Query 025783
Match_columns 248
No_of_seqs 136 out of 424
Neff 4.7
Searched_HMMs 29240
Date Mon Mar 25 17:30:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025783.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025783hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3tl1_A WHIE ORF VI, polyketide 99.8 8.4E-20 2.9E-24 151.9 13.3 110 120-242 4-117 (159)
2 1t17_A Conserved hypothetical 99.8 1.1E-19 3.9E-24 145.3 10.4 111 120-243 3-118 (148)
3 3tfz_A Cyclase; helix-GRIP, BE 99.8 1.1E-18 3.7E-23 144.4 15.1 114 119-245 5-122 (172)
4 3tvq_A Multifunctional cyclase 99.7 1.3E-17 4.5E-22 140.0 13.4 111 119-242 3-117 (169)
5 2d4r_A Hypothetical protein TT 99.7 1.4E-15 4.9E-20 116.3 16.7 112 120-244 3-115 (147)
6 3ggn_A Uncharacterized protein 99.6 2E-14 6.9E-19 116.6 14.7 111 118-244 3-117 (155)
7 3p9v_A Uncharacterized protein 99.5 5E-14 1.7E-18 115.6 11.7 104 120-240 8-119 (161)
8 2pcs_A Conserved protein; stru 99.3 1.2E-10 4.1E-15 93.4 14.3 109 120-241 4-117 (162)
9 2ns9_A Hypothetical protein AP 99.3 1.5E-10 5.2E-15 91.5 14.6 107 119-240 13-124 (157)
10 3f08_A Uncharacterized protein 99.2 5.7E-11 2E-15 96.6 10.9 102 120-238 3-108 (146)
11 2le1_A Uncharacterized protein 99.2 1E-10 3.6E-15 93.3 11.2 105 120-239 3-113 (151)
12 1tw0_A Pathogenesis-related cl 99.1 8.6E-09 2.9E-13 85.0 17.0 112 117-241 1-123 (157)
13 2qim_A PR10.2B; trans-zeatin, 99.1 7E-09 2.4E-13 85.5 15.8 111 118-241 3-124 (158)
14 1icx_A Protein LLR18A, LLPR10. 99.0 7.8E-09 2.7E-13 85.0 14.8 114 117-242 1-124 (155)
15 1e09_A PRU AV 1; allergen, maj 99.0 5.8E-09 2E-13 86.1 14.0 113 117-241 1-124 (159)
16 3p51_A Uncharacterized protein 99.0 2.8E-09 9.5E-14 88.5 11.8 101 120-240 3-117 (160)
17 2i9y_A Major latex protein-lik 98.9 5.7E-09 1.9E-13 87.1 10.1 109 119-239 17-136 (166)
18 3qsz_A STAR-related lipid tran 98.9 2.7E-07 9.2E-12 76.3 18.4 119 103-232 10-142 (189)
19 3ijt_A SMU.440, putative uncha 98.7 2.1E-07 7E-12 76.6 11.9 104 115-237 14-121 (155)
20 3rt2_A Abscisic acid receptor 98.7 2.9E-07 9.9E-12 78.7 12.9 109 120-241 28-145 (183)
21 2flh_A Cytokinin-specific bind 98.7 2.5E-07 8.5E-12 76.3 11.9 108 119-238 3-121 (155)
22 2vjg_A Major allergen DAU C 1; 98.7 4.1E-07 1.4E-11 75.3 13.1 109 118-239 3-122 (154)
23 3rws_A MTN13 protein; zeatin, 98.6 6.8E-07 2.3E-11 75.3 12.8 109 117-239 7-127 (168)
24 4a8u_A Major pollen allergen B 98.6 1.1E-06 3.7E-11 73.0 13.7 110 118-239 2-122 (159)
25 3oqu_A Abscisic acid receptor 98.6 8.6E-07 2.9E-11 77.4 12.9 98 118-228 49-153 (205)
26 3k3k_A Abscisic acid receptor 98.5 4.8E-07 1.6E-11 79.3 9.7 98 120-229 51-153 (211)
27 3ie5_A Phenolic oxidative coup 98.5 2.4E-06 8.4E-11 71.7 13.4 111 117-239 8-128 (165)
28 3jrs_A PYL1, putative uncharac 98.5 1.2E-06 4.2E-11 76.5 11.2 105 120-236 55-166 (208)
29 2qpv_A Uncharacterized protein 98.3 4.2E-06 1.4E-10 69.3 11.2 103 120-243 28-130 (156)
30 1z94_A Conserved hypothetical 98.3 9.3E-06 3.2E-10 62.9 12.2 106 120-238 4-117 (147)
31 2leq_A Uncharacterized protein 98.3 1.4E-05 4.7E-10 61.5 13.0 106 118-238 4-116 (146)
32 2lcg_A Uncharacterized protein 98.3 1.7E-05 5.7E-10 62.4 13.0 101 120-237 2-107 (142)
33 3kl1_A PYL2, putative uncharac 98.3 1.4E-05 4.9E-10 68.5 13.3 106 123-240 39-154 (190)
34 2lgh_A Uncharacterized protein 98.2 2.8E-05 9.7E-10 61.7 13.8 102 120-237 2-108 (144)
35 1xuv_A Hypothetical protein MM 98.2 4.9E-05 1.7E-09 62.3 15.5 109 115-236 18-135 (178)
36 2l8o_A Uncharacterized protein 98.2 2E-05 6.9E-10 62.6 12.1 103 119-237 2-109 (144)
37 2il5_A Hypothetical protein; s 98.2 4.4E-05 1.5E-09 61.5 14.2 110 117-239 12-128 (171)
38 3pu2_A Uncharacterized protein 98.2 5.2E-05 1.8E-09 61.7 14.3 109 115-236 9-124 (164)
39 2vq5_A S-norcoclaurine synthas 98.1 1.7E-05 5.7E-10 68.8 11.2 107 119-238 29-147 (201)
40 1xfs_A NC_840354, conserved hy 98.1 5.3E-05 1.8E-09 61.8 13.4 108 116-236 7-134 (178)
41 2lf2_A Uncharacterized protein 98.1 0.00011 3.7E-09 60.1 15.3 115 108-236 6-132 (175)
42 2ldk_A Uncharacterized protein 98.1 7.6E-05 2.6E-09 60.4 14.2 107 117-236 10-128 (172)
43 3qrz_A Abscisic acid receptor 98.1 2.1E-07 7.1E-12 82.2 -1.4 110 120-241 79-194 (223)
44 3q6a_A Uncharacterized protein 98.1 9.1E-06 3.1E-10 63.4 8.2 96 120-238 2-97 (135)
45 2nn5_A Hypothetical protein EF 98.1 2.9E-05 1E-09 65.1 11.6 98 111-234 29-127 (184)
46 3oji_A Abscisic acid receptor 98.1 2.2E-05 7.5E-10 67.8 10.8 92 123-226 34-134 (189)
47 3rd6_A MLL3558 protein; struct 98.1 5.6E-05 1.9E-09 61.1 12.4 107 119-238 8-123 (161)
48 3q64_A MLL3774 protein; struct 98.1 5.5E-05 1.9E-09 61.2 12.0 108 118-238 8-124 (162)
49 3put_A Hypothetical conserved 98.0 9.4E-05 3.2E-09 60.4 13.2 108 118-238 8-124 (166)
50 1xn6_A Hypothetical protein BC 98.0 5E-06 1.7E-10 65.3 5.3 98 118-239 7-105 (143)
51 3q63_A MLL2253 protein; struct 98.0 5.4E-05 1.9E-09 60.7 11.5 103 117-239 7-114 (151)
52 1xn5_A BH1534 unknown conserve 98.0 2.7E-05 9.1E-10 61.8 9.3 96 119-238 5-100 (146)
53 2lak_A AHSA1-like protein RHE_ 98.0 1.2E-05 4.3E-10 64.4 7.4 103 117-238 7-114 (160)
54 2l9p_A Uncharacterized protein 98.0 6.6E-05 2.3E-09 60.6 11.0 105 118-236 7-123 (164)
55 2wql_A Major allergen DAU C 1; 97.9 0.00013 4.3E-09 60.5 12.0 109 118-238 3-121 (154)
56 1vjh_A BET V I allergen family 97.9 9.4E-05 3.2E-09 58.6 10.3 80 119-239 5-91 (122)
57 3eli_A AHSA1, AHA1 domain prot 97.9 8.6E-05 2.9E-09 59.1 9.6 106 120-238 3-119 (152)
58 2k5g_A Uncharacterized protein 97.8 0.00012 4E-09 61.4 10.5 106 119-238 19-136 (191)
59 3uid_A Putative uncharacterize 97.8 0.00079 2.7E-08 55.1 15.3 112 110-235 5-128 (168)
60 2kew_A Uncharacterized protein 97.8 1.6E-05 5.5E-10 63.6 4.1 98 117-238 8-105 (152)
61 1ln1_A PC-TP, phosphatidylchol 97.7 0.0045 1.5E-07 51.5 18.0 59 103-161 35-95 (214)
62 4fpw_A CALU16; structural geno 97.7 0.00018 6.3E-09 60.5 8.9 99 116-238 18-116 (181)
63 2luz_A CALU16; structural geno 97.6 0.0004 1.4E-08 59.2 10.1 96 117-236 30-125 (192)
64 3oh8_A Nucleoside-diphosphate 97.5 0.00024 8.1E-09 67.4 8.0 108 121-242 3-116 (516)
65 3fo5_A Thioesterase, adipose a 97.2 0.0089 3E-07 53.2 14.8 123 104-232 74-208 (258)
66 3ni8_A PFC0360W protein; heat 97.2 0.0022 7.5E-08 52.3 9.4 103 115-238 15-121 (158)
67 1x53_A Activator of 90 kDa hea 97.1 0.00088 3E-08 52.7 6.6 97 118-236 10-109 (145)
68 3p0l_A Steroidogenic acute reg 96.9 0.0064 2.2E-07 51.4 10.2 65 102-166 38-103 (221)
69 1zxf_A CALC; SELF-sacrificing 96.2 0.022 7.5E-07 45.6 8.6 101 119-238 4-118 (155)
70 2e3n_A Lipid-transfer protein 95.9 0.033 1.1E-06 48.0 8.7 66 103-168 54-124 (255)
71 2pso_A STAR-related lipid tran 95.7 0.44 1.5E-05 41.0 15.3 57 102-161 56-115 (237)
72 1jss_A Stard4, cholesterol-reg 95.5 0.042 1.4E-06 46.6 7.8 67 103-169 50-118 (224)
73 1em2_A MLN64 protein; beta bar 95.4 0.055 1.9E-06 45.7 8.3 66 105-170 52-119 (229)
74 2r55_A STAR-related lipid tran 94.9 0.13 4.5E-06 43.3 9.2 64 103-166 50-116 (231)
75 2lio_A Uncharacterized protein 91.5 2.2 7.4E-05 34.3 10.7 94 119-234 4-100 (136)
76 2ffs_A Hypothetical protein PA 89.4 6.5 0.00022 32.7 12.1 42 129-170 20-63 (157)
77 1nz9_A Transcription antitermi 25.7 97 0.0033 20.5 4.3 26 205-230 10-35 (58)
No 1
>3tl1_A WHIE ORF VI, polyketide cyclase; helix-GRIP fold, polyketide C9-C14 aromatase/cyclase, linear beta-ketone intermediate; HET: JRO; 1.80A {Streptomyces coelicolor} PDB: 3tvr_A 2kf2_A
Probab=99.82 E-value=8.4e-20 Score=151.85 Aligned_cols=110 Identities=19% Similarity=0.330 Sum_probs=93.6
Q ss_pred EEEEEEEEcCCHHHHHHHHhChhhhccccCCcceeEEEEecCCEEEEE-E--EeecceeeceEEEEeEEEEeeccccccC
Q 025783 120 RIRSKIEIDASLDTVWHILTDYEKLADFVPNLAVSQVVEKNDNFVRLY-Q--IGQQNLAFGIKFNAKGVLDCYEKDLEIF 196 (248)
Q Consensus 120 ~V~asi~V~ap~e~Vw~vLTDYEryPeFIP~~~~SrVLer~g~~vrv~-Q--VG~~~i~fg~~FtarvvLdvtE~d~e~~ 196 (248)
+++.++.|+||+++||++|+|+++||+|+|+|.+++|++++++..++. . ++..++ ...|+++++++
T Consensus 4 ~v~~si~I~a~~~~V~~lV~Dve~yP~~~p~~~~~~vl~~~~~~~~~rl~~~~~~~G~--~~~~ts~~~~d--------- 72 (159)
T 3tl1_A 4 HTDNEITIAAPMELVWNMTNDIEKWPGLFSEYASVEVLGRDDDKVTFRLTMHPDADGK--VWSWVSERVAD--------- 72 (159)
T ss_dssp EEEEEEEESSCHHHHHHHHTCGGGHHHHCSSEEEEEEEEECSSEEEEEEEECCCTTSC--CCEEEEEEEEE---------
T ss_pred eeEEEEEecCCHHHHHHHHHhHHHhhhhhhCceEEEEEecCCCEEEEEEEEEeccCce--EEEEEEEEEEc---------
Confidence 688999999999999999999999999999999999999988766552 3 566665 46787777663
Q ss_pred CCCCceEEEEEee-cCCCCceeeeEEEEEcCCCeeEEEeccceeccc
Q 025783 197 PSGKKRDIEFKMI-EGDFQLFEGKWSIEQVTYSCLQIIQNNIFVKLC 242 (248)
Q Consensus 197 P~g~~rrI~f~lV-eGDFK~feG~W~fep~~~Gt~~vl~~~~~~~~~ 242 (248)
++ .++|.|+++ +|||+.+.|.|+|+|.++||.+.+.-++.+...
T Consensus 73 ~~--~~~I~~~~~~~gPf~~l~g~W~f~p~~~gt~V~~~~df~~~~~ 117 (159)
T 3tl1_A 73 PV--TRTVRAQRVETGPFQYMNIVWEYAETAEGTVMRWTQDFAMKPD 117 (159)
T ss_dssp TT--TTEEEEEESSCTTEEEEEEEEEEEEETTEEEEEEEEEEEECTT
T ss_pred CC--CCEEEEEEccCCChhhccCEEEEEECCCCEEEEEEEEEEecCC
Confidence 21 368999988 899999999999999999999999988877643
No 2
>1t17_A Conserved hypothetical protein; beta-alpha-beta-BETA-beta-BETA-beta-BETA-helix, structural G protein structure initiative, PSI, NESG; NMR {Caulobacter crescentus} SCOP: d.129.3.6
Probab=99.81 E-value=1.1e-19 Score=145.33 Aligned_cols=111 Identities=17% Similarity=0.218 Sum_probs=92.0
Q ss_pred EEEEEEEEcCCHHHHHHHHhChhhhccccCCcceeEEEEecC----CEEEE-EEEeecceeeceEEEEeEEEEeeccccc
Q 025783 120 RIRSKIEIDASLDTVWHILTDYEKLADFVPNLAVSQVVEKND----NFVRL-YQIGQQNLAFGIKFNAKGVLDCYEKDLE 194 (248)
Q Consensus 120 ~V~asi~V~ap~e~Vw~vLTDYEryPeFIP~~~~SrVLer~g----~~vrv-~QVG~~~i~fg~~FtarvvLdvtE~d~e 194 (248)
+++.++.|++|+++||++|+|+++||+|+|+|.+++++++.+ +...+ ..++..++ ...|+++++++ .
T Consensus 3 ~~~~s~~i~ap~~~v~~~v~D~~~~p~~~p~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~--~~~~~~~v~~~--~---- 74 (148)
T 1t17_A 3 RHVVTKVLPYTPDQLFELVGDVDAYPKFVPWITGMRTWNGRVDGAVSTVDAEAQVGFSFL--REKFATRVRRD--K---- 74 (148)
T ss_dssp EEEEEEEESSCTHHHHHHHTTTTCCSSCCSSCCCCCEEEEEEETTEEEEEEEEECSTTSS--CCEEEEEEEEE--T----
T ss_pred EEEEEEEecCCHHHHHHHHHHHhhHHhhCCCcCeeEEEEecCCCCCceEEEEEEEEecce--eEEEEEEEEEc--C----
Confidence 588999999999999999999999999999999999998754 44444 44565554 57888887763 1
Q ss_pred cCCCCCceEEEEEeecCCCCceeeeEEEEEcCCCeeEEEeccceecccC
Q 025783 195 IFPSGKKRDIEFKMIEGDFQLFEGKWSIEQVTYSCLQIIQNNIFVKLCI 243 (248)
Q Consensus 195 ~~P~g~~rrI~f~lVeGDFK~feG~W~fep~~~Gt~~vl~~~~~~~~~~ 243 (248)
| .++|.+++++|+|+.+.|.|+|+|.++||.+.+..++.++-++
T Consensus 75 --~---~~~i~~~~~~G~f~~~~g~w~f~~~~~gt~v~~~~~~~~~~~l 118 (148)
T 1t17_A 75 --D---ARSIDVSLLYGPFKRLNNGWRFMPEGDATRVEFVIEFAFKSAL 118 (148)
T ss_dssp --T---TCEEEEEESSTTSSCEEEEEEEEEETTEEEEEEEEEECCSCHH
T ss_pred --C---CcEEEEEECCCChhccEEEEEEEECCCCeEEEEEEEEEECcHH
Confidence 2 2489999999999999999999999999999998887766443
No 3
>3tfz_A Cyclase; helix-GRIP, BET V1-like superfamily, biosynthetic protein; HET: CXS; 2.39A {Streptomyces SP}
Probab=99.80 E-value=1.1e-18 Score=144.43 Aligned_cols=114 Identities=16% Similarity=0.333 Sum_probs=94.4
Q ss_pred EEEEEEEEEcCCHHHHHHHHhChhhhccccCCcceeEEEEecCCEEEE-EEEeecceeeceEEEEeEEEEeeccccccCC
Q 025783 119 RRIRSKIEIDASLDTVWHILTDYEKLADFVPNLAVSQVVEKNDNFVRL-YQIGQQNLAFGIKFNAKGVLDCYEKDLEIFP 197 (248)
Q Consensus 119 r~V~asi~V~ap~e~Vw~vLTDYEryPeFIP~~~~SrVLer~g~~vrv-~QVG~~~i~fg~~FtarvvLdvtE~d~e~~P 197 (248)
.+++.++.|++|+++||++|+|+++||+|+|+|.+++++++.++..++ ..++..++ .+.++++++++ |
T Consensus 5 ~~v~~si~I~ap~~~V~~~v~D~~~~p~~~P~~~~~~v~~~~~~~~~~~~~~~~~G~--~~~~~s~~~~~---------~ 73 (172)
T 3tfz_A 5 RHVEHTVTVAAPADLVWEVLADVLGYADIFPPTEKVEILEEGQGYQVVRLHVDVAGE--INTWTSRRDLD---------P 73 (172)
T ss_dssp EEEEEEEEESSCHHHHHHHHHCGGGHHHHCSSEEEEEEEEEETTEEEEEEEEEETTE--EEEEEEEEEEE---------T
T ss_pred cEEEEEEEeCCCHHHHHHHHHhHHHHHhhCcccceEEEEecCCCEEEEEEEEecCCE--EEEEEEEEEEe---------C
Confidence 479999999999999999999999999999999999999998776554 34566654 35666666553 2
Q ss_pred CCCceEEEEEee--cCCCCceeeeEEEEEcC-CCeeEEEeccceecccCcC
Q 025783 198 SGKKRDIEFKMI--EGDFQLFEGKWSIEQVT-YSCLQIIQNNIFVKLCIFP 245 (248)
Q Consensus 198 ~g~~rrI~f~lV--eGDFK~feG~W~fep~~-~Gt~~vl~~~~~~~~~~~~ 245 (248)
+ .++|.|+++ +|||+.+.|.|+|++.+ +||.+.++.++.++.+++.
T Consensus 74 ~--~~~i~~~~~~~~gpf~~~~g~w~f~~~~~~~t~V~~~~~~~~~~~~l~ 122 (172)
T 3tfz_A 74 A--RRVIAYRQLETAPIVGHMSGEWRAFTLDAERTQLVLTHDFVTRAAGDD 122 (172)
T ss_dssp T--TTEEEEEEEECCTTEEEEEEEEEEEEEETTEEEEEEEEEEEECCCCTT
T ss_pred C--CCEEEEEEeeCCCChhhcEEEEEEEECCCCcEEEEEEEEEEEcChhHH
Confidence 1 368999999 68999999999999996 7899999999988776543
No 4
>3tvq_A Multifunctional cyclase-dehydratase-3-O-methyl TR TCMN; tetracenomycin, aromatase, taxifolin, dihyroquercet helix-GRIP fold; HET: DQH; 1.67A {Streptomyces glaucescens} PDB: 2rer_A 2res_A 2rez_A
Probab=99.75 E-value=1.3e-17 Score=140.00 Aligned_cols=111 Identities=14% Similarity=0.238 Sum_probs=91.7
Q ss_pred EEEEEEEEEcCCHHHHHHHHhChhhhccccCCcceeEEEEecCCEEEEE---EEeecceeeceEEEEeEEEEeecccccc
Q 025783 119 RRIRSKIEIDASLDTVWHILTDYEKLADFVPNLAVSQVVEKNDNFVRLY---QIGQQNLAFGIKFNAKGVLDCYEKDLEI 195 (248)
Q Consensus 119 r~V~asi~V~ap~e~Vw~vLTDYEryPeFIP~~~~SrVLer~g~~vrv~---QVG~~~i~fg~~FtarvvLdvtE~d~e~ 195 (248)
.+++.++.|+||+++||++|+|+++||+|+|+|..++++++.++.+++. ++...++ ...|+++++++-.
T Consensus 3 ~~v~~si~I~a~~~~v~~lv~Dv~~~p~w~p~~~~~~~~~~~~~~~~~~l~~~~~~~G~--~~~~ts~~~~d~~------ 74 (169)
T 3tvq_A 3 ARTDNSIVVNAPFELVWDVTNDIEAWPELFSEYAEAEILRQDGDGFDFRLKTRPDANGR--VWEWVSHRVPDKG------ 74 (169)
T ss_dssp EEEEEEEEESSCHHHHHHHHTCGGGHHHHCTTEEEEEEEEEETTEEEEEEEECCCTTSC--CCEEEEEEEEEGG------
T ss_pred CeEEEEEEecCCHHHHHHHHHhhhHHHHHHhheeEEEEEecCCCEEEEEEEEEecCCCe--EEEEEEEEEEcCC------
Confidence 4789999999999999999999999999999999999999988865542 2445554 3677777766411
Q ss_pred CCCCCceEEEEEee-cCCCCceeeeEEEEEcCCCeeEEEeccceeccc
Q 025783 196 FPSGKKRDIEFKMI-EGDFQLFEGKWSIEQVTYSCLQIIQNNIFVKLC 242 (248)
Q Consensus 196 ~P~g~~rrI~f~lV-eGDFK~feG~W~fep~~~Gt~~vl~~~~~~~~~ 242 (248)
.++|.|+++ +|||+.+.|.|+|+|.++||.+.+.-++.+.+.
T Consensus 75 -----~~~I~~~~l~~gPf~~~~g~W~f~p~~~gt~V~~~~df~~~~~ 117 (169)
T 3tvq_A 75 -----SRTVRAHRVETGPFAYMNLHWTYRAVAGGTEMRWVQEFDMKPG 117 (169)
T ss_dssp -----GTEEEEEESSCTTEEEEEEEEEEEEETTEEEEEEEEEEEECTT
T ss_pred -----CcEEEEEEcCCCChhheeeEEEEEECCCCEEEEEEEEEEecCC
Confidence 368999874 799999999999999999999999888877643
No 5
>2d4r_A Hypothetical protein TTHA0849; start domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.40A {Thermus thermophilus} SCOP: d.129.3.6
Probab=99.69 E-value=1.4e-15 Score=116.30 Aligned_cols=112 Identities=18% Similarity=0.237 Sum_probs=85.4
Q ss_pred EEEEEEEEcCCHHHHHHHHhChhhhccccCCcceeEEEEecCCEEEE-EEEeecceeeceEEEEeEEEEeeccccccCCC
Q 025783 120 RIRSKIEIDASLDTVWHILTDYEKLADFVPNLAVSQVVEKNDNFVRL-YQIGQQNLAFGIKFNAKGVLDCYEKDLEIFPS 198 (248)
Q Consensus 120 ~V~asi~V~ap~e~Vw~vLTDYEryPeFIP~~~~SrVLer~g~~vrv-~QVG~~~i~fg~~FtarvvLdvtE~d~e~~P~ 198 (248)
+++.++.|+||+++||++|+|+++||+|+|+|.++++++..++.... ..++..++ ...+..++ ++ ..|
T Consensus 3 ~~~~~~~i~ap~~~V~~~l~d~~~~~~w~p~~~~~~~~~~~~~g~~~~~~~~~~g~--~~~~~~~~----~~----~~~- 71 (147)
T 2d4r_A 3 EVRAERYIPAPPERVYRLAKDLEGLKPYLKEVESLEVVAREGARTRSRWVAVAMGK--KVRWLEEE----EW----DDE- 71 (147)
T ss_dssp EEEEEEEESSCHHHHHHHHHCHHHHGGGCTTEEEEEEEEEETTEEEEEEEEEETTE--EEEEEEEE----EE----ETT-
T ss_pred eEEEEEEeCCCHHHHHHHHhChhhhhhhcccccEEEEEEeCCCccEEEEEEEeCCc--eEEEEEEE----EE----cCC-
Confidence 57889999999999999999999999999999999999876544322 23333332 23343333 22 123
Q ss_pred CCceEEEEEeecCCCCceeeeEEEEEcCCCeeEEEeccceecccCc
Q 025783 199 GKKRDIEFKMIEGDFQLFEGKWSIEQVTYSCLQIIQNNIFVKLCIF 244 (248)
Q Consensus 199 g~~rrI~f~lVeGDFK~feG~W~fep~~~Gt~~vl~~~~~~~~~~~ 244 (248)
+++|.|++++|+|+.+.|.|+|++.++||.+.++-++..+.+++
T Consensus 72 --~~~i~~~~~~g~~~~~~~~~~~~~~~~gT~v~~~~~~~~~~~~~ 115 (147)
T 2d4r_A 72 --NLRNRFFSPEGDFDRYEGTWVFLPEGEGTRVVLTLTYELTIPIF 115 (147)
T ss_dssp --TTEEEEEEEEESCSEEEEEEEEEECSSSEEEEEEEEEECCCTTT
T ss_pred --CcEEEEEeccCChhheEEEEEEEECCCCcEEEEEEEEecCCccH
Confidence 37899999999999999999999999999888887776654443
No 6
>3ggn_A Uncharacterized protein DR_A0006; structural genomics, PSI- 2, protein structure initiative, northeast structural genomics consortium; 2.00A {Deinococcus radiodurans R1} PDB: 2kcz_A
Probab=99.60 E-value=2e-14 Score=116.65 Aligned_cols=111 Identities=12% Similarity=0.132 Sum_probs=81.6
Q ss_pred cEEEEEEEEEcCCHHHHHHHHhChhhhccccCCcceeEEEEecCCEEEE-EEEeecc-eeeceEEEEeEEEEeecccccc
Q 025783 118 SRRIRSKIEIDASLDTVWHILTDYEKLADFVPNLAVSQVVEKNDNFVRL-YQIGQQN-LAFGIKFNAKGVLDCYEKDLEI 195 (248)
Q Consensus 118 ~r~V~asi~V~ap~e~Vw~vLTDYEryPeFIP~~~~SrVLer~g~~vrv-~QVG~~~-i~fg~~FtarvvLdvtE~d~e~ 195 (248)
..+|+.++.|++|+++||++++|+++||+|+|+|.+++++.. +..+. .... .+ + ...|.++++..
