: 59 NFGCGSSREHAPIALSHSGIKAVLALSFARIFYRNAVDGAFLLPIEIDQDAYSDISEGDQ 118
Query: 199 VTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAY 237
+ I+I +++ N T K YK+KP + +G +I+AGG+F Y
Sbjct: 119 IDIDIKTNQINNLTKNKTYKMKPFSEIIGKIIEAGGLFKY 158
>gi|161527929|ref|YP_001581755.1| 3-isopropylmalate dehydratase small subunit [Nitrosopumilus
maritimus SCM1]
gi|160339230|gb|ABX12317.1| 3-isopropylmalate dehydratase, small subunit [Nitrosopumilus
maritimus SCM1]
Length = 160
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/160 (41%), Positives = 101/160 (63%), Gaps = 13/160 (8%)
Query: 79 DNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKIIIAGG 138
DNIDTD IIP +YL + +Y +L ++A+ GL + ++ + E + I++G
Sbjct: 11 DNIDTDVIIPGQYLKV-----HDYAELATHAMEGLDPDFHSK-VKEGD------FILSGK 58
Query: 139 NFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEECSTGDV 198
NFGCGSSREHAP+AL +G AV+A S+ARIF+RNSV + P++ E S GD
Sbjct: 59 NFGCGSSREHAPIALSHSGVKAVLALSFARIFYRNSVDGAFLLPIEIEEDAYNGISEGDE 118
Query: 199 VTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAY 237
+ I+I+++ + N T + YK+KP + +G +I+AGG+F Y
Sbjct: 119 IDIDISKNEINNLTKNQTYKMKPFSEIIGKIIEAGGLFNY 158
>gi|325295353|ref|YP_004281867.1| 3-isopropylmalate dehydratase small subunit [Desulfurobacterium
thermolithotrophum DSM 11699]
gi|325065801|gb|ADY73808.1| 3-isopropylmalate dehydratase small subunit [Desulfurobacterium
thermolithotrophum DSM 11699]
Length = 167
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/175 (40%), Positives = 99/175 (56%), Gaps = 15/175 (8%)
Query: 67 TATFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENE 126
+ F G + GD+I+TD+IIPA YL N E +L + + + +
Sbjct: 2 SEIFKGRAFKFGDDINTDEIIPARYL-----NTSEPSELAKHVMEDADPEFPQKV----- 51
Query: 127 TKTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSE 186
K II+AG NFGCGSSREHAP+A+ AAG SAV+A+S+ARIF+RN++ G P+
Sbjct: 52 --QKGDIIVAGKNFGCGSSREHAPIAIKAAGVSAVIAKSFARIFYRNAINIG--LPIFES 107
Query: 187 ARLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPI-GDLGPVIDAGGIFAYARK 240
+ E GD+V I + N T G EYK PI D+ ++DAGG+ YA++
Sbjct: 108 SEAVEGIEEGDIVEINPETGVIKNLTKGTEYKANPIPPDIRRIMDAGGLMEYAKQ 162
>gi|340344288|ref|ZP_08667420.1| 3-isopropylmalate dehydratase, small subunit [Candidatus
Nitrosoarchaeum koreensis MY1]
gi|339519429|gb|EGP93152.1| 3-isopropylmalate dehydratase, small subunit [Candidatus
Nitrosoarchaeum koreensis MY1]
Length = 161
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/160 (39%), Positives = 98/160 (61%), Gaps = 13/160 (8%)
Query: 79 DNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKIIIAGG 138
DNIDTD IIP +YL + +Y +L +A+ GL + ++ + I++G
Sbjct: 11 DNIDTDVIIPGQYLKV-----HDYAELAKHAMEGLDPDFHSK-------AKEGDFILSGR 58
Query: 139 NFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEECSTGDV 198
NFGCGSSREHAP+AL +G AV+A S+ARIF+RN+V + P++ + + + GD
Sbjct: 59 NFGCGSSREHAPIALAHSGIKAVLALSFARIFYRNAVDGAFLLPIEIDQDAYSDIAEGDQ 118
Query: 199 VTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAY 237
+ I++ +++ N T K YK+KP D +G +I+AGG+F Y
Sbjct: 119 IDIDLKSNQINNLTKNKTYKMKPFSDIIGKIIEAGGLFKY 158
>gi|407461946|ref|YP_006773263.1| 3-isopropylmalate dehydratase small subunit [Candidatus
Nitrosopumilus koreensis AR1]
gi|407045568|gb|AFS80321.1| 3-isopropylmalate dehydratase small subunit [Candidatus
Nitrosopumilus koreensis AR1]
Length = 160
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/160 (41%), Positives = 101/160 (63%), Gaps = 13/160 (8%)
Query: 79 DNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKIIIAGG 138
DNIDTD IIP +YL + +Y +L ++A+ GL + ++ + E + I++G
Sbjct: 11 DNIDTDVIIPGQYLKV-----HDYAELATHAMEGLDPDFHSK-VKEGD------FILSGK 58
Query: 139 NFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEECSTGDV 198
NFGCGSSREHAP+AL +G AV+A S+ARIF+RNSV + P++ E + S GD
Sbjct: 59 NFGCGSSREHAPIALSHSGVKAVLALSFARIFYRNSVDGAFLLPIEIEEDAYKGISEGDE 118
Query: 199 VTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAY 237
+ I+I ++ + N T + YK+KP + +G +I+AGG+F Y
Sbjct: 119 IDIDINKNEINNLTKNQTYKMKPFSEIIGKIIEAGGLFNY 158
>gi|407464308|ref|YP_006775190.1| 3-isopropylmalate dehydratase small subunit [Candidatus
Nitrosopumilus sp. AR2]
gi|407047496|gb|AFS82248.1| 3-isopropylmalate dehydratase small subunit [Candidatus
Nitrosopumilus sp. AR2]
Length = 163
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/160 (40%), Positives = 101/160 (63%), Gaps = 13/160 (8%)
Query: 79 DNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKIIIAGG 138
DNIDTD IIP +YL + +Y +L ++A+ GL + ++ + E + I++G
Sbjct: 11 DNIDTDVIIPGQYLKV-----HDYAELATHAMEGLDPDFHSK-VKEGD------FILSGK 58
Query: 139 NFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEECSTGDV 198
NFGCGSSREHAP+AL +G AV+A S+ARIF+RN+V + P++ E + S GD
Sbjct: 59 NFGCGSSREHAPIALSHSGIKAVLALSFARIFYRNAVDGAFLLPIEIEQDAYDGISDGDE 118
Query: 199 VTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAY 237
+TI+++ + + N T + YK+KP + +G +I AGG+F Y
Sbjct: 119 ITIDVSVNEIKNITKNQTYKMKPFSEIIGKIIAAGGLFKY 158
>gi|386876596|ref|ZP_10118695.1| 3-isopropylmalate dehydratase small subunit [Candidatus
Nitrosopumilus salaria BD31]
gi|386805558|gb|EIJ65078.1| 3-isopropylmalate dehydratase small subunit [Candidatus
Nitrosopumilus salaria BD31]
Length = 163
Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 65/160 (40%), Positives = 99/160 (61%), Gaps = 13/160 (8%)
Query: 79 DNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKIIIAGG 138
DNIDTD IIP +YL + +Y +L ++A+ GL + ++ + E + I++G
Sbjct: 11 DNIDTDVIIPGQYLKV-----HDYAELATHAMEGLDPDFHSK-VKEGD------FILSGK 58
Query: 139 NFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEECSTGDV 198
NFGCGSSREHAP+AL +G AV+A S+ARIF+RN+V + P++ + S GD
Sbjct: 59 NFGCGSSREHAPIALSHSGIKAVLALSFARIFYRNAVDGAFLLPIEIDQDAYNAISEGDE 118
Query: 199 VTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAY 237
+ I+IA + + N T + YK+KP + +G +I AGG+F Y
Sbjct: 119 IDIDIASNEIKNITKNQTYKMKPFSEIIGKIISAGGLFKY 158
>gi|319956367|ref|YP_004167630.1| 3-isopropylmalate dehydratase small subunit [Nitratifractor
salsuginis DSM 16511]
gi|319418771|gb|ADV45881.1| 3-isopropylmalate dehydratase, small subunit [Nitratifractor
salsuginis DSM 16511]
Length = 165
Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 69/173 (39%), Positives = 100/173 (57%), Gaps = 18/173 (10%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
G + GDNIDTD II A YL N E +L + + + ++
Sbjct: 1 MRGKAWKFGDNIDTDLIIAARYL-----NTSEPSELAKHVMEDADPEFVSKM-------E 48
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG-EIYPLDSEAR 188
II+AG NFGCGSSREHAP+AL AAG +AV+A ++ARIF+RN+ G I+ L
Sbjct: 49 PGDIIVAGENFGCGSSREHAPIALKAAGIAAVIAPTFARIFYRNAFNMGLPIFELPE--- 105
Query: 189 LCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
+E + GD+V I++ + +I+ TTGK YK PI + + ++DAGG+ YA++
Sbjct: 106 -ADEINEGDIVRIDMEKGEVIDETTGKHYKFNPIPEFMQELVDAGGLIEYAKR 157
>gi|334338966|ref|YP_004543946.1| 3-isopropylmalate dehydratase small subunit [Desulfotomaculum
ruminis DSM 2154]
gi|334090320|gb|AEG58660.1| 3-isopropylmalate dehydratase, small subunit [Desulfotomaculum
ruminis DSM 2154]
Length = 165
Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 70/171 (40%), Positives = 103/171 (60%), Gaps = 15/171 (8%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
G + G+++DTD II A YL S+P E L + + ++++ KT
Sbjct: 3 LQGKVWRFGNDVDTDIIIAARYLN--SSDPAE---LAQHCMEDADPQFSSK------VKT 51
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
I++AG NFGCGSSREHAP+A+ AAG S VVA+S+ARIF+RN+ G P+
Sbjct: 52 G-DIMVAGKNFGCGSSREHAPIAIKAAGLSCVVAKSFARIFYRNAFNIG--LPIFECPEA 108
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYAR 239
EE G+ +T++ A ++INHTTGKEY+ PI + + +IDAGG+ +Y +
Sbjct: 109 VEEVKEGEELTVDAATGKIINHTTGKEYQAAPIPEFMSQIIDAGGLISYVK 159
>gi|148269509|ref|YP_001243969.1| 3-isopropylmalate dehydratase small subunit [Thermotoga petrophila
RKU-1]
gi|147735053|gb|ABQ46393.1| 3-isopropylmalate dehydratase, small subunit [Thermotoga petrophila
RKU-1]
Length = 166
Score = 120 bits (301), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 72/175 (41%), Positives = 100/175 (57%), Gaps = 15/175 (8%)
Query: 67 TATFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENE 126
G +V GDN++TD+IIPA YL S+P E L Y + + R
Sbjct: 2 VVKIKGKVFVFGDNVNTDEIIPARYLN--TSDPQE---LAKYCMEDARPGFGRR------ 50
Query: 127 TKTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSE 186
K II+AG NFGCGSSREHAPVA+ AAG S V+A+S+ARIFFRN++ G P+ E
Sbjct: 51 DDIKGSIIVAGENFGCGSSREHAPVAIKAAGISCVIAKSFARIFFRNAINIG--LPI-VE 107
Query: 187 ARLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
+ +E GDV +++ + N T GKEY+++P + L +++AGG Y K
Sbjct: 108 LKEADEFEEGDVAEVDLENGVVRNLTKGKEYRIRPYPEFLMKIMEAGGWLEYCLK 162
>gi|281411773|ref|YP_003345852.1| 3-isopropylmalate dehydratase, small subunit [Thermotoga
naphthophila RKU-10]
gi|281372876|gb|ADA66438.1| 3-isopropylmalate dehydratase, small subunit [Thermotoga
naphthophila RKU-10]
Length = 165
Score = 120 bits (301), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 72/171 (42%), Positives = 100/171 (58%), Gaps = 15/171 (8%)
Query: 71 HGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTK 130
G +V GDN++TD+IIPA YL S+P E L Y + + R K
Sbjct: 5 KGKVFVFGDNVNTDEIIPARYLN--TSDPQE---LAKYCMEDARPGFGRR------DDIK 53
Query: 131 YKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLC 190
II+AG NFGCGSSREHAPVA+ AAG S V+A+S+ARIFFRN++ G P+ E +
Sbjct: 54 GSIIVAGENFGCGSSREHAPVAIKAAGISCVIAKSFARIFFRNAINIG--LPI-VELKEA 110
Query: 191 EECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
+E GDV +++ + N T GKEY+++P + L +++AGG Y K
Sbjct: 111 DEFEEGDVAEVDLENGVVRNLTKGKEYRIRPYPEFLMKIMEAGGWLEYCLK 161
>gi|170288183|ref|YP_001738421.1| 3-isopropylmalate dehydratase small subunit [Thermotoga sp. RQ2]
gi|403252293|ref|ZP_10918603.1| 3-isopropylmalate dehydratase small subunit [Thermotoga sp. EMP]
gi|170175686|gb|ACB08738.1| 3-isopropylmalate dehydratase, small subunit [Thermotoga sp. RQ2]
gi|402812306|gb|EJX26785.1| 3-isopropylmalate dehydratase small subunit [Thermotoga sp. EMP]
Length = 164
Score = 120 bits (300), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 72/171 (42%), Positives = 100/171 (58%), Gaps = 15/171 (8%)
Query: 71 HGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTK 130
G +V GDN++TD+IIPA YL S+P E L Y + + R K
Sbjct: 4 KGKVFVFGDNVNTDEIIPARYLN--TSDPQE---LAKYCMEDARPGFGRR------DDIK 52
Query: 131 YKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLC 190
II+AG NFGCGSSREHAPVA+ AAG S V+A+S+ARIFFRN++ G P+ E +
Sbjct: 53 GSIIVAGENFGCGSSREHAPVAIKAAGISCVIAKSFARIFFRNAINIG--LPI-VELKEA 109
Query: 191 EECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
+E GDV +++ + N T GKEY+++P + L +++AGG Y K
Sbjct: 110 DEFEEGDVAEVDLENGVVRNLTKGKEYRIRPYPEFLMKIMEAGGWLEYCLK 160
>gi|15643321|ref|NP_228365.1| 3-isopropylmalate dehydratase small subunit [Thermotoga maritima
MSB8]
gi|8134550|sp|Q9WZ25.1|LEUD2_THEMA RecName: Full=3-isopropylmalate dehydratase small subunit 2;
AltName: Full=Alpha-IPM isomerase 2; Short=IPMI 2;
AltName: Full=Isopropylmalate isomerase 2
gi|4981070|gb|AAD35640.1|AE001730_8 3-isopropylmalate dehydratase, small subunit [Thermotoga maritima
MSB8]
Length = 166
Score = 120 bits (300), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 71/175 (40%), Positives = 100/175 (57%), Gaps = 15/175 (8%)
Query: 67 TATFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENE 126
G +V GDN++TD+IIPA YL S+P E L Y + + R
Sbjct: 2 VVKIKGKVFVFGDNVNTDEIIPARYLN--TSDPQE---LAKYCMEDARPGFGRR------ 50
Query: 127 TKTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSE 186
K II+AG NFGCGSSREHAPVA+ AAG S V+A+S+ARIFFRN++ G P+ E
Sbjct: 51 DDIKGSIIVAGENFGCGSSREHAPVAIKAAGISCVIAKSFARIFFRNAINIG--LPI-VE 107
Query: 187 ARLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
+ +E GD+ +++ + N T GKEY+++P + L +++AGG Y K
Sbjct: 108 LKEADEFEEGDIAEVDLENGVVRNLTKGKEYRIRPYPEFLMKIMEAGGWLEYCLK 162
>gi|418045272|ref|ZP_12683368.1| 3-isopropylmalate dehydratase small subunit [Thermotoga maritima
MSB8]
gi|351678354|gb|EHA61501.1| 3-isopropylmalate dehydratase small subunit [Thermotoga maritima
MSB8]
Length = 165
Score = 119 bits (299), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 71/171 (41%), Positives = 100/171 (58%), Gaps = 15/171 (8%)
Query: 71 HGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTK 130
G +V GDN++TD+IIPA YL S+P E L Y + + R K
Sbjct: 5 KGKVFVFGDNVNTDEIIPARYLN--TSDPQE---LAKYCMEDARPGFGRR------DDIK 53
Query: 131 YKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLC 190
II+AG NFGCGSSREHAPVA+ AAG S V+A+S+ARIFFRN++ G P+ E +
Sbjct: 54 GSIIVAGENFGCGSSREHAPVAIKAAGISCVIAKSFARIFFRNAINIG--LPI-VELKEA 110
Query: 191 EECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
+E GD+ +++ + N T GKEY+++P + L +++AGG Y K
Sbjct: 111 DEFEEGDIAEVDLENGVVRNLTKGKEYRIRPYPEFLMKIMEAGGWLEYCLK 161
>gi|357418990|ref|YP_004931982.1| 3-isopropylmalate dehydratase small subunit [Thermovirga lienii DSM
17291]
gi|355396456|gb|AER65885.1| 3-isopropylmalate dehydratase, small subunit [Thermovirga lienii
DSM 17291]
Length = 171
Score = 119 bits (299), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 67/173 (38%), Positives = 99/173 (57%), Gaps = 15/173 (8%)
Query: 69 TFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETK 128
T G +V G+++DTD IIPA YL D+ +LG + + G + +F
Sbjct: 4 TLRGKAWVFGNDVDTDVIIPARYLVT-----DDPVELGKHCMEGHDPQFPEKF------- 51
Query: 129 TKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEAR 188
+ II+AG NFGCGSSREHAP+AL GCS V+A SYARIFFRN++ G P+
Sbjct: 52 HQGDIIVAGENFGCGSSREHAPLALLGIGCSCVIASSYARIFFRNAINVG--LPILECPE 109
Query: 189 LCEECSTGDVVTIEIAESRLINHTTGKEYKLKPI-GDLGPVIDAGGIFAYARK 240
+ + GD V + +AE + N +TG+ + + P+ G L ++D GG+ + R+
Sbjct: 110 AAKAINQGDEVEVNLAEGVIKNLSTGQSWNVPPLPGFLQDLMDKGGLVNWVRE 162
>gi|282857831|ref|ZP_06267038.1| 3-isopropylmalate dehydratase small subunit 1 (isopropylmalate
isomerase 1) (alpha-ipm isomerase 1) (ipmi 1)
[Pyramidobacter piscolens W5455]
gi|282584328|gb|EFB89689.1| 3-isopropylmalate dehydratase small subunit 1 (isopropylmalate
isomerase 1) (alpha-ipm isomerase 1) (ipmi 1)
[Pyramidobacter piscolens W5455]
Length = 167
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/164 (43%), Positives = 100/164 (60%), Gaps = 15/164 (9%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G V G NIDTDQI P +L+ ++PD+ ++ +A+ G + F
Sbjct: 7 GRASVFGSNIDTDQIYPGRFLS--ETDPDDVKR---HAMAGADPDFAENF-------QPG 54
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
+I+AG NFGCGSSREHA VAL AAG SAVVAES+ARIFFRN V G PL + A + +
Sbjct: 55 GLIVAGTNFGCGSSREHAAVALKAAGVSAVVAESFARIFFRNGVNLG--IPLVTCAGVSQ 112
Query: 192 ECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLG-PVIDAGGI 234
+ GD + ++++ S L N T+G+E +P+GD +++AGGI
Sbjct: 113 KVKDGDRLVLDLSRSLLKNETSGEELPCEPVGDYALTILEAGGI 156
>gi|222099087|ref|YP_002533655.1| 3-isopropylmalate dehydratase small subunit [Thermotoga neapolitana
DSM 4359]
gi|221571477|gb|ACM22289.1| 3-isopropylmalate dehydratase small subunit 2 [Thermotoga
neapolitana DSM 4359]
Length = 167
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/171 (42%), Positives = 99/171 (57%), Gaps = 15/171 (8%)
Query: 71 HGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTK 130
G +V GDN++TD+IIPA YL S+P E L Y + + R K
Sbjct: 7 KGKVFVFGDNVNTDEIIPARYLN--TSDPQE---LAKYCMEDARPGFGRR------DDIK 55
Query: 131 YKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLC 190
II+AG NFGCGSSREHAPVA+ AAG S V+A+S+ARIFFRN++ G P+ E +
Sbjct: 56 GGIIVAGENFGCGSSREHAPVAIKAAGISCVIAKSFARIFFRNAINIG--LPI-VELKEA 112
Query: 191 EECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
+E GDV +++ + N + GKEYK++P + L ++ AGG Y K
Sbjct: 113 DEFEEGDVAEVDLENGVVKNLSKGKEYKIRPYPEFLMNIMKAGGWLEYCLK 163
>gi|157164743|ref|YP_001467085.1| 3-isopropylmalate dehydratase small subunit [Campylobacter concisus
13826]
gi|112800405|gb|EAT97749.1| 3-isopropylmalate dehydratase small subunit (isopropylmalate
isomerase) (alpha-ipm isomerase) (ipmi) [Campylobacter
concisus 13826]
Length = 161
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/170 (40%), Positives = 99/170 (58%), Gaps = 16/170 (9%)
Query: 71 HGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTK 130
G + GDNIDTD II A YL N + ++L + + ++++ K
Sbjct: 3 QGKVWKFGDNIDTDIIIAARYL-----NTSDEKELAKHIMEDADPKFSSKI-------AK 50
Query: 131 YKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLC 190
II+AG NFGCGSSREHAP+AL AG +AVVA+S+ARIF+RNS TG L E +
Sbjct: 51 GDIIVAGENFGCGSSREHAPLALKEAGIAAVVAKSFARIFYRNSFNTG---LLILEIKET 107
Query: 191 EECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYAR 239
+E + GD + I++ +IN +T KEYK I + +++AGG+ YA+
Sbjct: 108 DEINEGDTLKIDVDNGVIINESTKKEYKFNAIPPFMQELLNAGGLIEYAK 157
>gi|154174978|ref|YP_001408082.1| alginate O-acetylation protein [Campylobacter curvus 525.92]
gi|402546928|ref|ZP_10843801.1| putative 3-isopropylmalate dehydratase, small subunit
[Campylobacter sp. FOBRC14]
gi|112803092|gb|EAU00436.1| alginate O-acetylation protein [Campylobacter curvus 525.92]
gi|401016763|gb|EJP75526.1| putative 3-isopropylmalate dehydratase, small subunit
[Campylobacter sp. FOBRC14]
Length = 160
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/169 (42%), Positives = 97/169 (57%), Gaps = 16/169 (9%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + GDNIDTD II A YL N + +L + + ++++ K
Sbjct: 3 GKVWKFGDNIDTDIIIAARYL-----NTSDENELAKHIMEDADPKFSSKI-------AKG 50
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
II+AG NFGCGSSREHAP+AL AAG AVVA+SYARIF+RNS TG L E +
Sbjct: 51 DIIVAGENFGCGSSREHAPLALKAAGIGAVVAKSYARIFYRNSFNTG---LLILEISQTD 107
Query: 192 ECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYAR 239
E + GD + I++ +IN +T KEYK PI + ++ +GG+ YA+
Sbjct: 108 ELNEGDELKIDVDNGTIINLSTQKEYKFNPIPPFMQELLKSGGLIEYAK 156
>gi|167044158|gb|ABZ08840.1| putative aconitase C-terminal domain protein [uncultured marine
crenarchaeote HF4000_APKG5E24]
gi|167044500|gb|ABZ09175.1| putative aconitase C-terminal domain protein [uncultured marine
crenarchaeote HF4000_APKG6J21]
gi|167044973|gb|ABZ09638.1| putative aconitase C-terminal domain protein [uncultured marine
crenarchaeote HF4000_APKG8G2]
Length = 160
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/160 (40%), Positives = 95/160 (59%), Gaps = 13/160 (8%)
Query: 79 DNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKIIIAGG 138
DNIDTD I+P YL L E+ +L +A+ G+ + ++ + N II+ G
Sbjct: 11 DNIDTDVILPGPYLKL-----HEHAELAEHAMEGMDPDFHSKVKEAN-------IIVTGK 58
Query: 139 NFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEECSTGDV 198
NFGCGSSREHAP+AL A+G A++A S+ARIF+RNSV + P++ + + S D
Sbjct: 59 NFGCGSSREHAPIALSASGIEAILALSFARIFYRNSVDGAYLLPIEIDEKTYSAISEKDE 118
Query: 199 VTIEIAESRLINHTTGKEYKLKPIGDL-GPVIDAGGIFAY 237
+ I+ + + N T + Y +KP DL G +I+AGG+F Y
Sbjct: 119 LEIDTNTNVIKNITKNQTYSMKPFPDLIGKIIEAGGLFKY 158
>gi|167045217|gb|ABZ09877.1| putative aconitase C-terminal domain protein [uncultured marine
crenarchaeote HF4000_APKG8O8]
Length = 161
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 64/160 (40%), Positives = 95/160 (59%), Gaps = 13/160 (8%)
Query: 79 DNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKIIIAGG 138
DNIDTD I+P EYL L ++ +LG +A+ G+ + ++ + N II+ G
Sbjct: 12 DNIDTDVILPGEYLKL-----HDHAELGEHAMEGMDPNFHSKAKEAN-------IIVTGR 59
Query: 139 NFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEECSTGDV 198
NFGCGSSREHAP+A+ A G AV+A S+ARIF+RNSV + P++ + S D
Sbjct: 60 NFGCGSSREHAPIAISACGIQAVLALSFARIFYRNSVDGAYLLPIEIDENTYSSISEKDE 119
Query: 199 VTIEIAESRLINHTTGKEYKLKPIGDL-GPVIDAGGIFAY 237
+ I+ +++ + N T + Y +KP DL +I AGG+F Y
Sbjct: 120 LEIDTSKNEIKNLTKNETYAIKPFPDLISKIIKAGGLFKY 159
>gi|365153359|ref|ZP_09349799.1| 3-isopropylmalate dehydratase small subunit [Campylobacter sp.
10_1_50]
gi|416117267|ref|ZP_11594570.1| 3-isopropylmalate dehydratase small subunit [Campylobacter concisus
UNSWCD]
gi|363651887|gb|EHL90939.1| 3-isopropylmalate dehydratase small subunit [Campylobacter sp.
10_1_50]
gi|384577224|gb|EIF06516.1| 3-isopropylmalate dehydratase small subunit [Campylobacter concisus
UNSWCD]
Length = 161
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 68/170 (40%), Positives = 99/170 (58%), Gaps = 16/170 (9%)
Query: 71 HGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTK 130
G + GDNIDTD II A YL N + ++L + + ++++ K
Sbjct: 3 QGKVWKFGDNIDTDIIIAARYL-----NTSDEKELAKHIMEDADPKFSSKI-------AK 50
Query: 131 YKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLC 190
II+AG NFGCGSSREHAP+AL AG +AVVA+S+ARIF+RNS TG L E +
Sbjct: 51 GDIIVAGENFGCGSSREHAPLALKEAGIAAVVAKSFARIFYRNSFNTG---LLILEIKET 107
Query: 191 EECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYAR 239
+E + GD + I++ ++N +T KEYK I + +++AGG+ YA+
Sbjct: 108 DEINEGDTLKIDVDNGVIVNESTKKEYKFNAIPPFMQELLNAGGLIEYAK 157
>gi|134298165|ref|YP_001111661.1| 3-isopropylmalate dehydratase small subunit [Desulfotomaculum
reducens MI-1]
gi|134050865|gb|ABO48836.1| 3-isopropylmalate dehydratase, small subunit [Desulfotomaculum
reducens MI-1]
Length = 166
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 68/170 (40%), Positives = 101/170 (59%), Gaps = 15/170 (8%)
Query: 71 HGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTK 130
G + G++IDTD II A YL S+P E L + + T+ ++ +
Sbjct: 4 QGKVWKFGNDIDTDIIIAARYLN--SSDPVE---LAKHCMEDGDPTFASKV-------SA 51
Query: 131 YKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLC 190
+++AG NFGCGSSREHAP+A+ AAG S VVA+SYARIF+RN+ G P+
Sbjct: 52 GDVMLAGKNFGCGSSREHAPIAIKAAGVSCVVAKSYARIFYRNAFNIG--LPIFECPEAV 109
Query: 191 EECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYAR 239
+E + GDV+T++ A ++N T+GK Y+ PI D + +IDAGG+ +Y +
Sbjct: 110 DEINEGDVITVDAASGAIVNQTSGKHYQAVPIPDFMRQIIDAGGLISYVK 159
>gi|150400780|ref|YP_001324546.1| 3-isopropylmalate dehydratase small subunit [Methanococcus aeolicus
Nankai-3]
gi|150013483|gb|ABR55934.1| 3-isopropylmalate dehydratase, small subunit [Methanococcus
aeolicus Nankai-3]
Length = 168
Score = 117 bits (292), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 68/173 (39%), Positives = 95/173 (54%), Gaps = 15/173 (8%)
Query: 69 TFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETK 128
T G + GDNIDTD I+PA YL E+L + + G + E
Sbjct: 4 TIEGKVWKFGDNIDTDAILPARYLVYTTE-----EELAKFVMAGTDPEFA-------EKV 51
Query: 129 TKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEAR 188
K III G NFG GSSREHAP+ L AG S V+AES+ARIF+RNS+ G PL
Sbjct: 52 EKGDIIIGGTNFGSGSSREHAPMGLKGAGISLVIAESFARIFYRNSINIG--LPLLECKD 109
Query: 189 LCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
+ + + GDV+ I + E +IN TTGKE K + + + + +++ GG+ + +K
Sbjct: 110 ITKHVNEGDVLQINLDEGTIINKTTGKELKGQKLPEFMMDILNDGGLMPHLKK 162
>gi|288818004|ref|YP_003432351.1| 3-isopropylmalate dehydratase small subunit [Hydrogenobacter
thermophilus TK-6]
gi|384128767|ref|YP_005511380.1| 3-isopropylmalate dehydratase small subunit [Hydrogenobacter
thermophilus TK-6]
gi|288787403|dbj|BAI69150.1| 3-isopropylmalate dehydratase small subunit [Hydrogenobacter
thermophilus TK-6]
gi|308751604|gb|ADO45087.1| 3-isopropylmalate dehydratase, small subunit [Hydrogenobacter
thermophilus TK-6]
Length = 167
Score = 116 bits (290), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 68/170 (40%), Positives = 101/170 (59%), Gaps = 14/170 (8%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + GDN+DTDQIIPA YL + D YE L + + + T F +++ K
Sbjct: 5 GKVWKFGDNVDTDQIIPARYL----NTSDPYE-LAQHVM---EDSEHTNFAKDHQ---KG 53
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
II+AG NFG GSSREHAP+A+ AG V+A+S+ARIFFRN++ G P+ + +
Sbjct: 54 DIIVAGKNFGSGSSREHAPIAIKYAGVPVVIAKSFARIFFRNAINIG--LPIVEAPQAVD 111
Query: 192 ECSTGDVVTIEIAESRLINHTTGKEYKLKPI-GDLGPVIDAGGIFAYARK 240
E + GD V +++ + + N TTGKEY+ +L ++ AGG+ YA++
Sbjct: 112 EINHGDEVEVDLEKGIIKNITTGKEYQATRFPQELQAILKAGGLMEYAKQ 161
>gi|150403058|ref|YP_001330352.1| 3-isopropylmalate dehydratase, small subunit [Methanococcus
maripaludis C7]
gi|150034088|gb|ABR66201.1| 3-isopropylmalate dehydratase, small subunit [Methanococcus
maripaludis C7]
Length = 167
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/173 (38%), Positives = 95/173 (54%), Gaps = 15/173 (8%)
Query: 69 TFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETK 128
T G +V GDNIDTD I+PA YL E+L YA+ G + E
Sbjct: 4 TVEGKTWVFGDNIDTDAILPARYLVYTTE-----EQLAKYAMTGTDPEFP-------EKA 51
Query: 129 TKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEAR 188
T II+ G NFGCGSSREHAP+ L G S V+AES+ARIF+RNS+ G +PL
Sbjct: 52 TVGDIIVGGKNFGCGSSREHAPIGLKGLGISMVIAESFARIFYRNSINIG--FPLLECKD 109
Query: 189 LCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
+ + GDV+ +++ + + N TTG E + + D + +++ GG+ + +K
Sbjct: 110 ISKHVKEGDVLRVDLDKGTIKNVTTGDELTGQNLPDFMMEILNNGGLMPHLKK 162
>gi|289549245|ref|YP_003474233.1| 3-isopropylmalate dehydratase, small subunit [Thermocrinis albus
DSM 14484]
gi|289182862|gb|ADC90106.1| 3-isopropylmalate dehydratase, small subunit [Thermocrinis albus
DSM 14484]
Length = 167
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/170 (40%), Positives = 100/170 (58%), Gaps = 14/170 (8%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + GDN+DTDQIIPA YL + D YE L + + + F E++
Sbjct: 5 GKVWKFGDNVDTDQIIPARYL----NTTDPYE-LAQHVM---EDSEHPEFAKEHQPGD-- 54
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
II+AG NFG GSSREHAP+A+ AG V+A+S+ARIFFRN++ G P+ + +
Sbjct: 55 -IIVAGKNFGSGSSREHAPIAIKYAGVPVVIAKSFARIFFRNAINIG--LPIVEVPQAVD 111
Query: 192 ECSTGDVVTIEIAESRLINHTTGKEYKLKPI-GDLGPVIDAGGIFAYARK 240
E S GD + +++ + + N TTGKEY +K ++ ++ AGG+ YAR+
Sbjct: 112 EISHGDELEVDLDKGVIKNLTTGKEYSVKRFPEEIQAILKAGGLMEYARQ 161
>gi|442804836|ref|YP_007372985.1| 3-isopropylmalate dehydratase small subunit LeuD [Clostridium
stercorarium subsp. stercorarium DSM 8532]
gi|442740686|gb|AGC68375.1| 3-isopropylmalate dehydratase small subunit LeuD [Clostridium
stercorarium subsp. stercorarium DSM 8532]
Length = 162
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/163 (40%), Positives = 98/163 (60%), Gaps = 15/163 (9%)
Query: 78 GDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKIIIAG 137
GDNIDTD IIPA YL S+P E L + + L T+ +R + + I++ G
Sbjct: 11 GDNIDTDVIIPARYLN--TSDPGE---LAKHCMEDLDKTFVSRVKNGD-------ILVGG 58
Query: 138 GNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEECSTGD 197
NFGCGSSREHAP+A+ A+G S VVA+S+ARIF+RN++ G P+ +E + GD
Sbjct: 59 FNFGCGSSREHAPIAIKASGISCVVAKSFARIFYRNAINIG--LPIVECPECVDETNDGD 116
Query: 198 VVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYAR 239
+ +++ +INHTTGK+YK + + +I +GG+ Y +
Sbjct: 117 KLEVDLDNGVIINHTTGKKYKTTAFPEFIQDIIKSGGLMQYIK 159
>gi|134046566|ref|YP_001098051.1| 3-isopropylmalate dehydratase, small subunit [Methanococcus
maripaludis C5]
gi|132664191|gb|ABO35837.1| 3-isopropylmalate dehydratase, small subunit [Methanococcus
maripaludis C5]
Length = 167
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/173 (38%), Positives = 94/173 (54%), Gaps = 15/173 (8%)
Query: 69 TFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETK 128
T G +V GDNIDTD I+PA YL E+L YA+ G + E
Sbjct: 4 TVEGKAWVFGDNIDTDAILPARYLVYTTE-----EQLAKYAMTGTDPEFP-------EKA 51
Query: 129 TKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEAR 188
T II+ G NFGCGSSREHAP+ L G S V+AES+ARIF+RNS+ G +PL
Sbjct: 52 TVGDIIVGGKNFGCGSSREHAPIGLKGLGISMVIAESFARIFYRNSINIG--FPLLECKD 109
Query: 189 LCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
+ + GDV+ + + + + N TTG E + + D + +++ GG+ + +K
Sbjct: 110 ISKHVKEGDVLRVNLDKGTIKNVTTGAELTGQKLPDFMMEILNNGGLMPHLKK 162
>gi|424820840|ref|ZP_18245878.1| 3-isopropylmalate dehydratase small subunit [Campylobacter fetus
subsp. venerealis NCTC 10354]
gi|342327619|gb|EGU24103.1| 3-isopropylmalate dehydratase small subunit [Campylobacter fetus
subsp. venerealis NCTC 10354]
Length = 159
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/168 (41%), Positives = 98/168 (58%), Gaps = 16/168 (9%)
Query: 75 YVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKII 134
+ DNIDTD II A YL SNPDE L + + + ++ TK II
Sbjct: 5 WKFKDNIDTDIIIAARYLN--TSNPDE---LAKHIMEDADKDFYSKV-------TKGDII 52
Query: 135 IAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEECS 194
+AG NFGCGSSREHAP+AL AAG S V+A S+ARIF+RNS TG L E + ++ S
Sbjct: 53 VAGENFGCGSSREHAPLALKAAGISVVIARSFARIFYRNSFNTG---LLILECQKTDDIS 109
Query: 195 TGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARKT 241
GD + ++ + + N T EYK +PI + + ++ +GG+ YA+K+
Sbjct: 110 EGDNLEVDFSGGIIKNLTQKTEYKFEPIPEFMQELVRSGGLINYAKKS 157
>gi|45357699|ref|NP_987256.1| 3-isopropylmalate dehydratase small subunit [Methanococcus
maripaludis S2]
gi|340623318|ref|YP_004741771.1| 3-isopropylmalate dehydratase small subunit [Methanococcus
maripaludis X1]
gi|45047259|emb|CAF29692.1| 3-isopropylmalate dehydratase small subunit [Methanococcus
maripaludis S2]
gi|339903586|gb|AEK19028.1| 3-isopropylmalate dehydratase, small subunit [Methanococcus
maripaludis X1]
Length = 167
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 66/173 (38%), Positives = 95/173 (54%), Gaps = 15/173 (8%)
Query: 69 TFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETK 128
T G +V GDNIDTD I+PA YL E+L YA+ G + E
Sbjct: 4 TVEGKAWVFGDNIDTDAILPARYLVYTTE-----EQLAKYAMTGTDPEFP-------EKA 51
Query: 129 TKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEAR 188
T II+ G NFGCGSSREHAP+ L G S V+AES+ARIF+RNS+ G +PL
Sbjct: 52 TVGDIIVGGKNFGCGSSREHAPIGLKGLGISMVIAESFARIFYRNSINIG--FPLLECKD 109
Query: 189 LCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
+ + GDV+ +++ + + N TTG E + + D + +++ GG+ + +K
Sbjct: 110 ISKHVKEGDVLRVDLDKGTVKNVTTGVELTGQNLPDFMMEILNNGGLMPHLKK 162
>gi|408405052|ref|YP_006863035.1| 3-isopropylmalate dehydratase small subunit [Candidatus
Nitrososphaera gargensis Ga9.2]
gi|408365648|gb|AFU59378.1| 3-isopropylmalate dehydratase small subunit [Candidatus
Nitrososphaera gargensis Ga9.2]
Length = 167
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 56/160 (35%), Positives = 97/160 (60%), Gaps = 13/160 (8%)
Query: 79 DNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKIIIAGG 138
DNIDTD IIP YL + ++++L +A+ G+ + E ++ ++ G
Sbjct: 15 DNIDTDVIIPGPYLKI-----HDHKELAKHAMEGIDPKFP-------EKVSQGDFLVTGN 62
Query: 139 NFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEECSTGDV 198
NFGCGSSREHAP+AL G A+++ S+ARIF+RN+V G + P++ + ++ S D
Sbjct: 63 NFGCGSSREHAPIALSQTGIKAILSPSFARIFYRNAVDGGYLLPIEIDESTVKKISDKDE 122
Query: 199 VTIEIAESRLINHTTGKEYKLKPIGDL-GPVIDAGGIFAY 237
+ I++ ++R+ N T ++Y++KP +L +++AGG+ Y
Sbjct: 123 LEIDLEQNRITNITKNEQYQMKPFPELIAKIVEAGGLMNY 162
>gi|319789328|ref|YP_004150961.1| 3-isopropylmalate dehydratase, small subunit [Thermovibrio
ammonificans HB-1]
gi|317113830|gb|ADU96320.1| 3-isopropylmalate dehydratase, small subunit [Thermovibrio
ammonificans HB-1]
Length = 167
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/175 (38%), Positives = 97/175 (55%), Gaps = 15/175 (8%)
Query: 67 TATFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENE 126
+ G + GD+++TD+IIPA YL S+P E L + + + +
Sbjct: 2 SEVLKGRAFKFGDDVNTDEIIPARYLNT--SDPKE---LAKHVMEDADPEFPKKV----- 51
Query: 127 TKTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSE 186
II+AG NFGCGSSREHAP+A+ AAG SAV+A+S+ARIF+RN++ G P+
Sbjct: 52 --QPGDIIVAGKNFGCGSSREHAPIAIKAAGVSAVIAKSFARIFYRNAINIG--LPIFES 107
Query: 187 ARLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPI-GDLGPVIDAGGIFAYARK 240
E GDVV I + N T G E+K PI D+ +++AGG+ YA++
Sbjct: 108 PEAVEGIEEGDVVEINPETGVIRNLTKGTEFKATPIPEDIRKIMEAGGLMEYAKQ 162
>gi|152993292|ref|YP_001359013.1| 3-isopropylmalate dehydratase small subunit [Sulfurovum sp.
NBC37-1]
gi|151425153|dbj|BAF72656.1| 3-isopropylmalate dehydratase, small subunit [Sulfurovum sp.
NBC37-1]
Length = 165
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/173 (38%), Positives = 99/173 (57%), Gaps = 18/173 (10%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
G + GDNIDTD II A YL N E +L + + + ++ + +
Sbjct: 1 MQGKVWKFGDNIDTDLIIAARYL-----NTSEPAELAKHVMEDADPEFVSKMHEGD---- 51
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG-EIYPLDSEAR 188
II+AG NFGCGSSREHAP+AL AAG +AV+A ++ARIF+RN+ G I+ L
Sbjct: 52 ---IIVAGENFGCGSSREHAPIALKAAGINAVIAPTFARIFYRNAFNMGLPIFELPE--- 105
Query: 189 LCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
EE + GDVV +++ +IN T K YK PI + + +++AGG+ +A++
Sbjct: 106 -AEEINEGDVVRVDMDAGEIINVTQAKTYKFTPIPEFMQELVNAGGLIEFAKQ 157
>gi|296109752|ref|YP_003616701.1| 3-isopropylmalate dehydratase, small subunit [methanocaldococcus
infernus ME]
gi|295434566|gb|ADG13737.1| 3-isopropylmalate dehydratase, small subunit [Methanocaldococcus
infernus ME]
Length = 163
Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/173 (36%), Positives = 98/173 (56%), Gaps = 15/173 (8%)
Query: 69 TFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETK 128
G + GDN+DTD I+PA YL + + P+E L YA+ G+ + +
Sbjct: 2 NIKGRVWKFGDNVDTDAILPARYL--IYTEPEE---LAKYAMTGIDEEFPKK-------A 49
Query: 129 TKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEAR 188
K II+AG NFGCGSSREHAP+ L A G SAV+AES+ARIF+RN++ G PL
Sbjct: 50 KKGDIIVAGKNFGCGSSREHAPIGLKALGISAVIAESFARIFYRNAINIG--LPLIECKD 107
Query: 189 LCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
+ ++ GD++ + + + N T G+ Y+ + + + +++AGG+ Y K
Sbjct: 108 ISKKVDEGDILEVNLKTGEIKNLTKGETYQGTKLPEFMMEILEAGGLMEYLVK 160
>gi|18977311|ref|NP_578668.1| 3-isopropylmalate dehydratase small subunit [Pyrococcus furiosus
DSM 3638]
gi|397651443|ref|YP_006492024.1| 3-isopropylmalate dehydratase small subunit [Pyrococcus furiosus
COM1]
gi|23396653|sp|Q8U2A0.1|LEUD1_PYRFU RecName: Full=3-isopropylmalate dehydratase small subunit 1;
AltName: Full=Alpha-IPM isomerase 1; Short=IPMI 1;
AltName: Full=Isopropylmalate isomerase 1
gi|18892984|gb|AAL81063.1| putative 3-isopropylmalate dehydratase small subunit [Pyrococcus
furiosus DSM 3638]
gi|393189034|gb|AFN03732.1| 3-isopropylmalate dehydratase small subunit [Pyrococcus furiosus
COM1]
Length = 164
Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 71/174 (40%), Positives = 98/174 (56%), Gaps = 21/174 (12%)
Query: 71 HGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTK 130
G + GDNIDTD IIPA YL S+P E L + L L + E + K
Sbjct: 4 RGRAWKYGDNIDTDVIIPARYLNT--SDPKE---LAQHVLEDL----------DPEFRYK 48
Query: 131 YK---IIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEA 187
K II+AG NFGCGSSREHAP+A+ AAG SAV+A+S+ARIF+RN++ G P+
Sbjct: 49 MKPGDIIVAGENFGCGSSREHAPLAIKAAGVSAVIAKSFARIFYRNAINIG--LPILEAP 106
Query: 188 RLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
E TGD + I+ + + N T G+ Y P + + +I AGG+ +A++
Sbjct: 107 EAVERIETGDEIEIDFSTGEIRNLTKGEVYHANPFPEFIMEIIKAGGLVEWAKR 160
>gi|14521550|ref|NP_127026.1| 3-isopropylmalate dehydratase small subunit [Pyrococcus abyssi GE5]
gi|23396686|sp|Q9UZ06.1|LEUD1_PYRAB RecName: Full=3-isopropylmalate dehydratase small subunit 1;
AltName: Full=Alpha-IPM isomerase 1; Short=IPMI 1;
AltName: Full=Isopropylmalate isomerase 1
gi|5458769|emb|CAB50256.1| leuD-1 3-isopropylmalate dehydratase, small subunit [Pyrococcus
abyssi GE5]
gi|380742160|tpe|CCE70794.1| TPA: 3-isopropylmalate dehydratase small subunit [Pyrococcus abyssi
GE5]
Length = 164
Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 69/174 (39%), Positives = 100/174 (57%), Gaps = 21/174 (12%)
Query: 71 HGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTK 130
G + GDNIDTD IIPA YL S+P E L + L L + E ++K
Sbjct: 4 RGRAWKYGDNIDTDVIIPARYLNT--SDPKE---LAKHVLEDL----------DPEFRSK 48
Query: 131 YK---IIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEA 187
K II+AG NFGCGSSREHAP+A+ AAG S V+A+S+ARIF+RN++ G P+
Sbjct: 49 MKPGDIIVAGENFGCGSSREHAPLAIKAAGVSCVIAKSFARIFYRNAINIG--LPILEAP 106
Query: 188 RLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
+ + TGD + ++ + + N T G+ Y+ P D + +I AGG+ +A++
Sbjct: 107 QAVDRIETGDELEVDFSSGEIRNLTKGEVYRANPFPDFIMEIIKAGGLVEWAKR 160
>gi|15606584|ref|NP_213964.1| 3-isopropylmalate dehydratase [Aquifex aeolicus VF5]
gi|2983802|gb|AAC07359.1| 3-isopropylmalate dehydratase [Aquifex aeolicus VF5]
Length = 219
Score = 114 bits (284), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 67/172 (38%), Positives = 99/172 (57%), Gaps = 14/172 (8%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
F G + GDN+DTDQIIPA YL + D YE L + + + F E++
Sbjct: 56 FRGRVWKFGDNVDTDQIIPARYL----NTSDPYE-LAKHVM---EDSEHPEFAKEHKEGD 107
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
II+AG NFG GSSREHAP+A+ +G V+A+S+ARIFFRN++ G P+
Sbjct: 108 ---IIVAGKNFGSGSSREHAPIAIKYSGVPVVIAKSFARIFFRNAINIG--LPIVEAPEA 162
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYK-LKPIGDLGPVIDAGGIFAYARK 240
+E GD + +++ + + N TGKEY+ K +L ++ AGG+ AYA++
Sbjct: 163 VDEIEHGDEIEVDLEKGVIKNLRTGKEYQATKFPKELQDILKAGGLMAYAKE 214
>gi|424782009|ref|ZP_18208861.1| 3-isopropylmalate dehydratase small subunit [Campylobacter showae
CSUNSWCD]
gi|421959949|gb|EKU11555.1| 3-isopropylmalate dehydratase small subunit [Campylobacter showae
CSUNSWCD]
Length = 160
Score = 114 bits (284), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 66/167 (39%), Positives = 98/167 (58%), Gaps = 16/167 (9%)
Query: 74 CYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKI 133
+ GDNIDTD II A YL N + + L ++ + ++ + + +
Sbjct: 6 VWKFGDNIDTDIIIAARYL-----NTSDEKILATHIMEDADPEFSKKI-------SAGDV 53
Query: 134 IIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEEC 193
I+AG NFGCGSSREHAP+AL AAG AV+A+S+ARIF+RNS TG L E + +E
Sbjct: 54 IVAGENFGCGSSREHAPLALKAAGIGAVIAKSFARIFYRNSFNTG---LLILEIKETDEI 110
Query: 194 STGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYAR 239
+ GD + I++ ++N T+GKEYK PI + ++ +GG+ YA+
Sbjct: 111 NAGDELKIDVDNGAVVNLTSGKEYKFSPIPPFMQELLKSGGLIEYAK 157
>gi|435850365|ref|YP_007311951.1| 3-isopropylmalate dehydratase, small subunit [Methanomethylovorans
hollandica DSM 15978]
gi|433660995|gb|AGB48421.1| 3-isopropylmalate dehydratase, small subunit [Methanomethylovorans
hollandica DSM 15978]
Length = 160
Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 102/173 (58%), Gaps = 16/173 (9%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
G + GD+IDTD +IP YL + + P+E L ++A G+ A + + + EN+
Sbjct: 1 MKGKVWKFGDDIDTDAVIPGRYLIM--NTPEE---LAAHAFEGVRAEFPKK-VQEND--- 51
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
II+AG NFGCGSSREHAP+AL V+A+S+ARIFFRN++ G PL E
Sbjct: 52 ---IIVAGNNFGCGSSREHAPLALKGTKIGCVIAKSFARIFFRNAINIG--VPL-LECSE 105
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARKT 241
+ GD++ +++A + N T ++Y+ P+ D + ++D+GG+ YA+K
Sbjct: 106 ADRIDDGDILEVDLATGVIKNMTKNEQYQATPLPDFVRGIVDSGGLIEYAKKM 158
>gi|269836796|ref|YP_003319024.1| 3-isopropylmalate dehydratase small subunit [Sphaerobacter
thermophilus DSM 20745]
gi|269786059|gb|ACZ38202.1| 3-isopropylmalate dehydratase, small subunit [Sphaerobacter
thermophilus DSM 20745]
Length = 172
Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 68/167 (40%), Positives = 94/167 (56%), Gaps = 15/167 (8%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
G + GD+IDTD IIPA YL E E+L + + + T+ ++
Sbjct: 3 IRGKVWKFGDDIDTDVIIPARYLVTF-----EPEELAKHVMEDIDPTFASKV-------Q 50
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
II+AG NFGCGSSREHAP+A+ AG +AVVAESYARIFFRN++ G P+ A
Sbjct: 51 PGDIIVAGKNFGCGSSREHAPIAIKGAGVAAVVAESYARIFFRNAINIG--LPVIDAAEA 108
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIF 235
E GD++ I+ E ++N TGK Y+ D + +I+AGG+
Sbjct: 109 AREAEEGDILEIDTEEGEILNTRTGKTYRAARYDDFIQDIINAGGLM 155
>gi|153954776|ref|YP_001395541.1| hypothetical protein CKL_2158 [Clostridium kluyveri DSM 555]
gi|219855236|ref|YP_002472358.1| hypothetical protein CKR_1893 [Clostridium kluyveri NBRC 12016]
gi|146347634|gb|EDK34170.1| LeuD [Clostridium kluyveri DSM 555]
gi|219568960|dbj|BAH06944.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 164
Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 68/165 (41%), Positives = 95/165 (57%), Gaps = 17/165 (10%)
Query: 78 GDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKIIIAG 137
GDNIDTD IIPA YL N + ++L S+ + L ++ + K IIIAG
Sbjct: 10 GDNIDTDVIIPARYL-----NTSDEKELASHCMEDLDKDFSKKI-------NKGDIIIAG 57
Query: 138 GNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG-EIYPLDSEARLCEECSTG 196
NFGCGSSREHAP+A+ A+G S V+AE++ARIFFRNS+ G I AR EE
Sbjct: 58 KNFGCGSSREHAPIAIKASGISCVIAETFARIFFRNSINIGLPIMECREAARDIEE---N 114
Query: 197 DVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
D ++I++ + N T K YK P + + +I++ G+ Y +K
Sbjct: 115 DEISIDVNSGAITNITKNKTYKAAPFPEFMQKIIESQGLINYIKK 159
>gi|7994624|sp|O67399.2|LEUD_AQUAE RecName: Full=3-isopropylmalate dehydratase small subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
Length = 168
Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 67/172 (38%), Positives = 99/172 (57%), Gaps = 14/172 (8%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
F G + GDN+DTDQIIPA YL + D YE L + + + F E++
Sbjct: 5 FRGRVWKFGDNVDTDQIIPARYL----NTSDPYE-LAKHVM---EDSEHPEFAKEHKEGD 56
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
II+AG NFG GSSREHAP+A+ +G V+A+S+ARIFFRN++ G P+
Sbjct: 57 ---IIVAGKNFGSGSSREHAPIAIKYSGVPVVIAKSFARIFFRNAINIG--LPIVEAPEA 111
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKL-KPIGDLGPVIDAGGIFAYARK 240
+E GD + +++ + + N TGKEY+ K +L ++ AGG+ AYA++
Sbjct: 112 VDEIEHGDEIEVDLEKGVIKNLRTGKEYQATKFPKELQDILKAGGLMAYAKE 163
>gi|163783729|ref|ZP_02178715.1| 3-isopropylmalate dehydratase [Hydrogenivirga sp. 128-5-R1-1]
gi|159880975|gb|EDP74493.1| 3-isopropylmalate dehydratase [Hydrogenivirga sp. 128-5-R1-1]
Length = 168
Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 67/173 (38%), Positives = 98/173 (56%), Gaps = 14/173 (8%)
Query: 69 TFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETK 128
G + GDN+DTDQIIPA YL + D YE L + + + D E
Sbjct: 4 VIRGKVWKFGDNVDTDQIIPARYL----NTSDPYE-LAKHVM------EDSEHPDFAEKH 52
Query: 129 TKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEAR 188
+ II+AG NFG GSSREHAP+A+ AG V+A+S+ARIFFRN++ G P+
Sbjct: 53 QEGDIIVAGKNFGSGSSREHAPIAIKFAGVPVVIAKSFARIFFRNAINIG--LPIVEAPE 110
Query: 189 LCEECSTGDVVTIEIAESRLINHTTGKEYK-LKPIGDLGPVIDAGGIFAYARK 240
+E + GD + +++ + + N TTGKEY+ K +L ++ AGG+ YA++
Sbjct: 111 AVDEINQGDEIEVDLEKGVVKNLTTGKEYQATKFPEELQAILRAGGLMEYAKE 163
>gi|118474468|ref|YP_892185.1| 3-isopropylmalate dehydratase small subunit [Campylobacter fetus
subsp. fetus 82-40]
gi|118413694|gb|ABK82114.1| 3-isopropylmalate dehydratase small subunit [Campylobacter fetus
subsp. fetus 82-40]
Length = 159
Score = 113 bits (283), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 69/168 (41%), Positives = 98/168 (58%), Gaps = 16/168 (9%)
Query: 75 YVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKII 134
+ DNIDTD II A YL SNPDE L + + + ++ TK II
Sbjct: 5 WKFKDNIDTDIIIAARYLN--TSNPDE---LAKHIMEDADKDFYSKV-------TKGDII 52
Query: 135 IAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEECS 194
+AG NFGCGSSREHAP+AL AAG S V+A S+ARIF+RNS TG L E + ++ S
Sbjct: 53 VAGENFGCGSSREHAPLALKAAGISVVIARSFARIFYRNSFNTG---LLILECQKTDDIS 109
Query: 195 TGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARKT 241
GD + ++ + + N T +YK +PI + + ++ +GG+ YA+K+
Sbjct: 110 EGDNLEVDFSGGIIKNLTQKTDYKFEPIPEFMQELVRSGGLINYAKKS 157
>gi|332799874|ref|YP_004461373.1| 3-isopropylmalate dehydratase small subunit [Tepidanaerobacter
acetatoxydans Re1]
gi|438003143|ref|YP_007272886.1| 3-isopropylmalate dehydratase small subunit [Tepidanaerobacter
acetatoxydans Re1]
gi|332697609|gb|AEE92066.1| 3-isopropylmalate dehydratase small subunit [Tepidanaerobacter
acetatoxydans Re1]
gi|432179937|emb|CCP26910.1| 3-isopropylmalate dehydratase small subunit [Tepidanaerobacter
acetatoxydans Re1]
Length = 167
Score = 113 bits (283), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 68/177 (38%), Positives = 106/177 (59%), Gaps = 23/177 (12%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
F G ++ DNIDTD IIPA YL N + ++L S+ + L ++T+
Sbjct: 3 FKGKAWIYEDNIDTDVIIPARYL-----NTTDPKELASHCMEDLDPDFSTKV-------E 50
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
II+AG NFGCGSSREHAP+A+ +AG S VVA S+ARIF+RNS+ G P+
Sbjct: 51 AGDIIVAGNNFGCGSSREHAPLAIKSAGISCVVASSFARIFYRNSINIG--LPILE---- 104
Query: 190 CEECS----TGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARKT 241
C++C+ TGD++ I+ + + N T+G+ ++ +P + + +I+AGG+ YA++
Sbjct: 105 CKDCNKKIKTGDILEIDTDKGIISNITSGEIFEARPFPEFIKGIINAGGLMNYAKEV 161
>gi|225850061|ref|YP_002730295.1| 3-isopropylmalate dehydratase, small subunit [Persephonella marina
EX-H1]
gi|225646073|gb|ACO04259.1| 3-isopropylmalate dehydratase, small subunit [Persephonella marina
EX-H1]
Length = 165
Score = 113 bits (283), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 64/172 (37%), Positives = 96/172 (55%), Gaps = 15/172 (8%)
Query: 69 TFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETK 128
G + GD+I+TD+IIPA YL + ++P E L + + + +
Sbjct: 2 VIEGKVWKFGDDINTDEIIPARYL--ITTDPKE---LAKHVMEDADPEFPNKV------- 49
Query: 129 TKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEAR 188
II+AG NFGCGSSREHAP+AL A A++AES+ARIF+RN++ G P+
Sbjct: 50 KPGDIIVAGKNFGCGSSREHAPLALKGAEIGAIIAESFARIFYRNAINLG--LPIIESPE 107
Query: 189 LCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYAR 239
+ GD++ I++ + + N T GKEY KP+ + L V +AGG+ YA+
Sbjct: 108 AARDAEEGDIIQIDMDKGIIRNVTKGKEYTFKPLPESLRKVFEAGGLMEYAK 159
>gi|333988512|ref|YP_004521119.1| 3-isopropylmalate dehydratase small subunit [Methanobacterium sp.
SWAN-1]
gi|333826656|gb|AEG19318.1| 3-isopropylmalate dehydratase small subunit [Methanobacterium sp.
SWAN-1]
Length = 166
Score = 113 bits (283), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 64/172 (37%), Positives = 97/172 (56%), Gaps = 15/172 (8%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
G + GD++DTD IIP YL L ++L + + G ++ +
Sbjct: 1 MKGKVWKFGDDVDTDVIIPGRYLVLKGE-----KELAEHVMEGSDPDFSKKV-------K 48
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
K II+AG NFGCGSSREHAP+AL AG S VVAES+ARIF+RNS+ G PL +
Sbjct: 49 KGDIIVAGKNFGCGSSREHAPIALKGAGISVVVAESFARIFYRNSINVG--LPLLEAKDI 106
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
+ S GD V I++ + L + T KE++++ + D + +++ GG+ Y ++
Sbjct: 107 SKNISQGDEVEIDMDKEILKDLNTSKEFEVQGLPDFMLEILNKGGLIPYLKE 158
>gi|159905203|ref|YP_001548865.1| 3-isopropylmalate dehydratase, small subunit [Methanococcus
maripaludis C6]
gi|159886696|gb|ABX01633.1| 3-isopropylmalate dehydratase, small subunit [Methanococcus
maripaludis C6]
Length = 167
Score = 113 bits (282), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 64/173 (36%), Positives = 94/173 (54%), Gaps = 15/173 (8%)
Query: 69 TFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETK 128
T G +V GDNIDTD I+PA YL E+L YA+ G + E
Sbjct: 4 TVEGKAWVFGDNIDTDAILPARYLVYTTE-----EQLAKYAMTGTDPEFP-------EKA 51
Query: 129 TKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEAR 188
II+ G NFGCGSSREHAP+ L G S V+AES+ARIF+RNS+ G +PL
Sbjct: 52 AVGDIIVGGKNFGCGSSREHAPIGLKGLGISMVIAESFARIFYRNSINIG--FPLLECKD 109
Query: 189 LCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
+ + GD++ +++ + + N TTG E + + D + +++ GG+ + +K
Sbjct: 110 ISKHVKEGDILRVDLDKGTIKNVTTGAELTGQNLPDFMMEILNNGGLMPHLKK 162
>gi|333910015|ref|YP_004483748.1| 3-isopropylmalate dehydratase small subunit [Methanotorris igneus
Kol 5]
gi|333750604|gb|AEF95683.1| 3-isopropylmalate dehydratase small subunit [Methanotorris igneus
Kol 5]
Length = 168
Score = 112 bits (281), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 62/173 (35%), Positives = 96/173 (55%), Gaps = 15/173 (8%)
Query: 69 TFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETK 128
G +V GDNIDTD I+PA YL E+L +A+ G + +
Sbjct: 5 VIKGRAWVFGDNIDTDAILPARYLVYTTE-----EELAKFAMTGADPDFPKKV------- 52
Query: 129 TKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEAR 188
K II+ G NFGCGSSREHAP+ L AG S V+AES+ARIF+RN++ G PL
Sbjct: 53 KKGDIIVGGKNFGCGSSREHAPIGLKGAGISLVIAESFARIFYRNAINIG--LPLLECKD 110
Query: 189 LCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
+ + GD++ +++ + + N TTG+E K + + + + +++ GG+ + +K
Sbjct: 111 ITKHVKEGDILEVDLDKGIIKNLTTGEELKAQKLPEFMMEILNDGGLMPHLKK 163
>gi|336121120|ref|YP_004575895.1| 3-isopropylmalate dehydratase small subunit [Methanothermococcus
okinawensis IH1]
gi|334855641|gb|AEH06117.1| 3-isopropylmalate dehydratase small subunit [Methanothermococcus
okinawensis IH1]
Length = 168
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/172 (36%), Positives = 94/172 (54%), Gaps = 15/172 (8%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
G +V GDN+DTD I+PA YL E+L YA+ G+ + E
Sbjct: 5 IEGKAWVFGDNVDTDAILPARYLIYTTE-----EELARYAMTGIDPEFP-------EKAN 52
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
K II+ G NFG GSSREHAP+ L G S V+AES+ARIF+RNS+ G PL +
Sbjct: 53 KGDIIVGGKNFGSGSSREHAPMGLKGLGISLVIAESFARIFYRNSINIG--LPLLECKDI 110
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
+ GD++ +++ + N TTG+E K + + D + +++ GG+ + +K
Sbjct: 111 TKHVKEGDILRVDMDNGTITNLTTGEELKGQKLPDFMMEILNDGGLMPHLKK 162
>gi|34558113|ref|NP_907928.1| 3-isopropylmalate dehydratase small subunit [Wolinella succinogenes
DSM 1740]
gi|39931689|sp|Q7M887.1|LEUD_WOLSU RecName: Full=3-isopropylmalate dehydratase small subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|34483831|emb|CAE10828.1| 3-ISOPROPYLMALATE DEHYDRATASE, SMALL SUBUNIT LEUD-1 [Wolinella
succinogenes]
Length = 167
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/170 (39%), Positives = 97/170 (57%), Gaps = 16/170 (9%)
Query: 71 HGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTK 130
G + G+NIDTD II A YL N + + L S+ + + F TK
Sbjct: 5 QGKVWKFGENIDTDLIIAARYL-----NTSDPQVLASHVMEDARPDFLQHF-------TK 52
Query: 131 YKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLC 190
I+AG NFGCGSSREHAPVAL AG SAV+A+S+ARIF+RNS TG P+ E +
Sbjct: 53 GDFIVAGENFGCGSSREHAPVALKTAGVSAVIAKSFARIFYRNSFNTG--LPI-LEVKET 109
Query: 191 EECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYAR 239
+E GD + +++A+ + N T + Y KPI + ++++GG+ +A+
Sbjct: 110 DEIREGDTLEVDMAQGTIKNLTRNQTYAFKPIPPFMMELLESGGLIEHAK 159
>gi|383319987|ref|YP_005380828.1| 3-isopropylmalate dehydratase small subunit [Methanocella conradii
HZ254]
gi|379321357|gb|AFD00310.1| 3-isopropylmalate dehydratase, small subunit [Methanocella conradii
HZ254]
Length = 157
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/171 (41%), Positives = 97/171 (56%), Gaps = 20/171 (11%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
F G + GDN+DTD IIP +YL + LG +A+ GL A + D
Sbjct: 3 FKGRAWKFGDNVDTDVIIPGKYLRTT-----DLRSLGEHAMEGLDAGFKPAPGD------ 51
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
II+AG NFGCGSSRE AP+AL AG S VVA S+ARIFFRN++ G P+ EA +
Sbjct: 52 ---IIVAGKNFGCGSSREQAPMALKYAGISCVVARSFARIFFRNAINVG--LPI-VEANI 105
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYAR 239
C+ +GDVV +++ I G+EY+ + + L ++ AGG+ AY R
Sbjct: 106 CDAVESGDVVEVDLDNG--IVKAGGREYESTRLPEFLQDILKAGGLVAYRR 154
>gi|125974695|ref|YP_001038605.1| 3-isopropylmalate dehydratase, small subunit [Clostridium
thermocellum ATCC 27405]
gi|125714920|gb|ABN53412.1| 3-isopropylmalate dehydratase, small subunit [Clostridium
thermocellum ATCC 27405]
Length = 189
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 97/164 (59%), Gaps = 15/164 (9%)
Query: 78 GDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKIIIAG 137
GDN+DTD IIPA YL S+P+E L + + + + ++ K II+AG
Sbjct: 33 GDNVDTDVIIPARYLN--TSDPNE---LAKHCMEDIDTEFVSKV-------QKGDIIVAG 80
Query: 138 GNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEECSTGD 197
NFGCGSSREHAP+A+ A+G S V+AE++ARIF+RN++ G P+ ++ S GD
Sbjct: 81 KNFGCGSSREHAPIAIKASGISCVIAETFARIFYRNAINIG--LPIIECPEAAKDISDGD 138
Query: 198 VVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
+V+I+ +++N T KEY P + + +I + G+ Y +K
Sbjct: 139 IVSIDFDTGKIVNVTKNKEYTGVPFPEFMQEIIASDGLIGYIKK 182
>gi|298530264|ref|ZP_07017666.1| 3-isopropylmalate dehydratase, small subunit [Desulfonatronospira
thiodismutans ASO3-1]
gi|298509638|gb|EFI33542.1| 3-isopropylmalate dehydratase, small subunit [Desulfonatronospira
thiodismutans ASO3-1]
Length = 163
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/174 (40%), Positives = 96/174 (55%), Gaps = 19/174 (10%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
F G + VGD+IDTD IIPA LV ++P E LG + GL + +R
Sbjct: 3 FKGKAHKVGDHIDTDAIIPAR--CLVTTDPQE---LGRNCMAGLEENWVSRI-------N 50
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPL--DSEA 187
K I++ G NFGCGSSREHAP+A+ AG VVA S+ARIF+RN G + D +
Sbjct: 51 KGDILLGGKNFGCGSSREHAPIAILGAGIPVVVAHSFARIFYRNGFNMGLVLLEVGDEIS 110
Query: 188 RLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
RL S GD + I+ E ++INHTTG P+ + + ++ GG+ Y R+
Sbjct: 111 RL----SDGDELEIKALEGKIINHTTGDTVNSLPVPEFMADILAKGGLINYVRE 160
>gi|255322377|ref|ZP_05363523.1| 3-isopropylmalate dehydratase small subunit [Campylobacter showae
RM3277]
gi|255300750|gb|EET80021.1| 3-isopropylmalate dehydratase small subunit [Campylobacter showae
RM3277]
Length = 160
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/167 (39%), Positives = 97/167 (58%), Gaps = 16/167 (9%)
Query: 74 CYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKI 133
+ GDNIDTD II A YL N + + L ++ + ++ + + +
Sbjct: 6 VWKFGDNIDTDIIIAARYL-----NTSDEKILATHIMEDADPEFSKKI-------SAGDV 53
Query: 134 IIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEEC 193
I+AG NFGCGSSREHAP+AL AAG AV+A+S+ARIF+RNS TG L E + E
Sbjct: 54 IVAGENFGCGSSREHAPLALKAAGIGAVIAKSFARIFYRNSFNTG---LLILEIKETGEI 110
Query: 194 STGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYAR 239
+ GD + I++ ++N T+GKEYK PI + ++ +GG+ YA+
Sbjct: 111 NAGDELKIDVDNGAVVNLTSGKEYKFSPIPPFMQELLKSGGLIEYAK 157
>gi|319937754|ref|ZP_08012157.1| homoaconitase [Coprobacillus sp. 29_1]
gi|319807189|gb|EFW03803.1| homoaconitase [Coprobacillus sp. 29_1]
Length = 164
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/171 (38%), Positives = 95/171 (55%), Gaps = 15/171 (8%)
Query: 71 HGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTK 130
HG GDN+DTD IIPA YL N + ++L S+A+I + T+ R
Sbjct: 4 HGKVLKYGDNVDTDVIIPARYL-----NSFDAKELASHAMIDIDPTFVERV-------EP 51
Query: 131 YKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLC 190
I++AG NFGCGSSREHAP+AL AG S V+A+S+ARIF+RNS+ G + +
Sbjct: 52 GDIMVAGKNFGCGSSREHAPLALKTAGVSCVIAKSFARIFYRNSINIG--FAILECEEAA 109
Query: 191 EECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
+ G+ V ++ ++IN T EY+ +P + L +I A G+ Y +
Sbjct: 110 NDIDEGNEVEVDFDTGKIINKTKNIEYQAQPFPEFLQKMIQANGLVNYVNE 160
>gi|268610788|ref|ZP_06144515.1| 3-isopropylmalate dehydratase, small subunit [Ruminococcus
flavefaciens FD-1]
gi|268611700|ref|ZP_06145427.1| 3-isopropylmalate dehydratase, small subunit [Ruminococcus
flavefaciens FD-1]
Length = 164
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/159 (42%), Positives = 95/159 (59%), Gaps = 15/159 (9%)
Query: 78 GDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKIIIAG 137
GDN+DTD IIPA YL N ++++L S+ + L T+ +R + II AG
Sbjct: 11 GDNVDTDVIIPARYL-----NTSDHKELASHCMEDLDKTFVSRV-------QQGDIITAG 58
Query: 138 GNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEECSTGD 197
NFGCGSSREHAP+A+ A+G S V+A+S+ARIF+RNS+ G EA + S GD
Sbjct: 59 QNFGCGSSREHAPIAIKASGVSLVIAKSFARIFYRNSINIGLAIVECPEA--VDGISEGD 116
Query: 198 VVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIF 235
V ++ + N TTGKEYK +P + + +I+ GG+
Sbjct: 117 KVEADLDSGIIRNLTTGKEYKTEPFPEFVQKIIENGGLM 155
>gi|302336315|ref|YP_003801522.1| 3-isopropylmalate dehydratase small subunit [Olsenella uli DSM
7084]
gi|301320155|gb|ADK68642.1| 3-isopropylmalate dehydratase, small subunit [Olsenella uli DSM
7084]
Length = 169
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/173 (39%), Positives = 99/173 (57%), Gaps = 15/173 (8%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
F G + G +IDTD IIPA YL S+P E L + L L A++ R +T
Sbjct: 3 FKGTAFRYGRDIDTDVIIPARYLNT--SDPAE---LARHCLEDLDASFVGR------VRT 51
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
I++A NFGCGSSREHAPVA+ AAG S V+A+S+ARIF+RN++ G P+
Sbjct: 52 G-DIVVADENFGCGSSREHAPVAIKAAGVSVVIAKSFARIFYRNAINIG--LPIMECPEA 108
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARKT 241
C+ S GDVV ++ + N TTG ++ +P + +I+ GG+ A ++T
Sbjct: 109 CDAISDGDVVRVDADTGLITNETTGATFQAQPFPPFIQEIINEGGLVARTKRT 161
>gi|256005648|ref|ZP_05430606.1| 3-isopropylmalate dehydratase, small subunit [Clostridium
thermocellum DSM 2360]
gi|281418836|ref|ZP_06249855.1| 3-isopropylmalate dehydratase, small subunit [Clostridium
thermocellum JW20]
gi|255990406|gb|EEU00530.1| 3-isopropylmalate dehydratase, small subunit [Clostridium
thermocellum DSM 2360]
gi|281407920|gb|EFB38179.1| 3-isopropylmalate dehydratase, small subunit [Clostridium
thermocellum JW20]
Length = 189
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 62/164 (37%), Positives = 97/164 (59%), Gaps = 15/164 (9%)
Query: 78 GDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKIIIAG 137
GDN+DTD IIPA YL S+P+E L + + + + ++ K I++AG
Sbjct: 33 GDNVDTDVIIPARYLN--TSDPNE---LAKHCMEDIDTEFVSKV-------QKGDIMVAG 80
Query: 138 GNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEECSTGD 197
NFGCGSSREHAP+A+ A+G S V+AE++ARIF+RN++ G P+ ++ S GD
Sbjct: 81 KNFGCGSSREHAPIAIKASGISCVIAETFARIFYRNAINIG--LPIIECPEAAKDISDGD 138
Query: 198 VVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
+V+I+ +++N T KEY P + + +I + G+ Y +K
Sbjct: 139 IVSIDFDTGKIVNVTKNKEYTGVPFPEFMQEIIASDGLIGYIKK 182
>gi|374636918|ref|ZP_09708456.1| 3-isopropylmalate dehydratase, small subunit [Methanotorris
formicicus Mc-S-70]
gi|373557458|gb|EHP83874.1| 3-isopropylmalate dehydratase, small subunit [Methanotorris
formicicus Mc-S-70]
Length = 169
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 95/170 (55%), Gaps = 15/170 (8%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + GDNIDTD I+PA YL E+L +A+ G + + K
Sbjct: 8 GRVWKFGDNIDTDAILPARYLVYTTE-----EELAKFAMTGADPDFPKKV-------KKG 55
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
II+ G NFGCGSSREHAP+ L AG S V+AES+ARIF+RN++ G PL + +
Sbjct: 56 DIIVGGKNFGCGSSREHAPIGLKGAGISLVIAESFARIFYRNAINIG--LPLLECKDISK 113
Query: 192 ECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
GD++ +++ + + N TTG+E K + + + + +++ GG+ + +K
Sbjct: 114 HVKEGDILEVDLDKGTIKNLTTGEELKAQKLPEFMMEILNDGGLMPHLKK 163
>gi|332296016|ref|YP_004437939.1| 3-isopropylmalate dehydratase small subunit [Thermodesulfobium
narugense DSM 14796]
gi|332179119|gb|AEE14808.1| 3-isopropylmalate dehydratase small subunit [Thermodesulfobium
narugense DSM 14796]
Length = 165
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/172 (39%), Positives = 92/172 (53%), Gaps = 15/172 (8%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
G V G+NIDTD II A YL +N E K L F++E
Sbjct: 3 LEGAARVFGNNIDTDLIIAARYLA--ETNEVELGK-------NLFKDLRPNFVNE---MN 50
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
K II+AG NFGCGSSREHAP+A+ AG SAV+A S+ARIFFRN++ G P+ +
Sbjct: 51 KGDIIVAGNNFGCGSSREHAPLAIKGAGISAVIANSFARIFFRNAINVG--LPIFVTSEN 108
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
GD+++I +E L+N T K YK P + L ++ GG+F + +
Sbjct: 109 LSSIEEGDMLSINASEGILLNKTKNKTYKFDPYPEFLLNLVQIGGLFNFTKN 160
>gi|300087778|ref|YP_003758300.1| 3-isopropylmalate dehydratase small subunit [Dehalogenimonas
lykanthroporepellens BL-DC-9]
gi|299527511|gb|ADJ25979.1| 3-isopropylmalate dehydratase, small subunit [Dehalogenimonas
lykanthroporepellens BL-DC-9]
Length = 168
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/173 (41%), Positives = 94/173 (54%), Gaps = 19/173 (10%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFID-ENETK 128
G + G N+DTD IIPA YL + S PDE A + ID E +K
Sbjct: 2 LKGFVHKYGANVDTDAIIPARYLNV--STPDEL------------ARHCMEDIDLEFVSK 47
Query: 129 TK-YKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEA 187
K II+A NFGCGSSREHAP+A+ A+G SAV+A+S+ARIFFRN++ G PL
Sbjct: 48 VKPGDIIVATSNFGCGSSREHAPIAIKASGVSAVIADSFARIFFRNAINIG--LPLLESP 105
Query: 188 RLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYAR 239
TGD + I++A + N T G + KP + + +I AGG+ Y R
Sbjct: 106 EAVSATETGDELEIDLASGTIRNTTRGLSFSAKPYPEFMSQIIQAGGLIEYTR 158
>gi|336476035|ref|YP_004615176.1| 3-isopropylmalate dehydratase small subunit [Methanosalsum zhilinae
DSM 4017]
gi|335929416|gb|AEH59957.1| 3-isopropylmalate dehydratase, small subunit [Methanosalsum
zhilinae DSM 4017]
Length = 160
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/170 (39%), Positives = 96/170 (56%), Gaps = 16/170 (9%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + G++IDTD IIP YL L S E L +A G+ + E K K
Sbjct: 3 GRAWKFGNDIDTDAIIPGRYLILNTS-----EDLAKHAFEGVRPEFA------KEVK-KG 50
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
I++A NFGCGSSREHAP+AL G S V+A+S+ARIFFRN++ G + L E
Sbjct: 51 DIVVAESNFGCGSSREHAPLALKGTGISCVIAKSFARIFFRNAINIGVPLLECPDTHLIE 110
Query: 192 ECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
+ DV+ ++I+ + NHT ++Y+ P+ D + ++DAGG+ Y RK
Sbjct: 111 D---KDVIEVDISTGIIKNHTKNEQYQATPLPDFVREIVDAGGLIEYTRK 157
>gi|325957928|ref|YP_004289394.1| 3-isopropylmalate dehydratase small subunit [Methanobacterium sp.
AL-21]
gi|325329360|gb|ADZ08422.1| 3-isopropylmalate dehydratase small subunit [Methanobacterium sp.
AL-21]
Length = 165
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/172 (38%), Positives = 101/172 (58%), Gaps = 17/172 (9%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
G + GD++DTD IIP YL L DE E L + + G ++ E +
Sbjct: 1 MKGKVWKFGDDVDTDIIIPGRYLVL----RDEKE-LAACVMEGCDPDFS-------EKVS 48
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
+ II+AG NFGCGSSREHAP+A+ AG +AVVAES+ARIF+RNS+ G PL +
Sbjct: 49 EGDIIVAGKNFGCGSSREHAPIAIKGAGVAAVVAESFARIFYRNSINIG--LPLIEAKNV 106
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLK--PIGDLGPVIDAGGIFAYAR 239
+ S GD++ I++ + L + T +E+++K P+ LG +++ GG+ Y +
Sbjct: 107 SKSVSEGDIIEIDVDKGILKDLDTSEEFEIKPLPVFMLG-IMNEGGLINYLK 157
>gi|147920550|ref|YP_685654.1| 3-isopropylmalate dehydratase, small subunit [Methanocella
arvoryzae MRE50]
gi|110621050|emb|CAJ36328.1| 3-isopropylmalate dehydratase, small subunit [Methanocella
arvoryzae MRE50]
Length = 186
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/174 (37%), Positives = 101/174 (58%), Gaps = 18/174 (10%)
Query: 75 YVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKII 134
+ GD++DTD +IP +L + ++P E L +A G+ + E +I
Sbjct: 7 WKFGDDVDTDAVIPGRFLII--NDPRE---LAKHAFEGVRPEF-------REKVKPGDVI 54
Query: 135 IAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEECS 194
+AG NFGCGSSREHAP+AL AG V+A+S+ARIFFRNS+ G E ++ S
Sbjct: 55 VAGENFGCGSSREHAPLALKGAGVRCVIAKSFARIFFRNSINIGVTL---LECPDTDKIS 111
Query: 195 TGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARKTGMIASR 247
GDV+ I+ + ++N T ++Y++ P+ + L ++ +GG+ YARK M+ SR
Sbjct: 112 EGDVLEIDEKKGVILNKTKKEKYRVTPVPEFLAEIVQSGGLIEYARK--MVDSR 163
>gi|385780149|ref|YP_005689314.1| 3-isopropylmalate dehydratase small subunit [Clostridium
thermocellum DSM 1313]
gi|419721903|ref|ZP_14249056.1| 3-isopropylmalate dehydratase small subunit [Clostridium
thermocellum AD2]
gi|419726725|ref|ZP_14253746.1| 3-isopropylmalate dehydratase small subunit [Clostridium
thermocellum YS]
gi|316941829|gb|ADU75863.1| 3-isopropylmalate dehydratase, small subunit [Clostridium
thermocellum DSM 1313]
gi|380770009|gb|EIC03908.1| 3-isopropylmalate dehydratase small subunit [Clostridium
thermocellum YS]
gi|380782056|gb|EIC11701.1| 3-isopropylmalate dehydratase small subunit [Clostridium
thermocellum AD2]
Length = 167
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 62/164 (37%), Positives = 97/164 (59%), Gaps = 15/164 (9%)
Query: 78 GDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKIIIAG 137
GDN+DTD IIPA YL S+P+E L + + + + ++ K I++AG
Sbjct: 11 GDNVDTDVIIPARYLNT--SDPNE---LAKHCMEDIDTEFVSKV-------QKGDIMVAG 58
Query: 138 GNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEECSTGD 197
NFGCGSSREHAP+A+ A+G S V+AE++ARIF+RN++ G P+ ++ S GD
Sbjct: 59 KNFGCGSSREHAPIAIKASGISCVIAETFARIFYRNAINIG--LPIIECPEAAKDISDGD 116
Query: 198 VVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
+V+I+ +++N T KEY P + + +I + G+ Y +K
Sbjct: 117 IVSIDFDTGKIVNVTKNKEYTGVPFPEFMQEIIASDGLIGYIKK 160
>gi|312126891|ref|YP_003991765.1| 3-isopropylmalate dehydratase, small subunit [Caldicellulosiruptor
hydrothermalis 108]
gi|312621637|ref|YP_004023250.1| 3-isopropylmalate dehydratase, small subunit [Caldicellulosiruptor
kronotskyensis 2002]
gi|311776910|gb|ADQ06396.1| 3-isopropylmalate dehydratase, small subunit [Caldicellulosiruptor
hydrothermalis 108]
gi|312202104|gb|ADQ45431.1| 3-isopropylmalate dehydratase, small subunit [Caldicellulosiruptor
kronotskyensis 2002]
Length = 166
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/171 (38%), Positives = 95/171 (55%), Gaps = 15/171 (8%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
F G + DNIDTD IIPA YL S+P+E L + L L + +
Sbjct: 3 FKGKAHKYYDNIDTDVIIPARYLN--TSDPNE---LAKHCLEDLDKEFVNKV-------Q 50
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
K I++AG NFGCGSSREHAP+A+ A G S VVA+S+ARIF+RN++ G P+
Sbjct: 51 KGDILVAGKNFGCGSSREHAPIAIKACGVSCVVAKSFARIFYRNAINIG--LPIVECEEA 108
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYAR 239
+ GD V +++ + N T GKE+K KP + + ++ AGG+ + +
Sbjct: 109 VDGIEAGDEVEVDLVNGIIKNLTKGKEFKAKPFPEFMQNIMKAGGLIEFVK 159
>gi|224373268|ref|YP_002607640.1| 3-isopropylmalate dehydratase, small subunit [Nautilia profundicola
AmH]
gi|259494455|sp|B9L5K2.1|LEUD_NAUPA RecName: Full=3-isopropylmalate dehydratase small subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|223589279|gb|ACM93015.1| 3-isopropylmalate dehydratase, small subunit [Nautilia profundicola
AmH]
Length = 166
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/171 (40%), Positives = 99/171 (57%), Gaps = 16/171 (9%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + GDNIDTD IIPA YL S+P E L + + + ++
Sbjct: 6 GRVWKFGDNIDTDLIIPARYLNT--SDPHE---LAKHVMEDADPEFPSKV-------RPG 53
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
II+AG NFG GSSREHAP+AL AAG +AV+A+S+ARIF+RNS G P+ E +
Sbjct: 54 DIIVAGYNFGSGSSREHAPIALKAAGVAAVIAKSFARIFYRNSFNMG--LPI-FELLESD 110
Query: 192 ECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARKT 241
E + GD++ I++ + N TGK+YK PI + + +I AGG+ +A++
Sbjct: 111 EINEGDLIKIDLDNGIIHNVDTGKDYKFTPIPEFMQELIAAGGLINFAKEM 161
>gi|223040796|ref|ZP_03611063.1| 3-isopropylmalate dehydratase small subunit (isopropylmalate
isomerase) (alpha-ipm isomerase) (ipmi) [Campylobacter
rectus RM3267]
gi|222877986|gb|EEF13100.1| 3-isopropylmalate dehydratase small subunit (isopropylmalate
isomerase) (alpha-ipm isomerase) (ipmi) [Campylobacter
rectus RM3267]
Length = 160
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/167 (38%), Positives = 97/167 (58%), Gaps = 16/167 (9%)
Query: 74 CYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKI 133
+ GDNIDTD II A YL N + + L ++ + ++ + + +
Sbjct: 6 VWKFGDNIDTDIIIAARYL-----NTSDEKILATHIMEDADPEFSKKI-------SVGDV 53
Query: 134 IIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEEC 193
I+AG NFGCGSSREHAP+AL AAG AV+A+S+ARIF+RNS TG L E + +E
Sbjct: 54 IVAGENFGCGSSREHAPLALKAAGIGAVIAKSFARIFYRNSFNTG---LLILEIKETDEI 110
Query: 194 STGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYAR 239
+ GD + I + ++N T+GKEY+ PI + ++ +GG+ YA+
Sbjct: 111 NAGDELKINVDNGAVVNLTSGKEYEFSPIPPFMQELLKSGGLIEYAK 157
>gi|325282804|ref|YP_004255345.1| 3-isopropylmalate dehydratase small subunit [Deinococcus
proteolyticus MRP]
gi|324314613|gb|ADY25728.1| 3-isopropylmalate dehydratase small subunit [Deinococcus
proteolyticus MRP]
Length = 246
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/196 (37%), Positives = 104/196 (53%), Gaps = 16/196 (8%)
Query: 46 QRAVSVIPKATSADSRATKEPTATFHGLCYVVG-DNIDTDQIIPAEYLTLVPSNPDEYEK 104
QR+ P + T +P +V G D+I+TD+IIPA YLT D E+
Sbjct: 5 QRSTRPAPARGTQTRTHTLQPMTARTARVHVFGRDHINTDEIIPARYLTT-----DREEE 59
Query: 105 LGSYALIGLPATYTTRFIDENETKTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAE 164
L YA+ Y +F+ + + I+IAG +FGCGSSREHA AL AG SAV+A
Sbjct: 60 LAPYAM----QDYDPQFV---QRVGQGDIVIAGADFGCGSSREHAVWALRGAGVSAVLAP 112
Query: 165 SYARIFFRNSVATGEIYPLDSEARLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD 224
++ARIF+RN++ G +P A + E S GD T+++ + N TTG+E + P+ D
Sbjct: 113 NFARIFYRNAINNG--FPALECAGIEELFSDGDEATLDLEAGTIRNETTGRELRFTPLPD 170
Query: 225 LGPVID-AGGIFAYAR 239
+ AGG Y R
Sbjct: 171 FALAVKAAGGWLEYMR 186
>gi|149194276|ref|ZP_01871373.1| 3-isopropylmalate dehydratase, small subunit [Caminibacter
mediatlanticus TB-2]
gi|149135451|gb|EDM23930.1| 3-isopropylmalate dehydratase, small subunit [Caminibacter
mediatlanticus TB-2]
Length = 169
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 71/170 (41%), Positives = 97/170 (57%), Gaps = 16/170 (9%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + GDNIDTD IIPA YL S+P E L + + + +
Sbjct: 6 GRVWKFGDNIDTDLIIPARYLNT--SDPHE---LAKHVMEDADPEFPKKV-------RPG 53
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
II+AG NFG GSSREHAP+AL AAG SAV+A+S+ARIF+RNS G P+ E +
Sbjct: 54 DIIVAGYNFGSGSSREHAPIALKAAGISAVIAKSFARIFYRNSFNMG--LPI-FELLESD 110
Query: 192 ECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
E + GD++ I++ + + N TGK YK PI + +I AGG+ YA++
Sbjct: 111 EINEGDLIKIDLDKGIIHNVDTGKNYKFAPIPPFMQNLIAAGGLINYAKE 160
>gi|332158982|ref|YP_004424261.1| 3-isopropylmalate dehydratase small subunit [Pyrococcus sp. NA2]
gi|331034445|gb|AEC52257.1| 3-isopropylmalate dehydratase small subunit [Pyrococcus sp. NA2]
Length = 164
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 69/174 (39%), Positives = 97/174 (55%), Gaps = 21/174 (12%)
Query: 71 HGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTK 130
G + GDNIDTD IIPA YL S+P E L + L L + E + K
Sbjct: 4 RGRAWKYGDNIDTDVIIPARYLNT--SDPRE---LAKHVLEDL----------DPEFRKK 48
Query: 131 YK---IIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEA 187
K II+AG NFGCGSSREHAP+A+ AAG S V+A+S+ARIF+RN++ G P+
Sbjct: 49 MKPGDIIVAGENFGCGSSREHAPLAIKAAGVSCVIAKSFARIFYRNAINIG--LPILESP 106
Query: 188 RLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
E TGD + ++ + + N T G+ Y+ P + +I AGG+ +A++
Sbjct: 107 EAVERIETGDELLVDFSNGIIENLTKGEVYRANPFPPFIMSIIKAGGLIEWAKR 160
>gi|222530067|ref|YP_002573949.1| 3-isopropylmalate dehydratase small subunit [Caldicellulosiruptor
bescii DSM 6725]
gi|259494351|sp|B9MLV3.1|LEUD_ANATD RecName: Full=3-isopropylmalate dehydratase small subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|222456914|gb|ACM61176.1| 3-isopropylmalate dehydratase, small subunit [Caldicellulosiruptor
bescii DSM 6725]
Length = 166
Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 65/171 (38%), Positives = 95/171 (55%), Gaps = 15/171 (8%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
F G + DNIDTD IIPA YL S+P+E L + L L + +
Sbjct: 3 FKGKAHKYYDNIDTDVIIPARYLN--TSDPNE---LAKHCLEDLDKEFVNKV-------Q 50
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
K I++AG NFGCGSSREHAP+A+ A G S V+A+S+ARIF+RN++ G P+
Sbjct: 51 KGDILVAGKNFGCGSSREHAPIAIKACGVSCVIAKSFARIFYRNAINIG--LPIVECEEA 108
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYAR 239
+ GD V +++ + N T GKE+K KP + + ++ AGG+ + +
Sbjct: 109 VDGIEAGDEVEVDLVNGIIKNLTKGKEFKAKPFPEFMQNIMKAGGLIEFVK 159
>gi|348026763|ref|YP_004766568.1| 3-isopropylmalate dehydratase [Megasphaera elsdenii DSM 20460]
gi|341822817|emb|CCC73741.1| 3-isopropylmalate dehydratase [Megasphaera elsdenii DSM 20460]
Length = 162
Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 102/174 (58%), Gaps = 15/174 (8%)
Query: 69 TFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETK 128
T G + GDNIDTD IIPA YL N + ++L ++ ++ + T+ + E +
Sbjct: 2 TLEGKVWRYGDNIDTDVIIPARYL-----NSFDPKELATHCMVDIDETFAGN-VKEGD-- 53
Query: 129 TKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEAR 188
I++ G NFGCGSSREHAP+A+ A+G V+A S+ARIF+RN++ G P
Sbjct: 54 ----IMVGGHNFGCGSSREHAPIAIKASGVPVVIAASFARIFYRNAINVG--LPALEIGD 107
Query: 189 LCEECSTGDVVTIEIAESRLINHTTGKEYKLKPI-GDLGPVIDAGGIFAYARKT 241
E+ GD+++I+++ ++I+ TTG ++ P+ G + + AGG+ Y +++
Sbjct: 108 DVEKIKAGDILSIDLSTGKIIDKTTGDTFQAPPLPGFIQDIAQAGGLINYVKES 161
>gi|448733230|ref|ZP_21715475.1| 3-isopropylmalate dehydratase, small subunit [Halococcus
salifodinae DSM 8989]
gi|445802964|gb|EMA53264.1| 3-isopropylmalate dehydratase, small subunit [Halococcus
salifodinae DSM 8989]
Length = 167
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 64/173 (36%), Positives = 101/173 (58%), Gaps = 22/173 (12%)
Query: 71 HGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTK 130
HG + GD+IDTDQI P+ ++ V S+P E+L +A L + ++
Sbjct: 7 HGQAWTFGDDIDTDQITPSRFI--VSSDP---EELAEHAFEDLRPAFAAEV-------SE 54
Query: 131 YKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLC 190
++AG NFG GSSREHAP++L AG S +VA+S+ARIFFRN++ G P+ +C
Sbjct: 55 GDYVVAGHNFGSGSSREHAPLSLIGAGVSGIVAQSFARIFFRNALNLG--LPV----MIC 108
Query: 191 ---EECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYAR 239
++ GD V+I++ + + NHTT + Y +P+ + L ++D GG+ AY +
Sbjct: 109 PAADQIDDGDDVSIDLGDGLVHNHTTDETYDAEPLPEFLQSLVDEGGLKAYTK 161
>gi|291458974|ref|ZP_06598364.1| 3-isopropylmalate dehydratase, small subunit [Oribacterium sp. oral
taxon 078 str. F0262]
gi|291418228|gb|EFE91947.1| 3-isopropylmalate dehydratase, small subunit [Oribacterium sp. oral
taxon 078 str. F0262]
Length = 193
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 66/173 (38%), Positives = 94/173 (54%), Gaps = 15/173 (8%)
Query: 65 EPTATFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDE 124
E T G GDNIDTD IIPA YL ++ + E+L S+A+ L + +
Sbjct: 26 ERMKTLEGRSVKYGDNIDTDVIIPARYLAIL-----DREELASHAMEDLDPDFRKKL--- 77
Query: 125 NETKTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLD 184
I++AG NFGCGSSREHAP L ++G V+AES+ARIF+RN++ G P+
Sbjct: 78 ----EPGGILVAGRNFGCGSSREHAPQVLQSSGVGCVIAESFARIFYRNALNIG--LPIV 131
Query: 185 SEARLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFA 236
E GD V+++ + + TTGK+YK+ P L +I+ GG+ A
Sbjct: 132 EAPEAAREIREGDRVSVDFERGSIRDLTTGKDYKVFPFPPFLQRMIEKGGLMA 184
>gi|242310129|ref|ZP_04809284.1| 3-isopropylmalate dehydratase small subunit [Helicobacter pullorum
MIT 98-5489]
gi|239523426|gb|EEQ63292.1| 3-isopropylmalate dehydratase small subunit [Helicobacter pullorum
MIT 98-5489]
Length = 166
Score = 110 bits (274), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 68/171 (39%), Positives = 97/171 (56%), Gaps = 16/171 (9%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
G + GDNIDTD II A YL N + + L S+ + A +T +
Sbjct: 1 MQGKAWKFGDNIDTDLIIAARYL-----NTSDEKFLASHLMEDARANFTQEI-------S 48
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
K II+AG NFGCGSSREHAPVA+ AAG +AV+A+SYARIF+RN+ TG P+ E +
Sbjct: 49 KGDIIVAGENFGCGSSREHAPVAIKAAGIAAVIAKSYARIFYRNAFNTG--LPI-LEIKE 105
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYAR 239
+ + GDV+ I++ + N T +Y PI + +++ GG+ YA+
Sbjct: 106 TDLINEGDVLEIDLKAGIIHNQTQKTQYHFTPIPPFMLELLECGGLIPYAK 156
>gi|91773592|ref|YP_566284.1| 3-isopropylmalate dehydratase small subunit [Methanococcoides
burtonii DSM 6242]
gi|91712607|gb|ABE52534.1| 3-Isopropylmalate dehydratase small subunit and homoaconitase small
subunit - dual specificity [Methanococcoides burtonii
DSM 6242]
Length = 160
Score = 110 bits (274), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 64/172 (37%), Positives = 99/172 (57%), Gaps = 16/172 (9%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
G + GD++DTD +IP YL + + P+E L Y +G+ + + EN+
Sbjct: 1 MKGRVWKFGDDVDTDAVIPGRYLVM--NTPEE---LAPYTFVGVRPEFAGN-VKEND--- 51
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
I++AG NFGCGSSREHAP+AL + V+A+S+ARIFFRN++ G E
Sbjct: 52 ---IVVAGNNFGCGSSREHAPIALKGSKIGCVIAKSFARIFFRNAINIGVAL---LECPE 105
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
++ GD +T++IA + N T G++Y+ P+ D + ++DAGG+ Y RK
Sbjct: 106 TDKIEDGDELTVDIASGIIENLTKGEKYQAIPLPDFVRGIVDAGGLKEYTRK 157
>gi|374849889|dbj|BAL52892.1| 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit
[uncultured prokaryote]
Length = 167
Score = 110 bits (274), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 64/171 (37%), Positives = 95/171 (55%), Gaps = 15/171 (8%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
FHG +V GDNIDTD IIP YL N + ++L ++ + G+ + +
Sbjct: 3 FHGRAWVFGDNIDTDVIIPGRYL-----NTTDPKELAAHCMEGIDPEFPRKV-------Q 50
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
I++AG NFG GSSREHAP++L AAG S V+A+S+ARIFFRN++ G P+
Sbjct: 51 PGDIVVAGRNFGSGSSREHAPISLKAAGVSCVIAKSFARIFFRNAINIG--LPVLECPEA 108
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYAR 239
E + GD + + + + N TG+ ++ KP + +I AGG+ Y R
Sbjct: 109 VEAIAPGDELEVHLDTGEIHNRRTGQTFRAKPYPPFMLELIRAGGLIPYTR 159
>gi|78358260|ref|YP_389709.1| 3-isopropylmalate dehydratase small subunit [Desulfovibrio
alaskensis G20]
gi|123551503|sp|Q30WD2.1|LEUD_DESDG RecName: Full=3-isopropylmalate dehydratase small subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|78220665|gb|ABB40014.1| 3-isopropylmalate dehydratase, small subunit [Desulfovibrio
alaskensis G20]
Length = 167
Score = 109 bits (273), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 65/172 (37%), Positives = 96/172 (55%), Gaps = 15/172 (8%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
++G VGD+IDTD IIPA +L V ++P +LG+ + GL + +R
Sbjct: 3 YNGTARKVGDHIDTDAIIPARFL--VTTDP---AQLGANCMEGLEHGWVSRV-------Q 50
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
+ I++ G NFGCGSSREHAP+A+ AG VVA S+ARIF+RN G I L
Sbjct: 51 QGDIMVGGKNFGCGSSREHAPIAILGAGMPVVVAHSFARIFYRNGFNMGLI--LIEIGDD 108
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
+ GDV+++++ R+ NHTTG P+ + ++D GG+ Y R+
Sbjct: 109 ADRIHDGDVLSVDVENGRITNHTTGDVISCPPLPPFMHDILDKGGLVPYVRE 160
>gi|227498841|ref|ZP_03928981.1| homoaconitase [Acidaminococcus sp. D21]
gi|352685753|ref|YP_004897738.1| homoaconitase [Acidaminococcus intestini RyC-MR95]
gi|226904293|gb|EEH90211.1| homoaconitase [Acidaminococcus sp. D21]
gi|350280408|gb|AEQ23598.1| homoaconitase [Acidaminococcus intestini RyC-MR95]
Length = 163
Score = 109 bits (273), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 100/172 (58%), Gaps = 15/172 (8%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
+ G + GDNIDTD IIPA YL N + ++L S+ ++ + ++ E K
Sbjct: 3 YEGKTWTYGDNIDTDVIIPARYL-----NSFDPKELASHCMVDIDESFA------KEVKA 51
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
I++ G NFGCGSSREHAP+A+ A+G ++A S+ARIF+RN++ G P+
Sbjct: 52 G-DIMVGGWNFGCGSSREHAPIAIKASGVPVIIAASFARIFYRNAINVG--LPVLEIGND 108
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
++ GD+++++I+ + + TTG +K P+ D + + AGG+ AY ++
Sbjct: 109 VKKIRKGDILSVDISTGTIADKTTGDTFKAPPLPDFIQGIASAGGLIAYVKE 160
>gi|73668865|ref|YP_304880.1| 3-isopropylmalate dehydratase small subunit [Methanosarcina barkeri
str. Fusaro]
gi|72396027|gb|AAZ70300.1| 3-isopropylmalate dehydratase, small subunit [Methanosarcina
barkeri str. Fusaro]
Length = 162
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/172 (37%), Positives = 99/172 (57%), Gaps = 16/172 (9%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
G + GD++DTD +IP YL + + P+E L Y G+ + + + EN+
Sbjct: 1 MKGRAWKFGDDVDTDAVIPGRYL--IYNTPEE---LAKYTFEGVRPEFAKK-VHEND--- 51
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
I++AG NFGCGSSREHAP+AL A + V+A+S+ARIFFRNS+ G P+ E
Sbjct: 52 ---IVVAGNNFGCGSSREHAPLALKGAKVACVIAKSFARIFFRNSINIG--VPV-LECPD 105
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
+ GD + ++++ + N T G+ Y+ P+ D + ++D GG+ YARK
Sbjct: 106 TDRIDDGDELEVDLSTGVIENKTKGETYQATPLPDFVREIVDEGGLIEYARK 157
>gi|374315442|ref|YP_005061870.1| 3-isopropylmalate dehydratase small subunit [Sphaerochaeta
pleomorpha str. Grapes]
gi|359351086|gb|AEV28860.1| 3-isopropylmalate dehydratase, small subunit [Sphaerochaeta
pleomorpha str. Grapes]
Length = 167
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 96/170 (56%), Gaps = 15/170 (8%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + GDN+DTD IIPA YL N +++L S+ + + A + +
Sbjct: 5 GSVFRYGDNVDTDVIIPARYL-----NTSNHKELASHCMEDIDADFIKQV-------KSG 52
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
II+A NFGCGSSREHAP+A+ +G S V+A ++ARIF+RNS+ G P+ C+
Sbjct: 53 DIIVADKNFGCGSSREHAPIAIKESGISCVIARTFARIFYRNSINIG--LPILECPEACD 110
Query: 192 ECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
GDVV+++ + ++ + T+GK ++ +P + +I AGG+ Y K
Sbjct: 111 SIKAGDVVSVDFSTGKITDETSGKTFQAEPFPPFMQDLIAAGGLAGYISK 160
>gi|221633666|ref|YP_002522892.1| 3-isopropylmalate dehydratase small subunit [Thermomicrobium roseum
DSM 5159]
gi|221157190|gb|ACM06317.1| 3-isopropylmalate dehydratase, small subunit [Thermomicrobium
roseum DSM 5159]
Length = 172
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/172 (39%), Positives = 91/172 (52%), Gaps = 15/172 (8%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
G + GDNIDTD IIPA YL + +P E L + + + + ++
Sbjct: 3 MRGRVWKFGDNIDTDVIIPARYLVTI--DPQE---LAQHVMEDIDPEFASKV-------Q 50
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
II+AG NFGCGSSREHAP+A+ AAG AVVAES+ARIFFRN++ G P+
Sbjct: 51 PGDIIVAGRNFGCGSSREHAPIAIKAAGVQAVVAESFARIFFRNAINIG--LPVVEAPEA 108
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
E TGD + I+ + N TGK YK + +I AGG+ R+
Sbjct: 109 VRETETGDELEIDTENGIVRNLRTGKTYKATQYDAFIQHIIRAGGLLNAVRE 160
>gi|78777300|ref|YP_393615.1| 3-isopropylmalate dehydratase small subunit [Sulfurimonas
denitrificans DSM 1251]
gi|123550266|sp|Q30RK1.1|LEUD_SULDN RecName: Full=3-isopropylmalate dehydratase small subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|78497840|gb|ABB44380.1| 3-isopropylmalate dehydratase, small subunit [Sulfurimonas
denitrificans DSM 1251]
Length = 167
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/175 (38%), Positives = 97/175 (55%), Gaps = 20/175 (11%)
Query: 68 ATFHGLCYVVGDNIDTDQIIPAEYL-TLVPSNPDEYEKLGSYALIGLPATYTTRFIDENE 126
A G + G +IDTD II A YL T VP E+L + + + +
Sbjct: 4 ANIDGKVWRFGKDIDTDLIIAARYLSTSVP------EELAKHVMEDADPQFVKKM----- 52
Query: 127 TKTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG-EIYPLDS 185
+ II+AG NFGCGSSREHAP+AL AAG +AV+A ++ARIF+RN+ G I+ L
Sbjct: 53 --SSGDIIVAGENFGCGSSREHAPIALKAAGVAAVIAPTFARIFYRNAFNMGLPIFELQE 110
Query: 186 EARLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYAR 239
A + E GD +++++ + N T+ K YK PI + +IDAGG+ +A+
Sbjct: 111 SAEIAE----GDEISVDMNNGTITNKTSSKVYKFIPIPQFMQELIDAGGLMNFAQ 161
>gi|45357944|ref|NP_987501.1| 3-isopropylmalate dehydratase small subunit [Methanococcus
maripaludis S2]
gi|44920701|emb|CAF29937.1| 3-isopropylmalate dehydratase small subunit Related [Methanococcus
maripaludis S2]
Length = 161
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 97/169 (57%), Gaps = 15/169 (8%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G ++ GD+IDTD IIP YL DEYE L S+ + G+ + R D +
Sbjct: 5 GKVHLFGDDIDTDAIIPGAYL----KTTDEYE-LASHCMAGIDENFPERVEDGD------ 53
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
++AG NFGCGSSRE AP+A+ G A++ ES+ARIF+RN + G ++P++ + + +
Sbjct: 54 -FLVAGENFGCGSSREQAPIAIKYCGIKAIIVESFARIFYRNCINLG-VFPIECKG-ISK 110
Query: 192 ECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLGPVIDAGGIFAYARK 240
GDV+ +++ E ++I T + L P G ++D GG+ YA+K
Sbjct: 111 HVKDGDVIELDLEEKKVILKDTVLDCNL-PTGTAKDIMDEGGLINYAKK 158
>gi|169335474|ref|ZP_02862667.1| hypothetical protein ANASTE_01888 [Anaerofustis stercorihominis DSM
17244]
gi|169258212|gb|EDS72178.1| 3-isopropylmalate dehydratase, small subunit [Anaerofustis
stercorihominis DSM 17244]
Length = 164
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/173 (39%), Positives = 97/173 (56%), Gaps = 19/173 (10%)
Query: 71 HGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETK-- 128
G + GDN+DTD IIPA YL + S+ DE L Y +I IDEN K
Sbjct: 4 KGKVFKYGDNVDTDVIIPARYLNV--SSGDE---LAKYCMID---------IDENFVKEV 49
Query: 129 TKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEAR 188
K II+A NFGCGSSREHAP+A+ AG S V+A ++ARIF+RN++ G P+
Sbjct: 50 NKGDIIVATKNFGCGSSREHAPLAIKCAGVSCVIASTFARIFYRNAINIG--LPILECEE 107
Query: 189 LCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
+ GD V ++ + N TTGK Y+ +P + + +++AGG+ Y ++
Sbjct: 108 AANDIKAGDEVKVDFDSGVITNITTGKTYQAEPFPEFMQKIMNAGGLVEYTKE 160
>gi|91200639|emb|CAJ73689.1| similar to 3-isopropylmalate dehydratase, small chain [Candidatus
Kuenenia stuttgartiensis]
Length = 162
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 97/167 (58%), Gaps = 15/167 (8%)
Query: 74 CYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKI 133
C+ G+NI+TD+IIPA YL ++P+E L + + + + + +
Sbjct: 5 CWKFGNNINTDEIIPARYLNT--TDPNE---LAKHCMEDADPDFIKKI-------KQGDV 52
Query: 134 IIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEEC 193
I+AG NFGCGSSREHAP+A+ AAG S V+A+S+ARIFFRN++ G + EA +
Sbjct: 53 IVAGENFGCGSSREHAPIAIKAAGISCVIAKSFARIFFRNAINIGLLIFECPEA--ADNI 110
Query: 194 STGDVVTIEIAESRLINHTTGKEYKLKPI-GDLGPVIDAGGIFAYAR 239
GD + +++ +S + +HT + + +P ++ +I +GG+ + +
Sbjct: 111 KEGDEIEVDLTKSEIFDHTLNRRFTFEPFPHEMQEIIQSGGLMNFVK 157
>gi|327398613|ref|YP_004339482.1| 3-isopropylmalate dehydratase small subunit [Hippea maritima DSM
10411]
gi|327181242|gb|AEA33423.1| 3-isopropylmalate dehydratase small subunit [Hippea maritima DSM
10411]
Length = 163
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/172 (38%), Positives = 101/172 (58%), Gaps = 20/172 (11%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETK--T 129
G +V DN+DTD IIPA YL S+P E A + IDEN K
Sbjct: 5 GRVWVYPDNVDTDVIIPARYLN--TSDPAEL------------AKHCMEDIDENFAKEVK 50
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
+ II+AG NFG GSSREHAP+A+ A+G S V+A+S++RIF+RN+ G P+ E+ +
Sbjct: 51 EGDIIVAGYNFGSGSSREHAPIAIKASGVSCVIAKSFSRIFYRNAFNIG--LPI-LESNV 107
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
+E GD + ++ +E +++ GK +K I + + +I++GG+F YA+K
Sbjct: 108 VDELEKGDEIEVDTSEGKIMVLKNGKVFKSSVIPEFMQQLIESGGLFGYAKK 159
>gi|365841966|ref|ZP_09383010.1| putative 3-isopropylmalate dehydratase, small subunit
[Flavonifractor plautii ATCC 29863]
gi|373115320|ref|ZP_09529496.1| 3-isopropylmalate dehydratase, small subunit [Lachnospiraceae
bacterium 7_1_58FAA]
gi|364576608|gb|EHM53924.1| putative 3-isopropylmalate dehydratase, small subunit
[Flavonifractor plautii ATCC 29863]
gi|371670612|gb|EHO35691.1| 3-isopropylmalate dehydratase, small subunit [Lachnospiraceae
bacterium 7_1_58FAA]
Length = 161
Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 95/169 (56%), Gaps = 15/169 (8%)
Query: 75 YVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKII 134
Y GDN+DTD IIPA YL + PDE + L S+ + + A + + T II
Sbjct: 4 YKYGDNVDTDVIIPARYL----NAPDE-KSLASHCMEDIDAGFAS-------TVEPGDII 51
Query: 135 IAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEECS 194
+AG NFGCGSSREHAP+A+ A G V+A S+ARIF+RN++ G +P+ A E
Sbjct: 52 VAGANFGCGSSREHAPLAIKACGVKCVIAPSFARIFYRNAINIG--FPILECAEAAEGIQ 109
Query: 195 TGDVVTIEIAESRLINHTTGKEYKLKPI-GDLGPVIDAGGIFAYARKTG 242
GD V+++ + + TTGK Y+ P+ + ++D GG+ + G
Sbjct: 110 AGDTVSVDFGTGVITDETTGKTYQAAPLPAFVQGIVDNGGLLKSLKARG 158
>gi|295106179|emb|CBL03722.1| 3-isopropylmalate dehydratase, small subunit [Gordonibacter
pamelaeae 7-10-1-b]
Length = 165
Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/172 (40%), Positives = 98/172 (56%), Gaps = 15/172 (8%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
F G + G +IDTD IIPA YLT S+P E L + L L ++ R
Sbjct: 3 FKGTAHRYGRDIDTDVIIPARYLTT--SDPAE---LAKHCLEDLDTSFIERV-------Q 50
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
II+A NFGCGSSREHAP+A+ AAG VVA+S+ARIF+RNS+ TG EA
Sbjct: 51 PGDIIVADENFGCGSSREHAPIAIKAAGVDVVVAKSFARIFYRNSINTGLAIMECPEA-- 108
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
+ S GDVV+++ +++ TTG+ ++ +P + +I+AGG+ R+
Sbjct: 109 VDAISQGDVVSVDADAGVIVDETTGQTFQAQPFPPFIKEIIEAGGLINRTRQ 160
>gi|298675218|ref|YP_003726968.1| 3-isopropylmalate dehydratase small subunit [Methanohalobium
evestigatum Z-7303]
gi|298288206|gb|ADI74172.1| 3-isopropylmalate dehydratase, small subunit [Methanohalobium
evestigatum Z-7303]
Length = 164
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/171 (39%), Positives = 99/171 (57%), Gaps = 20/171 (11%)
Query: 71 HGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTK 130
G +V GDNIDTD +IP +YL + + +A+ G+ ++++ K
Sbjct: 3 EGRAWVYGDNIDTDVMIPGKYLRTT-----DMQVFADHAMEGIDPEFSSKV-------QK 50
Query: 131 YKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLC 190
+I+AG NFGCGSSRE AP+AL AG + VVA+S+ARIFFRN++ G P+ EA +
Sbjct: 51 GDVIVAGNNFGCGSSREQAPLALKHAGVACVVAKSFARIFFRNAINVG--LPV-MEADV- 106
Query: 191 EECSTGDVVTIEIAESRL-INHTTGKEYKLKPIGDLGPVIDAGGIFAYARK 240
ECS GD+V I++ + +N+ T K KL L ++ GG+ A+ RK
Sbjct: 107 -ECSEGDIVKIDLKNGSVEVNNKTFKGNKLPDF--LLEILTDGGLVAHRRK 154
>gi|220927586|ref|YP_002504495.1| 3-isopropylmalate dehydratase small subunit [Clostridium
cellulolyticum H10]
gi|259494354|sp|B8I4G1.1|LEUD_CLOCE RecName: Full=3-isopropylmalate dehydratase small subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|219997914|gb|ACL74515.1| 3-isopropylmalate dehydratase, small subunit [Clostridium
cellulolyticum H10]
Length = 163
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/165 (38%), Positives = 96/165 (58%), Gaps = 15/165 (9%)
Query: 78 GDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKIIIAG 137
G+N+DTD IIPA YL S+P E L S+ + L +T R K +++AG
Sbjct: 11 GNNVDTDVIIPARYLN--TSDPAE---LASHCMEDLDEKFTQRV-------QKGDVMVAG 58
Query: 138 GNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEECSTGD 197
NFGCGSSREHAP+++ A+G S V+AE++ARIF+RN+V G P+ + ++ D
Sbjct: 59 KNFGCGSSREHAPISIKASGISCVIAETFARIFYRNAVNIG--LPIIECSEAAKDIKDND 116
Query: 198 VVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARKT 241
V I+ + + N TTGK Y+ +P + + +I A G+ Y + +
Sbjct: 117 QVEIDFDKGLIKNLTTGKTYQGQPFPEFMQEIISADGLIQYIKNS 161
>gi|15678849|ref|NP_275966.1| 3-isopropylmalate dehydratase small subunit [Methanothermobacter
thermautotrophicus str. Delta H]
gi|3122329|sp|O26917.1|LEUD1_METTH RecName: Full=3-isopropylmalate dehydratase small subunit 1;
AltName: Full=Alpha-IPM isomerase 1; Short=IPMI 1;
AltName: Full=Isopropylmalate isomerase 1
gi|2621919|gb|AAB85327.1| 3-isopropylmalate dehydratase, LeuD subunit [Methanothermobacter
thermautotrophicus str. Delta H]
Length = 170
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/172 (37%), Positives = 98/172 (56%), Gaps = 18/172 (10%)
Query: 71 HGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTK 130
G + GDN+DTD IIP YL ++L S+ + G + ++ K
Sbjct: 6 RGRVWRFGDNVDTDMIIPGRYLRTFS-----LDELASHVMEGARPEFASQV-------RK 53
Query: 131 YKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLC 190
II+AG NFGCGSSRE APVAL AG A++AES+ARIF+RN++ G P+ A++
Sbjct: 54 GDIIVAGRNFGCGSSREQAPVALKHAGVVAIIAESFARIFYRNAINIG--LPV-IMAKV- 109
Query: 191 EECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARKT 241
+ GD V+I++ ++ N T G EY++KP D + +++ GG+ + KT
Sbjct: 110 -DADDGDEVSIDLRSGQIRNLTAGSEYRMKPFNDYMLSILEDGGLVNHYLKT 160
>gi|395226734|ref|ZP_10405179.1| 3-isopropylmalate dehydratase, small subunit [Thiovulum sp. ES]
gi|394445006|gb|EJF06008.1| 3-isopropylmalate dehydratase, small subunit [Thiovulum sp. ES]
Length = 166
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/175 (37%), Positives = 99/175 (56%), Gaps = 18/175 (10%)
Query: 68 ATFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENET 127
+ G + GDNIDTD II A YL N + +KL + + ++ +
Sbjct: 2 SKLEGKVWRFGDNIDTDLIIAARYL-----NTSDPKKLAQHVMEDADPQFSQKV------ 50
Query: 128 KTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG-EIYPLDSE 186
++ II+AG NFG GSSREHAP+AL AAG SAV+A S+ARIF+RNS G I+ L+
Sbjct: 51 -SEGDIIVAGANFGSGSSREHAPIALKAAGVSAVIAPSFARIFYRNSFNMGLPIFELEES 109
Query: 187 ARLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
A E S G ++I++ + + ++GK Y+ K I + +++AGG+ Y ++
Sbjct: 110 A----EISEGSQISIDMENGTIKDLSSGKSYQFKAIPPFMQNLLNAGGLMNYGKQ 160
>gi|406981951|gb|EKE03329.1| 3-isopropylmalate dehydratase small subunit [uncultured bacterium]
Length = 166
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 92/170 (54%), Gaps = 15/170 (8%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G +V DN+DTD IIPA YL N ++++L S+ + + +
Sbjct: 7 GRAWVYKDNVDTDVIIPARYL-----NTTDHKELASHCMEDIDQDFVVNV-------KAG 54
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
I++AG NFGCGSSREHAP+A+ A+G S V+A+++ARIFFRN++ G P+ A L +
Sbjct: 55 DIMVAGENFGCGSSREHAPIAIKASGVSVVIAKTFARIFFRNAINIG--LPIMENAELPD 112
Query: 192 ECSTGDVVTIEIAESRLINHTTGKEYKLKPI-GDLGPVIDAGGIFAYARK 240
E D + + + + N T K Y+ P + +I GG+ Y ++
Sbjct: 113 EIDQHDEIEVNLETGEIKNLTKNKTYQASPFPKSIQELISVGGLVNYTKQ 162
>gi|188586767|ref|YP_001918312.1| 3-isopropylmalate dehydratase small subunit [Natranaerobius
thermophilus JW/NM-WN-LF]
gi|179351454|gb|ACB85724.1| 3-isopropylmalate dehydratase, small subunit [Natranaerobius
thermophilus JW/NM-WN-LF]
Length = 185
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 96/166 (57%), Gaps = 16/166 (9%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
F G +V+GDNIDTDQI+P Y P E+L Y L G + D +E
Sbjct: 19 FRGKAFVLGDNIDTDQILPG-YAMSAPK-----EQLRHYVLKG------SSIPDFSERVQ 66
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
+ III G NFGCGSSRE AP+AL AG SA++A+S+ARIF RN++ G P+ +
Sbjct: 67 QGDIIIGGDNFGCGSSREQAPIALKDAGVSAIIAKSFARIFRRNAINIG--LPV-LYGDV 123
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLG-PVIDAGGI 234
EE TGD V ++I + +L N T K ++L+ + + ++AGG+
Sbjct: 124 VEEIETGDEVQLKIYQYKLENITKDKTFQLEELSQVTMETLEAGGL 169
>gi|253826736|ref|ZP_04869621.1| 3-isopropylmalate dehydratase small subunit [Helicobacter
canadensis MIT 98-5491]
gi|313142253|ref|ZP_07804446.1| 3-isopropylmalate dehydratase small subunit [Helicobacter
canadensis MIT 98-5491]
gi|253510142|gb|EES88801.1| 3-isopropylmalate dehydratase small subunit [Helicobacter
canadensis MIT 98-5491]
gi|313131284|gb|EFR48901.1| 3-isopropylmalate dehydratase small subunit [Helicobacter
canadensis MIT 98-5491]
Length = 161
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/175 (41%), Positives = 98/175 (56%), Gaps = 24/175 (13%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
G + GDNIDTD II A YL N + + L S+ + A + +
Sbjct: 1 MQGKAWKFGDNIDTDLIIAARYL-----NTSDEKVLASHLMEDARADFVSLI-------G 48
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG----EIYPLDS 185
K II+AG NFGCGSSREHAPVA+ AAG +AV+A+SYARIF+RN+ TG EI DS
Sbjct: 49 KGDIIVAGENFGCGSSREHAPVAIKAAGIAAVIAKSYARIFYRNAFNTGLPILEIKETDS 108
Query: 186 EARLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYAR 239
+CE GDV+ I++ + N T +Y PI + +++AGG+ YA+
Sbjct: 109 ---ICE----GDVLEIDLQGGVIKNITQNTQYHFTPIPPFMLELLEAGGLIPYAK 156
>gi|414153629|ref|ZP_11409952.1| 3-isopropylmalate dehydratase small subunit [Desulfotomaculum
hydrothermale Lam5 = DSM 18033]
gi|411455027|emb|CCO07856.1| 3-isopropylmalate dehydratase small subunit [Desulfotomaculum
hydrothermale Lam5 = DSM 18033]
Length = 166
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/171 (38%), Positives = 95/171 (55%), Gaps = 15/171 (8%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
G + G+++DTD II A YL S+P E L + + + +R
Sbjct: 3 LQGKVWKFGNDVDTDLIIAARYLN--SSDPAE---LARHCMEDADPQFASRV-------K 50
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
I++AG NFGCGSSREHAP+A+ AAG S VVA+S+ARIF+RN+ G P+ +
Sbjct: 51 PGDILVAGKNFGCGSSREHAPIAIKAAGVSCVVAKSFARIFYRNAFNIG--LPIFECPEI 108
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYAR 239
+E GDV+ ++ A + N T GK Y+ PI D + +I+AGG+ Y +
Sbjct: 109 IDELQEGDVIAVDAATGAITNLTDGKTYQAVPIPDFMRQIIEAGGLINYVK 159
>gi|258405580|ref|YP_003198322.1| 3-isopropylmalate dehydratase small subunit [Desulfohalobium
retbaense DSM 5692]
gi|257797807|gb|ACV68744.1| 3-isopropylmalate dehydratase, small subunit [Desulfohalobium
retbaense DSM 5692]
Length = 167
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/171 (39%), Positives = 93/171 (54%), Gaps = 15/171 (8%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
+ G + VG +IDTD IIPA YL V ++P+E LG + + GL + R
Sbjct: 3 YTGKVHKVGAHIDTDAIIPARYL--VTADPEE---LGVHCMAGLEENWIDRV-------N 50
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
K II+ G NFGCGSSREHAP+A+ AG VVA S+ARIF+RN G PL
Sbjct: 51 KGDIIVGGPNFGCGSSREHAPLAILGAGIPVVVAHSFARIFYRNGFNMG--LPLLEVGDA 108
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYAR 239
E S GD +T+++ + + N TTG P+ + + ++ GG+ Y R
Sbjct: 109 VERISDGDTLTVDVQQGTVTNATTGDVITCPPVPEFMQELLAKGGLIPYVR 159
>gi|261403299|ref|YP_003247523.1| 3-isopropylmalate dehydratase small subunit [Methanocaldococcus
vulcanius M7]
gi|261370292|gb|ACX73041.1| 3-isopropylmalate dehydratase, small subunit [Methanocaldococcus
vulcanius M7]
Length = 164
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 96/171 (56%), Gaps = 15/171 (8%)
Query: 71 HGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTK 130
G + GDN+DTD I+PA YL V + P+E L + + G + + +
Sbjct: 3 RGRVWKFGDNVDTDAILPARYL--VYTKPEE---LAQFVMTGADPEFPKKV-------KR 50
Query: 131 YKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLC 190
II+ G NFGCGSSREHAP+ L AG S V+AES+ARIF+RNS+ G PL +
Sbjct: 51 GDIIVGGKNFGCGSSREHAPLGLKGAGISCVIAESFARIFYRNSINVG--LPLIECKDIT 108
Query: 191 EECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
++ + GD + + + + N TTG+ +K + + + +++AGG+ Y +K
Sbjct: 109 KKVNEGDELEVNLETGEIKNLTTGEVFKGQKLPSFMMEILEAGGLMPYLKK 159
>gi|448459759|ref|ZP_21596809.1| 3-isopropylmalate dehydratase, small subunit [Halorubrum
lipolyticum DSM 21995]
gi|445808211|gb|EMA58285.1| 3-isopropylmalate dehydratase, small subunit [Halorubrum
lipolyticum DSM 21995]
Length = 175
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 99/182 (54%), Gaps = 16/182 (8%)
Query: 59 DSRATKEPTATFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYT 118
D+ A ++ T G + GD+IDTDQIIP+ +L V S+P E LG +A L +
Sbjct: 3 DADAGRDIDTTEPGRAWTFGDDIDTDQIIPSRFL--VSSDPAE---LGEHAFNDLRPEFA 57
Query: 119 TRFIDENETKTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG 178
D + ++ G NFG GSSREHAP++L AG +VA+S+ARIFFRN + G
Sbjct: 58 PNVADGD-------FVVGGHNFGSGSSREHAPISLLGAGIDGIVAQSFARIFFRNGINLG 110
Query: 179 EIYPLDSEARLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAY 237
+ +A + GD +++ + E ++NHT + Y P+ + L ++D GG+ Y
Sbjct: 111 LPVLICPDA---DRIDDGDAISLRLDEGAVVNHTADERYDADPLPEFLQSLVDRGGLEPY 167
Query: 238 AR 239
R
Sbjct: 168 TR 169
>gi|268324972|emb|CBH38560.1| isopropylmalate/citramalate isomerase, small subunit [uncultured
archaeon]
Length = 157
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 98/169 (57%), Gaps = 16/169 (9%)
Query: 74 CYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKI 133
+ G ++DTDQIIPAEYLT +P +KL ++A + + + K +
Sbjct: 3 VWKFGPDVDTDQIIPAEYLTT--GDP---KKLAAHAFAKMRPEFA-------KEARKGDV 50
Query: 134 IIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEEC 193
IIA NFGCGSSREHAP AL G S V+A+S+ARIFFRNS+ G PL EA + ++
Sbjct: 51 IIAAENFGCGSSREHAPRALIGVGISCVIAKSFARIFFRNSINIG--LPL-IEADVFDKI 107
Query: 194 STGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARKT 241
D + I+ + + + T +EY+ KP+ + + ++D+GG+ Y R +
Sbjct: 108 EETDEIAIDFGDGEIRDITKDEEYEFKPLPEFMQKLLDSGGLINYIRNS 156
>gi|15896420|ref|NP_349769.1| 3-isopropylmalate dehydratase small subunit [Clostridium
acetobutylicum ATCC 824]
gi|337738378|ref|YP_004637825.1| 3-isopropylmalate dehydratase small subunit [Clostridium
acetobutylicum DSM 1731]
gi|384459888|ref|YP_005672308.1| 3-isopropylmalate dehydratase small subunit [Clostridium
acetobutylicum EA 2018]
gi|23396668|sp|Q97EE1.1|LEUD_CLOAB RecName: Full=3-isopropylmalate dehydratase small subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|15026240|gb|AAK81109.1|AE007812_5 3-isopropylmalate dehydratase, small subunit [Clostridium
acetobutylicum ATCC 824]
gi|325510577|gb|ADZ22213.1| 3-isopropylmalate dehydratase, small subunit [Clostridium
acetobutylicum EA 2018]
gi|336292675|gb|AEI33809.1| 3-isopropylmalate dehydratase, small subunit [Clostridium
acetobutylicum DSM 1731]
Length = 163
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/149 (42%), Positives = 86/149 (57%), Gaps = 16/149 (10%)
Query: 78 GDNIDTDQIIPAEYL-TLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKIIIA 136
GDNIDTD IIPA YL T VP E+L + + L + + KT I++
Sbjct: 11 GDNIDTDVIIPARYLNTSVP------EELAKHCMEDLDVDFLKKL------KTG-DIVVG 57
Query: 137 GGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEECSTG 196
G NFGCGSSREHAP+ + AAG S V+A+S+ARIF+RNS+ G +P+ + STG
Sbjct: 58 GRNFGCGSSREHAPICIKAAGVSCVIAKSFARIFYRNSINIG--FPILECEEAVNDASTG 115
Query: 197 DVVTIEIAESRLINHTTGKEYKLKPIGDL 225
D + ++ E + N T KEYK +P D
Sbjct: 116 DKLEVDFIEGIIKNVTLNKEYKAQPFPDF 144
>gi|268680137|ref|YP_003304568.1| 3-isopropylmalate dehydratase, small subunit [Sulfurospirillum
deleyianum DSM 6946]
gi|268618168|gb|ACZ12533.1| 3-isopropylmalate dehydratase, small subunit [Sulfurospirillum
deleyianum DSM 6946]
Length = 162
Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/175 (42%), Positives = 101/175 (57%), Gaps = 20/175 (11%)
Query: 68 ATFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENET 127
+T G + GDNIDTD II A YL S+P E L + + + + + E +
Sbjct: 2 STISGKVWCFGDNIDTDLIIAARYLNT--SDPKE---LAKHVMEDADPEFAKK-VGEGD- 54
Query: 128 KTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG-EIYPLDSE 186
II+AG NFGCGSSREHAP+AL AAG SAVVA+S+ARIF+RN+ TG I+ L +
Sbjct: 55 -----IIVAGENFGCGSSREHAPIALKAAGVSAVVAKSFARIFYRNAFNTGLPIFELPN- 108
Query: 187 ARLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
E G+ + I + ES I H + K YK PI + ++DAGG+ YA+K
Sbjct: 109 ---TEAIQEGESIAISM-ESGEITHGS-KTYKFTPIPPFMQELLDAGGLMNYAQK 158
>gi|339445701|ref|YP_004711705.1| 3-isopropylmalate dehydratase small subunit [Eggerthella sp.
YY7918]
gi|338905453|dbj|BAK45304.1| 3-isopropylmalate dehydratase small subunit [Eggerthella sp.
YY7918]
Length = 165
Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/172 (39%), Positives = 98/172 (56%), Gaps = 15/172 (8%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
F G + G +IDTD IIPA YLT S+P E L + L L T+ +
Sbjct: 3 FKGTAHRYGRDIDTDVIIPARYLTT--SDPAE---LAKHCLEDLDTTFVQKV-------Q 50
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
II+A NFGCGSSREHAP+A+ AAG V+A+S+ARIF+RNS+ TG EA
Sbjct: 51 PGDIIVADENFGCGSSREHAPIAIKAAGVDVVIAKSFARIFYRNSINTGLAIMECPEA-- 108
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
+ S GDVV+++ +++ TTG+ ++ +P + +I+AGG+ R+
Sbjct: 109 VDAISAGDVVSVDADAGVIVDETTGQTFQAQPFPPFIREIIEAGGLINRTRE 160
>gi|20094218|ref|NP_614065.1| 3-isopropylmalate dehydratase small subunit [Methanopyrus kandleri
AV19]
gi|23396651|sp|Q8TX94.1|LEUD1_METKA RecName: Full=3-isopropylmalate dehydratase small subunit 1;
AltName: Full=Alpha-IPM isomerase 1; Short=IPMI 1;
AltName: Full=Isopropylmalate isomerase 1
gi|19887246|gb|AAM01995.1| 3-isopropylmalate dehydratase small subunit [Methanopyrus kandleri
AV19]
Length = 170
Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/175 (37%), Positives = 97/175 (55%), Gaps = 15/175 (8%)
Query: 69 TFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETK 128
G +V GD+IDTDQIIP YLT +P+E L + + G + E
Sbjct: 4 VIRGRAWVFGDDIDTDQIIPGRYLTT--QDPEE---LAKHVMEGADPEFP-------EKV 51
Query: 129 TKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEAR 188
+ +I+AG NFGCGSSREHAP+AL AAG + VV S+ARIF+RN++ G PL
Sbjct: 52 REGDVIVAGKNFGCGSSREHAPIALKAAGIACVVTRSFARIFYRNAINLG--LPLVVCPG 109
Query: 189 LCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARKTG 242
+ + G + + + E + N TG+E + KP+ D + +++AGG+ ++ G
Sbjct: 110 VDDAFEDGQGIEVNLREGYVRNLDTGEELEAKPLPDFMMRILEAGGLVELIKREG 164
>gi|73748631|ref|YP_307870.1| 3-isopropylmalate dehydratase small subunit [Dehalococcoides sp.
CBDB1]
gi|289432656|ref|YP_003462529.1| 3-isopropylmalate dehydratase small subunit [Dehalococcoides sp.
GT]
gi|452203616|ref|YP_007483749.1| 3-isopropylmalate dehydratase small subunit [Dehalococcoides
mccartyi DCMB5]
gi|73660347|emb|CAI82954.1| 3-isopropylmalate dehydratase, small subunit [Dehalococcoides sp.
CBDB1]
gi|288946376|gb|ADC74073.1| 3-isopropylmalate dehydratase, small subunit [Dehalococcoides sp.
