Citrus Sinensis ID: 025786

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------25
Protein Sequence
MLNFGRARTQQRQTRPTSFGGLDYADPKRKSNFAGKFILAAALTALCIFLLKQSPTFSSPSPFSQHEEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVLQCHRF
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccEEEEcccccHHHHHHHHHHHHccccEEEEEccccccHHHHHHHHHHcccccccEEEEcccccHHHHHHHHHcccccEEEEccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEcccccccccccccccccccccccccccHHHHHHHHHHHHHHHHcccccEEEEEcc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccEEEEEccccHHHHHHHHHHHHcccEEEEEEccHHccccHHHHHHHHcccccccEEEEcccccHHHHHHHHHHccccEEEEccccccHHHHHHcHHHHHHHHHHHHHHHHHHHHHHcccEEEEEEEHHHHcccccccEccccccccccccHHHHHHHHHHHHHHHHcccccEEEEEEc
Coil and Loop (DISEMBL)
mlnfgrartqqrqtrptsfggldyadpkrksnfAGKFILAAALTALCIFLlkqsptfsspspfsqheegVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVdnlsrgnigAVKVLQelfpepgrlQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVgestldplkyyhnitsNTLVVLESMARhgvdtliysstcatygepekmpiteetpqapinpygkAKKMAEDIIldfsknsdmAVLQCHRF
Flexible Loop (DISEMBL)
mlnfgrartqqrqtrptsfggldyadPKRKSNFAGKFILAAALTALCIFLLKQSPTFSSPSPFSQHEEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPekmpiteetpqapiNPYGKAKKMAEDIILDFSKNSDMAVLQCHRF
Low Complexity Region (SEG)
MLNFGRArtqqrqtrptSFGGLDYADPKRKSNFAGKFILAAALTALCIFLLKQsptfsspspfsQHEEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVLQCHRF
Disordered region (IsUnstruct)
*******************************NFAGKFILAAALTALCIFLLKQ***************GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYG****************************IILDF**************
Disordered Region (DISOPRED)
************************A*PKRKSNFAGKFILAAALTALCIFLL********************HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVLQCHRF
Disordered Region (DISEMBL)
****************TSFGGLDYADPKRKSNFAGKFILAAALTALCIFLLKQSPTF**********EGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVLQCHRF
Disordered Region (DISPRO)
**********************DYADPKRKSNFAGKFILAAALTALCIFLLKQSPTFSSPSPFSQ**EGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVLQCHRF
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MLNFGRARTQQRQTRPTSFGGLDYADPKRKSNFAGKFILAAALTALCIFLLKQSPTFSSPSPFSQHEEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVLQCHRF
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	248	2.2.26 [Sep-21-2011]
Q9SA77	419	UDP-arabinose 4-epimerase	yes	no	1.0	0.591	0.830	1e-121
Q9SUN3	411	Probable UDP-arabinose 4-	no	no	0.995	0.600	0.814	1e-117
O64749	417	Putative UDP-arabinose 4-	no	no	0.995	0.592	0.818	1e-116
Q8H0B6	391	Probable UDP-arabinose 4-	yes	no	0.915	0.580	0.792	1e-104
Q8H0B2	406	Probable UDP-arabinose 4-	no	no	0.971	0.593	0.738	1e-103
Q8H930	421	Probable UDP-arabinose 4-	no	no	1.0	0.589	0.738	1e-102
Q9FI17	436	Putative UDP-arabinose 4-	no	no	1.0	0.568	0.702	9e-97
Q9SN58	351	UDP-glucose 4-epimerase 2	no	no	0.653	0.461	0.472	7e-36
P55180	339	UDP-glucose 4-epimerase O	yes	no	0.645	0.471	0.450	3e-35
Q9T0A7	350	UDP-glucose 4-epimerase 3	no	no	0.709	0.502	0.432	4e-35

>sp|Q9SA77|ARAE1_ARATH UDP-arabinose 4-epimerase 1 OS=Arabidopsis thaliana GN=MUR4 PE=1 SV=1

 Score =  434 bits (1115), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 206/248 (83%), Positives = 225/248 (90%)

Query: 1   MLNFGRARTQQRQTRPTSFGGLDYADPKRKSNFAGKFILAAALTALCIFLLKQSPTFSSP 60
           M +FGRAR+Q RQ R  S GGLDYADPK+K+N+ GK +L A+LTALCIF+LKQSPTF++P
Sbjct: 1   MFSFGRARSQGRQNRSMSLGGLDYADPKKKNNYLGKILLTASLTALCIFMLKQSPTFNTP 60

Query: 61  SPFSQHEEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPE 120
           S FS+HE GVTHVLVTGGAGYIGSHAALRLLK+SYRVTIVDNLSRGN+ AV++LQELFPE
Sbjct: 61  SVFSRHEPGVTHVLVTGGAGYIGSHAALRLLKESYRVTIVDNLSRGNLAAVRILQELFPE 120

Query: 121 PGRLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVL 180
           PGRLQFIYADLGDAKAVNK F+ENAFDAVMHFAAVAYVGEST  PLKYYHNITSNTLVVL
Sbjct: 121 PGRLQFIYADLGDAKAVNKIFTENAFDAVMHFAAVAYVGESTQFPLKYYHNITSNTLVVL 180

Query: 181 ESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDM 240
           E+MA HGV TLIYSSTCATYGEP+ MPITEETPQ PINPYGKAKKMAEDIILDFSKNSDM
Sbjct: 181 ETMAAHGVKTLIYSSTCATYGEPDIMPITEETPQVPINPYGKAKKMAEDIILDFSKNSDM 240

Query: 241 AVLQCHRF 248
           AV+    F
Sbjct: 241 AVMILRYF 248

Acts as a UDP-D-xylose 4-epimerase but lacks both UDP-D-glucose and UDP-D-glucuronic acid 4-epimerase activities in vitro.
Arabidopsis thaliana (taxid: 3702)
EC: 5EC: .EC: 1EC: .EC: 3EC: .EC: 5

>sp|Q9SUN3|ARAE3_ARATH Probable UDP-arabinose 4-epimerase 3 OS=Arabidopsis thaliana GN=At4g20460 PE=2 SV=3

 Score =  420 bits (1079), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 202/248 (81%), Positives = 221/248 (89%), Gaps = 1/248 (0%)

Query: 1   MLNFGRARTQQRQTRPTSFGGLDYADPKRKSNFAGKFILAAALTALCIFLLKQSPTFSSP 60
           ML+F RAR+Q R TRP   GG++Y +PKRKSN  GK IL  +LTALCIF+LK +P+F+SP
Sbjct: 1   MLSFSRARSQGRNTRPLG-GGMEYLEPKRKSNVMGKIILVVSLTALCIFMLKHAPSFTSP 59

Query: 61  SPFSQHEEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPE 120
           + FS+ EEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGN+GAVKVLQ LFPE
Sbjct: 60  TAFSRSEEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNLGAVKVLQGLFPE 119

Query: 121 PGRLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVL 180
           PGRLQFIYADLGDAKAV+K FSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVL
Sbjct: 120 PGRLQFIYADLGDAKAVDKIFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVL 179

Query: 181 ESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDM 240
           E++ARH V  LIYSSTCATYGEP+KMPI E TPQ PINPYGKAKKMAED+ILDFSKNSDM
Sbjct: 180 EAVARHKVKKLIYSSTCATYGEPDKMPIVEVTPQVPINPYGKAKKMAEDMILDFSKNSDM 239

Query: 241 AVLQCHRF 248
           AV+    F
Sbjct: 240 AVMILRYF 247

Arabidopsis thaliana (taxid: 3702)

EC: 5

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 5

>sp|O64749|ARAE2_ARATH Putative UDP-arabinose 4-epimerase 2 OS=Arabidopsis thaliana GN=At2g34850 PE=2 SV=3

 Score =  419 bits (1076), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 203/248 (81%), Positives = 218/248 (87%), Gaps = 1/248 (0%)

Query: 1   MLNFGRARTQQRQTRPTSFGGLDYADPKRKSNFAGKFILAAALTALCIFLLKQSPTFSSP 60
           MLN GRART  RQ R  SF GLD+ADPK+ +N+ GK +L   LTA+CI LL QSPTF++P
Sbjct: 1   MLNLGRARTG-RQNRSMSFEGLDFADPKKNNNYMGKIVLVMTLTAMCILLLNQSPTFNTP 59

Query: 61  SPFSQHEEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPE 120
           S FS+ E GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGN+GAVK+LQ+LFPE
Sbjct: 60  SVFSRSEPGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNLGAVKILQQLFPE 119

Query: 121 PGRLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVL 180
           PG+LQFIYADLGDA AVNK FSENAFDAVMHFAAVAYVGEST  PLKYYHNITSNTLVVL
Sbjct: 120 PGKLQFIYADLGDANAVNKIFSENAFDAVMHFAAVAYVGESTQFPLKYYHNITSNTLVVL 179

Query: 181 ESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDM 240
           E+MA HGV TLIYSSTCATYGEPEKMPITEETPQ PINPYGKAKKMAEDIILDFSKNS M
Sbjct: 180 ETMAAHGVKTLIYSSTCATYGEPEKMPITEETPQVPINPYGKAKKMAEDIILDFSKNSIM 239

Query: 241 AVLQCHRF 248
           AV+    F
Sbjct: 240 AVMILRYF 247

Arabidopsis thaliana (taxid: 3702)

EC: 5

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 5

>sp|Q8H0B6|ARAE2_ORYSJ Probable UDP-arabinose 4-epimerase 2 OS=Oryza sativa subsp. japonica GN=UEL-2 PE=2 SV=1

 Score =  377 bits (969), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 180/227 (79%), Positives = 199/227 (87%)

Query: 22  LDYADPKRKSNFAGKFILAAALTALCIFLLKQSPTFSSPSPFSQHEEGVTHVLVTGGAGY 81
           +D+ D +RK N  GKF +A ALT +CI +LKQSP F+S S FS+HE GVTHVLVTGGAGY
Sbjct: 1   MDFGDSRRKPNVVGKFTVAVALTVMCIIVLKQSPGFTSTSVFSRHEIGVTHVLVTGGAGY 60

Query: 82  IGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFF 141
           IGSHA LRLL+D+YRVTIVDNLSRGN+GAV+VLQ LFPEPGRLQFIYADLGDAKAVNK F
Sbjct: 61  IGSHATLRLLRDNYRVTIVDNLSRGNMGAVRVLQRLFPEPGRLQFIYADLGDAKAVNKIF 120

Query: 142 SENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYG 201
           SENAFDAVMHFAAVAYVGESTL+PL+YYHNITSNTL VLE+MA + V TLIYSSTCATYG
Sbjct: 121 SENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLTVLEAMAAYNVKTLIYSSTCATYG 180

Query: 202 EPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVLQCHRF 248
           EP+ MPITE TPQ PINPYGKAKKMAEDIILDFSK S+MAV+    F
Sbjct: 181 EPDTMPITEATPQNPINPYGKAKKMAEDIILDFSKRSEMAVMILRYF 227

Oryza sativa subsp. japonica (taxid: 39947)

EC: 5

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 5

>sp|Q8H0B2|ARAE3_ORYSJ Probable UDP-arabinose 4-epimerase 3 OS=Oryza sativa subsp. japonica GN=UEL-3 PE=2 SV=1

 Score =  374 bits (959), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 184/249 (73%), Positives = 204/249 (81%), Gaps = 8/249 (3%)

Query: 1   MLNFGRARTQQRQTRPTSFGGLDYADPKRKSNFAGKFILAAALTALCIFLLKQSPTFSSP 60
           M+   R  +Q R       GG++Y D +RK +  GK I A  LT LCIF+LKQSP F   
Sbjct: 1   MIPLNRRASQTR-------GGMEYFDARRKPHNVGKVIAALVLTTLCIFILKQSPGFGGS 53

Query: 61  SPFSQHEEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPE 120
           S FS+HE GVTHVLVTGGAGYIGSHA+LRLLKD+YRVTIVDNLSRGN+GAVKVLQELFP+
Sbjct: 54  SVFSRHEPGVTHVLVTGGAGYIGSHASLRLLKDNYRVTIVDNLSRGNMGAVKVLQELFPQ 113

Query: 121 PGRLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVL 180
           PGRLQFIYADLGD K VNK F+ENAFDAVMHFAAVAYVGESTL+PL+YYHNITSNTL++L
Sbjct: 114 PGRLQFIYADLGDQKTVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLLIL 173

Query: 181 ESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKN-SD 239
           E+MA HGV TLIYSSTCATYGEPEKMPI E T Q PINPYGKAKKMAEDIILDF+K   D
Sbjct: 174 EAMASHGVKTLIYSSTCATYGEPEKMPIVETTRQLPINPYGKAKKMAEDIILDFTKGRKD 233

Query: 240 MAVLQCHRF 248
           MAV+    F
Sbjct: 234 MAVMILRYF 242

Oryza sativa subsp. japonica (taxid: 39947)

EC: 5

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 5

>sp|Q8H930|ARAE1_ORYSJ Probable UDP-arabinose 4-epimerase 1 OS=Oryza sativa subsp. japonica GN=UEL-1 PE=2 SV=2

 Score =  371 bits (953), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 186/252 (73%), Positives = 207/252 (82%), Gaps = 4/252 (1%)

Query: 1   MLNFGRARTQQRQTRPTSF-GGLDYADPKRKSNFAGKFILAAALTALCIFLLKQSPTFS- 58
           ML   R R QQR  R   F   +D++DPKRK  +  K ++ A LTA+C+ +L Q P    
Sbjct: 1   MLPTNRNRPQQRPARSWYFISDMDFSDPKRKPRYLSKILMVALLTAMCVVMLTQPPCHRR 60

Query: 59  SPSPFSQHEEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELF 118
           +PS FS HE GVTHVLVTGGAGYIGSHAALRLLKDS+RVTIVDNLSRGN+GA+KVLQ LF
Sbjct: 61  TPSVFSIHEPGVTHVLVTGGAGYIGSHAALRLLKDSFRVTIVDNLSRGNMGAIKVLQNLF 120

Query: 119 PEPGRLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLV 178
            EPGRLQFIYADLGD KAVN+ F+ENAFDAVMHFAAVAYVGESTL+PL+YYHNITSNTLV
Sbjct: 121 SEPGRLQFIYADLGDPKAVNRIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLV 180

Query: 179 VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKN- 237
           VLE+MA H V TLIYSSTCATYGEPEKMPITE TPQ PINPYGKAKKMAEDIILDFSK+ 
Sbjct: 181 VLEAMAAHNVRTLIYSSTCATYGEPEKMPITEGTPQFPINPYGKAKKMAEDIILDFSKSK 240

Query: 238 -SDMAVLQCHRF 248
            +DMAV+    F
Sbjct: 241 KADMAVMILRYF 252

Oryza sativa subsp. japonica (taxid: 39947)

EC: 5

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 5

>sp|Q9FI17|ARAE4_ARATH Putative UDP-arabinose 4-epimerase 4 OS=Arabidopsis thaliana GN=At5g44480 PE=3 SV=1

 Score =  353 bits (905), Expect = 9e-97,   Method: Compositional matrix adjust.
 Identities = 191/272 (70%), Positives = 209/272 (76%), Gaps = 24/272 (8%)

Query: 1   MLNFGRARTQQRQTRPTSFGG------------------------LDYADPKRKSNFAGK 36
           MLN    RTQ+R  RP S GG                        +D  +PK K+N  GK
Sbjct: 1   MLNSSGVRTQRRSPRPLSLGGRKIITPTKFAYDHHNPDKVLDFVEMDCLEPKTKNNLTGK 60

Query: 37  FILAAALTALCIFLLKQSPTFSSPSPFSQHEEGVTHVLVTGGAGYIGSHAALRLLKDSYR 96
            +L A+L  L I ++ QS +F+SPS FSQ EEGVTHVLVTGGAGYIGSHAALRLL+DSYR
Sbjct: 61  LLLVASLLILAIIVISQSSSFTSPSAFSQREEGVTHVLVTGGAGYIGSHAALRLLRDSYR 120

Query: 97  VTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVA 156
           VTIVDNLSRGN+GAVK LQ+LFP+ GRLQFIYADLGD  AV K FSENAFDAVMHFAAVA
Sbjct: 121 VTIVDNLSRGNLGAVKTLQQLFPQTGRLQFIYADLGDPLAVEKIFSENAFDAVMHFAAVA 180

Query: 157 YVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP 216
           YVGESTL PLKYYHNITSNTL VLE+MARH V  LIYSSTCATYGEPEKMPITE+TPQ P
Sbjct: 181 YVGESTLYPLKYYHNITSNTLGVLEAMARHKVKKLIYSSTCATYGEPEKMPITEDTPQVP 240

Query: 217 INPYGKAKKMAEDIILDFSKNSDMAVLQCHRF 248
           INPYGKAKKMAED+ILDFSKNSDMAV+    F
Sbjct: 241 INPYGKAKKMAEDMILDFSKNSDMAVMILRYF 272

Arabidopsis thaliana (taxid: 3702)

EC: 5

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 5

>sp|Q9SN58|GALE2_ARATH UDP-glucose 4-epimerase 2 OS=Arabidopsis thaliana GN=At4g10960 PE=2 SV=3

 Score =  150 bits (380), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 77/163 (47%), Positives = 105/163 (64%), Gaps = 1/163 (0%)

Query: 72  HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPG-RLQFIYAD 130
           +VLV+GGAGYIGSH  L+LL   Y V +VDNL   +  +++ +++L  E G RL F   D
Sbjct: 5   NVLVSGGAGYIGSHTVLQLLLGGYSVVVVDNLDNSSAVSLQRVKKLAAEHGERLSFHQVD 64

Query: 131 LGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDT 190
           L D  A+ K FSE  FDAV+HFA +  VGES   PL YY+N    T+ +LE MA+HG   
Sbjct: 65  LRDRSALEKIFSETKFDAVIHFAGLKAVGESVEKPLLYYNNNLVGTITLLEVMAQHGCKN 124

Query: 191 LIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILD 233
           L++SS+   YG P+++P TEE P + +NPYG+ K   E+I  D
Sbjct: 125 LVFSSSATVYGSPKEVPCTEEFPISALNPYGRTKLFIEEICRD 167

Arabidopsis thaliana (taxid: 3702)

EC: 5

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 2

>sp|P55180|GALE_BACSU UDP-glucose 4-epimerase OS=Bacillus subtilis (strain 168) GN=galE PE=3 SV=1

 Score =  149 bits (375), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 73/162 (45%), Positives = 103/162 (63%), Gaps = 2/162 (1%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           +LVTGGAGYIGSH  + LL   Y + ++DNLS  +  A+  ++E+  +   L F  ADL 
Sbjct: 3   ILVTGGAGYIGSHTCVELLNSGYEIVVLDNLSNSSAEALNRVKEITGK--DLTFYEADLL 60

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
           D +AV+  F+EN  +AV+HFA +  VGES   PLKYYHN  + T ++ E+M ++GV  ++
Sbjct: 61  DREAVDSVFAENEIEAVIHFAGLKAVGESVAIPLKYYHNNLTGTFILCEAMEKYGVKKIV 120

Query: 193 YSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDF 234
           +SS+   YG PE  PITE+ P    NPYG+ K M E I+ D 
Sbjct: 121 FSSSATVYGVPETSPITEDFPLGATNPYGQTKLMLEQILRDL 162

Bacillus subtilis (strain 168) (taxid: 224308)

EC: 5

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 2

>sp|Q9T0A7|GALE3_ARATH UDP-glucose 4-epimerase 3 OS=Arabidopsis thaliana GN=At4g23920 PE=2 SV=1

 Score =  148 bits (373), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 77/178 (43%), Positives = 110/178 (61%), Gaps = 2/178 (1%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPG-RLQFIYADL 131
           VLVTGGAGYIGSH  L+LL+  Y   +VDN    +  +++ +++L  E G RL F   DL
Sbjct: 5   VLVTGGAGYIGSHTVLQLLEGGYSAVVVDNYDNSSAASLQRVKKLAGENGNRLSFHQVDL 64

Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTL 191
            D  A+ K FSE  FDAV+HFA +  VGES   PL YY+N    T+ +LE MA++G   L
Sbjct: 65  RDRPALEKIFSETKFDAVIHFAGLKAVGESVEKPLLYYNNNIVGTVTLLEVMAQYGCKNL 124

Query: 192 IYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSK-NSDMAVLQCHRF 248
           ++SS+   YG P+++P TEE+P +  NPYG+ K   E+I  D  + +S+  ++    F
Sbjct: 125 VFSSSATVYGWPKEVPCTEESPISATNPYGRTKLFIEEICRDVHRSDSEWKIILLRYF 182

Arabidopsis thaliana (taxid: 3702)