T Consensus 3 ~~~v~~s~~I~ap~e~V~~~~~D~e~~p~w~p~~~~v~~~~~--~~~~~~~~~~-~G~~--~~~~~~~v~e~-------- 69 (155)
T 3ggn_A 3 ETVVRDAVTIGKPAEQLYAVWRDLPGLPLLMTHLRSVEVLDD--KRSRWTVEAP-APLG--TVSWEAELTAD-------- 69 (155)
T ss_dssp -CEEEEEEEESSCHHHHHHHHHCGGGHHHHSTTCCEEEECSS--SEEEEEEECC-TTTC--EEEEEEEEEEE--------
T ss_pred ccEEEEEEEEcCCHHHHHHHHhCHHHhHHHhhhceEEEEecC--CeeEEEEEec-CCcc--eEEEEEEEEEe--------
Confidence 458999999999999999999999999999999999998754 33321 2222 12 2 34555554431
Q ss_pred CCCCCceEEEEEeecCCCCceeeeEEEEEc--CCCeeEEEeccceecccCc
Q 025783 196 FPSGKKRDIEFKMIEGDFQLFEGKWSIEQV--TYSCLQIIQNNIFVKLCIF 244 (248)
Q Consensus 196 ~P~g~~rrI~f~lVeGDFK~feG~W~fep~--~~Gt~~vl~~~~~~~~~~~ 244 (248)
.| +++|.+++++|+|..+.|.|+|++. ++||++.+..++-.|-+++
T Consensus 70 ~p---~~~i~~~~~~g~~~~~~g~~~F~~~~~~~gT~V~~~~~~~~~~~~l 117 (155)
T 3ggn_A 70 EP---GKRIAWRSLPGARIENSGEVLFRPAPGARGTEVVVRLTYRPPGGSA 117 (155)
T ss_dssp ET---TTEEEEEECTTCSSCEEEEEEEEECSSSSCEEEEEEEEEC------
T ss_pred cC---CCEEEEEECCCCCcceEEEEEEEECCCCCceEEEEEEEEECCCcHH
Confidence 23 3799999999999999999999999 3589999999888776543
No 7
>3p9v_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.78A {Marinobacter aquaeolei}
Probab=99.54 E-value=5e-14 Score=115.60 Aligned_cols=104 Identities=20% Similarity=0.303 Sum_probs=79.0
Q ss_pred EEEEEEEEcCCHHHHHHHHhChhh----hccccCCcceeEEEEecCCEEEE-E-EEeecceeeceEEEEeEEEEeecccc
Q 025783 120 RIRSKIEIDASLDTVWHILTDYEK----LADFVPNLAVSQVVEKNDNFVRL-Y-QIGQQNLAFGIKFNAKGVLDCYEKDL 193 (248)
Q Consensus 120 ~V~asi~V~ap~e~Vw~vLTDYEr----yPeFIP~~~~SrVLer~g~~vrv-~-QVG~~~i~fg~~FtarvvLdvtE~d~ 193 (248)
+++.++.|+||+++||++|+|+++ ||+|+|+ ...+++..+. . .++.+...+...|+++++++
T Consensus 8 ~v~~s~~I~ap~e~v~~lv~Dve~w~~~yp~~~p~------~~~~~~~~~~~~a~l~vg~~~~~~~~~s~~~~~------ 75 (161)
T 3p9v_A 8 ELNRDLEIPASYDEVFDLLADVPKSASHFPKVDKL------VDLGNNAYRWEMEKVGVDKHAIQSVYACTYHAD------ 75 (161)
T ss_dssp EEEEEEEESSCHHHHHHHHTCHHHHHTTSTTEEEE------EEEETTEEEEEECCBSSGGGCBCCEEEEEEEEE------
T ss_pred EEEEEEEEcCCHHHHHHHHhChhhhHhhCCCeEEE------EEcCCCceEEEEEEEeeeeEEEEEEEEEEEEEc------
Confidence 688899999999999999999999 9999998 2233443221 1 22222221134888887664
Q ss_pred ccCCCCCceEEEEEeecCCC-CceeeeEEEEEcCCC-eeEEEeccceec
Q 025783 194 EIFPSGKKRDIEFKMIEGDF-QLFEGKWSIEQVTYS-CLQIIQNNIFVK 240 (248)
Q Consensus 194 e~~P~g~~rrI~f~lVeGDF-K~feG~W~fep~~~G-t~~vl~~~~~~~ 240 (248)
|+ +++|.+++++||| +.+.|.|+|+|.++| |.+.+..++-++
T Consensus 76 ---~~--~~~I~~~~~~g~~~~~l~g~w~f~p~~~g~t~V~~~~~~e~~ 119 (161)
T 3p9v_A 76 ---KE--AGKITWSPIKGEGNGVVSGSWTLSAKGDNATAVKFQTSAELT 119 (161)
T ss_dssp ---TT--TTEEEEEECTTSTTEEEEEEEEEEESSSSCEEEEEEEEEEEE
T ss_pred ---CC--CCEEEEEEecCccceeEEEEEEEEECCCCeEEEEEEEEEEEc
Confidence 11 3689999999998 999999999999988 789999888887
No 8
>2pcs_A Conserved protein; structural genomics, unknown function, ligand binding, PSI-2 structure initiative; HET: UNL; 2.40A {Geobacillus kaustophilus} SCOP: d.129.3.10
Probab=99.26 E-value=1.2e-10 Score=93.40 Aligned_cols=109 Identities=17% Similarity=0.158 Sum_probs=76.7
Q ss_pred EEEEEEEEcCCHHHHHHHHhChhhhccccCCcceeEEEEecCCEEEE-EEEeecceeeceEEEEeEEEEeeccccccCCC
Q 025783 120 RIRSKIEIDASLDTVWHILTDYEKLADFVPNLAVSQVVEKNDNFVRL-YQIGQQNLAFGIKFNAKGVLDCYEKDLEIFPS 198 (248)
Q Consensus 120 ~V~asi~V~ap~e~Vw~vLTDYEryPeFIP~~~~SrVLer~g~~vrv-~QVG~~~i~fg~~FtarvvLdvtE~d~e~~P~ 198 (248)
+++.++.|+||+++||++|+|+++|++|+|+|.+++++. ++..++ ..++...+ +..|..++++ .+ ..|
T Consensus 4 ~i~~~~~i~ap~e~Vw~~l~D~e~~~~w~p~~~~~~~~~--~~~~~~~~~~~~g~~--~~~~~~~~~~--~~----~~~- 72 (162)
T 2pcs_A 4 NGNGSIELKGTVEEVWSKLMDPSILSKCIMGCKSLELIG--EDKYKADLQIGIAAV--KGKYDAIIEV--TD----IKP- 72 (162)
T ss_dssp EEEEEEEEESCHHHHHHHHTCHHHHHHHSTTEEEEEEEE--TTEEEEEEEECCGGG--CEEEEEEEEE--EE----EET-
T ss_pred EEeeEEEecCCHHHHHHHhcCHHHHHhhCCCceEeEEeC--CCeEEEEEEEEeeeE--EEEEEEEEEE--Ee----cCC-
Confidence 578899999999999999999999999999999888764 344332 23333332 4566655444 22 122
Q ss_pred CCceEEEEEee--c-CCCCceeeeEEEEE-cCCCeeEEEeccceecc
Q 025783 199 GKKRDIEFKMI--E-GDFQLFEGKWSIEQ-VTYSCLQIIQNNIFVKL 241 (248)
Q Consensus 199 g~~rrI~f~lV--e-GDFK~feG~W~fep-~~~Gt~~vl~~~~~~~~ 241 (248)
++++.+... . +++..+.+.|+|++ .++||++.+.-+..+.-
T Consensus 73 --~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~gT~v~~~~~~~~~g 117 (162)
T 2pcs_A 73 --PYHYKLLVNGEGGPGFVNAEGVIDLTPINDECTQLTYTYSAEVGG 117 (162)
T ss_dssp --TTEEEEEEEEEETTEEEEEEEEEEEEESSSSEEEEEEEEEEEEES
T ss_pred --CcEEEEEEEecCCCccEEEEEEEEEEecCCCcEEEEEEEEEEECC
Confidence 256666654 3 34778899999999 55679888876665543
No 9
>2ns9_A Hypothetical protein APE2225; uncharacterized conserved protein, structural genomics, PSI, structure initiative; 1.80A {Aeropyrum pernix} SCOP: d.129.3.10
Probab=99.26 E-value=1.5e-10 Score=91.46 Aligned_cols=107 Identities=14% Similarity=0.162 Sum_probs=75.7
Q ss_pred EEEEEEEEEcCCHHHHHHHHhChhhhccccCCcceeEEEEecCCEEEE-EEEeecceeeceEEEEeEEEEeeccccccCC
Q 025783 119 RRIRSKIEIDASLDTVWHILTDYEKLADFVPNLAVSQVVEKNDNFVRL-YQIGQQNLAFGIKFNAKGVLDCYEKDLEIFP 197 (248)
Q Consensus 119 r~V~asi~V~ap~e~Vw~vLTDYEryPeFIP~~~~SrVLer~g~~vrv-~QVG~~~i~fg~~FtarvvLdvtE~d~e~~P 197 (248)
.+++.++.|++|+++||++++|+++|++|+|+|.+.+ + .++..+. ..++...+ +..|..++++ .+ ..|
T Consensus 13 m~i~~~~~i~ap~e~Vw~~l~D~~~~~~w~p~~~~~~-~--~~~~~~~~~~~~~g~~--~~~~~~~~~~--~~----~~~ 81 (157)
T 2ns9_A 13 VRYEGSFEVSKTPEEVFEFLTDPKRFSRAFPGFKSVE-V--EDGSFTIELRLSLGPL--RGDARVRASF--ED----LEK 81 (157)
T ss_dssp EEEEEEEEESSCHHHHHHHHTCHHHHGGGSTTEEEEE-E--ETTEEEEEEEEESSSS--EEEEEEEEEE--EE----EET
T ss_pred EEEeeEEEEcCCHHHHHHHHcCHHHHHhhCCCceEEE-E--CCCEEEEEEEEEEcce--eEEEEEEEEE--Ee----cCC
Confidence 4799999999999999999999999999999998776 3 4555443 23332222 3455555444 23 113
Q ss_pred CCCceEEEEEe-ecC---CCCceeeeEEEEEcCCCeeEEEeccceec
Q 025783 198 SGKKRDIEFKM-IEG---DFQLFEGKWSIEQVTYSCLQIIQNNIFVK 240 (248)
Q Consensus 198 ~g~~rrI~f~l-VeG---DFK~feG~W~fep~~~Gt~~vl~~~~~~~ 240 (248)
+++|.|+. ..| +|+ +.+.|+|++.++||++.+.-++.+.
T Consensus 82 ---~~~i~~~~~~~~~~~~~~-~~~~~~l~~~~~gT~v~~~~~~~~~ 124 (157)
T 2ns9_A 82 ---PSKATVKGSGRGAGSTLD-FTLRFAVEPSGGGSRVSWVFEGNVG 124 (157)
T ss_dssp ---TTEEEEEEEEECSSEEEE-EEEEEEEEEETTEEEEEEEEEEEEE
T ss_pred ---CcEEEEEEEecCCCccEE-EEEEEEEEeCCCcEEEEEEEEEEEC
Confidence 36777753 334 466 7899999999999999888765544
No 10
>3f08_A Uncharacterized protein Q6HG14; NESG Q6HG14_bachk Q6HG14 BUR153, structural genomics, PSI-2; 2.20A {Bacillus thuringiensis serovar konkukiorganism_taxid} SCOP: d.129.3.8 PDB: 3cnw_A
Probab=99.23 E-value=5.7e-11 Score=96.63 Aligned_cols=102 Identities=16% Similarity=0.268 Sum_probs=75.1
Q ss_pred EEEEEEEEcCCHHHHHHHHhChhhhccccCCcceeEEEEecCCEEEEEEEeecceeeceEEEEeEEEEeeccccccCCCC
Q 025783 120 RIRSKIEIDASLDTVWHILTDYEKLADFVPNLAVSQVVEKNDNFVRLYQIGQQNLAFGIKFNAKGVLDCYEKDLEIFPSG 199 (248)
Q Consensus 120 ~V~asi~V~ap~e~Vw~vLTDYEryPeFIP~~~~SrVLer~g~~vrv~QVG~~~i~fg~~FtarvvLdvtE~d~e~~P~g 199 (248)
+|+.++.|+||+++||++|+|+++||+|.|.+.++++++ |+.+|....+. |..+ + -++.+ ..+
T Consensus 3 ~v~~si~I~Ap~~~VW~~l~d~~~~~~w~p~v~~~~~~~--GG~vR~~~~~~-----G~~~--~--Erl~~----~D~-- 65 (146)
T 3f08_A 3 HTTTSMEIFGSTEQVWQLIGGFNSLPDWLPYIPSSKLTE--GGRVRHLANPD-----GETI--I--ERLEV----FND-- 65 (146)
T ss_dssp EEEEEEEESSCHHHHHHHHCSTTCHHHHCTTCCEEEEEG--GGTEEEEECTT-----SCEE--E--EEEEE----EET--
T ss_pred EEEEEEEEeCCHHHHHHHHhccccHHHhCCCeEEEEEeC--CCeEEEEEeCC-----CCEE--E--EEEEE----EeC--
Confidence 588999999999999999999999999999999999884 45565433221 1111 1 11122 112
Q ss_pred CceEEEEEeecCC--CCceeeeEEEEE--cCCCeeEEEeccce
Q 025783 200 KKRDIEFKMIEGD--FQLFEGKWSIEQ--VTYSCLQIIQNNIF 238 (248)
Q Consensus 200 ~~rrI~f~lVeGD--FK~feG~W~fep--~~~Gt~~vl~~~~~ 238 (248)
.++++.|++++|+ ++.|.+.|+|.| .++||.+.-+-++.
T Consensus 66 ~~~~~~y~iv~g~~~~~~~~~~~~v~p~~~~~gt~v~w~~~~~ 108 (146)
T 3f08_A 66 KERYYTYSIMNAPFPVTNYLSTIQVKEGTESNTSLVEWSGTFT 108 (146)
T ss_dssp TTTEEEEEEEECSSSEEEEEEEEEEEECSSTTCEEEEEEEEEE
T ss_pred CCCEEEEEEecCCCceeEEEEEEEEEEecCCCcEEEEEEEEEE
Confidence 2489999999996 699999999999 45678776666554
No 11
>2le1_A Uncharacterized protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative, unknown function; NMR {Thermobifida fusca}
Probab=99.21 E-value=1e-10 Score=93.34 Aligned_cols=105 Identities=12% Similarity=0.230 Sum_probs=75.3
Q ss_pred EEEEEEEEcCCHHHHHHHHhChhhhccccCCcceeEEEEecCC---EEEEEEEeecceeeceEEEEeEEEEeeccccccC
Q 025783 120 RIRSKIEIDASLDTVWHILTDYEKLADFVPNLAVSQVVEKNDN---FVRLYQIGQQNLAFGIKFNAKGVLDCYEKDLEIF 196 (248)
Q Consensus 120 ~V~asi~V~ap~e~Vw~vLTDYEryPeFIP~~~~SrVLer~g~---~vrv~QVG~~~i~fg~~FtarvvLdvtE~d~e~~ 196 (248)
+|+.++.|+||+++||++|+|+++||+|+|++.++++++..++ .++.... .. |..+ ..++.+ ..
T Consensus 3 ~v~~si~I~ap~e~Vw~~l~d~~~~~~w~p~v~~~~~~~g~~~~~G~~r~~~~--~~---G~~~----~e~i~~----~d 69 (151)
T 2le1_A 3 TLRRSVEVAAPAADVWTLVGDFSAIHRWHPQVSAPTLRGASPHTPGAERVFGA--GT---EEEL----VERLVE----RD 69 (151)
T ss_dssp EEEEEEEESSCHHHHHHHHTTSGGGGGTCTTCCCEEEESSCTTSTTCEEEESS--SS---SSCE----EEEEEE----EE
T ss_pred eEEEEEEecCCHHHHHHHHhCcCcHHHhcCCceEEEEECCCCCCCCeEEEEEe--CC---CCEE----EEEEEE----Ee
Confidence 6889999999999999999999999999999999998876422 2332211 11 1111 112222 11
Q ss_pred CCCCceEEEEEeecCC--CCceeeeEEEEEc-CCCeeEEEecccee
Q 025783 197 PSGKKRDIEFKMIEGD--FQLFEGKWSIEQV-TYSCLQIIQNNIFV 239 (248)
Q Consensus 197 P~g~~rrI~f~lVeGD--FK~feG~W~fep~-~~Gt~~vl~~~~~~ 239 (248)
+ .+++|.|++++|+ |+.+.+.|+|+|. ++||.+...-++..
T Consensus 70 ~--~~~~~~~~~~~g~~~~~~~~~~~~l~~~~~~gt~v~w~~~f~~ 113 (151)
T 2le1_A 70 E--SARRLVYTMPDPPFPITNHRAVLEVVPRDDRHCTVVWTAMFDC 113 (151)
T ss_dssp T--TTTEEEEEEEECSSSEEEEEEEEEEEESSSSCEEEEEEEEEEE
T ss_pred C--CCCEEEEEEecCCCCceeEEEEEEEEECCCCcEEEEEEEEEEe
Confidence 2 1478999999985 7899999999995 56888887755543
No 12
>1tw0_A Pathogenesis-related class 10 protein SPE-16; seven antiparallel beta-sheet, plant protein; 2.20A {Pachyrhizus erosus} SCOP: d.129.3.1 PDB: 1txc_A*
Probab=99.07 E-value=8.6e-09 Score=85.03 Aligned_cols=112 Identities=10% Similarity=0.089 Sum_probs=81.2
Q ss_pred CcEEEEEEEEEcCCHHHHHHHHh-Chhh-hccccCCcceeEEEEecC--CEEEEEEEeecceeeceEEE-EeEEEEeecc
Q 025783 117 NSRRIRSKIEIDASLDTVWHILT-DYEK-LADFVPNLAVSQVVEKND--NFVRLYQIGQQNLAFGIKFN-AKGVLDCYEK 191 (248)
Q Consensus 117 ~~r~V~asi~V~ap~e~Vw~vLT-DYEr-yPeFIP~~~~SrVLer~g--~~vrv~QVG~~~i~fg~~Ft-arvvLdvtE~ 191 (248)
|...+..++.|++|+++||+++. |+++ +|+++|.++++++++.++ +.++...... + ..+. .+-++ ..
T Consensus 1 ~~~~~~~e~~i~a~a~kvw~~~~~d~~~~~pk~~~~i~s~~i~eG~g~~Gsir~~~~~~-G----~~~~~~kErl--~~- 72 (157)
T 1tw0_A 1 GVFVFRDETSSSVAPAKLYKALTKDSDTIAQKIDGPIQSIELVEGNGGVGTIKKITANE-G----DKTSFVLQKV--DA- 72 (157)
T ss_dssp CEEEEEEEEEESSCHHHHHHHHHHTGGGGGGGSCSSEEEEEEEESSSSTTCEEEEEEEE-T----TEEEEEEEEE--EE-
T ss_pred CcEEEEEEEEecCCHHHHHHHHhcCcchhhhhHHhhccEEEEEeCCCCCCeEEEEEeeC-C----CccceEEEEE--EE-
Confidence 34578899999999999999998 9985 699999999999999875 3455433332 1 1111 11122 21
Q ss_pred ccccCCCCCceEEEEEeecCC-----CCceeeeEEEEEcCC-CeeEEEeccceecc
Q 025783 192 DLEIFPSGKKRDIEFKMIEGD-----FQLFEGKWSIEQVTY-SCLQIIQNNIFVKL 241 (248)
Q Consensus 192 d~e~~P~g~~rrI~f~lVeGD-----FK~feG~W~fep~~~-Gt~~vl~~~~~~~~ 241 (248)
... +++.+.|++++|| ++.|.+.|+|.|.++ ||.+..+-.+....
T Consensus 73 ---~D~--~~~~~~y~iieGd~~~~~~~~~~~~~~v~~~~~~gs~v~w~~~y~~~~ 123 (157)
T 1tw0_A 73 ---IDE--ANLGYDYSIVGGTGLPESLEKLSFETKVVAGSGGGSISKVTLKFHTKG 123 (157)
T ss_dssp ---EET--TTTEEEEEEEECTTSCTTEEEEEEEEEEEECSSSSEEEEEEEEEEEST
T ss_pred ---Eec--cCCEEEEEEEecCCCccceEEEEEEEEEEecCCCCEEEEEEEEEEECC
Confidence 111 3589999999998 679999999999864 78888877766543
No 13
>2qim_A PR10.2B; trans-zeatin, cytokinin, plant hormones, plant protein, PR-1 protein, pathogenesis-related protein, allergen; HET: ZEA; 1.35A {Lupinus luteus} PDB: 3e85_A* 1xdf_A* 2k7h_A
Probab=99.05 E-value=7e-09 Score=85.52 Aligned_cols=111 Identities=8% Similarity=0.051 Sum_probs=80.5
Q ss_pred cEEEEEEEEEcCCHHHHHHHHh-Chhh-hccccCCcceeEEEEecC--CEEEEEEEeecceeeceEEE-EeEEEEeeccc
Q 025783 118 SRRIRSKIEIDASLDTVWHILT-DYEK-LADFVPNLAVSQVVEKND--NFVRLYQIGQQNLAFGIKFN-AKGVLDCYEKD 192 (248)
Q Consensus 118 ~r~V~asi~V~ap~e~Vw~vLT-DYEr-yPeFIP~~~~SrVLer~g--~~vrv~QVG~~~i~fg~~Ft-arvvLdvtE~d 192 (248)
...+..++.|++|+++||+++. |+++ +|+++|.++++++++.++ +.+|....+. + ..+. .+-++ ..-
T Consensus 3 ~~~~~~e~~i~a~a~kvw~~~~~d~~~~~pk~~~~i~s~~i~eGdgg~Gsir~~~~~~-g----~~~~~~kErl--~~~- 74 (158)
T 2qim_A 3 VFTFQDEYTSTIAPAKLYKALVTDADIIIPKAVETIQSVEIVEGNGGPGTIKKLTFIE-G----GESKYVLHKI--EAI- 74 (158)
T ss_dssp EEEEEEEEEESSCHHHHHHHHTTTHHHHHHHHCTTEEEEEEEESSSSTTCEEEEEEEE-T----TEEEEEEEEE--EEE-
T ss_pred CEEEEEEEEecCCHHHHHHHHhcCccchhhhHHhhCcEEEEEecCCCCCeEEEEEEcC-C----CcceeEEEEE--EEE-
Confidence 3578899999999999999999 9996 599999999999999865 3455433332 1 1111 11112 111
Q ss_pred cccCCCCCceEEEEEeecCC-----CCceeeeEEEEEcCC-CeeEEEeccceecc
Q 025783 193 LEIFPSGKKRDIEFKMIEGD-----FQLFEGKWSIEQVTY-SCLQIIQNNIFVKL 241 (248)
Q Consensus 193 ~e~~P~g~~rrI~f~lVeGD-----FK~feG~W~fep~~~-Gt~~vl~~~~~~~~ 241 (248)
.. +++.+.|++++|| ++.|.+.|+|.|.++ ||.+..+-.+....
T Consensus 75 ---D~--~~~~~~y~iieG~~~~~~~~~~~~~~~v~~~~~~gs~v~wt~~y~~~~ 124 (158)
T 2qim_A 75 ---DE--ANLGYNYSIVGGVGLPDTIEKISFETKLVEGANGGSIGKVTIKIETKG 124 (158)
T ss_dssp ---EG--GGTEEEEEEEEESSCCCSEEEEEEEEEEEECSTTCEEEEEEEEEEEST
T ss_pred ---ec--CCCEEEEEEEeccCCccceEEEEEEEEEEecCCCCEEEEEEEEEEECC
Confidence 11 3589999999998 669999999999864 78888777766543
No 14
>1icx_A Protein LLR18A, LLPR10.1A; 7-stranded beta sheet, C-terminal helix, allergen; 1.95A {Lupinus luteus} SCOP: d.129.3.1 PDB: 1ifv_A
Probab=99.02 E-value=7.8e-09 Score=85.01 Aligned_cols=114 Identities=11% Similarity=0.085 Sum_probs=81.6
Q ss_pred CcEEEEEEEEEcCCHHHHHHHHh-Chhh-hccccCCcceeEEEEecC--CEEEEEEEeecceeeceEEEEeEEEEeeccc
Q 025783 117 NSRRIRSKIEIDASLDTVWHILT-DYEK-LADFVPNLAVSQVVEKND--NFVRLYQIGQQNLAFGIKFNAKGVLDCYEKD 192 (248)
Q Consensus 117 ~~r~V~asi~V~ap~e~Vw~vLT-DYEr-yPeFIP~~~~SrVLer~g--~~vrv~QVG~~~i~fg~~FtarvvLdvtE~d 192 (248)
|...+..++.|++|+++||+++. |+++ +|+++|.++++++++.++ +.++...... +. ..+. .+-++ ..-
T Consensus 1 ~~~~~~~e~~i~a~a~kvw~~~~~d~~~~~pk~~~~i~s~~i~eG~g~~Gsir~~~~~~-G~--~~~~-~kErl--~~~- 73 (155)
T 1icx_A 1 GIFAFENEQSSTVAPAKLYKALTKDSDEIVPKVIEPIQSVEIVEGNGGPGTIKKIIAIH-DG--HTSF-VLHKL--DAI- 73 (155)
T ss_dssp CEEEEEEEEEESSCHHHHHHHHTTTHHHHHHHHSTTEEEEEEEESSSSTTCEEEEEEES-SS--SEEE-EEEEE--EEE-
T ss_pred CcEEEEEEEEecCCHHHHHHHHhcCcchhcchhhhhccEEEEEecCCCCCeEEEEEEec-CC--ccee-EEEEE--EEE-
Confidence 34578899999999999999999 9985 699999999999999875 3455433332 21 0111 11122 111
Q ss_pred cccCCCCCceEEEEEeecCC-----CCceeeeEEEEEcC-CCeeEEEeccceeccc
Q 025783 193 LEIFPSGKKRDIEFKMIEGD-----FQLFEGKWSIEQVT-YSCLQIIQNNIFVKLC 242 (248)
Q Consensus 193 ~e~~P~g~~rrI~f~lVeGD-----FK~feG~W~fep~~-~Gt~~vl~~~~~~~~~ 242 (248)
.. +++.+.|++++|| ++.|.+.|+|.|.+ +||.+..+-.+.....
T Consensus 74 ---D~--~~~~~~y~iieGd~~~~~~~~~~~~~~v~~~~~~gs~v~w~~~y~~~~~ 124 (155)
T 1icx_A 74 ---DE--ANLTYNYSIIGGEGLDESLEKISYESKILPGPDGGSIGKINVKFHTKGD 124 (155)
T ss_dssp ---EG--GGTEEEEEEEEETTSCTTEEEEEEEEEEEECGGGCEEEEEEEEEEESSS
T ss_pred ---ec--cCCEEEEEEEecCCCccceEEEEEEEEEEecCCCCEEEEEEEEEEECCC
Confidence 11 3589999999998 67999999999986 4788888777765433
No 15
>1e09_A PRU AV 1; allergen, major cherry allergen, pathogenesis-related protein, heteronuclear structure; NMR {Prunus avium} SCOP: d.129.3.1 PDB: 1h2o_A 2lpx_A
Probab=99.02 E-value=5.8e-09 Score=86.12 Aligned_cols=113 Identities=12% Similarity=0.194 Sum_probs=81.0
Q ss_pred CcEEEEEEEEEcCCHHHHHHHHh-Chhh-hccccC-CcceeEEEEecC--CEEEEEEEeecceeeceEEEEeEEEEeecc
Q 025783 117 NSRRIRSKIEIDASLDTVWHILT-DYEK-LADFVP-NLAVSQVVEKND--NFVRLYQIGQQNLAFGIKFNAKGVLDCYEK 191 (248)
Q Consensus 117 ~~r~V~asi~V~ap~e~Vw~vLT-DYEr-yPeFIP-~~~~SrVLer~g--~~vrv~QVG~~~i~fg~~FtarvvLdvtE~ 191 (248)
|...+..++.|++|+++||+++. |+++ +|+++| .++++++++.++ +.++....+. +. .+.. .+-++ ..
T Consensus 1 ~~~~~~~e~~i~ap~~~vw~~~~~d~~~~~pk~~P~~i~s~~~~eGdgg~Gsvr~~~~~~-G~--~~~~-~kErl--~~- 73 (159)
T 1e09_A 1 GVFTYESEFTSEIPPPRLFKAFVLDADNLVPKIAPQAIKHSEILEGDGGPGTIKKITFGE-GS--QYGY-VKHKI--DS- 73 (159)
T ss_dssp CEEEEEEEEEESSCHHHHHHHHTTTHHHHHHHHCTTTEEEEEEEESSSSTTCEEEEEECC-SS--SCEE-EEEEE--EE-
T ss_pred CcEEEEEEEEecCCHHHHHHHHhcCccccchhhChhhccEEEEEeCCCCCceEEEEEecC-CC--CceE-EEEEE--EE-
Confidence 34578899999999999999998 9985 699999 789999998865 3355443332 21 1111 11112 11
Q ss_pred ccccCCCCCceEEEEEeecCC-----CCceeeeEEEEEcCC-CeeEEEeccceecc
Q 025783 192 DLEIFPSGKKRDIEFKMIEGD-----FQLFEGKWSIEQVTY-SCLQIIQNNIFVKL 241 (248)
Q Consensus 192 d~e~~P~g~~rrI~f~lVeGD-----FK~feG~W~fep~~~-Gt~~vl~~~~~~~~ 241 (248)
... +++.|.|++++|| ++.|.+.|+|.|.++ ||.+..+-.+....
T Consensus 74 ---~D~--~~~~~~y~iieG~~~~~~~~~~~~~~~v~~~~~~gs~v~wt~~y~~~~ 124 (159)
T 1e09_A 74 ---IDK--ENYSYSYTLIEGDALGDTLEKISYETKLVASPSGGSIIKSTSHYHTKG 124 (159)
T ss_dssp ---EET--TTTEEEEEECCCTTTGGGEEEEEEEEEECCCTTSSEEEEEEEEEEECS
T ss_pred ---EcC--CCCEEEEEEEecccCcccceEEEEEEEEEecCCCCEEEEEEEEEEECC
Confidence 111 3589999999997 579999999999864 78888887776543
No 16
>3p51_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 2.06A {Nitrosospira multiformis}
Probab=99.01 E-value=2.8e-09 Score=88.49 Aligned_cols=101 Identities=19% Similarity=0.263 Sum_probs=75.0
Q ss_pred EEEEEEEEcCCHHHHHHHHhChhhhccccCCccee-EEEEecC----CEEEEEEEeecceeeceEEEEeEEEEeeccccc
Q 025783 120 RIRSKIEIDASLDTVWHILTDYEKLADFVPNLAVS-QVVEKND----NFVRLYQIGQQNLAFGIKFNAKGVLDCYEKDLE 194 (248)
Q Consensus 120 ~V~asi~V~ap~e~Vw~vLTDYEryPeFIP~~~~S-rVLer~g----~~vrv~QVG~~~i~fg~~FtarvvLdvtE~d~e 194 (248)
+|..++.|+||+++||++|+|+++| +|.|.+..| ++++.++ +.+|.. | +. . .-++.+.