GT]
gi|452110675|gb|AGG06407.1| 3-isopropylmalate dehydratase small subunit [Dehalococcoides
mccartyi DCMB5]
Length = 166
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/172 (36%), Positives = 97/172 (56%), Gaps = 15/172 (8%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
G + G+N+DTD IIPA YL N E + L + + + + T+
Sbjct: 2 LKGFVHKYGENVDTDAIIPARYL-----NVSEPKALAEHCMEDIDLDFVTKV-------K 49
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
I+A NFGCGSSREHAP+++ A+G SAV+A S+ARIFFRN++ G PL A
Sbjct: 50 PGDFIVATTNFGCGSSREHAPISIKASGVSAVIAASFARIFFRNAINIG--LPLLESAEA 107
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
E+ ++GD + I++ + + TTG+++ KP + + +I AGG+ Y R+
Sbjct: 108 AEKINSGDELEIDLETGIIKDLTTGEKFSAKPYPEFMSRLIKAGGLIEYTRE 159
>gi|429737130|ref|ZP_19271002.1| putative 3-isopropylmalate dehydratase, small subunit [Selenomonas
sp. oral taxon 138 str. F0429]
gi|429153274|gb|EKX96061.1| putative 3-isopropylmalate dehydratase, small subunit [Selenomonas
sp. oral taxon 138 str. F0429]
Length = 166
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 95/174 (54%), Gaps = 15/174 (8%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
F G + GDNIDTD IIPA YL N E + L ++ + + T+ + +
Sbjct: 2 FEGKVWRYGDNIDTDVIIPARYL-----NTFEPKALAAHCMEDIDTTFAKEVVAGD---- 52
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
I++ G NFGCGSSREHAP+A+ A+G V+A S+ARIF+RN + G PL
Sbjct: 53 ---IMVGGKNFGCGSSREHAPIAIAASGVPVVIAASFARIFYRNGINIG--LPLLEIGDA 107
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPI-GDLGPVIDAGGIFAYARKTG 242
E+ S GD + ++ A + N +TG ++ P+ G + + AGG+ Y R+ G
Sbjct: 108 VEKISAGDRLRVDTATGAIENLSTGDTFRAHPLPGFVQDIARAGGLLNYIRENG 161
>gi|257790352|ref|YP_003180958.1| 3-isopropylmalate dehydratase small subunit [Eggerthella lenta DSM
2243]
gi|317489799|ref|ZP_07948298.1| 3-isopropylmalate dehydratase [Eggerthella sp. 1_3_56FAA]
gi|325830172|ref|ZP_08163629.1| 3-isopropylmalate dehydratase small subunit [Eggerthella sp. HGA1]
gi|257474249|gb|ACV54569.1| 3-isopropylmalate dehydratase, small subunit [Eggerthella lenta DSM
2243]
gi|316911145|gb|EFV32755.1| 3-isopropylmalate dehydratase [Eggerthella sp. 1_3_56FAA]
gi|325487639|gb|EGC90077.1| 3-isopropylmalate dehydratase small subunit [Eggerthella sp. HGA1]
Length = 165
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/167 (40%), Positives = 96/167 (57%), Gaps = 15/167 (8%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
F G + G +IDTD IIPA YLT S+P E L + L L ++ R
Sbjct: 3 FKGTAHRYGRDIDTDVIIPARYLTT--SDPAE---LAKHCLEDLDTSFVERV-------Q 50
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
II+A NFGCGSSREHAP+A+ AAG V+A+S+ARIF+RNS+ TG EA
Sbjct: 51 PGDIIVADENFGCGSSREHAPIAIKAAGVDVVIAKSFARIFYRNSINTGLAIMECPEA-- 108
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIF 235
+ S GDVV+++ +++ TTG+ Y+ +P + +I+AGG+
Sbjct: 109 VDAISQGDVVSVDADTGVIVDETTGQTYQAQPFPPFIREIIEAGGLI 155
>gi|118576668|ref|YP_876411.1| 3-isopropylmalate dehydratase small subunit [Cenarchaeum symbiosum
A]
gi|118195189|gb|ABK78107.1| 3-isopropylmalate dehydratase small subunit [Cenarchaeum symbiosum
A]
Length = 161
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/160 (40%), Positives = 91/160 (56%), Gaps = 13/160 (8%)
Query: 79 DNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKIIIAGG 138
DNIDTD IIP YL + +Y +L ++A+ GL + R + E + I+AG
Sbjct: 11 DNIDTDVIIPGMYLKI-----HDYAELATHAMEGLDPGFHGR-VKEGD------FILAGS 58
Query: 139 NFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEECSTGDV 198
NFGCGSSREHAP+AL +G AV+A S+ARIF+RN V + P++ + E S G
Sbjct: 59 NFGCGSSREHAPIALSHSGIKAVIAVSFARIFYRNCVDGAFLLPIEVDRSTYERISDGSQ 118
Query: 199 VTIEIAESRLINHTTGKEYKLKPI-GDLGPVIDAGGIFAY 237
+ I+ + + T G Y +KP G + +I AGG+F Y
Sbjct: 119 LDIDADAGTITDLTGGGTYPMKPFPGIIAEIIKAGGLFKY 158
>gi|21227592|ref|NP_633514.1| 3-isopropylmalate dehydratase small subunit [Methanosarcina mazei
Go1]
gi|23396643|sp|Q8PWT6.1|LEUD2_METMA RecName: Full=3-isopropylmalate dehydratase small subunit 2;
AltName: Full=Alpha-IPM isomerase 2; Short=IPMI 2;
AltName: Full=Isopropylmalate isomerase 2
gi|20905977|gb|AAM31186.1| 3-isopropylmalate dehydratase [Methanosarcina mazei Go1]
Length = 162
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/172 (37%), Positives = 98/172 (56%), Gaps = 16/172 (9%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
G + GD++DTD +IP YL + P E L Y G+ + + + EN+
Sbjct: 1 MKGRAWKFGDDVDTDAVIPGRYLIF--NTPGE---LAKYTFEGVRPDFA-KNVHEND--- 51
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
I++AG NFGCGSSREHAP+AL + S V+A+S+ARIFFRN++ G P+ E
Sbjct: 52 ---IVVAGSNFGCGSSREHAPLALKGSKVSCVIAKSFARIFFRNAINIG--VPV-LECPD 105
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
++ GD + ++I+ + N T G+ Y+ P+ D + ++D GG+ YARK
Sbjct: 106 TDKIDDGDELEVDISTGVIQNRTKGETYQATPLPDFVREIVDEGGLIEYARK 157
>gi|84490266|ref|YP_448498.1| LeuD1 [Methanosphaera stadtmanae DSM 3091]
gi|84373585|gb|ABC57855.1| LeuD1 [Methanosphaera stadtmanae DSM 3091]
Length = 167
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/171 (39%), Positives = 94/171 (54%), Gaps = 15/171 (8%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G +GD+IDTD I+P YLTL S P E LG + + G Y + I E +
Sbjct: 7 GRVLKLGDDIDTDSILPGRYLTL--SKP---EDLGKHVMEGYDLHYKDK-IQEGD----- 55
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
+I+AG NFGCGSSREHAP+AL A+G AVVA+S+ARIF+RN++ G L +
Sbjct: 56 -VIVAGSNFGCGSSREHAPIALKASGIKAVVAKSFARIFYRNAINIG--LTLVEAHEGPD 112
Query: 192 ECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARKT 241
E D V I++ L N T +EY + + + +++ G+ Y KT
Sbjct: 113 EIEEEDTVKIDLENGTLTNKTKNQEYATTSLPEFMFEILENDGLIKYLNKT 163
>gi|401563812|ref|ZP_10804747.1| putative 3-isopropylmalate dehydratase, small subunit [Selenomonas
sp. FOBRC6]
gi|400189432|gb|EJO23526.1| putative 3-isopropylmalate dehydratase, small subunit [Selenomonas
sp. FOBRC6]
Length = 166
Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 95/174 (54%), Gaps = 15/174 (8%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
F G + GDNIDTD IIPA YL N E + L ++ + + T+ + +
Sbjct: 2 FEGKVWRYGDNIDTDVIIPARYL-----NTFEPKALAAHCMEDIDTTFAKEVVAGD---- 52
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
I++ G NFGCGSSREHAP+A+ A+G V+A S+ARIF+RN + G PL
Sbjct: 53 ---IMVGGKNFGCGSSREHAPIAIAASGVPVVIAASFARIFYRNGINIG--LPLLEIGDA 107
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPI-GDLGPVIDAGGIFAYARKTG 242
E+ S GD + ++ A + N +TG ++ P+ G + + AGG+ Y R+ G
Sbjct: 108 VEKISAGDHLRVDTATGAIENLSTGDTFRAHPLPGFVQDIARAGGLLNYIRENG 161
>gi|363897354|ref|ZP_09323893.1| hypothetical protein HMPREF9624_00455 [Oribacterium sp. ACB7]
gi|361958851|gb|EHL12148.1| hypothetical protein HMPREF9624_00455 [Oribacterium sp. ACB7]
Length = 166
Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 95/176 (53%), Gaps = 23/176 (13%)
Query: 71 HGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTK 130
G C GDN+DTD IIPA YL + + L AT+ ID++ K
Sbjct: 5 RGNCIKYGDNVDTDVIIPARYLAIQDRS--------------LLATHAMEDIDKDFHKKM 50
Query: 131 YK--IIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEAR 188
K I+IAG NFGCGSSREHAP L +G S ++AES+ARIFFRN++ G +A
Sbjct: 51 KKGDILIAGKNFGCGSSREHAPQVLKDSGVSCIIAESFARIFFRNAINIGLAIVESPDA- 109
Query: 189 LCEECSTGDVVTIEIAESRLINHTTGKEYKLK---PIGDLGPVIDAGGIFAYARKT 241
+E GD V ++ + R+ + ++GK Y + P L +ID GG+ A+ ++
Sbjct: 110 -AKEIKEGDEVEVDFSAGRIRDISSGKSYDMAVFPPF--LQDMIDKGGLIAFVNES 162
>gi|57234433|ref|YP_181554.1| 3-isopropylmalate dehydratase small subunit [Dehalococcoides
ethenogenes 195]
gi|57224881|gb|AAW39938.1| 3-isopropylmalate dehydratase, small subunit [Dehalococcoides
ethenogenes 195]
Length = 166
Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/172 (36%), Positives = 95/172 (55%), Gaps = 15/172 (8%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
G + G+N+DTD IIPA YL N E + L + + + + +
Sbjct: 2 LKGFVHKYGENVDTDAIIPARYL-----NVSEPKALAEHCMEDIDLDFVKKV-------K 49
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
I+A NFGCGSSREHAP+++ A+G SAV+A S+ARIFFRN++ G PL A
Sbjct: 50 PGDFIVATTNFGCGSSREHAPISIKASGVSAVIAASFARIFFRNAINIG--LPLLESAEA 107
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
E+ ++GD + I++ + + TTGK + KP + + +I AGG+ Y R+
Sbjct: 108 AEKINSGDELEIDLESGVIKDLTTGKSFAAKPYPEFMSRLIKAGGLIEYTRE 159
>gi|375086978|ref|ZP_09733369.1| 3-isopropylmalate dehydratase, small subunit [Megamonas funiformis
YIT 11815]
gi|291532354|emb|CBL05467.1| 3-isopropylmalate dehydratase, small subunit [Megamonas hypermegale
ART12/1]
gi|374563477|gb|EHR34791.1| 3-isopropylmalate dehydratase, small subunit [Megamonas funiformis
YIT 11815]
Length = 164
Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 97/174 (55%), Gaps = 15/174 (8%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
G + GDNIDTD IIPA YL N + ++L S+ ++ + T+ ++ +
Sbjct: 5 LEGKVWRYGDNIDTDVIIPARYL-----NSFDPKELASHCMVDIDETFAQNVVEGD---- 55
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
I++ G NFGCGSSREHAP+A+ A+G V+A S+ARIF+RN++ TG PL
Sbjct: 56 ---IMVGGKNFGCGSSREHAPIAIKASGVPVVIASSFARIFYRNAINTG--LPLLEIGDD 110
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPI-GDLGPVIDAGGIFAYARKTG 242
E+ D + ++++ + N TTG + P+ G + + AGG+ Y ++ G
Sbjct: 111 VEKIHANDKLRVDLSTGTIENLTTGDTFHAVPLPGFIQDIAKAGGLINYIKQKG 164
>gi|222479531|ref|YP_002565768.1| 3-isopropylmalate dehydratase, small subunit [Halorubrum
lacusprofundi ATCC 49239]
gi|222452433|gb|ACM56698.1| 3-isopropylmalate dehydratase, small subunit [Halorubrum
lacusprofundi ATCC 49239]
Length = 175
Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/182 (36%), Positives = 99/182 (54%), Gaps = 16/182 (8%)
Query: 59 DSRATKEPTATFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYT 118
D+ A ++ T G + GD+IDTDQIIP+ +L V S+P E LG +A L +
Sbjct: 3 DADAGRDIDTTEPGRAWTFGDDIDTDQIIPSRFL--VSSDPAE---LGEHAFNDLRPEFA 57
Query: 119 TRFIDENETKTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG 178
D + ++ G NFG GSSREHAP++L AG +VA+S+ARIFFRN + G
Sbjct: 58 PNVADGD-------FVVGGHNFGSGSSREHAPLSLLGAGIDGIVAQSFARIFFRNGINLG 110
Query: 179 EIYPLDSEARLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAY 237
+ +A + GD +++ + E +INHT + Y P+ + L ++D GG+ Y
Sbjct: 111 LPVLICPDA---DRIDDGDEISLRLDEGAVINHTADERYDADPLPEFLQTLVDRGGLEPY 167
Query: 238 AR 239
R
Sbjct: 168 TR 169
>gi|337288825|ref|YP_004628297.1| 3-isopropylmalate dehydratase small subunit [Thermodesulfobacterium
sp. OPB45]
gi|334902563|gb|AEH23369.1| 3-isopropylmalate dehydratase small subunit [Thermodesulfobacterium
geofontis OPF15]
Length = 165
Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/170 (39%), Positives = 94/170 (55%), Gaps = 15/170 (8%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + GDNIDTD IIPA YL N + E+L + + + + K
Sbjct: 6 GKAWKFGDNIDTDVIIPARYL-----NTTDPEELAKHCMEDADPEFPKKV-------NKG 53
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
II+AG NFGCGSSREHAP+A+ A G + V+AES+ARIF+RN+ TG + EA +
Sbjct: 54 DIIVAGKNFGCGSSREHAPIAIKACGIACVIAESFARIFYRNAFNTGLLILECPEA--VK 111
Query: 192 ECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
E TGD + I E ++IN T K + KP+ + ++D GG+ + K
Sbjct: 112 EIDTGDELEIYPEEGKIINLTKNKVFFTKPLPPFMKEILDDGGLIPHIMK 161
>gi|335046532|ref|ZP_08539555.1| 3-isopropylmalate dehydratase small subunit [Oribacterium sp. oral
taxon 108 str. F0425]
gi|333760318|gb|EGL37875.1| 3-isopropylmalate dehydratase small subunit [Oribacterium sp. oral
taxon 108 str. F0425]
Length = 168
Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 95/176 (53%), Gaps = 23/176 (13%)
Query: 71 HGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTK 130
G C GDN+DTD IIPA YL + + L AT+ ID++ K
Sbjct: 5 RGNCIKYGDNVDTDVIIPARYLAIQDRS--------------LLATHAMEDIDKDFHKKM 50
Query: 131 YK--IIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEAR 188
K I+IAG NFGCGSSREHAP L +G S ++AES+ARIFFRN++ G +A
Sbjct: 51 KKGDILIAGKNFGCGSSREHAPQVLKDSGVSCIIAESFARIFFRNAINIGLAIVESPDA- 109
Query: 189 LCEECSTGDVVTIEIAESRLINHTTGKEYKLK---PIGDLGPVIDAGGIFAYARKT 241
+E GD V ++ + R+ + ++GK Y + P L +ID GG+ A+ ++
Sbjct: 110 -AKEIKEGDEVEVDFSAGRIRDISSGKSYDMAVFPPF--LQDMIDKGGLIAFVNES 162
>gi|323703251|ref|ZP_08114903.1| 3-isopropylmalate dehydratase, small subunit [Desulfotomaculum
nigrificans DSM 574]
gi|333922510|ref|YP_004496090.1| 3-isopropylmalate dehydratase small subunit [Desulfotomaculum
carboxydivorans CO-1-SRB]
gi|323531807|gb|EGB21694.1| 3-isopropylmalate dehydratase, small subunit [Desulfotomaculum
nigrificans DSM 574]
gi|333748071|gb|AEF93178.1| 3-isopropylmalate dehydratase small subunit [Desulfotomaculum
carboxydivorans CO-1-SRB]
Length = 166
Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/171 (38%), Positives = 95/171 (55%), Gaps = 15/171 (8%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
G + G+++DTD II A YL S+P E L + + +
Sbjct: 3 LQGKVWKFGNDVDTDLIIAARYLN--SSDPAE---LARHCMEDADPHFALNV-------K 50
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
I++AG NFGCGSSREHAP+A+ AAG S VVA+S+ARIF+RN+ G P+ L
Sbjct: 51 PGDILVAGKNFGCGSSREHAPIAIKAAGISCVVAKSFARIFYRNAFNIG--LPIFECPEL 108
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYAR 239
+E + GD ++++ ++N TTGKEY+ PI D + +I AGG+ Y +
Sbjct: 109 IDELNEGDTISVDANTGTIVNLTTGKEYQAAPIPDFMRQIIGAGGLINYVK 159
>gi|448464174|ref|ZP_21598397.1| 3-isopropylmalate dehydratase, small subunit [Halorubrum kocurii
JCM 14978]
gi|445815961|gb|EMA65878.1| 3-isopropylmalate dehydratase, small subunit [Halorubrum kocurii
JCM 14978]
Length = 175
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 99/182 (54%), Gaps = 16/182 (8%)
Query: 59 DSRATKEPTATFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYT 118
D+ A ++ T G + GD+IDTDQIIP+ +L V S+P E LG +A L +
Sbjct: 3 DADAGRDIDTTEPGRAWTFGDDIDTDQIIPSRFL--VSSDPAE---LGEHAFNDLRPEFA 57
Query: 119 TRFIDENETKTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG 178
D + ++ G NFG GSSREHAP++L AG +VA+S+ARIFFRN + G
Sbjct: 58 PNVADGD-------FVVGGHNFGSGSSREHAPISLLGAGIDGIVAQSFARIFFRNGINLG 110
Query: 179 EIYPLDSEARLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAY 237
+ +A + GD +++ + E ++NHT + Y P+ + L ++D GG+ Y
Sbjct: 111 LPVLICPDA---DRIDDGDEISLRLDEGAVVNHTADERYDADPLPEFLQNLVDRGGLEPY 167
Query: 238 AR 239
R
Sbjct: 168 TR 169
>gi|422343386|ref|ZP_16424314.1| hypothetical protein HMPREF9432_00374 [Selenomonas noxia F0398]
gi|355378693|gb|EHG25873.1| hypothetical protein HMPREF9432_00374 [Selenomonas noxia F0398]
Length = 167
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/174 (37%), Positives = 93/174 (53%), Gaps = 15/174 (8%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
F G + GDNIDTD IIPA YL N E + L + + + T+ + +
Sbjct: 2 FEGKVWRYGDNIDTDVIIPARYL-----NTFEPKALAEHCMEDIDTTFAKEVVAGD---- 52
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
I++ G NFGCGSSREHAP+A+ A+G V+A S+ARIF+RN + G PL
Sbjct: 53 ---IMVGGRNFGCGSSREHAPIAIAASGVPVVIAASFARIFYRNGINIG--LPLLEIGDD 107
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPI-GDLGPVIDAGGIFAYARKTG 242
E+ S GD + I+ + N TTG ++ P+ G + + AGG+ Y R+ G
Sbjct: 108 VEKISAGDRLRIDTVTGAIENLTTGDTFRAHPLPGFVQEIAQAGGLLNYIRENG 161
>gi|312792723|ref|YP_004025646.1| 3-isopropylmalate dehydratase, small subunit [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|344997085|ref|YP_004799428.1| 3-isopropylmalate dehydratase small subunit [Caldicellulosiruptor
lactoaceticus 6A]
gi|312179863|gb|ADQ40033.1| 3-isopropylmalate dehydratase, small subunit [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|343965304|gb|AEM74451.1| 3-isopropylmalate dehydratase small subunit [Caldicellulosiruptor
lactoaceticus 6A]
Length = 166
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 64/171 (37%), Positives = 93/171 (54%), Gaps = 15/171 (8%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
F G + DNIDTD IIPA YL S+P E L + L L + +
Sbjct: 3 FKGKAHKYYDNIDTDVIIPARYLN--TSDPAE---LAKHCLEDLDKEFVNKV-------Q 50
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
K I++AG NFGCGSSREHAP+A+ A G S V+A+S+ARIF+RN++ G P+
Sbjct: 51 KGDILVAGKNFGCGSSREHAPIAIKACGVSCVIAKSFARIFYRNAINIG--LPIVECEEA 108
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYAR 239
+ GD V +++ + N T KE+K KP + + ++ AGG+ + +
Sbjct: 109 VDGIEAGDEVEVDLVTGSIKNLTKNKEFKAKPFPEFMQNIMKAGGLIEFVK 159
>gi|256829520|ref|YP_003158248.1| 3-isopropylmalate dehydratase small subunit [Desulfomicrobium
baculatum DSM 4028]
gi|256578696|gb|ACU89832.1| 3-isopropylmalate dehydratase, small subunit [Desulfomicrobium
baculatum DSM 4028]
Length = 164
Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/173 (38%), Positives = 92/173 (53%), Gaps = 15/173 (8%)
Query: 69 TFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETK 128
TF G +VVGDNIDTD IIPA +L + +LG GL + R
Sbjct: 2 TFKGKTHVVGDNIDTDAIIPARFLVTADT-----AELGKNCFEGLEPGWVKRV------- 49
Query: 129 TKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEAR 188
TK I++AG NFGCGSSREHAP+A+ AG V+A SYARIF+RNS G + +
Sbjct: 50 TKGDILVAGDNFGCGSSREHAPLAILGAGIPVVLARSYARIFYRNSFNMGLLLLELGDD- 108
Query: 189 LCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
E G+ + I++A + N TTG+ P+ + ++ GG+ Y ++
Sbjct: 109 -IERIKEGNELEIDVAAGTIKNLTTGETIGFIPVAPFMMEMLSGGGLVEYVKR 160
>gi|154498018|ref|ZP_02036396.1| hypothetical protein BACCAP_01998 [Bacteroides capillosus ATCC
29799]
gi|150273008|gb|EDN00165.1| 3-isopropylmalate dehydratase small subunit [Pseudoflavonifractor
capillosus ATCC 29799]
Length = 161
Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/170 (36%), Positives = 97/170 (57%), Gaps = 15/170 (8%)
Query: 75 YVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKII 134
Y GDN+DTD IIPA +L +NPD + L S+ + + A + + T + II
Sbjct: 4 YKYGDNVDTDVIIPARHL----NNPDP-KALASHCMEDIDADFAS-------TVEEGDII 51
Query: 135 IAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEECS 194
+AG NFGCGSSREHAP+++ A G V+A+S+ARIF+RNS+ G +P+ A +
Sbjct: 52 VAGANFGCGSSREHAPLSIKACGVKCVIAKSFARIFYRNSINIG--FPIMECAEAADAIQ 109
Query: 195 TGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARKTGM 243
GD VT++ + + T GK ++ P + + +I +GG+ + G+
Sbjct: 110 PGDKVTVDFQSGVITDETQGKTWQAAPFPEFVNGIIQSGGLLNSLKARGV 159
>gi|302872496|ref|YP_003841132.1| 3-isopropylmalate dehydratase small subunit [Caldicellulosiruptor
obsidiansis OB47]
gi|302575355|gb|ADL43146.1| 3-isopropylmalate dehydratase, small subunit [Caldicellulosiruptor
obsidiansis OB47]
Length = 166
Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/175 (38%), Positives = 95/175 (54%), Gaps = 23/175 (13%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
F G + DNIDTD IIPA YL S+P E L + L L + +
Sbjct: 3 FKGKAHKYYDNIDTDVIIPARYLN--TSDPAE---LAKHCLEDLDKEFVNKV-------Q 50
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
K I++AG NFGCGSSREHAP+A+ A G S V+A+S+ARIF+RN++ G P+
Sbjct: 51 KGDILVAGKNFGCGSSREHAPIAIKACGVSCVIAKSFARIFYRNAINIG--LPIVE---- 104
Query: 190 CEEC----STGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYAR 239
CEE GD V I++ + N T KE+K KP + + ++ AGG+ + +
Sbjct: 105 CEEAVNGIEAGDEVEIDLVNGVIKNITKNKEFKAKPFPEFMQNIMKAGGLIEFVK 159
>gi|150399886|ref|YP_001323653.1| 3-isopropylmalate dehydratase, small subunit [Methanococcus
vannielii SB]
gi|150012589|gb|ABR55041.1| 3-isopropylmalate dehydratase, small subunit [Methanococcus
vannielii SB]
Length = 167
Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/173 (35%), Positives = 95/173 (54%), Gaps = 15/173 (8%)
Query: 69 TFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETK 128
T G +V GDNIDTD I+PA YL E+L YA+ G + + + +
Sbjct: 4 TVEGKAWVFGDNIDTDAILPARYLIYTTE-----EQLAKYAMTGTDPEFPEKALFGD--- 55
Query: 129 TKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEAR 188
II+ G NFGCGSSREHAP+ L G S V+AES+ARIF+RNS+ G +PL
Sbjct: 56 ----IIVGGKNFGCGSSREHAPMGLKGLGISLVIAESFARIFYRNSINIG--FPLLECKD 109
Query: 189 LCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
+ + GD++ +++ + + N TT E + + D + +++ GG+ + +K
Sbjct: 110 ISKYVKEGDILRVDLDKGLIKNVTTNVELTGQNLPDFMMEILNNGGLMPHLKK 162
>gi|302338126|ref|YP_003803332.1| 3-isopropylmalate dehydratase, small subunit [Spirochaeta
smaragdinae DSM 11293]
gi|301635311|gb|ADK80738.1| 3-isopropylmalate dehydratase, small subunit [Spirochaeta
smaragdinae DSM 11293]
Length = 172
Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 70/180 (38%), Positives = 97/180 (53%), Gaps = 15/180 (8%)
Query: 65 EPTATFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDE 124
+ T G C+V GDN++TD+IIPA YL+ S+P E L Y + + + R
Sbjct: 3 DTTMKRKGRCFVFGDNVNTDEIIPARYLS--TSDPAE---LALYCMEDARSGFGRR---- 53
Query: 125 NETKTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLD 184
I+IAG NFGCGSSREHAP+++ A+G V+A+S+ARIF RNS G P+
Sbjct: 54 --DDLAGSIMIAGENFGCGSSREHAPISIKASGIGCVIAKSFARIFLRNSFNIG--LPI- 108
Query: 185 SEARLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARKTGM 243
E ++ GD V I+ + N T KE+ P + L VID GG +YA+ M
Sbjct: 109 IELPEADQFGEGDEVEIDFDRGLVRNLTKNKEFTFNPYPEFLKKVIDYGGWLSYAKAELM 168
>gi|289192137|ref|YP_003458078.1| 3-isopropylmalate dehydratase, small subunit [Methanocaldococcus
sp. FS406-22]
gi|288938587|gb|ADC69342.1| 3-isopropylmalate dehydratase, small subunit [Methanocaldococcus
sp. FS406-22]
Length = 166
Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/175 (35%), Positives = 97/175 (55%), Gaps = 15/175 (8%)
Query: 67 TATFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENE 126
+ G + GDN+DTD I+PA YL V + P+E L + + G + + +
Sbjct: 2 QSVIKGRVWKFGDNVDTDAILPARYL--VYTKPEE---LAQFVMTGADPDFPKKVKPGD- 55
Query: 127 TKTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSE 186
II+ G NFGCGSSREHAP+ L AG S V+AES+ARIF+RN++ G PL
Sbjct: 56 ------IIVGGKNFGCGSSREHAPLGLKGAGISCVIAESFARIFYRNAINVG--LPLIEC 107
Query: 187 ARLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
+ E+ + GD + + + + N TTG+ K + + + + +++AGG+ Y +K
Sbjct: 108 KGISEKVNEGDELEVNLETGEIKNLTTGEVLKGQKLPEFMMEILEAGGLMPYLKK 162
>gi|300854093|ref|YP_003779077.1| 3-isopropylmalate dehydratase small subunit [Clostridium
ljungdahlii DSM 13528]
gi|300434208|gb|ADK13975.1| 3-isopropylmalate dehydratase small subunit [Clostridium
ljungdahlii DSM 13528]
Length = 164
Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/165 (37%), Positives = 96/165 (58%), Gaps = 17/165 (10%)
Query: 78 GDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKIIIAG 137
GDN+DTD IIPA YL N ++++L S+ + + ++ + +K I+IAG
Sbjct: 10 GDNVDTDVIIPARYL-----NTSDHKELASHCMEDIDKDFSKKI-------SKGDIMIAG 57
Query: 138 GNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG-EIYPLDSEARLCEECSTG 196
NFGCGSSREHAP+A+ A+G S ++AE++ARIFFRNS+ G I + AR +E
Sbjct: 58 KNFGCGSSREHAPIAIKASGISCIIAETFARIFFRNSINIGLPIMECEEAARDIDE---K 114
Query: 197 DVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
D V+++ + N T K YK P + + +I + G+ Y ++
Sbjct: 115 DEVSVDTVSGVITNITKNKTYKAVPFPEFMQKIIKSEGLINYIKE 159
>gi|89894116|ref|YP_517603.1| hypothetical protein DSY1370 [Desulfitobacterium hafniense Y51]
gi|219668515|ref|YP_002458950.1| 3-isopropylmalate dehydratase small subunit [Desulfitobacterium
hafniense DCB-2]
gi|423076793|ref|ZP_17065501.1| 3-isopropylmalate dehydratase, small subunit [Desulfitobacterium
hafniense DP7]
gi|89333564|dbj|BAE83159.1| hypothetical protein [Desulfitobacterium hafniense Y51]
gi|219538775|gb|ACL20514.1| 3-isopropylmalate dehydratase, small subunit [Desulfitobacterium
hafniense DCB-2]
gi|361852169|gb|EHL04439.1| 3-isopropylmalate dehydratase, small subunit [Desulfitobacterium
hafniense DP7]
Length = 162
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 64/166 (38%), Positives = 94/166 (56%), Gaps = 15/166 (9%)
Query: 75 YVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKII 134
+ GD+IDTD IIPA YL N + E L ++ + A + E K+ +I
Sbjct: 5 WKFGDDIDTDVIIPARYL-----NQNTPEHLAAHCMEDADANFAK------EVKSG-DVI 52
Query: 135 IAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEECS 194
I G NFGCGSSREHAPVA+ AAG AV+A+SYARIF+RNS+ G P+ +
Sbjct: 53 IGGKNFGCGSSREHAPVAIKAAGVKAVIADSYARIFYRNSLNIG--MPILECPEAVQGIE 110
Query: 195 TGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYAR 239
GD V++++ +++N T E++ +P + +I AGG+ Y +
Sbjct: 111 AGDEVSVDLETGKIVNLTRNTEFEARPFPPFMQDLIKAGGLIPYVK 156
>gi|363899325|ref|ZP_09325835.1| hypothetical protein HMPREF9625_00495 [Oribacterium sp. ACB1]
gi|395209493|ref|ZP_10398587.1| putative 3-isopropylmalate dehydratase, small subunit [Oribacterium
sp. ACB8]
gi|361959162|gb|EHL12458.1| hypothetical protein HMPREF9625_00495 [Oribacterium sp. ACB1]
gi|394705124|gb|EJF12653.1| putative 3-isopropylmalate dehydratase, small subunit [Oribacterium
sp. ACB8]
Length = 166
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 67/172 (38%), Positives = 93/172 (54%), Gaps = 23/172 (13%)
Query: 71 HGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTK 130
G C GDN+DTD IIPA YL + + L AT+ ID++ K
Sbjct: 5 RGNCIKYGDNVDTDVIIPARYLAIQDRS--------------LLATHAMEDIDKDFHKKM 50
Query: 131 YK--IIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEAR 188
K I+IAG NFGCGSSREHAP L +G S ++AES+ARIFFRN++ G +A
Sbjct: 51 KKGDILIAGKNFGCGSSREHAPQVLKDSGVSCIIAESFARIFFRNAINIGLAIVESPDA- 109
Query: 189 LCEECSTGDVVTIEIAESRLINHTTGKEYKLK---PIGDLGPVIDAGGIFAY 237
+E GD V ++ + R+ + ++GK Y + P L +ID GG+ A+
Sbjct: 110 -AKEIKEGDEVEVDFSAGRIRDISSGKSYDMAVFPPF--LQDMIDKGGLIAF 158
>gi|256810014|ref|YP_003127383.1| 3-isopropylmalate dehydratase small subunit [Methanocaldococcus
fervens AG86]
gi|256793214|gb|ACV23883.1| 3-isopropylmalate dehydratase, small subunit [Methanocaldococcus
fervens AG86]
Length = 168
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 96/174 (55%), Gaps = 15/174 (8%)
Query: 68 ATFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENET 127
+ G + GDNIDTD I+PA YL V + P+E L + + G + + +
Sbjct: 3 SVIKGRVWKFGDNIDTDAILPARYL--VYTKPEE---LAQFVMTGADPEFPKKVKPGD-- 55
Query: 128 KTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEA 187
II+ G NFGCGSSREHAP+ L AG S V+AES+ARIF+RN++ G PL
Sbjct: 56 -----IIVGGKNFGCGSSREHAPLGLKGAGISCVIAESFARIFYRNAINVG--LPLIECK 108
Query: 188 RLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
+ E+ + GD + + + + N TTG+ K + + + +++AGG+ Y +K
Sbjct: 109 GISEKVNEGDELEVNLETGEIKNLTTGEVLKGNKLPEFMMEILEAGGLMPYLKK 162
>gi|146296354|ref|YP_001180125.1| 3-isopropylmalate dehydratase small subunit [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|172046022|sp|A4XJ49.1|LEUD_CALS8 RecName: Full=3-isopropylmalate dehydratase small subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|145409930|gb|ABP66934.1| 3-isopropylmalate dehydratase, small subunit [Caldicellulosiruptor
saccharolyticus DSM 8903]
Length = 173
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 64/171 (37%), Positives = 94/171 (54%), Gaps = 15/171 (8%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
F G + DNIDTD IIPA YL S+P E L + L L + +
Sbjct: 3 FKGKAHKYYDNIDTDVIIPARYLN--TSDPAE---LAKHCLEDLDKEFVNKV-------K 50
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
K I++AG NFGCGSSREHAP+A+ A G S V+A+S+ARIF+RN++ G P+
Sbjct: 51 KGDILVAGRNFGCGSSREHAPIAIKACGVSCVIAKSFARIFYRNAINIG--LPIVECEEA 108
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYAR 239
+ GD V +++ + + N T KE+K KP + + ++ AGG+ + +
Sbjct: 109 VDGIEAGDEVEVDLVKGIIKNLTKNKEFKAKPFPEFMQNIMKAGGLIEFVK 159
>gi|116754164|ref|YP_843282.1| 3-isopropylmalate dehydratase, small subunit [Methanosaeta
thermophila PT]
gi|116665615|gb|ABK14642.1| 3-isopropylmalate dehydratase, small subunit [Methanosaeta
thermophila PT]
Length = 161
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 99/174 (56%), Gaps = 20/174 (11%)
Query: 69 TFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETK 128
G +V GD++DTD IIP +YL + +L + + GL +++++
Sbjct: 1 MIRGRAWVFGDDVDTDVIIPGKYL-----RTKDLRELAEHVMEGLDPSFSSKV------- 48
Query: 129 TKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEAR 188
+I+AG NFGCGSSRE AP+AL AG S +VA S+ARIF+RN++ G PL
Sbjct: 49 QPGDVIVAGKNFGCGSSREQAPLALKLAGISCIVARSFARIFYRNAINIG--LPLIEADV 106
Query: 189 LCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARKT 241
+CE G+VV ++++ R+I G+EY + + D L +++ GG+ A+ RK
Sbjct: 107 MCE---PGEVVEVDLSRGRVI--AGGREYTGRKLPDFLMEILNDGGLVAHRRKQ 155
>gi|269793210|ref|YP_003318114.1| 3-isopropylmalate dehydratase small subunit [Thermanaerovibrio
acidaminovorans DSM 6589]
gi|269100845|gb|ACZ19832.1| 3-isopropylmalate dehydratase, small subunit [Thermanaerovibrio
acidaminovorans DSM 6589]
Length = 167
Score = 107 bits (266), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 96/173 (55%), Gaps = 15/173 (8%)
Query: 69 TFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETK 128
TF G + DN+DTD IIPA YLT E+LG + + L + ++
Sbjct: 3 TFCGNVWAFEDNVDTDVIIPARYLTT-----HAPEELGRHCMEDLDPDFPSKV------- 50
Query: 129 TKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEAR 188
+ +++AG NFGCGSSREHAP+A+ G S VVA S+ARIF+RN++ G P+ A
Sbjct: 51 QRGDMLVAGENFGCGSSREHAPLAILGCGVSCVVASSFARIFYRNAINVG--LPIVEIAD 108
Query: 189 LCEECSTGDVVTIEIAESRLINHTTGKEYKLKPI-GDLGPVIDAGGIFAYARK 240
STGD++ +++ L N TTG+ P+ G G ++ +GG+ Y R+
Sbjct: 109 ARSFASTGDLLEVDLPSGTLRNLTTGQVRHAPPLSGIAGEIVSSGGLVNYVRR 161
>gi|383319015|ref|YP_005379856.1| 3-isopropylmalate dehydratase small subunit [Methanocella conradii
HZ254]
gi|379320385|gb|AFC99337.1| 3-isopropylmalate dehydratase, small subunit [Methanocella conradii
HZ254]
Length = 181
Score = 107 bits (266), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 96/166 (57%), Gaps = 20/166 (12%)
Query: 75 YVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKII 134
+ GD++DTD IIP +LT+ ++P E L +A G+ + D ++
Sbjct: 23 WKFGDDVDTDAIIPGRFLTI--NDPKE---LAKHAFEGVRPDFRPSTGD---------VV 68
Query: 135 IAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEECS 194
+AG NFGCGSSREHAP+AL AG V+A+S+ARIFFRNS+ G E R + +
Sbjct: 69 VAGENFGCGSSREHAPLALKGAGIKCVIAKSFARIFFRNSINIGLAM---LECREADRIA 125
Query: 195 TGDVVTIEIAESRLINHTTGKEYKLKPI-GDLGPVIDAGGIFAYAR 239
GDV +EI + + N T G+ Y+ P+ G L ++++GG+ YAR
Sbjct: 126 DGDV--LEIEGNTIKNLTKGETYEAAPLPGFLAEIVESGGLIEYAR 169
>gi|292669909|ref|ZP_06603335.1| 3-isopropylmalate dehydratase [Selenomonas noxia ATCC 43541]
gi|292648706|gb|EFF66678.1| 3-isopropylmalate dehydratase [Selenomonas noxia ATCC 43541]
Length = 167
Score = 107 bits (266), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 65/174 (37%), Positives = 92/174 (52%), Gaps = 15/174 (8%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
F G + GDNIDTD IIPA YL N E + L + + + T+
Sbjct: 2 FEGKVWRYGDNIDTDVIIPARYL-----NTFEPKALAEHCMEDIDTTFAKEV-------A 49
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
I++ G NFGCGSSREHAP+A+ A+G V+A S+ARIF+RN + G PL
Sbjct: 50 AGDIMVGGRNFGCGSSREHAPIAIAASGIPVVIAASFARIFYRNGINIG--LPLLEIGDD 107
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPI-GDLGPVIDAGGIFAYARKTG 242
E+ S GD + ++ A + N TTG ++ P+ G + + AGG+ Y R+ G
Sbjct: 108 VEKISAGDRLRVDTATGAIENLTTGDTFRAHPLPGFVQEIAQAGGLLNYIRENG 161
>gi|427406954|ref|ZP_18897159.1| 3-isopropylmalate dehydratase, small subunit [Selenomonas sp.
F0473]
gi|425707429|gb|EKU70473.1| 3-isopropylmalate dehydratase, small subunit [Selenomonas sp.
F0473]
Length = 168
Score = 107 bits (266), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 95/174 (54%), Gaps = 15/174 (8%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
F G + GDNIDTD IIPA YL N E + L ++ + + T+ +
Sbjct: 3 FEGKVWRYGDNIDTDVIIPARYL-----NTFEPKALAAHCMEDIDTTFA-------KNVA 50
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
I++ G NFGCGSSREHAP+++ A+G V+A S+ARIF+RN + G PL
Sbjct: 51 AGDIMVGGRNFGCGSSREHAPISIAASGVPVVIAASFARIFYRNGINIG--LPLLEIGDD 108
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPI-GDLGPVIDAGGIFAYARKTG 242
E+ S GD + ++ A ++N TTG ++ P+ G + + AGG+ Y ++ G
Sbjct: 109 VEKISAGDRLHVDTATGEILNLTTGDTFRAHPLPGFVQEIAAAGGLLNYIKENG 162
>gi|334129014|ref|ZP_08502889.1| 3-isopropylmalate dehydratase small subunit [Centipeda periodontii
DSM 2778]
gi|333385748|gb|EGK56975.1| 3-isopropylmalate dehydratase small subunit [Centipeda periodontii
DSM 2778]
Length = 168
Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 65/174 (37%), Positives = 93/174 (53%), Gaps = 15/174 (8%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
F G + GDNIDTD IIPA YL N E + L + + + T+ + +
Sbjct: 3 FEGKVWRYGDNIDTDVIIPARYL-----NTFEPKALAEHCMEDIDTTFAKEVVAGD---- 53
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
I++ G NFGCGSSREHAP+A+ A+G V+A S+ARIF+RN + G PL
Sbjct: 54 ---IMVGGKNFGCGSSREHAPIAIAASGVPVVIAASFARIFYRNGINIG--LPLLEIGDD 108
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPI-GDLGPVIDAGGIFAYARKTG 242
E+ S GD + ++ A + N TTG + P+ G + + AGG+ Y R+ G
Sbjct: 109 VEKISAGDRLRVDTATGAIENLTTGDTFHAHPLPGFVQDIARAGGLLNYIRENG 162
>gi|20089100|ref|NP_615175.1| 3-isopropylmalate dehydratase small subunit [Methanosarcina
acetivorans C2A]
gi|23396649|sp|Q8TU71.1|LEUD2_METAC RecName: Full=3-isopropylmalate dehydratase small subunit 2;
AltName: Full=Alpha-IPM isomerase 2; Short=IPMI 2;
AltName: Full=Isopropylmalate isomerase 2
gi|19913964|gb|AAM03655.1| 3-isopropylmalate dehydratase [Methanosarcina acetivorans C2A]
Length = 162
Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 63/172 (36%), Positives = 97/172 (56%), Gaps = 16/172 (9%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
G + GD++DTD +IP YL + P E L Y G+ + + + EN+
Sbjct: 1 MEGRAWKFGDDVDTDAVIPGRYLIF--NTPGE---LAKYTFEGVRPDFAKK-VHEND--- 51
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
I++AG NFGCGSSREHAP+AL + S V+A+S+ARIFFRN++ G P+ E
Sbjct: 52 ---IVVAGSNFGCGSSREHAPLALKGSKVSCVIAKSFARIFFRNAINIG--VPV-LECPN 105
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
+ GD + ++++ + N T G+ Y+ P+ D + ++D GG+ YARK
Sbjct: 106 TDRIDDGDELEVDLSTGDIQNITKGETYQATPLPDFVREIVDEGGLIEYARK 157
>gi|254457949|ref|ZP_05071376.1| 3-isopropylmalate dehydratase small subunit [Sulfurimonas
gotlandica GD1]
gi|373868944|ref|ZP_09605342.1| 3-isopropylmalate dehydratase small subunit [Sulfurimonas
gotlandica GD1]
gi|207085342|gb|EDZ62627.1| 3-isopropylmalate dehydratase small subunit [Sulfurimonas
gotlandica GD1]
gi|372471045|gb|EHP31249.1| 3-isopropylmalate dehydratase small subunit [Sulfurimonas
gotlandica GD1]
Length = 167
Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 67/175 (38%), Positives = 97/175 (55%), Gaps = 20/175 (11%)
Query: 68 ATFHGLCYVVGDNIDTDQIIPAEYL-TLVPSNPDEYEKLGSYALIGLPATYTTRFIDENE 126
A G + G +IDTD II A YL T VP E+L + + + N
Sbjct: 4 ANIDGKVWTFGKDIDTDLIIAARYLNTSVP------EELAKHVMEDADPEFV------NN 51
Query: 127 TKTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG-EIYPLDS 185
+ +I+AG NFGCGSSREHAP+AL AAG +A++A ++ARIF+RN+ G I+ L
Sbjct: 52 MRVG-DVIVAGENFGCGSSREHAPIALKAAGVAAIIAPTFARIFYRNAFNMGLPIFELKE 110
Query: 186 EARLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYAR 239
A E S GD +++++ + N TT K Y PI + + +IDAGG+ +A+
Sbjct: 111 SA----EISEGDEISVDMNAGTITNKTTNKSYDFIPIPEFMQELIDAGGLMNFAQ 161
>gi|282164632|ref|YP_003357017.1| 3-isopropylmalate dehydratase small subunit [Methanocella
paludicola SANAE]
gi|282156946|dbj|BAI62034.1| 3-isopropylmalate dehydratase small subunit [Methanocella
paludicola SANAE]
Length = 157
Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 67/171 (39%), Positives = 97/171 (56%), Gaps = 20/171 (11%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
F G + GDN+DTD IIP +YL +++ G +A+ G ID
Sbjct: 3 FRGKAWKYGDNVDTDVIIPGKYLRTA-----DFKTFGDHAMEG---------IDPRFKPE 48
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
+ II+AG NFGCGSSRE AP+AL AG S VVA+S+ARIFFRN++ G P+ EA +
Sbjct: 49 QGDIIVAGNNFGCGSSREQAPLALKYAGISCVVAKSFARIFFRNAINVG--LPI-VEADV 105
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYAR 239
+ GD+V +++ R + GKEY + + L ++++GG+ AY R
Sbjct: 106 FDAIQKGDIVEVDL--DRGLVTIGGKEYTSTKLPEFLQDILNSGGLVAYRR 154
>gi|11498237|ref|NP_069463.1| 3-isopropylmalate dehydratase small subunit [Archaeoglobus fulgidus
DSM 4304]
gi|3122336|sp|O29626.1|LEUD1_ARCFU RecName: Full=3-isopropylmalate dehydratase small subunit 1;
AltName: Full=Alpha-IPM isomerase 1; Short=IPMI 1;
AltName: Full=Isopropylmalate isomerase 1
gi|2649990|gb|AAB90610.1| 3-isopropylmalate dehydratase, small subunit (leuD-1)
[Archaeoglobus fulgidus DSM 4304]
Length = 161
Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 95/169 (56%), Gaps = 16/169 (9%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + GD+IDTD II +YL + +E E+L + L + K
Sbjct: 2 GRAWKFGDDIDTDVIIQGKYLVI-----NEPEELAKHVFENLRPEFAKEV-------KKG 49
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
++AG NFGCGSSREHAP+AL A G AV+A+SYARIFFRN++ G + L E + +
Sbjct: 50 DFVVAGENFGCGSSREHAPLALKATGIEAVIAKSYARIFFRNAINIG-LRVL--ECKETD 106
Query: 192 ECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYAR 239
+ GD + ++ + + N T G+EY + P+ D L +++ GG+ +A+
Sbjct: 107 KIEDGDELEVDYEKGVIYNKTKGEEYPINPLPDFLKEILEKGGLVEFAK 155
>gi|293402207|ref|ZP_06646345.1| 3-isopropylmalate dehydratase, small subunit [Erysipelotrichaceae
bacterium 5_2_54FAA]
gi|373452467|ref|ZP_09544380.1| 3-isopropylmalate dehydratase small subunit [Eubacterium sp.
3_1_31]
gi|291304314|gb|EFE45565.1| 3-isopropylmalate dehydratase, small subunit [Erysipelotrichaceae
bacterium 5_2_54FAA]
gi|371966336|gb|EHO83826.1| 3-isopropylmalate dehydratase small subunit [Eubacterium sp.
3_1_31]
Length = 163
Score = 106 bits (265), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 61/150 (40%), Positives = 86/150 (57%), Gaps = 14/150 (9%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + GDN+DTD IIPA YL S+P E L + + A + N+ K
Sbjct: 5 GYAHKYGDNVDTDVIIPARYLNT--SDPKE---LAEKCMCDIDADFV------NKVKAN- 52
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
I++AG NFGCGSSREHAP+A+ A+G S V+A+S+ARIF+RN++ G P+ + E
Sbjct: 53 DIMVAGFNFGCGSSREHAPIAIKASGISCVIAKSFARIFYRNAINIG--LPILECPKASE 110
Query: 192 ECSTGDVVTIEIAESRLINHTTGKEYKLKP 221
T D + I +INHT G+ Y+ +P
Sbjct: 111 RIDTADEIEINFDTGEIINHTKGESYQAEP 140
>gi|376259500|ref|YP_005146220.1| 3-isopropylmalate dehydratase small subunit [Clostridium sp.
BNL1100]
gi|373943494|gb|AEY64415.1| 3-isopropylmalate dehydratase, small subunit [Clostridium sp.
BNL1100]
Length = 162
Score = 106 bits (265), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 62/165 (37%), Positives = 95/165 (57%), Gaps = 15/165 (9%)
Query: 78 GDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKIIIAG 137
G+N+DTD IIPA YL S+P E L S+ + L +T R K +++AG
Sbjct: 11 GNNVDTDVIIPARYLN--TSDPAE---LASHCMEDLDDKFTQRV-------QKGDVMVAG 58
Query: 138 GNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEECSTGD 197
NFGCGSSREHAP+++ A+G S V+AE++ARIF+RNS+ G P+ ++ D
Sbjct: 59 KNFGCGSSREHAPISIKASGISCVIAETFARIFYRNSINIG--LPILECPEAAKDIKDDD 116
Query: 198 VVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARKT 241
V I+ + + N TTGK Y+ +P + + +I + G+ Y + +
Sbjct: 117 QVEIDFDKGLIKNLTTGKTYQGQPFPEFMQEIISSDGLIQYIKNS 161
>gi|88603607|ref|YP_503785.1| 3-isopropylmalate dehydratase small subunit [Methanospirillum
hungatei JF-1]
gi|88189069|gb|ABD42066.1| 3-isopropylmalate dehydratase, small subunit [Methanospirillum
hungatei JF-1]
Length = 162
Score = 106 bits (265), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 71/166 (42%), Positives = 98/166 (59%), Gaps = 18/166 (10%)
Query: 75 YVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKII 134
+ GDNIDTD IIP +LT+ ++P E L ++A G+ ++ E K K II
Sbjct: 4 WKFGDNIDTDAIIPGRFLTI--NDPAE---LATHAFEGIRDEFS------KEVK-KGDII 51
Query: 135 IAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEECS 194
+AG NFGCGSSREHAP+AL AG VVA+S+ARIF+RNS+ G + + A E S
Sbjct: 52 VAGRNFGCGSSREHAPLALTGAGIQMVVAQSFARIFYRNSINVGLLPVICPRA---SEIS 108
Query: 195 TGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYAR 239
D V + E L +GK+ +P+ + L +IDAGG+ AYA+
Sbjct: 109 ETDQVVPHLDEGYL--DVSGKKLPTEPVPEFLRRIIDAGGLVAYAK 152
>gi|389852284|ref|YP_006354518.1| 3-isopropylmalate dehydratase small subunit [Pyrococcus sp. ST04]
gi|388249590|gb|AFK22443.1| 3-isopropylmalate dehydratase small subunit [Pyrococcus sp. ST04]
Length = 164
Score = 106 bits (265), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 66/173 (38%), Positives = 96/173 (55%), Gaps = 21/173 (12%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + GD++DTD IIPA YL S+P E L + L L + E + K
Sbjct: 5 GRAWKYGDHVDTDVIIPARYLNT--SDPKE---LAQHVLEDL----------DPEFRFKM 49
Query: 132 K---IIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEAR 188
K II+AG NFGCGSSREHAP+A+ AAG S V+A+S+ARIF+RN++ G P+
Sbjct: 50 KPGDIIVAGENFGCGSSREHAPLAIKAAGVSCVIAKSFARIFYRNAINIG--LPILEAPE 107
Query: 189 LCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
+ TGD + ++ + + N T G+ Y P D + +I AGG+ + ++
Sbjct: 108 AVDRIDTGDELEVDFSTGEIRNLTKGEVYHANPFPDFVMEIIKAGGLIEWTKR 160
>gi|326202889|ref|ZP_08192756.1| 3-isopropylmalate dehydratase, small subunit [Clostridium
papyrosolvens DSM 2782]
gi|325986966|gb|EGD47795.1| 3-isopropylmalate dehydratase, small subunit [Clostridium
papyrosolvens DSM 2782]
Length = 162
Score = 106 bits (265), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 63/161 (39%), Positives = 93/161 (57%), Gaps = 15/161 (9%)
Query: 78 GDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKIIIAG 137
G+N+DTD IIPA YL S+P E L S+ + L +T R K +++AG
Sbjct: 11 GNNVDTDVIIPARYLN--TSDPAE---LASHCMEDLDDKFTQRV-------QKGDVMVAG 58
Query: 138 GNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEECSTGD 197
NFGCGSSREHAP+++ A+G S V+AE++ARIF+RNS+ G P+ ++ D
Sbjct: 59 KNFGCGSSREHAPISIKASGISCVIAETFARIFYRNSINIG--LPILECPEAAKDIKDDD 116
Query: 198 VVTIEIAESRLINHTTGKEYKLKPI-GDLGPVIDAGGIFAY 237
V I+ + + N TTGK Y+ +P G + +I + G+ Y
Sbjct: 117 QVEIDFDKGLIKNLTTGKTYQGQPFPGFMQEIISSDGLIQY 157
>gi|160938760|ref|ZP_02086112.1| hypothetical protein CLOBOL_03655 [Clostridium bolteae ATCC
BAA-613]
gi|158438459|gb|EDP16218.1| hypothetical protein CLOBOL_03655 [Clostridium bolteae ATCC
BAA-613]
Length = 171
Score = 106 bits (265), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 95/166 (57%), Gaps = 15/166 (9%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
F G +G+NIDTDQI P YL L +NP+E +GS+ L G+ F
Sbjct: 5 FAGQALALGNNIDTDQIYPGRYLAL--TNPEE---IGSHCLEGVDEGIARNF-------P 52
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
K II+AG NFGCGSSREHA +AL G AVVAES+ARIF+RN++ G PL +
Sbjct: 53 KGGIIVAGTNFGCGSSREHAAIALLNMGAGAVVAESFARIFYRNAINLG--LPLLVCKGI 110
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLG-PVIDAGGI 234
+ +G + I + L N TG++++ + IG+ +++AGGI
Sbjct: 111 GGKVESGQNLEINMTAGVLKNLDTGEQHQCETIGEYAMSILEAGGI 156
>gi|390940690|ref|YP_006404427.1| 3-isopropylmalate dehydratase small subunit [Sulfurospirillum
barnesii SES-3]
gi|390193797|gb|AFL68852.1| 3-isopropylmalate dehydratase, small subunit [Sulfurospirillum
barnesii SES-3]
Length = 162
Score = 106 bits (265), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 73/175 (41%), Positives = 98/175 (56%), Gaps = 20/175 (11%)
Query: 68 ATFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENET 127
+T G + GDNIDTD II A YL S+P E L + + + ++
Sbjct: 2 STISGKVWCFGDNIDTDLIIAARYLN--TSDPKE---LAKHVMEDADPEFVSKV------ 50
Query: 128 KTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG-EIYPLDSE 186
II+AG NFGCGSSREHAP+AL AAG SAVVA+S+ARIF+RN+ TG I+ L +
Sbjct: 51 -KAGDIIVAGENFGCGSSREHAPIALKAAGVSAVVAKSFARIFYRNAFNTGLPIFELSN- 108
Query: 187 ARLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
E G+ + I + ES I H + K Y PI + ++DAGG+ YA+K
Sbjct: 109 ---TEAIQEGESIVISM-ESGEITHGS-KTYTFTPIPPFMQELLDAGGLMNYAQK 158
>gi|307721134|ref|YP_003892274.1| 3-isopropylmalate dehydratase small subunit [Sulfurimonas
autotrophica DSM 16294]
gi|306979227|gb|ADN09262.1| 3-isopropylmalate dehydratase, small subunit [Sulfurimonas
autotrophica DSM 16294]
Length = 168
Score = 106 bits (265), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 97/174 (55%), Gaps = 18/174 (10%)
Query: 68 ATFHGLCYVVGDNIDTDQIIPAEYL-TLVPSNPDEYEKLGSYALIGLPATYTTRFIDENE 126
A +G + G +IDTD II A YL T VP E+L + + + + I +
Sbjct: 4 ANINGKVWKFGKDIDTDLIIAARYLNTSVP------EELAKHVMEDADPEFVNKMISGD- 56
Query: 127 TKTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSE 186
+I+A NFGCGSSREHAP+AL AAG +A++A ++ARIF+RN+ G P+ E
Sbjct: 57 ------VIVADENFGCGSSREHAPIALKAAGVAAIIAPTFARIFYRNAFNMG--LPI-FE 107
Query: 187 ARLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYAR 239
+ E GD +++++ + N +T K Y PI + + +IDAGG+ +A+
Sbjct: 108 LKEATEIKEGDDISVDMNAGTITNKSTNKTYNFTPIPEFMQELIDAGGLMNFAK 161
>gi|157737258|ref|YP_001489941.1| 3-isopropylmalate dehydratase small subunit [Arcobacter butzleri
RM4018]
gi|315636975|ref|ZP_07892199.1| 3-isopropylmalate dehydratase small subunit [Arcobacter butzleri
JV22]
gi|384155670|ref|YP_005538485.1| 3-isopropylmalate dehydratase small subunit [Arcobacter butzleri
ED-1]
gi|172045647|sp|A8ETJ8.1|LEUD_ARCB4 RecName: Full=3-isopropylmalate dehydratase small subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|157699112|gb|ABV67272.1| 3-isopropylmalate dehydratase, small subunit [Arcobacter butzleri
RM4018]
gi|315478805|gb|EFU69514.1| 3-isopropylmalate dehydratase small subunit [Arcobacter butzleri
JV22]
gi|345469224|dbj|BAK70675.1| 3-isopropylmalate dehydratase small subunit [Arcobacter butzleri
ED-1]
Length = 166
Score = 106 bits (265), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 69/173 (39%), Positives = 93/173 (53%), Gaps = 18/173 (10%)
Query: 69 TFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETK 128
T G + G NIDTD II A YL N + E L Y + + +
Sbjct: 3 TITGKVWNFGANIDTDVIIAARYL-----NSSDPEHLAKYVMEDADPEFPKKL------- 50
Query: 129 TKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG-EIYPLDSEA 187
K II+AG NFGCGSSREHAP+AL AAG +AVVA S+ARIF+RN+ G I+ L
Sbjct: 51 KKGDIIVAGENFGCGSSREHAPIALKAAGIAAVVAPSFARIFYRNAFNMGLPIFELPESL 110
Query: 188 RLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYAR 239
+ E G+ ++I + + + N+TT K YK PI + +I GG+ YA+
Sbjct: 111 EIKE----GEEISINLDKGEITNNTTKKTYKFIPIPPFMQELIATGGLINYAK 159
>gi|270308133|ref|YP_003330191.1| 3-isopropylmalate dehydratase, small subunit [Dehalococcoides sp.
VS]
gi|270154025|gb|ACZ61863.1| 3-isopropylmalate dehydratase, small subunit [Dehalococcoides sp.
VS]
Length = 166
Score = 106 bits (264), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 62/172 (36%), Positives = 95/172 (55%), Gaps = 15/172 (8%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
G + G+N+DTD IIPA YL N E + L + + + + +
Sbjct: 2 LKGFVHKYGENVDTDAIIPARYL-----NVSEPKALAEHCMEDIDLDFVKKV-------K 49
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
I+A NFGCGSSREHAP+++ A+G SAV+A S+ARIFFRN++ G PL A
Sbjct: 50 PGDFIVATTNFGCGSSREHAPISIKASGVSAVIASSFARIFFRNAINIG--LPLLESAEA 107
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
E+ ++GD + I++ + + TTG+ + KP + + +I AGG+ Y R+
Sbjct: 108 AEKINSGDELEIDLESGVIKDLTTGESFAAKPYPEFMSRLIKAGGLIEYTRE 159
>gi|452205051|ref|YP_007485180.1| 3-isopropylmalate dehydratase small subunit [Dehalococcoides
mccartyi BTF08]
gi|452112107|gb|AGG07838.1| 3-isopropylmalate dehydratase small subunit [Dehalococcoides
mccartyi BTF08]
Length = 166
Score = 106 bits (264), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 62/172 (36%), Positives = 96/172 (55%), Gaps = 15/172 (8%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
G + G+N+DTD IIPA YL N E + L + + + + +
Sbjct: 2 LKGFVHKYGENVDTDAIIPARYL-----NVSEPKALAEHCMEDIDLDFVKKV-------K 49
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
I+A NFGCGSSREHAP+++ A+G SAV+A S+ARIFFRN++ G PL A
Sbjct: 50 PGDFIVATTNFGCGSSREHAPISIKASGVSAVIAASFARIFFRNAINIG--LPLLESAEA 107
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
E+ ++GD + I++ + + TTG+++ KP + + +I AGG+ Y R+
Sbjct: 108 AEKINSGDELEIDLETGIIKDLTTGEKFSAKPYPEFMSRLIKAGGLIEYTRE 159
>gi|169830565|ref|YP_001716547.1| 3-isopropylmalate dehydratase small subunit [Candidatus
Desulforudis audaxviator MP104C]
gi|169637409|gb|ACA58915.1| 3-isopropylmalate dehydratase, small subunit [Candidatus
Desulforudis audaxviator MP104C]
Length = 164
Score = 106 bits (264), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 66/172 (38%), Positives = 93/172 (54%), Gaps = 15/172 (8%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
G + GDNIDTD IIPA YL S+P E L + + G + +
Sbjct: 3 LEGSAWKFGDNIDTDVIIPARYLNT--SDPAE---LAKHCMEGADPAFAGKV-------Q 50
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
III G NFGCGSSREHAP+A+ AG S V+A ++ARIF+RN+ G P+
Sbjct: 51 PGDIIIGGNNFGCGSSREHAPLAIKGAGVSCVIARTFARIFYRNAFNIG--LPILECPAA 108
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
E TGD V ++ A ++ N +TG E++ KPI + +I AGG+ + ++
Sbjct: 109 VEGIRTGDRVAVDAAAGKIKNLSTGAEFEAKPIPPFMREIIAAGGLIEHVKR 160
>gi|312136808|ref|YP_004004145.1| 3-isopropylmalate dehydratase small subunit [Methanothermus
fervidus DSM 2088]
gi|311224527|gb|ADP77383.1| 3-isopropylmalate dehydratase, small subunit [Methanothermus
fervidus DSM 2088]
Length = 160
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 94/171 (54%), Gaps = 16/171 (9%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
G + GDNIDTD IIP YLT+ +P +KL + + G+ + +
Sbjct: 1 MKGRVWKFGDNIDTDLIIPGRYLTI--RDP---KKLAKHLMEGIDPNFHKKI-------K 48
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
K I+AG NFGCGSSREHAP+A+ AG AV+AES+ARIF+RN++ G P +
Sbjct: 49 KGDFIVAGKNFGCGSSREHAPLAMKGAGIGAVIAESFARIFYRNAINLG--IPAIEAPNV 106
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYAR 239
++ +V+ I++ E +I G+ K K + + + +I+ GG+ Y +
Sbjct: 107 SKKIKNNEVIEIDLKEG-IIRKENGEIIKFKKLPEFMLKIIEKGGLIQYLK 156
>gi|420157379|ref|ZP_14664215.1| 3-isopropylmalate dehydratase, small subunit [Clostridium sp.
MSTE9]
gi|394756294|gb|EJF39399.1| 3-isopropylmalate dehydratase, small subunit [Clostridium sp.
MSTE9]
Length = 161
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 90/166 (54%), Gaps = 15/166 (9%)
Query: 71 HGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTK 130
G + GDN+DTD IIPA YL N +++L + ++ + A + R
Sbjct: 4 QGTVHKYGDNVDTDVIIPARYL-----NTSSHQELAQHCMVDIDADFVNRV-------KP 51
Query: 131 YKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLC 190
II+A NFGCGSSREHAP+A+ A+G S V+A ++ARIF+RNS+ G P+
Sbjct: 52 GDIIVANKNFGCGSSREHAPIAIKASGISCVIASTFARIFYRNSINIG--LPILECEEAA 109
Query: 191 EECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIF 235
E GD V+++ + + TTGK Y+ +P + +I GG+
Sbjct: 110 REIQAGDEVSVDFDTGVIRDLTTGKTYQAQPFPPFIQNIISKGGLL 155
>gi|153815643|ref|ZP_01968311.1| hypothetical protein RUMTOR_01879 [Ruminococcus torques ATCC 27756]
gi|317502432|ref|ZP_07960596.1| 3-isopropylmalate dehydratase [Lachnospiraceae bacterium 8_1_57FAA]
gi|331090306|ref|ZP_08339190.1| 3-isopropylmalate dehydratase small subunit [Lachnospiraceae
bacterium 3_1_46FAA]
gi|336440685|ref|ZP_08620264.1| 3-isopropylmalate dehydratase small subunit [Lachnospiraceae
bacterium 1_1_57FAA]
gi|145847074|gb|EDK23992.1| 3-isopropylmalate dehydratase, small subunit [Ruminococcus torques
ATCC 27756]
gi|316896170|gb|EFV18277.1| 3-isopropylmalate dehydratase [Lachnospiraceae bacterium 8_1_57FAA]
gi|330401441|gb|EGG81026.1| 3-isopropylmalate dehydratase small subunit [Lachnospiraceae
bacterium 3_1_46FAA]
gi|336012368|gb|EGN42287.1| 3-isopropylmalate dehydratase small subunit [Lachnospiraceae
bacterium 1_1_57FAA]
Length = 163
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 91/168 (54%), Gaps = 15/168 (8%)
Query: 71 HGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTK 130
HG + GDN+DTD IIPA YL N + ++L S+A+ + + +
Sbjct: 4 HGHVFKYGDNVDTDVIIPARYL-----NSFDAQELASHAMADIDPDFVKKV-------QS 51
Query: 131 YKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLC 190
II+A NFGCGSSREHAP+ L AG S ++AE++ARIF+RN++ G P+
Sbjct: 52 GDIIVANKNFGCGSSREHAPLCLKTAGVSCIIAETFARIFYRNAINIG--LPIIECPEAA 109
Query: 191 EECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAY 237
+ GD V ++ + N T G E+K +P + + +I AGG+ Y
Sbjct: 110 QGIEAGDEVEVDFDSGMIYNRTKGTEFKGQPFPEFMQKLIAAGGLVNY 157
>gi|256826884|ref|YP_003150843.1| 3-isopropylmalate dehydratase, small subunit [Cryptobacterium
curtum DSM 15641]
gi|256583027|gb|ACU94161.1| 3-isopropylmalate dehydratase, small subunit [Cryptobacterium
curtum DSM 15641]
Length = 178
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/173 (39%), Positives = 98/173 (56%), Gaps = 17/173 (9%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
F G + G +IDTD IIPA YL +NP+ E L +A+ T+ +T
Sbjct: 3 FKGTAHTFGRDIDTDVIIPARYL----NNPNPQE-LAKHAMEDADPTFV-------DTVQ 50
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG-EIYPLDSEAR 188
I++A NFGCGSSREHAPVAL AAG VVA+S+ARIF+RNS+ TG I A
Sbjct: 51 SGDILVAQENFGCGSSREHAPVALKAAGIDCVVAKSFARIFYRNSINTGLAIMECPEAAE 110
Query: 189 LCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
+ +E GDVV+I+ +++ TT K + +P + +I+ GG+ + ++
Sbjct: 111 VIKE---GDVVSIDADTGLIVDETTKKHFMAQPFPTFIRDIIEDGGLVEHTKR 160
>gi|167757625|ref|ZP_02429752.1| hypothetical protein CLORAM_03175 [Clostridium ramosum DSM 1402]
gi|365831893|ref|ZP_09373438.1| 3-isopropylmalate dehydratase, small subunit [Coprobacillus sp.
3_3_56FAA]
gi|374627195|ref|ZP_09699603.1| 3-isopropylmalate dehydratase, small subunit [Coprobacillus sp.
8_2_54BFAA]
gi|167702622|gb|EDS17201.1| 3-isopropylmalate dehydratase, small subunit [Clostridium ramosum
DSM 1402]
gi|365261287|gb|EHM91213.1| 3-isopropylmalate dehydratase, small subunit [Coprobacillus sp.
3_3_56FAA]
gi|373913740|gb|EHQ45577.1| 3-isopropylmalate dehydratase, small subunit [Coprobacillus sp.
8_2_54BFAA]
Length = 159
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 92/166 (55%), Gaps = 15/166 (9%)
Query: 75 YVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKII 134
Y GDN+DTD IIPA YL N + ++L S+A++ + + +T II
Sbjct: 4 YKYGDNVDTDVIIPARYL-----NSFDAKELASHAMVDIDPDFA-------KTVESGDII 51
Query: 135 IAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEECS 194
+AG NFGCGSSREHAP+ L AG V+AES+ARIF+RNS+ G +P+ +
Sbjct: 52 VAGKNFGCGSSREHAPLCLKTAGTKCVIAESFARIFYRNSINIG--FPIMECPEAVAGIN 109
Query: 195 TGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYAR 239
GD VT++ + N T G+ Y+ +P + L +I+ G+ Y
Sbjct: 110 QGDEVTVDFTTGLITNITKGETYQSQPFPEFLQKMIELDGLVNYVN 155
>gi|304314981|ref|YP_003850128.1| 3-isopropylmalate dehydratase, small subunit [Methanothermobacter
marburgensis str. Marburg]
gi|302588440|gb|ADL58815.1| 3-isopropylmalate dehydratase, small subunit [Methanothermobacter
marburgensis str. Marburg]
Length = 166
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/173 (38%), Positives = 98/173 (56%), Gaps = 19/173 (10%)
Query: 69 TFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETK 128
G + GDNIDTD IIP YL ++L S+ + G + + E K
Sbjct: 4 VIRGRVWRFGDNIDTDMIIPGRYLRTFS-----LDELASHVMEGARPEFAS------EVK 52
Query: 129 TKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEAR 188
+ II+AG NFGCGSSRE APVAL AG +A++AES+ARIF+RN++ G +P+ AR
Sbjct: 53 -RGDIIVAGRNFGCGSSREQAPVALKHAGVAAIIAESFARIFYRNAINIG--FPV-IMAR 108
Query: 189 LCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD--LGPVIDAGGIFAYAR 239
+ + + GD ++ ++ + N T+GK Y++KP D L + D G + Y R
Sbjct: 109 V--DAADGDEISADLKGGFIENLTSGKRYEMKPFNDYMLSILQDGGLVNHYIR 159
>gi|189485457|ref|YP_001956398.1| 3-isopropylmalate dehydratase small subunit [uncultured Termite
group 1 bacterium phylotype Rs-D17]
gi|259494467|sp|B1H0A5.1|LEUD_UNCTG RecName: Full=3-isopropylmalate dehydratase small subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|170287416|dbj|BAG13937.1| 3-isopropylmalate dehydratase small subunit [uncultured Termite
group 1 bacterium phylotype Rs-D17]
Length = 163
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 93/173 (53%), Gaps = 19/173 (10%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
G + G N++TD+IIPA YL ++P + + Y ID+N K
Sbjct: 6 LKGKVHKYGSNVNTDEIIPARYLN--TTDPT------------ILSKYCMEDIDKNFVKN 51
Query: 130 KY--KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEA 187
II+A NFGCGSSREHAP+A+ A+G SAV+A S+ARIFFRNS+ G P+
Sbjct: 52 VKAGDIIVAENNFGCGSSREHAPIAIKASGISAVIANSFARIFFRNSINIG--LPILESQ 109
Query: 188 RLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYAR 239
+ + GD V I + + + N T + Y+ +P + + VI +GG+ Y +
Sbjct: 110 KAVKAIENGDAVEINLTKGIIKNITKNESYQSQPFPEFMQKVIKSGGLLGYIK 162
>gi|294101113|ref|YP_003552971.1| 3-isopropylmalate dehydratase small subunit [Aminobacterium
colombiense DSM 12261]
gi|293616093|gb|ADE56247.1| 3-isopropylmalate dehydratase, small subunit [Aminobacterium
colombiense DSM 12261]
Length = 171
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 91/173 (52%), Gaps = 15/173 (8%)
Query: 69 TFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETK 128
T G + G++IDTD IIPA YLT SN E LG + + + + R
Sbjct: 4 TIKGKAWAYGNHIDTDVIIPARYLT--SSNEKE---LGKHCMEDIDVDFYKRV------- 51
Query: 129 TKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEAR 188
+I+A NFGCGSSREHAP+A+ AGCS V+A S+ARIFFRN++ G P+
Sbjct: 52 NSGDMIVAKENFGCGSSREHAPLAIKGAGCSCVIAASFARIFFRNAINVG--LPIFECPE 109
Query: 189 LCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
+ TGD + I + N T GK + + P L +I+ GG+ Y ++
Sbjct: 110 AADSIETGDEIEINTETGTIENRTKGKVFSVTPFSPFLQELIERGGLVPYVKE 162
>gi|167038691|ref|YP_001661676.1| 3-isopropylmalate dehydratase small subunit [Thermoanaerobacter sp.
X514]
gi|300913749|ref|ZP_07131066.1| 3-isopropylmalate dehydratase, small subunit [Thermoanaerobacter
sp. X561]
gi|307723234|ref|YP_003902985.1| 3-isopropylmalate dehydratase small subunit [Thermoanaerobacter sp.
X513]
gi|166852931|gb|ABY91340.1| 3-isopropylmalate dehydratase, small subunit [Thermoanaerobacter
sp. X514]
gi|300890434|gb|EFK85579.1| 3-isopropylmalate dehydratase, small subunit [Thermoanaerobacter
sp. X561]
gi|307580295|gb|ADN53694.1| 3-isopropylmalate dehydratase, small subunit [Thermoanaerobacter
sp. X513]
Length = 160
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/164 (37%), Positives = 93/164 (56%), Gaps = 15/164 (9%)
Query: 78 GDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKIIIAG 137
GDNIDTD IIPA +L S+P E L + + L + + + E + I++ G
Sbjct: 9 GDNIDTDVIIPARFLN--TSDPQE---LAQHCMEDLDKDFKNK-VKEGD------ILVVG 56
Query: 138 GNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEECSTGD 197
NFGCGSSREHAP+A+ A+G S ++A+S+ARIFFRN++ G P+ + GD
Sbjct: 57 ENFGCGSSREHAPIAIKASGISCIIAKSFARIFFRNAINIG--LPILECKEAVDGIEEGD 114
Query: 198 VVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
+V ++ + N T G E+K +P D + ++ GG+ Y R+
Sbjct: 115 IVLVDTDNGIIKNLTKGTEFKAQPFPDFIKEIMKYGGLINYVRE 158
>gi|239626877|ref|ZP_04669908.1| homoaconitase [Clostridiales bacterium 1_7_47_FAA]
gi|239517023|gb|EEQ56889.1| homoaconitase [Clostridiales bacterium 1_7_47FAA]
Length = 171
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/169 (39%), Positives = 98/169 (57%), Gaps = 15/169 (8%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G V+G+NIDTDQI P +L + ++P E +GS+ L G+ + + F K
Sbjct: 7 GRIIVLGNNIDTDQIYPGRFLAI--TDPGE---IGSHCLGGVDESIASSF-------PKG 54
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
I++AG NFGCGSSREHAP+AL G SAV+A+S+ARIFFRNS+ G PL + +
Sbjct: 55 GIVVAGTNFGCGSSREHAPIALLNMGASAVLADSFARIFFRNSINLG--LPLIICKGIGK 112
Query: 192 ECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLG-PVIDAGGIFAYAR 239
E G + ++I + + TGK Y + +G+ +++AGGI R
Sbjct: 113 EVHDGQTLKLDIRKGVVTVEETGKVYVCEQLGEHALNILEAGGIKPLMR 161
>gi|237735178|ref|ZP_04565659.1| homoaconitase [Mollicutes bacterium D7]
gi|229381954|gb|EEO32045.1| homoaconitase [Coprobacillus sp. D7]
Length = 159
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 92/166 (55%), Gaps = 15/166 (9%)
Query: 75 YVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKII 134
Y GDN+DTD IIPA YL N + ++L S+A++ + + +T II
Sbjct: 4 YKYGDNVDTDVIIPARYL-----NSFDAKELASHAMVDIDPDFA-------KTVESGDII 51
Query: 135 IAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEECS 194
+AG NFGCGSSREHAP+ L AG V+AES+ARIF+RNS+ G +P+ +
Sbjct: 52 VAGKNFGCGSSREHAPLCLKTAGTKCVIAESFARIFYRNSINIG--FPIMECPDAVAGIN 109
Query: 195 TGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYAR 239
GD VT++ + N T G+ Y+ +P + L +I+ G+ Y
Sbjct: 110 QGDEVTVDFTTGLITNITKGETYQSQPFPEFLQKMIELDGLVNYVN 155
>gi|147669390|ref|YP_001214208.1| 3-isopropylmalate dehydratase small subunit [Dehalococcoides sp.
BAV1]
gi|146270338|gb|ABQ17330.1| 3-isopropylmalate dehydratase, small subunit [Dehalococcoides sp.
BAV1]
Length = 166
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/175 (38%), Positives = 97/175 (55%), Gaps = 21/175 (12%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
G + G+N+DTD IIPA YL + S P A + ID N K
Sbjct: 2 LKGFVHKYGENVDTDAIIPARYLNV--SEPKAL------------AEHCMEDIDLNFVK- 46
Query: 130 KYK---IIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSE 186
K K I+ NFGCGSSREHAP+++ A+G SAV+A S+ARIFFRN++ G PL
Sbjct: 47 KVKPGDFIVTTTNFGCGSSREHAPISIKASGVSAVIAASFARIFFRNAINIG--LPLLES 104
Query: 187 ARLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
A E+ ++GD + I++ + + TTG+++ KP + + +I AGG+ Y R+
Sbjct: 105 AEAAEKINSGDELEIDLETGIIKDLTTGEKFSAKPYPEFMSRLIKAGGLIEYTRE 159
>gi|15669463|ref|NP_248273.1| 3-isopropylmalate dehydratase LeuD [Methanocaldococcus jannaschii
DSM 2661]
gi|3122345|sp|Q58673.1|LEUD_METJA RecName: Full=Isopropylmalate/citramalate isomerase small subunit;
AltName: Full=(R)-2-methylmalate dehydratase; AltName:
Full=(R)-citramalate dehydratase; AltName:
Full=3-isopropylmalate dehydratase; AltName:
Full=Alpha-isopropylmalate dehydratase; AltName:
Full=Citraconate hydratase; AltName:
Full=Isopropylmalate isomerase; Short=IPMI; AltName:
Full=Maleate hydratase; Short=Malease
gi|1591913|gb|AAB99283.1| 3-isopropylmalate dehydratase (leuD) [Methanocaldococcus jannaschii
DSM 2661]
Length = 168
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 97/174 (55%), Gaps = 15/174 (8%)
Query: 68 ATFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENET 127
+ G + G+N+DTD I+PA YL V + P+E L + + G + + +
Sbjct: 3 SIIKGRVWKFGNNVDTDAILPARYL--VYTKPEE---LAQFVMTGADPDFPKKVKPGD-- 55
Query: 128 KTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEA 187
II+ G NFGCGSSREHAP+ L AG S V+AES+ARIF+RN++ G PL
Sbjct: 56 -----IIVGGKNFGCGSSREHAPLGLKGAGISCVIAESFARIFYRNAINVG--LPLIECK 108
Query: 188 RLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
+ E+ + GD + + + + N TTG+ K + + + + +++AGG+ Y +K
Sbjct: 109 GISEKVNEGDELEVNLETGEIKNLTTGEVLKGQKLPEFMMEILEAGGLMPYLKK 162
>gi|414145377|pdb|3VBA|A Chain A, Crystal Structure Of Methanogen 3-Isopropylmalate
Isomerase Small Subunit
gi|414145378|pdb|3VBA|B Chain B, Crystal Structure Of Methanogen 3-Isopropylmalate
Isomerase Small Subunit
gi|414145379|pdb|3VBA|C Chain C, Crystal Structure Of Methanogen 3-Isopropylmalate
Isomerase Small Subunit
gi|414145380|pdb|3VBA|D Chain D, Crystal Structure Of Methanogen 3-Isopropylmalate
Isomerase Small Subunit
gi|414145381|pdb|3VBA|E Chain E, Crystal Structure Of Methanogen 3-Isopropylmalate
Isomerase Small Subunit
gi|414145382|pdb|3VBA|F Chain F, Crystal Structure Of Methanogen 3-Isopropylmalate
Isomerase Small Subunit
Length = 176
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 97/174 (55%), Gaps = 15/174 (8%)
Query: 68 ATFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENET 127
+ G + G+N+DTD I+PA YL V + P+E L + + G + + +
Sbjct: 3 SIIKGRVWKFGNNVDTDAILPARYL--VYTKPEE---LAQFVMTGADPDFPKKVKPGD-- 55
Query: 128 KTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEA 187
II+ G NFGCGSSREHAP+ L AG S V+AES+ARIF+RN++ G PL
Sbjct: 56 -----IIVGGKNFGCGSSREHAPLGLKGAGISCVIAESFARIFYRNAINVG--LPLIECK 108
Query: 188 RLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
+ E+ + GD + + + + N TTG+ K + + + + +++AGG+ Y +K
Sbjct: 109 GISEKVNEGDELEVNLETGEIKNLTTGEVLKGQKLPEFMMEILEAGGLMPYLKK 162
>gi|156937098|ref|YP_001434894.1| 3-isopropylmalate dehydratase small subunit [Ignicoccus hospitalis
KIN4/I]
gi|156566082|gb|ABU81487.1| 3-isopropylmalate dehydratase, small subunit [Ignicoccus hospitalis
KIN4/I]
Length = 186
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 91/167 (54%), Gaps = 14/167 (8%)
Query: 77 VGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKIIIA 136
+GDNIDTD IIP Y + +Y +L + L R + +++A
Sbjct: 28 LGDNIDTDMIIPFRY----KAKTTDYYELAKHVFEDLDPELAKRIKPGD-------VVVA 76
Query: 137 GGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEECSTG 196
G NFG GSSRE AP+A+ +G SAV+A+S+ARIFFRN++ G P+ + +E G
Sbjct: 77 GKNFGMGSSREQAPIAIKYSGVSAVIAKSFARIFFRNAINIG--LPVIEAPEVVDETEEG 134
Query: 197 DVVTIEIAESRLINHTTGKEYKLKPIGDL-GPVIDAGGIFAYARKTG 242
D + +++ + + N T GKEY KP + V+ GGI+ Y +K G
Sbjct: 135 DELEVDLEKGVIRNLTKGKEYSFKPYPPMIMEVMKEGGIYEYFKKHG 181
>gi|357058963|ref|ZP_09119809.1| hypothetical protein HMPREF9334_01526 [Selenomonas infelix ATCC
43532]
gi|355373309|gb|EHG20630.1| hypothetical protein HMPREF9334_01526 [Selenomonas infelix ATCC
43532]
Length = 167
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 94/174 (54%), Gaps = 15/174 (8%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
F G + GDNIDTD IIPA YL N E + L ++ + + T+ + +
Sbjct: 2 FEGKVWRYGDNIDTDVIIPARYL-----NTFEPKALAAHCMEDIDTTFAGNVAEGD---- 52
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
I++ G NFGCGSSREHAP+++ A+G V+A S+ARIF+RN + G PL
Sbjct: 53 ---IMVGGRNFGCGSSREHAPISIAASGVPVVIAASFARIFYRNGINIG--LPLLEIGDD 107
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPI-GDLGPVIDAGGIFAYARKTG 242
E+ S GD + ++ A + N TTG + P+ G + + AGG+ Y R+ G
Sbjct: 108 VEKISAGDRLRVDTATGAIENLTTGDTFHAHPLPGFVQDIARAGGLLNYIRENG 161
>gi|20806560|ref|NP_621731.1| 3-isopropylmalate dehydratase small subunit [Thermoanaerobacter
tengcongensis MB4]
gi|23396645|sp|Q8RDK1.1|LEUD_THETN RecName: Full=3-isopropylmalate dehydratase small subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|20514999|gb|AAM23335.1| 3-isopropylmalate dehydratase small subunit [Thermoanaerobacter
tengcongensis MB4]
Length = 161
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/167 (37%), Positives = 95/167 (56%), Gaps = 21/167 (12%)
Query: 78 GDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYK---II 134
GDNIDTD IIPA +L S+P E L + + L + E K K K I+
Sbjct: 9 GDNIDTDVIIPARFLN--TSDPKE---LAEHCMEDL----------DREFKNKVKEGDIL 53
Query: 135 IAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEECS 194
+ G NFGCGSSREHAP+A+ A+G S ++A+S+ARIF+RN++ G P+ +
Sbjct: 54 VVGENFGCGSSREHAPLAIKASGISCIIAKSFARIFYRNAINIG--LPILESREAVDGIE 111
Query: 195 TGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
GD+V++++ + N T G E+K +P + + +I GG+ Y R+
Sbjct: 112 EGDIVSVDVDNGIIRNVTKGTEFKAQPFPEFIKEIIKYGGLINYVRE 158
>gi|126179891|ref|YP_001047856.1| 3-isopropylmalate dehydratase small subunit [Methanoculleus
marisnigri JR1]
gi|125862685|gb|ABN57874.1| 3-isopropylmalate dehydratase, small subunit [Methanoculleus
marisnigri JR1]
Length = 163
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/167 (41%), Positives = 98/167 (58%), Gaps = 20/167 (11%)
Query: 75 YVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY-KI 133
+ GD+IDTD IIP +LT+ +P E L +A G TR DE + + +
Sbjct: 4 WKFGDDIDTDAIIPGRFLTIY--DPGE---LAKHAFEG------TR--DEFAKEAREGDV 50
Query: 134 IIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEEC 193
++ G NFGCGSSREHAP+AL AG VVA+S+ARIF+RN+V TG + PL S E
Sbjct: 51 VVGGSNFGCGSSREHAPLALLGAGVKVVVAKSFARIFYRNAVNTG-LLPLVSAG--AESI 107
Query: 194 STGDVVTIEIAESRLINHTTGKEYKLKPI-GDLGPVIDAGGIFAYAR 239
GD VT+ +A + G+ ++P+ G + ++DAGG+ AYA+
Sbjct: 108 RDGDAVTVNLAGGYI--EANGRRLAVEPVPGFMKEIVDAGGLVAYAK 152
>gi|448608036|ref|ZP_21659875.1| 3-isopropylmalate dehydratase small subunit [Haloferax
sulfurifontis ATCC BAA-897]
gi|445737078|gb|ELZ88616.1| 3-isopropylmalate dehydratase small subunit [Haloferax
sulfurifontis ATCC BAA-897]
Length = 177
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/187 (35%), Positives = 104/187 (55%), Gaps = 22/187 (11%)
Query: 57 SADSRATKEPTATFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPAT 116
+AD P G +V GDN+DTDQI P+ ++ V S+PDE L S+A L
Sbjct: 4 AADGTGDGRPDPADPGRAWVFGDNVDTDQITPSRFI--VSSDPDE---LASHAFEDLRPE 58
Query: 117 YTTRFIDENETKTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVA 176
++ E+ ++AG NFG GSSREH+P++L AG SAVVA+S+ARIFFRN++
Sbjct: 59 FS-------ESVETGDFVVAGENFGSGSSREHSPLSLVGAGVSAVVAQSFARIFFRNAIN 111
Query: 177 TGEIYPLDSEARLC---EECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAG 232
G P+ +C + GD + +++ + NHT + Y+ + + + L +++ G
Sbjct: 112 LG--LPV----LICPGADAIEDGDEIHVDLDAGVVTNHTRDETYEAEALPEFLQSLVEQG 165
Query: 233 GIFAYAR 239
G+ AY +
Sbjct: 166 GLKAYTK 172
>gi|410671127|ref|YP_006923498.1| 3-isopropylmalate dehydratase small subunit [Methanolobus
psychrophilus R15]
gi|409170255|gb|AFV24130.1| 3-isopropylmalate dehydratase small subunit [Methanolobus
psychrophilus R15]
Length = 159
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/172 (36%), Positives = 96/172 (55%), Gaps = 16/172 (9%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
G + GD++DTD +IP YL L S ++L ++A G+ + + + E +
Sbjct: 1 MKGRVWKFGDDVDTDAVIPGRYLILNTS-----KELAAHAFEGVRPEFAKQ-VKEGD--- 51
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
II+AG NFGCGSSREHAP+AL S V+A+S+ARIFFRNS+ G E
Sbjct: 52 ---IIVAGNNFGCGSSREHAPIALKGTKISCVIAKSFARIFFRNSINIGVAL---LECPD 105
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
+ S GD + ++ A + N + ++Y+ P+ D + ++DAGG+ Y RK
Sbjct: 106 TDRISDGDELDVDFATGVITNVSRDEKYQATPLPDFVRGIMDAGGLIEYTRK 157
>gi|365873073|ref|ZP_09412606.1| 3-isopropylmalate dehydratase, small subunit [Thermanaerovibrio
velox DSM 12556]
gi|363983160|gb|EHM09367.1| 3-isopropylmalate dehydratase, small subunit [Thermanaerovibrio
velox DSM 12556]
Length = 171
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/174 (39%), Positives = 95/174 (54%), Gaps = 15/174 (8%)
Query: 67 TATFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENE 126
T G +V GD++DTD IIPA YLT +P E LG + + + E
Sbjct: 2 TRIIRGNAWVFGDHVDTDVIIPARYLTT--HDPVE---LGRHCMEDASPNFP------GE 50
Query: 127 TKTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSE 186
K + II+AG NFGCGSSREHAP+A+ G S V+A S+ARIF+RN++ G P+
Sbjct: 51 VK-RGDIIVAGENFGCGSSREHAPLAIMGCGISCVIAASFARIFYRNAINLG--LPILEI 107
Query: 187 ARLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPI-GDLGPVIDAGGIFAYAR 239
E S GD++++ + R+ N T G E K PI G ++ AGG+ Y +
Sbjct: 108 PDPLEFTSQGDLLSVNLDHGRVSNLTKGTERKFPPIRGMAEKIVSAGGLVNYVK 161
>gi|346312085|ref|ZP_08854079.1| 3-isopropylmalate dehydratase small subunit 1 [Collinsella tanakaei
YIT 12063]
gi|345899179|gb|EGX69030.1| 3-isopropylmalate dehydratase small subunit 1 [Collinsella tanakaei
YIT 12063]
Length = 173
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 94/171 (54%), Gaps = 15/171 (8%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
F G + G ++DTD IIPA YL N ++ L ++A+ + + T T
Sbjct: 3 FSGTVFRYGRDVDTDVIIPARYL-----NSSDHAHLAAHAMEDIDPAFAT-------TVK 50
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
II+A NFGCGSSREHAPVA+ AAG S V+A+S+ARIF+RN++ G P+
Sbjct: 51 PGDIIVADENFGCGSSREHAPVAIKAAGVSCVIAKSFARIFYRNAINVG--LPILECPAA 108
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYAR 239
+ + GD V ++ + ++N TG+ + +P + +I+AGG+ R
Sbjct: 109 VDAIAAGDTVDVDTEDGSIVNRRTGERFTAEPFPPFIAEIIEAGGLVERTR 159
>gi|331002370|ref|ZP_08325888.1| 3-isopropylmalate dehydratase small subunit [Lachnospiraceae oral
taxon 107 str. F0167]
gi|330410186|gb|EGG89620.1| 3-isopropylmalate dehydratase small subunit [Lachnospiraceae oral
taxon 107 str. F0167]
Length = 163
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 93/167 (55%), Gaps = 15/167 (8%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + G+N+DTD IIPA YL N E+L + + + + + K
Sbjct: 5 GHVFKYGENVDTDVIIPARYL-----NATTGEELAKHCMEDIDKDFVNKV-------QKG 52
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
II+A NFGCGSSREHAP+A+ ++G S V+A+++ARIF+RNS+ G P+ +
Sbjct: 53 DIIVARKNFGCGSSREHAPLAIKSSGVSVVIADTFARIFYRNSINIG--LPIIESPEAAK 110
Query: 192 ECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAY 237
E + GD V ++ + N TTGK YK + + + +I+AGG+ Y
Sbjct: 111 EINQGDEVKVDFDTGIITNITTGKSYKGQAFPEFMQNIINAGGLVNY 157
>gi|312135782|ref|YP_004003120.1| 3-isopropylmalate dehydratase, small subunit [Caldicellulosiruptor
owensensis OL]
gi|311775833|gb|ADQ05320.1| 3-isopropylmalate dehydratase, small subunit [Caldicellulosiruptor
owensensis OL]
Length = 166
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 92/171 (53%), Gaps = 15/171 (8%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
F G + DNIDTD IIPA YL S+P E L + L L + +
Sbjct: 3 FKGKAHKYYDNIDTDVIIPARYLN--TSDPAE---LAKHCLEDLDKEFVNKV-------K 50
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
K I++AG NFGCGSSREHAP+A+ A G S V+A+S+ARIF+RN++ G P+
Sbjct: 51 KGDILVAGKNFGCGSSREHAPIAIKACGVSCVIAKSFARIFYRNAINIG--LPIVECEEA 108
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYAR 239
+ GD V +++ + N T KE+ KP + + ++ AGG+ + +
Sbjct: 109 VDGIEAGDEVEVDLVNGVIKNITKNKEFNAKPFPEFMQNIMKAGGLIEFVK 159
>gi|167629601|ref|YP_001680100.1| 3-isopropylmalate dehydratase small subunit [Heliobacterium
modesticaldum Ice1]
gi|226736056|sp|B0TCR3.1|LEUD_HELMI RecName: Full=3-isopropylmalate dehydratase small subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|167592341|gb|ABZ84089.1| 3-isopropylmalate dehydratase, small subunit [Heliobacterium
modesticaldum Ice1]
Length = 166
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 89/171 (52%), Gaps = 15/171 (8%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
F G + G +IDTD IIPA YL N E+L + + ++ +
Sbjct: 3 FTGRVWKFGKDIDTDAIIPARYL-----NTTSPEELAKHCMEDADPSFPQKV-------R 50
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
K II+A NFGCGSSREHAP+A+ AAG V+A+S+ARIFFRN++ G P+
Sbjct: 51 KGDIIVADKNFGCGSSREHAPIAIKAAGVPCVIAKSFARIFFRNAINIG--LPIFECPEA 108
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPI-GDLGPVIDAGGIFAYAR 239
+ GDVV + + N TTG+ Y K + + +I AGG+ Y +
Sbjct: 109 VDGIREGDVVQVNADRGVIFNMTTGQTYTAKALPASMQSIIQAGGLMQYVK 159
>gi|224541782|ref|ZP_03682321.1| hypothetical protein CATMIT_00954 [Catenibacterium mitsuokai DSM
15897]
gi|224525309|gb|EEF94414.1| 3-isopropylmalate dehydratase, small subunit [Catenibacterium
mitsuokai DSM 15897]
Length = 163
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/167 (37%), Positives = 92/167 (55%), Gaps = 15/167 (8%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + GDN+DTD IIPA YL N + ++L S+A++ L T+ R
Sbjct: 5 GRVFKYGDNVDTDVIIPARYL-----NSFDAKELASHAMVDLDPTFVERV-------QPG 52
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
II+A NFGCGSSREHAP+AL AG S V+A+S+ARIF+RNS+ G + + +
Sbjct: 53 DIIVAKKNFGCGSSREHAPLALKTAGVSCVIAKSFARIFYRNSINIG--FAILECPEAVD 110
Query: 192 ECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAY 237
GD V ++ ++ N T EY+ +P + +I+ GG+ Y
Sbjct: 111 GIDDGDEVKVDYETGKIYNLTKNTEYQGQPFPPFMQKIIEQGGLVNY 157
>gi|237752192|ref|ZP_04582672.1| 3-isopropylmalate dehydratase small subunit [Helicobacter
winghamensis ATCC BAA-430]
gi|229376434|gb|EEO26525.1| 3-isopropylmalate dehydratase small subunit [Helicobacter
winghamensis ATCC BAA-430]
Length = 170
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/172 (39%), Positives = 96/172 (55%), Gaps = 26/172 (15%)
Query: 75 YVVGDNIDTDQIIPAEYLT-----LVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
+ GDNIDTD II A YL ++ S+ E + G LI T
Sbjct: 10 WKFGDNIDTDLIIAARYLNTTDSAILASHLMEDARNGFVNLI-----------------T 52
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
K II+AG NFGCGSSREHAPVA+ AAG SAV+A+SYARIF+RN+ TG P+ E +
Sbjct: 53 KGDIIVAGENFGCGSSREHAPVAIKAAGISAVIAKSYARIFYRNAFNTG--LPI-LEIQE 109
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
+ + GD++ I++ + NHT +Y I + ++++GG+ YA+
Sbjct: 110 ADSINEGDILEIDLKGGVIKNHTQNCDYAFNAIPPFMLELLESGGLIPYAKN 161
>gi|121534905|ref|ZP_01666724.1| 3-isopropylmalate dehydratase, small subunit [Thermosinus
carboxydivorans Nor1]
gi|121306504|gb|EAX47427.1| 3-isopropylmalate dehydratase, small subunit [Thermosinus
carboxydivorans Nor1]
Length = 167
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/167 (38%), Positives = 91/167 (54%), Gaps = 15/167 (8%)
Query: 69 TFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETK 128
T G +V G NIDTDQI P YL L ++P E +G +A+ G + F
Sbjct: 4 TIRGRAFVYGANIDTDQIYPGRYLDL--TDP---EDVGKHAMEGADPNFVKEF------- 51
Query: 129 TKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEAR 188
II+A NFGCGSSREHA V L A G ++A+S+ RIF+RN++ G P+
Sbjct: 52 QPGDIIVASTNFGCGSSREHAVVTLKAVGVGCILADSFGRIFYRNAINLG--IPVLVCPN 109
Query: 189 LCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGI 234
+ GDV+T+ IA ++N TTG K +P+ D + ++ +GGI
Sbjct: 110 ISAMVKKGDVLTVNIATGEVVNETTGATAKAQPLSDYIMNILASGGI 156
>gi|289577281|ref|YP_003475908.1| 3-isopropylmalate dehydratase, small subunit [Thermoanaerobacter
italicus Ab9]
gi|297543530|ref|YP_003675832.1| 3-isopropylmalate dehydratase, small subunit [Thermoanaerobacter
mathranii subsp. mathranii str. A3]
gi|289526994|gb|ADD01346.1| 3-isopropylmalate dehydratase, small subunit [Thermoanaerobacter
italicus Ab9]
gi|296841305|gb|ADH59821.1| 3-isopropylmalate dehydratase, small subunit [Thermoanaerobacter
mathranii subsp. mathranii str. A3]
Length = 160
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/164 (37%), Positives = 93/164 (56%), Gaps = 15/164 (9%)
Query: 78 GDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKIIIAG 137
GDNIDTD IIPA +L S+P E L + + L + + + E + I++ G
Sbjct: 9 GDNIDTDVIIPARFLN--TSDPQE---LAQHCMEDLDKDFKNK-VKEGD------ILVVG 56
Query: 138 GNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEECSTGD 197
NFGCGSSREHAP+A+ A+G S ++A+S+ARIFFRN++ G P+ + GD
Sbjct: 57 ENFGCGSSREHAPIAIKASGISCIIAKSFARIFFRNAINIG--LPILECKEAVDGIEEGD 114
Query: 198 VVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
+V ++ + N T G E+K +P + + ++ GG+ Y RK
Sbjct: 115 MVLVDTDNGIIKNLTKGTEFKAQPFPEFIKEIMKYGGLINYVRK 158
>gi|338730293|ref|YP_004659685.1| 3-isopropylmalate dehydratase, small subunit [Thermotoga thermarum
DSM 5069]
gi|335364644|gb|AEH50589.1| 3-isopropylmalate dehydratase, small subunit [Thermotoga thermarum
DSM 5069]
Length = 168
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/179 (38%), Positives = 101/179 (56%), Gaps = 19/179 (10%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
+ G GDNIDTD IIPA YL ++P E L + + L + + K
Sbjct: 4 YEGKTLKYGDNIDTDVIIPARYLN--TTDPTE---LARHCMEDLDPDF--------KVKV 50
Query: 130 KYK-IIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEAR 188
K K I++ G NFGCGSSREHAP+A+ A+G ++A+S+ARIF+RN++ G EA
Sbjct: 51 KEKTILVVGENFGCGSSREHAPIAIKASGVKCIIAKSFARIFYRNAINIGLAIVELPEA- 109
Query: 189 LCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDL-GPVIDAGGI--FAYARKTGMI 244
E+ + GD V ++++ + N TTG+ +K+KP L +I GG+ FA A+ G I
Sbjct: 110 -VEKINEGDWVKVDLSNGLVENATTGEVFKIKPFPLLIQEIIKRGGLLNFAMAKARGEI 167
>gi|399888001|ref|ZP_10773878.1| 3-isopropylmalate dehydratase small subunit [Clostridium arbusti
SL206]
Length = 164
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/141 (42%), Positives = 80/141 (56%), Gaps = 14/141 (9%)
Query: 78 GDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKIIIAG 137
GDN+DTD IIPA YL S+P E L S+ + L + R K I++A
Sbjct: 11 GDNVDTDVIIPARYLN--SSDPKE---LASHCMEDLDVNFLERL-------NKGDIVVAD 58
Query: 138 GNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEECSTGD 197
NFGCGSSREHAP+AL AAG S V+A+S+ARIF+RNS+ G +P+ + G
Sbjct: 59 KNFGCGSSREHAPIALKAAGVSCVIAKSFARIFYRNSINIG--FPILECDEAVNDAKDGH 116
Query: 198 VVTIEIAESRLINHTTGKEYK 218
+ ++ + N T GKEYK
Sbjct: 117 ELEVDFKAGVIKNITLGKEYK 137
>gi|304437459|ref|ZP_07397417.1| 3-isopropylmalate dehydratase small subunit [Selenomonas sp. oral
taxon 149 str. 67H29BP]
gi|304369509|gb|EFM23176.1| 3-isopropylmalate dehydratase small subunit [Selenomonas sp. oral
taxon 149 str. 67H29BP]
Length = 167
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 93/174 (53%), Gaps = 15/174 (8%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
F G + GDNIDTD IIPA YL N E + L ++ + + T+ + +
Sbjct: 2 FEGKVWRYGDNIDTDVIIPARYL-----NTFEPKALAAHCMEDIDTTFAS-------SVQ 49
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
+ I++ G NFGCGSSREHAP+A+ A+G V+A S+ARIF+RN + G PL
Sbjct: 50 QGDIMVGGKNFGCGSSREHAPIAIAASGIPVVIAASFARIFYRNGINIG--LPLLEIGDD 107
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPI-GDLGPVIDAGGIFAYARKTG 242
E+ GD + ++ + N TTG + P+ G + + AGG+ Y R+ G
Sbjct: 108 VEKIRAGDRLRVDTETGTIENLTTGDTFHAHPLPGFVQDIARAGGLLNYIRENG 161
>gi|386393258|ref|ZP_10078039.1| 3-isopropylmalate dehydratase, small subunit [Desulfovibrio sp.
U5L]
gi|385734136|gb|EIG54334.1| 3-isopropylmalate dehydratase, small subunit [Desulfovibrio sp.
U5L]
Length = 168
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/174 (37%), Positives = 98/174 (56%), Gaps = 19/174 (10%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
+HG + VG +IDTD IIPA++L + +LG+ + GL + R
Sbjct: 5 YHGKAHKVGAHIDTDAIIPAKFLVTT-----DTAELGANCMEGLEPGWIKRV-------E 52
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPL--DSEA 187
K I++AG NFGCGSSREHAP+AL AG V+A S+ARIF+RNS G + D A
Sbjct: 53 KGDIMVAGENFGCGSSREHAPLALLGAGIPVVIAHSFARIFYRNSFNMGLVLLEIGDDVA 112
Query: 188 RLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
++ S GD +T++ + N TTG + + KP+ + ++DAGG+ Y ++
Sbjct: 113 KI----SDGDELTVDADTGVIENVTTGAKIQCKPVPPFMQSILDAGGLVPYVKE 162
>gi|431793600|ref|YP_007220505.1| 3-isopropylmalate dehydratase small subunit [Desulfitobacterium
dichloroeliminans LMG P-21439]
gi|430783826|gb|AGA69109.1| 3-isopropylmalate dehydratase, small subunit [Desulfitobacterium
dichloroeliminans LMG P-21439]
Length = 162
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 91/167 (54%), Gaps = 15/167 (8%)
Query: 74 CYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKI 133
+ GD+IDTD IIPA ++ N E L ++ + + E + +
Sbjct: 4 AWKFGDDIDTDAIIPARHM-----NQFSPEHLAAHCMEDADVNFA------KEVRIG-DV 51
Query: 134 IIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEEC 193
I+ G NFGCGSSREHAPVA+ AAG AV+AESYARIF+RNS+ G P+ +
Sbjct: 52 IVGGKNFGCGSSREHAPVAIKAAGVKAVIAESYARIFYRNSLNIG--MPILESPEAVQGI 109
Query: 194 STGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYAR 239
TGD V++++ ++IN T E++ +P + +I GG+ Y +
Sbjct: 110 ETGDEVSVDLESGKIINLTKNTEFEARPFPPFMQDLIKTGGLIPYVK 156
>gi|303248992|ref|ZP_07335237.1| 3-isopropylmalate dehydratase, small subunit [Desulfovibrio
fructosovorans JJ]
gi|302489578|gb|EFL49518.1| 3-isopropylmalate dehydratase, small subunit [Desulfovibrio
fructosovorans JJ]
Length = 165
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/175 (38%), Positives = 97/175 (55%), Gaps = 19/175 (10%)
Query: 69 TFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETK 128
+HG + VG +IDTD IIPA +L + +LG+ + GL + R
Sbjct: 1 MYHGKAHKVGAHIDTDAIIPARFLVTT-----DTAELGANCMEGLEPGWIKRV------- 48
Query: 129 TKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPL--DSE 186
K I++AG NFGCGSSREHAPVA+ AG V+A S+ARIF+RNS G I D
Sbjct: 49 EKGDIMVAGENFGCGSSREHAPVAILGAGIPVVIAHSFARIFYRNSFNMGLILLEIGDDV 108
Query: 187 ARLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
AR+ S GD + ++ + N TTG++ + KP+ + ++DAGG+ Y ++
Sbjct: 109 ARI----SDGDELKVDADTGVIENLTTGEKIQCKPVPPFMKGILDAGGLVPYVKE 159
>gi|291541824|emb|CBL14934.1| 3-isopropylmalate dehydratase, small subunit [Ruminococcus bromii
L2-63]
Length = 159
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 96/166 (57%), Gaps = 17/166 (10%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + GDN+DTD IIPA YL N +++L ++ + + A + + + E +
Sbjct: 5 GTVHKFGDNVDTDVIIPARYL-----NTASHKELAAHCMEDIDADFVNK-VKEGD----- 53
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG-EIYPLDSEARLC 190
I++A NFGCGSSREHAP+A+ A+G S V+A ++ARIF+RNS+ G I D A+
Sbjct: 54 -IMVAEKNFGCGSSREHAPIAIKASGISCVIASTFARIFYRNSINIGLPILECDEAAKDI 112
Query: 191 EECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIF 235
+E GD V++ + N TTGK Y+ +P + + +I GG+
Sbjct: 113 KE---GDTVSVNFDTGVITNETTGKTYQAEPFPEFIQNIIKKGGLI 155
>gi|392426485|ref|YP_006467479.1| 3-isopropylmalate dehydratase, small subunit [Desulfosporosinus
acidiphilus SJ4]
gi|391356448|gb|AFM42147.1| 3-isopropylmalate dehydratase, small subunit [Desulfosporosinus
acidiphilus SJ4]
Length = 162
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/169 (37%), Positives = 92/169 (54%), Gaps = 15/169 (8%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + G +IDTD IIPA YL N E L + + T+F +E +
Sbjct: 2 GKAWKFGHDIDTDVIIPARYL-----NQSTPEHLAVHCM----EDAGTKFAEEVSSG--- 49
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
I++ G NFGCGSSREHAP+A+ A G V+AES+ARIF+RNS+ G P+
Sbjct: 50 DIMVGGKNFGCGSSREHAPIAIKACGIKVVIAESFARIFYRNSLNIG--LPILECPEAVA 107
Query: 192 ECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYAR 239
S GD + +++ ++IN TTG E++ +P + +I AGG+ Y R
Sbjct: 108 GISQGDDLDVDLTTGKIINKTTGSEFQARPFPPFMQELIRAGGLIPYVR 156
>gi|229828852|ref|ZP_04454921.1| hypothetical protein GCWU000342_00937 [Shuttleworthia satelles DSM
14600]
gi|229792015|gb|EEP28129.1| hypothetical protein GCWU000342_00937 [Shuttleworthia satelles DSM
14600]
Length = 163
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/170 (37%), Positives = 93/170 (54%), Gaps = 19/170 (11%)
Query: 71 HGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTK 130
HG + GDN+DTD IIPA YL S+P + L + + + + +R +D +
Sbjct: 5 HGKVFKYGDNVDTDVIIPARYLN--SSDPAD---LARHCMEDIDRDFVSR-VDTGD---- 54
Query: 131 YKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLC 190
II+A NFGCGSSREHAP+A+ AAG S V+AE++ARIF+RN++ G P+
Sbjct: 55 --IIVAEKNFGCGSSREHAPIAIKAAGVSCVIAETFARIFYRNAINIG--LPIVECKEAA 110
Query: 191 EECSTGDVVTIEIAESRLINHTTGKEYK---LKPIGDLGPVIDAGGIFAY 237
+ GD V ++ + NHT K Y+ P + +IDA G+ Y
Sbjct: 111 ADIEAGDEVEVDFDSGLITNHTRKKTYQGQAFPPF--MQKIIDAEGLVNY 158
>gi|260887163|ref|ZP_05898426.1| 3-isopropylmalate dehydratase, small subunit [Selenomonas sputigena
ATCC 35185]
gi|330839067|ref|YP_004413647.1| 3-isopropylmalate dehydratase, small subunit [Selenomonas sputigena
ATCC 35185]
gi|402834206|ref|ZP_10882810.1| putative 3-isopropylmalate dehydratase, small subunit [Selenomonas
sp. CM52]
gi|260863225|gb|EEX77725.1| 3-isopropylmalate dehydratase, small subunit [Selenomonas sputigena
ATCC 35185]
gi|329746831|gb|AEC00188.1| 3-isopropylmalate dehydratase, small subunit [Selenomonas sputigena
ATCC 35185]
gi|402278785|gb|EJU27840.1| putative 3-isopropylmalate dehydratase, small subunit [Selenomonas
sp. CM52]
Length = 164
Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 96/177 (54%), Gaps = 15/177 (8%)
Query: 69 TFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETK 128
+ G + GDNIDTD IIPA YL N + ++L + ++ + ++
Sbjct: 2 SLQGKVWRYGDNIDTDVIIPARYL-----NSFDPKELAEHCMVDIDESFAKNV------- 49
Query: 129 TKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEAR 188
+ I++ G NFGCGSSREHAPVA+ A+G ++A +ARIF+RN + G PL
Sbjct: 50 QEGDIMVGGKNFGCGSSREHAPVAIKASGIPVIIAADFARIFYRNGINIG--LPLLEIGD 107
Query: 189 LCEECSTGDVVTIEIAESRLINHTTGKEYKLKPI-GDLGPVIDAGGIFAYARKTGMI 244
E+ S GD + ++ ++ N TTG ++ P+ G + + +AGG+ Y ++ G +
Sbjct: 108 DVEKISAGDELRVDTETGKIENLTTGDVFQAHPLPGFVQEIAEAGGLINYIKEKGAL 164
>gi|390559048|ref|ZP_10243419.1| 3-isopropylmalate dehydratase small subunit 1 [Nitrolancetus
hollandicus Lb]
gi|390174376|emb|CCF82711.1| 3-isopropylmalate dehydratase small subunit 1 [Nitrolancetus
hollandicus Lb]
Length = 169
Score = 103 bits (258), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 67/170 (39%), Positives = 94/170 (55%), Gaps = 21/170 (12%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
+G + GD+IDTD IIPA YL + +P E AT+ ID E
Sbjct: 3 INGKVWKFGDDIDTDVIIPARYLVTI--DPAEL------------ATHCMEDIDP-EFAG 47
Query: 130 KYK---IIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSE 186
K + +I+AG NFGCGSSREHAP+++ AAG AVVAES+ARIF+RN++ G P+
Sbjct: 48 KVQPGDVIVAGKNFGCGSSREHAPISIKAAGVRAVVAESFARIFYRNAINIG--LPVIEA 105
Query: 187 ARLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIF 235
+ +E TGD++ I+ + + N TG Y P + +I AGG+
Sbjct: 106 PQAAQEAETGDLLEIDTDKGNVHNTRTGNTYPSTPYDAYVMEIIQAGGLM 155
>gi|227872470|ref|ZP_03990810.1| 3-isopropylmalate dehydratase [Oribacterium sinus F0268]
gi|227841671|gb|EEJ51961.1| 3-isopropylmalate dehydratase [Oribacterium sinus F0268]
Length = 170
Score = 103 bits (258), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 65/168 (38%), Positives = 93/168 (55%), Gaps = 19/168 (11%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G C GDN+DTD IIPA YL + D+ E L ++A+ + + + K
Sbjct: 6 GHCVKYGDNVDTDVIIPARYLAI----QDKAE-LATHAMEDIDQHFHDKI-------KKG 53
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
++IAG NFGCGSSREHAP L +G S V+AES+ARIFFRN++ G EA +
Sbjct: 54 DLLIAGKNFGCGSSREHAPQVLKDSGISCVIAESFARIFFRNALNIGLAIVEAPEA--AK 111
Query: 192 ECSTGDVVTIEIAESRLINHTTGKEYKLK---PIGDLGPVIDAGGIFA 236
E G+ + ++ E ++ N ++GK Y + P L +ID GG+ A
Sbjct: 112 EIQEGEELEVDFTEGKIHNLSSGKSYTMAVFPPF--LQEMIDKGGLIA 157
>gi|399577674|ref|ZP_10771426.1| 3-isopropylmalate dehydratase small subunit [Halogranum salarium
B-1]
gi|399237116|gb|EJN58048.1| 3-isopropylmalate dehydratase small subunit [Halogranum salarium
B-1]
Length = 166
Score = 103 bits (258), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 64/172 (37%), Positives = 102/172 (59%), Gaps = 22/172 (12%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G ++ GDNIDTDQI P+ ++ V S+PDE L ++A L ++ E +T
Sbjct: 8 GRAWLFGDNIDTDQITPSRFI--VSSDPDE---LATHAFEDLRPEFS------GEVETG- 55
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLC- 190
++AG NFG GSSREH+P++L AG S V+A+S+ARIFFRN++ G P+ +C
Sbjct: 56 DFVVAGENFGSGSSREHSPLSLVGAGVSGVIAQSFARIFFRNAINLG--LPV----LICP 109
Query: 191 --EECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYAR 239
+ GD V+++I + NHT G++Y + + + L +++ GG+ AY +
Sbjct: 110 GADAIDDGDEVSMDIDAGIVHNHTKGEQYDAEALPEFLQTLVEQGGLKAYTK 161
>gi|357040898|ref|ZP_09102681.1| 3-isopropylmalate dehydratase small subunit [Desulfotomaculum
gibsoniae DSM 7213]
gi|355355992|gb|EHG03790.1| 3-isopropylmalate dehydratase small subunit [Desulfotomaculum
gibsoniae DSM 7213]
Length = 168
Score = 103 bits (258), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 64/169 (37%), Positives = 90/169 (53%), Gaps = 15/169 (8%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
G + G ++DTD IIPA YL S+P E L + + + T+
Sbjct: 3 LQGKTWKFGADVDTDAIIPARYLNT--SDPAE---LAKHCMEDADPAFPTKV-------Q 50
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
IIIAG NFGCGSSREHAP+A+ AAG S V+A+S+ARIF+RN+ G P+
Sbjct: 51 PGDIIIAGKNFGCGSSREHAPIAIKAAGVSCVIAKSFARIFYRNAFNIG--LPIFESVEA 108
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAY 237
E GD V ++ A+ + N T + YK P+ + + +I AGG+ Y
Sbjct: 109 AEAIQEGDEVAVDSAQGVIKNLTKNETYKATPVPEFMQQIIAAGGLIGY 157
>gi|397779481|ref|YP_006543954.1| 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit
[Methanoculleus bourgensis MS2]
gi|396937983|emb|CCJ35238.1| 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit
[Methanoculleus bourgensis MS2]
Length = 163
Score = 103 bits (258), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/169 (40%), Positives = 99/169 (58%), Gaps = 24/169 (14%)
Query: 75 YVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKII 134
+ G++IDTD +IP +LT+ +P E L +A G + R + E + ++
Sbjct: 4 WKFGNDIDTDAVIPGRFLTIY--DPAE---LAKHAFEGTRDEFA-REVREGD------VV 51
Query: 135 IAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE--- 191
+AG NFGCGSSREHAP+AL AG VVAES+ARIF+RN+V TG + PL +C
Sbjct: 52 VAGSNFGCGSSREHAPLALLGAGIRVVVAESFARIFYRNAVNTG-LLPL-----VCAGAG 105
Query: 192 ECSTGDVVTIEIAESRLINHTTGKEYKLKPI-GDLGPVIDAGGIFAYAR 239
E GD VT+++ + GK ++P+ G L ++DAGG+ AYA+
Sbjct: 106 EIRDGDTVTVDLGGGFI--EVNGKRLAVEPVPGFLKSIVDAGGLVAYAK 152
>gi|296449711|ref|ZP_06891481.1| 3-isopropylmalate dehydratase small subunit [Clostridium difficile
NAP08]
gi|296877972|ref|ZP_06901991.1| 3-isopropylmalate dehydratase small subunit [Clostridium difficile
NAP07]
gi|296261435|gb|EFH08260.1| 3-isopropylmalate dehydratase small subunit [Clostridium difficile
NAP08]
gi|296431040|gb|EFH16868.1| 3-isopropylmalate dehydratase small subunit [Clostridium difficile
NAP07]
Length = 168
Score = 103 bits (258), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 59/152 (38%), Positives = 87/152 (57%), Gaps = 16/152 (10%)
Query: 71 HGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTK 130
+G + GDNIDTD IIPA YL + +Y++L ++ + + + ++ K
Sbjct: 9 NGSVFKFGDNIDTDVIIPARYLNIA-----DYKELATHCMEDIDDKFISKV-------KK 56
Query: 131 YKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG-EIYPLDSEARL 189
II+A NFGCGSSREHAP+ + +G S V+A ++ARIFFRNS+ G I + A
Sbjct: 57 GDIIVATKNFGCGSSREHAPIVIKESGVSCVIASTFARIFFRNSINIGLPILECEEAANN 116
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKP 221
EE GD + ++ + + N T GKEYK +P
Sbjct: 117 IEE---GDKIEVDFSTGVIKNITKGKEYKAEP 145
>gi|294496602|ref|YP_003543095.1| 3-isopropylmalate dehydratase, small subunit [Methanohalophilus
mahii DSM 5219]
gi|292667601|gb|ADE37450.1| 3-isopropylmalate dehydratase, small subunit [Methanohalophilus
mahii DSM 5219]
Length = 160
Score = 103 bits (258), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 61/172 (35%), Positives = 97/172 (56%), Gaps = 16/172 (9%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
G + GD++DTD +IP +L L + P+E L ++A G+ + E+
Sbjct: 1 MEGKVWKFGDDVDTDAVIPGRFLVL--NTPEE---LAAHAFEGVRPDFA-------ESVK 48
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
+ II+AG NFGCGSSREHAP+AL V+A+S+ARIFFRN++ G PL E
Sbjct: 49 ENDIIVAGSNFGCGSSREHAPLALKGTKIGCVIAKSFARIFFRNAINIG--VPL-LECAD 105
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
+ D + ++I+ + N + G++Y+ P+ D + +++AGG+ Y RK
Sbjct: 106 TDSIDENDKLKVDISTGVIENLSKGEKYQATPLPDFVREIVNAGGLIEYTRK 157
>gi|255654963|ref|ZP_05400372.1| 3-isopropylmalate dehydratase small subunit [Clostridium difficile
QCD-23m63]
Length = 163
Score = 103 bits (258), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 59/152 (38%), Positives = 87/152 (57%), Gaps = 16/152 (10%)
Query: 71 HGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTK 130
+G + GDNIDTD IIPA YL + +Y++L ++ + + + ++ K
Sbjct: 4 NGSVFKFGDNIDTDVIIPARYLNIA-----DYKELATHCMEDIDDKFISKV-------KK 51
Query: 131 YKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG-EIYPLDSEARL 189
II+A NFGCGSSREHAP+ + +G S V+A ++ARIFFRNS+ G I + A
Sbjct: 52 GDIIVATKNFGCGSSREHAPIVIKESGVSCVIASTFARIFFRNSINIGLPILECEEAANN 111
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKP 221
EE GD + ++ + + N T GKEYK +P
Sbjct: 112 IEE---GDKIEVDFSTGVIKNITKGKEYKAEP 140
>gi|448563699|ref|ZP_21635626.1| 3-isopropylmalate dehydratase small subunit [Haloferax prahovense
DSM 18310]
gi|445717638|gb|ELZ69352.1| 3-isopropylmalate dehydratase small subunit [Haloferax prahovense
DSM 18310]
Length = 176
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 63/169 (37%), Positives = 100/169 (59%), Gaps = 16/169 (9%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G +V GDNIDTDQI P+ ++ V S+PDE L ++A L ++ E+
Sbjct: 18 GRAWVFGDNIDTDQITPSRFI--VSSDPDE---LATHAFEDLRPEFS-------ESVEPG 65
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
++AG NFG GSSREH+P++L AG SAVVA+S+ARIFFRN++ G + A + E
Sbjct: 66 DFVVAGENFGSGSSREHSPLSLVGAGVSAVVAQSFARIFFRNAINLGLPVLICPGADVIE 125
Query: 192 ECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYAR 239
+ GD + +++ + NHT + Y+ + + + L +++ GG+ AY +
Sbjct: 126 D---GDEIHVDLDAGVVTNHTRDETYEAEALPEFLQSLVEQGGLKAYTK 171
>gi|312136433|ref|YP_004003770.1| 3-isopropylmalate dehydratase small subunit [Methanothermus
fervidus DSM 2088]
gi|311224152|gb|ADP77008.1| 3-isopropylmalate dehydratase, small subunit [Methanothermus
fervidus DSM 2088]
Length = 162
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 69/171 (40%), Positives = 93/171 (54%), Gaps = 18/171 (10%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + GDNIDTD IIP YL N DE L S+A+ + + + K
Sbjct: 5 GKVWKFGDNIDTDTIIPGRYLRTF--NLDE---LASHAMEPIRPEFPKKV-------KKG 52
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
II+AG NFGCGSSRE A L G SA+VA+S+ARIFFRNS+ G + + S
Sbjct: 53 DIIVAGNNFGCGSSREQAAKVLKHLGISAIVAKSFARIFFRNSINIG-LPAIISNV---- 107
Query: 192 ECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARKT 241
S GD++ I++ E + N TTGK +K KP + ++ AGGI Y ++
Sbjct: 108 NASDGDLLEIKLEEGIIHNVTTGKVFKAKPYNKFILDILKAGGIIQYLKRN 158
>gi|126698575|ref|YP_001087472.1| 3-isopropylmalate dehydratase small subunit [Clostridium difficile
630]
gi|255100026|ref|ZP_05329003.1| 3-isopropylmalate dehydratase small subunit [Clostridium difficile
QCD-63q42]
gi|255305913|ref|ZP_05350085.1| 3-isopropylmalate dehydratase small subunit [Clostridium difficile
ATCC 43255]
gi|423090242|ref|ZP_17078550.1| 3-isopropylmalate dehydratase, small subunit [Clostridium difficile
70-100-2010]
gi|123067010|sp|Q18AJ1.1|LEUD_CLOD6 RecName: Full=3-isopropylmalate dehydratase small subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|115250012|emb|CAJ67832.1| 3-isopropylmalate dehydratase small subunit [Clostridium difficile
630]
gi|357556917|gb|EHJ38488.1| 3-isopropylmalate dehydratase, small subunit [Clostridium difficile
70-100-2010]
Length = 163
Score = 103 bits (257), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 56/151 (37%), Positives = 84/151 (55%), Gaps = 14/151 (9%)
Query: 71 HGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTK 130
+G + GDNIDTD IIPA YL + +Y++L ++ + + + ++ K
Sbjct: 4 NGSVFKFGDNIDTDVIIPARYLNIA-----DYKELATHCMEDIDDKFISKV-------KK 51
Query: 131 YKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLC 190
II+A NFGCGSSREHAP+ + +G S V+A ++ARIFFRNS+ G P+
Sbjct: 52 GDIIVATKNFGCGSSREHAPIVIKESGVSCVIASTFARIFFRNSINIG--LPILECEEAA 109
Query: 191 EECSTGDVVTIEIAESRLINHTTGKEYKLKP 221
GD + ++ + + N T GKEYK +P
Sbjct: 110 NNIDEGDNIEVDFSTGVIKNITKGKEYKAEP 140
>gi|197303130|ref|ZP_03168175.1| hypothetical protein RUMLAC_01854 [Ruminococcus lactaris ATCC
29176]
gi|197297785|gb|EDY32340.1| 3-isopropylmalate dehydratase, small subunit [Ruminococcus lactaris
ATCC 29176]
Length = 165
Score = 103 bits (257), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 59/167 (35%), Positives = 92/167 (55%), Gaps = 15/167 (8%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + GDN+DTD IIPA YL N + ++L S+A++ + + K
Sbjct: 6 GHVFKYGDNVDTDVIIPARYL-----NSFDAQELASHAMVDIDPDFVKNV-------KKG 53
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
+I+A NFGCGSSREHAP+ L AG S ++AE++ARIF+RN++ G P+ +
Sbjct: 54 DLIVANKNFGCGSSREHAPLCLKTAGVSCIIAETFARIFYRNAINIG--LPIIECPEAAK 111
Query: 192 ECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAY 237
E GD V ++ ++ + T G EY+ + + + +I AGG+ Y
Sbjct: 112 EIEAGDEVEVDFDSGKIYDRTKGTEYQGQAFPEFMQKLIAAGGLVNY 158
>gi|408381000|ref|ZP_11178550.1| 3-isopropylmalate dehydratase small subunit [Methanobacterium
formicicum DSM 3637]
gi|407816265|gb|EKF86827.1| 3-isopropylmalate dehydratase small subunit [Methanobacterium
formicicum DSM 3637]
Length = 169
Score = 103 bits (257), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 64/173 (36%), Positives = 95/173 (54%), Gaps = 17/173 (9%)
Query: 69 TFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETK 128
G + D++DTD I+P YL L ++L S + G ++ +
Sbjct: 4 VLKGKVWKFPDDVDTDIIVPGRYLVLTGE-----KELASCVMEGYDPEFSQKV------- 51
Query: 129 TKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEAR 188
K II+AG NFGCGSSREHAP+A+ AG SAVVAES+ARIF+RNS G L EA+
Sbjct: 52 GKGDIIVAGKNFGCGSSREHAPIAIKGAGISAVVAESFARIFYRNSTNIG---LLLIEAK 108
Query: 189 -LCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYAR 239
+ GD + I+I + L + T KE+++ + D + +++ GG+ +Y R
Sbjct: 109 GISRNIEEGDEIQIDIDKGVLKDLTNSKEFQITALPDFMMGIMNEGGLISYLR 161
>gi|218778040|ref|YP_002429358.1| 3-isopropylmalate dehydratase small subunit [Desulfatibacillum
alkenivorans AK-01]
gi|218759424|gb|ACL01890.1| 3-isopropylmalate dehydratase, small subunit [Desulfatibacillum
alkenivorans AK-01]
Length = 166
Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 63/167 (37%), Positives = 97/167 (58%), Gaps = 16/167 (9%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + GD++DTD II A YLT S+PDE L + + + + K
Sbjct: 6 GKVWTFGDDVDTDLIIAARYLTT--SDPDE---LAKHCMEDADPAFAGKV-------GKG 53
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
I++AG NFGCGSSREHAP+++ AAG + V+A+S+ARIF+RN+ TG +EA E
Sbjct: 54 DIMVAGKNFGCGSSREHAPISIKAAGVTCVIAKSFARIFYRNAFNTGLPILECAEADAIE 113
Query: 192 ECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAY 237
+ G V+T++ + + +TGK Y+ KPI + ++D+GG+ +
Sbjct: 114 D---GAVLTVDFDNGVITDESTGKTYQTKPIPPFMQELLDSGGLMEH 157
>gi|261367546|ref|ZP_05980429.1| 3-isopropylmalate dehydratase, small subunit [Subdoligranulum
variabile DSM 15176]
gi|282570329|gb|EFB75864.1| 3-isopropylmalate dehydratase, small subunit [Subdoligranulum
variabile DSM 15176]
Length = 159
Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 60/150 (40%), Positives = 84/150 (56%), Gaps = 14/150 (9%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + GDNIDTD IIPA YL N +L S+ + + T+ TR
Sbjct: 5 GPVFKYGDNIDTDVIIPARYL-----NTQSAAELASHCMEDIDKTFVTRV-------KPG 52
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
I++ G NFGCGSSREHAP+A+ AAG S V+A+S+ARIF+RN++ G P+ E
Sbjct: 53 DIMVGGENFGCGSSREHAPLAIKAAGISCVIAKSFARIFYRNAINIG--LPILECPAASE 110
Query: 192 ECSTGDVVTIEIAESRLINHTTGKEYKLKP 221
S GD V+I+ + + TTG+ ++ P
Sbjct: 111 AISEGDTVSIDFDTGVITDETTGQTFQAAP 140
>gi|373455346|ref|ZP_09547182.1| 3-isopropylmalate dehydratase, small subunit [Dialister
succinatiphilus YIT 11850]
gi|371934986|gb|EHO62759.1| 3-isopropylmalate dehydratase, small subunit [Dialister
succinatiphilus YIT 11850]
Length = 163
Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 94/175 (53%), Gaps = 15/175 (8%)
Query: 67 TATFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENE 126
A G + GDNIDTD IIPA YL N + ++L + ++ + + +
Sbjct: 1 MAVLEGKVWRYGDNIDTDVIIPARYL-----NTFDPKELAKHCMVDIDKDFAQKV----- 50
Query: 127 TKTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSE 186
I++ G NFGCGSSREHAPVA+ A G ++A S+ARIF+RN + G PL
Sbjct: 51 --KAGDIMVGGKNFGCGSSREHAPVAIKACGVPVIIAASFARIFYRNGINVG--LPLMEI 106
Query: 187 ARLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPI-GDLGPVIDAGGIFAYARK 240
E GD ++++++ ++ + TTG+ ++ P+ G + + AGG+ Y ++
Sbjct: 107 GDNVERIHAGDKLSVDLSSGKIRDITTGETFQATPLPGFIQDIAKAGGLIQYVKE 161
>gi|255524087|ref|ZP_05391048.1| 3-isopropylmalate dehydratase, small subunit [Clostridium
carboxidivorans P7]
gi|296188457|ref|ZP_06856845.1| 3-isopropylmalate dehydratase, small subunit [Clostridium
carboxidivorans P7]
gi|255512224|gb|EET88503.1| 3-isopropylmalate dehydratase, small subunit [Clostridium
carboxidivorans P7]
gi|296046721|gb|EFG86167.1| 3-isopropylmalate dehydratase, small subunit [Clostridium
carboxidivorans P7]
Length = 163
Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 93/164 (56%), Gaps = 15/164 (9%)
Query: 78 GDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKIIIAG 137
G+N+DTD IIPA YL+ S+P E L ++ + L + + + I+IAG
Sbjct: 10 GNNVDTDVIIPARYLS--TSDPKE---LAAHCMEDLDKDFKNKI-------SAGDIMIAG 57
Query: 138 GNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEECSTGD 197
NFGCGSSREHAP+A+ A+G ++AE++ARIFFRNS+ G P+ ++ D
Sbjct: 58 KNFGCGSSREHAPIAIKASGIGCIIAETFARIFFRNSINIG--LPIMECTEAAKDIEEND 115
Query: 198 VVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
V+I+++ + N T K Y P + + ++DA G+ Y ++
Sbjct: 116 EVSIDVSTGIITNITKNKTYTAVPFPEFMQKIVDADGLINYIKQ 159
>gi|160931388|ref|ZP_02078786.1| hypothetical protein CLOLEP_00223 [Clostridium leptum DSM 753]
gi|156869635|gb|EDO63007.1| 3-isopropylmalate dehydratase, small subunit [Clostridium leptum
DSM 753]
Length = 161
Score = 103 bits (256), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 91/167 (54%), Gaps = 17/167 (10%)
Query: 71 HGLCYVVGDNIDTDQIIPAEYLTL-VPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
HG + GDN+DTD IIPA YLT VP E+L ++ + + + +
Sbjct: 4 HGFVHKYGDNVDTDVIIPARYLTTSVP------EELAAHCMEDIDREFIHKV-------K 50
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
I++A NFGCGSSREHAP+A+ AAG S V+A ++ARIF+RN++ G P+
Sbjct: 51 PGDIMVADKNFGCGSSREHAPIAIKAAGISVVIASTFARIFYRNAINIG--LPIMECGEA 108
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIF 235
+ GD V ++ + N TTGK Y+ +P + +I+ GG+
Sbjct: 109 ARDIKAGDEVNVDFDTGVITNVTTGKTYQAQPFPPFIQNIIEKGGLL 155
>gi|15679386|ref|NP_276503.1| 3-isopropylmalate dehydratase small subunit [Methanothermobacter
thermautotrophicus str. Delta H]
gi|3122331|sp|O27440.1|LEUD2_METTH RecName: Full=3-isopropylmalate dehydratase small subunit 2;
AltName: Full=Alpha-IPM isomerase 2; Short=IPMI 2;
AltName: Full=Isopropylmalate isomerase 2
gi|2622497|gb|AAB85864.1| 3-isopropylmalate dehydratase, LeuC subunit [Methanothermobacter
thermautotrophicus str. Delta H]
Length = 162
Score = 103 bits (256), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 95/174 (54%), Gaps = 17/174 (9%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
G + D++DTD IIP YL + +P EKL + + GL + ++
Sbjct: 1 MKGKVWKFPDDVDTDIIIPGRYLVM--RDP---EKLREHVMEGLDPEFPSKV-------K 48
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
I+AG NFGCGSSREHAP+AL AG +AV+AES+ARIF+RN++ G PL +
Sbjct: 49 PGDFIVAGKNFGCGSSREHAPLALKGAGIAAVIAESFARIFYRNAINVG--IPLLEAPGI 106
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARKTG 242
E+ + GD + +++ +I E+ K + D + +++ GG+ Y +K G
Sbjct: 107 TEKLNEGDEIEVDLDRGVIIRGDD--EFPFKKLPDFMVEILEKGGLIPYLKKKG 158
>gi|402313852|ref|ZP_10832762.1| 3-isopropylmalate dehydratase, small subunit [Lachnospiraceae
bacterium ICM7]
gi|400365634|gb|EJP18685.1| 3-isopropylmalate dehydratase, small subunit [Lachnospiraceae
bacterium ICM7]
Length = 163
Score = 103 bits (256), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 91/168 (54%), Gaps = 15/168 (8%)
Query: 71 HGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTK 130
G + G+N+DTD IIPA YL N E+L + + + + + K
Sbjct: 4 RGHVFKYGENVDTDVIIPARYL-----NATTGEELAKHCMEDIDKEFVNKV-------QK 51
Query: 131 YKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLC 190
II+A NFGCGSSREHAP+A+ A+G S V+A+++ARIF+RNS+ G P+
Sbjct: 52 GDIIVARKNFGCGSSREHAPLAIKASGVSVVIADTFARIFYRNSINIG--LPIIESPEAA 109
Query: 191 EECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAY 237
E GD V ++ + + TTGK YK + + + +I+AGG+ Y
Sbjct: 110 AEIKAGDEVKVDFNTGLITDITTGKTYKGQAFPEFMQNIINAGGLVNY 157
>gi|167036448|ref|YP_001664026.1| 3-isopropylmalate dehydratase small subunit [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|256751439|ref|ZP_05492317.1| 3-isopropylmalate dehydratase, small subunit [Thermoanaerobacter
ethanolicus CCSD1]
gi|320114873|ref|YP_004185032.1| 3-isopropylmalate dehydratase small subunit [Thermoanaerobacter
brockii subsp. finnii Ako-1]
gi|326390348|ref|ZP_08211907.1| 3-isopropylmalate dehydratase, small subunit [Thermoanaerobacter
ethanolicus JW 200]
gi|392940038|ref|ZP_10305682.1| 3-isopropylmalate dehydratase, small subunit [Thermoanaerobacter
siderophilus SR4]
gi|166855282|gb|ABY93690.1| 3-isopropylmalate dehydratase, small subunit [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|256749658|gb|EEU62684.1| 3-isopropylmalate dehydratase, small subunit [Thermoanaerobacter
ethanolicus CCSD1]
gi|319927964|gb|ADV78649.1| 3-isopropylmalate dehydratase, small subunit [Thermoanaerobacter
brockii subsp. finnii Ako-1]
gi|325993625|gb|EGD52058.1| 3-isopropylmalate dehydratase, small subunit [Thermoanaerobacter
ethanolicus JW 200]
gi|392291788|gb|EIW00232.1| 3-isopropylmalate dehydratase, small subunit [Thermoanaerobacter
siderophilus SR4]
Length = 160
Score = 103 bits (256), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 61/164 (37%), Positives = 92/164 (56%), Gaps = 15/164 (9%)
Query: 78 GDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKIIIAG 137
GDNIDTD IIPA YL S+P E L + + L + + + E + I++ G
Sbjct: 9 GDNIDTDVIIPARYLN--TSDPQE---LAQHCMEDLDKEFKNK-VQEGD------ILVVG 56
Query: 138 GNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEECSTGD 197
NFG GSSREHAP+A+ A+G S ++A+S+ARIFFRN++ G P+ + GD
Sbjct: 57 ENFGSGSSREHAPIAIKASGISCIIAKSFARIFFRNAINIG--LPILECKEAVDGIEEGD 114
Query: 198 VVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
+V ++ + N T G E+K +P D + ++ GG+ Y R+
Sbjct: 115 IVLVDTDNGIIKNLTKGTEFKAQPFPDFIKEIMKYGGLINYVRE 158
>gi|312143756|ref|YP_003995202.1| 3-isopropylmalate dehydratase small subunit [Halanaerobium
hydrogeniformans]
gi|311904407|gb|ADQ14848.1| 3-isopropylmalate dehydratase, small subunit [Halanaerobium
hydrogeniformans]
Length = 163
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/175 (37%), Positives = 98/175 (56%), Gaps = 15/175 (8%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
G + GDN+DTD IIPA YLT S+P E L ++ + + A + + ++E +
Sbjct: 3 LKGKVFKYGDNVDTDVIIPARYLT--SSSP---EVLAAHCMEDIDADFAEQ-VEEGD--- 53
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
II+ G NFG GSSREHAP+A+ AG S VVAES+ARIF+RNS+ G P+
Sbjct: 54 ---IIVGGKNFGSGSSREHAPLAIKYAGVSCVVAESFARIFYRNSINIG--LPILECQEA 108
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARKTGM 243
E GD + ++I + + N TG+ Y+ + + +I GG+ + +K G+
Sbjct: 109 VEATENGDTLEVDIDQGIVKNLRTGESYQAEAFPPFMQEIIKDGGLIEHIKKVGV 163
>gi|255283335|ref|ZP_05347890.1| 3-isopropylmalate dehydratase, small subunit [Bryantella
formatexigens DSM 14469]
gi|255266189|gb|EET59394.1| 3-isopropylmalate dehydratase, small subunit [Marvinbryantia
formatexigens DSM 14469]
Length = 161
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 92/173 (53%), Gaps = 19/173 (10%)
Query: 71 HGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTK 130
HG + GDN+DTD IIPA YL S+P E AT+ ID+
Sbjct: 4 HGTVFKYGDNVDTDVIIPARYLN--SSDPAEL------------ATHCMEDIDKEFIHKM 49
Query: 131 YK--IIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEAR 188
+K II+A NFGCGSSREHAP+AL AAG S V+AE++ARIF+RN++ G P+
Sbjct: 50 HKGDIIVAKKNFGCGSSREHAPMALKAAGVSCVIAETFARIFYRNAINIG--LPIIECPE 107
Query: 189 LCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
GD V ++ + N T G ++K + + + +I+A G+ Y +
Sbjct: 108 ATRGIEAGDEVEVDFDSGIIYNRTKGTQFKGQAFPEFMQKIIEAEGLINYINR 160
>gi|328954567|ref|YP_004371901.1| 3-isopropylmalate dehydratase small subunit [Desulfobacca
acetoxidans DSM 11109]
gi|328454891|gb|AEB10720.1| 3-isopropylmalate dehydratase small subunit [Desulfobacca
acetoxidans DSM 11109]
Length = 164
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/172 (36%), Positives = 94/172 (54%), Gaps = 15/172 (8%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
G + G++IDTD IIPA YL N + ++L +A+ F+ + +
Sbjct: 3 LRGKAHKFGNDIDTDAIIPARYL-----NTSDSQELAKHAM----EDADPEFVKQAQVGD 53
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
IIAG NFGCGSSREHAP+AL AAG S V+A S+ARIF+RN+ G P+ A
Sbjct: 54 ---FIIAGKNFGCGSSREHAPIALKAAGLSGVIAGSFARIFYRNAFNMG--LPIFESAAA 108
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
+E G V++++ + + TTGK Y +P+ + +I GG+ ++ K
Sbjct: 109 AQEIQAGHDVSVDLDSGIITDLTTGKTYPSQPLPPFMQQLIADGGLISHIMK 160
>gi|153853732|ref|ZP_01995088.1| hypothetical protein DORLON_01079 [Dorea longicatena DSM 13814]
gi|149753482|gb|EDM63413.1| 3-isopropylmalate dehydratase small subunit [Dorea longicatena DSM
13814]
Length = 163
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 91/167 (54%), Gaps = 15/167 (8%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + GDN+DTD IIPA YL N + ++L S+A+ + + +
Sbjct: 5 GHVFKYGDNVDTDVIIPARYL-----NSFDAQELASHAMADIDPEFVNKV-------QPG 52
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
II+A NFGCGSSREHAP+ L AG S V+AE++ARIF+RN++ G P+ +
Sbjct: 53 DIIVANKNFGCGSSREHAPLCLKTAGVSCVIAETFARIFYRNAINIG--LPIIECPEAAK 110
Query: 192 ECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAY 237
GD V I+ ++ + T G E++ +P + + +I AGG+ Y
Sbjct: 111 AIEAGDEVEIDFDSGKICDRTKGTEFQGQPFPEFMQKLIAAGGLVKY 157
>gi|327400875|ref|YP_004341714.1| 3-isopropylmalate dehydratase small subunit [Archaeoglobus
veneficus SNP6]
gi|327316383|gb|AEA46999.1| 3-isopropylmalate dehydratase small subunit [Archaeoglobus
veneficus SNP6]
Length = 161
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/169 (36%), Positives = 98/169 (57%), Gaps = 16/169 (9%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + GD+IDTD II +YL + ++P E K + + F+ E +
Sbjct: 2 GRAWKFGDDIDTDVIIQGKYLVI--NDPAELAK-------HVFENVRSEFVKEVKPGD-- 50
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
++AG NFGCGSSREHAP+AL A G AV+A+SYARIFFRN++ G + L E + +
Sbjct: 51 -FVVAGENFGCGSSREHAPLALKATGIEAVIAKSYARIFFRNAINIG-LRAL--ECKDAD 106
Query: 192 ECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYAR 239
+ GD + ++ + + ++N T G+EY + P+ + L +I+ GG+ + +
Sbjct: 107 KIDDGDELEVDYSRNVIVNKTKGEEYPINPLPEFLLQIIEKGGLVGFGK 155
>gi|260437360|ref|ZP_05791176.1| 3-isopropylmalate dehydratase, small subunit [Butyrivibrio
crossotus DSM 2876]
gi|292810272|gb|EFF69477.1| 3-isopropylmalate dehydratase, small subunit [Butyrivibrio
crossotus DSM 2876]
Length = 161
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/150 (41%), Positives = 83/150 (55%), Gaps = 18/150 (12%)
Query: 71 HGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT- 129
HG + GDN+DTD IIPA YL S+P E AT+ ID++ K
Sbjct: 4 HGTVFKYGDNVDTDVIIPARYLN--SSDPAEL------------ATHCMEDIDKDFVKNV 49
Query: 130 -KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEAR 188
K II+A NFGCGSSREHAP+A+ AAG S V+AE++ARIF+RN++ G P+
Sbjct: 50 KKGDIIVADKNFGCGSSREHAPIAIKAAGVSCVIAETFARIFYRNAINIG--LPIIECPE 107
Query: 189 LCEECSTGDVVTIEIAESRLINHTTGKEYK 218
+ GD V ++ + N T G E+K
Sbjct: 108 ASKGIENGDDVEVDFDSGIIYNRTKGTEFK 137
>gi|169351729|ref|ZP_02868667.1| hypothetical protein CLOSPI_02510 [Clostridium spiroforme DSM 1552]
gi|169291951|gb|EDS74084.1| 3-isopropylmalate dehydratase, small subunit [Clostridium
spiroforme DSM 1552]
Length = 159
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 91/166 (54%), Gaps = 15/166 (9%)
Query: 75 YVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKII 134
Y GDN+DTD IIPA YL N + ++L S+A++ + + +T II
Sbjct: 4 YKYGDNVDTDVIIPARYL-----NSFDAKELASHAMVDIDPDFA-------KTVENGDII 51
Query: 135 IAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEECS 194
+AG NFGCGSSREHAP+ L AG V+A S+ARIF+RN++ G +P+ +
Sbjct: 52 VAGKNFGCGSSREHAPLCLKTAGTKCVIARSFARIFYRNAINIG--FPIMECPEAVDGID 109
Query: 195 TGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYAR 239
GD VT++ + + N T G ++ +P + L +I+ G+ Y
Sbjct: 110 QGDEVTVDFSTGIITNVTKGTSFQSQPFPEFLQKMIEVDGLVNYVN 155
>gi|357635711|ref|ZP_09133589.1| 3-isopropylmalate dehydratase, small subunit [Desulfovibrio sp.