EC: 5

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 2

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	248
255578061	417	UDP-glucose 4-epimerase, putative [Ricin	1.0	0.594	0.850	1e-121
297846004	418	hypothetical protein ARALYDRAFT_890616 [	1.0	0.593	0.838	1e-121
449435556	417	PREDICTED: UDP-arabinose 4-epimerase 1-l	1.0	0.594	0.842	1e-120
225444161	418	PREDICTED: UDP-arabinose 4-epimerase 1 [	1.0	0.593	0.830	1e-119
22329866	419	UDP-arabinose 4-epimerase [Arabidopsis t	1.0	0.591	0.830	1e-119
24417398	419	unknown [Arabidopsis thaliana]	1.0	0.591	0.826	1e-118
224117864	417	predicted protein [Populus trichocarpa]	1.0	0.594	0.830	1e-118
145324086	418	UDP-arabinose 4-epimerase [Arabidopsis t	0.995	0.590	0.830	1e-118
211906524	413	UDP-D-xylose 4-epimerase [Gossypium hirs	1.0	0.600	0.818	1e-117
449490631	412	PREDICTED: LOW QUALITY PROTEIN: UDP-arab	1.0	0.601	0.814	1e-116

>gi|255578061|ref|XP_002529901.1| UDP-glucose 4-epimerase, putative [Ricinus communis] gi|223530628|gb|EEF32504.1| UDP-glucose 4-epimerase, putative [Ricinus communis]

 Score =  441 bits (1135), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 211/248 (85%), Positives = 223/248 (89%)

Query: 1   MLNFGRARTQQRQTRPTSFGGLDYADPKRKSNFAGKFILAAALTALCIFLLKQSPTFSSP 60
           MLNFGRAR QQR  R     GLDYADPKRKSN  GK ILAAALTALCI +LKQSPTF++P
Sbjct: 1   MLNFGRARNQQRTNRSMPLAGLDYADPKRKSNVVGKIILAAALTALCIIMLKQSPTFNTP 60

Query: 61  SPFSQHEEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPE 120
           SPFS HE+GV HVLVTGGAGYIGSHA+LRLLKD YRVTIVDNLSRGN+GAVKVLQELFPE
Sbjct: 61  SPFSLHEDGVVHVLVTGGAGYIGSHASLRLLKDGYRVTIVDNLSRGNLGAVKVLQELFPE 120

Query: 121 PGRLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVL 180
           PGRLQFIYADLG++K+VNK FSENAFDAVMHFAAVAYVGEST+DPLKYYHNITSNTLVVL
Sbjct: 121 PGRLQFIYADLGNSKSVNKIFSENAFDAVMHFAAVAYVGESTMDPLKYYHNITSNTLVVL 180

Query: 181 ESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDM 240
           ESMA H V TLIYSSTCATYGEPEKMPITE+T Q PINPYGKAKKMAEDIILDFSKNSDM
Sbjct: 181 ESMAAHDVKTLIYSSTCATYGEPEKMPITEDTAQVPINPYGKAKKMAEDIILDFSKNSDM 240

Query: 241 AVLQCHRF 248
           AV+    F
Sbjct: 241 AVMILRYF 248

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297846004|ref|XP_002890883.1| hypothetical protein ARALYDRAFT_890616 [Arabidopsis lyrata subsp. lyrata] gi|297336725|gb|EFH67142.1| hypothetical protein ARALYDRAFT_890616 [Arabidopsis lyrata subsp. lyrata]

 Score =  438 bits (1127), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 208/248 (83%), Positives = 226/248 (91%)

Query: 1   MLNFGRARTQQRQTRPTSFGGLDYADPKRKSNFAGKFILAAALTALCIFLLKQSPTFSSP 60
           M NFGRAR+Q RQ R  S GGLDYADPK+K+N+ GK +L A+LTALCIF+LKQSPTF++P
Sbjct: 1   MFNFGRARSQGRQNRSMSLGGLDYADPKKKNNYLGKILLTASLTALCIFMLKQSPTFNTP 60

Query: 61  SPFSQHEEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPE 120
           S FS+HE GVTHVLVTGGAGYIGSHAALRLLK+SYRVTIVDNLSRGN+GAVK+LQELFPE
Sbjct: 61  SVFSRHEPGVTHVLVTGGAGYIGSHAALRLLKESYRVTIVDNLSRGNLGAVKILQELFPE 120

Query: 121 PGRLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVL 180
           PGRLQFIYADLGDAKAVNK F+ENAFDAVMHFAAVAYVGEST  PLKYYHNITSNTLVVL
Sbjct: 121 PGRLQFIYADLGDAKAVNKIFTENAFDAVMHFAAVAYVGESTQFPLKYYHNITSNTLVVL 180

Query: 181 ESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDM 240
           E+MA HGV TLIYSSTCATYGEP+ MPITEETPQ PINPYGKAKKMAEDIILDFSKNS+M
Sbjct: 181 ETMAAHGVKTLIYSSTCATYGEPDTMPITEETPQVPINPYGKAKKMAEDIILDFSKNSNM 240

Query: 241 AVLQCHRF 248
           AV+    F
Sbjct: 241 AVMILRYF 248

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449435556|ref|XP_004135561.1| PREDICTED: UDP-arabinose 4-epimerase 1-like [Cucumis sativus]

 Score =  436 bits (1122), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 209/248 (84%), Positives = 224/248 (90%)

Query: 1   MLNFGRARTQQRQTRPTSFGGLDYADPKRKSNFAGKFILAAALTALCIFLLKQSPTFSSP 60
           ML+FGR+R Q R  R  SFGG+DY DPKRK+NF GK ILAA+LTA+CI +LKQSP FS+P
Sbjct: 1   MLSFGRSRNQSRFGRSVSFGGMDYPDPKRKNNFVGKIILAASLTAICIVMLKQSPNFSTP 60

Query: 61  SPFSQHEEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPE 120
           +PF+ H+ GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGN+GAVKVLQELFPE
Sbjct: 61  TPFASHQLGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNLGAVKVLQELFPE 120

Query: 121 PGRLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVL 180
            GRLQFIYADLGDAK+VNK FSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTL VL
Sbjct: 121 YGRLQFIYADLGDAKSVNKIFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLTVL 180

Query: 181 ESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDM 240
           ESMA HGV TLIYSSTCATYGEPEKMPITEET QAPINPYGKAKKMAE+IILDFSKNS M
Sbjct: 181 ESMAAHGVKTLIYSSTCATYGEPEKMPITEETSQAPINPYGKAKKMAEEIILDFSKNSKM 240

Query: 241 AVLQCHRF 248
           AV+    F
Sbjct: 241 AVMILRYF 248

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225444161|ref|XP_002270765.1| PREDICTED: UDP-arabinose 4-epimerase 1 [Vitis vinifera] gi|297740899|emb|CBI31081.3| unnamed protein product [Vitis vinifera]

 Score =  435 bits (1118), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 206/248 (83%), Positives = 225/248 (90%)

Query: 1   MLNFGRARTQQRQTRPTSFGGLDYADPKRKSNFAGKFILAAALTALCIFLLKQSPTFSSP 60
           MLNF R+R Q R +R   FGG++YADPKRKSN  GK +LAA LTALCI +LKQS  F++P
Sbjct: 1   MLNFTRSRNQPRPSRSMPFGGMEYADPKRKSNVVGKILLAATLTALCILMLKQSSNFNTP 60

Query: 61  SPFSQHEEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPE 120
           SPFS+HE GVTHVLVTGGAGYIGSHAALRLLKDS+RVTIVDNLSRGN+GA+KVLQE FPE
Sbjct: 61  SPFSRHEPGVTHVLVTGGAGYIGSHAALRLLKDSHRVTIVDNLSRGNLGAIKVLQEQFPE 120

Query: 121 PGRLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVL 180
           PGRLQFIYADLGDAKAVNK FSENAFDAVMHFAAVAYVGESTL+PL+YYHNITSNTLVVL
Sbjct: 121 PGRLQFIYADLGDAKAVNKIFSENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVVL 180

Query: 181 ESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDM 240
           E+MA HGV+TLIYSSTCATYGEPEKMPITE+TPQ PINPYGKAKKMAEDIILDFSKNS+M
Sbjct: 181 EAMAAHGVNTLIYSSTCATYGEPEKMPITEQTPQVPINPYGKAKKMAEDIILDFSKNSEM 240

Query: 241 AVLQCHRF 248
           AV+    F
Sbjct: 241 AVMILRYF 248

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|22329866|ref|NP_174350.2| UDP-arabinose 4-epimerase [Arabidopsis thaliana] gi|79318985|ref|NP_001031118.1| UDP-arabinose 4-epimerase [Arabidopsis thaliana] gi|75313130|sp|Q9SA77.1|ARAE1_ARATH RecName: Full=UDP-arabinose 4-epimerase 1; AltName: Full=UDP-D-xylose 4-epimerase 1 gi|4587518|gb|AAD25749.1|AC007060_7 Strong similarity to F19I3.8 gi|3033381 putative UDP-galactose-4-epimerase from Arabidopsis thaliana BAC gb|AC004238 and is a member of PF|01370 the NAD dependent epimerase/dehydratase family. EST gb|AA597338 comes from this gene [Arabidopsis thaliana] gi|13272475|gb|AAK17176.1|AF325108_1 unknown protein [Arabidopsis thaliana] gi|18086329|gb|AAL57628.1| At1g30620/T5I8_7 [Arabidopsis thaliana] gi|27363222|gb|AAO11530.1| At1g30620/T5I8_7 [Arabidopsis thaliana] gi|28395529|gb|AAO39213.1| UDP-D-xylose 4-epimerase [Arabidopsis thaliana] gi|222423784|dbj|BAH19858.1| AT1G30620 [Arabidopsis thaliana] gi|332193130|gb|AEE31251.1| UDP-arabinose 4-epimerase [Arabidopsis thaliana] gi|332193131|gb|AEE31252.1| UDP-arabinose 4-epimerase [Arabidopsis thaliana]

 Score =  434 bits (1115), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 206/248 (83%), Positives = 225/248 (90%)

Query: 1   MLNFGRARTQQRQTRPTSFGGLDYADPKRKSNFAGKFILAAALTALCIFLLKQSPTFSSP 60
           M +FGRAR+Q RQ R  S GGLDYADPK+K+N+ GK +L A+LTALCIF+LKQSPTF++P
Sbjct: 1   MFSFGRARSQGRQNRSMSLGGLDYADPKKKNNYLGKILLTASLTALCIFMLKQSPTFNTP 60

Query: 61  SPFSQHEEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPE 120
           S FS+HE GVTHVLVTGGAGYIGSHAALRLLK+SYRVTIVDNLSRGN+ AV++LQELFPE
Sbjct: 61  SVFSRHEPGVTHVLVTGGAGYIGSHAALRLLKESYRVTIVDNLSRGNLAAVRILQELFPE 120

Query: 121 PGRLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVL 180
           PGRLQFIYADLGDAKAVNK F+ENAFDAVMHFAAVAYVGEST  PLKYYHNITSNTLVVL
Sbjct: 121 PGRLQFIYADLGDAKAVNKIFTENAFDAVMHFAAVAYVGESTQFPLKYYHNITSNTLVVL 180

Query: 181 ESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDM 240
           E+MA HGV TLIYSSTCATYGEP+ MPITEETPQ PINPYGKAKKMAEDIILDFSKNSDM
Sbjct: 181 ETMAAHGVKTLIYSSTCATYGEPDIMPITEETPQVPINPYGKAKKMAEDIILDFSKNSDM 240

Query: 241 AVLQCHRF 248
           AV+    F
Sbjct: 241 AVMILRYF 248

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|24417398|gb|AAN60309.1| unknown [Arabidopsis thaliana]

 Score =  431 bits (1107), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 205/248 (82%), Positives = 224/248 (90%)

Query: 1   MLNFGRARTQQRQTRPTSFGGLDYADPKRKSNFAGKFILAAALTALCIFLLKQSPTFSSP 60
           M +FGRAR+Q RQ R  S GGLDYADPK+K+N+ GK +L A+LTALCIF+LKQSPTF++P
Sbjct: 1   MFSFGRARSQGRQNRSMSLGGLDYADPKKKNNYLGKILLTASLTALCIFMLKQSPTFNTP 60

Query: 61  SPFSQHEEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPE 120
           S FS+HE GVTHVLVTGGAGYIGSHAALRLLK+SYRVTIVDNLSRGN+ AV++LQELFPE
Sbjct: 61  SVFSRHEPGVTHVLVTGGAGYIGSHAALRLLKESYRVTIVDNLSRGNLAAVRILQELFPE 120

Query: 121 PGRLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVL 180
           PGRLQFIYADLGDAKAVNK F+ENAFDAVMHFAA AYVGEST  PLKYYHNITSNTLVVL
Sbjct: 121 PGRLQFIYADLGDAKAVNKIFTENAFDAVMHFAAGAYVGESTQFPLKYYHNITSNTLVVL 180

Query: 181 ESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDM 240
           E+MA HGV TLIYSSTCATYGEP+ MPITEETPQ PINPYGKAKKMAEDIILDFSKNSDM
Sbjct: 181 ETMAAHGVKTLIYSSTCATYGEPDIMPITEETPQVPINPYGKAKKMAEDIILDFSKNSDM 240

Query: 241 AVLQCHRF 248
           AV+    F
Sbjct: 241 AVMILRYF 248

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224117864|ref|XP_002317687.1| predicted protein [Populus trichocarpa] gi|222860752|gb|EEE98299.1| predicted protein [Populus trichocarpa]

 Score =  431 bits (1107), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 206/248 (83%), Positives = 218/248 (87%)

Query: 1   MLNFGRARTQQRQTRPTSFGGLDYADPKRKSNFAGKFILAAALTALCIFLLKQSPTFSSP 60
           MLNFGR R Q R  R  S GG+DY+DPKRK+N  GK +LAA LTALCI +LKQSPTF SP
Sbjct: 1   MLNFGRTRAQTRSNRSISLGGMDYSDPKRKNNVVGKILLAATLTALCIIMLKQSPTFYSP 60

Query: 61  SPFSQHEEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPE 120
           SPFS HEEGV HVLVTGGAGYIGSHAALRLLKD YRVTIVDNLSRGNIGAVKVLQELFPE
Sbjct: 61  SPFSLHEEGVIHVLVTGGAGYIGSHAALRLLKDGYRVTIVDNLSRGNIGAVKVLQELFPE 120

Query: 121 PGRLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVL 180
           PGRLQFIYADLGD K VN  FS+NAFDAVMHFAAVAYVGEST++PLKYYHNITSNTLVVL
Sbjct: 121 PGRLQFIYADLGDPKTVNIIFSQNAFDAVMHFAAVAYVGESTMEPLKYYHNITSNTLVVL 180

Query: 181 ESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDM 240
           E+MA + V TLIYSSTCATYGEPEKMPITE TPQ PINPYGKAKKMAEDIILDFSKNSDM
Sbjct: 181 EAMAANDVKTLIYSSTCATYGEPEKMPITEVTPQVPINPYGKAKKMAEDIILDFSKNSDM 240

Query: 241 AVLQCHRF 248
           A++    F
Sbjct: 241 AIMILRYF 248

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|145324086|ref|NP_001077632.1| UDP-arabinose 4-epimerase [Arabidopsis thaliana] gi|332193132|gb|AEE31253.1| UDP-arabinose 4-epimerase [Arabidopsis thaliana]

 Score =  430 bits (1105), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 206/248 (83%), Positives = 225/248 (90%), Gaps = 1/248 (0%)

Query: 1   MLNFGRARTQQRQTRPTSFGGLDYADPKRKSNFAGKFILAAALTALCIFLLKQSPTFSSP 60
           M +FGRAR+Q RQ R  S GGLDYADPK+K+N+ GK +L A+LTALCIF+LKQSPTF++P
Sbjct: 1   MFSFGRARSQGRQNRSMSLGGLDYADPKKKNNYLGKILLTASLTALCIFMLKQSPTFNTP 60

Query: 61  SPFSQHEEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPE 120
           S FS+HE GVTHVLVTGGAGYIGSHAALRLLK+SYRVTIVDNLSRGN+ AV++LQELFPE
Sbjct: 61  S-FSRHEPGVTHVLVTGGAGYIGSHAALRLLKESYRVTIVDNLSRGNLAAVRILQELFPE 119

Query: 121 PGRLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVL 180
           PGRLQFIYADLGDAKAVNK F+ENAFDAVMHFAAVAYVGEST  PLKYYHNITSNTLVVL
Sbjct: 120 PGRLQFIYADLGDAKAVNKIFTENAFDAVMHFAAVAYVGESTQFPLKYYHNITSNTLVVL 179

Query: 181 ESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDM 240
           E+MA HGV TLIYSSTCATYGEP+ MPITEETPQ PINPYGKAKKMAEDIILDFSKNSDM
Sbjct: 180 ETMAAHGVKTLIYSSTCATYGEPDIMPITEETPQVPINPYGKAKKMAEDIILDFSKNSDM 239

Query: 241 AVLQCHRF 248
           AV+    F
Sbjct: 240 AVMILRYF 247

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|211906524|gb|ACJ11755.1| UDP-D-xylose 4-epimerase [Gossypium hirsutum]

 Score =  427 bits (1099), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 203/248 (81%), Positives = 220/248 (88%)

Query: 1   MLNFGRARTQQRQTRPTSFGGLDYADPKRKSNFAGKFILAAALTALCIFLLKQSPTFSSP 60
           MLNF R R+Q R TR     G++Y DPKRKSNF GK ++AA LTALCI +LKQSP F++ 
Sbjct: 1   MLNFARGRSQPRSTRSMPLSGMEYPDPKRKSNFVGKILMAATLTALCIIMLKQSPNFNTR 60

Query: 61  SPFSQHEEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPE 120
           S FS+HEEGV HVLVTGGAGYIGSHAALRLLK+SYRVTIVDNLSRGN+GAVKVLQ+LFPE
Sbjct: 61  SRFSEHEEGVIHVLVTGGAGYIGSHAALRLLKESYRVTIVDNLSRGNMGAVKVLQKLFPE 120

Query: 121 PGRLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVL 180
           PG+LQF+YADLGD KAVNK FSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLV+L
Sbjct: 121 PGQLQFVYADLGDLKAVNKIFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVIL 180

Query: 181 ESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDM 240
           ESMA H V TLIYSSTCATYGEPEKMPITEETPQ PINPYGKAKKMAEDIILD+SKNSDM
Sbjct: 181 ESMAAHDVRTLIYSSTCATYGEPEKMPITEETPQVPINPYGKAKKMAEDIILDYSKNSDM 240

Query: 241 AVLQCHRF 248
           AV+    F
Sbjct: 241 AVMILRYF 248

Source: Gossypium hirsutum

Species: Gossypium hirsutum

Genus: Gossypium

Family: Malvaceae

Order: Malvales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449490631|ref|XP_004158661.1| PREDICTED: LOW QUALITY PROTEIN: UDP-arabinose 4-epimerase 1-like [Cucumis sativus]

 Score =  423 bits (1087), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 202/248 (81%), Positives = 216/248 (87%)

Query: 1   MLNFGRARTQQRQTRPTSFGGLDYADPKRKSNFAGKFILAAALTALCIFLLKQSPTFSSP 60
           MLNFGR+RTQ R  R  S GG+DY+DPKRK N  GKFILAA LTALCI +LKQSP FS+P
Sbjct: 1   MLNFGRSRTQPRSNRSLSLGGMDYSDPKRKXNVVGKFILAATLTALCIIMLKQSPAFSAP 60

Query: 61  SPFSQHEEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPE 120
           S F   E GVTHVLVTGGAGYIGSHA LRLLKD+YRVTIVDNLSRGN+GAV+VLQELFPE
Sbjct: 61  SQFGVREPGVTHVLVTGGAGYIGSHATLRLLKDNYRVTIVDNLSRGNLGAVRVLQELFPE 120

Query: 121 PGRLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVL 180
           PGRLQFIYADLGD KAVNK FSENAFDAVMHFAAVAYVGEST+DPLKYYHNITSNTL ++
Sbjct: 121 PGRLQFIYADLGDPKAVNKIFSENAFDAVMHFAAVAYVGESTVDPLKYYHNITSNTLTLI 180

Query: 181 ESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDM 240
           E+MA H V  LIYSSTCATYGEP+KMPITEETPQ PINPYGKAKKMAEDII DFSKNS M
Sbjct: 181 EAMAAHRVKKLIYSSTCATYGEPDKMPITEETPQVPINPYGKAKKMAEDIIKDFSKNSKM 240

Query: 241 AVLQCHRF 248
           AV+    F
Sbjct: 241 AVMILRYF 248

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	248
TAIR|locus:2204639	419	MUR4 "MURUS 4" [Arabidopsis th	0.979	0.579	0.790	5.6e-100
TAIR|locus:2163401	436	DUR "DEFECTIVE UGE IN ROOT" [A	0.907	0.516	0.764	5.3e-88
TAIR|locus:2123466	351	UGE5 "UDP-D-glucose/UDP-D-gala	0.653	0.461	0.472	3.1e-35
TAIR|locus:2138121	350	UGE2 "UDP-D-glucose/UDP-D-gala	0.709	0.502	0.432	3.6e-34
TAIR|locus:2014235	348	RHD1 "ROOT HAIR DEFECTIVE 1" [	0.673	0.479	0.434	4.6e-34
TIGR_CMR|CJE_1273	328	CJE_1273 "UDP-glucose 4-epimer	0.641	0.484	0.441	3.2e-33
TIGR_CMR|BA_5700	338	BA_5700 "UDP-glucose 4-epimera	0.665	0.488	0.407	3.7e-32
TIGR_CMR|SO_1664	337	SO_1664 "UDP-glucose 4-epimera	0.661	0.486	0.407	1.4e-30
TAIR|locus:2010371	351	UGE1 "UDP-D-glucose/UDP-D-gala	0.665	0.470	0.401	1.4e-30
DICTYBASE|DDB_G0275295	344	galE "UDP-glucose 4-epimerase"	0.641	0.462	0.403	1.8e-30