T Consensus 3 ~v~~si~I~Ap~~~VW~~v~Df~~~-~w~P~v~~s~e~~eg~~~~~vGsvR~~--g--g~---v------~Erl~~~--- 65 (160)
T 3p51_A 3 KVYNSIVVDAPVERVWSRIRNFHDF-SWAPSLIKSCKKVGGGGGYSVGARRLL--N--GE---F------LDTLIAY--- 65 (160)
T ss_dssp EEEEEEEESSCHHHHHHHHCCTTCC-TTCTTTCCCEEEESSCCTTCTTCEEEE--T--TT---E------EEEEEEE---
T ss_pred EEEEEEEECCCHHHHHHHHhCcCCC-eEccCceEEEEEEecCCCCCCCCEEEE--C--CE---E------EEEEEEE---
Confidence 5889999999999999999999999 999999999 8886653 345543 3 21 1 1111221
Q ss_pred cCCCCCceEEEEEeecCCC-------CceeeeEEEEEcC--CCeeEEEeccceec
Q 025783 195 IFPSGKKRDIEFKMIEGDF-------QLFEGKWSIEQVT--YSCLQIIQNNIFVK 240 (248)
Q Consensus 195 ~~P~g~~rrI~f~lVeGDF-------K~feG~W~fep~~--~Gt~~vl~~~~~~~ 240 (248)
.+ .++.+.|++++|++ +.|.|.|+|.|.+ +||.+.-+-.+..+
T Consensus 66 -D~--~~~~~sY~ii~g~l~~~~~~~~~y~~~~~v~p~~~~ggt~V~w~~~~~~~ 117 (160)
T 3p51_A 66 -SE--IERRIMYSMDEGPSPVSSGEIYNYVGNLHLLPVTIDDTTFVEWSGSWESA 117 (160)
T ss_dssp -ET--TTTEEEEEEEECSTTSSTTTEEEEEEEEEEEEETTTTEEEEEEEEEEEES
T ss_pred -cC--CCcEEEEEEecCCCcccccceeEEEEEEEEEEecCCCCEEEEEEEEEEeC
Confidence 12 25899999999975 5899999999984 56777766666554
No 17
>2i9y_A Major latex protein-like protein 28 or MLP-like protein 28; AT1G70830, BET V1-like, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana}
Probab=98.91 E-value=5.7e-09 Score=87.08 Aligned_cols=109 Identities=18% Similarity=0.250 Sum_probs=78.5
Q ss_pred EEEEEEEEEcCCHHHHHHH-HhChhhhccccC-CcceeEEEEec-CC--EEEEEEEeecceeeceEEEEeEEEEeecccc
Q 025783 119 RRIRSKIEIDASLDTVWHI-LTDYEKLADFVP-NLAVSQVVEKN-DN--FVRLYQIGQQNLAFGIKFNAKGVLDCYEKDL 193 (248)
Q Consensus 119 r~V~asi~V~ap~e~Vw~v-LTDYEryPeFIP-~~~~SrVLer~-g~--~vrv~QVG~~~i~fg~~FtarvvLdvtE~d~ 193 (248)
..+..++.|++|+++||++ +.|+..+|+++| .++++++++.+ |+ .+|....+..+- . -..+-+++ .
T Consensus 17 ~k~~~ev~i~apa~kvw~~~~~d~~~lpk~~P~~i~s~~~~eGd~gg~Gsir~~~~~~gg~---~-~~~kErl~--~--- 87 (166)
T 2i9y_A 17 GKLETDVEIKASADKFHHMFAGKPHHVSKASPGNIQGCDLHEGDWGTVGSIVFWNYVHDGE---A-KVAKERIE--A--- 87 (166)
T ss_dssp EEEEEEEEESSCHHHHHGGGSSCSSCCCCSCSSCCSSCCCCSCCSCSTTCCCEEEEEETTE---E-EEEEEEEE--E---
T ss_pred cEEEEEEEecCCHHHHHHHHhcccccccccccccceEEEEEcCCCCCCCeEEEEEEecCCC---c-eEEEEEEE--E---
Confidence 4799999999999999999 569999999999 99999999876 32 344332222111 1 11122222 1
Q ss_pred ccCCCCCceEEEEEeecCC----CCceeeeEEEEEc--CCCeeEEEecccee
Q 025783 194 EIFPSGKKRDIEFKMIEGD----FQLFEGKWSIEQV--TYSCLQIIQNNIFV 239 (248)
Q Consensus 194 e~~P~g~~rrI~f~lVeGD----FK~feG~W~fep~--~~Gt~~vl~~~~~~ 239 (248)
... +++.+.|++++|| ++.|.+.|+|.|. ++||.+..+-.+..
T Consensus 88 -iD~--~~~~~~y~iieGd~~~~~~~~~~ti~v~p~~~g~gs~v~wt~~ye~ 136 (166)
T 2i9y_A 88 -VEP--DKNLITFRVIEGDLMKEYKSFLLTIQVTPKPGGPGSIVHWHLEYEK 136 (166)
T ss_dssp -EET--TTTEEEEEECCTTGGGTEEEEEEEEEEEEEEETTEEEEEEEEEEEE
T ss_pred -Eec--cCcEEEEEEEeCCCCCCeeEEEEEEEEEECCCCCCcEEEEEEEEEE
Confidence 111 3589999999999 6899999999998 55788887776654
No 18
>3qsz_A STAR-related lipid transfer protein; structural genomics, PSI-biology; 2.39A {Xanthomonas axonopodis PV}
Probab=98.86 E-value=2.7e-07 Score=76.30 Aligned_cols=119 Identities=14% Similarity=0.230 Sum_probs=79.7
Q ss_pred cCCceEEEEEEcCCCc-EEEEEEEEEcCCHHHHHHHHhChhhhccccCCcceeEEEEecCCEEEEEEEeecceee-ceEE
Q 025783 103 HGDGVCIEIKKLGRNS-RRIRSKIEIDASLDTVWHILTDYEKLADFVPNLAVSQVVEKNDNFVRLYQIGQQNLAF-GIKF 180 (248)
Q Consensus 103 ~~~~v~V~v~~l~~~~-r~V~asi~V~ap~e~Vw~vLTDYEryPeFIP~~~~SrVLer~g~~vrv~QVG~~~i~f-g~~F 180 (248)
..+++.|.-+..++.. ..+.+...|++++++||++|.|++.|++|.|+|.+++|++++++...+++.-.....+ .-.|
T Consensus 10 ~~~gv~v~~~~~~~~~~~~~k~~~~v~~s~~~v~~~l~D~~~~~~W~~~~~~~~vle~~~~~~i~y~~~~~p~p~~~RD~ 89 (189)
T 3qsz_A 10 DAEGIKVYVRNVEGSPLREFRGEVRLKAAADDVVKVLRDANAFRQWMPDVAASELLKATDTEQYHYLDNSAPWPVSNRDG 89 (189)
T ss_dssp EETTEEEEEECCTTCSSCEEEEEEEESSCHHHHHHHHHCGGGGGGTSTTEEEEEEEEECSSEEEEEEEECCSSSCCCEEE
T ss_pred cCCCEEEEEEeCCCCCeEEEEEEEEEECCHHHHHHHHHhHHHhhhHHHhcCEEEEEeecCCceEEEEEeecCCCcCCcce
Confidence 4567888888766544 6899999999999999999999999999999999999999966655554432222100 0112
Q ss_pred EEeEEEEeeccccccCCCCCceEEEEEeecCC-----------CCceeeeEEEEEcCCC-eeEE
Q 025783 181 NAKGVLDCYEKDLEIFPSGKKRDIEFKMIEGD-----------FQLFEGKWSIEQVTYS-CLQI 232 (248)
Q Consensus 181 tarvvLdvtE~d~e~~P~g~~rrI~f~lVeGD-----------FK~feG~W~fep~~~G-t~~v 232 (248)
...... . ..++ ..|.+.+...+ ++.+.|.|.|+| ++| |.+.
T Consensus 90 v~~~~~---~----~~~~---g~~~i~~~~~~~~~P~~~~~VR~~~~~~~~~i~p-~~~~t~vt 142 (189)
T 3qsz_A 90 VYHFTY---E----KAGD---GAITVRVEAVPDYLPLRKGKVRIPRAKGQWTLVP-DADGVDVT 142 (189)
T ss_dssp EEEEEE---E----ECTT---SCEEEEEEECTTSSCCCTTSEECCCEEEEEEEEE-CSSSEEEE
T ss_pred EEEEEE---E----ECCC---CeEEEEEEcCCCccCCCCCeEEeeEeeEEEEEEE-CCCeEEEE
Confidence 221111 1 1122 23444444332 688999999999 665 5443
No 19
>3ijt_A SMU.440, putative uncharacterized protein; hypothetical protein, unknown function; 2.38A {Streptococcus mutans} SCOP: d.129.3.9 PDB: 2b79_A
Probab=98.68 E-value=2.1e-07 Score=76.57 Aligned_cols=104 Identities=9% Similarity=0.048 Sum_probs=68.7
Q ss_pred CCCcEEEEEEEEEcCCHHHHHHHHhChhhhccccCCcceeEEEEe---cCCEEEEEEEeecceeeceEEEEeEEEEeecc
Q 025783 115 GRNSRRIRSKIEIDASLDTVWHILTDYEKLADFVPNLAVSQVVEK---NDNFVRLYQIGQQNLAFGIKFNAKGVLDCYEK 191 (248)
Q Consensus 115 ~~~~r~V~asi~V~ap~e~Vw~vLTDYEryPeFIP~~~~SrVLer---~g~~vrv~QVG~~~i~fg~~FtarvvLdvtE~ 191 (248)
.....+++.++.|+||+++||++|+|+++||+|-|.|..+++ +. .|.+.++...| + ... ...+++
T Consensus 14 g~~~~~i~~si~I~Appe~VW~~ltD~~~~~~W~p~v~~~~~-~G~~~~G~~~~~~~~~--~----~~~----~~~v~~- 81 (155)
T 3ijt_A 14 GRGSMKFSFELAVNTKKEDAWTYYSQVNQWFVWEGDLEQISL-EGEFTTGQKGKMKMED--M----PEL----AFTLVE- 81 (155)
T ss_dssp -CCCEEEEEEEEESSCHHHHHHHHHCGGGGGGTSTTEEEEEE-SSSSSTTCEEEEEETT--S----CCE----EEEECC-
T ss_pred CCCcEEEEEEEEEcCCHHHHHHHHhCcccccccchhhEeeec-cCCCCCCCEEEEEeCC--C----CcE----EEEEEE-
Confidence 444579999999999999999999999999999999988764 22 12223221111 1 111 122343
Q ss_pred ccccCCCCCceEEEEEeecCCCCceeeeEEEEEc-CCCeeEEEeccc
Q 025783 192 DLEIFPSGKKRDIEFKMIEGDFQLFEGKWSIEQV-TYSCLQIIQNNI 237 (248)
Q Consensus 192 d~e~~P~g~~rrI~f~lVeGDFK~feG~W~fep~-~~Gt~~vl~~~~ 237 (248)
..| ++++.++.. -++..+.+.|+|++. ++||++..+.++
T Consensus 82 ---~~p---~~~~~~~~~-~p~~~~~~~h~l~p~~~ggTrvt~~~~~ 121 (155)
T 3ijt_A 82 ---VRE---NQCFSDLTA-TPFGNVLFEHEILENPDGTISLRHSVSL 121 (155)
T ss_dssp ---CBT---TTEEEEEEE-ETTEEEEEEEEEEECTTSCEEEEEEEEE
T ss_pred ---EeC---CcEEEEEEe-cCCeEEEEEEEEEEcCCCcEEEEEEEEE
Confidence 234 367888644 346688899999997 566777665443
No 20
>3rt2_A Abscisic acid receptor PYL10; ABA-independent PP2C inhibitor, PP2CS, hydrolase inhibitor; 1.50A {Arabidopsis thaliana} PDB: 3r6p_A* 3qtj_A* 3uqh_A 3rt0_C
Probab=98.67 E-value=2.9e-07 Score=78.73 Aligned_cols=109 Identities=18% Similarity=0.214 Sum_probs=73.6
Q ss_pred EEEEEEEEcCCHHHHHHHHhChhhhccccCCcceeEEEEe-cC--CEEEEEEEeecceeeceEEEEeEEEEeeccccccC
Q 025783 120 RIRSKIEIDASLDTVWHILTDYEKLADFVPNLAVSQVVEK-ND--NFVRLYQIGQQNLAFGIKFNAKGVLDCYEKDLEIF 196 (248)
Q Consensus 120 ~V~asi~V~ap~e~Vw~vLTDYEryPeFIP~~~~SrVLer-~g--~~vrv~QVG~~~i~fg~~FtarvvLdvtE~d~e~~ 196 (248)
.......|+||+++||++|.|++++++|.|.+..+ +++. ++ +.+|....+.. .. .. .+..++.+ ..
T Consensus 28 ~~~v~~~I~Apa~~VW~~v~df~~l~~w~P~V~s~-~~eG~~ggvGsvR~lt~~~G-~p--~~---~vkErL~~----~D 96 (183)
T 3rt2_A 28 SSTLVKHIKAPLHLVWSIVRRFDEPQKYKPFISRC-VVQGKKLEVGSVREVDLKSG-LP--AT---KSTEVLEI----LD 96 (183)
T ss_dssp EEEEEEEESSCHHHHHHHHTCTTCGGGTCTTEEEE-EESSSCCCTTCEEEEEECCS-ST--TC---EEEEEEEE----EE
T ss_pred EEEEEEEEeCCHHHHHHHHhCcCchhhcCccceEE-EeeCCCCCCCcEEEEEeCCC-Cc--cc---eEEEEEEE----EE
Confidence 34455599999999999999999999999999999 5654 22 34664444322 10 00 01122222 12
Q ss_pred CCCCceEEEEEeecCC--CCceeeeEEEEEcC-C---CeeEEEeccceecc
Q 025783 197 PSGKKRDIEFKMIEGD--FQLFEGKWSIEQVT-Y---SCLQIIQNNIFVKL 241 (248)
Q Consensus 197 P~g~~rrI~f~lVeGD--FK~feG~W~fep~~-~---Gt~~vl~~~~~~~~ 241 (248)
+ +++.+.|++++|+ ++.|.+.+++.|.+ + ||.+.-.-.+-+++
T Consensus 97 ~--~~~~~sY~Iieg~lp~~~y~ati~v~p~~~dG~~gt~V~Ws~~fd~~~ 145 (183)
T 3rt2_A 97 D--NEHILGIRIVGGDHRLKNYSSTISLHSETIDGKTGTLAIESFVVDVPE 145 (183)
T ss_dssp T--TTTEEEEEEEEESCSCTTCEEEEEEEEEEETTEEEEEEEEEEEEECCT
T ss_pred C--CCCEEEEEEecCCcceeEEEEEEEEEEecCCCCCCEEEEEEEEEEcCC
Confidence 2 2578999999996 89999999999986 4 46666665554443
No 21
>2flh_A Cytokinin-specific binding protein; zeatin, pathogenesis-related proteins, multiple- ligand binding, plant protein; HET: ZEA; 1.20A {Vigna radiata} PDB: 3c0v_A*
Probab=98.66 E-value=2.5e-07 Score=76.28 Aligned_cols=108 Identities=12% Similarity=0.327 Sum_probs=75.3
Q ss_pred EEEEEEEEEcCCHHHHHHH-HhChhhh-ccccCCc-ceeEEEEecCC--EEEEEEEeecceeeceEEEEeEEEEeecccc
Q 025783 119 RRIRSKIEIDASLDTVWHI-LTDYEKL-ADFVPNL-AVSQVVEKNDN--FVRLYQIGQQNLAFGIKFNAKGVLDCYEKDL 193 (248)
Q Consensus 119 r~V~asi~V~ap~e~Vw~v-LTDYEry-PeFIP~~-~~SrVLer~g~--~vrv~QVG~~~i~fg~~FtarvvLdvtE~d~ 193 (248)
..+..++.|++|+++||++ +.|+.++ |+++|.. +++++++.+|+ .+|....+...- .. ..+=++ .+
T Consensus 3 ~~~~~e~~i~a~a~kvw~~~v~d~~~l~pk~~P~~i~s~~~~eGdgg~Gsvr~~~~~~g~~---~~-~~kErl--~~--- 73 (155)
T 2flh_A 3 KEFNTQTELSVRLEALWAVLSKDFITVVPKVLPHIVKDVQLIEGDGGVGTILIFNFLPEVS---PS-YQREEI--TE--- 73 (155)
T ss_dssp EEEEEEEEESSCHHHHHHHHHTSCTTHHHHHCTTTEEEEEEEECSSSTTCEEEEEECTTSS---SC-EEEEEE--EE---
T ss_pred cEEEEEEEecCCHHHHHHHHhcccccccchhccccceEEEEEcCCCCCCeEEEEEeeCCCC---Cc-EEEEEE--EE---
Confidence 4688999999999999999 8999999 9999966 56688887753 355433322100 01 111112 11
Q ss_pred ccCCCCCceEEEEEeecCC-----CCceeeeEEEEEcCC-CeeEEEeccce
Q 025783 194 EIFPSGKKRDIEFKMIEGD-----FQLFEGKWSIEQVTY-SCLQIIQNNIF 238 (248)
Q Consensus 194 e~~P~g~~rrI~f~lVeGD-----FK~feG~W~fep~~~-Gt~~vl~~~~~ 238 (248)
..+ +++.+.|++++|| ++.|.+.|++.|.++ ||.+..+-.+.
T Consensus 74 -iD~--~~~~~~y~iieg~~l~~~~~~~~~~i~v~p~~~ggs~v~wt~~y~ 121 (155)
T 2flh_A 74 -FDE--SSHEIGLQVIEGGYLSQGLSYYKTTFKLSEIEEDKTLVNVKISYD 121 (155)
T ss_dssp -EET--TTTEEEEEEEEEGGGGTTCSEEEEEEEEEEEETTEEEEEEEEEEE
T ss_pred -EeC--CCCEEEEEEEeccccccCceEEEEEEEEEECCCCCEEEEEEEEEE
Confidence 111 3589999999997 789999999999875 56666655544
No 22
>2vjg_A Major allergen DAU C 1; major carrot allergen, pathogenesis-related protein, plant defense; HET: P4C PG4 PGE; 2.70A {Daucus carota} PDB: 2wql_A* 2bk0_A
Probab=98.65 E-value=4.1e-07 Score=75.27 Aligned_cols=109 Identities=10% Similarity=0.131 Sum_probs=76.0
Q ss_pred cEEEEEEEEEcCCHHHHHHH-HhChhhh-ccccCC-cceeEEEEecC--CEEEEEEEeecceeeceEEEEeEEEEeeccc
Q 025783 118 SRRIRSKIEIDASLDTVWHI-LTDYEKL-ADFVPN-LAVSQVVEKND--NFVRLYQIGQQNLAFGIKFNAKGVLDCYEKD 192 (248)
Q Consensus 118 ~r~V~asi~V~ap~e~Vw~v-LTDYEry-PeFIP~-~~~SrVLer~g--~~vrv~QVG~~~i~fg~~FtarvvLdvtE~d 192 (248)
...+...+.|++||++||++ +.|+.++ |+++|. ++++++ +.+| +.+|....+..+ ..+ ..+=++ .+
T Consensus 3 ~~~~~~ei~i~a~a~kvw~~~v~d~~~l~pk~~P~~v~s~e~-eGdg~~Gsir~~~~~~g~---~~~-~~kErl--~~-- 73 (154)
T 2vjg_A 3 AQSHSLEITSSVSAEKIFSGIVLDVDTVIPKAATGAYKSVEV-KGDGGAGTVRIITLPEGS---PIT-TMTVRT--DA-- 73 (154)
T ss_dssp CCEEEEEEEESSCHHHHHHHHTTTHHHHHHHHSTTTCSEEEE-ESSSSTTCEEEEECCTTC---SCC-EEEEEE--EE--
T ss_pred ceEEEEEEEecCCHHHHHHhhhCCccccchhhccCceeEEEE-eCCCCCceEEEEEecCCC---Cce-EEEEEE--EE--
Confidence 34678899999999999999 9999999 999995 788888 7764 345543322211 011 111122 11
Q ss_pred cccCCCCCceEEEEEeecCC-----CCceeeeEEEEEcCC-CeeEEEecccee
Q 025783 193 LEIFPSGKKRDIEFKMIEGD-----FQLFEGKWSIEQVTY-SCLQIIQNNIFV 239 (248)
Q Consensus 193 ~e~~P~g~~rrI~f~lVeGD-----FK~feG~W~fep~~~-Gt~~vl~~~~~~ 239 (248)
..+ +++.+.|++++|| ++.|...|++.|.++ |+.+..+-.+.-
T Consensus 74 --iD~--~~~~~~y~iiegd~l~~~~~~~~~ti~v~p~~~ggs~v~wt~~y~~ 122 (154)
T 2vjg_A 74 --VNK--EALSYDSTVIDGDILLGFIESIETHMVVVPTADGGSITKTTAIFHT 122 (154)
T ss_dssp --EET--TTTEEEEEEEESGGGTTTEEEEEEEEEEEECTTSCEEEEEEEEEEE
T ss_pred --Eec--cCCEEEEEEEecCCCccceEEEEEEEEEEECCCCcEEEEEEEEEEE
Confidence 112 3689999999998 588999999999855 677776666553
No 23
>3rws_A MTN13 protein; zeatin, cytokinin, hormone, lucerne, nodulin, NODU plant protein; HET: ZEA; 1.85A {Medicago truncatula}
Probab=98.59 E-value=6.8e-07 Score=75.27 Aligned_cols=109 Identities=9% Similarity=0.152 Sum_probs=76.8
Q ss_pred CcEEEEEEEEEcCCHHHHHHHH-hChhh-hccccCC-cceeEEEEecCC--EEEEEEEeecceeeceEEEEeEEEEeecc
Q 025783 117 NSRRIRSKIEIDASLDTVWHIL-TDYEK-LADFVPN-LAVSQVVEKNDN--FVRLYQIGQQNLAFGIKFNAKGVLDCYEK 191 (248)
Q Consensus 117 ~~r~V~asi~V~ap~e~Vw~vL-TDYEr-yPeFIP~-~~~SrVLer~g~--~vrv~QVG~~~i~fg~~FtarvvLdvtE~ 191 (248)
|...+...+.|++||++||+++ .|+.+ .|+++|. ++++++++.+|+ .+|....+ ... +. .+-++ .+
T Consensus 7 g~~~~~~ei~i~apa~kvw~~~v~d~~~l~pk~~P~~v~s~e~~eGdgg~Gsir~~t~~-g~~--~~---~kErl--~~- 77 (168)
T 3rws_A 7 GVITSESEYVSSLSAEKLYRGIVEDGNIIYPKALPRFIEKAETLEGDGGPGTIKKLTFV-GDF--GS---TKQHI--DM- 77 (168)
T ss_dssp CEEEEEEEEEESSCHHHHHHHHHTSHHHHHHHHSTTTEEEEEEEESSSSTTCEEEEEES-SSS--CE---EEEEE--EE-
T ss_pred ceEEEEEEEEecCCHHHHHHHHhcCccccchhhCccccceEEEeeCCCCCCeEEEEEEc-CCC--eE---EEEEE--EE-
Confidence 4457889999999999999996 99999 6999996 888898988753 45543332 111 01 11112 21
Q ss_pred ccccCCCCCceEEEEEeecCC------CCceeeeEEEEEcCC-CeeEEEecccee
Q 025783 192 DLEIFPSGKKRDIEFKMIEGD------FQLFEGKWSIEQVTY-SCLQIIQNNIFV 239 (248)
Q Consensus 192 d~e~~P~g~~rrI~f~lVeGD------FK~feG~W~fep~~~-Gt~~vl~~~~~~ 239 (248)
..+ +++.+.|++++|| ++.|...|++.|.++ ||.+..+-.+.-
T Consensus 78 ---iD~--~~~~~sY~iiegd~l~~~p~~~y~~ti~v~p~~~ggs~v~wt~~y~~ 127 (168)
T 3rws_A 78 ---VDR--ENCAYTYSVYEGIALSDQPLEKIVFEFKLVPTPEEGCIVKSTTKYYT 127 (168)
T ss_dssp ---EET--TTTEEEEEECSSCCBTTBCEEEEEEEEEEEECTTSCEEEEEEEEEEE
T ss_pred ---Ecc--cCCEEEEEEEccCcccCcCceEEEEEEEEEECCCCceEEEEEEEEEE
Confidence 111 3589999999997 667999999999865 566766655543
No 24
>4a8u_A Major pollen allergen BET V 1-J; PR-10 protein; 1.16A {Betula pendula} PDB: 4a8v_A* 4a87_A* 4a81_A* 4a80_A* 4a83_A* 4a86_A* 4a85_A* 4a88_A 4a8g_A* 1b6f_A 1btv_A 1bv1_A 1fsk_A 4a84_A* 1llt_A 1fm4_A* 3k78_A 1qmr_A
Probab=98.58 E-value=1.1e-06 Score=73.00 Aligned_cols=110 Identities=12% Similarity=0.165 Sum_probs=76.4
Q ss_pred cEEEEEEEEEcCCHHHHHHHH-hChhh-hccccCC-cceeEEEEecCC--EEEEEEEeecceeeceEEEEeEEEEeeccc
Q 025783 118 SRRIRSKIEIDASLDTVWHIL-TDYEK-LADFVPN-LAVSQVVEKNDN--FVRLYQIGQQNLAFGIKFNAKGVLDCYEKD 192 (248)
Q Consensus 118 ~r~V~asi~V~ap~e~Vw~vL-TDYEr-yPeFIP~-~~~SrVLer~g~--~vrv~QVG~~~i~fg~~FtarvvLdvtE~d 192 (248)
.......+.|++||++||+++ .|+.+ .|+++|. ++++++++.+++ .+|....+..+- .. ..+=++ .+
T Consensus 2 ~~~~~~ei~i~a~a~kvw~~~~~d~~~l~pk~~P~~i~s~e~~eGdgg~Gsir~~~~~~g~~---~~-~~kErl--~~-- 73 (159)
T 4a8u_A 2 VFNYETEATSVIPAARLFKAFILDGDNLFPKVAPQAISSVENIEGNGGPGTIKKISFPEGFP---FK-YVKDRV--DE-- 73 (159)
T ss_dssp EEEEEEEEEESSCHHHHHHHHTTTHHHHHHHHCTTTCCEEEEEECSSSTTCEEEEECCTTSS---CS-EEEEEE--EE--
T ss_pred cEEEEEEEEecCCHHHHHHHHhcCccccchhhCchhccEEEEEcCCCCCceEEEEEEecCCC---cc-EEEEEE--EE--
Confidence 346788899999999999999 99999 5999995 788899988753 455433322110 00 111122 21
Q ss_pred cccCCCCCceEEEEEeecCC-----CCceeeeEEEEEcCC-CeeEEEecccee
Q 025783 193 LEIFPSGKKRDIEFKMIEGD-----FQLFEGKWSIEQVTY-SCLQIIQNNIFV 239 (248)
Q Consensus 193 ~e~~P~g~~rrI~f~lVeGD-----FK~feG~W~fep~~~-Gt~~vl~~~~~~ 239 (248)
..+ +++.+.|++++|| ++.|...|++.|.++ |+.+..+-.+.-
T Consensus 74 --iD~--~~~~~~y~iiegd~l~~~~~~y~~ti~v~p~~~ggs~v~wt~~y~~ 122 (159)
T 4a8u_A 74 --VDH--TNFKYSYSVIEGGPVGDTLEKISNEIKIVATPNGGSILKINNKYHT 122 (159)
T ss_dssp --EET--TTTEEEEEEEEETTCBTTEEEEEEEEEEEECTTSCEEEEEEEEEEE
T ss_pred --Ecc--ccCEEEEEEeeCCCCccceEEEEEEEEEEECCCCceEEEEEEEEEE
Confidence 111 3689999999998 478999999999866 566666655543
No 25
>3oqu_A Abscisic acid receptor PYL9; RCAR1, hormone receptor; HET: A8S; 2.68A {Arabidopsis thaliana}
Probab=98.56 E-value=8.6e-07 Score=77.35 Aligned_cols=98 Identities=14% Similarity=0.247 Sum_probs=69.7
Q ss_pred cEEEEEEE--EEcCCHHHHHHHHhChhhhccccCCcceeEEEEecC--CEEEEEEEeecceeeceEEEEeEEEEeecccc
Q 025783 118 SRRIRSKI--EIDASLDTVWHILTDYEKLADFVPNLAVSQVVEKND--NFVRLYQIGQQNLAFGIKFNAKGVLDCYEKDL 193 (248)
Q Consensus 118 ~r~V~asi--~V~ap~e~Vw~vLTDYEryPeFIP~~~~SrVLer~g--~~vrv~QVG~~~i~fg~~FtarvvLdvtE~d~ 193 (248)
..++..++ .|+||+++||++|.|+.++++|.|.++.+++ +.++ +.+|....+.. ..+ -. +.-++.+
T Consensus 49 ~~k~~~~V~~~I~ApadkVW~lV~Df~~l~kW~P~V~s~ev-eGdg~vGsVR~vt~~~G-~p~-~~----vkErL~~--- 118 (205)
T 3oqu_A 49 ENQCTSALVKHIKAPLHLVWSLVRRFDQPQKYKPFVSRCTV-IGDPEIGSLREVNVKSG-LPA-TT----STERLEL--- 118 (205)
T ss_dssp TTEEEEEEEEEESSCHHHHHHHHTCTTCGGGTCTTEEEEEC-CSSCCTTCEEEEEECTT-SSC-SE----EEEEEEE---
T ss_pred CcEEEEEEeeEEcCCHHHHHHHHhCcCChhHcCccceEEEe-eCCCCCCcEEEEEEcCC-Ccc-ce----EEEEEEE---
Confidence 35788888 9999999999999999999999999999975 4332 34554443321 100 00 1122222
Q ss_pred ccCCCCCceEEEEEeecCC--CCceeeeEEEEEcC-CC
Q 025783 194 EIFPSGKKRDIEFKMIEGD--FQLFEGKWSIEQVT-YS 228 (248)
Q Consensus 194 e~~P~g~~rrI~f~lVeGD--FK~feG~W~fep~~-~G 228 (248)
..+ +++.+.|++++|+ ++.|.+.+++.|.+ +|
T Consensus 119 -lDd--e~~~~sYsIieG~lpv~~Y~ati~V~p~~~dG 153 (205)
T 3oqu_A 119 -LDD--EEHILGIKIIGGDHRLKNYSSILTVHPEIIEG 153 (205)
T ss_dssp -EET--TTTEEEEEEEEESSSCTTCEEEEEEEEECCCC
T ss_pred -EEC--CCCEEEEEEEecCcceeEEEEEEEEEEccCCC
Confidence 122 3589999999996 89999999999988 45
No 26
>3k3k_A Abscisic acid receptor PYR1; ABA receptor, plant hormone receptor, A sensor, drought tolerance, plant development; HET: A8S; 1.70A {Arabidopsis thaliana} PDB: 3njo_A* 3qn1_A* 3k90_A* 3zvu_A* 3jrq_B* 3kdj_A* 3nef_A* 3neg_A* 3nmn_A* 3kay_A*
Probab=98.49 E-value=4.8e-07 Score=79.29 Aligned_cols=98 Identities=13% Similarity=0.185 Sum_probs=69.9
Q ss_pred EEEEEEEEcCCHHHHHHHHhChhhhccccCCcceeEEEEecC---CEEEEEEEeecceeeceEEEEeEEEEeeccccccC
Q 025783 120 RIRSKIEIDASLDTVWHILTDYEKLADFVPNLAVSQVVEKND---NFVRLYQIGQQNLAFGIKFNAKGVLDCYEKDLEIF 196 (248)
Q Consensus 120 ~V~asi~V~ap~e~Vw~vLTDYEryPeFIP~~~~SrVLer~g---~~vrv~QVG~~~i~fg~~FtarvvLdvtE~d~e~~ 196 (248)
.......|+||+++||++|.|+.+++.|.|.++.+++++.++ +.+|...++.. .. .. .. ..++.+ ..