FW1012B]
gi|357584265|gb|EHJ49598.1| 3-isopropylmalate dehydratase, small subunit [Desulfovibrio sp.
FW1012B]
Length = 165
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/174 (37%), Positives = 97/174 (55%), Gaps = 19/174 (10%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
+HG + VG +IDTD IIPA++L + +LG+ + GL + R
Sbjct: 2 YHGKAHKVGAHIDTDAIIPAKFLVTT-----DTAELGANCMEGLEPGWIKRV-------E 49
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPL--DSEA 187
K I++AG NFGCGSSREHAP+AL AG V+A S+ARIF+RNS G + D A
Sbjct: 50 KGDIMVAGENFGCGSSREHAPLALLGAGIPVVIAHSFARIFYRNSFNMGLVLLEIGDDVA 109
Query: 188 RLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
++ GD +T++ + N TTG + + KP+ + ++DAGG+ Y ++
Sbjct: 110 KI----KDGDELTVDADTGVIENVTTGAKIQCKPVPPFMQSILDAGGLVPYVKE 159
>gi|383754471|ref|YP_005433374.1| putative 3-isopropylmalate dehydratase small subunit [Selenomonas
ruminantium subsp. lactilytica TAM6421]
gi|381366523|dbj|BAL83351.1| putative 3-isopropylmalate dehydratase small subunit [Selenomonas
ruminantium subsp. lactilytica TAM6421]
Length = 162
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 95/174 (54%), Gaps = 15/174 (8%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
G + GDNIDTD IIPA YL N + ++L S+ ++ + ++ + E +
Sbjct: 3 LEGKVWRYGDNIDTDVIIPARYL-----NTFDPKELASHCMVDIDESFAPN-VQEGD--- 53
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
I++ G NFGCGSSREHAPVA+ A+G V+A S+ARIF+RN + G PL
Sbjct: 54 ---IMVGGRNFGCGSSREHAPVAIKASGIPVVIAASFARIFYRNGINIG--LPLLEIGDD 108
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPI-GDLGPVIDAGGIFAYARKTG 242
E+ D + +++ + N TTG + P+ G + + +AGG+ Y ++ G
Sbjct: 109 VEKIHADDKLQVDVTTGEIKNLTTGDVFHAHPLPGFVQEIAEAGGLIEYIKRKG 162
>gi|218886884|ref|YP_002436205.1| 3-isopropylmalate dehydratase small subunit [Desulfovibrio vulgaris
str. 'Miyazaki F']
gi|218757838|gb|ACL08737.1| 3-isopropylmalate dehydratase, small subunit [Desulfovibrio
vulgaris str. 'Miyazaki F']
Length = 163
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 93/173 (53%), Gaps = 15/173 (8%)
Query: 69 TFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETK 128
++ G + VG++IDTD IIPA +L + +KLG + GL + R
Sbjct: 2 SYTGTAHKVGEHIDTDAIIPARFLVTT-----DTQKLGENCMAGLEEGWVKRV------- 49
Query: 129 TKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEAR 188
+++AG NFGCGSSREHAP+A+ AG V+A S+ARIF+RN+ G + L
Sbjct: 50 KPGDVMVAGRNFGCGSSREHAPIAILGAGMPVVIAHSFARIFYRNAFNMGLL--LLEVGD 107
Query: 189 LCEECSTGDVVTIEIAESRLINHTTGKEYKLKPI-GDLGPVIDAGGIFAYARK 240
++ + GD V ++ A+ + N TTG P+ + ++D GG+ Y R+
Sbjct: 108 EVDKIADGDTVEVDAAKGLITNRTTGATITCPPLPASMRELLDKGGLVPYVRE 160
>gi|410720280|ref|ZP_11359637.1| 3-isopropylmalate dehydratase, small subunit [Methanobacterium sp.
Maddingley MBC34]
gi|410601327|gb|EKQ55844.1| 3-isopropylmalate dehydratase, small subunit [Methanobacterium sp.
Maddingley MBC34]
Length = 170
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/172 (40%), Positives = 90/172 (52%), Gaps = 21/172 (12%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + D+IDTD IIP YL ++L S+ L G +T K
Sbjct: 7 GKVWKFRDSIDTDVIIPGRYLRTFS-----LDELASHVLEGEDPEFTNNV-------EKG 54
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG-EIYPLDSEARLC 190
II+AG NFGCGSSRE APVAL AG A+VA S+ARIF+RN++ G + D EA
Sbjct: 55 DIIVAGWNFGCGSSREQAPVALKHAGVDAIVARSFARIFYRNAINVGLPVIVADIEA--- 111
Query: 191 EECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD--LGPVIDAGGIFAYARK 240
GD + I++AE + N TTGK ++P D LG + D G + Y K
Sbjct: 112 ---DKGDELRIDLAEGIIHNLTTGKSCHIQPFHDFMLGILQDGGLVQHYLHK 160
>gi|260587903|ref|ZP_05853816.1| 3-isopropylmalate dehydratase, small subunit [Blautia hansenii DSM
20583]
gi|260542168|gb|EEX22737.1| 3-isopropylmalate dehydratase, small subunit [Blautia hansenii DSM
20583]
Length = 162
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 94/171 (54%), Gaps = 15/171 (8%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + GDN+DTD IIPA YL N + E+L ++ + + + NE K K
Sbjct: 5 GNAFKYGDNVDTDVIIPARYL-----NSSKAEELAAHCMEDIDKNFV------NEVK-KG 52
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
I+ A NFGCGSSREHAP+A+ AAG S V+AE++ARIF+RN++ G P+
Sbjct: 53 DILAANKNFGCGSSREHAPMAIKAAGISCVIAETFARIFYRNAINIG--LPIVECPEAAR 110
Query: 192 ECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARKT 241
+ GD V ++ + N + KEY ++P + + +I+A G+ Y K
Sbjct: 111 DIEKGDEVEVDFDNGIIRNLSKEKEYPIQPFPEFMQRIIEAEGLVNYIIKN 161
>gi|291525128|emb|CBK90715.1| 3-isopropylmalate dehydratase, small subunit [Eubacterium rectale
DSM 17629]
Length = 162
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/176 (37%), Positives = 95/176 (53%), Gaps = 25/176 (14%)
Query: 71 HGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDE---NET 127
HG + GDN+DTD IIPA YL S+P E AT+ ID+ N
Sbjct: 5 HGRVFKYGDNVDTDVIIPARYLN--SSDPKEL------------ATHCMEDIDKDFVNNV 50
Query: 128 KTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEA 187
K I++A NFGCGSSREHAP+A+ AAG S V+AE++ARIF+RN++ G P+
Sbjct: 51 KAG-DIMVANKNFGCGSSREHAPIAIKAAGVSCVIAETFARIFYRNAINIG--LPIIECP 107
Query: 188 RLCEECSTGDVVTIEIAESRLINHTTGKEYK---LKPIGDLGPVIDAGGIFAYARK 240
+ + GD VT++ + + TTG+++K P + +ID G+ Y +
Sbjct: 108 EAAKAINAGDEVTVDFDSGIITDETTGEKFKGQAFPPF--MQKIIDCEGLVNYINQ 161
>gi|166032641|ref|ZP_02235470.1| hypothetical protein DORFOR_02356 [Dorea formicigenerans ATCC
27755]
gi|346307595|ref|ZP_08849727.1| 3-isopropylmalate dehydratase small subunit [Dorea formicigenerans
4_6_53AFAA]
gi|166026998|gb|EDR45755.1| 3-isopropylmalate dehydratase, small subunit [Dorea formicigenerans
ATCC 27755]
gi|345904944|gb|EGX74685.1| 3-isopropylmalate dehydratase small subunit [Dorea formicigenerans
4_6_53AFAA]
Length = 164
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 90/167 (53%), Gaps = 15/167 (8%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + GDN+DTD IIPA YL N + ++L S+A+ + + +
Sbjct: 5 GHVFKYGDNVDTDVIIPARYL-----NSFDAQELASHAMADIDPEFVNKV-------QPG 52
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
+I+A NFGCGSSREHAP+ L AG S V+AE++ARIF+RN++ G P+ +
Sbjct: 53 DLIVANKNFGCGSSREHAPLCLKTAGVSCVIAETFARIFYRNAINIG--LPIIECPEAAK 110
Query: 192 ECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAY 237
GD V ++ + N T G E+K +P + + +I AGG+ Y
Sbjct: 111 GIEAGDEVEVDFDNGMIYNRTKGTEFKGQPFPEFMQKLIAAGGLVKY 157
>gi|448587021|ref|ZP_21648773.1| 3-isopropylmalate dehydratase small subunit [Haloferax gibbonsii
ATCC 33959]
gi|445724241|gb|ELZ75875.1| 3-isopropylmalate dehydratase small subunit [Haloferax gibbonsii
ATCC 33959]
Length = 176
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/169 (37%), Positives = 99/169 (58%), Gaps = 16/169 (9%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G +V GDNIDTDQI P+ ++ V S+PDE L ++A L ++ E+
Sbjct: 18 GRAWVFGDNIDTDQITPSRFI--VSSDPDE---LATHAFEDLRPEFS-------ESVEPG 65
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
++AG NFG GSSREH+P++L AG SAVVA+S+ARIFFRN++ G + A E
Sbjct: 66 DFVVAGENFGSGSSREHSPLSLVGAGVSAVVAQSFARIFFRNAINLGLPVLICPGADAIE 125
Query: 192 ECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYAR 239
+ GD + +++ + NHT + Y+ + + + L +++ GG+ AY +
Sbjct: 126 D---GDEIHVDLDAGVVTNHTRDETYEAEALPEFLQSLVEQGGLKAYTK 171
>gi|313896918|ref|ZP_07830465.1| putative 3-isopropylmalate dehydratase, small subunit [Selenomonas
sp. oral taxon 137 str. F0430]
gi|402302372|ref|ZP_10821487.1| putative 3-isopropylmalate dehydratase, small subunit [Selenomonas
sp. FOBRC9]
gi|312974365|gb|EFR39833.1| putative 3-isopropylmalate dehydratase, small subunit [Selenomonas
sp. oral taxon 137 str. F0430]
gi|400380779|gb|EJP33591.1| putative 3-isopropylmalate dehydratase, small subunit [Selenomonas
sp. FOBRC9]
Length = 167
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/172 (36%), Positives = 93/172 (54%), Gaps = 15/172 (8%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + GDNIDTD IIPA YL N E + L ++ + + T+ +
Sbjct: 4 GKVWRYGDNIDTDVIIPARYL-----NTFEPKALAAHCMEDIDTTFA-------KNVAAG 51
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
II+ G NFGCGSSREHAP+A+ A+G V+A S+ARIF+RN + G PL E
Sbjct: 52 DIIVGGRNFGCGSSREHAPIAIAASGVPVVIAASFARIFYRNGINIG--LPLLEIGDDVE 109
Query: 192 ECSTGDVVTIEIAESRLINHTTGKEYKLKPI-GDLGPVIDAGGIFAYARKTG 242
+ GD ++++ A + + TTG ++ P+ G + + AGG+ Y ++ G
Sbjct: 110 KIHAGDRLSVDTATGEIRDLTTGDTFRAHPLPGFVQEIAAAGGLLNYIKENG 161
>gi|154148307|ref|YP_001406816.1| 3-isopropylmalate dehydratase small subunit [Campylobacter hominis
ATCC BAA-381]
gi|153804316|gb|ABS51323.1| 3-isopropylmalate dehydratase small subunit [Campylobacter hominis
ATCC BAA-381]
Length = 159
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/168 (36%), Positives = 90/168 (53%), Gaps = 16/168 (9%)
Query: 75 YVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKII 134
+ DN+DTD II A YL N + +L + + + ++ ++ II
Sbjct: 5 WKFKDNVDTDIIIAARYL-----NTSDENELAKHIMEDADPKFFSKI-------SRGDII 52
Query: 135 IAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEECS 194
+AG NFGCGSSREHAP+AL AAG S V+A+S+ARIF+RNS G L E+ +E +
Sbjct: 53 VAGENFGCGSSREHAPMALKAAGISCVIAKSFARIFYRNSFNMG---LLILESHQTDEIN 109
Query: 195 TGDVVTIEIAESRLINHTTGKEYKLKPI-GDLGPVIDAGGIFAYARKT 241
GD + I + + N T K YK I + ++ GG+ YA+K
Sbjct: 110 EGDELEINVNNGEIKNLTQNKIYKFTQIPAFMQELLKDGGLINYAKKN 157
>gi|423081962|ref|ZP_17070557.1| 3-isopropylmalate dehydratase, small subunit [Clostridium difficile
002-P50-2011]
gi|423085566|ref|ZP_17074008.1| 3-isopropylmalate dehydratase, small subunit [Clostridium difficile
050-P50-2011]
gi|357549212|gb|EHJ31059.1| 3-isopropylmalate dehydratase, small subunit [Clostridium difficile
002-P50-2011]
gi|357549483|gb|EHJ31329.1| 3-isopropylmalate dehydratase, small subunit [Clostridium difficile
050-P50-2011]
Length = 163
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/151 (36%), Positives = 84/151 (55%), Gaps = 14/151 (9%)
Query: 71 HGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTK 130
+G + GDNIDTD IIPA YL + +Y++L ++ + + + ++ +
Sbjct: 4 NGSVFKFGDNIDTDVIIPARYLNIA-----DYKELATHCMEDIDDNFISKV-------KE 51
Query: 131 YKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLC 190
II+A NFGCGSSREHAP+ + +G S V+A ++ARIFFRNS+ G P+
Sbjct: 52 GDIIVATKNFGCGSSREHAPIVIKESGVSCVIASTFARIFFRNSINIG--LPILECEEAA 109
Query: 191 EECSTGDVVTIEIAESRLINHTTGKEYKLKP 221
GD + ++ + + N T GKEYK +P
Sbjct: 110 NNIDEGDNIEVDFSTGVIKNITKGKEYKAEP 140
>gi|124485433|ref|YP_001030049.1| 3-isopropylmalate dehydratase, small subunit [Methanocorpusculum
labreanum Z]
gi|124362974|gb|ABN06782.1| 3-isopropylmalate dehydratase, small subunit [Methanocorpusculum
labreanum Z]
Length = 158
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/175 (37%), Positives = 101/175 (57%), Gaps = 24/175 (13%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + GD+IDTD IIP +LT+ +P E L S+A G + D +
Sbjct: 2 GRAWKFGDDIDTDAIIPGRFLTIY--DPKE---LASHAFEGTRNEFAANSKDGD------ 50
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLC- 190
+I+AG NFGCGSSREHAP+AL AG VVA+S+ARIF+RN++ TG + PL +C
Sbjct: 51 -VIVAGRNFGCGSSREHAPLALKGAGIEFVVAKSFARIFYRNAINTG-VLPL-----VCP 103
Query: 191 --EECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARKTG 242
++ + G V + + ++ + K+Y L+PI + + +++AGG+ YA+ G
Sbjct: 104 DTDKIADGAEVFVNLGQAYI--EADKKQYPLEPIPEFMMRIVEAGGLVEYAKMRG 156
>gi|238924354|ref|YP_002937870.1| LeuD [Eubacterium rectale ATCC 33656]
gi|238876029|gb|ACR75736.1| LeuD [Eubacterium rectale ATCC 33656]
gi|291529383|emb|CBK94969.1| 3-isopropylmalate dehydratase, small subunit [Eubacterium rectale
M104/1]
Length = 162
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/176 (37%), Positives = 94/176 (53%), Gaps = 25/176 (14%)
Query: 71 HGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDE---NET 127
HG + GDN+DTD IIPA YL S+P E AT+ ID+ N
Sbjct: 5 HGRVFKYGDNVDTDVIIPARYLN--SSDPKEL------------ATHCMEDIDKDFVNNV 50
Query: 128 KTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEA 187
K I++A NFGCGSSREHAP+A+ AAG S V+AE++ARIF+RN++ G P+
Sbjct: 51 KAG-DIMVANKNFGCGSSREHAPIAIKAAGVSCVIAETFARIFYRNAINIG--LPIIECP 107
Query: 188 RLCEECSTGDVVTIEIAESRLINHTTGKEYK---LKPIGDLGPVIDAGGIFAYARK 240
+ GD VT++ + + TTG+++K P + +ID G+ Y +
Sbjct: 108 EAAKAIKAGDEVTVDFDSGIITDETTGEKFKGQAFPPF--MQKIIDCEGLVNYINQ 161
>gi|338812647|ref|ZP_08624817.1| 3-isopropylmalate dehydratase small subunit [Acetonema longum DSM
6540]
gi|337275431|gb|EGO63898.1| 3-isopropylmalate dehydratase small subunit [Acetonema longum DSM
6540]
Length = 163
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 97/171 (56%), Gaps = 15/171 (8%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
G ++ GDN+DTD IIPA YL N + ++L + + + T+ +
Sbjct: 3 LQGKIWIYGDNVDTDAIIPARYL-----NTADPKELAKHCMEDIDTTFAGKV-------K 50
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
++I+AG NFGCGSSREHAPVA+ A+G + VVA+S+ARIF+RN++ G PL
Sbjct: 51 PGEMIVAGRNFGCGSSREHAPVAIKASGIACVVADSFARIFYRNAINIG--LPLLELGPA 108
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYAR 239
E + D + ++A+ + + ++GK ++ +P+ + + AGG+ Y +
Sbjct: 109 VHEIAADDTLAADLAKGTVTSLSSGKVFQAQPLPSFVQEIAAAGGLIEYLK 159
>gi|73669760|ref|YP_305775.1| 3-isopropylmalate dehydratase [Methanosarcina barkeri str. Fusaro]
gi|72396922|gb|AAZ71195.1| 3-isopropylmalate dehydratase, small subunit [Methanosarcina
barkeri str. Fusaro]
Length = 163
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/172 (36%), Positives = 99/172 (57%), Gaps = 21/172 (12%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + GDN++TD+IIP +YL + + ++A+ G+ +T +F ++
Sbjct: 6 GRVWKFGDNVNTDEIIPGKYLR-----SKDVQIFAAHAMEGINPEFTKKF--------RF 52
Query: 132 -KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLC 190
II+AG NFGCGSSRE AP+AL AG S V+A+S+ARIFFRN++ G PL +
Sbjct: 53 GDIIVAGTNFGCGSSREQAPLALKYAGVSCVIAKSFARIFFRNAINIG--LPL---IEVD 107
Query: 191 EECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARKT 241
EC GD V +++A+ +I G +K + D L +++ GG+ A+ +K
Sbjct: 108 IECQEGDKVKVDLAKGEVIISEKG-TFKGNKLPDFLLEILNDGGLVAHRKKV 158
>gi|284162102|ref|YP_003400725.1| 3-isopropylmalate dehydratase small subunit [Archaeoglobus
profundus DSM 5631]
gi|284012099|gb|ADB58052.1| 3-isopropylmalate dehydratase, small subunit [Archaeoglobus
profundus DSM 5631]
Length = 159
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 98/171 (57%), Gaps = 17/171 (9%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + GD++DTD IIP +YL + ++P E L + + + D +
Sbjct: 2 GRAWKFGDDVDTDAIIPGKYLVI--NDPKE---LAKHVFENIRPEFAKNVKDGD------ 50
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
++AG NFGCGSSREHAP++L A+G VVA+SYARIFFRN++ G P E + +
Sbjct: 51 -FVVAGENFGCGSSREHAPLSLKASGVY-VVAKSYARIFFRNAINIG--LPA-FECKYTD 105
Query: 192 ECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARKT 241
+ GD + +++ + ++N T G++Y + P+ D L +I+ GG+ + R+
Sbjct: 106 KIDDGDELKLDLDRNVIVNVTKGEKYPINPVPDFLKEIIECGGLIEFCRRV 156
>gi|251780679|ref|ZP_04823599.1| 3-isopropylmalate dehydratase, small subunit [Clostridium botulinum
E1 str. 'BoNT E Beluga']
gi|243084994|gb|EES50884.1| 3-isopropylmalate dehydratase, small subunit [Clostridium botulinum
E1 str. 'BoNT E Beluga']
Length = 161
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 92/169 (54%), Gaps = 15/169 (8%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + GDN+DTD IIPA YL N +++L S+ + + + D +
Sbjct: 5 GRVFKYGDNVDTDVIIPARYL-----NTSNHKELASHCMEDIDKDFVNNVKDGD------ 53
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
II+A NFGCGSSREHAP+A+ A+G S V+A ++ARIF+RNS+ G P+ E
Sbjct: 54 -IIVANKNFGCGSSREHAPIAIKASGISCVIASTFARIFYRNSINIG--LPILECDEAVE 110
Query: 192 ECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYAR 239
+ GD + ++ + + N + ++YK + + + +ID G+ Y R
Sbjct: 111 NINNGDELEVDFSTGIIKNLSKNEQYKGEAFPEFMQKIIDNNGLIGYIR 159
>gi|452943644|ref|YP_007499809.1| 3-isopropylmalate dehydratase, small subunit [Hydrogenobaculum sp.
HO]
gi|452882062|gb|AGG14766.1| 3-isopropylmalate dehydratase, small subunit [Hydrogenobaculum sp.
HO]
Length = 165
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/169 (39%), Positives = 92/169 (54%), Gaps = 14/169 (8%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + DNIDTDQIIPA YL S+P E L S+ + + F E++
Sbjct: 5 GRIWKFKDNIDTDQIIPARYLN--TSDPLE---LASHVM---EDSEKPNFAKEHQEGD-- 54
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
II+AG NFG GSSREHAP+A+ AG VVA+S+ARIFFRN++ G P+ +
Sbjct: 55 -IIVAGKNFGSGSSREHAPIAIKYAGVPVVVAKSFARIFFRNAINIG--LPIVECKEAVD 111
Query: 192 ECSTGDVVTIEIAESRLINHTTGKEY-KLKPIGDLGPVIDAGGIFAYAR 239
E GD+ I++ + N T K Y K +L ++ AGG+ YA+
Sbjct: 112 EAEDGDIFEIDLENGIVKNVTKNKTYSSTKFPEELMAILRAGGLMEYAK 160
>gi|116753349|ref|YP_842467.1| 3-isopropylmalate dehydratase small subunit [Methanosaeta
thermophila PT]
gi|116664800|gb|ABK13827.1| 3-isopropylmalate dehydratase, small subunit [Methanosaeta
thermophila PT]
Length = 161
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 94/167 (56%), Gaps = 16/167 (9%)
Query: 75 YVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKII 134
+ G++IDTD IIP YL + ++ E+L + G+ + E+ II
Sbjct: 5 WKFGNDIDTDVIIPGRYLVI-----NDPEELAKHLFEGIRPEFA-------ESVRHGDII 52
Query: 135 IAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEECS 194
+AG NFGCGSSREHAP+A+ AAG AV+A S+ARIFFRNS+ G + ++A E+
Sbjct: 53 VAGTNFGCGSSREHAPLAIKAAGVEAVIARSFARIFFRNSINIGLPLLICADA---EKID 109
Query: 195 TGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
GD V ++I+ + N + + Y P+ L ++ +GG+ Y +K
Sbjct: 110 DGDSVVVDISRGIVQNISKKESYPTTPLPPFLQEIVRSGGLLNYTKK 156
>gi|332653123|ref|ZP_08418868.1| 3-isopropylmalate dehydratase, small subunit [Ruminococcaceae
bacterium D16]
gi|332518269|gb|EGJ47872.1| 3-isopropylmalate dehydratase, small subunit [Ruminococcaceae
bacterium D16]
Length = 161
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 93/170 (54%), Gaps = 15/170 (8%)
Query: 75 YVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKII 134
Y G N+DTD IIPA +L N L S+ + + A + + T II
Sbjct: 4 YKYGANVDTDVIIPARHL-----NDPSPAALASHCMEDIDADFAS-------TVQPGDII 51
Query: 135 IAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEECS 194
+AG NFGCGSSREHAP+A+ + G V+A S+ARIF+RN++ G +P+ A+ EE
Sbjct: 52 VAGPNFGCGSSREHAPLAIKSCGVKCVIAPSFARIFYRNAINIG--FPIVECAQAAEEIQ 109
Query: 195 TGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARKTGM 243
GD V ++ + + TTGK Y+ P + + +I++GG+ + G+
Sbjct: 110 PGDQVDVDFTTGVITDQTTGKTYQAAPFPEFIKGIIESGGLLNSLKARGV 159
>gi|195952819|ref|YP_002121109.1| 3-isopropylmalate dehydratase, small subunit [Hydrogenobaculum sp.
Y04AAS1]
gi|226736058|sp|B4U7M0.1|LEUD_HYDS0 RecName: Full=3-isopropylmalate dehydratase small subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|195932431|gb|ACG57131.1| 3-isopropylmalate dehydratase, small subunit [Hydrogenobaculum sp.
Y04AAS1]
Length = 165
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/169 (39%), Positives = 92/169 (54%), Gaps = 14/169 (8%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + DNIDTDQIIPA YL S+P E L S+ + + F E++
Sbjct: 5 GKIWKFKDNIDTDQIIPARYLN--TSDPLE---LASHVM---EDSEKPNFAKEHQEGD-- 54
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
II+AG NFG GSSREHAP+A+ AG VVA+S+ARIFFRN++ G P+ +
Sbjct: 55 -IIVAGKNFGSGSSREHAPIAIKYAGVPVVVAKSFARIFFRNAINIG--LPIVECKEAVD 111
Query: 192 ECSTGDVVTIEIAESRLINHTTGKEY-KLKPIGDLGPVIDAGGIFAYAR 239
E GD+ I++ + N T K Y K +L ++ AGG+ YA+
Sbjct: 112 EAEDGDIFEIDLENGIVKNVTKNKTYSSTKFPEELMAILRAGGLMEYAK 160
>gi|453053757|gb|EMF01217.1| 3-isopropylmalate dehydratase small subunit [Streptomyces
mobaraensis NBRC 13819 = DSM 40847]
Length = 174
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/167 (39%), Positives = 93/167 (55%), Gaps = 12/167 (7%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEY-EKLGSYALIGLPATYTTRFIDENETKTK 130
GL Y VGD +DTD + P + P E E+L ALI PA T F+D ++
Sbjct: 5 GLAYGVGDFVDTDVMSPGRF------EPYEGPEQLARIALIDYPAA--TPFVDPATGRSP 56
Query: 131 YKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLC 190
Y +I AG FGCGSSRE AP AL AG VVA+S+ IFFRN V G ++P+ ++ L
Sbjct: 57 YTVIFAGTEFGCGSSRETAPQALHHAGARVVVAKSFGNIFFRNCVNMGLLFPVVADHGL- 115
Query: 191 EECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLGPVIDAGGIFAY 237
+E TG VT+++ R++ G+ + +G L ++D GG+ Y
Sbjct: 116 DESVTGRPVTVDLTH-RVVT-CAGRRIEFADLGPLQGIVDVGGLTPY 160
>gi|355679570|ref|ZP_09061403.1| hypothetical protein HMPREF9469_04440 [Clostridium citroniae
WAL-17108]
gi|354812147|gb|EHE96767.1| hypothetical protein HMPREF9469_04440 [Clostridium citroniae
WAL-17108]
Length = 169
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 95/166 (57%), Gaps = 15/166 (9%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKIII 135
VVG+NIDTDQI P +L L ++P+E +GS+ L G+ F K I++
Sbjct: 11 VVGNNIDTDQIYPGRFLAL--TDPEE---IGSHCLSGVDENIAVSF-------PKGGIVV 58
Query: 136 AGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEECST 195
AG NFGCGSSREHAP+AL G SAVVA+S+ARIFFRNS+ G PL + ++
Sbjct: 59 AGTNFGCGSSREHAPIALLHMGVSAVVADSFARIFFRNSINLG--LPLVVCRGIGKKVKY 116
Query: 196 GDVVTIEIAESRLINHTTGKEYKLKPIGDLG-PVIDAGGIFAYARK 240
G + +++ + TG+ + +G+ +++AGGI R+
Sbjct: 117 GQTLKLDLENGTVTVMETGECCLCEKMGEQAFKILEAGGIKPMMRE 162
>gi|410721999|ref|ZP_11361317.1| 3-isopropylmalate dehydratase, small subunit [Methanobacterium sp.
Maddingley MBC34]
gi|410597948|gb|EKQ52549.1| 3-isopropylmalate dehydratase, small subunit [Methanobacterium sp.
Maddingley MBC34]
Length = 169
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 98/172 (56%), Gaps = 17/172 (9%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
G + D++DTD I+P YL L ++L + + G + ++E +
Sbjct: 5 LKGKVWNFPDDVDTDIIVPGRYLVLTGE-----KELAACVMQGHDPDFAKN-VEEGD--- 55
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEAR- 188
II+AG NFGCGSSREHAP+A+ AG SAVVAES+ARIF+RNS+ G + EA+
Sbjct: 56 ---IIVAGKNFGCGSSREHAPIAIKGAGISAVVAESFARIFYRNSINVGLLL---IEAKG 109
Query: 189 LCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYAR 239
+ GD + I++ + + N KE+++KP+ + + +++ GG+ +Y +
Sbjct: 110 ISRNVEEGDEIQIDMDKGVIKNLNNSKEFEIKPLPEFMMGIMNEGGLISYLK 161
>gi|320530534|ref|ZP_08031591.1| 3-isopropylmalate dehydratase small subunit [Selenomonas artemidis
F0399]
gi|320137207|gb|EFW29132.1| 3-isopropylmalate dehydratase small subunit [Selenomonas artemidis
F0399]
Length = 167
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/172 (36%), Positives = 93/172 (54%), Gaps = 15/172 (8%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + GDNIDTD IIPA YL N E + L ++ + + T+ +
Sbjct: 4 GKVWRYGDNIDTDVIIPARYL-----NTFEPKALAAHCMEDIDTTFA-------KNVAVG 51
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
II+ G NFGCGSSREHAP+A+ A+G V+A S+ARIF+RN + G PL E
Sbjct: 52 DIIVGGRNFGCGSSREHAPIAIAASGVPVVIAASFARIFYRNGINIG--LPLLEIGDDVE 109
Query: 192 ECSTGDVVTIEIAESRLINHTTGKEYKLKPI-GDLGPVIDAGGIFAYARKTG 242
+ GD ++++ A + + TTG ++ P+ G + + AGG+ Y ++ G
Sbjct: 110 KIHAGDRLSVDTATGEIRDLTTGDTFRAHPLPGFVQEIAAAGGLLNYIKENG 161
>gi|333980250|ref|YP_004518195.1| 3-isopropylmalate dehydratase small subunit [Desulfotomaculum
kuznetsovii DSM 6115]
gi|333823731|gb|AEG16394.1| 3-isopropylmalate dehydratase small subunit [Desulfotomaculum
kuznetsovii DSM 6115]
Length = 165
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 91/173 (52%), Gaps = 16/173 (9%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
G + GD+IDTD IIPA YL N E +L + + ++ R
Sbjct: 4 LRGKAWKFGDDIDTDAIIPARYL-----NTSEPRELAVHCMEDADPSFAGRV-------Q 51
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
II+AG NFGCGSSREHAP+A+ AAG S V+A S+ARIF+RN+ G P+
Sbjct: 52 PGDIIVAGKNFGCGSSREHAPIAIKAAGVSCVIAASFARIFYRNAFNIG--LPIFESPEA 109
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAY-ARK 240
+ GD V +++ + N T ++Y+ P+ + +I AGG+ Y AR+
Sbjct: 110 AAKIQEGDEVAVDVESGTITNLTRHEQYRATPVPPFMQEIIAAGGLINYVARR 162
>gi|404482727|ref|ZP_11017952.1| 3-isopropylmalate dehydratase small subunit [Clostridiales
bacterium OBRC5-5]
gi|404343817|gb|EJZ70176.1| 3-isopropylmalate dehydratase small subunit [Clostridiales
bacterium OBRC5-5]
Length = 163
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 91/168 (54%), Gaps = 15/168 (8%)
Query: 71 HGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTK 130
G + G+N+DTD IIPA YL N E+L + + + + + K
Sbjct: 4 RGHVFKYGENVDTDVIIPARYL-----NATTGEELAKHCMEDIDKEFVNKV-------QK 51
Query: 131 YKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLC 190
II+A NFGCGSSREHAP+A+ A+G S V+A+++ARIF+RN++ G P+
Sbjct: 52 GDIIVARKNFGCGSSREHAPLAIKASGVSVVIADTFARIFYRNAINIG--LPIIESPEAA 109
Query: 191 EECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAY 237
E GD V ++ + + TTGK YK + + + +I+AGG+ Y
Sbjct: 110 AEIKAGDEVKVDFNTGLITDITTGKTYKGQAFPEFMQNIINAGGLVNY 157
>gi|307353228|ref|YP_003894279.1| 3-isopropylmalate dehydratase small subunit [Methanoplanus
petrolearius DSM 11571]
gi|307156461|gb|ADN35841.1| 3-isopropylmalate dehydratase, small subunit [Methanoplanus
petrolearius DSM 11571]
Length = 168
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/167 (41%), Positives = 99/167 (59%), Gaps = 20/167 (11%)
Query: 75 YVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKII 134
+ GD+IDTD IIP +LT+ +P E L S+A G TR DE + K +
Sbjct: 10 WKFGDDIDTDAIIPGRFLTIY--DPKE---LASHAFEG------TR--DEFPKEAKQGDV 56
Query: 135 IAGG-NFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEEC 193
I GG NFGCGSSREHAP+AL AG VVA+S+ARIF+RN + TG + + EA ++
Sbjct: 57 IVGGRNFGCGSSREHAPIALKGAGIEMVVAKSFARIFYRNCINTGLLPVVCPEA---DKI 113
Query: 194 STGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYAR 239
S D +T + E + +GK++ +P+ + L +I+AGG+ YA+
Sbjct: 114 SEDDTITPRLDEGYI--EVSGKKFATEPVPEFLSKIIEAGGLVEYAK 158
>gi|325262461|ref|ZP_08129198.1| 3-isopropylmalate dehydratase, small subunit [Clostridium sp. D5]
gi|324032293|gb|EGB93571.1| 3-isopropylmalate dehydratase, small subunit [Clostridium sp. D5]
Length = 163
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 93/167 (55%), Gaps = 15/167 (8%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + GDN+DTD IIPA YL N + ++L S+A+ + + N+ K
Sbjct: 5 GHVFKYGDNVDTDVIIPARYL-----NSFDAQELASHAMADIDPEFV------NKVKPG- 52
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
+I+A NFGCGSSREHAP+ L AG S V+AE++ARIF+RN++ G P+ +
Sbjct: 53 DLIVANKNFGCGSSREHAPLCLKTAGVSCVIAETFARIFYRNAINIG--LPIIECPEAAK 110
Query: 192 ECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAY 237
GD V ++ ++ N T G E++ +P + + +I AGG+ Y
Sbjct: 111 GIEAGDEVEVDFDSGKIYNRTKGTEFQGQPFPEFMQKLIAAGGLVNY 157
>gi|339443471|ref|YP_004709476.1| hypothetical protein CXIVA_24070 [Clostridium sp. SY8519]
gi|338902872|dbj|BAK48374.1| hypothetical protein CXIVA_24070 [Clostridium sp. SY8519]
Length = 163
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/173 (35%), Positives = 93/173 (53%), Gaps = 19/173 (10%)
Query: 71 HGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTK 130
+G + GDN+DTD IIPA YL S+P E L + + + + + +
Sbjct: 5 NGTVFKYGDNVDTDVIIPARYLN--SSDPKE---LAQHCMEDIDQEFVHKV-------QQ 52
Query: 131 YKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLC 190
I++A NFGCGSSREHAP+A+ AAG S V+AE++ARIF+RN++ G P+
Sbjct: 53 GDIMVAAKNFGCGSSREHAPIAIKAAGVSCVIAETFARIFYRNAINIG--LPIIECPEAA 110
Query: 191 EECSTGDVVTIEIAESRLINHTTGKEYK---LKPIGDLGPVIDAGGIFAYARK 240
+E + GD V ++ + + TTGK Y+ P + +ID G+ Y +
Sbjct: 111 KEIAAGDRVEVDFDSGVITDQTTGKTYQGQAFPPF--MQKIIDCEGLVNYINQ 161
>gi|282165662|ref|YP_003358047.1| 3-isopropylmalate dehydratase small subunit [Methanocella
paludicola SANAE]
gi|282157976|dbj|BAI63064.1| 3-isopropylmalate dehydratase small subunit [Methanocella
paludicola SANAE]
Length = 176
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/170 (38%), Positives = 96/170 (56%), Gaps = 26/170 (15%)
Query: 75 YVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKII 134
+ GD++DTD IIP +L + ++ ++L +A G+ + D ++
Sbjct: 21 WKFGDDVDTDAIIPGRFLII-----NDAKELAKHAFEGVRPDFRPSPGD---------VV 66
Query: 135 IAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEEC- 193
+AG NFGCGSSREHAP+AL AG V+A+S+ARIFFRNSV G P+ CE+
Sbjct: 67 VAGENFGCGSSREHAPLALKGAGIKCVIAKSFARIFFRNSVNIG--LPMLE----CEDAG 120
Query: 194 --STGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
S GDV+ +E R N T G+ Y+ P+ + L ++ AGG+ YAR+
Sbjct: 121 RISDGDVLEVEGDVIR--NLTKGETYRTAPLPEFLEEIVRAGGLIEYARE 168
>gi|347732696|ref|ZP_08865771.1| isopropylmalate/citramalate isomerase small subunit [Desulfovibrio
sp. A2]
gi|347518544|gb|EGY25714.1| isopropylmalate/citramalate isomerase small subunit [Desulfovibrio
sp. A2]
Length = 163
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 93/173 (53%), Gaps = 15/173 (8%)
Query: 69 TFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETK 128
++ G + VG++IDTD IIPA +L + +KLG + GL + R
Sbjct: 2 SYTGTAHKVGEHIDTDAIIPARFLVTT-----DTKKLGENCMAGLEEGWVKRV------- 49
Query: 129 TKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEAR 188
+++AG NFGCGSSREHAP+A+ AG V+A S+ARIF+RNS G + L
Sbjct: 50 KPGDVMVAGRNFGCGSSREHAPIAILGAGMPVVIAHSFARIFYRNSFNMGLL--LLEVGD 107
Query: 189 LCEECSTGDVVTIEIAESRLINHTTGKEYKLKPI-GDLGPVIDAGGIFAYARK 240
++ + GD V ++ A+ + N TTG P+ + ++D GG+ Y ++
Sbjct: 108 EVDKIADGDTVEVDAAKGLITNRTTGATITCPPLPASMRELLDKGGLVPYVKE 160
>gi|448598725|ref|ZP_21655065.1| 3-isopropylmalate dehydratase small subunit [Haloferax alexandrinus
JCM 10717]
gi|445737880|gb|ELZ89409.1| 3-isopropylmalate dehydratase small subunit [Haloferax alexandrinus
JCM 10717]
Length = 177
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/169 (37%), Positives = 98/169 (57%), Gaps = 16/169 (9%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G +V GDNIDTDQI P+ ++ V S+PDE L S+A L ++ E+
Sbjct: 19 GRAWVFGDNIDTDQITPSRFI--VSSDPDE---LASHAFEDLRPEFS-------ESVETG 66
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
++AG NFG GSSREH+P++L AG SAVVA+S+ARIFFRN++ G + A E
Sbjct: 67 DFVVAGENFGSGSSREHSPLSLVGAGVSAVVAQSFARIFFRNAINLGLPVLICPGADAIE 126
Query: 192 ECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYAR 239
+ GD + +++ + NHT + Y+ + + + L +++ GG+ Y +
Sbjct: 127 D---GDEIHVDLDAGVVTNHTRDETYEAEALPEFLQSLVEQGGLKPYTK 172
>gi|238927546|ref|ZP_04659306.1| 3-isopropylmalate dehydratase [Selenomonas flueggei ATCC 43531]
gi|238884828|gb|EEQ48466.1| 3-isopropylmalate dehydratase [Selenomonas flueggei ATCC 43531]
Length = 167
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/174 (35%), Positives = 91/174 (52%), Gaps = 15/174 (8%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
F G + GDNIDTD IIPA YL N E + L ++ + + T+ +
Sbjct: 2 FEGKVWRYGDNIDTDVIIPARYL-----NTFEPKALAAHCMEDIDTTFAG-------SVQ 49
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
+ I++ G NFGCGSSREHAP+A+ A+G V+A S+ARIF+RN + G PL
Sbjct: 50 QGDIMVGGKNFGCGSSREHAPIAIAASGIPVVIAASFARIFYRNGINIG--LPLLEIGDD 107
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPI-GDLGPVIDAGGIFAYARKTG 242
E+ GD + ++ + N TTG + P+ G + + GG+ Y R+ G
Sbjct: 108 VEKIRAGDRLRVDTETGTIENLTTGDTFHAHPLPGFVQDIARTGGLLNYIRENG 161
>gi|159904916|ref|YP_001548578.1| 3-isopropylmalate dehydratase, small subunit [Methanococcus
maripaludis C6]
gi|159886409|gb|ABX01346.1| 3-isopropylmalate dehydratase, small subunit [Methanococcus
maripaludis C6]
Length = 161
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 96/169 (56%), Gaps = 15/169 (8%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G ++ GD+IDTD IIP YL DEYE L S+ + G+ + ++E +
Sbjct: 5 GKVHLFGDDIDTDAIIPGAYL----KTTDEYE-LASHCMAGIDEDFP-EMVEEGD----- 53
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
++AG NFGCGSSRE AP+A+ G A++ ES+ARIF+RN + G ++P++ + + +
Sbjct: 54 -FLVAGENFGCGSSREQAPIAIKYCGIKAIIVESFARIFYRNCINLG-VFPIECKG-ISK 110
Query: 192 ECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLGPVIDAGGIFAYARK 240
GD++ +++ ++I T L P G ++D GG+ YA+K
Sbjct: 111 HVKDGDLIELDLENKKVILKDTVLNC-LLPTGTAKDIMDEGGLINYAKK 158
>gi|210616207|ref|ZP_03290987.1| hypothetical protein CLONEX_03206 [Clostridium nexile DSM 1787]
gi|210149873|gb|EEA80882.1| hypothetical protein CLONEX_03206 [Clostridium nexile DSM 1787]
Length = 163
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/167 (35%), Positives = 91/167 (54%), Gaps = 15/167 (8%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + GDN+DTD IIPA YL N + ++L S+A++ + + +
Sbjct: 5 GHVFKYGDNVDTDVIIPARYL-----NSFDGKELASHAMVDIDPEFAKKV-------KPG 52
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
+I+A NFGCGSSREHAP+ L AG S V+AE++ARIF+RN++ G P+
Sbjct: 53 DMIVANKNFGCGSSREHAPLCLKEAGVSCVIAETFARIFYRNAINIG--LPIIECPEAAN 110
Query: 192 ECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAY 237
GD V ++ ++ N T G E++ +P + + +I AGG+ Y
Sbjct: 111 GIEAGDEVEVDFDSGKIYNRTKGTEFQGQPFPEFMQKLIAAGGLVNY 157
>gi|313682111|ref|YP_004059849.1| 3-isopropylmalate dehydratase small subunit [Sulfuricurvum kujiense
DSM 16994]
gi|313154971|gb|ADR33649.1| 3-isopropylmalate dehydratase, small subunit [Sulfuricurvum
kujiense DSM 16994]
Length = 167
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/171 (39%), Positives = 94/171 (54%), Gaps = 18/171 (10%)
Query: 71 HGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTK 130
G + G +IDTD II A YL S+P E L + + T+ ++ I +
Sbjct: 5 EGKVWNFGKDIDTDLIIAARYLNT--SDPKE---LAKHVMEDADPTFVSKMIPGD----- 54
Query: 131 YKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG-EIYPLDSEARL 189
II+A NFGCGSSREHAP+AL AAG +AV+A ++ARIF+RN+ G I+ L +
Sbjct: 55 --IIVADENFGCGSSREHAPIALKAAGVAAVIAPTFARIFYRNAFNMGLPIFELPESLEI 112
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYAR 239
E G+ V+I++ + N T GK YK PI + +I AGG+ YA
Sbjct: 113 KE----GESVSIDMDAGTITNTTNGKVYKFIPIPPFMQELIAAGGLMNYAE 159
>gi|448620981|ref|ZP_21668058.1| 3-isopropylmalate dehydratase small subunit [Haloferax
denitrificans ATCC 35960]
gi|445756031|gb|EMA07407.1| 3-isopropylmalate dehydratase small subunit [Haloferax
denitrificans ATCC 35960]
Length = 176
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 99/169 (58%), Gaps = 16/169 (9%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G +V GDNIDTDQI P+ ++ V S+PDE L S+A L ++ ET
Sbjct: 18 GRAWVFGDNIDTDQITPSRFI--VSSDPDE---LASHAFEDLRPEFSGSV----ETG--- 65
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
++AG NFG GSSREH+P++L AG SAVVA+S+ARIFFRN++ G + A E
Sbjct: 66 DFVVAGENFGSGSSREHSPLSLVGAGVSAVVAQSFARIFFRNAINLGLPVLICPGADAIE 125
Query: 192 ECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYAR 239
+ GD + +++ + NHT + Y+ + + + L +++ GG+ AY +
Sbjct: 126 D---GDEIHVDLDAGVVTNHTRDETYEAEALPEFLQSLVEQGGLKAYTK 171
>gi|134046284|ref|YP_001097769.1| 3-isopropylmalate dehydratase, small subunit [Methanococcus
maripaludis C5]
gi|132663909|gb|ABO35555.1| 2-oxosuberate synthase, isomerase small subunit [Methanococcus
maripaludis C5]
Length = 161
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 94/169 (55%), Gaps = 15/169 (8%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G +V GD+IDTD IIP YL DEYE L S+ + G+ + E +
Sbjct: 5 GKVHVFGDDIDTDAIIPGAYL----KTTDEYE-LASHCMAGIDEDFP-------EMVKEG 52
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
++AG NFGCGSSRE AP+A+ G A++ ES+ARIF+RN + G ++P++ + + +
Sbjct: 53 DFLVAGENFGCGSSREQAPIAIKYCGIKAIIVESFARIFYRNCINLG-VFPIECKG-ISK 110
Query: 192 ECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLGPVIDAGGIFAYARK 240
GD++ +++ ++I + + P G ++D GG+ YA+K
Sbjct: 111 HVKDGDLIELDLENKKVILKDKVLDCHI-PTGTAKDIMDEGGLINYAKK 158
>gi|154485059|ref|ZP_02027507.1| hypothetical protein EUBVEN_02782 [Eubacterium ventriosum ATCC
27560]
gi|149734012|gb|EDM50131.1| 3-isopropylmalate dehydratase, small subunit [Eubacterium
ventriosum ATCC 27560]
Length = 162
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 89/168 (52%), Gaps = 15/168 (8%)
Query: 71 HGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTK 130
G + G N+DTD IIPA YL + PD E L + + + + + +K
Sbjct: 4 EGRVFKFGSNVDTDVIIPARYLNV----PDPSE-LAKHCMEDIDKEFVNKV-------SK 51
Query: 131 YKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLC 190
II+A NFGCGSSREHAP+A+ AAG S V+AE++ARIF+RN++ G P+
Sbjct: 52 GDIIVADKNFGCGSSREHAPIAIKAAGVSCVIAETFARIFYRNAINIG--LPIIECPEAA 109
Query: 191 EECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAY 237
+ GD V ++ + N T G EYK + + + +I GG+ Y
Sbjct: 110 KGIEEGDQVEVDFDSGMIYNKTKGTEYKGQAFPEFMQKIISNGGLINY 157
>gi|48477983|ref|YP_023689.1| 3-isopropylmalate dehydratase small subunit [Picrophilus torridus
DSM 9790]
gi|48430631|gb|AAT43496.1| 3-isopropylmalate dehydratase small subunit [Picrophilus torridus
DSM 9790]
Length = 157
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/171 (39%), Positives = 97/171 (56%), Gaps = 20/171 (11%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G +++GDNIDTDQIIPA YL N E EKL + + YT + K
Sbjct: 4 GKAWILGDNIDTDQIIPARYL-----NTSEPEKLAPHFM-----EYTNP--ELASMINKG 51
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
II+AG NFG GSSREHA + + A G S V+AES+ARIFFRN++ G L EA++
Sbjct: 52 DIIVAGKNFGSGSSREHAVITIKALGVSCVIAESFARIFFRNAINNG---LLLIEAKV-- 106
Query: 192 ECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARKT 241
G +++I++ E+ +I T Y+ + D + +++AGG+ Y R +
Sbjct: 107 NAKNGSIISIDM-ENGII-KTEDSSYRFRSYPDFIMNIVNAGGLINYVRSS 155
>gi|332983284|ref|YP_004464725.1| 3-isopropylmalate dehydratase small subunit [Mahella australiensis
50-1 BON]
gi|332700962|gb|AEE97903.1| 3-isopropylmalate dehydratase, small subunit [Mahella australiensis
50-1 BON]
Length = 162
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/167 (38%), Positives = 97/167 (58%), Gaps = 21/167 (12%)
Query: 78 GDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYK---II 134
GDN+DTD IIPA YL S+PDE L + + L + K K K ++
Sbjct: 9 GDNVDTDVIIPARYLNT--SDPDE---LAGHCMEDLDPDF----------KAKAKPGDVM 53
Query: 135 IAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEECS 194
+AG NFGCGSSREHAP+A+ A+G S V+AES+ARIF+RN++ G P+ E +
Sbjct: 54 VAGRNFGCGSSREHAPIAIKASGVSCVIAESFARIFYRNAINIG--LPILECPEAAREIN 111
Query: 195 TGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
GD V +++A + + TTGK YK +P + + ++ + G+ Y ++
Sbjct: 112 DGDEVEVDVATGTITDITTGKTYKSQPFPEFMQQIMASDGLINYVKQ 158
>gi|304315507|ref|YP_003850654.1| 3-isopropylmalate dehydratase, small subunit [Methanothermobacter
marburgensis str. Marburg]
gi|302588966|gb|ADL59341.1| predicted 3-isopropylmalate dehydratase, small subunit
[Methanothermobacter marburgensis str. Marburg]
Length = 162
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 96/174 (55%), Gaps = 17/174 (9%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
G + D++DTD IIP YL + +P EKL + + GL + ++
Sbjct: 1 MKGRVWKFPDDVDTDIIIPGRYLVM--RDP---EKLREHVMEGLDPEFPSKV-------R 48
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
I+AG NFGCGSSREHAP+AL AG +AV+AES+ARIF+RN++ G PL +
Sbjct: 49 PGDFIVAGKNFGCGSSREHAPLALKGAGIAAVIAESFARIFYRNAINVG--IPLLEAPGI 106
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARKTG 242
+ + GD + +++ +I +E+ K + D + ++++GG+ Y RK G
Sbjct: 107 TGKLNEGDEIEVDLEMGVIIRGD--EEFPFKRLPDFMVEILESGGLIPYLRKKG 158
>gi|242279056|ref|YP_002991185.1| 3-isopropylmalate dehydratase small subunit [Desulfovibrio
salexigens DSM 2638]
gi|259494357|sp|C6BSH0.1|LEUD_DESAD RecName: Full=3-isopropylmalate dehydratase small subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|242121950|gb|ACS79646.1| 3-isopropylmalate dehydratase, small subunit [Desulfovibrio
salexigens DSM 2638]
Length = 164
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/172 (37%), Positives = 94/172 (54%), Gaps = 15/172 (8%)
Query: 69 TFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETK 128
+ G Y VG +IDTD IIPA +L V ++PDE LG+ + GL A + R
Sbjct: 2 SIKGTAYRVGAHIDTDAIIPARFL--VTTDPDE---LGANCMEGLEAGWIKRV------- 49
Query: 129 TKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEAR 188
K I++A NFGCGSSREHAP+++ AG VVA+S+ARIF+RN G I L
Sbjct: 50 KKNDIMVADENFGCGSSREHAPISILGAGIPVVVAKSFARIFYRNGFNMGLI--LLEVGD 107
Query: 189 LCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYAR 239
E+ GD + ++ + + N TTG+ P+ + ++D GG+ Y +
Sbjct: 108 DFEKLGDGDQLEVDAEKGEIKNVTTGETITCAPVPPFMKGILDCGGLVEYVK 159
>gi|257438584|ref|ZP_05614339.1| 3-isopropylmalate dehydratase, small subunit [Faecalibacterium
prausnitzii A2-165]
gi|257198953|gb|EEU97237.1| 3-isopropylmalate dehydratase, small subunit [Faecalibacterium
prausnitzii A2-165]
Length = 161
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 54/143 (37%), Positives = 83/143 (58%), Gaps = 14/143 (9%)
Query: 79 DNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKIIIAGG 138
DN+DTD IIPA +L N + ++L S+ + + + D + +++ G
Sbjct: 12 DNVDTDVIIPARHL-----NTQDPKELASHCMEDIDKDFVRNVRDGD-------VMVGGW 59
Query: 139 NFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEECSTGDV 198
NFGCGSSREHAPVA+ AAG S V+A+S+ARIF+RNS+ G P+ + S GD
Sbjct: 60 NFGCGSSREHAPVAIKAAGISVVIAKSFARIFYRNSINIG--LPIMECPEAVDAISAGDT 117
Query: 199 VTIEIAESRLINHTTGKEYKLKP 221
V+++ + + TTGK ++ +P
Sbjct: 118 VSVDFTTGLITDETTGKTFQAEP 140
>gi|392393556|ref|YP_006430158.1| 3-isopropylmalate dehydratase small subunit [Desulfitobacterium
dehalogenans ATCC 51507]
gi|390524634|gb|AFM00365.1| 3-isopropylmalate dehydratase, small subunit [Desulfitobacterium
dehalogenans ATCC 51507]
Length = 162
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 90/166 (54%), Gaps = 15/166 (9%)
Query: 75 YVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKII 134
+ GD+IDTD IIPA YL N + E L ++ + + E K +I
Sbjct: 5 WKFGDDIDTDVIIPARYL-----NQNTPEHLAAHCMEDADPNFA------QEVKPG-DVI 52
Query: 135 IAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEECS 194
I G NFGCGSSREHAP A+ AAG AV+A+SYARIF+RN++ G P+
Sbjct: 53 IGGKNFGCGSSREHAPAAIKAAGVKAVIADSYARIFYRNALNIG--MPILECPEAVRGIE 110
Query: 195 TGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYAR 239
GD V++++ +++N T E++ +P + +I AGG+ Y +
Sbjct: 111 AGDEVSVDLETGKIVNLTRNTEFEARPFPPFMQDLIKAGGLIPYVK 156
>gi|355572653|ref|ZP_09043741.1| 3-isopropylmalate dehydratase small subunit [Methanolinea tarda
NOBI-1]
gi|354824344|gb|EHF08596.1| 3-isopropylmalate dehydratase small subunit [Methanolinea tarda
NOBI-1]
Length = 164
Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/170 (39%), Positives = 95/170 (55%), Gaps = 24/170 (14%)
Query: 75 YVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKII 134
+ GDNIDTD IIP YL + D + L ++A G + + + II
Sbjct: 4 WKFGDNIDTDAIIPGRYLVIY----DPW-ALATHAFEGTRDEFA-------QNAREGDII 51
Query: 135 IAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEECS 194
+AG NFGCGSSREHAP+AL AG ++A S+ARIF+RN++ G I PL +C E
Sbjct: 52 VAGKNFGCGSSREHAPLALLGAGIRVIIARSFARIFYRNAINVG-ILPL-----VCPEAG 105
Query: 195 T---GDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
+ G VVTI + + + G++ ++P+ L +IDAGG+ YARK
Sbjct: 106 SIEDGAVVTINLDAGFI--ESGGRKMPIEPVPPFLKEIIDAGGLVGYARK 153
>gi|317153617|ref|YP_004121665.1| 3-isopropylmalate dehydratase small subunit [Desulfovibrio
aespoeensis Aspo-2]
gi|316943868|gb|ADU62919.1| 3-isopropylmalate dehydratase, small subunit [Desulfovibrio
aespoeensis Aspo-2]
Length = 163
Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/172 (37%), Positives = 96/172 (55%), Gaps = 19/172 (11%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G ++VGD+IDTD IIPA +L + LG+ + GL A + R + N+
Sbjct: 5 GTAHMVGDHIDTDAIIPARFLVTT-----DTATLGANCMEGLEAGWVKR-VKPND----- 53
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPL--DSEARL 189
II+AG NFGCGSSREHAP+++ AG VVA+S+ARIF+RN G + D AR+
Sbjct: 54 -IIVAGDNFGCGSSREHAPISILGAGIPVVVAKSFARIFYRNGFNMGLVLLEVGDDIARI 112
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
+ D + ++ A + N TTG E P+ + ++D GG+ YA++
Sbjct: 113 RDT----DRIEVDTATGVIRNLTTGDEITCAPVPPFMQNILDEGGLVEYAKR 160
>gi|288573964|ref|ZP_06392321.1| 3-isopropylmalate dehydratase, small subunit [Dethiosulfovibrio
peptidovorans DSM 11002]
gi|288569705|gb|EFC91262.1| 3-isopropylmalate dehydratase, small subunit [Dethiosulfovibrio
peptidovorans DSM 11002]
Length = 162
Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/169 (37%), Positives = 95/169 (56%), Gaps = 15/169 (8%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
G + GD++DTD IIPA YL V ++P E LG++ + + + +
Sbjct: 1 MRGKAWKFGDHVDTDVIIPARYL--VTADP---ETLGAHCMEDGDPDFAKKI-------S 48
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
+ III G NFGCGSSREHAP+A+ AG S V+A+S+ARIFFRNS+ G P+
Sbjct: 49 QGDIIIGGENFGCGSSREHAPIAIKGAGISCVIAKSFARIFFRNSINVG--LPIFVCPEA 106
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAY 237
E+ S GD VT ++ + + TTG+ + + + L +I AGG+ +
Sbjct: 107 AEKISQGDEVTADMEVGVISDETTGESWTVPAFPEYLRGIIAAGGLVPF 155
>gi|15643061|ref|NP_228104.1| 3-isopropylmalate dehydratase small subunit [Thermotoga maritima
MSB8]
gi|170288443|ref|YP_001738681.1| 3-isopropylmalate dehydratase small subunit [Thermotoga sp. RQ2]
gi|418046228|ref|ZP_12684322.1| 3-isopropylmalate dehydratase small subunit [Thermotoga maritima
MSB8]
gi|23396688|sp|Q9WYC8.1|LEUD1_THEMA RecName: Full=3-isopropylmalate dehydratase small subunit 1;
AltName: Full=Alpha-IPM isomerase 1; Short=IPMI 1;
AltName: Full=Isopropylmalate isomerase 1
gi|4980791|gb|AAD35380.1|AE001711_3 3-isopropylmalate dehydratase, small subunit, putative [Thermotoga
maritima MSB8]
gi|170175946|gb|ACB08998.1| 3-isopropylmalate dehydratase, small subunit [Thermotoga sp. RQ2]
gi|351675781|gb|EHA58941.1| 3-isopropylmalate dehydratase small subunit [Thermotoga maritima
MSB8]
Length = 166
Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/172 (37%), Positives = 89/172 (51%), Gaps = 15/172 (8%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + GDNI TD I P Y L + E+L + L + + K
Sbjct: 4 GRVWKFGDNISTDHIAPGRYFHL----RNNLEELAKHVLEDAMEDFAKKV-------QKG 52
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
II+AG NFG GSSREHA + AG S +VA+S+ARIF+RN++ G P+ E + +
Sbjct: 53 DIIVAGKNFGLGSSREHAARIIKIAGVSCIVAKSFARIFYRNAINVG--LPV-IELKEVD 109
Query: 192 ECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARKTG 242
E + GD + I++ L N TTGKEY+ PI L ++ GI Y +K G
Sbjct: 110 EINQGDELEIDLENGVLKNLTTGKEYRFTPIPKFLLEILKEDGIVNYLKKHG 161
>gi|167749681|ref|ZP_02421808.1| hypothetical protein EUBSIR_00639 [Eubacterium siraeum DSM 15702]
gi|167657304|gb|EDS01434.1| 3-isopropylmalate dehydratase, small subunit [Eubacterium siraeum
DSM 15702]
Length = 169
Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/172 (36%), Positives = 97/172 (56%), Gaps = 17/172 (9%)
Query: 71 HGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTK 130
HG + GDN+DTD IIPA YL N ++++L S+ + + + + + E +
Sbjct: 13 HGTVHKYGDNVDTDVIIPARYL-----NTADHKELASHCMEDIDKDFV-KNVKEGD---- 62
Query: 131 YKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG-EIYPLDSEARL 189
II+A NFGCGSSREHAP+A+ A+G S V+A ++ARIF+RN++ G I D A+
Sbjct: 63 --IIVANMNFGCGSSREHAPIAIKASGISCVIASTFARIFYRNAINIGLAILECDEAAKD 120
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
E G+ V ++ + N T G YK +P + + +I+ GG+ +K
Sbjct: 121 IE---NGNEVEVDFDTGVITNVTKGCTYKAEPFPEFIKDIINKGGLLNSLKK 169
>gi|222099365|ref|YP_002533933.1| 3-isopropylmalate dehydratase small subunit [Thermotoga neapolitana
DSM 4359]
gi|221571756|gb|ACM22568.1| 3-isopropylmalate dehydratase small subunit 1 [Thermotoga
neapolitana DSM 4359]
Length = 166
Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/172 (37%), Positives = 89/172 (51%), Gaps = 15/172 (8%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + GDNI TD I P Y L + E+L + L + + K
Sbjct: 4 GRVWKFGDNISTDHIAPGRYFHL----RNNLEELAKHVLEDAMEDFAKKV-------QKG 52
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
II+AG NFG GSSREHA + AG S +VA+S+ARIF+RN++ G P+ E + +
Sbjct: 53 DIIVAGKNFGLGSSREHAARIIKIAGVSCIVAKSFARIFYRNAINVG--LPV-IELKEVD 109
Query: 192 ECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARKTG 242
E + GD + I++ L N TTGKEY+ PI L ++ GI Y +K G
Sbjct: 110 EINQGDELEIDLENGVLKNLTTGKEYRFNPIPKFLLGILKEDGIVNYLKKHG 161
>gi|292654108|ref|YP_003534006.1| 3-isopropylmalate dehydratase small subunit [Haloferax volcanii
DS2]
gi|448289186|ref|ZP_21480359.1| 3-isopropylmalate dehydratase small subunit [Haloferax volcanii
DS2]
gi|291369815|gb|ADE02043.1| 3-isopropylmalate dehydratase small subunit 2 [Haloferax volcanii
DS2]
gi|445583013|gb|ELY37348.1| 3-isopropylmalate dehydratase small subunit [Haloferax volcanii
DS2]
Length = 176
Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 99/169 (58%), Gaps = 16/169 (9%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G +V GDNIDTDQI P+ ++ V S+PDE L ++A L ++ E+
Sbjct: 18 GRAWVFGDNIDTDQITPSRFI--VSSDPDE---LATHAFEDLRPEFS-------ESVEPG 65
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
++AG NFG GSSREH+P++L AG SAVVA+S+ARIFFRN++ G + A + E
Sbjct: 66 DFVVAGENFGSGSSREHSPLSLVGAGVSAVVAQSFARIFFRNAINLGLPVLICPGADVIE 125
Query: 192 ECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYAR 239
+ D + +++ + NHT + Y+ + + + L +++ GG+ AY +
Sbjct: 126 D---DDEIHVDLDAGVVTNHTRDETYEAEALPEFLQSLVEQGGLKAYTK 171
>gi|148269756|ref|YP_001244216.1| 3-isopropylmalate dehydratase small subunit [Thermotoga petrophila
RKU-1]
gi|281412349|ref|YP_003346428.1| 3-isopropylmalate dehydratase, small subunit [Thermotoga
naphthophila RKU-10]
gi|147735300|gb|ABQ46640.1| 3-isopropylmalate dehydratase, small subunit [Thermotoga petrophila
RKU-1]
gi|281373452|gb|ADA67014.1| 3-isopropylmalate dehydratase, small subunit [Thermotoga
naphthophila RKU-10]
Length = 166
Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/172 (37%), Positives = 89/172 (51%), Gaps = 15/172 (8%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + GDNI TD I P Y L + E+L + L + + K
Sbjct: 4 GRVWKFGDNISTDHIAPGRYFHL----RNNLEELAKHVLEDAMEDFAKKV-------QKG 52
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
II+AG NFG GSSREHA + AG S +VA+S+ARIF+RN++ G P+ E + +
Sbjct: 53 DIIVAGKNFGLGSSREHAARIIKIAGVSCIVAKSFARIFYRNAINVG--LPV-IELKEVD 109
Query: 192 ECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARKTG 242
E + GD + I++ L N TTGKEY+ PI L ++ GI Y +K G
Sbjct: 110 EINQGDELEIDLENGVLKNLTTGKEYRFTPIPKFLLEILKEDGIVNYLKKHG 161
>gi|217967579|ref|YP_002353085.1| 3-isopropylmalate dehydratase small subunit [Dictyoglomus turgidum
DSM 6724]
gi|217336678|gb|ACK42471.1| 3-isopropylmalate dehydratase, small subunit [Dictyoglomus turgidum
DSM 6724]
Length = 168
Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 95/172 (55%), Gaps = 15/172 (8%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
+ G GDNIDTD IIPA YL ++P E L + + L + + +++
Sbjct: 4 YKGKALKYGDNIDTDVIIPARYLN--TTDPKE---LAEHCMEDLDLNFKEKVKEKD---- 54
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
I++ G NFGCGSSREHAP+A+ A+G ++A+S+ARIF+RN++ G P+ +
Sbjct: 55 ---ILVVGENFGCGSSREHAPIAIKASGVKCIIAKSFARIFYRNAINIG--LPILEISEA 109
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDL-GPVIDAGGIFAYARK 240
+ + GD + ++ + L N TTG+ + P L +I GG+ +AR+
Sbjct: 110 VDRINEGDELEVDFDKGVLKNLTTGETFTTFPFPPLIQEIIKKGGLINFARE 161
>gi|345016464|ref|YP_004818817.1| 3-isopropylmalate dehydratase small subunit [Thermoanaerobacter
wiegelii Rt8.B1]
gi|344031807|gb|AEM77533.1| 3-isopropylmalate dehydratase small subunit [Thermoanaerobacter
wiegelii Rt8.B1]
Length = 160
Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 92/164 (56%), Gaps = 15/164 (9%)
Query: 78 GDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKIIIAG 137
GDNIDTD IIPA YL S+P E L + + L + + + E + I++ G
Sbjct: 9 GDNIDTDVIIPARYLN--TSDPQE---LAQHCMEDLDKEFKNK-VQEGD------ILVVG 56
Query: 138 GNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEECSTGD 197
NFG GSSREHAP+A+ A+G S ++A+S+ARIFFRN++ G P+ + GD
Sbjct: 57 ENFGSGSSREHAPIAIKASGISCIIAKSFARIFFRNAINIG--LPILECKEAVDGIEEGD 114
Query: 198 VVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
+V ++ + N + G ++K +P D + ++ GG+ Y R+
Sbjct: 115 IVLVDTDNGIIKNLSKGTQFKAQPFPDFIKEIMKYGGLINYVRE 158
>gi|403252896|ref|ZP_10919201.1| 3-isopropylmalate dehydratase small subunit [Thermotoga sp. EMP]
gi|402811658|gb|EJX26142.1| 3-isopropylmalate dehydratase small subunit [Thermotoga sp. EMP]
Length = 166
Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/172 (37%), Positives = 89/172 (51%), Gaps = 15/172 (8%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + GDNI TD I P Y L + E+L + L + + K
Sbjct: 4 GRVWKFGDNISTDHIAPGRYFHL----RNNLEELAKHVLEDAMEDFAKKV-------QKG 52
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
II+AG NFG GSSREHA + AG S +VA+S+ARIF+RN++ G P+ E + +
Sbjct: 53 DIIVAGKNFGLGSSREHAARIIKIAGVSCIVAKSFARIFYRNAINVG--LPV-IELKEVD 109
Query: 192 ECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARKTG 242
E + GD + I++ L N TTGKEY+ PI L ++ GI Y +K G
Sbjct: 110 EINQGDELEIDLENGILKNLTTGKEYRFTPIPKFLLEILKEDGIVNYLKKHG 161
>gi|150400110|ref|YP_001323877.1| 3-isopropylmalate dehydratase, small subunit [Methanococcus
vannielii SB]
gi|150012813|gb|ABR55265.1| 3-isopropylmalate dehydratase, small subunit [Methanococcus
vannielii SB]
Length = 161
Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/172 (37%), Positives = 95/172 (55%), Gaps = 19/172 (11%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
G +V D++DTD IIP YL D YE L S+ + G IDEN K
Sbjct: 3 LKGKAHVFSDDVDTDAIIPGAYL----RTTDVYE-LASHCMAG---------IDENFPKK 48
Query: 130 KY--KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEA 187
I+AG NFGCGSSRE AP+++ G SA++AES+ARIF+RNS+ G I P++ +
Sbjct: 49 VNLGDFIVAGENFGCGSSREQAPISIKYLGISAIIAESFARIFYRNSINLGVI-PIECK- 106
Query: 188 RLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLGPVIDAGGIFAYAR 239
+ + TGD++ +++ ++I E + P G +ID GG+ YA+
Sbjct: 107 NISKHVKTGDLIELDLENKKIILKDIVLECTV-PTGKAKEIIDLGGLINYAK 157
>gi|410467226|ref|ZP_11319406.1| 3-isopropylmalate dehydratase, small subunit [Desulfovibrio
magneticus str. Maddingley MBC34]
gi|409980653|gb|EKO37366.1| 3-isopropylmalate dehydratase, small subunit [Desulfovibrio
magneticus str. Maddingley MBC34]
Length = 165
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 64/171 (37%), Positives = 95/171 (55%), Gaps = 15/171 (8%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
+HG + VG +IDTD IIPA +L V ++P E LG+ + GL A + + + +
Sbjct: 2 YHGTAHTVGAHIDTDAIIPARFL--VTTDPAE---LGANCMEGLEAGWIKKVKNGD---- 52
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
I++AG NFGCGSSREHAPVAL AG V+A S+ARIF+RN G + L
Sbjct: 53 ---IMVAGENFGCGSSREHAPVALLGAGIPVVIAHSFARIFYRNGFNMGLV--LLEIGDD 107
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYAR 239
+ GD + ++ + N TTG+ + KP+ + ++D GG+ Y +
Sbjct: 108 VSKIHDGDELKVDADTGVINNVTTGQTIQCKPVPTFMKGILDKGGLIPYVQ 158
>gi|254974539|ref|ZP_05271011.1| 3-isopropylmalate dehydratase small subunit [Clostridium difficile
QCD-66c26]
gi|255091927|ref|ZP_05321405.1| 3-isopropylmalate dehydratase small subunit [Clostridium difficile
CIP 107932]
gi|255313662|ref|ZP_05355245.1| 3-isopropylmalate dehydratase small subunit [Clostridium difficile
QCD-76w55]
gi|255516346|ref|ZP_05384022.1| 3-isopropylmalate dehydratase small subunit [Clostridium difficile
QCD-97b34]
gi|255649446|ref|ZP_05396348.1| 3-isopropylmalate dehydratase small subunit [Clostridium difficile
QCD-37x79]
gi|260682612|ref|YP_003213897.1| 3-isopropylmalate dehydratase small subunit [Clostridium difficile
CD196]
gi|260686212|ref|YP_003217345.1| 3-isopropylmalate dehydratase small subunit [Clostridium difficile
R20291]
gi|306519523|ref|ZP_07405870.1| 3-isopropylmalate dehydratase small subunit [Clostridium difficile
QCD-32g58]
gi|384360193|ref|YP_006198045.1| 3-isopropylmalate dehydratase small subunit [Clostridium difficile
BI1]
gi|260208775|emb|CBA61649.1| 3-isopropylmalate dehydratase small subunit [Clostridium difficile
CD196]
gi|260212228|emb|CBE02936.1| 3-isopropylmalate dehydratase small subunit [Clostridium difficile
R20291]
Length = 163
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 55/151 (36%), Positives = 83/151 (54%), Gaps = 14/151 (9%)
Query: 71 HGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTK 130
+G + GDNIDTD IIPA YL + +Y++L ++ + + + ++ K
Sbjct: 4 NGSVFKFGDNIDTDVIIPARYLNIA-----DYKELATHCMEDIDDKFISKV-------KK 51
Query: 131 YKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLC 190
II+A NFGCGSSREHAP+ + +G S V+A ++ARIFFRNS+ G P+
Sbjct: 52 GDIIVATKNFGCGSSREHAPIVIKESGVSCVIASTFARIFFRNSINIG--LPILECEEAA 109
Query: 191 EECSTGDVVTIEIAESRLINHTTGKEYKLKP 221
GD + ++ + + N T KEYK +P
Sbjct: 110 NNIDEGDNIEVDFSTGVIKNITKEKEYKAEP 140
>gi|333895878|ref|YP_004469752.1| 3-isopropylmalate dehydratase small subunit [Thermoanaerobacterium
xylanolyticum LX-11]
gi|333111143|gb|AEF16080.1| 3-isopropylmalate dehydratase small subunit [Thermoanaerobacterium
xylanolyticum LX-11]
Length = 161
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 93/164 (56%), Gaps = 15/164 (9%)
Query: 78 GDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKIIIAG 137
GDN+DTD IIPA +L S+P E L ++ + L ++ R I++AG
Sbjct: 9 GDNVDTDVIIPARFLNT--SDPKE---LAAHCMEDLDKSFKDRV-------KPGDIMVAG 56
Query: 138 GNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEECSTGD 197
NFGCGSSREHAP+A+ +G S V+A+S+ARIF+RN++ G P+ GD
Sbjct: 57 DNFGCGSSREHAPIAIKESGISCVIAKSFARIFYRNAINIG--LPILECPEAASSIEDGD 114
Query: 198 VVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
+V+++ + + T G E+K +P + + +I+ GG+ Y ++
Sbjct: 115 IVSVDFETGVIKDITKGIEFKSQPFPEFIKRIIECGGLVNYVKE 158
>gi|239906237|ref|YP_002952977.1| 3-isopropylmalate dehydratase small subunit [Desulfovibrio
magneticus RS-1]
gi|239796102|dbj|BAH75091.1| 3-isopropylmalate dehydratase small subunit [Desulfovibrio
magneticus RS-1]
Length = 165
Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 94/171 (54%), Gaps = 15/171 (8%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
+HG + VG +IDTD IIPA +L V ++P E LG+ + GL A + +
Sbjct: 2 YHGTAHTVGAHIDTDAIIPARFL--VTTDPAE---LGANCMEGLEAGWIKKV-------K 49
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
+ I++AG NFGCGSSREHAP+AL AG V+A S+ARIF+RN G + L
Sbjct: 50 QGDIMVAGENFGCGSSREHAPIALLGAGIPVVIAHSFARIFYRNGFNMGLV--LLEIGDD 107
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYAR 239
+ GD + ++ + N TTG+ + KP+ + ++D GG+ Y +
Sbjct: 108 VSKIHDGDELKVDADTGVISNVTTGQTIQCKPVPPFMKGILDKGGLIPYVQ 158
>gi|347524161|ref|YP_004781731.1| 3-isopropylmalate dehydratase, small subunit [Pyrolobus fumarii 1A]
gi|343461043|gb|AEM39479.1| 3-isopropylmalate dehydratase, small subunit [Pyrolobus fumarii 1A]
Length = 174
Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 98/175 (56%), Gaps = 17/175 (9%)
Query: 71 HGLCYVVGDNIDTDQIIPAEY--LTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETK 128
G +GD+I+TD IIP +Y TL P ++L + GL R +
Sbjct: 8 RGRAIRLGDDINTDFIIPYQYKARTLDP------KELAKHVFEGLDPELPKRIRPGD--- 58
Query: 129 TKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEAR 188
I++AG NFG GSSRE AP+A+ AAG AV+AES+ARIF+RN++ G I +++ +
Sbjct: 59 ----IVVAGKNFGYGSSREQAPLAIKAAGIQAVIAESFARIFYRNAINLGLIV-VEAPRK 113
Query: 189 LCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARKTG 242
+ TGD V + + E + N + G E +KP+ + + +++AGG+ Y +K G
Sbjct: 114 FIDSVETGDTVEVRLEEGVVRNVSKGVEASVKPLPEFVRRIVEAGGLAGYLKKHG 168
>gi|150403299|ref|YP_001330593.1| 3-isopropylmalate dehydratase, small subunit [Methanococcus
maripaludis C7]
gi|150034329|gb|ABR66442.1| 3-isopropylmalate dehydratase, small subunit [Methanococcus
maripaludis C7]
Length = 161
Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 95/169 (56%), Gaps = 15/169 (8%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G ++ GD++DTD IIP YL DEYE L S+ + G+ + ++E +
Sbjct: 5 GKVHLFGDDVDTDAIIPGAYL----KTTDEYE-LASHCMAGIDEDFP-EMVEEGD----- 53
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
++AG NFGCGSSRE AP+A+ G A++ ES+ARIF+RN + G ++P++ + + +
Sbjct: 54 -FLVAGENFGCGSSREQAPIAIKYCGIKAIIVESFARIFYRNCINLG-VFPIECKG-ISK 110
Query: 192 ECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLGPVIDAGGIFAYARK 240
GD + +++ ++I T L P G ++D GG+ YA+K
Sbjct: 111 HVKDGDSIELDLENKKVILKDTVLNCHL-PTGTAKEIMDEGGLINYAKK 158
>gi|419720283|ref|ZP_14247526.1| 3-isopropylmalate dehydratase, small subunit [Lachnoanaerobaculum
saburreum F0468]
gi|383303651|gb|EIC95093.1| 3-isopropylmalate dehydratase, small subunit [Lachnoanaerobaculum
saburreum F0468]
Length = 163
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 59/167 (35%), Positives = 93/167 (55%), Gaps = 15/167 (8%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + G+N+DTD IIPA YL N E+L + + + + + K
Sbjct: 5 GHVFKYGENVDTDVIIPARYL-----NATTGEELAKHCMEDIDKDFVNKV-------HKG 52
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
II+A NFGCGSSREHAP+A+ ++G S V+A+++ARIF+RN++ G P+ +
Sbjct: 53 DIIVARKNFGCGSSREHAPLAIKSSGVSVVIADTFARIFYRNAINIG--LPIIESPQAAA 110
Query: 192 ECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAY 237
E + GD V ++ + + TTGK YK + + + +I+AGG+ Y
Sbjct: 111 EINEGDDVKVDFDTGIITDITTGKTYKGQAFPEFMQNIINAGGLINY 157
>gi|289524276|ref|ZP_06441130.1| 3-isopropylmalate dehydratase, small subunit [Anaerobaculum
hydrogeniformans ATCC BAA-1850]
gi|289502448|gb|EFD23612.1| 3-isopropylmalate dehydratase, small subunit [Anaerobaculum
hydrogeniformans ATCC BAA-1850]
Length = 165
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 92/163 (56%), Gaps = 15/163 (9%)
Query: 78 GDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKIIIAG 137
GD++DTD IIP YL++ ++P E L + + G+ + + K I++AG
Sbjct: 11 GDHVDTDVIIPGVYLSI--TDPRE---LAKHCMEGVDPDFPKKV-------KKGDILVAG 58
Query: 138 GNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEECSTGD 197
NFGCGSSREHAP+AL G AVVA+S+A IF+RN++ G PL + +E D
Sbjct: 59 INFGCGSSREHAPIALKECGVGAVVAKSFAAIFYRNAINIG--LPLVECSDAVDEIDEND 116
Query: 198 VVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYAR 239
+ I++ L N T GK YK+ P+ + + ++ GG+ Y +
Sbjct: 117 EIEIDMELGELKNITKGKRYKITPLPESIKNILGLGGLIEYVK 159
>gi|448541925|ref|ZP_21624549.1| 3-isopropylmalate dehydratase small subunit [Haloferax sp. ATCC
BAA-646]
gi|448552536|ref|ZP_21630120.1| 3-isopropylmalate dehydratase small subunit [Haloferax sp. ATCC
BAA-645]
gi|448553328|ref|ZP_21630302.1| 3-isopropylmalate dehydratase small subunit [Haloferax sp. ATCC
BAA-644]
gi|445707804|gb|ELZ59657.1| 3-isopropylmalate dehydratase small subunit [Haloferax sp. ATCC
BAA-646]
gi|445708707|gb|ELZ60546.1| 3-isopropylmalate dehydratase small subunit [Haloferax sp. ATCC
BAA-645]
gi|445720470|gb|ELZ72143.1| 3-isopropylmalate dehydratase small subunit [Haloferax sp. ATCC
BAA-644]
Length = 177
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 98/169 (57%), Gaps = 16/169 (9%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G +V GDNIDTDQI P+ ++ V S+PDE L ++A L ++ E+
Sbjct: 19 GRAWVFGDNIDTDQITPSRFI--VSSDPDE---LATHAFEDLRPEFS-------ESVETG 66
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
++AG NFG GSSREH+P++L AG SAVVA+S+ARIFFRN++ G + A E
Sbjct: 67 DFVVAGENFGSGSSREHSPLSLVGAGVSAVVAQSFARIFFRNAINLGLPVLICPGADAIE 126
Query: 192 ECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYAR 239
+ GD + +++ + NHT + Y+ + + + L +++ GG+ Y +
Sbjct: 127 D---GDEIHVDLDAGAVTNHTRDETYEAEALPEFLQSLVERGGLKPYTK 172
>gi|331083905|ref|ZP_08333014.1| 3-isopropylmalate dehydratase small subunit [Lachnospiraceae
bacterium 6_1_63FAA]
gi|330403330|gb|EGG82890.1| 3-isopropylmalate dehydratase small subunit [Lachnospiraceae
bacterium 6_1_63FAA]
Length = 162
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 91/171 (53%), Gaps = 15/171 (8%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + GDN+DTD IIPA YL N + E+L ++ + + + K
Sbjct: 5 GNAFKYGDNVDTDVIIPARYL-----NSSKAEELAAHCMEDIDKNFVKEV-------KKG 52
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
I+ A NFGCGSSREHAP+A+ AAG S V+AE++ARIF+RN++ G P+
Sbjct: 53 DILAANKNFGCGSSREHAPMAIKAAGISCVIAETFARIFYRNAINIG--LPIVECPEAAR 110
Query: 192 ECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARKT 241
+ GD V ++ + N + KEY ++P + + +I+A G+ Y K
Sbjct: 111 DIEKGDEVEVDFDNGIIRNLSKEKEYPIQPFPEFMQRIIEAEGLVNYIIKN 161
>gi|312879412|ref|ZP_07739212.1| 3-isopropylmalate dehydratase, small subunit [Aminomonas
paucivorans DSM 12260]
gi|310782703|gb|EFQ23101.1| 3-isopropylmalate dehydratase, small subunit [Aminomonas
paucivorans DSM 12260]
Length = 171
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 62/172 (36%), Positives = 91/172 (52%), Gaps = 15/172 (8%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
G +V GD++DTD IIPA YLT+ S P E L + + L +T+ +
Sbjct: 5 LEGNAWVYGDHVDTDVIIPARYLTV--STP---EALAPHCMEDLDSTFAG-------SVR 52
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
+I+ G NFGCGSSREHAP+A+ S VVA S+ARIFFRN++ G P+
Sbjct: 53 PGDVIVGGANFGCGSSREHAPLAIQGTQVSCVVAASFARIFFRNALNVG--LPILECPEG 110
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
GD + ++ + N T G+ Y ++P L +++AGG+ Y R+
Sbjct: 111 AARIRKGDRLRVDPQGGTIENQTRGESYPVRPFPPFLADLVEAGGLVPYVRR 162
>gi|336432116|ref|ZP_08611956.1| 3-isopropylmalate dehydratase small subunit [Lachnospiraceae
bacterium 2_1_58FAA]
gi|336019560|gb|EGN49284.1| 3-isopropylmalate dehydratase small subunit [Lachnospiraceae
bacterium 2_1_58FAA]
Length = 163
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 92/168 (54%), Gaps = 15/168 (8%)
Query: 71 HGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTK 130
G + GDN+DTD IIPA YL N + ++L S+A+ + + +
Sbjct: 4 QGHVFKYGDNVDTDVIIPARYL-----NSFDAKELASHAMADIDPEFAKKV-------QA 51
Query: 131 YKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLC 190
+I+A NFGCGSSREHAP+ L AG S V+AE++ARIF+RN++ G P+ +
Sbjct: 52 GDLIVAKKNFGCGSSREHAPLCLKTAGVSCVIAETFARIFYRNAINIG--LPIIECPQAA 109
Query: 191 EECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAY 237
+E GD V ++ + + T G +Y+ + + + +I AGG+ +Y
Sbjct: 110 QEIEAGDEVEVDFDSGMIYDRTKGTQYQGQAFPEFMQKLIAAGGLVSY 157
>gi|154505822|ref|ZP_02042560.1| hypothetical protein RUMGNA_03362 [Ruminococcus gnavus ATCC 29149]
gi|153793840|gb|EDN76260.1| 3-isopropylmalate dehydratase small subunit [Ruminococcus gnavus
ATCC 29149]
Length = 167
Score = 100 bits (248), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 92/168 (54%), Gaps = 15/168 (8%)
Query: 71 HGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTK 130
G + GDN+DTD IIPA YL N + ++L S+A+ + + +
Sbjct: 4 QGHVFKYGDNVDTDVIIPARYL-----NSFDAKELASHAMADIDPEFAKKV-------QA 51
Query: 131 YKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLC 190
+I+A NFGCGSSREHAP+ L AG S V+AE++ARIF+RN++ G P+ +
Sbjct: 52 GDLIVAKKNFGCGSSREHAPLCLKTAGVSCVIAETFARIFYRNAINIG--LPIIECPQAA 109
Query: 191 EECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAY 237
+E GD V ++ + + T G +Y+ + + + +I AGG+ +Y
Sbjct: 110 QEIEAGDEVEVDFDSGMIYDRTKGTQYQGQAFPEFMQKLIAAGGLVSY 157
>gi|317131902|ref|YP_004091216.1| 3-isopropylmalate dehydratase small subunit [Ethanoligenens
harbinense YUAN-3]
gi|315469881|gb|ADU26485.1| 3-isopropylmalate dehydratase, small subunit [Ethanoligenens
harbinense YUAN-3]
Length = 163
Score = 100 bits (248), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 58/147 (39%), Positives = 85/147 (57%), Gaps = 14/147 (9%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + G+N+DTD IIPA YL S+P E L S+ + + T+ R KT
Sbjct: 5 GTVFKYGNNVDTDVIIPARYLN--SSDPKE---LASHCMEDIDQTFVKR------VKTG- 52
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
II+ G NFGCGSSREHAP+A+ AG S V+A ++ARIF+RNS+ G P+ E
Sbjct: 53 DIIVGGKNFGCGSSREHAPLAIKTAGVSCVIAATFARIFYRNSINIG--LPIIECPEASE 110
Query: 192 ECSTGDVVTIEIAESRLINHTTGKEYK 218
+ GD V ++ ++++ TTG+ ++
Sbjct: 111 KIKDGDEVEVDFDTGKIVDKTTGETFQ 137
>gi|304315553|ref|YP_003850698.1| 3-isopropylmalate dehydratase, small subunit [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302777055|gb|ADL67614.1| 3-isopropylmalate dehydratase, small subunit [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 161
Score = 100 bits (248), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 62/167 (37%), Positives = 97/167 (58%), Gaps = 21/167 (12%)
Query: 78 GDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYK---II 134
GDN+DTD IIPA +L S+P E A++ ID++ K+K K I+
Sbjct: 9 GDNVDTDVIIPARFLNT--SDPKEL------------ASHCMEDIDKD-FKSKVKPGDIM 53
Query: 135 IAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEECS 194
IAG NFGCGSSREHAP+A+ +G S V+A+S+ARIF+RN++ G P+
Sbjct: 54 IAGYNFGCGSSREHAPIAIKESGISCVIAKSFARIFYRNAINIG--LPILECPDAASAIE 111
Query: 195 TGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
GD+V++++ + + T G E+K +P + + +I+ GG+ Y ++
Sbjct: 112 DGDMVSVDLETGIIKDITKGIEFKSQPFPEFIKKIIECGGLINYVKE 158
>gi|220903784|ref|YP_002479096.1| 3-isopropylmalate dehydratase small subunit [Desulfovibrio
desulfuricans subsp. desulfuricans str. ATCC 27774]
gi|259494359|sp|B8J4G0.1|LEUD_DESDA RecName: Full=3-isopropylmalate dehydratase small subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|219868083|gb|ACL48418.1| 3-isopropylmalate dehydratase, small subunit [Desulfovibrio
desulfuricans subsp. desulfuricans str. ATCC 27774]
Length = 165
Score = 100 bits (248), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 93/173 (53%), Gaps = 15/173 (8%)
Query: 69 TFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETK 128
+ G + VG++IDTD IIPA +L + +KLG + GL ++ +R +
Sbjct: 2 NYKGKAHKVGEHIDTDAIIPARFLVTT-----DAQKLGENCMSGLEPSWASRVAPGD--- 53
Query: 129 TKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEAR 188
I++AG NFGCGSSREHAP+A+ AG V+ S+ARIF+RN+ G + L
Sbjct: 54 ----IMVAGRNFGCGSSREHAPIAILGAGMPVVIGHSFARIFYRNAFNMGLL--LMEVGD 107
Query: 189 LCEECSTGDVVTIEIAESRLINHTTGKEYKLKPI-GDLGPVIDAGGIFAYARK 240
++ S GD + I+ + + N TTG E P+ + ++ GG+ Y ++
Sbjct: 108 EVDKISDGDALEIDASTGAIRNLTTGAEITCPPLPASMAAILAKGGLVGYVKE 160
>gi|11499350|ref|NP_070589.1| 3-isopropylmalate dehydratase small subunit [Archaeoglobus fulgidus
DSM 4304]
gi|3122335|sp|O28513.1|LEUD2_ARCFU RecName: Full=3-isopropylmalate dehydratase small subunit 2;
AltName: Full=Alpha-IPM isomerase 2; Short=IPMI 2;
AltName: Full=Isopropylmalate isomerase 2
gi|2648789|gb|AAB89489.1| 3-isopropylmalate dehydratase, small subunit (leuD-2)
[Archaeoglobus fulgidus DSM 4304]
Length = 165
Score = 100 bits (248), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 97/175 (55%), Gaps = 18/175 (10%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + GD+I TD I P Y L + P+ L + + + +F +
Sbjct: 5 GRAWKFGDDISTDHITPGRYYHLRSNMPE----LAKHVMEDADPDFMKKFRPGD------ 54
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG-EIYPLDSEARLC 190
I+AG NFG GSSREHAP+AL AG SAV+A+S+ARIF+RN++ G + D+++
Sbjct: 55 -FIVAGKNFGMGSSREHAPLALKIAGVSAVIAKSFARIFYRNAINVGLPVLIADTDS--- 110
Query: 191 EECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARKTGMI 244
+GD + +++ + ++N T G E ++KPI + + ++ GG+ +Y +K G I
Sbjct: 111 --IDSGDELEVDLGKGLVVNRTKGIEIRVKPIPEVMLKILHEGGLVSYVKKHGDI 163
>gi|390933687|ref|YP_006391192.1| 3-isopropylmalate dehydratase small subunit [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
gi|389569188|gb|AFK85593.1| 3-isopropylmalate dehydratase small subunit [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
Length = 161
Score = 100 bits (248), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 95/167 (56%), Gaps = 21/167 (12%)
Query: 78 GDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYK---II 134
GDN+DTD IIPA +L S+P E L ++ + L ++ K K K I+
Sbjct: 9 GDNVDTDVIIPARFLNT--SDPKE---LAAHCMEDLDKSF----------KDKVKPGDIM 53
Query: 135 IAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEECS 194
+AG NFGCGSSREHAP+A+ +G S V+A+S+ARIF+RN++ G P+
Sbjct: 54 VAGDNFGCGSSREHAPIAIKESGISCVIAKSFARIFYRNAINIG--LPILECPDAASSIE 111
Query: 195 TGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
GD+V+++ + + T G E+K +P + + +I+ GG+ Y ++
Sbjct: 112 DGDIVSVDFETGVIKDITKGIEFKSQPFPEFIKKIIECGGLINYVKE 158
>gi|154151615|ref|YP_001405233.1| 3-isopropylmalate dehydratase small subunit [Methanoregula boonei
6A8]
gi|154000167|gb|ABS56590.1| 3-isopropylmalate dehydratase, small subunit [Methanoregula boonei
6A8]
Length = 165
Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 66/170 (38%), Positives = 98/170 (57%), Gaps = 26/170 (15%)
Query: 75 YVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKII 134
+ GDNIDTD IIP +LTL ++ + L +A G TR DE K K +
Sbjct: 4 WKFGDNIDTDAIIPGRFLTL-----NDAKDLAKHAFEG------TR--DEFAKKVKAGDV 50
Query: 135 IAGG-NFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEE- 192
+ GG NFGCGSSREHAP+AL G + V+A+S+ARIFFRN++ TG + P+ +C E
Sbjct: 51 VVGGKNFGCGSSREHAPLALLGNGVTVVLAQSFARIFFRNAINTG-VLPI-----VCPET 104
Query: 193 --CSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYAR 239
+ G +T+ I + + G+ + ++P+ + +IDAGG+ YA+
Sbjct: 105 DRIADGAKITVNIKKGYI--EADGERFAIEPVPPFMQGIIDAGGLVEYAK 152
>gi|116750410|ref|YP_847097.1| 3-isopropylmalate dehydratase small subunit [Syntrophobacter
fumaroxidans MPOB]
gi|116750452|ref|YP_847139.1| 3-isopropylmalate dehydratase small subunit [Syntrophobacter
fumaroxidans MPOB]
gi|116699474|gb|ABK18662.1| 3-isopropylmalate dehydratase, small subunit [Syntrophobacter
fumaroxidans MPOB]
gi|116699516|gb|ABK18704.1| 3-isopropylmalate dehydratase, small subunit [Syntrophobacter
fumaroxidans MPOB]
Length = 165
Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 95/171 (55%), Gaps = 15/171 (8%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + GD++DTD IIPA YL + S+P + L + + F+ + +
Sbjct: 5 GKAWRFGDDVDTDAIIPARYL--ISSDP---KFLAGHCM----EDADPEFVKKAKAG--- 52
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
II+AG NFGCGSSREHAPV++ AAG S V+A S+ARIF+RN+ G + +A
Sbjct: 53 DIIVAGKNFGCGSSREHAPVSIKAAGLSCVIAHSFARIFYRNAFNMGLLILESPDA--AA 110
Query: 192 ECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARKT 241
TGD + +++ ++N TTG++Y P+ + ++ GG+ Y R+
Sbjct: 111 AVRTGDELEVDVDRGIILNLTTGEQYHTHPVPPFMQELLRVGGLMPYVREQ 161
>gi|302391006|ref|YP_003826826.1| 3-isopropylmalate dehydratase small subunit [Acetohalobium
arabaticum DSM 5501]
gi|302203083|gb|ADL11761.1| 3-isopropylmalate dehydratase, small subunit [Acetohalobium
arabaticum DSM 5501]
Length = 164
Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 95/169 (56%), Gaps = 15/169 (8%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
G + GD++DTD IIPA YL S P+E L + L L + +
Sbjct: 3 LKGQAWKYGDDVDTDVIIPARYLN--TSKPEE---LAKHCLEDLDEDFVDKM-------K 50
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
+ +I+A NFGCGSSREHAP+A+ AAG S V+A+S+ARIF+RN++ G + L+SEA +
Sbjct: 51 QGDMIVAEKNFGCGSSREHAPLAIKAAGVSCVIAKSFARIFYRNAINIG-LPILESEAAV 109
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAY 237
+ D V +++ + N T + Y+ +P + + +I AGG+ Y
Sbjct: 110 -DGIGIEDEVEVDVESGEIKNLTKDEVYQAEPFPEFMQNIIQAGGLINY 157
>gi|160940442|ref|ZP_02087787.1| hypothetical protein CLOBOL_05332 [Clostridium bolteae ATCC
BAA-613]
gi|158437022|gb|EDP14789.1| hypothetical protein CLOBOL_05332 [Clostridium bolteae ATCC
BAA-613]
Length = 161
Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 65/170 (38%), Positives = 90/170 (52%), Gaps = 21/170 (12%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + GDN+DTD IIPA YL N + ++L + + + + + K
Sbjct: 5 GHVFKYGDNVDTDVIIPARYL-----NATQGDELAKHCMEDIDKEFVNQV-------QKG 52
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG-EIYPLDSEARLC 190
II+A NFGCGSSREHAP+A+ AG S V+AE++ARIF+RNS+ G I S AR
Sbjct: 53 DIIVANKNFGCGSSREHAPLAIKCAGVSCVIAETFARIFYRNSINIGLPIIECGSAARSI 112
Query: 191 EECSTGDVVTIEIAESRLINHTTGKEYK---LKPIGDLGPVIDAGGIFAY 237
E GD V ++ + N T G+ YK P + +I AGG+ Y
Sbjct: 113 E---AGDEVEVDFDSGIITNKTKGETYKGQSFPPF--MQKIISAGGLVNY 157
>gi|404372574|ref|ZP_10977869.1| 3-isopropylmalate dehydratase small subunit [Clostridium sp.
7_2_43FAA]
gi|226911289|gb|EEH96490.1| 3-isopropylmalate dehydratase small subunit [Clostridium sp.