TAIR|locus:2204639 MUR4 "MURUS 4" [Arabidopsis thaliana (taxid:3702)]

 Score = 992 (354.3 bits), Expect = 5.6e-100, P = 5.6e-100
 Identities = 192/243 (79%), Positives = 208/243 (85%)

Query:     1 MLNFGRAXXXXXXXXXXSFGGLDYADPKRKSNFAGKFILAAALTALCIFLLKQXXXXXXX 60
             M +FGRA          S GGLDYADPK+K+N+ GK +L A+LTALCIF+LKQ       
Sbjct:     1 MFSFGRARSQGRQNRSMSLGGLDYADPKKKNNYLGKILLTASLTALCIFMLKQSPTFNTP 60

Query:    61 XXXXQHEEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPE 120
                 +HE GVTHVLVTGGAGYIGSHAALRLLK+SYRVTIVDNLSRGN+ AV++LQELFPE
Sbjct:    61 SVFSRHEPGVTHVLVTGGAGYIGSHAALRLLKESYRVTIVDNLSRGNLAAVRILQELFPE 120

Query:   121 PGRLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVL 180
             PGRLQFIYADLGDAKAVNK F+ENAFDAVMHFAAVAYVGEST  PLKYYHNITSNTLVVL
Sbjct:   121 PGRLQFIYADLGDAKAVNKIFTENAFDAVMHFAAVAYVGESTQFPLKYYHNITSNTLVVL 180

Query:   181 ESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDM 240
             E+MA HGV TLIYSSTCATYGEP+ MPITEETPQ PINPYGKAKKMAEDIILDFSKNSDM
Sbjct:   181 ETMAAHGVKTLIYSSTCATYGEPDIMPITEETPQVPINPYGKAKKMAEDIILDFSKNSDM 240

Query:   241 AVL 243
             AV+
Sbjct:   241 AVM 243

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA;ISS

GO:0003978 "UDP-glucose 4-epimerase activity" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=ISM;IDA

GO:0006012 "galactose metabolic process" evidence=IEA

GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0019567 "arabinose biosynthetic process" evidence=IMP

GO:0050373 "UDP-arabinose 4-epimerase activity" evidence=IDA

GO:0009723 "response to ethylene stimulus" evidence=RCA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA

GO:0035556 "intracellular signal transduction" evidence=RCA

GO:0052542 "defense response by callose deposition" evidence=RCA

GO:0009832 "plant-type cell wall biogenesis" evidence=IMP

TAIR|locus:2163401 DUR "DEFECTIVE UGE IN ROOT" [Arabidopsis thaliana (taxid:3702)]

 Score = 879 (314.5 bits), Expect = 5.3e-88, P = 5.3e-88
 Identities = 172/225 (76%), Positives = 187/225 (83%)

Query:    19 FGGLDYADPKRKSNFAGKFILAAALTALCIFLLKQXXXXXXXXXXXQHEEGVTHVLVTGG 78
             F  +D  +PK K+N  GK +L A+L  L I ++ Q           Q EEGVTHVLVTGG
Sbjct:    43 FVEMDCLEPKTKNNLTGKLLLVASLLILAIIVISQSSSFTSPSAFSQREEGVTHVLVTGG 102

Query:    79 AGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVN 138
             AGYIGSHAALRLL+DSYRVTIVDNLSRGN+GAVK LQ+LFP+ GRLQFIYADLGD  AV 
Sbjct:   103 AGYIGSHAALRLLRDSYRVTIVDNLSRGNLGAVKTLQQLFPQTGRLQFIYADLGDPLAVE 162

Query:   139 KFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCA 198
             K FSENAFDAVMHFAAVAYVGESTL PLKYYHNITSNTL VLE+MARH V  LIYSSTCA
Sbjct:   163 KIFSENAFDAVMHFAAVAYVGESTLYPLKYYHNITSNTLGVLEAMARHKVKKLIYSSTCA 222

Query:   199 TYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVL 243
             TYGEPEKMPITE+TPQ PINPYGKAKKMAED+ILDFSKNSDMAV+
Sbjct:   223 TYGEPEKMPITEDTPQVPINPYGKAKKMAEDMILDFSKNSDMAVM 267

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA;ISS

GO:0003978 "UDP-glucose 4-epimerase activity" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0006012 "galactose metabolic process" evidence=IEA

GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

TAIR|locus:2123466 UGE5 "UDP-D-glucose/UDP-D-galactose 4-epimerase 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 381 (139.2 bits), Expect = 3.1e-35, P = 3.1e-35
 Identities = 77/163 (47%), Positives = 105/163 (64%)

Query:    72 HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPG-RLQFIYAD 130
             +VLV+GGAGYIGSH  L+LL   Y V +VDNL   +  +++ +++L  E G RL F   D
Sbjct:     5 NVLVSGGAGYIGSHTVLQLLLGGYSVVVVDNLDNSSAVSLQRVKKLAAEHGERLSFHQVD 64

Query:   131 LGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDT 190
             L D  A+ K FSE  FDAV+HFA +  VGES   PL YY+N    T+ +LE MA+HG   
Sbjct:    65 LRDRSALEKIFSETKFDAVIHFAGLKAVGESVEKPLLYYNNNLVGTITLLEVMAQHGCKN 124

Query:   191 LIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILD 233
             L++SS+   YG P+++P TEE P + +NPYG+ K   E+I  D
Sbjct:   125 LVFSSSATVYGSPKEVPCTEEFPISALNPYGRTKLFIEEICRD 167

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0003978 "UDP-glucose 4-epimerase activity" evidence=IEA;IDA

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0005975 "carbohydrate metabolic process" evidence=IEA

GO:0006012 "galactose metabolic process" evidence=IEA

GO:0016857 "racemase and epimerase activity, acting on carbohydrates and derivatives" evidence=IEA

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0046983 "protein dimerization activity" evidence=IPI

TAIR|locus:2138121 UGE2 "UDP-D-glucose/UDP-D-galactose 4-epimerase 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 371 (135.7 bits), Expect = 3.6e-34, P = 3.6e-34
 Identities = 77/178 (43%), Positives = 110/178 (61%)

Query:    73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPG-RLQFIYADL 131
             VLVTGGAGYIGSH  L+LL+  Y   +VDN    +  +++ +++L  E G RL F   DL
Sbjct:     5 VLVTGGAGYIGSHTVLQLLEGGYSAVVVDNYDNSSAASLQRVKKLAGENGNRLSFHQVDL 64

Query:   132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTL 191
              D  A+ K FSE  FDAV+HFA +  VGES   PL YY+N    T+ +LE MA++G   L
Sbjct:    65 RDRPALEKIFSETKFDAVIHFAGLKAVGESVEKPLLYYNNNIVGTVTLLEVMAQYGCKNL 124

Query:   192 IYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKN-SDMAVLQCHRF 248
             ++SS+   YG P+++P TEE+P +  NPYG+ K   E+I  D  ++ S+  ++    F
Sbjct:   125 VFSSSATVYGWPKEVPCTEESPISATNPYGRTKLFIEEICRDVHRSDSEWKIILLRYF 182

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0003978 "UDP-glucose 4-epimerase activity" evidence=IEA;IGI;IDA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006012 "galactose metabolic process" evidence=IEA

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0005829 "cytosol" evidence=IDA

GO:0046983 "protein dimerization activity" evidence=IPI

GO:0042546 "cell wall biogenesis" evidence=IMP

TAIR|locus:2014235 RHD1 "ROOT HAIR DEFECTIVE 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 370 (135.3 bits), Expect = 4.6e-34, P = 4.6e-34
 Identities = 73/168 (43%), Positives = 107/168 (63%)

Query:    70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIY- 128
             V ++LVTGGAGYIGSH  L+LL   Y   ++DNL   ++ +++ +++L  + G+   ++ 
Sbjct:     2 VGNILVTGGAGYIGSHTVLQLLLGGYNTVVIDNLDNSSLVSIQRVKDLAGDHGQNLTVHQ 61

Query:   129 ADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV 188
              DL D  A+ K FSE  FDAVMHFA +  VGES   PL YY+N    T+ +LE MA HG 
Sbjct:    62 VDLRDKPALEKVFSETKFDAVMHFAGLKAVGESVAKPLLYYNNNLIATITLLEVMAAHGC 121

Query:   189 DTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSK 236
               L++SS+   YG P+++P TEE+P + ++PYG+ K   EDI  D  +
Sbjct:   122 KKLVFSSSATVYGWPKEVPCTEESPLSGMSPYGRTKLFIEDICRDVQR 169

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0003978 "UDP-glucose 4-epimerase activity" evidence=IEA;IGI;IDA;TAS

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0006012 "galactose metabolic process" evidence=IEA

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0010053 "root epidermal cell differentiation" evidence=IMP

GO:0009832 "plant-type cell wall biogenesis" evidence=TAS

GO:0009969 "xyloglucan biosynthetic process" evidence=IMP

GO:0010246 "rhamnogalacturonan I biosynthetic process" evidence=IMP

GO:0010306 "rhamnogalacturonan II biosynthetic process" evidence=IMP

GO:0005795 "Golgi stack" evidence=IDA

GO:0046983 "protein dimerization activity" evidence=IPI

GO:0042546 "cell wall biogenesis" evidence=IMP

TIGR_CMR|CJE_1273 CJE_1273 "UDP-glucose 4-epimerase" [Campylobacter jejuni RM1221 (taxid:195099)]

 Score = 362 (132.5 bits), Expect = 3.2e-33, P = 3.2e-33
 Identities = 72/163 (44%), Positives = 107/163 (65%)

Query:    73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
             +L++GGAGYIGSH   + LK  + + ++DNLS+G+  A++ LQ++       +F   DL 
Sbjct:     3 ILISGGAGYIGSHTLRQFLKTDHEICVLDNLSKGSKIAIEDLQKI----RAFKFFEQDLS 58

Query:   133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
             D + V   F    FDA++HFAA   V ES  +PLKYY N T NT  ++E+  + GV+  I
Sbjct:    59 DFQGVKALFEREKFDAIVHFAASIEVFESMQNPLKYYMNNTVNTTNLIETCLQTGVNKFI 118

Query:   193 YSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFS 235
             +SST ATYGEP+   ++E +P APINPYG++K M+E+++ D S
Sbjct:   119 FSSTAATYGEPQTPVVSETSPLAPINPYGRSKLMSEEVLRDAS 161

GO:0003978 "UDP-glucose 4-epimerase activity" evidence=ISS

GO:0006012 "galactose metabolic process" evidence=ISS

TIGR_CMR|BA_5700 BA_5700 "UDP-glucose 4-epimerase" [Bacillus anthracis str. Ames (taxid:198094)]

 Score = 352 (129.0 bits), Expect = 3.7e-32, P = 3.7e-32
 Identities = 68/167 (40%), Positives = 107/167 (64%)

Query:    73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
             +L+TGGAGYIGSH  + LL ++Y++ +VDNLS  +I ++  ++E+  +  + +F   ++ 
Sbjct:     3 ILITGGAGYIGSHTCVELLNNNYKIIVVDNLSNSSIESLNRVKEITGK--QFEFYKENVL 60

Query:   133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
             + + +N+ F EN  +AV+HFA    VGEST  PL YY+N   + +V+ + M +H V   I
Sbjct:    61 NREKMNEIFLENNIEAVIHFAGFKAVGESTTTPLAYYYNNIISAIVLCDVMQKHNVKNFI 120

Query:   193 YSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSD 239
             +SS+   YG P+ +PITEE P +  NPYG+ K M E I+ D +K  D
Sbjct:   121 FSSSATVYGIPKTLPITEEFPLSVTNPYGQTKLMIEQIMRDVAKADD 167

GO:0003978 "UDP-glucose 4-epimerase activity" evidence=ISS

GO:0006012 "galactose metabolic process" evidence=ISS

TIGR_CMR|SO_1664 SO_1664 "UDP-glucose 4-epimerase" [Shewanella oneidensis MR-1 (taxid:211586)]

 Score = 337 (123.7 bits), Expect = 1.4e-30, P = 1.4e-30
 Identities = 68/167 (40%), Positives = 102/167 (61%)

Query:    73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
             +LVTGGAGYIG+H  + LL     V ++DNLS  +I A+  ++ +  +   + F   D+ 
Sbjct:     3 ILVTGGAGYIGTHTVVELLNAGSEVIVLDNLSNSSIEALDRVERITGKS--VTFYQGDIL 60

Query:   133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
             +   + K FS+++ DAV+HFA +  VGES   PLKYY N  + TL++ + MA   V  L+
Sbjct:    61 NKALLQKVFSDHSIDAVIHFAGLKAVGESVAKPLKYYENNVTGTLILCQVMAEFKVKNLV 120

Query:   193 YSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSD 239
             +SS+   YG+P  +PITE+ P    NPYG++K M E I+ D   +SD
Sbjct:   121 FSSSATVYGDPASLPITEDFPTGATNPYGQSKLMVEHILADLH-HSD 166

GO:0003978 "UDP-glucose 4-epimerase activity" evidence=ISS

GO:0005975 "carbohydrate metabolic process" evidence=ISS

TAIR|locus:2010371 UGE1 "UDP-D-glucose/UDP-D-galactose 4-epimerase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 337 (123.7 bits), Expect = 1.4e-30, P = 1.4e-30
 Identities = 67/167 (40%), Positives = 104/167 (62%)

Query:    72 HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELF-PEPGR-LQFIYA 129
             ++LVTGGAG+IG+H  ++LLKD ++V+I+DN     I AV  ++EL  P+  + L F   
Sbjct:     8 NILVTGGAGFIGTHTVVQLLKDGFKVSIIDNFDNSVIEAVDRVRELVGPDLSKKLDFNLG 67

Query:   130 DLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD 189
             DL +   + K FS+  FDAV+HFA +  VGES  +P +Y+ N    T+ + E+MA++   
Sbjct:    68 DLRNKGDIEKLFSKQRFDAVIHFAGLKAVGESVENPRRYFDNNLVGTINLYETMAKYNCK 127

Query:   190 TLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSK 236
              +++SS+   YG+PEK+P  E+     +NPYG+ K   E+I  D  K
Sbjct:   128 MMVFSSSATVYGQPEKIPCMEDFELKAMNPYGRTKLFLEEIARDIQK 174

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0003978 "UDP-glucose 4-epimerase activity" evidence=IEA;IGI;IDA

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0005975 "carbohydrate metabolic process" evidence=IEA

GO:0006012 "galactose metabolic process" evidence=IEA

GO:0016857 "racemase and epimerase activity, acting on carbohydrates and derivatives" evidence=IEA

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0005829 "cytosol" evidence=IDA;TAS

GO:0046983 "protein dimerization activity" evidence=IPI

GO:0005886 "plasma membrane" evidence=IDA

GO:0046369 "galactose biosynthetic process" evidence=IDA

DICTYBASE|DDB_G0275295 galE "UDP-glucose 4-epimerase" [Dictyostelium discoideum (taxid:44689)]

 Score = 336 (123.3 bits), Expect = 1.8e-30, P = 1.8e-30
 Identities = 65/161 (40%), Positives = 101/161 (62%)

Query:    73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
             ++VTGGAGYIGSH  + L++  Y   IVDNLS  ++ A+K ++ +  +   ++F + D+ 
Sbjct:     8 IMVTGGAGYIGSHTVIELIEAGYTPVIVDNLSNSSLEAIKRVESITGK--EIEFHHVDIM 65

Query:   133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
             + KA+++ F      +V+HFA +  VGES   PLKYY+N  + TL +L  M +H V  L+
Sbjct:    66 NEKALDEIFETGNIRSVIHFAGLKAVGESNKLPLKYYNNNIAGTLTLLNLMDKHRVKKLV 125

Query:   193 YSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILD 233
             +SS+   YG+P  +PITE+ P +  NPYG+ K   E I+ D
Sbjct:   126 FSSSATVYGDPHTVPITEDFPLSATNPYGRTKLYVEGILQD 166

GO:0050662 "coenzyme binding" evidence=IEA

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0016857 "racemase and epimerase activity, acting on carbohydrates and derivatives" evidence=IEA

GO:0006012 "galactose metabolic process" evidence=IEA

GO:0005975 "carbohydrate metabolic process" evidence=IEA

GO:0003978 "UDP-glucose 4-epimerase activity" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0016853 "isomerase activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q8H0B6	ARAE2_ORYSJ	5, ., 1, ., 3, ., 5	0.7929	0.9153	0.5805	yes	no
Q9SA77	ARAE1_ARATH	5, ., 1, ., 3, ., 5	0.8306	1.0	0.5918	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	5.1.3	0.921