T Consensus 51 ~~~v~~~I~ApadkVW~lv~dF~~l~~w~p~V~s~e~~eGd~g~vGsVR~lt~~~G-~p--~~-~v--kErL~~----lD 120 (211)
T 3k3k_A 51 SSLHAQRIHAPPELVWSIVRRFDKPQTYKHFIKSCSVEQNFEMRVGCTRDVIVISG-LP--AN-TS--TERLDI----LD 120 (211)
T ss_dssp EEEEEEEESSCHHHHHHHHTCTTCGGGTCSSEEEEECCTTCCCCTTCEEEEEESSS-SS--CE-EE--EEEEEE----EE
T ss_pred eEEEEEEEcCCHHHHHHHHhCcCChhHcCccceEEEEecCCCCCCCcEEEEEecCC-Cc--cc-eE--EEEEEE----Ee
Confidence 344455899999999999999999999999999999876543 44665444322 10 01 11 112222 11
Q ss_pred CCCCceEEEEEeecCC--CCceeeeEEEEEcCCCe
Q 025783 197 PSGKKRDIEFKMIEGD--FQLFEGKWSIEQVTYSC 229 (248)
Q Consensus 197 P~g~~rrI~f~lVeGD--FK~feG~W~fep~~~Gt 229 (248)
+ +++.+.|++++|| ++.|.+.+++.|.++|+
T Consensus 121 d--~~~~~sYsIieg~lpv~~Y~sti~V~p~~~gg 153 (211)
T 3k3k_A 121 D--ERRVTGFSIIGGEHRLTNYKSVTTVHRFEKEN 153 (211)
T ss_dssp T--TTTEEEEEEEEETTGGGTCEEEEEEEEEEETT
T ss_pred c--cCCEEEEEEeecCcceeEEEEEEEEEECCCCC
Confidence 2 3589999999997 89999999999988775
No 27
>3ie5_A Phenolic oxidative coupling protein HYP-1; hypericin, ST JOHN'S WORT, depression, allergy, PR-10 protein, cytokinin, plant hormones; HET: PGE PG4 PE8 1PE; 1.69A {Hypericum perforatum} SCOP: d.129.3.0
Probab=98.48 E-value=2.4e-06 Score=71.67 Aligned_cols=111 Identities=11% Similarity=0.083 Sum_probs=77.8
Q ss_pred CcEEEEEEEEEcCCHHHHHHH-HhChhhh-ccccCC-cceeEEEEecC--CEEEEEEEeecceeeceEEEEeEEEEeecc
Q 025783 117 NSRRIRSKIEIDASLDTVWHI-LTDYEKL-ADFVPN-LAVSQVVEKND--NFVRLYQIGQQNLAFGIKFNAKGVLDCYEK 191 (248)
Q Consensus 117 ~~r~V~asi~V~ap~e~Vw~v-LTDYEry-PeFIP~-~~~SrVLer~g--~~vrv~QVG~~~i~fg~~FtarvvLdvtE~ 191 (248)
|...+...+.|++|+++||++ +.|+.++ |+++|. ++++++++.+| +.+|....+..+- .. ..+=++ ..-
T Consensus 8 g~~~~~~ev~i~a~a~kvw~~~v~d~~~l~pk~~P~~v~s~e~~eGdg~~Gsir~~~~~~g~~---~~-~~kErl--~~i 81 (165)
T 3ie5_A 8 AAYTIVKEEESPIAPHRLFKALVLERHQVLVKAQPHVFKSGEIIEGDGGVGTVTKITFVDGHP---LT-YMLHKF--DEI 81 (165)
T ss_dssp SCEEEEEEEEESSCHHHHHHHHTTTHHHHHHHHCTTTEEEEEEEESSSSTTCEEEEEECTTSS---CC-EEEEEE--EEE
T ss_pred eeEEEEEEEEecCCHHHHHHHhcCCccccchhhCCcccceEEEecCCCCCCeEEEEEecCCCC---Cc-eEEEEE--EEE
Confidence 456889999999999999999 5999999 999996 78888888765 3455433332210 01 111112 111
Q ss_pred ccccCCCCCceEEEEEeecCC-----CCceeeeEEEEEcCCCeeEEEecccee
Q 025783 192 DLEIFPSGKKRDIEFKMIEGD-----FQLFEGKWSIEQVTYSCLQIIQNNIFV 239 (248)
Q Consensus 192 d~e~~P~g~~rrI~f~lVeGD-----FK~feG~W~fep~~~Gt~~vl~~~~~~ 239 (248)
.+ +++.+.|++++|| ++.|....++...++||.+..+-.+.-
T Consensus 82 ----D~--~~~~~~Y~iieG~~l~~~~~~y~~~i~v~~~~ggs~vkwt~~y~~ 128 (165)
T 3ie5_A 82 ----DA--ANFYCKYTLFEGDVLRDNIEKVVYEVKLEAVGGGSKGKITVTYHP 128 (165)
T ss_dssp ----EG--GGTEEEEEEEEEGGGTTTEEEEEEEEEEEEETTEEEEEEEEEEEE
T ss_pred ----ch--hcCEEEEEEecCCCCccceEEEEEEEEEEeCCCceEEEEEEEEEE
Confidence 11 3689999999997 788999999995556677777766653
No 28
>3jrs_A PYL1, putative uncharacterized protein AT5G46790; plant hormone receptor, abscisic acid, hormone recepto; HET: A8S; 2.05A {Arabidopsis thaliana}
Probab=98.45 E-value=1.2e-06 Score=76.50 Aligned_cols=105 Identities=12% Similarity=0.143 Sum_probs=69.0
Q ss_pred EEEEEEEEcCCHHHHHHHHhChhhhccccCCcceeEEEEecC---CEEEEEEEeecceeeceEEEEeEEEEeeccccccC
Q 025783 120 RIRSKIEIDASLDTVWHILTDYEKLADFVPNLAVSQVVEKND---NFVRLYQIGQQNLAFGIKFNAKGVLDCYEKDLEIF 196 (248)
Q Consensus 120 ~V~asi~V~ap~e~Vw~vLTDYEryPeFIP~~~~SrVLer~g---~~vrv~QVG~~~i~fg~~FtarvvLdvtE~d~e~~ 196 (248)
.......|+||+++||++|.|+.++++|.|.++.+++++.++ +.+|....... .. .. . +.-++.+ ..
T Consensus 55 ~~~v~~~I~ApadkVW~lv~Df~~l~~w~p~V~s~e~~eGd~g~vGsVR~lt~~~G-~p--~~-~--vkErL~~----lD 124 (208)
T 3jrs_A 55 SSLLAQRIHAPPETVWSVVRRFDRPQIYKHFIKSCNVSEDFEMRVGCTRDVNVISG-LP--AN-T--SRERLDL----LD 124 (208)
T ss_dssp EEEEEEEESSCHHHHHHHHTCTTCGGGTCTTEEEEECCTTCCCSTTCEEEEEECTT-SS--CC-E--EEEEEEE----EE
T ss_pred eEEEEEEEeCCHHHHHHHHhCcCChhHccccceEEEEecCCCCCCCeEEEEEecCC-Cc--cc-e--EEEEEEE----Ee
Confidence 334455899999999999999999999999999999876542 34655443221 10 00 0 1122222 12
Q ss_pred CCCCceEEEEEeecCC--CCceeeeEEEEEcC--CCeeEEEecc
Q 025783 197 PSGKKRDIEFKMIEGD--FQLFEGKWSIEQVT--YSCLQIIQNN 236 (248)
Q Consensus 197 P~g~~rrI~f~lVeGD--FK~feG~W~fep~~--~Gt~~vl~~~ 236 (248)
+ +++.+.|++++|| ++.|.+..++.|.+ +||.+.-+-.
T Consensus 125 d--e~~~~sYsIieG~lpv~~Y~sti~V~p~~~g~~t~V~Wt~~ 166 (208)
T 3jrs_A 125 D--DRRVTGFSITGGEHRLRNYKSVTTVHRFEKEEEEERIWTVV 166 (208)
T ss_dssp T--TTTEEEEEEEESSSSCTTCEEEEEEEEEEC-----CEEEEE
T ss_pred c--cCCEEEEEEeeCCcceeeEEEEEEEEEccCCCccEEEEEEE
Confidence 2 3588999999997 89999999999964 3565544433
No 29
>2qpv_A Uncharacterized protein ATU1531; structural genomics, PSI protein structure initiative, midwest center for structural genomics; 2.35A {Agrobacterium tumefaciens str} SCOP: d.129.3.8
Probab=98.34 E-value=4.2e-06 Score=69.32 Aligned_cols=103 Identities=7% Similarity=-0.013 Sum_probs=66.7
Q ss_pred EEEEEEEEcCCHHHHHHHHhChhhhccccCCcceeEEEEecCCEEEEEEEeecceeeceEEEEeEEEEeeccccccCCCC
Q 025783 120 RIRSKIEIDASLDTVWHILTDYEKLADFVPNLAVSQVVEKNDNFVRLYQIGQQNLAFGIKFNAKGVLDCYEKDLEIFPSG 199 (248)
Q Consensus 120 ~V~asi~V~ap~e~Vw~vLTDYEryPeFIP~~~~SrVLer~g~~vrv~QVG~~~i~fg~~FtarvvLdvtE~d~e~~P~g 199 (248)
.+..++.|++|+++||++++|.|+||+|+|+|+++ +...++...+. ...+ |. .++.+ .+.+ .+
T Consensus 28 ~~~~si~I~ap~eeVy~~~~D~e~lP~W~~~l~~~--~~~~~~~w~a~---~~p~--G~---v~v~~--~~~~--~~--- 90 (156)
T 2qpv_A 28 SRIIHLSVEKPWAEVYDFAANPGNMPRWAAGLAGG--LEADGEDWIAK---GGPL--GE---VRVNF--APHN--EF--- 90 (156)
T ss_dssp EEEEEEEESSCHHHHHHHHHCGGGGGGTCGGGTTC--CEEETTEEEEE---CSSS--CE---EEEEE--CCCC--SS---
T ss_pred ceEEEEEEcCCHHHHHHHHHChhhHHHHHHhhhhh--cccCCCcEEEe---ccCC--Cc---EEEEE--ecCC--Cc---
Confidence 45889999999999999999999999999999986 44555544332 1222 21 12222 2210 00
Q ss_pred CceEEEEEeecCCCCceeeeEEEEEcCCCeeEEEeccceecccC
Q 025783 200 KKRDIEFKMIEGDFQLFEGKWSIEQVTYSCLQIIQNNIFVKLCI 243 (248)
Q Consensus 200 ~~rrI~f~lVeGDFK~feG~W~fep~~~Gt~~vl~~~~~~~~~~ 243 (248)
...+.+..+.+.. ...+.|++.+.++||++.++. ++++++
T Consensus 91 -gv~d~~~~l~~g~-~~~~~~rv~p~g~GTeV~~tl--~~~pg~ 130 (156)
T 2qpv_A 91 -GVIDHVVTLPDGL-KVYNALRVTPNGSGTEVSFTL--LRLEGM 130 (156)
T ss_dssp -CBCCEEEECTTSC-EEEEEEEEEEETTEEEEEEEE--ECCTTC
T ss_pred -eEEEEEEecCCCc-EEEEEEEEEeCCCCEEEEEEE--ecCCCC
Confidence 1223444444322 367789999999999998886 355554
No 30
>1z94_A Conserved hypothetical protein; NESG, CV1439, structural genomics, PSI structure initiative; 2.10A {Chromobacterium violaceum} SCOP: d.129.3.5
Probab=98.32 E-value=9.3e-06 Score=62.88 Aligned_cols=106 Identities=13% Similarity=0.124 Sum_probs=67.9
Q ss_pred EEEEEEEEcCCHHHHHHHHhChhhhccccCCc--c--eeEEEEecCCEEEEEEE-eecceeeceEEEEeEEEEeeccccc
Q 025783 120 RIRSKIEIDASLDTVWHILTDYEKLADFVPNL--A--VSQVVEKNDNFVRLYQI-GQQNLAFGIKFNAKGVLDCYEKDLE 194 (248)
Q Consensus 120 ~V~asi~V~ap~e~Vw~vLTDYEryPeFIP~~--~--~SrVLer~g~~vrv~QV-G~~~i~fg~~FtarvvLdvtE~d~e 194 (248)
.+..++.|+||+++||+++||-++|+++.+.- . ...+-.+.|+..+.... +..+. ...+..+ +.+
T Consensus 4 ~~~~~~~i~ap~e~Vw~altd~~~~~~W~~~~~~~~~~~~~~~~~Gg~~~~~~~~~~~g~--~~~~~~~----v~~---- 73 (147)
T 1z94_A 4 TIRLHRVLSAPPERVYRAFLDPLALAKWLPPEGFVCKVLEHDARVGGAYKMEFLAFASGQ--KHAFGGR----YLE---- 73 (147)
T ss_dssp CEEEEEEESSCHHHHHHHTTCHHHHHHHSSCTTEEEEEEEECCSTTCEEEEEEEETTTCC--EEEEEEE----EEE----
T ss_pred EEEEEEEeCCCHHHHHHHhCCHHHHhhccCCCCEeeeEEEEccCCCcEEEEEEEECCCCC--EEEEEEE----EEE----
Confidence 57788899999999999999999999998742 1 12222334555543221 11111 1222222 222
Q ss_pred cCCCCCceEEEEEeecC--CCC-ceeeeEEEEEcCCCeeEEEeccce
Q 025783 195 IFPSGKKRDIEFKMIEG--DFQ-LFEGKWSIEQVTYSCLQIIQNNIF 238 (248)
Q Consensus 195 ~~P~g~~rrI~f~lVeG--DFK-~feG~W~fep~~~Gt~~vl~~~~~ 238 (248)
..| +++|.|+...+ ++. .....|.|++.++||+..++-..+
T Consensus 74 ~~p---~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~gT~l~~~~~~~ 117 (147)
T 1z94_A 74 LVP---GERIRYTDRFDDAGLPGDMITTITLAPLSCGADLSIVQEGI 117 (147)
T ss_dssp EET---TTEEEEEEEESCCC---CEEEEEEEEEETTEEEEEEEEECC
T ss_pred EcC---CCEEEEEEEEeCCCCCCcEEEEEEEEecCCCEEEEEEEEcC
Confidence 123 37899988754 243 578999999999999998887654
No 31
>2leq_A Uncharacterized protein; start domains, structural genomics, PSI-biology, protein STR initiative; NMR {Cytophaga hutchinsonii}
Probab=98.31 E-value=1.4e-05 Score=61.53 Aligned_cols=106 Identities=8% Similarity=0.036 Sum_probs=67.6
Q ss_pred cEEEEEEEEEcCCHHHHHHHHhChhhhccccCCcceeEEEEecCCEEEEEEEeecceeeceEEEEeEEEEeeccccccCC
Q 025783 118 SRRIRSKIEIDASLDTVWHILTDYEKLADFVPNLAVSQVVEKNDNFVRLYQIGQQNLAFGIKFNAKGVLDCYEKDLEIFP 197 (248)
Q Consensus 118 ~r~V~asi~V~ap~e~Vw~vLTDYEryPeFIP~~~~SrVLer~g~~vrv~QVG~~~i~fg~~FtarvvLdvtE~d~e~~P 197 (248)
...|..++.|+||+++||++|+|.++|++|.+... +..--+.|+..+.. ....+. .+.+..+ +.+ ..|
T Consensus 4 ~~~i~~~~~i~ap~e~Vw~~ltd~~~~~~W~~~~~-~~~~~~~G~~~~~~-~~~~g~--~~~~~~~----v~~----~~p 71 (146)
T 2leq_A 4 KLIAQVKTVINAPIEKVWEALVNPEIIKEYMFGTT-VVSDWKEGSQIVWK-GEWKGK--AYEDKGT----ILQ----FNE 71 (146)
T ss_dssp CEEEEEEEEECSCHHHHHHHHSCTTHHHHHSSSCE-EECCCSTTCEEEEE-EEETTE--EEEEEEE----EEE----EET
T ss_pred CceEEEEEEECCCHHHHHHHHcCHHHhceeEcCCc-ceeccCCCCEEEEE-ecCCCc--eecccEE----EEE----EcC
Confidence 46899999999999999999999999999964221 11112455555432 111111 1122222 222 123
Q ss_pred CCCceEEEEEeecC-------CCCceeeeEEEEEcCCCeeEEEeccce
Q 025783 198 SGKKRDIEFKMIEG-------DFQLFEGKWSIEQVTYSCLQIIQNNIF 238 (248)
Q Consensus 198 ~g~~rrI~f~lVeG-------DFK~feG~W~fep~~~Gt~~vl~~~~~ 238 (248)
+++|.|+...+ +-......|.|++.++||++.++-..|
T Consensus 72 ---~~~l~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~gT~l~~~~~~~ 116 (146)
T 2leq_A 72 ---RSILQYSHFSPLTGKPDLPENYHVVTITLTALKKGVEVELTQDNN 116 (146)
T ss_dssp ---TTEEEEECBCGGGCCCSCGGGSCEEEEEEEECSSCEEEEEEEEEE
T ss_pred ---CCEEEEEEccCccCCCCCCCCceEEEEEEEEcCCCeEEEEEEecC
Confidence 37899887632 112578899999999999988876544
No 32
>2lcg_A Uncharacterized protein; start domain, structural genomics, northeast structural GENO consortium, NESG, unknown function, AHSA1; NMR {Ralstonia metallidurans}
Probab=98.28 E-value=1.7e-05 Score=62.42 Aligned_cols=101 Identities=12% Similarity=0.189 Sum_probs=64.7
Q ss_pred EEEEEEEEcCCHHHHHHHHhChhhhccc-cCC--cc--eeEEEEecCCEEEEEEEeecceeeceEEEEeEEEEeeccccc
Q 025783 120 RIRSKIEIDASLDTVWHILTDYEKLADF-VPN--LA--VSQVVEKNDNFVRLYQIGQQNLAFGIKFNAKGVLDCYEKDLE 194 (248)
Q Consensus 120 ~V~asi~V~ap~e~Vw~vLTDYEryPeF-IP~--~~--~SrVLer~g~~vrv~QVG~~~i~fg~~FtarvvLdvtE~d~e 194 (248)
.+..++.|+||+++||++|||-+++++| .+. +. ...+-.+.|+..+....+..+- ....+..+ +.+
T Consensus 2 ~i~~~~~i~ap~e~Vw~altd~~~~~~W~~~~~~~~~~~~~~d~~~Gg~~~~~~~~~~g~-~~~~~~~~----v~~---- 72 (142)
T 2lcg_A 2 NITVETTVAAPVGKVWRAYTTPEDIKQWNAASDDWHTTAATVDLREGGAFSSRMEAKDGS-MGFDFAGT----YTK---- 72 (142)
T ss_dssp EEEEEEEESSCHHHHHHHTTCHHHHHHHCCSSTTEEEEEEEECCSTTCEEEEEEEETTSS-CEEEEEEE----EEE----
T ss_pred eEEEEEEeCCCHHHHHHHhCCHHHHhcCCCCCCCccceeeEEccccCCEEEEEEEcCCCC-ceeeeEEE----EEE----
Confidence 4778899999999999999999999999 652 21 2222233556554432221110 00222222 222
Q ss_pred cCCCCCceEEEEEeecCCCCceeeeEEEEEcCCCeeEEEeccc
Q 025783 195 IFPSGKKRDIEFKMIEGDFQLFEGKWSIEQVTYSCLQIIQNNI 237 (248)
Q Consensus 195 ~~P~g~~rrI~f~lVeGDFK~feG~W~fep~~~Gt~~vl~~~~ 237 (248)
..| +++|.|+. .| ....|.|++.++||+..++-+.
T Consensus 73 ~~p---~~~l~~~~-~g----~~~~~~l~~~~~gT~l~~~~~~ 107 (142)
T 2lcg_A 73 VVE---NKRIEYAF-GD----RTAKVEFLEAPQGVTVRVSFVA 107 (142)
T ss_dssp EET---TTEEEEEE-TT----EEEEEEEEEETTEEEEEEEEEC
T ss_pred EcC---CCEEEEEc-CC----CEEEEEEEEcCCCEEEEEEEec
Confidence 123 37899987 34 7889999999999998887443
No 33
>3kl1_A PYL2, putative uncharacterized protein AT2G26040; abscisic acid receptor, crystal, high resolution, PP2C, HORM receptor; 1.55A {Arabidopsis thaliana} PDB: 3kdi_A* 3kdh_A 3nr4_A* 3ns2_A* 3nj0_A* 3nj1_A* 3nmh_A* 3kaz_A 3kb0_A* 3kb3_A* 3ujl_A* 3nmp_A* 3nmt_A* 3nmv_A*
Probab=98.26 E-value=1.4e-05 Score=68.48 Aligned_cols=106 Identities=11% Similarity=0.204 Sum_probs=72.9
Q ss_pred EEEEEcCCHHHHHHHHhChhhhccccCCcceeEEEEecC--CEEEEEEEeecceeeceEEEEeEEEEeeccccccCCCCC
Q 025783 123 SKIEIDASLDTVWHILTDYEKLADFVPNLAVSQVVEKND--NFVRLYQIGQQNLAFGIKFNAKGVLDCYEKDLEIFPSGK 200 (248)
Q Consensus 123 asi~V~ap~e~Vw~vLTDYEryPeFIP~~~~SrVLer~g--~~vrv~QVG~~~i~fg~~FtarvvLdvtE~d~e~~P~g~ 200 (248)
....|++|+++||+++.|+.+.+.+.|.++++++++.+| +.+|....+.. . .... .+=++ .+ ..+ +
T Consensus 39 ~~~~I~Apa~~vW~lv~df~~~~~w~p~I~s~e~~eGdg~vGsVR~~t~~~G-~--p~~~-vkErL--~~----iD~--~ 106 (190)
T 3kl1_A 39 ITQRIHAPASVVWPLIRRFDNPERYKHFVKRCRLISGDGDVGSVREVTVISG-L--PAST-STERL--EF----VDD--D 106 (190)
T ss_dssp EEEEESSCHHHHHHHHHCTTCGGGTCSSEEEEEEEESSSSTTCEEEEEECSS-S--SCEE-EEEEE--EE----EET--T
T ss_pred EEEEecCCHHHHHHHHhCCCChhHcccccCEEEEEcCCCCCCeEEEEEecCC-C--ccce-EEEEE--EE----Eec--c
Confidence 344899999999999999999878889999999987765 35665444322 1 0111 11122 22 112 3
Q ss_pred ceEEEEEeecCC--CCceeeeEEEEEc-----CC-CeeEEEeccceec
Q 025783 201 KRDIEFKMIEGD--FQLFEGKWSIEQV-----TY-SCLQIIQNNIFVK 240 (248)
Q Consensus 201 ~rrI~f~lVeGD--FK~feG~W~fep~-----~~-Gt~~vl~~~~~~~ 240 (248)
++.+.|++++|| ++.|++...+.+. ++ ||.+.-.-.+-.|
T Consensus 107 ~~~~sY~iieG~~~~~~Y~s~~~v~~~~~~~~~~~gt~V~Ws~~f~~p 154 (190)
T 3kl1_A 107 HRVLSFRVVGGEHRLKNYKSVTSVNEFLNQDSGKVYTVVLESYTVDIP 154 (190)
T ss_dssp TTEEEEEEEEESSSCCSCEEEEEEEEEEC-CCCCEEEEEEEEEEEECC
T ss_pred CCEEEEEEEecCCccccEEEEEEEEecccccCCCCcEEEEEEEEEEcC
Confidence 589999999997 6899999999984 33 5666666555444
No 34
>2lgh_A Uncharacterized protein; AHSA1, start domain, COG3832, PF08327, HSP90, heat shock, ST genomics, PSI-biology; NMR {Aeromonas hydrophila subsp}
Probab=98.25 E-value=2.8e-05 Score=61.75 Aligned_cols=102 Identities=13% Similarity=0.101 Sum_probs=66.8
Q ss_pred EEEEEEEEcCCHHHHHHHHhChhhhccc-cCC----cceeEEEEecCCEEEEEEEeecceeeceEEEEeEEEEeeccccc
Q 025783 120 RIRSKIEIDASLDTVWHILTDYEKLADF-VPN----LAVSQVVEKNDNFVRLYQIGQQNLAFGIKFNAKGVLDCYEKDLE 194 (248)
Q Consensus 120 ~V~asi~V~ap~e~Vw~vLTDYEryPeF-IP~----~~~SrVLer~g~~vrv~QVG~~~i~fg~~FtarvvLdvtE~d~e 194 (248)
.+..++.|+||+++||+++||-+++++| ++- +...++-.+.|+..+....+..+- ..+.+..+ ++++
T Consensus 2 ~i~~~~~i~Ap~e~Vw~altdp~~~~~W~~~p~~~~~~~~~~d~~~Gg~~~~~~~~~~G~-~~~~~~g~-v~e~------ 73 (144)
T 2lgh_A 2 KISIEAHIEQEIEAVWWAWNDPDCIARWNAASSDWHTTGSRVDLVVGGRFCHHMAAKDGS-AGFDFTGT-FTRV------ 73 (144)
T ss_dssp EEEEEEEESSCHHHHHHHHHCHHHHTTSSSCSTTEEEEEEEECCSTTCEEEEEEEETTSS-CEEEEEEE-EEEE------
T ss_pred EEEEEEEeCCCHHHHHHHhCCHHHHhccCCCCCCcccceEEECCCCCCEEEEEEECCCCC-ceEEeEEE-EEEE------
Confidence 4778899999999999999999999999 653 223333344666665432222110 01222222 2222
Q ss_pred cCCCCCceEEEEEeecCCCCceeeeEEEEEcCCCeeEEEeccc
Q 025783 195 IFPSGKKRDIEFKMIEGDFQLFEGKWSIEQVTYSCLQIIQNNI 237 (248)
Q Consensus 195 ~~P~g~~rrI~f~lVeGDFK~feG~W~fep~~~Gt~~vl~~~~ 237 (248)
.| +++|.|+. .| .....|.|++.++||+..++-..