7_2_43FAA]
Length = 170
Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 92/169 (54%), Gaps = 15/169 (8%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + GDN+DTD IIPA YL S+P E L + + + + +T + K
Sbjct: 5 GRVFKYGDNVDTDVIIPARYLNT--SDPKE---LAMHCMEDIDSDFTKKV-------EKG 52
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
II+A NFGCGSSREHAP+A+ +G S V+A ++ARIF+RN++ G P+ +
Sbjct: 53 DIIVANKNFGCGSSREHAPIAIKESGVSCVIASTFARIFYRNAINIG--LPIIECEEAVK 110
Query: 192 ECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYAR 239
GD + I+ + N + +EYK +P + + +I++ G+ Y +
Sbjct: 111 SIDAGDELEIDFTTGVINNKSKKQEYKGEPFPEFMQKIINSNGLVNYIK 159
>gi|432330201|ref|YP_007248344.1| 3-isopropylmalate dehydratase, small subunit [Methanoregula
formicicum SMSP]
gi|432136910|gb|AGB01837.1| 3-isopropylmalate dehydratase, small subunit [Methanoregula
formicicum SMSP]
Length = 184
Score = 99.8 bits (247), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 70/167 (41%), Positives = 99/167 (59%), Gaps = 20/167 (11%)
Query: 75 YVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKII 134
+ GD+IDTD IIP +LT+ +NPDE L +A G TR DE K K +
Sbjct: 26 WKFGDDIDTDAIIPGRFLTI--NNPDE---LAKHAFEG------TR--DEYAKKVKPGDV 72
Query: 135 IAGG-NFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEEC 193
I GG NFGCGSSREHAP+AL G VVA+S+ARIFFRNSV G + + +A ++
Sbjct: 73 IVGGRNFGCGSSREHAPLALVGGGVKVVVAQSFARIFFRNSVNVGVLPVVCPDA---DKI 129
Query: 194 STGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYAR 239
+ G + ++I E + K+Y ++P+ + + +IDAGG+ YA+
Sbjct: 130 ADGAAIRLDIKEGFI--EADNKKYAIEPVPEFMQGIIDAGGLVEYAK 174
>gi|332800218|ref|YP_004461717.1| 3-isopropylmalate dehydratase small subunit [Tepidanaerobacter
acetatoxydans Re1]
gi|438003545|ref|YP_007273288.1| 3-isopropylmalate dehydratase small subunit [Tepidanaerobacter
acetatoxydans Re1]
gi|332697953|gb|AEE92410.1| 3-isopropylmalate dehydratase small subunit [Tepidanaerobacter
acetatoxydans Re1]
gi|432180339|emb|CCP27312.1| 3-isopropylmalate dehydratase small subunit [Tepidanaerobacter
acetatoxydans Re1]
Length = 173
Score = 99.8 bits (247), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 93/164 (56%), Gaps = 15/164 (9%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G +V +NIDTDQI P YL LV +P + K + + G T+ R +
Sbjct: 7 GKAFVYNNNIDTDQIYPGRYLELV--DPKDIAK---HCMEGADPTFVERM-------SYG 54
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
II+AG NFGCGSSREHA +AL +AG S V+AES+ARIFFRNS+ PL + +
Sbjct: 55 DIIVAGTNFGCGSSREHAVIALISAGVSVVLAESFARIFFRNSINLA--LPLMVCPGISK 112
Query: 192 ECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLG-PVIDAGGI 234
+ S GD++ + + E ++N T + + + I + +++ GGI
Sbjct: 113 KVSNGDILEVNLREGIVLNKTKREIIQGQKISEHAMNILENGGI 156
>gi|373468210|ref|ZP_09559469.1| 3-isopropylmalate dehydratase, small subunit [Lachnospiraceae
bacterium oral taxon 082 str. F0431]
gi|371766554|gb|EHO54805.1| 3-isopropylmalate dehydratase, small subunit [Lachnospiraceae
bacterium oral taxon 082 str. F0431]
Length = 163
Score = 99.8 bits (247), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 59/167 (35%), Positives = 92/167 (55%), Gaps = 15/167 (8%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + G+N+DTD IIPA YL N E+L + + + + + K
Sbjct: 5 GHVFKYGENVDTDVIIPARYL-----NATTGEELAKHCMEDIDKDFVNKV-------HKG 52
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
II+A NFGCGSSREHAP+A+ ++G S V+A+++ARIF+RN++ G P+
Sbjct: 53 DIIVARKNFGCGSSREHAPLAIKSSGVSVVIADTFARIFYRNAINIG--LPIIESPEAAA 110
Query: 192 ECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAY 237
E + GD V ++ + + TTGK YK + + + +I+AGG+ Y
Sbjct: 111 EINEGDDVKVDFDTGIITDITTGKTYKGQAFPEFMQNIINAGGLINY 157
>gi|46581386|ref|YP_012194.1| 3-isopropylmalate dehydratase small subunit [Desulfovibrio vulgaris
str. Hildenborough]
gi|120601439|ref|YP_965839.1| 3-isopropylmalate dehydratase small subunit [Desulfovibrio vulgaris
DP4]
gi|387154599|ref|YP_005703535.1| 3-isopropylmalate dehydratase small subunit [Desulfovibrio vulgaris
RCH1]
gi|81566205|sp|Q726X3.1|LEUD_DESVH RecName: Full=3-isopropylmalate dehydratase small subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|171769276|sp|A1VAE6.1|LEUD_DESVV RecName: Full=3-isopropylmalate dehydratase small subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|46450808|gb|AAS97454.1| 3-isopropylmalate dehydratase, small subunit [Desulfovibrio
vulgaris str. Hildenborough]
gi|120561668|gb|ABM27412.1| 3-isopropylmalate dehydratase, small subunit [Desulfovibrio
vulgaris DP4]
gi|311235043|gb|ADP87897.1| 3-isopropylmalate dehydratase, small subunit [Desulfovibrio
vulgaris RCH1]
Length = 167
Score = 99.8 bits (247), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 88/171 (51%), Gaps = 15/171 (8%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
+ G + VGD+IDTD IIPA +L + +KLG + GL + R
Sbjct: 3 YAGTAHKVGDHIDTDAIIPARFLVTT-----DAQKLGENCMEGLEHGWVARV-------K 50
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
I++ G NFGCGSSREHAP+A+ AG VVA S+ARIF+RN G + L
Sbjct: 51 SGDIMVGGRNFGCGSSREHAPIAILGAGMPVVVAHSFARIFYRNGFNMGLL--LLEVGDD 108
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPI-GDLGPVIDAGGIFAYAR 239
++ + GD + ++ A + N TTG P+ + ++D GG+ Y R
Sbjct: 109 VDKIADGDDIEVDAASGVITNRTTGATITCAPVPQSMRELLDTGGLVPYVR 159
>gi|336426728|ref|ZP_08606737.1| 3-isopropylmalate dehydratase small subunit [Lachnospiraceae
bacterium 3_1_57FAA_CT1]
gi|336010744|gb|EGN40726.1| 3-isopropylmalate dehydratase small subunit [Lachnospiraceae
bacterium 3_1_57FAA_CT1]
Length = 163
Score = 99.8 bits (247), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 91/169 (53%), Gaps = 19/169 (11%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT-- 129
G + GDN+DTD IIPA YL S+P E AT+ ID++ KT
Sbjct: 6 GTVFKYGDNVDTDVIIPARYLN--SSDPAEL------------ATHCMEDIDKDFIKTVK 51
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
K II+A NFGCGSSREHAP+A+ AAG S V+AE++ARIF+RN++ G P+
Sbjct: 52 KGDIIVAEKNFGCGSSREHAPIAIKAAGVSCVIAETFARIFYRNAINIG--LPIIECPEA 109
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAY 237
GD V ++ + + T G +K + + + +IDA G+ Y
Sbjct: 110 SRAIEAGDEVEVDFDSGIITDITKGTSFKGQAFPEFMQKIIDAEGLVNY 158
>gi|225018027|ref|ZP_03707219.1| hypothetical protein CLOSTMETH_01963 [Clostridium methylpentosum
DSM 5476]
gi|224949233|gb|EEG30442.1| hypothetical protein CLOSTMETH_01963 [Clostridium methylpentosum
DSM 5476]
Length = 161
Score = 99.8 bits (247), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 91/166 (54%), Gaps = 15/166 (9%)
Query: 71 HGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTK 130
HG+ + GDN+DTD IIPA YL ++ + ++L S+ + + + +
Sbjct: 4 HGIVHKYGDNVDTDVIIPARYLNIL-----DRKELASHCMEDIDKDFI-------QNVKP 51
Query: 131 YKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLC 190
+++A NFGCGSSREHAP+ + +G S V+A ++ARIF+RN++ G P+
Sbjct: 52 GDVMVARSNFGCGSSREHAPLVIKESGISVVIAATFARIFYRNAINIG--LPILECPEAS 109
Query: 191 EECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIF 235
E+ GD V ++ + NHT + Y+ +P + + +I AGG+
Sbjct: 110 EKIEAGDDVEVDFDTGVITNHTKNETYQAQPFPNFIKEIITAGGLL 155
>gi|435853034|ref|YP_007314353.1| 3-isopropylmalate dehydratase, small subunit [Halobacteroides
halobius DSM 5150]
gi|433669445|gb|AGB40260.1| 3-isopropylmalate dehydratase, small subunit [Halobacteroides
halobius DSM 5150]
Length = 164
Score = 99.8 bits (247), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 61/172 (35%), Positives = 94/172 (54%), Gaps = 15/172 (8%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
G + GD+IDTD IIPA YL N + E+L + L L F+D+ E
Sbjct: 3 IQGKAWKYGDDIDTDVIIPARYL-----NTSQPEELAKHCLEDL----DEDFVDKME--- 50
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
+ +I+A NFGCGSSREHAP+A+ AAG S V+A S+ARIF+RNS+ G P+
Sbjct: 51 QGDLIVAQDNFGCGSSREHAPLAIKAAGVSCVIANSFARIFYRNSINIG--LPILECPTA 108
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
E + GD + +++ + N T +EY+ + + + ++ G+ Y ++
Sbjct: 109 VEAIAEGDQIEVDVESGTIKNLTKAEEYQAEAFPEFMQEIMAKDGLVNYVKE 160
>gi|436841920|ref|YP_007326298.1| 3-isopropylmalate dehydratase small subunit [Desulfovibrio
hydrothermalis AM13 = DSM 14728]
gi|432170826|emb|CCO24197.1| 3-isopropylmalate dehydratase small subunit [Desulfovibrio
hydrothermalis AM13 = DSM 14728]
Length = 164
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/172 (37%), Positives = 97/172 (56%), Gaps = 15/172 (8%)
Query: 69 TFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETK 128
T G + VG +IDTD IIPA +L V ++PDE LG+ + GL A + R + +N+
Sbjct: 2 TIKGTAHRVGAHIDTDAIIPARFL--VTTDPDE---LGANCMEGLEAGWIKR-VKQND-- 53
Query: 129 TKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEAR 188
I++A NFGCGSSREHAP++L AG VVA+S+ARIF+RN G + L
Sbjct: 54 ----IMVADENFGCGSSREHAPISLLGAGIPVVVAKSFARIFYRNGFNMGLV--LLEVGD 107
Query: 189 LCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYAR 239
++ GD + ++ + + N TTG+ P+ + ++D GG+ Y +
Sbjct: 108 DFKKLGDGDQLEVDADKGEIKNLTTGETITCAPVPPFMKSILDCGGLVEYVK 159
>gi|302671013|ref|YP_003830973.1| 3-isopropylmalate dehydratase small subunit [Butyrivibrio
proteoclasticus B316]
gi|302395486|gb|ADL34391.1| 3-isopropylmalate dehydratase small subunit LeuD [Butyrivibrio
proteoclasticus B316]
Length = 163
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 90/169 (53%), Gaps = 19/169 (11%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + GDN+DTD IIPA YL N + +L ++ + + + +
Sbjct: 6 GTVFRYGDNVDTDVIIPARYL-----NSTDAGELAAHCMEDIDKDFAKKV-------KAG 53
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
II+A NFGCGSSREHAP+A+ A+G S V+A S+ARIF+RNS+ G P+ +
Sbjct: 54 DIIVADKNFGCGSSREHAPIAIKASGVSCVIARSFARIFYRNSINIG--LPIIECEEAAD 111
Query: 192 ECSTGDVVTIEIAESRLINHTTGKEYK---LKPIGDLGPVIDAGGIFAY 237
GDVV+I+ + + TTGK ++ P + +ID+ G+ Y
Sbjct: 112 AIKAGDVVSIDFDSGIITDETTGKSFQGQAFPPF--MQKIIDSEGLINY 158
>gi|330507360|ref|YP_004383788.1| 3-isopropylmalate dehydratase small subunit 2 [Methanosaeta
concilii GP6]
gi|328928168|gb|AEB67970.1| 3-isopropylmalate dehydratase small subunit 2 [Methanosaeta
concilii GP6]
Length = 164
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 94/173 (54%), Gaps = 22/173 (12%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + D+IDTD IIP YL + ++P E L + G+ + ++ Y
Sbjct: 3 GRAWKFMDDIDTDAIIPGRYLVM--NDPRE---LAVHLFEGVRPKMASEV-----KESDY 52
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLC- 190
++AG NFGCGSSREHAP+AL AG SAVVA+S+ARIFFRN++ G PL +C
Sbjct: 53 --VVAGENFGCGSSREHAPLALKGAGISAVVAKSFARIFFRNAINIG--LPL----FICP 104
Query: 191 --EECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
+ GD + I++ + N T + Y P+ D L ++D GG+ Y R+
Sbjct: 105 DVDRIEDGDQIEIDMKGGVIKNITRKESYNTTPLPDFLREIVDVGGLVEYTRR 157
>gi|429124131|ref|ZP_19184663.1| 3-isopropylmalate dehydratase small subunit [Brachyspira hampsonii
30446]
gi|426279861|gb|EKV56880.1| 3-isopropylmalate dehydratase small subunit [Brachyspira hampsonii
30446]
Length = 162
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 95/176 (53%), Gaps = 23/176 (13%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + GDN+DTD IIPA YL N +++L ++ + + + ++ K
Sbjct: 5 GFVHKYGDNVDTDVIIPARYL-----NTANHKELAAHCMEDIDKDFVSKV-------KKG 52
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
I++ G NFGCGSSREHAP+A+ +G S V+A S+ARIF+RNS+ G + L+ CE
Sbjct: 53 DIMVGGENFGCGSSREHAPIAIKESGISCVIASSFARIFYRNSINIG-LAILE-----CE 106
Query: 192 ECS----TGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARKTG 242
E S GD V ++ + N T + YK +P + + +I++ G+ + G
Sbjct: 107 EASQKIDNGDEVEVDFDSGVITNITKNESYKAEPFPEFIKNIINSNGLLNSIKNKG 162
>gi|433653759|ref|YP_007297467.1| 3-isopropylmalate dehydratase, small subunit [Thermoanaerobacterium
thermosaccharolyticum M0795]
gi|433291948|gb|AGB17770.1| 3-isopropylmalate dehydratase, small subunit [Thermoanaerobacterium
thermosaccharolyticum M0795]
Length = 161
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/167 (37%), Positives = 96/167 (57%), Gaps = 21/167 (12%)
Query: 78 GDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYK---II 134
GDN+DTD IIPA +L S+P E A++ ID++ K K K I+
Sbjct: 9 GDNVDTDVIIPARFLNT--SDPKEL------------ASHCMEDIDKD-FKNKVKPGDIM 53
Query: 135 IAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEECS 194
IAG NFGCGSSREHAP+A+ +G S V+A+S+ARIF+RN++ G P+
Sbjct: 54 IAGYNFGCGSSREHAPIAIKESGISCVIAKSFARIFYRNAINIG--LPILECPDAASAIE 111
Query: 195 TGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
GD+V++++ + + T G E+K +P + + +I+ GG+ Y ++
Sbjct: 112 DGDMVSVDLETGIIKDITKGIEFKSQPFPEFIKKIIECGGLINYVKE 158
>gi|315924776|ref|ZP_07920993.1| 3-isopropylmalate dehydratase small subunit [Pseudoramibacter
alactolyticus ATCC 23263]
gi|315621675|gb|EFV01639.1| 3-isopropylmalate dehydratase small subunit [Pseudoramibacter
alactolyticus ATCC 23263]
Length = 163
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 90/169 (53%), Gaps = 19/169 (11%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + GDN+DTD IIPA YL S+P E A + ID++ +
Sbjct: 5 GKVFRYGDNVDTDVIIPARYLNT--SDPLEL------------AEHCMEDIDKDFVNNVH 50
Query: 132 K--IIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
K II+A NFGCGSSREHAP+A+ A+G S V+A S+ARIF+RN++ G P+
Sbjct: 51 KGDIIVADDNFGCGSSREHAPIAIKASGVSCVIANSFARIFYRNAINIG--LPILESPEA 108
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAY 237
GD V ++ ++ + T GK ++ +P + +I AGG+ Y
Sbjct: 109 VAAIEAGDTVEVDFDSGKITDVTKGKSFQGQPFPPFMQELIAAGGLVNY 157
>gi|317486012|ref|ZP_07944867.1| 3-isopropylmalate dehydratase [Bilophila wadsworthia 3_1_6]
gi|345887731|ref|ZP_08838894.1| 3-isopropylmalate dehydratase small subunit [Bilophila sp. 4_1_30]
gi|316922785|gb|EFV44016.1| 3-isopropylmalate dehydratase [Bilophila wadsworthia 3_1_6]
gi|345041496|gb|EGW45644.1| 3-isopropylmalate dehydratase small subunit [Bilophila sp. 4_1_30]
Length = 167
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/174 (37%), Positives = 95/174 (54%), Gaps = 19/174 (10%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
F G+ + VG++IDTD IIPA +L V ++P +KLG + GL + R
Sbjct: 3 FTGVSHKVGEHIDTDAIIPARFL--VTTDP---KKLGENCMEGLEHGWVKRV-------Q 50
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
I++A NFGCGSSREHAP+A+ AG AV+A S+ARIF+RN+ G + L
Sbjct: 51 VGDILVAERNFGCGSSREHAPIAILGAGMKAVIAHSFARIFYRNAFNMGLL--LLEIGDD 108
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYK---LKPIGDLGPVIDAGGIFAYARK 240
+ GD + + E + N TTG+ K L P+ + +ID GG+ Y R+
Sbjct: 109 VNKIKDGDKLEVSPEEGVIKNLTTGETIKVPALSPV--MQNLIDKGGLVNYVRE 160
>gi|376295512|ref|YP_005166742.1| 3-isopropylmalate dehydratase small subunit [Desulfovibrio
desulfuricans ND132]
gi|323458073|gb|EGB13938.1| 3-isopropylmalate dehydratase, small subunit [Desulfovibrio
desulfuricans ND132]
Length = 163
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 96/170 (56%), Gaps = 15/170 (8%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + VGD+IDTD IIPA +L + ++LG+ + GL A + R + EN+
Sbjct: 5 GTAHKVGDHIDTDAIIPARFLVTT-----DAKELGANCMEGLEAGWVKR-VKEND----- 53
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
+++ G NFGCGSSREHAP+++ AG V+A S+ARIF+RN G + L +
Sbjct: 54 -VMVGGVNFGCGSSREHAPISILGAGIPVVLAHSFARIFYRNGFNMGLV--LLEIGDDID 110
Query: 192 ECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
+ S D + ++ A + N TTG + P+ + +++AGG+ YA+K
Sbjct: 111 KFSDTDQIEVDTASGVIRNLTTGATVQAAPVPPFMQEILNAGGLVEYAKK 160
>gi|225390172|ref|ZP_03759896.1| hypothetical protein CLOSTASPAR_03922 [Clostridium asparagiforme
DSM 15981]
gi|225043766|gb|EEG54012.1| hypothetical protein CLOSTASPAR_03922 [Clostridium asparagiforme
DSM 15981]
Length = 161
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/169 (36%), Positives = 87/169 (51%), Gaps = 19/169 (11%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + GDN+DTD IIPA YL N + E+L + + + + + K
Sbjct: 5 GHVFKYGDNVDTDVIIPARYL-----NATKGEELAVHCMEDIDKDFVNKV-------QKG 52
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
II+A NFGCGSSREHAP+A+ AG S V+AE++ARIF+RNS+ G P+
Sbjct: 53 DIIVANKNFGCGSSREHAPLAIKCAGVSCVIAETFARIFYRNSINIG--LPIIECVEAAR 110
Query: 192 ECSTGDVVTIEIAESRLINHTTGKEYK---LKPIGDLGPVIDAGGIFAY 237
GD V ++ + N T G+ Y+ P + +I AGG+ Y
Sbjct: 111 SIEAGDEVEVDFDSGLITNKTKGERYQGQSFPPF--MQKIISAGGLVNY 157
>gi|336436524|ref|ZP_08616236.1| 3-isopropylmalate dehydratase small subunit [Lachnospiraceae
bacterium 1_4_56FAA]
gi|336007389|gb|EGN37414.1| 3-isopropylmalate dehydratase small subunit [Lachnospiraceae
bacterium 1_4_56FAA]
Length = 163
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/169 (36%), Positives = 94/169 (55%), Gaps = 17/169 (10%)
Query: 71 HGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTK 130
G + GDN+DTD IIPA YL N + ++L S+A++ + + N+ K
Sbjct: 4 QGRVFKYGDNVDTDVIIPARYL-----NSFDAQELASHAMVDIDPEFV------NKVKPG 52
Query: 131 YKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG-EIYPLDSEARL 189
+I+A NFGCGSSREHAP+ L G S ++AE++ARIF+RN++ G I AR
Sbjct: 53 -DLIVANKNFGCGSSREHAPLCLKTVGVSCIIAETFARIFYRNAINIGLPIIECPEAARG 111
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAY 237
E+ GD V ++ ++ N T G E++ + + + +I AGG+ Y
Sbjct: 112 IED---GDEVEVDFDSGKIYNRTKGTEFQGQSFPEFMQKLIAAGGLVNY 157
>gi|301059862|ref|ZP_07200753.1| 3-isopropylmalate dehydratase small subunit [delta proteobacterium
NaphS2]
gi|300446012|gb|EFK09886.1| 3-isopropylmalate dehydratase small subunit [delta proteobacterium
NaphS2]
Length = 172
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/178 (35%), Positives = 95/178 (53%), Gaps = 15/178 (8%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + GD+IDTD IIPA +L + S+ DE K A F D+ ++
Sbjct: 5 GSAFKFGDHIDTDLIIPARFLNV--SDKDELAK-------NCFADLRPEFADKAKSGG-- 53
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
+I+AG NFGCGSSREHAP+A+ AAG VVA S+ARIF+RN+ G P+ +
Sbjct: 54 -VIVAGENFGCGSSREHAPIAIKAAGIGCVVARSFARIFYRNAFNIG--LPILEATMEQD 110
Query: 192 ECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARKTGMIASRN 248
+ GD V++++ + N GK + P+ + +++ GG+ Y +K M + N
Sbjct: 111 FIAEGDPVSVDLTSGEVRNEANGKTVQAMPLPPFMREMVECGGLVPYIKKQKMKSEVN 168
>gi|342213723|ref|ZP_08706442.1| 3-isopropylmalate dehydratase small subunit [Veillonella sp. oral
taxon 780 str. F0422]
gi|341597311|gb|EGS39870.1| 3-isopropylmalate dehydratase small subunit [Veillonella sp. oral
taxon 780 str. F0422]
Length = 164
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 91/173 (52%), Gaps = 15/173 (8%)
Query: 68 ATFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENET 127
A F G + GDN+DTD IIPA YL + + +L +A+ + T+
Sbjct: 2 ADFQGTIWRYGDNVDTDVIIPARYLAIA-----DMAELAEHAMEDIDTTFAPNV------ 50
Query: 128 KTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEA 187
+I++AG NFGCGSSREHAP + G S +VA+S+ARIFFRN++ G P+
Sbjct: 51 -KAGEIMVAGKNFGCGSSREHAPAVIKEKGISCIVADSFARIFFRNAINIG--LPVIEIG 107
Query: 188 RLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYAR 239
+ G + +E+A + N TTG+ Y+ + + + AGG+ +A+
Sbjct: 108 DAVDRIQEGHEIAVEMATGVVHNVTTGESYQGTALPQFVQNIAKAGGLVNFAK 160
>gi|332295927|ref|YP_004437850.1| 3-isopropylmalate dehydratase small subunit [Thermodesulfobium
narugense DSM 14796]
gi|332179030|gb|AEE14719.1| 3-isopropylmalate dehydratase small subunit [Thermodesulfobium
narugense DSM 14796]
Length = 167
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/179 (36%), Positives = 91/179 (50%), Gaps = 18/179 (10%)
Query: 69 TFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETK 128
T G V DNI TD IIP Y L + EKL +AL + + K
Sbjct: 2 TISGRVIKVSDNISTDHIIPGRYFHL----RSDLEKLSEHALEDVVENF--------HEK 49
Query: 129 TKYKIIIAGG-NFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEA 187
K +I+ GG NFG GSSREHAP+ L +G AVVA+S+ARIFFRN++ G + +
Sbjct: 50 AKGGVILVGGSNFGIGSSREHAPIVLKMSGVKAVVAKSFARIFFRNAINIGLPVIMVDTS 109
Query: 188 RLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIG-DLGPVIDAGGIFAYARKTGMIA 245
++ E GD +TI++ + L + P+ + +ID GGI Y +K G I+
Sbjct: 110 KILE----GDEITIDLEKGVLREKRNSYKLNFPPLDIRIQSIIDEGGIVNYIKKHGDIS 164
>gi|452850821|ref|YP_007492505.1| 3-isopropylmalate dehydratase small subunit [Desulfovibrio
piezophilus]
gi|451894475|emb|CCH47354.1| 3-isopropylmalate dehydratase small subunit [Desulfovibrio
piezophilus]
Length = 163
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 94/170 (55%), Gaps = 15/170 (8%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + VGD+IDTD IIPA +L + ++LG+ + GL A + R D +
Sbjct: 5 GTAHKVGDHIDTDAIIPARFLVTTDA-----KELGANCMEGLEAGWVKRVKDND------ 53
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
+++ G NFGCGSSREHAP+++ AG V+A+S+ARIF+RN G + L +
Sbjct: 54 -VMVGGENFGCGSSREHAPISILGAGIPVVIAQSFARIFYRNGFNMGLV--LLEIGDDIK 110
Query: 192 ECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
+ D + ++ A + N TTG+ + + + ++DAGG+ YA+K
Sbjct: 111 KIGDTDQIEVDTATGSIKNLTTGETIQAAAVPPFMQEILDAGGLVEYAKK 160
>gi|188590474|ref|YP_001919739.1| 3-isopropylmalate dehydratase small subunit [Clostridium botulinum
E3 str. Alaska E43]
gi|226736042|sp|B2UYT4.1|LEUD_CLOBA RecName: Full=3-isopropylmalate dehydratase small subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|188500755|gb|ACD53891.1| 3-isopropylmalate dehydratase, small subunit [Clostridium botulinum
E3 str. Alaska E43]
Length = 161
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 93/172 (54%), Gaps = 15/172 (8%)
Query: 69 TFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETK 128
+ G + GDN+DTD IIPA YL N +++L S+ + + + D +
Sbjct: 2 SIKGRVFKYGDNVDTDVIIPARYL-----NTSNHKELASHCMEDIDKDFVNNVKDGD--- 53
Query: 129 TKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEAR 188
II+A NFGCGSSREHAP+A+ A+G S V+A ++ARIF+RNS+ G P+
Sbjct: 54 ----IIVANKNFGCGSSREHAPIAIKASGISCVIASTFARIFYRNSINIG--LPILECDE 107
Query: 189 LCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYAR 239
+ + GD + ++ + + N + ++YK + + + +ID G+ Y R
Sbjct: 108 AVKNINDGDELEVDFSTGIIKNLSKNEKYKGEAFPEFMQKIIDNDGLIGYIR 159
>gi|448572665|ref|ZP_21640503.1| 3-isopropylmalate dehydratase small subunit [Haloferax lucentense
DSM 14919]
gi|445720272|gb|ELZ71948.1| 3-isopropylmalate dehydratase small subunit [Haloferax lucentense
DSM 14919]
Length = 177
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/169 (37%), Positives = 98/169 (57%), Gaps = 16/169 (9%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G +V GDNIDTDQI P+ ++ V S+PDE L S+A L ++ ET
Sbjct: 19 GRAWVFGDNIDTDQITPSRFI--VSSDPDE---LASHAFEDLRPEFSGSV----ETG--- 66
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
++AG NFG GSSREH+P++L AG SAVVA+S+ARIFFRN++ G + A E
Sbjct: 67 DFVVAGENFGSGSSREHSPLSLVGAGVSAVVAQSFARIFFRNAINLGLPVLICPGADAIE 126
Query: 192 ECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYAR 239
+ GD + +++ + NHT + Y+ + + + L +++ GG+ Y +
Sbjct: 127 D---GDEIHVDLDAGVVTNHTRDETYEAEALPEFLQSLVEQGGLKPYTK 172
>gi|330836296|ref|YP_004410937.1| 3-isopropylmalate dehydratase small subunit [Sphaerochaeta
coccoides DSM 17374]
gi|329748199|gb|AEC01555.1| 3-isopropylmalate dehydratase small subunit [Sphaerochaeta
coccoides DSM 17374]
Length = 174
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 96/171 (56%), Gaps = 15/171 (8%)
Query: 71 HGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTK 130
+G + GD+IDTD IIPA YLT ++P E L S+ + + + + K
Sbjct: 5 YGKVFRYGDDIDTDVIIPARYLTT--TDPVE---LASHCMEDIDKGFVA-------SVKK 52
Query: 131 YKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLC 190
I++A NFGCGSSREHAP+A+ A+G S V+A ++ARIF+RN++ G P+ C
Sbjct: 53 GDIMVADKNFGCGSSREHAPIAIKASGISCVIARTFARIFYRNALNIG--LPILECPDAC 110
Query: 191 EECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
+ GD V ++ + + N TTG + +P + +I AGG+ AY ++
Sbjct: 111 AGITAGDDVEVDFDKGTITNLTTGASWNAEPFPPFMQNLIAAGGLAAYMKE 161
>gi|410995976|gb|AFV97441.1| 3-isopropylmalate dehydratase small subunit [uncultured
Sulfuricurvum sp. RIFRC-1]
Length = 167
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/171 (38%), Positives = 93/171 (54%), Gaps = 18/171 (10%)
Query: 71 HGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTK 130
G + G +IDTD II A YL S+P E L + + T+ ++ I +
Sbjct: 5 EGKVWNFGKDIDTDLIIAARYLNT--SDPKE---LAKHVMEDADPTFVSKMIPGD----- 54
Query: 131 YKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG-EIYPLDSEARL 189
II+A NFGCGSSREHAP+AL AAG +AV+A ++ARIF+RN+ G I+ L +
Sbjct: 55 --IIVADENFGCGSSREHAPIALKAAGVAAVIAPTFARIFYRNAFNMGLPIFELTESLEI 112
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYAR 239
E G+ V+I++ + N T GK Y PI + ++ AGG+ YA
Sbjct: 113 KE----GESVSIDMDAGTITNTTNGKVYNFIPIPPFMQELLSAGGLMNYAN 159
>gi|187935137|ref|YP_001884558.1| 3-isopropylmalate dehydratase small subunit [Clostridium botulinum
B str. Eklund 17B]
gi|226736043|sp|B2TIR0.1|LEUD_CLOBB RecName: Full=3-isopropylmalate dehydratase small subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|187723290|gb|ACD24511.1| 3-isopropylmalate dehydratase, small subunit [Clostridium botulinum
B str. Eklund 17B]
Length = 161
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 92/169 (54%), Gaps = 15/169 (8%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + GDN+DTD IIPA YL N +++L S+ + + + D +
Sbjct: 5 GRVFKYGDNVDTDVIIPARYL-----NTSNHKELASHCMEDIDKEFVNNVKDGD------ 53
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
II+A NFGCGSSREHAP+A+ AAG S V+A ++ARIF+RNS+ G P+ +
Sbjct: 54 -IIVANKNFGCGSSREHAPIAIKAAGISCVIASTFARIFYRNSINIG--LPILECDEAVK 110
Query: 192 ECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYAR 239
+ GD + ++ + + N + ++Y+ + + + +ID G+ Y R
Sbjct: 111 NINHGDELEVDFSTGIIKNLSKNEQYQGEAFPEFMQKIIDNDGLIGYIR 159
>gi|147676868|ref|YP_001211083.1| 3-isopropylmalate dehydratase small subunit [Pelotomaculum
thermopropionicum SI]
gi|146272965|dbj|BAF58714.1| 3-isopropylmalate dehydratase small subunit [Pelotomaculum
thermopropionicum SI]
Length = 166
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/167 (37%), Positives = 88/167 (52%), Gaps = 15/167 (8%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + G +IDTD IIPA YL N + E+L + + ++ R
Sbjct: 5 GKVWKFGPDIDTDAIIPARYL-----NTSDPEELARHCMEDADPSFPARV-------RPG 52
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
+I+AG NFGCGSSREHAP+A+ AAG S V+A S+ARIF+RN+ G P+
Sbjct: 53 DVIVAGKNFGCGSSREHAPIAIKAAGVSCVIAASFARIFYRNAFNIG--LPIFESPEAAG 110
Query: 192 ECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAY 237
GD V ++ A + + TTGK Y+ P+ + +I AGG+ Y
Sbjct: 111 GIGQGDEVAVDAAAGIITDLTTGKTYRAAPVPPFMRQIIAAGGLINY 157
>gi|297618305|ref|YP_003703464.1| 3-isopropylmalate dehydratase, small subunit [Syntrophothermus
lipocalidus DSM 12680]
gi|297146142|gb|ADI02899.1| 3-isopropylmalate dehydratase, small subunit [Syntrophothermus
lipocalidus DSM 12680]
Length = 166
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 95/172 (55%), Gaps = 15/172 (8%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
G + G ++DTD IIPA YL N + + L + + + + KT
Sbjct: 3 LRGEVHKFGADVDTDAIIPARYL-----NTSDPKHLALHCMEDADPDFPKK------VKT 51
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
+I+A NFGCGSSREHAP+A+ AAG S V+A+S+ARIF+RN++ G P+ +
Sbjct: 52 G-DVIVADKNFGCGSSREHAPLAIQAAGVSCVIAKSFARIFYRNAINIG--LPILECPEV 108
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
+E GD + +++ + N T+GKEY+ P + + ++ +GG+ Y R+
Sbjct: 109 VDEVRPGDELEVDLDRGVITNLTSGKEYQATPFPEFMQRIMASGGLINYVRE 160
>gi|313898882|ref|ZP_07832413.1| 3-isopropylmalate dehydratase, small subunit [Clostridium sp. HGF2]
gi|373125421|ref|ZP_09539255.1| 3-isopropylmalate dehydratase small subunit [Erysipelotrichaceae
bacterium 21_3]
gi|422327736|ref|ZP_16408763.1| 3-isopropylmalate dehydratase small subunit [Erysipelotrichaceae
bacterium 6_1_45]
gi|312956314|gb|EFR37951.1| 3-isopropylmalate dehydratase, small subunit [Clostridium sp. HGF2]
gi|371657622|gb|EHO22920.1| 3-isopropylmalate dehydratase small subunit [Erysipelotrichaceae
bacterium 21_3]
gi|371662284|gb|EHO27490.1| 3-isopropylmalate dehydratase small subunit [Erysipelotrichaceae
bacterium 6_1_45]
Length = 164
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 84/151 (55%), Gaps = 14/151 (9%)
Query: 71 HGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTK 130
+G + GDN+DTD IIPA YL S+P E L + + A + + I N+
Sbjct: 4 NGTAHKYGDNVDTDVIIPARYLN--TSDPKE---LAEKCMCDIDADFVKK-IKVND---- 53
Query: 131 YKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLC 190
I++AG NFGCGSSREHAP+A+ A+G S V+A+S+ARIF+RN++ G P+
Sbjct: 54 --IMVAGFNFGCGSSREHAPIAIKASGISCVIAKSFARIFYRNAINIG--LPILECVEAS 109
Query: 191 EECSTGDVVTIEIAESRLINHTTGKEYKLKP 221
E D V I +IN T + Y+ +P
Sbjct: 110 ERIDDKDEVEINFDTGEIINKTKNETYQAQP 140
>gi|346316986|ref|ZP_08858483.1| 3-isopropylmalate dehydratase small subunit [Erysipelotrichaceae
bacterium 2_2_44A]
gi|345902023|gb|EGX71815.1| 3-isopropylmalate dehydratase small subunit [Erysipelotrichaceae
bacterium 2_2_44A]
Length = 164
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 84/151 (55%), Gaps = 14/151 (9%)
Query: 71 HGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTK 130
+G + GDN+DTD IIPA YL S+P E L + + A + + I N+
Sbjct: 4 NGTAHKYGDNVDTDVIIPARYLN--TSDPKE---LAEKCMCDIDADFVKK-IKVND---- 53
Query: 131 YKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLC 190
I++AG NFGCGSSREHAP+A+ A+G S V+A+S+ARIF+RN++ G P+
Sbjct: 54 --IMVAGFNFGCGSSREHAPIAIKASGISCVIAKSFARIFYRNAINIG--LPILECVEAS 109
Query: 191 EECSTGDVVTIEIAESRLINHTTGKEYKLKP 221
E D V I +IN T + Y+ +P
Sbjct: 110 ERIDDKDEVEINFNTGEIINKTKNETYQAQP 140
>gi|309777582|ref|ZP_07672534.1| 3-isopropylmalate dehydratase, small subunit [Erysipelotrichaceae
bacterium 3_1_53]
gi|308914671|gb|EFP60459.1| 3-isopropylmalate dehydratase, small subunit [Erysipelotrichaceae
bacterium 3_1_53]
Length = 163
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 83/151 (54%), Gaps = 14/151 (9%)
Query: 71 HGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTK 130
+G + GDN+DTD IIPA YL S+P E L + + A + + ++
Sbjct: 4 NGTAHKYGDNVDTDVIIPARYLNT--SDPKE---LAEKCMCDIDADFVKKIKPDD----- 53
Query: 131 YKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLC 190
I++AG NFGCGSSREHAP+A+ A+G S V+A+S+ARIF+RN++ G P+
Sbjct: 54 --IMVAGFNFGCGSSREHAPIAIKASGISCVIAKSFARIFYRNAINIG--LPILECVEAS 109
Query: 191 EECSTGDVVTIEIAESRLINHTTGKEYKLKP 221
E D V I +IN T + Y+ +P
Sbjct: 110 ERIDDKDEVEINFDTGEIINKTKNETYQAQP 140
>gi|288931859|ref|YP_003435919.1| 3-isopropylmalate dehydratase, small subunit [Ferroglobus placidus
DSM 10642]
gi|288894107|gb|ADC65644.1| 3-isopropylmalate dehydratase, small subunit [Ferroglobus placidus
DSM 10642]
Length = 167
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 93/177 (52%), Gaps = 18/177 (10%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
G + GDNI TD I P Y L + E+L + + + +F
Sbjct: 3 LKGKAWKFGDNITTDHITPGRYYHL----RSKIEELAKHVMEDADPDFMKKF-------R 51
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG-EIYPLDSEAR 188
K ++AG NFG GSSREHAP+AL AG SAV+A+S+ARIF+RN++ G + D++A
Sbjct: 52 KGDFVVAGKNFGMGSSREHAPLALKVAGVSAVIAKSFARIFYRNAINVGLPVLIADTDA- 110
Query: 189 LCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARKTGMI 244
+GD + +++ + N + G E K KP+ D + ++ GG+ + +K G I
Sbjct: 111 ----IDSGDELEVDLERGVIKNLSKGVEIKAKPLPDFMLKILKEGGLVEFVKKYGDI 163
>gi|220931929|ref|YP_002508837.1| 3-isopropylmalate dehydratase small subunit [Halothermothrix orenii
H 168]
gi|259494364|sp|B8CX23.1|LEUD_HALOH RecName: Full=3-isopropylmalate dehydratase small subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|219993239|gb|ACL69842.1| 3-isopropylmalate dehydratase, small subunit [Halothermothrix
orenii H 168]
Length = 165
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/139 (39%), Positives = 81/139 (58%), Gaps = 14/139 (10%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
G GDN+DTD IIPA YL SNPDE L + + + + ++ D +
Sbjct: 3 LKGRVLKYGDNVDTDVIIPARYLNT--SNPDE---LARHCMEDIDPDFASKVKDGD---- 53
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
II+AG NFG GSSREHAP+A+ +AG S V+AES+ARIF+RN++ G P+ +
Sbjct: 54 ---IIVAGKNFGSGSSREHAPLAIKSAGVSCVIAESFARIFYRNAINIG--LPILECKDV 108
Query: 190 CEECSTGDVVTIEIAESRL 208
+ GD+V +++ E ++
Sbjct: 109 TDRIEEGDLVEVDLNEGKI 127
>gi|147919250|ref|YP_687014.1| 3-isopropylmalate dehydratase, small subunit [Methanocella
arvoryzae MRE50]
gi|110622410|emb|CAJ37688.1| 3-isopropylmalate dehydratase, small subunit [Methanocella
arvoryzae MRE50]
Length = 157
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 93/171 (54%), Gaps = 20/171 (11%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
F G + GDN+DTD IIP +YL ++ G +A+ G ID
Sbjct: 3 FKGNVWKYGDNVDTDVIIPGKYL-----RSTDFNVFGQHAMEG---------IDPAFRPN 48
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
K II+AG NFGCGSSRE AP+A+ AG V+A+S+ARIFFRN++ G P+ EA +
Sbjct: 49 KGDIIVAGENFGCGSSREQAPLAIKYAGIDCVIAKSFARIFFRNAINVG--LPI-VEADV 105
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYAR 239
+ + GD++ +++ + + G Y + D L ++ AGG+ AY R
Sbjct: 106 FDAVAKGDIIEVDLDQGYVT--ANGARYVSTRLPDFLQEILYAGGLVAYRR 154
>gi|374301571|ref|YP_005053210.1| 3-isopropylmalate dehydratase small subunit [Desulfovibrio
africanus str. Walvis Bay]
gi|332554507|gb|EGJ51551.1| 3-isopropylmalate dehydratase small subunit [Desulfovibrio
africanus str. Walvis Bay]
Length = 167
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/172 (37%), Positives = 91/172 (52%), Gaps = 15/172 (8%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
+ G + VG +IDTD IIPA++L + ++LG+ + GL + R
Sbjct: 3 YTGTAHKVGAHIDTDAIIPAKFLVTT-----DAQELGANCMEGLEPGWIKRV-------K 50
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
I++A NFGCGSSREHAP+AL AG VVA S+ARIF+RN+ G I L
Sbjct: 51 PGDIMVAEENFGCGSSREHAPIALKGAGIPVVVAHSFARIFYRNAFNMGLI--LMEIGDK 108
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPI-GDLGPVIDAGGIFAYARK 240
E GD + I+ + N TTG + KP+ + ++DAGG+ Y +K
Sbjct: 109 VSEIKDGDKLEIDPDSGTIRNVTTGAVIQGKPVPPSMQELLDAGGLVPYVKK 160
>gi|167761156|ref|ZP_02433283.1| hypothetical protein CLOSCI_03561 [Clostridium scindens ATCC 35704]
gi|336423147|ref|ZP_08603282.1| 3-isopropylmalate dehydratase small subunit [Lachnospiraceae
bacterium 5_1_57FAA]
gi|167660822|gb|EDS04952.1| putative 3-isopropylmalate dehydratase, small subunit [Clostridium
scindens ATCC 35704]
gi|336005318|gb|EGN35364.1| 3-isopropylmalate dehydratase small subunit [Lachnospiraceae
bacterium 5_1_57FAA]
Length = 164
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/174 (35%), Positives = 94/174 (54%), Gaps = 17/174 (9%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + GDN+DTD IIPA YL N + ++L ++A++ + + +
Sbjct: 5 GKVFKYGDNVDTDVIIPARYL-----NSFDGKELATHAMVDIDPEFAGKV-------QPG 52
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
+I+A NFGCGSSREHAP+ L AG S V+AE++ARIFFRN++ G P+ E
Sbjct: 53 DMIVARKNFGCGSSREHAPLCLREAGVSCVIAETFARIFFRNAINIG--LPIIECPEAAE 110
Query: 192 ECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAY--ARKTG 242
GD V ++ + N T +YK +P + + +I AGG+ Y ++K G
Sbjct: 111 GIEAGDEVEVDFDSGIIYNKTKDAQYKGQPFPEFMQNLIAAGGLVNYTNSKKKG 164
>gi|171185295|ref|YP_001794214.1| 3-isopropylmalate dehydratase small subunit [Pyrobaculum
neutrophilum V24Sta]
gi|226736085|sp|B1YDA5.1|LEUD_THENV RecName: Full=3-isopropylmalate dehydratase small subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|170934507|gb|ACB39768.1| 3-isopropylmalate dehydratase, small subunit [Pyrobaculum
neutrophilum V24Sta]
Length = 162
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/173 (38%), Positives = 94/173 (54%), Gaps = 16/173 (9%)
Query: 71 HGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTK 130
G V GD IDTD IIPA+YL V ++P LG +A+ L + K K
Sbjct: 4 RGKAIVYGDKIDTDVIIPAKYL--VYTDP---AVLGQHAMEPLDPEFPK--------KAK 50
Query: 131 YKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLC 190
+++AG FG GSSRE A +AL AG AVVAES+ARIFFRN++ G P+ +
Sbjct: 51 GAVLVAGRAFGMGSSREQAAIALKGAGVLAVVAESFARIFFRNAINVG--LPVLQVPDVT 108
Query: 191 EECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLG-PVIDAGGIFAYARKTG 242
+ GD + ++I L+N TTG+ + KP+ L ++ AGG+ + + G
Sbjct: 109 KRVREGDELEVDIEGGYLLNLTTGERLEGKPLRGLPLAILKAGGLVNFLKTAG 161
>gi|255658152|ref|ZP_05403561.1| 3-isopropylmalate dehydratase, small subunit [Mitsuokella multacida
DSM 20544]
gi|260849459|gb|EEX69466.1| 3-isopropylmalate dehydratase, small subunit [Mitsuokella multacida
DSM 20544]
Length = 179
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 93/179 (51%), Gaps = 18/179 (10%)
Query: 59 DSRATKEPTATFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIG--LPAT 116
++ K T HG +V GDN+DTDQI P++Y+ E E + YA+ G +P
Sbjct: 3 NAEEKKAMTQMVHGKAFVFGDNVDTDQIYPSKYVEYT-----EIEDIRKYAMSGSAMP-D 56
Query: 117 YTTRFIDENETKTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVA 176
RF + II+AG NFGCGSSREHA + L G A++AES+ RIFFRN++
Sbjct: 57 LVKRFHPGD-------IIVAGRNFGCGSSREHAVMTLKGIGVGAILAESFGRIFFRNAIN 109
Query: 177 TGEIYPLDSEARLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGI 234
G P+ + + GD +++ + N T G + +P+ D + ++ GGI
Sbjct: 110 LG--LPVITCKGIGTFFQNGDTADVDLITGTITNETAGTSVQAEPLSDYIMDILQHGGI 166
>gi|164687496|ref|ZP_02211524.1| hypothetical protein CLOBAR_01137 [Clostridium bartlettii DSM
16795]
gi|164603270|gb|EDQ96735.1| 3-isopropylmalate dehydratase, small subunit [Clostridium
bartlettii DSM 16795]
Length = 168
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/172 (36%), Positives = 94/172 (54%), Gaps = 17/172 (9%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + GDNIDTD IIPA YL N + ++L S+ + + + + ++E +
Sbjct: 11 GKVFKYGDNIDTDVIIPARYL-----NTPDMKELASHCMEDIDKEFAQK-VEEGD----- 59
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG-EIYPLDSEARLC 190
II+A NFGCGSSREHAP+A+ +G S V+A ++ARIF+RNS+ G I D A+
Sbjct: 60 -IIVANKNFGCGSSREHAPIAIKESGISCVIASTFARIFYRNSINIGLPILECDEAAKGI 118
Query: 191 EECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARKT 241
EE GD V I+ + N T + Y+ +P + + +I GG+ K
Sbjct: 119 EE---GDKVEIDFDTGVIKNITKNETYQAEPFPEFMQNIIQNGGLIKSIEKN 167
>gi|410657542|ref|YP_006909913.1| 3-isopropylmalate dehydratase small subunit [Dehalobacter sp. DCA]
gi|410660577|ref|YP_006912948.1| 3-isopropylmalate dehydratase small subunit [Dehalobacter sp. CF]
gi|409019897|gb|AFV01928.1| 3-isopropylmalate dehydratase small subunit [Dehalobacter sp. DCA]
gi|409022933|gb|AFV04963.1| 3-isopropylmalate dehydratase small subunit [Dehalobacter sp. CF]
Length = 162
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 92/170 (54%), Gaps = 15/170 (8%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + G++IDTD IIPA YL N E E L ++ + A++
Sbjct: 2 GKAWKFGNDIDTDVIIPARYL-----NRFEPEHLAAHCMEDADASFAANV-------KPG 49
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
I++ G NFGCGSSREHAP+A+ AAG A++AESYARIF+RN++ G P+ +
Sbjct: 50 DIMLGGKNFGCGSSREHAPLAIKAAGVKAIIAESYARIFYRNALNIG--MPILECPEAVK 107
Query: 192 ECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
+GD + +++ S + N + G ++ P + +I AGG+ Y ++
Sbjct: 108 GIESGDEIEVDLQNSTIRNVSKGTSFQATPFPPFMQELIKAGGLVPYVKE 157
>gi|237750930|ref|ZP_04581410.1| 3-isopropylmalate dehydratase small subunit [Helicobacter bilis
ATCC 43879]
gi|229373375|gb|EEO23766.1| 3-isopropylmalate dehydratase small subunit [Helicobacter bilis
ATCC 43879]
Length = 163
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 93/172 (54%), Gaps = 15/172 (8%)
Query: 71 HGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTK 130
G + GDN+DTD IIPA YL N ++ +L S+ + + + +
Sbjct: 4 QGFIHKYGDNVDTDVIIPARYL-----NTADHRELASHCMEDIDKDFVKKV-------RS 51
Query: 131 YKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLC 190
I++ G NFGCGSSREHAP+A+ A+G S ++A+S+ARIF+RN++ G + ++SE +
Sbjct: 52 GDIMVGGWNFGCGSSREHAPIAIKASGISCIIAKSFARIFYRNAINIG-LAIIESE-EIA 109
Query: 191 EECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARKT 241
+ GD V+I+ + +I + K + P + +I+A G + K
Sbjct: 110 DFLQDGDEVSIDFDKGEIIESKSAKSFSTTPFPPFIQEIINANGYLNWIAKN 161
>gi|121533304|ref|ZP_01665132.1| 3-isopropylmalate dehydratase, small subunit [Thermosinus
carboxydivorans Nor1]
gi|121307863|gb|EAX48777.1| 3-isopropylmalate dehydratase, small subunit [Thermosinus
carboxydivorans Nor1]
Length = 163
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 93/172 (54%), Gaps = 15/172 (8%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
G + GDN+DTD IIPA YL N + +L ++ + + + +
Sbjct: 3 LEGKVWRYGDNVDTDVIIPARYL-----NTADPRELAAHCMEDIDPAFAGQV-------A 50
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
II+AG NFGCGSSREHAP+A+ G + VVA+S+ARIF+RN++ G P+
Sbjct: 51 VGDIIVAGKNFGCGSSREHAPLAIKGCGVACVVADSFARIFYRNAINIG--LPVIELGDA 108
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLGPVI-DAGGIFAYARK 240
+ G + I++A R+ N TTG+ + +P+ + I AGG+ AY ++
Sbjct: 109 VAGIAAGHRLRIDLAAGRVENVTTGEVFNAQPLPEFVQAIAKAGGLIAYVKE 160
>gi|392408912|ref|YP_006445519.1| 3-isopropylmalate dehydratase, small subunit [Desulfomonile tiedjei
DSM 6799]
gi|390622048|gb|AFM23255.1| 3-isopropylmalate dehydratase, small subunit [Desulfomonile tiedjei
DSM 6799]
Length = 170
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 98/174 (56%), Gaps = 17/174 (9%)
Query: 69 TFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETK 128
F G + GD+++TD+IIPA YL+L S+P E L + + + ++
Sbjct: 2 VFKGRTWKFGDDVNTDEIIPARYLSL--SHPTE---LAEHVMEDADPEFPSKV------- 49
Query: 129 TKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG-EIYPLDSEA 187
II+AG NFGCGSSREHAPVA+ A S V+A+S+ARIFFRN+ TG I+ A
Sbjct: 50 KPGDIIVAGKNFGCGSSREHAPVAIKGAKVSCVIAKSFARIFFRNAFNTGLLIFEAPGAA 109
Query: 188 RLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
+E G V ++ + + N +TG+ +K+ I + ++D GG+ A+ +K
Sbjct: 110 DAIQE---GHEVEVDPDQGIIRNLSTGEVFKVAAIPPFMKELLDDGGLIAHIKK 160
>gi|206901479|ref|YP_002250914.1| 3-isopropylmalate dehydratase, small subunit [Dictyoglomus
thermophilum H-6-12]
gi|206740582|gb|ACI19640.1| 3-isopropylmalate dehydratase, small subunit [Dictyoglomus
thermophilum H-6-12]
Length = 167
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 94/172 (54%), Gaps = 15/172 (8%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
+ G GDNIDTD IIPA YL ++P E L + + L + + +++
Sbjct: 3 YRGKALKYGDNIDTDVIIPARYLN--TTDPKE---LAEHCMEDLDLNFKEKVKEKD---- 53
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
I++ G NFGCGSSREHAP+A+ A+G ++A+S+ARIF+RN++ G P+
Sbjct: 54 ---ILVVGENFGCGSSREHAPIAIKASGVKCIIAKSFARIFYRNAINIG--LPILEVPEA 108
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDL-GPVIDAGGIFAYARK 240
++ + GD + ++ + N TTG+ + P L +I GG+ +A++
Sbjct: 109 VDKINEGDELEVDFDRGIVKNLTTGESFNTFPFPPLIQEIIKKGGLINFAKE 160
>gi|315652007|ref|ZP_07905008.1| 3-isopropylmalate dehydratase small subunit [Lachnoanaerobaculum
saburreum DSM 3986]
gi|315485654|gb|EFU76035.1| 3-isopropylmalate dehydratase small subunit [Lachnoanaerobaculum
saburreum DSM 3986]
Length = 163
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 93/167 (55%), Gaps = 15/167 (8%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + G+N+DTD IIPA YL N ++L + + + + + K
Sbjct: 5 GHVFKYGENVDTDVIIPARYL-----NATTGDELAKHCMEDIDKDFVNKV-------HKG 52
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
II+A NFGCGSSREHAP+A+ ++G S V+A+++ARIF+RN++ G P+ +
Sbjct: 53 DIIVARKNFGCGSSREHAPLAIKSSGVSVVIADTFARIFYRNAINIG--LPIIESPQAAA 110
Query: 192 ECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAY 237
+ + GD V ++ + + TTGK YK + + + +I+AGG+ Y
Sbjct: 111 QINEGDDVKVDFDTGIITDITTGKTYKGQAFPEFMQNIINAGGLINY 157
>gi|78043773|ref|YP_359381.1| 3-isopropylmalate dehydratase small subunit [Carboxydothermus
hydrogenoformans Z-2901]
gi|77995888|gb|ABB14787.1| 3-isopropylmalate dehydratase, small subunit [Carboxydothermus
hydrogenoformans Z-2901]
Length = 162
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/167 (38%), Positives = 91/167 (54%), Gaps = 15/167 (8%)
Query: 75 YVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKII 134
+ GD+IDTD IIPA YL S+P E L + + ++ + +I
Sbjct: 4 FKFGDDIDTDVIIPARYLNT--SDPLE---LAKHCMEDADPEFSKK-------ARPGDVI 51
Query: 135 IAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEECS 194
+AG NFGCGSSREHAP+A+ A G AV+A+S+ARIF+RNS G EA E+
Sbjct: 52 VAGKNFGCGSSREHAPIAIKALGIEAVIAKSFARIFYRNSFNIGLKILECPEA--AEKIR 109
Query: 195 TGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
GD ++I + N TTG+ Y KPI + + +I GG+ Y R+
Sbjct: 110 DGDELSINYDTGEIKNLTTGESYFAKPIPEFMQNIIAKGGLINYVRE 156
>gi|452210063|ref|YP_007490177.1| 3-isopropylmalate dehydratase small subunit [Methanosarcina mazei
Tuc01]
gi|452099965|gb|AGF96905.1| 3-isopropylmalate dehydratase small subunit [Methanosarcina mazei
Tuc01]
Length = 149
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/156 (36%), Positives = 87/156 (55%), Gaps = 15/156 (9%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
G + GD++DTD +IP YL + P E L Y G+ + + + EN+
Sbjct: 1 MKGRAWKFGDDVDTDAVIPGRYLIF--NTPGE---LAKYTFEGVRPDFA-KNVHEND--- 51
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
I++AG NFGCGSSREHAP+AL + S V+A+S+ARIFFRN++ G P+ E
Sbjct: 52 ---IVVAGSNFGCGSSREHAPLALKGSKVSCVIAKSFARIFFRNAINIG--VPV-LECPD 105
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDL 225
++ GD + ++I+ + N T G+ Y+ P+ D
Sbjct: 106 TDKIDDGDELEVDISTGVIQNRTKGETYQATPLPDF 141
>gi|386762691|ref|YP_006236327.1| 3-isopropylmalate dehydratase small subunit [Helicobacter cinaedi
PAGU611]
gi|385147708|dbj|BAM13216.1| 3-isopropylmalate dehydratase small subunit [Helicobacter cinaedi
PAGU611]
Length = 163
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 90/172 (52%), Gaps = 15/172 (8%)
Query: 71 HGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTK 130
G + GDN+DTD IIPA YL N ++ +L S+ + + + + N
Sbjct: 4 QGFIHKYGDNVDTDVIIPARYL-----NTADHRELASHCMEDIDKDFVKKVKVGN----- 53
Query: 131 YKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLC 190
I++ G NFGCGSSREHAP+A+ A+G S ++A+S+ARIF+RN++ G + +
Sbjct: 54 --IMVGGWNFGCGSSREHAPIAIKASGISCIIAKSFARIFYRNAINIG--LAIIESQEIA 109
Query: 191 EECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARKT 241
+ GD V+I+ + +I + K + P + +I+A G + K
Sbjct: 110 DFLQEGDSVSIDFDKGEIIESKSQKSFSTTPFPPFIQEIINANGYLNWIAKN 161
>gi|163816823|ref|ZP_02208186.1| hypothetical protein COPEUT_03013 [Coprococcus eutactus ATCC 27759]
gi|158448080|gb|EDP25075.1| 3-isopropylmalate dehydratase, small subunit [Coprococcus eutactus
ATCC 27759]
Length = 162
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/148 (39%), Positives = 79/148 (53%), Gaps = 14/148 (9%)
Query: 71 HGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTK 130
HG + GDN+DTD IIPA YL S+P E L + + + R
Sbjct: 4 HGTVHKYGDNVDTDVIIPARYLN--SSDPAE---LAKSCMEDIDKDFVKRV-------KP 51
Query: 131 YKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLC 190
II+A NFGCGSSREHAP+A+ A+G S V+AE++ARIF+RN++ G P+
Sbjct: 52 GDIIVARKNFGCGSSREHAPIAIKASGISCVIAETFARIFYRNAINIG--LPIIECPEAA 109
Query: 191 EECSTGDVVTIEIAESRLINHTTGKEYK 218
E GD V I+ + + T G E+K
Sbjct: 110 EAIQAGDDVEIDFDSGMIYDRTQGTEFK 137
>gi|295102381|emb|CBK99926.1| 3-isopropylmalate dehydratase, small subunit [Faecalibacterium
prausnitzii L2-6]
Length = 162
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 83/151 (54%), Gaps = 14/151 (9%)
Query: 71 HGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTK 130
+G + DN+DTD IIPA +L N + +L S+ + + + D +
Sbjct: 5 NGSVFKYPDNVDTDVIIPARHL-----NTQDARELASHCMEDIDKDFINNVKDGD----- 54
Query: 131 YKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLC 190
I++ G NFGCGSSREHAP+A+ AG S V+A+S+ARIF+RNS+ G P+
Sbjct: 55 --IMVGGWNFGCGSSREHAPLAIKTAGISVVIAKSFARIFYRNSINIG--LPIMECPEAV 110
Query: 191 EECSTGDVVTIEIAESRLINHTTGKEYKLKP 221
+ S GD V++ + + TTGK ++ +P
Sbjct: 111 DAISAGDTVSVNFDTGIITDETTGKTFQAEP 141
>gi|225573487|ref|ZP_03782242.1| hypothetical protein RUMHYD_01679 [Blautia hydrogenotrophica DSM
10507]
gi|225039136|gb|EEG49382.1| 3-isopropylmalate dehydratase, small subunit [Blautia
hydrogenotrophica DSM 10507]
Length = 164
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/170 (37%), Positives = 90/170 (52%), Gaps = 19/170 (11%)
Query: 71 HGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT- 129
+G + GDN+DTD IIPA YL S+P E AT+ ID+ K
Sbjct: 4 NGTVFKYGDNVDTDVIIPARYLN--SSDPAEL------------ATHCMEDIDKEFVKKV 49
Query: 130 -KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEAR 188
K II+A NFGCGSSREHAP+A+ AAG S V+A+++ARIF+RN++ G P+
Sbjct: 50 RKGDIIVADKNFGCGSSREHAPLAIKAAGVSCVIAQTFARIFYRNAINIG--LPIIECPE 107
Query: 189 LCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAY 237
GD V ++ + N T G ++K + + + +I A G+ Y
Sbjct: 108 ASRGIEDGDQVEVDFDSGMIYNRTKGTQFKGQAFPEFMQKIIAAEGLVNY 157
>gi|296127242|ref|YP_003634494.1| 3-isopropylmalate dehydratase small subunit [Brachyspira murdochii
DSM 12563]
gi|445062380|ref|ZP_21374774.1| 3-isopropylmalate dehydratase small subunit [Brachyspira hampsonii
30599]
gi|296019058|gb|ADG72295.1| 3-isopropylmalate dehydratase, small subunit [Brachyspira murdochii
DSM 12563]
gi|444506248|gb|ELV06616.1| 3-isopropylmalate dehydratase small subunit [Brachyspira hampsonii
30599]
Length = 162
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 95/176 (53%), Gaps = 23/176 (13%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + G+N+DTD IIPA YL N +++L ++ + + + ++ K
Sbjct: 5 GFVHKYGNNVDTDVIIPARYL-----NTANHKELAAHCMEDIDKDFVSKV-------KKG 52
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
I++ G NFGCGSSREHAP+A+ +G S V+A S+ARIF+RNS+ G + L+ CE
Sbjct: 53 DIMVGGENFGCGSSREHAPIAIKESGISCVIASSFARIFYRNSINIG-LAILE-----CE 106
Query: 192 ECS----TGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARKTG 242
E S GD V ++ + N T + YK +P + + +I++ G+ + G
Sbjct: 107 EASKKIDNGDEVEVDFDSGVITNITKNESYKAEPFPEFIKNIINSNGLLNSIKNKG 162
>gi|357056680|ref|ZP_09117717.1| 3-isopropylmalate dehydratase small subunit [Clostridium
clostridioforme 2_1_49FAA]
gi|355379847|gb|EHG26997.1| 3-isopropylmalate dehydratase small subunit [Clostridium
clostridioforme 2_1_49FAA]
Length = 161
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 87/169 (51%), Gaps = 19/169 (11%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + GDN+DTD IIPA YL N + ++L + + + + + K
Sbjct: 5 GHVFKYGDNVDTDVIIPARYL-----NATQGDELAKHCMEDIDREFVNKV-------QKG 52
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
II+A NFGCGSSREHAP+A+ AG S V+AE++ARIF+RNS+ G P+
Sbjct: 53 DIIVANKNFGCGSSREHAPLAIKCAGVSCVIAETFARIFYRNSINIG--LPIIECLEAAR 110
Query: 192 ECSTGDVVTIEIAESRLINHTTGKEYK---LKPIGDLGPVIDAGGIFAY 237
GD V ++ + N T G+ Y+ P + +I AGG+ Y
Sbjct: 111 SIEAGDEVEVDFDSGIITNKTKGETYQGQSFPPF--MQKIISAGGLVNY 157
>gi|147918944|ref|YP_687330.1| 3-isopropylmalate dehydratase, small subunit [Methanocella
arvoryzae MRE50]
gi|110622726|emb|CAJ38004.1| 3-isopropylmalate dehydratase, small subunit [Methanocella
arvoryzae MRE50]
Length = 173
Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 91/162 (56%), Gaps = 12/162 (7%)
Query: 80 NIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKIIIAGGN 139
+ +TD++I +Y + + +KL +A + T+ T + K K I++A N
Sbjct: 17 DTNTDEVISGKY----KYDELDLKKLAVHAFESIDPTFYT-----DAQKVKSPILVAANN 67
Query: 140 FGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEECSTGDVV 199
FGCGSSRE AP + A S ++AESYARIF+RN G PL + + GD +
Sbjct: 68 FGCGSSREQAPQVIMACDVSCIIAESYARIFYRNGFNIG--LPLIECKGISKAAKQGDEL 125
Query: 200 TIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
++ A++ +INHTTG+ +KPI + + +++AGG+ Y +K
Sbjct: 126 EVDFAKNLVINHTTGQTLPMKPIPEFMQQLLEAGGLMPYLKK 167
>gi|336477573|ref|YP_004616714.1| 3-isopropylmalate dehydratase small subunit [Methanosalsum zhilinae
DSM 4017]
gi|335930954|gb|AEH61495.1| 3-isopropylmalate dehydratase, small subunit [Methanosalsum
zhilinae DSM 4017]
Length = 160
Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/172 (37%), Positives = 98/172 (56%), Gaps = 20/172 (11%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
G + G+NIDTD IIP +YL + + +A+ G+ +T E +
Sbjct: 4 IRGRAWKYGNNIDTDVIIPGKYLRTT-----DMQVFADHAMEGIDPQFT-------EKIS 51
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
+ +I+AG NFGCGSSRE AP+AL AG S V+A+S+ RIFFRN++ G P+ EA +
Sbjct: 52 RGDLIVAGHNFGCGSSREQAPLALKYAGISCVIAKSFGRIFFRNAINVG--LPV-VEADI 108
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
EC+ GD++ +++ E LI T K Y+ + D L ++ GG+ A+ +K
Sbjct: 109 --ECNEGDIIEVDL-EKGLIK-TPEKTYQSNRLPDFLLEILKDGGLVAHRKK 156
>gi|182419461|ref|ZP_02950713.1| 3-isopropylmalate dehydratase, small subunit [Clostridium butyricum
5521]
gi|237666517|ref|ZP_04526502.1| 3-isopropylmalate dehydratase, small subunit [Clostridium butyricum
E4 str. BoNT E BL5262]
gi|182376792|gb|EDT74364.1| 3-isopropylmalate dehydratase, small subunit [Clostridium butyricum
5521]
gi|237657716|gb|EEP55271.1| 3-isopropylmalate dehydratase, small subunit [Clostridium butyricum
E4 str. BoNT E BL5262]
Length = 161
Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 92/174 (52%), Gaps = 15/174 (8%)
Query: 69 TFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETK 128
+ G + GDN+DTD IIPA YL N + ++L ++ + + A + D +
Sbjct: 2 SVKGRVFKYGDNVDTDVIIPARYL-----NTSDAKELAAHCMEDIDADFVKNVKDGD--- 53
Query: 129 TKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEAR 188
II+A NFGCGSSREHAP+A+ AG S V+A ++ARIF+RNS+ G P+
Sbjct: 54 ----IIVANKNFGCGSSREHAPLAIKTAGVSCVIASTFARIFYRNSINIG--LPILECDE 107
Query: 189 LCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARKT 241
+ GD + ++ + N T +EY+ + + + +ID G+ Y + +
Sbjct: 108 AVKNIDAGDELEVDFKSGLIKNLTKNQEYQGEGFPEFMQKIIDNDGLIGYIKNS 161
>gi|148642907|ref|YP_001273420.1| 3-isopropylmalate dehydratase small subunit [Methanobrevibacter
smithii ATCC 35061]
gi|148551924|gb|ABQ87052.1| 3-isopropylmalate dehydratase, small subunit, LeuD
[Methanobrevibacter smithii ATCC 35061]
Length = 161
Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 84/151 (55%), Gaps = 19/151 (12%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + G+NIDTD IIP YL NP + L + L G +T K
Sbjct: 6 GKTWTFGENIDTDVIIPGRYLRTF--NP---QDLADHVLEGERPDFTKNV-------KKG 53
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
II+A NFGCGSSRE APVA+ AG A+VA+S+ARIF+RN++ G P+ +C+
Sbjct: 54 DIIVADENFGCGSSREQAPVAIKTAGVDAIVAKSFARIFYRNAINIG--LPV----IVCD 107
Query: 192 -ECSTGDVVTIEIAESRLINHTTGKEYKLKP 221
+ GD++ I++++ L N TTG+ +P
Sbjct: 108 IQAKDGDIINIDLSKGILTNETTGESVTFEP 138
>gi|389575798|ref|ZP_10165826.1| 3-isopropylmalate dehydratase, small subunit [Eubacterium
cellulosolvens 6]
gi|389311283|gb|EIM56216.1| 3-isopropylmalate dehydratase, small subunit [Eubacterium
cellulosolvens 6]
Length = 162
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 94/171 (54%), Gaps = 23/171 (13%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + GDN+DTD IIPA YL S+P E AT+ ID++ K
Sbjct: 5 GTVFKYGDNVDTDVIIPARYLN--SSDPAEL------------ATHCMEDIDKSFAKKVQ 50
Query: 132 --KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
II+A NFGCGSSREHAP+++ A+G S V+AE++ARIF+RN++ G P+
Sbjct: 51 AGDIIVANKNFGCGSSREHAPISIKASGVSCVIAETFARIFYRNAINIG--LPIIECPEA 108
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYK---LKPIGDLGPVIDAGGIFAY 237
+ + GD V+I+ + + TTG++++ P + +I AGG+ Y
Sbjct: 109 AKAINAGDEVSIDFDSGLITDVTTGQKFQGQAFPPF--MQNLIHAGGLVNY 157
>gi|302386582|ref|YP_003822404.1| 3-isopropylmalate dehydratase small subunit [Clostridium
saccharolyticum WM1]
gi|302197210|gb|ADL04781.1| 3-isopropylmalate dehydratase, small subunit [Clostridium
saccharolyticum WM1]
Length = 162
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/173 (35%), Positives = 89/173 (51%), Gaps = 21/173 (12%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + GDN+DTD IIPA YL + N +L + + + + T K
Sbjct: 5 GSVFKYGDNVDTDVIIPARYLNITDGN-----ELAKHCMEDIDKNFVTNV-------KKG 52
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG-EIYPLDSEARLC 190
II+A NFGCGSSREHAP+ + AG S V+AE++ARIF+RN++ G I AR
Sbjct: 53 DIIVANKNFGCGSSREHAPLVIKCAGVSCVIAETFARIFYRNAINIGLPIIECPEAARAI 112
Query: 191 EECSTGDVVTIEIAESRLINHTTGKEYK---LKPIGDLGPVIDAGGIFAYARK 240
E G V ++ + + TTG+ ++ P + +I AGG+F Y K
Sbjct: 113 E---AGSEVEVDFDSGIITDRTTGESFQGQAFPPF--MQEIISAGGLFPYINK 160
>gi|32266634|ref|NP_860666.1| 3-isopropylmalate dehydratase [Helicobacter hepaticus ATCC 51449]
gi|38604727|sp|Q7VH32.1|LEUD_HELHP RecName: Full=3-isopropylmalate dehydratase small subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|32262685|gb|AAP77732.1| 3-isopropylmalate dehydratase [Helicobacter hepaticus ATCC 51449]
Length = 165
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 96/171 (56%), Gaps = 15/171 (8%)
Query: 71 HGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTK 130
G + GDN+DTD IIPA YL N ++++L ++ + + + + + E +
Sbjct: 4 QGFVHKYGDNVDTDVIIPARYL-----NTADHKELANHCMEDIDKDFVAK-VKEGD---- 53
Query: 131 YKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLC 190
I++ G NFGCGSSREHAP+A+ A+G S ++A+S+ARIF+RN++ G + ++SE +
Sbjct: 54 --IMVGGWNFGCGSSREHAPIAIKASGISCIIAKSFARIFYRNAINIG-LAIIESE-EVA 109
Query: 191 EECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
+ GD V I+ + + N +++ P + +I+A G + K
Sbjct: 110 QSLENGDEVAIDFDKGIITNCKNNQQFSTTPFPPFIQEIINANGYLNWISK 160
>gi|222445140|ref|ZP_03607655.1| hypothetical protein METSMIALI_00761 [Methanobrevibacter smithii
DSM 2375]
gi|288869688|ref|ZP_05975709.2| 3-isopropylmalate dehydratase, small subunit [Methanobrevibacter
smithii DSM 2374]
gi|222434705|gb|EEE41870.1| 3-isopropylmalate dehydratase, small subunit [Methanobrevibacter
smithii DSM 2375]
gi|288861076|gb|EFC93374.1| 3-isopropylmalate dehydratase, small subunit [Methanobrevibacter
smithii DSM 2374]
Length = 164
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 85/151 (56%), Gaps = 19/151 (12%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + G+NIDTD IIP YL NP + L + L G +T + K
Sbjct: 9 GKTWTFGENIDTDVIIPGRYLRTF--NP---QDLADHVLEGERPDFT-------KNVKKG 56
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
II+A NFGCGSSRE APVA+ AG A+VA+S+ARIF+RN++ G P+ +C+
Sbjct: 57 DIIVADENFGCGSSREQAPVAIKTAGVDAIVAKSFARIFYRNAINIG--LPV----IVCD 110
Query: 192 -ECSTGDVVTIEIAESRLINHTTGKEYKLKP 221
+ GD++ I++++ L N TTG+ +P
Sbjct: 111 IQAKDGDIINIDLSKGILTNETTGESVTFEP 141
>gi|352681362|ref|YP_004891886.1| 3-isopropylmalate dehydratase small subunit [Thermoproteus tenax
Kra 1]
gi|41033701|emb|CAF18517.1| 3-isopropylmalate dehydratase small subunit [Thermoproteus tenax]
gi|350274161|emb|CCC80806.1| 3-isopropylmalate dehydratase small subunit [Thermoproteus tenax
Kra 1]
Length = 162
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/174 (39%), Positives = 92/174 (52%), Gaps = 17/174 (9%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
G V GD IDTD IIPA YL V ++P LG +A+ L + K
Sbjct: 3 IRGRALVYGDKIDTDVIIPARYL--VYTDP---AVLGQHAMEPLDPEFPK--------KA 49
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
K +I+AG FG GSSRE A AL AG AVVAES+ARIFFRN++ G + L + AR
Sbjct: 50 KGAVIVAGRAFGMGSSREQAATALKGAGVLAVVAESFARIFFRNAINVG-LPVLQAPAR- 107
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLG-PVIDAGGIFAYARKTG 242
GD V + + ++N +TG+ K KP+ L ++ AGG+ Y + G
Sbjct: 108 -GRVRDGDEVVVRVETGEVVNLSTGEVIKGKPLSGLALEILKAGGLTEYLKIRG 160
>gi|451817148|ref|YP_007453349.1| 3-isopropylmalate dehydratase small subunit LeuD [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
gi|451783127|gb|AGF54095.1| 3-isopropylmalate dehydratase small subunit LeuD [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
Length = 161
Score = 97.1 bits (240), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 91/172 (52%), Gaps = 15/172 (8%)
Query: 69 TFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETK 128
+ G + GDN+DTD IIPA YL N + ++L ++ + + + D +
Sbjct: 2 SVKGKVFKYGDNVDTDVIIPARYL-----NTSDAKELAAHCMEDIDVNFVKNVKDGD--- 53
Query: 129 TKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEAR 188
II+A NFGCGSSREHAP+A+ AG S V+A ++ARIF+RNS+ G P+
Sbjct: 54 ----IIVANKNFGCGSSREHAPLAIKTAGVSCVIASTFARIFYRNSINIG--LPILECEE 107
Query: 189 LCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYAR 239
+ GD + ++ + + N + +EY+ + + + +ID G+ Y R
Sbjct: 108 AVKNIDAGDELEVDFSTGLIKNLSKNQEYQGEAFPEFMQKIIDNDGLIGYIR 159
>gi|408420668|ref|YP_006762082.1| 3-isopropylmalate dehydratase, small subunit LeuD [Desulfobacula
toluolica Tol2]
gi|405107881|emb|CCK81378.1| LeuD: 3-isopropylmalate dehydratase, small subunit [Desulfobacula
toluolica Tol2]
Length = 165
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/170 (37%), Positives = 93/170 (54%), Gaps = 15/170 (8%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
GL + G NIDTD IIPA+Y L P+ E LG + L L + +
Sbjct: 4 GLLHKYGANIDTDVIIPAKYANL-PTP----EDLGKHCLENLDDQFV-------QNVKPG 51
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
I++A NFGCGSSRE AP ++ AG S ++A+S+ARIFFRN++ PL +
Sbjct: 52 DILMASTNFGCGSSREQAPWSIKGAGVSCIIAKSFARIFFRNAINIA--LPLMECPEAVD 109
Query: 192 ECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
+GDV+ I+++ + N T K +K P D + +I+AGG+ +Y +K
Sbjct: 110 GSESGDVLKIDLSAGIIENITREKVFKATPYPDFISELINAGGLVSYTKK 159
>gi|354559401|ref|ZP_08978650.1| 3-isopropylmalate dehydratase small subunit [Desulfitobacterium
metallireducens DSM 15288]
gi|353542297|gb|EHC11760.1| 3-isopropylmalate dehydratase small subunit [Desulfitobacterium
metallireducens DSM 15288]
Length = 162
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 88/166 (53%), Gaps = 15/166 (9%)
Query: 75 YVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKII 134
+ GD++DTD IIPA YL N E L ++ + T F + +I
Sbjct: 5 WRFGDDVDTDVIIPARYL-----NQTSPEHLAAHCM----EDADTHFAQAVKVG---DVI 52
Query: 135 IAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEECS 194
+ G NFGCGSSREHAP+A+ +AG V+AES+ARIF+RNS+ G P+ +
Sbjct: 53 VGGKNFGCGSSREHAPLAIKSAGVQVVIAESFARIFYRNSLNIG--LPILECPEAVQGIQ 110
Query: 195 TGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYAR 239
GD V++ ++ + N T G Y+ +P + +I AGG+ Y +
Sbjct: 111 AGDDVSVNLSTGEIQNITRGASYQARPFPPFMQELIKAGGLIPYVK 156
>gi|15669457|ref|NP_248267.1| 3-isopropylmalate dehydratase LeuD [Methanocaldococcus jannaschii
DSM 2661]
gi|3122344|sp|Q58667.1|HACB_METJA RecName: Full=Homoaconitase small subunit; Short=HACN; AltName:
Full=(R)-homocitrate dehydratase; AltName:
Full=Homoaconitate hydratase; AltName: Full=Methanogen
homoaconitase
gi|185177549|pdb|2PKP|A Chain A, Crystal Structure Of 3-Isopropylmalate Dehydratase (Leud)
From Methhanocaldococcus Jannaschii Dsm2661 (Mj1271)
gi|1591907|gb|AAB99277.1| 3-isopropylmalate dehydratase (leuD) [Methanocaldococcus jannaschii
DSM 2661]
Length = 170
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 97/179 (54%), Gaps = 17/179 (9%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
G + GD++DTD IIP YL D YE L S+ + G+ + + + +
Sbjct: 3 IKGRAHKFGDDVDTDAIIPGPYL----RTTDPYE-LASHCMAGIDENFPKKVKEGD---- 53
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
+I+AG NFGCGSSRE A +A+ G AV+A+S+ARIF+RN++ G I P+ +
Sbjct: 54 ---VIVAGENFGCGSSREQAVIAIKYCGIKAVIAKSFARIFYRNAINVGLI-PIIANT-- 107
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLK-PIGDLGPVIDAGGIFAYARKTGMIASR 247
+E GD+V I++ + ++ K K + P G ++ AGG+ Y +K +I S+
Sbjct: 108 -DEIKDGDIVEIDLDKEEIVITNKNKTIKCETPKGLEREILAAGGLVNYLKKRKLIQSK 165
>gi|327311186|ref|YP_004338083.1| 3-isopropylmalate dehydratase small subunit [Thermoproteus
uzoniensis 768-20]
gi|326947665|gb|AEA12771.1| 3-isopropylmalate dehydratase small subunit [Thermoproteus
uzoniensis 768-20]
Length = 162
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 70/171 (40%), Positives = 93/171 (54%), Gaps = 17/171 (9%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
G V GD IDTD IIPA YL V ++P + LG +A+ L + K
Sbjct: 3 IRGRALVYGDKIDTDIIIPARYL--VYTDP---KILGEHAMEPLDPDFPK--------KA 49
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
K I++AG FG GSSRE A AL AG AVVAES+ARIFFRN+V G + L + AR
Sbjct: 50 KGAILVAGRAFGMGSSREQAATALKGAGVLAVVAESFARIFFRNAVNVG-LPVLQAPAR- 107
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPI-GDLGPVIDAGGIFAYAR 239
GD + + + ++N TTG+ K KP+ G + +I AGG+ Y +
Sbjct: 108 -GRVREGDELLVRLDAGEVVNLTTGEVIKGKPLSGLVLDIIKAGGLVEYLK 157
>gi|298674061|ref|YP_003725811.1| 3-isopropylmalate dehydratase small subunit [Methanohalobium
evestigatum Z-7303]
gi|298287049|gb|ADI73015.1| 3-isopropylmalate dehydratase, small subunit [Methanohalobium
evestigatum Z-7303]
Length = 160
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 96/178 (53%), Gaps = 28/178 (15%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
G + G++IDTD IIP YL + P+E L +A G+ + + EN+
Sbjct: 1 MKGKVWKFGEDIDTDAIIPGRYLIF--NTPEE---LAKHAFEGIRPDFAEN-VKEND--- 51
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
II+AG NFGCGSSREHAP+AL V+A+S+ARIFFRN++ G PL
Sbjct: 52 ---IIVAGSNFGCGSSREHAPLALKGTKIGCVIAKSFARIFFRNAINIG--VPL------ 100
Query: 190 CEECSTGD------VVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
ECS D + +E++ + N T ++Y+ P+ D + ++DAGG+ Y +K
Sbjct: 101 -LECSETDKIEEEDEIEVELSTGVIENKTKNEKYQATPLPDFVREIVDAGGLIEYTKK 157
>gi|295099776|emb|CBK88865.1| 3-isopropylmalate dehydratase, small subunit [Eubacterium
cylindroides T2-87]
Length = 164
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 90/170 (52%), Gaps = 15/170 (8%)
Query: 71 HGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTK 130
G + GDN+DTD IIPA YL +N L ++ + + + + E+
Sbjct: 5 QGKVFKYGDNVDTDVIIPARYLNTPDANA-----LAAHCMEDIDKDFVKQVKPED----- 54
Query: 131 YKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLC 190
II+AG NFGCGSSREHAP+A+ V+A+S+ARIF+RN++ G P+ C
Sbjct: 55 --IIVAGYNFGCGSSREHAPLAIKTCQVGCVIAKSFARIFYRNAINIG--MPILECEEAC 110
Query: 191 EECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYAR 239
++ GD V ++ + + T +++ +P + + +ID GG+ A R
Sbjct: 111 DKIQAGDEVHVDFKTGVIHDITQDLQWQAEPFPEFIQDIIDKGGLMASLR 160
>gi|325970786|ref|YP_004246977.1| 3-isopropylmalate dehydratase small subunit [Sphaerochaeta globus
str. Buddy]
gi|324026024|gb|ADY12783.1| 3-isopropylmalate dehydratase small subunit [Sphaerochaeta globus
str. Buddy]
Length = 165
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 90/173 (52%), Gaps = 15/173 (8%)
Query: 71 HGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTK 130
G + GDN+DTD IIPA YL N +++L + + + + +
Sbjct: 4 QGSVFRYGDNVDTDVIIPARYL-----NTSNHKELAQHCMEDIDQDFIKQV-------KS 51
Query: 131 YKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLC 190
I++A NFGCGSSREHAP+A+ +G S V+A ++ARIF+RN++ G P+ C
Sbjct: 52 GDIMVADKNFGCGSSREHAPIAIKESGISCVIARTFARIFYRNAINIG--LPILECPEAC 109
Query: 191 EECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARKTG 242
+ GDVV+++ + + N TT + +P + +I GG+ Y K G
Sbjct: 110 DGIKAGDVVSVDFSSGTITNVTTKAVFHSEPFPPFMQDLIANGGLAGYIAKKG 162
>gi|374629001|ref|ZP_09701386.1| 3-isopropylmalate dehydratase small subunit [Methanoplanus limicola
DSM 2279]
gi|373907114|gb|EHQ35218.1| 3-isopropylmalate dehydratase small subunit [Methanoplanus limicola
DSM 2279]
Length = 162
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/170 (37%), Positives = 101/170 (59%), Gaps = 24/170 (14%)
Query: 75 YVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKII 134
+ G +IDTD IIP YLT+ DE E L S+A G ++ D + +I
Sbjct: 4 WKFGSDIDTDAIIPGRYLTIY----DEKE-LASHAFEGTRDEFSAEAKDGD-------VI 51
Query: 135 IAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLC---E 191
+A NFGCGSSREHAP+AL AG ++A+S+ARIF+RN++ TG + P+ +C +
Sbjct: 52 VASRNFGCGSSREHAPLALRGAGVKVILAKSFARIFYRNAINTG-LLPV-----ICPCAD 105
Query: 192 ECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
E G + I+ +E R + + G +Y+L+P+ + + ++DAGG+ YA++
Sbjct: 106 EIEDGAGIEID-SEFRYV-MSGGNKYELEPVPEFMKHIVDAGGLVNYAKE 153
>gi|225569118|ref|ZP_03778143.1| hypothetical protein CLOHYLEM_05198 [Clostridium hylemonae DSM
15053]
gi|225161917|gb|EEG74536.1| hypothetical protein CLOHYLEM_05198 [Clostridium hylemonae DSM
15053]
Length = 163
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 58/167 (34%), Positives = 90/167 (53%), Gaps = 15/167 (8%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + GDN+DTD IIPA YL N + ++L S+A++ + + +
Sbjct: 5 GHVFKYGDNVDTDVIIPARYL-----NSFDGKELASHAMVDIDPEFAGKV-------KPG 52
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
+I+A NFGCGSSREHAP+ L AG S V+AE++ARIF+RN++ G P+ +
Sbjct: 53 DMIVARKNFGCGSSREHAPLCLKEAGVSCVIAETFARIFYRNAINIG--LPIIECPEAAQ 110
Query: 192 ECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAY 237
GD V ++ + N T K ++ +P + + +I AGG+ Y
Sbjct: 111 GIEAGDEVEVDFDSGMIYNKTKDKSFQGQPFPEFMQKLIAAGGLVNY 157
>gi|160881479|ref|YP_001560447.1| 3-isopropylmalate dehydratase small subunit [Clostridium
phytofermentans ISDg]
gi|226736044|sp|A9KT78.1|LEUD_CLOPH RecName: Full=3-isopropylmalate dehydratase small subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|160430145|gb|ABX43708.1| 3-isopropylmalate dehydratase, small subunit [Clostridium
phytofermentans ISDg]
Length = 165
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 88/168 (52%), Gaps = 15/168 (8%)
Query: 71 HGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTK 130
HG+ + GDN+DTD IIPA YL S+P E L + + + R
Sbjct: 4 HGIVHKYGDNVDTDVIIPARYLN--SSDPKE---LAKKCMEDIDKEFVNRV-------NL 51
Query: 131 YKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLC 190
I++A NFGCGSSREHAP+A+ A+G S V+AE++ARIF+RN++ G P+
Sbjct: 52 GDIMVANKNFGCGSSREHAPIAIKASGISCVIAETFARIFYRNAINIG--LPIIECKEAA 109
Query: 191 EECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAY 237
+ G+ V I+ + N T G Y+ + + + ++ A G+ Y
Sbjct: 110 RDIDAGNEVEIDFDSGIITNLTKGTSYQGQAFPEFMQKIMKADGLINY 157
>gi|373107480|ref|ZP_09521779.1| 3-isopropylmalate dehydratase small subunit [Stomatobaculum longum]
gi|371651310|gb|EHO16744.1| 3-isopropylmalate dehydratase small subunit [Stomatobaculum longum]
Length = 163
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 93/173 (53%), Gaps = 20/173 (11%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
F G + +GD+IDTD I+P EYL P+ ++ YA L +
Sbjct: 4 FQGKVWKLGDDIDTDIILPTEYLVF-PT----IAEMKPYAFSPLRPELAGKI-------E 51
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEAR- 188
II+ G NFGCGSSRE AP + A G AV+A+S+ARIFFRN++ G + E R
Sbjct: 52 PGDIIVGGENFGCGSSREQAPEVVKALGIRAVIAKSFARIFFRNAINNGLLL---IECRD 108
Query: 189 LCEECSTGDVVTIEIAESRLINHTTGKEYKLKPI-GDLGPVIDAGGIFAYARK 240
L +E S GD +T+ + E N GK+YK+ + +L +++AGG+ RK
Sbjct: 109 LPDEVSEGDTLTVTVGEKIRAN---GKDYKIAALPENLMEILNAGGLVKAMRK 158
>gi|294494815|ref|YP_003541308.1| 3-isopropylmalate dehydratase, small subunit [Methanohalophilus
mahii DSM 5219]
gi|292665814|gb|ADE35663.1| 3-isopropylmalate dehydratase, small subunit [Methanohalophilus
mahii DSM 5219]
Length = 160
Score = 96.7 bits (239), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 94/176 (53%), Gaps = 20/176 (11%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G ++ GD++DTD IIP +YL + + +A+ G+ ++++ +
Sbjct: 4 GKAWIFGDDVDTDVIIPGKYLRTT-----DMQVFADHAMEGIDPDFSSKV-------SPG 51
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
II+ G NFGCGSSRE AP+AL AG VVA S+ RIFFRNS+ G PL EA +
Sbjct: 52 DIIVGGNNFGCGSSREQAPLALKHAGVGCVVARSFGRIFFRNSINVG--LPL-IEADV-- 106
Query: 192 ECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARKTGMIAS 246
EC GD V + ++E + G+ Y + I D L ++ GG+ + +K + S
Sbjct: 107 ECEEGDEVEVNLSEGTV--KVAGRTYTGQQIPDFLLEILSDGGLVEHRKKQQRLNS 160
>gi|255657896|ref|ZP_05403305.1| 3-isopropylmalate dehydratase, small subunit [Mitsuokella multacida
DSM 20544]
gi|260850087|gb|EEX70094.1| 3-isopropylmalate dehydratase, small subunit [Mitsuokella multacida
DSM 20544]
Length = 163
Score = 96.7 bits (239), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 59/171 (34%), Positives = 92/171 (53%), Gaps = 15/171 (8%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
G + GDN+DTD IIPA YL N + ++L + ++ + ++ + E +
Sbjct: 3 LEGKVWRYGDNVDTDVIIPARYL-----NTFDPKELAKHCMVDIDESFAPN-VKEGD--- 53
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
I++ G NFGCGSSREHAPVA+ A+G V+A S+ARIF+RN + G PL
Sbjct: 54 ---IMVGGRNFGCGSSREHAPVAIKASGIPVVIAASFARIFYRNGINIG--LPLLEIGSD 108
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPI-GDLGPVIDAGGIFAYAR 239
E+ GD + ++ A + + TTG + P+ G + + AGG+ Y +
Sbjct: 109 VEKIKAGDKLRVDTATGTIEDLTTGDVFHAHPLPGFVQDIAKAGGLINYIK 159
>gi|288559362|ref|YP_003422848.1| 3-isopropylmalate dehydratase small subunit LeuD
[Methanobrevibacter ruminantium M1]
gi|288542072|gb|ADC45956.1| 3-isopropylmalate dehydratase small subunit LeuD
[Methanobrevibacter ruminantium M1]
Length = 160
Score = 96.7 bits (239), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 92/173 (53%), Gaps = 16/173 (9%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
G + G++IDTD I+P YL DE EKL + + GL + + +
Sbjct: 1 MKGKVWKFGNDIDTDIILPGRYLIYT----DE-EKLSEHCMEGLDPDFKNKV-------S 48
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
I+ G NFGCGSSREHAP+A+ G SAV+AES+ARIF+RN+ G PL +
Sbjct: 49 AGDFILGGTNFGCGSSREHAPIAIKGCGISAVIAESFARIFYRNATNVG--VPLLEAPGI 106
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARKT 241
G+ + +++ E +I +GKEY+ K + + +++ GG+ Y +K
Sbjct: 107 SSAIENGEEIEVDM-EKGIIISESGKEYEFKKLPPFMLEILEEGGLINYLKKQ 158
>gi|323486599|ref|ZP_08091920.1| hypothetical protein HMPREF9474_03671 [Clostridium symbiosum
WAL-14163]
gi|323692258|ref|ZP_08106499.1| 3-isopropylmalate dehydratase [Clostridium symbiosum WAL-14673]
gi|355630432|ref|ZP_09050844.1| 3-isopropylmalate dehydratase small subunit [Clostridium sp.
7_3_54FAA]
gi|323399980|gb|EGA92357.1| hypothetical protein HMPREF9474_03671 [Clostridium symbiosum
WAL-14163]
gi|323503673|gb|EGB19494.1| 3-isopropylmalate dehydratase [Clostridium symbiosum WAL-14673]
gi|354818650|gb|EHF03118.1| 3-isopropylmalate dehydratase small subunit [Clostridium sp.
7_3_54FAA]
Length = 161
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 90/170 (52%), Gaps = 15/170 (8%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + GDN+DTD IIPA YL N + ++L + + + + T+ D +
Sbjct: 5 GHVFKYGDNVDTDVIIPARYL-----NATDGKELAKHCMEDIDKEFITKVKDGD------ 53
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
II+A NFGCGSSREHAP+A+ AG S V+AE++ARIF+RN++ G P+
Sbjct: 54 -IIVANKNFGCGSSREHAPLAIKCAGVSCVIAETFARIFYRNAINIG--LPIIECPEAAM 110
Query: 192 ECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
GD V ++ ++N T Y+ + + + +I AGG+ Y +
Sbjct: 111 AIGNGDEVEVDFDSGIIVNKTKNTSYQGQAFPEFMQKIITAGGLVNYINQ 160
>gi|150401082|ref|YP_001324848.1| 3-isopropylmalate dehydratase small subunit [Methanococcus aeolicus
Nankai-3]
gi|150013785|gb|ABR56236.1| 3-isopropylmalate dehydratase, small subunit [Methanococcus
aeolicus Nankai-3]
Length = 165
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 62/172 (36%), Positives = 93/172 (54%), Gaps = 16/172 (9%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
G ++ GD+IDTD IIP YL ++P E L S+ + G+ ++T+ D +
Sbjct: 3 IKGNIHLFGDDIDTDAIIPGAYLK--TTDPKE---LASHCMAGIDEKFSTKVKDGD---- 53
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEA-- 187
II+AG NFGCGSSRE AP+++ G AVVAES+ARIF+RN + G I P+ E
Sbjct: 54 ---IIVAGENFGCGSSREQAPISIKHTGIKAVVAESFARIFYRNCINIGLI-PITCEGIN 109
Query: 188 RLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLGPVIDAGGIFAYAR 239
+ GD + I++ ++ I + P G ++DAGG+ Y +
Sbjct: 110 EQIQNLKDGDTIEIDL-QNETIKINSMMLNCGAPKGIEKEILDAGGLVQYTK 160
>gi|84489188|ref|YP_447420.1| 3-isopropylmalate dehydratase small subunit [Methanosphaera
stadtmanae DSM 3091]
gi|84372507|gb|ABC56777.1| LeuD2 [Methanosphaera stadtmanae DSM 3091]
Length = 163
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 92/167 (55%), Gaps = 18/167 (10%)
Query: 69 TFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETK 128
+ G + D IDTD II YL NP E L ++ + ++++
Sbjct: 3 SMKGKVWTFRDCIDTDVIIAGRYLRTF--NP---EDLAAHVMEAEDPEFSSKV------- 50
Query: 129 TKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEAR 188
K II+ G NFGCGSSRE APVA+ AG SAV+A+S+ARIF+RN++ G P+ +
Sbjct: 51 GKGDIIVGGWNFGCGSSREQAPVAIKTAGVSAVIAKSFARIFYRNAINIG--LPVITADI 108
Query: 189 LCEECSTGDVVTIEIAESRLINHTTGKEYKLKPI-GDLGPVIDAGGI 234
E GD++ + I + +IN TT K +K+KP ++ +++ GG+
Sbjct: 109 ---EVDEGDILEVNIEDGIIINETTKKTFKIKPFDAEMLDILENGGL 152
>gi|303326540|ref|ZP_07356983.1| 3-isopropylmalate dehydratase, small subunit [Desulfovibrio sp.
3_1_syn3]
gi|345893793|ref|ZP_08844585.1| 3-isopropylmalate dehydratase small subunit [Desulfovibrio sp.
6_1_46AFAA]
gi|302864456|gb|EFL87387.1| 3-isopropylmalate dehydratase, small subunit [Desulfovibrio sp.
3_1_syn3]
gi|345045829|gb|EGW49728.1| 3-isopropylmalate dehydratase small subunit [Desulfovibrio sp.
6_1_46AFAA]
Length = 165
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 90/173 (52%), Gaps = 15/173 (8%)
Query: 69 TFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETK 128
+ G + VG++IDTD IIPA +L + +KLG + GL + R
Sbjct: 2 NYKGKAHKVGEHIDTDAIIPARFLVTT-----DAKKLGENCMSGLEPDWVKRV------- 49
Query: 129 TKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEAR 188
I++AG NFGCGSSREHAP+A+ AG V+ S+ARIF+RN+ G + L
Sbjct: 50 APGDILVAGRNFGCGSSREHAPIAILGAGMPVVIGHSFARIFYRNAFNMGLL--LMEVGD 107
Query: 189 LCEECSTGDVVTIEIAESRLINHTTGKEYKLKPI-GDLGPVIDAGGIFAYARK 240
++ + GD + I+ A R+ + + G E P+ + ++ GG+ Y ++
Sbjct: 108 EVDKINDGDALEIDAATGRIRDLSNGAEITCPPLPQSMAAILSKGGLVGYVKE 160
>gi|396080185|dbj|BAM33561.1| 3-isopropylmalate dehydratase small subunit [Helicobacter cinaedi
ATCC BAA-847]
Length = 163
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 89/172 (51%), Gaps = 15/172 (8%)
Query: 71 HGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTK 130
G + GDN+DTD IIPA YL N ++ +L S+ + + + +
Sbjct: 4 QGFIHKYGDNVDTDVIIPARYL-----NTADHRELASHCMEDIDKDFVKKV-------KV 51
Query: 131 YKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLC 190
I++ G NFGCGSSREHAP+A+ A+G S ++A+S+ARIF+RN++ G + +
Sbjct: 52 CDIMVGGWNFGCGSSREHAPIAIKASGISCIIAKSFARIFYRNAINIG--LAIIESQEIA 109
Query: 191 EECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARKT 241
+ GD V+I+ + +I + K + P + +I+A G + K
Sbjct: 110 DFLQEGDSVSIDFDKGEIIESKSQKSFSTTPFPPFIQEIINANGYLNWIAKN 161
>gi|313143553|ref|ZP_07805746.1| 3-isopropylmalate dehydratase small subunit [Helicobacter cinaedi
CCUG 18818]
gi|313128584|gb|EFR46201.1| 3-isopropylmalate dehydratase small subunit [Helicobacter cinaedi
CCUG 18818]
Length = 177
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 89/172 (51%), Gaps = 15/172 (8%)
Query: 71 HGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTK 130
G + GDN+DTD IIPA YL N ++ +L S+ + + + +
Sbjct: 18 QGFIHKYGDNVDTDVIIPARYL-----NTADHRELASHCMEDIDKDFVKKV-------KV 65
Query: 131 YKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLC 190
I++ G NFGCGSSREHAP+A+ A+G S ++A+S+ARIF+RN++ G + +
Sbjct: 66 CDIMVGGWNFGCGSSREHAPIAIKASGISCIIAKSFARIFYRNAINIG--LAIIESQEIA 123
Query: 191 EECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARKT 241
+ GD V+I+ + +I + K + P + +I+A G + K
Sbjct: 124 DFLQEGDSVSIDFDKGEIIESKSQKSFSTTPFPPFIQEIINANGYLNWIAKN 175
>gi|295093380|emb|CBK82471.1| 3-isopropylmalate dehydratase, small subunit [Coprococcus sp.
ART55/1]
Length = 163
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 59/150 (39%), Positives = 81/150 (54%), Gaps = 18/150 (12%)
Query: 71 HGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTK 130
HG + GDN+DTD IIPA YL S+P E A ID++ K+
Sbjct: 4 HGTVHKYGDNVDTDVIIPARYLN--SSDPAEL------------AKSCMEDIDKDFVKSV 49
Query: 131 Y--KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEAR 188
I++A NFGCGSSREHAP+A+ A+G S V+AE++ARIF+RN++ G P+
Sbjct: 50 KPGDIMVARKNFGCGSSREHAPIAIKASGISCVIAETFARIFYRNAINIG--LPIIECPE 107
Query: 189 LCEECSTGDVVTIEIAESRLINHTTGKEYK 218
E GD V I+ + + T G E+K
Sbjct: 108 AAEAIQAGDDVEIDFDSGMIYDRTQGTEFK 137
>gi|410728027|ref|ZP_11366220.1| 3-isopropylmalate dehydratase, small subunit [Clostridium sp.
Maddingley MBC34-26]
gi|410597587|gb|EKQ52198.1| 3-isopropylmalate dehydratase, small subunit [Clostridium sp.
Maddingley MBC34-26]
Length = 161
Score = 96.3 bits (238), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 91/172 (52%), Gaps = 15/172 (8%)
Query: 69 TFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETK 128
+ G + GDN+DTD IIPA YL N + ++L ++ + + + D +
Sbjct: 2 SVKGKVFKYGDNVDTDVIIPARYL-----NTSDAKELAAHCMEDIDVDFVKNVKDGD--- 53
Query: 129 TKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEAR 188
II+A NFGCGSSREHAP+A+ AG S V+A ++ARIF+RN++ G P+
Sbjct: 54 ----IIVANKNFGCGSSREHAPLAIKTAGVSCVIASTFARIFYRNAINIG--LPILECDE 107
Query: 189 LCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYAR 239
+ GD + ++ + + N T +EY+ + + + +ID G+ Y R
Sbjct: 108 AVKNIDAGDELEVDFSTGLIKNLTKNQEYQGEAFPEFMQKIIDNDGLIGYIR 159
>gi|374340915|ref|YP_005097651.1| 3-isopropylmalate dehydratase small subunit [Marinitoga piezophila
KA3]
gi|372102449|gb|AEX86353.1| 3-isopropylmalate dehydratase, small subunit [Marinitoga piezophila
KA3]
Length = 166
Score = 96.3 bits (238), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 90/174 (51%), Gaps = 15/174 (8%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
F G + GDNI TD I P Y L + P+ L + L + ++
Sbjct: 3 FKGKVWKFGDNISTDHIAPGRYFHLRSNLPE----LAKHVLEDAREDFA-------KSVE 51
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
K III G NFG GSSREHAP + AG S V+A+S+ARIF+RNS+ G P+ E +
Sbjct: 52 KGDIIIGGNNFGLGSSREHAPRIIKVAGVSCVIAKSFARIFYRNSINIG--LPV-IELKE 108
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARKTG 242
+E + GD++ ++ + N T K+Y P + + +++ GGI Y +K G
Sbjct: 109 VDEFNEGDIIKVDTKLGVIENITQDKKYHFIPFPEFVNKILEIGGIDEYIKKYG 162
>gi|168335046|ref|ZP_02693159.1| 3-isopropylmalate dehydratase, small subunit [Epulopiscium sp.
'N.t. morphotype B']
Length = 158
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 94/168 (55%), Gaps = 15/168 (8%)
Query: 73 LCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYK 132
+ + GDN+DTD IIPA YL S+P+E +K Y ++ + T+ +E
Sbjct: 1 MIFKYGDNVDTDVIIPARYLA--TSDPNELKK---YCMLDIDETF-------HEKVQVGD 48
Query: 133 IIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEE 192
II+AG NFGCGSSREHAP+A+ A+G V A+S+ARIF+RN++ G + L+ E ++
Sbjct: 49 IIVAGKNFGCGSSREHAPLAIKASGIKCVXAKSFARIFYRNAINIG-LAILECE-EAADK 106
Query: 193 CSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYAR 239
D + I+ A + N T + YK + + ++ A G+ Y +
Sbjct: 107 IDLNDEIAIDFATGEIKNLTKNEIYKAGAFPEFMQKIMAADGLVGYVK 154
>gi|288560945|ref|YP_003424431.1| homoaconitase small subunit AksE [Methanobrevibacter ruminantium
M1]
gi|288543655|gb|ADC47539.1| homoaconitase small subunit AksE [Methanobrevibacter ruminantium
M1]
Length = 161
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 93/176 (52%), Gaps = 20/176 (11%)
Query: 68 ATFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENET 127
A G + GDNIDTD IIP YL NP++ L + L G +T
Sbjct: 2 AEIKGKVWNFGDNIDTDVIIPGRYLRTF--NPND---LALHVLEGERPDFTKNV------ 50
Query: 128 KTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG-EIYPLDSE 186
K +I+AG NFGCGSSRE APVA+ AAG ++A+S+ARIF+RN++ G + D E
Sbjct: 51 -EKGDVILAGENFGCGSSREQAPVAIKAAGVDVIIAKSFARIFYRNAINIGLPVVVADIE 109
Query: 187 ARLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARKT 241
A GD+V++++ +IN T + + + + + ++ GG+ + KT
Sbjct: 110 A------DDGDIVSVDLENGIIINETKDTKVEFQAFKEFMVNILSDGGLVKHYLKT 159
>gi|150390722|ref|YP_001320771.1| 3-isopropylmalate dehydratase small subunit [Alkaliphilus
metalliredigens QYMF]
gi|149950584|gb|ABR49112.1| 3-isopropylmalate dehydratase, small subunit [Alkaliphilus
metalliredigens QYMF]
Length = 167
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/171 (38%), Positives = 89/171 (52%), Gaps = 23/171 (13%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G VVG NIDTDQI P YL LV N + +A+ G+ + RF
Sbjct: 7 GKAIVVGKNIDTDQIYPGRYLELVDPN-----DIAKHAMEGVDPNFYKRF-------NPG 54
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
II+A NFGCGSSREHA + L AG +AV+A S+ARIF+RN++ G PL + A + E
Sbjct: 55 DIIVADKNFGCGSSREHAVITLKTAGVAAVIAPSFARIFYRNAINLG--LPLITCANITE 112
Query: 192 ECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLGP-----VIDAGGIFAY 237
G+ + + ++ + N+T E + GD P +I GGI Y
Sbjct: 113 FVKEGEELEVTLSTGTIKNNTVTTEIQ----GDELPPFVLEMISYGGIKQY 159
>gi|448419107|ref|ZP_21580198.1| 3-isopropylmalate dehydratase small subunit [Halosarcina pallida
JCM 14848]
gi|445675420|gb|ELZ27950.1| 3-isopropylmalate dehydratase small subunit [Halosarcina pallida
JCM 14848]
Length = 170
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/169 (37%), Positives = 100/169 (59%), Gaps = 16/169 (9%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G +V GD+IDTDQI P+ ++ V S+PDE L ++A L ++ E
Sbjct: 8 GRAWVFGDDIDTDQITPSRFI--VSSDPDE---LATHAFEDLRPEFS-------ENVDSG 55
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
++AG NFG GSSREH+P++L AG + VVA+S+ARIFFRN++ G + EA + +
Sbjct: 56 DFVVAGENFGSGSSREHSPLSLVGAGVAGVVAQSFARIFFRNAINLGLPVLICPEAGIID 115
Query: 192 ECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYAR 239
+ GD + + + E + NHTTG+ Y + + + L +++ GG+ AY +
Sbjct: 116 D---GDEICMNLGEGVVYNHTTGETYNAEALPEFLQTLVEQGGLKAYTK 161
>gi|240146708|ref|ZP_04745309.1| 3-isopropylmalate dehydratase, small subunit [Roseburia
intestinalis L1-82]
gi|257201139|gb|EEU99423.1| 3-isopropylmalate dehydratase, small subunit [Roseburia
intestinalis L1-82]
Length = 162
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 90/174 (51%), Gaps = 23/174 (13%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + GDN+DTD IIPA YL S+P E A + ID++ K
Sbjct: 6 GHVFKYGDNVDTDVIIPARYLN--SSDPKEL------------ALHCMEDIDKDFVKNVK 51
Query: 132 --KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
I++A NFGCGSSREHAP+A+ AAG S V+AE++ARIF+RNS+ G P+ +
Sbjct: 52 AGDIMVANKNFGCGSSREHAPIAIKAAGVSCVIAETFARIFYRNSINIG--LPIIECPQA 109
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYK---LKPIGDLGPVIDAGGIFAYARK 240
+E GD V ++ + + T G Y+ P + +ID G+ Y +
Sbjct: 110 AKEIEAGDEVEVDFDTGVITDVTKGTSYQGQAFPPF--MQKIIDCEGLVNYINQ 161
>gi|359410168|ref|ZP_09202633.1| 3-isopropylmalate dehydratase small subunit [Clostridium sp.
DL-VIII]
gi|357169052|gb|EHI97226.1| 3-isopropylmalate dehydratase small subunit [Clostridium sp.
DL-VIII]
Length = 161
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 90/169 (53%), Gaps = 15/169 (8%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + GDN+DTD IIPA YL N + ++L ++ + + + D +
Sbjct: 5 GKVFKYGDNVDTDVIIPARYL-----NTSDAKELAAHCMEDIDVDFVKNVKDGD------ 53
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
II+A NFGCGSSREHAP+A+ AG S V+A ++ARIF+RN++ G P+ +
Sbjct: 54 -IIVANKNFGCGSSREHAPLAIKTAGVSCVIASTFARIFYRNAINIG--LPILECDEAVK 110
Query: 192 ECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYAR 239
GD + ++ + + N T +EY+ + + + +ID G+ Y R
Sbjct: 111 SIDAGDELEVDFSTGLIKNLTKNQEYQGEAFPEFMQKIIDNDGLIGYIR 159
>gi|266624450|ref|ZP_06117385.1| 3-isopropylmalate dehydratase, small subunit, partial [Clostridium
hathewayi DSM 13479]
gi|288863698|gb|EFC95996.1| 3-isopropylmalate dehydratase, small subunit [Clostridium hathewayi
DSM 13479]
Length = 153
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/167 (38%), Positives = 88/167 (52%), Gaps = 23/167 (13%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT-- 129
G + GDN+DTD IIPA YL + D YE A + ID++ K
Sbjct: 5 GSVFKYGDNVDTDVIIPARYLNIT----DGYEL----------ARHCMEDIDKDFVKNVK 50
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
K II+A NFGCGSSREHAP+ + AG S V+AE++ARIF+RN++ G P+
Sbjct: 51 KGDIIVANKNFGCGSSREHAPLVIKCAGISCVIAETFARIFYRNAINIG--LPIIECPEA 108
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYK---LKPIGDLGPVIDAGG 233
+ S GD V ++ + N TTG+ Y+ P + +I AGG
Sbjct: 109 AKAISAGDEVEVDFDSGIITNKTTGESYEGQAFPPF--MQKIISAGG 153
>gi|384209550|ref|YP_005595270.1| 3-isopropylmalate dehydratase [Brachyspira intermedia PWS/A]
gi|343387200|gb|AEM22690.1| 3-isopropylmalate dehydratase [Brachyspira intermedia PWS/A]
Length = 167
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 93/166 (56%), Gaps = 17/166 (10%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + GDN+DTD IIPA YL N +++L ++ + + + ++ KT
Sbjct: 9 GFVHKYGDNVDTDVIIPARYL-----NTANHKELAAHCMEDIDKDFVSK------VKTG- 56
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG-EIYPLDSEARLC 190
I++ G NFGCGSSREHAP+A+ +G S V+A S+ARIF+RNS+ G I D ++
Sbjct: 57 DIMVGGDNFGCGSSREHAPIAIKESGISCVIASSFARIFYRNSINIGLAILECDEASK-- 114
Query: 191 EECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIF 235
+ + GD V ++ + N T + YK +P + + +I++ G+
Sbjct: 115 -KINAGDEVEVDFDNGIIKNITKNESYKAEPFPEFIKNIINSNGLL 159
>gi|225378197|ref|ZP_03755418.1| hypothetical protein ROSEINA2194_03857 [Roseburia inulinivorans DSM
16841]
gi|225210003|gb|EEG92357.1| hypothetical protein ROSEINA2194_03857 [Roseburia inulinivorans DSM
16841]
Length = 162
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 90/174 (51%), Gaps = 23/174 (13%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT-- 129
G + GDN+DTD IIPA YL S+P E AT+ ID++ K
Sbjct: 6 GHVFKYGDNVDTDVIIPARYLN--SSDPKEL------------ATHCMEDIDKDFVKNVK 51
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
+ II+A NFGCGSSREHAP+++ AAG S V+AE++ARIF+RN++ G P+
Sbjct: 52 EGDIIVANKNFGCGSSREHAPISIKAAGVSCVIAETFARIFYRNAINIG--LPIIECPDA 109
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYK---LKPIGDLGPVIDAGGIFAYARK 240
+E GD V + + + T G Y+ P + +ID G+ Y +
Sbjct: 110 AKEIEAGDEVEVNFDTGVITDKTKGTSYQGQAFPPF--MQKIIDCEGLVNYINQ 161
>gi|257076378|ref|ZP_05570739.1| 3-isopropylmalate dehydratase small subunit [Ferroplasma
acidarmanus fer1]
Length = 160
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/168 (38%), Positives = 95/168 (56%), Gaps = 18/168 (10%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G V+GDN+DTDQIIPA+YL N E +KL P + D K
Sbjct: 7 GRAIVLGDNVDTDQIIPAKYL-----NTSEPDKLA-------PHFMENEYPDLAANIMKG 54
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
II+AG NFG GSSREHA + + G S ++AES+ARIFFRN++ TG P+ EA++ E
Sbjct: 55 DIIVAGKNFGSGSSREHAVITIKGLGISCIIAESFARIFFRNAINTG--IPV-IEAKI-E 110
Query: 192 ECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLGPVIDAGGIFAYAR 239
G+ ++I+ +S ++++ ++K P L +ID+ G+ Y R
Sbjct: 111 ATEYGE-ISIDFDKSIIMHNGITTQFKKYP-EFLRNIIDSKGLVNYVR 156
>gi|288932471|ref|YP_003436531.1| 3-isopropylmalate dehydratase, small subunit [Ferroglobus placidus
DSM 10642]
gi|288894719|gb|ADC66256.1| 3-isopropylmalate dehydratase, small subunit [Ferroglobus placidus
DSM 10642]
Length = 161
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/174 (38%), Positives = 92/174 (52%), Gaps = 27/174 (15%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + GDN+DTD II +YL + ++P E L + + + E K K
Sbjct: 2 GRAWKFGDNVDTDVIIQGKYLVI--NDPKE---LAKHVFENVRPEFAK------EVK-KG 49
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
++AG NFGCGSSREHAP+AL A G AV+A+S+ARIFFRNSV G R+
Sbjct: 50 DFVVAGENFGCGSSREHAPLALKATGIEAVIAKSFARIFFRNSVNIG--------LRVI- 100
Query: 192 ECST-----GDVVTIEIAESRLINHTTGKEYKL-KPIGDLGPVIDAGGIFAYAR 239
EC T GD + I+ + +IN T G E KP + ++ GG+ +AR
Sbjct: 101 ECDTSKIDDGDELEIDYEKGVIINKTKGIEIPFKKPPEFVEEIMRRGGLVNFAR 154
>gi|284162402|ref|YP_003401025.1| 3-isopropylmalate dehydratase small subunit [Archaeoglobus
profundus DSM 5631]
gi|284012399|gb|ADB58352.1| 3-isopropylmalate dehydratase, small subunit [Archaeoglobus
profundus DSM 5631]
Length = 162
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 95/176 (53%), Gaps = 18/176 (10%)
Query: 69 TFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETK 128
G + GDNI TD I P Y L + E+L + + + +F +
Sbjct: 1 MLRGRAWKFGDNISTDHITPGRYFHL----RSKIEELAKHVMEDADPDFMKKFKPGD--- 53
Query: 129 TKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG-EIYPLDSEA 187
++AG NFG GSSREHAP+AL AG SAV+A+S+ARIF+RN++ G + +D++
Sbjct: 54 ----FVVAGKNFGMGSSREHAPLALKVAGVSAVLAKSFARIFYRNAINVGLPVLIVDTDP 109
Query: 188 RLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARKTG 242
+GD++ +++++ + + T G E K KP+ + + ++ AGG+ Y + G
Sbjct: 110 -----IESGDILEVDLSKGIVRDVTKGIELKAKPLPEFMLRILKAGGLVEYVKTYG 160
>gi|119873298|ref|YP_931305.1| 3-isopropylmalate dehydratase small subunit [Pyrobaculum islandicum
DSM 4184]
gi|171704664|sp|A1RVI0.1|LEUD_PYRIL RecName: Full=3-isopropylmalate dehydratase small subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|119674706|gb|ABL88962.1| 3-isopropylmalate dehydratase, small subunit [Pyrobaculum
islandicum DSM 4184]
Length = 161
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/172 (38%), Positives = 91/172 (52%), Gaps = 18/172 (10%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFID-ENETK 128
G V GD IDTD IIPA+YL N LG +A+ ID E K
Sbjct: 3 IRGRAIVYGDKIDTDVIIPAKYLVYTDPN-----ILGQHAM---------EPIDPEFPKK 48
Query: 129 TKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEAR 188
K I++AG FG GSSRE A +AL AG AVVAES+ARIFFRN++ G P+
Sbjct: 49 AKGAILVAGRAFGMGSSREQAAIALKGAGVLAVVAESFARIFFRNAINIG--LPVLQVPE 106
Query: 189 LCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLG-PVIDAGGIFAYAR 239
+ ++ G+ + ++I IN TG++ + KPI L ++ AGG+ Y +
Sbjct: 107 ITKKVKEGEELEVDIENGYCINLATGEKIEGKPIRGLPLAILKAGGLTNYLK 158
>gi|150391194|ref|YP_001321243.1| 3-isopropylmalate dehydratase small subunit [Alkaliphilus
metalliredigens QYMF]
gi|149951056|gb|ABR49584.1| 3-isopropylmalate dehydratase, small subunit [Alkaliphilus
metalliredigens QYMF]
Length = 171
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 95/171 (55%), Gaps = 15/171 (8%)
Query: 71 HGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTK 130
+G + G N+DTD IIPA YL+ +P E L + + L +T++++ +
Sbjct: 5 NGRVFKYGSNVDTDVIIPARYLSTF--DPGE---LAKHCMEDLDSTFSSQVKSGD----- 54
Query: 131 YKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLC 190
II+ NFGCGSSREHAP+A+ A+G S V+A S+ARIF+RN++ G P+
Sbjct: 55 --IIVGEKNFGCGSSREHAPLAIKASGISCVIASSFARIFYRNAINIG--LPILECPEAV 110
Query: 191 EECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
E+ GDV+ I + + N T + Y+ +P + + ++++ G+ Y K
Sbjct: 111 EKIENGDVIEINFKKGIIHNMTKTEFYEAQPFPEFIQKIMESDGLIKYIAK 161
>gi|440780720|ref|ZP_20959191.1| 3-isopropylmalate dehydratase small subunit [Clostridium
pasteurianum DSM 525]
gi|440221308|gb|ELP60513.1| 3-isopropylmalate dehydratase small subunit [Clostridium
pasteurianum DSM 525]
Length = 164
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/141 (39%), Positives = 77/141 (54%), Gaps = 14/141 (9%)
Query: 78 GDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKIIIAG 137
GDN+DTD IIPA YL S+P + L + + L + + I++A
Sbjct: 11 GDNVDTDVIIPARYLN--SSDPKD---LAKHCMEDLDVNFLEKL-------NPGDIVVAD 58
Query: 138 GNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEECSTGD 197
NFGCGSSREHAP+AL AAG S V+A+S+ARIF+RNS+ G +P+ +
Sbjct: 59 KNFGCGSSREHAPIALKAAGVSCVIAKSFARIFYRNSINIG--FPILECEEAVNDAKNNH 116
Query: 198 VVTIEIAESRLINHTTGKEYK 218
+ ++ + N T GKEYK
Sbjct: 117 ELEVDFTTGIIKNITLGKEYK 137
>gi|148643359|ref|YP_001273872.1| 3-isopropylmalate dehydratase small subunit [Methanobrevibacter
smithii ATCC 35061]
gi|148552376|gb|ABQ87504.1| 3-isopropylmalate dehydratase, small subunit, LeuD
[Methanobrevibacter smithii ATCC 35061]
Length = 160
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/173 (35%), Positives = 91/173 (52%), Gaps = 18/173 (10%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
G + GD+IDTD I+P YL DE E+L + + GL + NE
Sbjct: 1 MKGTVWKFGDDIDTDIILPGRYLIYT----DE-ERLSQHCMEGLDDKF-------NEKCK 48
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
K I+AG NFGCGSSREHAP+AL G +AV+AES+ARIF+RN+ G PL +
Sbjct: 49 KGDFIVAGKNFGCGSSREHAPIALKGVGVAAVIAESFARIFYRNATNVG--VPLLEAPGI 106
Query: 190 CEECSTGDVVTIEIAESRLI--NHTTGKEYKLKPIGDLGPVIDAGGIFAYARK 240
+ G+ + +++ + + N T KL P + +++ GG+ Y ++
Sbjct: 107 SKLVENGEEIEVDMDKGTITSENGETITFKKLPPF--MLEILEKGGLIEYLKQ 157
>gi|313114233|ref|ZP_07799781.1| 3-isopropylmalate dehydratase, small subunit [Faecalibacterium cf.
prausnitzii KLE1255]
gi|310623427|gb|EFQ06834.1| 3-isopropylmalate dehydratase, small subunit [Faecalibacterium cf.
prausnitzii KLE1255]
Length = 163
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 87/158 (55%), Gaps = 15/158 (9%)
Query: 79 DNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKIIIAGG 138
DN+DTD IIPA +L N + ++L S+ + + + + D + I++ G
Sbjct: 12 DNVDTDVIIPARHL-----NTQDAKELASHCMEDIDKDFVKKVKDGD-------IMVGGW 59
Query: 139 NFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEECSTGDV 198
NFGCGSSREHAP+ + AG S V+A+S+ARIF+RNS+ G P+ + + GD
Sbjct: 60 NFGCGSSREHAPLCIKTAGISVVIAKSFARIFYRNSINIG--LPIMECPEAVDAINAGDT 117
Query: 199 VTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIF 235
V+++ + + T GK + +P + +I AGG+
Sbjct: 118 VSVDFDTGVITDETNGKVFHAEPFPPFIQEIISAGGLM 155
>gi|333911436|ref|YP_004485169.1| 3-isopropylmalate dehydratase small subunit [Methanotorris igneus
Kol 5]
gi|333752025|gb|AEF97104.1| 3-isopropylmalate dehydratase small subunit [Methanotorris igneus
Kol 5]
Length = 169
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/171 (34%), Positives = 94/171 (54%), Gaps = 14/171 (8%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
G +V GD++DTD IIP YL D YE L S+ + G+ + + + +
Sbjct: 3 IRGRAHVFGDDVDTDAIIPGPYL----RTTDVYE-LASHCMAGIDEDFPKKVKEGD---- 53
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
+I+AG NFGCGSSRE AP+A+ G AV+AES+ARIF+RN++ G I P+ + +
Sbjct: 54 ---VIVAGENFGCGSSREQAPIAIKYCGIKAVIAESFARIFYRNAINIGLI-PIVCKG-I 108
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLGPVIDAGGIFAYARK 240
+ GDV+ +++ ++I + P G +++AGG+ Y +K
Sbjct: 109 TKHVKDGDVIEVDLENEKIIINDKITLNCETPKGIEREILEAGGLTNYIKK 159
>gi|319788715|ref|YP_004090030.1| 3-isopropylmalate dehydratase, small subunit [Ruminococcus albus 7]
gi|315450582|gb|ADU24144.1| 3-isopropylmalate dehydratase, small subunit [Ruminococcus albus 7]
Length = 159
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 89/165 (53%), Gaps = 15/165 (9%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + GDN+DTD IIPA YL N E+L + + + ID + K
Sbjct: 5 GKVHKYGDNVDTDVIIPARYL-----NTSNMEELAQHCMEDID-------IDFAKNVKKG 52
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
I++A NFGCGSSREHAP ++ A+G S V+A+S+ARIF+RN++ G P+ E
Sbjct: 53 DIMVAKANFGCGSSREHAPASIKASGISCVIAKSFARIFYRNAINIG--LPIIECEEASE 110
Query: 192 ECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIF 235
+ GD V I+ + N T G+ Y+ + + L +I++ G+
Sbjct: 111 KIEAGDEVEIDFDSGVITNKTKGETYQGQSFPEFLIKIINSNGLL 155
>gi|187250815|ref|YP_001875297.1| 3-isopropylmalate dehydratase small subunit [Elusimicrobium minutum
Pei191]
gi|186970975|gb|ACC97960.1| (re) Citrate synthase [Elusimicrobium minutum Pei191]
Length = 164
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 93/177 (52%), Gaps = 26/177 (14%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + GD+I TD I P L + P+ + + L + + + + +K
Sbjct: 3 GKAWKFGDDISTDHIAPGRLFHLRSNLPE----MAKHVLEDADSAFAS-------SMSKG 51
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
++AG NFG GSSREHAP + +G SAV+A+S+ARIFFRN++ G L
Sbjct: 52 DFVVAGKNFGLGSSREHAPTIIKLSGVSAVLAKSFARIFFRNAINIG---------LLLV 102
Query: 192 ECST-----GDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARKTG 242
EC T GD + +++ + + N T+GK+ K+ P+ D + ++ GG+ A+ +K G
Sbjct: 103 ECDTDQIKAGDEIELDVKQGVVKNLTSGKDIKITPMPDVMIKILQDGGLMAHIQKHG 159
>gi|310657730|ref|YP_003935451.1| 3-isopropylmalate dehydratase small subunit 1 (Isopropylmalate
isomerase 1) (Alpha-IPM isomerase 1) (IPMI 1)
[[Clostridium] sticklandii]
gi|308824508|emb|CBH20546.1| 3-isopropylmalate dehydratase small subunit 1 (Isopropylmalate
isomerase 1) (Alpha-IPM isomerase 1) (IPMI 1)
[[Clostridium] sticklandii]
Length = 169
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/148 (39%), Positives = 83/148 (56%), Gaps = 14/148 (9%)
Query: 71 HGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTK 130
G + GDNIDTD IIPA YL N E+L Y +I + + + N+ K
Sbjct: 4 RGRVFKYGDNIDTDVIIPARYL-----NVSSGEELAKYCMIDIDSDFV------NKIKAG 52
Query: 131 YKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLC 190
I++AG NFGCGSSREHAP+++ AG S ++AES+ARIF+RN++ G EA L
Sbjct: 53 -DIMVAGKNFGCGSSREHAPLSIKCAGISCIIAESFARIFYRNAINIGMPILESREASLN 111
Query: 191 EECSTGDVVTIEIAESRLINHTTGKEYK 218
E S D + ++ + + N T EY+
Sbjct: 112 IEDS--DEIEVDFSLGIIKNITKNCEYQ 137
>gi|386001088|ref|YP_005919387.1| 3-isopropylmalate dehydratase small subunit [Methanosaeta
harundinacea 6Ac]
gi|357209144|gb|AET63764.1| 3-isopropylmalate dehydratase small subunit 2 [Methanosaeta
harundinacea 6Ac]
Length = 164
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 85/171 (49%), Gaps = 16/171 (9%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + D++DTD IIP YL + ++ E L Y G+ +
Sbjct: 5 GRAWKFKDDVDTDAIIPGRYLVI-----NDPEGLARYVFEGVRPEFAG-------GAEPG 52
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
++AG NFGCGSSREHAP+ L AG AVVA S+ARIFFRN++ G + + E
Sbjct: 53 DFVVAGRNFGCGSSREHAPLGLKGAGVKAVVARSFARIFFRNAINIGLPLFISPD---VE 109
Query: 192 ECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARKT 241
GD + I+ + N + G+ Y P+ L +++AGG+ Y ++
Sbjct: 110 RIRDGDEIEIDADAGVIFNRSRGENYPTTPLPPFLQEIVEAGGLVEYTKRM 160
>gi|20094642|ref|NP_614489.1| 3-isopropylmalate dehydratase small subunit [Methanopyrus kandleri
AV19]
gi|23396650|sp|Q8TW31.1|LEUD2_METKA RecName: Full=3-isopropylmalate dehydratase small subunit 2;
AltName: Full=Alpha-IPM isomerase 2; Short=IPMI 2;
AltName: Full=Isopropylmalate isomerase 2
gi|19887797|gb|AAM02419.1| 3-isopropylmalate dehydratase small subunit [Methanopyrus kandleri
AV19]
Length = 168
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 85/151 (56%), Gaps = 15/151 (9%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
+ G +V GD++DTDQIIP L V Y++LG YA+ G + E
Sbjct: 3 WSGRAHVFGDDVDTDQIIPGRCLRRV-----SYDELGRYAMTGADPEFP-------EKVR 50
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
+ +I+AG NFGCGSSRE A +AL AG + VVA S+ARIF+RN++ G + +++E
Sbjct: 51 EGDVIVAGKNFGCGSSREQAVMALQQAGVACVVARSFARIFYRNAINRG-LPTVEAEEDP 109
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLK 220
E G+ VT+++ E L+ +E L+
Sbjct: 110 TEVVEDGNRVTVDLDE--LVLRAGSEEVPLR 138
>gi|283795690|ref|ZP_06344843.1| 3-isopropylmalate dehydratase, small subunit [Clostridium sp.
M62/1]
gi|291077366|gb|EFE14730.1| 3-isopropylmalate dehydratase, small subunit [Clostridium sp.
M62/1]
gi|295091363|emb|CBK77470.1| 3-isopropylmalate dehydratase, small subunit [Clostridium cf.
saccharolyticum K10]
gi|295116252|emb|CBL37099.1| 3-isopropylmalate dehydratase, small subunit [butyrate-producing
bacterium SM4/1]
Length = 161
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 89/172 (51%), Gaps = 19/172 (11%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + GDN+DTD IIPA YL N + E+L + + + + R K
Sbjct: 5 GHVFKYGDNVDTDVIIPARYL-----NATKGEELAKHCMEDIDKDFVNRV-------QKG 52
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
II+A NFGCGSSREHAP+A+ AG S V+AE++ARIF+RN++ G P+
Sbjct: 53 DIIVAEKNFGCGSSREHAPLAIKCAGISCVIAETFARIFYRNAINIG--LPIIECPEAAA 110
Query: 192 ECSTGDVVTIEIAESRLINHTTGKEYK---LKPIGDLGPVIDAGGIFAYARK 240
G V I+ + + TTG+ ++ P + +I+AGG+ Y +
Sbjct: 111 SIQAGHEVEIDFDSGVITDKTTGESFEGQAFPPF--MQKIIEAGGLVNYINQ 160
>gi|336121550|ref|YP_004576325.1| 3-isopropylmalate dehydratase small subunit [Methanothermococcus
okinawensis IH1]
gi|334856071|gb|AEH06547.1| 3-isopropylmalate dehydratase small subunit [Methanothermococcus
okinawensis IH1]
Length = 161
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 94/173 (54%), Gaps = 21/173 (12%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
G ++ GD++DTD IIP YL D YE L S+ + G IDEN K
Sbjct: 3 IKGNVHLFGDDVDTDAIIPGAYL----KTTDPYE-LASHCMAG---------IDENFPKK 48
Query: 130 --KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEA 187
+ II+AG NFGCGSSRE AP+++ G A+VAES+ARIF+RN + G I P+ +
Sbjct: 49 VKEGDIIVAGENFGCGSSREQAPISIKYTGIKAIVAESFARIFYRNCINIGLI-PITCKG 107
Query: 188 RLCEECSTGDVVTIEIAESRLINHTTGKEYKLK-PIGDLGPVIDAGGIFAYAR 239
+ +E GD + I++ ++ GK+ P G ++ AGG+ YA+
Sbjct: 108 -INKEIQNGDSIEIDLENKKIT--VNGKKLNCNVPKGIEWEILSAGGLVNYAK 157
>gi|408383127|ref|ZP_11180666.1| 3-isopropylmalate dehydratase small subunit [Methanobacterium
formicicum DSM 3637]
gi|407814235|gb|EKF84867.1| 3-isopropylmalate dehydratase small subunit [Methanobacterium
formicicum DSM 3637]
Length = 169
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/165 (38%), Positives = 88/165 (53%), Gaps = 21/165 (12%)
Query: 71 HGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTK 130
+G + D+IDTD IIP YL ++L S+ + G + + + K
Sbjct: 6 NGKVWKFRDSIDTDVIIPGRYLRTFS-----LDELASHVMEGENSEFA-------KNVEK 53
Query: 131 YKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG-EIYPLDSEARL 189
II+AG NFGCGSSRE APVAL AG A+VA S+ARIF+RN++ G + D EA
Sbjct: 54 GDIIVAGWNFGCGSSREQAPVALKHAGVDAIVARSFARIFYRNAINVGLPVIVADIEA-- 111
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD--LGPVIDAG 232
GD + I++ + + N TTGK ++P D LG + D G
Sbjct: 112 ----DEGDKLQIDLEKGIIQNLTTGKSCHIQPFHDFMLGILQDGG 152
>gi|222445601|ref|ZP_03608116.1| hypothetical protein METSMIALI_01241 [Methanobrevibacter smithii
DSM 2375]
gi|222435166|gb|EEE42331.1| isopropylmalate/citramalate isomerase small subunit
[Methanobrevibacter smithii DSM 2375]
Length = 160
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/173 (35%), Positives = 92/173 (53%), Gaps = 18/173 (10%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
+G + GD+IDTD I+P YL DE E+L + + GL + NE
Sbjct: 1 MNGTVWKFGDDIDTDIILPGRYLIYT----DE-ERLSQHCMEGLDPNF-------NEKCK 48
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
K I+AG NFGCGSSREHAP+AL G SAV+AES+ARIF+RN+ G PL +
Sbjct: 49 KGDFIVAGKNFGCGSSREHAPIALKGVGVSAVIAESFARIFYRNATNVG--VPLLEAPGI 106
Query: 190 CEECSTGDVVTIEIAESRLI--NHTTGKEYKLKPIGDLGPVIDAGGIFAYARK 240
+ + + +++ + + N T + KL P + +++ GG+ Y ++
Sbjct: 107 TKLVENEEKIEVDMDKGIITSKNGETIEFKKLPPF--MLEILEKGGLIEYLKQ 157
>gi|325959670|ref|YP_004291136.1| 3-isopropylmalate dehydratase small subunit [Methanobacterium sp.
AL-21]
gi|325331102|gb|ADZ10164.1| 3-isopropylmalate dehydratase small subunit [Methanobacterium sp.
AL-21]
Length = 163
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 94/173 (54%), Gaps = 18/173 (10%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
G + D+IDTD II YL + L S+ + + +DE +
Sbjct: 4 LEGKVWKFRDSIDTDVIIAGRYLRTFS-----LDDLASHVMEAEDPNFAEN-VDEGD--- 54
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
II+AG NFGCGSSRE APVAL AG SA++A+S+ARIF+RN++ G P+ +
Sbjct: 55 ---IIVAGWNFGCGSSREQAPVALKHAGVSAIIAKSFARIFYRNAINIG--LPVITADVT 109
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARKT 241
E+ GD + I++ + ++N +TG E+K++P + + ++ GG+ + K
Sbjct: 110 AEK---GDEICIDLEKGVILNKSTGSEFKIQPFDNFMLEILSDGGLVKHYLKV 159
>gi|333986905|ref|YP_004519512.1| 3-isopropylmalate dehydratase small subunit [Methanobacterium sp.
SWAN-1]
gi|333825049|gb|AEG17711.1| 3-isopropylmalate dehydratase small subunit [Methanobacterium sp.
SWAN-1]
Length = 167
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/172 (36%), Positives = 92/172 (53%), Gaps = 20/172 (11%)
Query: 71 HGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTK 130
G + D IDTD IIP YL + L S+ + G + + + E +
Sbjct: 9 EGKVWKFRDCIDTDVIIPGRYLRTFS-----LDDLASHVMAGEDPKFAEK-VQEGD---- 58
Query: 131 YKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG-EIYPLDSEARL 189
+I+AG NFGCGSSRE APVAL AG SA+VA+S+ARIF+RN++ G + D EA
Sbjct: 59 --LIVAGWNFGCGSSREQAPVALKHAGVSAIVAKSFARIFYRNAINVGLPVIIADVEA-- 114
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
DV+ I + E + N TTGK ++++P + +++ GG+ + K
Sbjct: 115 ----EKDDVLRISLEEGIIKNVTTGKTFQIRPFKKFMQGILEDGGLVKHYLK 162
>gi|404476134|ref|YP_006707565.1| 3-isopropylmalate dehydratase small subunit [Brachyspira pilosicoli
B2904]
gi|431807115|ref|YP_007234013.1| 3-isopropylmalate dehydratase small subunit [Brachyspira pilosicoli
P43/6/78]
gi|404437623|gb|AFR70817.1| 3-isopropylmalate dehydratase small subunit [Brachyspira pilosicoli
B2904]
gi|430780474|gb|AGA65758.1| 3-isopropylmalate dehydratase small subunit [Brachyspira pilosicoli
P43/6/78]
Length = 160
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 90/166 (54%), Gaps = 17/166 (10%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + GDN+DTD IIPA YL N +++L S+ + + + +
Sbjct: 5 GFVHKYGDNVDTDVIIPARYL-----NTANHKELASHCMEDIDKDFVGKV-------KAG 52
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG-EIYPLDSEARLC 190
I++ G NFGCGSSREHAP+A+ +G S V+A S+ARIF+RNS+ G I D ++
Sbjct: 53 DIMVGGENFGCGSSREHAPIAIKESGISCVIASSFARIFYRNSINIGLAILECDEASK-- 110
Query: 191 EECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIF 235
+ + GD V ++ + N T + YK +P + + +I++ G+
Sbjct: 111 -KINAGDEVEVDFDSGIITNITKNESYKAEPFPEFIKNIINSNGLL 155
>gi|225619972|ref|YP_002721229.1| 3-isopropylmalate dehydratase [Brachyspira hyodysenteriae WA1]
gi|259494353|sp|C0R087.1|LEUD_BRAHW RecName: Full=3-isopropylmalate dehydratase small subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|225214791|gb|ACN83525.1| 3-isopropylmalate dehydratase [Brachyspira hyodysenteriae WA1]
Length = 163
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 91/166 (54%), Gaps = 17/166 (10%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + GDN+DTD IIPA YL N +++L ++ + + + + KT
Sbjct: 5 GFVHKYGDNVDTDVIIPARYL-----NTANHKELAAHCMEDIDKDFVKK------VKTG- 52
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG-EIYPLDSEARLC 190
I++ G NFGCGSSREHAP+A+ +G S V+A S+ARIF+RNS+ G I D ++
Sbjct: 53 DIMVGGDNFGCGSSREHAPIAIKESGISCVIASSFARIFYRNSINIGLAILECDEASK-- 110
Query: 191 EECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIF 235
+ S D V ++ + N T + YK +P + + +I++ G+
Sbjct: 111 -KISDNDEVEVDFDNGLIKNITKNETYKAEPFPEFIKKIINSNGLL 155
>gi|121536003|ref|ZP_01667794.1| 3-isopropylmalate dehydratase, small subunit [Thermosinus
carboxydivorans Nor1]
gi|121305418|gb|EAX46369.1| 3-isopropylmalate dehydratase, small subunit [Thermosinus
carboxydivorans Nor1]
Length = 173
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 90/172 (52%), Gaps = 17/172 (9%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
G GDNI+TD I P +YL E + +A+ G+ +T + +
Sbjct: 4 LQGNVLKYGDNINTDLISPPQYLE------KSLEIIAQHAMEGIDEQFTKKIKPGD---- 53
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
I++AG NFG GSSRE AP+AL AG A+VA+ +ARIF+RN++ G P+ E +
Sbjct: 54 ---ILVAGANFGPGSSRETAPIALKMAGVGAIVAKFFARIFYRNAINIG--LPV-LECQE 107
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
+ GD + I + + N TTG+ YK P+ + + ++ AGG+ Y K
Sbjct: 108 VDRIRDGDTIAINLQTGEIANKTTGETYKATPLSEPVMEILSAGGLIPYLEK 159
>gi|18313017|ref|NP_559684.1| 3-isopropylmalate dehydratase small subunit [Pyrobaculum aerophilum
str. IM2]
gi|23396663|sp|Q8ZW36.1|LEUD_PYRAE RecName: Full=3-isopropylmalate dehydratase small subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|18160519|gb|AAL63866.1| 3-isopropylmalate dehydratase small subunit (leuD) [Pyrobaculum
aerophilum str. IM2]
Length = 161
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/173 (38%), Positives = 93/173 (53%), Gaps = 16/173 (9%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
G V GD IDTD IIPA+YL V ++P LG +A+ L + K
Sbjct: 3 IRGRALVYGDKIDTDVIIPAKYL--VYTDP---ALLGQHAMEPLDPEFPK--------KA 49
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
K +++AG FG GSSRE A +AL AG AVVAES+ARIFFRN++ G P+ +
Sbjct: 50 KGAVLVAGRAFGMGSSREQAALALKGAGVLAVVAESFARIFFRNAINVG--LPVLQAPGI 107
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLG-PVIDAGGIFAYARKT 241
E+ GD V +++ + N TTG+ KP+ L ++ AGG+ Y + +
Sbjct: 108 REKVKDGDEVELDVEGGIVRNITTGEVIVGKPLRGLPLEILKAGGLLNYLKNS 160
>gi|326791928|ref|YP_004309749.1| 3-isopropylmalate dehydratase small subunit [Clostridium
lentocellum DSM 5427]
gi|326542692|gb|ADZ84551.1| 3-isopropylmalate dehydratase, small subunit [Clostridium
lentocellum DSM 5427]
Length = 162
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 89/166 (53%), Gaps = 19/166 (11%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETK--T 129
G + GDN+DTD IIPA YL SN E A + ID N K
Sbjct: 5 GTVFRYGDNVDTDVIIPARYLN--TSNGKEL------------AAHCMEDIDVNFVKEVK 50
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
+ II+A NFGCGSSREHAP+A+ AG S V+A ++ARIF+RN++ G + L+ EA
Sbjct: 51 EGDIIVADKNFGCGSSREHAPLAIKEAGVSCVIARTFARIFYRNAINIG-LPILECEA-A 108
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPI-GDLGPVIDAGGI 234
+ S GDVV + + N T G+ Y+ +P + +I GG+
Sbjct: 109 ADGISKGDVVEVNFDTGVITNVTKGESYQGQPFPAFMQEIIQKGGL 154
>gi|289522456|ref|ZP_06439310.1| 3-isopropylmalate dehydratase, small subunit [Anaerobaculum
hydrogeniformans ATCC BAA-1850]
gi|289504292|gb|EFD25456.1| 3-isopropylmalate dehydratase, small subunit [Anaerobaculum
hydrogeniformans ATCC BAA-1850]
Length = 168
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/176 (36%), Positives = 94/176 (53%), Gaps = 24/176 (13%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G+ ++ G+NIDTDQI P YL L E + + +A+ G + ++
Sbjct: 8 GVVHIFGNNIDTDQIYPGRYLELT-----EPQDIAKHAMEGADEAFPSKV-------KPG 55
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG----EIYPLDSEA 187
II+AG NFGCGSSREHA + L AAG AV+A+S+ARIF+RN++ G EI LD
Sbjct: 56 DIIVAGKNFGCGSSREHAVITLLAAGVKAVIAKSFARIFYRNAINRGLCVVEIPDLD--- 112
Query: 188 RLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIF-AYARKT 241
+ G V++++ E R + G E + P D + + +AGG+ Y KT
Sbjct: 113 --LSKIQDGLSVSVDVREGRA-AFSNGYEARFVPFSDHILEIFEAGGVIPLYKSKT 165
>gi|114567649|ref|YP_754803.1| 3-isopropylmalate dehydratase small subunit [Syntrophomonas wolfei
subsp. wolfei str. Goettingen]
gi|114338584|gb|ABI69432.1| 3-isopropylmalate dehydratase, small subunit [Syntrophomonas wolfei
subsp. wolfei str. Goettingen]
Length = 163
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/177 (35%), Positives = 94/177 (53%), Gaps = 19/177 (10%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDEN--ET 127
+ G + G +IDTD IIPA YL +P E A + D + +
Sbjct: 3 YSGKVHKFGADIDTDAIIPARYLNTF--DPREL------------ALHCMEDADPDFPQK 48
Query: 128 KTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEA 187
II+A NFGCGSSREHAP+A+ AG S V+A S+ARIF+RN++ G + L+ EA
Sbjct: 49 VKPGDIIVADKNFGCGSSREHAPIAIKGAGVSCVIASSFARIFYRNAINIG-LPILECEA 107
Query: 188 RLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARKTGM 243
+ E GD V IE+ + N ++GKE++ P + + ++ GG+ Y + G+
Sbjct: 108 AV-EGIKAGDEVEIELESGHIKNLSSGKEFQAMPFPEFMQGIMAKGGLINYVKGKGV 163
>gi|434381940|ref|YP_006703723.1| 3-isopropylmalate dehydratase small subunit [Brachyspira pilosicoli
WesB]
gi|404430589|emb|CCG56635.1| 3-isopropylmalate dehydratase small subunit [Brachyspira pilosicoli
WesB]
Length = 160
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 89/166 (53%), Gaps = 17/166 (10%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + GDN+DTD IIPA YL N + +L S+ + + + +
Sbjct: 5 GFVHKYGDNVDTDVIIPARYL-----NTANHRELASHCMEDIDKDFVGKV-------KAG 52
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG-EIYPLDSEARLC 190
I++ G NFGCGSSREHAP+A+ +G S V+A S+ARIF+RNS+ G I D ++
Sbjct: 53 DIMVGGENFGCGSSREHAPIAIKESGISCVIASSFARIFYRNSINIGLAILECDEASK-- 110
Query: 191 EECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIF 235
+ + GD V ++ + N T + YK +P + + +I++ G+
Sbjct: 111 -KINAGDEVEVDFDSGIITNITKNESYKAEPFPEFIKNIINSNGLL 155
>gi|410668304|ref|YP_006920675.1| 3-isopropylmalate dehydratase small subunit [Thermacetogenium
phaeum DSM 12270]
gi|409106051|gb|AFV12176.1| 3-isopropylmalate dehydratase small subunit LeuD [Thermacetogenium
phaeum DSM 12270]
Length = 166
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 90/172 (52%), Gaps = 19/172 (11%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + G+++DTD IIPA YL ++P E A + D K
Sbjct: 5 GRVWKFGNDVDTDLIIPARYLNT--TDPQEL------------AAHCMEDADPGFAKVVQ 50
Query: 132 K--IIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
K I++AG NFGCGSSREHAP+A+ AAG S V+A ++ARIF+RN+V G P+
Sbjct: 51 KGDILVAGKNFGCGSSREHAPIAIKAAGVSCVIAATFARIFYRNAVNIG--LPILECPEA 108
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
GDVV ++++ + N + E++ P + +I AGG+ Y ++
Sbjct: 109 AAALQQGDVVEVDLSTGIIKNLSRPGEHQAAPFPPFMQEIIKAGGLINYVQE 160
>gi|392408062|ref|YP_006444670.1| 3-isopropylmalate dehydratase small subunit [Anaerobaculum mobile
DSM 13181]
gi|390621198|gb|AFM22345.1| 3-isopropylmalate dehydratase, small subunit [Anaerobaculum mobile
DSM 13181]
Length = 165
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/163 (34%), Positives = 90/163 (55%), Gaps = 15/163 (9%)
Query: 78 GDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKIIIAG 137
GD+++TD IIP YL+L ++P E L + + G+ + + I++ G
Sbjct: 11 GDHVNTDVIIPGAYLSL--TDPKE---LAKHCMEGIDPDFPKKV-------KAGDIVVGG 58
Query: 138 GNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEECSTGD 197
NFGCGSSREHAP+AL G AVVA+S+A IF+RN++ G PL +E GD
Sbjct: 59 VNFGCGSSREHAPMALKGCGVGAVVAKSFAAIFYRNAINIG--LPLIECPEAVDETDEGD 116
Query: 198 VVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYAR 239
V+ I++ L N T G+ Y++ + + + ++ GG+ Y +
Sbjct: 117 VLEIDMDLGVLQNITKGRSYQIPSLPESIKDILSLGGLIEYVK 159
>gi|160903025|ref|YP_001568606.1| 3-isopropylmalate dehydratase, small subunit [Petrotoga mobilis
SJ95]
gi|160360669|gb|ABX32283.1| 3-isopropylmalate dehydratase, small subunit [Petrotoga mobilis
SJ95]
Length = 164
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 89/173 (51%), Gaps = 15/173 (8%)
Query: 69 TFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETK 128
F G + GDN+DTD IIPA YL +NP E E L + + + + +
Sbjct: 2 KFRGRVFKYGDNVDTDVIIPARYL----NNP-EPEILAQHCMEDIDKDFVKKV------- 49
Query: 129 TKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEAR 188
K II+AG NFG GSSREHAP+++ AAG S V+AES+ARIF+RN++ G P+
Sbjct: 50 QKGDIIVAGRNFGSGSSREHAPLSIKAAGVSCVIAESFARIFYRNAINIG--LPILISKE 107
Query: 189 LCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
G + +++ + + KEY + L +I +GG+ +K
Sbjct: 108 ASHNIQDGSEIEVDLDNGIIKDLKNKKEYYSEKYPKFLQEIISSGGLIEKIKK 160
>gi|337287201|ref|YP_004626674.1| 3-isopropylmalate dehydratase, small subunit [Thermodesulfatator
indicus DSM 15286]
gi|335360029|gb|AEH45710.1| 3-isopropylmalate dehydratase, small subunit [Thermodesulfatator
indicus DSM 15286]
Length = 170
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/170 (37%), Positives = 94/170 (55%), Gaps = 15/170 (8%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + G++IDTD IIPA YL S+P E L + + + E K
Sbjct: 6 GRAWKFGNDIDTDIIIPARYLNT--SDPQE---LAKHCMEDARPEFA------KEVKPG- 53
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
II+AG NFGCGSSREHAP+A+ AAG + V+AE++ARIF+RN+ TG + L++ +
Sbjct: 54 DIIVAGKNFGCGSSREHAPIAIKAAGVACVIAENFARIFYRNAFNTG-LLILEAPG-AAK 111
Query: 192 ECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
E G V ++ + + TTGK Y +PI + ++ GG+ + +K
Sbjct: 112 EIEEGHEVEVDPESGTIKDLTTGKTYTFQPIPPFMQELLKDGGLIPHIKK 161
>gi|85860417|ref|YP_462619.1| aconitase C-terminal domain-containing protein, partial [Syntrophus
aciditrophicus SB]
gi|123517413|sp|Q2LWJ1.1|LEUD_SYNAS RecName: Full=3-isopropylmalate dehydratase small subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|85723508|gb|ABC78451.1| aconitase C-terminal domain protein [Syntrophus aciditrophicus SB]
Length = 164
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 91/174 (52%), Gaps = 16/174 (9%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
F G + GDNIDTD IIPA YL N + + L ++ + + + +
Sbjct: 3 FTGKVWKFGDNIDTDAIIPARYL-----NTFDPQALAAHCMEDADPDFPKKV-------S 50
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
II+AG NFGCGSSREHAP+A+ AAG S V+A+S+ARIF+RN+ G P+ A L
Sbjct: 51 AGDIIVAGENFGCGSSREHAPIAIKAAGVSCVIAKSFARIFYRNAFNMG--LPIFESAEL 108
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAY-ARKT 241
+ G +T++ ++ ++PI + +I GG+ + ARK
Sbjct: 109 FDRVDEGQTITVDGDSGVILLEGAQTPLSIQPIPPFMQELIADGGLMKHLARKN 162
>gi|300869822|ref|YP_003784693.1| 3-isopropylmalate dehydratase small subunit [Brachyspira pilosicoli
95/1000]
gi|300687521|gb|ADK30192.1| 3-isopropylmalate dehydratase, small subunit [Brachyspira
pilosicoli 95/1000]
Length = 160
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 89/166 (53%), Gaps = 17/166 (10%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + GDN+DTD IIPA YL N +++L S+ + + + +
Sbjct: 5 GFVHKYGDNVDTDVIIPARYL-----NTANHKELASHCMEDIDKDFVGKV-------KAG 52
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG-EIYPLDSEARLC 190
I++ G NFGCGSSREHAP+A+ +G S V+A S+ARIF+RNS+ G I D ++
Sbjct: 53 DIMVGGENFGCGSSREHAPIAIKESGISCVIASSFARIFYRNSINIGLAILECDEASK-- 110
Query: 191 EECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIF 235
+ + GD V ++ + N T + YK +P + + +I+ G+
Sbjct: 111 -KINAGDEVEVDFDSGIITNITKNESYKAEPFPEFIKNIINTNGLL 155
>gi|325969040|ref|YP_004245232.1| 3-isopropylmalate dehydratase small subunit [Vulcanisaeta
moutnovskia 768-28]
gi|323708243|gb|ADY01730.1| 3-isopropylmalate dehydratase, small subunit [Vulcanisaeta
moutnovskia 768-28]
Length = 174
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/165 (37%), Positives = 92/165 (55%), Gaps = 17/165 (10%)
Query: 77 VGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGL-PATYTTRFIDENETKTKYKIII 135
VGDNIDTD IIPA YL V ++P L +A+ L P Y E ++ +++
Sbjct: 20 VGDNIDTDVIIPARYL--VYTDP---AILAKHAMEPLDPHFY--------ENASRGVVLV 66
Query: 136 AGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEECST 195
AG FG GSSRE A +AL AAG AV+AES+ARIF+RN++ G P+ + E +
Sbjct: 67 AGRAFGMGSSREQAAIALKAAGVRAVLAESFARIFYRNAINNG--LPVLVVPNVSREVNE 124
Query: 196 GDVVTIEIAESRLINHTTGKEYKLKPIGDLG-PVIDAGGIFAYAR 239
GD V + ++ +I + K + KPI + ++ +GG+ Y +
Sbjct: 125 GDFVKVNVSTGEVIVNNGQKVLRAKPITGMALEILISGGLLEYVK 169
>gi|325678310|ref|ZP_08157936.1| 3-isopropylmalate dehydratase, small subunit [Ruminococcus albus 8]
gi|324109990|gb|EGC04180.1| 3-isopropylmalate dehydratase, small subunit [Ruminococcus albus 8]
Length = 161
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 89/165 (53%), Gaps = 15/165 (9%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + GDN+DTD IIPA YL N E+L + + + ID + K
Sbjct: 5 GKVHKYGDNVDTDVIIPARYL-----NTANMEELAQHCMEDID-------IDFAKNVKKG 52
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
I++A NFGCGSSREHAP ++ A+G S V+A+S+ARIF+RN++ G P+ E
Sbjct: 53 DIMVAKANFGCGSSREHAPASIKASGISCVIAKSFARIFYRNAINIG--LPIIECEDAAE 110
Query: 192 ECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIF 235
+ GD V I+ + N T G+ Y+ + + L +I++ G+
Sbjct: 111 KIEAGDEVEIDFDTGVITNKTKGESYQGQSFPEFLIKIINSNGLL 155
>gi|291538839|emb|CBL11950.1| 3-isopropylmalate dehydratase, small subunit [Roseburia
intestinalis XB6B4]
Length = 162
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/174 (35%), Positives = 89/174 (51%), Gaps = 23/174 (13%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + GDN+DTD IIPA YL S+P E A + ID++ K
Sbjct: 6 GHVFKYGDNVDTDVIIPARYLN--SSDPKEL------------ALHCMEDIDKDFVKNVK 51
Query: 132 --KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
I++A NFGCGSSREHAP+A+ AAG S V+AE++ARIF+RN++ G P+ +
Sbjct: 52 AGDIMVANKNFGCGSSREHAPIAIKAAGVSCVIAETFARIFYRNAINIG--LPIIECPQA 109
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYK---LKPIGDLGPVIDAGGIFAYARK 240
+E GD V + + + T G Y+ P + +ID G+ Y +
Sbjct: 110 AKEIEAGDEVEVNFDTGVITDVTKGTSYQGQAFPPF--MQKIIDCEGLVNYINQ 161
>gi|429767828|ref|ZP_19300011.1| 3-isopropylmalate dehydratase, small subunit [Brevundimonas
diminuta 470-4]
gi|429189715|gb|EKY30535.1| 3-isopropylmalate dehydratase, small subunit [Brevundimonas
diminuta 470-4]
Length = 162
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 87/170 (51%), Gaps = 17/170 (10%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G +V GDNIDTD + P + L P E+L + L + + T K
Sbjct: 3 GRAFVFGDNIDTDVMAPGTLMKLPP------EELAQHCLAAVDPDFA-------RTVAKG 49
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
++ G +FG GSSRE A V+L G AV+A S+ARIF+RN++ G +A
Sbjct: 50 DFVVGGRSFGIGSSREQAAVSLSLLGVRAVIARSFARIFWRNAINLGVPCITLEQA---S 106
Query: 192 ECSTGDVVTIEIAESRLINHTTGKEYKLKPI-GDLGPVIDAGGIFAYARK 240
E S GD + +++A RL N TTG+ Y P+ L ++D GG+ + +K
Sbjct: 107 EISAGDRLEVDLAAGRLTNLTTGRGYDFTPLPPHLMAMMDDGGLMPHLKK 156
>gi|150015107|ref|YP_001307361.1| 3-isopropylmalate dehydratase small subunit [Clostridium
beijerinckii NCIMB 8052]
gi|226736041|sp|A6LPX5.1|LEUD_CLOB8 RecName: Full=3-isopropylmalate dehydratase small subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|149901572|gb|ABR32405.1| 3-isopropylmalate dehydratase, small subunit [Clostridium
beijerinckii NCIMB 8052]
Length = 161
Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 88/172 (51%), Gaps = 15/172 (8%)
Query: 69 TFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETK 128
+ G + GDN+DTD IIPA YL +N +L ++ + + +
Sbjct: 2 SVKGKVFKYGDNVDTDVIIPARYLNTSDAN-----ELAAHCMEDIDVDFVKNV------- 49
Query: 129 TKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEAR 188
II+A NFGCGSSREHAP+A+ AG S V+A ++ARIF+RN++ G P+
Sbjct: 50 KSGDIIVANKNFGCGSSREHAPLAIKTAGVSCVIASTFARIFYRNAINIG--LPILECDE 107
Query: 189 LCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYAR 239
+ GD + ++ + + N T +EY+ + + + +ID G+ Y R
Sbjct: 108 AVKNIDAGDELEVDFSTGLIKNLTKSQEYQGEAFPEFMQKIIDNDGLIGYIR 159
>gi|405984415|ref|ZP_11042718.1| 3-isopropylmalate dehydratase small subunit [Slackia piriformis YIT
12062]
gi|404388247|gb|EJZ83331.1| 3-isopropylmalate dehydratase small subunit [Slackia piriformis YIT
12062]
Length = 165
Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 92/175 (52%), Gaps = 15/175 (8%)
Query: 69 TFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETK 128
T G + GDN+DTD IIPA YL + ++P E L ++A+ + ++
Sbjct: 4 TVRGTAFKYGDNVDTDVIIPARYLNI--ADPQE---LATHAMEDIDPSFVRNV------- 51
Query: 129 TKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEAR 188
I++A NFGCGSSREHAP L G + V+A S+ARIF+RN++ G P+ +
Sbjct: 52 KPGDIVVATKNFGCGSSREHAPRVLKDNGVACVIASSFARIFYRNAINIG--LPILECEQ 109
Query: 189 LCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARKTG 242
+ GD VT++ + ++N TT + ++ P + + ++D G+ + G
Sbjct: 110 AAKAIRGGDEVTVDFSTGTIVNETTSETFEALPFPEFIQQIVDNEGLLNSLKARG 164
>gi|20090087|ref|NP_616162.1| 3-isopropylmalate dehydratase [Methanosarcina acetivorans C2A]
gi|23396648|sp|Q8TRF7.1|LEUD3_METAC RecName: Full=3-isopropylmalate dehydratase small subunit 3;
AltName: Full=Alpha-IPM isomerase 3; Short=IPMI 3;
AltName: Full=Isopropylmalate isomerase 3
gi|19915063|gb|AAM04642.1| 3-isopropylmalate dehydratase [Methanosarcina acetivorans C2A]
Length = 164
Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 97/171 (56%), Gaps = 19/171 (11%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + GD+I+TD IIP +YL + + G++A+ G+ +T +
Sbjct: 7 GRVWKFGDDINTDAIIPGKYL-----RTRDMQIFGTHAMEGIDPEFTKK-------AKPG 54
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
II+AG NFGCGSSRE AP+AL +G + +VA+S+ARIFFRN++ G PL EA +
Sbjct: 55 DIIVAGTNFGCGSSREQAPLALKHSGIACIVAKSFARIFFRNAINIG--LPL-MEADV-- 109
Query: 192 ECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARKT 241
EC GD + +++ + ++ G +K + D L +++ GG+ A+ +K
Sbjct: 110 ECQEGDEIKVDLFKGEVLVPEKGI-FKGNKLPDFLLDILNDGGLVAHRKKV 159
>gi|160942995|ref|ZP_02090233.1| hypothetical protein FAEPRAM212_00472 [Faecalibacterium prausnitzii
M21/2]
gi|158445689|gb|EDP22692.1| 3-isopropylmalate dehydratase, small subunit [Faecalibacterium
prausnitzii M21/2]
Length = 162
Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 85/163 (52%), Gaps = 15/163 (9%)
Query: 79 DNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKIIIAGG 138
DN+DTD IIPA +L N + ++L S+ + + + R I++ G
Sbjct: 14 DNVDTDVIIPARHL-----NTQDAKELASHCMEDIDKDFVNRV-------QPGDIMVGGW 61
Query: 139 NFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEECSTGDV 198
NFGCGSSREHAP+ + AG + V+A+S+ARIF+RNS+ G P+ + GD
Sbjct: 62 NFGCGSSREHAPLCIKTAGIAVVIAKSFARIFYRNSINIG--LPIMECPEAVDAIEAGDT 119
Query: 199 VTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
V ++ + + T GK + +P + +I AGG+ +K
Sbjct: 120 VQVDFNTGVITDETNGKVFHAEPFPPFIQNIISAGGLMKAIQK 162
>gi|392962043|ref|ZP_10327490.1| 3-isopropylmalate dehydratase small subunit [Pelosinus fermentans
DSM 17108]
gi|421056102|ref|ZP_15519029.1| 3-isopropylmalate dehydratase, small subunit [Pelosinus fermentans
B4]
gi|421058153|ref|ZP_15520877.1| 3-isopropylmalate dehydratase small subunit [Pelosinus fermentans
B3]
gi|421069005|ref|ZP_15530189.1| 3-isopropylmalate dehydratase small subunit [Pelosinus fermentans
A12]
gi|421072920|ref|ZP_15534024.1| 3-isopropylmalate dehydratase small subunit [Pelosinus fermentans
A11]
gi|392437468|gb|EIW15351.1| 3-isopropylmalate dehydratase small subunit [Pelosinus fermentans
A12]
gi|392438518|gb|EIW16341.1| 3-isopropylmalate dehydratase, small subunit [Pelosinus fermentans
B4]
gi|392445347|gb|EIW22679.1| 3-isopropylmalate dehydratase small subunit [Pelosinus fermentans
A11]
gi|392452801|gb|EIW29706.1| 3-isopropylmalate dehydratase small subunit [Pelosinus fermentans
DSM 17108]
gi|392461352|gb|EIW37556.1| 3-isopropylmalate dehydratase small subunit [Pelosinus fermentans
B3]
Length = 187
Score = 93.2 bits (230), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 96/180 (53%), Gaps = 19/180 (10%)
Query: 64 KEPTATFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFID 123
+E G + G+++DTDQIIP++YL L+P N +E ++ YT +D
Sbjct: 23 REMINVITGKAWKFGNDVDTDQIIPSQYL-LLP-NVEEMKQ------------YTFEPLD 68
Query: 124 ENETKTKY--KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIY 181
EN T II+ G NFG GSSRE AP+ L A G SAVVA+S+ARIFFRN++ G
Sbjct: 69 ENFASTVCPGDIIVGGENFGSGSSREQAPLVLKALGISAVVAKSFARIFFRNAINIG--L 126
Query: 182 PLDSEARLCEECSTGDVVTIEIAESRLINHTTGKEY-KLKPIGDLGPVIDAGGIFAYARK 240
P+ + + D + I++ + + N T + + K + +++AGG+ + K
Sbjct: 127 PVVICKEVYDAVEQNDTLEIDVLKGTIKNVTEDRNFTSTKLPAHVMNILEAGGLIGFLNK 186
>gi|126460208|ref|YP_001056486.1| 3-isopropylmalate dehydratase small subunit [Pyrobaculum
calidifontis JCM 11548]
gi|171855104|sp|A3MWK3.1|LEUD_PYRCJ RecName: Full=3-isopropylmalate dehydratase small subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|126249929|gb|ABO09020.1| 3-isopropylmalate dehydratase, small subunit [Pyrobaculum
calidifontis JCM 11548]
Length = 161
Score = 93.2 bits (230), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 65/172 (37%), Positives = 93/172 (54%), Gaps = 18/172 (10%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFID-ENETK 128
G V GD IDTD IIPA+YL V ++P A++G + ID E K
Sbjct: 3 IRGRAIVYGDKIDTDVIIPAKYL--VYTDP---------AILG---QHAMEPIDPEFPKK 48
Query: 129 TKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEAR 188
K I++AG FG GSSRE A +AL AG AVVAES+ARIF+RN++ G P+
Sbjct: 49 AKGAILVAGRAFGMGSSREQAAIALKGAGVLAVVAESFARIFYRNAINVG--LPVLQAPG 106
Query: 189 LCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLG-PVIDAGGIFAYAR 239
+ + GD + +++ + N TTG+ + KP+ L ++ AGG+ Y +
Sbjct: 107 VRAKVREGDELEVDLTGGVVRNLTTGEAIQGKPLAGLPLEILKAGGLLQYLK 158
>gi|307594826|ref|YP_003901143.1| 3-isopropylmalate dehydratase small subunit [Vulcanisaeta
distributa DSM 14429]
gi|307550027|gb|ADN50092.1| 3-isopropylmalate dehydratase, small subunit [Vulcanisaeta
distributa DSM 14429]
Length = 173
Score = 93.2 bits (230), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 62/164 (37%), Positives = 88/164 (53%), Gaps = 15/164 (9%)
Query: 77 VGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKIIIA 136
VGDNIDTD IIPA YL V ++P K LI P + E K I++A
Sbjct: 19 VGDNIDTDVIIPARYL--VYTDPSILAKHAMEPLI--PNFF--------EKANKGVILVA 66
Query: 137 GGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEECSTG 196
G FG GSSRE A +AL AAG AV+AES+ARIF+RN++ G P+ + E + G
Sbjct: 67 GRGFGMGSSREQAAIALKAAGVKAVLAESFARIFYRNAINNG--LPVLVVPGVSREVNDG 124
Query: 197 DVVTIEIAESRLINHTTGKEYKLKPIGDLG-PVIDAGGIFAYAR 239
D V + + +I + K + +PI + ++ +GG+ Y +
Sbjct: 125 DFVRVNVGTGEVIINNGQKILRARPITGMALEILMSGGLLEYIK 168
>gi|295103472|emb|CBL01016.1| 3-isopropylmalate dehydratase, small subunit [Faecalibacterium
prausnitzii SL3/3]
Length = 160
Score = 93.2 bits (230), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 85/163 (52%), Gaps = 15/163 (9%)
Query: 79 DNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKIIIAGG 138
DN+DTD IIPA +L N + ++L S+ + + + R I++ G
Sbjct: 12 DNVDTDVIIPARHL-----NTQDAKELASHCMEDIDKDFVNRV-------QPGDIMVGGW 59
Query: 139 NFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEECSTGDV 198
NFGCGSSREHAP+ + AG + V+A+S+ARIF+RNS+ G P+ + GD
Sbjct: 60 NFGCGSSREHAPLCIKTAGIAVVIAKSFARIFYRNSINIG--LPIMECPEAVDAIEAGDT 117
Query: 199 VTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
V ++ + + T GK + +P + +I AGG+ +K
Sbjct: 118 VQVDFDTGVITDETNGKVFHAEPFPPFIQNIISAGGLMKAIQK 160
>gi|261349846|ref|ZP_05975263.1| 3-isopropylmalate dehydratase, small subunit [Methanobrevibacter
smithii DSM 2374]
gi|288860630|gb|EFC92928.1| 3-isopropylmalate dehydratase, small subunit [Methanobrevibacter
smithii DSM 2374]
Length = 160
Score = 93.2 bits (230), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 50/109 (45%), Positives = 64/109 (58%), Gaps = 12/109 (11%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
G + GD+IDTD I+P YL DE E+L + + GL + NE
Sbjct: 1 MKGTVWKFGDDIDTDIILPGRYLIYT----DE-ERLSQHCMEGLDDKF-------NEKCK 48
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG 178
K I+AG NFGCGSSREHAP+AL G +AV+AES+ARIF+RN+ G
Sbjct: 49 KGDFIVAGKNFGCGSSREHAPIALKGVGVAAVIAESFARIFYRNATNVG 97
>gi|410583005|ref|ZP_11320111.1| 3-isopropylmalate dehydratase, small subunit [Thermaerobacter
subterraneus DSM 13965]
gi|410505825|gb|EKP95334.1| 3-isopropylmalate dehydratase, small subunit [Thermaerobacter
subterraneus DSM 13965]
Length = 178
Score = 93.2 bits (230), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 92/170 (54%), Gaps = 15/170 (8%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + GD+I+TD IIPA YL ++P E L ++ + L ++ +
Sbjct: 2 GRVWKYGDDINTDVIIPARYL--FTTDPAE---LAAHCMEDLDPSFAS-------GVRPG 49
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
+I+AG NFGCGSSREHAPVA+ AAG V+A S+ARIF+RN++ G P+
Sbjct: 50 DVIVAGRNFGCGSSREHAPVAIRAAGVQCVIARSFARIFYRNAINVG--LPILECPDAVA 107
Query: 192 ECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
TG+ V +++A + TG+ ++ P + ++ GG+ YAR+
Sbjct: 108 ALETGEQVEVDLAAGTIRRVATGETFQAAPFPPFMQEILRCGGLVEYARR 157
>gi|338811174|ref|ZP_08623405.1| 3-isopropylmalate dehydratase, small subunit [Acetonema longum DSM
6540]
gi|337276857|gb|EGO65263.1| 3-isopropylmalate dehydratase, small subunit [Acetonema longum DSM
6540]
Length = 175
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/167 (37%), Positives = 85/167 (50%), Gaps = 15/167 (8%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + GDNI TD I+P+ ++T V N +L + L G + + +
Sbjct: 10 GRIWKFGDNISTDHILPSRFMTQVKPN-----ELAANCLAGADPEFAKKV-------QQG 57
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
I+ AG N G GSSRE AP AL AG SAV+A+S+ARIF+RN G P + E
Sbjct: 58 DIVAAGFNIGYGSSREQAPQALKWAGVSAVIAKSFARIFYRNCYNVG--VPAIVCPQFVE 115
Query: 192 ECSTGDVVTIEIAESRLINHTTGKEYK-LKPIGDLGPVIDAGGIFAY 237
E + D+ I + E + N TGKEY+ +KP L I GG+ Y
Sbjct: 116 ESTEMDLAEINLEEGIVTNLATGKEYRFVKPPAFLVEYIRLGGLIPY 162
>gi|291536288|emb|CBL09400.1| 3-isopropylmalate dehydratase, small subunit [Roseburia
intestinalis M50/1]
Length = 162
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 89/174 (51%), Gaps = 23/174 (13%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + GDN+DTD IIPA YL S+P E A + ID++ K
Sbjct: 6 GHVFKYGDNVDTDVIIPARYLN--SSDPKEL------------ALHCMEDIDKDFVKNVK 51
Query: 132 --KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
I++A NFGCGSSREHAP+++ AAG S V+AE++ARIF+RN++ G P+ +
Sbjct: 52 AGDIMVANKNFGCGSSREHAPISIKAAGVSCVIAETFARIFYRNAINIG--LPIIECPQA 109
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYK---LKPIGDLGPVIDAGGIFAYARK 240
+E GD V + + + T G Y+ P + +ID G+ Y +
Sbjct: 110 AKEIEAGDEVEVNFDTGVITDVTKGTSYQGQAFPPF--MQKIIDCEGLVNYINQ 161
>gi|167770724|ref|ZP_02442777.1| hypothetical protein ANACOL_02070 [Anaerotruncus colihominis DSM
17241]
gi|167667319|gb|EDS11449.1| 3-isopropylmalate dehydratase, small subunit [Anaerotruncus
colihominis DSM 17241]
Length = 165
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 86/173 (49%), Gaps = 15/173 (8%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + GDNIDTD IIPA L + + +L S+ + + T+ R
Sbjct: 5 GTVFKFGDNIDTDVIIPARCLNIT-----DRRELASHCMEDIDRTFVKRV-------HPG 52
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
+I+ G NFGCGSSREHAP+ + G S V+A+++ARIF+RN++ G P+ +
Sbjct: 53 DLIVGGFNFGCGSSREHAPMVIKENGVSCVIAKTFARIFYRNAINIG--LPILECPEASD 110
Query: 192 ECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARKTGM 243
GD V ++ + N T G+ Y P + +IDA G+ RK G
Sbjct: 111 SIQDGDKVEVDFDTGIIHNVTRGETYTAAPFPPFIKEIIDANGLLNAIRKKGQ 163
>gi|325290262|ref|YP_004266443.1| 3-isopropylmalate dehydratase small subunit [Syntrophobotulus
glycolicus DSM 8271]
gi|324965663|gb|ADY56442.1| 3-isopropylmalate dehydratase, small subunit [Syntrophobotulus
glycolicus DSM 8271]
Length = 162
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 89/170 (52%), Gaps = 15/170 (8%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + G++IDTD IIPA +L N + E L ++ + + E KT
Sbjct: 2 GKAWKFGNDIDTDVIIPARHL-----NRSDSEYLAAHCMEDADPDFA------REVKTG- 49
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
III G NFGCGSSREHAP+++ AAG AV+A S+ARIF+RNS+ P+
Sbjct: 50 DIIIGGKNFGCGSSREHAPLSIKAAGVKAVIANSFARIFYRNSLNIA--MPILECPEAVA 107
Query: 192 ECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
GD V +++ + N T G ++ +P + +I AGG+ Y ++
Sbjct: 108 GIEHGDEVEVDLETGAIKNMTKGTSFQARPFPPFMQELIKAGGLVPYVKE 157
>gi|392407703|ref|YP_006444311.1| 3-isopropylmalate dehydratase small subunit [Anaerobaculum mobile
DSM 13181]
gi|390620839|gb|AFM21986.1| 3-isopropylmalate dehydratase, small subunit [Anaerobaculum mobile
DSM 13181]
Length = 174
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/170 (37%), Positives = 93/170 (54%), Gaps = 25/170 (14%)
Query: 71 HGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTK 130
G ++ GDNIDTDQI P YL L + P + + ++ + G A++ + K K
Sbjct: 8 RGRIFIFGDNIDTDQIYPGRYLEL--TEPGD---IATHVMEGADASFPS--------KVK 54
Query: 131 Y-KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG----EIYPLDS 185
II+AG NFGCGSSREHA + L AAG AVVA+S+ARIF+RN++ G E+ LD
Sbjct: 55 VGDIIVAGKNFGCGSSREHAVITLQAAGIKAVVAKSFARIFYRNAINRGLCVIEVQGLD- 113
Query: 186 EARLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGI 234
+ G V I++ + I+ + G E P + + ++ AGG+
Sbjct: 114 ----LSKIQDGLTVNIDVRNGK-ISFSNGYELSFVPFSEHILDILAAGGV 158
>gi|269797165|ref|YP_003311065.1| 3-isopropylmalate dehydratase small subunit [Veillonella parvula
DSM 2008]
gi|294793263|ref|ZP_06758409.1| 3-isopropylmalate dehydratase, small subunit [Veillonella sp.