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: scaffold_103410.1 annotation not avaliable (418 aa) (Arabidopsis lyrata)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	248
cd05247	323	cd05247, UDP_G4E_1_SDR_e, UDP-glucose 4 epimerase,	1e-85
COG1087	329	COG1087, GalE, UDP-glucose 4-epimerase [Cell envel	4e-75
TIGR01179	328	TIGR01179, galE, UDP-glucose-4-epimerase GalE	5e-72
PLN02240	352	PLN02240, PLN02240, UDP-glucose 4-epimerase	2e-59
pfam01370	233	pfam01370, Epimerase, NAD dependent epimerase/dehy	3e-42
cd05256	304	cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-e	3e-39
PRK10675	338	PRK10675, PRK10675, UDP-galactose-4-epimerase; Pro	2e-37
COG0451	314	COG0451, WcaG, Nucleoside-diphosphate-sugar epimer	1e-35
cd05234	305	cd05234, UDP_G4E_2_SDR_e, UDP-glucose 4 epimerase,	2e-33
cd08946	200	cd08946, SDR_e, extended (e) SDRs	1e-32
cd05246	315	cd05246, dTDP_GD_SDR_e, dTDP-D-glucose 4,6-dehydra	2e-28
cd05253	332	cd05253, UDP_GE_SDE_e, UDP glucuronic acid epimera	6e-27
cd05257	316	cd05257, Arna_like_SDR_e, Arna decarboxylase_like,	3e-24
cd05260	316	cd05260, GDP_MD_SDR_e, GDP-mannose 4,6 dehydratase	8e-23
TIGR01181	317	TIGR01181, dTDP_gluc_dehyt, dTDP-glucose 4,6-dehyd	2e-21
COG1088	340	COG1088, RfbB, dTDP-D-glucose 4,6-dehydratase [Cel	5e-21
cd05238	305	cd05238, Gne_like_SDR_e, Escherichia coli Gne (a n	1e-19
cd05264	300	cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase	1e-18
cd05258	337	cd05258, CDP_TE_SDR_e, CDP-tyvelose 2-epimerase, e	1e-17
cd05230	305	cd05230, UGD_SDR_e, UDP-glucuronate decarboxylase	4e-17
cd05227	301	cd05227, AR_SDR_e, aldehyde reductase, extended (e	4e-17
cd05232	303	cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase,	4e-17
cd05237	287	cd05237, UDP_invert_4-6DH_SDR_e, UDP-Glcnac (UDP-l	6e-17
cd05228	318	cd05228, AR_FR_like_1_SDR_e, uncharacterized subgr	9e-17
cd08957	307	cd08957, WbmH_like_SDR_e, Bordetella bronchiseptic	1e-16
PLN02260	668	PLN02260, PLN02260, probable rhamnose biosynthetic	1e-16
TIGR04180	297	TIGR04180, EDH_00030, NAD dependent epimerase/dehy	8e-16
cd05273	328	cd05273, GME-like_SDR_e, Arabidopsis thaliana GDP-	6e-13
COG1089	345	COG1089, Gmd, GDP-D-mannose dehydratase [Cell enve	2e-12
PRK10084	352	PRK10084, PRK10084, dTDP-glucose 4,6 dehydratase;	6e-12
TIGR02197	314	TIGR02197, heptose_epim, ADP-L-glycero-D-manno-hep	1e-11
TIGR03466	328	TIGR03466, HpnA, hopanoid-associated sugar epimera	2e-11
PRK10217	355	PRK10217, PRK10217, dTDP-glucose 4,6-dehydratase;	2e-11
cd05226	176	cd05226, SDR_e_a, Extended (e) and atypical (a) SD	2e-11
cd05240	306	cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase	7e-11
COG1086	588	COG1086, COG1086, Predicted nucleoside-diphosphate	3e-10
cd05255	382	cd05255, SQD1_like_SDR_e, UDP_sulfoquinovose_synth	3e-10
PLN02166	436	PLN02166, PLN02166, dTDP-glucose 4,6-dehydratase	9e-10
cd05265	250	cd05265, SDR_a1, atypical (a) SDRs, subgroup 1	1e-09
cd05193	295	cd05193, AR_like_SDR_e, aldehyde reductase, flavon	2e-09
cd09813	335	cd09813, 3b-HSD-NSDHL-like_SDR_e, human NSDHL (NAD	2e-09
COG1091	281	COG1091, RfbD, dTDP-4-dehydrorhamnose reductase [C	2e-09
cd05248	317	cd05248, ADP_GME_SDR_e, ADP-L-glycero-D-mannohepto	2e-09
cd05254	280	cd05254, dTDP_HR_like_SDR_e, dTDP-6-deoxy-L-lyxo-4	2e-09
cd05239	300	cd05239, GDP_FS_SDR_e, GDP-fucose synthetase, exte	3e-09
TIGR01214	287	TIGR01214, rmlD, dTDP-4-dehydrorhamnose reductase	4e-09
cd05241	331	cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid d	5e-09
cd08958	293	cd08958, FR_SDR_e, flavonoid reductase (FR), exten	6e-09
pfam01073	280	pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydr	7e-09
PLN02206	442	PLN02206, PLN02206, UDP-glucuronate decarboxylase	9e-09
cd05263	293	cd05263, MupV_like_SDR_e, Pseudomonas fluorescens	9e-09
pfam02719	280	pfam02719, Polysacc_synt_2, Polysaccharide biosynt	4e-08
PRK15181	348	PRK15181, PRK15181, Vi polysaccharide biosynthesis	7e-08
cd09811	354	cd09811, 3b-HSD_HSDB1_like_SDR_e, human 3beta-HSD	1e-07
TIGR01472	343	TIGR01472, gmd, GDP-mannose 4,6-dehydratase	1e-07
cd05233	234	cd05233, SDR_c, classical (c) SDRs	2e-07
PRK05653	246	PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-07
PRK12825	249	PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein)	4e-07
cd05252	336	cd05252, CDP_GD_SDR_e, CDP-D-glucose 4,6-dehydrata	4e-07
pfam04321	284	pfam04321, RmlD_sub_bind, RmlD substrate binding d	6e-07
PLN02653	340	PLN02653, PLN02653, GDP-mannose 4,6-dehydratase	3e-06
cd09812	339	cd09812, 3b-HSD_like_1_SDR_e, 3beta-hydroxysteroid	4e-06
PLN02572	442	PLN02572, PLN02572, UDP-sulfoquinovose synthase	9e-06
cd05272	308	cd05272, TDH_SDR_e, L-threonine dehydrogenase, ext	1e-05
cd05357	234	cd05357, PR_SDR_c, pteridine reductase (PR), class	2e-05
TIGR01777	291	TIGR01777, yfcH, TIGR01777 family protein	2e-05
PRK12826	251	PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-prote	3e-05
cd05243	203	cd05243, SDR_a5, atypical (a) SDRs, subgroup 5	4e-05
cd05229	302	cd05229, SDR_a3, atypical (a) SDRs, subgroup 3	5e-05
cd05242	296	cd05242, SDR_a8, atypical (a) SDRs, subgroup 8	5e-05
TIGR01830	239	TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier	6e-05
COG1028	251	COG1028, FabG, Dehydrogenases with different speci	2e-04
pfam13460	182	pfam13460, NAD_binding_10, NADH(P)-binding	2e-04
cd05366	257	cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol	2e-04
cd08939	239	cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine	3e-04
PRK07453	322	PRK07453, PRK07453, protochlorophyllide oxidoreduc	4e-04
cd05344	253	cd05344, BKR_like_SDR_like, putative beta-ketoacyl	4e-04
PRK12827	249	PRK12827, PRK12827, short chain dehydrogenase; Pro	5e-04
TIGR02415	254	TIGR02415, 23BDH, acetoin reductases	5e-04
PRK12939	250	PRK12939, PRK12939, short chain dehydrogenase; Pro	6e-04
cd05333	240	cd05333, BKR_SDR_c, beta-Keto acyl carrier protein	6e-04
PLN02657	390	PLN02657, PLN02657, 3,8-divinyl protochlorophyllid	6e-04
TIGR02622	349	TIGR02622, CDP_4_6_dhtase, CDP-glucose 4,6-dehydra	8e-04
TIGR03589	324	TIGR03589, PseB, UDP-N-acetylglucosamine 4,6-dehyd	0.001
PRK08643	256	PRK08643, PRK08643, acetoin reductase; Validated	0.001
PLN02695	370	PLN02695, PLN02695, GDP-D-mannose-3',5'-epimerase	0.001
cd05245	293	cd05245, SDR_a2, atypical (a) SDRs, subgroup 2	0.001
pfam00106	167	pfam00106, adh_short, short chain dehydrogenase	0.002
cd05327	269	cd05327, retinol-DH_like_SDR_c_like, retinol dehyd	0.002
cd05262	291	cd05262, SDR_a7, atypical (a) SDRs, subgroup 7	0.002
cd05323	244	cd05323, ADH_SDR_c_like, insect type alcohol dehyd	0.002
PRK05565	247	PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein)	0.002
cd05362	243	cd05362, THN_reductase-like_SDR_c, tetrahydroxynap	0.002
COG3320	382	COG3320, COG3320, Putative dehydrogenase domain of	0.002
COG1090	297	COG1090, COG1090, Predicted nucleoside-diphosphate	0.002
PRK11150	308	PRK11150, rfaD, ADP-L-glycero-D-mannoheptose-6-epi	0.003
PLN02896	353	PLN02896, PLN02896, cinnamyl-alcohol dehydrogenase	0.004
pfam07993	245	pfam07993, NAD_binding_4, Male sterility protein	0.004
cd05271	273	cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ub	0.004
PRK09186	256	PRK09186, PRK09186, flagellin modification protein	0.004

>gnl|CDD|187558 cd05247, UDP_G4E_1_SDR_e, UDP-glucose 4 epimerase, subgroup 1, extended (e) SDRs

 Score =  257 bits (659), Expect = 1e-85
 Identities = 81/171 (47%), Positives = 108/171 (63%), Gaps = 5/171 (2%)

Query: 72  HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
            VLVTGGAGYIGSH  + LL+  Y V ++DNLS G+  A+  ++++  E     F   D+
Sbjct: 1   KVLVTGGAGYIGSHTVVELLEAGYDVVVLDNLSNGHREALPRIEKIRIE-----FYEGDI 55

Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTL 191
            D  A++K F+E+  DAV+HFAA+  VGES   PLKYY N    TL +LE+M  HGV   
Sbjct: 56  RDRAALDKVFAEHKIDAVIHFAALKAVGESVQKPLKYYDNNVVGTLNLLEAMRAHGVKNF 115

Query: 192 IYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAV 242
           ++SS+ A YGEPE +PITEE P  P NPYG+ K M E I+ D +K   +  
Sbjct: 116 VFSSSAAVYGEPETVPITEEAPLNPTNPYGRTKLMVEQILRDLAKAPGLNY 166

UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 323

>gnl|CDD|224012 COG1087, GalE, UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

 Score =  230 bits (589), Expect = 4e-75
 Identities = 82/170 (48%), Positives = 106/170 (62%), Gaps = 8/170 (4%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           VLVTGGAGYIGSH   +LLK  + V ++DNLS G+  A+  LQ         +F   DL 
Sbjct: 3   VLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKLQ--------FKFYEGDLL 54

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
           D   +   F EN  DAV+HFAA   VGES  +PLKYY N    TL ++E+M + GV   I
Sbjct: 55  DRALLTAVFEENKIDAVVHFAASISVGESVQNPLKYYDNNVVGTLNLIEAMLQTGVKKFI 114

Query: 193 YSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAV 242
           +SST A YGEP   PI+E +P APINPYG++K M+E+I+ D +K +   V
Sbjct: 115 FSSTAAVYGEPTTSPISETSPLAPINPYGRSKLMSEEILRDAAKANPFKV 164

Length = 329

>gnl|CDD|213592 TIGR01179, galE, UDP-glucose-4-epimerase GalE

 Score =  222 bits (568), Expect = 5e-72
 Identities = 76/164 (46%), Positives = 106/164 (64%), Gaps = 4/164 (2%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           +LVTGGAGYIGSH   +LL+  + V I+DNLS G+  A+   + + P      F+  DL 
Sbjct: 2   ILVTGGAGYIGSHTVRQLLESGHEVVILDNLSNGSREALPRGERITPVT----FVEGDLR 57

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
           D + +++ F E+  DAV+HFA +  VGES   PLKYY N    TL +LE+M + GV   I
Sbjct: 58  DRELLDRLFEEHKIDAVIHFAGLIAVGESVQKPLKYYRNNVVGTLNLLEAMQQAGVKKFI 117

Query: 193 YSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSK 236
           +SS+ A YGEP  +PI+E++P  PINPYG++K M+E I+ D  K
Sbjct: 118 FSSSAAVYGEPSSIPISEDSPLGPINPYGRSKLMSEQILRDLQK 161

Alternate name: UDPgalactose 4-epimerase This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from This model and described by a separate model [Energy metabolism, Sugars]. Length = 328

>gnl|CDD|177883 PLN02240, PLN02240, UDP-glucose 4-epimerase

 Score =  191 bits (487), Expect = 2e-59
 Identities = 75/163 (46%), Positives = 103/163 (63%), Gaps = 1/163 (0%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPG-RLQFIYADL 131
           +LVTGGAGYIGSH  L+LL   Y+V ++DNL   +  A++ ++EL  + G  L F   DL
Sbjct: 8   ILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDL 67

Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTL 191
            D +A+ K F+   FDAV+HFA +  VGES   PL YY N    T+ +LE MA+HG   L
Sbjct: 68  RDKEALEKVFASTRFDAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKHGCKKL 127

Query: 192 IYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDF 234
           ++SS+   YG+PE++P TEE P +  NPYG+ K   E+I  D 
Sbjct: 128 VFSSSATVYGQPEEVPCTEEFPLSATNPYGRTKLFIEEICRDI 170

Length = 352

>gnl|CDD|216461 pfam01370, Epimerase, NAD dependent epimerase/dehydratase family

 Score =  143 bits (362), Expect = 3e-42
 Identities = 59/168 (35%), Positives = 88/168 (52%), Gaps = 10/168 (5%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           +LVTGG G+IGSH   RLL++ Y V     L R         +      GR++F   DL 
Sbjct: 1   ILVTGGTGFIGSHLVRRLLQEGYEVI---VLGRRR-------RSESLNTGRIRFHEGDLT 50

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
           D  A+ +  +E   DAV+H AA + VG S  DP  +       TL +LE+  R GV   +
Sbjct: 51  DPDALERLLAEVQPDAVIHLAAQSGVGASFEDPADFIRANVLGTLRLLEAARRAGVKRFV 110

Query: 193 YSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDM 240
           ++S+   YG+    PITE+TP  P++PY  AK  AE ++  +++   +
Sbjct: 111 FASSSEVYGDVADPPITEDTPLGPLSPYAAAKLAAERLVEAYARAYGL 158

This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. Length = 233

>gnl|CDD|187566 cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-epimerase, extended (e) SDRs

 Score =  137 bits (347), Expect = 3e-39
 Identities = 60/158 (37%), Positives = 85/158 (53%), Gaps = 10/158 (6%)

Query: 72  HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPE-PGRLQFIYAD 130
            VLVTGGAG+IGSH   RLL+  + V ++DNLS G        +E  PE    ++FI  D
Sbjct: 1   RVLVTGGAGFIGSHLVERLLERGHEVIVLDNLSTGK-------KENLPEVKPNVKFIEGD 53

Query: 131 LGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDT 190
           + D + V   F     D V H AA A V  S  DP+K +      TL +LE+  + GV  
Sbjct: 54  IRDDELVEFAFEG--VDYVFHQAAQASVPRSIEDPIKDHEVNVLGTLNLLEAARKAGVKR 111

Query: 191 LIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAE 228
            +Y+S+ + YG+P  +P  E+ P  P++PY  +K   E
Sbjct: 112 FVYASSSSVYGDPPYLPKDEDHPPNPLSPYAVSKYAGE 149

This subgroup contains UDP-N-acetylglucosamine 4-epimerase of Pseudomonas aeruginosa, WbpP, an extended SDR, that catalyzes the NAD+ dependent conversion of UDP-GlcNAc and UDPGalNA to UDP-Glc and UDP-Gal. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 304

>gnl|CDD|182639 PRK10675, PRK10675, UDP-galactose-4-epimerase; Provisional

 Score =  133 bits (337), Expect = 2e-37
 Identities = 63/165 (38%), Positives = 95/165 (57%), Gaps = 3/165 (1%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           VLVTGG+GYIGSH  ++LL++ + V I+DNL       + V++ L  +     F+  D+ 
Sbjct: 3   VLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGK--HPTFVEGDIR 60

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
           +   + +   ++A D V+HFA +  VGES   PL+YY N  + TL ++ +M    V  LI
Sbjct: 61  NEALLTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNLI 120

Query: 193 YSSTCATYGEPEKMPITEETPQA-PINPYGKAKKMAEDIILDFSK 236
           +SS+   YG+  K+P  E  P   P +PYGK+K M E I+ D  K
Sbjct: 121 FSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQK 165

Length = 338

>gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score =  128 bits (322), Expect = 1e-35
 Identities = 57/174 (32%), Positives = 89/174 (51%), Gaps = 14/174 (8%)

Query: 72  HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
            +LVTGGAG+IGSH   RLL   + V  +D L  G            P    ++F+  DL
Sbjct: 2   RILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLD----------PLLSGVEFVVLDL 51

Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTL-DPLKYYHNITSNTLVVLESMARHGVDT 190
            D   V++       DAV+H AA + V +S   DP ++       TL +LE+    GV  
Sbjct: 52  TDRDLVDELAKG-VPDAVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAGVKR 110

Query: 191 LIYSSTCAT-YGEPEKMPITEE-TPQAPINPYGKAKKMAEDIILDFSKNSDMAV 242
            +++S+ +  YG+P  +PI E+  P  P+NPYG +K  AE ++  +++   + V
Sbjct: 111 FVFASSVSVVYGDPPPLPIDEDLGPPRPLNPYGVSKLAAEQLLRAYARLYGLPV 164

Length = 314

>gnl|CDD|187545 cd05234, UDP_G4E_2_SDR_e, UDP-glucose 4 epimerase, subgroup 2, extended (e) SDRs

 Score =  122 bits (308), Expect = 2e-33
 Identities = 56/172 (32%), Positives = 82/172 (47%), Gaps = 7/172 (4%)

Query: 72  HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
            +LVTGGAG+IGSH   RLL++   V +VDNLS G    ++   E        +F+  DL
Sbjct: 1   RILVTGGAGFIGSHLVDRLLEEGNEVVVVDNLSSGRRENIEPEFENK----AFRFVKRDL 56

Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTL 191
            D        ++   D V H AA   V     DP          T  VLE+M  +GV  +
Sbjct: 57  LDTADK---VAKKDGDTVFHLAANPDVRLGATDPDIDLEENVLATYNVLEAMRANGVKRI 113

Query: 192 IYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVL 243
           +++S+   YGE + +P  E+ P  PI+ YG +K  AE +I  ++        
Sbjct: 114 VFASSSTVYGEAKVIPTPEDYPPLPISVYGASKLAAEALISAYAHLFGFQAW 165

UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of archaeal and bacterial proteins, and has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305

>gnl|CDD|212494 cd08946, SDR_e, extended (e) SDRs

 Score =  117 bits (296), Expect = 1e-32
 Identities = 50/171 (29%), Positives = 79/171 (46%), Gaps = 45/171 (26%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           +LVTGGAG+IGSH   RLL+  + V ++D                               
Sbjct: 1   ILVTGGAGFIGSHLVRRLLERGHEVVVIDR------------------------------ 30

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYH-NITSNTLVVLESMARHGVDTL 191
                         D V+H AA+  V  S  +P + +  N+   TL +LE+  + GV   
Sbjct: 31  -------------LDVVVHLAALVGVPASWDNPDEDFETNVVG-TLNLLEAARKAGVKRF 76

Query: 192 IYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAV 242
           +Y+S+ + YG PE +P  EETP  P++PYG +K  AE ++  + ++  + V
Sbjct: 77  VYASSASVYGSPEGLPEEEETPPRPLSPYGVSKLAAEHLLRSYGESYGLPV 127

Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 200

>gnl|CDD|187557 cd05246, dTDP_GD_SDR_e, dTDP-D-glucose 4,6-dehydratase, extended (e) SDRs

 Score =  109 bits (275), Expect = 2e-28
 Identities = 57/168 (33%), Positives = 94/168 (55%), Gaps = 12/168 (7%)

Query: 71  THVLVTGGAGYIGSHAALRLLK--DSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIY 128
             +LVTGGAG+IGS+    LL     Y++  +D L+    G ++ L+++   P R +F+ 
Sbjct: 1   MKILVTGGAGFIGSNFVRYLLNKYPDYKIINLDKLTYA--GNLENLEDVSSSP-RYRFVK 57

Query: 129 ADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSN---TLVVLESMAR 185
            D+ DA+ V++ F E   DAV+HFAA ++V  S  DP  +   I +N   T  +LE+  +
Sbjct: 58  GDICDAELVDRLFEEEKIDAVIHFAAESHVDRSISDPEPF---IRTNVLGTYTLLEAARK 114

Query: 186 HGVDTLIYSSTCATYGE-PEKMPITEETPQAPINPYGKAKKMAEDIIL 232
           +GV   ++ ST   YG+  +    TE +P AP +PY  +K  A+ ++ 
Sbjct: 115 YGVKRFVHISTDEVYGDLLDDGEFTETSPLAPTSPYSASKAAADLLVR 162

This subgroup contains dTDP-D-glucose 4,6-dehydratase and related proteins, members of the extended-SDR family, with the characteristic Rossmann fold core region, active site tetrad and NAD(P)-binding motif. dTDP-D-glucose 4,6-dehydratase is closely related to other sugar epimerases of the SDR family. dTDP-D-dlucose 4,6,-dehydratase catalyzes the second of four steps in the dTDP-L-rhamnose pathway (the dehydration of dTDP-D-glucose to dTDP-4-keto-6-deoxy-D-glucose) in the synthesis of L-rhamnose, a cell wall component of some pathogenic bacteria. In many gram negative bacteria, L-rhamnose is an important constituent of lipopoylsaccharide O-antigen. The larger N-terminal portion of dTDP-D-Glucose 4,6-dehydratase forms a Rossmann fold NAD-binding domain, while the C-terminus binds the sugar substrate. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 315

>gnl|CDD|187563 cd05253, UDP_GE_SDE_e, UDP glucuronic acid epimerase, extended (e) SDRs

 Score =  105 bits (265), Expect = 6e-27
 Identities = 61/163 (37%), Positives = 89/163 (54%), Gaps = 12/163 (7%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQ---ELFPEPGRLQFIYA 129
           +LVTG AG+IG H A RLL+    V  +DNL+  +   V++ +   EL  + G  +F+  
Sbjct: 3   ILVTGAAGFIGFHVAKRLLERGDEVVGIDNLN--DYYDVRLKEARLELLGKSGGFKFVKG 60

Query: 130 DLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSN---TLVVLESMARH 186
           DL D +A+ + F ++ FDAV+H AA A V  S  +P  Y   + SN    L +LE     
Sbjct: 61  DLEDREALRRLFKDHEFDAVIHLAAQAGVRYSLENPHAY---VDSNIVGFLNLLELCRHF 117

Query: 187 GVDTLIYSSTCATYGEPEKMPITEETPQA-PINPYGKAKKMAE 228
           GV  L+Y+S+ + YG   KMP +E+     PI+ Y   KK  E
Sbjct: 118 GVKHLVYASSSSVYGLNTKMPFSEDDRVDHPISLYAATKKANE 160

This subgroup contains UDP-D-glucuronic acid 4-epimerase, an extended SDR, which catalyzes the conversion of UDP-alpha-D-glucuronic acid to UDP-alpha-D-galacturonic acid. This group has the SDR's canonical catalytic tetrad and the TGxxGxxG NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 332

>gnl|CDD|187567 cd05257, Arna_like_SDR_e, Arna decarboxylase_like, extended (e) SDRs

 Score = 98.1 bits (245), Expect = 3e-24
 Identities = 51/167 (30%), Positives = 75/167 (44%), Gaps = 10/167 (5%)

Query: 72  HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
           +VLVTG  G+IGSH   RLL++ + V  +D  +  N               R  FI  D+
Sbjct: 1   NVLVTGADGFIGSHLTERLLREGHEVRALDIYNSFN----SWGLLDNAVHDRFHFISGDV 56

Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTL 191
            DA  V     +   D V H AA+  +  S   PL Y       TL VLE+        +
Sbjct: 57  RDASEVEYLVKKC--DVVFHLAALIAIPYSYTAPLSYVETNVFGTLNVLEAACVLYRKRV 114

Query: 192 IYSSTCATYGEPEKMPITEETPQAPIN----PYGKAKKMAEDIILDF 234
           +++ST   YG  + +PI E+ P   IN    PY  +K+ A+ +   +
Sbjct: 115 VHTSTSEVYGTAQDVPIDEDHPLLYINKPRSPYSASKQGADRLAYSY 161

Decarboxylase domain of ArnA. ArnA, is an enzyme involved in the modification of outer membrane protein lipid A of gram-negative bacteria. It is a bifunctional enzyme that catalyzes the NAD-dependent decarboxylation of UDP-glucuronic acid and N-10-formyltetrahydrofolate-dependent formylation of UDP-4-amino-4-deoxy-l-arabinose; its NAD-dependent decaboxylating activity is in the C-terminal 360 residues. This subgroup belongs to the extended SDR family, however the NAD binding motif is not a perfect match and the upstream Asn of the canonical active site tetrad is not conserved. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 316

>gnl|CDD|187570 cd05260, GDP_MD_SDR_e, GDP-mannose 4,6 dehydratase, extended (e) SDRs