T Consensus 74 -~p---~~~l~~~~-~~---~~~~~~~l~~~~~gT~l~~~~~~ 108 (144)
T 2lgh_A 74 -EA---PTRLSFVM-DD---GREVDVQFASEPGGTWVQETFDA 108 (144)
T ss_dssp -ET---TTEEEEEE-TT---CCEEEEEEEEETTEEEEEEEEEC
T ss_pred -eC---CCEEEEEe-cC---CcEEEEEEEEcCCCEEEEEEEEC
Confidence 23 47899995 34 36789999999999988887654
No 35
>1xuv_A Hypothetical protein MM0500; alpha-beta protein, northeast structural genomics consortium, NESG, structural genomics; 2.10A {Methanosarcina mazei GO1} SCOP: d.129.3.5
Probab=98.24 E-value=4.9e-05 Score=62.30 Aligned_cols=109 Identities=14% Similarity=0.076 Sum_probs=70.4
Q ss_pred CCCcEEEEEEEEEcCCHHHHHHHHhChhhhccccCC----cceeEEEEecCCEEEEEEEeecceeeceEEEEeEEEEeec
Q 025783 115 GRNSRRIRSKIEIDASLDTVWHILTDYEKLADFVPN----LAVSQVVEKNDNFVRLYQIGQQNLAFGIKFNAKGVLDCYE 190 (248)
Q Consensus 115 ~~~~r~V~asi~V~ap~e~Vw~vLTDYEryPeFIP~----~~~SrVLer~g~~vrv~QVG~~~i~fg~~FtarvvLdvtE 190 (248)
..+.+.+..++.|+||+++||+++||-+++++|++. +....+-.+.|+..+....+..+ ..+....+ +.+
T Consensus 18 ~~~~~~i~~~r~i~Ap~e~Vw~altdpe~~~~W~~~~~~~~~~~~~d~~~Gg~~~~~~~~~~G----~~~~~~~~--v~e 91 (178)
T 1xuv_A 18 EPGKQEIIITREFDAPRELVFKAFTDPDLYTQWIGPRGFTTALKIFEPKNGGSWQYIQKDPEG----NEYAFHGV--NHD 91 (178)
T ss_dssp CTTCSEEEEEEEESSCHHHHHHHHHCHHHHTTTCSSTTCEEEEEEECCSTTCEEEEEEECTTS----CEEEEEEE--EEE
T ss_pred CCCCcEEEEEEEECCCHHHHHHHhCCHHHHHhCCCCCCccceEEEEecccCCEEEEEEECCCC----CEEEEEEE--EEE
Confidence 445678999999999999999999999999999753 12223223456665543222111 22222222 222
Q ss_pred cccccCCCCCceEEEEEeecC--C--CCceeeeEEEEEcC-CCeeEEEecc
Q 025783 191 KDLEIFPSGKKRDIEFKMIEG--D--FQLFEGKWSIEQVT-YSCLQIIQNN 236 (248)
Q Consensus 191 ~d~e~~P~g~~rrI~f~lVeG--D--FK~feG~W~fep~~-~Gt~~vl~~~ 236 (248)
..| +++|.|+..-+ + -......|.|++.+ +||+..++-.
T Consensus 92 ----~~p---~~rl~~~~~~~~~~~~~~~~~v~~~l~~~~~ggT~lt~~~~ 135 (178)
T 1xuv_A 92 ----VTE---PERIISTFEFEGLPEKGHVILDTARFEALPGDRTKLTSHSV 135 (178)
T ss_dssp ----EET---TTEEEEEEEETTSSSSCCCEEEEEEEEEETTTEEEEEEEEE
T ss_pred ----EeC---CCEEEEEEEecCCCCCCCcEEEEEEEEEcCCCCEEEEEEEE
Confidence 223 37888887643 2 23578899999998 7898888765
No 36
>2l8o_A Uncharacterized protein; mixed alpha-beta protein, PSI-biology, structural genomics, structure initiative; NMR {Cytophaga hutchinsonii}
Probab=98.21 E-value=2e-05 Score=62.61 Aligned_cols=103 Identities=9% Similarity=0.110 Sum_probs=67.0
Q ss_pred EEEEEEEEEcCCHHHHHHHHhChhhhccc-cCC----cceeEEEEecCCEEEEEEEeecceeeceEEEEeEEEEeecccc
Q 025783 119 RRIRSKIEIDASLDTVWHILTDYEKLADF-VPN----LAVSQVVEKNDNFVRLYQIGQQNLAFGIKFNAKGVLDCYEKDL 193 (248)
Q Consensus 119 r~V~asi~V~ap~e~Vw~vLTDYEryPeF-IP~----~~~SrVLer~g~~vrv~QVG~~~i~fg~~FtarvvLdvtE~d~ 193 (248)
+.|..++.|+||+++||+++||-+++++| ++- +...++-.+.|+..+....+..+- ....+..+ ++++
T Consensus 2 ~~i~~~~~i~Ap~e~Vw~altdpe~~~~W~~~p~~~~~~~~~~d~~~Gg~~~~~~~~~~G~-~~~~~~g~-v~e~----- 74 (144)
T 2l8o_A 2 NKITVEVTVYAAIEKVWKYWNEPAHIMKWCQASPEWHVPAAQNDLKAGGTFTTTMAAKDGS-MSFDFGGV-YDQV----- 74 (144)
T ss_dssp CSEEEEEEECSCHHHHHHHHHCHHHHHHHSTTCTTCEEEEEECCCSTTCEEEEEEECTTSS-CEEEEEEE-EEEE-----
T ss_pred cEEEEEEEECCCHHHHHHHHCCHHHHhhccCCCCCcccceeEEccCCCCEEEEEEECCCCC-ceeeeeEE-EEEE-----
Confidence 35788999999999999999999999999 653 222333334566665432221110 00222222 2222
Q ss_pred ccCCCCCceEEEEEeecCCCCceeeeEEEEEcCCCeeEEEeccc
Q 025783 194 EIFPSGKKRDIEFKMIEGDFQLFEGKWSIEQVTYSCLQIIQNNI 237 (248)
Q Consensus 194 e~~P~g~~rrI~f~lVeGDFK~feG~W~fep~~~Gt~~vl~~~~ 237 (248)
.| +++|.|+. .| .....|.|++.++||+..++-..
T Consensus 75 --~p---~~~l~~~~-~g---~~~v~~~l~~~~~gT~l~~~~~~ 109 (144)
T 2l8o_A 75 --KT---NDLIEYTI-GD---GRKVRIVFTHTGDTTNIVESFDP 109 (144)
T ss_dssp --ET---TTEEEEEE-TT---CCEEEEEEEECSSSEEEEEEECC
T ss_pred --eC---CCEEEEEe-CC---CeEEEEEEEEcCCCEEEEEEEeC
Confidence 23 47899996 34 36788999999999998887554
No 37
>2il5_A Hypothetical protein; structural genomics, APC23650, PSI-2, structure initiative; 2.30A {Staphylococcus aureus subsp} SCOP: d.129.3.5
Probab=98.20 E-value=4.4e-05 Score=61.50 Aligned_cols=110 Identities=7% Similarity=-0.030 Sum_probs=71.3
Q ss_pred CcEEEEEEEEEcCCHHHHHHHHhChhhhccccCC----cceeEEEEecCCEEEEEEEeecceeeceEEEEeEEEEeeccc
Q 025783 117 NSRRIRSKIEIDASLDTVWHILTDYEKLADFVPN----LAVSQVVEKNDNFVRLYQIGQQNLAFGIKFNAKGVLDCYEKD 192 (248)
Q Consensus 117 ~~r~V~asi~V~ap~e~Vw~vLTDYEryPeFIP~----~~~SrVLer~g~~vrv~QVG~~~i~fg~~FtarvvLdvtE~d 192 (248)
..+.|..++.|+||+++||+++||-+++++|.+. +..+++-.+.|+..+....+..+ ..+....+ +.+
T Consensus 12 ~~~~i~~~~~i~ap~e~Vw~altdp~~~~~W~~p~~~~~~~~~~d~~~Gg~~~~~~~~~~G----~~~~~~~~--v~e-- 83 (171)
T 2il5_A 12 EHVEVEIEKLYKFSPELVYEAWTKKDLLKQWFMTSARTNKEIEADVKEGGKYRIVDQQRNG----KVNVIEGI--YES-- 83 (171)
T ss_dssp EEEEEEEEEEESSCHHHHHHHTTCHHHHTTTSSSCTTTEEEEEECCSTTCEEEEEEECGGG----CEEEEEEE--EEE--
T ss_pred CCceEEEEEEeCCCHHHHHHHHCCHHHHHhccCCCCccceEEEecccCCCEEEEEEECCCC----CEEEEEEE--EEE--
Confidence 3468999999999999999999999999999842 22333333456665543222111 22222221 222
Q ss_pred cccCCCCCceEEEEEeecCCC--CceeeeEEEEEcCC-CeeEEEecccee
Q 025783 193 LEIFPSGKKRDIEFKMIEGDF--QLFEGKWSIEQVTY-SCLQIIQNNIFV 239 (248)
Q Consensus 193 ~e~~P~g~~rrI~f~lVeGDF--K~feG~W~fep~~~-Gt~~vl~~~~~~ 239 (248)
..| +++|.|+...++. ....-.|.|++.++ ||+..++-..|-
T Consensus 84 --~~p---~~rl~~~~~~~~~~~~~~~~~~~l~~~~~g~T~l~~~~~~~~ 128 (171)
T 2il5_A 84 --LVM---DEYVKMTIGMPGLSETQDVIEVEFFERETGGTQMLFYYRSLV 128 (171)
T ss_dssp --EET---TTEEEEEESCC--CCCCEEEEEEEEECSSSSEEEEEEEEEEE
T ss_pred --EcC---CCEEEEEEEecCCCCCcEEEEEEEEECCCCCEEEEEEEEecc
Confidence 123 4789998875443 24678999999998 899888775554
No 38
>3pu2_A Uncharacterized protein; SRPBCC superfamily, PSI-biology, NESG, RHR263, structural GE protein structure initiative; HET: MSE; 2.61A {Rhodobacter sphaeroides}
Probab=98.18 E-value=5.2e-05 Score=61.68 Aligned_cols=109 Identities=11% Similarity=0.100 Sum_probs=71.0
Q ss_pred CCCcEEEEEEEEEcCCHHHHHHHHhChhhhccccCC----cceeEEEEecCCEEEEEEEeecceeeceEEEEeEEEEeec
Q 025783 115 GRNSRRIRSKIEIDASLDTVWHILTDYEKLADFVPN----LAVSQVVEKNDNFVRLYQIGQQNLAFGIKFNAKGVLDCYE 190 (248)
Q Consensus 115 ~~~~r~V~asi~V~ap~e~Vw~vLTDYEryPeFIP~----~~~SrVLer~g~~vrv~QVG~~~i~fg~~FtarvvLdvtE 190 (248)
..+.+.|..++.|+||+++||+++||-+.+++|.+. +..+.+-.+.|+..+....+..+ ..+....++ .+
T Consensus 9 ~~~~~~i~~~~~i~Ap~e~Vw~altdp~~~~~W~~~~~~~~~~~~~d~~~Gg~~~~~~~~~~G----~~~~~~g~v--~e 82 (164)
T 3pu2_A 9 PGSATRLEFRRHFAATPEQLWAALTSPALLPAWLFARGWPMTECVFEPHKGGLIRQVWTGPEG----RTRGLTGRV--IL 82 (164)
T ss_dssp CCBTTEEEEEEEESSCHHHHHHHHHCTTTGGGTSCBTTBCEEEEEECCSTTCEEEEEEECGGG----CEEEEEEEE--EE
T ss_pred CCCCceEEEEEEECCCHHHHHHHhcCHHHHhhEeCCCCeeeEEEEEeccCCCEEEEEEECCCC----CEEEEEEEE--EE
Confidence 456678999999999999999999999999999863 12233333456666543223222 222222222 22
Q ss_pred cccccCCCCCceEEEEEeec-CCC--CceeeeEEEEEcCCCeeEEEecc
Q 025783 191 KDLEIFPSGKKRDIEFKMIE-GDF--QLFEGKWSIEQVTYSCLQIIQNN 236 (248)
Q Consensus 191 ~d~e~~P~g~~rrI~f~lVe-GDF--K~feG~W~fep~~~Gt~~vl~~~ 236 (248)
..| +++|.|+..- ++. ..-.-.|.|++.++||+..++-.
T Consensus 83 ----~~p---~~rl~~t~~~~~~~~~~~s~vt~~l~~~~~gT~l~l~~~ 124 (164)
T 3pu2_A 83 ----AEP---PHRLIHSELYDEDWTGGETLVTLQLLPVEGGTELAMAVD 124 (164)
T ss_dssp ----EET---TTEEEEEEBCC---CCSCEEEEEEEEEETTEEEEEEEEE
T ss_pred ----EcC---CCEEEEEEeccCCCCCCCEEEEEEEEEcCCCEEEEEEEE
Confidence 223 4789888752 211 23677899999999999988776
No 39
>2vq5_A S-norcoclaurine synthase; lyase, S- norcoclaurine biosynthesis, dopamine, hydroxybenzaldehyde; HET: MSE LDP HBA; 2.09A {Thalictrum flavum} PDB: 2vne_A*
Probab=98.14 E-value=1.7e-05 Score=68.82 Aligned_cols=107 Identities=16% Similarity=0.235 Sum_probs=72.9
Q ss_pred EEEEEEEEEcCCHHHHHHH-Hh-Chhhh-ccccCCc-ceeEEEEecC--CEEEEEEEeecceeeceEEEEeEEEEeeccc
Q 025783 119 RRIRSKIEIDASLDTVWHI-LT-DYEKL-ADFVPNL-AVSQVVEKND--NFVRLYQIGQQNLAFGIKFNAKGVLDCYEKD 192 (248)
Q Consensus 119 r~V~asi~V~ap~e~Vw~v-LT-DYEry-PeFIP~~-~~SrVLer~g--~~vrv~QVG~~~i~fg~~FtarvvLdvtE~d 192 (248)
..+..++.|++|+++||++ +. |+.++ |+++|.+ ++++++ .+| +.+|....+...- ..+ .+=++ ..
T Consensus 29 g~~~~eveI~apa~kvW~~~v~~df~~l~pk~~P~~i~s~e~~-GdGg~GsIR~lt~~~G~~---~~~-vkErl--e~-- 99 (201)
T 2vq5_A 29 KVIHHELEVAASADDIWTVYSWPGLAKHLPDLLPGAFEKLEII-GDGGVGTILDMTFVPGEF---PHE-YKEKF--IL-- 99 (201)
T ss_dssp EEEEEEEEESSCHHHHHHHHTCGGGGGGHHHHSTTSCSEEEEE-SSSSTTCEEEEECCTTCS---SCE-EEEEE--EE--
T ss_pred eEEEEEEEecCCHHHHHhhhhcCCcccchhhhCcccceEEEEe-cCCCCCeEEEEEecCCCc---ccE-EEEEE--EE--
Confidence 4688889999999999999 56 99999 9999976 666888 654 2355433322110 011 11112 11
Q ss_pred cccCCCCCceEEEEEeecCC-----CCceeeeEEEEEcCC-CeeEEEeccce
Q 025783 193 LEIFPSGKKRDIEFKMIEGD-----FQLFEGKWSIEQVTY-SCLQIIQNNIF 238 (248)
Q Consensus 193 ~e~~P~g~~rrI~f~lVeGD-----FK~feG~W~fep~~~-Gt~~vl~~~~~ 238 (248)
..+ +++.+.|++++|| ++.|....++.+.++ |+.+..+-.+.
T Consensus 100 --iDd--e~~~~sYsiieGd~l~~~~~~y~~tikv~p~~dggs~vkWt~~ye 147 (201)
T 2vq5_A 100 --VDN--EHRLKKVQMIEGGYLDLGVTYYMDTIHVVPTGKDSCVIKSSTEYH 147 (201)
T ss_dssp --EET--TTTEEEEEEEEEGGGGTTEEEEEEEEEEEEEETTEEEEEEEEEEE
T ss_pred --Ech--hhCEEEEEEEecCccccceeEEEEEEEEEECCCCCeEEEEEEEEE
Confidence 111 3689999999996 678999999999875 56666665554
No 40
>1xfs_A NC_840354, conserved hypothetical protein; structural genomics, protein structure initiative, NESG, ALP protein, PSI; 1.70A {Nitrosomonas europaea} SCOP: d.129.3.5
Probab=98.13 E-value=5.3e-05 Score=61.84 Aligned_cols=108 Identities=12% Similarity=0.087 Sum_probs=68.8
Q ss_pred CCcEEEEEEEEEcCCHHHHHHHHhChhhhccccCC--cc--eeEEEEecCCEEEEEEEeecceeeceEEEEeEEEEeecc
Q 025783 116 RNSRRIRSKIEIDASLDTVWHILTDYEKLADFVPN--LA--VSQVVEKNDNFVRLYQIGQQNLAFGIKFNAKGVLDCYEK 191 (248)
Q Consensus 116 ~~~r~V~asi~V~ap~e~Vw~vLTDYEryPeFIP~--~~--~SrVLer~g~~vrv~QVG~~~i~fg~~FtarvvLdvtE~ 191 (248)
.+.+.+..++.|+||+++||++|||-++|++|++. +. .+++-.+.|+..+....+..+ ..+....+ +.+
T Consensus 7 ~~~~~i~~~r~i~Ap~e~Vw~altdp~~~~~W~~p~~~~~~~~~~d~~~Gg~~~~~~~~~~G----~~~~~~~~--v~e- 79 (178)
T 1xfs_A 7 DAELDLMLKRELAVPVNLVWRGLTEPELLKKWFVPKPWSISDCRVDLRPGGEFYTVMQDPEG----NKFPNSGC--FLE- 79 (178)
T ss_dssp CTTTEEEEEEEESSCHHHHHHHHHCHHHHTTTSSCTTCEEEEEEECCSTTCEEEEEEECTTC----CEEEEEEE--EEE-
T ss_pred CCCceEEEEEEecCCHHHHHHHhCCHHHHhhCCCCCCeeeeEEEEeeECCcEEEEEEECCCC----CEEEEEEE--EEE-
Confidence 34568888999999999999999999999999753 21 222323456665543222111 22222221 222
Q ss_pred ccccCCCCCceEEEEEeecC----CCC------------ceeeeEEEEEcCCCeeEEEecc
Q 025783 192 DLEIFPSGKKRDIEFKMIEG----DFQ------------LFEGKWSIEQVTYSCLQIIQNN 236 (248)
Q Consensus 192 d~e~~P~g~~rrI~f~lVeG----DFK------------~feG~W~fep~~~Gt~~vl~~~ 236 (248)
..| +++|.|+..-+ +.. .....|.|++.++||+..++-.
T Consensus 80 ---~~p---~~rl~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~l~~~~~gT~l~~~~~ 134 (178)
T 1xfs_A 80 ---VTD---EKRLIWTSALVKNYRPAVPATTSDKECAHIVMTAVIELQPTSSGTRYTACAM 134 (178)
T ss_dssp ---EET---TTEEEEESSEEGGGEECCC-----------CCEEEEEEEECSSSEEEEEEEE
T ss_pred ---EeC---CCEEEEEEEEcCCCCccccccccccccccccEEEEEEEEECCCCEEEEEEEE
Confidence 123 37898887521 221 4678899999999999888765
No 41
>2lf2_A Uncharacterized protein; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics consortium; NMR {Cytophaga hutchinsonii}
Probab=98.13 E-value=0.00011 Score=60.14 Aligned_cols=115 Identities=13% Similarity=0.034 Sum_probs=73.5
Q ss_pred EEEEEEcCCCcEEEEEEEEEcCCHHHHHHHHhChhhhccccCC----cceeEEEEecCCEEEEEEEeecceeeceEEEEe
Q 025783 108 CIEIKKLGRNSRRIRSKIEIDASLDTVWHILTDYEKLADFVPN----LAVSQVVEKNDNFVRLYQIGQQNLAFGIKFNAK 183 (248)
Q Consensus 108 ~V~v~~l~~~~r~V~asi~V~ap~e~Vw~vLTDYEryPeFIP~----~~~SrVLer~g~~vrv~QVG~~~i~fg~~Ftar 183 (248)
.+.+.. ..+.+.|..++.|+||+++||+++||-+.|++|.+. +...++--+.|+..+....+..+ ..+...
T Consensus 6 ~~~~~~-~~~~~~i~~~~~i~Ap~e~Vw~a~tdpe~~~~W~~p~~~~~~~~~~d~~~Gg~~~~~~~~~~G----~~~~~~ 80 (175)
T 2lf2_A 6 ALDFSV-NKENKTITIKREFAAVRAIVWEAFTRAEILDQWWAPKPWKAKTKSMDFKEGGTWLYAMVGPNG----EEHWSI 80 (175)
T ss_dssp EEEEEE-ETTTTEEEEEEEESSCHHHHHHHHTCHHHHHHSSSSSSSEEEEEEECCSTTCEEEEEEECSSS----CEEEEE
T ss_pred ceeEee-cCCCceEEEEEEEcCCHHHHHHHhCCHHHHhhCcCCCCccceEEEEeccCCCEEEEEEECCCC----CEEEeE
Confidence 334433 345568999999999999999999999999999642 12233333456666543222222 222222
Q ss_pred EEEEeeccccccCCCCCceEEEEEeec----C----CCCceeeeEEEEEcCCCeeEEEecc
Q 025783 184 GVLDCYEKDLEIFPSGKKRDIEFKMIE----G----DFQLFEGKWSIEQVTYSCLQIIQNN 236 (248)
Q Consensus 184 vvLdvtE~d~e~~P~g~~rrI~f~lVe----G----DFK~feG~W~fep~~~Gt~~vl~~~ 236 (248)
. .+.+ ..| +++|.|+-.- | ++....-.|.|++.++||+..++-.
T Consensus 81 g--~v~e----~~p---~~rl~~t~~~~~~~g~p~~~~~~~~v~~~l~~~~~gT~l~~~~~ 132 (175)
T 2lf2_A 81 C--EYAI----IKP---IERFTGKDGFTDASGKLNTEMPRSNWDMRFIDKGEITEVQYHIS 132 (175)
T ss_dssp E--EECC----CCS---SSEEEEEEEEESSTTCCCTTSCCEEEEEEEEEETTEEEEEEEEE
T ss_pred E--EEEE----EcC---CCEEEEEEEecCCCCCcCCCCCcEEEEEEEEECCCCEEEEEEEe
Confidence 2 2233 234 4788888653 2 2235788999999999998888755
No 42
>2ldk_A Uncharacterized protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Arthrobacter aurescens}
Probab=98.13 E-value=7.6e-05 Score=60.40 Aligned_cols=107 Identities=16% Similarity=0.128 Sum_probs=69.5
Q ss_pred CcEEEEEEEEEcCCHHHHHHHHhChhhhccccCC----cceeEEEEecCCEEEEEEEeecceeeceEEEEeEEEEeeccc
Q 025783 117 NSRRIRSKIEIDASLDTVWHILTDYEKLADFVPN----LAVSQVVEKNDNFVRLYQIGQQNLAFGIKFNAKGVLDCYEKD 192 (248)
Q Consensus 117 ~~r~V~asi~V~ap~e~Vw~vLTDYEryPeFIP~----~~~SrVLer~g~~vrv~QVG~~~i~fg~~FtarvvLdvtE~d 192 (248)
+.+.|..++.|+||+++||+++||-+++++|.+. +..++.-.+.|+..+....+..+ ..+.... .+.+
T Consensus 10 ~~~~i~~~~~i~Ap~e~Vw~altdp~~~~~W~~p~~~~~~~~~~d~~~Gg~~~~~~~~~~g----~~~~~~~--~v~e-- 81 (172)
T 2ldk_A 10 EALSFSIVAEFDADVKRVWAIWEDPRQLERWWGPPTWPATFETHEFTVGGKAAYYMTGPDG----TKARGWW--QFTT-- 81 (172)
T ss_dssp TTTEEEEEEEESSCHHHHHHHHHCHHHHHTTSSCTTSCEEEEEECCSTTCEEEEEEECTTS----CEEEEEE--EEEE--
T ss_pred CCceEEEEEEeCCCHHHHHHHhCCHHHHHhccCCCCcccceEEEeecCCCEEEEEEECCCC----CEEeeEE--EEEE--
Confidence 4568999999999999999999999999999642 12233333456665543222111 1111121 2222
Q ss_pred cccCCCCCceEEEEEeecCC--------CCceeeeEEEEEcCCCeeEEEecc
Q 025783 193 LEIFPSGKKRDIEFKMIEGD--------FQLFEGKWSIEQVTYSCLQIIQNN 236 (248)
Q Consensus 193 ~e~~P~g~~rrI~f~lVeGD--------FK~feG~W~fep~~~Gt~~vl~~~ 236 (248)
..| +++|.|+...++ +....-.|.|++.++||+..++-.