6_1_27]
gi|294794707|ref|ZP_06759842.1| 3-isopropylmalate dehydratase, small subunit [Veillonella sp.
3_1_44]
gi|269093794|gb|ACZ23785.1| 3-isopropylmalate dehydratase, small subunit [Veillonella parvula
DSM 2008]
gi|294454069|gb|EFG22443.1| 3-isopropylmalate dehydratase, small subunit [Veillonella sp.
3_1_44]
gi|294456208|gb|EFG24572.1| 3-isopropylmalate dehydratase, small subunit [Veillonella sp.
6_1_27]
Length = 163
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 90/167 (53%), Gaps = 15/167 (8%)
Query: 74 CYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKI 133
+ GD++DTD IIPA YL + ++ +L +A+ + T+ +I
Sbjct: 8 IWRYGDDVDTDVIIPARYLAIA-----DWNELAEHAMEDIDTTFAPNV-------KAGEI 55
Query: 134 IIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEEC 193
++AG NFGCGSSREHAP + A G ++A S+ARIFFRN++ G P+ +
Sbjct: 56 MVAGKNFGCGSSREHAPGVIKAKGVPVIIAHSFARIFFRNAINIG--LPVVEIGEQVDRI 113
Query: 194 STGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYAR 239
GD + +++++ + N T ++Y+ + + + AGG+ ++A+
Sbjct: 114 DAGDAIGVDLSKGIVYNLTKNEQYQGTELPQFIQDIAAAGGLVSFAK 160
>gi|347531887|ref|YP_004838650.1| 3-isopropylmalate dehydratase small subunit [Roseburia hominis
A2-183]
gi|345502035|gb|AEN96718.1| 3-isopropylmalate dehydratase small subunit [Roseburia hominis
A2-183]
Length = 162
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 90/175 (51%), Gaps = 25/175 (14%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + GDN+DTD IIPA YL S+P E AT+ ID++ K K
Sbjct: 6 GHVFKYGDNVDTDVIIPARYLN--SSDPKEL------------ATHCMEDIDKDFVK-KV 50
Query: 132 K---IIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEAR 188
K II+A NFGCGSSREHAP+A+ A+G S V+AE++ARIF+RN++ G P+
Sbjct: 51 KAGDIIVANKNFGCGSSREHAPIAIKASGVSCVIAETFARIFYRNAINIG--LPIIECPE 108
Query: 189 LCEECSTGDVVTIEIAESRLINHTTGKEYK---LKPIGDLGPVIDAGGIFAYARK 240
+ GD V ++ + + T Y+ P + +ID G+ Y +
Sbjct: 109 AAKAIEAGDEVEVDFDSGIITDKTKNTSYQGQAFPPF--MQKIIDCEGLVNYINQ 161
>gi|296131905|ref|YP_003639152.1| 3-isopropylmalate dehydratase small subunit [Thermincola potens JR]
gi|296030483|gb|ADG81251.1| 3-isopropylmalate dehydratase, small subunit [Thermincola potens
JR]
Length = 164
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 90/170 (52%), Gaps = 15/170 (8%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + G ++DTD IIPA YL S+P E L + + + + +
Sbjct: 5 GRTWKFGADVDTDAIIPARYLNT--SDPIE---LAKHCMEDADPEFPGKV-------RQG 52
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
II+A NFGCGSSREHAP+A+ AAG S VVA+S+ARIF+RN+ G P+ +
Sbjct: 53 DIIVADKNFGCGSSREHAPIAIKAAGVSCVVAKSFARIFYRNAFNIG--LPIFESPEAVD 110
Query: 192 ECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
GD + ++ + + N TG+++ I + +I+AGG+ Y ++
Sbjct: 111 AIQEGDEIAVDTEKGIITNLRTGRQFSSTAIPPFMQELIEAGGLINYVKR 160
>gi|212704845|ref|ZP_03312973.1| hypothetical protein DESPIG_02912 [Desulfovibrio piger ATCC 29098]
gi|212671807|gb|EEB32290.1| 3-isopropylmalate dehydratase small subunit [Desulfovibrio piger
ATCC 29098]
Length = 166
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 92/173 (53%), Gaps = 15/173 (8%)
Query: 69 TFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETK 128
+ G + VG++IDTD IIPA +L V S+ E LG+ + GL + R
Sbjct: 2 NYKGTAHKVGEHIDTDAIIPARFL--VTSDAKE---LGANCMAGLEPDWVKRV------- 49
Query: 129 TKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEAR 188
I++AG NFGCGSSREHAP+A+ AG V+ S+ARIF+RN+ G + L
Sbjct: 50 KPGDIMVAGRNFGCGSSREHAPIAILGAGMPVVIGHSFARIFYRNAFNMGLL--LMEVGD 107
Query: 189 LCEECSTGDVVTIEIAESRLINHTTGKEYKLKPI-GDLGPVIDAGGIFAYARK 240
++ + GD + ++ A + + T G E + P+ + ++ GG+ Y ++
Sbjct: 108 DVDKINDGDELEVDAATGVIRDLTNGAEIQCPPLPASMAAILAKGGLVNYVKE 160
>gi|410457500|ref|ZP_11311295.1| 3-isopropylmalate dehydratase small subunit [Bacillus azotoformans
LMG 9581]
gi|409934253|gb|EKN71166.1| 3-isopropylmalate dehydratase small subunit [Bacillus azotoformans
LMG 9581]
Length = 165
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 94/179 (52%), Gaps = 27/179 (15%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
F G +V G++IDTD+IIP +Y + ++L + L + ++ + +
Sbjct: 3 FTGTSHVYGNDIDTDRIIPGKYTKTL-----NMQELADHVFEDLDPDFRSKLVPGD---- 53
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG----EI--YPL 183
I++AG NFGCGSSRE AP+AL AG S V+A S+ARIFFRN++ G EI + +
Sbjct: 54 ---ILVAGTNFGCGSSREQAPLALKNAGVSVVIARSFARIFFRNAINIGLPILEIKDHTI 110
Query: 184 DSEARLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLGPVIDAGGIFAYARKTG 242
+ + +L STG+V + E+ G E I +I+ GG+ Y +K G
Sbjct: 111 NDKDKLEVNLSTGEVKNLTTEETH-----KGTEMPSVMI----DIINDGGLVQYFKKRG 160
>gi|435850692|ref|YP_007312278.1| 3-isopropylmalate dehydratase, small subunit [Methanomethylovorans
hollandica DSM 15978]
gi|433661322|gb|AGB48748.1| 3-isopropylmalate dehydratase, small subunit [Methanomethylovorans
hollandica DSM 15978]
Length = 159
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 90/169 (53%), Gaps = 20/169 (11%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G +V GD+IDTD IIP +YL + + +A+ G+ ++ +
Sbjct: 4 GKVWVFGDDIDTDVIIPGKYLRTT-----DMQVFADHAMEGIDPDFSKKI-------KPG 51
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
I++ G NFGCGSSRE A +AL AG + VVA S+ RIFFRN++ G PL EA +
Sbjct: 52 DIVVGGNNFGCGSSREQAALALKFAGVACVVARSFGRIFFRNAINVG--LPL-MEADV-- 106
Query: 192 ECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYAR 239
+C GD + +++ + GK+Y + D L +++ GG+ A+ R
Sbjct: 107 QCQEGDEIEVDLENGKAT--VNGKQYSGNKLPDFLLEILNDGGLVAHRR 153
>gi|383320570|ref|YP_005381411.1| 3-isopropylmalate dehydratase small subunit [Methanocella conradii
HZ254]
gi|379321940|gb|AFD00893.1| 3-isopropylmalate dehydratase, small subunit [Methanocella conradii
HZ254]
Length = 170
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 90/163 (55%), Gaps = 12/163 (7%)
Query: 80 NIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKIIIAGGN 139
+ +TD++I +Y + + +KL +A + T+ + K K I++A N
Sbjct: 17 DTNTDEVISGKY----KYDELDLKKLAVHAFESIDPTFYA-----DSQKVKDPILVASTN 67
Query: 140 FGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEECSTGDVV 199
FGCGSSRE AP + A G S ++AESYARIF+RN G PL + +E GD +
Sbjct: 68 FGCGSSREQAPQVILACGVSCIIAESYARIFYRNGFNIG--LPLIECKGISKEARQGDEL 125
Query: 200 TIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARKT 241
++ +++ + N TTGK +KPI + + +++AGG+ Y +K
Sbjct: 126 EVDFSKNEVRNLTTGKVLPMKPIPEFMQQLLEAGGLMPYLKKQ 168
>gi|239617607|ref|YP_002940929.1| 3-isopropylmalate dehydratase small subunit [Kosmotoga olearia TBF
19.5.1]
gi|239506438|gb|ACR79925.1| 3-isopropylmalate dehydratase, small subunit [Kosmotoga olearia TBF
19.5.1]
Length = 167
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/172 (35%), Positives = 89/172 (51%), Gaps = 15/172 (8%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + GD+I TD I P Y L + P+ + + A P K
Sbjct: 5 GKVWKFGDDISTDHIAPGRYFHLRTNLPELAKHVLEDAREDFPKIVK-----------KG 53
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
II+AG NFG GSSREHAP + AG S ++A+S+ARIF+RNS+ G PL E +
Sbjct: 54 DIIVAGKNFGMGSSREHAPRIIKLAGISCIIAKSFARIFYRNSINIG--LPL-VEIEETD 110
Query: 192 ECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARKTG 242
E GDV+ +++ + N T GK Y+ P+ D + +++ GGI Y ++ G
Sbjct: 111 EIDEGDVIEVDLRNGIVKNLTKGKTYRFNPMPDFILKIVEKGGIRNYIKEFG 162
>gi|313893826|ref|ZP_07827392.1| 3-isopropylmalate dehydratase small subunit [Veillonella sp. oral
taxon 158 str. F0412]
gi|313441390|gb|EFR59816.1| 3-isopropylmalate dehydratase small subunit [Veillonella sp. oral
taxon 158 str. F0412]
Length = 163
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 89/167 (53%), Gaps = 15/167 (8%)
Query: 74 CYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKI 133
+ GD++DTD IIPA YL + ++ +L +A+ + T+ +I
Sbjct: 8 IWRYGDDVDTDVIIPARYLAIA-----DWNELAEHAMEDIDTTFAPNV-------KAGEI 55
Query: 134 IIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEEC 193
++AG NFGCGSSREHAP + A G +VA S+ARIFFRN++ G P+ +
Sbjct: 56 MVAGKNFGCGSSREHAPGVIKAKGVPVIVAHSFARIFFRNAINIG--LPVVEIGEQVDRI 113
Query: 194 STGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYAR 239
GD + +++++ + N T ++Y+ + + + AGG+ +A+
Sbjct: 114 DAGDAIGVDLSKGIVYNLTKNEQYQGTELPQFIQDIAAAGGLVNFAK 160
>gi|310828323|ref|YP_003960680.1| 2,3-dimethylmalate dehydratase small subunit [Eubacterium limosum
KIST612]
gi|308740057|gb|ADO37717.1| 2,3-dimethylmalate dehydratase small subunit [Eubacterium limosum
KIST612]
Length = 163
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/171 (34%), Positives = 90/171 (52%), Gaps = 15/171 (8%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + G+N+DTD IIPA YL S+P E L + + + + R D +
Sbjct: 5 GKVFRYGNNVDTDVIIPARYLN--TSDPLE---LAEHCMEDIDKDFIKRVEDGD------ 53
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
II+A NFGCGSSREHAP+A+ A+G S V+A S+ARIF+RNS+ G P+
Sbjct: 54 -IIVADDNFGCGSSREHAPIAIKASGVSCVIANSFARIFYRNSINIG--LPILECPEAVA 110
Query: 192 ECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARKT 241
GD V ++ + + T G+ ++ + + + +I AGG+ Y +
Sbjct: 111 AIEAGDEVEVDFDSGVITDVTKGQSFQGQAFPEFMQKLIAAGGLVNYVNEN 161
>gi|429760473|ref|ZP_19292944.1| homoaconitase small subunit [Veillonella atypica KON]
gi|429177305|gb|EKY18638.1| homoaconitase small subunit [Veillonella atypica KON]
Length = 163
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 89/167 (53%), Gaps = 15/167 (8%)
Query: 74 CYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKI 133
+ GD++DTD IIPA YL + ++ +L +A+ + T+ +I
Sbjct: 8 IWRYGDDVDTDVIIPARYLAIA-----DWNELAEHAMEDIDTTFAPNV-------KAGEI 55
Query: 134 IIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEEC 193
++AG NFGCGSSREHAP + A G ++A S+ARIFFRN++ G P+ +
Sbjct: 56 MVAGKNFGCGSSREHAPGVIKAKGVPVIIAHSFARIFFRNAINIG--LPVIEIGEQVDRI 113
Query: 194 STGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYAR 239
GD V +++++ + N T ++Y+ + + + AGG+ +A+
Sbjct: 114 DAGDAVGVDLSKGIVYNLTKNEQYQGTELPQFIQDIAAAGGLVNFAK 160
>gi|401680710|ref|ZP_10812620.1| 3-isopropylmalate dehydratase, small subunit [Veillonella sp. ACP1]
gi|400218049|gb|EJO48934.1| 3-isopropylmalate dehydratase, small subunit [Veillonella sp. ACP1]
Length = 163
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 89/167 (53%), Gaps = 15/167 (8%)
Query: 74 CYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKI 133
+ GD++DTD IIPA YL + ++ +L +A+ + T+ +I
Sbjct: 8 IWRYGDDVDTDVIIPARYLAIA-----DWNELAEHAMEDIDTTFAPNV-------KAGEI 55
Query: 134 IIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEEC 193
++AG NFGCGSSREHAP + A G +VA S+ARIFFRN++ G P+ +
Sbjct: 56 MVAGKNFGCGSSREHAPGVIKAKGVPVIVAHSFARIFFRNAINIG--LPVIEIGEQVDRI 113
Query: 194 STGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYAR 239
GD + +++++ + N T ++Y+ + + + AGG+ +A+
Sbjct: 114 DAGDAIGVDLSKGIVYNLTKNEQYQGTELPQFIQDIAAAGGLVNFAK 160
>gi|374636670|ref|ZP_09708227.1| 3-isopropylmalate dehydratase, small subunit [Methanotorris
formicicus Mc-S-70]
gi|373558225|gb|EHP84579.1| 3-isopropylmalate dehydratase, small subunit [Methanotorris
formicicus Mc-S-70]
Length = 169
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 95/175 (54%), Gaps = 22/175 (12%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
G ++ GD++DTD IIP YL D YE L S+ + G+ + R + +
Sbjct: 3 IRGKAHIFGDDVDTDAIIPGPYL----RTTDVYE-LASHCMAGIDEDFPKRVKEGD---- 53
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
+I+AG NFGCGSSRE AP+A+ G AV+AES+ARIF+RN++ G I P+ +
Sbjct: 54 ---VIVAGENFGCGSSREQAPIAIKYCGIRAVIAESFARIFYRNAINIGLI-PI-----V 104
Query: 190 CEECST----GDVVTIEIAESRLINHTTGKEYKLKPIGDLGPVIDAGGIFAYARK 240
C++ + GD + +++ ++I + P G ++++GG+ Y +K
Sbjct: 105 CKDITKYVKEGDAIEVDLENEKIIINDKLTLNCETPKGIEREILESGGLTNYIKK 159
>gi|345861116|ref|ZP_08813389.1| isopropylmalate/citramalate isomerase small subunit
[Desulfosporosinus sp. OT]
gi|344325790|gb|EGW37295.1| isopropylmalate/citramalate isomerase small subunit
[Desulfosporosinus sp. OT]
Length = 173
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/164 (37%), Positives = 86/164 (52%), Gaps = 23/164 (14%)
Query: 78 GDNIDTDQIIPAEYLTLVPSN---PDEYEKLGSYALIGLPATYTTRFIDENETKTKYKII 134
GDN+DTDQIIPA+YL+L P +E G++A N+ K II
Sbjct: 10 GDNVDTDQIIPAQYLSLSTIQQIAPHTFEFHGNFA---------------NDFKPG-DII 53
Query: 135 IAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEECS 194
NFGCGSSRE AP L G SAV+A S+ARIF+RN++ G + E +E
Sbjct: 54 CGNDNFGCGSSREQAPAVLQERGVSAVIARSFARIFYRNAINIGLLL---VECEKADEIR 110
Query: 195 TGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAY 237
GDV+ I+ + + N TT ++ P+ + +++ GGI Y
Sbjct: 111 HGDVLEIDPQKGVIRNITTDCNLEITPLPPFMQEILNCGGIVKY 154
>gi|416999721|ref|ZP_11940141.1| 3-isopropylmalate dehydratase small subunit [Veillonella parvula
ACS-068-V-Sch12]
gi|333976527|gb|EGL77394.1| 3-isopropylmalate dehydratase small subunit [Veillonella parvula
ACS-068-V-Sch12]
Length = 163
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 90/170 (52%), Gaps = 21/170 (12%)
Query: 74 CYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKI 133
+ GD++DTD IIPA YL + ++ +L +A+ + T+ +I
Sbjct: 8 IWRYGDDVDTDVIIPARYLAIA-----DWNELAEHAMEDIDTTFAPNV-------KAGEI 55
Query: 134 IIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEEC 193
++AG NFGCGSSREHAP + A G ++A S+ARIFFRN++ G P+ +
Sbjct: 56 MVAGKNFGCGSSREHAPGVIKAKGVPVIIAHSFARIFFRNAINIG--LPVVEIGEQVDRI 113
Query: 194 STGDVVTIEIAESRLINHTTGKEYK----LKPIGDLGPVIDAGGIFAYAR 239
GD + +++++ + N T ++Y+ + I DL AGG+ +A+
Sbjct: 114 DAGDAIGVDLSKGIVYNLTKNEQYQGTELPQFIQDLAA---AGGLVNFAK 160
>gi|421078225|ref|ZP_15539184.1| 3-isopropylmalate dehydratase small subunit [Pelosinus fermentans
JBW45]
gi|392523810|gb|EIW46977.1| 3-isopropylmalate dehydratase small subunit [Pelosinus fermentans
JBW45]
Length = 160
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 92/173 (53%), Gaps = 19/173 (10%)
Query: 71 HGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTK 130
G + G+++DTDQIIP++YL L N +E ++ YT +DEN T
Sbjct: 3 KGKVWKFGNDVDTDQIIPSQYLLL--PNVEEMKQ------------YTFEPLDENFASTV 48
Query: 131 Y--KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEAR 188
II+ G NFG GSSRE AP+ L A G SAVVA+S+ARIFFRN++ G P+
Sbjct: 49 CPGDIIVGGENFGSGSSREQAPLVLKALGISAVVAKSFARIFFRNAINIG--LPVVICKE 106
Query: 189 LCEECSTGDVVTIEIAESRLINHTTGKEY-KLKPIGDLGPVIDAGGIFAYARK 240
+ + D + I++ + + N T + + K + +++AGG+ + K
Sbjct: 107 VYDAVEQKDTLEIDVLKGTIKNVTKDRNFTSTKLPAHVMNILEAGGLIGFLNK 159
>gi|374637010|ref|ZP_09708535.1| 3-isopropylmalate dehydratase, small subunit [Methanotorris
formicicus Mc-S-70]
gi|373557215|gb|EHP83680.1| 3-isopropylmalate dehydratase, small subunit [Methanotorris
formicicus Mc-S-70]
Length = 168
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 94/175 (53%), Gaps = 22/175 (12%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
G +V GD++DTD IIP YL + +L S+ + G+ + R + +
Sbjct: 3 IRGKAHVFGDDVDTDAIIPGPYLKTTDGH-----ELASHCMAGIDEDFPKRVKEGD---- 53
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
+I+AG NFGCGSSRE AP+A+ G AV+AES+ARIF+RN++ G I P+ +
Sbjct: 54 ---VIVAGENFGCGSSREQAPIAIKYCGIRAVIAESFARIFYRNAINIGLI-PI-----V 104
Query: 190 CEECST----GDVVTIEIAESRLINHTTGKEYKLKPIGDLGPVIDAGGIFAYARK 240
C++ + GD + +++ ++I + P+G +++AGG+ Y +
Sbjct: 105 CKDITKYVKEGDAIEVDLENEKIIINDKLTLNCETPMGIAREILEAGGLINYYHR 159
>gi|323141300|ref|ZP_08076196.1| isopropylmalate/citramalate isomerase small subunit
[Phascolarctobacterium succinatutens YIT 12067]
gi|322414257|gb|EFY05080.1| isopropylmalate/citramalate isomerase small subunit
[Phascolarctobacterium succinatutens YIT 12067]
Length = 164
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 90/168 (53%), Gaps = 15/168 (8%)
Query: 75 YVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKII 134
++ GD+IDTD IIPA YL + ++++L +A+ F N Y I
Sbjct: 5 WLYGDHIDTDVIIPARYLNIA-----DFKELAEHAMEDAKENLEINFA-ANVQPGDY--I 56
Query: 135 IAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEECS 194
+AG NFGCGSSREHAPV L G +VA+S+ARIF+RN++ G P+ E+
Sbjct: 57 VAGKNFGCGSSREHAPVVLKVKGIKCIVADSFARIFYRNAINIG--LPVLEIGADVEKIE 114
Query: 195 TGDVVTIEI--AESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYAR 239
GD + +++ E +++N K KP+ + + + D GG+ Y +
Sbjct: 115 PGDEIDVDVNKGEIKILNKNI--TIKTKPLPEFIQHIADCGGLINYIK 160
>gi|260892151|ref|YP_003238248.1| 3-isopropylmalate dehydratase small subunit [Ammonifex degensii
KC4]
gi|260864292|gb|ACX51398.1| 3-isopropylmalate dehydratase, small subunit [Ammonifex degensii
KC4]
Length = 163
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 90/173 (52%), Gaps = 16/173 (9%)
Query: 69 TFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETK 128
G + GD+IDTD IIPA YL N + +L + L ++ E +
Sbjct: 1 MIEGRVFKFGDHIDTDLIIPARYL-----NTTDPAELAKHCLEDADPSFA------REVR 49
Query: 129 TKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEAR 188
+I+AG NFGCGSSREHAP+A+ AAG + VVA+S+ARIF+RN+ G PL E
Sbjct: 50 PG-DVIVAGVNFGCGSSREHAPLAIKAAGVACVVAQSFARIFYRNAFNIG--LPL-LECP 105
Query: 189 LCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
G V +++ R+ TG+ + +PI + +I AGG+ Y K
Sbjct: 106 DAPRIPAGSRVRVDLQSGRIEVLDTGEVFTARPIPPFMQEIIAAGGLIPYVEK 158
>gi|298243280|ref|ZP_06967087.1| 3-isopropylmalate dehydratase, small subunit [Ktedonobacter
racemifer DSM 44963]
gi|297556334|gb|EFH90198.1| 3-isopropylmalate dehydratase, small subunit [Ktedonobacter
racemifer DSM 44963]
Length = 162
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 94/174 (54%), Gaps = 15/174 (8%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + +GDNI+TD IIP Y V ++P +L + L F E +T
Sbjct: 2 GRIWKLGDNINTDVIIPGRYN--VTTDP---AQLARHCL----CEVLPEFAQEVQTG--- 49
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
I++AG NFGCGSSREHAP ++ A G V+A S+ARIF+RN+V G + EA L
Sbjct: 50 DILLAGHNFGCGSSREHAPTSIQANGIKVVIARSFARIFYRNAVNIGLPVLICEEAVLAG 109
Query: 192 ECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARKTGMI 244
E G + + + + N TTG++++ +P+ + ++ A GI Y ++ G +
Sbjct: 110 E--DGQQMDVNLESGLITNLTTGQQFQSEPLDPFVARIVAACGIVNYIQQQGTL 161
>gi|282849436|ref|ZP_06258821.1| 3-isopropylmalate dehydratase small subunit [Veillonella parvula
ATCC 17745]
gi|282581140|gb|EFB86538.1| 3-isopropylmalate dehydratase small subunit [Veillonella parvula
ATCC 17745]
Length = 163
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 89/167 (53%), Gaps = 15/167 (8%)
Query: 74 CYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKI 133
+ GD++DTD IIPA YL + ++ +L +A+ + T+ +I
Sbjct: 8 IWRYGDDVDTDVIIPARYLAIA-----DWNELAEHAMEDIDTTFAPNV-------KAGEI 55
Query: 134 IIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEEC 193
++AG NFGCGSSREHAP + A G ++A S+ARIFFRN++ G P+ +
Sbjct: 56 MVAGKNFGCGSSREHAPGVIKAKGVPVIIAHSFARIFFRNAINIG--LPVVEIGEQVDRI 113
Query: 194 STGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYAR 239
GD + +++++ + N T ++Y+ + + + AGG+ +A+
Sbjct: 114 DAGDAIGVDLSKGIVYNLTKNEQYQGTELPQFIQDIAAAGGLVNFAK 160
>gi|347523295|ref|YP_004780865.1| 3-isopropylmalate dehydratase, small subunit [Pyrolobus fumarii 1A]
gi|343460177|gb|AEM38613.1| 3-isopropylmalate dehydratase, small subunit [Pyrolobus fumarii 1A]
Length = 170
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 91/168 (54%), Gaps = 20/168 (11%)
Query: 78 GDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKIIIAG 137
GD+IDTD IIPA YL E EKL +A+ L + + +K +++AG
Sbjct: 14 GDDIDTDVIIPARYLVYT-----EPEKLAEHAMEPLDPEFPKK-------ASKGVVLVAG 61
Query: 138 GNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEECSTGD 197
NFG GSSRE A +AL AAG A++A+S++RIF+RN++ G P+ L E GD
Sbjct: 62 RNFGMGSSREQAAIALKAAGVKAIIAKSFSRIFYRNAINNG--LPVIVLPELVEAAEEGD 119
Query: 198 VVTIEIAE--SRLINHTTGK--EYKLKPI-GDLGPVIDAGGIFAYARK 240
+ I + E ++LI G+ Y+ P G + ++ GG+ Y R+
Sbjct: 120 EIEINLDEGVAKLIKK-DGRVLTYRFPPFRGVVAEILATGGLLEYMRR 166
>gi|238019776|ref|ZP_04600202.1| hypothetical protein VEIDISOL_01651 [Veillonella dispar ATCC 17748]
gi|237863300|gb|EEP64590.1| hypothetical protein VEIDISOL_01651 [Veillonella dispar ATCC 17748]
Length = 163
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 89/167 (53%), Gaps = 15/167 (8%)
Query: 74 CYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKI 133
+ GD++DTD IIPA YL + ++ +L +A+ + T+ +I
Sbjct: 8 IWRYGDDVDTDVIIPARYLAIA-----DWNELAEHAMEDIDTTFAPNV-------KAGEI 55
Query: 134 IIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEEC 193
++AG NFGCGSSREHAP + A G ++A S+ARIFFRN++ G P+ +
Sbjct: 56 MVAGKNFGCGSSREHAPGVIKAKGVPVIIAHSFARIFFRNAINIG--LPVIEIGEQVDRI 113
Query: 194 STGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYAR 239
GD + +++++ + N T ++Y+ + + + AGG+ +A+
Sbjct: 114 DAGDAIGVDLSKGIVYNLTKNEQYQGTELPQFIQDIAAAGGLVNFAK 160
>gi|303229976|ref|ZP_07316750.1| 3-isopropylmalate dehydratase small subunit [Veillonella atypica
ACS-134-V-Col7a]
gi|302515342|gb|EFL57310.1| 3-isopropylmalate dehydratase small subunit [Veillonella atypica
ACS-134-V-Col7a]
Length = 163
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 89/167 (53%), Gaps = 15/167 (8%)
Query: 74 CYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKI 133
+ GD++DTD IIPA YL + ++ +L +A+ + T+ +I
Sbjct: 8 IWRYGDDVDTDVIIPARYLAIA-----DWNELAEHAMEDIDTTFAPNV-------KAGEI 55
Query: 134 IIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEEC 193
++AG NFGCGSSREHAP + A G ++A S+ARIFFRN++ G P+ +
Sbjct: 56 MVAGKNFGCGSSREHAPGVIKAKGVPVIIAHSFARIFFRNAINIG--LPVVEIGEQVDRI 113
Query: 194 STGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYAR 239
GD + +++++ + N T ++Y+ + + + AGG+ +A+
Sbjct: 114 DAGDAIGVDLSKGIVYNLTKNEQYQGTELPQFIQDIAAAGGLVNFAK 160
>gi|374997181|ref|YP_004972680.1| 3-isopropylmalate dehydratase small subunit [Desulfosporosinus
orientis DSM 765]
gi|357215547|gb|AET70165.1| 3-isopropylmalate dehydratase, small subunit [Desulfosporosinus
orientis DSM 765]
Length = 157
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 87/162 (53%), Gaps = 19/162 (11%)
Query: 78 GDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKIIIAG 137
GDN+DTDQIIPA+YL+L + + A +T F + K II+G
Sbjct: 10 GDNVDTDQIIPAQYLSL--------------STLQQMAPHTFEFYENFTKDFKPGDIISG 55
Query: 138 G-NFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEECSTG 196
NFGCGSSRE AP L G SAV+A+S+ARIF+RN++ G L E +E G
Sbjct: 56 NDNFGCGSSREQAPAVLKERGVSAVIAKSFARIFYRNAINIG---LLLVECENADEIRQG 112
Query: 197 DVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAY 237
DV+ I+ + + N ++ ++ P+ + +++ GGI Y
Sbjct: 113 DVLEIDTHKGVIRNISSNSYLEVTPLPPFMQEILNCGGIVKY 154
>gi|330507890|ref|YP_004384318.1| 3-isopropylmalate dehydratase small subunit 1 [Methanosaeta
concilii GP6]
gi|328928698|gb|AEB68500.1| 3-isopropylmalate dehydratase small subunit 1 [Methanosaeta
concilii GP6]
Length = 159
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 91/175 (52%), Gaps = 30/175 (17%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G ++ GD++DTD IIP +YL + + + G+ + +R K
Sbjct: 4 GKAWIFGDDVDTDVIIPGKYL-----RTRDRHLWAEHVMEGIDPQFASRV-------GKG 51
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
II+AG NFG GSSRE AP+AL AG +AVVA S+ARIF+RN++ G PL +C+
Sbjct: 52 DIIVAGENFGSGSSREQAPLALKEAGVAAVVARSFARIFYRNAINVG--LPLIEAQPVCQ 109
Query: 192 ECSTGDVVTIEI------AESRLINHTTGKEYKLKPIGDLGPVIDAGGIFAYARK 240
E GD+V +++ E R+ T ++ L ++ GG+ A+ R+
Sbjct: 110 E---GDLVEVDLQAGTVRVEDRVYQGTRLPDF-------LMAILKDGGLVAHRRR 154
>gi|154498299|ref|ZP_02036677.1| hypothetical protein BACCAP_02288 [Bacteroides capillosus ATCC
29799]
gi|150272846|gb|EDN00015.1| 3-isopropylmalate dehydratase, small subunit [Pseudoflavonifractor
capillosus ATCC 29799]
Length = 164
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 83/149 (55%), Gaps = 15/149 (10%)
Query: 69 TFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETK 128
T G V+GD++DTDQI+P + + ++LG++A+ GL +D
Sbjct: 3 TIKGRVIVLGDDVDTDQILPGYAMA------EPMDQLGNFAMAGLAG------LDFKSVF 50
Query: 129 TKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEAR 188
II+AG NFGCGSSRE AP+AL G + V+A+ +ARIF RNS+ G P+ A
Sbjct: 51 QPGDIIVAGRNFGCGSSREQAPIALKQVGVALVIAKGFARIFRRNSINIG--MPV-WVAD 107
Query: 189 LCEECSTGDVVTIEIAESRLINHTTGKEY 217
+ +E TGDV+ ++ + + + K++
Sbjct: 108 VADELKTGDVIEADLEKGTVTVNGEVKQF 136
>gi|317122601|ref|YP_004102604.1| 3-isopropylmalate dehydratase small subunit [Thermaerobacter
marianensis DSM 12885]
gi|315592581|gb|ADU51877.1| 3-isopropylmalate dehydratase, small subunit [Thermaerobacter
marianensis DSM 12885]
Length = 174
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 91/170 (53%), Gaps = 15/170 (8%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + GD+++TD IIPA YL ++P E L ++ + L ++
Sbjct: 2 GRVWKYGDDVNTDVIIPARYL--FTTDPAE---LAAHCMEDLDPSFAANV-------RPG 49
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
+I+AG NFGCGSSREHAPVA+ AAG + V+A S+ARIF+RN++ G P+
Sbjct: 50 DVIVAGRNFGCGSSREHAPVAIRAAGVACVIAASFARIFYRNAINVG--LPILECPEAVA 107
Query: 192 ECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
G+ V +++A + TG+ ++ P + ++ GG+ YAR+
Sbjct: 108 ALENGEEVEVDVAAGTIRRVATGETFQAAPFPPFMQEILRCGGLVEYARR 157
>gi|395646276|ref|ZP_10434136.1| 3-isopropylmalate dehydratase small subunit [Methanofollis
liminatans DSM 4140]
gi|395443016|gb|EJG07773.1| 3-isopropylmalate dehydratase small subunit [Methanofollis
liminatans DSM 4140]
Length = 165
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 95/173 (54%), Gaps = 28/173 (16%)
Query: 75 YVVGDNIDTDQIIPAEYLTLVPSNPDEYE--KLGSYALIGLPATYTTRFIDENETKTKYK 132
+ GD+IDTD IIP +LT EY+ KL + G + + E +
Sbjct: 4 WKFGDDIDTDAIIPGRFLT-------EYDPKKLAEHVFEGTRDDFRAG-VQEGD------ 49
Query: 133 IIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEE 192
I++AG NFGCGSSREHAP+AL AG VVAES+ARIF+RN+V TG + PL +C E
Sbjct: 50 ILVAGRNFGCGSSREHAPLALLGAGVRIVVAESFARIFYRNAVNTG-LLPL-----VCPE 103
Query: 193 CST---GDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARKT 241
G+ +++A + + G ++++ + + ++DAGG+ YA+
Sbjct: 104 AGALVEGNEAIVDLAGGHI--ESDGVRHQIETVPPFMQEIVDAGGLVEYAKNM 154
>gi|384172594|ref|YP_005553971.1| 3-isopropylmalate dehydratase small subunit [Arcobacter sp. L]
gi|345472204|dbj|BAK73654.1| 3-isopropylmalate dehydratase small subunit [Arcobacter sp. L]
Length = 166
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/170 (39%), Positives = 93/170 (54%), Gaps = 18/170 (10%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + G NIDTD II A YL N + E L Y + + + +
Sbjct: 6 GKVWNFGANIDTDVIIAARYL-----NSSDPEHLAKYVMEDADPEFPKKL-------QRG 53
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG-EIYPLDSEARLC 190
II+AG NFGCGSSREHAP+AL AAG +AVVA S+ARIF+RN+ G I+ L +
Sbjct: 54 DIIVAGENFGCGSSREHAPIALKAAGVAAVVAPSFARIFYRNAFNMGLPIFELPESLEIK 113
Query: 191 EECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYAR 239
E G+ ++I++ + + N+TT K YK PI + +I GG+ YA+
Sbjct: 114 E----GEEISIDLDKGEITNNTTNKTYKFIPIPPFMQELIATGGLINYAK 159
>gi|261402794|ref|YP_003247018.1| 3-isopropylmalate dehydratase small subunit [Methanocaldococcus
vulcanius M7]
gi|261369787|gb|ACX72536.1| 3-isopropylmalate dehydratase, small subunit [Methanocaldococcus
vulcanius M7]
Length = 163
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 91/173 (52%), Gaps = 17/173 (9%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
G + GD++DTD IIP YL D YE L Y + G+ ++ + + +
Sbjct: 2 IRGRVHKFGDDVDTDAIIPGPYL----RTTDPYE-LARYCMYGIDKEFSKKVKEGD---- 52
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
+I+AG NFGCGSSRE A +A+ G AV+A+S+ARIF+RN++ G ++P+ +
Sbjct: 53 ---VIVAGENFGCGSSREQAVIAIKYCGIKAVIAKSFARIFYRNAINIG-LFPIIANT-- 106
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLK-PIGDLGPVIDAGGIFAYARKT 241
+E D+V I++ + K K K P G ++ A G+ Y +K+
Sbjct: 107 -DELEDNDIVEIDLDNEEIKILNKNKTIKCKTPKGIEKEILKAEGLINYLKKS 158
>gi|427412796|ref|ZP_18902988.1| 3-isopropylmalate dehydratase, small subunit [Veillonella ratti
ACS-216-V-Col6b]
gi|425715612|gb|EKU78598.1| 3-isopropylmalate dehydratase, small subunit [Veillonella ratti
ACS-216-V-Col6b]
Length = 164
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 89/172 (51%), Gaps = 15/172 (8%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
F G + GDN+DTD IIPA YL + + ++L ++A+ + T+
Sbjct: 3 FQGKIWRYGDNVDTDVIIPARYLAIA-----DMDELATHAMEDIDTTFAPNV-------K 50
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
I++AG NFGCGSSREHA + A G ++ S+ARIFFRN++ G P+
Sbjct: 51 PGDIMVAGKNFGCGSSREHASAVIKANGVPCIIVHSFARIFFRNAINIG--LPVIEIGDE 108
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLGPVI-DAGGIFAYARK 240
E+ V ++++ + N TTG+ Y+ + VI AGG+ +A++
Sbjct: 109 VEKIHADHEVGVDMSTGEVHNLTTGEVYQGTALPPFVQVIAKAGGLVNFAKQ 160
>gi|145592258|ref|YP_001154260.1| 3-isopropylmalate dehydratase small subunit [Pyrobaculum
arsenaticum DSM 13514]
gi|145284026|gb|ABP51608.1| 3-isopropylmalate dehydratase, small subunit [Pyrobaculum
arsenaticum DSM 13514]
Length = 160
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/171 (37%), Positives = 92/171 (53%), Gaps = 16/171 (9%)
Query: 71 HGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTK 130
G + GD IDTD IIPA+YL V ++P LG +A+ L + K K
Sbjct: 4 RGRALIYGDKIDTDVIIPAKYL--VYTDP---AVLGQHAMEPLDPDFPK--------KAK 50
Query: 131 YKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLC 190
I++AG FG GSSRE A +AL AG AVVAES+ARIFFRN+V G P+ +
Sbjct: 51 GAILVAGRAFGMGSSREQAALALKGAGVLAVVAESFARIFFRNAVNVG--LPVLQVPGVR 108
Query: 191 EECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLG-PVIDAGGIFAYARK 240
++ + G+ + ++I + TG+ KP+ L ++ AGG+ Y +K
Sbjct: 109 QKVTEGEEIEVDIEAGTVTKVATGEVIVGKPLRGLPLEILKAGGLLNYLKK 159
>gi|379003024|ref|YP_005258696.1| 3-isopropylmalate dehydratase small subunit [Pyrobaculum oguniense
TE7]
gi|375158477|gb|AFA38089.1| 3-isopropylmalate dehydratase, small subunit [Pyrobaculum oguniense
TE7]
Length = 160
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/171 (37%), Positives = 92/171 (53%), Gaps = 16/171 (9%)
Query: 71 HGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTK 130
G + GD IDTD IIPA+YL V ++P LG +A+ L + K K
Sbjct: 4 RGRALIYGDKIDTDVIIPAKYL--VYTDPTV---LGQHAMEPLDPDFPK--------KAK 50
Query: 131 YKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLC 190
I++AG FG GSSRE A +AL AG AVVAES+ARIFFRN+V G P+ +
Sbjct: 51 GAILVAGRAFGMGSSREQAALALKGAGVLAVVAESFARIFFRNAVNVG--LPVLQVPGVR 108
Query: 191 EECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLG-PVIDAGGIFAYARK 240
++ + G+ + ++I + TG+ KP+ L ++ AGG+ Y +K
Sbjct: 109 QKVTEGEEIEVDIEAGTVTKVATGEVIVGKPLRGLPLEILKAGGLLNYLKK 159
>gi|410671555|ref|YP_006923926.1| 3-isopropylmalate dehydratase, small subunit [Methanolobus
psychrophilus R15]
gi|409170683|gb|AFV24558.1| 3-isopropylmalate dehydratase, small subunit [Methanolobus
psychrophilus R15]
Length = 161
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/169 (36%), Positives = 90/169 (53%), Gaps = 20/169 (11%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G ++ G++IDTD IIP +YL + + +A+ G+ + + +K
Sbjct: 7 GRVWIFGNDIDTDVIIPGKYLRTT-----DMQVFADHAMEGIDPEFPRKV-------SKG 54
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
II+AG NFGCGSSRE AP+AL AG S VVA +ARIFFRN++ G PL +
Sbjct: 55 DIIVAGDNFGCGSSREQAPLALKHAGVSCVVARYFARIFFRNAINVG--LPL---IEVDV 109
Query: 192 ECSTGDVVTIEIAESRL-INHTTGKEYKLKPIGDLGPVIDAGGIFAYAR 239
EC+ GD + I + E + +N T KL L ++ GG+ A+ +
Sbjct: 110 ECNEGDEMEINLLEGTVRVNGRTCHGNKLPAF--LLEILTDGGLVAHRK 156
>gi|160895246|ref|ZP_02076018.1| hypothetical protein CLOL250_02806 [Clostridium sp. L2-50]
gi|156863125|gb|EDO56556.1| 3-isopropylmalate dehydratase, small subunit [Clostridium sp.
L2-50]
Length = 161
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 79/148 (53%), Gaps = 14/148 (9%)
Query: 71 HGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTK 130
+G + GDN+DTD IIPA YL S+P E L + + + + N K
Sbjct: 4 YGTVHKYGDNVDTDVIIPARYLN--SSDPAE---LAKHCMEDIDKEFV------NNVKAG 52
Query: 131 YKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLC 190
II+A NFGCGSSREHAP+A+ A+G S V+A+++ARIF+RNS+ G P+
Sbjct: 53 -DIIVAKKNFGCGSSREHAPIAIKASGVSCVIADTFARIFYRNSINIG--LPIIECPEAA 109
Query: 191 EECSTGDVVTIEIAESRLINHTTGKEYK 218
E GD V I+ + + T YK
Sbjct: 110 EGIENGDEVEIDFDSGIIYDKTKDTRYK 137
>gi|332798410|ref|YP_004459909.1| 3-isopropylmalate dehydratase small subunit [Tepidanaerobacter
acetatoxydans Re1]
gi|332696145|gb|AEE90602.1| 3-isopropylmalate dehydratase small subunit [Tepidanaerobacter
acetatoxydans Re1]
Length = 178
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/172 (38%), Positives = 92/172 (53%), Gaps = 16/172 (9%)
Query: 71 HGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTK 130
G + +GDNIDTDQI+P Y VP+ +L +YAL G + D E
Sbjct: 5 KGRVFFLGDNIDTDQILPG-YAMSVPAC-----QLKNYALKG------SSIPDFVEKVRP 52
Query: 131 YKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEA--R 188
+II G NFGCGSSRE APVAL AG AV+A S+A IF +NS+ G + + SE
Sbjct: 53 GDVIIGGKNFGCGSSREQAPVALKDAGVGAVIAASFAMIFRKNSINIG-LPVITSECIDL 111
Query: 189 LCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLG-PVIDAGGIFAYAR 239
+ E GD V ++I L++ +G+ Y+LK + + + AGG+ R
Sbjct: 112 MKREIQEGDQVEVDIESGILLHIDSGRVYELKKLSEPALATLRAGGLINRVR 163
>gi|284047537|ref|YP_003397876.1| 3-isopropylmalate dehydratase small subunit [Acidaminococcus
fermentans DSM 20731]
gi|283951758|gb|ADB46561.1| 3-isopropylmalate dehydratase, small subunit [Acidaminococcus
fermentans DSM 20731]
Length = 160
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 89/165 (53%), Gaps = 19/165 (11%)
Query: 78 GDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKIIIAG 137
GD++DTD IIPA YL N ++++L +A+ + T+ II+AG
Sbjct: 8 GDHVDTDVIIPARYL-----NISDFKELSEHAMEDIDTTFAPNV-------KPGDIIVAG 55
Query: 138 GNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEECSTGD 197
NFGCGSSREHAP+ + G + ++AES+ARIF+RN++ G P+ ++ GD
Sbjct: 56 RNFGCGSSREHAPIVIQQKGVACIIAESFARIFYRNAINIG--LPVLEIGEEAKKIQAGD 113
Query: 198 VVTIEI--AESRLINHTTGKEYKLKPI-GDLGPVIDAGGIFAYAR 239
V ++ E R++N G K P+ + + +AGG+ Y +
Sbjct: 114 QVEVDFDKGEIRVVN--KGLVIKTHPLPAFVRKIAEAGGLINYVK 156
>gi|20092549|ref|NP_618624.1| 3-isopropylmalate dehydratase [Methanosarcina acetivorans C2A]
gi|23396647|sp|Q8TJM9.1|LEUD1_METAC RecName: Full=3-isopropylmalate dehydratase small subunit 1;
AltName: Full=Alpha-IPM isomerase 1; Short=IPMI 1;
AltName: Full=Isopropylmalate isomerase 1
gi|19917821|gb|AAM07104.1| 3-isopropylmalate dehydratase [Methanosarcina acetivorans C2A]
Length = 166
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/137 (38%), Positives = 79/137 (57%), Gaps = 17/137 (12%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + GD+IDTD IIP +YL + + ++A+ G+ +T +
Sbjct: 8 GRVWKFGDDIDTDVIIPGKYL-----RTKDMQIFAAHAMEGIAPEFTKK-------AKPG 55
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
II+AG NFGCGSSRE AP+A+ AG + VVA+S+ARIFFRN++ G PL EA +
Sbjct: 56 DIIVAGENFGCGSSREQAPLAIKHAGIACVVAKSFARIFFRNAINVG--LPL-MEADI-- 110
Query: 192 ECSTGDVVTIEIAESRL 208
EC GD + +++ + +
Sbjct: 111 ECQEGDEIEVDLLKGEV 127
>gi|303230900|ref|ZP_07317644.1| 3-isopropylmalate dehydratase small subunit [Veillonella atypica
ACS-049-V-Sch6]
gi|302514413|gb|EFL56411.1| 3-isopropylmalate dehydratase small subunit [Veillonella atypica
ACS-049-V-Sch6]
Length = 163
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 89/167 (53%), Gaps = 15/167 (8%)
Query: 74 CYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKI 133
+ GD++DTD IIPA YL + ++ +L +A+ + T+ +I
Sbjct: 8 IWRYGDDVDTDVIIPARYLAIA-----DWNELAEHAMEDIDTTFAPNV-------KAGEI 55
Query: 134 IIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEEC 193
++AG NFGCGSSREHAP + A G ++A S+ARIFFRN++ G P+ +
Sbjct: 56 MVAGKNFGCGSSREHAPGVIKAKGVPVIIAHSFARIFFRNAINIG--LPVVEIGEQVDRI 113
Query: 194 STGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYAR 239
GD + +++++ + N T ++Y+ + + + AGG+ +A+
Sbjct: 114 DAGDEIGVDLSKGIVYNLTKNEQYQGTELPQFIQDIAAAGGLVNFAK 160
>gi|91773540|ref|YP_566232.1| 3-isopropylmalate dehydratase, small subunit [Methanococcoides
burtonii DSM 6242]
gi|91712555|gb|ABE52482.1| 3-Isopropylmalate dehydratase small subunit and homoaconitase small
subunit - dual specificity [Methanococcoides burtonii
DSM 6242]
Length = 163
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 91/169 (53%), Gaps = 20/169 (11%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G +V GD++DTD IIP +YL + + +A+ G+ ++ + K
Sbjct: 7 GKAWVFGDDVDTDVIIPGKYLRTT-----DMQVFADHAMEGIDPDFSKKV-------HKG 54
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
+++ G NFGCGSSRE A +AL AG S V+A+ + RIFFRN++ G PL EA +
Sbjct: 55 DVVVGGSNFGCGSSREQAALALKYAGVSCVIAKFFGRIFFRNAINVG--LPL-MEADI-- 109
Query: 192 ECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYAR 239
EC+ GD V +++ E + GK +K + D L ++ GG+ + +
Sbjct: 110 ECNEGDTVEVDLQEGLVT--INGKVFKGNKLPDFLLEILTDGGLVEHRK 156
>gi|257458801|ref|ZP_05623924.1| 3-isopropylmalate dehydratase small subunit [Campylobacter gracilis
RM3268]
gi|257443789|gb|EEV18909.1| 3-isopropylmalate dehydratase small subunit [Campylobacter gracilis
RM3268]
Length = 160
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/108 (46%), Positives = 70/108 (64%), Gaps = 4/108 (3%)
Query: 133 IIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEE 192
II+AG NFGCGSSREHAP+AL AAG S V+A+++ARIF+RNS TG L E ++
Sbjct: 51 IIVAGKNFGCGSSREHAPMALKAAGISCVIAKNFARIFYRNSFNTG---FLILECDETDK 107
Query: 193 CSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYAR 239
+ GD ++I++ + N T EYK I + + ++DAGG YA+
Sbjct: 108 IAQGDELSIDLKGGVIKNLTQKTEYKFAAIPEFMQKLLDAGGAINYAK 155
>gi|269839779|ref|YP_003324472.1| 3-isopropylmalate dehydratase small subunit [Thermobaculum terrenum
ATCC BAA-798]
gi|269791509|gb|ACZ43649.1| 3-isopropylmalate dehydratase, small subunit [Thermobaculum
terrenum ATCC BAA-798]
Length = 159
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 89/167 (53%), Gaps = 16/167 (9%)
Query: 74 CYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKI 133
+ VGDN+ TD+IIP Y + ++L A I Y E +
Sbjct: 4 VWKVGDNVSTDEIIPGRYNVTT-----DRQQLAKAAFIEYRPDYA-------ENVRPGDV 51
Query: 134 IIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEEC 193
I+AG NFG GSSREHAP+A+ A+G AV+A S+ARIFFRN++ G P+ L
Sbjct: 52 IVAGKNFGMGSSREHAPIAIQASGAKAVIARSFARIFFRNAINIG--LPILVCDELHGAV 109
Query: 194 STGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYAR 239
GD + +++A + I G+ ++++P+ + + ++ AGGI + +
Sbjct: 110 EDGDEIDVDLATGQ-ITLADGRTFQVEPLPEFVLEIVRAGGIIPFVQ 155
>gi|123142345|sp|Q0QLE1.1|DMDB_EUBBA RecName: Full=2,3-dimethylmalate dehydratase small subunit
gi|86278277|gb|ABC88409.1| 2,3-dimethylmalate dehydratase small subunit [Eubacterium barkeri]
Length = 163
Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 92/171 (53%), Gaps = 15/171 (8%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + GDN+DTD IIPA +L S+P E L ++ + + A ++++
Sbjct: 5 GSVFRYGDNVDTDVIIPARFLN--TSDPLE---LAAHCMEDIDADFSSKV-------NAG 52
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
II+A NFGCGSSREHAP+++ A+G S V+A S+ARIF+RN++ G P+
Sbjct: 53 DIIVADDNFGCGSSREHAPISIKASGVSCVIANSFARIFYRNAINIG--LPILECPEAVA 110
Query: 192 ECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARKT 241
GD V ++ + + T G+ ++ + + + +I AGG+ Y T
Sbjct: 111 VIEAGDEVEVDFDSGVITDVTKGQSFQGQAFPEFMQTLIAAGGLVNYINAT 161
>gi|309792065|ref|ZP_07686539.1| hypothetical protein OSCT_2490 [Oscillochloris trichoides DG-6]
gi|308225872|gb|EFO79626.1| hypothetical protein OSCT_2490 [Oscillochloris trichoides DG6]
Length = 171
Score = 90.1 bits (222), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/169 (36%), Positives = 89/169 (52%), Gaps = 15/169 (8%)
Query: 75 YVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKII 134
++ G +I+TDQI+P Y ++ N D+ L Y + + + T II
Sbjct: 10 WIFGQDINTDQIVPGRYAPIMLKNEDD---LRLYPFVEHRPEFAS-------TVRPGDII 59
Query: 135 IAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEECS 194
+AG NFGCGSSRE+AP+AL G A++A +ARIFFRN++ G P + A L + +
Sbjct: 60 VAGNNFGCGSSREYAPLALKMVGVGAIIAPLFARIFFRNALNLG--IPCFT-ADLTSQLA 116
Query: 195 TGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARKTG 242
G+ V + + E R I G+E L P L V AGGI + R+ G
Sbjct: 117 DGEQVELHLEEGR-ITCADGRELALPPPPTFLREVWAAGGIVPFYRQHG 164
>gi|448331566|ref|ZP_21520829.1| 3-isopropylmalate dehydratase small subunit [Natrinema versiforme
JCM 10478]
gi|445609132|gb|ELY62941.1| 3-isopropylmalate dehydratase small subunit [Natrinema versiforme
JCM 10478]
Length = 167
Score = 90.1 bits (222), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/173 (38%), Positives = 96/173 (55%), Gaps = 22/173 (12%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G +V GD+IDTDQI P+ +L V S+PDE LG +A L F D E
Sbjct: 7 GRAWVFGDDIDTDQITPSRFL--VSSDPDE---LGEHAFNDL----RPEFADGVEPG--- 54
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
++AG NFG GSSREHAP++L AG + VVA+S+ARIFFRN++ G P+ +C
Sbjct: 55 DFVVAGENFGSGSSREHAPLSLVGAGVAGVVAQSFARIFFRNAINLG--LPV----LICP 108
Query: 192 ---ECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
E G ++I++ E + +H Y +P+ L ++D GG+ Y R+
Sbjct: 109 GVGEIDDGTEISIDVDEGFVYDHDEEIRYDAEPLPPFLQDLVDQGGLKPYTRR 161
>gi|375306925|ref|ZP_09772217.1| 3-isopropylmalate dehydratase small subunit [Paenibacillus sp.
Aloe-11]
gi|375081011|gb|EHS59227.1| 3-isopropylmalate dehydratase small subunit [Paenibacillus sp.
Aloe-11]
Length = 165
Score = 90.1 bits (222), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 94/166 (56%), Gaps = 18/166 (10%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
F G + + D++DTD II + ++ + ++GS+ L L + + E K
Sbjct: 5 FSGKVWKLPDDVDTDTIIAGRHGVIL-----DKREMGSHCLETLRPEFAS------EVKP 53
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
I++AG NFGCGSSRE A A+ G +VA+S+ARIFFRN++ G + ++SE +
Sbjct: 54 G-DILVAGKNFGCGSSREMAAEAINVHGVECIVAKSFARIFFRNAINNG-MLLIESE-EI 110
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGI 234
E C GD++T+E+ + +N GKE+++ + D L +I GG+
Sbjct: 111 PESCEEGDILTVEVNQKVTVN---GKEFEISKLPDNLFAIIQDGGL 153
>gi|73667793|ref|YP_303808.1| 3-isopropylmalate dehydratase small subunit [Methanosarcina barkeri
str. Fusaro]
gi|72394955|gb|AAZ69228.1| 3-isopropylmalate dehydratase, small subunit [Methanosarcina
barkeri str. Fusaro]
Length = 165
Score = 90.1 bits (222), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 78/137 (56%), Gaps = 17/137 (12%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + GD+IDTD IIP +YL + + ++A+ G+ + +
Sbjct: 7 GRIWKFGDDIDTDVIIPGKYL-----RTKDMQVFAAHAMEGIDPEFAKKV-------KPG 54
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
+I+AG NFGCGSSRE AP+AL AG + +VA+S+ARIFFRN++ G PL EA +
Sbjct: 55 DVIVAGSNFGCGSSREQAPLALKHAGIACIVAKSFARIFFRNAINVG--LPL-IEADI-- 109
Query: 192 ECSTGDVVTIEIAESRL 208
EC GD V +++ + +
Sbjct: 110 ECQEGDEVRVDLLKGEV 126
>gi|350272786|ref|YP_004884094.1| 3-isopropylmalate dehydratase small subunit [Oscillibacter
valericigenes Sjm18-20]
gi|348597628|dbj|BAL01589.1| 3-isopropylmalate dehydratase small subunit [Oscillibacter
valericigenes Sjm18-20]
Length = 166
Score = 90.1 bits (222), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 94/170 (55%), Gaps = 15/170 (8%)
Query: 71 HGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTK 130
HG + GD++DTD IIPA YL +P E L S+ + + + +
Sbjct: 4 HGTAHKYGDHVDTDVIIPARYLA--SQDPKE---LASHCMEDIDPDFARKI-------RP 51
Query: 131 YKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLC 190
+++AG NFGCGSSREHAP+A+ A+ + V+A+++ARIF+RN++ G + L+ A
Sbjct: 52 GDLMVAGWNFGCGSSREHAPIAIRASAITCVIAKTFARIFYRNAINIG-LAILECPA-AS 109
Query: 191 EECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYAR 239
+ + GD V ++ + N T G++Y+ +P + +I GG+ A R
Sbjct: 110 DGIADGDEVEVDFDTGVIRNLTKGEQYQAEPFPPFIRDMIRQGGLMATLR 159
>gi|333909943|ref|YP_004483676.1| 3-isopropylmalate dehydratase small subunit [Methanotorris igneus
Kol 5]
gi|333750532|gb|AEF95611.1| 3-isopropylmalate dehydratase small subunit [Methanotorris igneus
Kol 5]
Length = 169
Score = 90.1 bits (222), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 93/169 (55%), Gaps = 14/169 (8%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G +V G+++DTD IIP YL + + +L S+ + G+ + + + +
Sbjct: 5 GKAHVFGNDVDTDAIIPGPYLKTMDGH-----ELASHCMAGIDEDFPKKVKEGD------ 53
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
+I+AG NFGCGSSRE AP+A+ G AV+AES+ARIF+RN++ G I P+ + + +
Sbjct: 54 -VIVAGENFGCGSSREQAPIAIKYCGIKAVIAESFARIFYRNAINIGLI-PIVCKG-ITK 110
Query: 192 ECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLGPVIDAGGIFAYARK 240
GDV+ +++ ++I + P G +++AGG+ Y +
Sbjct: 111 HVKDGDVIEVDLENEKIIINDKITLNCETPKGIEREILEAGGLINYYHR 159
>gi|438001356|ref|YP_007271099.1| 3-isopropylmalate dehydratase small subunit [Tepidanaerobacter
acetatoxydans Re1]
gi|432178150|emb|CCP25123.1| 3-isopropylmalate dehydratase small subunit [Tepidanaerobacter
acetatoxydans Re1]
Length = 167
Score = 90.1 bits (222), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/152 (40%), Positives = 84/152 (55%), Gaps = 15/152 (9%)
Query: 71 HGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTK 130
G + +GDNIDTDQI+P Y VP+ +L +YAL G + D E
Sbjct: 5 KGRVFFLGDNIDTDQILPG-YAMSVPAC-----QLKNYALKG------SSIPDFVEKVRP 52
Query: 131 YKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEA--R 188
+II G NFGCGSSRE APVAL AG AV+A S+A IF +NS+ G + + SE
Sbjct: 53 GDVIIGGKNFGCGSSREQAPVALKDAGVGAVIAASFAMIFRKNSINIG-LPVITSECIDL 111
Query: 189 LCEECSTGDVVTIEIAESRLINHTTGKEYKLK 220
+ E GD V ++I L++ +G+ Y+LK
Sbjct: 112 MKREIQEGDQVEVDIESGILLHIDSGRVYELK 143
>gi|429764701|ref|ZP_19297011.1| 3-isopropylmalate dehydratase, small subunit [Clostridium celatum
DSM 1785]
gi|429187625|gb|EKY28535.1| 3-isopropylmalate dehydratase, small subunit [Clostridium celatum
DSM 1785]
Length = 163
Score = 90.1 bits (222), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 93/179 (51%), Gaps = 22/179 (12%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + GDN+DTD IIPA YL S+P E L S+ + + ++ K K
Sbjct: 5 GKVFKYGDNVDTDVIIPARYLN--TSDPKE---LASHCMEDIDLEFSK--------KVKV 51
Query: 132 -KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLC 190
II+A NFGCGSSREHAP+A+ +G S V+A ++ARIF+RN++ G P+
Sbjct: 52 GDIIVANKNFGCGSSREHAPIAIKESGVSCVIASTFARIFYRNAINIG--LPILECDEAV 109
Query: 191 EECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARKTGMIASRN 248
+ GD + + + N T ++Y+ + + + +I + G+ Y + A+RN
Sbjct: 110 KNIEAGDELEVNFDNGVIKNLTKNEKYQSEAFPEFMQKIIKSNGLVGYIK-----AARN 163
>gi|296110100|ref|YP_003617049.1| 3-isopropylmalate dehydratase, small subunit [methanocaldococcus
infernus ME]
gi|295434914|gb|ADG14085.1| 3-isopropylmalate dehydratase, small subunit [Methanocaldococcus
infernus ME]
Length = 166
Score = 89.7 bits (221), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 91/171 (53%), Gaps = 15/171 (8%)
Query: 71 HGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTK 130
G + GD+IDTD IIP YL +P EY K Y + GL ++ + + E +
Sbjct: 4 KGRVWKFGDDIDTDLIIPGPYLR--ARDPREYAK---YCMYGLDKEFSKK-VKEGD---- 53
Query: 131 YKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLC 190
II+AG NFGCGSSRE A +A+ G VVA+S+ARIF+RN++ +YP+ +
Sbjct: 54 --IIVAGENFGCGSSREQAVLAIKYLGIPVVVAKSFARIFYRNAINNA-LYPVIANTDE- 109
Query: 191 EECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLGPVIDAGGIFAYARKT 241
E + + E R+IN E K+ P G ++DAGG+ Y +K
Sbjct: 110 IEEGDIIEIDLNKEEIRVINKGIKIECKV-PKGVEKEILDAGGLINYFKKV 159
>gi|289595806|ref|YP_003482502.1| 3-isopropylmalate dehydratase, small subunit [Aciduliprofundum
boonei T469]
gi|289533593|gb|ADD07940.1| 3-isopropylmalate dehydratase, small subunit [Aciduliprofundum
boonei T469]
Length = 163
Score = 89.7 bits (221), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 59/171 (34%), Positives = 88/171 (51%), Gaps = 13/171 (7%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + GD+++TD I P +Y + S+ E++ S+AL L +
Sbjct: 2 GRVWKYGDDVNTDVIFPGKYTYKIMSD----EEMASHALEDLDPEFAKNV-------KPG 50
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
+I+AG N+G GSSRE A L AAG A++AES+ARI++RN + G + + + E
Sbjct: 51 DVIVAGKNWGYGSSREQAVKCLKAAGIKAIIAESFARIYYRNCINLG-LPAITLKREEIE 109
Query: 192 ECSTGDVVTIEIAESRLINHTTGKEYKLKPI-GDLGPVIDAGGIFAYARKT 241
+ GD V ++I +IN T G E P G + +I AGGI Y RK
Sbjct: 110 KFEAGDKVEVDIENGIIINKTKGFEVHFPPFEGYVMDIIKAGGIIEYIRKN 160
>gi|392407629|ref|YP_006444237.1| 3-isopropylmalate dehydratase small subunit [Anaerobaculum mobile
DSM 13181]
gi|390620765|gb|AFM21912.1| 3-isopropylmalate dehydratase, small subunit [Anaerobaculum mobile
DSM 13181]
Length = 168
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 93/178 (52%), Gaps = 25/178 (14%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
G + GD+I+TD II +Y + N A + ID N +K
Sbjct: 6 LKGRAHKFGDDINTDYIIAGKYTKTLNLND--------------LALHLFEDIDPNFSKK 51
Query: 130 KY--KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEA 187
+++AG NFGCGSSRE AP+A+ +G +AV+A S+ARIFFRN++ G P A
Sbjct: 52 MKGGDLVVAGKNFGCGSSREQAPIAIKESGIAAVLAHSFARIFFRNAINIG--LP----A 105
Query: 188 RLC--EECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARKTG 242
+C +E GD + +++ ++N T K+ ++P+ D + ++ GG+ Y +K G
Sbjct: 106 LVCNTDEIDDGDELEVDLENGLVLNITKDKKIPMEPMPDIMKHILREGGLVPYLKKYG 163
>gi|374993174|ref|YP_004968673.1| 3-isopropylmalate dehydratase small subunit [Desulfosporosinus
orientis DSM 765]
gi|357211540|gb|AET66158.1| 3-isopropylmalate dehydratase, small subunit [Desulfosporosinus
orientis DSM 765]
Length = 168
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 91/177 (51%), Gaps = 18/177 (10%)
Query: 67 TATFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENE 126
+ HG + +G N+DTDQI P Y P+ +K YAL G + D
Sbjct: 4 NSKIHGRVWNLGGNVDTDQIFPG-YAMAAPA-----DKFKDYALAG------SEIPDFAG 51
Query: 127 TKTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG-EIYPLDS 185
II+AG NFGCGSSRE APVAL AG V+A+S+ARIF RN++ G + D
Sbjct: 52 KVQAGDIIVAGENFGCGSSREQAPVALKEAGVGLVIAKSFARIFRRNAINIGLPVLVCDM 111
Query: 186 EARLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARKT 241
E ++ G + I++ + ++ +G++ + + D + ++AGG+ A RK
Sbjct: 112 EQKV----ENGQELEIDLTAAEIMICASGEKVRAARLADNVLQTLEAGGLIAKVRKQ 164
>gi|386003070|ref|YP_005921369.1| 3-isopropylmalate dehydratase small subunit [Methanosaeta
harundinacea 6Ac]
gi|312183641|gb|ADQ42390.1| 3-isopropylmalate dehydratase small subunit [Methanosaeta
harundinacea 6Ac]
gi|357211126|gb|AET65746.1| 3-isopropylmalate dehydratase, small subunit [Methanosaeta
harundinacea 6Ac]
Length = 160
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/174 (35%), Positives = 93/174 (53%), Gaps = 22/174 (12%)
Query: 69 TFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETK 128
G +V GD++DTD IIP YL + +L +A+ GL + +
Sbjct: 1 MIRGKAWVYGDDVDTDVIIPGPYL-----RTKDVRELACHAMEGLDPEFAKQV------- 48
Query: 129 TKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEAR 188
+I+AG NFGCGSSRE AP+AL AG + VVA+S+ARIF+RN++ G P+ A
Sbjct: 49 RPGDVIVAGKNFGCGSSREQAPLALREAGVACVVAKSFARIFYRNAINVG--LPVVEAAV 106
Query: 189 LCEECSTGDVVTIEIAESRLINHTTGKEYKL-KPIGD-LGPVIDAGGIFAYARK 240
+ + G+VV +++A ++ T G L I D L ++ GG+ A+ RK
Sbjct: 107 VARQ---GEVVEVDLAAGKV---TVGGRTSLGTKIPDFLLEILQDGGLVAHRRK 154
>gi|256810021|ref|YP_003127390.1| 3-isopropylmalate dehydratase small subunit [Methanocaldococcus
fervens AG86]
gi|256793221|gb|ACV23890.1| 3-isopropylmalate dehydratase, small subunit [Methanocaldococcus
fervens AG86]
Length = 163
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 94/177 (53%), Gaps = 17/177 (9%)
Query: 69 TFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETK 128
G + GD++DTD IIP YL D YE L S+ + G+ + + + +
Sbjct: 2 VIKGRVHKFGDDVDTDAIIPGPYL----RTTDPYE-LASHCMAGIDEDFPKKVKEGD--- 53
Query: 129 TKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEAR 188
+I+AG NFGCGSSRE A +A+ G AV+A+S+ARIF+RN++ G I P+ +
Sbjct: 54 ----VIVAGENFGCGSSREQAVIAIKYCGIKAVIAKSFARIFYRNAINVGLI-PIIANT- 107
Query: 189 LCEECSTGDVVTIEIAESRLINHTTGKEYKLK-PIGDLGPVIDAGGIFAYARKTGMI 244
+E GDVV I++ + + K K + P G +++AGG+ Y ++ I
Sbjct: 108 --DEIEDGDVVEIDLDKEEIKIIDKDKTIKCEAPKGLEREILNAGGLVNYLKRKTKI 162
>gi|220929044|ref|YP_002505953.1| 3-isopropylmalate dehydratase small subunit [Clostridium
cellulolyticum H10]
gi|219999372|gb|ACL75973.1| 3-isopropylmalate dehydratase, small subunit [Clostridium
cellulolyticum H10]
Length = 166
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 88/171 (51%), Gaps = 16/171 (9%)
Query: 71 HGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTK 130
+G + DNIDTD IIPA Y + ++L + + + + D +
Sbjct: 4 NGYVHKFDDNIDTDVIIPARYCVTLNK-----KELARHCMHDIKEEFYKNVRDSD----- 53
Query: 131 YKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLC 190
II+AG NFGCGSSRE AP+A+ A G ++A+S+ARIFFRN++ G + +D +L
Sbjct: 54 --IIVAGENFGCGSSREVAPIAIQACGIKCIIAKSFARIFFRNAINIGLMLVIDH--KLY 109
Query: 191 EECSTGDVVTIEIAESRLIN--HTTGKEYKLKPIGDLGPVIDAGGIFAYAR 239
+ STGD + ++ ++N + ++ + + ++ G+ Y +
Sbjct: 110 DLVSTGDNIEVDFENKFILNKSNNINVDFNMSNSNIIDEIVKHKGLINYIK 160
>gi|358064131|ref|ZP_09150716.1| 3-isopropylmalate dehydratase small subunit [Clostridium hathewayi
WAL-18680]
gi|356697647|gb|EHI59222.1| 3-isopropylmalate dehydratase small subunit [Clostridium hathewayi
WAL-18680]
Length = 163
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/173 (41%), Positives = 96/173 (55%), Gaps = 18/173 (10%)
Query: 69 TFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETK 128
TF G +V+GD+IDTD IIP EYL L E + Y L + I E +
Sbjct: 3 TFTGRVWVLGDDIDTDIIIPTEYLAL-----KTIEDMKQYGFSPLRPELAGQ-IKEGD-- 54
Query: 129 TKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEAR 188
II+AG NFGCGSSRE AP + A G V+A+SYARIFFRNS+ G + L +
Sbjct: 55 ----IIVAGKNFGCGSSREQAPEIIKALGIRCVIAKSYARIFFRNSINNGLL--LIEQPD 108
Query: 189 LCEECSTGDVVTIEIAESRLINHTTGKEYKLKPI-GDLGPVIDAGGIFAYARK 240
L + S GD +T+E+ + + H GKEY + + +L +I+AGG+ RK
Sbjct: 109 LRDAVSEGDEITVEV--NHFVKH-QGKEYPIASLPENLVDIINAGGLVKAMRK 158
>gi|357038655|ref|ZP_09100452.1| 3-isopropylmalate dehydratase small subunit [Desulfotomaculum
gibsoniae DSM 7213]
gi|355359447|gb|EHG07209.1| 3-isopropylmalate dehydratase small subunit [Desulfotomaculum
gibsoniae DSM 7213]
Length = 164
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 87/167 (52%), Gaps = 21/167 (12%)
Query: 78 GDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKIIIAG 137
G NIDTD IIPA Y +N + +LG + + + ++ R I++A
Sbjct: 10 GANIDTDAIIPARY-----ANLSDAVELGKHCMENIEPGFSGRV-------KPGDILVAE 57
Query: 138 GNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEECSTGD 197
NFGCGSSRE AP+A+ AG S V+A S+ARIFFRN++ G PL ++ GD
Sbjct: 58 SNFGCGSSREIAPMAIMGAGISCVIARSFARIFFRNAINIG--LPLLDCPEAIDKTKEGD 115
Query: 198 VVTIEIAESRLINHTTGKEYKLKP----IGDLGPVIDAGGIFAYARK 240
+ ++++ + N T G +K P I DL I AGG+ Y K
Sbjct: 116 YLEVDLSSGLIKNVTAGLLFKAVPFPSFIRDL---ISAGGLLEYTLK 159
>gi|386856288|ref|YP_006260465.1| 3-isopropylmalate dehydratase small subunit [Deinococcus gobiensis
I-0]
gi|379999817|gb|AFD25007.1| 3-isopropylmalate dehydratase small subunit 2 [Deinococcus
gobiensis I-0]
Length = 201
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 84/162 (51%), Gaps = 15/162 (9%)
Query: 79 DNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKIIIAGG 138
D+I+TD+IIPA +LT D +L YA+ + R K II+AG
Sbjct: 10 DHINTDEIIPARHLTT-----DVEAELAPYAMEDYDKGFVKRV-------QKGDIIVAGA 57
Query: 139 NFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEECSTGDV 198
+FGCGSSREHA AL AG +AV+A ++ARI++RNS+ G L+ E + E GD
Sbjct: 58 DFGCGSSREHAVWALRGAGVAAVIAPNFARIYYRNSINNG-FLALECEG-IVEAFQDGDP 115
Query: 199 VTIEIAESRLINHTTGKEYKLKPIGDLG-PVIDAGGIFAYAR 239
+++A + N TG+ P+ V AGG Y +
Sbjct: 116 ADLDLAGGTITNTRTGQSLTFVPVPQFALDVQRAGGWLEYMK 157
>gi|429217745|ref|YP_007179389.1| 3-isopropylmalate dehydratase small subunit [Deinococcus
peraridilitoris DSM 19664]
gi|429128608|gb|AFZ65623.1| 3-isopropylmalate dehydratase, small subunit [Deinococcus
peraridilitoris DSM 19664]
Length = 170
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 86/164 (52%), Gaps = 15/164 (9%)
Query: 79 DNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKIIIAGG 138
D+I+TD+IIPA +LT D +L +A+ Y F+ E+ I++AG
Sbjct: 10 DHINTDEIIPARHLT-----TDVEAELAKFAM----EDYDKDFVRRVESG---DIVVAGA 57
Query: 139 NFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEECSTGDV 198
+FGCGSSREHA AL AG AV+A ++ARIF+RN++ G L+ E R+ + GD
Sbjct: 58 DFGCGSSREHAVWALRGAGVGAVIAPNFARIFYRNAINNG-FLALECE-RVTQAFQDGDE 115
Query: 199 VTIEIAESRLINHTTGKEYKLKPIGDLG-PVIDAGGIFAYARKT 241
+++ + N TG+ P+ V AGG Y R+
Sbjct: 116 ADLDLQGGTITNKRTGEALTFVPVPQFALDVQKAGGWLEYMREQ 159
>gi|379011258|ref|YP_005269070.1| 3-isopropylmalate dehydratase small subunit [Acetobacterium woodii
DSM 1030]
gi|375302047|gb|AFA48181.1| 3-isopropylmalate dehydratase small subunit LeuD2 [Acetobacterium
woodii DSM 1030]
Length = 162
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 82/164 (50%), Gaps = 15/164 (9%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + G N+DTD IIPA YL S+P E L + + + A +
Sbjct: 5 GKVFRYGSNVDTDVIIPARYLN--TSDPKE---LAQHCMEDIDADFVKNV-------KAG 52
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
II+A NFGCGSSREHAP+A+ AG S V+A +ARIF+RN++ G P+
Sbjct: 53 DIIVAEKNFGCGSSREHAPIAIKTAGVSCVIAADFARIFYRNAINIG--LPILECPEAVA 110
Query: 192 ECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGI 234
+ GD V + + N T K Y+ + D + +I AGG+
Sbjct: 111 DLKAGDEVEVVFETGVITNITENKTYQAQAFPDFMQKIIAAGGL 154
>gi|21226747|ref|NP_632669.1| 3-isopropylmalate dehydratase [Methanosarcina mazei Go1]
gi|23396644|sp|Q8PZ49.1|LEUD1_METMA RecName: Full=3-isopropylmalate dehydratase small subunit 1;
AltName: Full=Alpha-IPM isomerase 1; Short=IPMI 1;
AltName: Full=Isopropylmalate isomerase 1
gi|20905038|gb|AAM30341.1| 3-isopropylmalate dehydratase [Methanosarcina mazei Go1]
Length = 169
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 96/172 (55%), Gaps = 21/172 (12%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + G++IDTD IIP +YL + + ++A+ G+ ++ +
Sbjct: 8 GRVWKFGNDIDTDVIIPGKYL-----RTKDMQVFAAHAMEGIDPGFSKK-------AKPG 55
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
II+AG NFGCGSSRE AP+AL AG + +VA+S+ARIFFRN++ G PL EA +
Sbjct: 56 DIIVAGDNFGCGSSREQAPLALKHAGIACIVAKSFARIFFRNAINIG--LPL-MEADI-- 110
Query: 192 ECSTGDVVTIEIAESRLINHTTGKE-YKLKPIGD-LGPVIDAGGIFAYARKT 241
EC GD + +++ + + +GK ++ + D L ++ GG+ A+ +K
Sbjct: 111 ECEEGDQIEVDLLKGEV--KVSGKGVFRGNKLPDFLLDMLTDGGLVAHRKKV 160
>gi|282164130|ref|YP_003356515.1| 3-isopropylmalate dehydratase small subunit [Methanocella
paludicola SANAE]
gi|282156444|dbj|BAI61532.1| 3-isopropylmalate dehydratase small subunit [Methanocella
paludicola SANAE]
Length = 170
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 86/159 (54%), Gaps = 12/159 (7%)
Query: 82 DTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKIIIAGGNFG 141
+TD++I +Y + + +KL +A + T+ + K I+IA NFG
Sbjct: 19 NTDEVISGKY----KYDELDLKKLAVHAFESIDPTFYA-----DSQKVNDPILIAANNFG 69
Query: 142 CGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEECSTGDVVTI 201
CGSSRE AP + A G S ++AESYARIF+RNS G PL + + GD + +
Sbjct: 70 CGSSREQAPQVILACGVSCIIAESYARIFYRNSFNIG--LPLIECKGIYKAAKQGDELEV 127
Query: 202 EIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYAR 239
+ + + N TTGK+ +KPI + + +++AGG+ Y +
Sbjct: 128 DFKNNVIKNLTTGKKLPMKPIPEFMQQLLEAGGLMPYLK 166
>gi|452209233|ref|YP_007489347.1| Coenzyme B synthesis from 2-oxoglutarate small subunit
[Methanosarcina mazei Tuc01]
gi|452099135|gb|AGF96075.1| Coenzyme B synthesis from 2-oxoglutarate small subunit
[Methanosarcina mazei Tuc01]
Length = 168
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 96/172 (55%), Gaps = 21/172 (12%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + G++IDTD IIP +YL + + ++A+ G+ ++ +
Sbjct: 7 GRVWKFGNDIDTDVIIPGKYL-----RTKDMQVFAAHAMEGIDPGFSKK-------AKPG 54
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
II+AG NFGCGSSRE AP+AL AG + +VA+S+ARIFFRN++ G PL EA +
Sbjct: 55 DIIVAGDNFGCGSSREQAPLALKHAGIACIVAKSFARIFFRNAINIG--LPL-MEADI-- 109
Query: 192 ECSTGDVVTIEIAESRLINHTTGKE-YKLKPIGD-LGPVIDAGGIFAYARKT 241
EC GD + +++ + + +GK ++ + D L ++ GG+ A+ +K
Sbjct: 110 ECEEGDQIEVDLLKGEV--KVSGKGVFRGNKLPDFLLDMLTDGGLVAHRKKV 159
>gi|320160233|ref|YP_004173457.1| 3-isopropylmalate dehydratase small subunit [Anaerolinea
thermophila UNI-1]
gi|319994086|dbj|BAJ62857.1| 3-isopropylmalate dehydratase small subunit [Anaerolinea
thermophila UNI-1]
Length = 164
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 89/170 (52%), Gaps = 16/170 (9%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + G+N++TD+IIPA Y + DE E L + A + + +
Sbjct: 2 GRAWKFGENLNTDEIIPARYNITI----DEKE-LAAKAFCEIRPEFAAQV-------QPG 49
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
+I+AG NFGCGSSREHA VA+ G V+A S+ARIFFRN++ G P+ E
Sbjct: 50 DVIVAGRNFGCGSSREHAAVAIRGTGVQCVIAPSFARIFFRNAINIG--LPI-LECPQAV 106
Query: 192 ECSTGDVVTIEIAESRLINHTTGKEYKLKPI-GDLGPVIDAGGIFAYARK 240
E GD + + ++ + N + GK Y P+ + +++AGG+ + R+
Sbjct: 107 EIEDGDQIEVNLSRGEIRNLSQGKVYPANPLPAFVLKIVEAGGLVRFLRE 156
>gi|374630765|ref|ZP_09703150.1| 3-isopropylmalate dehydratase, small subunit [Methanoplanus
limicola DSM 2279]
gi|373908878|gb|EHQ36982.1| 3-isopropylmalate dehydratase, small subunit [Methanoplanus
limicola DSM 2279]
Length = 157
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 80/171 (46%), Gaps = 20/171 (11%)
Query: 71 HGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTK 130
G +G+++DTD II YL + + +A R K
Sbjct: 4 KGTAVCIGEDVDTDMIIAGRYL-----RTKDRKVWADHAFEDYDPDIAGRL--------K 50
Query: 131 YKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLC 190
+IIAG N GCGSSRE A +AL AG AVV+ S+ARIFFRN V TG + E +
Sbjct: 51 GSVIIAGKNIGCGSSREQAAIALKEAGVLAVVSPSFARIFFRNLVNTGILVFETDEIK-- 108
Query: 191 EECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
C GD V E R+ G Y KPI + + +I AGG+ Y RK
Sbjct: 109 --CKDGDEVIFSADEDRV--EVAGIRYDAKPISESMKEIIRAGGLIEYMRK 155
>gi|365132632|ref|ZP_09342276.1| 3-isopropylmalate dehydratase small subunit [Subdoligranulum sp.
4_3_54A2FAA]
gi|363616572|gb|EHL68008.1| 3-isopropylmalate dehydratase small subunit [Subdoligranulum sp.
4_3_54A2FAA]
Length = 158
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 90/158 (56%), Gaps = 15/158 (9%)
Query: 79 DNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKIIIAGG 138
DN+DTD IIPA YL N ++++L ++ + + A + +N + ++ AG
Sbjct: 11 DNVDTDVIIPARYL-----NTADHKELAAHCMEDIDAQF------KNNVRPG-DVMAAGW 58
Query: 139 NFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEECSTGDV 198
NFGCGSSREHAP+A+ +G + V+A+S+ARIF+RN++ G P+ + + GD
Sbjct: 59 NFGCGSSREHAPIAIRESGVACVIAKSFARIFYRNAINIG--LPIFECEAASDGIAAGDE 116
Query: 199 VTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIF 235
V ++ + N T + Y+ +P+ + +++ GG+
Sbjct: 117 VRVDFDTGLITNLTKNEMYQAQPLPPFIQNIVNRGGLL 154
>gi|323702810|ref|ZP_08114469.1| 3-isopropylmalate dehydratase, small subunit [Desulfotomaculum
nigrificans DSM 574]
gi|333923907|ref|YP_004497487.1| 3-isopropylmalate dehydratase small subunit [Desulfotomaculum
carboxydivorans CO-1-SRB]
gi|323532198|gb|EGB22078.1| 3-isopropylmalate dehydratase, small subunit [Desulfotomaculum
nigrificans DSM 574]
gi|333749468|gb|AEF94575.1| 3-isopropylmalate dehydratase small subunit [Desulfotomaculum
carboxydivorans CO-1-SRB]
Length = 166
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 98/176 (55%), Gaps = 20/176 (11%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYL--TLVPSNPDEYEKLGSYALIGLPATYTTRFIDENET 127
+ G C+ G++++TD II +Y TL + +L + + L + +
Sbjct: 3 YQGKCHKFGNDVNTDYIISGKYKFKTL------DMNELAKHVMEDLDPDFYNKI------ 50
Query: 128 KTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEA 187
T I+AG NFGCGSSRE AP+A+ A SAV+A+S+ARIF+RN++ TG + ++ +
Sbjct: 51 -TPGDFIVAGTNFGCGSSREQAPLAIKHANISAVLAKSFARIFYRNAINTG-LPVIECDT 108
Query: 188 RLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARKTG 242
L + GD++ I++A +IN + +KP+ + +++ GG+ A+ RK G
Sbjct: 109 DLID---AGDLLDIDLASGYIINRSKDITIAVKPLPQVMIKILNDGGLAAHFRKYG 161
>gi|159041738|ref|YP_001540990.1| 3-isopropylmalate dehydratase small subunit [Caldivirga
maquilingensis IC-167]
gi|157920573|gb|ABW02000.1| 3-isopropylmalate dehydratase, small subunit [Caldivirga
maquilingensis IC-167]
Length = 175
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/179 (36%), Positives = 95/179 (53%), Gaps = 18/179 (10%)
Query: 66 PTATFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDEN 125
P G VGDNIDTD IIPA+YL V ++P LG +A+ L +
Sbjct: 10 PQLVVEGRVIKVGDNIDTDVIIPAKYL--VYTDP---SILGKHAMEPLDPNFYE------ 58
Query: 126 ETKTKYKIIIAGGN-FGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLD 184
K K +I+ GG FG GSSRE A +AL AAG AV+AE +ARIF+RN++ G P+
Sbjct: 59 --KAKNGVILVGGRAFGMGSSREQAAIALKAAGVKAVLAEYFARIFYRNAINNG--LPVL 114
Query: 185 SEARLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPI-GDLGPVIDAGGIFAYARKTG 242
+ + + + GD V + + +I + + + K KPI G ++ GG+ Y + +G
Sbjct: 115 TVPGVSKMINDGDHVRVIVDTGEIIINDS-RVIKAKPITGVALEILLKGGLLNYLKSSG 172
>gi|15806785|ref|NP_295507.1| 3-isopropylmalate dehydratase small subunit [Deinococcus
radiodurans R1]
gi|23396684|sp|Q9RTI0.1|LEUD2_DEIRA RecName: Full=3-isopropylmalate dehydratase small subunit 2;
AltName: Full=Alpha-IPM isomerase 2; Short=IPMI 2;
AltName: Full=Isopropylmalate isomerase 2
gi|6459552|gb|AAF11332.1|AE002019_5 3-isopropylmalate dehydratase, small subunit [Deinococcus
radiodurans R1]
Length = 208
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 83/162 (51%), Gaps = 15/162 (9%)
Query: 79 DNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKIIIAGG 138
D+I+TD+IIPA +LT D +L YA+ + R II+AG
Sbjct: 10 DHINTDEIIPARHLTT-----DVESELAKYAMEDYDKDFVRRV-------QPGDIIVAGA 57
Query: 139 NFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEECSTGDV 198
+FGCGSSREHA AL AG SAV+A ++ARI++RNS+ G L+ E + E G+
Sbjct: 58 DFGCGSSREHAVWALRGAGVSAVIAPNFARIYYRNSINNG-FLALECEG-ITELFQDGEE 115
Query: 199 VTIEIAESRLINHTTGKEYKLKPIGDLG-PVIDAGGIFAYAR 239
+++ + N TGKE P+ V AGG Y +
Sbjct: 116 AELDLKGGTIRNPRTGKELSFVPVPQFALDVQKAGGWLEYMK 157
>gi|94985136|ref|YP_604500.1| 3-isopropylmalate dehydratase small subunit [Deinococcus
geothermalis DSM 11300]
gi|94555417|gb|ABF45331.1| 3-isopropylmalate dehydratase, small subunit [Deinococcus
geothermalis DSM 11300]
Length = 174
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 83/163 (50%), Gaps = 15/163 (9%)
Query: 79 DNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKIIIAGG 138
D+I+TD+IIPA +LT D +L YA+ + R II+AG
Sbjct: 10 DHINTDEIIPARHLT-----TDVEAELAKYAMEDYDKNFVKRV-------KPGDIIVAGA 57
Query: 139 NFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEECSTGDV 198
+FGCGSSREHA AL AG +AV+A ++ARIF+RN++ G L+ E + E GD
Sbjct: 58 DFGCGSSREHAVWALRGAGVAAVIAPNFARIFYRNAINNG-FLALECE-NVVETFMDGDP 115
Query: 199 VTIEIAESRLINHTTGKEYKLKPIGDLG-PVIDAGGIFAYARK 240
+++ + N TG+ P+ V AGG Y R+
Sbjct: 116 AELDLTGGTITNLRTGQTLHFVPVPQFALDVQKAGGWLEYMRE 158
>gi|336324544|ref|YP_004604511.1| 3-isopropylmalate dehydratase small subunit [Flexistipes
sinusarabici DSM 4947]
gi|336108125|gb|AEI15943.1| 3-isopropylmalate dehydratase, small subunit [Flexistipes
sinusarabici DSM 4947]
Length = 201
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/159 (40%), Positives = 82/159 (51%), Gaps = 27/159 (16%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETK------T 129
+V ++IDTD+IIPA YL V ++ LG YA Y RF + K
Sbjct: 16 IVLNDIDTDRIIPARYLKCVT-----FDGLGKYAF------YDDRFNTDGTEKEHPLNDK 64
Query: 130 KYK---IIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDS- 185
++K III+G NFGCGSSREHAP A+ AG AVVAES+A IF N+ G + S
Sbjct: 65 RFKGANIIISGANFGCGSSREHAPQAIKRAGIDAVVAESFAEIFHGNATTLGIVCITLSR 124
Query: 186 ----EARLCEECSTGDVVTIEIAESRLINHTTGKEYKLK 220
E R E S + I I + L HT GK YK +
Sbjct: 125 SEINELRFLVEKSPETKLLINIEKETL--HTPGKTYKFQ 161
>gi|239626911|ref|ZP_04669942.1| 3-isopropylmalate dehydratase [Clostridiales bacterium 1_7_47_FAA]
gi|239517057|gb|EEQ56923.1| 3-isopropylmalate dehydratase [Clostridiales bacterium 1_7_47FAA]
Length = 160
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/172 (36%), Positives = 91/172 (52%), Gaps = 21/172 (12%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDEN-ETKTK 130
G + D++DTDQII ++YL L N DE + +T +D + K K
Sbjct: 4 GTVFKFHDDLDTDQIIASQYLLL--PNIDEMK------------VHTFESLDPDFPGKVK 49
Query: 131 YKIIIAGG-NFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
+ GG NFGCGSSRE AP L A G AV+A+S+ARIF+RNS+ G P+ L
Sbjct: 50 EGDYVVGGENFGCGSSREQAPSVLKALGVKAVIAKSFARIFYRNSINIG--LPVIVCKEL 107
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
+E TGD T+E++ S + GKEY + + + +++ GG+ A K
Sbjct: 108 PDEVKTGD--TMELSMSEGVARANGKEYACTRLPEYMQNILNQGGLIASLNK 157
>gi|374322100|ref|YP_005075229.1| 3-isopropylmalate dehydratase large subunit [Paenibacillus terrae
HPL-003]
gi|357201109|gb|AET59006.1| 3-isopropylmalate dehydratase large subunit [Paenibacillus terrae
HPL-003]
Length = 165
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 94/166 (56%), Gaps = 18/166 (10%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
F G + + D++DTD II + ++ + +++GS+ L L + + E K
Sbjct: 5 FSGKVWKLPDDVDTDTIIAGRHGVIL-----DKKEMGSHCLETLRPEFAS------EVKP 53
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
I++AG NFGCGSSRE A A+ G +VA+S+ARIFFRN++ G + ++SE +
Sbjct: 54 G-DILVAGKNFGCGSSREMAAEAINVHGVECIVAKSFARIFFRNAINNGMLL-IESE-EI 110
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGI 234
E C GD++T+E+ + +N GK +++ + D L +I GG+
Sbjct: 111 PESCEEGDILTVEVNQKVTVN---GKGFEISKLPDNLFAIIQDGGL 153
>gi|218132708|ref|ZP_03461512.1| hypothetical protein BACPEC_00569 [[Bacteroides] pectinophilus ATCC
43243]
gi|217992434|gb|EEC58437.1| 3-isopropylmalate dehydratase, small subunit [[Bacteroides]
pectinophilus ATCC 43243]
Length = 158
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 91/163 (55%), Gaps = 17/163 (10%)
Query: 79 DNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKIIIAGG 138
+++DTDQII ++YL L+P N DE + S+A L A + + D + II+AG
Sbjct: 9 NDVDTDQIIASQYL-LLP-NIDE---MKSHAFESLDADFASGVKDGD-------IIVAGD 56
Query: 139 NFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEECSTGDV 198
NFGCGSSRE AP L A G AV A+S+ARIF+RNS+ G P+ L + + GD
Sbjct: 57 NFGCGSSREQAPSVLKALGIKAVYAKSFARIFYRNSINIG--LPVLVCEDLHDNVAAGDE 114
Query: 199 VTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
I++ + GKE+ + + + +++AGG+ A K
Sbjct: 115 ADIDLTAGTV--KACGKEFTCTKLPEYMQNILNAGGLIASLNK 155
>gi|261402980|ref|YP_003247204.1| 3-isopropylmalate dehydratase small subunit [Methanocaldococcus
vulcanius M7]
gi|261369973|gb|ACX72722.1| 3-isopropylmalate dehydratase, small subunit [Methanocaldococcus
vulcanius M7]
Length = 162
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 92/170 (54%), Gaps = 18/170 (10%)
Query: 69 TFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETK 128
G + GD++DTD IIP YL D YE L Y + G+ ++ + + E +
Sbjct: 1 MIRGRVHKFGDDVDTDAIIPGPYL----KTTDPYE-LARYCMYGIDKEFSKK-VKEGD-- 52
Query: 129 TKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEAR 188
+I+AG NFGCGSSRE A +A+ G AV+A+S+ARIF+RN++ G ++P+ +
Sbjct: 53 ----VIVAGENFGCGSSREQAVIAIKYCGIKAVIAKSFARIFYRNAINIG-LFPIIANT- 106
Query: 189 LCEECSTGDVVTIEIAESRLI-NHTTGKEYKLKPIGDLGPVIDAGGIFAY 237
+E D+V I++ ++ N + K+ P G ++DA G+ Y
Sbjct: 107 --DELEDNDIVEIDLDNEKITANENLILDCKV-PKGVERKILDAEGLINY 153
>gi|296272950|ref|YP_003655581.1| 3-isopropylmalate dehydratase small subunit [Arcobacter
nitrofigilis DSM 7299]
gi|296097124|gb|ADG93074.1| 3-isopropylmalate dehydratase, small subunit [Arcobacter
nitrofigilis DSM 7299]
Length = 166
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/170 (38%), Positives = 91/170 (53%), Gaps = 18/170 (10%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + G NIDTD II A YL N + E L Y + + + K
Sbjct: 6 GKVWNFGANIDTDIIIAARYL-----NSSDPEHLAKYIMEDADPEFPKKL-------QKG 53
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG-EIYPLDSEARLC 190
II+AG NFGCGSSREHAP+AL AAG +AVVA S+ARIF+RN+ G I+ L +
Sbjct: 54 DIIVAGENFGCGSSREHAPIALKAAGVAAVVAPSFARIFYRNAFNMGLPIFELPESLEIK 113
Query: 191 EECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYAR 239
E G+ ++I++ + N+T K YK I + +I +GG+ YA+
Sbjct: 114 E----GEEISIDLDNGEITNNTQNKTYKFTAIPPFMQELIASGGLINYAK 159
>gi|290968774|ref|ZP_06560311.1| 3-isopropylmalate dehydratase small subunit [Megasphaera genomosp.
type_1 str. 28L]
gi|335049125|ref|ZP_08542135.1| 3-isopropylmalate dehydratase small subunit [Megasphaera sp. UPII
199-6]
gi|290781070|gb|EFD93661.1| 3-isopropylmalate dehydratase small subunit [Megasphaera genomosp.
type_1 str. 28L]
gi|333764237|gb|EGL41637.1| 3-isopropylmalate dehydratase small subunit [Megasphaera sp. UPII
199-6]
Length = 172
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 90/170 (52%), Gaps = 15/170 (8%)
Query: 75 YVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKII 134
+ GD++DTD IIPA YL N + + L ++ + L + +R + +
Sbjct: 8 WKYGDHVDTDVIIPARYL-----NTFDPKVLAAHCMEDLDPEFASRVRPGD-------FL 55
Query: 135 IAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEECS 194
+ G NFGCGSSREHAP+A+ A G V+A +ARIF+RN++ G P+ + EE
Sbjct: 56 VGGWNFGCGSSREHAPLAIKACGIRVVIAAGFARIFYRNAINVG--LPVLEIGKCAEEIK 113
Query: 195 TGDVVTIEIAESRLINHTTGKEYKLKPI-GDLGPVIDAGGIFAYARKTGM 243
+ + + +A + + T + + +P+ G + + AGG+ AY + G+
Sbjct: 114 SCRSLRVNMATGTISDVHTARCWHARPLPGFIRDIAAAGGLIAYVKGGGL 163
>gi|291278669|ref|YP_003495504.1| 3-isopropylmalate dehydratase small subuni [Deferribacter
desulfuricans SSM1]
gi|290753371|dbj|BAI79748.1| 3-isopropylmalate dehydratase, small subuni [Deferribacter
desulfuricans SSM1]
Length = 200
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/112 (45%), Positives = 64/112 (57%), Gaps = 20/112 (17%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENET------KT 129
++GD+IDTD+IIPA YL V ++ LG +A Y RF E +
Sbjct: 16 ILGDDIDTDRIIPARYLKCVT-----FDGLGEFAF------YDERFDKEGNSLGHPLDDE 64
Query: 130 KYK---IIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG 178
K+K II+ G NFGCGSSREHAP AL AG A++AES+A IF NS G
Sbjct: 65 KFKGSNIILTGKNFGCGSSREHAPQALKRAGIDAIIAESFAEIFLGNSTTLG 116
>gi|328950196|ref|YP_004367531.1| 3-isopropylmalate dehydratase small subunit [Marinithermus
hydrothermalis DSM 14884]
gi|328450520|gb|AEB11421.1| 3-isopropylmalate dehydratase small subunit [Marinithermus
hydrothermalis DSM 14884]
Length = 163
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 88/170 (51%), Gaps = 16/170 (9%)
Query: 74 CYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKI 133
+ GD+I+TD I+P +Y + ++ +YA L + F + +
Sbjct: 4 VWKFGDHINTDDILPGKYAPFMVGE----DRFHTYAFAHLRPGFAQAFRPGD-------V 52
Query: 134 IIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEEC 193
++AG N G GSSRE+AP AL G A++A+SYARIF+RN V G I P +SE + +
Sbjct: 53 LVAGRNLGLGSSREYAPEALKRLGLKAIIAKSYARIFYRNLVNLG-IIPFESE-EVVDAL 110
Query: 194 STGDVVTIEIAESRLINHTTGKEYKL-KPIGDLGPVIDAGGIFAYARKTG 242
GD V +EIA L G+ Y+L P L ++AG + Y ++ G
Sbjct: 111 EDGDEVELEIASGTL--RHGGRTYRLTPPPAFLLEALEAGSLLEYYKRRG 158
>gi|238917292|ref|YP_002930809.1| 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit
[Eubacterium eligens ATCC 27750]
gi|259494362|sp|C4Z1K1.1|LEUD_EUBE2 RecName: Full=3-isopropylmalate dehydratase small subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|238872652|gb|ACR72362.1| 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit
[Eubacterium eligens ATCC 27750]
Length = 164
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 69/172 (40%), Positives = 91/172 (52%), Gaps = 18/172 (10%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
F G +V+GD+IDTD IIP EYL L E + YA L +
Sbjct: 5 FSGKVWVLGDDIDTDIIIPTEYLAL-----KTVEDMKPYAFSPLRPELAGQI-------K 52
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
II+AG NFGCGSSRE AP + A G V+A+SYARIFFRNS+ G + L A L
Sbjct: 53 PGDIIVAGKNFGCGSSREQAPEVIKALGIKCVIAKSYARIFFRNSINNGLL--LIENADL 110
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
+E + GD + +E+ I H GK Y + + D L +++AGG+ RK
Sbjct: 111 HDEVTEGDTIDVEVNAK--ITH-NGKAYPIASLPDNLVDILNAGGLVKAMRK 159
>gi|239623332|ref|ZP_04666363.1| 3-isopropylmalate dehydratase small subunit 1 [Clostridiales
bacterium 1_7_47_FAA]
gi|239522298|gb|EEQ62164.1| 3-isopropylmalate dehydratase small subunit 1 [Clostridiales
bacterium 1_7_47FAA]
Length = 169
Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 88/168 (52%), Gaps = 19/168 (11%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + G+++DTD I+PA YL L P+E A + ID ++T +
Sbjct: 2 GNVFKYGNSVDTDVILPARYLALF--QPNEL------------AAHCMEDIDPLFSRTVH 47
Query: 132 --KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
+I+AG NFGCGSSREHAP+A+ A G S V+A S+ARIF+RN++ G P+ +
Sbjct: 48 PGDVIVAGENFGCGSSREHAPLAIKACGISCVIAASFARIFYRNAINIG--LPIIESPQA 105
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFA 236
GD + I+ + N T Y++ + + +I+ GG+ A
Sbjct: 106 ANGILHGDKLEIDWKTGVIRNLTQNSTYQIGVFPEFIQDIINDGGLLA 153
>gi|313673981|ref|YP_004052092.1| 3-isopropylmalate dehydratase small subunit [Calditerrivibrio
nitroreducens DSM 19672]
gi|312940737|gb|ADR19929.1| 3-isopropylmalate dehydratase, small subunit [Calditerrivibrio
nitroreducens DSM 19672]
Length = 200
Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 49/112 (43%), Positives = 68/112 (60%), Gaps = 20/112 (17%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT------ 129
++GD+IDTD+IIPA YL V ++ +G +A Y RF ++ K
Sbjct: 16 ILGDDIDTDRIIPARYLKCVT-----FDGIGEFAF------YDERFENDGTPKNHPMNDP 64
Query: 130 KYK---IIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG 178
KYK II++G NFGCGSSREHAP ++ AG A++AES+A IF+ NS+ G
Sbjct: 65 KYKGANIILSGNNFGCGSSREHAPQSIKRAGFQAIIAESFAEIFYGNSLTLG 116
>gi|390454429|ref|ZP_10239957.1| 3-isopropylmalate dehydratase large subunit [Paenibacillus peoriae
KCTC 3763]
Length = 169
Score = 86.7 bits (213), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 92/167 (55%), Gaps = 18/167 (10%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
F G + + D++DTD II + ++ + +++GS+ L L + ++
Sbjct: 5 FGGKVWKLPDDVDTDTIIAGRHGVIL-----DKKEMGSHCLETLRPEFASQV-------H 52
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
II+AG NFGCGSSRE A A+ G ++A+S+ARIFFRN++ G + L A +
Sbjct: 53 PGDIIVAGKNFGCGSSREMAAEAINVHGVYCIIAKSFARIFFRNAINNGML--LIESAEI 110
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIF 235
+ C GD++T+E+ ++ +N GK++ + + D L +I GG+
Sbjct: 111 PDNCEEGDILTVEMNQAVTVN---GKKFNIPKVPDNLFEIIQDGGLI 154
>gi|160903140|ref|YP_001568721.1| 3-isopropylmalate dehydratase, small subunit [Petrotoga mobilis
SJ95]
gi|160360784|gb|ABX32398.1| 3-isopropylmalate dehydratase, small subunit [Petrotoga mobilis
SJ95]
Length = 167
Score = 86.7 bits (213), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 94/176 (53%), Gaps = 16/176 (9%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
G + GD+++TD II +Y N + ++L + + L + NE K
Sbjct: 3 LKGYSHKFGDDVNTDYIISGKY----KFNTIDMDELSVHLMEDLRPNFY------NEIK- 51
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
K I+AG NFGCGSSRE AP+ + AG SAV+A S+ARIF+RNS+ G PL
Sbjct: 52 KGDFIVAGENFGCGSSREQAPLVIKHAGISAVIATSFARIFYRNSINIG--LPLVEVP-- 107
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARKTGMI 244
+ GD++T+++ + + N T + K+K + + ++ +GG+ Y +K G +
Sbjct: 108 TDNIEEGDLLTVDLEKGVVKNLTKDEILKIKSLPKVMLKILQSGGLVNYYKKYGTL 163
>gi|167771175|ref|ZP_02443228.1| hypothetical protein ANACOL_02533 [Anaerotruncus colihominis DSM
17241]
gi|167666594|gb|EDS10724.1| 3-isopropylmalate dehydratase, small subunit [Anaerotruncus
colihominis DSM 17241]
Length = 163
Score = 86.7 bits (213), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 81/148 (54%), Gaps = 15/148 (10%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
G V+GD++DTDQI+P + + ++LG +A+ GL +D
Sbjct: 4 IKGKVIVLGDDVDTDQILPGYAMA------EPMDQLGKFAMAGLAG------LDFKSVFE 51
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
I++AG NFGCGSSRE AP+AL G S V+A+ +ARIF RNS+ G P+ + A +
Sbjct: 52 PGSILVAGRNFGCGSSREQAPIALRQVGVSLVIAKGFARIFRRNSINIG--LPVWA-ADV 108
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEY 217
+ TGD++ ++ + + + K++
Sbjct: 109 ADSLHTGDIIEADLEKGTVTVNGEVKQF 136
>gi|167748770|ref|ZP_02420897.1| hypothetical protein ANACAC_03544 [Anaerostipes caccae DSM 14662]
gi|167651740|gb|EDR95869.1| 3-isopropylmalate dehydratase, small subunit [Anaerostipes caccae
DSM 14662]
Length = 163
Score = 86.7 bits (213), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 68/172 (39%), Positives = 98/172 (56%), Gaps = 18/172 (10%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
F G +V+GD+IDTD IIP EYL L P+ E + Y L ++ I E +
Sbjct: 4 FTGKVWVLGDDIDTDIIIPTEYLAL-PT----VEDMKQYGFSPLRPELASQ-IKEGD--- 54
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
II+AG NFGCGSSRE AP + A V+A+S+ARIFFRNS+ G + L ++
Sbjct: 55 ---IIVAGKNFGCGSSREQAPEIIKALKIKCVIAKSFARIFFRNSINNGLL--LIENDQI 109
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPI-GDLGPVIDAGGIFAYARK 240
E+ GD + + + ES I H G+EY ++P+ +L +I+AGG+ +K
Sbjct: 110 QEKVKEGDTLDVTLGES--IVH-DGREYPIQPLPQNLMDIIEAGGLVEAMKK 158
>gi|296531969|ref|ZP_06894754.1| 3-isopropylmalate dehydratase small subunit [Roseomonas cervicalis
ATCC 49957]
gi|296267703|gb|EFH13543.1| 3-isopropylmalate dehydratase small subunit [Roseomonas cervicalis
ATCC 49957]
Length = 167
Score = 86.7 bits (213), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/177 (35%), Positives = 92/177 (51%), Gaps = 19/177 (10%)
Query: 67 TATFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENE 126
+A G + GD ++TD I+P YL L P+E LG + L GL + R
Sbjct: 2 SALLTGRVHRFGDEVNTDVILPGRYLAL--RKPEE---LGKHCLEGLDPGFVQRV----- 51
Query: 127 TKTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSE 186
I+ G NFGCGSSREHA +AL AAG A+VA S ARIFFRN+V G L +E
Sbjct: 52 --RPGDILAVGRNFGCGSSREHAVIALKAAGVGAIVAVSAARIFFRNAVNLGLPVLLCAE 109
Query: 187 ARLCEECSTGDVVTIEIAESRLINHTTGK-EYKLKPIG-DLGPVIDAGGIFAYARKT 241
A G+ +I++ ++ T G+ ++ P+G ++ ++ AGG+ R+
Sbjct: 110 A--AAGLREGEAASIDLDA---LSVTQGEAAWQAAPLGAEVRAILAAGGLVPRVRQA 161
>gi|305664163|ref|YP_003860451.1| 3-isopropylmalate dehydratase small subunit [Ignisphaera aggregans
DSM 17230]
gi|304378732|gb|ADM28571.1| 3-isopropylmalate dehydratase, small subunit [Ignisphaera aggregans
DSM 17230]
Length = 173
Score = 86.3 bits (212), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 92/174 (52%), Gaps = 13/174 (7%)
Query: 71 HGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTK 130
G C+ +GDNI TD II +Y ++E + + + LP + + + +
Sbjct: 4 RGKCWKLGDNISTDHIISGKY---------KFEAIDDISKM-LPHLFEEVIPEFYKKVSP 53
Query: 131 YKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLC 190
II+AG NFG GSSRE AP + AG SA++A+S+A IF+RN++ G P+ RL
Sbjct: 54 GDIIVAGRNFGKGSSREQAPRLIKMAGISAIIAKSFAHIFYRNAINIG--LPVIVLQRLS 111
Query: 191 EECSTGDVVTIEIAESRLINHTTGKEYKLKPI-GDLGPVIDAGGIFAYARKTGM 243
+ +GD++ +++ IN + + + P ++ ++ GI +Y ++ G+
Sbjct: 112 DVTESGDIIEVDLVNGYAINVSKNFQERFAPYPKEIELILLNNGIVSYIKRYGV 165
>gi|389861098|ref|YP_006363338.1| 3-isopropylmalate dehydratase small subunit [Thermogladius
cellulolyticus 1633]
gi|388526002|gb|AFK51200.1| 3-isopropylmalate dehydratase small subunit [Thermogladius
cellulolyticus 1633]
Length = 171
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 89/174 (51%), Gaps = 15/174 (8%)
Query: 71 HGLCYVVGDNIDTDQIIPAEY-LTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
G +GD+I TD II +Y + D+ K+ + L + + + +
Sbjct: 4 RGRAIKLGDDISTDHIISGKYKFEFI----DDISKMIPHVLEDVIPEFYKKV-------S 52
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
K II+AG NFG GSSREHAP L G SAVVA+S+ IF+RNSV G P+ +
Sbjct: 53 KGDIIVAGRNFGKGSSREHAPRLLKMVGISAVVAKSFGFIFYRNSVNIG--LPVVKAKVI 110
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPI-GDLGPVIDAGGIFAYARKTG 242
+ +GDV+ +++A + + T G E K+ P + VI GGI Y +K G
Sbjct: 111 PDTAESGDVIEVDLARGIVRDITKGVEEKVPPYPPEFLEVISEGGIVEYIKKRG 164
>gi|83591074|ref|YP_431083.1| 3-isopropylmalate dehydratase small subunit [Moorella thermoacetica
ATCC 39073]
gi|123523877|sp|Q2RG99.1|LEUD_MOOTA RecName: Full=3-isopropylmalate dehydratase small subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|83573988|gb|ABC20540.1| 3-isopropylmalate dehydratase, small subunit [Moorella
thermoacetica ATCC 39073]
Length = 166
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/174 (40%), Positives = 96/174 (55%), Gaps = 16/174 (9%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
G C+ G++IDTD IIPA YL ++P E L + + T+ R
Sbjct: 3 IQGKCHTFGNDIDTDAIIPARYLNT--TDPGE---LARHCMEDADPTFAGRV-------Q 50
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
K +II+AG NFGCGSSREHAPVA+ AAG +AVVA S+ARIF+RN++ G P+
Sbjct: 51 KGEIIVAGKNFGCGSSREHAPVAIKAAGVAAVVAASFARIFYRNAINIG--LPIFESPEA 108
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAY-ARKT 241
GD V I+ + ++N T G+ Y + P + +I AGG+ Y ARK
Sbjct: 109 AAGIKAGDEVKIDAGKGEIVNLTRGETYPVAPFPPFMQELIAAGGLMPYVARKV 162
>gi|357420648|ref|YP_004933640.1| 3-isopropylmalate dehydratase small subunit [Thermovirga lienii DSM
17291]
gi|355398114|gb|AER67543.1| 3-isopropylmalate dehydratase, small subunit [Thermovirga lienii
DSM 17291]
Length = 169
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/108 (45%), Positives = 60/108 (55%), Gaps = 12/108 (11%)
Query: 71 HGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTK 130
G +GDNIDTD IIP YL + E ++L + L E T
Sbjct: 4 RGKVVKIGDNIDTDLIIPGRYLQIT-----EIDELKEHVFEDLGEVL-------REKITP 51
Query: 131 YKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG 178
I++AG NFGCGSSRE AP L AAG SA+VA+S+ARIF RNS+ G
Sbjct: 52 GTILVAGENFGCGSSREQAPRVLKAAGVSAIVAKSFARIFLRNSINIG 99
>gi|225028798|ref|ZP_03717990.1| hypothetical protein EUBHAL_03077 [Eubacterium hallii DSM 3353]
gi|224953882|gb|EEG35091.1| 3-isopropylmalate dehydratase small subunit [Eubacterium hallii DSM
3353]
Length = 163
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/177 (39%), Positives = 99/177 (55%), Gaps = 19/177 (10%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
F G +V+GD+IDTD IIP EYL L P+ E + Y L ++ I E +
Sbjct: 4 FTGKVWVLGDDIDTDIIIPTEYLAL-PT----VEDMKQYGFSPLRPELASQ-IQEGD--- 54
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
II+AG NFGCGSSRE AP + A V+A+SYARIFFRNS+ G + +S+ +
Sbjct: 55 ---IIVAGKNFGCGSSREQAPEIIKALKVKCVIAKSYARIFFRNSINNGLLLIENSDIQ- 110
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIF-AYARKTGMI 244
+ GD +T+ + ES GK Y + P+ D L +I+AGG+ A ++ G+I
Sbjct: 111 -DVIKEGDSLTVNMGESL---EFDGKTYPIHPLPDNLMDIINAGGLVKAMQKRNGII 163
>gi|219852733|ref|YP_002467165.1| 3-isopropylmalate dehydratase small subunit [Methanosphaerula
palustris E1-9c]
gi|219546992|gb|ACL17442.1| 3-isopropylmalate dehydratase, small subunit [Methanosphaerula
palustris E1-9c]
Length = 156
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/167 (37%), Positives = 89/167 (53%), Gaps = 25/167 (14%)
Query: 77 VGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFID-ENETKTKYKIII 135
VG +IDTD II YL + + A +T +D + K +I+
Sbjct: 10 VGRDIDTDLIIAGRYLRTTERS--------------IWAAHTFEDLDPAMAGRLKGAVIV 55
Query: 136 AGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEECST 195
AG NFGCGSSRE APVAL AG +VA S+ARIFFRN++ G PL EA L C
Sbjct: 56 AGENFGCGSSREQAPVALKMAGVVGIVAPSFARIFFRNAINIG--LPL-IEADL--RCVD 110
Query: 196 GDVVTIEIAESRLINHTTG-KEYKLKPIGD-LGPVIDAGGIFAYARK 240
G+ VT ++AE + T G + + P+ + ++DAGG+ A+ ++
Sbjct: 111 GETVTFDLAEGVV---TVGERTISVTPLSSHMQAILDAGGLVAFWKE 154
>gi|269139329|ref|YP_003296030.1| 3-isopropylmalate dehydratase small subunit [Edwardsiella tarda
EIB202]
gi|387867922|ref|YP_005699391.1| 3-isopropylmalate dehydratase small subunit [Edwardsiella tarda
FL6-60]
gi|267984990|gb|ACY84819.1| 3-isopropylmalate dehydratase small subunit [Edwardsiella tarda
EIB202]
gi|304559235|gb|ADM41899.1| 3-isopropylmalate dehydratase small subunit [Edwardsiella tarda
FL6-60]
Length = 167
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 87/174 (50%), Gaps = 17/174 (9%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
HG + G+NI+TD I P +++ L + Y L + + E
Sbjct: 5 LHGNVWTFGNNINTDIISPPQHMAL------SIAEAAPYCLAAVNPYFA-------EQVR 51
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
I++AG N G GSSRE +P+ L G AVVA S+ARIF+RN + G P S R
Sbjct: 52 PGDILVAGNNLGSGSSRETSPLTLKYLGIQAVVARSFARIFYRNCINLG--IPALSAPR- 108
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARKTG 242
E GD ++I+IA+ ++N T + Y + D + +I AGG+ Y R+TG
Sbjct: 109 ASEIRQGDALSIDIAQGIILNITQQEIYPCTRLPDHIMAMIRAGGLVNYLRQTG 162
>gi|291519676|emb|CBK74897.1| 3-isopropylmalate dehydratase, small subunit [Butyrivibrio
fibrisolvens 16/4]
Length = 159
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 88/167 (52%), Gaps = 18/167 (10%)
Query: 75 YVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKII 134
+ + ++IDTD I+P EYL + +++ YA L + +I
Sbjct: 5 WKLDNDIDTDIILPTEYLAF-----ETVQEMKPYAFSPLRPDLAGQI-------KPGDMI 52
Query: 135 IAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEECS 194
+AG NFGCGSSRE AP + A G S +VA+S+ARIFFRN++ G + L + L +E +
Sbjct: 53 VAGNNFGCGSSREQAPEVVKALGISCIVAKSFARIFFRNAINNGLL--LIEQPDLYDEVN 110
Query: 195 TGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
GD + + ++N GK Y + + D L +++AGG+ RK
Sbjct: 111 EGDEAEVIPGKEIIVN---GKHYPIANLPDNLTEILEAGGLVKAMRK 154
>gi|169831199|ref|YP_001717181.1| 3-isopropylmalate dehydratase small subunit [Candidatus
Desulforudis audaxviator MP104C]
gi|169638043|gb|ACA59549.1| 3-isopropylmalate dehydratase, small subunit [Candidatus
Desulforudis audaxviator MP104C]
Length = 166
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 92/172 (53%), Gaps = 16/172 (9%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + GD+++TD II +Y + +L + + L + + T
Sbjct: 5 GKAHKFGDDVNTDYIISGKY----KFKTLDMAELARHVMEDLDPDFHRKI-------TAG 53
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
I+AG NFGCGSSRE AP+A+ AG SAVVA S+ARIF+RN++ TG + ++ + R E
Sbjct: 54 DFIVAGRNFGCGSSREQAPLAIKHAGISAVVARSFARIFYRNAINTG-LPVIECDTRAIE 112
Query: 192 ECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARKTG 242
GD + +++ L N T E K+ P+ + +++ GG+ A+ RK G
Sbjct: 113 ---PGDELEVDLGAGILRNRTRDIEIKITPLPRVMLKILNDGGLAAHFRKYG 161
>gi|78043571|ref|YP_359952.1| 3-isopropylmalate dehydratase small subunit [Carboxydothermus
hydrogenoformans Z-2901]
gi|77995686|gb|ABB14585.1| 3-isopropylmalate dehydratase, small subunit family protein
[Carboxydothermus hydrogenoformans Z-2901]
Length = 165
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 99/177 (55%), Gaps = 22/177 (12%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYL--TLVPSNPDEYEKLGSYALIGLPATYTTRFIDENET 127
G C+ G++++TD II +Y TL + +L + + L + +
Sbjct: 3 LRGKCHKFGNDVNTDYIISGKYKFKTL------DMNELARHVMEDLDPDFYNKI------ 50
Query: 128 KTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG-EIYPLDSE 186
T I+AG NFGCGSSRE AP+A+ A AV+A+S+ARIF+RN++ TG + D+
Sbjct: 51 -TPGDFIVAGSNFGCGSSREQAPLAIKYAKIGAVIAKSFARIFYRNAINTGLPVIECDT- 108
Query: 187 ARLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARKTG 242
++ + GD + +++++ + N TTG++ +KP+ + + +++ GG+ + +K G
Sbjct: 109 ----DKINAGDELEVDLSKGIIRNLTTGEDIPIKPLPEVMIKILNDGGLIEHFKKYG 161
>gi|219850866|ref|YP_002465298.1| 3-isopropylmalate dehydratase small subunit [Methanosphaerula
palustris E1-9c]
gi|219545125|gb|ACL15575.1| 3-isopropylmalate dehydratase, small subunit [Methanosphaerula
palustris E1-9c]
Length = 165
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 94/169 (55%), Gaps = 24/169 (14%)
Query: 75 YVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKII 134
+ GD+IDTD IIP YL + + P+E + L A TR DE + K +
Sbjct: 4 WKFGDDIDTDAIIPGRYLII--NKPEE---------LALHAFEGTR--DEFAKEVKPGDV 50
Query: 135 IAG-GNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPL--DSEARLCE 191
+ G NFGCGSSREHAP+AL AG V+A ++ARIF+RN++ G + PL A++ +
Sbjct: 51 VVGEKNFGCGSSREHAPLALKGAGVRYVIAITFARIFYRNAINVG-LLPLVCPDAAKITD 109
Query: 192 ECSTGDVVTIEIAESRLINHTTGKEYKLKPI-GDLGPVIDAGGIFAYAR 239
+ +++++A + G Y+L+P+ + ++DAGG+ Y +
Sbjct: 110 KAE----ISVDLAAGTIT--ADGVAYRLEPVPAFMQEIVDAGGLVEYGK 152
>gi|156938035|ref|YP_001435831.1| 3-isopropylmalate dehydratase small subunit [Ignicoccus hospitalis
KIN4/I]
gi|156567019|gb|ABU82424.1| 3-isopropylmalate dehydratase, small subunit [Ignicoccus hospitalis
KIN4/I]
Length = 175
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 88/171 (51%), Gaps = 21/171 (12%)
Query: 77 VGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKIIIA 136
VGDNIDTD IIP YL + ++P E LG + + + R + I++A
Sbjct: 12 VGDNIDTDVIIPGRYL--IYTDP---ETLGKHCFEPIMPDFYQR-----SKELGGVIVVA 61
Query: 137 GGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEECSTG 196
G NFG GSSRE A VAL AG AVVAES+ARIF+RN + G P + + E G
Sbjct: 62 GKNFGMGSSREQAVVALKGAGVKAVVAESFARIFYRNCINQG--LPAVAVKGISEAVEEG 119
Query: 197 DVVTIEIAESRLINHTTGKEYKLKPIGD-------LGPVIDAGGIFAYARK 240
D V +++ ++ KE LK D L ++++GG+ Y +K
Sbjct: 120 DEVEVDLEGGKV--RVYDKEGNLKKEFDVPKLPPSLLEILESGGLVPYLKK 168
>gi|146303612|ref|YP_001190928.1| 3-isopropylmalate dehydratase small subunit [Metallosphaera sedula
DSM 5348]
gi|172046907|sp|A4YF02.1|LEUD_METS5 RecName: Full=3-isopropylmalate dehydratase small subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|145701862|gb|ABP95004.1| 3-isopropylmalate dehydratase, small subunit [Metallosphaera sedula
DSM 5348]
Length = 161
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/165 (36%), Positives = 87/165 (52%), Gaps = 17/165 (10%)
Query: 78 GDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKIIIAG 137
GD IDTD IIPA +L ++P L +A+ L + + +K +I+AG
Sbjct: 11 GDKIDTDIIIPARHLKY--TDP---AYLAQHAMEPLDPEFYKK-------ASKGVVIVAG 58
Query: 138 GNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEECSTGD 197
FG GSSRE A +AL AAG AV+AES+ARIF+RN + G PL + +E + GD
Sbjct: 59 KVFGMGSSREQAAIALKAAGVKAVIAESFARIFYRNCINNG--LPLITLPNATKEINEGD 116
Query: 198 VVTIEIAESRLINHTTGKEYKLKPIGDLG-PVIDAGGIFAYARKT 241
VV I + + G+ K K I + ++ +GGI Y +K
Sbjct: 117 VVKINVETGEI--TVNGRVLKGKGITGMALDILKSGGIMEYLKKV 159
>gi|258513918|ref|YP_003190140.1| 3-isopropylmalate dehydrogenase [Desulfotomaculum acetoxidans DSM
771]
gi|257777623|gb|ACV61517.1| 3-isopropylmalate dehydrogenase [Desulfotomaculum acetoxidans DSM
771]
Length = 523
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 86/171 (50%), Gaps = 19/171 (11%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
G + G +IDTD IIPA YL S+P E L + + ++ +
Sbjct: 3 LKGKAWKFGADIDTDAIIPARYLN--TSDPVE---LAKHCMEDADTSFAQKV-------Q 50
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
+I+A NFGCGSSREHAP+++ AG S V+A+S+ARIF+RN+ G P+
Sbjct: 51 PGDVIVADKNFGCGSSREHAPISIKYAGVSCVIAKSFARIFYRNAFNIG--LPILESTEA 108
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYK---LKPIGDLGPVIDAGGIFAY 237
E G+ V++ + N T G+ Y+ + P + +I AGG+ Y
Sbjct: 109 VEGIDEGNEVSVNAETGTITNVTKGETYQATVVPPF--MQQIIAAGGLINY 157
>gi|334339889|ref|YP_004544869.1| 3-isopropylmalate dehydratase small subunit [Desulfotomaculum
ruminis DSM 2154]
gi|334091243|gb|AEG59583.1| 3-isopropylmalate dehydratase, small subunit [Desulfotomaculum
ruminis DSM 2154]
Length = 169
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 98/176 (55%), Gaps = 20/176 (11%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYL--TLVPSNPDEYEKLGSYALIGLPATYTTRFIDENET 127
+ G C+ G++++TD II +Y TL + +L + + L + ++
Sbjct: 3 YQGKCHKFGNDVNTDYIISGKYKFKTL------DMNELAKHVMEDLDPDFYSKV------ 50
Query: 128 KTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEA 187
T I+AG NFGCGSSRE AP+A+ A AV+A+S+ARIF+RN++ TG + ++ +
Sbjct: 51 -TPGDFIVAGSNFGCGSSREQAPLAIKHANIGAVLAKSFARIFYRNAINTG-LPVIECDT 108
Query: 188 RLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARKTG 242
L + GD++ I++A +IN T + +KP+ + +++ GG+ + RK G
Sbjct: 109 DLID---AGDLLDIDLAGGVIINKTKDIKITVKPLPKVMITILNDGGLAPHFRKHG 161
>gi|289191526|ref|YP_003457467.1| 3-isopropylmalate dehydratase, small subunit [Methanocaldococcus
sp. FS406-22]
gi|288937976|gb|ADC68731.1| 3-isopropylmalate dehydratase, small subunit [Methanocaldococcus
sp. FS406-22]
Length = 165
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 90/170 (52%), Gaps = 20/170 (11%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
G + GD++DTD IIP YL + +L Y + G IDEN K
Sbjct: 3 IRGKAHKFGDDVDTDAIIPGPYLKTTDGH-----ELARYCMAG---------IDENFPKK 48
Query: 130 --KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEA 187
+ +I+AG NFGCGSSRE A +A+ G AV+A+S+ARIF+RN++ G I P+ ++
Sbjct: 49 VKEGDVIVAGENFGCGSSREQAVIAIKYCGIKAVIAKSFARIFYRNAINIGLI-PIIADT 107
Query: 188 RLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLGPVIDAGGIFAY 237
++ + GD+V +++ +++ P G ++DAGG+ Y
Sbjct: 108 ---DKINDGDIVEVDLDREKIVVDENLILDCEVPKGIEREILDAGGLINY 154
>gi|304320824|ref|YP_003854467.1| 3-isopropylmalate dehydratase [Parvularcula bermudensis HTCC2503]
gi|303299726|gb|ADM09325.1| 3-isopropylmalate dehydratase [Parvularcula bermudensis HTCC2503]
Length = 192
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/145 (38%), Positives = 75/145 (51%), Gaps = 25/145 (17%)
Query: 80 NIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENE---------TKTK 130
NIDTDQIIPA +LT + +G A RF D++E +
Sbjct: 20 NIDTDQIIPARFLTTTDRDG-----------LGEAAFRDWRFTDKDEPTDHVLNTVDRET 68
Query: 131 YKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSE---- 186
+KII+AG NFGCGSSREHA AL A G AV++ S+ IF N+ G + P++ +
Sbjct: 69 HKIIVAGDNFGCGSSREHAAWALTAYGVRAVISTSFGDIFKSNATKNG-LLPVEVDEAIL 127
Query: 187 ARLCEECSTGDVVTIEIAESRLINH 211
ARL E+ + +E AE R NH
Sbjct: 128 ARLLEDEGGEVTIDLEAAELRFGNH 152
>gi|253581260|ref|ZP_04858516.1| 3-isopropylmalate dehydratase [Ruminococcus sp. 5_1_39B_FAA]
gi|251847461|gb|EES75435.1| 3-isopropylmalate dehydratase [Ruminococcus sp. 5_1_39BFAA]
Length = 160
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 91/170 (53%), Gaps = 17/170 (10%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + +++DTDQII ++YL L+P N DE + +A L ++ +
Sbjct: 4 GTIFKFHNDLDTDQIIASQYL-LLP-NLDE---MKGHAFESLDPDFSKKV-------KPG 51
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
++ G NFGCGSSRE AP L A G AVVA+S+ARIF+RNS+ G P+ L +
Sbjct: 52 DFVVGGENFGCGSSREQAPGVLKALGVQAVVAKSFARIFYRNSINIG--LPVIVCKDLPD 109
Query: 192 ECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
E +TGD + + ++E + GK Y + + + +++ GG+ A K
Sbjct: 110 EVNTGDKMVLHMSEGTV--EANGKTYSCTKLPEYMQNILNQGGLIASLNK 157
>gi|317470389|ref|ZP_07929779.1| 3-isopropylmalate dehydratase [Anaerostipes sp. 3_2_56FAA]
gi|316902117|gb|EFV24041.1| 3-isopropylmalate dehydratase [Anaerostipes sp. 3_2_56FAA]
Length = 163
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/172 (38%), Positives = 98/172 (56%), Gaps = 18/172 (10%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
F G +V+GD+IDTD IIP EYL L P+ E + Y L ++ I E +
Sbjct: 4 FTGKVWVLGDDIDTDIIIPTEYLAL-PT----VEDMKQYGFSPLRPELASQ-IKEGD--- 54
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
II+AG NFGCGSSRE AP + A V+A+S+ARIFFRNS+ G + L ++
Sbjct: 55 ---IIVAGKNFGCGSSREQAPEIIKALKIKCVIAKSFARIFFRNSINNGLL--LIENDQI 109
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPI-GDLGPVIDAGGIFAYARK 240
E+ GD + + + ES I H + +EY ++P+ +L +I+AGG+ +K
Sbjct: 110 QEKVKEGDTLDVTLGES--IVHDS-REYPIQPLPQNLMDIIEAGGLVEAMKK 158
>gi|226356171|ref|YP_002785911.1| 3-isopropylmalate dehydratase small subunit [Deinococcus deserti
VCD115]
gi|259494356|sp|C1CVE0.1|LEUD_DEIDV RecName: Full=3-isopropylmalate dehydratase small subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|226318161|gb|ACO46157.1| putative 3-isopropylmalate dehydratase, small sununit
(Isopropylmalate isomerase) (Alpha-IPM isomerase)
[Deinococcus deserti VCD115]
Length = 181
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 81/162 (50%), Gaps = 15/162 (9%)
Query: 79 DNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKIIIAGG 138
D+I+TD+IIPA +LT D +L YA+ + R II+AG
Sbjct: 10 DHINTDEIIPARHLTT-----DIEAELAPYAMEDYDRDFAKRV-------QPGDIIVAGA 57
Query: 139 NFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEECSTGDV 198
+FGCGSSREHA AL AG AV+A ++ARI++RNS+ G L+ + + E GD
Sbjct: 58 DFGCGSSREHAVWALRGAGVGAVIAPNFARIYYRNSINNG-FLALECDG-IVEAFQDGDE 115
Query: 199 VTIEIAESRLINHTTGKEYKLKPIGDLG-PVIDAGGIFAYAR 239
+++ + N TG+ P+ V AGG Y R
Sbjct: 116 ANLDLKGGTITNLRTGQTLTFVPVPQFALDVQKAGGWLEYMR 157
>gi|156743456|ref|YP_001433585.1| 3-isopropylmalate dehydratase small subunit [Roseiflexus
castenholzii DSM 13941]
gi|156234784|gb|ABU59567.1| 3-isopropylmalate dehydratase, small subunit [Roseiflexus
castenholzii DSM 13941]
Length = 170
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 93/179 (51%), Gaps = 21/179 (11%)
Query: 67 TATFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENE 126
+ F G+ +V GDNIDTD+IIP +Y + + + L ++ L L + +R
Sbjct: 1 MSVFRGIAHVYGDNIDTDRIIPGKYTKTLDA-----QTLAAHVLEDLDPNFASRV----- 50
Query: 127 TKTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSE 186
+ +AG +FG GSSRE A +AL AG S V+A S+A IF+RN++ G PL
Sbjct: 51 --RPGDVFVAGYHFGAGSSREQAAIALKVAGISVVIARSFAGIFYRNAINIG--LPLVEA 106
Query: 187 ARLCEECSTGDVVTIEIAESRLINHTTGKEY---KLKPIGDLGPVIDAGGIFAYARKTG 242
G V +++ + +++ T+G Y ++ P+ + ++ AGG+ Y R+ G
Sbjct: 107 PD--HAILDGHCVWVDLEQGLVVDETSGCVYRSARMPPV--MVAILRAGGLVNYLRQYG 161
>gi|114565933|ref|YP_753087.1| 3-isopropylmalate dehydratase small subunit family protein
[Syntrophomonas wolfei subsp. wolfei str. Goettingen]
gi|114336868|gb|ABI67716.1| 3-isopropylmalate dehydratase, small subunit [Syntrophomonas wolfei
subsp. wolfei str. Goettingen]
Length = 166
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/177 (35%), Positives = 95/177 (53%), Gaps = 26/177 (14%)
Query: 72 GLCYVVGDNIDTDQIIPA--EYLTLVPSNPDEYEKLGSYALIGL-PATYTTRFIDENETK 128
G + GD+++TD II ++ TL + ++L Y + L P Y N+ K
Sbjct: 5 GQVHKFGDDVNTDYIISGRHKFKTL------DMKELAKYVMEDLDPEFY-------NKVK 51
Query: 129 TKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEAR 188
I+AG NFGCGSSRE AP+A+ A SAVVA+S+ARIF+RN + TG PL
Sbjct: 52 AG-DFIVAGSNFGCGSSREQAPLAIINANISAVVAKSFARIFYRNCINTG--LPLIE--- 105
Query: 189 LC--EECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARKTG 242
C E+ GD + +++ + L N + G E + P+ D + ++ GG+ + +K G
Sbjct: 106 -CDTEQIDEGDELEVDLQKGVLYNRSKGIEIAITPLPDVMLKILSDGGLVEHFKKYG 161
>gi|269216666|ref|ZP_06160520.1| 3-isopropylmalate dehydratase, small subunit [Slackia exigua ATCC
700122]
gi|402828419|ref|ZP_10877307.1| 3-isopropylmalate dehydratase, small subunit [Slackia sp. CM382]
gi|269129900|gb|EEZ60983.1| 3-isopropylmalate dehydratase, small subunit [Slackia exigua ATCC
700122]
gi|402286502|gb|EJU34973.1| 3-isopropylmalate dehydratase, small subunit [Slackia sp. CM382]
Length = 169
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 89/166 (53%), Gaps = 15/166 (9%)
Query: 71 HGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTK 130
G + GDN+DTD IIPA YL + ++P E L ++A+ + A + +
Sbjct: 4 QGTVFKYGDNVDTDVIIPARYLNI--ADPAE---LATHAMEDIDADFV-------KNMKP 51
Query: 131 YKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLC 190
II+A NFGCGSSREHAP + G + V+A S+ARIF+RN++ G P+ A
Sbjct: 52 GDIIVATKNFGCGSSREHAPRVIKDNGVACVIASSFARIFYRNAINIG--LPILECAEAA 109
Query: 191 EECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIF 235
E GD V ++ + + + TTG ++ P + + +ID G+F
Sbjct: 110 EAIEAGDEVAVDFSTGVIEDLTTGATFQALPFPEFIQNIIDHDGLF 155
>gi|414155035|ref|ZP_11411351.1| 3-isopropylmalate dehydratase small subunit 2 [Desulfotomaculum
hydrothermale Lam5 = DSM 18033]
gi|411453348|emb|CCO09255.1| 3-isopropylmalate dehydratase small subunit 2 [Desulfotomaculum
hydrothermale Lam5 = DSM 18033]
Length = 166
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 97/176 (55%), Gaps = 20/176 (11%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYL--TLVPSNPDEYEKLGSYALIGLPATYTTRFIDENET 127
F G + G++++TD II +Y TL + +L + + L + ++ +
Sbjct: 3 FSGKAHKFGNDVNTDYIISGKYKFKTL------DMNELAKHVMEDLDPDFYSKVAPGD-- 54
Query: 128 KTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEA 187
I+AG NFGCGSSRE AP+A+ A SAV+A+S+ARIF+RN++ TG + L+ +
Sbjct: 55 -----FIVAGSNFGCGSSREQAPLAIKHAHISAVLAKSFARIFYRNAINTG-LPVLECDT 108
Query: 188 RLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARKTG 242
L E GD++ +++A +IN T +KP+ + +++ GG+ + RK G
Sbjct: 109 DLIE---AGDILDVDLAGGYIINRTKDIRLAVKPLPQVMIKILNDGGLAPHFRKYG 161
>gi|312880613|ref|ZP_07740413.1| 3-isopropylmalate dehydratase, small subunit [Aminomonas
paucivorans DSM 12260]
gi|310783904|gb|EFQ24302.1| 3-isopropylmalate dehydratase, small subunit [Aminomonas
paucivorans DSM 12260]
Length = 175
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 91/178 (51%), Gaps = 18/178 (10%)
Query: 68 ATFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENET 127
A G +V GD++DTD I +YL ++P +K+ Y+ P F E +
Sbjct: 4 AILRGKAWVFGDDVDTDLIYHNKYLA--ETDP---KKMAQYSFEYYPGK--EHFAKEVKP 56
Query: 128 KTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPL---- 183
++AG NFG GSSREHA L G V+AE+YARI++RN++ G YP+
Sbjct: 57 GD---FVVAGRNFGTGSSREHAVYCLKEIGVPVVLAENYARIYYRNAINNG--YPVLFVN 111
Query: 184 -DSEARLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDL-GPVIDAGGIFAYAR 239
S+A + GD + +++A R+ N T G E+ + DL ++ AGG+ Y +
Sbjct: 112 GMSDAIKAGKIQDGDELEVDLATGRIKNVTKGTEFHGDAVTDLEKDIMGAGGLIEYLK 169
>gi|159899820|ref|YP_001546067.1| 3-isopropylmalate dehydratase small subunit [Herpetosiphon
aurantiacus DSM 785]
gi|159892859|gb|ABX05939.1| 3-isopropylmalate dehydratase, small subunit [Herpetosiphon
aurantiacus DSM 785]
Length = 165
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 86/168 (51%), Gaps = 14/168 (8%)
Query: 75 YVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKII 134
+V G++++TDQ++P Y + D+ + YA I + +I
Sbjct: 5 WVFGNDVNTDQMVPGRYAPYMLGANDDVRR---YAFIEARPDFAP-------NVQPGDLI 54
Query: 135 IAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEECS 194
IAG NFGCGSSRE+AP+AL G A++A +ARIFFRN++ G P + A L E+ +
Sbjct: 55 IAGPNFGCGSSREYAPLALKRCGVGAIIAPLFARIFFRNALNLG--IPCFT-ADLREQVA 111
Query: 195 TGDVVTIEIAESRLINHTTGKEYKLKPIGDLGPVIDAGGIFAYARKTG 242
GD V ++A + N+ + P G + V GGI + R+ G
Sbjct: 112 DGDFVDFDLAAGLITNNANQIQLP-PPEGWMREVWAEGGIVPFYRRHG 158
>gi|70606092|ref|YP_254962.1| 3-isopropylmalate dehydratase small subunit [Sulfolobus
acidocaldarius DSM 639]
gi|449066293|ref|YP_007433375.1| 3-isopropylmalate dehydratase small subunit [Sulfolobus
acidocaldarius N8]
gi|449068569|ref|YP_007435650.1| 3-isopropylmalate dehydratase small subunit [Sulfolobus
acidocaldarius Ron12/I]
gi|76363222|sp|Q4JC10.1|LEUD_SULAC RecName: Full=3-isopropylmalate dehydratase small subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|68566740|gb|AAY79669.1| 3-isopropylmalate dehydratase small subunit [Sulfolobus
acidocaldarius DSM 639]
gi|449034801|gb|AGE70227.1| 3-isopropylmalate dehydratase small subunit [Sulfolobus
acidocaldarius N8]
gi|449037077|gb|AGE72502.1| 3-isopropylmalate dehydratase small subunit [Sulfolobus
acidocaldarius Ron12/I]
Length = 161
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 87/175 (49%), Gaps = 38/175 (21%)
Query: 78 GDNIDTDQIIPAEYL-----------TLVPSNPDEYEKLGSYALIGLPATYTTRFIDENE 126
GD IDTD IIPA+YL + P +P+ Y+K S
Sbjct: 11 GDKIDTDIIIPAKYLKYTDPQYLAQHAMEPLDPEFYKKASSGV----------------- 53
Query: 127 TKTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSE 186
II+AG FG GSSRE A +AL AAG A++AES+ARIFFRN++ G P+ +
Sbjct: 54 ------IIVAGKVFGMGSSREQAAMALKAAGVKAIIAESFARIFFRNAINNG--LPVITL 105
Query: 187 ARLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLG-PVIDAGGIFAYARK 240
+E + GD+V + + ++ + + K K K I + ++ GG+ Y +K
Sbjct: 106 QNATKEINQGDLVRVNVETGEIVVNGS-KVLKGKGISGMPLEILITGGLITYLKK 159
>gi|332797747|ref|YP_004459247.1| 3-isopropylmalate dehydratase small subunit [Acidianus hospitalis
W1]
gi|332695482|gb|AEE94949.1| 3-isopropylmalate dehydratase, small subunit [Acidianus hospitalis
W1]
Length = 154
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 86/175 (49%), Gaps = 41/175 (23%)
Query: 78 GDNIDTDQIIPAEYL-----------TLVPSNPDEYEKLGSYALIGLPATYTTRFIDENE 126
GD IDTD IIPA YL + P +P+ Y+K S
Sbjct: 4 GDKIDTDVIIPARYLKYTDPQYLAQHAMEPLDPEFYKKASSGV----------------- 46
Query: 127 TKTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG-EIYPLDS 185
+I+AG FG GSSRE A +AL AAG A++AES+ARIF+RN++ G + L
Sbjct: 47 ------VIVAGKVFGMGSSREQAAIALKAAGVKAIIAESFARIFYRNAINNGLPVITLKD 100
Query: 186 EARLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLG-PVIDAGGIFAYAR 239
+L +E G++V I + + G++Y+ K I + ++ +GGI Y +
Sbjct: 101 ATKLIDE---GEIVRINVETGEI--EVNGRKYQGKGISGMALEILKSGGIMEYLK 150
>gi|327401140|ref|YP_004341979.1| 3-isopropylmalate dehydratase small subunit [Archaeoglobus
veneficus SNP6]
gi|327316648|gb|AEA47264.1| 3-isopropylmalate dehydratase small subunit [Archaeoglobus
veneficus SNP6]
Length = 165
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 83/179 (46%), Gaps = 26/179 (14%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
G + GD+I TD I P Y L + LP D N
Sbjct: 3 LKGRAWKFGDDISTDHITPGRYYHLRSN---------------LPELAKHVMEDANPDFA 47
Query: 130 KY----KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG-EIYPLD 184
K I+AG NFGCGSSREHAP + AG SAV+A+S+ARIF+RN++ G + +D
Sbjct: 48 KLVKPGDFIVAGKNFGCGSSREHAPRVIKLAGVSAVLAKSFARIFYRNAINIGLPLLIVD 107
Query: 185 SEARLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARKTG 242
+ GD + + ++ + N T G +P+ D + ++ GG+ Y +K G
Sbjct: 108 TNG-----IDEGDQLEVNLSTGEVKNLTKGTSISARPLPDVMIRILQEGGLVNYVKKYG 161
>gi|124485061|ref|YP_001029677.1| hypothetical protein Mlab_0234 [Methanocorpusculum labreanum Z]
gi|124362602|gb|ABN06410.1| 3-isopropylmalate dehydratase, small subunit [Methanocorpusculum
labreanum Z]
Length = 158
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 89/178 (50%), Gaps = 33/178 (18%)
Query: 72 GLCYVVGDNIDTDQIIPAEYL------TLVPSNPDEYEKLGSYALIGLPATYTTRFIDEN 125
G V+G+++DTD II YL V ++Y+K + L G
Sbjct: 5 GHAVVIGEDVDTDMIIAGRYLRTIDRSVWVEHAFEDYDKSIAGRLNG------------- 51
Query: 126 ETKTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDS 185
+++AG N GCGSSRE A AL AG AVVA S+ARIFFRN V G +Y ++
Sbjct: 52 ------AVLVAGKNIGCGSSREQAAAALKEAGVRAVVAPSFARIFFRNCVNLG-LYVFEA 104
Query: 186 EARLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARKTG 242
+ C GD+++ + +S + T+ Y+ KP+ + + ++ AGG+ AY G
Sbjct: 105 DV----VCENGDIISFDTDDSYV--KTSNAVYQAKPLSNRMKEILSAGGLNAYLSMQG 156
>gi|147669071|ref|YP_001213889.1| 3-isopropylmalate dehydratase small subunit [Dehalococcoides sp.