 Score = 94.2 bits (235), Expect = 8e-23
 Identities = 47/154 (30%), Positives = 74/154 (48%), Gaps = 5/154 (3%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVT-IVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
            L+TG  G  GS+ A  LL+  Y V  IV   S  N      +  L+    R+   Y DL
Sbjct: 2   ALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTD---RIDHLYINKDRITLHYGDL 58

Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTL 191
            D+ ++ +   +   D + H AA ++V  S  DP          TL +LE++   G+D  
Sbjct: 59  TDSSSLRRAIEKVRPDEIYHLAAQSHVKVSFDDPEYTAEVNAVGTLNLLEAIRILGLDAR 118

Query: 192 IY-SSTCATYGEPEKMPITEETPQAPINPYGKAK 224
            Y +S+   YG+ +++P +E TP  P +PY  +K
Sbjct: 119 FYQASSSEEYGKVQELPQSETTPFRPRSPYAVSK 152

GDP-mannose 4,6 dehydratase, a homodimeric SDR, catalyzes the NADP(H)-dependent conversion of GDP-(D)-mannose to GDP-4-keto, 6-deoxy-(D)-mannose in the fucose biosynthesis pathway. These proteins have the canonical active site triad and NAD-binding pattern, however the active site Asn is often missing and may be substituted with Asp. A Glu residue has been identified as an important active site base. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 316

>gnl|CDD|130249 TIGR01181, dTDP_gluc_dehyt, dTDP-glucose 4,6-dehydratase

 Score = 90.5 bits (225), Expect = 2e-21
 Identities = 62/180 (34%), Positives = 91/180 (50%), Gaps = 20/180 (11%)

Query: 73  VLVTGGAGYIGS---HAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYA 129
           +LVTGGAG+IGS      L    D   V ++D L+    G ++ L +L   P R +F+  
Sbjct: 2   ILVTGGAGFIGSNFVRYILNEHPD-AEVIVLDKLTYA--GNLENLADLEDNP-RYRFVKG 57

Query: 130 DLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD 189
           D+GD + V++ F+E+  DAV+HFAA ++V  S   P  +       T  +LE++ ++  +
Sbjct: 58  DIGDRELVSRLFTEHQPDAVVHFAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHE 117

Query: 190 T-LIYSSTCATYGEPEK-MPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVLQCHR 247
               + ST   YG+ EK    TE TP AP +PY  A K A          SD  V   HR
Sbjct: 118 FRFHHISTDEVYGDLEKGDAFTETTPLAPSSPYS-ASKAA----------SDHLVRAYHR 166

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 317

>gnl|CDD|224013 COG1088, RfbB, dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

 Score = 89.6 bits (223), Expect = 5e-21
 Identities = 53/168 (31%), Positives = 84/168 (50%), Gaps = 17/168 (10%)

Query: 73  VLVTGGAGYIGSHAALRLLK--DSYRVTIVDNLS-RGNIGAVKVLQELFPEPGRLQFIYA 129
           +LVTGGAG+IGS+    +L       V  +D L+  GN+  +  +++      R +F+  
Sbjct: 3   ILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVEDS----PRYRFVQG 58

Query: 130 DLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSN---TLVVLESMARH 186
           D+ D + V++ F E   DAV+HFAA ++V  S   P  +   I +N   T  +LE+  ++
Sbjct: 59  DICDRELVDRLFKEYQPDAVVHFAAESHVDRSIDGPAPF---IQTNVVGTYTLLEAARKY 115

Query: 187 GVDT-LIYSSTCATYGEPEK--MPITEETPQAPINPYGKAKKMAEDII 231
                  + ST   YG+        TE TP  P +PY  A K A D++
Sbjct: 116 WGKFRFHHISTDEVYGDLGLDDDAFTETTPYNPSSPYS-ASKAASDLL 162

Length = 340

>gnl|CDD|187549 cd05238, Gne_like_SDR_e, Escherichia coli Gne (a nucleoside-diphosphate-sugar 4-epimerase)-like, extended (e) SDRs

 Score = 85.5 bits (212), Expect = 1e-19
 Identities = 48/169 (28%), Positives = 77/169 (45%), Gaps = 19/169 (11%)

Query: 72  HVLVTGGAGYIGSHAALRLLKDS--YRVTIVDNLSRGNIGAVKVLQELFP-EPGRLQFIY 128
            VL+TG +G++G   A RLL D    R+ ++D           V+    P    R+  I 
Sbjct: 2   KVLITGASGFVGQRLAERLLSDVPNERLILID-----------VVSPKAPSGAPRVTQIA 50

Query: 129 ADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYH-NITSNTLVVLESMARHG 187
            DL     +    +    D V H AA+   G +  D    Y  N+   T  +LE++ ++G
Sbjct: 51  GDLAVPALIEALANGRP-DVVFHLAAI-VSGGAEADFDLGYRVNVDG-TRNLLEALRKNG 107

Query: 188 VDT-LIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFS 235
                +++S+ A YG P   P+T+ T   P + YG  K M E ++ D+S
Sbjct: 108 PKPRFVFTSSLAVYGLPLPNPVTDHTALDPASSYGAQKAMCELLLNDYS 156

Nucleoside-diphosphate-sugar 4-epimerase has the characteristic active site tetrad and NAD-binding motif of the extended SDR, and is related to more specifically defined epimerases such as UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), which catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup includes Escherichia coli 055:H7 Gne, a UDP-GlcNAc 4-epimerase, essential for O55 antigen synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305

>gnl|CDD|187574 cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase (G4E), subgroup 5, extended (e) SDRs

 Score = 82.8 bits (205), Expect = 1e-18
 Identities = 47/161 (29%), Positives = 76/161 (47%), Gaps = 15/161 (9%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           VL+ GG G+IGSH    LL++  +V +     R       +     P  G + +I  D  
Sbjct: 2   VLIVGGNGFIGSHLVDALLEEGPQVRV---FDR------SIPPYELPLGG-VDYIKGDYE 51

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDP-LKYYHNITSNTLVVLESMARHGVDTL 191
           +   +         D V+H A+      S  +P L    N+   T+ +LE+ A  G+  +
Sbjct: 52  NRADLESALVG--IDTVIHLASTTNPATSNKNPILDIQTNVAP-TVQLLEACAAAGIGKI 108

Query: 192 IYSSTCAT-YGEPEKMPITEETPQAPINPYGKAKKMAEDII 231
           I++S+  T YG PE++PI+E  P  PI+ YG +K   E  +
Sbjct: 109 IFASSGGTVYGVPEQLPISESDPTLPISSYGISKLAIEKYL 149

This subgroup partially conserves the characteristic active site tetrad and NAD-binding motif of the extended SDRs, and has been identified as possible UDP-glucose 4-epimerase (aka UDP-galactose 4-epimerase), a homodimeric member of the extended SDR family. UDP-glucose 4-epimerase catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 300

>gnl|CDD|187568 cd05258, CDP_TE_SDR_e, CDP-tyvelose 2-epimerase, extended (e) SDRs

 Score = 80.4 bits (199), Expect = 1e-17
 Identities = 54/191 (28%), Positives = 86/191 (45%), Gaps = 38/191 (19%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSR----GNIGAVKVLQELFPEPGRLQFIY 128
           VL+TGGAG+IGS+ A   LK  + V   DNL R    GN+  +K  +E     G ++F++
Sbjct: 3   VLITGGAGFIGSNLARFFLKQGWEVIGFDNLMRRGSFGNLAWLKANRED----GGVRFVH 58

Query: 129 ADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSN---TLVVLESMAR 185
            D+ +   +   F +   D ++H AA   V  S   P     +  +N   TL VLE+  +
Sbjct: 59  GDIRNRNDLEDLFED--IDLIIHTAAQPSVTTSASSP---RLDFETNALGTLNVLEAARQ 113

Query: 186 HGVDT-LIYSSTCATYG-EPEKMP-------------------ITEETP-QAPINPYGKA 223
           H  +   I++ST   YG  P  +P                   I+E  P     + YG +
Sbjct: 114 HAPNAPFIFTSTNKVYGDLPNYLPLEELETRYELAPEGWSPAGISESFPLDFSHSLYGAS 173

Query: 224 KKMAEDIILDF 234
           K  A+  + ++
Sbjct: 174 KGAADQYVQEY 184

CDP-tyvelose 2-epimerase is a tetrameric SDR that catalyzes the conversion of CDP-D-paratose to CDP-D-tyvelose, the last step in tyvelose biosynthesis. This subgroup is a member of the extended SDR subfamily, with a characteristic active site tetrad and NAD-binding motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 337

>gnl|CDD|187541 cd05230, UGD_SDR_e, UDP-glucuronate decarboxylase (UGD) and related proteins, extended (e) SDRs

 Score = 78.4 bits (194), Expect = 4e-17
 Identities = 50/173 (28%), Positives = 76/173 (43%), Gaps = 23/173 (13%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRG---NIGAVKVLQELFPEPGRLQFIYA 129
           +L+TGGAG++GSH   RLL+D + V  VDN   G   NI      + L   P   +FI  
Sbjct: 3   ILITGGAGFLGSHLCDRLLEDGHEVICVDNFFTGRKRNI------EHLIGHP-NFEFIRH 55

Query: 130 DLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD 189
           D+ +             D + H A  A       +P+K        TL +L    R G  
Sbjct: 56  DVTE-------PLYLEVDQIYHLACPASPVHYQYNPIKTLKTNVLGTLNMLGLAKRVGA- 107

Query: 190 TLIYSSTCATYGEPEKMPITEE-----TPQAPINPYGKAKKMAEDIILDFSKN 237
            ++ +ST   YG+PE  P  E       P  P + Y + K++AE + + + + 
Sbjct: 108 RVLLASTSEVYGDPEVHPQPESYWGNVNPIGPRSCYDEGKRVAETLCMAYHRQ 160

UGD catalyzes the formation of UDP-xylose from UDP-glucuronate; it is an extended-SDR, and has the characteristic glycine-rich NAD-binding pattern, TGXXGXXG, and active site tetrad. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305

>gnl|CDD|187538 cd05227, AR_SDR_e, aldehyde reductase, extended (e) SDRs

 Score = 78.5 bits (194), Expect = 4e-17
 Identities = 51/193 (26%), Positives = 76/193 (39%), Gaps = 47/193 (24%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRV-TIVDNLSRGNIGAVKVLQELFPE---PGRLQFIY 128
           VLVTG  G+I SH   +LLK  Y+V   V +LS+        L+ L        RL+F+ 
Sbjct: 2   VLVTGATGFIASHIVEQLLKAGYKVRGTVRSLSK-----SAKLKALLKAAGYNDRLEFVI 56

Query: 129 ADLGDAKAVNKFFSENAFD-------AVMHFA-AVAYVG----ESTLDPLKYYHNITSNT 176
            D           + NA+D        V+H A    + G    +  +DP       T N 
Sbjct: 57  VDD--------LTAPNAWDEALKGVDYVIHVASPFPFTGPDAEDDVIDPAV---EGTLN- 104

Query: 177 LVVLESMARHG-VDTLIYSSTCA----TYGEPEKMPITEE-------TPQAPINPYGKAK 224
             VLE+    G V  ++ +S+ A       E      TEE       +    ++ Y  +K
Sbjct: 105 --VLEAAKAAGSVKRVVLTSSVAAVGDPTAEDPGKVFTEEDWNDLTISKSNGLDAYIASK 162

Query: 225 KMAEDIILDFSKN 237
            +AE    +F K 
Sbjct: 163 TLAEKAAWEFVKE 175

This subgroup contains aldehyde reductase of the extended SDR-type and related proteins. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 301

>gnl|CDD|187543 cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase, subgroup 4, extended (e) SDRs

 Score = 78.2 bits (193), Expect = 4e-17
 Identities = 52/174 (29%), Positives = 74/174 (42%), Gaps = 20/174 (11%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           VLVTG  G+IG     +LL     V I          AV+  +   P         A+L 
Sbjct: 2   VLVTGANGFIGRALVDKLLSRGEEVRI----------AVRNAENAEPSVVL-----AELP 46

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYV-GESTLDPLKYYHNI-TSNTLVVLESMARHGVDT 190
           D  +    F     DAV+H AA  +V  +   DPL  Y  + T  T  +  + AR GV  
Sbjct: 47  DIDSFTDLFLG--VDAVVHLAARVHVMNDQGADPLSDYRKVNTELTRRLARAAARQGVKR 104

Query: 191 LIYSSTCATYGEP-EKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVL 243
            ++ S+    GE     P  E  P AP + YG++K  AE  +L+   +  M V+
Sbjct: 105 FVFLSSVKVNGEGTVGAPFDETDPPAPQDAYGRSKLEAERALLELGASDGMEVV 158

UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of bacterial proteins, and includes the Staphylococcus aureus capsular polysaccharide Cap5N, which may have a role in the synthesis of UDP-N-acetyl-d-fucosamine. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 303

>gnl|CDD|187548 cd05237, UDP_invert_4-6DH_SDR_e, UDP-Glcnac (UDP-linked N-acetylglucosamine) inverting 4,6-dehydratase, extended (e) SDRs

 Score = 77.7 bits (192), Expect = 6e-17
 Identities = 49/179 (27%), Positives = 81/179 (45%), Gaps = 20/179 (11%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQEL---FPEPGRLQFIYA 129
           +LVTGGAG IGS    ++LK   +  IV    R      ++++EL   FP   +L+FI  
Sbjct: 5   ILVTGGAGSIGSELVRQILKFGPKKLIV--FDRDENKLHELVRELRSRFPHD-KLRFIIG 61

Query: 130 DLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD 189
           D+ D + + + F E   D V H AA+ +V     +P +        T  V+++   +GV+
Sbjct: 62  DVRDKERLRRAFKERGPDIVFHAAALKHVPSMEDNPEEAIKTNVLGTKNVIDAAIENGVE 121

Query: 190 TLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVLQCHRF 248
             +  ST              +    P+N  G  K++AE ++L  ++ S        RF
Sbjct: 122 KFVCIST--------------DKAVNPVNVMGATKRVAEKLLLAKNEYSSSTKFSTVRF 166

UDP-Glcnac inverting 4,6-dehydratase was identified in Helicobacter pylori as the hexameric flaA1 gene product (FlaA1). FlaA1 is hexameric, possesses UDP-GlcNAc-inverting 4,6-dehydratase activity, and catalyzes the first step in the creation of a pseudaminic acid derivative in protein glycosylation. Although this subgroup has the NADP-binding motif characteristic of extended SDRs, its members tend to have a Met substituted for the active site Tyr found in most SDR families. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 287

>gnl|CDD|187539 cd05228, AR_FR_like_1_SDR_e, uncharacterized subgroup of aldehyde reductase and flavonoid reductase related proteins, extended (e) SDRs

 Score = 77.7 bits (192), Expect = 9e-17
 Identities = 46/168 (27%), Positives = 70/168 (41%), Gaps = 16/168 (9%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           +LVTG  G++GS+    LL   YRV     L R    +      L   P  ++ +  DL 
Sbjct: 1   ILVTGATGFLGSNLVRALLAQGYRVRA---LVR----SGSDAVLLDGLP--VEVVEGDLT 51

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
           DA ++         D V H AA         D  + Y      T  VL++    GV  ++
Sbjct: 52  DAASLAAAMKG--CDRVFHLAAFTS--LWAKDRKELYRTNVEGTRNVLDAALEAGVRRVV 107

Query: 193 YSSTCATYGEPEKMPITEETPQAPI---NPYGKAKKMAEDIILDFSKN 237
           ++S+ A  G P    I E TP       N Y ++K +AE  +L+ +  
Sbjct: 108 HTSSIAALGGPPDGRIDETTPWNERPFPNDYYRSKLLAELEVLEAAAE 155

This subgroup contains proteins of unknown function related to aldehyde reductase and flavonoid reductase of the extended SDR-type. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 318

>gnl|CDD|187660 cd08957, WbmH_like_SDR_e, Bordetella bronchiseptica enzymes WbmH and WbmG-like, extended (e) SDRs

 Score = 77.5 bits (191), Expect = 1e-16
 Identities = 53/165 (32%), Positives = 80/165 (48%), Gaps = 18/165 (10%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           VL+TGGAG IGSH    LL+  ++V ++DN + G        +E  P+   L  +   + 
Sbjct: 3   VLITGGAGQIGSHLIEHLLERGHQVVVIDNFATGR-------REHLPDHPNLTVVEGSIA 55

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSN---TLVVLESMARHGVD 189
           D   V+K F +   DAV+H  A AY      DP  +Y +  +N      V+++  + GV 
Sbjct: 56  DKALVDKLFGDFKPDAVVH-TAAAYK-----DPDDWYEDTLTNVVGGANVVQAAKKAGVK 109

Query: 190 TLIYSSTCATYG-EPEKMPITEETPQAPIN-PYGKAKKMAEDIIL 232
            LIY  T   YG +P + PI  + P+AP    Y  +K   E  + 
Sbjct: 110 RLIYFQTALCYGLKPMQQPIRLDHPRAPPGSSYAISKTAGEYYLE 154

Bordetella bronchiseptica enzymes WbmH and WbmG, and related proteins. This subgroup exhibits the active site tetrad and NAD-binding motif of the extended SDR family. It has been proposed that the active site in Bordetella WbmG and WbmH cannot function as an epimerase, and that it plays a role in O-antigen synthesis pathway from UDP-2,3-diacetamido-2,3-dideoxy-l-galacturonic acid. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 307

>gnl|CDD|215146 PLN02260, PLN02260, probable rhamnose biosynthetic enzyme

 Score = 78.2 bits (193), Expect = 1e-16
 Identities = 51/179 (28%), Positives = 85/179 (47%), Gaps = 13/179 (7%)

Query: 73  VLVTGGAGYIGSHAALRLLKD--SYRVTIVDNLSRGNIGAVKVLQELFPEPG--RLQFIY 128
           +L+TG AG+I SH A RL+++   Y++ ++D L          L+ L P       +F+ 
Sbjct: 9   ILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDY-----CSNLKNLNPSKSSPNFKFVK 63

Query: 129 ADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHG- 187
            D+  A  VN        D +MHFAA  +V  S  +  ++  N    T V+LE+    G 
Sbjct: 64  GDIASADLVNYLLITEGIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQ 123

Query: 188 VDTLIYSSTCATYGEPEKMPIT---EETPQAPINPYGKAKKMAEDIILDFSKNSDMAVL 243
           +   I+ ST   YGE ++       E +   P NPY   K  AE +++ + ++  + V+
Sbjct: 124 IRRFIHVSTDEVYGETDEDADVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVI 182

Length = 668

>gnl|CDD|200431 TIGR04180, EDH_00030, NAD dependent epimerase/dehydratase, LLPSF_EDH_00030 family

 Score = 74.6 bits (184), Expect = 8e-16
 Identities = 54/173 (31%), Positives = 86/173 (49%), Gaps = 9/173 (5%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVT-IVDNLSRGNIGAVKVLQELFPE-PGRLQFIYAD 130
           VLVTG  G+IGSH    L++  Y V   V   S  + G    L    PE   +++ +  D
Sbjct: 1   VLVTGADGFIGSHLVEALVRQGYEVRAFVLYNSFNSWGW---LDTSPPEVKDKIEVVTGD 57

Query: 131 LGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYH-NITSNTLVVLESMARHGVD 189
           + D  +V K  +    D V H AA+  +  S + P  Y   N+T  TL VL++    GV+
Sbjct: 58  IRDPDSVRK--AMKGCDVVFHLAALIAIPYSYIAPDSYVDTNVTG-TLNVLQAARDLGVE 114

Query: 190 TLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAV 242
            ++++ST   YG  + +PI E+ P    +PY  +K  A+ + L F ++ +  V
Sbjct: 115 KVVHTSTSEVYGTAQYVPIDEKHPLQGQSPYSASKIGADQLALSFYRSFNTPV 167

This clade within the NAD dependent epimerase/dehydratase superfamily (pfam01370) is characterized by inclusion of its members within a cassette of seven distinctive enzymes. These include four genes homologous to the elements of the neuraminic (sialic) acid biosynthesis cluster (NeuABCD), an aminotransferase and a nucleotidyltransferase in addition to the epimerase/dehydratase. Together it is very likely that these enzymes direct the biosynthesis of a nine-carbon sugar analagous to CMP-neuraminic acid. These seven genes form the core of the cassette, although they are often accompanied by additional genes that may further modify the product sugar. Although this cassette is widely distributed in bacteria, the family nomenclature arises from the instance in Leptospira interrogans serovar Lai, str. 56601, where it appears as the 30th gene in the 91-gene lipopolysaccharide biosynthesis cluster. Length = 297

>gnl|CDD|187581 cd05273, GME-like_SDR_e, Arabidopsis thaliana GDP-mannose-3',5'-epimerase (GME)-like, extended (e) SDRs

 Score = 66.7 bits (163), Expect = 6e-13
 Identities = 44/184 (23%), Positives = 75/184 (40%), Gaps = 31/184 (16%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            LVTG  G+IGSH A RL  + + V   D  S  ++       E         F   DL 
Sbjct: 3   ALVTGAGGFIGSHLAERLKAEGHYVRGADWKSPEHMTQPTDDDE---------FHLVDLR 53