T Consensus 82 --~~p---~~rl~~~~~~~~~~g~p~~~~~~~~v~~~l~~~~~gT~lt~~~~ 128 (172)
T 2ldk_A 82 --IEA---PDHLEFDDGFADEHGAPVDELGVTHATVKLEPLENRTRMTIIST 128 (172)
T ss_dssp --ECS---SSEEEEEEEEBCSSCCBCTTTCEEEEEEEEEEETTEEEEEEEEE
T ss_pred --EcC---CCEEEEEEeecCCCCCccCCCccEEEEEEEEEcCCCEEEEEEEE
Confidence 223 478888875421 235778899999999999888765
No 43
>3qrz_A Abscisic acid receptor PYL5; crystal, hormone receptor; 2.60A {Arabidopsis thaliana}
Probab=98.11 E-value=2.1e-07 Score=82.18 Aligned_cols=110 Identities=15% Similarity=0.242 Sum_probs=66.5
Q ss_pred EEEEEEEEcCCHHHHHHHHhChhhhccccCCcceeEEEEecC---CEEEEEEEeecceeeceEEEEeEEEEeeccccccC
Q 025783 120 RIRSKIEIDASLDTVWHILTDYEKLADFVPNLAVSQVVEKND---NFVRLYQIGQQNLAFGIKFNAKGVLDCYEKDLEIF 196 (248)
Q Consensus 120 ~V~asi~V~ap~e~Vw~vLTDYEryPeFIP~~~~SrVLer~g---~~vrv~QVG~~~i~fg~~FtarvvLdvtE~d~e~~ 196 (248)
....+..|+||+++||+++.|+++++.+.|.++.+++++.++ +.+|....+. |..+ . .+.|+ ++.+
T Consensus 79 ~~~v~~~I~ApadkVW~lv~Df~~pk~w~p~I~s~el~eGdg~gvGSVR~lt~~~-----G~p~--~---~vkEr-Le~i 147 (223)
T 3qrz_A 79 CSSVVQMIHAPPESVWALVRRFDNPKVYKNFIRQCRIVQGDGLHVGDLREVMVVS-----GLPA--V---SSTER-LEIL 147 (223)
T ss_dssp EECCCCCCSSCHHHHHHHHHCCSSGGGTCSSCCCCCCCC---CCSSCCCCCCC--------CCC--C---CCCCC-CSEE
T ss_pred EEEEEEEEcCCHHHHHHHHhCCCChhHcchhcCEEEEEcCCCCCCCeEEEEEecC-----CCcc--c---eEEEE-EEEE
Confidence 444455899999999999999999989999999999986654 2233221111 1000 0 01221 1112
Q ss_pred CCCCceEEEEEeecCC--CCceeeeEEEEEcCC-CeeEEEeccceecc
Q 025783 197 PSGKKRDIEFKMIEGD--FQLFEGKWSIEQVTY-SCLQIIQNNIFVKL 241 (248)
Q Consensus 197 P~g~~rrI~f~lVeGD--FK~feG~W~fep~~~-Gt~~vl~~~~~~~~ 241 (248)
.+ +++.+.|++++|+ ++.|++.++|++.++ ||.++..-.+..|+
T Consensus 148 Dd-e~~~~sYsIieG~~p~~~Y~stikV~p~~dGGT~V~Ws~~f~pp~ 194 (223)
T 3qrz_A 148 DE-ERHVISFSVVGGDHRLKNYRSVTTLHASDDEGTVVVESYIVDVPP 194 (223)
T ss_dssp ET-TTTEEECCCTTCSSSCCCCCCEEEC--------CCEEEEEECSCS
T ss_pred ec-cCCEEEEEEEeCCCccccEEEEEEEEEcCCCCEEEEEEEEEEcCC
Confidence 21 3578999999998 699999999999855 67776666555443
No 44
>3q6a_A Uncharacterized protein; structural genomics, PSI-biology; 1.80A {Staphylococcus saprophyticus subsp}
Probab=98.11 E-value=9.1e-06 Score=63.41 Aligned_cols=96 Identities=17% Similarity=0.162 Sum_probs=64.0
Q ss_pred EEEEEEEEcCCHHHHHHHHhChhhhccccCCcceeEEEEecCCEEEEEEEeecceeeceEEEEeEEEEeeccccccCCCC
Q 025783 120 RIRSKIEIDASLDTVWHILTDYEKLADFVPNLAVSQVVEKNDNFVRLYQIGQQNLAFGIKFNAKGVLDCYEKDLEIFPSG 199 (248)
Q Consensus 120 ~V~asi~V~ap~e~Vw~vLTDYEryPeFIP~~~~SrVLer~g~~vrv~QVG~~~i~fg~~FtarvvLdvtE~d~e~~P~g 199 (248)
+|..++.|+||+++||+++||-++|++|.+. .+..--+.|+..+.. .+ .. +.....+ +.+ ..|
T Consensus 2 ~i~~~~~i~ap~e~Vw~altd~~~~~~W~~~--~~~~~~~~Gg~~~~~-~~--~~--~~~~~~~----v~~----~~p-- 64 (135)
T 3q6a_A 2 DIITKMQVDVPRETVFEAFVDPEKIGGFWFS--SSSERWEQGKTITLR-YE--EY--DAELNIN----IER----VED-- 64 (135)
T ss_dssp CEEEEEEESSCHHHHHHHHHCTTTGGGTSSS--EESSCCCTTCEEEEE-CG--GG--TC-CEEE----EEE----EET--
T ss_pred eEEEEEEeCCCHHHHHHHHcCHHHhcccCCC--CCcccccCCCEEEEE-Ec--Cc--CceEEEE----EEE----EcC--
Confidence 4788999999999999999999999999653 222222345555432 11 11 1111111 222 223
Q ss_pred CceEEEEEeecCCCCceeeeEEEEEcCCCeeEEEeccce
Q 025783 200 KKRDIEFKMIEGDFQLFEGKWSIEQVTYSCLQIIQNNIF 238 (248)
Q Consensus 200 ~~rrI~f~lVeGDFK~feG~W~fep~~~Gt~~vl~~~~~ 238 (248)
+++|.|+...| ...|.|++.++||+..++-..|
T Consensus 65 -~~~l~~~~~~g-----~~~~~l~~~~~gT~l~~~~~~~ 97 (135)
T 3q6a_A 65 -NQLIAFTWGAH-----PITIQFEESEAGTVVTTTEKDF 97 (135)
T ss_dssp -TTEEEEEETTE-----EEEEEEEEETTEEEEEEEECCC
T ss_pred -CCEEEEEEcCC-----eEEEEEEECCCCEEEEEEEcCC
Confidence 47899988764 7899999999999998886544
No 45
>2nn5_A Hypothetical protein EF_2215; structural genomics, APC29336, PSI-2, structure initiative; HET: MSE; 1.45A {Enterococcus faecalis} SCOP: d.129.3.5
Probab=98.10 E-value=2.9e-05 Score=65.10 Aligned_cols=98 Identities=14% Similarity=0.198 Sum_probs=66.9
Q ss_pred EEEcCCCcEEEEEEEEEcCCHHHHHHHHhChhhhccccCCcceeEEEEecCCEEEEEEEeecceeeceEEEEeEEEEeec
Q 025783 111 IKKLGRNSRRIRSKIEIDASLDTVWHILTDYEKLADFVPNLAVSQVVEKNDNFVRLYQIGQQNLAFGIKFNAKGVLDCYE 190 (248)
Q Consensus 111 v~~l~~~~r~V~asi~V~ap~e~Vw~vLTDYEryPeFIP~~~~SrVLer~g~~vrv~QVG~~~i~fg~~FtarvvLdvtE 190 (248)
+.+..++ ..|..++.|+||+++||++|||-+.|++|.|.+... -.+.|+..+....+ . +. . ..+.+
T Consensus 29 ~~~~~~~-~~i~~~~~i~Ap~e~VW~altdp~~l~~W~~~~~~~--d~~~Gg~~~~~~~~---~--~~--~----~~v~e 94 (184)
T 2nn5_A 29 FRLENQT-IYFGTERAISASPQTIWRYLTETDKLKQWFPELEIG--ELGVNGFWRFILPD---F--EE--T----MPFTD 94 (184)
T ss_dssp EEEETTE-EEEEEEEEESSCHHHHHHHHHCHHHHHHHCTTEEEE--ECSTTCEEEEEETT---E--EE--E----EEEEE
T ss_pred hhcCCCC-cEEEEEEEeCCCHHHHHHHHcCHHHHHHhCCCcccc--ccCCCCEEEEEEeC---C--Cc--e----EEEEE
Confidence 3443433 789999999999999999999999999999865432 23456665532111 1 11 1 12222
Q ss_pred cccccCCCCCceEEEEEeecCCCCceeeeEEEEE-cCCCeeEEEe
Q 025783 191 KDLEIFPSGKKRDIEFKMIEGDFQLFEGKWSIEQ-VTYSCLQIIQ 234 (248)
Q Consensus 191 ~d~e~~P~g~~rrI~f~lVeGDFK~feG~W~fep-~~~Gt~~vl~ 234 (248)
..| +++|.|+.. | ..-.|.|++ .++||+..++
T Consensus 95 ----~~p---~~rl~~~~~-~----~~v~~~l~~~~~~gT~l~~~ 127 (184)
T 2nn5_A 95 ----YAE---EKYLGVTWD-T----GIIYFDLKEQAPHQTLLVFS 127 (184)
T ss_dssp ----EET---TTEEEEEET-T----EEEEEEEEEEETTEEEEEEE
T ss_pred ----ecC---CCEEEEEEc-C----eEEEEEEEECCCCCEEEEEE
Confidence 223 378888873 2 677899999 8899998888
No 46
>3oji_A Abscisic acid receptor PYL3; crystal, PP2C, pyrabactin, HOR receptor; HET: PYV; 1.84A {Arabidopsis thaliana} PDB: 4ds8_A* 3klx_A* 4dsb_A* 4dsc_A*
Probab=98.09 E-value=2.2e-05 Score=67.80 Aligned_cols=92 Identities=14% Similarity=0.274 Sum_probs=64.5
Q ss_pred EEEEEcCCHHHHHHHHhChhhhccccCCcceeEEEE-ecC------CEEEEEEEeecceeeceEEEEeEEEEeecccccc
Q 025783 123 SKIEIDASLDTVWHILTDYEKLADFVPNLAVSQVVE-KND------NFVRLYQIGQQNLAFGIKFNAKGVLDCYEKDLEI 195 (248)
Q Consensus 123 asi~V~ap~e~Vw~vLTDYEryPeFIP~~~~SrVLe-r~g------~~vrv~QVG~~~i~fg~~FtarvvLdvtE~d~e~ 195 (248)
....|+||+++||++|.|+++++.|.|.++++++.+ .++ +.+|...++. +..++. . +-++..
T Consensus 34 ~~~~I~Ap~d~VWalVrdF~~p~~w~p~V~s~~~~e~Gdg~~~~~vGsVR~ltl~~-G~P~~~---i--~ErL~~----- 102 (189)
T 3oji_A 34 IAHRVDAPAHAIWRFVRDFANPNKYKHFIKSCTIRVNGNGIKEIKVGTIREVSVVS-GLPAST---S--VEILEV----- 102 (189)
T ss_dssp EEEEESSCHHHHHHHHSCTTCGGGTCTTEEEEEECCC----CCCSTTCEEEEEECS-SSSBSE---E--EEEEEE-----
T ss_pred EEEEEcCCHHHHHHHHhCCCChhhCccccceEEEEecCCCCccCCCCcEEEEEecC-CCcCce---E--EEEEEE-----
Confidence 456889999999999999999999999999999885 432 4566544432 110111 1 111222
Q ss_pred CCCCCceEEEEEeecCC--CCceeeeEEEEEcC
Q 025783 196 FPSGKKRDIEFKMIEGD--FQLFEGKWSIEQVT 226 (248)
Q Consensus 196 ~P~g~~rrI~f~lVeGD--FK~feG~W~fep~~ 226 (248)
+.+ +++.+.|++++|+ ++.|...-++.+.+
T Consensus 103 lDd-e~~~~sY~Iieg~~pv~nY~StitV~~~~ 134 (189)
T 3oji_A 103 LDE-EKRILSFRVLGGEHRLNNYRSVTSVNEFV 134 (189)
T ss_dssp EET-TTTEEEEEEEECSBSSCSCEEEEEEEEEE
T ss_pred Eec-cCCEEEEEEEecCCccccEEEEEEEEecc
Confidence 111 3689999999998 89999999999964
No 47
>3rd6_A MLL3558 protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 2.80A {Mesorhizobium loti}
Probab=98.08 E-value=5.6e-05 Score=61.08 Aligned_cols=107 Identities=9% Similarity=-0.029 Sum_probs=68.8
Q ss_pred EEEEEEEEEcCCHHHHHHHHhChhhhccccCCc---c--eeEEEEecCCEEEEEEEeecceeeceEEEEeEEEEeecccc
Q 025783 119 RRIRSKIEIDASLDTVWHILTDYEKLADFVPNL---A--VSQVVEKNDNFVRLYQIGQQNLAFGIKFNAKGVLDCYEKDL 193 (248)
Q Consensus 119 r~V~asi~V~ap~e~Vw~vLTDYEryPeFIP~~---~--~SrVLer~g~~vrv~QVG~~~i~fg~~FtarvvLdvtE~d~ 193 (248)
..+..++.|+||+++||+++||-+.+++|.+.- . .+++--+.|+..+....+..+- ...+..+ ++++
T Consensus 8 ~~i~~~r~i~Ap~e~Vw~altdp~~~~~W~~~~~~~~~~~~~~d~~~Gg~~~~~~~~~~G~--~~~~~g~-v~e~----- 79 (161)
T 3rd6_A 8 STFTIERTYPQSPDRVFHAFADKATVRRWRVDGDGFTVAEFSFDFRVGGGEVSRFSYGGGP--EVRLDAQ-FQDI----- 79 (161)
T ss_dssp EEEEEEEEESSCHHHHHHHHHCHHHHHHHTCCCCC---CEEEECCSTTCEEEEEECSTTSC--CEEEEEE-EEEE-----
T ss_pred ceEEEEEEECCCHHHHHHHhcCHHHHhhccCCCCCceeeEEEEccCcCCEEEEEEECCCCC--EEEEEEE-EEEE-----
Confidence 568888899999999999999999999999532 1 2233334566665422111111 1222222 2222
Q ss_pred ccCCCCCceEEEEEee---cCC-CCceeeeEEEEEcCCCeeEEEeccce
Q 025783 194 EIFPSGKKRDIEFKMI---EGD-FQLFEGKWSIEQVTYSCLQIIQNNIF 238 (248)
Q Consensus 194 e~~P~g~~rrI~f~lV---eGD-FK~feG~W~fep~~~Gt~~vl~~~~~ 238 (248)
.| +++|.|+.. +|+ .....-.|.|++.++||+..++-..+
T Consensus 80 --~p---~~rl~~~~~~~~~~~~~~~s~v~~~l~~~~~gT~lt~~~~~~ 123 (161)
T 3rd6_A 80 --VP---DQRIVFSYRMAIGPQPMSASLTTVELTPSGDGTRLTYTEQGA 123 (161)
T ss_dssp --ET---TTEEEEEEEEEETTEEEEEEEEEEEEEEETTEEEEEEEEEEE
T ss_pred --cC---CCEEEEEEEecCCCCCCCceEEEEEEEECCCCEEEEEEEEec
Confidence 23 378888875 342 44566789999999999998887654
No 48
>3q64_A MLL3774 protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.50A {Mesorhizobium loti}
Probab=98.06 E-value=5.5e-05 Score=61.22 Aligned_cols=108 Identities=6% Similarity=-0.071 Sum_probs=70.3
Q ss_pred cEEEEEEEEEcCCHHHHHHHHhChhhhccccCCc-----ceeEEEEecCCEEEEEEEeecceeeceEEEEeEEEEeeccc
Q 025783 118 SRRIRSKIEIDASLDTVWHILTDYEKLADFVPNL-----AVSQVVEKNDNFVRLYQIGQQNLAFGIKFNAKGVLDCYEKD 192 (248)
Q Consensus 118 ~r~V~asi~V~ap~e~Vw~vLTDYEryPeFIP~~-----~~SrVLer~g~~vrv~QVG~~~i~fg~~FtarvvLdvtE~d 192 (248)
...+..++.|+||+++||+++||-+.+++|.+.. ..+++--+.|+..+....+..+- ...+..+ ++++
T Consensus 8 ~~~i~~~r~i~Ap~e~Vw~altdp~~~~~W~~~~~g~~~~~~~~d~~~Gg~~~~~~~~~~G~--~~~~~g~-v~e~---- 80 (162)
T 3q64_A 8 HSTFIIERLYPAPPSKVFFALGNADAKRRWFTDPDNPMPGRFEMDFRVGGKEVNAGGPKDGP--IHVYTAT-YQDI---- 80 (162)
T ss_dssp EEEEEEEEEESSCHHHHHHHHHCHHHHHHHSSCTTSCCGGGCEECCSTTCEEEEEECCTTSC--CEEEEEE-EEEE----
T ss_pred cceEEEEEEeCCCHHHHHHHHCCHHHHhhcCCCCCCccceEEEECCccCCEEEEEEECCCCC--EEEEEEE-EEEE----
Confidence 3578889999999999999999999999998543 22343345666665432111111 1222222 2222
Q ss_pred cccCCCCCceEEEEEee---cCC-CCceeeeEEEEEcCCCeeEEEeccce
Q 025783 193 LEIFPSGKKRDIEFKMI---EGD-FQLFEGKWSIEQVTYSCLQIIQNNIF 238 (248)
Q Consensus 193 ~e~~P~g~~rrI~f~lV---eGD-FK~feG~W~fep~~~Gt~~vl~~~~~ 238 (248)
.| +++|.|+.. +|+ .....-.|.|++.++||+..++-..+
T Consensus 81 ---~p---~~rl~~~~~~~~~~~~~~~s~v~~~l~~~~~gT~lt~~~~~~ 124 (162)
T 3q64_A 81 ---VP---DQRIVYSYDMLFGETRISVSLATIQLFAEGEGTRLVLTEQGA 124 (162)
T ss_dssp ---ET---TTEEEEEEEEEETTEEEEEEEEEEEEEEETTEEEEEEEEEEE
T ss_pred ---cC---CCEEEEEEEecCCCCCCCceEEEEEEEEcCCCEEEEEEEEec
Confidence 23 378888876 342 34456789999999999998886654
No 49
>3put_A Hypothetical conserved protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium; 1.83A {Rhizobium etli cfn 42} PDB: 3otl_A*
Probab=98.04 E-value=9.4e-05 Score=60.40 Aligned_cols=108 Identities=9% Similarity=0.087 Sum_probs=70.9
Q ss_pred cEEEEEEEEEcCCHHHHHHHHhChhhhccccC-C----cceeEEEEecCCEEEEEEEeecceeeceEEEEeEEEEeeccc
Q 025783 118 SRRIRSKIEIDASLDTVWHILTDYEKLADFVP-N----LAVSQVVEKNDNFVRLYQIGQQNLAFGIKFNAKGVLDCYEKD 192 (248)
Q Consensus 118 ~r~V~asi~V~ap~e~Vw~vLTDYEryPeFIP-~----~~~SrVLer~g~~vrv~QVG~~~i~fg~~FtarvvLdvtE~d 192 (248)
...+..++.|+||+++||+++||-+.+++|.+ . +..+++--+.|+..+....+..+- ...+..+ ++++
T Consensus 8 ~~~i~~~r~i~Ap~e~Vw~a~Tdpe~l~~W~~~~~~~~~~~~~~d~~~GG~~~~~~~~~~G~--~~~~~g~-v~ev---- 80 (166)
T 3put_A 8 HTTFVIERRLTAPVARVFRAWSTPESKRQWFACHGEWVPLEYALDFRPGGTERNYTADTDGL--LHAYDAR-YIDI---- 80 (166)
T ss_dssp EEEEEEEEEESSCHHHHHHHHHCHHHHHHHHTCC---CCSEEEECCSTTCEEEEEEECTTSC--EEEEEEE-EEEE----
T ss_pred cceEEEEEEECCCHHHHHHHhCCHHHHHhcCCCCCCceeeEEEeCcccCCEEEEEEECCCCC--EEEEEEE-EEEE----
Confidence 35788999999999999999999999999974 3 233344345667665432221121 0122222 2222
Q ss_pred cccCCCCCceEEEEEee---cCC-CCceeeeEEEEEcCCCeeEEEeccce
Q 025783 193 LEIFPSGKKRDIEFKMI---EGD-FQLFEGKWSIEQVTYSCLQIIQNNIF 238 (248)
Q Consensus 193 ~e~~P~g~~rrI~f~lV---eGD-FK~feG~W~fep~~~Gt~~vl~~~~~ 238 (248)
.| +++|.|+.. +|. +....-.|.|++.++||+..++-..+
T Consensus 81 ---~p---~~rlv~t~~~~~~~~~~~~s~vt~~l~~~~~gT~ltl~~~~~ 124 (166)
T 3put_A 81 ---VP---DTRIIYAYEMKLGQTRISASLVTVAFDVEPSGTRMVFTEQVV 124 (166)
T ss_dssp ---ET---TTEEEEEEEEEETTEEEEEEEEEEEEEECSSSEEEEEEEEEE
T ss_pred ---cC---CcEEEEEEEecCCCCCCCceEEEEEEEECCCCEEEEEEEEec
Confidence 23 378888775 232 44567789999999999998886655
No 50
>1xn6_A Hypothetical protein BC4709; structural genomics, protein structure initiative, PSI, NESG target protein BCR68, alpha + beta; NMR {Bacillus cereus} SCOP: d.129.3.5
Probab=98.04 E-value=5e-06 Score=65.26 Aligned_cols=98 Identities=14% Similarity=0.151 Sum_probs=66.6
Q ss_pred cEEEEEEEEEcCCHHHHHHHHhChhhhccccCCcceeEEEEecCCEEEEEEEeecceeeceEEEEeEEEEeeccccccCC
Q 025783 118 SRRIRSKIEIDASLDTVWHILTDYEKLADFVPNLAVSQVVEKNDNFVRLYQIGQQNLAFGIKFNAKGVLDCYEKDLEIFP 197 (248)
Q Consensus 118 ~r~V~asi~V~ap~e~Vw~vLTDYEryPeFIP~~~~SrVLer~g~~vrv~QVG~~~i~fg~~FtarvvLdvtE~d~e~~P 197 (248)
...|..++.|+||+++||++|||.++|++|.|.+. +-.+.|+..+.. .. . |. +..+ +.+ ..|
T Consensus 7 ~~~i~~~~~i~ap~e~Vw~~ltd~~~~~~W~~~~~---~~~~~G~~~~~~-~~-~----g~-~~~~----v~e----~~p 68 (143)
T 1xn6_A 7 LNDIKQTIVFNASIQKVWSVVSTAEGIASWFMPND---FVLEVGHEFHVQ-SP-F----GP-SPCK----VLE----IDE 68 (143)
T ss_dssp CCCEEEEEEESSCHHHHHHTTSCSHHHHTTSCCBC---CCCCTTCEECBC-CT-T----CC-CCEE----EEE----EET
T ss_pred CCEEEEEEEEcCCHHHHHHHHhCHhHHHHhcCCCC---cCcCCCCEEEEE-Ec-C----CC-ceEE----EEE----EeC
Confidence 35789999999999999999999999999999832 222345544321 11 1 11 2222 222 123
Q ss_pred CCCceEEEEEeecCCCCceeeeEEEEEcCC-CeeEEEecccee
Q 025783 198 SGKKRDIEFKMIEGDFQLFEGKWSIEQVTY-SCLQIIQNNIFV 239 (248)
Q Consensus 198 ~g~~rrI~f~lVeGDFK~feG~W~fep~~~-Gt~~vl~~~~~~ 239 (248)
+++|.|+...+ .....|.|++.++ ||+..++-..|-
T Consensus 69 ---~~~l~~~~~~~---~~~~~~~l~~~~~g~T~l~~~~~~~~ 105 (143)
T 1xn6_A 69 ---PNHLSFSWDTD---GWVVSFDLKDLGDNKTEFTLIHGGWK 105 (143)
T ss_dssp ---TTEEEEEETTT---TEEEEEEEEEEETTEEEEEEEEECCC
T ss_pred ---CCEEEEEEeCC---CEEEEEEEEECCCCcEEEEEEEEccC
Confidence 37899988665 5678999999998 898887655443
No 51
>3q63_A MLL2253 protein; structural genomics, PSI-biology, protein structure initiati alpha-beta protein, unknown, structure genomics; 2.00A {Mesorhizobium loti}
Probab=98.04 E-value=5.4e-05 Score=60.67 Aligned_cols=103 Identities=9% Similarity=0.134 Sum_probs=68.7
Q ss_pred CcEEEEEEEEEcCCHHHHHHHHhChhhhccccCCcceeEEEEecCCEEEEEEEeecceeeceEEEEeEEEEeeccccccC
Q 025783 117 NSRRIRSKIEIDASLDTVWHILTDYEKLADFVPNLAVSQVVEKNDNFVRLYQIGQQNLAFGIKFNAKGVLDCYEKDLEIF 196 (248)
Q Consensus 117 ~~r~V~asi~V~ap~e~Vw~vLTDYEryPeFIP~~~~SrVLer~g~~vrv~QVG~~~i~fg~~FtarvvLdvtE~d~e~~ 196 (248)
..+.|..++.|+||+++||+++||-+++++|.+. +.+-.+.|+..+.. +.. +..+..++ +++ .
T Consensus 7 ~~~~i~~~~~i~Ap~e~Vw~altdp~~~~~W~~~---~~~~~~~Gg~~~~~--~~~----g~~~~g~v-~e~-------~ 69 (151)
T 3q63_A 7 ENRTVVVERQISHPPEKLWRALTQPHLIEEWLMK---NDFKPAVGHRFNIS--ADW----GGVLDCEV-LAV-------E 69 (151)
T ss_dssp --CEEEEEEEESSCHHHHHHHHHCHHHHHHHSCE---ECCCSSTTCEEEEE--CTT----SCEEEEEE-EEE-------E
T ss_pred CCCeEEEEEEeCCCHHHHHHHHcCHHHHHhhcCc---CCCccCCCCEEEEE--CCC----CCEEEEEE-EEE-------e
Confidence 4468999999999999999999999999999984 22323455655432 321 22233332 222 2
Q ss_pred CCCCceEEEEEeecCC-----CCceeeeEEEEEcCCCeeEEEecccee
Q 025783 197 PSGKKRDIEFKMIEGD-----FQLFEGKWSIEQVTYSCLQIIQNNIFV 239 (248)
Q Consensus 197 P~g~~rrI~f~lVeGD-----FK~feG~W~fep~~~Gt~~vl~~~~~~ 239 (248)
| +++|.|+...++ -..-.-.|.|++.++||+..++-.-|-
T Consensus 70 p---~~~l~~~~~~~~~~~~~~~~s~v~~~l~~~~~gT~l~l~~~g~~ 114 (151)
T 3q63_A 70 P---NKTLSYTWNLAHQDPAFDLRSVVTFTLTPTPTGTHLRMEQSGFR 114 (151)
T ss_dssp T---TTEEEEECBBCCSSTTTCBCCEEEEEEEECSSSEEEEEEEECCC
T ss_pred C---CCEEEEEEecCCCCCCCCCCeEEEEEEEEcCCCEEEEEEEeCCC
Confidence 3 378999887432 233456789999999999988866553
No 52
>1xn5_A BH1534 unknown conserved protein; structural genomics, protein structure initiative, PSI, BACI halodurans protein BH1534, alpha + beta; NMR {Bacillus halodurans} SCOP: d.129.3.5
Probab=98.02 E-value=2.7e-05 Score=61.78 Aligned_cols=96 Identities=11% Similarity=0.214 Sum_probs=64.9
Q ss_pred EEEEEEEEEcCCHHHHHHHHhChhhhccccCCcceeEEEEecCCEEEEEEEeecceeeceEEEEeEEEEeeccccccCCC
Q 025783 119 RRIRSKIEIDASLDTVWHILTDYEKLADFVPNLAVSQVVEKNDNFVRLYQIGQQNLAFGIKFNAKGVLDCYEKDLEIFPS 198 (248)
Q Consensus 119 r~V~asi~V~ap~e~Vw~vLTDYEryPeFIP~~~~SrVLer~g~~vrv~QVG~~~i~fg~~FtarvvLdvtE~d~e~~P~ 198 (248)
..|..++.|+||+++||++|||.++|+++++.+ .+-.+.|+..+.. .. . | .+.. ++.+ ..|
T Consensus 5 ~~i~~~~~i~Ap~e~Vw~altd~~~~~~W~~~~---~~~~~~Gg~~~~~-~~---~--g-~~~~----~v~e----~~p- 65 (146)
T 1xn5_A 5 PDIKKEVRFNAPIEKVWEAVSTSEGLAFWFMEN---DLKAETGHHFHLQ-SP---F--G-PSPC----QVTD----VER- 65 (146)
T ss_dssp CCEEEEEEESSCHHHHHHHTTSHHHHHTTSCCB---CCCSCTTCEEEEE-CS---S--C-EEEE----EEEE----EET-
T ss_pred cEEEEEEEEcCCHHHHHHHHhChhHHHHhcCCC---CCCccCCCEEEEE-ec---C--C-ceEE----EEEE----EeC-
Confidence 468899999999999999999999999998863 1212344544332 11 0 1 1222 2222 123
Q ss_pred CCceEEEEEeecCCCCceeeeEEEEEcCCCeeEEEeccce
Q 025783 199 GKKRDIEFKMIEGDFQLFEGKWSIEQVTYSCLQIIQNNIF 238 (248)
Q Consensus 199 g~~rrI~f~lVeGDFK~feG~W~fep~~~Gt~~vl~~~~~ 238 (248)
+++|.|+... ......|.|++.++||++.++-.-|
T Consensus 66 --~~~l~~~~~~---~~~~~~~~l~~~~~gT~l~~~~~~~ 100 (146)
T 1xn5_A 66 --PIKLSFTWDT---DGWSVTFHLKEEENGTIFTIVHSGW 100 (146)
T ss_dssp --TTEEEEEETT---TTEEEEEEEEECSSSEEEEEEEECC
T ss_pred --CcEEEEEEeC---CCEEEEEEEEEcCCCEEEEEEEEEe
Confidence 3789888763 2357889999999999988875544
No 53
>2lak_A AHSA1-like protein RHE_CH02687; NESG, structural genomics, northeast structural genomics CON PSI-biology, structure genomics, unknown function; NMR {Rhizobium etli}
Probab=98.02 E-value=1.2e-05 Score=64.38 Aligned_cols=103 Identities=12% Similarity=0.075 Sum_probs=69.1
Q ss_pred CcEEEEEEEEEcCCHHHHHHHHhChhhhccccCCcceeEEEEecCCEEEEEEEeecceeeceEEEEeEEEEeeccccccC
Q 025783 117 NSRRIRSKIEIDASLDTVWHILTDYEKLADFVPNLAVSQVVEKNDNFVRLYQIGQQNLAFGIKFNAKGVLDCYEKDLEIF 196 (248)
Q Consensus 117 ~~r~V~asi~V~ap~e~Vw~vLTDYEryPeFIP~~~~SrVLer~g~~vrv~QVG~~~i~fg~~FtarvvLdvtE~d~e~~ 196 (248)
+...|..++.|+||+++||++|||-++|++|.+.+... -.+.|+..+....|.. .+..+ ++++ .
T Consensus 7 ~~~~i~~~~~i~Ap~e~Vw~altdp~~~~~W~~~~~~~--~~~~Gg~~~~~~~g~~------~~~~~-v~e~-------~ 70 (160)
T 2lak_A 7 ESFVVRREAHLAAPPAAVFALMTDPEKILRWMGTEAEV--EPEPGGLYLVNVTGAR------FARGS-FREV-------V 70 (160)
T ss_dssp SCCEEEEEEEESSCHHHHHHHHHCHHHHHHTSCSSEEE--SCSTTCCEEECSSTTC------CSSCC-EEEE-------E
T ss_pred CCceEEEEEEeCCCHHHHHHHhcChHHHhhhCCCccee--eccCCCEEEEEEeCCc------eEEEE-EEEE-------c
Confidence 45689999999999999999999999999999875433 2345555543111211 01111 1222 2
Q ss_pred CCCCceEEEEEeecCC-----CCceeeeEEEEEcCCCeeEEEeccce
Q 025783 197 PSGKKRDIEFKMIEGD-----FQLFEGKWSIEQVTYSCLQIIQNNIF 238 (248)
Q Consensus 197 P~g~~rrI~f~lVeGD-----FK~feG~W~fep~~~Gt~~vl~~~~~ 238 (248)
| +++|.|+...++ -......|.|++.++||++.++-..|
T Consensus 71 p---~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~gT~l~~~~~~~ 114 (160)
T 2lak_A 71 P---VHRLAYSFGWDGSEVVPPGSSLVEIDLIEQGGGTLLRLTHSGL 114 (160)
T ss_dssp T---TTEEEECCCCCSSSCCCTTSCEEEEEEEECSSSEEEEEEEECC
T ss_pred C---CCEEEEEEEecCCCCCCCCcEEEEEEEEECCCCEEEEEEEeCC
Confidence 3 378998876432 24678899999999999988865533
No 54
>2l9p_A Uncharacterized protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Staphylococcus epidermidis}
Probab=97.98 E-value=6.6e-05 Score=60.58 Aligned_cols=105 Identities=11% Similarity=0.072 Sum_probs=67.5
Q ss_pred cEEEEEEEEEcCCHHHHHHHHhChhhhccccCC----cceeEEEEecCCEEEEEEEeecceeeceEEEEeEEEEeecccc
Q 025783 118 SRRIRSKIEIDASLDTVWHILTDYEKLADFVPN----LAVSQVVEKNDNFVRLYQIGQQNLAFGIKFNAKGVLDCYEKDL 193 (248)
Q Consensus 118 ~r~V~asi~V~ap~e~Vw~vLTDYEryPeFIP~----~~~SrVLer~g~~vrv~QVG~~~i~fg~~FtarvvLdvtE~d~ 193 (248)
.+.|..++.|+||+++||+++||-+++++|.+. +...++--+.|+..+....+..+ ..+ ... .+.+
T Consensus 7 ~~~i~~~~~i~Ap~e~Vw~a~tdpe~~~~W~~p~~~~~~~~~~d~~~Gg~~~~~~~~~~G----~~~-~~g--~v~e--- 76 (164)
T 2l9p_A 7 KNKIIFTRTFSAPINKVFDAYTKRELFEQWFHPQDASVTVYDFNATKGGSAFYAIQAPQM----ISY-TIA--EYLQ--- 76 (164)
T ss_dssp SSEEEECCEESSCHHHHHHHHHCHHHHTTTCCCTTCEEEEEECCCSTTEEEEEEEEETTE----EEE-EEE--EESC---
T ss_pred CceEEEEEEeCCCHHHHHHHhCCHHHHHhccCCCCceeeEEEEeccCCCEEEEEEECCCC----CEE-EEE--EEEE---
Confidence 467899999999999999999999999999753 11222223355555442222111 122 222 2233
Q ss_pred ccCCCCCceEEEEEeecC--------CCCceeeeEEEEEcCCCeeEEEecc
Q 025783 194 EIFPSGKKRDIEFKMIEG--------DFQLFEGKWSIEQVTYSCLQIIQNN 236 (248)
Q Consensus 194 e~~P~g~~rrI~f~lVeG--------DFK~feG~W~fep~~~Gt~~vl~~~ 236 (248)
..| +++|.|+-.-+ ++....-.|.|++.++||+..++-.