BAV1]
gi|289432340|ref|YP_003462213.1| 3-isopropylmalate dehydratase small subunit [Dehalococcoides sp.
GT]
gi|452203297|ref|YP_007483430.1| 3-isopropylmalate dehydratase, small subunit [Dehalococcoides
mccartyi DCMB5]
gi|452204733|ref|YP_007484862.1| aconitase/homoaconitase C-terminal domain protein
/3-isopropylmalate dehydratase, small subunit
[Dehalococcoides mccartyi BTF08]
gi|146270019|gb|ABQ17011.1| 3-isopropylmalate dehydratase, small subunit [Dehalococcoides sp.
BAV1]
gi|288946060|gb|ADC73757.1| 3-isopropylmalate dehydratase, small subunit [Dehalococcoides sp.
GT]
gi|452110356|gb|AGG06088.1| 3-isopropylmalate dehydratase, small subunit [Dehalococcoides
mccartyi DCMB5]
gi|452111789|gb|AGG07520.1| aconitase/homoaconitase C-terminal domain protein
/3-isopropylmalate dehydratase, small subunit
[Dehalococcoides mccartyi BTF08]
Length = 167
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 90/179 (50%), Gaps = 24/179 (13%)
Query: 69 TFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETK 128
G + GD+I TD I P + L + P+ L + L T+ R
Sbjct: 1 MLKGKAFKFGDSISTDHIAPGRLVHLRSNLPE----LAKHVLEDADPTFAQRV------- 49
Query: 129 TKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEAR 188
++AG NFG GSSREHAP+ + AG SAV+A+S ARIFFRN++ G P+
Sbjct: 50 KPGDFVVAGNNFGLGSSREHAPLIIKMAGVSAVMAKSVARIFFRNAINLG--LPI----L 103
Query: 189 LC--EECSTGDVVTIEIAESRLINHTTGKEY---KLKPIGDLGPVIDAGGIFAYARKTG 242
+C ++ + GD + +++ ++ + T G E K+ P + ++D GG+ Y +K G
Sbjct: 104 ICDTDKIAEGDELEVDLDGGKIYDRTNGAELTFGKIPPA--MLKILDEGGVMPYIKKYG 160
>gi|357420390|ref|YP_004933382.1| 3-isopropylmalate dehydratase small subunit [Thermovirga lienii DSM
17291]
gi|355397856|gb|AER67285.1| 3-isopropylmalate dehydratase, small subunit [Thermovirga lienii
DSM 17291]
Length = 172
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 86/173 (49%), Gaps = 17/173 (9%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
G +V GD++DTD I +YL + ++P E + Y+ P EN K
Sbjct: 6 LRGRAWVFGDDVDTDLIYHNKYLAI--TDPKE---MAQYSFEYYPGK-------ENFAKE 53
Query: 130 KY--KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEA 187
++AG NFGCGSSREHA L G ++AESYARI++RN+V G YP+
Sbjct: 54 AKPGDFVVAGQNFGCGSSREHAVYCLKELGIPVILAESYARIYYRNAVNNG--YPVLVVP 111
Query: 188 RLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLGPVIDA-GGIFAYAR 239
+ ++ GD + + + + N TTG+ + DL I A GG+ Y +
Sbjct: 112 NITKKVKDGDELEVNLDTGEIKNLTTGEVMHGDAVTDLEKEIMAYGGLIPYLK 164
>gi|355670917|ref|ZP_09057564.1| hypothetical protein HMPREF9469_00601 [Clostridium citroniae
WAL-17108]
gi|354815833|gb|EHF00423.1| hypothetical protein HMPREF9469_00601 [Clostridium citroniae
WAL-17108]
Length = 160
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 91/170 (53%), Gaps = 17/170 (10%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + +++DTDQII ++YL L+P+ +++ + L + + + +
Sbjct: 4 GTIFKFHNDLDTDQIIASQYL-LLPT----IDEMKVHTFESLDPDFPQKVKEGD------ 52
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
++ G NFGCGSSRE AP L A G AVVA+S+ARIF+RNS+ G P+ L +
Sbjct: 53 -YVVGGENFGCGSSREQAPSVLKALGVKAVVAKSFARIFYRNSINIG--LPVIVCKELPD 109
Query: 192 ECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
E TGD + + ++E + GKEY + + + +++ GG+ A K
Sbjct: 110 EVETGDAMELSLSEG--VARANGKEYPCTRLPEYMQNILNQGGLIASLNK 157
>gi|333979107|ref|YP_004517052.1| 3-isopropylmalate dehydratase small subunit [Desulfotomaculum
kuznetsovii DSM 6115]
gi|333822588|gb|AEG15251.1| 3-isopropylmalate dehydratase small subunit [Desulfotomaculum
kuznetsovii DSM 6115]
Length = 166
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 94/179 (52%), Gaps = 26/179 (14%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
G + GD+++TD II +Y + +L + + L + + I+ +
Sbjct: 3 LQGKAHKFGDDVNTDYIISGKY----KFKTLDMRELAKHVMEDLDPDFYQK-INAGD--- 54
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
I+AG NFGCGSSRE AP+A+ AG SAV+A+S+ARIFFRN++ TG P+
Sbjct: 55 ---FIVAGRNFGCGSSREQAPLAIKYAGISAVLAKSFARIFFRNAINTG--LPV------ 103
Query: 190 CEECST-----GDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARKTG 242
EC T GD + ++++ + N T G KP+ + +++ GG+ A+ RK G
Sbjct: 104 -VECDTDRIEPGDELMVDLSTGVITNKTKGLTIAAKPLPPVMIKILNDGGLVAHFRKYG 161
>gi|297624426|ref|YP_003705860.1| 3-isopropylmalate dehydratase small subunit [Truepera radiovictrix
DSM 17093]
gi|297165606|gb|ADI15317.1| 3-isopropylmalate dehydratase, small subunit [Truepera radiovictrix
DSM 17093]
Length = 198
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/146 (37%), Positives = 76/146 (52%), Gaps = 25/146 (17%)
Query: 75 YVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTK---- 130
+V GD+IDTD+IIPA ++ V ++ LG Y Y RF ++ K
Sbjct: 15 FVPGDDIDTDRIIPARFMKCV-----TFDGLGQYMF------YDVRFHEDGTPKDHPLND 63
Query: 131 -----YKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDS 185
++++G NFGCGSSREHAP A+ G AVVAES+A IFF NSV G +
Sbjct: 64 PRFAGASVLLSGENFGCGSSREHAPQAMYRFGIRAVVAESFAEIFFGNSVTLGMPCVTAT 123
Query: 186 EARLCE-----ECSTGDVVTIEIAES 206
A++ E E VT+++A S
Sbjct: 124 RAQIAEMARLIETDPQTPVTVDVANS 149
>gi|227826667|ref|YP_002828446.1| 3-isopropylmalate dehydratase small subunit [Sulfolobus islandicus
M.14.25]
gi|238618753|ref|YP_002913578.1| 3-isopropylmalate dehydratase small subunit [Sulfolobus islandicus
M.16.4]
gi|385772285|ref|YP_005644851.1| 3-isopropylmalate dehydratase small subunit [Sulfolobus islandicus
HVE10/4]
gi|385775000|ref|YP_005647568.1| 3-isopropylmalate dehydratase small subunit [Sulfolobus islandicus
REY15A]
gi|259494460|sp|C4KKU5.1|LEUD_SULIK RecName: Full=3-isopropylmalate dehydratase small subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|259494462|sp|C3MUB4.1|LEUD_SULIM RecName: Full=3-isopropylmalate dehydratase small subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|227458462|gb|ACP37148.1| 3-isopropylmalate dehydratase, small subunit [Sulfolobus islandicus
M.14.25]
gi|238379822|gb|ACR40910.1| 3-isopropylmalate dehydratase, small subunit [Sulfolobus islandicus
M.16.4]
gi|323473748|gb|ADX84354.1| 3-isopropylmalate dehydratase, small subunit [Sulfolobus islandicus
REY15A]
gi|323476399|gb|ADX81637.1| 3-isopropylmalate dehydratase, small subunit [Sulfolobus islandicus
HVE10/4]
Length = 165
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/172 (36%), Positives = 90/172 (52%), Gaps = 18/172 (10%)
Query: 78 GDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKIIIAG 137
GD IDTD IIPA YL ++P + L +A+ L + + +K II+AG
Sbjct: 11 GDKIDTDIIIPARYLKY--TDP---QYLAQHAMEPLDPEFYKK-------ASKGVIIVAG 58
Query: 138 GNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEECSTGD 197
FG GSSRE A +AL AAG AVVAES+ARIF+RN++ G P+ + +E
Sbjct: 59 KVFGMGSSREQAAIALKAAGVKAVVAESFARIFYRNAINNG--LPVITLPNSTKEIDENS 116
Query: 198 VVTIEIAESRLINHTTGKEYKLKPIGDLG-PVIDAGGIFAYARKTGMIASRN 248
V I++ ++ K K K I + ++ AGGI Y +K + +RN
Sbjct: 117 YVKIDVETGEIL--VGNKVLKGKGITGMALEILQAGGIMEYLKKMQTV-NRN 165
>gi|340754434|ref|ZP_08691189.1| 3-isopropylmalate dehydratase, small subunit [Fusobacterium sp.
2_1_31]
gi|422314899|ref|ZP_16396350.1| 3-isopropylmalate dehydratase, small subunit [Fusobacterium
periodonticum D10]
gi|229423945|gb|EEO38992.1| 3-isopropylmalate dehydratase, small subunit [Fusobacterium sp.
2_1_31]
gi|404593196|gb|EKA94795.1| 3-isopropylmalate dehydratase, small subunit [Fusobacterium
periodonticum D10]
Length = 191
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 84/162 (51%), Gaps = 18/162 (11%)
Query: 65 EPTATFHG-LCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYT---TR 120
+P F G + ++ DNIDTDQ+IP +YL EK G + Y +
Sbjct: 2 KPFIKFEGTIVPIMNDNIDTDQLIPKQYLKST-------EKTGFGKYLFDEWRYNEDGSD 54
Query: 121 FIDENETKTKYK---IIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVAT 177
+D N K++YK I+I G NFGCGSSREHA AL G +VA Y+ IF+ N +
Sbjct: 55 NLDFNLNKSEYKKGTILITGDNFGCGSSREHAAWALQDYGFHVIVAGGYSGIFYMNWLNN 114
Query: 178 GEI-YPLDSEARLCEECSTGD-VVTIEIAESRLINHTTGKEY 217
G + L E RL GD V+T+++ ++L T GK+Y
Sbjct: 115 GHLPITLSKEERLELSKLPGDTVITVDLENNKL--STNGKDY 154
>gi|229583291|ref|YP_002841690.1| 3-isopropylmalate dehydratase small subunit [Sulfolobus islandicus
Y.N.15.51]
gi|259494463|sp|C3NMW1.1|LEUD_SULIN RecName: Full=3-isopropylmalate dehydratase small subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|228014007|gb|ACP49768.1| 3-isopropylmalate dehydratase, small subunit [Sulfolobus islandicus
Y.N.15.51]
Length = 165
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/172 (36%), Positives = 90/172 (52%), Gaps = 18/172 (10%)
Query: 78 GDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKIIIAG 137
GD IDTD IIPA YL ++P + L + + L + + +K II+AG
Sbjct: 11 GDKIDTDIIIPARYLKY--TDP---QYLAQHVMEPLDPEFYKK-------ASKGVIIVAG 58
Query: 138 GNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEECSTGD 197
FG GSSRE A +AL AAG AVVAES+ARIF+RN++ G P+ + +E
Sbjct: 59 KVFGMGSSREQAAIALKAAGVKAVVAESFARIFYRNAINNG--LPVITLPNSTKEIDENS 116
Query: 198 VVTIEIAESRLINHTTGKEYKLKPIGDLG-PVIDAGGIFAYARKTGMIASRN 248
V I++ ++ K K K I ++ ++ AGGI Y +K + +RN
Sbjct: 117 YVKIDVETGEIL--VGNKVLKGKGITEMALEILQAGGIMEYLKKMQTV-NRN 165
>gi|294102685|ref|YP_003554543.1| 3-isopropylmalate dehydratase small subunit [Aminobacterium
colombiense DSM 12261]
gi|293617665|gb|ADE57819.1| 3-isopropylmalate dehydratase, small subunit [Aminobacterium
colombiense DSM 12261]
Length = 167
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 88/178 (49%), Gaps = 31/178 (17%)
Query: 71 HGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTK 130
G ++ GDNI+TD II +Y + + ++
Sbjct: 3 QGRAHIFGDNINTDYIIAGKYTKTLDH-----------------TVWVEHLFEDISPGFS 45
Query: 131 YKI-----IIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDS 185
KI ++AG NFGCGSSRE APVAL AG AV+A+S+ARIFFRN++ G
Sbjct: 46 KKIQPGDFVVAGRNFGCGSSREQAPVALKYAGVGAVLAKSFARIFFRNAINLG------V 99
Query: 186 EARLC--EECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
+C ++ D + I+++ R+ N TT + ++P+ D + ++ AGG+ Y ++
Sbjct: 100 PVIVCNTDDIHDLDQLRIDLSTQRIFNLTTNQIIPMEPLPDVMIRILSAGGLTPYLKQ 157
>gi|156743411|ref|YP_001433540.1| homoaconitate hydratase small subunit [Roseiflexus castenholzii DSM
13941]
gi|156234739|gb|ABU59522.1| 3-isopropylmalate dehydratase, small subunit [Roseiflexus
castenholzii DSM 13941]
Length = 166
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/168 (36%), Positives = 87/168 (51%), Gaps = 16/168 (9%)
Query: 74 CYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKI 133
+ G NI+TDQI+P Y + N DE L +Y I + + T +
Sbjct: 4 IWRFGANINTDQIVPGRYAPYMLKNEDE---LRNYPFIEARPEFAS-------TVRPGDL 53
Query: 134 IIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEEC 193
IIAG NFGCGSSRE+AP+AL G A++A +ARIF+RN++ G PL EA L ++
Sbjct: 54 IIAGPNFGCGSSREYAPLALKMVGIGAIIAPLFARIFYRNALNLG--IPL-FEADLTDQL 110
Query: 194 STGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
G V AE+ +I G+ +L P + + V GGI + RK
Sbjct: 111 EDGQEVEFN-AETGVI-VADGRAIQLPPPPEWMREVWREGGIVPFYRK 156
>gi|225175379|ref|ZP_03729374.1| aconitate hydratase domain protein [Dethiobacter alkaliphilus AHT
1]
gi|225169131|gb|EEG77930.1| aconitate hydratase domain protein [Dethiobacter alkaliphilus AHT
1]
Length = 174
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 93/182 (51%), Gaps = 20/182 (10%)
Query: 69 TFHG-LCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYAL--IGLPATYTTRFIDEN 125
TF G + ++ +I+TD+IIPA+YLT + E L Y L + LP T I++
Sbjct: 3 TFSGKVLFLDRSDINTDEIIPAKYLTEITK-----EALKPYLLEDLTLPGFNNTEDINDK 57
Query: 126 ETKTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEI---YP 182
+I+ NFGCGSSREHAP AL G + V+AES+ARIF +N G + P
Sbjct: 58 ------AVIVTRANFGCGSSREHAPWALEVNGINVVIAESFARIFRQNMYNCGMLAIELP 111
Query: 183 LDSEARLCEECSTGDV-VTIEIAESRLINHTTGKEYKLK-PIGDLGP-VIDAGGIFAYAR 239
D L E S D +TI+I ++I + K ++ +G+ ++ GG YA
Sbjct: 112 EDKIDYLFENYSGKDTSITIDIENDKIIVTSADKSEEIPFKVGEFAKTLVKEGGWVGYAD 171
Query: 240 KT 241
K
Sbjct: 172 KN 173
>gi|229583831|ref|YP_002842332.1| 3-isopropylmalate dehydratase small subunit [Sulfolobus islandicus
M.16.27]
gi|259494459|sp|C3N1A2.1|LEUD_SULIA RecName: Full=3-isopropylmalate dehydratase small subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|228018880|gb|ACP54287.1| 3-isopropylmalate dehydratase, small subunit [Sulfolobus islandicus
M.16.27]
Length = 165
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/172 (36%), Positives = 90/172 (52%), Gaps = 18/172 (10%)
Query: 78 GDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKIIIAG 137
GD IDTD IIPA YL ++P + L +A+ L + + +K II+AG
Sbjct: 11 GDKIDTDIIIPARYLKY--TDP---QYLAQHAMEPLDPEFYKK-------ASKGVIIVAG 58
Query: 138 GNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEECSTGD 197
FG GSSRE A +AL AAG AVVAES+ARIF+RN++ G P+ + +E
Sbjct: 59 KVFGMGSSREQAAIALKAAGVKAVVAESFARIFYRNAINNG--LPVITLPNSTKEIDESS 116
Query: 198 VVTIEIAESRLINHTTGKEYKLKPIGDLG-PVIDAGGIFAYARKTGMIASRN 248
V I++ ++ K K K I + ++ AGGI Y +K + +RN
Sbjct: 117 YVKIDVETGEIL--VGNKVLKGKGITGMALEILQAGGIMEYLKKMQTV-NRN 165
>gi|432328815|ref|YP_007246959.1| 3-isopropylmalate dehydratase, small subunit [Aciduliprofundum sp.
MAR08-339]
gi|432135524|gb|AGB04793.1| 3-isopropylmalate dehydratase, small subunit [Aciduliprofundum sp.
MAR08-339]
Length = 162
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 86/172 (50%), Gaps = 13/172 (7%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + GD+++TD I P +Y + S+ E++ S+AL L + E
Sbjct: 2 GRVWKYGDDVNTDVIFPGKYTYKIMSD----EEMASHALEDLDPDFA-------ENVKPG 50
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
+I+AG N+G GSSRE A L AAG A++AES+ARI++RN + G + + + E
Sbjct: 51 DVIVAGKNWGYGSSREQAVKCLKAAGIKAIIAESFARIYYRNCINLG-LPAITLKKEDIE 109
Query: 192 ECSTGDVVTIEIAESRLINHTTGKEYKLKPI-GDLGPVIDAGGIFAYARKTG 242
GD V ++I + N T P G + +I AGGI Y RK G
Sbjct: 110 RFDAGDEVELDIERGIIENKTKDFVIHFPPFEGYVMDIIRAGGIIEYIRKQG 161
>gi|134300176|ref|YP_001113672.1| 3-isopropylmalate dehydratase small subunit [Desulfotomaculum
reducens MI-1]
gi|134052876|gb|ABO50847.1| 3-isopropylmalate dehydratase, small subunit [Desulfotomaculum
reducens MI-1]
Length = 166
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 96/176 (54%), Gaps = 20/176 (11%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYL--TLVPSNPDEYEKLGSYALIGLPATYTTRFIDENET 127
F G + ++++TD II +Y TL + +L + + L + ++
Sbjct: 3 FQGKSHKFDNDVNTDYIISGKYKFKTL------DMNELAKHVMEDLDPDFYSKV------ 50
Query: 128 KTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEA 187
T I+AG NFGCGSSRE AP+A+ A SAV+A+S+ARIF+RN++ TG + L+ +
Sbjct: 51 -TPGDFIVAGSNFGCGSSREQAPLAIKHANISAVLAKSFARIFYRNAINTG-LPVLECDT 108
Query: 188 RLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARKTG 242
L + GD++ +++ +IN T + +KP+ + +++ GG+ + RK G
Sbjct: 109 DLID---PGDLLDVDLTNGVIINRTKDLKISVKPLPQVMIKILNDGGLAPHFRKYG 161
>gi|170290584|ref|YP_001737400.1| 3-isopropylmalate dehydratase small subunit [Candidatus Korarchaeum
cryptofilum OPF8]
gi|170174664|gb|ACB07717.1| 3-isopropylmalate dehydratase, small subunit [Candidatus
Korarchaeum cryptofilum OPF8]
Length = 164
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 85/172 (49%), Gaps = 17/172 (9%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + +GD+I TD IIP + + E + Y L + +E+
Sbjct: 4 GRVWRLGDDITTDHIIPGR----LKYSSGSLEDMKKYVFNDLIPNF-------HESVKPG 52
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
+I+AG NFG GSSREHA L G AV+A S+ARIF+RN+V G P+ EA +
Sbjct: 53 DVIVAGKNFGYGSSREHAARLLKIVGIGAVIASSFARIFYRNAVNVG--LPV-IEAEI-- 107
Query: 192 ECSTGDVVTIEIAESRLINHTTGKEYKLKPI-GDLGPVIDAGGIFAYARKTG 242
E D+V + + E ++ N T + KP ++ + + GGI Y R+ G
Sbjct: 108 EADQWDIVKVHLEEGKIENITKSLVFTFKPFPREILEIFEEGGIVEYFRRRG 159
>gi|294056336|ref|YP_003549994.1| 3-isopropylmalate dehydratase small subunit [Coraliomargarita
akajimensis DSM 45221]
gi|293615669|gb|ADE55824.1| 3-isopropylmalate dehydratase, small subunit [Coraliomargarita
akajimensis DSM 45221]
Length = 200
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 46/107 (42%), Positives = 64/107 (59%), Gaps = 8/107 (7%)
Query: 75 YVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYK-- 132
+V GD+IDTD+IIPA ++ + ++ LG Y + T + N +++
Sbjct: 15 FVPGDDIDTDRIIPARFMKCIT-----FDGLGEYFFYDVRKTESGEDKPHNLNDARFQGA 69
Query: 133 -IIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG 178
II++G NFGCGSSREHAP A+ AG +AVVA S+A IFF NS G
Sbjct: 70 SIIVSGNNFGCGSSREHAPQAIMRAGFNAVVAGSFAEIFFGNSTNLG 116
>gi|354610393|ref|ZP_09028349.1| 3-isopropylmalate dehydratase, small subunit [Halobacterium sp.
DL1]
gi|353195213|gb|EHB60715.1| 3-isopropylmalate dehydratase, small subunit [Halobacterium sp.
DL1]
Length = 202
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 48/112 (42%), Positives = 64/112 (57%), Gaps = 20/112 (17%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT------ 129
V G++IDTDQIIPA +L +V ++ LG +A + RF D++E K
Sbjct: 18 VRGNDIDTDQIIPARFLKVVT-----FDGLGQFAF------FDQRFTDDDEQKDHPFNEE 66
Query: 130 KYK---IIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG 178
+Y+ ++ NFGCGSSREHAP AL G AVV ES+A IF N +A G
Sbjct: 67 RYQGASVLAVNANFGCGSSREHAPQALMRWGIDAVVGESFAEIFAGNCLALG 118
>gi|295108507|emb|CBL22460.1| 3-isopropylmalate dehydratase, small subunit [Ruminococcus obeum
A2-162]
Length = 163
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 67/172 (38%), Positives = 90/172 (52%), Gaps = 18/172 (10%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
F G +V+GD+IDTD IIP EYL L + + Y L +
Sbjct: 4 FTGKVWVLGDDIDTDIIIPTEYLAL-----KTIDDMKQYGFSPLRPELAGQI-------Q 51
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
K II+AG NFGCGSSRE AP + A G V+A+S+ARIFFRNS+ G + L + L
Sbjct: 52 KGDIIVAGKNFGCGSSREQAPEIIKALGIQCVIAKSFARIFFRNSINNGLL--LIEQPDL 109
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPI-GDLGPVIDAGGIFAYARK 240
E+ GD VT+ + E N GK+Y + + +L +I AGG+ RK
Sbjct: 110 HEDVKEGDSVTVVMNEHVDYN---GKQYPIASLPENLMSIIQAGGLVKAMRK 158
>gi|33860813|ref|NP_892374.1| 3-isopropylmalate dehydratase small subunit [Prochlorococcus
marinus subsp. pastoris str. CCMP1986]
gi|33633755|emb|CAE18714.1| 3-isopropylmalate dehydratase small subunit [Prochlorococcus
marinus subsp. pastoris str. CCMP1986]
Length = 206
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 63/112 (56%), Gaps = 6/112 (5%)
Query: 68 ATFHGLCY-VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENE 126
+ +G C +VGD+IDTD+IIPA +L + +++ LG T + + E
Sbjct: 13 SQINGKCISLVGDDIDTDRIIPARFLKCI-----DFDSLGKSVFDDDRKTLKGKHPFDLE 67
Query: 127 TKTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG 178
T I+I NFGCGSSREHAP AL G A++ ES+A IF+ N +A G
Sbjct: 68 TNKGASILIVNSNFGCGSSREHAPQALMRWGIKAIIGESFADIFYSNCIAIG 119
>gi|421078227|ref|ZP_15539186.1| 3-isopropylmalate dehydratase small subunit [Pelosinus fermentans
JBW45]
gi|392523812|gb|EIW46979.1| 3-isopropylmalate dehydratase small subunit [Pelosinus fermentans
JBW45]
Length = 164
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 65/108 (60%), Gaps = 3/108 (2%)
Query: 133 IIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEE 192
II+AG NFGCGSSRE AP L A S ++A+SYARIF+RN+ G + +SE C
Sbjct: 56 IIVAGKNFGCGSSREQAPEILAALKISCIIAKSYARIFYRNAFNNGLLLLENSELYDC-- 113
Query: 193 CSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLGPVIDAGGIFAYARK 240
CS GD V++ + S+++ E P DL +++AGG+ + RK
Sbjct: 114 CSEGDHVSVHLESSQVLLGEKSFEVASIPT-DLLQMVEAGGLVPFMRK 160
>gi|57234732|ref|YP_181193.1| 3-isopropylmalate dehydratase small subunit [Dehalococcoides
ethenogenes 195]
gi|57225180|gb|AAW40237.1| aconitase C-terminal domain protein [Dehalococcoides ethenogenes
195]
Length = 167
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 90/179 (50%), Gaps = 24/179 (13%)
Query: 69 TFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETK 128
G + GD+I TD I P + L + P+ L + L T+ R
Sbjct: 1 MLKGKAFKFGDSISTDHIAPGRLVHLRSNLPE----LAKHVLEDADPTFAQRV------- 49
Query: 129 TKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEAR 188
++AG NFG GSSREHAP+ + +G SAV+A+S ARIFFRN++ G P+
Sbjct: 50 KPGDFVVAGNNFGLGSSREHAPLIIKMSGVSAVLAKSVARIFFRNAINLG--LPV----L 103
Query: 189 LC--EECSTGDVVTIEIAESRLINHTTGKEY---KLKPIGDLGPVIDAGGIFAYARKTG 242
+C ++ + GD + +++ ++ + T G E K+ P + ++D GG+ Y +K G
Sbjct: 104 ICDTDKIAEGDELEVDLTGGKIYDRTNGAELTFGKIPPA--MLKILDEGGVMPYIKKYG 160
>gi|73748291|ref|YP_307530.1| 3-isopropylmalate dehydratase small subunit [Dehalococcoides sp.
CBDB1]
gi|73660007|emb|CAI82614.1| aconitase C-terminal domain protein [Dehalococcoides sp. CBDB1]
Length = 167
Score = 83.2 bits (204), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 90/179 (50%), Gaps = 24/179 (13%)
Query: 69 TFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETK 128
G + GD+I TD I P + L + P+ L + L T+ R
Sbjct: 1 MLKGKAFKFGDSISTDHIAPGRLVHLRSNLPE----LAKHVLEDADPTFAQRV------- 49
Query: 129 TKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEAR 188
++AG NFG GSSREHAP+ + AG +AV+A+S ARIFFRN++ G P+
Sbjct: 50 KPGDFVVAGNNFGLGSSREHAPLIIKMAGVNAVMAKSVARIFFRNAINLG--LPI----L 103
Query: 189 LC--EECSTGDVVTIEIAESRLINHTTGKEY---KLKPIGDLGPVIDAGGIFAYARKTG 242
+C ++ + GD + +++ ++ + T G E K+ P + ++D GG+ Y +K G
Sbjct: 104 ICDTDKIAEGDELEVDLDGGKIYDRTNGAELTFGKIPPA--MLKILDEGGVMPYIKKYG 160
>gi|434400826|ref|YP_007134830.1| homoaconitate hydratase family protein [Stanieria cyanosphaera PCC
7437]
gi|428271923|gb|AFZ37864.1| homoaconitate hydratase family protein [Stanieria cyanosphaera PCC
7437]
Length = 570
Score = 83.2 bits (204), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 53/109 (48%), Positives = 66/109 (60%), Gaps = 15/109 (13%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
F + Y+ GD+I+TD IIPA+ T N D E L YAL I EN+ K
Sbjct: 4 FENILYL-GDDINTDDIIPAKRGT----NGD-LEHLARYAL--------EYLIGENKLK- 48
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG 178
+Y II AG NFGCGSSRE+AP+A+ AAG V A S+A IF+RNS+ G
Sbjct: 49 EYNIIEAGDNFGCGSSREYAPLAIKAAGIKKVRARSFAEIFYRNSINIG 97
>gi|448423432|ref|ZP_21581974.1| 3-isopropylmalate dehydratase, small subunit [Halorubrum terrestre
JCM 10247]
gi|448449404|ref|ZP_21591733.1| 3-isopropylmalate dehydratase, small subunit [Halorubrum litoreum
JCM 13561]
gi|448507220|ref|ZP_21614860.1| 3-isopropylmalate dehydratase, small subunit [Halorubrum
distributum JCM 9100]
gi|448523860|ref|ZP_21619047.1| 3-isopropylmalate dehydratase, small subunit [Halorubrum
distributum JCM 10118]
gi|445683485|gb|ELZ35880.1| 3-isopropylmalate dehydratase, small subunit [Halorubrum terrestre
JCM 10247]
gi|445698942|gb|ELZ50978.1| 3-isopropylmalate dehydratase, small subunit [Halorubrum
distributum JCM 9100]
gi|445700933|gb|ELZ52924.1| 3-isopropylmalate dehydratase, small subunit [Halorubrum
distributum JCM 10118]
gi|445813495|gb|EMA63473.1| 3-isopropylmalate dehydratase, small subunit [Halorubrum litoreum
JCM 13561]
Length = 218
Score = 83.2 bits (204), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 48/112 (42%), Positives = 64/112 (57%), Gaps = 20/112 (17%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT------ 129
V G++IDTDQIIPA ++ +V ++ LG ++ + RF DE+ K
Sbjct: 26 VRGNDIDTDQIIPARFMKVVT-----FDGLGQFSF------FDQRFDDEDNEKDHPFNEE 74
Query: 130 KYK---IIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG 178
KYK +++ NFGCGSSREHAP AL G AVV ES+A IF N +A G
Sbjct: 75 KYKGANVLVVNANFGCGSSREHAPQALMRWGIDAVVGESFAEIFAGNCLALG 126
>gi|448480104|ref|ZP_21604498.1| 3-isopropylmalate dehydratase, small subunit [Halorubrum arcis JCM
13916]
gi|445822289|gb|EMA72059.1| 3-isopropylmalate dehydratase, small subunit [Halorubrum arcis JCM
13916]
Length = 218
Score = 83.2 bits (204), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 48/112 (42%), Positives = 64/112 (57%), Gaps = 20/112 (17%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT------ 129
V G++IDTDQIIPA ++ +V ++ LG ++ + RF DE+ K
Sbjct: 26 VRGNDIDTDQIIPARFMKVVT-----FDGLGQFSF------FDQRFDDEDNEKDHPFNEE 74
Query: 130 KYK---IIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG 178
KYK +++ NFGCGSSREHAP AL G AVV ES+A IF N +A G
Sbjct: 75 KYKGANVLVVNANFGCGSSREHAPQALMRWGIDAVVGESFAEIFAGNCLALG 126
>gi|289192143|ref|YP_003458084.1| 3-isopropylmalate dehydratase, small subunit [Methanocaldococcus
sp. FS406-22]
gi|288938593|gb|ADC69348.1| 3-isopropylmalate dehydratase, small subunit [Methanocaldococcus
sp. FS406-22]
Length = 164
Score = 83.2 bits (204), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 62/173 (35%), Positives = 91/173 (52%), Gaps = 21/173 (12%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
G + GD+IDTD IIP YL D YE L S+ + G IDEN K
Sbjct: 3 IKGRVHKFGDDIDTDAIIPGPYL----RTTDPYE-LASHCMAG---------IDENFPKK 48
Query: 130 --KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEA 187
+ +I+AG NFGCGSSRE A +A+ G AV+A+S+ARIF+RN++ G I + +
Sbjct: 49 VKEGDVIVAGENFGCGSSREQAVIAIKYCGIKAVIAKSFARIFYRNAINIGLIPIIANTD 108
Query: 188 RLCEECSTGDVVTIEI-AESRLINHTTGKEYKLKPIGDLGPVIDAGGIFAYAR 239
++ +E D+V I++ E I + P G +++AGG+ Y +
Sbjct: 109 KIEDE----DIVEIDLDKEEIKIINKDKIIKCKAPKGLEMEILNAGGLINYLK 157
>gi|254415157|ref|ZP_05028919.1| 3-isopropylmalate dehydratase, small subunit [Coleofasciculus
chthonoplastes PCC 7420]
gi|196177963|gb|EDX72965.1| 3-isopropylmalate dehydratase, small subunit [Coleofasciculus
chthonoplastes PCC 7420]
Length = 200
Score = 83.2 bits (204), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 46/103 (44%), Positives = 58/103 (56%), Gaps = 5/103 (4%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKIII 135
VVG++IDTD+IIPA YL V +E LG A A + + I++
Sbjct: 14 VVGNDIDTDRIIPARYLRCV-----TFEGLGDKAFADDRAQAKGQHPFDRPQYQGADILV 68
Query: 136 AGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG 178
GNFGCGSSREHAP AL G A++ ES+A IFF N +A G
Sbjct: 69 VNGNFGCGSSREHAPQALQKWGIQAILGESFAEIFFGNCLAMG 111
>gi|330835166|ref|YP_004409894.1| 3-isopropylmalate dehydratase small subunit [Metallosphaera cuprina
Ar-4]
gi|329567305|gb|AEB95410.1| 3-isopropylmalate dehydratase small subunit [Metallosphaera cuprina
Ar-4]
Length = 161
Score = 83.2 bits (204), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 86/165 (52%), Gaps = 17/165 (10%)
Query: 78 GDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKIIIAG 137
GD IDTD IIPA +L ++P L +A+ L + + +K I++AG
Sbjct: 11 GDKIDTDIIIPARHLKY--TDP---AYLAQHAMEPLDPEFYKK-------ASKGVIVVAG 58
Query: 138 GNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEECSTGD 197
FG GSSRE A +AL AAG AV+AES+ARIF+RN + G PL + +E + GD
Sbjct: 59 KVFGMGSSREQAAIALKAAGVKAVIAESFARIFYRNCINNG--LPLIVLPNVTKEINEGD 116
Query: 198 VVTIEIAESRLINHTTGKEYKLKPIGDLG-PVIDAGGIFAYARKT 241
V + + + G+ K K I + ++ +GGI Y +K
Sbjct: 117 FVKVNVETGEV--TVNGRTLKGKGITGMALEILKSGGIMDYLKKV 159
>gi|452856478|ref|YP_007498161.1| 3-isopropylmalate dehydratase (small subunit) [Bacillus
amyloliquefaciens subsp. plantarum UCMB5036]
gi|452080738|emb|CCP22503.1| 3-isopropylmalate dehydratase (small subunit) [Bacillus
amyloliquefaciens subsp. plantarum UCMB5036]
Length = 203
Score = 83.2 bits (204), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 82/170 (48%), Gaps = 25/170 (14%)
Query: 61 RATKEPTATFHGLCYVVGD-NIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTT 119
R EP T G V+ N+DTDQIIP ++L + E+ G G A +
Sbjct: 2 REKMEPLKTHTGKAAVLNRINVDTDQIIPKQFLKRI-------ERTG----YGRFAFFDW 50
Query: 120 RFIDENETKTKYK----------IIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARI 169
R+++ E +++ I+IAG NFGCGSSREHAP AL G ++A S+A I
Sbjct: 51 RYLENGEPDPEFELNRKVYEGASILIAGENFGCGSSREHAPWALDDYGFKIIIAPSFADI 110
Query: 170 FFRNSVATGEI---YPLDSEARLCEECSTGDVVTIEIAESRLINHTTGKE 216
F +N G + P D +L + + E++LI+ + GKE
Sbjct: 111 FHQNCFKNGMLPIRMPYDQWKKLAGQYENQSLNMTVDLENQLIHDSEGKE 160
>gi|392962045|ref|ZP_10327492.1| 3-isopropylmalate dehydratase small subunit [Pelosinus fermentans
DSM 17108]
gi|421056100|ref|ZP_15519027.1| 3-isopropylmalate dehydratase, small subunit [Pelosinus fermentans
B4]
gi|421065457|ref|ZP_15527207.1| 3-isopropylmalate dehydratase small subunit [Pelosinus fermentans
A12]
gi|421072922|ref|ZP_15534026.1| 3-isopropylmalate dehydratase small subunit [Pelosinus fermentans
A11]
gi|392438516|gb|EIW16339.1| 3-isopropylmalate dehydratase, small subunit [Pelosinus fermentans
B4]
gi|392445349|gb|EIW22681.1| 3-isopropylmalate dehydratase small subunit [Pelosinus fermentans
A11]
gi|392452803|gb|EIW29708.1| 3-isopropylmalate dehydratase small subunit [Pelosinus fermentans
DSM 17108]
gi|392458872|gb|EIW35349.1| 3-isopropylmalate dehydratase small subunit [Pelosinus fermentans
A12]
Length = 164
Score = 83.2 bits (204), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 66/108 (61%), Gaps = 3/108 (2%)
Query: 133 IIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEE 192
II+AG NFGCGSSRE AP L A S ++A+SYARIF+RN+ G + +SE L +
Sbjct: 56 IIVAGKNFGCGSSREQAPEILAALKISCIIAKSYARIFYRNAFNNGLLLLENSE--LYDY 113
Query: 193 CSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLGPVIDAGGIFAYARK 240
CS GD V++ + S+++ E P DL +++AGG+ + RK
Sbjct: 114 CSEGDHVSVHLESSQVLLGEKSFEVASIPT-DLLQMVEAGGLVPFMRK 160
>gi|297616700|ref|YP_003701859.1| 3-isopropylmalate dehydratase, small subunit [Syntrophothermus
lipocalidus DSM 12680]
gi|297144537|gb|ADI01294.1| 3-isopropylmalate dehydratase, small subunit [Syntrophothermus
lipocalidus DSM 12680]
Length = 166
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 92/181 (50%), Gaps = 30/181 (16%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYL--TLVPSNPDEYEKLGSYALIGLPATYTTRFIDENET 127
G + GD+++TD II Y TL + +L + + L + ++
Sbjct: 3 LRGKAHKFGDDVNTDYIISGRYKFKTL------DMTELAKHVMEDLDPDFYSKV------ 50
Query: 128 KTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEA 187
K +I+AG NFGCGSSRE AP A+ AG SAV+A+S+ARIF+RN + TG PL
Sbjct: 51 -QKGDMIVAGKNFGCGSSREQAPWAIIHAGISAVLAKSFARIFYRNCINTG--LPL---- 103
Query: 188 RLCEECST-----GDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARKT 241
EC T GD + +++ + N T G E +KP+ + ++ GG+ + +K
Sbjct: 104 ---IECDTDRIEPGDELEVDLERGVISNLTQGTEIPIKPLPKVMIKILSDGGLVEHFKKY 160
Query: 242 G 242
G
Sbjct: 161 G 161
>gi|291545691|emb|CBL18799.1| 3-isopropylmalate dehydratase, small subunit [Ruminococcus sp.
SR1/5]
Length = 163
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/172 (38%), Positives = 90/172 (52%), Gaps = 18/172 (10%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
F G +V+GD+IDTD IIP EYL L + + Y L +
Sbjct: 4 FTGKVWVLGDDIDTDIIIPTEYLAL-----KTIDDMKQYGFSPLRPELAGQI-------Q 51
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
K II+AG NFGCGSSRE AP + A G V+A+S+ARIFFRNS+ G + L + L
Sbjct: 52 KGDIIVAGKNFGCGSSREQAPEIIKALGVQCVIAKSFARIFFRNSINNGLL--LIEQPDL 109
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPI-GDLGPVIDAGGIFAYARK 240
+ GD VT+ + E + H GK+Y + + +L +I AGG+ RK
Sbjct: 110 HDNVKEGDQVTVVMNEH--VEH-NGKQYPIASLPENLMDIIQAGGLVKAMRK 158
>gi|222479302|ref|YP_002565539.1| 3-isopropylmalate dehydratase, small subunit [Halorubrum
lacusprofundi ATCC 49239]
gi|222452204|gb|ACM56469.1| 3-isopropylmalate dehydratase, small subunit [Halorubrum
lacusprofundi ATCC 49239]
Length = 217
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 65/111 (58%), Gaps = 19/111 (17%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENE-----TKTK 130
V G++IDTDQIIPA ++ +V ++ LG ++ + RF D+NE + +
Sbjct: 26 VRGNDIDTDQIIPARFMKVVT-----FDGLGQFSF------FDQRFDDDNEKDHPFNEEQ 74
Query: 131 YK---IIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG 178
Y+ +++ NFGCGSSREHAP AL G AVV ES+A IF N +A G
Sbjct: 75 YQGANVLVVNANFGCGSSREHAPQALMRWGIDAVVGESFAEIFAGNCLALG 125
>gi|421062751|ref|ZP_15524831.1| 3-isopropylmalate dehydratase, small subunit, partial [Pelosinus
fermentans B3]
gi|392439126|gb|EIW16861.1| 3-isopropylmalate dehydratase, small subunit, partial [Pelosinus
fermentans B3]
Length = 136
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 66/108 (61%), Gaps = 3/108 (2%)
Query: 133 IIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEE 192
II+AG NFGCGSSRE AP L A S ++A+SYARIF+RN+ G + +SE L +
Sbjct: 28 IIVAGKNFGCGSSREQAPEILAALKISCIIAKSYARIFYRNAFNNGLLLLENSE--LYDY 85
Query: 193 CSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLGPVIDAGGIFAYARK 240
CS GD V++ + S+++ E P DL +++AGG+ + RK
Sbjct: 86 CSEGDHVSVHLESSQVLLGEKSFEVASIPT-DLLQMVEAGGLVPFMRK 132
>gi|226322409|ref|ZP_03797927.1| hypothetical protein COPCOM_00177 [Coprococcus comes ATCC 27758]
gi|225209209|gb|EEG91563.1| 3-isopropylmalate dehydratase, small subunit [Coprococcus comes
ATCC 27758]
Length = 163
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/172 (38%), Positives = 90/172 (52%), Gaps = 18/172 (10%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
F G +V+GD+IDTD IIP EYL L + + Y L +
Sbjct: 4 FTGRVWVLGDDIDTDIIIPTEYLAL-----KTIDDMKQYGFSPLRPELAGQI-------Q 51
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
K II+AG NFGCGSSRE AP + A G V+A+S+ARIFFRNS+ G + L + L
Sbjct: 52 KGDIIVAGKNFGCGSSREQAPEIIKAMGVQCVIAKSFARIFFRNSINNGLL--LIEQPDL 109
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPI-GDLGPVIDAGGIFAYARK 240
++ GD +T+ + E N GKEY + + +L +I AGG+ RK
Sbjct: 110 YDDMKEGDEITVVMNEHVDYN---GKEYPIASLPENLMSIIQAGGLVKAMRK 158
>gi|291562926|emb|CBL41742.1| 3-isopropylmalate dehydratase, small subunit [butyrate-producing
bacterium SS3/4]
Length = 160
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 88/167 (52%), Gaps = 17/167 (10%)
Query: 71 HGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTK 130
G + +++DTDQII ++YL L+P+ E++ + L + +
Sbjct: 3 EGTIFKFHNDLDTDQIIASQYL-LLPN----LEEMKEHTFESLDPDFPKKV-------KP 50
Query: 131 YKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLC 190
++ G NFGCGSSRE AP L A G AVVA+S+ARIF+RN++ G P+ L
Sbjct: 51 GDFVVGGENFGCGSSREQAPGVLKALGVQAVVAKSFARIFYRNAINIG--LPVIVCKDLP 108
Query: 191 EECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFA 236
++ TGD T+E++ S H GK Y + + + +++ GG+ A
Sbjct: 109 DDVKTGD--TMELSMSDGTAHANGKTYSCTKLPEYMQNILNQGGLIA 153
>gi|147678853|ref|YP_001213068.1| 3-isopropylmalate dehydratase small subunit [Pelotomaculum
thermopropionicum SI]
gi|146274950|dbj|BAF60699.1| 3-isopropylmalate dehydratase small subunit [Pelotomaculum
thermopropionicum SI]
Length = 166
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 91/180 (50%), Gaps = 28/180 (15%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
F G + G++++TD II G Y L R + E+
Sbjct: 3 FEGRAHKFGNDVNTDYIIS-----------------GKYKFKTLDMKELARHVMEDLDPD 45
Query: 130 KYK------IIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPL 183
Y+ I+AG NFGCGSSRE AP+A+ AG SAV+A+S+ARIF+RN++ TG L
Sbjct: 46 FYRKVSPGDFIVAGTNFGCGSSREQAPLAIKYAGVSAVLAKSFARIFYRNAINTG----L 101
Query: 184 DSEARLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPI-GDLGPVIDAGGIFAYARKTG 242
+ ++ GD +++++A + N T +KP+ + +++ GG+ A+ +K G
Sbjct: 102 PAVECDTDQIDPGDELSVDLAAGVITNRTKNAVIPVKPLPAVMIRILNDGGLAAHFKKHG 161
>gi|167765905|ref|ZP_02437958.1| hypothetical protein CLOSS21_00396 [Clostridium sp. SS2/1]
gi|167712403|gb|EDS22982.1| isopropylmalate/citramalate isomerase small subunit [Clostridium
sp. SS2/1]
Length = 188
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 90/169 (53%), Gaps = 21/169 (12%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT-- 129
G + +++DTDQII ++YL L+P N +E + YT ID++ K
Sbjct: 32 GRVFKFHNDVDTDQIIASQYL-LLP-NIEEMK------------VYTFESIDKDFAKKVK 77
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
+ I++AG NFGCGSSRE AP L A G AVVA+S+ARIF+RNS+ G P+ L
Sbjct: 78 EGDIVVAGENFGCGSSREQAPSVLKALGVKAVVAKSFARIFYRNSINIG--LPVIISKDL 135
Query: 190 CEECSTGDVVTIEIAESRL-INHTTGKEYKLKPIGDLGPVIDAGGIFAY 237
++ G + I ++E + T KL P + ++D GG+ +
Sbjct: 136 YDKVEDGADIDINLSEGWIKTEDETLPCTKLPPY--MQNILDHGGLINF 182
>gi|289522540|ref|ZP_06439394.1| 3-isopropylmalate dehydratase, small subunit [Anaerobaculum
hydrogeniformans ATCC BAA-1850]
gi|289504376|gb|EFD25540.1| 3-isopropylmalate dehydratase, small subunit [Anaerobaculum
hydrogeniformans ATCC BAA-1850]
Length = 168
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 94/182 (51%), Gaps = 25/182 (13%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
G + GD+I+TD II +Y + N L ++ + ++ +
Sbjct: 6 LKGKAHKFGDDINTDYIIAGKYTKTLNLND-----LAAHLFEDIDPEFSKKL-------K 53
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
+ +++AG NFGCGSSRE AP+A+ +G SAV+A+S+ARIFFRN++ G P A +
Sbjct: 54 RGDMVVAGKNFGCGSSREQAPIAIKESGVSAVLAKSFARIFFRNAINIG--LP----ALV 107
Query: 190 C--EECSTGDVVTIEIAESRLINHTTGKEYKL---KPIGDLGPVIDAGGIFAYARKTGMI 244
C +E GD + +++ ++N KE K+ K + ++ GG+ Y +K G
Sbjct: 108 CDTDEIDDGDELEVDLESGFVLN--ISKEIKIPTEKMPDIMKAILKEGGLVPYLKKYGDF 165
Query: 245 AS 246
A+
Sbjct: 166 AA 167
>gi|153810126|ref|ZP_01962794.1| hypothetical protein RUMOBE_00507 [Ruminococcus obeum ATCC 29174]
gi|149833305|gb|EDM88386.1| 3-isopropylmalate dehydratase, small subunit [Ruminococcus obeum
ATCC 29174]
Length = 163
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/172 (38%), Positives = 90/172 (52%), Gaps = 18/172 (10%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
F G +V+GD+IDTD IIP EYL L + + Y L +
Sbjct: 4 FTGKVWVLGDDIDTDIIIPTEYLAL-----KTIDDMKQYGFSPLRPELAGQI-------Q 51
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
K II+AG NFGCGSSRE AP + A G V+A+S+ARIFFRNS+ G + L + L
Sbjct: 52 KGDIIVAGKNFGCGSSREQAPEIIKALGIQCVIAKSFARIFFRNSINNGLL--LIEQPDL 109
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPI-GDLGPVIDAGGIFAYARK 240
++ GD VT+ + E N GK+Y + + +L +I AGG+ RK
Sbjct: 110 HDDIKEGDTVTVVMNEHVDYN---GKQYPIASLPENLMSIIQAGGLVKAMRK 158
>gi|219850442|ref|YP_002464875.1| 3-isopropylmalate dehydratase small subunit [Chloroflexus aggregans
DSM 9485]
gi|219544701|gb|ACL26439.1| 3-isopropylmalate dehydratase, small subunit [Chloroflexus
aggregans DSM 9485]
Length = 166
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 84/170 (49%), Gaps = 15/170 (8%)
Query: 74 CYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKI 133
++ G +I+TDQI+P Y + + E + + D I
Sbjct: 4 VWLFGPDINTDQIVPGRYAPYMLKDESELRRY----------PFVEHRPDFAPNVRPGDI 53
Query: 134 IIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEEC 193
I+AG NFGCGSSRE+AP+AL G A++A +ARIFFRN++ G P + A L E
Sbjct: 54 IVAGKNFGCGSSREYAPLALRMVGIGAIIAPLFARIFFRNALNLG--IPCFT-ADLTSEL 110
Query: 194 STGDVVTIEIAESRLINHTTGKEYKLKPIG-DLGPVIDAGGIFAYARKTG 242
+ GD V +++ + R I G+ L P L V AGGI + R+ G
Sbjct: 111 ADGDEVELDLEQGR-ITTADGRVINLPPPPLFLREVWAAGGIVPFYRQYG 159
>gi|410455610|ref|ZP_11309487.1| 3-isopropylmalate dehydratase, small subunit [Bacillus bataviensis
LMG 21833]
gi|409929091|gb|EKN66181.1| 3-isopropylmalate dehydratase, small subunit [Bacillus bataviensis
LMG 21833]
Length = 194
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/138 (39%), Positives = 69/138 (50%), Gaps = 22/138 (15%)
Query: 65 EPTATFHGLCYVVGD-NIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFID 123
EP T GL Y + N+DTDQIIP ++L + E G + Y RF D
Sbjct: 2 EPLRTHQGLVYPLNRANVDTDQIIPKQFLKRI-----ERSGFGQFLF------YNWRFDD 50
Query: 124 ENETKT-------KYK---IIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRN 173
E + KYK II+AG NFGCGSSREHAP A+ G V+A S+A IF N
Sbjct: 51 EGNLREDFSLNDPKYKDASIIVAGENFGCGSSREHAPWAIQDFGFKVVIAPSFADIFKNN 110
Query: 174 SVATGEIYPLDSEARLCE 191
TG + SE ++ E
Sbjct: 111 CAKTGILTVQASEEQVQE 128
>gi|284173139|ref|ZP_06387108.1| 3-isopropylmalate dehydratase small subunit [Sulfolobus
solfataricus 98/2]
gi|384432813|ref|YP_005642171.1| 3-isopropylmalate dehydratase small subunit [Sulfolobus
solfataricus 98/2]
gi|261600967|gb|ACX90570.1| 3-isopropylmalate dehydratase, small subunit [Sulfolobus
solfataricus 98/2]
Length = 165
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/172 (35%), Positives = 90/172 (52%), Gaps = 18/172 (10%)
Query: 78 GDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKIIIAG 137
GD IDTD IIPA YL ++P + L +A+ L + + +K +I+AG
Sbjct: 11 GDKIDTDIIIPARYLKY--TDP---QYLAQHAMEPLDPEFYKK-------ASKGVVIVAG 58
Query: 138 GNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEECSTGD 197
FG GSSRE A +AL AAG AV+AES+ARIF+RN++ G P+ + E + +
Sbjct: 59 KVFGMGSSREQAAIALKAAGVKAVIAESFARIFYRNAINNG--LPVITLPNSTREINENE 116
Query: 198 VVTIEIAESRLINHTTGKEYKLKPIGDLG-PVIDAGGIFAYARKTGMIASRN 248
V I + ++ K K K I + ++ AGGI Y +K + +RN
Sbjct: 117 YVRINVETGEIL--VGNKVLKGKGITGMALEILQAGGIMEYLKKIQTV-NRN 165
>gi|225570211|ref|ZP_03779236.1| hypothetical protein CLOHYLEM_06307 [Clostridium hylemonae DSM
15053]
gi|225161006|gb|EEG73625.1| hypothetical protein CLOHYLEM_06307 [Clostridium hylemonae DSM
15053]
Length = 158
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 86/165 (52%), Gaps = 17/165 (10%)
Query: 78 GDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKIIIAG 137
G+NI+TD I P +Y+ L E+ YA+ + + + K I +AG
Sbjct: 10 GNNINTDIISPPQYMEL------PVEEAARYAMSAVDPDFYRKV-------RKGDIFVAG 56
Query: 138 GNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEECSTGD 197
N G GSSRE +P+ L G S V A+S+ARIF+RN + G P E R ++ GD
Sbjct: 57 SNLGSGSSRETSPLTLKYLGVSVVAAKSFARIFYRNLINVG--IPA-IECRDTDKIREGD 113
Query: 198 VVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARKT 241
+ +++ E + N T + YK + + + L +I+AGG+F Y ++
Sbjct: 114 RLRVDVKEGYIYNLTRSERYKCQKLPEHLMKIIEAGGLFQYLKEV 158
>gi|15899212|ref|NP_343817.1| 3-isopropylmalate dehydratase small subunit [Sulfolobus
solfataricus P2]
gi|227829307|ref|YP_002831086.1| 3-isopropylmalate dehydratase small subunit [Sulfolobus islandicus
L.S.2.15]
gi|229578078|ref|YP_002836476.1| 3-isopropylmalate dehydratase small subunit [Sulfolobus islandicus
Y.G.57.14]
gi|284996665|ref|YP_003418432.1| 3-isopropylmalate dehydratase small subunit [Sulfolobus islandicus
L.D.8.5]
gi|23396670|sp|Q97VY3.1|LEUD_SULSO RecName: Full=3-isopropylmalate dehydratase small subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|259494461|sp|C3MKR6.1|LEUD_SULIL RecName: Full=3-isopropylmalate dehydratase small subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|259494464|sp|C3N992.1|LEUD_SULIY RecName: Full=3-isopropylmalate dehydratase small subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|13815771|gb|AAK42607.1| 3-isopropylmalate dehydratase, small subunit (isopropylmalate
isomerase) (alpha IPM isomerase) (IPMI) (leuD)
[Sulfolobus solfataricus P2]
gi|227455754|gb|ACP34441.1| 3-isopropylmalate dehydratase, small subunit [Sulfolobus islandicus
L.S.2.15]
gi|228008792|gb|ACP44554.1| 3-isopropylmalate dehydratase, small subunit [Sulfolobus islandicus
Y.G.57.14]
gi|284444560|gb|ADB86062.1| 3-isopropylmalate dehydratase, small subunit [Sulfolobus islandicus
L.D.8.5]
Length = 165
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/172 (36%), Positives = 89/172 (51%), Gaps = 18/172 (10%)
Query: 78 GDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKIIIAG 137
GD IDTD IIPA YL ++P + L + + L + + +K II+AG
Sbjct: 11 GDKIDTDIIIPARYLKY--TDP---QYLAQHVMEPLDPEFYKK-------ASKGVIIVAG 58
Query: 138 GNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEECSTGD 197
FG GSSRE A +AL AAG AVVAES+ARIF+RN++ G P+ + +E
Sbjct: 59 KVFGMGSSREQAAIALKAAGVKAVVAESFARIFYRNAINNG--LPVITLPNSTKEIDENS 116
Query: 198 VVTIEIAESRLINHTTGKEYKLKPIGDLG-PVIDAGGIFAYARKTGMIASRN 248
V I++ ++ K K K I + ++ AGGI Y +K + +RN
Sbjct: 117 YVKIDVETGEIL--VGNKVLKGKGITGMALEILQAGGIMEYLKKMQTV-NRN 165
>gi|297620194|ref|YP_003708299.1| 3-isopropylmalate dehydratase, small subunit [Methanococcus voltae
A3]
gi|297379171|gb|ADI37326.1| 3-isopropylmalate dehydratase, small subunit [Methanococcus voltae
A3]
Length = 238
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 73/131 (55%), Gaps = 13/131 (9%)
Query: 54 KATSADSRATKEPTATFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGL 113
K+ + +K + G ++ GD++DTD IIP YL D YE L + + G+
Sbjct: 11 KSQKIEELYSKGLPSKITGKAHIFGDDVDTDAIIPGPYL----RTTDLYE-LALHCMAGI 65
Query: 114 PATYTTRFIDENETKTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRN 173
+ + + + +I+AG NFGCGSSRE APVA+ G A++AES+ARIF+RN
Sbjct: 66 DEDFPNKTANGD-------VILAGENFGCGSSREQAPVAIKYCGIQAIIAESFARIFYRN 118
Query: 174 SVATGEIYPLD 184
+ G I P++
Sbjct: 119 CINLG-IIPIE 128
>gi|254167699|ref|ZP_04874549.1| 3-isopropylmalate dehydratase, small subunit subfamily
[Aciduliprofundum boonei T469]
gi|289597137|ref|YP_003483833.1| 3-isopropylmalate dehydratase, small subunit [Aciduliprofundum
boonei T469]
gi|197623227|gb|EDY35792.1| 3-isopropylmalate dehydratase, small subunit subfamily
[Aciduliprofundum boonei T469]
gi|289534924|gb|ADD09271.1| 3-isopropylmalate dehydratase, small subunit [Aciduliprofundum
boonei T469]
Length = 168
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 86/172 (50%), Gaps = 16/172 (9%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + GDNI TD I P Y L + P+ L + L + +
Sbjct: 7 GKVWKFGDNISTDHIAPGRYFHLRTNLPE----LAKHVLEDADPEFPKKV-------KPG 55
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
II+AG NFG GSSREHAP + AG S V+A+S+ARIF+RN+ G PL + +
Sbjct: 56 DIIVAGNNFGLGSSREHAPRIIKIAGVSCVIAKSFARIFYRNAFNIG--LPLLTAD--TD 111
Query: 192 ECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARKTG 242
+ GD + I++ + + + T G E + PI + +++ GGI + +K G
Sbjct: 112 KIDEGDELEIDLEKGIIKDLTKGIELQSTPIPPFMMRLLEDGGIVEHIKKHG 163
>gi|270307817|ref|YP_003329875.1| aconitase/homoaconitase C-terminal domain-containing protein,
3-isopropylmalate dehydratase small subunit
[Dehalococcoides sp. VS]
gi|270153709|gb|ACZ61547.1| aconitase/homoaconitase C-terminal domain protein,
3-isopropylmalate dehydratase small subunit
[Dehalococcoides sp. VS]
Length = 167
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 90/179 (50%), Gaps = 24/179 (13%)
Query: 69 TFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETK 128
G + GD+I TD I P + L + P+ L + L T+ +
Sbjct: 1 MLKGKVFKFGDSISTDHIAPGRLVHLRSNLPE----LAKHVLEDADPTFAQKV------- 49
Query: 129 TKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEAR 188
++AG NFG GSSREHAP+ + +G SAV+A+S ARIFFRN++ G P+
Sbjct: 50 KPGDFVVAGNNFGLGSSREHAPLIIKMSGVSAVLAKSVARIFFRNAINLG--LPV----L 103
Query: 189 LC--EECSTGDVVTIEIAESRLINHTTGKEY---KLKPIGDLGPVIDAGGIFAYARKTG 242
+C ++ + GD + +++ ++ + T G E K+ P + ++D GG+ Y +K G
Sbjct: 104 ICDTDKIAEGDELEVDLKGGKIYDRTNGAELTFGKIPPA--MLKILDEGGVMPYIKKYG 160
>gi|28804801|dbj|BAC57935.1| 3-isopropylmalate dehydratase small subunit [Selenomonas
ruminantium]
Length = 119
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 65/111 (58%), Gaps = 3/111 (2%)
Query: 133 IIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEE 192
I++ G NFGCGSSREHAPVA+ A+G V+A S+ARIF+RN + G PL E+
Sbjct: 11 IMVGGRNFGCGSSREHAPVAIKASGIPVVIAASFARIFYRNGINIG--LPLLEIGDDVEK 68
Query: 193 CSTGDVVTIEIAESRLINHTTGKEYKLKPI-GDLGPVIDAGGIFAYARKTG 242
D + +++ + N TTG + P+ G + + +AGG+ Y ++ G
Sbjct: 69 IHADDKLQVDVTTGEIKNLTTGDVFHAHPLPGFVQEIAEAGGLIEYIKRKG 119
>gi|291550797|emb|CBL27059.1| 3-isopropylmalate dehydratase, small subunit [Ruminococcus torques
L2-14]
Length = 164
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/172 (37%), Positives = 93/172 (54%), Gaps = 18/172 (10%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
F G +V+GD+IDTD IIP EYL L + + Y L +
Sbjct: 4 FTGKVWVLGDDIDTDIIIPTEYLAL-----KTIDDMKQYGFSPLRPELAGQI-------Q 51
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
K II+AG NFGCGSSRE AP + A G V+A+S+ARIFFRNS+ G + L + L
Sbjct: 52 KGDIIVAGKNFGCGSSREQAPEIIKALGIQCVIAKSFARIFFRNSINNGLL--LIEQPDL 109
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPI-GDLGPVIDAGGIFAYARK 240
++ GD TI++ ++ +++ GKEY + + +L +I AGG+ RK
Sbjct: 110 YDDMKEGD--TIDVVMNQHVDY-NGKEYPIASLPENLMSIIQAGGLVKAMRK 158
>gi|312865144|ref|ZP_07725372.1| 3-isopropylmalate dehydratase, small subunit [Streptococcus downei
F0415]
gi|311099255|gb|EFQ57471.1| 3-isopropylmalate dehydratase, small subunit [Streptococcus downei
F0415]
Length = 197
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 83/170 (48%), Gaps = 36/170 (21%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT------ 129
++ DNIDTDQI+P ++L L+ + + G Y + Y R++D+N T+
Sbjct: 14 LMNDNIDTDQILPKQFLKLI-----DKKGFGKYLM------YEWRYLDDNYTENPDFIFN 62
Query: 130 -----KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG---EIY 181
K I+I G NFG GSSREHA AL G ++A S+ I + N + G +
Sbjct: 63 TAPYRKATILITGDNFGAGSSREHAAWALADYGFKVIIAGSFGDIHYNNDLNNGILPIVQ 122
Query: 182 PLDSEARLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLGPVIDA 231
PL+ +L T D +T+++ + ++I+ P+GD ID
Sbjct: 123 PLEVRQKLARLAPT-DQITVDLLQQKIIS----------PVGDFDFEIDG 161
>gi|407464310|ref|YP_006775192.1| 3-isopropylmalate dehydratase small subunit [Candidatus
Nitrosopumilus sp. AR2]
gi|407047498|gb|AFS82250.1| 3-isopropylmalate dehydratase small subunit [Candidatus
Nitrosopumilus sp. AR2]
Length = 194
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/179 (35%), Positives = 91/179 (50%), Gaps = 34/179 (18%)
Query: 80 NIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT--------KY 131
N+DTDQI+P ++L LV +K G G + R+ DENE K KY
Sbjct: 18 NVDTDQIVPKQFLKLV-------QKSG----FGKFLFFNWRY-DENENKKSDFILNDPKY 65
Query: 132 ---KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEAR 188
KI++ G NFGCGSSREHA AL G S ++A S+A IF N G I P+ + +
Sbjct: 66 ENSKILVTGDNFGCGSSREHAVWALLDYGFSVIIAPSFADIFLSNCFKNG-ILPISLDQK 124
Query: 189 LCEE-CSTGDVVTIEIAESRLINHTTGK------EYKLKPIGDLGPVIDAGGIFAYARK 240
+ E+ +VVT+++ E++LI ++ + YK K + L + D F Y K
Sbjct: 125 IVEKLLRENEVVTVDL-ENQLIKTSSDEISFDIDSYKKKIL--LEGLDDIAQTFQYEDK 180
>gi|401683680|ref|ZP_10815566.1| 3-isopropylmalate dehydratase, small subunit [Streptococcus sp.
BS35b]
gi|400187758|gb|EJO21952.1| 3-isopropylmalate dehydratase, small subunit [Streptococcus sp.
BS35b]
Length = 197
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 84/170 (49%), Gaps = 36/170 (21%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT------ 129
++ DNIDTDQI+P ++L L+ + G Y + Y R++D+N T+
Sbjct: 14 LMNDNIDTDQILPKQFLKLIDK-----KGFGKYLM------YAWRYLDDNYTEDPDFVFN 62
Query: 130 -----KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGE---IY 181
K I+I+G NFG GSSREHA AL G V+A S+ I + N + G +
Sbjct: 63 RPEYRKASILISGDNFGAGSSREHAAWALADYGFKVVIAGSFGDIHYNNELNNGMLPIVQ 122
Query: 182 PLDSEARLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLGPVIDA 231
P D +L + T D VT+++ + ++I+ P+G+ ID+
Sbjct: 123 PRDVREKLAQLKPT-DQVTVDLEQQKIIS----------PVGEFSFEIDS 161
>gi|291288704|ref|YP_003505520.1| 3-isopropylmalate dehydratase small subunit [Denitrovibrio
acetiphilus DSM 12809]
gi|290885864|gb|ADD69564.1| 3-isopropylmalate dehydratase, small subunit [Denitrovibrio
acetiphilus DSM 12809]
Length = 201
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/158 (35%), Positives = 83/158 (52%), Gaps = 27/158 (17%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENE------TKT 129
V GD+IDTD+IIPA +L V ++ +G Y RF ++ + +
Sbjct: 16 VPGDDIDTDRIIPARFLKCV-----------TFDALGEQLFYDVRFDEDGKPLNFPIDRP 64
Query: 130 KYK---IIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSE 186
+YK II++G NFGCGSSREHAP ++ AG A++A SYA IFF N G + S+
Sbjct: 65 QYKGANIIVSGNNFGCGSSREHAPQSIKKAGFDAIIAGSYAEIFFGNCTTLGIVCAEASD 124
Query: 187 ARLCE-----ECSTGDVVTIEIAESRLINHTTGKEYKL 219
E E + + + +++AES + GK YK+
Sbjct: 125 DIRGELMREIEANPSEKMELDVAESSV--SFNGKSYKV 160
>gi|317498855|ref|ZP_07957140.1| 3-isopropylmalate dehydratase [Lachnospiraceae bacterium 5_1_63FAA]
gi|429763179|ref|ZP_19295535.1| isopropylmalate/citramalate isomerase small subunit [Anaerostipes
hadrus DSM 3319]
gi|291559803|emb|CBL38603.1| 3-isopropylmalate dehydratase, small subunit [butyrate-producing
bacterium SSC/2]
gi|316893851|gb|EFV16048.1| 3-isopropylmalate dehydratase [Lachnospiraceae bacterium 5_1_63FAA]
gi|429179354|gb|EKY20608.1| isopropylmalate/citramalate isomerase small subunit [Anaerostipes
hadrus DSM 3319]
Length = 158
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 88/169 (52%), Gaps = 21/169 (12%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT-- 129
G + +++DTDQII ++YL L N +E + YT ID++ K
Sbjct: 2 GRVFKFHNDVDTDQIIASQYLLL--PNIEEMK------------VYTFESIDKDFAKKVK 47
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
+ I++AG NFGCGSSRE AP L A G AVVA+S+ARIF+RNS+ G P+ L
Sbjct: 48 EGDIVVAGENFGCGSSREQAPSVLKALGVKAVVAKSFARIFYRNSINIG--LPVIISKDL 105
Query: 190 CEECSTGDVVTIEIAESRL-INHTTGKEYKLKPIGDLGPVIDAGGIFAY 237
++ G + I ++E + T KL P + ++D GG+ +
Sbjct: 106 YDKVEDGADIDINLSEGWIKTEDETLPCTKLPPY--MQNILDHGGLINF 152
>gi|354567951|ref|ZP_08987118.1| 3-isopropylmalate dehydratase, small subunit [Fischerella sp.
JSC-11]
gi|353541625|gb|EHC11092.1| 3-isopropylmalate dehydratase, small subunit [Fischerella sp.
JSC-11]
Length = 202
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 57/103 (55%), Gaps = 5/103 (4%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKIII 135
+VGD+IDTD+IIPA +L V ++ LG + A + KI++
Sbjct: 15 LVGDDIDTDRIIPARFLRCVT-----FDGLGEHVFADDRAALKGEHAFDQVQYQGAKILV 69
Query: 136 AGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG 178
NFGCGSSREHAP A+ G A+V ES+A IFF N VA G
Sbjct: 70 VNRNFGCGSSREHAPQAIAKWGIQALVGESFAEIFFGNCVAMG 112
>gi|152990475|ref|YP_001356197.1| 3-isopropylmalate dehydratase, small subunit [Nitratiruptor sp.
SB155-2]
gi|151422336|dbj|BAF69840.1| 3-isopropylmalate dehydratase, small subunit [Nitratiruptor sp.
SB155-2]
Length = 153
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/149 (40%), Positives = 84/149 (56%), Gaps = 17/149 (11%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + GDNIDTD II A YL S+P E L + + + +
Sbjct: 6 GKVWKFGDNIDTDLIIAARYLN--TSDPHE---LAKHVMEDADPDFVKKL-------QPG 53
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG-EIYPLDSEARLC 190
II+AG NFGCGSSREHAP+AL AAG +AVVA+S+ARIF+RN+ G I+ L ++
Sbjct: 54 DIIVAGENFGCGSSREHAPIALKAAGVAAVVAKSFARIFYRNAFNMGLPIFELSETDKIN 113
Query: 191 EECSTGDVVTIEIAESRLINHTTGKEYKL 219
E GD+++I++ + + + EYKL
Sbjct: 114 E----GDLISIDMEKGVVKDLNKHIEYKL 138
>gi|206901380|ref|YP_002251338.1| 3-isopropylmalate dehydratase small subunit 2 [Dictyoglomus
thermophilum H-6-12]
gi|206740483|gb|ACI19541.1| 3-isopropylmalate dehydratase small subunit 2 [Dictyoglomus
thermophilum H-6-12]
Length = 166
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 87/173 (50%), Gaps = 17/173 (9%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + GD+I+TD II +Y ++ ++ + L + + T
Sbjct: 5 GRAHKFGDDINTDYIISGKY----KFKSLDFNEMSKHLFEDLDPEFYKKI-------TPG 53
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
II+AG NFGCGSSRE AP+ + AG S V+A+S+ARIF+RNS+ G PL EA +
Sbjct: 54 DIIVAGKNFGCGSSREQAPLVIKHAGISLVIAKSFARIFYRNSINVG--LPL-LEAD-TD 109
Query: 192 ECSTGDVVTIEIAESRLINHTTGKEYKLKPI--GDLGPVIDAGGIFAYARKTG 242
+ GD + +++ ++ N T K + ++ AGG+ Y +K G
Sbjct: 110 QIDQGDELEVDLFNGKIFNKTKNIVINSKSTFPDIMVKILQAGGLVEYLKKEG 162
>gi|291550795|emb|CBL27057.1| 3-isopropylmalate dehydratase, small subunit [Ruminococcus torques
L2-14]
Length = 159
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/173 (35%), Positives = 92/173 (53%), Gaps = 23/173 (13%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + +++DTDQII ++YL L+P N DE + ++T +D + K K
Sbjct: 4 GTIFKFHNDLDTDQIIASQYL-LLP-NLDEMK------------SHTFESLDPDFAK-KV 48
Query: 132 K---IIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEAR 188
K ++ G NFGCGSSRE AP L A G AV+A+S+ARIF+RN++ G P+
Sbjct: 49 KPGDFVVGGENFGCGSSREQAPGVLKALGVQAVIAKSFARIFYRNAINIG--LPVIVCKE 106
Query: 189 LCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
L +E TGD T+E+ S GK Y + + + +++ GG+ A K
Sbjct: 107 LPDEVKTGD--TMELRMSDGTAEANGKTYSCTKLPEYMQNILNQGGLIASLNK 157
>gi|429190123|ref|YP_007175801.1| 3-isopropylmalate dehydratase small subunit [Natronobacterium
gregoryi SP2]
gi|448326032|ref|ZP_21515403.1| 3-isopropylmalate dehydratase small subunit [Natronobacterium
gregoryi SP2]
gi|429134341|gb|AFZ71352.1| 3-isopropylmalate dehydratase, small subunit [Natronobacterium
gregoryi SP2]
gi|445613302|gb|ELY67007.1| 3-isopropylmalate dehydratase small subunit [Natronobacterium
gregoryi SP2]
Length = 213
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 60/104 (57%), Gaps = 8/104 (7%)
Query: 78 GDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYK---II 134
G++IDTDQIIPA ++ +V ++ LG +A L T D + +++ ++
Sbjct: 24 GNDIDTDQIIPARFMKVVT-----FDGLGEFAFFDLRFTEDDELKDHPMNEERFQDSSVM 78
Query: 135 IAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG 178
+ NFGCGSSREHAP AL G A+V ES+A IF N +A G
Sbjct: 79 VVNNNFGCGSSREHAPQALMRWGIDAIVGESFAEIFAGNCLALG 122
>gi|291519678|emb|CBK74899.1| 3-isopropylmalate dehydratase, small subunit [Butyrivibrio
fibrisolvens 16/4]
Length = 155
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 86/164 (52%), Gaps = 21/164 (12%)
Query: 80 NIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKIIIAGGN 139
++DTDQII ++YL L P+ +++ +A L + +T++ ++A N
Sbjct: 10 DVDTDQIIASQYL-LFPT----IDEMKVHAFESLNSDFTSQV-------KPGDFVVADEN 57
Query: 140 FGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEECSTGDVV 199
FGCGSSRE AP L A G AVVA+S+ARIF+RNS+ G P+ L + GD +
Sbjct: 58 FGCGSSREQAPAVLKALGVKAVVAKSFARIFYRNSINIG--MPVIVSKELYDAVKDGDEM 115
Query: 200 TIEIAESRLINHTTGKEY---KLKPIGDLGPVIDAGGIFAYARK 240
+++ + G+ Y KL P + ++D GG+ A K
Sbjct: 116 DLDLLSGVIT--VNGQSYSCTKLPP--KMQEILDQGGLIASLDK 155
>gi|238920066|ref|YP_002933581.1| 3-isopropylmalate dehydratase small subunit 1, putative
[Edwardsiella ictaluri 93-146]
gi|238869635|gb|ACR69346.1| 3-isopropylmalate dehydratase small subunit 1, putative
[Edwardsiella ictaluri 93-146]
Length = 167
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 87/174 (50%), Gaps = 17/174 (9%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
HG + GDNI+TD I P +Y+ L + Y + + + +
Sbjct: 5 LHGNVWKFGDNINTDIISPPQYMEL------SIAEAAPYCMSAVNPDFAAQV-------R 51
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
I++AG N G GSSRE +P+ L G AVVA S+ARIF+RN + G P S R
Sbjct: 52 PGDILVAGNNLGSGSSRETSPLTLRYLGIQAVVACSFARIFYRNCINLG--IPALSAPR- 108
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARKTG 242
+E GD ++I+IA+ + N T + Y + D + +I AGG+ + R+TG
Sbjct: 109 ADEIRQGDALSIDIAQGIIHNITQQEIYPCTRLPDNIMAMIRAGGLVNHLRQTG 162
>gi|434407553|ref|YP_007150438.1| 3-isopropylmalate dehydratase, small subunit [Cylindrospermum
stagnale PCC 7417]
gi|428261808|gb|AFZ27758.1| 3-isopropylmalate dehydratase, small subunit [Cylindrospermum
stagnale PCC 7417]
Length = 225
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 56/103 (54%), Gaps = 5/103 (4%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKIII 135
++G++IDTD+IIPA YL V ++ LG I + KI+I
Sbjct: 38 LIGNDIDTDRIIPARYLKAV-----TFDGLGEGVFIDDRKALNGEHTFDQPQYQGAKILI 92
Query: 136 AGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG 178
NFGCGSSREHAP AL G AV+ ES+A IFF N VA G
Sbjct: 93 VNRNFGCGSSREHAPQALAKWGIQAVIGESFAEIFFGNCVAMG 135
>gi|282896921|ref|ZP_06304927.1| 3-isopropylmalate dehydratase small subunit region protein
[Raphidiopsis brookii D9]
gi|281198330|gb|EFA73220.1| 3-isopropylmalate dehydratase small subunit region protein
[Raphidiopsis brookii D9]
Length = 197
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 75/142 (52%), Gaps = 12/142 (8%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKIII 135
+VGD+IDTD+IIPA YL + ++ LG A I + + K++I
Sbjct: 15 LVGDDIDTDRIIPARYLKAI-----TFDGLGEGAFIDDRKALNGQHPFDLPQYQGAKVLI 69
Query: 136 AGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSE---ARLCEE 192
NFGCGSSREHAP AL G ++ ES+A IFF N VA G I + +E R +E
Sbjct: 70 VNRNFGCGSSREHAPQALAKWGIRGIIGESFAEIFFGNCVAMG-IPCVTAEPGIVRQLQE 128
Query: 193 CSTGD---VVTIEIAESRLINH 211
T D +VTI++ ++ H
Sbjct: 129 LVTADPQALVTIDVENLQVQIH 150
>gi|448432367|ref|ZP_21585503.1| 3-isopropylmalate dehydratase, small subunit [Halorubrum
tebenquichense DSM 14210]
gi|445687251|gb|ELZ39543.1| 3-isopropylmalate dehydratase, small subunit [Halorubrum
tebenquichense DSM 14210]
Length = 218
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/112 (41%), Positives = 64/112 (57%), Gaps = 20/112 (17%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT------ 129
V G++IDTDQIIPA ++ +V ++ LG ++ + RF DE+ K
Sbjct: 26 VRGNDIDTDQIIPARFMKVVT-----FDGLGQFSF------FDQRFDDEDNEKDHPFNEE 74
Query: 130 KYK---IIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG 178
+Y+ I++ NFGCGSSREHAP AL G AVV ES+A IF N +A G
Sbjct: 75 QYRGANILVVNANFGCGSSREHAPQALMRWGIDAVVGESFAEIFAGNCLALG 126
>gi|427718578|ref|YP_007066572.1| 3-isopropylmalate dehydratase small subunit [Calothrix sp. PCC
7507]
gi|427351014|gb|AFY33738.1| 3-isopropylmalate dehydratase, small subunit [Calothrix sp. PCC
7507]
Length = 202
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/155 (36%), Positives = 74/155 (47%), Gaps = 22/155 (14%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKIII 135
+VG++IDTD+IIPA YL V ++ LG A I + K+++
Sbjct: 15 LVGNDIDTDRIIPARYLKAVT-----FDGLGEGAFIDDRKALKGEHPFDQSQYQGAKVLV 69
Query: 136 AGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEECST 195
NFGCGSSREHAP AL G A++ ES+A IFF N VA G P C T
Sbjct: 70 VNRNFGCGSSREHAPQALAKWGIQALIGESFAEIFFGNCVAMG--IP----------CVT 117
Query: 196 GDVVTIE-----IAESRLINHTTGKEYKLKPIGDL 225
DV I+ IA + ++ T E IGD
Sbjct: 118 ADVTNIKKLQELIAANPQVDVTVNLETLQVQIGDF 152
>gi|300087475|ref|YP_003757997.1| 3-isopropylmalate dehydratase small subunit [Dehalogenimonas
lykanthroporepellens BL-DC-9]
gi|299527208|gb|ADJ25676.1| 3-isopropylmalate dehydratase, small subunit [Dehalogenimonas
lykanthroporepellens BL-DC-9]
Length = 164
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 88/177 (49%), Gaps = 20/177 (11%)
Query: 69 TFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETK 128
G + GDNI TD I P + L + P+ L + L T+ R
Sbjct: 1 MLKGKAFKFGDNISTDLIAPGRLVHLRSNLPE----LAKHVLEDADPTFAARV------- 49
Query: 129 TKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEAR 188
++ G NFG GSSREHAPV + +G +AV+A+S ARIFFRN++ G P+
Sbjct: 50 KPGDFVVGGSNFGLGSSREHAPVIIKMSGVAAVLAKSVARIFFRNAINVG--LPV----L 103
Query: 189 LC--EECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARKTG 242
+C ++ + GD + +++A + N T G+ I D + +++ GG+ Y +K G
Sbjct: 104 VCDTDKINDGDELEVDLASGVIRNRTNGEVLSSGKIPDAMLSILNEGGLKPYIKKHG 160
>gi|291522455|emb|CBK80748.1| 3-isopropylmalate dehydratase, small subunit [Coprococcus catus
GD/7]
Length = 162
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 92/170 (54%), Gaps = 17/170 (10%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + +++DTDQII ++YL L+P+ E++ ++ T+ ++ D +
Sbjct: 5 GTIFKFYNDLDTDQIIASQYL-LLPN----LEEMKAH-------TFESQDPDFAKKVKPG 52
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
++AG NFGCGSSRE AP L A G AV+A+S+ARIFFRN++ G P L +
Sbjct: 53 DYVVAGENFGCGSSREQAPGVLKALGVKAVIAKSFARIFFRNAINIG--LPAIVCKDLPD 110
Query: 192 ECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
+ TGD + + ++E + GK Y + + + +++ GG+ A K
Sbjct: 111 DVQTGDTIELHMSEGTV--EANGKTYTCTKLPEYMQHILNQGGLIASLNK 158
>gi|428311929|ref|YP_007122906.1| 3-isopropylmalate dehydratase small subunit [Microcoleus sp. PCC
7113]
gi|428253541|gb|AFZ19500.1| 3-isopropylmalate dehydratase, small subunit [Microcoleus sp. PCC
7113]
Length = 201
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/107 (45%), Positives = 64/107 (59%), Gaps = 13/107 (12%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENE-TKTKYK-- 132
+VG++IDTD+IIPA +L V ++ LG A A T+ E+ + +Y+
Sbjct: 14 LVGNDIDTDRIIPARFLRCV-----TFDGLGEQAF----ADDRTQAKGEHPFDQPQYQGA 64
Query: 133 -IIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG 178
I++ GNFGCGSSREHAP AL G A+V ESYA IFF N VA G
Sbjct: 65 NILVVNGNFGCGSSREHAPQALSKWGIQAIVGESYAEIFFGNCVAIG 111
>gi|154686961|ref|YP_001422122.1| isopropylmalate isomerase small subunit [Bacillus amyloliquefaciens
FZB42]
gi|384266371|ref|YP_005422078.1| isopropylmalate isomerase small subunit [Bacillus amyloliquefaciens
subsp. plantarum YAU B9601-Y2]
gi|385265708|ref|ZP_10043795.1| isopropylmalate isomerase small subunit [Bacillus sp. 5B6]
gi|387899408|ref|YP_006329704.1| 3-isopropylmalate dehydratase [Bacillus amyloliquefaciens Y2]
gi|394991890|ref|ZP_10384686.1| isopropylmalate isomerase small subunit [Bacillus sp. 916]
gi|429506114|ref|YP_007187298.1| isopropylmalate isomerase small subunit [Bacillus amyloliquefaciens
subsp. plantarum AS43.3]
gi|451346026|ref|YP_007444657.1| isopropylmalate isomerase small subunit [Bacillus amyloliquefaciens
IT-45]
gi|166989797|sp|A7Z7B5.1|LEUD_BACA2 RecName: Full=3-isopropylmalate dehydratase small subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|154352812|gb|ABS74891.1| LeuD [Bacillus amyloliquefaciens FZB42]
gi|380499724|emb|CCG50762.1| isopropylmalate isomerase small subunit [Bacillus amyloliquefaciens
subsp. plantarum YAU B9601-Y2]
gi|385150204|gb|EIF14141.1| isopropylmalate isomerase small subunit [Bacillus sp. 5B6]
gi|387173518|gb|AFJ62979.1| 3-isopropylmalate dehydratase [Bacillus amyloliquefaciens Y2]
gi|393807249|gb|EJD68572.1| isopropylmalate isomerase small subunit [Bacillus sp. 916]
gi|429487704|gb|AFZ91628.1| isopropylmalate isomerase small subunit [Bacillus amyloliquefaciens
subsp. plantarum AS43.3]
gi|449849784|gb|AGF26776.1| isopropylmalate isomerase small subunit [Bacillus amyloliquefaciens
IT-45]
Length = 199
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 81/166 (48%), Gaps = 25/166 (15%)
Query: 65 EPTATFHGLCYVVGD-NIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFID 123
EP T G V+ N+DTDQIIP ++L + E+ G G A + R+++
Sbjct: 2 EPLKTHTGKAAVLNRINVDTDQIIPKQFLKRI-------ERTG----YGRFAFFDWRYLE 50
Query: 124 ENETKTKYK----------IIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRN 173
E +++ I+IAG NFGCGSSREHAP AL G ++A S+A IF +N
Sbjct: 51 NGEPDPEFELNRKVYEGASILIAGENFGCGSSREHAPWALDDYGFKIIIAPSFADIFHQN 110
Query: 174 SVATGEI---YPLDSEARLCEECSTGDVVTIEIAESRLINHTTGKE 216
G + P D +L + + E++LI+ + GKE
Sbjct: 111 CFKNGMLPIRMPYDQWKKLAGQYENQSLNMTVDLENQLIHDSEGKE 156
>gi|239626909|ref|ZP_04669940.1| 3-isopropylmalate dehydratase small subunit 1 [Clostridiales
bacterium 1_7_47_FAA]
gi|239517055|gb|EEQ56921.1| 3-isopropylmalate dehydratase small subunit 1 [Clostridiales
bacterium 1_7_47FAA]
Length = 163
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/176 (37%), Positives = 96/176 (54%), Gaps = 24/176 (13%)
Query: 69 TFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETK 128
TF G +V+GD+IDTD IIP EYL L + + Y L + I+E +
Sbjct: 3 TFTGKVWVLGDDIDTDIIIPTEYLAL-----KTIDDMKQYGFSPLRPELAGQ-IEEGD-- 54
Query: 129 TKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEAR 188
II+AG NFGCGSSRE AP + A G V+A+S+ARIFFRNS+ G + L +
Sbjct: 55 ----IIVAGKNFGCGSSREQAPEIIKALGIRCVIAKSFARIFFRNSINNGLL--LIEQPD 108
Query: 189 LCEECSTGDVVTIEIAESRLINHTT---GKEYKLKPI-GDLGPVIDAGGIFAYARK 240
L ++ + GD +T+ +NH G++Y + + +L +I+AGG+ RK
Sbjct: 109 LYDDMTEGDPITVT------VNHHVDYKGRQYPIASLPQNLVDIINAGGLVKAMRK 158
>gi|308174523|ref|YP_003921228.1| 3-isopropylmalate dehydratase small subunit [Bacillus
amyloliquefaciens DSM 7]
gi|384160355|ref|YP_005542428.1| isopropylmalate isomerase small subunit [Bacillus amyloliquefaciens
TA208]
gi|384165292|ref|YP_005546671.1| 3-isopropylmalate dehydratase small subunit [Bacillus
amyloliquefaciens LL3]
gi|384169434|ref|YP_005550812.1| isopropylmalate isomerase small subunit [Bacillus amyloliquefaciens
XH7]
gi|307607387|emb|CBI43758.1| 3-isopropylmalate dehydratase (small subunit) [Bacillus
amyloliquefaciens DSM 7]
gi|328554443|gb|AEB24935.1| isopropylmalate isomerase small subunit [Bacillus amyloliquefaciens
TA208]
gi|328912847|gb|AEB64443.1| 3-isopropylmalate dehydratase (small subunit) [Bacillus
amyloliquefaciens LL3]
gi|341828713|gb|AEK89964.1| isopropylmalate isomerase small subunit [Bacillus amyloliquefaciens
XH7]
Length = 199
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 87/167 (52%), Gaps = 27/167 (16%)
Query: 65 EPTATFHGLCYVVGD-NIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFID 123
EP T G V+ N+DTDQIIP ++L + E+ G G A + R+++
Sbjct: 2 EPLKTHTGKAAVLNRINVDTDQIIPKQFLKRI-------ERTG----YGRFAFFDWRYLE 50
Query: 124 ENETKTKYK----------IIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRN 173
E +++ I+IAG NFGCGSSREHAP AL G ++A S+A IF +N
Sbjct: 51 NGEPDPEFELNRQVYEGASILIAGENFGCGSSREHAPWALDDYGFKIIIAPSFADIFHQN 110
Query: 174 SVATGEI---YPLDSEARL-CEECSTGDVVTIEIAESRLINHTTGKE 216
G + P D +L C+ + +T+++ E++LI+ + G+E
Sbjct: 111 CFKNGMLPIRMPYDQWKKLACQYENQSLNMTVDL-ENQLIHDSEGRE 156
>gi|18978052|ref|NP_579409.1| 3-isopropylmalate dehydratase small subunit [Pyrococcus furiosus
DSM 3638]
gi|397652671|ref|YP_006493252.1| 3-isopropylmalate dehydratase small subunit [Pyrococcus furiosus
COM1]
gi|23396652|sp|Q8U0B9.1|LEUD2_PYRFU RecName: Full=3-isopropylmalate dehydratase small subunit 2;
AltName: Full=Alpha-IPM isomerase 2; Short=IPMI 2;
AltName: Full=Isopropylmalate isomerase 2
gi|18893839|gb|AAL81804.1| putative 3-isopropylmalate dehydratase small subunit [Pyrococcus
furiosus DSM 3638]
gi|393190262|gb|AFN04960.1| 3-isopropylmalate dehydratase small subunit [Pyrococcus furiosus
COM1]
Length = 164
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 87/178 (48%), Gaps = 28/178 (15%)
Query: 71 HGLCYVVGDNIDTDQIIPAEY-LTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
G + GDNI TD I P Y LT +P+E K+ FI+E +
Sbjct: 4 RGRVWKFGDNISTDAITPGRYNLT---KDPNELAKIA--------------FIEERPEFS 46
Query: 130 KY----KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDS 185
K +++ G NFG GSSRE A +AL AAG V+A+S+ RIFFRN+V G + +
Sbjct: 47 KEVKPGDVVVGGKNFGIGSSRESAALALKAAGVGGVIAKSFGRIFFRNAVNLGLPLLIGN 106
Query: 186 EARLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARKTG 242
L + G++V + S + G+ K KP+ L +++ GGI Y R+ G
Sbjct: 107 TDPLLD----GEIVEVN-WRSGEVKKEDGEVLKFKPLDSFLLAIVEEGGIIEYIRRRG 159
>gi|448667243|ref|ZP_21685785.1| 3-isopropylmalate dehydratase small subunit [Haloarcula amylolytica
JCM 13557]
gi|445770278|gb|EMA21342.1| 3-isopropylmalate dehydratase small subunit [Haloarcula amylolytica
JCM 13557]
Length = 214
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 61/112 (54%), Gaps = 20/112 (17%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT------ 129
+ G++IDTDQIIPA ++ +V ++ LG +A L RF DE+ K
Sbjct: 21 IRGNDIDTDQIIPARFMKVVT-----FDGLGEFAFFDL------RFDDEDNEKNHPFNEE 69
Query: 130 ---KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG 178
+++ NFGCGSSREHAP AL G A++ ES+A IF N +A G
Sbjct: 70 RFQDSNVMVVNNNFGCGSSREHAPQALMRWGIDAIIGESFAEIFAGNCLALG 121
>gi|410667260|ref|YP_006919631.1| 3-isopropylmalate dehydratase small subunit [Thermacetogenium
phaeum DSM 12270]
gi|409105007|gb|AFV11132.1| 3-isopropylmalate dehydratase small subunit 2 [Thermacetogenium
phaeum DSM 12270]
Length = 166
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 93/178 (52%), Gaps = 24/178 (13%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
G + G++++TD II +Y +++ L L A + +D + +
Sbjct: 3 LRGRAHCFGNDVNTDYIISGKY---------KFKTLDMKEL----AQHVMEDLDPDFARK 49
Query: 130 KY--KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEA 187
++AG NFGCGSSRE AP+AL AG AV+A+S+ARIF+RN++ TG P+
Sbjct: 50 VQPGDFVVAGRNFGCGSSREQAPLALLNAGVGAVLAQSFARIFYRNAINTG--LPV---- 103
Query: 188 RLCEECS--TGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARKTG 242
+C+ S +GD + + + L N T G E +KP+ + ++ GG+ + RK G
Sbjct: 104 VVCDTSSIRSGDELVVNLERGVLKNLTQGTETPIKPLPPFMLKILADGGLVEHFRKYG 161
>gi|296120593|ref|YP_003628371.1| 3-isopropylmalate dehydratase small subunit [Planctomyces
limnophilus DSM 3776]
gi|296012933|gb|ADG66172.1| 3-isopropylmalate dehydratase, small subunit [Planctomyces
limnophilus DSM 3776]
Length = 203
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 62/105 (59%), Gaps = 16/105 (15%)
Query: 79 DNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDE----NETKTK-YKI 133
D+IDTD+IIPA +L V ++ LG +A R D N+ + + KI
Sbjct: 18 DDIDTDRIIPARFLRCV-----TFDGLGEHAF------EDDRIQDPSHPFNQAQFQGSKI 66
Query: 134 IIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG 178
++AG NFGCGSSREHAP AL G A++AESYA IFF N V+ G
Sbjct: 67 LVAGRNFGCGSSREHAPQALMRWGIQAIIAESYAEIFFGNCVSLG 111
>gi|14520654|ref|NP_126129.1| 3-isopropylmalate dehydratase small subunit [Pyrococcus abyssi GE5]
gi|23396687|sp|Q9V1I9.1|LEUD2_PYRAB RecName: Full=3-isopropylmalate dehydratase small subunit 2;
AltName: Full=Alpha-IPM isomerase 2; Short=IPMI 2;
AltName: Full=Isopropylmalate isomerase 2
gi|5457870|emb|CAB49360.1| leuD-2 3-isopropylmalate dehydratase, small subunit [Pyrococcus
abyssi GE5]
gi|380741185|tpe|CCE69819.1| TPA: 3-isopropylmalate dehydratase small subunit [Pyrococcus abyssi
GE5]
Length = 163
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 90/178 (50%), Gaps = 31/178 (17%)
Query: 72 GLCYVVGDNIDTDQIIPAEY-LTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTK 130
G + DN+ TD+I P Y LT P ++L A I + + E +
Sbjct: 5 GRVWKFWDNVSTDEITPGRYNLTKDP------QELARIAFIEVRPEFA-------EKVRR 51
Query: 131 YKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPL---DSEA 187
+++ G NFG GSSRE A +AL AAG S ++A+S+ RIF+RN+V G PL D+
Sbjct: 52 GDVVVGGKNFGIGSSRESAALALKAAGVSGIIAKSFGRIFYRNAVNLG--IPLLIGDT-- 107
Query: 188 RLCEECSTGDVVTI--EIAESRLINHTTGKEYKLKPI-GDLGPVIDAGGIFAYARKTG 242
+E GDV+T+ E E R G+ + +P+ G L ++ GGI + R+ G
Sbjct: 108 ---DELEDGDVITVNWETGEVR----KNGQTLQFEPLPGFLLEIVREGGILEFIRRRG 158
>gi|374325746|ref|YP_005083946.1| 3-isopropylmalate dehydratase small subunit [Pyrobaculum sp. 1860]
gi|356641015|gb|AET31694.1| 3-isopropylmalate dehydratase small subunit [Pyrobaculum sp. 1860]
Length = 136
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/118 (38%), Positives = 69/118 (58%), Gaps = 3/118 (2%)
Query: 124 ENETKTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPL 183
E K K +++AG FG GSSRE A +AL AG AVVAES+ARIFFRN+V G P+
Sbjct: 19 EFPKKAKGAVLVAGKAFGMGSSREQAAIALKGAGVLAVVAESFARIFFRNAVNVG--LPV 76
Query: 184 DSEARLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLG-PVIDAGGIFAYARK 240
+ + GD + +++ + N TTG++ KP+ L ++ AGG+ +Y ++
Sbjct: 77 LQAPGIRQRVREGDELEVDVESGTVKNLTTGEDVVGKPLRGLPLEILKAGGLLSYLKR 134
>gi|254167077|ref|ZP_04873930.1| 3-isopropylmalate dehydratase, small subunit subfamily
[Aciduliprofundum boonei T469]
gi|197623933|gb|EDY36495.1| 3-isopropylmalate dehydratase, small subunit subfamily
[Aciduliprofundum boonei T469]
Length = 168
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 86/172 (50%), Gaps = 16/172 (9%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + GDNI TD I P Y L + P+ L + L + +
Sbjct: 7 GKVWKFGDNISTDHIAPGRYFHLRTNLPE----LAKHVLEDADPEFPKKV-------KPG 55
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
II+AG NFG GSSREHAP + AG + V+A+S+ARIF+RN+ G PL + +
Sbjct: 56 DIIVAGNNFGLGSSREHAPRIIKIAGVNCVIAKSFARIFYRNAFNIG--LPLLTAD--TD 111
Query: 192 ECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARKTG 242
+ GD + I++ + + + T G E + PI + +++ GGI + +K G
Sbjct: 112 KIDEGDELEIDLEKGIIKDLTKGIELQSTPIPPFMMRLLEDGGIVEHIKKHG 163
>gi|217968012|ref|YP_002353518.1| 3-isopropylmalate dehydratase small subunit [Dictyoglomus turgidum
DSM 6724]
gi|217337111|gb|ACK42904.1| 3-isopropylmalate dehydratase, small subunit [Dictyoglomus turgidum
DSM 6724]
Length = 166
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 86/173 (49%), Gaps = 17/173 (9%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + GD+I+TD II +Y ++ ++ + L + + T
Sbjct: 5 GKAHKFGDDINTDYIISGKY----KFKSLDFNEMSKHLFEDLDPDFYKKI-------TPG 53
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
II+AG NFGCGSSRE AP+ + AG S V+A+S+ARIF+RNS+ G PL EA
Sbjct: 54 DIIVAGKNFGCGSSREQAPLVIKHAGISLVIAKSFARIFYRNSINVG--LPL-LEAD-TN 109
Query: 192 ECSTGDVVTIEIAESRLINHTTGKEYKLKPI--GDLGPVIDAGGIFAYARKTG 242
+ GD + +++ ++ N T K + ++ AGG+ Y +K G
Sbjct: 110 QIDQGDELEVDLFNGKIFNKTKNVVINSKSTFPDIMVKILQAGGLVEYLKKEG 162
>gi|225158961|ref|ZP_03725273.1| 3-isopropylmalate dehydratase, small subunit [Diplosphaera
colitermitum TAV2]
gi|224802456|gb|EEG20716.1| 3-isopropylmalate dehydratase, small subunit [Diplosphaera
colitermitum TAV2]
Length = 201
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/111 (43%), Positives = 66/111 (59%), Gaps = 16/111 (14%)
Query: 75 YVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALI-------GLPATYTTRFIDENET 127
YV G++IDTD+IIPA ++ V ++ LG + G+P + ID+ E
Sbjct: 15 YVPGNDIDTDRIIPARFMKCV-----TFDGLGEFLFYDVRHTPEGVPCGHP---IDKPEH 66
Query: 128 KTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG 178
K I+++G NFGCGSSREHAP A+ AG AV+AE++A IFF NS G
Sbjct: 67 KGA-TILLSGANFGCGSSREHAPQAIHKAGFRAVIAENFAEIFFGNSTTLG 116
>gi|440684809|ref|YP_007159604.1| 3-isopropylmalate dehydratase, small subunit [Anabaena cylindrica
PCC 7122]
gi|428681928|gb|AFZ60694.1| 3-isopropylmalate dehydratase, small subunit [Anabaena cylindrica
PCC 7122]
Length = 202
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 64/114 (56%), Gaps = 27/114 (23%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENET-------- 127
++G++IDTD+IIPA YL V ++ LG T FID+ +
Sbjct: 15 LIGNDIDTDRIIPARYLKAVT-----FDGLG-----------TGVFIDDRKALNGQHPFD 58
Query: 128 KTKY---KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG 178
+T+Y KI+I NFGCGSSREHAP AL G A++ ES+A IFF N VA G
Sbjct: 59 QTQYQGAKILIVNRNFGCGSSREHAPQALAKWGIKALIGESFAEIFFGNCVAMG 112
>gi|340344290|ref|ZP_08667422.1| 3-isopropylmalate dehydratase, small subunit [Candidatus
Nitrosoarchaeum koreensis MY1]
gi|339519431|gb|EGP93154.1| 3-isopropylmalate dehydratase, small subunit [Candidatus
Nitrosoarchaeum koreensis MY1]
Length = 194
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 70/131 (53%), Gaps = 24/131 (18%)
Query: 80 NIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY-------- 131
N+DTDQI+P ++L LV +K G G Y R+ D+ + K+ +
Sbjct: 18 NVDTDQIVPKQFLKLV-------QKSG----FGKFLFYNWRYNDQEQLKSDFVLNESKYK 66
Query: 132 --KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
KI++AG NFGCGSSREHA AL G S V+A S+A IF+ N G + P+ + +
Sbjct: 67 NSKILVAGDNFGCGSSREHAVWALLDYGFSVVIAPSFADIFYSNCFKNG-LLPIVLDEKT 125
Query: 190 CE--ECSTGDV 198
E + TGDV
Sbjct: 126 IEKLQLETGDV 136
>gi|366164762|ref|ZP_09464517.1| aconitate hydratase domain-containing protein [Acetivibrio
cellulolyticus CD2]
Length = 174
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 90/180 (50%), Gaps = 16/180 (8%)
Query: 69 TFHG-LCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENET 127
TF G + ++ +I+TD+IIPA+YLT + E L Y L L D +
Sbjct: 3 TFSGKVLFLDRSDINTDEIIPAKYLTEITK-----EALKPYVLEDL----ILESFDPKKD 53
Query: 128 KTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEI---YPLD 184
+ ++I NFGCGSSREHAP AL + V+A+S+ARIF +N G P D
Sbjct: 54 ISGKSVVITRENFGCGSSREHAPWALEVNDINVVIAQSFARIFRQNMYNCGMFAIELPKD 113
Query: 185 SEARLCEECSTGDV-VTIEIAESRLINHTTGKEYKLK-PIGDLGP-VIDAGGIFAYARKT 241
L + S DV +T+++ ++I + GK ++ +GD ++ GG YA K
Sbjct: 114 KIDYLFDTYSKKDVTLTVDVDRDKIIVESQGKSEEIDFKVGDFDKTLVKEGGWVGYADKN 173
>gi|167748768|ref|ZP_02420895.1| hypothetical protein ANACAC_03542 [Anaerostipes caccae DSM 14662]
gi|317470391|ref|ZP_07929781.1| 3-isopropylmalate dehydratase [Anaerostipes sp. 3_2_56FAA]
gi|167651738|gb|EDR95867.1| isopropylmalate/citramalate isomerase small subunit [Anaerostipes
caccae DSM 14662]
gi|316902119|gb|EFV24043.1| 3-isopropylmalate dehydratase [Anaerostipes sp. 3_2_56FAA]
Length = 158
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 91/163 (55%), Gaps = 17/163 (10%)
Query: 79 DNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKIIIAGG 138
+++DTDQII ++YL L+P+ E++ YA + ++ + + E + I++AG
Sbjct: 9 NDVDTDQIIASQYL-LLPN----IEEMKVYAFESIDPDFSKK-VQEGD------IVVAGE 56
Query: 139 NFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEECSTGDV 198
NFGCGSSRE AP L A G A+VA+S+ARIF+RN++ G P+ L ++ + D
Sbjct: 57 NFGCGSSREQAPSVLKALGVKAIVAKSFARIFYRNAINIG--LPVVISPDLYDKVNQMDE 114
Query: 199 VTIEIAESRL-INHTTGKEYKLKPIGDLGPVIDAGGIFAYARK 240
+ +++ E + T KL P + ++D GG+ + +
Sbjct: 115 IELDLTEGFIKTEDETLPCTKLPPY--MQNILDHGGLINFLNE 155
>gi|325915295|ref|ZP_08177615.1| 3-isopropylmalate dehydratase, small subunit [Xanthomonas
vesicatoria ATCC 35937]
gi|325538488|gb|EGD10164.1| 3-isopropylmalate dehydratase, small subunit [Xanthomonas
vesicatoria ATCC 35937]
Length = 215
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/155 (36%), Positives = 79/155 (50%), Gaps = 22/155 (14%)
Query: 80 NIDTDQIIPAEYLTLV------PSNPDEYEKLGSYALIGLPATYTTR------FIDENET 127
N+DTDQIIP ++L + P+ DE+ Y IG P +R F+
Sbjct: 18 NVDTDQIIPKQFLKSIKRTGFGPNLFDEWR----YLDIGEPGRDNSRRPLNPEFVLNFPR 73
Query: 128 KTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEA 187
+++A NFGCGSSREHAP AL G V+A S+A IFF NS G + + EA
Sbjct: 74 YQGASVLLARENFGCGSSREHAPWALDEYGFRTVIAPSFADIFFNNSFKNGLLPIVLDEA 133
Query: 188 R---LCEEC--STGDVVTIEIAESRLINHTTGKEY 217
L E+C + G +T+++AE R + G EY
Sbjct: 134 DVDALFEQCLANEGYQLTVDLAEQR-VRRPDGVEY 167
>gi|296139263|ref|YP_003646506.1| aconitate hydratase domain-containing protein [Tsukamurella
paurometabola DSM 20162]
gi|296027397|gb|ADG78167.1| aconitate hydratase domain protein [Tsukamurella paurometabola DSM
20162]
Length = 209
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 64/104 (61%), Gaps = 8/104 (7%)
Query: 78 GDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIG--LPATYTTRFID-ENETKTKYKII 134
GD+IDTD+IIPA YL L P+ ++ LG + G L A R ++E++ +I+
Sbjct: 21 GDDIDTDRIIPARYLKL-PT----FDTLGEHVFEGDRLNAAALGRVHPFDDESRVGARIL 75
Query: 135 IAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG 178
++G NFGCGSSREHAP AL G +A++A SY IF N+ G
Sbjct: 76 LSGANFGCGSSREHAPQALNRWGIAAIIAVSYGEIFRDNAATIG 119
>gi|319647221|ref|ZP_08001443.1| 3-isopropylmalate dehydratase small subunit [Bacillus sp. BT1B_CT2]
gi|317390568|gb|EFV71373.1| 3-isopropylmalate dehydratase small subunit [Bacillus sp. BT1B_CT2]
Length = 199
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 84/162 (51%), Gaps = 26/162 (16%)
Query: 65 EPTATFHGLCYVVGD-NIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFID 123
EP T +G+ V+ N+DTDQIIP ++L + E+ G G A + R++D
Sbjct: 2 EPLKTHNGIAAVLNRINVDTDQIIPKQFLKRI-------ERTG----YGRFAFFDWRYLD 50
Query: 124 ENE-------TKTKYK---IIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRN 173
+ + +YK I+IAG NFGCGSSREHAP AL G ++A S+A IF +N
Sbjct: 51 NGDPNPDFELNRPEYKGASILIAGENFGCGSSREHAPWALDDYGFKIIIAPSFADIFHQN 110
Query: 174 SVATGEI---YPLDSEARLCEECSTGDV-VTIEIAESRLINH 211
G + P ++ L E+ + +T+++ + + +H
Sbjct: 111 CFKNGMLPIRLPYEAWKELAEQYEYQSLTMTVDLEKQTITDH 152
>gi|52081308|ref|YP_080099.1| isopropylmalate isomerase small subunit [Bacillus licheniformis DSM
13 = ATCC 14580]
gi|404490187|ref|YP_006714293.1| isopropylmalate isomerase small subunit [Bacillus licheniformis DSM
13 = ATCC 14580]
gi|423683287|ref|ZP_17658126.1| isopropylmalate isomerase small subunit [Bacillus licheniformis
WX-02]
gi|81609012|sp|Q65GJ1.1|LEUD_BACLD RecName: Full=3-isopropylmalate dehydratase small subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|52004519|gb|AAU24461.1| 3-isopropylmalate dehydratase (small subunit) [Bacillus
licheniformis DSM 13 = ATCC 14580]
gi|52349189|gb|AAU41823.1| 3-isopropylmalate dehydratase small subunit LeuD [Bacillus
licheniformis DSM 13 = ATCC 14580]
gi|383440061|gb|EID47836.1| isopropylmalate isomerase small subunit [Bacillus licheniformis
WX-02]
Length = 199
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 84/162 (51%), Gaps = 26/162 (16%)
Query: 65 EPTATFHGLCYVVGD-NIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFID 123
EP T +G+ V+ N+DTDQIIP ++L + E+ G G A + R++D
Sbjct: 2 EPLKTHNGIAAVLNRINVDTDQIIPKQFLKRI-------ERTG----YGRFAFFDWRYLD 50
Query: 124 ENE-------TKTKYK---IIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRN 173
+ + +YK I+IAG NFGCGSSREHAP AL G ++A S+A IF +N
Sbjct: 51 NGDPNPDFELNRPEYKGASILIAGENFGCGSSREHAPWALDDYGFKIIIAPSFADIFHQN 110
Query: 174 SVATGEI---YPLDSEARLCEECSTGDV-VTIEIAESRLINH 211
G + P ++ L E+ + +T+++ + + +H
Sbjct: 111 CFKNGMLPIRLPYEAWKELAEQYEYQSLTMTVDLEKQTITDH 152
>gi|448688873|ref|ZP_21694610.1| 3-isopropylmalate dehydratase small subunit [Haloarcula japonica
DSM 6131]
gi|445778743|gb|EMA29685.1| 3-isopropylmalate dehydratase small subunit [Haloarcula japonica
DSM 6131]
Length = 214
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 61/112 (54%), Gaps = 20/112 (17%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETK------- 128
+ G++IDTDQIIPA ++ +V ++ LG +A L RF DE+ K
Sbjct: 21 IRGNDIDTDQIIPARFMKVVT-----FDGLGEFAFFDL------RFDDEDNEKDHPFNEE 69
Query: 129 --TKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG 178
+++ NFGCGSSREHAP AL G A++ ES+A IF N +A G
Sbjct: 70 RFQDSNVMVVNANFGCGSSREHAPQALMRWGIDAIIGESFAEIFAGNCLALG 121
>gi|443327577|ref|ZP_21056199.1| homoaconitate hydratase family protein/3-isopropylmalate
dehydratase, large subunit [Xenococcus sp. PCC 7305]
gi|442792836|gb|ELS02301.1| homoaconitate hydratase family protein/3-isopropylmalate
dehydratase, large subunit [Xenococcus sp. PCC 7305]
Length = 580
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/102 (45%), Positives = 62/102 (60%), Gaps = 14/102 (13%)
Query: 77 VGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKIIIA 136
+GD+I+TD IIPA T NPD ++L Y L L ++ +Y++I A
Sbjct: 14 LGDDINTDDIIPAHRTT----NPDP-DRLKHYVLEHLIGI---------DSLLQYQVIEA 59
Query: 137 GGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG 178
G NFGCGSSRE+AP+A+ AAG V A S+A IF+RNS+ G
Sbjct: 60 GANFGCGSSREYAPIAIKAAGIKLVRARSFAEIFYRNSINIG 101
>gi|375363238|ref|YP_005131277.1| isopropylmalate isomerase small subunit [Bacillus amyloliquefaciens
subsp. plantarum CAU B946]
gi|371569232|emb|CCF06082.1| isopropylmalate isomerase small subunit [Bacillus amyloliquefaciens
subsp. plantarum CAU B946]
Length = 199
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 81/166 (48%), Gaps = 25/166 (15%)
Query: 65 EPTATFHGLCYVVGD-NIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFID 123
EP T G V+ N+DTDQIIP ++L + E+ G G A + R+++
Sbjct: 2 EPLKTHTGKAAVLNRINVDTDQIIPKQFLKRI-------ERTG----YGRFAFFDWRYLE 50
Query: 124 ENETKTKYK----------IIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRN 173
E +++ I++AG NFGCGSSREHAP AL G ++A S+A IF +N
Sbjct: 51 NGEPDPEFELNRKVYEGASILVAGENFGCGSSREHAPWALDDYGFKIIIAPSFADIFHQN 110
Query: 174 SVATGEI---YPLDSEARLCEECSTGDVVTIEIAESRLINHTTGKE 216
G + P D +L + + E++LI+ + GKE
Sbjct: 111 CFKNGMLPIRMPYDQWKKLAGQYENQSLNMTVDLENQLIHDSEGKE 156
>gi|357237291|ref|ZP_09124634.1| 3-isopropylmalate dehydratase small subunit [Streptococcus criceti
HS-6]
gi|356885273|gb|EHI75473.1| 3-isopropylmalate dehydratase small subunit [Streptococcus criceti
HS-6]
Length = 197
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 83/170 (48%), Gaps = 36/170 (21%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT------ 129
++ DNIDTDQI+P ++L L+ + + G Y + Y R++D+ T+
Sbjct: 14 LMNDNIDTDQILPKQFLKLI-----DKKGFGKYLM------YEWRYLDDKYTENPDFIFN 62
Query: 130 -----KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG---EIY 181
K I+I G NFG GSSREHA AL G ++A S+ I + N + G +
Sbjct: 63 TAPYRKATILITGDNFGAGSSREHAAWALADYGFKVIIAGSFGDIHYNNDLNNGILPIVQ 122
Query: 182 PLDSEARLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLGPVIDA 231
PL+ +L + S D VT+++ + ++I+ P+GD ID
Sbjct: 123 PLEVRQKLA-QLSPTDQVTVDLPQQKIIS----------PVGDFDFEIDG 161
>gi|336477296|ref|YP_004616437.1| 3-isopropylmalate dehydratase small subunit [Methanosalsum zhilinae
DSM 4017]
gi|335930677|gb|AEH61218.1| 3-isopropylmalate dehydratase, small subunit [Methanosalsum
zhilinae DSM 4017]
Length = 169
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 92/183 (50%), Gaps = 23/183 (12%)
Query: 63 TKEPTATFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFI 122
KEP +G + GD+I TD I P Y L + P+ + + A P+
Sbjct: 1 MKEP---INGKAWKFGDDISTDLIAPGRYFHLRTNLPELAKHVLEDADPEFPSNVNPG-- 55
Query: 123 DENETKTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYP 182
++AG NFG GSSREHAP + AG SAV+A+S+ARIF+RN++ G P
Sbjct: 56 ---------DFVVAGRNFGLGSSREHAPTIIKLAGVSAVLAKSFARIFYRNAINVG--LP 104
Query: 183 LDSEARLC--EECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYAR 239
+ +C ++ GD + ++++ + + T G E P+ D + +++ GG+ A+
Sbjct: 105 V----LICDTDKIDEGDELEVDLSAGIIKDITKGIEITFNPLPDVMIRILNDGGLAAHIE 160
Query: 240 KTG 242
K G
Sbjct: 161 KHG 163
>gi|305664116|ref|YP_003860404.1| 3-isopropylmalate dehydratase small subunit [Ignisphaera aggregans
DSM 17230]
gi|304378685|gb|ADM28524.1| 3-isopropylmalate dehydratase, small subunit [Ignisphaera aggregans
DSM 17230]
Length = 164
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 84/173 (48%), Gaps = 24/173 (13%)
Query: 71 HGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFID-ENETKT 129
G +GD IDTD IIPA++L N A + ID E K
Sbjct: 4 RGRVIKLGDKIDTDVIIPAKHLKYTDPN--------------YLAQHVFESIDPEFYKKA 49
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
II+AG FG GSSRE A +A+ AAG AV+AES+ARIF+RN++ G P+ +
Sbjct: 50 NGAIIVAGKVFGMGSSREQAAIAIKAAGVRAVIAESFARIFYRNAINNG--LPVIVCPEI 107
Query: 190 CEECSTGD--VVTIEIAESRLINHTTGKEYKLKPIGDLG-PVIDAGGIFAYAR 239
+E GD V IE E RL N K + K I + ++ GG+ Y +
Sbjct: 108 SKEVKDGDEVEVNIETGEVRLNN----KVIRCKGITGMALEILKKGGLIEYLK 156
>gi|257126476|ref|YP_003164590.1| 3-isopropylmalate dehydratase small subunit [Leptotrichia buccalis
C-1013-b]
gi|257050415|gb|ACV39599.1| 3-isopropylmalate dehydratase, small subunit [Leptotrichia buccalis
C-1013-b]
Length = 191
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/150 (38%), Positives = 77/150 (51%), Gaps = 17/150 (11%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYT---TRFIDENETKTKYK 132
++ DNIDTDQ+IP +YL + EK G + Y T +D N K +YK
Sbjct: 14 IMNDNIDTDQLIPKQYLKSI-------EKTGFGQYVFDEWRYNEDRTDNMDFNLNKPEYK 66
Query: 133 ---IIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
I+I G NFGCGSSREHA AL G +VA Y+ IF+ N + G + EA
Sbjct: 67 TGTILITGDNFGCGSSREHAAWALQDYGFHVIVAGGYSGIFYMNWLNNGHLPITLPEADR 126
Query: 190 CEECST-GDV-VTIEIAESRLINHTTGKEY 217
E GD VT+++ ++LI GKEY
Sbjct: 127 IELSKLPGDAKVTVDLENNKLI--ANGKEY 154
>gi|282898820|ref|ZP_06306807.1| 3-isopropylmalate dehydratase small subunit region protein
[Cylindrospermopsis raciborskii CS-505]
gi|281196347|gb|EFA71257.1| 3-isopropylmalate dehydratase small subunit region protein
[Cylindrospermopsis raciborskii CS-505]
Length = 200
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 76/142 (53%), Gaps = 12/142 (8%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKIII 135
+VGD+IDTD+IIPA YL + ++ LG A I + + K++I
Sbjct: 15 LVGDDIDTDRIIPARYLKAI-----TFDGLGEGAFIDDRKALNGQHPFDLPQYQGAKVLI 69
Query: 136 AGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEA---RLCEE 192
NFGCGSSREHAP AL G ++ ES+A IFF N VA G I + +E+ R +E
Sbjct: 70 VNRNFGCGSSREHAPQALAKWGIRGIIGESFAEIFFGNCVAMG-IPCVTAESAIVRQLQE 128
Query: 193 CSTGD---VVTIEIAESRLINH 211
T D ++TI++ ++ H
Sbjct: 129 LVTADPQALLTIDVENLQVQIH 150
>gi|428226066|ref|YP_007110163.1| 3-isopropylmalate dehydratase small subunit [Geitlerinema sp. PCC
7407]
gi|427985967|gb|AFY67111.1| 3-isopropylmalate dehydratase, small subunit [Geitlerinema sp. PCC
7407]
Length = 201
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/107 (44%), Positives = 62/107 (57%), Gaps = 13/107 (12%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYAL----IGLPATYTTRFIDENETKTKY 131
+VGD+IDTD+IIPA +L V +E LG +A I L + D+ E +
Sbjct: 15 LVGDDIDTDRIIPARFLKCVT-----FEGLGQHAFADDRIQLQGEHP---FDQAEYQGA- 65
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG 178
I++ NFGCGSSREHAP A+ G A+V ES+A IFF N VA G
Sbjct: 66 SILVVNRNFGCGSSREHAPQAIAKWGIKALVGESFAEIFFGNCVAIG 112
>gi|332157975|ref|YP_004423254.1| 3-isopropylmalate dehydratase small subunit [Pyrococcus sp. NA2]
gi|331033438|gb|AEC51250.1| 3-isopropylmalate dehydratase small subunit [Pyrococcus sp. NA2]
Length = 163
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 89/178 (50%), Gaps = 31/178 (17%)
Query: 72 GLCYVVGDNIDTDQIIPAEY-LTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTK 130
G + GDN+ TD+I P Y LT P E+L A I + + ++
Sbjct: 5 GRVWKFGDNVSTDEITPGRYNLTKDP------EELAKIAFIEVRPEFA-------KSVRP 51
Query: 131 YKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPL---DSEA 187
+I+ G NFG GSSRE A +AL A+G S ++AES+ RIF+RN+V G PL D++
Sbjct: 52 GDVIVGGRNFGIGSSRESAALALKASGISGIIAESFGRIFYRNAVNLG--IPLLVGDTKP 109
Query: 188 RLCEECSTGDVVTI--EIAESRLINHTTGKEYKLKPI-GDLGPVIDAGGIFAYARKTG 242
GDV+T+ E E R N + +P+ G L ++ GGI Y R+ G
Sbjct: 110 -----LRDGDVITVNWETGEVRRGNEV----FHFRPLDGFLLEIVREGGILEYIRRRG 158
>gi|320334119|ref|YP_004170830.1| 3-isopropylmalate dehydratase small subunit [Deinococcus
maricopensis DSM 21211]
gi|319755408|gb|ADV67165.1| 3-isopropylmalate dehydratase small subunit [Deinococcus
maricopensis DSM 21211]
Length = 164
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 82/161 (50%), Gaps = 15/161 (9%)
Query: 80 NIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKIIIAGGN 139
+I+TD+IIPA +LT D +L +A+ + R II+AG +
Sbjct: 11 HINTDEIIPARHLT-----TDVESELAKFAMEDYDKDFVRRV-------KPGDIIVAGAD 58
Query: 140 FGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEECSTGDVV 199
FGCGSSREHA AL AG +AV+A ++ARIF+RN++ G L+++ + E GD
Sbjct: 59 FGCGSSREHAVWALRGAGVAAVIAPNFARIFYRNAINNG-FLALEADG-IVETFMDGDEA 116
Query: 200 TIEIAESRLINHTTGKEYKLKPIGDLG-PVIDAGGIFAYAR 239
+++ + N TG+ P+ V AGG Y +
Sbjct: 117 DLDLTGGTVTNKRTGQVVTFVPVPPFALDVQRAGGWLEYMK 157
>gi|383791510|ref|YP_005476084.1| 3-isopropylmalate dehydratase small subunit [Spirochaeta africana
DSM 8902]
gi|383108044|gb|AFG38377.1| 3-isopropylmalate dehydratase small subunit [Spirochaeta africana
DSM 8902]
Length = 211
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/112 (46%), Positives = 63/112 (56%), Gaps = 20/112 (17%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRF-IDE-------NET 127
VVGD+IDTD+IIPA YL + + +G Y Y RF ID NE
Sbjct: 17 VVGDDIDTDRIIPARYLKEIT-----FSSMGEYPF------YDERFEIDGALKKHPFNEP 65
Query: 128 KTK-YKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG 178
K + +I++A NFGCGSSREHAP +L G AVVAES+A IF N V G
Sbjct: 66 KHQGARILLANVNFGCGSSREHAPQSLHRWGIDAVVAESFAEIFAGNCVMLG 117
>gi|432331947|ref|YP_007250090.1| 3-isopropylmalate dehydratase, small subunit [Methanoregula
formicicum SMSP]
gi|432138656|gb|AGB03583.1| 3-isopropylmalate dehydratase, small subunit [Methanoregula
formicicum SMSP]
Length = 156
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 82/162 (50%), Gaps = 21/162 (12%)
Query: 80 NIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKIIIAGGN 139
+IDTD +I YL + S+ L + R K +I+AG N
Sbjct: 13 DIDTDVVIAGRYL-----RTKDKSIWASHVFEDLDPSLAHRL--------KGAVIVAGKN 59
Query: 140 FGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEECSTGDVV 199
FGCGSSRE A +A+ G AV+A S+ARIFFRN++ G PL EA + C G+++
Sbjct: 60 FGCGSSREQAAIAIREVGAVAVIAPSFARIFFRNAINVG--LPL-IEADI--PCDDGNMI 114
Query: 200 TIEIAESRLINHTTGKEYKLKPIG-DLGPVIDAGGIFAYARK 240
+A+ I +GK Y +K + + ++ AGG+ Y RK
Sbjct: 115 KFNLAQG--IVEVSGKRYSVKTLSPRMQEILVAGGLVEYWRK 154
>gi|336115038|ref|YP_004569805.1| 3-isopropylmalate dehydratase small subunit [Bacillus coagulans
2-6]
gi|335368468|gb|AEH54419.1| 3-isopropylmalate dehydratase, small subunit [Bacillus coagulans
2-6]
Length = 196
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/126 (42%), Positives = 66/126 (52%), Gaps = 24/126 (19%)
Query: 65 EPTATFHGLCYVVG-DNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFID 123
EP TF GL + + N+DTDQIIP ++L + E+ G G Y RF D
Sbjct: 2 EPFQTFSGLVFPLDRKNVDTDQIIPKQFLKRI-------ERKG----FGECLFYNWRF-D 49
Query: 124 ENETKT--------KY---KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFR 172
EN K KY +I++AG NFGCGSSREHAP AL G V+A S+A IF
Sbjct: 50 ENGNKREDFPLNDPKYEGAQILVAGDNFGCGSSREHAPWALQDYGFKVVIATSFADIFHN 109
Query: 173 NSVATG 178
N + G
Sbjct: 110 NCLKNG 115
>gi|306819918|ref|ZP_07453570.1| 3-isopropylmalate dehydratase small subunit [Eubacterium yurii
subsp. margaretiae ATCC 43715]
gi|304552031|gb|EFM39970.1| 3-isopropylmalate dehydratase small subunit [Eubacterium yurii
subsp. margaretiae ATCC 43715]
Length = 197
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 73/157 (46%), Gaps = 19/157 (12%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSN--------PDEYEKLGSYALIGLPATYTTRFIDENET 127
++ DNIDTD +IP YL V P Y+K G+ F+ E
Sbjct: 21 ILNDNIDTDILIPKNYLKSVKRTGFGDFVFAPWRYDKDGNK---------IADFVLNQEK 71
Query: 128 KTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEI-YPLDSE 186
I+I G NFGCGSSREHA AL G V+A Y+ IF+ N ++ G + LD E
Sbjct: 72 YADASILITGENFGCGSSREHAAWALQDYGIRVVIAGGYSDIFYNNWLSNGNVAIKLDFE 131
Query: 187 AR-LCEECSTGDVVTIEIAESRLINHTTGKEYKLKPI 222
R + E S G V I++ ++I ++ PI
Sbjct: 132 KRKMLSELSDGKEVKIDLINQKIIFKDLSIDFDFPPI 168
>gi|15920820|ref|NP_376489.1| 3-isopropylmalate dehydratase small subunit [Sulfolobus tokodaii
str. 7]
gi|23396667|sp|Q974Q9.1|LEUD_SULTO RecName: Full=3-isopropylmalate dehydratase small subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|342306259|dbj|BAK54348.1| homoaconitase/3-isopropylmalate dehydratase small subunit
[Sulfolobus tokodaii str. 7]
Length = 168
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 88/165 (53%), Gaps = 16/165 (9%)
Query: 78 GDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKIIIAG 137
GD IDTD IIPA YL ++P + L +A+ L + + + I++AG
Sbjct: 11 GDKIDTDIIIPARYLKY--TDP---QYLAQHAMEPLDPEFYKK-------ASAGVILVAG 58
Query: 138 GNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEECSTGD 197
FG GSSRE A +AL AAG A++AES+ARIF+RN++ G P + + + GD
Sbjct: 59 KVFGMGSSREQAAIALKAAGVRAIIAESFARIFYRNAINNG--LPAIVLPGVTQLINEGD 116
Query: 198 VVTIEIAESRLINHTTGKEYKLKPI-GDLGPVIDAGGIFAYARKT 241
V I + +I + K YK + I G ++++GG+ Y +K
Sbjct: 117 YVKINVETGEIIVNNQ-KVYKGRGITGMPLKILESGGLLDYLKKV 160
>gi|319947121|ref|ZP_08021355.1| 3-isopropylmalate dehydratase small subunit [Streptococcus
australis ATCC 700641]
gi|417920257|ref|ZP_12563769.1| 3-isopropylmalate dehydratase, small subunit [Streptococcus
australis ATCC 700641]
gi|319747169|gb|EFV99428.1| 3-isopropylmalate dehydratase small subunit [Streptococcus
australis ATCC 700641]
gi|342829908|gb|EGU64249.1| 3-isopropylmalate dehydratase, small subunit [Streptococcus
australis ATCC 700641]
Length = 196
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 79/161 (49%), Gaps = 18/161 (11%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTT--RFIDENETKTKYKI 133
++ DNIDTDQI+P ++L L+ + K YA L YT FI +K I
Sbjct: 14 LMNDNIDTDQILPKQFLKLIDKKG--FGKYLMYAWRYLDDQYTEDPEFIFNKPEYSKATI 71
Query: 134 IIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGE---IYPLDSEARLC 190
+I G NFG GSSREHA AL G V+A S+ I + N + G + PL+ +L
Sbjct: 72 LITGDNFGAGSSREHAAWALADYGFKVVIAGSFGDIHYNNELNNGMLPIVQPLEVRQKLA 131
Query: 191 EECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLGPVIDA 231
T D VT+++ E ++I+ P+G+ ID
Sbjct: 132 SLKPT-DEVTVDLEEQKIIS----------PVGEFSFEIDG 161
>gi|416015841|ref|ZP_11563307.1| isopropylmalate isomerase small subunit [Pseudomonas syringae pv.