Query: 133 DAKAVNKFFSENAFDAVMHFAA----VAYVGESTLDPLKYYHNITSNTLV---VLESMAR 185
           + +   K       D V H AA    + Y+  +      +   + +NTL+   +LE+   
Sbjct: 54  EMENCLKATEG--VDHVFHLAADMGGMGYIQSN------HAVIMYNNTLINFNMLEAARI 105

Query: 186 HGVDTLIYSSTCATYG-----EPEKMPITEE--TPQAPINPYGKAKKMAEDIILDFSKNS 238
           +GV+  +++S+   Y      E   + + EE   P  P + YG  K   E +   ++++ 
Sbjct: 106 NGVERFLFASSACVYPEFKQLETTVVRLREEDAWPAEPQDAYGWEKLATERLCQHYNEDY 165

Query: 239 DMAV 242
            +  
Sbjct: 166 GIET 169

This subgroup of NDP-sugar epimerase/dehydratases are extended SDRs; they have the characteristic active site tetrad, and an NAD-binding motif: TGXXGXX[AG], which is a close match to the canonical NAD-binding motif. Members include Arabidopsis thaliana GDP-mannose-3',5'-epimerase (GME) which catalyzes the epimerization of two positions of GDP-alpha-D-mannose to form GDP-beta-L-galactose. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 328

>gnl|CDD|224014 COG1089, Gmd, GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

 Score = 65.5 bits (160), Expect = 2e-12
 Identities = 48/155 (30%), Positives = 69/155 (44%), Gaps = 5/155 (3%)

Query: 74  LVTGGAGYIGSHAALRLLKDSYRVT-IVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           L+TG  G  GS+ A  LL+  Y V  I    S  N   + + ++      RL   Y DL 
Sbjct: 6   LITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLT 65

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARH--GVDT 190
           D+  + +   E   D + + AA ++VG S   P          TL +LE++ R      T
Sbjct: 66  DSSNLLRILEEVQPDEIYNLAAQSHVGVSFEQPEYTADVDAIGTLRLLEAI-RILGEKKT 124

Query: 191 LIYS-STCATYGEPEKMPITEETPQAPINPYGKAK 224
             Y  ST   YG  +++P  E TP  P +PY  AK
Sbjct: 125 RFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAK 159

Length = 345

>gnl|CDD|236649 PRK10084, PRK10084, dTDP-glucose 4,6 dehydratase; Provisional

 Score = 64.0 bits (156), Expect = 6e-12
 Identities = 53/174 (30%), Positives = 86/174 (49%), Gaps = 27/174 (15%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLS-RGNIGAVKVLQELFPEPGRLQFIYAD 130
           +LVTGGAG+IGS     ++ ++   V  VD L+  GN+ ++  + +      R  F +AD
Sbjct: 3   ILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSD----SERYVFEHAD 58

Query: 131 LGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDT 190
           + D   +++ F+++  DAVMH AA ++V  S   P  +       T V+LE+ AR+    
Sbjct: 59  ICDRAELDRIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEA-ARNYWSA 117

Query: 191 LI----------YSSTCATYGE---------PEKMPI-TEETPQAPINPYGKAK 224
           L           + ST   YG+          E++P+ TE T  AP +PY  +K
Sbjct: 118 LDEDKKNAFRFHHISTDEVYGDLPHPDEVENSEELPLFTETTAYAPSSPYSASK 171

Length = 352

>gnl|CDD|233775 TIGR02197, heptose_epim, ADP-L-glycero-D-manno-heptose-6-epimerase

 Score = 63.1 bits (154), Expect = 1e-11
 Identities = 39/162 (24%), Positives = 65/162 (40%), Gaps = 26/162 (16%)

Query: 73  VLVTGGAGYIGSHAALRL----LKDSYRVTIVDNLSRG--NIGAVKVLQELFPEPGRLQF 126
           ++VTGGAG+IGS+    L    + D   + +VDNL  G   +                  
Sbjct: 1   IIVTGGAGFIGSNLVKALNERGITD---ILVVDNLRDGHKFLNLAD------------LV 45

Query: 127 IYADLGDAKAVNKFFSENA--FDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMA 184
           I   +     +++         +A+ H  A +   E   D      N    +  +L+  A
Sbjct: 46  IADYIDKEDFLDRLEKGAFGKIEAIFHQGACSDTTE--TDGEYMMENNYQYSKRLLDWCA 103

Query: 185 RHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKM 226
             G+   IY+S+ ATYG+ E         + P+N YG +K +
Sbjct: 104 EKGI-PFIYASSAATYGDGEAGFREGRELERPLNVYGYSKFL 144

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370) [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 314

>gnl|CDD|163279 TIGR03466, HpnA, hopanoid-associated sugar epimerase

 Score = 62.3 bits (152), Expect = 2e-11
 Identities = 44/176 (25%), Positives = 73/176 (41%), Gaps = 21/176 (11%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYAD 130
           VLVTG  G++GS     LL+     RV +     R N+  + V           + +  D
Sbjct: 3   VLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNLEGLDV-----------EIVEGD 51

Query: 131 LGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDT 190
           L D  ++ K  +     A+ H AA   +     DP + Y      T  +L +    GV+ 
Sbjct: 52  LRDPASLRKAVA--GCRALFHVAADYRLW--APDPEEMYAANVEGTRNLLRAALEAGVER 107

Query: 191 LIYSSTCATYGEPEKMPITEETPQAP----INPYGKAKKMAEDIILDFSKNSDMAV 242
           ++Y+S+ AT G        +ET  +     I  Y ++K +AE   L+ +    + V
Sbjct: 108 VVYTSSVATLGVRGDGTPADETTPSSLDDMIGHYKRSKFLAEQAALEMAAEKGLPV 163

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. This gene and its association with hopene biosynthesis in Zymomonas mobilis has been noted in the literature where the gene symbol hpnA was assigned. Hopanoids are known to be components of the plasma membrane and to have polar sugar head groups in Z. mobilis and other species. Length = 328

>gnl|CDD|182313 PRK10217, PRK10217, dTDP-glucose 4,6-dehydratase; Provisional

 Score = 62.7 bits (152), Expect = 2e-11
 Identities = 52/175 (29%), Positives = 81/175 (46%), Gaps = 23/175 (13%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLS-RGNIGAVKVLQELFP--EPGRLQFIY 128
           +L+TGGAG+IGS     ++ ++   V +VD L+  GN      L  L P  +  R  F  
Sbjct: 4   ILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGN------LMSLAPVAQSERFAFEK 57

Query: 129 ADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV 188
            D+ D   + + F+E+  D VMH AA ++V  S   P  +       T  +LE+ AR   
Sbjct: 58  VDICDRAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEA-ARAYW 116

Query: 189 DTLI----------YSSTCATYGEPEKMP--ITEETPQAPINPYGKAKKMAEDII 231
           + L           + ST   YG+        TE TP AP +PY  +K  ++ ++
Sbjct: 117 NALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLV 171

Length = 355

>gnl|CDD|187537 cd05226, SDR_e_a, Extended (e) and atypical (a) SDRs

 Score = 60.5 bits (147), Expect = 2e-11
 Identities = 39/166 (23%), Positives = 64/166 (38%), Gaps = 28/166 (16%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           +L+ G  G+IG   A  LL+  + VT++   ++        L +   EP  +     DL 
Sbjct: 1   ILILGATGFIGRALARELLEQGHEVTLLVRNTKR-------LSKEDQEPVAVVEG--DLR 51

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSN---TLVVLESMARHGVD 189
           D  +++        D V+H A                     +   T  VLE+    GV 
Sbjct: 52  DLDSLSDAVQGV--DVVIHLAGAPRDTR---------DFCEVDVEGTRNVLEAAKEAGVK 100

Query: 190 TLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFS 235
             I+ S+   YG+       EET  +P +PY   K   E ++ + S
Sbjct: 101 HFIFISSLGAYGDL-----HEETEPSPSSPYLAVKAKTEAVLREAS 141

Extended or atypical short-chain dehydrogenases/reductases (SDRs, aka tyrosine-dependent oxidoreductases) are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 176

>gnl|CDD|187551 cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase (G4E), subgroup 3, extended (e) SDRs

 Score = 60.5 bits (147), Expect = 7e-11
 Identities = 42/143 (29%), Positives = 65/143 (45%), Gaps = 16/143 (11%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           +LVTG AG +G     R L  S RV  VD L R               P +++++  D+ 
Sbjct: 1   ILVTGAAGGLG-RLLARRLAASPRVIGVDGLDRRRPP---------GSPPKVEYVRLDIR 50

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
           D  A +  F E   DAV+H A +  +        ++  N+   T  VL++ A  GV  ++
Sbjct: 51  DPAAADV-FREREADAVVHLAFI--LDPPRDGAERHRINVDG-TQNVLDACAAAGVPRVV 106

Query: 193 YSSTCATYG--EPEKMPITEETP 213
            +S+ A YG       P+TE+ P
Sbjct: 107 VTSSVAVYGAHPDNPAPLTEDAP 129

Members of this bacterial subgroup are identified as possible sugar epimerases, such as UDP-glucose 4 epimerase. However, while the NAD(P)-binding motif is fairly well conserved, not all members retain the canonical active site tetrad of the extended SDRs. UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 306

>gnl|CDD|224011 COG1086, COG1086, Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 59.6 bits (145), Expect = 3e-10
 Identities = 47/174 (27%), Positives = 75/174 (43%), Gaps = 30/174 (17%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAV-KVLQELFPEPGRLQFIYADL 131
           VLVTGG G IGS    ++LK + +  I+ +     +  +   L+E FPE  +L+F   D+
Sbjct: 253 VLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPEL-KLRFYIGDV 311

Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYH-------NITSNTLVVLESMA 184
            D   V +    +  D V H AA+ +V      PL  Y+       N+   T  V E+  
Sbjct: 312 RDRDRVERAMEGHKVDIVFHAAALKHV------PLVEYNPEEAIKTNVLG-TENVAEAAI 364

Query: 185 RHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNS 238
           ++GV   +  ST              +    P N  G  K++AE +    ++N 
Sbjct: 365 KNGVKKFVLIST--------------DKAVNPTNVMGATKRLAEKLFQAANRNV 404

Length = 588

>gnl|CDD|187565 cd05255, SQD1_like_SDR_e, UDP_sulfoquinovose_synthase (Arabidopsis thaliana SQD1 and related proteins), extended (e) SDRs

 Score = 59.3 bits (144), Expect = 3e-10
 Identities = 49/156 (31%), Positives = 65/156 (41%), Gaps = 19/156 (12%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPG---RLQ---- 125
           VL+ GG GY G   AL L K  + V IVDNL R  I     L+ L P      RL+    
Sbjct: 3   VLILGGDGYCGWPTALHLSKRGHEVCIVDNLVRRRIDVELGLESLTPIASIHERLRAWKE 62

Query: 126 -------FIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLD-PLKYY--HNITSN 175
                  F   D  D + + +  + +  DAV+HFA       S +D     Y  HN    
Sbjct: 63  LTGKTIEFYVGDACDYEFLAELLASHEPDAVVHFAEQRSAPYSMIDREHANYTQHNNVIG 122

Query: 176 TLVVLESMARHGVDT-LIYSSTCATYGEPEKMPITE 210
           TL +L ++     D  L+   T   YG P  + I E
Sbjct: 123 TLNLLFAIKEFDPDCHLVKLGTMGEYGTPN-IDIPE 157

Arabidopsis thaliana UDP-sulfoquinovose-synthase ( SQD1), an extended SDR, catalyzes the transfer of SO(3)(-) to UDP-glucose in the biosynthesis of plant sulfolipids. Members of this subgroup share the conserved SDR catalytic residues, and a partial match to the characteristic extended-SDR NAD-binding motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 382

>gnl|CDD|165812 PLN02166, PLN02166, dTDP-glucose 4,6-dehydratase

 Score = 57.7 bits (139), Expect = 9e-10
 Identities = 51/176 (28%), Positives = 80/176 (45%), Gaps = 19/176 (10%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           ++VTGGAG++GSH   +L+     V ++DN   G     + L  LF  P R + I  D+ 
Sbjct: 123 IVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGR---KENLVHLFGNP-RFELIRHDV- 177

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
               V     E   D + H A  A       +P+K        TL +L    R G   L+
Sbjct: 178 ----VEPILLE--VDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGARFLL 231

Query: 193 YSSTCATYGEPEKMPITEETPQAPINP------YGKAKKMAEDIILDFSKNSDMAV 242
            +ST   YG+P + P  +ET    +NP      Y + K+ AE + +D+ + + + V
Sbjct: 232 -TSTSEVYGDPLEHP-QKETYWGNVNPIGERSCYDEGKRTAETLAMDYHRGAGVEV 285

Length = 436

>gnl|CDD|187575 cd05265, SDR_a1, atypical (a) SDRs, subgroup 1

 Score = 56.5 bits (137), Expect = 1e-09
 Identities = 38/169 (22%), Positives = 64/169 (37%), Gaps = 37/169 (21%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           +L+ GG  +IG      LL   + VT+    +RG              P  ++ I  D  
Sbjct: 3   ILIIGGTRFIGKALVEELLAAGHDVTV---FNRGRTKP--------DLPEGVEHIVGDRN 51

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
           D  A+ +      FD V+    +AY                      L++     V   I
Sbjct: 52  DRDALEELLGGEDFDVVVDT--IAYTPRQVER--------------ALDAFKGR-VKQYI 94

Query: 193 YSSTCATYGEPEKMPITEETP--------QAPINPYGKAKKMAEDIILD 233
           + S+ + Y +P +  ITE TP         +    YG+ K+ AED++++
Sbjct: 95  FISSASVYLKPGR-VITESTPLREPDAVGLSDPWDYGRGKRAAEDVLIE 142

Atypical SDRs in this subgroup are poorly defined and have been identified putatively as isoflavones reductase, sugar dehydratase, mRNA binding protein etc. Atypical SDRs are distinct from classical SDRs. Members of this subgroup retain the canonical active site triad (though not the upstream Asn found in most SDRs) but have an unusual putative glycine-rich NAD(P)-binding motif, GGXXXXG, in the usual location. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 250

>gnl|CDD|187536 cd05193, AR_like_SDR_e, aldehyde reductase, flavonoid reductase, and related proteins, extended (e) SDRs

 Score = 56.5 bits (136), Expect = 2e-09
 Identities = 47/179 (26%), Positives = 78/179 (43%), Gaps = 21/179 (11%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRV-TIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
           VLVTG +G++ SH   +LL+  Y+V   V + S   +  V  L +L  +PGRL+   ADL
Sbjct: 1   VLVTGASGFVASHVVEQLLERGYKVRATVRDPS--KVKKVNHLLDLDAKPGRLELAVADL 58

Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHG-VDT 190
            D ++ ++     A   V H A    V  S+ DP +        TL  L++ A    V  
Sbjct: 59  TDEQSFDEVIKGCAG--VFHVATP--VSFSSKDPNEVIKPAIGGTLNALKAAAAAKSVKR 114

Query: 191 LIYSSTCATYGEPE---KMPITEE----------TPQAPINPYGKAKKMAEDIILDFSK 236
            + +S+  +   P+   +  + +E           P+     Y  +K +AE     F+ 
Sbjct: 115 FVLTSSAGSVLIPKPNVEGIVLDEKSWNLEEFDSDPKKSAWVYAASKTLAEKAAWKFAD 173

This subgroup contains aldehyde reductase and flavonoid reductase of the extended SDR-type and related proteins. Proteins in this subgroup have a complete SDR-type active site tetrad and a close match to the canonical extended SDR NADP-binding motif. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 295

>gnl|CDD|187673 cd09813, 3b-HSD-NSDHL-like_SDR_e, human NSDHL (NAD(P)H steroid dehydrogenase-like protein)-like, extended (e) SDRs

 Score = 56.6 bits (137), Expect = 2e-09
 Identities = 43/168 (25%), Positives = 71/168 (42%), Gaps = 24/168 (14%)

Query: 73  VLVTGGAGYIGSHAALRLLKDS-YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
            LV GG+G++G H   +LL+     V + D             +      GR+QF   DL
Sbjct: 2   CLVVGGSGFLGRHLVEQLLRRGNPTVHVFD--------IRPTFELDPSSSGRVQFHTGDL 53

Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTL 191
            D + + K F+E   + V H A+         +   YY      T  V+E+  + GV  L
Sbjct: 54  TDPQDLEKAFNEKGPNVVFHTASPD----HGSNDDLYYKVNVQGTRNVIEACRKCGVKKL 109

Query: 192 IYSSTCATY--GEP-----EKMPITEETPQAPINPYGKAKKMAEDIIL 232
           +Y+S+ +    G+      E +P     P    + Y + K +AE ++L
Sbjct: 110 VYTSSASVVFNGQDIINGDESLPY----PDKHQDAYNETKALAEKLVL 153

This subgroup includes human NSDHL and related proteins. These proteins have the characteristic active site tetrad of extended SDRs, and also have a close match to their NAD(P)-binding motif. Human NSDHL is a 3beta-hydroxysteroid dehydrogenase (3 beta-HSD) which functions in the cholesterol biosynthetic pathway. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. Mutations in the gene encoding NSDHL cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. This subgroup also includes an unusual bifunctional [3beta-hydroxysteroid dehydrogenase (3b-HSD)/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 335

>gnl|CDD|224016 COG1091, RfbD, dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

 Score = 56.5 bits (137), Expect = 2e-09
 Identities = 35/168 (20%), Positives = 60/168 (35%), Gaps = 28/168 (16%)

Query: 72  HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
            +L+TG  G +G+    R L   + V       R  +                     D+
Sbjct: 2   KILITGANGQLGTELR-RALPGEFEVIA---TDRAEL---------------------DI 36

Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYH-NITSNTLVVLESMARHGVDT 190
            D  AV +   E   D V++ AA   V ++  +P   +  N T     +  + A  G   
Sbjct: 37  TDPDAVLEVIRETRPDVVINAAAYTAVDKAESEPELAFAVNATG-AENLARAAAEVGA-R 94

Query: 191 LIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNS 238
           L++ ST   +   +  P  E     P+N YG++K   E+ +       
Sbjct: 95  LVHISTDYVFDGEKGGPYKETDTPNPLNVYGRSKLAGEEAVRAAGPRH 142

Length = 281

>gnl|CDD|187559 cd05248, ADP_GME_SDR_e, ADP-L-glycero-D-mannoheptose 6-epimerase (GME), extended (e) SDRs

 Score = 56.2 bits (136), Expect = 2e-09
 Identities = 42/176 (23%), Positives = 65/176 (36%), Gaps = 19/176 (10%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
           ++VTGGAG+IGS+    L +     + +VDNLS G      V  ++     +  F     
Sbjct: 2   IIVTGGAGFIGSNLVKALNERGITDILVVDNLSNGEKFKNLVGLKIADYIDKDDFK---- 57

Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYY---HNITSNTLVVLESMARHGV 188
                V K       +A+ H  A +     T +    Y   +N    T  +L       +
Sbjct: 58  ---DWVRKGDENFKIEAIFHQGACS----DTTETDGKYMMDNNYQY-TKELLHYCLEKKI 109

Query: 189 DTLIYSSTCATYG--EPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAV 242
              IY+S+ A YG          E     P+N YG +K + +       K     V
Sbjct: 110 -RFIYASSAAVYGNGSLGFAEDIETPNLRPLNVYGYSKLLFDQWARRHGKEVLSQV 164

This subgroup contains ADP-L-glycero-D-mannoheptose 6-epimerase, an extended SDR, which catalyzes the NAD-dependent interconversion of ADP-D-glycero-D-mannoheptose and ADP-L-glycero-D-mannoheptose. This subgroup has the canonical active site tetrad and NAD(P)-binding motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 317

>gnl|CDD|187564 cd05254, dTDP_HR_like_SDR_e, dTDP-6-deoxy-L-lyxo-4-hexulose reductase and related proteins, extended (e) SDRs

 Score = 56.1 bits (136), Expect = 2e-09
 Identities = 40/170 (23%), Positives = 61/170 (35%), Gaps = 29/170 (17%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           +L+TG  G +G      L +  Y V       R      K+                DL 
Sbjct: 2   ILITGATGMLGRALVRLLKERGYEVI---GTGRSRASLFKL----------------DLT 42

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSN---TLVVLESMARHGVD 189
           D  AV +   +   D +++ AA   V +   DP         N      +  +    G  
Sbjct: 43  DPDAVEEAIRDYKPDVIINCAAYTRVDKCESDPEL---AYRVNVLAPENLARAAKEVGA- 98

Query: 190 TLIYSST-CATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNS 238
            LI+ ST     G+  K P  EE    P+N YGK+K + E  +L+ +   
Sbjct: 99  RLIHISTDYVFDGK--KGPYKEEDAPNPLNVYGKSKLLGEVAVLNANPRY 146

dTDP-6-deoxy-L-lyxo-4-hexulose reductase, an extended SDR, synthesizes dTDP-L-rhamnose from alpha-D-glucose-1-phosphate, providing the precursor of L-rhamnose, an essential cell wall component of many pathogenic bacteria. This subgroup has the characteristic active site tetrad and NADP-binding motif. This subgroup also contains human MAT2B, the regulatory subunit of methionine adenosyltransferase (MAT); MAT catalyzes S-adenosylmethionine synthesis. The human gene encoding MAT2B encodes two major splicing variants which are induced in human cell liver cancer and regulate HuR, an mRNA-binding protein which stabilizes the mRNA of several cyclins, to affect cell proliferation. Both MAT2B variants include this extended SDR domain. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 280