T Consensus 77 -~~p---~~rl~~t~~~~~~~g~p~~~~~~~~v~~~l~~~~~gT~l~~~~~ 123 (164)
T 2l9p_A 77 -VDA---PYYIEYLDYFATSKGEKDTSMPGMHITLNFEEVKGKTTVTSTST 123 (164)
T ss_dssp -CBT---TTEEEEEEEEEBTTBSCCSSSCCEEEEEEECCCSSSEEEEEEEE
T ss_pred -EcC---CCEEEEEEEecCCCCCccCCCCceEEEEEEEECCCCEEEEEEEE
Confidence 234 47888877532 2335678899999999999888865
No 55
>2wql_A Major allergen DAU C 1; pathogenesis-related protein, plant defense; HET: P4C; 2.70A {Daucus carota} PDB: 2bk0_A
Probab=97.92 E-value=0.00013 Score=60.46 Aligned_cols=109 Identities=12% Similarity=0.126 Sum_probs=72.5
Q ss_pred cEEEEEEEEEcCCHHHHHHH-HhChhhh-ccccCCcceeEEEEecC--CEEEEEEEeecceeeceEEEEeEEEEeecccc
Q 025783 118 SRRIRSKIEIDASLDTVWHI-LTDYEKL-ADFVPNLAVSQVVEKND--NFVRLYQIGQQNLAFGIKFNAKGVLDCYEKDL 193 (248)
Q Consensus 118 ~r~V~asi~V~ap~e~Vw~v-LTDYEry-PeFIP~~~~SrVLer~g--~~vrv~QVG~~~i~fg~~FtarvvLdvtE~d~ 193 (248)
...+...+.+++||+++|.. +.|..++ |+.+|....+.-++.+| +.+|....+..+- ..+ .+-+++ +
T Consensus 3 v~~~~~E~~~~v~a~kl~ka~v~d~~~l~Pk~~P~~iks~~veGdg~~Gsir~~t~~~g~~---~~~-~kErle--~--- 73 (154)
T 2wql_A 3 AQSHSLEITSSVSAEKIFSGIVLDVDTVIPKAATGAYKSVEVKGDGGAGTVRIITLPEGSP---ITT-MTVRTD--A--- 73 (154)
T ss_dssp CCEEEEEEEESSCHHHHHHHHTTTHHHHHHHHSTTTCSEEEEESSSSTTCEEEEECCTTCS---CCE-EEEEEE--E---
T ss_pred CeEEEEEEEecCCHHHHHHHHhhcccccchhhcccceeEEEEECCCCCCeEEEEEEcCCCC---ceE-EEEEEE--E---
Confidence 35678889999999999975 6899996 99999887776666554 3455433322110 111 111222 1
Q ss_pred ccCCCCCceEEEEEeecCC-----CCceeeeEEEEEcCCC-eeEEEeccce
Q 025783 194 EIFPSGKKRDIEFKMIEGD-----FQLFEGKWSIEQVTYS-CLQIIQNNIF 238 (248)
Q Consensus 194 e~~P~g~~rrI~f~lVeGD-----FK~feG~W~fep~~~G-t~~vl~~~~~ 238 (248)
..+ +++.+.|++++|| ++.|....++.|.++| +.+..+-.|.
T Consensus 74 -iD~--~~~~~~y~iieGd~l~~~~~~~~~~ikv~p~~~ggsvvk~t~~Y~ 121 (154)
T 2wql_A 74 -VNK--EALSYDSTVIDGDILLGFIESIETHMVVVPTADGGSITKTTAIFH 121 (154)
T ss_dssp -EET--TTTEEEEEEEESGGGTTTEEEEEEEEEEEECTTSCEEEEEEEEEE
T ss_pred -Eeh--hhCEEEEEEEeccccccceEEEEEEEEEeeCCCCcEEEEEEEEEE
Confidence 112 3689999999997 5778889999999875 4445555544
No 56
>1vjh_A BET V I allergen family; structural genomics, center for eukaryotic structural genomics, protein structure initiative, CESG, plant protein; 2.10A {Arabidopsis thaliana} SCOP: d.129.3.1 PDB: 2q3q_A
Probab=97.89 E-value=9.4e-05 Score=58.64 Aligned_cols=80 Identities=8% Similarity=0.145 Sum_probs=60.9
Q ss_pred EEEEEEEEEcCCHHHHHHHHhChhhhccccCCcceeEEEEecCCEEEEEEEeecceeeceEEEEeEEEE-eeccccccCC
Q 025783 119 RRIRSKIEIDASLDTVWHILTDYEKLADFVPNLAVSQVVEKNDNFVRLYQIGQQNLAFGIKFNAKGVLD-CYEKDLEIFP 197 (248)
Q Consensus 119 r~V~asi~V~ap~e~Vw~vLTDYEryPeFIP~~~~SrVLer~g~~vrv~QVG~~~i~fg~~FtarvvLd-vtE~d~e~~P 197 (248)
..+..++.|++|+++||+++.|.+.+| |-.. |. . +++ +-+
T Consensus 5 g~~~~e~~i~~~a~k~w~~~~~~~~~p----~g~~----------------G~-------~-----~ie~iD~------- 45 (122)
T 1vjh_A 5 GALSVKFDVKCPADKFFSAFVEDTNRP----FEKN----------------GK-------T-----EIEAVDL------- 45 (122)
T ss_dssp EEEEEEEEESSCHHHHHHHHHHHTTSC----SSTT----------------CE-------E-----EEEEEET-------
T ss_pred cEEEEEEEecCCHHHHHHHHhhcccCC----ccCC----------------Cc-------c-----EEEEEec-------
Confidence 478899999999999999999986555 3111 11 0 111 111
Q ss_pred CCCceEEEEEeecCCC----CceeeeEEEEEc--CCCeeEEEecccee
Q 025783 198 SGKKRDIEFKMIEGDF----QLFEGKWSIEQV--TYSCLQIIQNNIFV 239 (248)
Q Consensus 198 ~g~~rrI~f~lVeGDF----K~feG~W~fep~--~~Gt~~vl~~~~~~ 239 (248)
+++.+.|++++||+ +.|.+.|+|.+. ++||.+..+-.+.-
T Consensus 46 --~~~~~~y~iieGd~~~~~~~~~~~~~v~~~~~~~gs~vkwt~~ye~ 91 (122)
T 1vjh_A 46 --VKKTMTIQMSGSEIQKYFKTLKGSIAVTPIGVGDGSHVVWTFHFEK 91 (122)
T ss_dssp --TTTEEEEEEECTTGGGTEEEEEEEEEEEECSSSSCEEEEEEEEEEE
T ss_pred --ccCEEEEEEEEccccccEEEEEEEEEEEEecCCCCeEEEEEEEEEE
Confidence 35899999999996 899999999998 78898888877764
No 57
>3eli_A AHSA1, AHA1 domain protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.80A {Silicibacter pomeroyi} SCOP: d.129.3.5
Probab=97.86 E-value=8.6e-05 Score=59.07 Aligned_cols=106 Identities=11% Similarity=0.045 Sum_probs=64.0
Q ss_pred EEEEEEEEcCCHHHHHHHHhChhhhccccCCc----c--eeEEEEecCCEEEEEEEeecceeeceEEEEeEEEEeecccc
Q 025783 120 RIRSKIEIDASLDTVWHILTDYEKLADFVPNL----A--VSQVVEKNDNFVRLYQIGQQNLAFGIKFNAKGVLDCYEKDL 193 (248)
Q Consensus 120 ~V~asi~V~ap~e~Vw~vLTDYEryPeFIP~~----~--~SrVLer~g~~vrv~QVG~~~i~fg~~FtarvvLdvtE~d~ 193 (248)
.+..++.|+||+++||+++||-+.+++|.+.- . ...+-.+.|+..+....+..+- .+.+..+ ++++
T Consensus 3 ~i~~~r~i~Ap~e~Vw~altdp~~~~~W~~~~~~~~~~~~~~~d~~~Gg~~~~~~~~~~G~--~~~~~g~-v~e~----- 74 (152)
T 3eli_A 3 DLRLEREFAVAPEALFAWVSDGAKLLQWWGPEGLHVPADQHDLDFTRLGPWFSVMVNGEGQ--RYKVSGQ-VTHV----- 74 (152)
T ss_dssp EEEEEEEESSCHHHHHHHTTCHHHHHHHCSSTTCBCCTTSBCCCCSSSEEEEEEEECTTCC--EEEEEEE-EEEE-----
T ss_pred eEEEEEEECCCHHHHHHHHcCHHHHhhccCCCCcccccceeEEcccCCcEEEEEEECCCCC--EEEEEEE-EEEE-----
Confidence 47788999999999999999999999997631 1 2223234555555432221110 0122222 1222
Q ss_pred ccCCCCCceEEEEEeecCCC-----CceeeeEEEEEcCCCeeEEEeccce
Q 025783 194 EIFPSGKKRDIEFKMIEGDF-----QLFEGKWSIEQVTYSCLQIIQNNIF 238 (248)
Q Consensus 194 e~~P~g~~rrI~f~lVeGDF-----K~feG~W~fep~~~Gt~~vl~~~~~ 238 (248)
.| +++|.|+...++- ....-.|.|++.++||+..|+-.-|
T Consensus 75 --~p---~~~l~~~~~~~~~~~~~~~~~~v~~~l~~~~~gT~l~l~~~~~ 119 (152)
T 3eli_A 75 --KP---PQSVGFTWGWHDDDDRRGAESHVMFIVEPCAKGARLILDHREL 119 (152)
T ss_dssp --ET---TTEEEEEEEEECTTSCEEEEEEEEEECCBC--CEEEEEEEESC
T ss_pred --cC---CCEEEEEEeecCCCCCCCCcEEEEEEEEECCCCEEEEEEEccC
Confidence 23 3788888764221 3566788999999999988864433
No 58
>2k5g_A Uncharacterized protein; structural genomiccs, protein structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis} SCOP: d.129.3.5
Probab=97.84 E-value=0.00012 Score=61.35 Aligned_cols=106 Identities=15% Similarity=0.157 Sum_probs=68.9
Q ss_pred EEEEEEEEEcCCHHHHHHHHhChhhhccccCCcceeEEEEecCCEEEEEEEeec-----------ceeeceEEEEeEEEE
Q 025783 119 RRIRSKIEIDASLDTVWHILTDYEKLADFVPNLAVSQVVEKNDNFVRLYQIGQQ-----------NLAFGIKFNAKGVLD 187 (248)
Q Consensus 119 r~V~asi~V~ap~e~Vw~vLTDYEryPeFIP~~~~SrVLer~g~~vrv~QVG~~-----------~i~fg~~FtarvvLd 187 (248)
..|..++.|+||+++||++|||-+.++++.+.+ .+-.+.|+..+....... ...-+..+..++ ++
T Consensus 19 ~~i~~~~~i~Ap~e~Vw~altdpe~~~~W~~~~---~~d~~~Gg~~~~~~~~~~~~~~~~p~~~~~~g~~~~~~g~v-~e 94 (191)
T 2k5g_A 19 QSIRFERLLPGPIERVWAWLADADKRARWLAGG---ELPRQPGQTFELHFNHAALTAETAPARYAQYDRPIVARHTL-LR 94 (191)
T ss_dssp SSEEEEEEESSSSHHHHHHHHCHHHHTTTSCCC---CCCSSTTCEEEEEECGGGSCCSSCCSSCSGGGSCEEEEEEE-EE
T ss_pred CeEEEEEEeCCCHHHHHHHHcCHHHHhhcCCCC---CCCccCCCEEEEEEcCCccccccCcccccccCCCceeEEEE-EE
Confidence 468899999999999999999999999999875 222345666554321110 000012333322 22
Q ss_pred eeccccccCCCCCceEEEEEeecCCC-CceeeeEEEEEcCCCeeEEEeccce
Q 025783 188 CYEKDLEIFPSGKKRDIEFKMIEGDF-QLFEGKWSIEQVTYSCLQIIQNNIF 238 (248)
Q Consensus 188 vtE~d~e~~P~g~~rrI~f~lVeGDF-K~feG~W~fep~~~Gt~~vl~~~~~ 238 (248)
+ .| +++|.|+...++. ....-.|.|++.++||+..++-.-|
T Consensus 95 ~-------~p---p~rl~~~~~~~~~~~~~~v~~~l~~~~~gT~l~~~~~~~ 136 (191)
T 2k5g_A 95 C-------EP---PRVLALTWGGGAGEAPSEVLFELSEAGEQVRLVLTHTRL 136 (191)
T ss_dssp E-------ET---TTEEEEECCCCSSSSCCEEEEEEEECSSSEEEEEEEECC
T ss_pred e-------cC---CCEEEEEeecCCCCCCEEEEEEEEEcCCCEEEEEEEecC
Confidence 2 23 3789988765432 2457789999999999888875543
No 59
>3uid_A Putative uncharacterized protein; SRPBCC superfamily, beta sandwich, function, structural genomics, TB structural genomics conso TBSGC; 1.57A {Mycobacterium smegmatis} SCOP: d.129.3.0
Probab=97.83 E-value=0.00079 Score=55.13 Aligned_cols=112 Identities=11% Similarity=0.119 Sum_probs=71.3
Q ss_pred EEEEcCCCcEEEEEEEEEcCCHHHHHHHHhChhhhcccc-CC---cceeEEEEecCCEEEEEEEeecceeeceEEEEeEE
Q 025783 110 EIKKLGRNSRRIRSKIEIDASLDTVWHILTDYEKLADFV-PN---LAVSQVVEKNDNFVRLYQIGQQNLAFGIKFNAKGV 185 (248)
Q Consensus 110 ~v~~l~~~~r~V~asi~V~ap~e~Vw~vLTDYEryPeFI-P~---~~~SrVLer~g~~vrv~QVG~~~i~fg~~Ftarvv 185 (248)
.+.+ ..+.+.+..++.|+||+++||+.+||-|.+.+|. |. +..+++--+.|+..+....+..+- ...+..+ +
T Consensus 5 ~~~~-~~~~~~i~~~r~i~Ap~e~Vw~a~Tdpe~l~~W~~p~~~~~~~~~~d~r~GG~~~~~~~~~~G~--~~~~~g~-~ 80 (168)
T 3uid_A 5 DVKH-DLDTLTLTITAEFAAPVTRIWQIYADPRQLEKVWGPPSHPATVVDHDLRPGGRVTYFMTGPDGE--KYAGYWE-I 80 (168)
T ss_dssp EEEE-ETTTTEEEEEEEESSCHHHHHHHHHSHHHHHHHHCCTTSCCEEEEECCSTTCEEEEEEECTTSC--EEEEEEE-E
T ss_pred EEEe-cCCCCEEEEEEEEcCCHHHHHHHhCCHHHHhhEeCCCCeeeeEEEEcccCCcEEEEEEECCCCC--EEeeEEE-E
Confidence 3344 3455689999999999999999999999999985 33 222333345667665433332221 0112222 2
Q ss_pred EEeeccccccCCCCCceEEEEEee----cCC----CCceeeeEEEEEcCCCeeEEEec
Q 025783 186 LDCYEKDLEIFPSGKKRDIEFKMI----EGD----FQLFEGKWSIEQVTYSCLQIIQN 235 (248)
Q Consensus 186 LdvtE~d~e~~P~g~~rrI~f~lV----eGD----FK~feG~W~fep~~~Gt~~vl~~ 235 (248)
+++ .| +++|.|+.. +|. .....-.|.|++.++||+..++-
T Consensus 81 ~ev-------~p---~~rlv~t~~~~~~~g~p~~~~~~s~vt~~l~~~~~gT~lt~~~ 128 (168)
T 3uid_A 81 TAV-------DE---PHSFSFLDGFADEDFNPNTDLPVSTNVYTFTEHDGGTRATYVG 128 (168)
T ss_dssp EEE-------ET---TTEEEEEEEEECTTSCBCSSCCCEEEEEEEEEETTEEEEEEEE
T ss_pred EEE-------eC---CcEEEEEEeeccCCCCcCCCCCcEEEEEEEEECCCCEEEEEEE
Confidence 222 23 378888874 231 23567899999999999988873
No 60
>2kew_A Uncharacterized protein YNDB; start domain, resonance assignments, lipid binding, structural genomics, unknown FU PSI-2; NMR {Bacillus subtilis subsp} PDB: 2kte_A
Probab=97.78 E-value=1.6e-05 Score=63.59 Aligned_cols=98 Identities=15% Similarity=0.165 Sum_probs=64.8
Q ss_pred CcEEEEEEEEEcCCHHHHHHHHhChhhhccccCCcceeEEEEecCCEEEEEEEeecceeeceEEEEeEEEEeeccccccC
Q 025783 117 NSRRIRSKIEIDASLDTVWHILTDYEKLADFVPNLAVSQVVEKNDNFVRLYQIGQQNLAFGIKFNAKGVLDCYEKDLEIF 196 (248)
Q Consensus 117 ~~r~V~asi~V~ap~e~Vw~vLTDYEryPeFIP~~~~SrVLer~g~~vrv~QVG~~~i~fg~~FtarvvLdvtE~d~e~~ 196 (248)
....|..++.|+||+++||++|||.++|++|++.+. .-.+.|+..++. ... |. +..+ ++++ .
T Consensus 8 ~~~~i~~~~~i~Ap~e~Vw~altd~~~~~~W~~~~~---~~~~~Gg~~~~~-~~~-----g~-~~~~-v~e~-------~ 69 (152)
T 2kew_A 8 ALPDITKSITLEAPIQKVWETVSTSEGIAKWFMPND---FQLKEGQEFHLQ-SPF-----GP-SPCK-VLAV-------Q 69 (152)
T ss_dssp SSCCEEEEEEECSCHHHHHHHSSSSHHHHHHHCSCC---CCSCSSCCBCSS-SSC-----CS-CCBE-EEEE-------E
T ss_pred cccEEEEEEEECCCHHHHHHHHhCHHHHHHhcCCCC---CCCCCCCEEEEE-ecC-----Cc-eEEE-EEEE-------e
Confidence 345789999999999999999999999999988721 111233333211 010 11 1111 2222 2
Q ss_pred CCCCceEEEEEeecCCCCceeeeEEEEEcCCCeeEEEeccce
Q 025783 197 PSGKKRDIEFKMIEGDFQLFEGKWSIEQVTYSCLQIIQNNIF 238 (248)
Q Consensus 197 P~g~~rrI~f~lVeGDFK~feG~W~fep~~~Gt~~vl~~~~~ 238 (248)
| +++|.|+...+ .....|.|++.++||+..++-.-|
T Consensus 70 p---~~~l~~~~~~~---~~~~~~~l~~~~~gT~l~~~~~~~ 105 (152)
T 2kew_A 70 A---PTELSFEWDTE---GWVVTFQLEDLGEKTGFTLIHSGW 105 (152)
T ss_dssp T---TTEEEEECTTS---CCEEEEEEECCSSCEEEEEEECCS
T ss_pred C---CcEEEEEEccC---CEEEEEEEEECCCCEEEEEEEEec
Confidence 3 37899987655 567889999999999988875544
No 61
>1ln1_A PC-TP, phosphatidylcholine transfer protein; start domain, lipid binding protein; HET: DLP; 2.40A {Homo sapiens} SCOP: d.129.3.2 PDB: 1ln2_A* 1ln3_A*
Probab=97.69 E-value=0.0045 Score=51.46 Aligned_cols=59 Identities=12% Similarity=-0.014 Sum_probs=51.4
Q ss_pred cCCceEEEEEEcCCCc-EEEEEEEEEc-CCHHHHHHHHhChhhhccccCCcceeEEEEecC
Q 025783 103 HGDGVCIEIKKLGRNS-RRIRSKIEID-ASLDTVWHILTDYEKLADFVPNLAVSQVVEKND 161 (248)
Q Consensus 103 ~~~~v~V~v~~l~~~~-r~V~asi~V~-ap~e~Vw~vLTDYEryPeFIP~~~~SrVLer~g 161 (248)
..+++.|..+..++.. ..+.+...|+ +++++|+++|.|.+.+++|.|.|.+++|++.++
T Consensus 35 ~~~~v~v~~~~~~~~~~~~~k~~~~i~~~~~~~v~~~l~d~~~r~~Wd~~~~~~~vle~~~ 95 (214)
T 1ln1_A 35 ETSGISIYRLLDKKTGLYEYKVFGVLEDCSPTLLADIYMDSDYRKQWDQYVKELYEQECNG 95 (214)
T ss_dssp EETTEEEEEEEETTTTEEEEEEEEEETTSCHHHHHHHHHCHHHHHHHCTTEEEEEEEEETT
T ss_pred ECCCeEEEEeccCCCCcEEEEEEEEECCCCHHHHHHHHcCHHHHHHHHHHHhhEEEeccCC
Confidence 3567888888765444 6889999995 999999999999999999999999999999865
No 62
>4fpw_A CALU16; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 2.50A {Micromonospora echinospora} PDB: 2luz_A
Probab=97.65 E-value=0.00018 Score=60.51 Aligned_cols=99 Identities=16% Similarity=0.156 Sum_probs=68.8
Q ss_pred CCcEEEEEEEEEcCCHHHHHHHHhChhhhccccCCcceeEEEEecCCEEEEEEEeecceeeceEEEEeEEEEeecccccc
Q 025783 116 RNSRRIRSKIEIDASLDTVWHILTDYEKLADFVPNLAVSQVVEKNDNFVRLYQIGQQNLAFGIKFNAKGVLDCYEKDLEI 195 (248)
Q Consensus 116 ~~~r~V~asi~V~ap~e~Vw~vLTDYEryPeFIP~~~~SrVLer~g~~vrv~QVG~~~i~fg~~FtarvvLdvtE~d~e~ 195 (248)
.+.+.|..++.|++|+++||+.+||-+.+++|.+.. ..--+.|+..+.. + ... -.+.+ .
T Consensus 18 ~~~~~i~~~r~i~Appe~Vw~alTdpe~l~~W~~p~---~~d~~~Gg~~~~~--~--------~~~----g~v~e----~ 76 (181)
T 4fpw_A 18 GEARSIIIRQRYDAPVDEVWSACTDPNRINRWFIEP---KGDLREGGNFALQ--G--------NAS----GDILR----C 76 (181)
T ss_dssp EEEEEEEEEEEESSCHHHHHHHHHCHHHHHHHSCCE---ESCCSTTCEEEES--S--------SCE----EECCE----E
T ss_pred CCCceEEEEEEECCCHHHHHHHHcChHHHhhccCCC---ccCCCCCCEEEEE--e--------cCC----EEEEE----E
Confidence 445789999999999999999999999999998653 2222344443321 1 001 11222 2
Q ss_pred CCCCCceEEEEEeecCCCCceeeeEEEEEcCCCeeEEEeccce
Q 025783 196 FPSGKKRDIEFKMIEGDFQLFEGKWSIEQVTYSCLQIIQNNIF 238 (248)
Q Consensus 196 ~P~g~~rrI~f~lVeGDFK~feG~W~fep~~~Gt~~vl~~~~~ 238 (248)
.| +++|.|+...++-....-.|.|++.++||+..++-..+
T Consensus 77 ~p---p~rl~~tw~~~~~~~s~vt~~l~~~~~gT~Ltl~~~~~ 116 (181)
T 4fpw_A 77 EP---PRRLTISWVYEGKPDSEVELRLSEEGDGTLLELEHATT 116 (181)
T ss_dssp ET---TTEEEEEEBCTTSCCEEEEEEEEEETTEEEEEEEEEES
T ss_pred cC---CcEEEEEEEcCCCCcEEEEEEEEECCCcEEEEEEEEcC
Confidence 33 47899998765544567899999999999998876554
No 63
>2luz_A CALU16; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Micromonospora echinospora}
Probab=97.58 E-value=0.0004 Score=59.21 Aligned_cols=96 Identities=17% Similarity=0.221 Sum_probs=66.8
Q ss_pred CcEEEEEEEEEcCCHHHHHHHHhChhhhccccCCcceeEEEEecCCEEEEEEEeecceeeceEEEEeEEEEeeccccccC
Q 025783 117 NSRRIRSKIEIDASLDTVWHILTDYEKLADFVPNLAVSQVVEKNDNFVRLYQIGQQNLAFGIKFNAKGVLDCYEKDLEIF 196 (248)
Q Consensus 117 ~~r~V~asi~V~ap~e~Vw~vLTDYEryPeFIP~~~~SrVLer~g~~vrv~QVG~~~i~fg~~FtarvvLdvtE~d~e~~ 196 (248)
..+.|..+..+++|+++||+.|||-+.+++|++. ..+-.+.|+..++. +....+ ++++.
T Consensus 30 ~~~~l~i~R~f~Ap~e~VW~AlTdpe~l~~W~~~---~~~d~r~GG~~~~~----------~~~~g~-v~ev~------- 88 (192)
T 2luz_A 30 EARSIIIRQRYDAPVDEVWSACTDPNRINRWFIE---PKGDLREGGNFALQ----------GNASGD-ILRCE------- 88 (192)
T ss_dssp EEEEEEEEEEESSCHHHHHHHHHCHHHHTTTSCC---EEECCSTTSEEEET----------TSEEEE-EEEEE-------
T ss_pred CceEEEEEEEeCCCHHHHHHHHcCHHHHheeeCC---CcccCccCcEEEee----------ccccce-EEEEe-------
Confidence 3468999999999999999999999999999864 33444556655431 111111 23332
Q ss_pred CCCCceEEEEEeecCCCCceeeeEEEEEcCCCeeEEEecc
Q 025783 197 PSGKKRDIEFKMIEGDFQLFEGKWSIEQVTYSCLQIIQNN 236 (248)
Q Consensus 197 P~g~~rrI~f~lVeGDFK~feG~W~fep~~~Gt~~vl~~~ 236 (248)
| +++|.|.....+-....-.|.|++.++||+..|+-.
T Consensus 89 p---p~rL~~tw~~~~~~~~~vt~~L~~~g~gT~Ltl~h~ 125 (192)
T 2luz_A 89 P---PRRLTISWVYEGKPDSEVELRLSEEGDGTLLELEHA 125 (192)
T ss_dssp T---TTEEEEEEEESSSCEEEEEEEEEEETTEEEEEEEEE
T ss_pred c---CeeEEEEEeecCCCCceEEEEEEEcCCcEEEEEEEE
Confidence 3 378888876544444556899999999999888754
No 64
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=97.47 E-value=0.00024 Score=67.40 Aligned_cols=108 Identities=10% Similarity=0.100 Sum_probs=80.2
Q ss_pred EEEEEEEcCCHHHHHHHHhChhhhccccCCcceeEEEEecCC---EEEEEEEeecceeeceEEEEeEEEEeeccccccCC
Q 025783 121 IRSKIEIDASLDTVWHILTDYEKLADFVPNLAVSQVVEKNDN---FVRLYQIGQQNLAFGIKFNAKGVLDCYEKDLEIFP 197 (248)
Q Consensus 121 V~asi~V~ap~e~Vw~vLTDYEryPeFIP~~~~SrVLer~g~---~vrv~QVG~~~i~fg~~FtarvvLdvtE~d~e~~P 197 (248)
+..+..|++|+++||+..+|.++++++.|-....+++...+. ...+..++ .+++..++ ++.++ ..|
T Consensus 3 ~~~~~~i~~p~~~v~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~G~~~~~~~-----~~~~w~~~--~~~t~----~~~ 71 (516)
T 3oh8_A 3 LTTSHFIPFPREMVWDWHTRKGAVARLTPPFIPLNPITQAERLADGTTIFSLP-----AGLKWVAR--HDLSG----FLN 71 (516)
T ss_dssp EEEEEEESSCHHHHHHHHHSTTHHHHHSCTTSSCEECSCCSCSSSCEEEEECS-----TTCEEEEE--ECGGG----CBT
T ss_pred EEEEEEccCCHHHHHHHhcCcchHHHhCCCCCceEEecCCCCCcCCeEEEecC-----CCcEEEEE--Ecccc----ccC
Confidence 677889999999999999999999999999999999865432 11222221 13333333 22255 234
Q ss_pred CCCceEEEEEeecCC---CCceeeeEEEEEcCCCeeEEEeccceeccc
Q 025783 198 SGKKRDIEFKMIEGD---FQLFEGKWSIEQVTYSCLQIIQNNIFVKLC 242 (248)
Q Consensus 198 ~g~~rrI~f~lVeGD---FK~feG~W~fep~~~Gt~~vl~~~~~~~~~ 242 (248)
+++...+++.|| |+.++-.+.|++.++||...-..++-+|..