glycinea str. B076]
gi|416026422|ref|ZP_11569871.1| isopropylmalate isomerase small subunit [Pseudomonas syringae pv.
glycinea str. race 4]
gi|422405791|ref|ZP_16482830.1| isopropylmalate isomerase small subunit [Pseudomonas syringae pv.
glycinea str. race 4]
gi|320324871|gb|EFW80943.1| isopropylmalate isomerase small subunit [Pseudomonas syringae pv.
glycinea str. B076]
gi|320329236|gb|EFW85233.1| isopropylmalate isomerase small subunit [Pseudomonas syringae pv.
glycinea str. race 4]
gi|330880868|gb|EGH15017.1| isopropylmalate isomerase small subunit [Pseudomonas syringae pv.
glycinea str. race 4]
Length = 213
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 81/153 (52%), Gaps = 22/153 (14%)
Query: 80 NIDTDQIIPAEYLTLV------PSNPDEYEKLGSYALIGLPATYTTR------FIDENET 127
N+DTDQIIP ++L + P+ DE+ Y +G P ++ F+ +E
Sbjct: 18 NVDTDQIIPKQFLKSIKRTGFGPNLFDEWR----YLDVGQPYQDNSKRPLNHHFVLNHER 73
Query: 128 KTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEA 187
+++A NFGCGSSREHAP AL G A++A SYA IFF NS G + + SEA
Sbjct: 74 YQGASVLLARENFGCGSSREHAPWALEEYGFCAIIAPSYADIFFNNSFKNGLLPIILSEA 133
Query: 188 RLCE-----ECSTGDVVTIEIAESRLINHTTGK 215
+ E E S G ++I++ +++ + GK
Sbjct: 134 EVDELFKQVEASPGYQLSIDL-QAQTVTRPDGK 165
>gi|71736428|ref|YP_274177.1| isopropylmalate isomerase small subunit [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|289628111|ref|ZP_06461065.1| isopropylmalate isomerase small subunit [Pseudomonas syringae pv.
aesculi str. NCPPB 3681]
gi|289646659|ref|ZP_06478002.1| isopropylmalate isomerase small subunit [Pseudomonas syringae pv.
aesculi str. 2250]
gi|422582578|ref|ZP_16657712.1| isopropylmalate isomerase small subunit [Pseudomonas syringae pv.
aesculi str. 0893_23]
gi|422597123|ref|ZP_16671399.1| isopropylmalate isomerase small subunit [Pseudomonas syringae pv.
lachrymans str. M301315]
gi|85540693|sp|Q48K98.1|LEUD_PSE14 RecName: Full=3-isopropylmalate dehydratase small subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|71556981|gb|AAZ36192.1| 3-isopropylmalate dehydratase, small subunit [Pseudomonas syringae
pv. phaseolicola 1448A]
gi|330867419|gb|EGH02128.1| isopropylmalate isomerase small subunit [Pseudomonas syringae pv.
aesculi str. 0893_23]
gi|330987416|gb|EGH85519.1| isopropylmalate isomerase small subunit [Pseudomonas syringae pv.
lachrymans str. M301315]
Length = 213
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 81/153 (52%), Gaps = 22/153 (14%)
Query: 80 NIDTDQIIPAEYLTLV------PSNPDEYEKLGSYALIGLPATYTTR------FIDENET 127
N+DTDQIIP ++L + P+ DE+ Y +G P ++ F+ +E
Sbjct: 18 NVDTDQIIPKQFLKSIKRTGFGPNLFDEWR----YLDVGQPYQDNSKRPLNHDFVLNHER 73
Query: 128 KTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEA 187
+++A NFGCGSSREHAP AL G A++A SYA IFF NS G + + SEA
Sbjct: 74 YQGASVLLARENFGCGSSREHAPWALEEYGFCAIIAPSYADIFFNNSFKNGLLPIILSEA 133
Query: 188 RLCE-----ECSTGDVVTIEIAESRLINHTTGK 215
+ E E S G ++I++ +++ + GK
Sbjct: 134 EVDELFKQVEASPGYQLSIDL-QAQTVTRPDGK 165
>gi|269792974|ref|YP_003317878.1| 3-isopropylmalate dehydratase small subunit [Thermanaerovibrio
acidaminovorans DSM 6589]
gi|269100609|gb|ACZ19596.1| 3-isopropylmalate dehydratase, small subunit [Thermanaerovibrio
acidaminovorans DSM 6589]
Length = 172
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 90/180 (50%), Gaps = 22/180 (12%)
Query: 68 ATFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENET 127
A G +V GD++DTD I +YL ++P +K+ Y+ P EN
Sbjct: 4 AVLRGRAWVFGDDVDTDLIYHNKYLA--ETDP---KKMAQYSFEYYPGK-------ENFA 51
Query: 128 KTKY--KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPL-- 183
K ++AG NFG GSSREHA L G V+AES+ARI++RN++ G YP+
Sbjct: 52 KEVKPGDFVVAGRNFGTGSSREHAVYCLKEIGVPMVLAESFARIYYRNAINNG--YPVLF 109
Query: 184 ---DSEARLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLG-PVIDAGGIFAYAR 239
SEA + GD + + + + N T G E++ + DL +++AGG+ Y +
Sbjct: 110 VKGLSEAIKEGKVRDGDQLEVNASTGVIRNLTQGVEFQGDAVTDLEMEIMEAGGLIEYLK 169
>gi|410091241|ref|ZP_11287813.1| isopropylmalate isomerase small subunit [Pseudomonas viridiflava
UASWS0038]
gi|409761404|gb|EKN46474.1| isopropylmalate isomerase small subunit [Pseudomonas viridiflava
UASWS0038]
Length = 213
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 81/153 (52%), Gaps = 22/153 (14%)
Query: 80 NIDTDQIIPAEYLTLV------PSNPDEYEKLGSYALIGLPATYTTR------FIDENET 127
N+DTDQIIP ++L + P+ DE+ Y +G P ++ F+ +E
Sbjct: 18 NVDTDQIIPKQFLKSIKRTGFGPNLFDEWR----YLDVGQPYQDNSKRPLNHEFVLNHER 73
Query: 128 KTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEA 187
+++A NFGCGSSREHAP AL G A++A SYA IFF NS G + + +EA
Sbjct: 74 YQGASVLLARENFGCGSSREHAPWALEEYGFCAIIAPSYADIFFNNSFKNGLLPIILTEA 133
Query: 188 RLCE-----ECSTGDVVTIEIAESRLINHTTGK 215
+ E E S G +TI++ +++ + GK
Sbjct: 134 EVDELFKQVEASPGYQLTIDL-QAQTVTRPDGK 165
>gi|237801123|ref|ZP_04589584.1| isopropylmalate isomerase small subunit [Pseudomonas syringae pv.
oryzae str. 1_6]
gi|331023980|gb|EGI04037.1| isopropylmalate isomerase small subunit [Pseudomonas syringae pv.
oryzae str. 1_6]
Length = 213
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 81/153 (52%), Gaps = 22/153 (14%)
Query: 80 NIDTDQIIPAEYLTLV------PSNPDEYEKLGSYALIGLPATYTTR------FIDENET 127
N+DTDQIIP ++L + P+ DE+ Y +G P ++ F+ +E
Sbjct: 18 NVDTDQIIPKQFLKSIKRTGFGPNLFDEWR----YLDVGQPYQDNSKRPLNHDFVLNHER 73
Query: 128 KTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEA 187
+++A NFGCGSSREHAP AL G A++A SYA IFF NS G + + SEA
Sbjct: 74 YQGASVLLARENFGCGSSREHAPWALEEYGFCAIIAPSYADIFFNNSFKNGLLPIILSEA 133
Query: 188 RLCE-----ECSTGDVVTIEIAESRLINHTTGK 215
+ E E S G ++I++ +++ + GK
Sbjct: 134 DVDELFKQVEASLGYQLSIDL-QAQTVTRPDGK 165
>gi|163845926|ref|YP_001633970.1| 3-isopropylmalate dehydratase small subunit [Chloroflexus
aurantiacus J-10-fl]
gi|222523649|ref|YP_002568119.1| 3-isopropylmalate dehydratase small subunit [Chloroflexus sp.
Y-400-fl]
gi|163667215|gb|ABY33581.1| 3-isopropylmalate dehydratase, small subunit [Chloroflexus
aurantiacus J-10-fl]
gi|222447528|gb|ACM51794.1| 3-isopropylmalate dehydratase, small subunit [Chloroflexus sp.
Y-400-fl]
Length = 166
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 83/170 (48%), Gaps = 15/170 (8%)
Query: 74 CYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKI 133
++ G +I+TDQI+P Y + + E + + D I
Sbjct: 4 VWLFGPDINTDQIVPGRYAPYMLKDESELRRY----------PFIEHRPDFAANVRPGDI 53
Query: 134 IIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEEC 193
I+AG NFGCGSSRE+AP+AL G A++A +ARIFFRN++ G P + A L E
Sbjct: 54 IVAGKNFGCGSSREYAPLALRMVGIGAIIAPLFARIFFRNALNLG--IPCFT-ADLTGEL 110
Query: 194 STGDVVTIEIAESRLINHTTGKEYKLKPIG-DLGPVIDAGGIFAYARKTG 242
+ GD V +++ + R I G+ L P L V AGGI + R G
Sbjct: 111 ADGDEVELDLEQGR-ITTADGRVIHLPPPPLFLREVWAAGGIVPFYRTYG 159
>gi|307709497|ref|ZP_07645954.1| 3-isopropylmalate dehydratase small subunit [Streptococcus mitis
SK564]
gi|307619811|gb|EFN98930.1| 3-isopropylmalate dehydratase small subunit [Streptococcus mitis
SK564]
Length = 197
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 76/148 (51%), Gaps = 26/148 (17%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT------ 129
++ DNIDTDQI+P ++L L+ + G Y + Y R++D+N T+
Sbjct: 14 LMNDNIDTDQILPKQFLKLIDK-----KGFGKYLM------YAWRYLDDNYTEDPDFVFN 62
Query: 130 -----KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGE---IY 181
K I+I+G NFG GSSREHA AL G V+A S+ I + N + G +
Sbjct: 63 RPEYRKASILISGDNFGAGSSREHAAWALADYGFKVVIAGSFGDIHYNNELNNGMLPIVQ 122
Query: 182 PLDSEARLCEECSTGDVVTIEIAESRLI 209
P + +L + T D VT+++ + ++I
Sbjct: 123 PREVREKLAQLQPT-DQVTVDLEQQKII 149
>gi|427737860|ref|YP_007057404.1| 3-isopropylmalate dehydratase small subunit [Rivularia sp. PCC
7116]
gi|427372901|gb|AFY56857.1| 3-isopropylmalate dehydratase, small subunit [Rivularia sp. PCC
7116]
Length = 198
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/143 (37%), Positives = 74/143 (51%), Gaps = 31/143 (21%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYAL----IGLPATYTTRFIDENETKTKY 131
++G++IDTD+IIPA +L V ++ LG +A GL + +T+Y
Sbjct: 14 LIGNDIDTDRIIPARFLRCVT-----FDGLGEHAFEDDRKGLDGKHPF-------DQTQY 61
Query: 132 K---IIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEAR 188
K I+I NFGCGSSREHAP AL G A+V ES+A IFF N VA G P
Sbjct: 62 KNASILIVNRNFGCGSSREHAPQALAKWGIKALVGESFAEIFFGNCVAMG--VP------ 113
Query: 189 LCEECSTGDVVTIEIAESRLINH 211
C T D T++ + L ++
Sbjct: 114 ----CVTADADTVQQLQKMLTDN 132
>gi|337281919|ref|YP_004621390.1| 3-isopropylmalate dehydratase small subunit [Streptococcus
parasanguinis ATCC 15912]
gi|335369512|gb|AEH55462.1| 3-isopropylmalate dehydratase small subunit [Streptococcus
parasanguinis ATCC 15912]
Length = 196
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 77/148 (52%), Gaps = 26/148 (17%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENET-------- 127
++ DNIDTDQI+P ++L L+ + G Y + Y R++D+ T
Sbjct: 14 LMNDNIDTDQILPKQFLKLIDK-----KGFGKYLM------YAWRYLDDQYTEDPDFIFN 62
Query: 128 KTKYK---IIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGE---IY 181
K +Y+ I+I G NFG GSSREHA AL G + V+A S+ I + N + G +
Sbjct: 63 KAEYRKATILITGDNFGSGSSREHAAWALADYGFTVVIAGSFGDIHYNNELNNGMLPIVQ 122
Query: 182 PLDSEARLCEECSTGDVVTIEIAESRLI 209
PL+ +L T D VT+++ E ++I
Sbjct: 123 PLEVRQKLASLKPT-DPVTVDLEEQKII 149
>gi|257485504|ref|ZP_05639545.1| isopropylmalate isomerase small subunit [Pseudomonas syringae pv.
tabaci str. ATCC 11528]
gi|422604471|ref|ZP_16676487.1| isopropylmalate isomerase small subunit [Pseudomonas syringae pv.
mori str. 301020]
gi|330888129|gb|EGH20790.1| isopropylmalate isomerase small subunit [Pseudomonas syringae pv.
mori str. 301020]
Length = 213
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 81/153 (52%), Gaps = 22/153 (14%)
Query: 80 NIDTDQIIPAEYLTLV------PSNPDEYEKLGSYALIGLPATYTTR------FIDENET 127
N+DTDQIIP ++L + P+ DE+ Y +G P ++ F+ +E
Sbjct: 18 NVDTDQIIPKQFLKSIKRTGFGPNLFDEWR----YLDVGQPYQDNSKRPLNHDFVLNHER 73
Query: 128 KTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEA 187
+++A NFGCGSSREHAP AL G A++A SYA IFF NS G + + SEA
Sbjct: 74 YQGASVLLARENFGCGSSREHAPWALEEYGFCAIIAPSYADIFFNNSFKNGLLPIILSEA 133
Query: 188 RLCE-----ECSTGDVVTIEIAESRLINHTTGK 215
+ E E S G ++I++ +++ + GK
Sbjct: 134 EVDELFKQVEASPGYQLSIDL-QAQTVTRPDGK 165
>gi|421730770|ref|ZP_16169896.1| isopropylmalate isomerase small subunit [Bacillus amyloliquefaciens
subsp. plantarum M27]
gi|407074924|gb|EKE47911.1| isopropylmalate isomerase small subunit [Bacillus amyloliquefaciens
subsp. plantarum M27]
Length = 199
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 75/150 (50%), Gaps = 24/150 (16%)
Query: 80 NIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYK------- 132
N+DTDQIIP ++L + E+ G G A + R+++ E +++
Sbjct: 18 NVDTDQIIPKQFLKRI-------ERTG----YGRFAFFDWRYLENGEPDPEFELNRKVYE 66
Query: 133 ---IIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEI---YPLDSE 186
I+IAG NFGCGSSREHAP AL G ++A S+A IF +N G + P D
Sbjct: 67 GASILIAGENFGCGSSREHAPWALDDYGFKIIIAPSFADIFHQNCFKNGMLPIRMPYDQW 126
Query: 187 ARLCEECSTGDVVTIEIAESRLINHTTGKE 216
+L + + E++LI+ + GKE
Sbjct: 127 KKLAGQYENQSLNMTVDLENQLIHDSEGKE 156
>gi|419801120|ref|ZP_14326364.1| 3-isopropylmalate dehydratase, small subunit [Streptococcus
parasanguinis F0449]
gi|385692737|gb|EIG23408.1| 3-isopropylmalate dehydratase, small subunit [Streptococcus
parasanguinis F0449]
Length = 196
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 76/148 (51%), Gaps = 26/148 (17%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENET-------- 127
++ DNIDTDQI+P ++L L+ + G Y + Y R++D+ T
Sbjct: 14 LMNDNIDTDQILPKQFLKLIDK-----KGFGKYLM------YAWRYLDDQYTEDPDFIFN 62
Query: 128 KTKYK---IIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGE---IY 181
K +Y+ I+I G NFG GSSREHA AL G V+A S+ I + N + G +
Sbjct: 63 KVEYRKATILITGDNFGAGSSREHAAWALADYGFKVVIAGSFGDIHYNNELNNGMLPIVQ 122
Query: 182 PLDSEARLCEECSTGDVVTIEIAESRLI 209
PL+ +L T D VT+++ E ++I
Sbjct: 123 PLEVRQQLASLKPT-DPVTVDLEEQKII 149
>gi|374579063|ref|ZP_09652157.1| 3-isopropylmalate dehydratase, small subunit [Desulfosporosinus
youngiae DSM 17734]
gi|374415145|gb|EHQ87580.1| 3-isopropylmalate dehydratase, small subunit [Desulfosporosinus
youngiae DSM 17734]
Length = 174
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 89/168 (52%), Gaps = 15/168 (8%)
Query: 80 NIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKIIIAGGN 139
+I+TD+IIPA+YLT + E L Y L L T F ++++ K K +++ N
Sbjct: 15 DINTDEIIPAKYLTEITK-----EALKPYLLEDLS---LTGFNNKDDIKDK-AVLVTRAN 65
Query: 140 FGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEI---YPLDSEARLCEECSTG 196
FGCGSSREHAP AL G + V+AES+ARIF +N G P + L E +
Sbjct: 66 FGCGSSREHAPWALEVNGINVVIAESFARIFRQNMYNCGMFAIELPTEKIDYLFENYAGK 125
Query: 197 DV-VTIEIAESRLINHTTGKEYKLK-PIGDLGP-VIDAGGIFAYARKT 241
D +TI+I ++I +T + ++ +G+ ++ GG YA K
Sbjct: 126 DTSLTIDIENDKIIVVSTDQSEEIDFNVGEFDKTLVKEGGWVGYADKN 173
>gi|260892980|ref|YP_003239077.1| 3-isopropylmalate dehydratase small subunit [Ammonifex degensii
KC4]
gi|260865121|gb|ACX52227.1| 3-isopropylmalate dehydratase, small subunit [Ammonifex degensii
KC4]
Length = 166
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 90/173 (52%), Gaps = 18/173 (10%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + GD+I+TD II +Y + E+L + + L + +
Sbjct: 3 GRAHKFGDDINTDYIISGKY----KFKTLDMEELARHVMEDLDPEFYHKI-------RPG 51
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG-EIYPLDSEARLC 190
I+AG NFGCGSSRE AP+ + A AV+A+S+ARIFFRN++ TG + D+
Sbjct: 52 DFIVAGWNFGCGSSREQAPLVIKHARIGAVLAKSFARIFFRNAINTGLPVVECDT----- 106
Query: 191 EECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARKTG 242
++ GD + +++A + N T G +KP+ + +++ GG+ A+ +K G
Sbjct: 107 DQIEAGDELEVDLARGVVENLTKGISIPIKPLPPVMLKILEDGGLIAHFQKYG 159
>gi|298493082|ref|YP_003723259.1| 3-isopropylmalate dehydratase small subunit ['Nostoc azollae' 0708]
gi|298235000|gb|ADI66136.1| 3-isopropylmalate dehydratase, small subunit ['Nostoc azollae'
0708]
Length = 201
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 60/104 (57%), Gaps = 7/104 (6%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIG-LPATYTTRFIDENETKTKYKII 134
++G++IDTD+IIPA YL V ++ LG I A D+ E + K++
Sbjct: 15 LIGNDIDTDRIIPARYLKAV-----TFDGLGEGVFIDDRKALNGEHPFDQTEYQGA-KVL 68
Query: 135 IAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG 178
I NFGCGSSREHAP AL G AV+ ES+A IFF N VA G
Sbjct: 69 IVNRNFGCGSSREHAPQALAKWGIKAVIGESFAEIFFGNCVAMG 112
>gi|443326056|ref|ZP_21054723.1| 3-isopropylmalate dehydratase, small subunit [Xenococcus sp. PCC
7305]
gi|442794329|gb|ELS03749.1| 3-isopropylmalate dehydratase, small subunit [Xenococcus sp. PCC
7305]
Length = 195
Score = 79.7 bits (195), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 58/103 (56%), Gaps = 5/103 (4%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKIII 135
V+G++IDTD+IIPA +L V ++ LG A A + + I++
Sbjct: 14 VIGNDIDTDRIIPARFLRCV-----TFDGLGEQAFADDRAQAAEQHPFDLPQYQGANILV 68
Query: 136 AGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG 178
GNFGCGSSREHAP +L G A+V ES+A IFF N +A G
Sbjct: 69 VNGNFGCGSSREHAPQSLARWGIKAIVGESFAEIFFGNCIAIG 111
>gi|331266245|ref|YP_004325875.1| 3-isopropylmalate dehydratase small subunit [Streptococcus oralis
Uo5]
gi|414158595|ref|ZP_11414889.1| 3-isopropylmalate dehydratase small subunit [Streptococcus sp.
F0441]
gi|326682917|emb|CBZ00534.1| 3-isopropylmalate dehydratase small subunit [Streptococcus oralis
Uo5]
gi|410871140|gb|EKS19097.1| 3-isopropylmalate dehydratase small subunit [Streptococcus sp.
F0441]
Length = 197
Score = 79.7 bits (195), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 84/170 (49%), Gaps = 36/170 (21%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT------ 129
++ DNIDTDQI+P ++L L+ + G Y + Y R++D+N T+
Sbjct: 14 LMNDNIDTDQILPKQFLKLIDK-----KGFGKYLM------YAWRYLDDNYTEDPDFVFN 62
Query: 130 -----KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGE---IY 181
K I+I+G NFG GSSREHA AL G V+A S+ I + N + G +
Sbjct: 63 RPEYRKASILISGDNFGAGSSREHAAWALADYGFKVVIAGSFGDIHYNNELNNGMLPIVQ 122
Query: 182 PLDSEARLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLGPVIDA 231
P + +L + T D VT+++ + ++I+ P+G+ ID+
Sbjct: 123 PREVREKLAQLKPT-DQVTVDLEQQKIIS----------PVGEFTFEIDS 161
>gi|253581258|ref|ZP_04858514.1| homoaconitase [Ruminococcus sp. 5_1_39B_FAA]
gi|251847459|gb|EES75433.1| homoaconitase [Ruminococcus sp. 5_1_39BFAA]
Length = 163
Score = 79.7 bits (195), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 47/113 (41%), Positives = 66/113 (58%), Gaps = 6/113 (5%)
Query: 129 TKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEAR 188
K II+AG NFGCGSSRE AP + A G V+A+S+ARIFFRNS+ G + L +
Sbjct: 51 QKGDIIVAGKNFGCGSSREQAPEIIKALGIQCVIAKSFARIFFRNSINNGLL--LIEQPD 108
Query: 189 LCEECSTGDVVTIEIAESRLINHTTGKEYKLKPI-GDLGPVIDAGGIFAYARK 240
L ++ GD +T+ + E N GK+Y + + +L +I AGG+ RK
Sbjct: 109 LHDDIKEGDEITVVMNEHVDYN---GKQYPIASLPENLMSIIQAGGLVKAMRK 158
>gi|309800547|ref|ZP_07694696.1| 3-isopropylmalate dehydratase, small subunit [Streptococcus
infantis SK1302]
gi|308115825|gb|EFO53352.1| 3-isopropylmalate dehydratase, small subunit [Streptococcus
infantis SK1302]
Length = 167
Score = 79.7 bits (195), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 75/146 (51%), Gaps = 26/146 (17%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT------ 129
++ DNIDTDQI+P ++L L+ + + G Y + Y R++D+N T+
Sbjct: 14 LMNDNIDTDQILPKQFLKLI-----DKKGFGKYLM------YAWRYLDDNYTEDPDFVFN 62
Query: 130 -----KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGE---IY 181
K I+I+G NFG GSSREHA AL G V+A S+ I + N + G +
Sbjct: 63 RPEYRKASILISGDNFGAGSSREHAAWALADYGFKVVIAGSFGDIHYNNELNNGMLPIVQ 122
Query: 182 PLDSEARLCEECSTGDVVTIEIAESR 207
P D +L + T D VT+++ + +
Sbjct: 123 PRDVREKLAQLKPT-DQVTVDLEKQK 147
>gi|295108504|emb|CBL22457.1| 3-isopropylmalate dehydratase, small subunit [Ruminococcus obeum
A2-162]
Length = 160
Score = 79.7 bits (195), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 89/170 (52%), Gaps = 17/170 (10%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + +++DTDQII ++YL L+P N DE + +A L ++ +
Sbjct: 4 GTIFKFHNDLDTDQIIASQYL-LLP-NLDE---MKGHAFESLDPDFSKKV-------KPG 51
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
++ G NFGCGSSRE AP L A G AV+A+S+ARIFFRN++ G P L +
Sbjct: 52 DFVVGGENFGCGSSREQAPGVLKALGVQAVIAKSFARIFFRNAINIG--LPAIVCKDLPD 109
Query: 192 ECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
+TGD + + +++ + GK Y + + + +++ GG+ A K
Sbjct: 110 NVATGDTMELHMSDGTAV--ANGKTYTCTKLPEYMQGILNQGGLIASLNK 157
>gi|419780188|ref|ZP_14306038.1| 3-isopropylmalate dehydratase, small subunit [Streptococcus oralis
SK100]
gi|383185347|gb|EIC77843.1| 3-isopropylmalate dehydratase, small subunit [Streptococcus oralis
SK100]
Length = 197
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 85/173 (49%), Gaps = 32/173 (18%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT------ 129
++ DNIDTDQI+P ++L L+ + G Y + Y R++D+N T+
Sbjct: 14 LMNDNIDTDQILPKQFLKLIDK-----KGFGKYLM------YAWRYLDDNYTEDPDFVFN 62
Query: 130 -----KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGE---IY 181
K I+I+G NFG GSSREHA AL G V+A S+ I + N + G +
Sbjct: 63 RPEYRKASILISGDNFGAGSSREHAAWALADYGFKVVIAGSFGDIHYNNELNNGMLPIVQ 122
Query: 182 PLDSEARLCEECSTGDVVTIEIAESRLIN------HTTGKEYKLKPIGDLGPV 228
P + +L + T D VT+++ + ++I+ +E+K K + L +
Sbjct: 123 PREVREKLAQLKPT-DQVTVDLEQQKIISPVGEFTFEIDREWKHKLLNGLDDI 174
>gi|322375355|ref|ZP_08049868.1| 3-isopropylmalate dehydratase, small subunit [Streptococcus sp.
C300]
gi|418975732|ref|ZP_13523630.1| 3-isopropylmalate dehydratase, small subunit [Streptococcus oralis
SK1074]
gi|419779461|ref|ZP_14305337.1| 3-isopropylmalate dehydratase, small subunit [Streptococcus oralis
SK10]
gi|419782309|ref|ZP_14308118.1| 3-isopropylmalate dehydratase, small subunit [Streptococcus oralis
SK610]
gi|321279618|gb|EFX56658.1| 3-isopropylmalate dehydratase, small subunit [Streptococcus sp.
C300]
gi|383183413|gb|EIC75950.1| 3-isopropylmalate dehydratase, small subunit [Streptococcus oralis
SK610]
gi|383186489|gb|EIC78959.1| 3-isopropylmalate dehydratase, small subunit [Streptococcus oralis
SK10]
gi|383347178|gb|EID25179.1| 3-isopropylmalate dehydratase, small subunit [Streptococcus oralis
SK1074]
Length = 197
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 76/148 (51%), Gaps = 26/148 (17%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT------ 129
++ DNIDTDQI+P ++L L+ + G Y + Y R++D+N T+
Sbjct: 14 LMNDNIDTDQILPKQFLKLIDK-----KGFGKYLM------YAWRYLDDNYTEDPDFVFN 62
Query: 130 -----KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGE---IY 181
K I+I+G NFG GSSREHA AL G V+A S+ I + N + G +
Sbjct: 63 RPEYRKASILISGDNFGAGSSREHAAWALADYGFKVVIAGSFGDIHYNNELNNGMLPIVQ 122
Query: 182 PLDSEARLCEECSTGDVVTIEIAESRLI 209
P + +L + T D VT+++ + ++I
Sbjct: 123 PREVREKLAQLKPT-DQVTVDLEQQKII 149
>gi|406576571|ref|ZP_11052199.1| isopropylmalate isomerase small subunit [Streptococcus sp. GMD6S]
gi|404461319|gb|EKA07292.1| isopropylmalate isomerase small subunit [Streptococcus sp. GMD6S]
Length = 197
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 85/173 (49%), Gaps = 32/173 (18%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT------ 129
++ DNIDTDQI+P ++L L+ + G Y + Y R++D+N T+
Sbjct: 14 LMNDNIDTDQILPKQFLKLIDK-----KGFGKYLM------YAWRYLDDNYTEDPDFVFN 62
Query: 130 -----KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGE---IY 181
K I+I+G NFG GSSREHA AL G V+A S+ I + N + G +
Sbjct: 63 RPEYRKASILISGDNFGAGSSREHAAWALADYGFKVVIAGSFGDIHYNNELNNGMLPIVQ 122
Query: 182 PLDSEARLCEECSTGDVVTIEIAESRLIN------HTTGKEYKLKPIGDLGPV 228
P + +L + T D VT+++ + ++I+ +E+K K + L +
Sbjct: 123 PREVREKLAQLKPT-DQVTVDLEQQKIISPVGEFTFEIDREWKHKLLNGLDDI 174
>gi|448473327|ref|ZP_21601469.1| 3-isopropylmalate dehydratase, small subunit [Halorubrum aidingense
JCM 13560]
gi|445818839|gb|EMA68688.1| 3-isopropylmalate dehydratase, small subunit [Halorubrum aidingense
JCM 13560]
Length = 218
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 63/112 (56%), Gaps = 20/112 (17%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT------ 129
V G++IDTDQIIPA ++ +V ++ LG +A + RF D + K
Sbjct: 26 VRGNDIDTDQIIPARFMKVVT-----FDGLGQFAF------FDQRFDDADNEKDHPFNEE 74
Query: 130 KYK---IIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG 178
+Y+ +++ NFGCGSSREHAP AL G AVV ES+A IF N +A G
Sbjct: 75 RYQGANVLVVNANFGCGSSREHAPQALMRWGIDAVVGESFAEIFAGNCLALG 126
>gi|297564917|ref|YP_003683889.1| 3-isopropylmalate dehydratase small subunit [Meiothermus silvanus
DSM 9946]
gi|296849366|gb|ADH62381.1| 3-isopropylmalate dehydratase, small subunit [Meiothermus silvanus
DSM 9946]
Length = 166
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 86/170 (50%), Gaps = 16/170 (9%)
Query: 74 CYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKI 133
+ GD+I+TD I+P +Y + +K +YA A + F + + I
Sbjct: 4 IWKFGDSINTDDILPGKYAPFMVGE----DKFHTYAF----AHFRPEFAPDYKPGD---I 52
Query: 134 IIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEEC 193
++ G N G GSSRE+AP AL G A++A+SYARIF+RN V G I P +S + +
Sbjct: 53 LVCGKNTGLGSSREYAPEALKKLGLKAIIAKSYARIFYRNLVNLG-IMPFES-PEVVDAL 110
Query: 194 STGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARKTG 242
GD V +E + L T + ++LKP D L + G I Y +K G
Sbjct: 111 HDGDEVELEFEKGILKRGT--ETFQLKPPPDFLLEALKEGSILEYYKKHG 158
>gi|254525664|ref|ZP_05137716.1| 3-isopropylmalate dehydratase, small subunit [Prochlorococcus
marinus str. MIT 9202]
gi|221537088|gb|EEE39541.1| 3-isopropylmalate dehydratase, small subunit [Prochlorococcus
marinus str. MIT 9202]
Length = 205
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 61/112 (54%), Gaps = 6/112 (5%)
Query: 68 ATFHGLCY-VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENE 126
+ +G C ++G++IDTD+IIPA +L V ++ LG T + + E
Sbjct: 13 SNVNGQCISLIGNDIDTDRIIPARFLKCV-----NFDSLGESVFEDDRKTLKGKHPFDLE 67
Query: 127 TKTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG 178
I+I NFGCGSSREHAP AL G A++ ES+A IF+ N +A G
Sbjct: 68 DNNNASILIVNSNFGCGSSREHAPQALMRWGIKAIIGESFADIFYSNCIAIG 119
>gi|123965523|ref|YP_001010604.1| 3-isopropylmalate dehydratase small subunit [Prochlorococcus
marinus str. MIT 9515]
gi|123199889|gb|ABM71497.1| 3-isopropylmalate dehydratase small subunit [Prochlorococcus
marinus str. MIT 9515]
Length = 206
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 60/112 (53%), Gaps = 6/112 (5%)
Query: 68 ATFHGLCY-VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENE 126
+ +G C +VGD+IDTD+IIPA +L V ++ LG + + E
Sbjct: 13 SQLNGKCISLVGDDIDTDRIIPARFLKCV-----NFDSLGKSVFDDDRKALKGKHPFDLE 67
Query: 127 TKTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG 178
I+I NFGCGSSREHAP AL G A++ ES+A IF+ N +A G
Sbjct: 68 ANKGASILIVNSNFGCGSSREHAPQALMRWGIKAIIGESFADIFYSNCIAIG 119
>gi|148655210|ref|YP_001275415.1| homoaconitate hydratase small subunit [Roseiflexus sp. RS-1]
gi|148567320|gb|ABQ89465.1| homoaconitase small subunit [Roseiflexus sp. RS-1]
Length = 166
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 83/168 (49%), Gaps = 16/168 (9%)
Query: 74 CYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKI 133
+ G N++TDQI+P Y P E+L +Y I + + T +
Sbjct: 4 IWRFGANVNTDQIVPGRY---APYMLKSEEELRNYPFIEARPEFAS-------TVRPGDL 53
Query: 134 IIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEEC 193
IIAG NFGCGSSRE+AP+AL G A++A +ARIF+RN++ G PL EA L +
Sbjct: 54 IIAGPNFGCGSSREYAPLALKMVGIGAIIAPLFARIFYRNALNLG--IPL-FEADLTGQL 110
Query: 194 STGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
G V + +I G+ +L P + + V GGI + RK
Sbjct: 111 EDGQEVEFNVETGVII--ADGRTIQLPPPPEWMREVWREGGIVPFYRK 156
>gi|119510822|ref|ZP_01629947.1| 3-isopropylmalate dehydratase, LeuC subunit [Nodularia spumigena
CCY9414]
gi|119464501|gb|EAW45413.1| 3-isopropylmalate dehydratase, LeuC subunit [Nodularia spumigena
CCY9414]
Length = 574
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/102 (45%), Positives = 59/102 (57%), Gaps = 14/102 (13%)
Query: 77 VGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKIIIA 136
+GD+I+TD IIPA T +PD ++ LIG+ KY +I+A
Sbjct: 15 LGDDINTDDIIPANRATTY--DPDILKQYALEHLIGVGELL------------KYNVIVA 60
Query: 137 GGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG 178
G NFGCGSSRE APVAL AAG + A S+A IF+RNS+ G
Sbjct: 61 GENFGCGSSREIAPVALKAAGIEKIQARSFAEIFYRNSINIG 102
>gi|448739443|ref|ZP_21721458.1| 3-isopropylmalate dehydratase small subunit [Halococcus
thailandensis JCM 13552]
gi|445800038|gb|EMA50407.1| 3-isopropylmalate dehydratase small subunit [Halococcus
thailandensis JCM 13552]
Length = 203
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 77/145 (53%), Gaps = 25/145 (17%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT------ 129
V G++IDTDQ+IPA ++ ++ ++ LG +A + RF DE+ K
Sbjct: 19 VRGNDIDTDQVIPARFMKVIT-----FDGLGEFAF------FDQRFDDEDNEKDHPMNEE 67
Query: 130 KYK---IIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG-----EIY 181
+++ +++ NFGCGSSREHAP AL G A++ ES+A IF N +A G +
Sbjct: 68 RFRDASVMVVNANFGCGSSREHAPQALMRWGIDALIGESFAEIFAGNCLALGIPTVTADH 127
Query: 182 PLDSEARLCEECSTGDVVTIEIAES 206
SE + E + D + I++A+
Sbjct: 128 ETVSEIQAWTESNPDDDIEIDVADE 152
>gi|414077353|ref|YP_006996671.1| 3-isopropylmalate dehydratase small subunit [Anabaena sp. 90]
gi|413970769|gb|AFW94858.1| 3-isopropylmalate dehydratase small subunit [Anabaena sp. 90]
Length = 202
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 58/103 (56%), Gaps = 5/103 (4%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKIII 135
++G++IDTD+IIPA YL + ++ LG+ + + KI+I
Sbjct: 15 LIGNDIDTDRIIPARYLKAIT-----FDDLGAGVFVDDRKALNGEHPFDQIHYQGAKILI 69
Query: 136 AGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG 178
A NFGCGSSREHAP AL G A++ ES+A IFF N VA G
Sbjct: 70 ANRNFGCGSSREHAPQALAKWGIKALIGESFAEIFFGNCVAMG 112
>gi|170289818|ref|YP_001736634.1| 3-isopropylmalate dehydratase small subunit [Candidatus Korarchaeum
cryptofilum OPF8]
gi|170173898|gb|ACB06951.1| 3-isopropylmalate dehydratase, small subunit [Candidatus
Korarchaeum cryptofilum OPF8]
Length = 165
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 90/170 (52%), Gaps = 17/170 (10%)
Query: 79 DNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKIIIAGG 138
DN+DTD IIPA YL S+P E L +A+ L + ++ + +II+AG
Sbjct: 11 DNVDTDVIIPARYLKH-GSDP---EILRGHAMEDLDPLF-------HQKVRERRIIVAGR 59
Query: 139 NFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEECSTGDV 198
NFGCGSSRE A +AL +G ++A+S+ARIFFRNS+ G EA + E+ +
Sbjct: 60 NFGCGSSREQAVLALKYSGIELIIAQSFARIFFRNSINLGLPVMEVPEASIIED---NEY 116
Query: 199 VTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARKTGMIASR 247
+ ++ + R+ G E I + + ++ AGGI Y R GM R
Sbjct: 117 LEADLEKGRVYLPERGIELIGTKIPEFMMSILRAGGIVPYLR--GMRGCR 164
>gi|312867727|ref|ZP_07727933.1| 3-isopropylmalate dehydratase, small subunit [Streptococcus
parasanguinis F0405]
gi|311096790|gb|EFQ55028.1| 3-isopropylmalate dehydratase, small subunit [Streptococcus
parasanguinis F0405]
Length = 196
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 77/148 (52%), Gaps = 26/148 (17%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENET-------- 127
++ DNIDTDQI+P ++L L+ + + G Y + Y R++D+ T
Sbjct: 14 LMNDNIDTDQILPKQFLKLI-----DKKGFGKYLM------YAWRYLDDQYTEDPDFIFN 62
Query: 128 KTKYK---IIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGE---IY 181
K +Y+ I+I G NFG GSSREHA AL G V+A S+ I + N + G +
Sbjct: 63 KPEYRKATILITGDNFGAGSSREHAAWALADYGFKVVIAGSFGDIHYNNELNNGMLPIVQ 122
Query: 182 PLDSEARLCEECSTGDVVTIEIAESRLI 209
PL+ +L T D VT+++ E ++I
Sbjct: 123 PLEVRQKLASLKPT-DPVTVDLEEQKII 149
>gi|293365568|ref|ZP_06612277.1| 3-isopropylmalate dehydratase small subunit [Streptococcus oralis
ATCC 35037]
gi|307703522|ref|ZP_07640464.1| 3-isopropylmalate dehydratase, small subunit [Streptococcus oralis
ATCC 35037]
gi|291315936|gb|EFE56380.1| 3-isopropylmalate dehydratase small subunit [Streptococcus oralis
ATCC 35037]
gi|307622929|gb|EFO01924.1| 3-isopropylmalate dehydratase, small subunit [Streptococcus oralis
ATCC 35037]
Length = 197
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 76/148 (51%), Gaps = 26/148 (17%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT------ 129
++ DNIDTDQI+P ++L L+ + G Y + Y R++D+N T+
Sbjct: 14 LMNDNIDTDQILPKQFLKLIDK-----KGFGKYLM------YAWRYLDDNYTEDPDFVFN 62
Query: 130 -----KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGE---IY 181
K I+I+G NFG GSSREHA AL G V+A S+ I + N + G +
Sbjct: 63 RPEYRKSTILISGDNFGAGSSREHAAWALADYGFKVVIAGSFGDIHYNNELNNGMLPIVQ 122
Query: 182 PLDSEARLCEECSTGDVVTIEIAESRLI 209
P + +L + T D VT+++ + ++I
Sbjct: 123 PREVREKLAQLKPT-DQVTVDLEQQKII 149
>gi|226322411|ref|ZP_03797929.1| hypothetical protein COPCOM_00179 [Coprococcus comes ATCC 27758]
gi|225209211|gb|EEG91565.1| isopropylmalate/citramalate isomerase small subunit [Coprococcus
comes ATCC 27758]
Length = 169
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 89/173 (51%), Gaps = 24/173 (13%)
Query: 72 GLCYV-------VGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDE 124
G+C++ +++DTDQII ++YL L+P+ E++ S+A L + +
Sbjct: 6 GICFMEKGTIFKFHNDLDTDQIIASQYL-LLPN----LEEMKSHAFESLDPDFAQKV--- 57
Query: 125 NETKTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLD 184
++ G NFGCGSSRE AP L A G AV+A+S+ARIF+RN++ G P
Sbjct: 58 ----KPGDFVVGGENFGCGSSREQAPGVLKALGVKAVIAKSFARIFYRNAINIG--LPAI 111
Query: 185 SEARLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFA 236
L +E TGD + + + E GK Y + + + +++ GG+ A
Sbjct: 112 VCKDLPDEVKTGDQMELHMLEG--TAEANGKVYSCTKLPEYMQNILNQGGLIA 162
>gi|254422251|ref|ZP_05035969.1| 3-isopropylmalate dehydratase, small subunit [Synechococcus sp. PCC
7335]
gi|196189740|gb|EDX84704.1| 3-isopropylmalate dehydratase, small subunit [Synechococcus sp. PCC
7335]
Length = 200
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 60/106 (56%), Gaps = 12/106 (11%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY---K 132
+VG++IDTD+IIPA +L V ++ LG A + D + +Y K
Sbjct: 17 LVGNDIDTDRIIPARFLRAV-----TFDGLGDQVF----ADDRQQLADHPFNQPQYQNAK 67
Query: 133 IIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG 178
I++ NFGCGSSREHAP A+ G A+V ES+A IFF N VA G
Sbjct: 68 ILVVNRNFGCGSSREHAPQAIARWGIQALVGESFAEIFFGNCVAMG 113
>gi|448317378|ref|ZP_21506934.1| 3-isopropylmalate dehydratase, small subunit [Natronococcus
jeotgali DSM 18795]
gi|445603898|gb|ELY57851.1| 3-isopropylmalate dehydratase, small subunit [Natronococcus
jeotgali DSM 18795]
Length = 213
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 62/112 (55%), Gaps = 20/112 (17%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETK------- 128
+ G++IDTDQIIPA ++ +V ++ LG +A L RF +++E K
Sbjct: 22 IRGNDIDTDQIIPARFMKVVT-----FDGLGEFAFFDL------RFDEDDEQKDHPFNEE 70
Query: 129 --TKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG 178
+++ NFGCGSSREHAP AL G A++ ES+A IF N +A G
Sbjct: 71 RFQDSSVMVVNSNFGCGSSREHAPQALMRWGIDAIIGESFAEIFAGNCLALG 122
>gi|421489086|ref|ZP_15936474.1| 3-isopropylmalate dehydratase, small subunit [Streptococcus oralis
SK304]
gi|400368303|gb|EJP21318.1| 3-isopropylmalate dehydratase, small subunit [Streptococcus oralis
SK304]
Length = 197
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 76/148 (51%), Gaps = 26/148 (17%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT------ 129
++ DNIDTDQI+P ++L L+ + G Y + Y R++D+N T+
Sbjct: 14 LMNDNIDTDQILPKQFLKLIDK-----KGFGKYLM------YAWRYLDDNYTEDPDFVFN 62
Query: 130 -----KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGE---IY 181
K I+I+G NFG GSSREHA AL G V+A S+ I + N + G +
Sbjct: 63 RPEYRKATILISGDNFGAGSSREHAAWALADYGFKVVIAGSFGDIHYNNELNNGMLPIVQ 122
Query: 182 PLDSEARLCEECSTGDVVTIEIAESRLI 209
P + +L + T D VT+++ + ++I
Sbjct: 123 PKEVREKLAQLKPT-DQVTVDLEQQKII 149
>gi|387879473|ref|YP_006309776.1| 3-isopropylmalate dehydratase small subunit [Streptococcus
parasanguinis FW213]
gi|386792926|gb|AFJ25961.1| 3-isopropylmalate dehydratase small subunit [Streptococcus
parasanguinis FW213]
Length = 196
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 76/148 (51%), Gaps = 26/148 (17%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENET-------- 127
++ DNIDTDQI+P ++L L+ + G Y + Y R++D+ T
Sbjct: 14 LMNDNIDTDQILPKQFLKLIDK-----KGFGKYLM------YAWRYLDDQYTEDPDFIFN 62
Query: 128 KTKYK---IIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGE---IY 181
K +Y+ I+I G NFG GSSREHA AL G V+A S+ I + N + G +
Sbjct: 63 KPEYRKATILITGDNFGAGSSREHAAWALADYGFKVVIAGSFGDIHYNNELNNGMLPIVQ 122
Query: 182 PLDSEARLCEECSTGDVVTIEIAESRLI 209
PL+ +L T D VT+++ E ++I
Sbjct: 123 PLEVRQKLASLKPT-DPVTVDLEEQKII 149
>gi|422645532|ref|ZP_16708668.1| isopropylmalate isomerase small subunit [Pseudomonas syringae pv.
maculicola str. ES4326]
gi|330959082|gb|EGH59342.1| isopropylmalate isomerase small subunit [Pseudomonas syringae pv.
maculicola str. ES4326]
Length = 213
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 81/153 (52%), Gaps = 22/153 (14%)
Query: 80 NIDTDQIIPAEYLTLV------PSNPDEYEKLGSYALIGLPATYTTR------FIDENET 127
N+DTDQIIP ++L + P+ DE+ Y +G P ++ F+ +E
Sbjct: 18 NVDTDQIIPKQFLKSIKRTGFGPNLFDEWR----YLDVGQPYQDNSKRPLNHDFVLNHER 73
Query: 128 KTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEA 187
+++A NFGCGSSREHAP AL G A++A SYA IFF NS G + + +EA
Sbjct: 74 YQGASVLLARKNFGCGSSREHAPWALEEYGFCAIIAPSYADIFFNNSFKNGLLPIILAEA 133
Query: 188 RLCE-----ECSTGDVVTIEIAESRLINHTTGK 215
+ E E S G ++I++ +++ + GK
Sbjct: 134 EVDELFRQVEASPGYQLSIDL-QAQTVTRPDGK 165
>gi|409401783|ref|ZP_11251453.1| isopropylmalate isomerase small subunit [Acidocella sp. MX-AZ02]
gi|409129551|gb|EKM99398.1| isopropylmalate isomerase small subunit [Acidocella sp. MX-AZ02]
Length = 204
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 79/153 (51%), Gaps = 15/153 (9%)
Query: 79 DNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGL----PATYTTRFIDENETKTKYKII 134
DNIDTD+IIPA +L + + LG + + F+ E K +I+
Sbjct: 17 DNIDTDKIIPARFLKTI-----KRTGLGKSVFADMRYNADGSDKADFVLNQEPYRKAQIL 71
Query: 135 IAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEI---YPLDSEARLCE 191
+AG NFGCGSSREHAP AL G ++A S+A IFF NS G + P + A+L E
Sbjct: 72 VAGDNFGCGSSREHAPWALLDFGIRCIIAPSFADIFFNNSFKNGILPIALPEEICAKLRE 131
Query: 192 ECSTGDVVTIEI-AESRLINHTTGKE--YKLKP 221
+ + G + + E +++ G+E +++ P
Sbjct: 132 DAAMGGNARLTVDLERQMVVRPNGEEIPFQVDP 164
>gi|313680668|ref|YP_004058407.1| homoaconitase small subunit [Oceanithermus profundus DSM 14977]
gi|313153383|gb|ADR37234.1| homoaconitase small subunit [Oceanithermus profundus DSM 14977]
Length = 174
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 84/170 (49%), Gaps = 16/170 (9%)
Query: 74 CYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKI 133
++ GD+++TD ++P +Y + + +YA L + + + +
Sbjct: 14 IWLFGDDVNTDDVLPGKYAPFMVGE----DVFQNYAFAHLRPEFAREYRPGD-------L 62
Query: 134 IIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEEC 193
I+AG N G GSSRE+AP AL G A+VA+SYARIF+RN V G I P SE +
Sbjct: 63 IVAGRNLGLGSSREYAPEALKKLGVRAIVAKSYARIFYRNLVNLG-IVPFISE-EVVNAA 120
Query: 194 STGDVVTIEIAESRLINHTTGKEYKLK-PIGDLGPVIDAGGIFAYARKTG 242
GD V +I L G+ Y+L+ P L ++ G + Y +K G
Sbjct: 121 KDGDEVRYDIRTGTL--ELRGRTYRLEPPPAFLLAALEEGSVLEYFKKHG 168
>gi|332284543|ref|YP_004416454.1| isopropylmalate isomerase small subunit [Pusillimonas sp. T7-7]
gi|330428496|gb|AEC19830.1| isopropylmalate isomerase small subunit [Pusillimonas sp. T7-7]
Length = 216
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 77/153 (50%), Gaps = 16/153 (10%)
Query: 69 TFHGLCYVVG-DNIDTDQIIPAEYLTLVPSN---PDEYEKLGSYALIGLPATYTTR---- 120
T HGL + +N+DTD IIP ++L + P+ +++L Y G P ++
Sbjct: 6 THHGLVAPLDRENVDTDLIIPKQFLKSIKRTGFGPNLFDEL-RYLDHGEPGMDNSKRPLN 64
Query: 121 --FIDENETKTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG 178
F+ E I++A NFGCGSSREHAP AL G A++A SYA IFF NS G
Sbjct: 65 PDFVLNQERYQGASILLARKNFGCGSSREHAPWALSQFGFRAIIAPSYADIFFNNSFKNG 124
Query: 179 E---IYPLDSEARLCEECS--TGDVVTIEIAES 206
+ P ARL EE G + I++A
Sbjct: 125 LLPIVLPELQVARLFEEVKAFVGYKLRIDLARQ 157
>gi|402309183|ref|ZP_10828179.1| 3-isopropylmalate dehydratase, small subunit [Eubacterium sp. AS15]
gi|400373302|gb|EJP26236.1| 3-isopropylmalate dehydratase, small subunit [Eubacterium sp. AS15]
Length = 190
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 73/157 (46%), Gaps = 19/157 (12%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSN--------PDEYEKLGSYALIGLPATYTTRFIDENET 127
++ DNIDTD +IP YL V P Y+K G+ F+ E
Sbjct: 14 ILNDNIDTDILIPKNYLKSVKRTGFGDFVFAPWRYDKDGNK---------IADFVLNQEK 64
Query: 128 KTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEI-YPLDSE 186
I+I G NFGCGSSREHA AL G V+A Y+ IF+ N ++ G + LD E
Sbjct: 65 YADASILITGENFGCGSSREHAAWALQDYGIRVVIAGGYSDIFYNNWLSNGNVAIKLDFE 124
Query: 187 AR-LCEECSTGDVVTIEIAESRLINHTTGKEYKLKPI 222
R + E S G V I++ +++ ++ PI
Sbjct: 125 KRKMLSELSEGKEVEIDLINQKIVFGDLSIDFDFPPI 161
>gi|379335423|gb|AFD03403.1| 3-isopropylmalate dehydratase small subunit [uncultured archaeon
W5-61a]
Length = 166
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 63/109 (57%), Gaps = 12/109 (11%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
F G + G NIDTD IIP +L V ++P ++L + + GL ++ R
Sbjct: 3 FEGSIFRYGANIDTDVIIPGTFL--VTTDP---KRLAPHCMEGLDPDFSKRV-------Q 50
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG 178
++ NFGCGSSREHAP+++ A G S VVA+ +ARIFFRN++ G
Sbjct: 51 PGDMLFVEENFGCGSSREHAPISIKACGVSCVVAKGFARIFFRNAINIG 99
>gi|157412616|ref|YP_001483482.1| 3-isopropylmalate dehydratase small subunit [Prochlorococcus
marinus str. MIT 9215]
gi|157387191|gb|ABV49896.1| 3-isopropylmalate dehydratase small subunit [Prochlorococcus
marinus str. MIT 9215]
Length = 194
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 60/110 (54%), Gaps = 6/110 (5%)
Query: 70 FHGLCY-VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETK 128
+G C ++G++IDTD+IIPA +L V ++ LG T + + E
Sbjct: 1 MNGQCISLIGNDIDTDRIIPARFLKCV-----NFDSLGESVFEDDRKTLKGKHPFDLEDN 55
Query: 129 TKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG 178
I+I NFGCGSSREHAP AL G A++ ES+A IF+ N +A G
Sbjct: 56 NNASILIVNSNFGCGSSREHAPQALMRWGIKAIIGESFADIFYSNCIAIG 105
>gi|388582350|gb|EIM22655.1| putative 3-isopropylmalate dehydratase [Wallemia sebi CBS 633.66]
Length = 760
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 75/145 (51%), Gaps = 15/145 (10%)
Query: 80 NIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTT-----RFIDENETKTKYKII 134
NIDTD IIP ++L + + LGS A G+ T F+ E TK I+
Sbjct: 555 NIDTDMIIPKQFLKTI-----KRTGLGSAAFYGMRYDPQTGKPDPNFVLNQEPWTKASIL 609
Query: 135 I-AGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGE---IYPLDSEARLC 190
I GGNFGCGSSREHAP AL G +++ S+A IFF N+ G + P + +L
Sbjct: 610 INVGGNFGCGSSREHAPWALLDQGIRCIISTSFADIFFNNTFKNGMLPVVLPQEDVVKLS 669
Query: 191 EECSTGDVVTIEIAESRLINHTTGK 215
++ V +++ E++++ G+
Sbjct: 670 QDAKESKEVEVDL-ENKVVKRYNGE 693
>gi|365155711|ref|ZP_09352064.1| 3-isopropylmalate dehydratase, small subunit [Bacillus smithii
7_3_47FAA]
gi|363628066|gb|EHL78879.1| 3-isopropylmalate dehydratase, small subunit [Bacillus smithii
7_3_47FAA]
Length = 200
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 66/125 (52%), Gaps = 22/125 (17%)
Query: 65 EPTATFHGL-CYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFID 123
EP F+G+ C + N+DTDQIIP ++L + E + G + Y RF D
Sbjct: 2 EPINKFNGIVCPLNRTNVDTDQIIPKQFLKRI-----ERKGFGQFLF------YHWRFDD 50
Query: 124 ENETKT-------KYK---IIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRN 173
+ + +YK I++AG NFGCGSSREHAP AL G ++A S+A IF+ N
Sbjct: 51 DGNVREDFILNDPQYKDASILVAGENFGCGSSREHAPWALMDYGFKIIIAPSFADIFYNN 110
Query: 174 SVATG 178
+ G
Sbjct: 111 CLKNG 115
>gi|322389460|ref|ZP_08063012.1| 3-isopropylmalate dehydratase small subunit [Streptococcus
parasanguinis ATCC 903]
gi|321143838|gb|EFX39264.1| 3-isopropylmalate dehydratase small subunit [Streptococcus
parasanguinis ATCC 903]
Length = 196
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 77/148 (52%), Gaps = 26/148 (17%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENET-------- 127
++ DNIDTDQI+P ++L L+ + + G Y + Y R++D+ T
Sbjct: 14 LMNDNIDTDQILPKQFLKLI-----DKKGFGKYLM------YAWRYLDDQYTEDPDFIFN 62
Query: 128 KTKYK---IIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGE---IY 181
K +Y+ I+I G NFG GSSREHA AL G V+A S+ I + N + G +
Sbjct: 63 KPEYRKATILITGDNFGAGSSREHAAWALADYGFKVVIAGSFGDIHYNNELNNGMLPIVQ 122
Query: 182 PLDSEARLCEECSTGDVVTIEIAESRLI 209
PL+ +L T D VT+++ E ++I
Sbjct: 123 PLEVRQQLASLKPT-DPVTVDLEEQKII 149
>gi|300711466|ref|YP_003737280.1| 3-isopropylmalate dehydratase, small subunit [Halalkalicoccus
jeotgali B3]
gi|448296427|ref|ZP_21486485.1| 3-isopropylmalate dehydratase, small subunit [Halalkalicoccus
jeotgali B3]
gi|299125149|gb|ADJ15488.1| 3-isopropylmalate dehydratase, small subunit [Halalkalicoccus
jeotgali B3]
gi|445581752|gb|ELY36103.1| 3-isopropylmalate dehydratase, small subunit [Halalkalicoccus
jeotgali B3]
Length = 230
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 63/112 (56%), Gaps = 20/112 (17%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT------ 129
V G++IDTDQIIPA ++ +V ++ LG +A + RF E+ K
Sbjct: 40 VRGNDIDTDQIIPARFMKVVT-----FDGLGEFAF------FDQRFDSEDNEKEHPFNEG 88
Query: 130 KYK---IIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG 178
+Y+ +++ NFGCGSSREHAP AL G A+V ES+A IF N +A G
Sbjct: 89 QYQGANVLVVNSNFGCGSSREHAPQALQRWGIDAIVGESFAEIFAGNCLALG 140
>gi|153810128|ref|ZP_01962796.1| hypothetical protein RUMOBE_00509 [Ruminococcus obeum ATCC 29174]
gi|149833307|gb|EDM88388.1| isopropylmalate/citramalate isomerase small subunit [Ruminococcus
obeum ATCC 29174]
Length = 160
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 91/173 (52%), Gaps = 23/173 (13%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + +++DTDQII ++YL L+P N DE + +T +D + K K
Sbjct: 4 GTIFKFHNDLDTDQIIASQYL-LLP-NLDEMK------------GHTFESLDPDFAK-KV 48
Query: 132 K---IIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEAR 188
K ++ G NFGCGSSRE AP L A G AV+A+S+ARIFFRN++ G P
Sbjct: 49 KPGDFVVGGENFGCGSSREQAPGVLKALGVQAVIAKSFARIFFRNAINIG--LPAIVCKD 106
Query: 189 LCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
L ++ TGD + + +++ + GK Y + + + +++ GG+ A K
Sbjct: 107 LPDDVQTGDTMELHMSDGTAV--ANGKTYTCTKLPEYMQGILNQGGLIASLNK 157
>gi|393757702|ref|ZP_10346526.1| isopropylmalate isomerase small subunit [Alcaligenes faecalis
subsp. faecalis NCIB 8687]
gi|393165394|gb|EJC65443.1| isopropylmalate isomerase small subunit [Alcaligenes faecalis
subsp. faecalis NCIB 8687]
Length = 216
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 78/145 (53%), Gaps = 15/145 (10%)
Query: 79 DNIDTDQIIPAEYLTLVPSN---PDEYEKLGSYALIGLPATYTTR------FIDENETKT 129
+N+DTD IIP ++L + P+ +++L Y G P +R F+ +
Sbjct: 17 ENVDTDLIIPKQFLKSIKRTGFGPNLFDEL-RYLDHGEPGMDNSRRPLNPDFVLNQDRYQ 75
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSE--- 186
+++A NFGCGSSREHAP AL G A++A S+A IFF NS G + + +E
Sbjct: 76 GASVLLARKNFGCGSSREHAPWALMQYGFRAIIAPSFADIFFNNSFKNGLLPIVLNELDV 135
Query: 187 ARLCEECST--GDVVTIEIAESRLI 209
ARL +E G + I++AE R+I
Sbjct: 136 ARLFDEVKAFPGYKLRIDLAEQRVI 160
>gi|402701699|ref|ZP_10849678.1| isopropylmalate isomerase small subunit [Pseudomonas fragi A22]
Length = 214
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 81/158 (51%), Gaps = 22/158 (13%)
Query: 80 NIDTDQIIPAEYLTLV------PSNPDEYEKLGSYALIGLPATYTTR------FIDENET 127
N+DTDQIIP ++L + P+ DE+ Y +G P +R F+ E
Sbjct: 18 NVDTDQIIPKQFLKSIKRTGFGPNLFDEWR----YLDVGQPYQDNSRRPLNKDFVLNAER 73
Query: 128 KTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEA 187
+++A NFGCGSSREHAP AL G +++A SYA IFF NS G + + S+A
Sbjct: 74 YQGASVLLARENFGCGSSREHAPWALEEYGFRSIIAPSYADIFFNNSFKNGLLPIILSDA 133
Query: 188 RLCE-----ECSTGDVVTIEIAESRLINHTTGKEYKLK 220
+ E E G ++I++ E++ + GK K +
Sbjct: 134 EVDELFAQVEAEPGYQLSIDL-EAQTVTRPDGKVLKFE 170
>gi|218132705|ref|ZP_03461509.1| hypothetical protein BACPEC_00566 [[Bacteroides] pectinophilus ATCC
43243]
gi|217992431|gb|EEC58434.1| 3-isopropylmalate dehydratase, small subunit [[Bacteroides]
pectinophilus ATCC 43243]
Length = 163
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/177 (36%), Positives = 97/177 (54%), Gaps = 19/177 (10%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
F G +V+GD+IDTD IIP EYL L D+ +K YA L + D +
Sbjct: 4 FTGKVWVLGDDIDTDIIIPTEYLAL--KTVDDMKK---YAFSPLRPELAGQIGDGD---- 54
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
II+AG NFGCGSSRE AP + V+A+S+ARIFFRNS+ G + L +
Sbjct: 55 ---IIVAGKNFGCGSSREQAPEIIKHLNIRCVIAKSFARIFFRNSINNGLL--LIENKDI 109
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIF-AYARKTGMI 244
+ GD +T+ + + N GK+Y ++P+ D L +++AGG+ A ++ G++
Sbjct: 110 PDAVREGDELTVIMNDKITFN---GKDYPIEPLPDNLMEILNAGGLVKAMQKRNGLV 163
>gi|344211359|ref|YP_004795679.1| 3-isopropylmalate dehydratase small subunit [Haloarcula hispanica
ATCC 33960]
gi|343782714|gb|AEM56691.1| 3-isopropylmalate dehydratase small subunit [Haloarcula hispanica
ATCC 33960]
Length = 214
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 60/112 (53%), Gaps = 20/112 (17%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETK------- 128
+ G++IDTDQIIPA ++ +V ++ LG +A L RF DE+ K
Sbjct: 21 IRGNDIDTDQIIPARFMKVVT-----FDGLGEFAFFDL------RFDDEDNEKDHPFNEE 69
Query: 129 --TKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG 178
+++ NFGCGSSREHAP AL G A++ E +A IF N +A G
Sbjct: 70 RFQDSNVMVVNNNFGCGSSREHAPQALMRWGIDAIIGEGFAEIFAGNCLALG 121
>gi|298158970|gb|EFI00031.1| 3-isopropylmalate dehydratase small subunit [Pseudomonas savastanoi
pv. savastanoi NCPPB 3335]
Length = 213
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 81/153 (52%), Gaps = 22/153 (14%)
Query: 80 NIDTDQIIPAEYLTLV------PSNPDEYEKLGSYALIGLPATYTTR------FIDENET 127
N+DTDQIIP ++L + P+ DE+ Y +G P ++ F+ +E
Sbjct: 18 NVDTDQIIPKQFLKSIKRTVFGPNLFDEWR----YLDVGQPYQDNSKRPLNHDFVLNHER 73
Query: 128 KTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEA 187
+++A NFGCGSSREHAP AL G A++A SYA IFF NS G + + SE+
Sbjct: 74 YQGASVLLARENFGCGSSREHAPWALEEYGFCAIIAPSYADIFFNNSFKNGLLPIILSES 133
Query: 188 RLCE-----ECSTGDVVTIEIAESRLINHTTGK 215
+ E E S G ++I++ +++ + GK
Sbjct: 134 EVDELFKQVEASPGYQLSIDL-QAQTVTRPDGK 165
>gi|448678451|ref|ZP_21689458.1| 3-isopropylmalate dehydratase small subunit [Haloarcula
argentinensis DSM 12282]
gi|445772438|gb|EMA23483.1| 3-isopropylmalate dehydratase small subunit [Haloarcula
argentinensis DSM 12282]
Length = 214
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 60/112 (53%), Gaps = 20/112 (17%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETK------- 128
+ G++IDTDQIIPA ++ +V ++ LG +A L RF DE+ K
Sbjct: 21 IRGNDIDTDQIIPARFMKVVT-----FDGLGEFAFFDL------RFDDEDNEKDHPFNEE 69
Query: 129 --TKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG 178
+++ NFGCGSSREHAP AL G A++ E +A IF N +A G
Sbjct: 70 RFQDSNVMVVNNNFGCGSSREHAPQALMRWGIDAIIGEGFAEIFAGNCLALG 121
>gi|424778889|ref|ZP_18205827.1| isopropylmalate isomerase small subunit [Alcaligenes sp. HPC1271]
gi|422886318|gb|EKU28742.1| isopropylmalate isomerase small subunit [Alcaligenes sp. HPC1271]
Length = 214
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 78/145 (53%), Gaps = 15/145 (10%)
Query: 79 DNIDTDQIIPAEYLTLVPSN---PDEYEKLGSYALIGLPATYTTR------FIDENETKT 129
+N+DTD IIP ++L + P+ +++L Y G P +R F+ +
Sbjct: 17 ENVDTDLIIPKQFLKSIKRTGFGPNLFDEL-RYLDHGEPGMDNSRRPLNPDFVLNQDRYQ 75
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSE--- 186
+++A NFGCGSSREHAP AL G A++A S+A IFF NS G + + +E
Sbjct: 76 GASVLLARKNFGCGSSREHAPWALMQYGFRAIIAPSFADIFFNNSFKNGLLPIVLNELDI 135
Query: 187 ARLCEECST--GDVVTIEIAESRLI 209
ARL +E G + I++AE R+I
Sbjct: 136 ARLFDEVKAFPGYKLRIDLAEQRVI 160
>gi|78778642|ref|YP_396754.1| 3-isopropylmalate dehydratase, small subunit [Prochlorococcus
marinus str. MIT 9312]
gi|78712141|gb|ABB49318.1| 3-isopropylmalate dehydratase, small subunit [Prochlorococcus
marinus str. MIT 9312]
Length = 207
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 57/103 (55%), Gaps = 5/103 (4%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKIII 135
++G++IDTD+IIPA +L V ++ LG T + + E I+I
Sbjct: 22 LIGNDIDTDRIIPARFLKCV-----NFDSLGKSVFEDDRETLKGKHPFDLEKHKNASILI 76
Query: 136 AGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG 178
NFGCGSSREHAP AL G A++ ES+A IF+ N +A G
Sbjct: 77 VNSNFGCGSSREHAPQALMRWGIKAIIGESFAEIFYSNCIAIG 119
>gi|427729217|ref|YP_007075454.1| 3-isopropylmalate dehydratase small subunit [Nostoc sp. PCC 7524]
gi|427365136|gb|AFY47857.1| 3-isopropylmalate dehydratase, small subunit [Nostoc sp. PCC 7524]
Length = 202
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 65/127 (51%), Gaps = 17/127 (13%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKIII 135
+VG++IDTD+IIPA +L V ++ LG A I + + I+I
Sbjct: 15 LVGNDIDTDRIIPARFLKAV-----TFDGLGEAAFIDDRTALNGQHPFDQPQYQGSNILI 69
Query: 136 AGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEECST 195
NFGCGSSREHAP A+ G A++ ES+A IFF N VA G P C T
Sbjct: 70 VNRNFGCGSSREHAPQAISKWGIQALIGESFAEIFFGNCVAIG--VP----------CLT 117
Query: 196 GDVVTIE 202
D VT++
Sbjct: 118 ADAVTVK 124
>gi|448627478|ref|ZP_21671944.1| 3-isopropylmalate dehydratase small subunit [Haloarcula
vallismortis ATCC 29715]
gi|445758786|gb|EMA10082.1| 3-isopropylmalate dehydratase small subunit [Haloarcula
vallismortis ATCC 29715]
Length = 214
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 60/112 (53%), Gaps = 20/112 (17%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETK------- 128
+ G++IDTDQIIPA ++ +V ++ LG +A L RF DE+ K
Sbjct: 21 IRGNDIDTDQIIPARFMKVVT-----FDGLGEFAFFDL------RFDDEDNEKDHPFNEE 69
Query: 129 --TKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG 178
+++ NFGCGSSREHAP AL G A++ E +A IF N +A G
Sbjct: 70 RFQDANVMVVNNNFGCGSSREHAPQALMRWGIDAIIGEGFAEIFAGNCLALG 121
>gi|317128105|ref|YP_004094387.1| 3-isopropylmalate dehydratase, small subunit [Bacillus
cellulosilyticus DSM 2522]
gi|315473053|gb|ADU29656.1| 3-isopropylmalate dehydratase, small subunit [Bacillus
cellulosilyticus DSM 2522]
Length = 194
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/118 (43%), Positives = 61/118 (51%), Gaps = 22/118 (18%)
Query: 72 GLCYVVGD-NIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFID-----EN 125
GL Y + NIDTDQIIP ++L + E + G + Y RF D EN
Sbjct: 9 GLVYPLNRANIDTDQIIPKQFLKRI-----ERQGFGQFLF------YNWRFHDDGTPREN 57
Query: 126 ETKTKYK-----IIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG 178
T K I+IAG NFGCGSSREHAP AL G ++A SYA IF+ N V G
Sbjct: 58 FTLNDEKYDGASILIAGDNFGCGSSREHAPWALQDYGFKVIIAPSYADIFYSNCVKNG 115
>gi|407461948|ref|YP_006773265.1| 3-isopropylmalate dehydratase small subunit [Candidatus
Nitrosopumilus koreensis AR1]
gi|407045570|gb|AFS80323.1| 3-isopropylmalate dehydratase small subunit [Candidatus
Nitrosopumilus koreensis AR1]
Length = 194
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 68/126 (53%), Gaps = 24/126 (19%)
Query: 80 NIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENE--------TKTKY 131
N+DTDQI+P ++L LV +K G G + R+ DENE +KY
Sbjct: 18 NVDTDQIVPKQFLKLV-------QKSG----FGKFLFFNWRY-DENEKPKSDFVLNDSKY 65
Query: 132 ---KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEAR 188
KI++AG NFGCGSSREHA AL G + ++A S+A IFF N G I P+ + +
Sbjct: 66 DGSKILVAGDNFGCGSSREHAVWALQDYGFAVIIAPSFADIFFSNCFKNG-ILPISLDQK 124
Query: 189 LCEECS 194
+ E+
Sbjct: 125 IVEKLQ 130
>gi|385261312|ref|ZP_10039440.1| 3-isopropylmalate dehydratase, small subunit [Streptococcus sp.
SK140]
gi|385188684|gb|EIF36161.1| 3-isopropylmalate dehydratase, small subunit [Streptococcus sp.
SK140]
Length = 197
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 83/170 (48%), Gaps = 36/170 (21%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT------ 129
++ DNIDTDQI+P ++L L+ + G Y + Y R++D+ T+
Sbjct: 14 LMNDNIDTDQILPKQFLKLIDK-----KGFGKYLM------YAWRYLDDRYTEDPDFVFN 62
Query: 130 -----KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGE---IY 181
K I+I+G NFG GSSREHA AL G V+A S+ I + N + G I
Sbjct: 63 RPEYRKATILISGDNFGAGSSREHAAWALADYGFKVVIAGSFGDIHYNNELNNGMLPIIQ 122
Query: 182 PLDSEARLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLGPVIDA 231
P + +L + T D VT+++ + ++I+ PIG+ ID+
Sbjct: 123 PREVREKLAQLQPT-DQVTVDLEQQKIIS----------PIGEFSFEIDS 161
>gi|325184766|emb|CCA19256.1| 3isopropylmalate dehydratase large subunit putative [Albugo
laibachii Nc14]
Length = 687
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 81/163 (49%), Gaps = 16/163 (9%)
Query: 50 SVIPKATSADSRATKEPTATFHGLCYVVGDNIDTDQIIPAEYLTLVPSNP-------DEY 102
SV+ AT+ A F GL GD++DTD +IPA++L L ++P E
Sbjct: 473 SVLEHATAGTVEALPR---QFDGLVQRFGDDVDTDAMIPAQFLGLNKASPLWPADCETEE 529
Query: 103 EKLGSYALIGLPATYTTRFIDENETKTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVV 162
E L SY+ + + +R K II+AG FGCGSSRE A + L A G AV+
Sbjct: 530 EVLASYSFAYVRPEFVSR------VKNGGTIIVAGSAFGCGSSREEAAICLKAVGIRAVI 583
Query: 163 AESYARIFFRNSVATGEIYPLDSEARLCEECSTGDVVTIEIAE 205
A+S+A I+ RN + + ++ + E G V +++ +
Sbjct: 584 AKSFAYIYARNQPNNALLGIVVTDEKFYELAQEGSRVVVDVQQ 626
>gi|448651496|ref|ZP_21680565.1| 3-isopropylmalate dehydratase small subunit [Haloarcula californiae
ATCC 33799]
gi|445771023|gb|EMA22081.1| 3-isopropylmalate dehydratase small subunit [Haloarcula californiae
ATCC 33799]
Length = 214
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 59/110 (53%), Gaps = 20/110 (18%)
Query: 78 GDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETK--------- 128
G++IDTDQIIPA ++ +V ++ LG +A L RF DE+ K
Sbjct: 23 GNDIDTDQIIPARFMKVVT-----FDGLGEFAFFDL------RFDDEDNEKDHPFNEERF 71
Query: 129 TKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG 178
+++ NFGCGSSREHAP AL G A++ E +A IF N +A G
Sbjct: 72 QDSNVMVVNNNFGCGSSREHAPQALMRWGIDAIIGEGFAEIFAGNCLALG 121
>gi|55377241|ref|YP_135091.1| 3-isopropylmalate dehydratase small subunit [Haloarcula marismortui
ATCC 43049]
gi|448640482|ref|ZP_21677385.1| 3-isopropylmalate dehydratase small subunit [Haloarcula sinaiiensis
ATCC 33800]
gi|55229966|gb|AAV45385.1| 3-isopropylmalate dehydratase small subunit [Haloarcula marismortui
ATCC 43049]
gi|445761792|gb|EMA13031.1| 3-isopropylmalate dehydratase small subunit [Haloarcula sinaiiensis
ATCC 33800]
Length = 214
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 59/110 (53%), Gaps = 20/110 (18%)
Query: 78 GDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETK--------- 128
G++IDTDQIIPA ++ +V ++ LG +A L RF DE+ K
Sbjct: 23 GNDIDTDQIIPARFMKVVT-----FDGLGEFAFFDL------RFDDEDNEKDHPFNEERF 71
Query: 129 TKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG 178
+++ NFGCGSSREHAP AL G A++ E +A IF N +A G
Sbjct: 72 QDSNVMVVNNNFGCGSSREHAPQALMRWGIDAIIGEGFAEIFAGNCLALG 121
>gi|448727203|ref|ZP_21709571.1| 3-isopropylmalate dehydratase small subunit [Halococcus morrhuae
DSM 1307]
gi|445791698|gb|EMA42332.1| 3-isopropylmalate dehydratase small subunit [Halococcus morrhuae
DSM 1307]
Length = 203
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 64/112 (57%), Gaps = 20/112 (17%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT------ 129
V G++IDTDQ+IPA ++ ++ ++ LG +A + RF DE+ K
Sbjct: 19 VRGNDIDTDQVIPARFMKVIT-----FDGLGEFAF------FDQRFDDEDNEKDHPMNEE 67
Query: 130 KYK---IIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG 178
+++ +++ NFGCGSSREHAP AL G A++ ES+A IF N +A G
Sbjct: 68 RFRDASVMVVNANFGCGSSREHAPQALMRWGIDALIGESFAEIFAGNCLALG 119
>gi|402572739|ref|YP_006622082.1| 3-isopropylmalate dehydratase small subunit [Desulfosporosinus
meridiei DSM 13257]
gi|402253936|gb|AFQ44211.1| 3-isopropylmalate dehydratase, small subunit [Desulfosporosinus
meridiei DSM 13257]
Length = 174
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 91/167 (54%), Gaps = 19/167 (11%)
Query: 80 NIDTDQIIPAEYLTLVPSNPDEYEKLGSYAL--IGLPATYTTRFIDENETKTKYKIIIAG 137
+I+TD+IIPA+YLT + E L Y L + LP F ++ + + K +++
Sbjct: 15 DINTDEIIPAKYLTEITK-----EALQPYLLEDLTLPG-----FNNKEDIQNK-TVLVTR 63
Query: 138 GNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEI---YPLDSEARLCEECS 194
NFGCGSSREHAP AL G + V+AES+ARIF +N G + P D L E +
Sbjct: 64 ANFGCGSSREHAPWALEVNGINVVIAESFARIFRQNMYNCGMLAIELPADKLNYLFENYA 123
Query: 195 TGD-VVTIEIAESRLINHTTGKEYKLK-PIGDLGP-VIDAGGIFAYA 238
D ++TI+I ++++ ++ + ++ +G+ ++ GG YA
Sbjct: 124 GKDTLITIDIDRNKIVVTSSDQSEEIDFQVGEFDKTLVKEGGWVGYA 170
>gi|121534913|ref|ZP_01666732.1| 3-isopropylmalate dehydratase, small subunit [Thermosinus
carboxydivorans Nor1]
gi|121306512|gb|EAX47435.1| 3-isopropylmalate dehydratase, small subunit [Thermosinus
carboxydivorans Nor1]
Length = 162
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 90/173 (52%), Gaps = 19/173 (10%)
Query: 71 HGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTK 130
G + GDNI+TD I P +Y+ L + YA+ + + ++ +
Sbjct: 6 RGKVHKYGDNINTDIISPPQYMEL------SIAEAAKYAMSAIDPEFASKV-------QR 52
Query: 131 YKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLC 190
I++AG NFG GSSRE +P+ L G A+VA+ +ARIF+RN++ G P+ E
Sbjct: 53 GDILVAGANFGSGSSRETSPLTLKYLGVGAIVAKFFARIFYRNAINLG--IPV-IECADV 109
Query: 191 EECSTGDVVTIEIAESRLINHTTGKE--YKLKPIGDLGPVIDAGGIFAYARKT 241
++ GD + IE+ E+ +I + T +E Y K + +++ GG+ Y +KT
Sbjct: 110 DKIQNGDTIEIEL-EAGIIRNVTRQETYYGTKIPAHILELVNVGGLVPYLKKT 161
>gi|76801740|ref|YP_326748.1| 3-isopropylmalate dehydratase, small subunit [Natronomonas
pharaonis DSM 2160]
gi|76557605|emb|CAI49187.1| 3-isopropylmalate dehydratase small subunit [Natronomonas pharaonis
DSM 2160]
Length = 214
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 64/112 (57%), Gaps = 20/112 (17%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT------ 129
V G++IDTDQIIPA ++ +V ++ LG +A + RF +E+ K
Sbjct: 20 VRGNDIDTDQIIPARFMKVVT-----FDGLGEFAF------FDQRFDEEDNEKDHPFNED 68
Query: 130 KYK---IIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG 178
+Y+ +++ NFGCGSSREHAP AL G A++ ES+A IF N +A G
Sbjct: 69 QYQDANVMVVNANFGCGSSREHAPQALVRWGIDAIIGESFAEIFAGNCLALG 120
>gi|123967814|ref|YP_001008672.1| 3-isopropylmalate dehydratase small subunit [Prochlorococcus
marinus str. AS9601]
gi|123197924|gb|ABM69565.1| 3-isopropylmalate dehydratase small subunit [Prochlorococcus
marinus str. AS9601]
Length = 207
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 60/112 (53%), Gaps = 6/112 (5%)
Query: 68 ATFHGLCY-VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENE 126
+ +G C ++G++IDTD+IIPA +L V ++ LG R + E
Sbjct: 13 SNINGQCIPLIGNDIDTDRIIPARFLKCV-----NFDLLGESVFADDRKNLKGRHPFDLE 67
Query: 127 TKTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG 178
I++ NFGCGSSREHAP AL G A++ ES+A IF+ N +A G
Sbjct: 68 ENKNASILVVNSNFGCGSSREHAPQALLRWGIKAIIGESFADIFYSNCIAIG 119
>gi|386713874|ref|YP_006180197.1| 3-isopropylmalate dehydratase small subunit [Halobacillus
halophilus DSM 2266]
gi|384073430|emb|CCG44922.1| 3-isopropylmalate dehydratase small subunit [Halobacillus
halophilus DSM 2266]
Length = 201
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 64/130 (49%), Gaps = 23/130 (17%)
Query: 65 EPTATFHGLCYVVG-DNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFID 123
EP HG+ Y + N+DTDQIIP ++L + E+ G G Y RF D
Sbjct: 2 EPLKKHHGIVYPLNRSNVDTDQIIPKQFLKRI-------ERTG----FGQFLFYNWRFND 50
Query: 124 ENETKTKYK----------IIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRN 173
+ K + I++ G NFGCGSSREHAP A+ G V+A S+A IF+ N
Sbjct: 51 DGSLKENFSLNDPKYNDASILVGGENFGCGSSREHAPWAIQDYGFKVVIAPSFADIFYSN 110
Query: 174 SVATGEIYPL 183
G I P+
Sbjct: 111 CFKNG-ILPI 119
>gi|300868805|ref|ZP_07113412.1| 3-isopropylmalate dehydratase, LeuC subunit [Oscillatoria sp. PCC
6506]
gi|300333156|emb|CBN58604.1| 3-isopropylmalate dehydratase, LeuC subunit [Oscillatoria sp. PCC
6506]
Length = 581
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 63/112 (56%), Gaps = 14/112 (12%)
Query: 77 VGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKIIIA 136
+GDNI+TD IIPA++ T ++P+ ++ LIG Y I A
Sbjct: 10 LGDNINTDDIIPAKWCT--TADPEYLKQYAFEHLIG------------EGNLLGYSEIEA 55
Query: 137 GGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEAR 188
G NFGCGSSREHAP+A+ AAG V A S+A IF+RNS+ G + S+ +
Sbjct: 56 GRNFGCGSSREHAPIAIKAAGIRKVRAHSFAEIFYRNSINIGLALEISSQPQ 107
>gi|291522453|emb|CBK80746.1| 3-isopropylmalate dehydratase, small subunit [Coprococcus catus
GD/7]
Length = 163
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 93/170 (54%), Gaps = 18/170 (10%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G +++GD+IDTD IIP EYL + + + YA L + K
Sbjct: 6 GKVWILGDDIDTDIIIPTEYLAM-----KTIDDMKQYAFSPLRPELAGQI-------QKG 53
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
II+AG NFGCGSSRE AP + A G V+A+S+ARIFFRN++ G + L + L +
Sbjct: 54 DIIVAGKNFGCGSSREQAPEIIKALGIQCVIAKSFARIFFRNAINNGLL--LIEQPNLYD 111
Query: 192 ECSTGDVVTIEIAESRLINHTTGKEYKLKPI-GDLGPVIDAGGIFAYARK 240
+ GD +T+ + ++ +++ + KEY + + +L +I AGG+ RK
Sbjct: 112 DIKEGDTITVHM--NKHVDYNS-KEYPIAALPENLMRIIQAGGLVGAMRK 158
>gi|21232759|ref|NP_638676.1| isopropylmalate isomerase small subunit [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66767167|ref|YP_241929.1| isopropylmalate isomerase small subunit [Xanthomonas campestris pv.
campestris str. 8004]
gi|384429281|ref|YP_005638641.1| 3-isopropylmalate dehydratase small subunit [Xanthomonas campestris
pv. raphani 756C]
gi|23396641|sp|Q8P5K9.1|LEUD_XANCP RecName: Full=3-isopropylmalate dehydratase small subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|81306849|sp|Q4UYG4.1|LEUD_XANC8 RecName: Full=3-isopropylmalate dehydratase small subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|21114576|gb|AAM42600.1| 3-isopropylmalate dehydratase small subunit [Xanthomonas campestris
pv. campestris str. ATCC 33913]
gi|66572499|gb|AAY47909.1| 3-isopropylmalate dehydratase small subunit [Xanthomonas campestris
pv. campestris str. 8004]
gi|341938384|gb|AEL08523.1| 3-isopropylmalate dehydratase, small subunit [Xanthomonas
campestris pv. raphani 756C]
Length = 215
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/158 (36%), Positives = 86/158 (54%), Gaps = 22/158 (13%)
Query: 80 NIDTDQIIPAEYLTLV------PSNPDEYEKLGSYALIGLPA-TYTTRFIDENETKT--K 130
N+DTDQIIP ++L + P+ DE+ Y IG P +TR +++ +
Sbjct: 18 NVDTDQIIPKQFLKSIKRTGFGPNLFDEWR----YLDIGEPGRDNSTRPLNQEFVLNFPR 73
Query: 131 YK---IIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEA 187
Y+ +++A NFGCGSSREHAP AL G AV+A S+A IF+ NS G + + +EA
Sbjct: 74 YQGASVLLARENFGCGSSREHAPWALDEYGFRAVIAPSFADIFYNNSFKNGLLPIVLAEA 133
Query: 188 R---LCEEC--STGDVVTIEIAESRLINHTTGKEYKLK 220
L E+C + G +T+++A R + G EY +
Sbjct: 134 EMDALFEQCLGNEGYQLTVDLAAQR-VRRPDGVEYAFE 170
>gi|332708446|ref|ZP_08428422.1| 3-isopropylmalate dehydratase, small subunit [Moorea producens 3L]
gi|332352777|gb|EGJ32341.1| 3-isopropylmalate dehydratase, small subunit [Moorea producens 3L]
Length = 200
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 57/103 (55%), Gaps = 5/103 (4%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKIII 135
VVG++IDTD+IIPA +L V ++ LG + A + + +++
Sbjct: 15 VVGNDIDTDRIIPARFLRCV-----TFDGLGQQVFVDDRAQANGQHPFDQPHYQGATVLV 69
Query: 136 AGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG 178
GNFGCGSSREHAP A+ G +V ES+A IFF N +A G
Sbjct: 70 VNGNFGCGSSREHAPQAISKWGIQGIVGESFAEIFFGNCLAIG 112
>gi|347752460|ref|YP_004860025.1| 3-isopropylmalate dehydratase small subunit [Bacillus coagulans
36D1]
gi|347584978|gb|AEP01245.1| 3-isopropylmalate dehydratase, small subunit [Bacillus coagulans
36D1]
Length = 196
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/126 (41%), Positives = 66/126 (52%), Gaps = 24/126 (19%)
Query: 65 EPTATFHGLCYVVG-DNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFID 123
EP TF GL + + N+DTDQIIP ++L + E+ G G Y RF D
Sbjct: 2 EPFQTFSGLVFPLDRKNVDTDQIIPKQFLKRI-------ERQG----FGECLFYNWRF-D 49
Query: 124 ENETKT--------KY---KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFR 172
E+ K KY +I++AG NFGCGSSREHAP AL G V+A S+A IF
Sbjct: 50 ESGNKREDFPLNDPKYDGAQILVAGDNFGCGSSREHAPWALQDYGFKVVIAPSFADIFHN 109
Query: 173 NSVATG 178
N + G
Sbjct: 110 NCLKNG 115
>gi|391228925|ref|ZP_10265131.1| 3-isopropylmalate dehydratase, small subunit [Opitutaceae bacterium
TAV1]
gi|391218586|gb|EIP97006.1| 3-isopropylmalate dehydratase, small subunit [Opitutaceae bacterium
TAV1]
Length = 202
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 65/115 (56%), Gaps = 22/115 (19%)
Query: 75 YVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENE-------- 126
+V G++IDTD+IIPA ++ V ++ LG + Y R E +
Sbjct: 15 FVPGNDIDTDRIIPARFMKCV-----TFDGLGEFLF------YDVRHTPEGQPVVPAHPI 63
Query: 127 TKTKYK---IIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG 178
K ++K I+++G NFGCGSSREHAP A+ AG AV+AE++A IFF NS G
Sbjct: 64 DKPEHKGATILLSGANFGCGSSREHAPQAIHKAGFRAVIAENFAEIFFGNSTTLG 118
>gi|355670915|ref|ZP_09057562.1| 3-isopropylmalate dehydratase small subunit [Clostridium citroniae
WAL-17108]
gi|354815831|gb|EHF00421.1| 3-isopropylmalate dehydratase small subunit [Clostridium citroniae
WAL-17108]
Length = 163
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/172 (36%), Positives = 96/172 (55%), Gaps = 18/172 (10%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
F G +V+GD+IDTD IIP EYL L + + Y L + I E +
Sbjct: 4 FTGRVWVLGDDIDTDIIIPTEYLAL-----KTIDDMKQYGFSPLRPELAAQ-IREGD--- 54
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
II+AG NFGCGSSRE AP + A G V+A+S+ARIFFRNS+ G + L + L
Sbjct: 55 ---IIVAGKNFGCGSSREQAPEIIKALGIKCVIAKSFARIFFRNSINNGLL--LIEQPDL 109
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPI-GDLGPVIDAGGIFAYARK 240
++ + GD +T+ + +R +++ ++Y + + +L +I+AGG+ RK
Sbjct: 110 YDDMTEGDSITVTV--NRHVDYKE-RQYTIASLPQNLVDIINAGGLVKAMRK 158
>gi|373850926|ref|ZP_09593727.1| 3-isopropylmalate dehydratase, small subunit [Opitutaceae bacterium
TAV5]
gi|372477091|gb|EHP37100.1| 3-isopropylmalate dehydratase, small subunit [Opitutaceae bacterium
TAV5]
Length = 202
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 65/115 (56%), Gaps = 22/115 (19%)
Query: 75 YVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENE-------- 126
+V G++IDTD+IIPA ++ V ++ LG + Y R E +
Sbjct: 15 FVPGNDIDTDRIIPARFMKCV-----TFDGLGEFLF------YDVRHTPEGQPVVPAHPI 63
Query: 127 TKTKYK---IIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG 178
K ++K I+++G NFGCGSSREHAP A+ AG AV+AE++A IFF NS G
Sbjct: 64 DKPEHKGATILLSGANFGCGSSREHAPQAIHKAGFRAVIAENFAEIFFGNSTTLG 118
>gi|162448355|ref|YP_001610722.1| isopropylmalate isomerase small subunit [Sorangium cellulosum So
ce56]
gi|161158937|emb|CAN90242.1| Isopropylmalate isomerase small subunit [Sorangium cellulosum So
ce56]
Length = 205
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/114 (41%), Positives = 63/114 (55%), Gaps = 22/114 (19%)
Query: 75 YVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY--- 131
+V GD+IDTD+IIPA +L V ++ +G + RF DE K ++
Sbjct: 15 HVPGDDIDTDRIIPARFLKCV-----TFDGIGEHLF------RDVRF-DERGEKREHPLN 62
Query: 132 -------KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG 178
++IA NFGCGSSREHAP ++ AG AV+AES+A IFF NS G
Sbjct: 63 DPRFAGATVLIADHNFGCGSSREHAPQSIAKAGFKAVIAESFAEIFFGNSTTLG 116
>gi|398978108|ref|ZP_10687564.1| 3-isopropylmalate dehydratase, small subunit [Pseudomonas sp. GM25]
gi|398137435|gb|EJM26494.1| 3-isopropylmalate dehydratase, small subunit [Pseudomonas sp. GM25]
Length = 214
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 81/158 (51%), Gaps = 22/158 (13%)
Query: 80 NIDTDQIIPAEYLTLV------PSNPDEYEKLGSYALIGLPATYTTR------FIDENET 127
N+DTDQIIP ++L + P+ DE+ Y +G P ++ F+ E
Sbjct: 18 NVDTDQIIPKQFLKSIKRTGFGPNLFDEWR----YLDVGQPYQDNSKRPLNKEFVLNAER 73
Query: 128 KTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEA 187
+++A NFGCGSSREHAP AL G +++A SYA IFF NS G + + S+A
Sbjct: 74 YQGASVLLARENFGCGSSREHAPWALEEYGFRSIIAPSYADIFFNNSFKNGLLPIILSDA 133
Query: 188 RLCE-----ECSTGDVVTIEIAESRLINHTTGKEYKLK 220
+ E E + G + I++ E + + GK Y+ +
Sbjct: 134 EVDELFKQVEAAPGYQLQIDLHE-QTVTSPNGKVYRFE 170
>gi|434399342|ref|YP_007133346.1| 3-isopropylmalate dehydratase, small subunit [Stanieria
cyanosphaera PCC 7437]
gi|428270439|gb|AFZ36380.1| 3-isopropylmalate dehydratase, small subunit [Stanieria
cyanosphaera PCC 7437]
Length = 198
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 57/103 (55%), Gaps = 5/103 (4%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKIII 135
V+G++IDTD+IIPA +L V ++ LG A + + + I++
Sbjct: 14 VIGNDIDTDRIIPARFLRCV-----TFDGLGEQAFADDRIQAQGKHPFDLPQYQEANILV 68
Query: 136 AGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG 178
NFGCGSSREHAP AL G A+V ES+A IFF N VA G
Sbjct: 69 VNANFGCGSSREHAPQALARWGIQAIVGESFAEIFFGNCVAIG 111
>gi|410697877|gb|AFV76945.1| 3-isopropylmalate dehydratase, small subunit [Thermus oshimai JL-2]
Length = 163
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 83/170 (48%), Gaps = 16/170 (9%)
Query: 74 CYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKI 133
+ GD I+TD I+P +Y + ++ YA L + E I
Sbjct: 4 VFKFGDQINTDDILPGKYAPFMVGE----DRFHLYAFAHLRPGFA-------EEVRPGDI 52
Query: 134 IIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEEC 193
++ G N G GSSRE+AP AL G V+A+SYARIFFRN V G I P +SE + +
Sbjct: 53 LVFGRNTGLGSSREYAPEALKKLGIRVVIAKSYARIFFRNLVNLG-IVPFESEE-VVDAL 110
Query: 194 STGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARKTG 242
GD+V +++ R + G+ ++L+P L + G + Y +K G
Sbjct: 111 EDGDLVELDL--ERGVLQRGGERFQLRPPPPFLLEALKEGSLLEYYKKHG 158
>gi|422681337|ref|ZP_16739607.1| isopropylmalate isomerase small subunit [Pseudomonas syringae pv.
tabaci str. ATCC 11528]
gi|331010681|gb|EGH90737.1| isopropylmalate isomerase small subunit [Pseudomonas syringae pv.
tabaci str. ATCC 11528]
Length = 213
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 80/153 (52%), Gaps = 22/153 (14%)
Query: 80 NIDTDQIIPAEYLTLV------PSNPDEYEKLGSYALIGLPATYTTR------FIDENET 127
N+DTDQIIP ++L + P+ DE+ Y +G P ++ F+ +E
Sbjct: 18 NVDTDQIIPKQFLKSIKRTGFGPNLFDEWR----YRDVGQPYQDNSKRPLNHDFVLNHER 73
Query: 128 KTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEA 187
+++A NFGCGS REHAP AL G A++A SYA IFF NS G + + SEA
Sbjct: 74 YQGASVLLARENFGCGSRREHAPWALEEYGFCAIIAPSYADIFFNNSFKNGLLPIILSEA 133
Query: 188 RLCE-----ECSTGDVVTIEIAESRLINHTTGK 215
+ E E S G ++I++ +++ + GK
Sbjct: 134 EVDELFKQVEASPGYQLSIDL-QAQTVTRPDGK 165
>gi|261414482|ref|YP_003248165.1| 3-isopropylmalate dehydratase small subunit [Fibrobacter
succinogenes subsp. succinogenes S85]
gi|385789470|ref|YP_005820593.1| 3-isopropylmalate dehydratase small subunit [Fibrobacter
succinogenes subsp. succinogenes S85]
gi|261370938|gb|ACX73683.1| 3-isopropylmalate dehydratase, small subunit [Fibrobacter
succinogenes subsp. succinogenes S85]
gi|302325788|gb|ADL24989.1| 3-isopropylmalate dehydratase, small subunit [Fibrobacter
succinogenes subsp. succinogenes S85]
Length = 202
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/107 (44%), Positives = 62/107 (57%), Gaps = 10/107 (9%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYA----LIGLPATYTTRFIDENETKTKY 131
V G++IDTD+IIPA +L V +E LG+ A + GL A + K
Sbjct: 14 VRGNDIDTDRIIPARFLKCVT-----FEGLGANAFADDIAGLAAQGKVHPFRDPAYKNG- 67
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG 178
I+++ NFGCGSSREHAP AL G A++AESY+ IFF N VA G
Sbjct: 68 SILVSNQNFGCGSSREHAPQALKRWGIRAIIAESYSEIFFGNCVAIG 114
>gi|77458117|ref|YP_347622.1| isopropylmalate isomerase small subunit [Pseudomonas fluorescens
Pf0-1]
gi|77382120|gb|ABA73633.1| putative 3-isopropylmalate dehydratase small subunit [Pseudomonas
fluorescens Pf0-1]
Length = 214
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 81/158 (51%), Gaps = 22/158 (13%)
Query: 80 NIDTDQIIPAEYLTLV------PSNPDEYEKLGSYALIGLPATYTTR------FIDENET 127
N+DTDQIIP ++L + P+ DE+ Y +G P ++ F+ E
Sbjct: 18 NVDTDQIIPKQFLKSIKRTGFGPNLFDEWR----YLDVGQPYQDNSKRPLNKEFVLNAER 73
Query: 128 KTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEA 187
+++A NFGCGSSREHAP AL G +++A SYA IFF NS G + + S+A
Sbjct: 74 YQGASVLLARENFGCGSSREHAPWALEEYGFRSIIAPSYADIFFNNSFKNGLLPIILSDA 133
Query: 188 RLCE-----ECSTGDVVTIEIAESRLINHTTGKEYKLK 220
+ E E + G + I++ E + + GK Y+ +
Sbjct: 134 EVDELFKQVEAAPGYQLQIDLHE-QTVTSPNGKVYRFE 170
>gi|402221141|gb|EJU01211.1| hypothetical protein DACRYDRAFT_95366 [Dacryopinax sp. DJM-731 SS1]
Length = 758
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 66/128 (51%), Gaps = 5/128 (3%)
Query: 80 NIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKIIIAGGN 139
N+DTDQ++P EYL + + T F+ + K +I++A N
Sbjct: 552 NVDTDQVLPKEYLKKISKKGLAEGLFRPMRFDAMTGKEITDFVLNKDPWRKSQILVARYN 611
Query: 140 FGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPL---DSEARLC-EECST 195
FGCGSSREHAP AL G A +AESY IF+ NS G + P+ + LC ++ +
Sbjct: 612 FGCGSSREHAPWALQDFGFRAFIAESYGEIFYNNSTKNG-LLPVVLTKDQVELCIQDAAA 670
Query: 196 GDVVTIEI 203
G +T+++
Sbjct: 671 GKEITVDL 678
>gi|227499094|ref|ZP_03929231.1| 3-isopropylmalate dehydratase large subunit [Acidaminococcus sp.
D21]
gi|352684472|ref|YP_004896457.1| 3-isopropylmalate dehydratase large subunit [Acidaminococcus
intestini RyC-MR95]
gi|226904543|gb|EEH90461.1| 3-isopropylmalate dehydratase large subunit [Acidaminococcus sp.
D21]
gi|350279127|gb|AEQ22317.1| 3-isopropylmalate dehydratase large subunit [Acidaminococcus
intestini RyC-MR95]
Length = 598
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 87/169 (51%), Gaps = 23/169 (13%)
Query: 70 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT 129
F+G + GD+IDTD IIP + T +P+ E++ YA L + T +
Sbjct: 5 FNGKIWTFGDDIDTDTIIPGKRGT-IPT----IEEMKRYAFELLKPEFGTAVKPGD---- 55
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
I++AG NFGCGSSRE A L G ++A+S+ARIFFRN+ G I L + +
Sbjct: 56 ---ILVAGKNFGCGSSREQAATVLSHNGVRCIIAKSFARIFFRNAFNNG-IILLQCDG-I 110
Query: 190 CEECSTGDVVTIEIAESRLINHTTGKEYKLKPIG----DLGPVIDAGGI 234
E GD+VT++ L N T K P+G +L +++ GG+
Sbjct: 111 QEVVKGGDIVTVD-----LENKTVSANGKSFPVGAIPQNLLEIVEHGGL 154
>gi|289580580|ref|YP_003479046.1| 3-isopropylmalate dehydratase small subunit [Natrialba magadii ATCC
43099]
gi|448284243|ref|ZP_21475505.1| 3-isopropylmalate dehydratase small subunit [Natrialba magadii ATCC
43099]
gi|289530133|gb|ADD04484.1| 3-isopropylmalate dehydratase, small subunit [Natrialba magadii
ATCC 43099]
gi|445571325|gb|ELY25879.1| 3-isopropylmalate dehydratase small subunit [Natrialba magadii ATCC
43099]
Length = 223
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 62/112 (55%), Gaps = 20/112 (17%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETK------- 128
V G++IDTDQIIPA ++ +V ++ LG +A + RF ++++ K
Sbjct: 22 VRGNDIDTDQIIPARFMKVVT-----FDGLGEFAF------FDQRFTEDDDLKDHPFNED 70
Query: 129 --TKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG 178
+++ NFGCGSSREHAP AL G A++ ES+A IF N +A G
Sbjct: 71 QFQDSSVMVVNSNFGCGSSREHAPQALMRWGIDAIIGESFAEIFAGNCLALG 122
>gi|417917608|ref|ZP_12561167.1| 3-isopropylmalate dehydratase, small subunit [Streptococcus
parasanguinis SK236]
gi|342830245|gb|EGU64584.1| 3-isopropylmalate dehydratase, small subunit [Streptococcus
parasanguinis SK236]
Length = 196
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 83/169 (49%), Gaps = 36/169 (21%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENET-------- 127
++ DNIDTDQI+P ++L L+ + G Y + Y R++D+ +
Sbjct: 14 LMNDNIDTDQILPKQFLKLIDK-----KGFGKYLM------YAWRYLDDRYSEDPEFIFN 62
Query: 128 KTKYK---IIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGE---IY 181
K +Y+ I+I G NFG GSSREHA AL G V+A S+ I + N + G +
Sbjct: 63 KAEYRQATILITGDNFGAGSSREHAAWALADYGFKVVIAGSFGDIHYNNELNNGMLPIVQ 122
Query: 182 PLDSEARLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLGPVID 230
PL+ +L T D VT+++ E ++I+ P+G+ ID
Sbjct: 123 PLEVRHKLASLKPT-DEVTVDLEEQKIIS----------PVGEFSFEID 160
>gi|315613281|ref|ZP_07888190.1| 3-isopropylmalate dehydratase small subunit [Streptococcus
sanguinis ATCC 49296]
gi|315314516|gb|EFU62559.1| 3-isopropylmalate dehydratase small subunit [Streptococcus
sanguinis ATCC 49296]
Length = 197
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 75/148 (50%), Gaps = 26/148 (17%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT------ 129
++ DNIDTDQI+P ++L L+ + G Y + Y R++D+N T+
Sbjct: 14 LMNDNIDTDQILPKQFLKLIDK-----KGFGKYLM------YAWRYLDDNYTEDPDFVFN 62
Query: 130 -----KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGE---IY 181
K I+I+G NFG GSSREHA AL G V+A S+ I + N + G +
Sbjct: 63 RPEYRKASILISGDNFGAGSSREHAAWALADYGFKVVIAGSFGDIHYNNELNNGMLPIVQ 122
Query: 182 PLDSEARLCEECSTGDVVTIEIAESRLI 209
P + +L + D VT+++ + ++I
Sbjct: 123 PREVREKLA-QLKPIDQVTVDLEQQKII 149
>gi|225028796|ref|ZP_03717988.1| hypothetical protein EUBHAL_03075 [Eubacterium hallii DSM 3353]
gi|224953880|gb|EEG35089.1| isopropylmalate/citramalate isomerase small subunit [Eubacterium
hallii DSM 3353]
Length = 158
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 84/168 (50%), Gaps = 27/168 (16%)
Query: 79 DNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKIIIAGG 138
+++DTDQII ++YL L PD E + Y L + + +I+AG
Sbjct: 9 NDVDTDQIIASQYLLL----PD-IEAMKQYTFESLDPDFAKK-------AQPGDLIVAGE 56
Query: 139 NFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEECSTGDV 198
NFGCGSSRE AP L A G AV+A+S+ARIF+RNS+ G P+ L E G
Sbjct: 57 NFGCGSSREQAPSVLKALGIKAVIAKSFARIFYRNSINIG--LPVIVCKDLYEHVEDGGQ 114
Query: 199 VTIEIA------ESRLINHTTGKEYKLKPIGDLGPVIDAGGIFAYARK 240
++++ + ++ + T EY + +++AGG+ A K
Sbjct: 115 ADLDLSAGTVTVDGQVFSCTKLPEY-------MQNILNAGGLIASLNK 155
>gi|449997569|ref|ZP_21824052.1| isopropylmalate isomerase small subunit [Streptococcus mutans A9]
gi|449181777|gb|EMB83843.1| isopropylmalate isomerase small subunit [Streptococcus mutans A9]
Length = 196
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 82/170 (48%), Gaps = 36/170 (21%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT------ 129
++ DNIDTDQI+P ++L L+ + G Y + Y R++D N T+
Sbjct: 14 LMNDNIDTDQILPKQFLKLIDK-----KGFGKYLM------YEWRYLDNNYTENPDFIFN 62
Query: 130 --KYK---IIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG---EIY 181
+Y+ I+I G NFG GSSREHA AL G +VA S+ I + N + G I
Sbjct: 63 QPEYREASILITGDNFGAGSSREHAAWALADYGFKVIVAGSFGDIHYNNDLNNGILPIIQ 122
Query: 182 PLDSEARLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLGPVIDA 231
P + +L + ST D VT+ + E ++ + P+GD ID
Sbjct: 123 PKEVRDKLAKLKST-DEVTVNLFEQKIYS----------PVGDFSFDIDG 161
>gi|406829991|ref|ZP_11089585.1| isopropylmalate isomerase small subunit [Schlesneria paludicola DSM
18645]
Length = 197
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/100 (44%), Positives = 58/100 (58%), Gaps = 6/100 (6%)
Query: 79 DNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKIIIAGG 138
D+IDTD+IIPA +L V ++ LG +A + D+ K+ I++AG
Sbjct: 17 DDIDTDRIIPARFLRCVT-----FDGLGDHAFEDDRLQDKSHPFDDARFKSG-SILVAGR 70
Query: 139 NFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG 178
NFGCGSSREHAP AL G A++AES+A IFF N G
Sbjct: 71 NFGCGSSREHAPQALMRWGIRAIIAESFAEIFFGNCTTLG 110
>gi|417914914|ref|ZP_12558545.1| 3-isopropylmalate dehydratase, small subunit [Streptococcus mitis
bv. 2 str. SK95]
gi|342835665|gb|EGU69899.1| 3-isopropylmalate dehydratase, small subunit [Streptococcus mitis
bv. 2 str. SK95]
Length = 197
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 76/148 (51%), Gaps = 26/148 (17%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT------ 129
++ DNIDTDQI+P ++L L+ + + G Y + Y R++D+N T+
Sbjct: 14 LMNDNIDTDQILPKQFLKLI-----DKKGFGKYLM------YAWRYLDDNYTEDPDFVFN 62
Query: 130 -----KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGE---IY 181
K I+I+G NFG GSSREHA AL G V+A S+ I + N + G +
Sbjct: 63 RPEYRKASILISGDNFGAGSSREHAAWALADYGFKVVIAGSFGDIHYNNELNNGMLPIVQ 122
Query: 182 PLDSEARLCEECSTGDVVTIEIAESRLI 209
P + +L T D VT+++ + ++I
Sbjct: 123 PREVREKLANLQPT-DPVTVDLEQQKII 149
>gi|448323521|ref|ZP_21512979.1| 3-isopropylmalate dehydratase, small subunit [Natronococcus
amylolyticus DSM 10524]
gi|445599417|gb|ELY53450.1| 3-isopropylmalate dehydratase, small subunit [Natronococcus
amylolyticus DSM 10524]
Length = 213
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 63/113 (55%), Gaps = 22/113 (19%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY---- 131
+ G++IDTDQIIPA ++ +V ++ LG +A L RF DE++ + +
Sbjct: 22 IRGNDIDTDQIIPARFMKVVT-----FDGLGEFAFFDL------RF-DEDDNQKDHPFNE 69
Query: 132 ------KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG 178
+++ NFGCGSSREHAP AL G AV+ ES+A IF N +A G
Sbjct: 70 ERFQDSSVMVVNSNFGCGSSREHAPQALMRWGIDAVIGESFAEIFAGNCLALG 122
>gi|427413214|ref|ZP_18903406.1| 3-isopropylmalate dehydratase, small subunit [Veillonella ratti
ACS-216-V-Col6b]
gi|425716030|gb|EKU79016.1| 3-isopropylmalate dehydratase, small subunit [Veillonella ratti
ACS-216-V-Col6b]
Length = 165
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 59/107 (55%), Gaps = 12/107 (11%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + G+NIDTDQI P ++ L + + + + + G T+ + F
Sbjct: 7 GKVFTFGNNIDTDQIYPGRFVELT-----DLKDIVPHTMQGSDPTFASTF-------KAG 54
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG 178
I++ G NFGCGSSREHA + L G AV+AES+ARIF+RN + G
Sbjct: 55 DIVVGGTNFGCGSSREHAAICLKGIGAGAVIAESFARIFYRNGINLG 101
>gi|126695616|ref|YP_001090502.1| 3-isopropylmalate dehydratase small subunit [Prochlorococcus
marinus str. MIT 9301]
gi|126542659|gb|ABO16901.1| 3-isopropylmalate dehydratase small subunit [Prochlorococcus
marinus str. MIT 9301]
Length = 212
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 57/103 (55%), Gaps = 5/103 (4%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKIII 135
++GD+IDTD+IIPA +L V ++ LG + + E+ I+I
Sbjct: 22 LIGDDIDTDRIIPARFLKCV-----NFDNLGQSVFEDDRKNLKGKHPFDLESNKGSSILI 76
Query: 136 AGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG 178
NFGCGSSREHAP AL G A++ ES+A IF+ N +A G
Sbjct: 77 VNSNFGCGSSREHAPQALLRWGIRAIIGESFAEIFYCNCIAIG 119
>gi|296331628|ref|ZP_06874097.1| isopropylmalate isomerase small subunit [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305675413|ref|YP_003867085.1| 3-isopropylmalate dehydratase small subunit [Bacillus subtilis
subsp. spizizenii str. W23]
gi|296151223|gb|EFG92103.1| isopropylmalate isomerase small subunit [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305413657|gb|ADM38776.1| 3-isopropylmalate dehydratase (small subunit) [Bacillus subtilis
subsp. spizizenii str. W23]
Length = 199
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 81/166 (48%), Gaps = 25/166 (15%)
Query: 65 EPTATFHGLCYVVGD-NIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFID 123
EP T G V+ N+DTDQIIP ++L + E+ G G A + R+ +
Sbjct: 2 EPLKTHTGKAAVLNRINVDTDQIIPKQFLKRI-------ERTG----YGRFAFFDWRYDE 50
Query: 124 ENETKTKYK----------IIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRN 173
+ E +++ I+IAG NFGCGSSREHAP AL G ++A S+A IF +N
Sbjct: 51 KGEPNPEFELNQPAYQGASILIAGENFGCGSSREHAPWALDDYGFKIIIAPSFADIFHQN 110
Query: 174 SVATGEI---YPLDSEARLCEECSTGDVVTIEIAESRLINHTTGKE 216
G + P D+ +L + + E++LI+ + G +
Sbjct: 111 CFKNGMLPIRMPYDNWKKLVGQYENQSLQMTVDLENQLIHESEGNQ 156
>gi|126172641|ref|YP_001048790.1| isopropylmalate isomerase small subunit [Shewanella baltica OS155]
gi|386339416|ref|YP_006035782.1| 3-isopropylmalate dehydratase small subunit [Shewanella baltica
OS117]
gi|166990778|sp|A3CZK8.1|LEUD_SHEB5 RecName: Full=3-isopropylmalate dehydratase small subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|125995846|gb|ABN59921.1| 3-isopropylmalate dehydratase, small subunit [Shewanella baltica
OS155]
gi|334861817|gb|AEH12288.1| 3-isopropylmalate dehydratase, small subunit [Shewanella baltica
OS117]
Length = 201
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 70/127 (55%), Gaps = 24/127 (18%)
Query: 65 EPTATFHGLCYVVGD-NIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFID 123
+P T GL ++ NIDTDQIIP ++L+ V + G+ + R++D
Sbjct: 2 QPFTTHTGLAVMIDSTNIDTDQIIPKQFLSKVTRDG-----------FGVHLFHDWRYLD 50
Query: 124 E---------NETKTKYK---IIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFF 171
+ + +++Y+ I++A NFGCGSSREHAP AL G A++A+S+A IF+
Sbjct: 51 DAGDQPNPEFSLNQSRYRGASILLAQENFGCGSSREHAPWALADFGLRAIIAQSFADIFY 110
Query: 172 RNSVATG 178
NS+ G
Sbjct: 111 GNSINNG 117
>gi|404329759|ref|ZP_10970207.1| isopropylmalate isomerase small subunit [Sporolactobacillus vineae
DSM 21990 = SL153]
Length = 192
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/126 (39%), Positives = 65/126 (51%), Gaps = 24/126 (19%)
Query: 65 EPTATFHGL-CYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFID 123
+P TF GL C + N+DTDQIIP ++L V E + G + Y RF D
Sbjct: 2 QPFNTFEGLVCPIDRINVDTDQIIPKQFLKRV-----ERQGFGQFLF------YNWRF-D 49
Query: 124 ENETKT--------KYK---IIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFR 172
++ K KYK I++A NFGCGSSREHAP AL G ++A S+A IF+
Sbjct: 50 QDGKKNPDFILNQPKYKGASILVARDNFGCGSSREHAPWALQDYGFKVIIAPSFADIFYN 109
Query: 173 NSVATG 178
N G
Sbjct: 110 NCQKNG 115
>gi|414155448|ref|ZP_11411760.1| 3-isopropylmalate dehydratase small subunit [Streptococcus sp.
F0442]
gi|410873421|gb|EKS21356.1| 3-isopropylmalate dehydratase small subunit [Streptococcus sp.