>gnl|CDD|187550 cd05239, GDP_FS_SDR_e, GDP-fucose synthetase, extended (e) SDRs

 Score = 55.7 bits (135), Expect = 3e-09
 Identities = 44/164 (26%), Positives = 65/164 (39%), Gaps = 37/164 (22%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           +LVTG  G +GS     L +  Y   +    +          +EL            DL 
Sbjct: 2   ILVTGHRGLVGSAIVRVLARRGYENVVF--RTS---------KEL------------DLT 38

Query: 133 DAKAVNKFFSENAFDAVMHFAA-VAYVGESTLDPLKYYHNITSNTLV---VLESMARHGV 188
           D +AV  FF +   D V+H AA V  +  +   P  +  +   N L+   V+ +  R GV
Sbjct: 39  DQEAVRAFFEKEKPDYVIHLAAKVGGIVANMTYPADFLRD---NLLINDNVIHAAHRFGV 95

Query: 189 DTLIY-SSTCATYGEPEKMPITEET----PQAPIN-PYGKAKKM 226
             L++  S+C  Y +    PI E      P  P N  Y  AK+ 
Sbjct: 96  KKLVFLGSSC-IYPDLAPQPIDESDLLTGPPEPTNEGYAIAKRA 138

GDP-fucose synthetase (aka 3, 5-epimerase-4-reductase) acts in the NADP-dependent synthesis of GDP-fucose from GDP-mannose. Two activities have been proposed for the same active site: epimerization and reduction. Proteins in this subgroup are extended SDRs, which have a characteristic active site tetrad and an NADP-binding motif, [AT]GXXGXXG, that is a close match to the archetypical form. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 300

>gnl|CDD|200085 TIGR01214, rmlD, dTDP-4-dehydrorhamnose reductase

 Score = 55.5 bits (134), Expect = 4e-09
 Identities = 39/166 (23%), Positives = 64/166 (38%), Gaps = 25/166 (15%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           +L+TG  G +G     +L  +  RV +    S+                        DL 
Sbjct: 2   ILITGANGQLGRELVQQLSPE-GRVVVALTRSQ-----------------------LDLT 37

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
           D +A+ +       DAV++ AA   V  +  DP K +         +  + ARHG   L+
Sbjct: 38  DPEALERLLRAIRPDAVVNTAAYTDVDGAESDPEKAFAVNALAPQNLARAAARHGAR-LV 96

Query: 193 YSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNS 238
           + ST   +    K P  E+    P+N YG++K   E  +     N+
Sbjct: 97  HISTDYVFDGEGKRPYREDDATNPLNVYGQSKLAGEQAVRAAGPNA 142

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 287

>gnl|CDD|187552 cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid dehydrogenases (3b-HSD)-like, extended (e) SDRs

 Score = 55.1 bits (133), Expect = 5e-09
 Identities = 42/177 (23%), Positives = 72/177 (40%), Gaps = 26/177 (14%)

Query: 73  VLVTGGAGYIGSHAALRLL-KDSYRVTIVD-NLSRGNIGAVKVLQELFPEPGRLQFIYAD 130
           VLVTGG+G+ G     +LL +    V   D       + A +           ++F+  D
Sbjct: 2   VLVTGGSGFFGERLVKQLLERGGTYVRSFDIAPPGEALSAWQHPN--------IEFLKGD 53

Query: 131 LGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDT 190
           + D   V +  + +  D V H A  A V  +    L +  N+   T  VL++  R GV  
Sbjct: 54  ITDRNDVEQ--ALSGADCVFHTA--AIVPLAGPRDLYWEVNVGG-TQNVLDACQRCGVQK 108

Query: 191 LIYSSTCATYG-------EPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDM 240
            +Y+S+ +            E +P          + Y + K +AE I+L+ +   D+
Sbjct: 109 FVYTSSSSVIFGGQNIHNGDETLPYPPL----DSDMYAETKAIAEIIVLEANGRDDL 161

Extended SDR family domains belonging to this subgroup have the characteristic active site tetrad and a fairly well-conserved NAD(P)-binding motif. 3b-HSD catalyzes the NAD-dependent conversion of various steroids, such as pregnenolone to progesterone, or androstenediol to testosterone. This subgroup includes an unusual bifunctional 3b-HSD/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. It also includes human 3 beta-HSD/HSD3B1 and C(27) 3beta-HSD/ [3beta-hydroxy-delta(5)-C(27)-steroid oxidoreductase; HSD3B7]. C(27) 3beta-HSD/HSD3B7 is a membrane-bound enzyme of the endoplasmic reticulum, that catalyzes the isomerization and oxidation of 7alpha-hydroxylated sterol intermediates, an early step in bile acid biosynthesis. Mutations in the human NSDHL (NAD(P)H steroid dehydrogenase-like protein) cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. Mutations in the human gene encoding C(27) 3beta-HSD underlie a rare autosomal recessive form of neonatal cholestasis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 331

>gnl|CDD|187661 cd08958, FR_SDR_e, flavonoid reductase (FR), extended (e) SDRs

 Score = 54.9 bits (133), Expect = 6e-09
 Identities = 41/137 (29%), Positives = 59/137 (43%), Gaps = 23/137 (16%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRV-TIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
           V VTG +G+IGS    RLL+  Y V   V +   G+   V  L EL     RL+   ADL
Sbjct: 1   VCVTGASGFIGSWLVKRLLQRGYTVRATVRDP--GDEKKVAHLLELEGAKERLKLFKADL 58

Query: 132 GDAKAVNKFFSENAFD---AVMHFAA-----VAYVGESTLDPLKYYHNITSNTLVVLESM 183
            D  +      + A D    V H A+          E  ++P          TL VLE+ 
Sbjct: 59  LDYGSF-----DAAIDGCDGVFHVASPVDFDSEDPEEEMIEP------AVKGTLNVLEAC 107

Query: 184 AR-HGVDTLIYSSTCAT 199
           A+   V  ++++S+ A 
Sbjct: 108 AKAKSVKRVVFTSSVAA 124

This subgroup contains FRs of the extended SDR-type and related proteins. These FRs act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites; they have the characteristic active site triad of the SDRs (though not the upstream active site Asn) and a NADP-binding motif that is very similar to the typical extended SDR motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|216283 pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydrogenase/isomerase family

 Score = 54.6 bits (132), Expect = 7e-09
 Identities = 50/178 (28%), Positives = 80/178 (44%), Gaps = 39/178 (21%)

Query: 74  LVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVL-----QELFPEPGRLQ--- 125
           LVTGG G++G H    LL+             G +  V+V       EL  +  +LQ   
Sbjct: 1   LVTGGGGFLGRHIVRLLLR------------EGELQEVRVFDLRFSPELLEDFSKLQVIT 48

Query: 126 FIYADLGDAKAVNKFFSENAFDAVMHFAAVAYV-GESTLDPLKYYHNITSNTLVVLESMA 184
           +I  D+ D + + +  +    D V+H AA+  V G++  D           T  VL++  
Sbjct: 49  YIEGDVTDKQDLRR--ALQGSDVVIHTAAIIDVFGKAYRD--TIMKVNVKGTQNVLDACV 104

Query: 185 RHGVDTLIYSSTCA-----TYGEP-----EKMPITEETPQAPINPYGKAKKMAEDIIL 232
           + GV  L+Y+S+       +YG+P     E  P  E T Q    PY ++K +AE ++L
Sbjct: 105 KAGVRVLVYTSSMEVVGPNSYGQPIVNGDETTPY-ESTHQD---PYPESKALAEKLVL 158

The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyzes the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. Length = 280

>gnl|CDD|177856 PLN02206, PLN02206, UDP-glucuronate decarboxylase

 Score = 55.0 bits (132), Expect = 9e-09
 Identities = 52/176 (29%), Positives = 77/176 (43%), Gaps = 19/176 (10%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           V+VTGGAG++GSH   RL+     V +VDN   G    V      F  P   + I  D+ 
Sbjct: 122 VVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENV---MHHFSNP-NFELIRHDV- 176

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
               V     E   D + H A  A       +P+K        TL +L    R G   L+
Sbjct: 177 ----VEPILLE--VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLL 230

Query: 193 YSSTCATYGEPEKMPITEETPQAPINP------YGKAKKMAEDIILDFSKNSDMAV 242
            +ST   YG+P + P   ET    +NP      Y + K+ AE + +D+ + +++ V
Sbjct: 231 -TSTSEVYGDPLQHPQV-ETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGANVEV 284

Length = 442

>gnl|CDD|187573 cd05263, MupV_like_SDR_e, Pseudomonas fluorescens MupV-like, extended (e) SDRs

 Score = 54.3 bits (131), Expect = 9e-09
 Identities = 47/170 (27%), Positives = 65/170 (38%), Gaps = 20/170 (11%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           V VTGG G++G H   RLL++ ++V +   L R      +  + +         +    G
Sbjct: 1   VFVTGGTGFLGRHLVKRLLENGFKVLV---LVRSE-SLGEAHERIEEAGLEADRVRVLEG 56

Query: 133 DAKAVNKFFSENAF-------DAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMAR 185
           D    N   S  A        D V+H AA         D   +  NI   T  VLE  AR
Sbjct: 57  DLTQPNLGLSAAASRELAGKVDHVIHCAASYDFQAPNEDA--WRTNIDG-TEHVLELAAR 113

Query: 186 HGVDTLIYSSTCATYGEPEKMPITEET----PQAPINPYGKAKKMAEDII 231
             +    Y ST    G  E      ET     Q   NPY ++K  AE ++
Sbjct: 114 LDIQRFHYVSTAYVAGNRE--GNIRETELNPGQNFKNPYEQSKAEAEQLV 161

This subgroup of extended SDR family domains have the characteristic active site tetrad and a well-conserved NAD(P)-binding motif. This subgroup is not well characterized, its members are annotated as having a variety of putative functions. One characterized member is Pseudomonas fluorescens MupV a protein involved in the biosynthesis of Mupirocin, a polyketide-derived antibiotic. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|217199 pfam02719, Polysacc_synt_2, Polysaccharide biosynthesis protein

 Score = 52.5 bits (127), Expect = 4e-08
 Identities = 48/176 (27%), Positives = 76/176 (43%), Gaps = 34/176 (19%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPG--RLQFIYAD 130
           VLVTGG G IGS    ++LK + +  I+   SR      ++ QEL  E    +L+F   D
Sbjct: 1   VLVTGGGGSIGSELCRQILKFNPKKIIL--FSRDEFKLYEIRQELRQEYNDPKLRFFIGD 58

Query: 131 LGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYH-------NITSNTLVVLESM 183
           + D + + +   ++  D V H AA+ +V      PL  Y+       N+   T  V E+ 
Sbjct: 59  VRDRERLERAMEQHGVDTVFHAAALKHV------PLVEYNPMEAIKTNVLG-TENVAEAA 111

Query: 184 ARHGVDTLIYSST-CATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNS 238
             +GV+  +  ST  A                 P N  G  K++AE +    ++ S
Sbjct: 112 IENGVEKFVLISTDKAVN---------------PTNVMGATKRLAEKLFQAANRES 152

This is a family of diverse bacterial polysaccharide biosynthesis proteins including the CapD protein, WalL protein mannosyl-transferase and several putative epimerases (e.g. WbiI). Length = 280

>gnl|CDD|185103 PRK15181, PRK15181, Vi polysaccharide biosynthesis protein TviC; Provisional

 Score = 52.0 bits (124), Expect = 7e-08
 Identities = 48/160 (30%), Positives = 73/160 (45%), Gaps = 10/160 (6%)

Query: 74  LVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRG---NIGAVK--VLQELFPEPGRLQFIY 128
           L+TG AG+IGS     LL  +  V  +DN S G   N+  V+  V +E +    R  FI 
Sbjct: 19  LITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQW---SRFIFIQ 75

Query: 129 ADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV 188
            D+       K  +    D V+H AA+  V  S  DP+          L +L +     V
Sbjct: 76  GDIRKFTDCQK--ACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHV 133

Query: 189 DTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAE 228
            +  Y+++ +TYG+   +P  EE    P++PY   K + E
Sbjct: 134 SSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNE 173

Length = 348

>gnl|CDD|187671 cd09811, 3b-HSD_HSDB1_like_SDR_e, human 3beta-HSD (hydroxysteroid dehydrogenase) and HSD3B1(delta 5-delta 4-isomerase)-like, extended (e) SDRs

 Score = 51.4 bits (123), Expect = 1e-07
 Identities = 44/172 (25%), Positives = 69/172 (40%), Gaps = 23/172 (13%)

Query: 74  LVTGGAGYIGSHAALRLLKDSYR---VTIVDN-LSRGNIGAVKVLQELFPEPGRLQFIYA 129
           LVTGG G++G H    LL+       + ++D       I       E       +  I  
Sbjct: 3   LVTGGGGFLGQHIIRLLLERKEELKEIRVLDKAFGPELIE----HFEKSQGKTYVTDIEG 58

Query: 130 DLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKY--YHNITSN-TLVVLESMARH 186
           D+ D   +  F +      V+H AA+         P  Y     +  N T  VLE+  ++
Sbjct: 59  DIKDLSFL--FRACQGVSVVIHTAAIV----DVFGPPNYEELEEVNVNGTQAVLEACVQN 112

Query: 187 GVDTLIYSSTCATYGEPEKMPIT----EETPQAPIN--PYGKAKKMAEDIIL 232
            V  L+Y+S+    G   K        E+TP    +  PY  +K +AE+I+L
Sbjct: 113 NVKRLVYTSSIEVAGPNFKGRPIFNGVEDTPYEDTSTPPYASSKLLAENIVL 164

This extended-SDR subgroup includes human 3 beta-HSD/HSD3B1 and C(27) 3beta-HSD/ [3beta-hydroxy-delta(5)-C(27)-steroid oxidoreductase; HSD3B7], and related proteins. These proteins have the characteristic active site tetrad and NAD(P)-binding motif of extended SDRs. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. C(27) 3beta-HSD is a membrane-bound enzyme of the endoplasmic reticulum, it catalyzes the isomerization and oxidation of 7alpha-hydroxylated sterol intermediates, an early step in bile acid biosynthesis. Mutations in the human gene encoding C(27) 3beta-HSD underlie a rare autosomal recessive form of neonatal cholestasis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 354

>gnl|CDD|233427 TIGR01472, gmd, GDP-mannose 4,6-dehydratase

 Score = 51.4 bits (123), Expect = 1e-07
 Identities = 45/170 (26%), Positives = 76/170 (44%), Gaps = 12/170 (7%)

Query: 74  LVTGGAGYIGSHAALRLLKDSYRV-TIVDNLSRGNIGAVKVLQELFPEP-----GRLQFI 127
           L+TG  G  GS+ A  LL+  Y V  ++   S  N      ++ ++ +P      R++  
Sbjct: 4   LITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQR---IEHIYEDPHNVNKARMKLH 60

Query: 128 YADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESM--AR 185
           Y DL D+  + +   E     + + AA ++V  S   P          TL +LE++    
Sbjct: 61  YGDLTDSSNLRRIIDEIKPTEIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLG 120

Query: 186 HGVDTLIY-SSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDF 234
                  Y +ST   YG+ +++P  E TP  P +PY  AK  A  I +++
Sbjct: 121 LIKSVKFYQASTSELYGKVQEIPQNETTPFYPRSPYAAAKLYAHWITVNY 170

Alternate name: GDP-D-mannose dehydratase. This enzyme converts GDP-mannose to GDP-4-dehydro-6-deoxy-D-mannose, the first of three steps for the conversion of GDP-mannose to GDP-fucose in animals, plants, and bacteria. In bacteria, GDP-L-fucose acts as a precursor of surface antigens such as the extracellular polysaccharide colanic acid of E. coli. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116) [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 343

>gnl|CDD|212491 cd05233, SDR_c, classical (c) SDRs

 Score = 50.0 bits (120), Expect = 2e-07
 Identities = 31/146 (21%), Positives = 55/146 (37%), Gaps = 18/146 (12%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            LVTG +  IG   A RL ++  +V + D  +   +  +  ++      G    + AD+ 
Sbjct: 1   ALVTGASSGIGRAIARRLAREGAKVVLAD-RNEEALAELAAIEA---LGGNAVAVQADVS 56

Query: 133 DAKAVNKFFSE--NAF---DAVMHFAAVAYVGESTLDPLKYY-----HNITSNTLV---V 179
           D + V     E    F   D +++ A +A  G       + +      N+T   L+    
Sbjct: 57  DEEDVEALVEEALEEFGRLDILVNNAGIARPGPLEELTDEDWDRVLDVNLTGVFLLTRAA 116

Query: 180 LESMARHGVDTLIY-SSTCATYGEPE 204
           L  M + G   ++  SS       P 
Sbjct: 117 LPHMKKQGGGRIVNISSVAGLRPLPG 142

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 234

>gnl|CDD|235546 PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score = 49.8 bits (120), Expect = 3e-07
 Identities = 25/88 (28%), Positives = 35/88 (39%), Gaps = 9/88 (10%)

Query: 72  HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
             LVTG +  IG   ALRL  D  +V I D        A  +  EL    G  + +  D+
Sbjct: 7   TALVTGASRGIGRAIALRLAADGAKVVIYD---SNEEAAEALAAELRAAGGEARVLVFDV 63

Query: 132 GDAKAVNKFFSENAFDAVM-HFAAVAYV 158
            D  AV         +A +  F A+  +
Sbjct: 64  SDEAAV-----RALIEAAVEAFGALDIL 86

Length = 246

>gnl|CDD|237218 PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 49.1 bits (118), Expect = 4e-07
 Identities = 22/67 (32%), Positives = 30/67 (44%), Gaps = 4/67 (5%)

Query: 72  HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPG-RLQFIYAD 130
             LVTG A  +G   ALRL +    V +     R +  A + L E     G R Q + AD
Sbjct: 8   VALVTGAARGLGRAIALRLARAGADVVVH---YRSDEEAAEELVEAVEALGRRAQAVQAD 64

Query: 131 LGDAKAV 137
           + D  A+
Sbjct: 65  VTDKAAL 71

Length = 249

>gnl|CDD|187562 cd05252, CDP_GD_SDR_e, CDP-D-glucose 4,6-dehydratase, extended (e) SDRs

 Score = 49.6 bits (119), Expect = 4e-07
 Identities = 42/166 (25%), Positives = 69/166 (41%), Gaps = 10/166 (6%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVT--IVDNLSRGNIGAVKVLQELFPEPGRLQFIYAD 130
           VLVTG  G+ GS  +L L +   +V    +D  +  N+  +  L         +     D
Sbjct: 7   VLVTGHTGFKGSWLSLWLQELGAKVIGYSLDPPTNPNLFELANLDNK------ISSTRGD 60

Query: 131 LGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHG-VD 189
           + D  A+ +   E   + V H AA   V  S  DP++ +      T+ +LE++   G V 
Sbjct: 61  IRDLNALREAIREYEPEIVFHLAAQPLVRLSYKDPVETFETNVMGTVNLLEAIRETGSVK 120

Query: 190 TLIYSSTCATYGEPEKM-PITEETPQAPINPYGKAKKMAEDIILDF 234
            ++  ++   Y   E      E  P    +PY  +K  AE II  +
Sbjct: 121 AVVNVTSDKCYENKEWGWGYRENDPLGGHDPYSSSKGCAELIISSY 166

This subgroup contains CDP-D-glucose 4,6-dehydratase, an extended SDR, which catalyzes the conversion of CDP-D-glucose to CDP-4-keto-6-deoxy-D-glucose. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 336

>gnl|CDD|218026 pfam04321, RmlD_sub_bind, RmlD substrate binding domain

 Score = 48.8 bits (117), Expect = 6e-07
 Identities = 39/153 (25%), Positives = 58/153 (37%), Gaps = 27/153 (17%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           +LVTG  G +G     RLL +     +                       R +    DL 
Sbjct: 1   ILVTGANGQLGR-ELTRLLAERGVEVVA--------------------LDRPEL---DLT 36

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYH-NITSNTLVVLESMARHGVDTL 191
           D +AV     E   D V++ AA   V ++  +P   Y  N       + E+ A  G   L
Sbjct: 37  DPEAVAALVREARPDVVVNAAAYTAVDKAESEPELAYAVNALG-PGNLAEACAARGA-PL 94

Query: 192 IYSSTCATYGEPEKMPITEETPQAPINPYGKAK 224
           I+ ST   +   +  P  E+ P  P+N YG+ K
Sbjct: 95  IHISTDYVFDGAKGGPYREDDPTGPLNVYGRTK 127

L-rhamnose is a saccharide required for the virulence of some bacteria. Its precursor, dTDP-L-rhamnose, is synthesised by four different enzymes the final one of which is RmlD. The RmlD substrate binding domain is responsible for binding a sugar nucleotide. Length = 284

>gnl|CDD|178259 PLN02653, PLN02653, GDP-mannose 4,6-dehydratase

 Score = 47.1 bits (112), Expect = 3e-06
 Identities = 46/175 (26%), Positives = 77/175 (44%), Gaps = 10/175 (5%)