T Consensus 72 ---~~~F~d~~~~gp~~~~~~w~h~h~f~~~~~gt~~~d~~~~~~p~~ 116 (516)
T 3oh8_A 72 ---GSRFTDVCLTAPVKALANWRHVHNFVDQDGGTLITDSVSTRLPAS 116 (516)
T ss_dssp ---TTEEEEECCSCSSGGGSSCEEEEEEEEETTEEEEEEEEECSSCGG
T ss_pred ---CCeEEEEeccCcccceeeeEEEEEEEEcCCCcEEEEEEEeeCcHH
Confidence 478999999999 999999999999999988777777666643
No 65
>3fo5_A Thioesterase, adipose associated, isoform BFIT2; orthogonal bundle, consortium, lipid transport; HET: 1PE TCE; 2.00A {Homo sapiens}
Probab=97.23 E-value=0.0089 Score=53.17 Aligned_cols=123 Identities=10% Similarity=0.138 Sum_probs=77.8
Q ss_pred CCceEEEEEEcCCCcEEEEEEEEEcCCHHHHHHHHhChhhhccccCCcceeEEEEecCCEEEEEEEeecceeeceEEEEe
Q 025783 104 GDGVCIEIKKLGRNSRRIRSKIEIDASLDTVWHILTDYEKLADFVPNLAVSQVVEKNDNFVRLYQIGQQNLAFGIKFNAK 183 (248)
Q Consensus 104 ~~~v~V~v~~l~~~~r~V~asi~V~ap~e~Vw~vLTDYEryPeFIP~~~~SrVLer~g~~vrv~QVG~~~i~fg~~Ftar 183 (248)
.++|.|.... ..+...+.+...|++|+++||++|.|.+..++|.+++.+++++++-++...++|+..... +.....|
T Consensus 74 ~~gv~Vy~~~-~~~~l~~k~~~~v~~~~~~v~~~L~D~~~R~~WD~~~~~~~vle~id~~~ivY~~~~p~~--~~~v~~R 150 (258)
T 3fo5_A 74 ISQVRLYTLE-DDKFLSFHMEMVVHVDAAQAFLLLSDLRQRPEWDKHYRSVELVQQVDEDDAIYHVTSPAL--GGHTKPQ 150 (258)
T ss_dssp ETTEEEEEEE-CSSCEEEEEEEEESSCHHHHHHHHHCGGGGGGTCTTCCEEEEEEEEETTEEEEEEEECCC--TTCSSCE
T ss_pred CCCeEEEEEE-CCCceEEEEEEEEeCCHHHHHHHHhCchhHhHhhhhccEEEEEEEcCCCeEEEEEecCCc--cCCCCCC
Confidence 4577777654 344557889999999999999999999999999999999999987433234455532211 0001111
Q ss_pred --EEEEeeccccccCCCCCceEEEEEeecCC-------C---CceeeeEEEEEcCCCeeEE
Q 025783 184 --GVLDCYEKDLEIFPSGKKRDIEFKMIEGD-------F---QLFEGKWSIEQVTYSCLQI 232 (248)
Q Consensus 184 --vvLdvtE~d~e~~P~g~~rrI~f~lVeGD-------F---K~feG~W~fep~~~Gt~~v 232 (248)
+.+....+ ..++|..--|..+.++-+ | ..+.+.|.++|.+++.+.+
T Consensus 151 DFV~lr~~r~---~~~~G~~yvi~~~SV~hp~~Pp~~g~VR~~~~~sg~~I~P~~~~~t~V 208 (258)
T 3fo5_A 151 DFVILASRRK---PCDNGDPYVIALRSVTLPTHRETPEYRRGETLCSGFCLWREGDQLTKV 208 (258)
T ss_dssp EEEEEEEEEC---CSSTTCCEEEEEEEEECTTSCCCTTSEECCCSSEEEEEEEEETTEEEE
T ss_pred EEEEEEEEEe---ccCCCCEEEEEEEeccCCCCCCCCCCEEEEEcCcEEEEEECCCCCEEE
Confidence 22222211 012222234566666532 1 4678999999998875443
No 66
>3ni8_A PFC0360W protein; heat shock, malaria, ATPase, structural genomics consortium, unknown function; 2.50A {Plasmodium falciparum}
Probab=97.16 E-value=0.0022 Score=52.32 Aligned_cols=103 Identities=13% Similarity=0.046 Sum_probs=65.8
Q ss_pred CCCcEEEEEEEEEcCCHHHHHHHHhChhhhccccCCcceeEEEEecCCEEEEEEEeecceeeceEEEEeEEEEeeccccc
Q 025783 115 GRNSRRIRSKIEIDASLDTVWHILTDYEKLADFVPNLAVSQVVEKNDNFVRLYQIGQQNLAFGIKFNAKGVLDCYEKDLE 194 (248)
Q Consensus 115 ~~~~r~V~asi~V~ap~e~Vw~vLTDYEryPeFIP~~~~SrVLer~g~~vrv~QVG~~~i~fg~~FtarvvLdvtE~d~e 194 (248)
..+.+.|..++.|+||+++||+.+||-+.+.+|.+. ..+++-.+.|+..+.. .| . +..+ ++++.
T Consensus 15 ~~~~~~i~~~r~~~ap~e~Vw~A~Tdpe~l~~W~~g-~~~~~d~~~GG~~~~~-~G--~------~~g~-v~ev~----- 78 (158)
T 3ni8_A 15 YFQGMSFEITEEYYVPPEVLFNAFTDAYTLTRLSRG-SLAEVDLKVGGKFSLF-SG--S------ILGE-FTEIT----- 78 (158)
T ss_dssp ---CCCEEEEEEESSCHHHHHHHHHCHHHHHHHTTT-SCCEECCSTTCEEEET-TT--T------EEEE-EEEEE-----
T ss_pred CCCCceEEEEEEECCCHHHHHHHhcCHHHHHhhcCC-CccEEEccCCCEEEEe-cC--C------EEEE-EEEEe-----
Confidence 344567888999999999999999999999999983 2334444556665431 11 1 1112 23322
Q ss_pred cCCCCCceEEEEEeecCCC---CceeeeEEEEEc-CCCeeEEEeccce
Q 025783 195 IFPSGKKRDIEFKMIEGDF---QLFEGKWSIEQV-TYSCLQIIQNNIF 238 (248)
Q Consensus 195 ~~P~g~~rrI~f~lVeGDF---K~feG~W~fep~-~~Gt~~vl~~~~~ 238 (248)
| +++|.|..--++. ..-.-.|.|++. ++||+..|+-.-|
T Consensus 79 --p---~~rlv~tw~~~~~~~~~~s~vt~~l~~~~~~~T~ltl~~~g~ 121 (158)
T 3ni8_A 79 --K---PHKIVEKWKFRDWNECDYSTVTVEFISVKENHTKLKLTHNNI 121 (158)
T ss_dssp --T---TTEEEEEEEETTSCSSCCEEEEEEEEEEETTEEEEEEEEECC
T ss_pred --C---CcEEEEEEEecCCCCCCcEEEEEEEEecCCCCEEEEEEEEcc
Confidence 3 3788876553332 235678999995 6789988876544
No 67
>1x53_A Activator of 90 kDa heat shock protein ATPase homolog 1; AHA1, HSP90,DUF704, C-terminal domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.129.3.5
Probab=97.14 E-value=0.00088 Score=52.71 Aligned_cols=97 Identities=12% Similarity=0.132 Sum_probs=63.8
Q ss_pred cEEEEEEEEEcCCHHHHHHHHhChhhhccccCCcceeEEEEecCCEEEEEEEeecceeeceEEEEeEEEEeeccccccCC
Q 025783 118 SRRIRSKIEIDASLDTVWHILTDYEKLADFVPNLAVSQVVEKNDNFVRLYQIGQQNLAFGIKFNAKGVLDCYEKDLEIFP 197 (248)
Q Consensus 118 ~r~V~asi~V~ap~e~Vw~vLTDYEryPeFIP~~~~SrVLer~g~~vrv~QVG~~~i~fg~~FtarvvLdvtE~d~e~~P 197 (248)
...|..++.|+||+++||+++||-+++++|.+.... +-.+.|+..+.. + |. +..+ ++++. |
T Consensus 10 ~~~i~~~~~i~ap~e~Vw~altdp~~~~~W~~~~~~--~d~~~Gg~~~~~--~------G~-~~g~-v~e~~-------p 70 (145)
T 1x53_A 10 TCKITLKETFLTSPEELYRVFTTQELVQAFTHAPAT--LEADRGGKFHMV--D------GN-VSGE-FTDLV-------P 70 (145)
T ss_dssp EEEEEEEEEESSCHHHHHHHTTCHHHHHHHSCSCCB--CCCSTTCCCBBT--T------TT-EECC-EEEEE-------T
T ss_pred ccEEEEEEEECCCHHHHHHHhCCHHHHHHhcCCCce--EECCCCCEEEEE--C------Ce-eEEE-EEEEe-------C
Confidence 367999999999999999999999999999765432 223344443221 0 11 1122 22222 3
Q ss_pred CCCceEEEEEeecCCC---CceeeeEEEEEcCCCeeEEEecc
Q 025783 198 SGKKRDIEFKMIEGDF---QLFEGKWSIEQVTYSCLQIIQNN 236 (248)
Q Consensus 198 ~g~~rrI~f~lVeGDF---K~feG~W~fep~~~Gt~~vl~~~ 236 (248)
+++|.|+-...+. ....-.|.|++.++||+..++-.
T Consensus 71 ---~~~l~~~~~~~~~~~~~~~~v~~~l~~~~~gT~l~~~~~ 109 (145)
T 1x53_A 71 ---EKHIVMKWRFKSWPEGHFATITLTFIDKNGETELCMEGR 109 (145)
T ss_dssp ---TTEEEEEEEETTSCTTCCEEEEEECCBCSSCEEEEEEEE
T ss_pred ---CCEEEEEEecCCCCCCCcEEEEEEEEECCCCEEEEEEEE
Confidence 3788877654332 23567899999999999888743
No 68
>3p0l_A Steroidogenic acute regulatory protein, mitochond; structural genomics consortium, SGC, start domain, cholester transport, cholesterol; 3.40A {Homo sapiens}
Probab=96.90 E-value=0.0064 Score=51.40 Aligned_cols=65 Identities=15% Similarity=0.274 Sum_probs=55.7
Q ss_pred ecCCceEEEEEEcCCCcEEEEEEEEEcCCHHHHHHHH-hChhhhccccCCcceeEEEEecCCEEEE
Q 025783 102 LHGDGVCIEIKKLGRNSRRIRSKIEIDASLDTVWHIL-TDYEKLADFVPNLAVSQVVEKNDNFVRL 166 (248)
Q Consensus 102 l~~~~v~V~v~~l~~~~r~V~asi~V~ap~e~Vw~vL-TDYEryPeFIP~~~~SrVLer~g~~vrv 166 (248)
...+++.|..+..++....+.+...|++++++||++| .|.+..++|.+.|.+++++++-++...+
T Consensus 38 ~~~~gv~vy~~~~~~~g~~~k~~~~v~~~~~~v~~~l~~d~~~r~~Wd~~~~~~~vle~~~~~t~I 103 (221)
T 3p0l_A 38 QQDNGDKVMSKVVPDVGKVFRLEVVVDQPMERLYEELVERMEAMGEWNPNVKEIKVLQKIGKDTFI 103 (221)
T ss_dssp ECTTSCEEEEEECSSSCEEEEEEEEESSCHHHHHHHHTTTGGGTTTSCTTCSEEEEEEECSSSEEE
T ss_pred ecCCCcEEEEEEcCCCceEEEEEEEEcCCHHHHHHHHHhccchhhhcCcchheEEEEEecCCCeEE
Confidence 3568899999998765678889999999999999998 7999999999999999999996544433
No 69
>1zxf_A CALC; SELF-sacrificing resistance protein, structural genomics, PSI, protein structure initiative; NMR {Micromonospora echinospora} SCOP: d.129.3.5 PDB: 2gkc_A* 2gkd_A 2l65_A*
Probab=96.20 E-value=0.022 Score=45.65 Aligned_cols=101 Identities=13% Similarity=0.054 Sum_probs=62.8
Q ss_pred EEEEEEEEEcCCHHHHHHHHhChhhhccccC-Cc------ceeEEEEecCCEEEEEEEeecceeeceEEEEeEEEEeecc
Q 025783 119 RRIRSKIEIDASLDTVWHILTDYEKLADFVP-NL------AVSQVVEKNDNFVRLYQIGQQNLAFGIKFNAKGVLDCYEK 191 (248)
Q Consensus 119 r~V~asi~V~ap~e~Vw~vLTDYEryPeFIP-~~------~~SrVLer~g~~vrv~QVG~~~i~fg~~FtarvvLdvtE~ 191 (248)
..|..++.|+||+++||+.+|| .+.++++ .. ...++- +.|+... . .+..+-.+.. . .++++.
T Consensus 4 ~~i~~~r~~~Ap~e~Vw~A~Td--~l~~W~~p~~~~~~~~~~~~~d-r~GG~~~-~-~~~~G~~~~~---g-~v~ev~-- 72 (155)
T 1zxf_A 4 PFVRHSVTVKADRKTAFKTFLE--GFPEWWPNNFRTTKVGAPLGVD-KKGGRWY-E-IDEQGEEHTF---G-LIRKVD-- 72 (155)
T ss_dssp SCEEEEEEESSHHHHHHHHHTT--CSSSSSSGGGSTTTTCSSCEEE-TTTTEEE-C-CCTTTSCCCC---E-EEEEEE--
T ss_pred ceEEEEEEEeCCHHHHHHHHHh--hHHhhcCCCccccCCCceEEEE-CCCCEEE-E-ECCCCCeEeE---E-EEEEEC--
Confidence 4688899999999999999999 4777753 21 345555 7777652 1 2211110000 1 223333
Q ss_pred ccccCCCCCceEEEEEee-cCCC-----CceeeeEEEEEcCCC-eeEEEeccce
Q 025783 192 DLEIFPSGKKRDIEFKMI-EGDF-----QLFEGKWSIEQVTYS-CLQIIQNNIF 238 (248)
Q Consensus 192 d~e~~P~g~~rrI~f~lV-eGDF-----K~feG~W~fep~~~G-t~~vl~~~~~ 238 (248)
| +++|.|.-- .++. ....-.|.|++.++| |+..|+-..|
T Consensus 73 -----p---p~rl~~tw~~~~~~~~~~~~~s~vt~~l~~~~~g~T~ltl~~~~~ 118 (155)
T 1zxf_A 73 -----E---PDTLVIGWRLNGFGRIDPDNSSEFTVTFVADGQKKTRVDVEHTHF 118 (155)
T ss_dssp -----T---TTEEEEECCCSSSSSCCCSSCCCEEEEEEEETTTEEEEEEEECSS
T ss_pred -----C---CCEEEEEEecCCCCCCCCCCcEEEEEEEEECCCCcEEEEEEEecc
Confidence 3 478988843 3321 234568999999988 9888875544
No 70
>2e3n_A Lipid-transfer protein CERT; ceramide transfer, lipid transport; HET: 6CM; 1.40A {Homo sapiens} PDB: 2e3m_A* 2e3o_A* 2e3p_A* 2e3q_A* 2e3r_A* 2e3s_A 2z9y_A* 3h3q_A* 3h3r_A* 3h3s_A* 3h3t_A* 2z9z_A*
Probab=95.85 E-value=0.033 Score=47.97 Aligned_cols=66 Identities=15% Similarity=0.227 Sum_probs=50.3
Q ss_pred cCCceEEEEEEcCCCcE---EEEEEEEE-cCCHHHHHHHHhChhhhccccCCcceeEEEEe-cCCEEEEEE
Q 025783 103 HGDGVCIEIKKLGRNSR---RIRSKIEI-DASLDTVWHILTDYEKLADFVPNLAVSQVVEK-NDNFVRLYQ 168 (248)
Q Consensus 103 ~~~~v~V~v~~l~~~~r---~V~asi~V-~ap~e~Vw~vLTDYEryPeFIP~~~~SrVLer-~g~~vrv~Q 168 (248)
..+++.|..+..+++.. .+.+...+ .+++++|++++.|.+.+++|.+.+.+++++++ +++...+++
T Consensus 54 ~~~gv~vy~~~~~~~g~~~~~~K~~~~~~~~~~~~v~~~l~d~~~r~~Wd~~~~~~~vle~i~~~~~i~y~ 124 (255)
T 2e3n_A 54 EEGEMKVYRREVEENGIVLDPLKATHAVKGVTGHEVCNYFWNVDVRNDWETTIENFHVVETLADNAIIIYQ 124 (255)
T ss_dssp EETTEEEEEECCEETTEECCCEEEEEEEETCCHHHHHHHHHCGGGHHHHCCSEEEEEEEEEEETTEEEEEE
T ss_pred eCCCEEEEEEEcCCCCceeeeEEEEEEEcCCCHHHHHHHHhCcchHhhhhhhcceeEEEEEcCCCCEEEEE
Confidence 45678888776554442 35555555 49999999999999999999999999999999 555544443
No 71
>2pso_A STAR-related lipid transfer protein 13; alpha and beta protein, lipid binding, helix swapping, struc genomics, structural genomics consortium, SGC; 2.80A {Homo sapiens} SCOP: d.129.3.2
Probab=95.72 E-value=0.44 Score=41.03 Aligned_cols=57 Identities=21% Similarity=0.314 Sum_probs=46.6
Q ss_pred ecCCceEEEEEEcCCCc--EEEEEEEEEcCCHHHHH-HHHhChhhhccccCCcceeEEEEecC
Q 025783 102 LHGDGVCIEIKKLGRNS--RRIRSKIEIDASLDTVW-HILTDYEKLADFVPNLAVSQVVEKND 161 (248)
Q Consensus 102 l~~~~v~V~v~~l~~~~--r~V~asi~V~ap~e~Vw-~vLTDYEryPeFIP~~~~SrVLer~g 161 (248)
...+++.|..++.++|+ +.+.+...|++++++++ .++.| .++|.+.|.+++++++-+
T Consensus 56 ~~~~gi~V~~k~~~~~~~~~~~K~~~~v~~~~~~v~~~ll~d---r~~Wd~~~~~~~vle~id 115 (237)
T 2pso_A 56 SSTDNTDLAFKKVGDGNPLKLWKASVEVEAPPSVVLNRVLRE---RHLWDEDFVQWKVVETLD 115 (237)
T ss_dssp CCSSSCEEEEECCCSSCCCCEEEEEEEESSCHHHHHHHHHHC---GGGTCTTBCCCEEEEEEE
T ss_pred ecCCCeEEEEEEcCCCCCcEEEEEEEEEcCChHHHHHHHHhh---hhhHHhhhceEEEEEEcC
Confidence 34678999998874443 57889999999998875 68888 689999999999999843
No 72
>1jss_A Stard4, cholesterol-regulated start protein 4; start domain, structural genomics, PSI, protein structure initiative; 2.20A {Mus musculus} SCOP: d.129.3.2
Probab=95.48 E-value=0.042 Score=46.60 Aligned_cols=67 Identities=12% Similarity=0.046 Sum_probs=53.5
Q ss_pred cCCceEEEEEEcCC-CcEEEEEEEEEcCCHHHHHHHHhChhhhccccCCcceeEEEEecCC-EEEEEEE
Q 025783 103 HGDGVCIEIKKLGR-NSRRIRSKIEIDASLDTVWHILTDYEKLADFVPNLAVSQVVEKNDN-FVRLYQI 169 (248)
Q Consensus 103 ~~~~v~V~v~~l~~-~~r~V~asi~V~ap~e~Vw~vLTDYEryPeFIP~~~~SrVLer~g~-~vrv~QV 169 (248)
..+++.|....... +...+.+...|++++++||++|.|.+..++|.++|.+++++++-++ ....+++
T Consensus 50 ~~~gv~vy~~~~~~~~~~~~k~~~~v~~~~~~v~~~l~d~~~r~~Wd~~~~~~~vle~id~~~~I~y~~ 118 (224)
T 1jss_A 50 KAKDVTVWRKPSEEFNGYLYKAQGVMDDVVNNVIDHIRPGPWRLDWDRLMTSLDVLEHFEENCCVMRYT 118 (224)
T ss_dssp EETTEEEEEEECSSSSSEEEEEEEEESSCHHHHHHHHSSSTTHHHHCSSEEEEEEEEECSTTEEEEEEE
T ss_pred ECCCEEEEEEeccCCCceEEEEEEEEeCCHHHHHHHHhCcccccccccceeeEEEEEEcCCCeEEEEEE
Confidence 34788888885443 4467788899999999999999999988999999999999998543 3333444
No 73
>1em2_A MLN64 protein; beta barrel, lipid binding protein; HET: TAR; 2.20A {Homo sapiens} SCOP: d.129.3.2
Probab=95.41 E-value=0.055 Score=45.73 Aligned_cols=66 Identities=11% Similarity=0.213 Sum_probs=53.3
Q ss_pred CceEEEEEEcCCCcEEEEEEEEEcCCHHHHH-HHHhChhhhccccCCcceeEEEEecC-CEEEEEEEe
Q 025783 105 DGVCIEIKKLGRNSRRIRSKIEIDASLDTVW-HILTDYEKLADFVPNLAVSQVVEKND-NFVRLYQIG 170 (248)
Q Consensus 105 ~~v~V~v~~l~~~~r~V~asi~V~ap~e~Vw-~vLTDYEryPeFIP~~~~SrVLer~g-~~vrv~QVG 170 (248)
+++.|.-...+++...+.+...|++++++|| +++.|.+..++|.+.|.++++|++-+ +....+++.
T Consensus 52 ~g~~vy~~~~~~~g~~~k~~~~v~~~~~~v~~~~~~d~~~r~~Wd~~~~~~~vle~~~~~t~I~~~~~ 119 (229)
T 1em2_A 52 YGDTVYTIEVPFHGKTFILKTFLPCPAELVYQEVILQPERMVLWNKTVTACQILQRVEDNTLISYDVS 119 (229)
T ss_dssp TCCEEEEEEETTTEEEEEEEEEESSCHHHHHHHTTTCHHHHTTTCTTEEEEEEEEEETTTEEEEEEEE
T ss_pred CCCEEEEEecCCCCceEEEEEEecCCHHHHHHHHHhCccchhhcccccceEEEEEecCCCeEEEEEEe
Confidence 6888888877754456778888999999999 99999999999999999999999854 333335543
No 74
>2r55_A STAR-related lipid transfer protein 5; alpha and beta protein, cholesterol binding, structural GENO structural genomics consortium, SGC; 2.50A {Homo sapiens}
Probab=94.93 E-value=0.13 Score=43.32 Aligned_cols=64 Identities=13% Similarity=0.207 Sum_probs=50.1
Q ss_pred cCCceEEEEEEcCC-CcEEEEEEEEEcCCHHHHHHHH--hChhhhccccCCcceeEEEEecCCEEEE
Q 025783 103 HGDGVCIEIKKLGR-NSRRIRSKIEIDASLDTVWHIL--TDYEKLADFVPNLAVSQVVEKNDNFVRL 166 (248)
Q Consensus 103 ~~~~v~V~v~~l~~-~~r~V~asi~V~ap~e~Vw~vL--TDYEryPeFIP~~~~SrVLer~g~~vrv 166 (248)
..+++.|.-+..++ +...+.+...|++++++|+++| .|.+..++|.+.|.++++|+.-++...+
T Consensus 50 ~~~gv~v~~~~~~~~~~~~~k~~~~v~~~~~~v~~~l~~~d~~~r~~Wd~~~~~~~vle~i~~~~~i 116 (231)
T 2r55_A 50 EGNGVSVSWRPSVEFPGNLYRGEGIVYGTLEEVWDCVKPAVGGLRVKWDENVTGFEIIQSITDTLCV 116 (231)
T ss_dssp CCSSEEEEEEECSSSSSEEEEEEEEESSCHHHHHHHHCC--CCSHHHHCTTCSEEEEEEECSSSEEE
T ss_pred eCCCEEEEEEccCCCCCcEEEEEEEECCCHHHHHHHHHhhCcchhhhhccccceeEEEEEcCCCEEE
Confidence 46678887776533 3467888889999999999999 8999999999999999999986544433
No 75
>2lio_A Uncharacterized protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Bacteroides fragilis}
Probab=91.47 E-value=2.2 Score=34.32 Aligned_cols=94 Identities=20% Similarity=0.277 Sum_probs=57.7
Q ss_pred EEEEEEEEEcCCH-HHHHHHHhChhhhccccCCcceeEEEEecCCEEEEEEEeecceeeceEEEEeEEEEeeccccccCC
Q 025783 119 RRIRSKIEIDASL-DTVWHILTDYEKLADFVPNLAVSQVVEKNDNFVRLYQIGQQNLAFGIKFNAKGVLDCYEKDLEIFP 197 (248)
Q Consensus 119 r~V~asi~V~ap~-e~Vw~vLTDYEryPeFIP~~~~SrVLer~g~~vrv~QVG~~~i~fg~~FtarvvLdvtE~d~e~~P 197 (248)
.+|...+.|+||+ +.||++|++=+.+.+++..=.. ..|+..... .+.. ..+.++++- +. |
T Consensus 4 ~~i~~e~~i~A~~~~~VW~~IStPegL~~Wfad~v~-----~~g~~~~F~-w~~~-----~~~~~~v~~-~~-------~ 64 (136)
T 2lio_A 4 EKIHLEYLLNATSKNILWSAISTPTGLEDWFADKVV-----SDDKTVTFC-WGKT-----EQRQAGIVA-IR-------A 64 (136)
T ss_dssp EEEEEEEEECTTSCTHHHHGGGSHHHHTTTSSSEEE-----EETTEEEEE-SSSS-----SEEEEEEEE-EE-------T
T ss_pred CcEEEEEEecCChHHHHHHHhCChhhhhcccCCCCc-----ccCceEEEE-eCCC-----CcEeEEEEE-Ec-------C
Confidence 4788999999999 9999999999999999876422 344444331 1110 233444322 22 3
Q ss_pred CCCceEEEEEeecCCCC--ceeeeEEEEEcCCCeeEEEe
Q 025783 198 SGKKRDIEFKMIEGDFQ--LFEGKWSIEQVTYSCLQIIQ 234 (248)
Q Consensus 198 ~g~~rrI~f~lVeGDFK--~feG~W~fep~~~Gt~~vl~ 234 (248)
+++|.|+-.+-+-. .|+=+....+.++++...++
T Consensus 65 ---~~~i~FrW~~~~~~~~~~e~~l~~~~~t~~~~L~vt 100 (136)
T 2lio_A 65 ---YSFIRFHWLDDENERDYFEIKMSYNELTGDYVLEIT 100 (136)
T ss_dssp ---TTEEEEEESSSSSSSCEEEEEEEECTTTSCEEEEEE
T ss_pred ---CCEEEEEccCCCCCceEEEEEEEecCCCCcEEEEEe
Confidence 37999998753322 33333333334467766666
No 76
>2ffs_A Hypothetical protein PA1206; 7-stranded beta sheet, C-terminal helix, structural genomics protein structure initiative; HET: MSE; 2.50A {Pseudomonas aeruginosa} SCOP: d.129.3.7
Probab=89.38 E-value=6.5 Score=32.67 Aligned_cols=42 Identities=12% Similarity=0.150 Sum_probs=32.0
Q ss_pred CCHHHHHHH-HhChhhhccccCCcceeEEEEecCCEE-EEEEEe
Q 025783 129 ASLDTVWHI-LTDYEKLADFVPNLAVSQVVEKNDNFV-RLYQIG 170 (248)
Q Consensus 129 ap~e~Vw~v-LTDYEryPeFIP~~~~SrVLer~g~~v-rv~QVG 170 (248)
.+.+|+|+= +...++=-.|+|+|.+|+|+++.++.+ |-.+.|
T Consensus 20 LTr~QlW~GL~~kar~p~~Fvp~i~~c~Vlse~~~~~~R~l~fg 63 (157)
T 2ffs_A 20 LDRLQLWEGLVCRAREPQYFVVGLERFEILVDDGDRLHRRLYLP 63 (157)
T ss_dssp CCHHHHHHHHHHHHHCGGGTCTTCCEEEEEEECSSEEEEEEEET
T ss_pred cCHHHHHHHHHHHhcChhhcccccCeEEEEecCCCeEEEEEEEC
Confidence 457899975 556677778999999999999987754 435554
No 77
>1nz9_A Transcription antitermination protein NUSG; transcription elongation, riken structural genomics/proteomics initiative, RSGI; NMR {Thermus thermophilus} SCOP: b.34.5.4
Probab=25.68 E-value=97 Score=20.52 Aligned_cols=26 Identities=15% Similarity=0.279 Sum_probs=19.1
Q ss_pred EEEeecCCCCceeeeEEEEEcCCCee
Q 025783 205 EFKMIEGDFQLFEGKWSIEQVTYSCL 230 (248)
Q Consensus 205 ~f~lVeGDFK~feG~W~fep~~~Gt~ 230 (248)
..+.++|||+-++|...=-....+..
T Consensus 10 ~V~V~~Gpf~g~~g~v~~v~~~k~~v 35 (58)
T 1nz9_A 10 QVRVVSGPFADFTGTVTEINPERGKV 35 (58)
T ss_dssp EEEECSGGGTTCEEEEEEEETTTTEE
T ss_pred EEEEeecCCCCcEEEEEEEcCCCCEE
Confidence 56789999999999987554443433
Done!