F0442]
Length = 197
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 76/148 (51%), Gaps = 26/148 (17%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENET-------- 127
++ DNIDTDQI+P ++L L+ + + G Y + Y R++D T
Sbjct: 14 LMNDNIDTDQILPKQFLKLI-----DKKGFGKYLM------YAWRYLDNQYTEDPDFIFN 62
Query: 128 KTKYK---IIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGE---IY 181
K +Y+ I+I G NFG GSSREHA AL G V+A S+ I + N + G +
Sbjct: 63 KPEYRQATILITGDNFGAGSSREHAAWALADYGFKVVIAGSFGDIHYNNELNNGMLPIVQ 122
Query: 182 PLDSEARLCEECSTGDVVTIEIAESRLI 209
PL+ +L T D VT+++ E ++I
Sbjct: 123 PLEVRQKLASLKPT-DPVTVDLEEQKII 149
>gi|448359297|ref|ZP_21547958.1| 3-isopropylmalate dehydratase small subunit [Natrialba
chahannaoensis JCM 10990]
gi|445643695|gb|ELY96733.1| 3-isopropylmalate dehydratase small subunit [Natrialba
chahannaoensis JCM 10990]
Length = 221
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 62/112 (55%), Gaps = 20/112 (17%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETK------- 128
+ G++IDTDQIIPA ++ +V ++ LG +A + RF ++++ K
Sbjct: 22 IRGNDIDTDQIIPARFMKVVT-----FDGLGEFAF------FDQRFTEDDDLKDHPFNED 70
Query: 129 --TKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG 178
+++ NFGCGSSREHAP AL G A++ ES+A IF N +A G
Sbjct: 71 QFQDSSVMVVNSNFGCGSSREHAPQALMRWGIDAIIGESFAEIFAGNCLALG 122
>gi|385830752|ref|YP_005868565.1| 3-isopropylmalate/R-2-methylmalate dehydratase small subunit
[Lactococcus lactis subsp. lactis CV56]
gi|326406760|gb|ADZ63831.1| 3-isopropylmalate/R-2-methylmalate dehydratase small subunit
[Lactococcus lactis subsp. lactis CV56]
Length = 191
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 82/160 (51%), Gaps = 25/160 (15%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFI---DENE----TK 128
V+ DNIDTDQIIP ++L + +K G G Y R++ DEN
Sbjct: 14 VMNDNIDTDQIIPKQFLKAI-------DKKG----FGKNLFYEWRYLKDYDENPDFILNA 62
Query: 129 TKYK---IIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDS 185
KYK ++I+G NFG GSSREHA AL G A++A SY+ IF+ N++ G + P+
Sbjct: 63 PKYKKASLLISGDNFGSGSSREHAEWALSDYGFRAIIAGSYSDIFYNNALKNG-LLPIKQ 121
Query: 186 EARLCEE---CSTGDVVTIEIAESRLINHTTGKEYKLKPI 222
+ + S+ + +TI++ +I +++ PI
Sbjct: 122 PREVLNQLTKLSSQEEITIDLPHQLIITSLGDFHFEIDPI 161
>gi|374581396|ref|ZP_09654490.1| LOW QUALITY PROTEIN: 3-isopropylmalate dehydratase, small subunit
[Desulfosporosinus youngiae DSM 17734]
gi|374417478|gb|EHQ89913.1| LOW QUALITY PROTEIN: 3-isopropylmalate dehydratase, small subunit
[Desulfosporosinus youngiae DSM 17734]
Length = 174
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 90/170 (52%), Gaps = 19/170 (11%)
Query: 80 NIDTDQIIPAEYLTLVPSNPDEYEKLGSYAL--IGLPATYTTRFIDENETKTKYKIIIAG 137
+I+TD+IIPA+YLT + E L Y L + LP F ++++ K K +++
Sbjct: 15 DINTDEIIPAKYLTEITK-----EALKPYLLEDLSLP-----DFNNKDDIKGK-AVLVTR 63
Query: 138 GNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEI---YPLDSEARLCEECS 194
NFGCGSSREHAP AL G + V+AES+ARIF +N G P + L E +
Sbjct: 64 ANFGCGSSREHAPWALEVNGINVVIAESFARIFRQNMYNCGMFAIELPTEKIDYLFENYA 123
Query: 195 TGDV-VTIEIAESRLINHTTGKEYKLK-PIGDLGP-VIDAGGIFAYARKT 241
D +TI+I ++I +T + ++ +G+ ++ GG YA K
Sbjct: 124 GKDTSLTIDIENDKIIVVSTDQSEEIDFNVGEFDKTLVKEGGWVGYADKN 173
>gi|188990262|ref|YP_001902272.1| isopropylmalate isomerase small subunit [Xanthomonas campestris pv.
campestris str. B100]
gi|167732022|emb|CAP50210.1| 3-isopropylmalate dehydratase, small subunit [Xanthomonas
campestris pv. campestris]
Length = 249
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/158 (36%), Positives = 86/158 (54%), Gaps = 22/158 (13%)
Query: 80 NIDTDQIIPAEYLTLV------PSNPDEYEKLGSYALIGLPA-TYTTRFIDENETKT--K 130
N+DTDQIIP ++L + P+ DE+ Y IG P +TR +++ +
Sbjct: 52 NVDTDQIIPKQFLKSIKRTGFGPNLFDEWR----YLDIGEPGRDNSTRPLNQEFVLNFPR 107
Query: 131 YK---IIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEA 187
Y+ +++A NFGCGSSREHAP AL G AV+A S+A IF+ NS G + + +EA
Sbjct: 108 YQGASVLLARENFGCGSSREHAPWALDEYGFRAVIAPSFADIFYNNSFKNGLLPIVLAEA 167
Query: 188 R---LCEEC--STGDVVTIEIAESRLINHTTGKEYKLK 220
L E+C + G +T+++A R + G EY +
Sbjct: 168 EMDALFEQCLGNEGYQLTVDLAAQR-VRRPDGVEYAFE 204
>gi|448353400|ref|ZP_21542176.1| 3-isopropylmalate dehydratase small subunit [Natrialba
hulunbeirensis JCM 10989]
gi|445640260|gb|ELY93349.1| 3-isopropylmalate dehydratase small subunit [Natrialba
hulunbeirensis JCM 10989]
Length = 221
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 62/112 (55%), Gaps = 20/112 (17%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETK------- 128
V G++IDTDQIIPA ++ +V ++ LG +A + RF ++++ K
Sbjct: 22 VRGNDIDTDQIIPARFMKVVT-----FDGLGEFAF------FDQRFTEDDDLKDHPFNED 70
Query: 129 --TKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG 178
+++ NFGCGSSREHAP AL G A++ ES+A IF N +A G
Sbjct: 71 RFQDSSVMVVNSNFGCGSSREHAPQALLRWGIDAIIGESFAEIFAGNCLALG 122
>gi|289168055|ref|YP_003446324.1| 3-isopropylmalate dehydratase small subunit [Streptococcus mitis
B6]
gi|288907622|emb|CBJ22459.1| 3-isopropylmalate dehydratase small subunit [Streptococcus mitis
B6]
Length = 197
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 82/170 (48%), Gaps = 36/170 (21%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT------ 129
++ DNIDTDQI+P ++L L+ + G Y + Y R++D+ T+
Sbjct: 14 LMNDNIDTDQILPKQFLKLIDK-----KGFGKYLM------YAWRYLDDKYTEDPDFVFN 62
Query: 130 -----KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGE---IY 181
K I+I+G NFG GSSREHA AL G V+A S+ I + N + G +
Sbjct: 63 RPEYRKASILISGDNFGAGSSREHAAWALADYGFKVVIAGSFGDIHYNNELNNGMLPIVQ 122
Query: 182 PLDSEARLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLGPVIDA 231
P + +L + D VT+++ + ++I+ PIG+ ID+
Sbjct: 123 PREVREKLA-QLQPSDQVTVDLEQQKIIS----------PIGEFTFEIDS 161
>gi|397780882|ref|YP_006545355.1| 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit
[Methanoculleus bourgensis MS2]
gi|396939384|emb|CCJ36639.1| 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit
[Methanoculleus bourgensis MS2]
Length = 157
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 82/164 (50%), Gaps = 20/164 (12%)
Query: 77 VGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKIIIA 136
+G+++DTDQII YL + + L L T R + +I+A
Sbjct: 10 LGNDVDTDQIIAGRYL-----RTKDRSVWAEHVLEDLDPTLAGRI--------RGAVIVA 56
Query: 137 GGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEECSTG 196
G N GCGSSRE A VAL AG VVA S+ARIFFRN+V G P+ EA + C+ G
Sbjct: 57 GRNMGCGSSREQAVVALREAGVVGVVAPSFARIFFRNAVNVG--LPV-IEAPV-SSCTDG 112
Query: 197 DVVTIEIAESRLINHTTGKEYKLKPI-GDLGPVIDAGGIFAYAR 239
V ++ E + G+ Y +P+ + ++ AGG+ Y R
Sbjct: 113 AHVAFDLDEGWV--EVDGERYPARPLSAKMVAILRAGGLVPYWR 154
>gi|417938072|ref|ZP_12581370.1| 3-isopropylmalate dehydratase, small subunit [Streptococcus
infantis SK970]
gi|343391162|gb|EGV03737.1| 3-isopropylmalate dehydratase, small subunit [Streptococcus
infantis SK970]
Length = 197
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 79/164 (48%), Gaps = 14/164 (8%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTR--FIDENETKTKYKI 133
++ DNIDTDQI+P ++L L+ + K YA L YT F+ K I
Sbjct: 14 LMNDNIDTDQILPKQFLKLIDKKG--FGKFLMYAWRYLDDKYTEDPDFVFNRPEYRKATI 71
Query: 134 IIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGE---IYPLDSEARLC 190
+I G NFG GSSREHA AL G V+A S+ I + N + G + P + +L
Sbjct: 72 LITGDNFGAGSSREHAAWALADYGFKVVIAGSFGDIHYNNELNNGMLPIVQPREVREKLA 131
Query: 191 EECSTGDVVTIEIAESRLI------NHTTGKEYKLKPIGDLGPV 228
+ T D VT+++ + ++I N E+K K + L +
Sbjct: 132 QLQPT-DQVTVDLEQQKIISPVGEFNFEIDSEWKHKLLNGLDDI 174
>gi|417934030|ref|ZP_12577350.1| 3-isopropylmalate dehydratase, small subunit [Streptococcus mitis
bv. 2 str. F0392]
gi|340770600|gb|EGR93115.1| 3-isopropylmalate dehydratase, small subunit [Streptococcus mitis
bv. 2 str. F0392]
Length = 197
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 83/170 (48%), Gaps = 36/170 (21%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT------ 129
++ DNIDTDQI+P ++L L+ + G Y + Y R++D+N T+
Sbjct: 14 LMNDNIDTDQILPKQFLKLIDK-----KGFGKYLM------YAWRYLDDNYTENPDFVFN 62
Query: 130 -----KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGE---IY 181
K I+I+G NFG GSSREHA AL G V+A S+ I + N + G +
Sbjct: 63 RPEYRKASILISGDNFGAGSSREHAAWALADYGFKVVIAGSFGDIHYNNELNNGMLPIVQ 122
Query: 182 PLDSEARLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLGPVIDA 231
P + +L + T D VT+++ + +I+ P+G+ ID+
Sbjct: 123 PKEVREKLAQLKPT-DQVTVDLEQQIIIS----------PVGEFSFEIDS 161
>gi|270292623|ref|ZP_06198834.1| 3-isopropylmalate dehydratase, small subunit [Streptococcus sp.
M143]
gi|270278602|gb|EFA24448.1| 3-isopropylmalate dehydratase, small subunit [Streptococcus sp.
M143]
Length = 197
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 83/170 (48%), Gaps = 36/170 (21%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT------ 129
++ DNIDTDQI+P ++L L+ + G Y + Y R++D+N +
Sbjct: 14 LMNDNIDTDQILPKQFLKLIDK-----KGFGKYLM------YAWRYLDDNYIEDPDFVFN 62
Query: 130 -----KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGE---IY 181
K I+I+G NFG GSSREHA AL G V+A S+ I + N + G +
Sbjct: 63 RPEYRKASILISGDNFGAGSSREHAAWALADYGFKVVIAGSFGDIHYNNELNNGMLPIVQ 122
Query: 182 PLDSEARLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLGPVIDA 231
P + +L + T D VT+++ + ++I+ P+G+ ID+
Sbjct: 123 PREVREKLAQLKPT-DQVTVDLEQQKIIS----------PVGEFSFEIDS 161
>gi|186680707|ref|YP_001863903.1| isopropylmalate isomerase small subunit [Nostoc punctiforme PCC
73102]
gi|186463159|gb|ACC78960.1| 3-isopropylmalate dehydratase, small subunit [Nostoc punctiforme
PCC 73102]
Length = 202
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 56/103 (54%), Gaps = 5/103 (4%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKIII 135
+VG++IDTD+IIPA YL V ++ LG A I + I+I
Sbjct: 15 LVGNDIDTDRIIPARYLKAV-----TFDGLGEGAFIDDRTALKGEHPFDQPQYQGANILI 69
Query: 136 AGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG 178
NFGCGSSREHAP A+ G A++ ES+A IFF N VA G
Sbjct: 70 VNRNFGCGSSREHAPQAIAKWGIQALIGESFAEIFFGNCVAMG 112
>gi|428202210|ref|YP_007080799.1| 3-isopropylmalate dehydratase small subunit [Pleurocapsa sp. PCC
7327]
gi|427979642|gb|AFY77242.1| 3-isopropylmalate dehydratase, small subunit [Pleurocapsa sp. PCC
7327]
Length = 197
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 58/103 (56%), Gaps = 5/103 (4%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKIII 135
+VGD+IDTD+IIPA +L V ++ LG+ A + + + I++
Sbjct: 14 LVGDDIDTDRIIPARFLRCV-----TFDGLGAQVFADDRAQASGQHPFDLPQYQGANILV 68
Query: 136 AGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG 178
NFGCGSSREHAP A+ G A+V ES+A IFF N VA G
Sbjct: 69 VNANFGCGSSREHAPQAIIKWGIQAIVGESFAEIFFGNCVANG 111
>gi|432328932|ref|YP_007247076.1| 3-isopropylmalate dehydratase, small subunit [Aciduliprofundum sp.
MAR08-339]
gi|432135641|gb|AGB04910.1| 3-isopropylmalate dehydratase, small subunit [Aciduliprofundum sp.
MAR08-339]
Length = 168
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 83/172 (48%), Gaps = 16/172 (9%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + GD+I TD I P Y L + P+ L + L + +
Sbjct: 7 GRVWKFGDDISTDHIAPGRYFHLRTNLPE----LAKHVLEDADPEFPKKV-------KPG 55
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
II+AG NFG GSSREHAP + AG S V+A+S+ARIF+RN+ G PL +
Sbjct: 56 DIIVAGNNFGLGSSREHAPRIIKLAGVSCVIAKSFARIFYRNAFNIG--LPL--LVADTD 111
Query: 192 ECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARKTG 242
+ GD + I++ + + T G E + PI + +++ GGI + K G
Sbjct: 112 KIDEGDELEIDLENGVIKDLTKGIELQSTPIPPFMMRLLEDGGIVEHIMKHG 163
>gi|374673218|dbj|BAL51109.1| 3-isopropylmalate dehydratase small subunit [Lactococcus lactis
subsp. lactis IO-1]
Length = 191
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 82/160 (51%), Gaps = 25/160 (15%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFI---DENE----TK 128
V+ DNIDTDQIIP ++L + +K G G Y R++ DEN
Sbjct: 14 VMNDNIDTDQIIPKQFLKAI-------DKKG----FGKNLFYEWRYLKDYDENPDFILNA 62
Query: 129 TKYK---IIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDS 185
KYK ++I+G NFG GSSREHA AL G A++A SY+ IF+ N++ G + P+
Sbjct: 63 PKYKKASLLISGDNFGSGSSREHAAWALSDYGFRAIIAGSYSDIFYNNALKNG-LLPIKQ 121
Query: 186 EARLCEE---CSTGDVVTIEIAESRLINHTTGKEYKLKPI 222
+ + S+ + +TI++ +I +++ PI
Sbjct: 122 PREVLNQLTKLSSQEEITIDLPHQLIITSLGDFHFEIDPI 161
>gi|325922056|ref|ZP_08183854.1| 3-isopropylmalate dehydratase, small subunit [Xanthomonas gardneri
ATCC 19865]
gi|325547466|gb|EGD18522.1| 3-isopropylmalate dehydratase, small subunit [Xanthomonas gardneri
ATCC 19865]
Length = 215
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 81/158 (51%), Gaps = 22/158 (13%)
Query: 80 NIDTDQIIPAEYLTLV------PSNPDEYEKLGSYALIGLPATYTTR------FIDENET 127
N+DTDQIIP ++L + P+ DE+ Y IG P ++ F+
Sbjct: 18 NVDTDQIIPKQFLKSIKRTGFGPNLFDEWR----YLDIGEPGRDNSQRPINPEFVLNFPR 73
Query: 128 KTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEA 187
+++A NFGCGSSREHAP AL G AV+A S+A IFF NS G + + +EA
Sbjct: 74 YQGASVLLARENFGCGSSREHAPWALDEYGFRAVIAPSFADIFFNNSFKNGLLPIVLAEA 133
Query: 188 R---LCEEC--STGDVVTIEIAESRLINHTTGKEYKLK 220
L +C + G +T+++A R + + G EY +
Sbjct: 134 EVDALFAQCLATEGYQLTVDLAAQR-VRRSDGVEYSFE 170
>gi|435848021|ref|YP_007310271.1| 3-isopropylmalate dehydratase, small subunit [Natronococcus
occultus SP4]
gi|433674289|gb|AGB38481.1| 3-isopropylmalate dehydratase, small subunit [Natronococcus
occultus SP4]
Length = 260
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 62/112 (55%), Gaps = 20/112 (17%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETK------- 128
+ G++IDTDQIIPA ++ +V ++ LG +A + RF ++++ K
Sbjct: 69 IRGNDIDTDQIIPARFMKVVT-----FDGLGEFAF------FDQRFDEDDDQKDHPFNEE 117
Query: 129 --TKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG 178
+++ NFGCGSSREHAP AL G A++ ES+A IF N +A G
Sbjct: 118 RFQDSSVMVVNSNFGCGSSREHAPQALMRWGIDAIIGESFAEIFAGNCLALG 169
>gi|428770602|ref|YP_007162392.1| 3-isopropylmalate dehydratase small subunit [Cyanobacterium
aponinum PCC 10605]
gi|428684881|gb|AFZ54348.1| 3-isopropylmalate dehydratase, small subunit [Cyanobacterium
aponinum PCC 10605]
Length = 195
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 57/103 (55%), Gaps = 5/103 (4%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKIII 135
+VG++IDTD+IIPA +L V ++ LG + + KI++
Sbjct: 14 LVGNDIDTDRIIPARFLRCVT-----FDGLGEQVFADDRKALNGQHPFDLPQYQNAKILV 68
Query: 136 AGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG 178
GNFGCGSSREHAP A+ G A++ ES+A IFF N +A G
Sbjct: 69 VNGNFGCGSSREHAPQAIARWGIDAIIGESFAEIFFGNCLAMG 111
>gi|350266999|ref|YP_004878306.1| 3-isopropylmalate dehydratase small subunit [Bacillus subtilis
subsp. spizizenii TU-B-10]
gi|349599886|gb|AEP87674.1| 3-isopropylmalate dehydratase, small subunit [Bacillus subtilis
subsp. spizizenii TU-B-10]
Length = 199
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 81/166 (48%), Gaps = 25/166 (15%)
Query: 65 EPTATFHGLCYVVGD-NIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFID 123
EP T G V+ N+DTDQIIP ++L + E+ G G A + R+ +
Sbjct: 2 EPLKTHTGKAAVLNRINVDTDQIIPKQFLKRI-------ERTG----YGRFAFFDWRYDE 50
Query: 124 ENETKTKYK----------IIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRN 173
+ E +++ I+IAG NFGCGSSREHAP AL G ++A S+A IF +N
Sbjct: 51 KGEPNPEFELNQPAYQGASILIAGENFGCGSSREHAPWALDDYGFKIIIAPSFADIFHQN 110
Query: 174 SVATGEI---YPLDSEARLCEECSTGDVVTIEIAESRLINHTTGKE 216
G + P D+ +L + + E++LI+ + G +
Sbjct: 111 CFKNGMLPIRMPYDNWKKLVGQYENQSLQMTVDLENQLIHDSEGNQ 156
>gi|15673203|ref|NP_267377.1| isopropylmalate isomerase small subunit [Lactococcus lactis subsp.
lactis Il1403]
gi|281491725|ref|YP_003353705.1| 3-isopropylmalate dehydratase small subunit [Lactococcus lactis
subsp. lactis KF147]
gi|418038198|ref|ZP_12676539.1| 3-isopropylmalate dehydratase [Lactococcus lactis subsp. cremoris
CNCM I-1631]
gi|400187|sp|Q02144.1|LEUD_LACLA RecName: Full=3-isopropylmalate dehydratase small subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|12724191|gb|AAK05319.1|AE006354_4 3-isopropylmalate dehydratase small subunit [Lactococcus lactis
subsp. lactis Il1403]
gi|2565154|gb|AAB81916.1| LeuD [Lactococcus lactis subsp. lactis NCDO 2118]
gi|281375439|gb|ADA64949.1| 3-isopropylmalate dehydratase, small subunit [Lactococcus lactis
subsp. lactis KF147]
gi|354693620|gb|EHE93370.1| 3-isopropylmalate dehydratase [Lactococcus lactis subsp. cremoris
CNCM I-1631]
Length = 191
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 82/160 (51%), Gaps = 25/160 (15%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFI---DENE----TK 128
V+ DNIDTDQIIP ++L + +K G G Y R++ DEN
Sbjct: 14 VMNDNIDTDQIIPKQFLKAI-------DKKG----FGKNLFYEWRYLKDYDENPDFILNA 62
Query: 129 TKYK---IIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDS 185
KYK ++I+G NFG GSSREHA AL G A++A SY+ IF+ N++ G + P+
Sbjct: 63 PKYKKASLLISGDNFGSGSSREHAAWALSDYGFRAIIAGSYSDIFYNNALKNG-LLPIKQ 121
Query: 186 EARLCEE---CSTGDVVTIEIAESRLINHTTGKEYKLKPI 222
+ + S+ + +TI++ +I +++ PI
Sbjct: 122 PREVLNQLTKLSSQEEITIDLPHQLIITSLGDFHFEIDPI 161
>gi|398971337|ref|ZP_10683575.1| 3-isopropylmalate dehydratase, small subunit [Pseudomonas sp. GM30]
gi|398139040|gb|EJM28047.1| 3-isopropylmalate dehydratase, small subunit [Pseudomonas sp. GM30]
Length = 214
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 80/158 (50%), Gaps = 22/158 (13%)
Query: 80 NIDTDQIIPAEYLTLV------PSNPDEYEKLGSYALIGLPATYTTR------FIDENET 127
N+DTDQIIP ++L + P+ DE+ Y +G P ++ F+ E
Sbjct: 18 NVDTDQIIPKQFLKSIKRTGFGPNLFDEWR----YLDVGQPYQDNSKRPLNKEFVLNAER 73
Query: 128 KTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEA 187
+++A NFGCGSSREHAP AL G +++A SYA IFF NS G + + S+A
Sbjct: 74 YQGASVLLARENFGCGSSREHAPWALEEYGFRSIIAPSYADIFFNNSFKNGLLPIILSDA 133
Query: 188 RLCE-----ECSTGDVVTIEIAESRLINHTTGKEYKLK 220
+ E E G + I++ E + + GK Y+ +
Sbjct: 134 EVDELFKQVEAEPGYQLQIDLHE-QTVTSPNGKVYRFE 170
>gi|373107478|ref|ZP_09521777.1| 3-isopropylmalate dehydratase, small subunit [Stomatobaculum
longum]
gi|371651308|gb|EHO16742.1| 3-isopropylmalate dehydratase, small subunit [Stomatobaculum
longum]
Length = 158
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 86/166 (51%), Gaps = 17/166 (10%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + G ++DTDQII ++YL L PS E++ + L + + +
Sbjct: 2 GKIFCFGSDVDTDQIIASQYL-LYPS----VEEMAPHCFESLDENFAS-------AVREG 49
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
++A NFGCGSSRE AP L A G AV A S+ARIFFRN++ G P+ L +
Sbjct: 50 DFVVARDNFGCGSSREQAPAVLKALGVRAVFANSFARIFFRNAINIG--LPVIVCEGLID 107
Query: 192 ECSTGDVVTIEIAESRL-INHTTGKEYKLKPIGDLGPVIDAGGIFA 236
+ G+ +++++ + +N + + KL P + ++D GG+ A
Sbjct: 108 KVKPGEELSLDMESGTVCVNGQSYRCTKLPP--KMQAILDQGGLIA 151
>gi|448718165|ref|ZP_21702981.1| 3-isopropylmalate dehydratase small subunit [Halobiforma
nitratireducens JCM 10879]
gi|445784553|gb|EMA35362.1| 3-isopropylmalate dehydratase small subunit [Halobiforma
nitratireducens JCM 10879]
Length = 215
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 62/112 (55%), Gaps = 20/112 (17%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETK------- 128
+ G++IDTDQIIPA ++ +V ++ LG +A + RF ++++ K
Sbjct: 23 IQGNDIDTDQIIPARFMKVVT-----FDGLGEFAF------FDQRFTEDDDLKAHPMNED 71
Query: 129 --TKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG 178
I++ NFGCGSSREHAP AL G A++ ES+A IF N +A G
Sbjct: 72 RFQDSSIMVVNSNFGCGSSREHAPQALLRWGIDALIGESFAEIFAGNCLALG 123
>gi|417849333|ref|ZP_12495254.1| 3-isopropylmalate dehydratase, small subunit [Streptococcus mitis
SK1080]
gi|339456211|gb|EGP68803.1| 3-isopropylmalate dehydratase, small subunit [Streptococcus mitis
SK1080]
Length = 197
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 82/170 (48%), Gaps = 36/170 (21%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT------ 129
++ DNIDTDQI+P ++L L+ + G Y + Y R++D+ T+
Sbjct: 14 LMNDNIDTDQILPKQFLKLIDK-----KGFGKYLM------YAWRYLDDKYTEDPDFVFN 62
Query: 130 -----KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGE---IY 181
K I+I+G NFG GSSREHA AL G V+A S+ I + N + G +
Sbjct: 63 RPEYRKASILISGNNFGAGSSREHAAWALADYGFKVVIAGSFGDIHYNNELNNGMLPIVQ 122
Query: 182 PLDSEARLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLGPVIDA 231
P + +L + D VT+++ + ++I+ P+G+ ID+
Sbjct: 123 PREVREKLA-QLQPSDQVTVDLEQQKIIS----------PVGEFTFEIDS 161
>gi|448369143|ref|ZP_21555910.1| 3-isopropylmalate dehydratase small subunit [Natrialba aegyptia DSM
13077]
gi|445651686|gb|ELZ04594.1| 3-isopropylmalate dehydratase small subunit [Natrialba aegyptia DSM
13077]
Length = 213
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 62/112 (55%), Gaps = 20/112 (17%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETK------- 128
+ G++IDTDQIIPA ++ +V ++ LG +A + RF ++++ K
Sbjct: 22 IRGNDIDTDQIIPARFMKVVT-----FDGLGEFAF------FDKRFTEDDDLKDHPFNED 70
Query: 129 --TKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG 178
+++ NFGCGSSREHAP AL G A++ ES+A IF N +A G
Sbjct: 71 RFQDSSVMVVNSNFGCGSSREHAPQALMRWGIDAIIGESFAEIFAGNCLALG 122
>gi|448348911|ref|ZP_21537759.1| 3-isopropylmalate dehydratase small subunit [Natrialba taiwanensis
DSM 12281]
gi|445642572|gb|ELY95640.1| 3-isopropylmalate dehydratase small subunit [Natrialba taiwanensis
DSM 12281]
Length = 213
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 62/112 (55%), Gaps = 20/112 (17%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETK------- 128
+ G++IDTDQIIPA ++ +V ++ LG +A + RF ++++ K
Sbjct: 22 IRGNDIDTDQIIPARFMKVVT-----FDGLGEFAF------FDKRFTEDDDLKDHPFNED 70
Query: 129 --TKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG 178
+++ NFGCGSSREHAP AL G A++ ES+A IF N +A G
Sbjct: 71 RFQNSSVMVVNSNFGCGSSREHAPQALMRWGIDAIIGESFAEIFAGNCLALG 122
>gi|307704933|ref|ZP_07641824.1| 3-isopropylmalate dehydratase small subunit [Streptococcus mitis
SK597]
gi|307621547|gb|EFO00593.1| 3-isopropylmalate dehydratase small subunit [Streptococcus mitis
SK597]
Length = 197
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 82/170 (48%), Gaps = 36/170 (21%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT------ 129
++ DNIDTDQI+P ++L L+ + G Y + Y R++D+ T+
Sbjct: 14 LMNDNIDTDQILPKQFLKLIDK-----KGFGKYLM------YAWRYLDDKYTEDPGFVFN 62
Query: 130 -----KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGE---IY 181
K I+I+G NFG GSSREHA AL G V+A S+ I + N + G +
Sbjct: 63 RPEYRKATILISGDNFGAGSSREHAAWALADYGFKVVIAGSFGDIHYNNELNNGMLPIVQ 122
Query: 182 PLDSEARLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLGPVIDA 231
P + +L + D VT+++ + ++I+ PIG+ ID+
Sbjct: 123 PREVREKLA-QLQPSDQVTVDLEQQKIIS----------PIGEFTFEIDS 161
>gi|149909900|ref|ZP_01898550.1| 3-isopropylmalate dehydratase small subunit [Moritella sp. PE36]
gi|149807065|gb|EDM67023.1| 3-isopropylmalate dehydratase small subunit [Moritella sp. PE36]
Length = 206
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 62/114 (54%), Gaps = 22/114 (19%)
Query: 80 NIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY-------- 131
N+DTDQIIP ++L V E+ G G+ + RF+D+ K+
Sbjct: 18 NVDTDQIIPKQFLKKV-------ERTG----FGIHLFHDWRFLDDGSENPKFELNKPAFK 66
Query: 132 --KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPL 183
KI++AG NFGCGSSREHAP A+ G + +++ SYA IF+ N G I P+
Sbjct: 67 GAKILVAGDNFGCGSSREHAPWAIEDFGFNTIISTSYADIFYSNCFKNG-ILPI 119
>gi|383621473|ref|ZP_09947879.1| 3-isopropylmalate dehydratase, small subunit [Halobiforma lacisalsi
AJ5]
gi|448702008|ref|ZP_21699761.1| 3-isopropylmalate dehydratase small subunit [Halobiforma lacisalsi
AJ5]
gi|445778201|gb|EMA29159.1| 3-isopropylmalate dehydratase small subunit [Halobiforma lacisalsi
AJ5]
Length = 243
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 60/106 (56%), Gaps = 8/106 (7%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYK--- 132
+ G++IDTDQIIPA ++ +V ++ LG +A T D + +++
Sbjct: 52 IRGNDIDTDQIIPARFMKVVT-----FDGLGEFAFFDQRFTEDDDLKDHPMNEDRFQDSS 106
Query: 133 IIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG 178
+++ NFGCGSSREHAP AL G A++ ES+A IF N +A G
Sbjct: 107 VMVVNSNFGCGSSREHAPQALMRWGIDALIGESFAEIFAGNCLALG 152
>gi|161527931|ref|YP_001581757.1| 3-isopropylmalate dehydratase small subunit [Nitrosopumilus
maritimus SCM1]
gi|160339232|gb|ABX12319.1| 3-isopropylmalate dehydratase, small subunit [Nitrosopumilus
maritimus SCM1]
Length = 194
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/126 (39%), Positives = 66/126 (52%), Gaps = 24/126 (19%)
Query: 80 NIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENET--------KTKY 131
N+DTDQI+P ++L LV +K G G + R+ DENE +KY
Sbjct: 18 NVDTDQIVPKQFLKLV-------QKSG----FGKFLFFNWRY-DENENPKSDFVLNDSKY 65
Query: 132 K---IIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEAR 188
I++AG NFGCGSSREHA AL G S ++A S+A IFF N G I P+ E
Sbjct: 66 DNSHILVAGDNFGCGSSREHAVWALQDYGFSVIIAPSFADIFFSNCFKNG-ILPISLEQS 124
Query: 189 LCEECS 194
+ E+
Sbjct: 125 VVEKLQ 130
>gi|154150143|ref|YP_001403761.1| 3-isopropylmalate dehydratase small subunit [Methanoregula boonei
6A8]
gi|153998695|gb|ABS55118.1| 3-isopropylmalate dehydratase, small subunit [Methanoregula boonei
6A8]
Length = 156
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 79/161 (49%), Gaps = 21/161 (13%)
Query: 80 NIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKIIIAGGN 139
+IDTD +I YL + ++ L L T R K +I+AG N
Sbjct: 13 DIDTDLVIAGRYL-----RTKDKSVWATHVLEDLDPTLAPRL--------KGAVIVAGKN 59
Query: 140 FGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEECSTGDVV 199
FGCGSSRE A AL AG A++A S+ RIFFRN++ G PL C E G V
Sbjct: 60 FGCGSSREQAAFALREAGVIAIIAPSFGRIFFRNAINIG--LPLIESTLTCTE---GTPV 114
Query: 200 TIEIAESRLINHTTGKEYKLKPI-GDLGPVIDAGGIFAYAR 239
+++ + T GK + ++P+ + +++AGG+ Y R
Sbjct: 115 AFDLSAGWV--DTEGKRHAIRPLSARMQEILEAGGLVEYWR 153
>gi|340776688|ref|ZP_08696631.1| isopropylmalate isomerase small subunit [Acetobacter aceti NBRC
14818]
Length = 206
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 79/155 (50%), Gaps = 19/155 (12%)
Query: 80 NIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGL----PATYTTRFIDENETKTKYKIII 135
NIDTD+IIPA +L + LG +A G+ + F+ E K +I++
Sbjct: 18 NIDTDKIIPARFLKTT-----KRTGLGVHAFDGMRYRPDGSENPDFVLNKEPYRKAEILV 72
Query: 136 AGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEEC-- 193
NFGCGSSREHAP AL G V+A S+A IFF NS G I P+ +C+E
Sbjct: 73 THENFGCGSSREHAPWALLDFGIRCVIAPSFADIFFNNSFKNG-ILPIRLPREVCDELMS 131
Query: 194 ----STGDVVTIEIAESRLINHTTGKE--YKLKPI 222
+ +T+++A +I G+E +++ P+
Sbjct: 132 DASQGSNSRITVDLARQVVI-RPDGQEISFEIDPL 165
>gi|428300236|ref|YP_007138542.1| 3-isopropylmalate dehydratase small subunit [Calothrix sp. PCC
6303]
gi|428236780|gb|AFZ02570.1| 3-isopropylmalate dehydratase, small subunit [Calothrix sp. PCC
6303]
Length = 194
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 59/103 (57%), Gaps = 7/103 (6%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKIII 135
++G++IDTD+IIPA YL + ++ LG +A F + + KI+I
Sbjct: 14 LIGNDIDTDRIIPARYLRSI-----TFDGLGQHAFADDRIGGQHPF--DQPQYQEAKILI 66
Query: 136 AGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG 178
NFGCGSSREHAP A+ G A++ ES+A IFF N VA G
Sbjct: 67 VNRNFGCGSSREHAPQAIAKWGIKALIGESFAEIFFGNCVAIG 109
>gi|400404115|ref|YP_006587183.1| 3-isopropylmalate dehydratase small subunit [Candidatus Carsonella
ruddii CS isolate Thao2000]
gi|400362683|gb|AFP83755.1| 3-isopropylmalate dehydratase small subunit [Candidatus Carsonella
ruddii CS isolate Thao2000]
Length = 183
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 57/102 (55%), Gaps = 2/102 (1%)
Query: 79 DNIDTDQIIPAEYLTLVPSNPDEYEKLGS--YALIGLPATYTTRFIDENETKTKYKIIIA 136
DNIDTD IIP ++L + N + Y + Y FI N+ K KI+I+
Sbjct: 13 DNIDTDLIIPKQFLKTLKKNGFFFCLFYDIRYIINNNLIYYNKDFILNNKFLKKTKILIS 72
Query: 137 GGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG 178
G NFGCGSSREHA A+ G ++A+SY+ IF+ N++ G
Sbjct: 73 GKNFGCGSSREHAVWAIKDYGIKVIIAKSYSDIFYDNAMKNG 114
>gi|386876617|ref|ZP_10118716.1| 3-isopropylmalate dehydratase, small subunit [Candidatus
Nitrosopumilus salaria BD31]
gi|386805579|gb|EIJ65099.1| 3-isopropylmalate dehydratase, small subunit [Candidatus
Nitrosopumilus salaria BD31]
Length = 194
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 65/126 (51%), Gaps = 24/126 (19%)
Query: 80 NIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETK--------TKY 131
N+DTDQI+P ++L L+ +K G + Y DENE K +KY
Sbjct: 18 NVDTDQIVPKQFLKLI-------QKSGFGKFLFFDWRY-----DENENKKPDFVLNDSKY 65
Query: 132 ---KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEAR 188
KI++ G NFGCGSSREHA AL G S ++A S+A IFF N G I P+ + +
Sbjct: 66 DGSKILVTGDNFGCGSSREHAVWALLDYGFSVIIAPSFADIFFSNCFKNG-ILPISLDEK 124
Query: 189 LCEECS 194
E+
Sbjct: 125 TVEKLQ 130
>gi|326404540|ref|YP_004284622.1| 3-isopropylmalate dehydratase small subunit [Acidiphilium
multivorum AIU301]
gi|338986251|ref|ZP_08633331.1| 3-isopropylmalate dehydratase, small subunit [Acidiphilium sp. PM]
gi|325051402|dbj|BAJ81740.1| 3-isopropylmalate dehydratase small subunit [Acidiphilium
multivorum AIU301]
gi|338206827|gb|EGO94883.1| 3-isopropylmalate dehydratase, small subunit [Acidiphilium sp. PM]
Length = 207
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 61/116 (52%), Gaps = 10/116 (8%)
Query: 80 NIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGL----PATYTTRFIDENETKTKYKIII 135
N+DTD+IIPA +L + + LG +A GL + F+ E + I++
Sbjct: 19 NVDTDKIIPARFLKTIKRS-----GLGKHAFAGLRYNEDGSENPDFVLNREPYRQAHILV 73
Query: 136 AGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
AG NFGCGSSREHAP AL G V+A S+A IFF N G I P+ CE
Sbjct: 74 AGENFGCGSSREHAPWALLDFGIRCVIAPSFADIFFNNCFKNG-ILPIVLPREQCE 128
>gi|359754994|gb|AEV59693.1| 3-isopropylmalate dehydratase small subunit [uncultured archaeon]
Length = 157
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 81/164 (49%), Gaps = 20/164 (12%)
Query: 77 VGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKIIIA 136
+G +IDTDQII YL + + L L T R + II+A
Sbjct: 10 LGRDIDTDQIIAGRYL-----RTKDRSVWAEHVLEDLDPTLAER--------VRGAIIVA 56
Query: 137 GGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEECSTG 196
G N GCGSSRE A VAL AG VVA S+ARIFFRN++ G P+ EA + C+ G
Sbjct: 57 GRNMGCGSSREQAVVALREAGVVGVVAPSFARIFFRNAINIG--LPV-IEAPV-PPCTDG 112
Query: 197 DVVTIEIAESRLINHTTGKEYKLKPI-GDLGPVIDAGGIFAYAR 239
V+ ++ + GK Y +P+ + ++ AGG+ Y R
Sbjct: 113 VRVSFDLDAGWV--EVDGKRYPARPLSAKMNAILRAGGLVPYWR 154
>gi|322371164|ref|ZP_08045716.1| 3-isopropylmalate dehydratase, small subunit [Haladaptatus
paucihalophilus DX253]
gi|320549154|gb|EFW90816.1| 3-isopropylmalate dehydratase, small subunit [Haladaptatus
paucihalophilus DX253]
Length = 199
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 61/113 (53%), Gaps = 22/113 (19%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY---- 131
V G++IDTDQIIPA ++ +V ++ LG +A + RF D N+ +
Sbjct: 15 VRGNDIDTDQIIPARFMKVVT-----FDGLGQFAF------FDQRF-DSNDDPQPHPFND 62
Query: 132 ------KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG 178
I++ NFGCGSSREHAP AL G A+V ES+A IF N +A G
Sbjct: 63 DAHNGASILVVNANFGCGSSREHAPQALARWGIDAIVGESFAEIFAGNCLALG 115
>gi|443468371|ref|ZP_21058598.1| 3-isopropylmalate dehydratase small subunit [Pseudomonas
pseudoalcaligenes KF707]
gi|442897499|gb|ELS24427.1| 3-isopropylmalate dehydratase small subunit [Pseudomonas
pseudoalcaligenes KF707]
Length = 214
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 82/156 (52%), Gaps = 24/156 (15%)
Query: 80 NIDTDQIIPAEYLTLV------PSNPDEYEKLGSYALIGLPATYTTR------FIDENET 127
N+DTDQIIP ++L + P+ DE+ Y +G P ++ F+
Sbjct: 18 NVDTDQIIPKQFLKSIKRTGFGPNLFDEWR----YLDVGQPNQDNSKRPVNPEFVLNFPR 73
Query: 128 KTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPL---D 184
+++A NFGCGSSREHAP AL G A++A SYA IFF NS G + P+ D
Sbjct: 74 YQGASVLLARENFGCGSSREHAPWALEEYGFRAIIAPSYADIFFNNSFKNG-LLPIILKD 132
Query: 185 SEA-RLCEEC--STGDVVTIEIAESRLINHTTGKEY 217
E L ++C + G +T+++A ++ + GK+Y
Sbjct: 133 EEVDELFQQCEATEGYQLTVDLA-AQTVTRPDGKQY 167
>gi|258577517|ref|XP_002542940.1| 3-isopropylmalate dehydratase [Uncinocarpus reesii 1704]
gi|237903206|gb|EEP77607.1| 3-isopropylmalate dehydratase [Uncinocarpus reesii 1704]
Length = 3346
Score = 77.8 bits (190), Expect = 4e-12, Method: Composition-based stats.
Identities = 48/145 (33%), Positives = 74/145 (51%), Gaps = 14/145 (9%)
Query: 80 NIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGL----PATYTTRFIDENETKTKYKIII 135
N+DTD IIP ++L + + LGS L + F+ E + KI++
Sbjct: 959 NVDTDAIIPKQFLKTI-----KRTGLGSALFHALRYNEDGSENPNFVLNKEPYRRSKILV 1013
Query: 136 AGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEA----RLCE 191
+G NFGCGSSREHAP AL G ++A SYA IFF N+ G + + +A ++
Sbjct: 1014 SGENFGCGSSREHAPWALLDFGIKCIIAPSYADIFFNNTFKNGMLPIIIPDAATIKKITT 1073
Query: 192 ECSTGDVVTIEIAESRLINHTTGKE 216
E +G+ + +++ R IN G +
Sbjct: 1074 EAESGNEIEVDLVNQR-INDAAGNK 1097
>gi|448361569|ref|ZP_21550185.1| 3-isopropylmalate dehydratase small subunit [Natrialba asiatica DSM
12278]
gi|445650179|gb|ELZ03106.1| 3-isopropylmalate dehydratase small subunit [Natrialba asiatica DSM
12278]
Length = 242
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 60/106 (56%), Gaps = 8/106 (7%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYK--- 132
+ G++IDTDQIIPA ++ +V ++ LG +A T D + +++
Sbjct: 51 IRGNDIDTDQIIPARFMKVVT-----FDGLGEFAFFDKRFTEADDLKDHPFNEDRFQDSS 105
Query: 133 IIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG 178
+++ NFGCGSSREHAP AL G A++ ES+A IF N +A G
Sbjct: 106 VMVVNSNFGCGSSREHAPQALMRWGIDAIIGESFAEIFAGNCLALG 151
>gi|385262530|ref|ZP_10040634.1| 3-isopropylmalate dehydratase, small subunit [Streptococcus sp.
SK643]
gi|385190431|gb|EIF37878.1| 3-isopropylmalate dehydratase, small subunit [Streptococcus sp.
SK643]
Length = 197
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 74/148 (50%), Gaps = 26/148 (17%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT------ 129
++ DNIDTDQI+P ++L L+ + G Y + Y R++D+ T+
Sbjct: 14 LMNDNIDTDQILPKQFLKLIDK-----KGFGKYLM------YAWRYLDDKYTEDPDFVFN 62
Query: 130 -----KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGE---IY 181
K I+I+G NFG GSSREHA AL G V+A S+ I + N + G +
Sbjct: 63 RPEYRKASILISGDNFGAGSSREHAAWALADYGFKVVIAGSFGDIHYNNELNNGMLPIVQ 122
Query: 182 PLDSEARLCEECSTGDVVTIEIAESRLI 209
P + +L + D VT+++ + ++I
Sbjct: 123 PREVREKLA-QLQPSDQVTVDLEQQKII 149
>gi|307154068|ref|YP_003889452.1| 3-isopropylmalate dehydratase small subunit [Cyanothece sp. PCC
7822]
gi|306984296|gb|ADN16177.1| 3-isopropylmalate dehydratase, small subunit [Cyanothece sp. PCC
7822]
Length = 201
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 56/103 (54%), Gaps = 5/103 (4%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKIII 135
+VGD+IDTD+IIPA +L V +E LG I + + +++
Sbjct: 14 LVGDDIDTDRIIPARFLRCVT-----FEGLGEQVFIDDRQQMQGKHPFDLPQYQGANLLV 68
Query: 136 AGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG 178
NFGCGSSREHAP A+ G A++ ES+A IFF N +A G
Sbjct: 69 VNANFGCGSSREHAPQAIIRWGIKAIIGESFAEIFFGNCIANG 111
>gi|148261139|ref|YP_001235266.1| 3-isopropylmalate dehydratase small subunit [Acidiphilium cryptum
JF-5]
gi|146402820|gb|ABQ31347.1| 3-isopropylmalate dehydratase, small subunit [Acidiphilium cryptum
JF-5]
Length = 207
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 61/116 (52%), Gaps = 10/116 (8%)
Query: 80 NIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGL----PATYTTRFIDENETKTKYKIII 135
N+DTD+IIPA +L + + LG +A GL + F+ E + I++
Sbjct: 19 NVDTDKIIPARFLKTIKRS-----GLGKHAFAGLRYNEDGSENPDFVLNREPYRQAHILV 73
Query: 136 AGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
AG NFGCGSSREHAP AL G V+A S+A IFF N G I P+ CE
Sbjct: 74 AGENFGCGSSREHAPWALLDFGIRCVIAPSFADIFFNNCFKNG-ILPIVLPREQCE 128
>gi|86606841|ref|YP_475604.1| isopropylmalate isomerase small subunit [Synechococcus sp.
JA-3-3Ab]
gi|86555383|gb|ABD00341.1| 3-isopropylmalate dehydratase, small subunit [Synechococcus sp.
JA-3-3Ab]
Length = 195
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 58/103 (56%), Gaps = 5/103 (4%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKIII 135
+VG++IDTD+IIPA +L V +E LG + A + + +I++
Sbjct: 10 LVGNDIDTDRIIPARFLKCV-----TFEGLGQHVFADDRAQNPGQHPFDLPQYQGAEILL 64
Query: 136 AGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG 178
NFGCGSSREHAP AL G A+V ES+A IFF N +A G
Sbjct: 65 VNANFGCGSSREHAPQALAKWGIRALVGESFAEIFFGNCLALG 107
>gi|307708799|ref|ZP_07645261.1| 3-isopropylmalate dehydratase, small subunit [Streptococcus mitis
NCTC 12261]
gi|307615165|gb|EFN94376.1| 3-isopropylmalate dehydratase, small subunit [Streptococcus mitis
NCTC 12261]
Length = 197
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 83/170 (48%), Gaps = 36/170 (21%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT------ 129
++ DNIDTDQI+P ++L L+ + G Y + Y R++D+ T+
Sbjct: 14 LMNDNIDTDQILPKQFLKLIDK-----KGFGKYLM------YAWRYLDDKYTEDPDFVFN 62
Query: 130 -----KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGE---IY 181
K I+I+G NFG GSSREHA AL G V+A S+ I + N + G +
Sbjct: 63 QPEYRKASILISGDNFGAGSSREHAAWALADYGFKVVIAGSFGDIHYNNELNNGMLPIVQ 122
Query: 182 PLDSEARLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLGPVIDA 231
P + +L + T D VT+++ + ++I+ P+G+ ID+
Sbjct: 123 PREVREKLAQLKPT-DQVTVDLEQQKIIS----------PVGEFTFEIDS 161
>gi|407781866|ref|ZP_11129082.1| isopropylmalate isomerase small subunit [Oceanibaculum indicum P24]
gi|407206905|gb|EKE76849.1| isopropylmalate isomerase small subunit [Oceanibaculum indicum P24]
Length = 203
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 64/124 (51%), Gaps = 12/124 (9%)
Query: 80 NIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTR----FIDENETKTKYKIII 135
NIDTD IIP +YL + + LG + + + F+ E TK +I++
Sbjct: 18 NIDTDMIIPKQYLKTI-----KRTGLGQFLFDEMRRDSNGKENPDFVLNREPYTKAEILV 72
Query: 136 AGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEI---YPLDSEARLCEE 192
AG NFGCGSSREHAP AL G AV+A S+A IFF N G + P + +L E+
Sbjct: 73 AGDNFGCGSSREHAPWALLDFGIRAVIAPSFADIFFNNCFKNGILPIRLPQEIVDQLTED 132
Query: 193 CSTG 196
G
Sbjct: 133 AKLG 136
>gi|365873267|ref|ZP_09412800.1| 3-isopropylmalate dehydratase, small subunit [Thermanaerovibrio
velox DSM 12556]
gi|363983354|gb|EHM09561.1| 3-isopropylmalate dehydratase, small subunit [Thermanaerovibrio
velox DSM 12556]
Length = 172
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 88/179 (49%), Gaps = 22/179 (12%)
Query: 69 TFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETK 128
G +V GD++DTD I +YL ++P +K+ Y+ P EN K
Sbjct: 5 VLRGRAWVFGDDVDTDLIYHNKYLA--ETDP---KKMAQYSFEYYPGK-------ENFAK 52
Query: 129 TKY--KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPL--- 183
++AG NFG GSSREHA L G V+AES+ARI++RN++ G YP+
Sbjct: 53 EVRPGDFVVAGRNFGTGSSREHAVYCLKEIGVPMVLAESFARIYYRNAINNG--YPVLFV 110
Query: 184 --DSEARLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLG-PVIDAGGIFAYAR 239
S+A + GD + ++ + + N T G E+ + DL ++ AGG+ Y +
Sbjct: 111 KGLSDAIKAGQVKDGDELEVDTSTGVIRNLTQGVEFHGDAVTDLERDIMAAGGLIEYLK 169
>gi|254302442|ref|ZP_04969800.1| 3-isopropylmalate dehydratase [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
gi|148322634|gb|EDK87884.1| 3-isopropylmalate dehydratase [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
Length = 191
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/151 (37%), Positives = 77/151 (50%), Gaps = 19/151 (12%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDE---NETKTKYK 132
++ DNIDTDQ+IP +YL EK G + Y D N K +YK
Sbjct: 14 IMNDNIDTDQLIPKQYLKST-------EKTGFGKYLFDEWRYNEDGSDNLNFNLNKAEYK 66
Query: 133 ---IIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
I+I G NFGCGSSREHA AL G +VA Y+ IF+ N + G + P+
Sbjct: 67 KGTILITGDNFGCGSSREHAAWALQDYGFHVIVAGGYSGIFYMNWLNNGHL-PITLPKED 125
Query: 190 CEECS--TGD-VVTIEIAESRLINHTTGKEY 217
+E S +GD VVT+++ ++L GK+Y
Sbjct: 126 RDELSKLSGDIVVTVDLENNKL--SANGKDY 154
>gi|342163894|ref|YP_004768533.1| isopropylmalate isomerase small subunit [Streptococcus
pseudopneumoniae IS7493]
gi|341933776|gb|AEL10673.1| isopropylmalate isomerase small subunit [Streptococcus
pseudopneumoniae IS7493]
Length = 197
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 82/170 (48%), Gaps = 36/170 (21%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT------ 129
++ DNIDTDQI+P ++L L+ + G Y + Y R++D+ T+
Sbjct: 14 LMNDNIDTDQILPKQFLKLIDK-----KGFGKYLM------YAWRYLDDKYTEDPDFVFN 62
Query: 130 -----KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGE---IY 181
K I+I+G NFG GSSREHA AL G V+A S+ I + N + G +
Sbjct: 63 RPEYRKASILISGDNFGAGSSREHAAWALADYGFKVVIAGSFGDIHYNNELNNGMLPIVQ 122
Query: 182 PLDSEARLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLGPVIDA 231
P + +L + D +T+++ + ++I+ PIG+ ID+
Sbjct: 123 PREVREKLA-QLKPSDQITVDLEQQKIIS----------PIGEFTFEIDS 161
>gi|407938195|ref|YP_006853836.1| isopropylmalate isomerase small subunit [Acidovorax sp. KKS102]
gi|407895989|gb|AFU45198.1| isopropylmalate isomerase small subunit [Acidovorax sp. KKS102]
Length = 216
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/152 (36%), Positives = 81/152 (53%), Gaps = 16/152 (10%)
Query: 79 DNIDTDQIIPAEYLTLV------PSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYK 132
+N+DTD IIP ++L + P+ DE+ L G+P + D + +YK
Sbjct: 17 ENVDTDAIIPKQFLKSIKKTGFGPNLFDEWRYLDK-GEPGIPESQRKPNPDFVLNQPRYK 75
Query: 133 ---IIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGE---IYPLDSE 186
I+IA NFGCGSSREHAP AL G AV+A S+A IFF N G + P +
Sbjct: 76 GASILIARKNFGCGSSREHAPWALDQFGFRAVIAPSFADIFFNNCFKNGLLPIVLPEATV 135
Query: 187 ARLCEECST--GDVVTIEIAESRLINHTTGKE 216
A+L +E + G +TI++ E ++I G+E
Sbjct: 136 AQLFDEVAAFPGYQLTIDL-ERQVIVRPQGEE 166
>gi|170077082|ref|YP_001733720.1| 3-isopropylmalate dehydratase small subunit [Synechococcus sp. PCC
7002]
gi|169884751|gb|ACA98464.1| 3-isopropylmalate dehydratase, small subunit [Synechococcus sp. PCC
7002]
Length = 197
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 64/131 (48%), Gaps = 17/131 (12%)
Query: 78 GDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKIIIAG 137
G++IDTD+IIPA +L V ++ LG A + I++
Sbjct: 17 GNDIDTDRIIPARFLKCVT-----FDGLGEQAFADDRQQLDGEHPFDLPQYQNANILVVN 71
Query: 138 GNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCEECSTGD 197
GNFGCGSSREHAP AL G A+V ES+A IFF N +A G P C T D
Sbjct: 72 GNFGCGSSREHAPQALLKWGIEAIVGESFAEIFFGNCLANG--VP----------CVTAD 119
Query: 198 VVTIEIAESRL 208
T+E + +L
Sbjct: 120 RATVEALQGQL 130
>gi|399911104|ref|ZP_10779418.1| isopropylmalate isomerase small subunit [Halomonas sp. KM-1]
Length = 205
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 73/138 (52%), Gaps = 10/138 (7%)
Query: 79 DNIDTDQIIPAEYLTLVPSNPDE--YEKLGSYALIGLP-ATYTTRFIDENETKTKYKIII 135
+NIDTDQIIPA YL P E YE + L P F + T+ + I+I
Sbjct: 17 ENIDTDQIIPARYL----HRPREAGYEDQLFHDLRFTPDGKPKVGFPLNDPTQAESTILI 72
Query: 136 AGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG-EIYPLDSEA--RLCEE 192
AG NFGCGSSREHA AL G V+A + IFF NS+ G + LD ++ L +E
Sbjct: 73 AGRNFGCGSSREHAVWALLDYGFRVVIAPDFGDIFFNNSLKNGLLVIRLDEQSIQSLMQE 132
Query: 193 CSTGDVVTIEIAESRLIN 210
++T+++ + +IN
Sbjct: 133 EGQPQILTVDLPQQSIIN 150
>gi|448540882|ref|ZP_21623803.1| 3-isopropylmalate dehydratase small subunit [Haloferax sp. ATCC
BAA-646]
gi|448549358|ref|ZP_21627963.1| 3-isopropylmalate dehydratase small subunit [Haloferax sp. ATCC
BAA-645]
gi|448555529|ref|ZP_21631569.1| 3-isopropylmalate dehydratase small subunit [Haloferax sp. ATCC
BAA-644]
gi|445709035|gb|ELZ60870.1| 3-isopropylmalate dehydratase small subunit [Haloferax sp. ATCC
BAA-646]
gi|445712406|gb|ELZ64187.1| 3-isopropylmalate dehydratase small subunit [Haloferax sp. ATCC
BAA-645]
gi|445718274|gb|ELZ69977.1| 3-isopropylmalate dehydratase small subunit [Haloferax sp. ATCC
BAA-644]
Length = 202
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 63/113 (55%), Gaps = 22/113 (19%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY---- 131
+ G++IDTDQIIPA ++ +V ++ LG +A + R+ DEN+ ++
Sbjct: 18 IRGNDIDTDQIIPARFMKVVT-----FDGLGEFAF------FDQRY-DENDEPKEHPMNE 65
Query: 132 ------KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG 178
I++ NFGCGSSREHAP AL G A+V ES+A IF N +A G
Sbjct: 66 PQFQDAAIMVVNANFGCGSSREHAPQALMRWGIDAIVGESFAEIFAGNCLALG 118
>gi|307706722|ref|ZP_07643527.1| 3-isopropylmalate dehydratase, small subunit [Streptococcus mitis
SK321]
gi|307617807|gb|EFN96969.1| 3-isopropylmalate dehydratase, small subunit [Streptococcus mitis
SK321]
Length = 197
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 74/148 (50%), Gaps = 26/148 (17%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT------ 129
++ DNIDTDQI+P ++L L+ + G Y + Y R++D+ T+
Sbjct: 14 LMNDNIDTDQILPKQFLKLIDK-----KGFGKYLM------YAWRYLDDKYTEDPDFVFN 62
Query: 130 -----KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGE---IY 181
K I+I+G NFG GSSREHA AL G V+A S+ I + N + G +
Sbjct: 63 RPEYRKATILISGDNFGAGSSREHAAWALADYGFKVVIAGSFGDIHYNNELNNGMLPIVQ 122
Query: 182 PLDSEARLCEECSTGDVVTIEIAESRLI 209
P + +L + D VT+++ + ++I
Sbjct: 123 PREVREKLA-QLQPSDQVTVDLEQQKII 149
>gi|186682766|ref|YP_001865962.1| homoaconitate hydratase family protein [Nostoc punctiforme PCC
73102]
gi|186465218|gb|ACC81019.1| homoaconitate hydratase family protein [Nostoc punctiforme PCC
73102]
Length = 569
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/102 (46%), Positives = 59/102 (57%), Gaps = 14/102 (13%)
Query: 77 VGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKIIIA 136
+GD+I+TD IIPA T D+ + L YAL I E KY +I A
Sbjct: 10 LGDDINTDDIIPANRAT-----NDDLDSLKHYAL--------EHVIGAGEL-LKYDVIEA 55
Query: 137 GGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG 178
G NFGCGSSRE AP+AL AAG + + A S+A IF+RNS+ G
Sbjct: 56 GENFGCGSSREIAPIALQAAGITKIRARSFAEIFYRNSINIG 97
>gi|406586291|ref|ZP_11061224.1| isopropylmalate isomerase small subunit [Streptococcus sp. GMD1S]
gi|419816819|ref|ZP_14340992.1| isopropylmalate isomerase small subunit [Streptococcus sp. GMD4S]
gi|404466853|gb|EKA12147.1| isopropylmalate isomerase small subunit [Streptococcus sp. GMD4S]
gi|404474240|gb|EKA18558.1| isopropylmalate isomerase small subunit [Streptococcus sp. GMD1S]
Length = 197
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 83/170 (48%), Gaps = 36/170 (21%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT------ 129
++ DNIDTDQI+P ++L L+ + G Y + Y R++D+ T+
Sbjct: 14 LMNDNIDTDQILPKQFLKLIDK-----KGFGKYLM------YAWRYLDDKYTEDPDFVFN 62
Query: 130 -----KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGE---IY 181
K I+I+G NFG GSSREHA AL G V+A S+ I + N + G +
Sbjct: 63 RPEYRKASILISGDNFGAGSSREHAAWALADYGFKVVIAGSFGDIHYNNELNNGMLPIVQ 122
Query: 182 PLDSEARLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLGPVIDA 231
P + +L + T D VT+++ + ++I+ P+G+ ID+
Sbjct: 123 PREVREKLAQLKPT-DQVTVDLEQQKIIS----------PVGEFTFEIDS 161
>gi|257051730|ref|YP_003129563.1| 3-isopropylmalate dehydratase, small subunit [Halorhabdus utahensis
DSM 12940]
gi|256690493|gb|ACV10830.1| 3-isopropylmalate dehydratase, small subunit [Halorhabdus utahensis
DSM 12940]
Length = 206
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 60/112 (53%), Gaps = 20/112 (17%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT------ 129
+ G++IDTDQIIPA ++ +V ++ LG +A + R+ DE+ K
Sbjct: 21 IRGNDIDTDQIIPARFMKVVT-----FDGLGQFAF------FDVRYDDEDNQKEHPMNED 69
Query: 130 ---KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG 178
+++ NFGCGSSREHAP AL G A + ES+A IF N +A G
Sbjct: 70 RFRDANVMVVNDNFGCGSSREHAPQALMRWGIDAFIGESFAEIFAGNCLALG 121
>gi|58425154|gb|AAW74191.1| 3-isopropylmalate dehydratase small subunit [Xanthomonas oryzae pv.
oryzae KACC 10331]
Length = 255
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 81/157 (51%), Gaps = 22/157 (14%)
Query: 80 NIDTDQIIPAEYLTLV------PSNPDEYEKLGSYALIGLPA-TYTTR-----FIDENET 127
N+DTDQIIP ++L + P+ DE+ Y IG P +TR F+
Sbjct: 58 NVDTDQIIPKQFLKSIKRTGFGPNLFDEWR----YLDIGEPGRDNSTRPLNPEFVLNFPR 113
Query: 128 KTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEA 187
+++A NFGCGSSREHAP AL G AV+A S+A IF+ NS G + + +EA
Sbjct: 114 YQGASVLLARENFGCGSSREHAPWALDEYGFRAVIAPSFADIFYNNSFKNGLLPIVLAEA 173
Query: 188 R---LCEEC--STGDVVTIEIAESRLINHTTGKEYKL 219
L E+C + G +T+++A R + G EY
Sbjct: 174 EVDALFEQCLANEGYQLTVDLAAQR-VRRPDGVEYSF 209
>gi|363891573|ref|ZP_09318751.1| 3-isopropylmalate dehydratase, small subunit [Eubacteriaceae
bacterium CM2]
gi|361965116|gb|EHL18107.1| 3-isopropylmalate dehydratase, small subunit [Eubacteriaceae
bacterium CM2]
Length = 190
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 69/144 (47%), Gaps = 19/144 (13%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSN--------PDEYEKLGSYALIGLPATYTTRFIDENET 127
++ DNIDTD +IP YL V P Y+K G+ F+ E
Sbjct: 14 ILNDNIDTDILIPKNYLKSVKRTGFGDFVFAPWRYDKDGNK---------IKDFVLNQEK 64
Query: 128 KTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEI-YPLDSE 186
I+I G NFGCGSSREHA AL G V+A Y+ IF+ N + G + LDSE
Sbjct: 65 YADASILITGENFGCGSSREHAAWALQDFGIRVVIAGGYSDIFYNNWLNNGNVAIKLDSE 124
Query: 187 AR-LCEECSTGDVVTIEIAESRLI 209
R + E + G + I++ +++
Sbjct: 125 KRKMLSEIADGKEIEIDLINQKIL 148
>gi|448376862|ref|ZP_21559862.1| 3-isopropylmalate dehydratase, small subunit [Halovivax asiaticus
JCM 14624]
gi|445656598|gb|ELZ09432.1| 3-isopropylmalate dehydratase, small subunit [Halovivax asiaticus
JCM 14624]
Length = 221
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 79/161 (49%), Gaps = 28/161 (17%)
Query: 65 EPTATFHGLCY-VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFID 123
EP HG + G+ IDTDQI+PA +L + +E LG +A + R+ D
Sbjct: 7 EPVERVHGTGVPIRGNEIDTDQILPARFLKAIT-----FEGLGQFAF------FDQRY-D 54
Query: 124 ENETKTKY----------KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRN 173
EN+ ++ I++ NFGCGSSREHAP AL G A+V ES+A IF N
Sbjct: 55 ENDDPLEHPFNDDRFTGASILVVNSNFGCGSSREHAPQALMRWGIDAIVGESFAEIFAGN 114
Query: 174 SVATG-EIYPLDSEA----RLCEECSTGDVVTIEIAESRLI 209
+ G D EA + E + D VT+ +A+ +I
Sbjct: 115 CLGLGIPTVTADHEAVTALQDWIENNPDDPVTVSVADEAVI 155
>gi|429334208|ref|ZP_19214880.1| isopropylmalate isomerase small subunit [Pseudomonas putida CSV86]
gi|428761046|gb|EKX83288.1| isopropylmalate isomerase small subunit [Pseudomonas putida CSV86]
Length = 215
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 81/153 (52%), Gaps = 22/153 (14%)
Query: 80 NIDTDQIIPAEYLTLV------PSNPDEYEKLGSYALIGLPATYTTR------FIDENET 127
N+DTDQIIP ++L + P+ DE+ Y +G P ++ F+ ++
Sbjct: 18 NVDTDQIIPKQFLKSIKRTGFGPNLFDEWR----YLDVGQPYQDNSKRPKNPDFVLNHDR 73
Query: 128 KTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEA 187
+++A NFGCGSSREHAP AL G +++A SYA IFF NS G + + S+A
Sbjct: 74 YQGASVLLARENFGCGSSREHAPWALEEYGFRSIIAPSYADIFFNNSFKNGLLPIILSDA 133
Query: 188 RLCE-----ECSTGDVVTIEIAESRLINHTTGK 215
+ E E + G +TI++ +++ + GK
Sbjct: 134 EVDELFKQVEAAPGYQLTIDL-QAQTVTRPDGK 165
>gi|419766149|ref|ZP_14292364.1| 3-isopropylmalate dehydratase, small subunit [Streptococcus mitis
SK579]
gi|383354425|gb|EID31990.1| 3-isopropylmalate dehydratase, small subunit [Streptococcus mitis
SK579]
Length = 197
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 75/148 (50%), Gaps = 26/148 (17%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT------ 129
++ DNIDTDQI+P ++L L+ + G Y + Y R++D+ T+
Sbjct: 14 LMNDNIDTDQILPKQFLKLIDK-----KGFGKYLM------YAWRYLDDKYTEDPDFVFN 62
Query: 130 -----KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGE---IY 181
K I+I+G NFG GSSREHA AL G V+A S+ I + N + G +
Sbjct: 63 RPEYRKASILISGDNFGAGSSREHAAWALADYGFKVVIAGSFGDIHYNNELNNGMLPIVQ 122
Query: 182 PLDSEARLCEECSTGDVVTIEIAESRLI 209
P + +L + T D VT+++ + ++I
Sbjct: 123 PREVREKLAQLKPT-DQVTVDLEQQKII 149
>gi|119489836|ref|ZP_01622591.1| isopropylmalate isomerase small subunit [Lyngbya sp. PCC 8106]
gi|119454264|gb|EAW35415.1| isopropylmalate isomerase small subunit [Lyngbya sp. PCC 8106]
Length = 202
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 58/113 (51%), Gaps = 25/113 (22%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY---- 131
+VG +IDTD+IIPA +L V ++ LG D +T+ +
Sbjct: 14 LVGSDIDTDRIIPARFLRCV-----TFDGLGEQVFAD----------DRQQTQGNHPFDL 58
Query: 132 ------KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG 178
I++ GNFGCGSSREHAP AL G A++ ES+A IFF N VA G
Sbjct: 59 PQYQGANILVVNGNFGCGSSREHAPQALAKWGIQAIIGESFAEIFFGNCVAIG 111
>gi|373947889|ref|ZP_09607850.1| 3-isopropylmalate dehydratase small subunit [Shewanella baltica
OS183]
gi|386326263|ref|YP_006022380.1| 3-isopropylmalate dehydratase small subunit [Shewanella baltica
BA175]
gi|333820408|gb|AEG13074.1| 3-isopropylmalate dehydratase small subunit [Shewanella baltica
BA175]
gi|373884489|gb|EHQ13381.1| 3-isopropylmalate dehydratase small subunit [Shewanella baltica
OS183]
Length = 201
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 69/127 (54%), Gaps = 24/127 (18%)
Query: 65 EPTATFHGLCYVVGD-NIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFID 123
+P T GL ++ NIDTDQIIP ++L+ V + G+ + R++D
Sbjct: 2 QPFTTHTGLAVMIDSTNIDTDQIIPKQFLSKVTRDG-----------FGVHLFHDWRYLD 50
Query: 124 E---------NETKTKYK---IIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFF 171
+ + +++YK I++A NFGCGSSREHAP AL G A++A S+A IF+
Sbjct: 51 DAGDQPNPEFSLNQSRYKGASILLAQENFGCGSSREHAPWALADFGLRAIIAPSFADIFY 110
Query: 172 RNSVATG 178
NS+ G
Sbjct: 111 GNSINNG 117
>gi|383939672|ref|ZP_09992826.1| 3-isopropylmalate dehydratase, small subunit [Streptococcus
pseudopneumoniae SK674]
gi|418972742|ref|ZP_13520810.1| 3-isopropylmalate dehydratase, small subunit [Streptococcus
pseudopneumoniae ATCC BAA-960]
gi|383351254|gb|EID29065.1| 3-isopropylmalate dehydratase, small subunit [Streptococcus
pseudopneumoniae ATCC BAA-960]
gi|383712508|gb|EID69560.1| 3-isopropylmalate dehydratase, small subunit [Streptococcus
pseudopneumoniae SK674]
Length = 197
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 79/161 (49%), Gaps = 18/161 (11%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTR--FIDENETKTKYKI 133
++ DNIDTDQI+P ++L L+ + K YA L YT F+ K I
Sbjct: 14 LMNDNIDTDQILPKQFLKLIDKKG--FGKYLMYAWRYLDDLYTEDPDFVFNRPEYRKASI 71
Query: 134 IIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGE---IYPLDSEARLC 190
+I+G NFG GSSREHA AL G V+A S+ I + N + G + P + +L
Sbjct: 72 LISGDNFGAGSSREHAAWALADYGFKVVIAGSFGDIHYNNELNNGMLPIVQPREVREKLA 131
Query: 191 EECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLGPVIDA 231
+ D VT+++ + ++I+ PIG+ ID+
Sbjct: 132 -QLKPSDQVTVDLEQQKIIS----------PIGEFTFEIDS 161
>gi|336313080|ref|ZP_08568023.1| 3-isopropylmalate dehydratase small subunit [Shewanella sp. HN-41]
gi|335863200|gb|EGM68358.1| 3-isopropylmalate dehydratase small subunit [Shewanella sp. HN-41]
Length = 201
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 91/173 (52%), Gaps = 30/173 (17%)
Query: 65 EPTATFHGLCYVVGD-NIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFID 123
+P T GL ++ NIDTDQIIP ++L+ V + G+ + R++D
Sbjct: 2 QPFTTHTGLAVMIDSTNIDTDQIIPKQFLSKVTRDG-----------FGVHLFHDWRYLD 50
Query: 124 ENE---------TKTKYK---IIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFF 171
+ +++YK I++A NFGCGSSREHAP AL G A++A S+A IF+
Sbjct: 51 DAGDQPNPEFPLNQSRYKGASILLAQENFGCGSSREHAPWALADFGLRAIIAPSFADIFY 110
Query: 172 RNSVATGEIYPLDSEA---RLCEECST--GDVVTIEIAESRLINHTTGKEYKL 219
NS+ G + + + A +L +E + G +T+++ ++I+ +G E+
Sbjct: 111 GNSINNGLLPVVLTHAQVRQLMDEVAAEEGAKITVDLTACKVIS-PSGAEFSF 162
>gi|443315952|ref|ZP_21045418.1| 3-isopropylmalate dehydratase small subunit [Leptolyngbya sp. PCC
6406]
gi|442784442|gb|ELR94316.1| 3-isopropylmalate dehydratase small subunit [Leptolyngbya sp. PCC
6406]
Length = 198
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 54/101 (53%), Gaps = 5/101 (4%)
Query: 78 GDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKIIIAG 137
GD+IDTD+IIPA +L V ++ LG R + K+++
Sbjct: 16 GDDIDTDRIIPARFLRCV-----TFDGLGEQVFADDRTQTQGRHPFDQSVYAGAKVLVVN 70
Query: 138 GNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG 178
NFGCGSSREHAP A+ G A++ ES+A IFF N VA G
Sbjct: 71 RNFGCGSSREHAPQAIARWGIQALIGESFAEIFFGNCVAMG 111
>gi|419816270|ref|ZP_14340583.1| isopropylmalate isomerase small subunit, partial [Streptococcus sp.
GMD2S]
gi|404462396|gb|EKA08153.1| isopropylmalate isomerase small subunit, partial [Streptococcus sp.
GMD2S]
Length = 195
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 83/170 (48%), Gaps = 36/170 (21%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT------ 129
++ DNIDTDQI+P ++L L+ + G Y + Y R++D+ T+
Sbjct: 12 LMNDNIDTDQILPKQFLKLIDK-----KGFGKYLM------YAWRYLDDKYTEDPDFVFN 60
Query: 130 -----KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGE---IY 181
K I+I+G NFG GSSREHA AL G V+A S+ I + N + G +
Sbjct: 61 RPEYRKASILISGDNFGAGSSREHAAWALADYGFKVVIAGSFGDIHYNNELNNGMLPIVQ 120
Query: 182 PLDSEARLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLGPVIDA 231
P + +L + T D VT+++ + ++I+ P+G+ ID+
Sbjct: 121 PREVREKLAQLKPT-DQVTVDLEQQKIIS----------PVGEFTFEIDS 159
>gi|389847022|ref|YP_006349261.1| 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit
[Haloferax mediterranei ATCC 33500]
gi|448615031|ref|ZP_21664059.1| 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit
[Haloferax mediterranei ATCC 33500]
gi|388244328|gb|AFK19274.1| 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit
[Haloferax mediterranei ATCC 33500]
gi|445753118|gb|EMA04537.1| 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit
[Haloferax mediterranei ATCC 33500]
Length = 202
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 61/110 (55%), Gaps = 20/110 (18%)
Query: 78 GDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETK--------- 128
G++IDTDQIIPA ++ +V ++ LG +A + R+ + ++TK
Sbjct: 20 GNDIDTDQIIPARFMKVVT-----FDGLGEFAF------FDKRYDENDDTKDHPMNEPHF 68
Query: 129 TKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG 178
+++ NFGCGSSREHAP AL G A+V ES+A IF N +A G
Sbjct: 69 QDASVMVVNANFGCGSSREHAPQALMRWGIDAIVGESFAEIFAGNCLALG 118
>gi|218248497|ref|YP_002373868.1| isopropylmalate isomerase small subunit [Cyanothece sp. PCC 8801]
gi|257061561|ref|YP_003139449.1| isopropylmalate isomerase small subunit [Cyanothece sp. PCC 8802]
gi|218168975|gb|ACK67712.1| 3-isopropylmalate dehydratase, small subunit [Cyanothece sp. PCC
8801]
gi|256591727|gb|ACV02614.1| 3-isopropylmalate dehydratase, small subunit [Cyanothece sp. PCC
8802]
Length = 197
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 56/103 (54%), Gaps = 5/103 (4%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKIII 135
++GD+IDTD+IIPA +L V ++ LG A + + KI++
Sbjct: 14 LIGDDIDTDRIIPARFLRCV-----TFDGLGEQVFADDRAQLKGQHPFDQPQYQGAKILV 68
Query: 136 AGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG 178
NFGCGSSREHAP A+ G A+V ES+A IF N +A G
Sbjct: 69 VNANFGCGSSREHAPQAIIRWGIQAIVGESFAEIFLGNCIANG 111
>gi|406934282|gb|EKD68628.1| hypothetical protein ACD_47C00511G0003 [uncultured bacterium]
Length = 166
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 60/107 (56%), Gaps = 12/107 (11%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G GDN+DTD I P YL +P +K+ YA G ++ + +
Sbjct: 7 GRVLKFGDNVDTDIIYPGGYLK--ERDP---KKMAEYAFEGFEKGFSKKIQPGD------ 55
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG 178
II+AG NFGCGSSRE A L A G +A+VA+S++RI+FRN++ G
Sbjct: 56 -IIVAGKNFGCGSSREQAATCLKALGVAAIVAKSFSRIYFRNAINQG 101
>gi|448571020|ref|ZP_21639531.1| 3-isopropylmalate dehydratase small subunit [Haloferax lucentense
DSM 14919]
gi|445722938|gb|ELZ74589.1| 3-isopropylmalate dehydratase small subunit [Haloferax lucentense
DSM 14919]
Length = 202
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 61/112 (54%), Gaps = 20/112 (17%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETK------- 128
+ G++IDTDQIIPA ++ +V ++ LG +A + R+ + +E K
Sbjct: 18 IRGNDIDTDQIIPARFMKVVT-----FDGLGEFAF------FDQRYDENDEPKDHPMNEP 66
Query: 129 --TKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG 178
I++ NFGCGSSREHAP AL G A+V ES+A IF N +A G
Sbjct: 67 QFQDASIMVVNANFGCGSSREHAPQALMRWGIDAIVGESFAEIFAGNCLALG 118
>gi|84622515|ref|YP_449887.1| isopropylmalate isomerase small subunit [Xanthomonas oryzae pv.
oryzae MAFF 311018]
gi|161899011|ref|YP_199576.2| isopropylmalate isomerase small subunit [Xanthomonas oryzae pv.
oryzae KACC 10331]
gi|188578498|ref|YP_001915427.1| isopropylmalate isomerase small subunit [Xanthomonas oryzae pv.
oryzae PXO99A]
gi|85540705|sp|Q5H4D0.2|LEUD_XANOR RecName: Full=3-isopropylmalate dehydratase small subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|123523040|sp|Q2P764.1|LEUD_XANOM RecName: Full=3-isopropylmalate dehydratase small subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|226736088|sp|B2SNH3.1|LEUD_XANOP RecName: Full=3-isopropylmalate dehydratase small subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|84366455|dbj|BAE67613.1| 3-isopropylmalate dehydratase small subunit [Xanthomonas oryzae pv.
oryzae MAFF 311018]
gi|188522950|gb|ACD60895.1| 3-isopropylmalate dehydratase, small subunit [Xanthomonas oryzae
pv. oryzae PXO99A]
Length = 215
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 81/157 (51%), Gaps = 22/157 (14%)
Query: 80 NIDTDQIIPAEYLTLV------PSNPDEYEKLGSYALIGLPA-TYTTR-----FIDENET 127
N+DTDQIIP ++L + P+ DE+ Y IG P +TR F+
Sbjct: 18 NVDTDQIIPKQFLKSIKRTGFGPNLFDEWR----YLDIGEPGRDNSTRPLNPEFVLNFPR 73
Query: 128 KTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEA 187
+++A NFGCGSSREHAP AL G AV+A S+A IF+ NS G + + +EA
Sbjct: 74 YQGASVLLARENFGCGSSREHAPWALDEYGFRAVIAPSFADIFYNNSFKNGLLPIVLAEA 133
Query: 188 R---LCEEC--STGDVVTIEIAESRLINHTTGKEYKL 219
L E+C + G +T+++A R + G EY
Sbjct: 134 EVDALFEQCLANEGYQLTVDLAAQR-VRRPDGVEYSF 169
>gi|433423801|ref|ZP_20406319.1| 3-isopropylmalate dehydratase small subunit [Haloferax sp. BAB2207]
gi|448595916|ref|ZP_21653363.1| 3-isopropylmalate dehydratase small subunit [Haloferax alexandrinus
JCM 10717]
gi|432198259|gb|ELK54561.1| 3-isopropylmalate dehydratase small subunit [Haloferax sp. BAB2207]
gi|445742370|gb|ELZ93865.1| 3-isopropylmalate dehydratase small subunit [Haloferax alexandrinus
JCM 10717]
Length = 202
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 61/112 (54%), Gaps = 20/112 (17%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETK------- 128
+ G++IDTDQIIPA ++ +V ++ LG +A + R+ + +E K
Sbjct: 18 IRGNDIDTDQIIPARFMKVVT-----FDGLGEFAF------FDQRYDENDEPKDHPMNEP 66
Query: 129 --TKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG 178
I++ NFGCGSSREHAP AL G A+V ES+A IF N +A G
Sbjct: 67 QFQDASIMVVNANFGCGSSREHAPQALMRWGIDAIVGESFAEIFAGNCLALG 118
>gi|418966609|ref|ZP_13518335.1| 3-isopropylmalate dehydratase, small subunit [Streptococcus mitis
SK616]
gi|383346819|gb|EID24833.1| 3-isopropylmalate dehydratase, small subunit [Streptococcus mitis
SK616]
Length = 197
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 72/139 (51%), Gaps = 8/139 (5%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTR--FIDENETKTKYKI 133
++ DNIDTDQI+P ++L L+ + K YA L YT F+ K I
Sbjct: 14 LMNDNIDTDQILPKQFLKLIDKKG--FGKYLMYAWRYLDDLYTEDPDFVFNRPEYRKASI 71
Query: 134 IIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGE---IYPLDSEARLC 190
+I+G NFG GSSREHA AL G V+A S+ I + N + G I P + +L
Sbjct: 72 LISGDNFGAGSSREHAAWALADYGFKVVIAGSFGDIHYNNELNNGMLPIIQPREVREKLA 131
Query: 191 EECSTGDVVTIEIAESRLI 209
+ T D VT+++ + ++I
Sbjct: 132 QLKPT-DQVTVDLEQQKII 149
>gi|384920934|ref|ZP_10020931.1| isopropylmalate isomerase small subunit [Citreicella sp. 357]
gi|384465273|gb|EIE49821.1| isopropylmalate isomerase small subunit [Citreicella sp. 357]
Length = 201
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 80/156 (51%), Gaps = 27/156 (17%)
Query: 80 NIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY-------- 131
NIDTD IIP ++L + + +G+ A R++D+ ++
Sbjct: 18 NIDTDMIIPKQFLKTIKRSG-----------LGVHAFDEMRYLDDGSENPEFVLNQPAYR 66
Query: 132 --KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGE---IYPLDSE 186
++IIAG NFGCGSSREHAP AL G AVV+ S+A IF+ N G + P D+
Sbjct: 67 DAQVIIAGDNFGCGSSREHAPWALADFGIKAVVSTSFADIFYNNCFKNGMLPIVLPQDAV 126
Query: 187 ARLCEECSTG--DVVTIEIAESRLINHTTGKEYKLK 220
L ++ G +T+++ E +++ + G+++ +
Sbjct: 127 DVLMKDAEKGANARMTVDL-EDQVVTTSDGEQFSFE 161
>gi|440721632|ref|ZP_20902027.1| isopropylmalate isomerase small subunit [Pseudomonas syringae
BRIP34876]
gi|440724679|ref|ZP_20904957.1| isopropylmalate isomerase small subunit [Pseudomonas syringae
BRIP34881]
gi|443644486|ref|ZP_21128336.1| 3-isopropylmalate isomerase, small subunit [Pseudomonas syringae
pv. syringae B64]
gi|440362932|gb|ELQ00108.1| isopropylmalate isomerase small subunit [Pseudomonas syringae
BRIP34876]
gi|440369668|gb|ELQ06631.1| isopropylmalate isomerase small subunit [Pseudomonas syringae
BRIP34881]
gi|443284503|gb|ELS43508.1| 3-isopropylmalate isomerase, small subunit [Pseudomonas syringae
pv. syringae B64]
Length = 213
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 59/111 (53%), Gaps = 16/111 (14%)
Query: 80 NIDTDQIIPAEYLTLV------PSNPDEYEKLGSYALIGLPAT------YTTRFIDENET 127
N+DTDQIIP ++L + P+ DE+ Y +G P T F+ +E
Sbjct: 18 NVDTDQIIPKQFLKSIKRTGFGPNLFDEWR----YLDVGQPYQDNSKRPLNTDFVLNHER 73
Query: 128 KTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG 178
+++A NFGCGSSREHAP AL G A++A SYA IFF NS G
Sbjct: 74 YQGASVLLARENFGCGSSREHAPWALEEYGFCAIIAPSYADIFFNNSFKNG 124
>gi|422668339|ref|ZP_16728196.1| isopropylmalate isomerase small subunit [Pseudomonas syringae pv.
aptata str. DSM 50252]
gi|330980705|gb|EGH78808.1| isopropylmalate isomerase small subunit [Pseudomonas syringae pv.
aptata str. DSM 50252]
Length = 213
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 59/111 (53%), Gaps = 16/111 (14%)
Query: 80 NIDTDQIIPAEYLTLV------PSNPDEYEKLGSYALIGLPAT------YTTRFIDENET 127
N+DTDQIIP ++L + P+ DE+ Y +G P T F+ +E
Sbjct: 18 NVDTDQIIPKQFLKSIKRTGFGPNLFDEWR----YLDVGQPYQDNSKRPLNTDFVLNHER 73
Query: 128 KTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG 178
+++A NFGCGSSREHAP AL G A++A SYA IFF NS G
Sbjct: 74 YQGASVLLARENFGCGSSREHAPWALEEYGFCAIIAPSYADIFFNNSFKNG 124
>gi|292655655|ref|YP_003535552.1| 3-isopropylmalate dehydratase small subunit [Haloferax volcanii
DS2]
gi|448291738|ref|ZP_21482443.1| 3-isopropylmalate dehydratase small subunit [Haloferax volcanii
DS2]
gi|32261035|emb|CAE00174.1| 3-isopropylmalate dehydratase small subunit [Haloferax volcanii]
gi|291372633|gb|ADE04860.1| 3-isopropylmalate dehydratase small subunit [Haloferax volcanii
DS2]
gi|445573743|gb|ELY28259.1| 3-isopropylmalate dehydratase small subunit [Haloferax volcanii
DS2]
Length = 202
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 61/112 (54%), Gaps = 20/112 (17%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETK------- 128
+ G++IDTDQIIPA ++ +V ++ LG +A + R+ + +E K
Sbjct: 18 IRGNDIDTDQIIPARFMKVVT-----FDGLGEFAF------FDQRYDENDEPKDHPLNEP 66
Query: 129 --TKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG 178
I++ NFGCGSSREHAP AL G A+V ES+A IF N +A G
Sbjct: 67 QFQDASIMVVNANFGCGSSREHAPQALMRWGIDAIVGESFAEIFAGNCLALG 118
>gi|417941232|ref|ZP_12584519.1| 3-isopropylmalate dehydratase, small subunit [Streptococcus oralis
SK313]
gi|343388525|gb|EGV01111.1| 3-isopropylmalate dehydratase, small subunit [Streptococcus oralis
SK313]
Length = 197
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 74/148 (50%), Gaps = 26/148 (17%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT------ 129
++ DNIDTDQI+P ++L L+ + G Y + Y R++D+ T+
Sbjct: 14 LMNDNIDTDQILPKQFLKLIDK-----KGFGKYLM------YAWRYLDDKYTEDPDFVFN 62
Query: 130 -----KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGE---IY 181
K I+I+G NFG GSSREHA AL G V+A S+ I + N + G +
Sbjct: 63 RPEYRKASILISGDNFGAGSSREHAAWALADYGFKVVIAGSFGDIHYNNELNNGMLPIVQ 122
Query: 182 PLDSEARLCEECSTGDVVTIEIAESRLI 209
P + +L + D +T+++ + ++I
Sbjct: 123 PREVREKLA-QLQPSDQITVDLEQQKII 149
>gi|306829624|ref|ZP_07462814.1| 3-isopropylmalate dehydratase small subunit [Streptococcus mitis
ATCC 6249]
gi|304428710|gb|EFM31800.1| 3-isopropylmalate dehydratase small subunit [Streptococcus mitis
ATCC 6249]
Length = 197
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 77/148 (52%), Gaps = 26/148 (17%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENET-------- 127
++ DNIDTDQI+P ++L L+ + G Y + Y R++D+ T
Sbjct: 14 LMNDNIDTDQILPKQFLKLIDK-----KGFGKYLM------YAWRYLDDKYTEDPDFVFN 62
Query: 128 KTKYK---IIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGE---IY 181
+ +Y+ I+I+G NFG GSSREHA AL G V+A S+ I + N + G +
Sbjct: 63 RPEYRNASILISGDNFGAGSSREHAAWALADYGFKVVIAGSFGDIHYNNELNNGMLPIVQ 122
Query: 182 PLDSEARLCEECSTGDVVTIEIAESRLI 209
P + +L + T D VT+++ + ++I
Sbjct: 123 PREVREKLAQLQPT-DQVTVDLEQQKII 149
>gi|448603089|ref|ZP_21656910.1| 3-isopropylmalate dehydratase small subunit [Haloferax
sulfurifontis ATCC BAA-897]
gi|445746285|gb|ELZ97747.1| 3-isopropylmalate dehydratase small subunit [Haloferax
sulfurifontis ATCC BAA-897]
Length = 202
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 63/113 (55%), Gaps = 22/113 (19%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY---- 131
+ G++IDTDQIIPA ++ +V ++ LG +A + R+ DEN+ ++
Sbjct: 18 IRGNDIDTDQIIPARFMKVVT-----FDGLGEFAF------FDQRY-DENDEPKEHPLNE 65
Query: 132 ------KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG 178
I++ NFGCGSSREHAP AL G A++ ES+A IF N +A G
Sbjct: 66 PQFQDASIMVVNANFGCGSSREHAPQALMRWGIDAIIGESFAEIFAGNCLALG 118
>gi|417848453|ref|ZP_12494398.1| 3-isopropylmalate dehydratase, small subunit [Streptococcus mitis
SK1073]
gi|339452667|gb|EGP65290.1| 3-isopropylmalate dehydratase, small subunit [Streptococcus mitis
SK1073]
Length = 197
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 83/170 (48%), Gaps = 36/170 (21%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT------ 129
++ DNIDTDQI+P ++L L+ + G Y + Y R++D+ T+
Sbjct: 14 LMNDNIDTDQILPKQFLKLIDK-----KGFGKYLM------YAWRYLDDKYTEDPDFVFN 62
Query: 130 -----KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGE---IY 181
K I+I+G NFG GSSREHA AL G V+A S+ I + N + G +
Sbjct: 63 RPEYRKASILISGDNFGAGSSREHAAWALSDYGFKVVIAGSFGDIHYNNELNNGMLPIVQ 122
Query: 182 PLDSEARLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLGPVIDA 231
P + +L + T D VT+++ + ++I+ P+G+ ID+
Sbjct: 123 PREVREKLAQLRPT-DQVTVDLEQQKIIS----------PVGEFTFEIDS 161
>gi|91762619|ref|ZP_01264584.1| 3-isopropylmalate dehydratase [Candidatus Pelagibacter ubique
HTCC1002]
gi|91718421|gb|EAS85071.1| 3-isopropylmalate dehydratase [Candidatus Pelagibacter ubique
HTCC1002]
Length = 211
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 78/155 (50%), Gaps = 24/155 (15%)
Query: 80 NIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDE-NETK---------T 129
NIDTD IIP ++L + ++ G +G + R+ D NE K
Sbjct: 26 NIDTDMIIPKQFLKTI-------KRTG----LGKNLFFEMRYDDNGNEIKDFILNQKPHN 74
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEI---YPLDSE 186
+ KI+IAG NFGCGSSREHAP AL G + V++ SYA IF+ N G + P +
Sbjct: 75 QSKILIAGKNFGCGSSREHAPWALLDFGITCVISSSYADIFYSNCFKNGILPITLPEEKI 134
Query: 187 ARLCEECSTGDVVTIEIAESRLINHTTGKEYKLKP 221
L E + ++I++ E ++I + ++ + P
Sbjct: 135 KELSEYSKRKEEISIDLNEEKIIFGNSEIKFDIDP 169
>gi|448562250|ref|ZP_21635289.1| 3-isopropylmalate dehydratase small subunit [Haloferax prahovense
DSM 18310]
gi|445719454|gb|ELZ71134.1| 3-isopropylmalate dehydratase small subunit [Haloferax prahovense
DSM 18310]
Length = 202
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 63/113 (55%), Gaps = 22/113 (19%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY---- 131
+ G++IDTDQIIPA ++ +V ++ LG +A + R+ DEN+ ++
Sbjct: 18 IRGNDIDTDQIIPARFMKVVT-----FDGLGEFAF------FDQRY-DENDEPKEHPMNE 65
Query: 132 ------KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG 178
I++ NFGCGSSREHAP AL G A++ ES+A IF N +A G
Sbjct: 66 PQFQDAAIMVVNANFGCGSSREHAPQALMRWGIDAIIGESFAEIFAGNCLALG 118
>gi|385675151|ref|ZP_10049079.1| 3-isopropylmalate dehydratase, small subunit [Amycolatopsis sp.
ATCC 39116]
Length = 164
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 62/109 (56%), Gaps = 12/109 (11%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G V GD+++TD IIP YL + + E+LG +A L D E +
Sbjct: 8 GAPIVFGDDVNTDVIIPGRYLVSI-----DPEELGEHAFEPLGP-------DVQEHLRRS 55
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEI 180
+++AG NFGCGS+RE A L AG AVVA S++R+FFRN++ TG I
Sbjct: 56 DVVVAGRNFGCGSAREQAASCLIGAGIKAVVAASFSRVFFRNAINTGLI 104
>gi|445378603|ref|ZP_21426816.1| isopropylmalate isomerase small subunit [Streptococcus thermophilus
MTCC 5460]
gi|445392754|ref|ZP_21428541.1| isopropylmalate isomerase small subunit [Streptococcus thermophilus
MTCC 5461]
gi|444749493|gb|ELW74388.1| isopropylmalate isomerase small subunit [Streptococcus thermophilus
MTCC 5461]
gi|444749697|gb|ELW74585.1| isopropylmalate isomerase small subunit [Streptococcus thermophilus
MTCC 5460]
Length = 196
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 86/182 (47%), Gaps = 38/182 (20%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT------ 129
++ DNIDTDQI+P ++L L+ + G Y + Y+ R+ D T+
Sbjct: 14 LMNDNIDTDQILPKQFLKLIDK-----KGFGKYLM------YSWRYKDNKYTEDPDFVFN 62
Query: 130 -----KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGE---IY 181
K I+I G NFG GSSREHA AL G V+A S+ I + N + G +
Sbjct: 63 RPEYRKATILITGDNFGAGSSREHAAWALADYGFKVVIAGSFGDIHYNNELNNGMLPIVQ 122
Query: 182 PLDSEARLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLGPVIDAGGIFAYARKT 241
P++ +L E+ D VT+++ + ++I+ P+G+ ID G + Y
Sbjct: 123 PIEVRRKL-EQLKPTDEVTVDLEQQKIIS----------PVGEFTFEID--GEWKYKLLN 169
Query: 242 GM 243
G+
Sbjct: 170 GL 171
>gi|395799343|ref|ZP_10478624.1| isopropylmalate isomerase small subunit [Pseudomonas sp. Ag1]
gi|421140443|ref|ZP_15600453.1| isopropylmalate isomerase small subunit [Pseudomonas fluorescens
BBc6R8]
gi|395336447|gb|EJF68307.1| isopropylmalate isomerase small subunit [Pseudomonas sp. Ag1]
gi|404508364|gb|EKA22324.1| isopropylmalate isomerase small subunit [Pseudomonas fluorescens
BBc6R8]
Length = 214
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 80/158 (50%), Gaps = 22/158 (13%)
Query: 80 NIDTDQIIPAEYLTLV------PSNPDEYEKLGSYALIGLPATYTTR------FIDENET 127
N+DTDQIIP ++L + P+ DE+ Y +G ++ F+ E
Sbjct: 18 NVDTDQIIPKQFLKSIKRTGFGPNLFDEWR----YLDVGYAYQDNSKRPLNKDFVLNAER 73
Query: 128 KTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEA 187
+++A NFGCGSSREHAP AL G +++A SYA IFF NS G + + S+A
Sbjct: 74 YQGASVLLARENFGCGSSREHAPWALEEYGFRSIIAPSYADIFFNNSFKNGLLPIILSDA 133
Query: 188 RLCE-----ECSTGDVVTIEIAESRLINHTTGKEYKLK 220
+ E E G +TI++A ++ + GK Y +
Sbjct: 134 EVDELFQQVEADVGYQLTIDLA-AQTVTRPDGKVYHFE 170
>gi|182414496|ref|YP_001819562.1| isopropylmalate isomerase small subunit [Opitutus terrae PB90-1]
gi|177841710|gb|ACB75962.1| 3-isopropylmalate dehydratase, small subunit [Opitutus terrae
PB90-1]
Length = 201
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/107 (42%), Positives = 64/107 (59%), Gaps = 8/107 (7%)
Query: 75 YVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLP--ATYTTRFIDENETKTK-Y 131
+V G++IDTD+IIPA ++ V ++ LG + + A T + NE + K
Sbjct: 15 HVPGNDIDTDRIIPARFMKCV-----TFDGLGEFLFYDVRKNADGTDKPHPLNEPRFKGA 69
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG 178
I+++G NFGCGSSREHAP A+ G AV+AE++A IFF NS G
Sbjct: 70 SILLSGSNFGCGSSREHAPQAIQKYGLKAVIAENFAEIFFGNSTGLG 116
>gi|339478131|ref|YP_004706950.1| isopropylmalate isomerase small subunit [Candidatus Tremblaya
princeps PCIT]
gi|409191159|ref|YP_006884288.1| 3-isopropylmalate dehydratase, small subunit [Candidatus Tremblaya
princeps PCVAL]
gi|338172153|gb|AEI75082.1| isopropylmalate isomerase small subunit [Candidatus Tremblaya
princeps PCIT]
gi|340536483|gb|AEK38481.1| 3-isopropylmalate dehydratase, small subunit [Candidatus Tremblaya
princeps PCVAL]
Length = 202
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/140 (36%), Positives = 73/140 (52%), Gaps = 14/140 (10%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKIII 135
++ DNIDTD IIP ++L+ E LG Y RF + +K +++
Sbjct: 13 LMRDNIDTDVIIPKQFLSC-----SGREGLGRYLFN--EWRRCNRFGACSPWHSKATVLL 65
Query: 136 AGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYP------LDSEARL 189
+G NFGCGSSREHA AL G +A+VA S+A IF N + G I P L SEA L
Sbjct: 66 SGANFGCGSSREHAVWALSRHGYAAIVASSFAEIFHLNCIRNG-ILPIPLGIHLASEAAL 124
Query: 190 CEECSTGDVVTIEIAESRLI 209
C+ V +++ +R++
Sbjct: 125 ISCCAARRSVHVDLVGARVV 144
>gi|254432628|ref|ZP_05046331.1| 3-isopropylmalate dehydratase, small subunit [Cyanobium sp. PCC
7001]
gi|197627081|gb|EDY39640.1| 3-isopropylmalate dehydratase, small subunit [Cyanobium sp. PCC
7001]
Length = 220
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/114 (41%), Positives = 59/114 (51%), Gaps = 6/114 (5%)
Query: 66 PTATFHGLCYVV-GDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDE 124
P T G VV GD+IDTD+IIPA +L V +E LG A + +
Sbjct: 12 PIITISGTAVVVRGDDIDTDRIIPARFLRCV-----TFEGLGEQVFADDRAELQGQHPFD 66
Query: 125 NETKTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG 178
+++ NFGCGSSREHAP AL G AVV ES+A IF+ N +A G
Sbjct: 67 RPEHQGANLLLVNRNFGCGSSREHAPQALMRWGIRAVVGESFAEIFYGNCLALG 120
>gi|335436270|ref|ZP_08559070.1| 3-isopropylmalate dehydratase, small subunit [Halorhabdus tiamatea
SARL4B]
gi|334897952|gb|EGM36076.1| 3-isopropylmalate dehydratase, small subunit [Halorhabdus tiamatea
SARL4B]
Length = 204
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 61/112 (54%), Gaps = 20/112 (17%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETK------- 128
+ G++IDTDQIIPA ++ +V ++ LG +A + R+ D++ K
Sbjct: 21 IRGNDIDTDQIIPARFMKVVT-----FDGLGQFAF------FDVRYDDDDNQKDHPMNED 69
Query: 129 --TKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG 178
+ +++ NFGCGSSREHAP AL G A + ES+A IF N +A G
Sbjct: 70 RFSDANVMVVNDNFGCGSSREHAPQALMRWGIDAFIGESFAEIFAGNCLALG 121
>gi|149173192|ref|ZP_01851823.1| isopropylmalate isomerase small subunit [Planctomyces maris DSM
8797]
gi|148847998|gb|EDL62330.1| isopropylmalate isomerase small subunit [Planctomyces maris DSM
8797]
Length = 196
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/100 (44%), Positives = 57/100 (57%), Gaps = 6/100 (6%)
Query: 79 DNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKIIIAGG 138
D+IDTD+IIPA +L V +E LG +A D+ E + I++ G
Sbjct: 17 DDIDTDRIIPARFLRCVT-----FEGLGEHAFEDDRIQDPEHPFDKPEYQDA-SILVGGR 70
Query: 139 NFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG 178
NFGCGSSREHAP +L G A++AESYA IFF N + G
Sbjct: 71 NFGCGSSREHAPQSLIRWGIQAIIAESYAEIFFGNCTSLG 110
>gi|402839415|ref|ZP_10887905.1| 3-isopropylmalate dehydratase, small subunit [Eubacteriaceae
bacterium OBRC8]
gi|402270317|gb|EJU19584.1| 3-isopropylmalate dehydratase, small subunit [Eubacteriaceae
bacterium OBRC8]
Length = 190
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 74/157 (47%), Gaps = 19/157 (12%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSN--------PDEYEKLGSYALIGLPATYTTRFIDENET 127
++ DNIDTD +IP YL V P Y+K G+ F+ E
Sbjct: 14 ILNDNIDTDILIPKNYLKSVKRTGFGDFVFAPWRYDKDGNK---------IKDFVLNQEK 64
Query: 128 KTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEI-YPLDSE 186
I+I G NFGCGSSREHA AL G ++A Y+ IF+ N + G + LDSE
Sbjct: 65 YADASILITGENFGCGSSREHAAWALQDFGIRVIIAGGYSDIFYNNWLNNGNVAIKLDSE 124
Query: 187 AR-LCEECSTGDVVTIEIAESRLINHTTGKEYKLKPI 222
R + E + G + I++ ++++ +++ I
Sbjct: 125 KRKMLSEIADGKEIEIDLINQKILSGNLSIDFEFPEI 161
>gi|86609470|ref|YP_478232.1| isopropylmalate isomerase small subunit [Synechococcus sp.
JA-2-3B'a(2-13)]
gi|86558012|gb|ABD02969.1| 3-isopropylmalate dehydratase, small subunit [Synechococcus sp.
JA-2-3B'a(2-13)]
Length = 200
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 58/103 (56%), Gaps = 5/103 (4%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKYKIII 135
++G++IDTD+IIPA +L V ++ LG + A + + +I++
Sbjct: 15 LLGNDIDTDRIIPARFLKCV-----TFDGLGQHVFADDRAQDPGQHPFDQPQYQGSQILV 69
Query: 136 AGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG 178
NFGCGSSREHAP AL G A++ ES+A IFF N +A G
Sbjct: 70 VNANFGCGSSREHAPQALAKWGIRALIGESFAEIFFGNCLALG 112
>gi|395499486|ref|ZP_10431065.1| isopropylmalate isomerase small subunit [Pseudomonas sp. PAMC
25886]
Length = 214
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 80/158 (50%), Gaps = 22/158 (13%)
Query: 80 NIDTDQIIPAEYLTLV------PSNPDEYEKLGSYALIGLPATYTTR------FIDENET 127
N+DTDQIIP ++L + P+ DE+ Y +G ++ F+ E
Sbjct: 18 NVDTDQIIPKQFLKSIKRTGFGPNLFDEWR----YLDVGYAYQDNSKRPLNKDFVLNAER 73
Query: 128 KTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEA 187
+++A NFGCGSSREHAP AL G +++A SYA IFF NS G + + S+A
Sbjct: 74 YQGASVLLARENFGCGSSREHAPWALEEYGFRSIIAPSYADIFFNNSFKNGLLPIILSDA 133
Query: 188 RLCE-----ECSTGDVVTIEIAESRLINHTTGKEYKLK 220
+ E E G +TI++A ++ + GK Y +
Sbjct: 134 EVDELFQQVEADVGYQLTIDLA-AQTVTRPDGKVYHFE 170
>gi|358465050|ref|ZP_09175007.1| 3-isopropylmalate dehydratase, small subunit [Streptococcus sp.
oral taxon 058 str. F0407]
gi|357066124|gb|EHI76282.1| 3-isopropylmalate dehydratase, small subunit [Streptococcus sp.
oral taxon 058 str. F0407]
Length = 197
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 74/148 (50%), Gaps = 26/148 (17%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT------ 129
++ DNIDTDQI+P ++L L+ + G Y + Y R++D+ T+
Sbjct: 14 LMNDNIDTDQILPKQFLKLIDK-----KGFGKYLM------YAWRYLDDKYTEDPDFVFN 62
Query: 130 -----KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGE---IY 181
K I+I+G NFG GSSREHA AL G V+A S+ I + N + G +
Sbjct: 63 RPEYRKASILISGDNFGAGSSREHAAWALTDYGFKVVIAGSFGDIHYNNELNNGMLPIVQ 122
Query: 182 PLDSEARLCEECSTGDVVTIEIAESRLI 209
P + +L + D VT+++ + ++I
Sbjct: 123 PREVREKLA-QLQPSDQVTVDLEQQKII 149
>gi|71082957|ref|YP_265676.1| 3-isopropylmalate dehydratase [Candidatus Pelagibacter ubique
HTCC1062]
gi|85540692|sp|Q4FP16.1|LEUD_PELUB RecName: Full=3-isopropylmalate dehydratase small subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|71062070|gb|AAZ21073.1| 3-isopropylmalate dehydratase [Candidatus Pelagibacter ubique
HTCC1062]
Length = 203
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 78/155 (50%), Gaps = 24/155 (15%)
Query: 80 NIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDE-NETK---------T 129
NIDTD IIP ++L + ++ G +G + R+ D NE K
Sbjct: 18 NIDTDMIIPKQFLKTI-------KRTG----LGKNLFFEMRYDDNGNEIKDFILNQKPHN 66
Query: 130 KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEI---YPLDSE 186
+ KI+IAG NFGCGSSREHAP AL G + V++ SYA IF+ N G + P +
Sbjct: 67 QSKILIAGKNFGCGSSREHAPWALLDFGITCVISSSYADIFYSNCFKNGILPITLPEEKI 126
Query: 187 ARLCEECSTGDVVTIEIAESRLINHTTGKEYKLKP 221
L E + ++I++ E ++I + ++ + P
Sbjct: 127 KELSEYSKRKEEISIDLNEEKIIFGNSEIKFDIDP 161
>gi|66045224|ref|YP_235065.1| isopropylmalate isomerase small subunit [Pseudomonas syringae pv.
syringae B728a]
gi|75502481|sp|Q4ZUZ5.1|LEUD_PSEU2 RecName: Full=3-isopropylmalate dehydratase small subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|63255931|gb|AAY37027.1| 3-isopropylmalate dehydratase, small subunit [Pseudomonas syringae
pv. syringae B728a]
Length = 213
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 80/153 (52%), Gaps = 22/153 (14%)
Query: 80 NIDTDQIIPAEYLTLV------PSNPDEYEKLGSYALIGLPATYTTR------FIDENET 127
N+DTDQIIP ++L + P+ DE+ Y +G P ++ F+ +E
Sbjct: 18 NVDTDQIIPKQFLKSIKRTGFGPNLFDEWR----YLDVGQPYQDNSKRPLNPDFVLNHER 73
Query: 128 KTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEA 187
+++A NFGCGSSREHAP AL G A++A SYA IFF NS G + + SE
Sbjct: 74 YQGASVLLARENFGCGSSREHAPWALEEYGFCAIIAPSYADIFFNNSFKNGLLPIILSEE 133
Query: 188 RLCE-----ECSTGDVVTIEIAESRLINHTTGK 215
+ + E S G ++I++ +++ + GK
Sbjct: 134 DVDQLFKQVEASPGYQLSIDL-QAQTVTRPDGK 165
>gi|406982235|gb|EKE03580.1| 3-isopropylmalate dehydratase small subunit [uncultured bacterium]
Length = 166
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 84/177 (47%), Gaps = 26/177 (14%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G + GD+I TD I P L + P E+ K + L + +
Sbjct: 5 GKAWKFGDDISTDHIAPGRLFHLRTNLP-EFAK---HVLEDANPDFAPNM-------SPG 53
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
++AG NFG GSSREHAP + AG + V+A+S+ARIFFRN++ G L
Sbjct: 54 DFVVAGRNFGLGSSREHAPTIIKLAGVNGVLAKSFARIFFRNAINIG---------LLAI 104
Query: 192 ECST-----GDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARKTG 242
EC+T D + +++ + N T G E + P+ D + +++ GG+ + K G
Sbjct: 105 ECNTDKINQDDEIEVDLENGIVKNLTQGSEIPITPLPDVMIKILNEGGLAKHIEKHG 161
>gi|421526634|ref|ZP_15973241.1| 3-isopropylmalate dehydratase small subunit [Fusobacterium
nucleatum ChDC F128]
gi|402257191|gb|EJU07666.1| 3-isopropylmalate dehydratase small subunit [Fusobacterium
nucleatum ChDC F128]
Length = 191
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/151 (37%), Positives = 77/151 (50%), Gaps = 19/151 (12%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDE---NETKTKYK 132
++ DNIDTDQ+IP +YL EK G + Y D N K +YK
Sbjct: 14 IMNDNIDTDQLIPKQYLKST-------EKTGFGKYLFDEWRYNEDGSDNLNFNLNKAEYK 66
Query: 133 ---IIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
I+I G NFGCGSSREHA AL G +VA Y+ IF+ N + G + P+
Sbjct: 67 KGTILITGENFGCGSSREHAAWALQDYGFHVIVAGGYSGIFYMNWLNNGHL-PITLPKED 125
Query: 190 CEECS--TGD-VVTIEIAESRLINHTTGKEY 217
+E S +GD VVT+++ ++L GK+Y
Sbjct: 126 RDELSKLSGDIVVTVDLENNKL--SANGKDY 154
>gi|262067296|ref|ZP_06026908.1| 3-isopropylmalate dehydratase, small subunit [Fusobacterium
periodonticum ATCC 33693]
gi|291378994|gb|EFE86512.1| 3-isopropylmalate dehydratase, small subunit [Fusobacterium
periodonticum ATCC 33693]
Length = 193
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/151 (36%), Positives = 78/151 (51%), Gaps = 19/151 (12%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDE---NETKTKYK 132
++ DNIDTDQ+IP +YL EK G + Y D N K++YK
Sbjct: 14 IMNDNIDTDQLIPKQYLKST-------EKTGFGKYLFDEWRYNEDGSDNLNFNLNKSEYK 66
Query: 133 ---IIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARL 189
I+I G NFGCGSSREHA AL G +VA Y+ IF+ N + G + P+
Sbjct: 67 KGTILITGENFGCGSSREHAAWALQDYGFHVIVAGGYSGIFYMNWLNNGHL-PITLPKED 125
Query: 190 CEECS--TGD-VVTIEIAESRLINHTTGKEY 217
+E S +GD V+T+++ ++L GK+Y
Sbjct: 126 RDELSKLSGDTVITVDLENNKL--SANGKDY 154
>gi|448313489|ref|ZP_21503207.1| 3-isopropylmalate dehydratase small subunit [Natronolimnobius
innermongolicus JCM 12255]
gi|445598336|gb|ELY52397.1| 3-isopropylmalate dehydratase small subunit [Natronolimnobius
innermongolicus JCM 12255]
Length = 214
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 63/110 (57%), Gaps = 20/110 (18%)
Query: 78 GDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT------KY 131
G++IDTDQIIPA ++ +V ++ LG +A + RF +++ K +Y
Sbjct: 25 GNDIDTDQIIPARFMKVVT-----FDGLGEFAF------FDVRFDEDDNQKDHPFNEDRY 73
Query: 132 K---IIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG 178
+ +++ NFGCGSSREHAP +L G A++ ES+A IF N +A G
Sbjct: 74 QDSSVLVVNSNFGCGSSREHAPQSLMRWGIDAIIGESFAEIFAGNCLALG 123
>gi|325188996|emb|CCA23525.1| unnamed protein product [Albugo laibachii Nc14]
Length = 684
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 57/107 (53%), Gaps = 11/107 (10%)
Query: 67 TATFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENE 126
T + G + GDNIDTD I+P EYLT ++ EKLG A + + +
Sbjct: 483 TDSITGRVQLFGDNIDTDAILPGEYLT-----ENDIEKLGKVAFLHTNPDF------RGK 531
Query: 127 TKTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRN 173
K +I+AG FGCGSSRE A AL AG A++A S+ IF RN
Sbjct: 532 VKNGQTVIVAGHGFGCGSSREQAVTALKGAGVHAIIARSFGYIFSRN 578
>gi|322387943|ref|ZP_08061550.1| 3-isopropylmalate dehydratase small subunit [Streptococcus infantis
ATCC 700779]
gi|419842807|ref|ZP_14366140.1| 3-isopropylmalate dehydratase, small subunit [Streptococcus
infantis ATCC 700779]
gi|321141216|gb|EFX36714.1| 3-isopropylmalate dehydratase small subunit [Streptococcus infantis
ATCC 700779]
gi|385703484|gb|EIG40601.1| 3-isopropylmalate dehydratase, small subunit [Streptococcus
infantis ATCC 700779]
Length = 195
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 82/170 (48%), Gaps = 36/170 (21%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT------ 129
++ DNIDTDQI+P ++L L+ + G Y + Y R++D+ T+
Sbjct: 14 LMNDNIDTDQILPKQFLKLIDK-----KGFGKYLM------YAWRYLDDKYTEDPDFVFN 62
Query: 130 -----KYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGE---IY 181
K I+I G NFG GSSREHA AL G V+A S+ I + N + G +
Sbjct: 63 RPEYRKATILITGDNFGAGSSREHAAWALADYGFKVVIAGSFGDIHYNNELNNGMLPIVQ 122
Query: 182 PLDSEARLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLGPVIDA 231
P + +L + T D VT+++ + ++I+ P+G+ ID+
Sbjct: 123 PREVREKLAQIQPT-DQVTVDLEQQKIIS----------PVGEFSFEIDS 161
>gi|239827927|ref|YP_002950551.1| isopropylmalate isomerase small subunit [Geobacillus sp. WCH70]
gi|259494363|sp|C5D5L7.1|LEUD_GEOSW RecName: Full=3-isopropylmalate dehydratase small subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|239808220|gb|ACS25285.1| 3-isopropylmalate dehydratase, small subunit [Geobacillus sp.
WCH70]
Length = 197
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 74/151 (49%), Gaps = 33/151 (21%)
Query: 80 NIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFID-------------ENE 126
NIDTDQIIP ++L + E+ G G Y R+ID ENE
Sbjct: 18 NIDTDQIIPKQFLKRI-------ERTG----FGKFLFYDWRYIDGEKPNPDFELNRPENE 66
Query: 127 TKTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPL--- 183
T I++A NFGCGSSREHAP AL G A++A S+A IF+ N + G + P+
Sbjct: 67 GAT---ILVANENFGCGSSREHAPWALQDYGFQAIIAPSFADIFYNNCLKNG-LLPIRLA 122
Query: 184 --DSEARLCEECSTGDVVTIEIAESRLINHT 212
D E L E +TI + + R+ + +
Sbjct: 123 KQDVEYLLRESTKADYELTISLEDQRVYDDS 153
>gi|395644992|ref|ZP_10432852.1| 3-isopropylmalate dehydratase, small subunit [Methanofollis
liminatans DSM 4140]
gi|395441732|gb|EJG06489.1| 3-isopropylmalate dehydratase, small subunit [Methanofollis
liminatans DSM 4140]
Length = 157
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 80/168 (47%), Gaps = 23/168 (13%)
Query: 72 GLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY 131
G +G +IDTD II YL + ++AL L R
Sbjct: 5 GRAVCLGRDIDTDLIIAGRYL-----RTKDRSVWAAHALEDLDPALAGRL--------SG 51
Query: 132 KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEARLCE 191
+I+AGGNFGCGSSRE A +AL AG AV A S+ARIFFRN+V G P+ CE
Sbjct: 52 AVIVAGGNFGCGSSREQAAIALRDAGVVAVAAPSFARIFFRNAVNIG--LPVLE----CE 105
Query: 192 -ECSTGDVVTIEIAESRLINHTTGKEYKLKPIG-DLGPVIDAGGIFAY 237
C GD VT ++ E + G + P+ + ++ AGG+ +
Sbjct: 106 IPCRDGDQVTFDLEEGWI--EAGGIRRAVSPLSPRMRAILAAGGLVPF 151
>gi|422675776|ref|ZP_16735117.1| isopropylmalate isomerase small subunit [Pseudomonas syringae pv.
aceris str. M302273]
gi|330973491|gb|EGH73557.1| isopropylmalate isomerase small subunit [Pseudomonas syringae pv.
aceris str. M302273]
Length = 213
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 84/163 (51%), Gaps = 23/163 (14%)
Query: 71 HGLCYVVGD-NIDTDQIIPAEYLTLV------PSNPDEYEKLGSYALIGLPATYTTR--- 120
HGL + N+DTDQIIP ++L + P+ DE+ Y +G P ++
Sbjct: 8 HGLVAPLDRANVDTDQIIPKQFLKSIKRTGFGPNLFDEWR----YLDVGQPYQDNSKRPL 63
Query: 121 ---FIDENETKTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVAT 177
F+ +E +++A NFGCGSSREHAP AL G A++A SYA IFF NS
Sbjct: 64 NPDFVLNHERYQGASVLLARENFGCGSSREHAPWALEEYGFCAIIAPSYADIFFNNSFKN 123
Query: 178 GEIYPLDSEARLCE-----ECSTGDVVTIEIAESRLINHTTGK 215
G + + SE + + E S G ++I++ +++ + GK
Sbjct: 124 GLLPIILSEEDVDQLFRQVEASPGYQLSIDL-QAQTVTRPDGK 165
>gi|110590622|pdb|2HCU|A Chain A, Crystal Structure Of Smu.1381 (Or Leud) From Streptococcus
Mutans
Length = 213
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 81/170 (47%), Gaps = 36/170 (21%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKT------ 129
++ DNIDTDQI+P ++L L+ + G Y + Y R++D N T+
Sbjct: 31 LMNDNIDTDQILPKQFLKLIDK-----KGFGKYLM------YEWRYLDNNYTENPDFIFN 79
Query: 130 --KYK---IIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG---EIY 181
+Y+ I+I G NFG GSSREHA AL G +VA S+ I + N + G I
Sbjct: 80 QPEYREASILITGDNFGAGSSREHAAWALADYGFKVIVAGSFGDIHYNNDLNNGILPIIQ 139
Query: 182 PLDSEARLCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGDLGPVIDA 231
P + +L + T D VT+ + E ++ + P+GD ID
Sbjct: 140 PKEVRDKLAKLKPT-DEVTVNLFEQKIYS----------PVGDFSFDIDG 178
>gi|418515869|ref|ZP_13082047.1| isopropylmalate isomerase small subunit [Xanthomonas axonopodis pv.
malvacearum str. GSPB1386]
gi|418521765|ref|ZP_13087806.1| isopropylmalate isomerase small subunit [Xanthomonas axonopodis pv.
malvacearum str. GSPB2388]
gi|410701997|gb|EKQ60509.1| isopropylmalate isomerase small subunit [Xanthomonas axonopodis pv.
malvacearum str. GSPB2388]
gi|410707472|gb|EKQ65924.1| isopropylmalate isomerase small subunit [Xanthomonas axonopodis pv.
malvacearum str. GSPB1386]
Length = 215
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/155 (36%), Positives = 81/155 (52%), Gaps = 22/155 (14%)
Query: 80 NIDTDQIIPAEYLTLV------PSNPDEYEKLGSYALIGLPA-TYTTR-----FIDENET 127
N+DTDQIIP ++L + P+ DE+ Y IG P +TR F+
Sbjct: 18 NVDTDQIIPKQFLKSIKRTGFGPNLFDEWR----YLDIGEPGRDNSTRPLNPEFVLNFPR 73
Query: 128 KTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEA 187
+++A NFGCGSSREHAP AL G V+A S+A IF+ NS G + + +EA
Sbjct: 74 YQGASVLLARENFGCGSSREHAPWALDEYGFRTVIAPSFADIFYNNSFKNGLLPIVLAEA 133
Query: 188 R---LCEECST--GDVVTIEIAESRLINHTTGKEY 217
+ L E+C T G +T+++A R + G EY
Sbjct: 134 QVDALFEQCLTTEGYQLTVDLAAQR-VRRPDGVEY 167
>gi|167765907|ref|ZP_02437960.1| hypothetical protein CLOSS21_00398 [Clostridium sp. SS2/1]
gi|317498853|ref|ZP_07957138.1| 3-isopropylmalate dehydratase [Lachnospiraceae bacterium 5_1_63FAA]
gi|429763177|ref|ZP_19295533.1| 3-isopropylmalate dehydratase, small subunit [Anaerostipes hadrus
DSM 3319]
gi|167712405|gb|EDS22984.1| 3-isopropylmalate dehydratase, small subunit [Clostridium sp.
SS2/1]
gi|291559805|emb|CBL38605.1| 3-isopropylmalate dehydratase, small subunit [butyrate-producing
bacterium SSC/2]
gi|316893849|gb|EFV16046.1| 3-isopropylmalate dehydratase [Lachnospiraceae bacterium 5_1_63FAA]
gi|429179352|gb|EKY20606.1| 3-isopropylmalate dehydratase, small subunit [Anaerostipes hadrus
DSM 3319]
Length = 163
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 64/173 (36%), Positives = 92/173 (53%), Gaps = 18/173 (10%)
Query: 69 TFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETK 128
F G +V+GD+IDTD IIP EYL L P+ E + Y L + I E +
Sbjct: 3 QFKGKVWVLGDDIDTDIIIPTEYLAL-PT----VEDMKQYGFSPLRPELAGQ-IGEGD-- 54
Query: 129 TKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEAR 188
II+AG NFGCGSSRE AP + A V+A+S+ARIFFRNS+ G + L +
Sbjct: 55 ----IIVAGSNFGCGSSREQAPEIIKALKVKCVIAKSFARIFFRNSINNGLL--LIENDK 108
Query: 189 LCEECSTGDVVTIEIAESRLINHTTGKEYKLKPIGD-LGPVIDAGGIFAYARK 240
+ + GD + + + E N G +Y++ + D L +I+AGG+ +K
Sbjct: 109 IQDAVKEGDEIEVTLGEKITYN---GTDYEIHSLPDNLMEIINAGGLVEAMKK 158
>gi|398914707|ref|ZP_10657006.1| 3-isopropylmalate dehydratase, small subunit [Pseudomonas sp. GM49]
gi|398177715|gb|EJM65384.1| 3-isopropylmalate dehydratase, small subunit [Pseudomonas sp. GM49]
Length = 214
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 66/124 (53%), Gaps = 16/124 (12%)
Query: 80 NIDTDQIIPAEYLTLV------PSNPDEYEKLGSYALIGLPATYTTR------FIDENET 127
N+DTDQIIP ++L + P+ DE+ Y +G P +R F+ E
Sbjct: 18 NVDTDQIIPKQFLKSIKRTGFGPNLFDEWR----YLDVGQPYQDNSRRPLNKDFVLNAER 73
Query: 128 KTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEA 187
+++A NFGCGSSREHAP AL G +++A SYA IFF NS G + + S+A
Sbjct: 74 YQGASVLLARENFGCGSSREHAPWALEEYGFRSIIAPSYADIFFNNSFKNGLLPIILSDA 133
Query: 188 RLCE 191
+ E
Sbjct: 134 EVDE 137
>gi|152998939|ref|YP_001364620.1| isopropylmalate isomerase small subunit [Shewanella baltica OS185]
gi|160873525|ref|YP_001552841.1| isopropylmalate isomerase small subunit [Shewanella baltica OS195]
gi|217971620|ref|YP_002356371.1| isopropylmalate isomerase small subunit [Shewanella baltica OS223]
gi|378706766|ref|YP_005271660.1| 3-isopropylmalate dehydratase small subunit [Shewanella baltica
OS678]
gi|418025216|ref|ZP_12664196.1| 3-isopropylmalate dehydratase small subunit [Shewanella baltica
OS625]
gi|166990779|sp|A6WIB8.1|LEUD_SHEB8 RecName: Full=3-isopropylmalate dehydratase small subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|189046520|sp|A9KY16.1|LEUD_SHEB9 RecName: Full=3-isopropylmalate dehydratase small subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|254809079|sp|B8E4K7.1|LEUD_SHEB2 RecName: Full=3-isopropylmalate dehydratase small subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|151363557|gb|ABS06557.1| 3-isopropylmalate dehydratase, small subunit [Shewanella baltica
OS185]
gi|160859047|gb|ABX47581.1| 3-isopropylmalate dehydratase, small subunit [Shewanella baltica
OS195]
gi|217496755|gb|ACK44948.1| 3-isopropylmalate dehydratase, small subunit [Shewanella baltica
OS223]
gi|315265755|gb|ADT92608.1| 3-isopropylmalate dehydratase, small subunit [Shewanella baltica
OS678]
gi|353535629|gb|EHC05191.1| 3-isopropylmalate dehydratase small subunit [Shewanella baltica
OS625]
Length = 201
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 93/174 (53%), Gaps = 32/174 (18%)
Query: 65 EPTATFHGLCYVVGD-NIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFID 123
+P T GL ++ NIDTDQIIP ++L+ V + G+ + R++D
Sbjct: 2 QPFTTHTGLAVMIDSTNIDTDQIIPKQFLSKVTRDG-----------FGVHLFHDWRYLD 50
Query: 124 E---------NETKTKYK---IIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFF 171
+ + +++YK I++A NFGCGSSREHAP AL G A++A S+A IF+
Sbjct: 51 DAGDQPNPEFSLNQSRYKGASILLAQENFGCGSSREHAPWALVDFGLRAIIAPSFADIFY 110
Query: 172 RNSVATGEIYPL---DSEAR-LCEECS--TGDVVTIEIAESRLINHTTGKEYKL 219
NS+ G + P+ ++ R L +E + G +T+++ ++I+ +G E+
Sbjct: 111 GNSINNG-LLPVALTHAQVRQLMDEVAAEAGAQITVDLTSCKVIS-PSGAEFSF 162
>gi|422632029|ref|ZP_16697205.1| isopropylmalate isomerase small subunit [Pseudomonas syringae pv.
pisi str. 1704B]
gi|330941965|gb|EGH44662.1| isopropylmalate isomerase small subunit [Pseudomonas syringae pv.
pisi str. 1704B]
Length = 213
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 60/111 (54%), Gaps = 16/111 (14%)
Query: 80 NIDTDQIIPAEYLTLV------PSNPDEYEKLGSYALIGLPATYTTR------FIDENET 127
N+DTDQIIP ++L + P+ DE+ Y +G P ++ F+ +E
Sbjct: 18 NVDTDQIIPKQFLKSIKRTGFGPNLFDEWR----YLDVGQPYQDNSKRPLNHDFVLNHER 73
Query: 128 KTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG 178
+++A NFGCGSSREHAP AL G A++A SYA IFF NS G
Sbjct: 74 YQGASVLLARENFGCGSSREHAPWALEEYGFCAIIAPSYADIFFNNSFKNG 124
>gi|226736081|sp|B8CM42.1|LEUD_SHEPW RecName: Full=3-isopropylmalate dehydratase small subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|212556512|gb|ACJ28966.1| 3-isopropylmalate dehydratase small subunit [Shewanella
piezotolerans WP3]
Length = 201
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 67/127 (52%), Gaps = 24/127 (18%)
Query: 65 EPTATFHGLCYVVGD-NIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFID 123
+P GL ++ N+DTDQIIP ++L+ V + G+ + R++D
Sbjct: 2 QPFIAHTGLAVIIDSANVDTDQIIPKQFLSKVTRDG-----------FGIHLFHDWRYLD 50
Query: 124 E---------NETKTKYK---IIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFF 171
+ N K +YK I+++ NFGCGSSREHAP AL G A++A S+A IF+
Sbjct: 51 DAGDQPNPDFNLNKPRYKGASILVSQENFGCGSSREHAPWALADFGLKAIIAPSFADIFY 110
Query: 172 RNSVATG 178
NS+ G
Sbjct: 111 GNSINNG 117
>gi|448585528|ref|ZP_21647921.1| 3-isopropylmalate dehydratase small subunit [Haloferax gibbonsii
ATCC 33959]
gi|445726228|gb|ELZ77845.1| 3-isopropylmalate dehydratase small subunit [Haloferax gibbonsii
ATCC 33959]
Length = 202
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 62/113 (54%), Gaps = 22/113 (19%)
Query: 76 VVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFIDENETKTKY---- 131
+ G++IDTDQIIPA ++ +V ++ LG +A + R+ DEN+ +
Sbjct: 18 IRGNDIDTDQIIPARFMKVVT-----FDGLGEFAF------FDQRY-DENDEPKDHPMNE 65
Query: 132 ------KIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG 178
I++ NFGCGSSREHAP AL G A++ ES+A IF N +A G
Sbjct: 66 PQFQDAAIMVVNANFGCGSSREHAPQALMRWGIDAIIGESFAEIFAGNCLALG 118
>gi|21244182|ref|NP_643764.1| isopropylmalate isomerase small subunit [Xanthomonas axonopodis pv.
citri str. 306]
gi|23396642|sp|Q8PH04.1|LEUD_XANAC RecName: Full=3-isopropylmalate dehydratase small subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|21109817|gb|AAM38300.1| 3-isopropylmalate dehydratase small subunit [Xanthomonas axonopodis
pv. citri str. 306]
Length = 215
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/155 (36%), Positives = 81/155 (52%), Gaps = 22/155 (14%)
Query: 80 NIDTDQIIPAEYLTLV------PSNPDEYEKLGSYALIGLPA-TYTTR-----FIDENET 127
N+DTDQIIP ++L + P+ DE+ Y IG P +TR F+
Sbjct: 18 NVDTDQIIPKQFLKSIKRTGFGPNLFDEWR----YLDIGEPGRDNSTRPLNPEFVLNFPR 73
Query: 128 KTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEA 187
+++A NFGCGSSREHAP AL G V+A S+A IF+ NS G + + +EA
Sbjct: 74 YQGASVLLARENFGCGSSREHAPWALDEYGFRTVIAPSFADIFYNNSFKNGLLPIVLAEA 133
Query: 188 R---LCEECST--GDVVTIEIAESRLINHTTGKEY 217
+ L E+C T G +T+++A R + G EY
Sbjct: 134 QVDALFEQCLTTEGYQLTVDLAAQR-VRRPDGVEY 167
>gi|422639262|ref|ZP_16702691.1| isopropylmalate isomerase small subunit [Pseudomonas syringae Cit
7]
gi|440743994|ref|ZP_20923302.1| isopropylmalate isomerase small subunit [Pseudomonas syringae
BRIP39023]
gi|330951655|gb|EGH51915.1| isopropylmalate isomerase small subunit [Pseudomonas syringae Cit
7]
gi|440375060|gb|ELQ11775.1| isopropylmalate isomerase small subunit [Pseudomonas syringae
BRIP39023]
Length = 213
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 60/111 (54%), Gaps = 16/111 (14%)
Query: 80 NIDTDQIIPAEYLTLV------PSNPDEYEKLGSYALIGLPATYTTR------FIDENET 127
N+DTDQIIP ++L + P+ DE+ Y +G P ++ F+ +E
Sbjct: 18 NVDTDQIIPKQFLKSIKRTGFGPNLFDEWR----YMDVGQPYQDNSKRPLNPDFVLNHER 73
Query: 128 KTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATG 178
+++A NFGCGSSREHAP AL G A++A SYA IFF NS G
Sbjct: 74 YQGASVLLARENFGCGSSREHAPWALEEYGFCAIIAPSYADIFFNNSFKNG 124
>gi|302875441|ref|YP_003844074.1| aconitate hydratase domain-containing protein [Clostridium
cellulovorans 743B]
gi|307689041|ref|ZP_07631487.1| aconitate hydratase domain-containing protein [Clostridium
cellulovorans 743B]
gi|302578298|gb|ADL52310.1| aconitate hydratase domain-containing protein [Clostridium
cellulovorans 743B]
Length = 174
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 80 NIDTDQIIPAEYLTLVPSNPDEYEKLGSYAL--IGLPATYTTRFIDENETKTKYKIIIAG 137
+I+TD+IIPA+YLT + E L Y L + LP F ++ + + K +++
Sbjct: 15 DINTDEIIPAKYLTEITK-----EALKPYLLEDLSLPT-----FNNKEDIEGK-AVVVTR 63
Query: 138 GNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEI---YPLDSEARLCEECS 194
NFGCGSSREHAP AL G + V+AE++ARIF +N G P D+ L + +
Sbjct: 64 ANFGCGSSREHAPWALEVNGINVVIAENFARIFRQNMYNCGMFAIELPSDTIQYLFDNYA 123
Query: 195 TGDV-VTIEIAESRLINHTTGK--EYKLKPIGDLGPVIDAGGIFAYARKT 241
D +TI++ ++I ++ K E K G ++ GG YA K
Sbjct: 124 GKDASITIDVDNDKIIVTSSEKSDEIDFKVGGFDKTLVKEGGWVGYADKN 173
>gi|114045881|ref|YP_736431.1| isopropylmalate isomerase small subunit [Shewanella sp. MR-7]
gi|123030981|sp|Q0HZT1.1|LEUD_SHESR RecName: Full=3-isopropylmalate dehydratase small subunit; AltName:
Full=Alpha-IPM isomerase; Short=IPMI; AltName:
Full=Isopropylmalate isomerase
gi|113887323|gb|ABI41374.1| 3-isopropylmalate dehydratase, small subunit [Shewanella sp. MR-7]
Length = 201
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 91/174 (52%), Gaps = 32/174 (18%)
Query: 65 EPTATFHGLCYVVGD-NIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPATYTTRFID 123
+P + GL ++ NIDTDQIIP ++L+ V + G+ + R++D
Sbjct: 2 QPFTSHTGLAVMIDSANIDTDQIIPKQFLSKVTRDG-----------FGVHLFHDWRYLD 50
Query: 124 E---------NETKTKYK---IIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFF 171
+ K +Y+ I++A NFGCGSSREHAP AL G A++A S+A IF+
Sbjct: 51 DAGDVPNPDFTLNKPRYRGASILLAQENFGCGSSREHAPWALADFGLRAIIAPSFADIFY 110
Query: 172 RNSVATGEIYPLDSEA----RLCEECST--GDVVTIEIAESRLINHTTGKEYKL 219
NS+ G + P+ A +L +E ++ G +T+++ ++I+ +G E+
Sbjct: 111 GNSINNG-LLPVKLSANEVRQLMDEVASEEGAQITVDLTTCKVIS-PSGAEFSF 162
>gi|399005282|ref|ZP_10707872.1| 3-isopropylmalate dehydratase, small subunit [Pseudomonas sp. GM17]
gi|425898617|ref|ZP_18875208.1| 3-isopropylmalate dehydratase, small subunit [Pseudomonas
chlororaphis subsp. aureofaciens 30-84]
gi|397891578|gb|EJL08056.1| 3-isopropylmalate dehydratase, small subunit [Pseudomonas
chlororaphis subsp. aureofaciens 30-84]
gi|398126666|gb|EJM16093.1| 3-isopropylmalate dehydratase, small subunit [Pseudomonas sp. GM17]
Length = 214
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 81/158 (51%), Gaps = 22/158 (13%)
Query: 80 NIDTDQIIPAEYLTLV------PSNPDEYEKLGSYALIGLPATYTTR------FIDENET 127
N+DTDQIIP ++L + P+ DE+ Y +G P ++ F+ E
Sbjct: 18 NVDTDQIIPKQFLKSIKRTGFGPNLFDEWR----YLDVGQPYQDNSKRPLNKDFVLNAER 73
Query: 128 KTKYKIIIAGGNFGCGSSREHAPVALGAAGCSAVVAESYARIFFRNSVATGEIYPLDSEA 187
+++A NFGCGSSREHAP AL G +++A SYA IFF NS G + + S+A
Sbjct: 74 YQGASVLLARENFGCGSSREHAPWALEEYGFRSIIAPSYADIFFNNSFKNGLLPIILSDA 133
Query: 188 RLCE-----ECSTGDVVTIEIAESRLINHTTGKEYKLK 220
+ E E + G + I++ +++ + GK K +
Sbjct: 134 EVDELFQQVEANPGYQLQIDL-QAQTVTRPDGKVLKFE 170
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.316 0.133 0.385
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,901,451,748
Number of Sequences: 23463169
Number of extensions: 164630061
Number of successful extensions: 404525
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 6853
Number of HSP's successfully gapped in prelim test: 650
Number of HSP's that attempted gapping in prelim test: 391525
Number of HSP's gapped (non-prelim): 8971
length of query: 248
length of database: 8,064,228,071
effective HSP length: 139
effective length of query: 109
effective length of database: 9,097,814,876
effective search space: 991661821484
effective search space used: 991661821484
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 75 (33.5 bits)