Query: 74  LVTGGAGYIGSHAALRLLKDSYRV-TIVDNLSRGNIGAVK-VLQELFPEPGRLQFIYADL 131
           L+TG  G  GS+    LL   Y V  I+   S  N   +  +  +  P   R++  Y DL
Sbjct: 10  LITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDL 69

Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTL 191
            DA ++ ++  +   D V + AA ++V  S   P      + +  L +LE++  HG +T 
Sbjct: 70  SDASSLRRWLDDIKPDEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLHGQETG 129

Query: 192 IY-----SSTCATYGE-PEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDM 240
                  + +   YG  P   P +E TP  P +PY  AK  A    +++ +   +
Sbjct: 130 RQIKYYQAGSSEMYGSTPP--PQSETTPFHPRSPYAVAKVAAHWYTVNYREAYGL 182

Length = 340

>gnl|CDD|187672 cd09812, 3b-HSD_like_1_SDR_e, 3beta-hydroxysteroid dehydrogenase (3b-HSD)-like, subgroup1, extended (e) SDRs

 Score = 46.7 bits (111), Expect = 4e-06
 Identities = 44/165 (26%), Positives = 65/165 (39%), Gaps = 18/165 (10%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           VL+TGG GY G      L K    V + D          +  QEL      ++FI AD+ 
Sbjct: 2   VLITGGGGYFGFRLGCALAKSGVHVILFD--------IRRPQQELPEG---IKFIQADVR 50

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
           D   + K  +    D V H A+    G   L+           T  +++   R  V  LI
Sbjct: 51  DLSQLEKAVA--GVDCVFHIASYGMSGREQLNRELIEEINVRGTENIIQVCVRRRVPRLI 108

Query: 193 YSSTC-ATYGEPEKMPITEETPQAP----INPYGKAKKMAEDIIL 232
           Y+ST    +G        E  P  P    ++ Y + K +AE ++L
Sbjct: 109 YTSTFNVIFGGQPIRNGDESLPYLPLDLHVDHYSRTKSIAEQLVL 153

An uncharacterized subgroup of the 3b-HSD-like extended-SDR family. Proteins in this subgroup have the characteristic active site tetrad and NAD(P)-binding motif of extended-SDRs. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 339

>gnl|CDD|215310 PLN02572, PLN02572, UDP-sulfoquinovose synthase

 Score = 45.9 bits (109), Expect = 9e-06
 Identities = 43/151 (28%), Positives = 58/151 (38%), Gaps = 18/151 (11%)

Query: 71  THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPG-------- 122
             V+V GG GY G   AL L K  Y V IVDNL R        L  L P           
Sbjct: 48  KKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRW 107

Query: 123 ------RLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSN- 175
                  ++    D+ D + +++ F     DAV+HF        S +D  +      +N 
Sbjct: 108 KEVSGKEIELYVGDICDFEFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNV 167

Query: 176 --TLVVLESMARHGVDT-LIYSSTCATYGEP 203
             TL VL ++     D  L+   T   YG P
Sbjct: 168 IGTLNVLFAIKEFAPDCHLVKLGTMGEYGTP 198

Length = 442

>gnl|CDD|187580 cd05272, TDH_SDR_e, L-threonine dehydrogenase, extended (e) SDRs

 Score = 45.0 bits (107), Expect = 1e-05
 Identities = 45/164 (27%), Positives = 67/164 (40%), Gaps = 26/164 (15%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQ-----FI 127
           +L+TGG G IGS  A  LL+  Y             G   V+     +P         F 
Sbjct: 2   ILITGGLGQIGSELAK-LLRKRY-------------GKDNVIASDIRKPPAHVVLSGPFE 47

Query: 128 YADLGDAKAVNKFFSENAFDAVMHFAAV-AYVGESTLDPLKYYHNITSNTLVVLESMARH 186
           Y D+ D K++ +    +    ++H AA+ + VGE    PL +  N+      VLE    H
Sbjct: 48  YLDVLDFKSLEEIVVNHKITWIIHLAALLSAVGEKNP-PLAWDVNMNG-LHNVLELAREH 105

Query: 187 GVDTLIYSSTCATYGEPE--KMPITEETPQAPINPYGKAKKMAE 228
               +   ST   +G P   +    ++T Q P   YG +K  AE
Sbjct: 106 N-LRIFVPSTIGAFG-PTTPRNNTPDDTIQRPRTIYGVSKVAAE 147

This subgroup contains members identified as L-threonine dehydrogenase (TDH). TDH catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. This group is distinct from TDHs that are members of the medium chain dehydrogenase/reductase family. This group has the NAD-binding motif and active site tetrad of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 308

>gnl|CDD|187615 cd05357, PR_SDR_c, pteridine reductase (PR), classical (c) SDRs

 Score = 44.2 bits (105), Expect = 2e-05
 Identities = 26/99 (26%), Positives = 36/99 (36%), Gaps = 8/99 (8%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            LVTG A  IG   A  L  + YRV +  N S     A ++  EL         + ADL 
Sbjct: 3   ALVTGAAKRIGRAIAEALAAEGYRVVVHYNRSEA--EAQRLKDELNALRNSAVLVQADLS 60

Query: 133 DAKA----VNKFFSE-NAFDAVMHFAAVAYVGESTLDPL 166
           D  A    V   F      D +++ A+  +         
Sbjct: 61  DFAACADLVAAAFRAFGRCDVLVNNASA-FYPTPLGQGS 98

Pteridine reductases (PRs), members of the SDR family, catalyzes the NAD-dependent reduction of folic acid, dihydrofolate and related compounds. In Leishmania, pteridine reductase (PTR1) acts to circumvent the anti-protozoan drugs that attack dihydrofolate reductase activity. Proteins in this subgroup have an N-terminal NAD-binding motif and a YxxxK active site motif, but have an Asp instead of the usual upstream catalytic Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 234

>gnl|CDD|233570 TIGR01777, yfcH, TIGR01777 family protein

 Score = 44.6 bits (106), Expect = 2e-05
 Identities = 40/150 (26%), Positives = 52/150 (34%), Gaps = 31/150 (20%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           +L+TGG G+IG     RL K  + VTI   L+R             P PG       +  
Sbjct: 1   ILITGGTGFIGRALTQRLTKRGHEVTI---LTRS------------PPPGANTKW--EGY 43

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPL---KYYHNI------TSNTLVVLESM 183
              A     S    DAV++ A     GE   D     +    I      T+  LV   + 
Sbjct: 44  KPWAGEDADSLEGADAVINLA-----GEPIADKRWTEERKQEIRDSRIDTTRLLVEAIAA 98

Query: 184 ARHGVDTLIYSSTCATYGEPEKMPITEETP 213
           A       I +S    YG  E    TEE  
Sbjct: 99  AEQKPKVFISASAVGYYGPSEDREYTEEDS 128

This model represents a clade of proteins of unknown function including the E. coli yfcH protein [Hypothetical proteins, Conserved]. Length = 291

>gnl|CDD|183775 PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

 Score = 43.4 bits (103), Expect = 3e-05
 Identities = 22/90 (24%), Positives = 34/90 (37%), Gaps = 8/90 (8%)

Query: 72  HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
             LVTG A  IG   A+RL  D   V +VD        A    + +    G+ +    D+
Sbjct: 8   VALVTGAARGIGRAIAVRLAADGAEVIVVD---ICGDDAAATAELVEAAGGKARARQVDV 64

Query: 132 GDAKAVNKFFS--ENAF---DAVMHFAAVA 156
            D  A+    +     F   D ++  A + 
Sbjct: 65  RDRAALKAAVAAGVEDFGRLDILVANAGIF 94

Length = 251

>gnl|CDD|187554 cd05243, SDR_a5, atypical (a) SDRs, subgroup 5

 Score = 43.0 bits (102), Expect = 4e-05
 Identities = 39/161 (24%), Positives = 61/161 (37%), Gaps = 32/161 (19%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVT-IVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
           VLV G  G +G H    LL   Y+V  +V + S+              E    + +  DL
Sbjct: 2   VLVVGATGKVGRHVVRELLDRGYQVRALVRDPSQAE----------KLEAAGAEVVVGDL 51

Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLK--YYHNITSNTLVVLESMARHGVD 189
            DA+++    +    DAV+  AA +  G+         Y  NI      ++++  + GV 
Sbjct: 52  TDAESLAA--ALEGIDAVI-SAAGSG-GKGGPRTEAVDYDGNIN-----LIDAAKKAGVK 102

Query: 190 TLIY-SSTCATYGEPEKMPITEETPQAPINPYGKAKKMAED 229
             +  SS  A         +          PY  AK+ AED
Sbjct: 103 RFVLVSSIGADKPSHPLEALG---------PYLDAKRKAED 134

This subgroup contains atypical SDRs, some of which are identified as putative NAD(P)-dependent epimerases, one as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is very similar to the extended SDRs, GXXGXXG, and binds NADP. Generally, this subgroup has poor conservation of the active site tetrad; however, individual sequences do contain matches to the YXXXK active site motif, the upstream Ser, and there is a highly conserved Asp in place of the usual active site Asn throughout the subgroup. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 203

>gnl|CDD|187540 cd05229, SDR_a3, atypical (a) SDRs, subgroup 3

 Score = 43.1 bits (102), Expect = 5e-05
 Identities = 37/161 (22%), Positives = 56/161 (34%), Gaps = 22/161 (13%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
             V G +G IG   A  L +  + V +V                       ++ + AD  
Sbjct: 2   AHVLGASGPIGREVARELRRRGWDVRLVSRSGSKL-----------AWLPGVEIVAADAM 50

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
           DA +V    +  A D + H A  AY     L P      +  N +    + A      L+
Sbjct: 51  DASSVIAA-ARGA-DVIYHCANPAYTRWEELFP-----PLMENVV----AAAEANGAKLV 99

Query: 193 YSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILD 233
                  YG     PITE+TP  P    G+ +   E+ +L 
Sbjct: 100 LPGNVYMYGPQAGSPITEDTPFQPTTRKGRIRAEMEERLLA 140

These atypical SDR family members of unknown function have a glycine-rich NAD(P)-binding motif consensus that is very similar to the extended SDRs, GXXGXXG. Generally, this group has poor conservation of the active site tetrad, However, individual sequences do contain matches to the YXXXK active site motif, and generally Tyr or Asn in place of the upstream Ser found in most SDRs. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 302

>gnl|CDD|187553 cd05242, SDR_a8, atypical (a) SDRs, subgroup 8

 Score = 43.0 bits (102), Expect = 5e-05
 Identities = 32/152 (21%), Positives = 46/152 (30%), Gaps = 31/152 (20%)

Query: 72  HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
            +++TGG G+IG     RL    + V +   LSR             P            
Sbjct: 1   KIVITGGTGFIGRALTRRLTAAGHEVVV---LSR------------RPGKAEGLAEVITW 45

Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPL---KYYHNI------TSNTLVVLES 182
                        A DAV++ A     GE              I      ++  LV   +
Sbjct: 46  DGLSLGPWEL-PGA-DAVINLA-----GEPIACRRWTEANKKEILSSRIESTRVLVEAIA 98

Query: 183 MARHGVDTLIYSSTCATYGEPEKMPITEETPQ 214
            A      LI +S    YG      +TE +P 
Sbjct: 99  NAPAPPKVLISASAVGYYGHSGDEVLTENSPS 130

This subgroup contains atypical SDRs of unknown function. Proteins in this subgroup have a glycine-rich NAD(P)-binding motif consensus that resembles that of the extended SDRs, (GXXGXXG or GGXGXXG), but lacks the characteristic active site residues of the SDRs. A Cys often replaces the usual Lys of the YXXXK active site motif, while the upstream Ser is generally present and Arg replaces the usual Asn. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 296

>gnl|CDD|233590 TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier-protein) reductase

 Score = 42.6 bits (101), Expect = 6e-05
 Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 2/71 (2%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            LVTG +  IG   AL+L K+  +V I         GA +V++EL     +   +  D+ 
Sbjct: 1   ALVTGASRGIGRAIALKLAKEGAKVII--TYRSSEEGAEEVVEELKAYGVKALGVVCDVS 58

Query: 133 DAKAVNKFFSE 143
           D + V     E
Sbjct: 59  DREDVKAVVEE 69

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

 Score = 41.7 bits (98), Expect = 2e-04
 Identities = 19/75 (25%), Positives = 30/75 (40%), Gaps = 5/75 (6%)

Query: 72  HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQ--FIYA 129
             LVTG +  IG   A  L ++  RV +     R    A + L     E G  +   + A
Sbjct: 7   VALVTGASSGIGRAIARALAREGARVVVAA--RRSEEEAAEALAAAIKEAGGGRAAAVAA 64

Query: 130 DLGD-AKAVNKFFSE 143
           D+ D  ++V    + 
Sbjct: 65  DVSDDEESVEALVAA 79

Length = 251

>gnl|CDD|222146 pfam13460, NAD_binding_10, NADH(P)-binding

 Score = 40.8 bits (96), Expect = 2e-04
 Identities = 37/162 (22%), Positives = 58/162 (35%), Gaps = 31/162 (19%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           + V G  G  G      LL   ++VT    LSR    A             +  +  DL 
Sbjct: 1   IAVIGATGKTGRRLVKELLARGHQVTA---LSRNPSKAPAP---------GVTPVQKDLF 48

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
           D   + +  +    DAV     V   G    D     H        +L++ AR GV  ++
Sbjct: 49  DLADLAEALAG--VDAV-----VDAFGARPDDSDGVKH--------LLDAAARAGVRRIV 93

Query: 193 -YSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILD 233
             S+    Y +       ++ P  P  PY +AK  AE+++  
Sbjct: 94  VVSAAGL-YRDEPGTFRLDDAPLFP--PYARAKAAAEELLRA 132

Length = 182

>gnl|CDD|187624 cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol dehydrogenase-like, classical (c) SDRs

 Score = 41.2 bits (97), Expect = 2e-04
 Identities = 21/89 (23%), Positives = 35/89 (39%), Gaps = 7/89 (7%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            ++TG A  IG   A RL  D + + + D        A   +QE+         + AD+ 
Sbjct: 5   AIITGAAQGIGRAIAERLAADGFNIVLADLNL--EEAAKSTIQEISEAGYNAVAVGADVT 62

Query: 133 DAKAVNKFFSENA-----FDAVMHFAAVA 156
           D   V     +       FD +++ A +A
Sbjct: 63  DKDDVEALIDQAVEKFGSFDVMVNNAGIA 91

2,3-butanediol dehydrogenases (BDHs) catalyze the NAD+ dependent conversion of 2,3-butanediol to acetonin; BDHs are classified into types according to their stereospecificity as to substrates and products. Included in this subgroup are Klebsiella pneumonia meso-BDH which catalyzes meso-2,3-butanediol to D(-)-acetonin, and Corynebacterium glutamicum L-BDH which catalyzes lX+)-2,3-butanediol to L(+)-acetonin. This subgroup is comprised of classical SDRs with the characteristic catalytic triad and NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|187643 cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine reductase (KDSR) and related proteins, classical (c) SDR

 Score = 40.3 bits (95), Expect = 3e-04
 Identities = 36/146 (24%), Positives = 60/146 (41%), Gaps = 15/146 (10%)

Query: 71  THVLVTGGAGYIGSHAALRLLKDSYRVTIVD-NLSRGNIGAVKVLQELFPEPGRLQFIYA 129
            HVL+TGG+  IG   A  L+K+   V IV  + S+      ++  E      ++ +I A
Sbjct: 2   KHVLITGGSSGIGKALAKELVKEGANVIIVARSESKLEEAVEEIEAEANASGQKVSYISA 61

Query: 130 DLGDAKAVNKFFSENAF-----DAVMHFAAVAYVGE-STLDPLKYYHNITSNTL------ 177
           DL D + V + F++        D V++ A ++  G    L   ++   +  N        
Sbjct: 62  DLSDYEEVEQAFAQAVEKGGPPDLVVNCAGISIPGLFEDLTAEEFERGMDVNYFGSLNVA 121

Query: 178 -VVLESM-ARHGVDTLIYSSTCATYG 201
             VL  M  +     +  SS  A  G
Sbjct: 122 HAVLPLMKEQRPGHIVFVSSQAALVG 147

These proteins include members identified as KDSR, ribitol type dehydrogenase, and others. The group shows strong conservation of the active site tetrad and glycine rich NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 239

>gnl|CDD|180983 PRK07453, PRK07453, protochlorophyllide oxidoreductase; Validated

 Score = 40.7 bits (96), Expect = 4e-04
 Identities = 27/88 (30%), Positives = 40/88 (45%), Gaps = 8/88 (9%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           V++TG +  +G +AA  L K  + V +     R    A    QEL   P     I+ DLG
Sbjct: 9   VIITGASSGVGLYAAKALAKRGWHVIMA---CRNLKKAEAAAQELGIPPDSYTIIHIDLG 65

Query: 133 DAKAVNKFFSE-----NAFDAVMHFAAV 155
           D  +V +F  +        DA++  AAV
Sbjct: 66  DLDSVRRFVDDFRALGKPLDALVCNAAV 93

Length = 322

>gnl|CDD|187602 cd05344, BKR_like_SDR_like, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR)-like, SDR

 Score = 40.3 bits (95), Expect = 4e-04
 Identities = 17/71 (23%), Positives = 29/71 (40%), Gaps = 3/71 (4%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            LVT  +  IG   A  L ++  RV I    +R      +   EL      +  + ADL 
Sbjct: 4   ALVTAASSGIGLAIARALAREGARVAI---CARNRENLERAASELRAGGAGVLAVVADLT 60

Query: 133 DAKAVNKFFSE 143
           D + +++   +
Sbjct: 61  DPEDIDRLVEK 71

This subgroup resembles the SDR family, but does not have a perfect match to the NAD-binding motif or the catalytic tetrad characteristic of the SDRs. It includes the SDRs, Q9HYA2 from Pseudomonas aeruginosa PAO1 and APE0912 from Aeropyrum pernix K1. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|237219 PRK12827, PRK12827, short chain dehydrogenase; Provisional

 Score = 40.1 bits (94), Expect = 5e-04
 Identities = 26/85 (30%), Positives = 37/85 (43%), Gaps = 7/85 (8%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS-RGNIGAVKVLQELFPEPGRLQFIYADL 131
           VL+TGG+G +G   A+RL  D   V ++D    RG   A  V   +    G+   +  D+
Sbjct: 9   VLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDV 68

Query: 132 GDAKAVNKFFSENAFDA-VMHFAAV 155
            D  A        A DA V  F  +
Sbjct: 69  RDFAAT-----RAALDAGVEEFGRL 88

Length = 249

>gnl|CDD|131468 TIGR02415, 23BDH, acetoin reductases

 Score = 40.1 bits (94), Expect = 5e-04
 Identities = 32/107 (29%), Positives = 47/107 (43%), Gaps = 11/107 (10%)

Query: 74  LVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD 133
           LVTGGA  IG   A RL KD + V + D        A +  +E+    G+      D+ D
Sbjct: 4   LVTGGAQGIGKGIAERLAKDGFAVAVAD---LNEETAKETAKEINQAGGKAVAYKLDVSD 60

Query: 134 AKAVNKFFSENA-----FDAVMHFAAVAYVG---ESTLDPLKYYHNI 172
              V     + A     FD +++ A VA +    E T + LK  +N+
Sbjct: 61  KDQVFSAIDQAAEKFGGFDVMVNNAGVAPITPILEITEEELKKVYNV 107

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PMID:11577733) [Energy metabolism, Fermentation]. Length = 254

>gnl|CDD|183833 PRK12939, PRK12939, short chain dehydrogenase; Provisional

 Score = 40.0 bits (94), Expect = 6e-04
 Identities = 26/89 (29%), Positives = 38/89 (42%), Gaps = 8/89 (8%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            LVTG A  +G+  A  L +    V   D L+     A ++   L    GR   I ADL 
Sbjct: 10  ALVTGAARGLGAAFAEALAEAGATVAFNDGLAA---EARELAAALEAAGGRAHAIAADLA 66

Query: 133 DAKAVNKFFSENA-----FDAVMHFAAVA 156
           D  +V +FF   A      D +++ A + 
Sbjct: 67  DPASVQRFFDAAAAALGGLDGLVNNAGIT 95

Length = 250

>gnl|CDD|187594 cd05333, BKR_SDR_c, beta-Keto acyl carrier protein reductase (BKR), involved in Type II FAS, classical (c) SDRs

 Score = 39.8 bits (94), Expect = 6e-04
 Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 3/71 (4%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            LVTG +  IG   ALRL  +  +V + D   R    A + ++E+    G    + AD+ 
Sbjct: 3   ALVTGASRGIGRAIALRLAAEGAKVAVTD---RSEEAAAETVEEIKALGGNAAALEADVS 59

Query: 133 DAKAVNKFFSE 143
           D +AV     +
Sbjct: 60  DREAVEALVEK 70

This subgroup includes the Escherichai coli K12 BKR, FabG. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 240

>gnl|CDD|178263 PLN02657, PLN02657, 3,8-divinyl protochlorophyllide a 8-vinyl reductase

 Score = 40.1 bits (94), Expect = 6e-04
 Identities = 39/141 (27%), Positives = 56/141 (39%), Gaps = 12/141 (8%)

Query: 54  SPTFSSPSPFSQHEEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVD---NLSRGNIGA 110
           +   ++   F   E     VLV G  GYIG      L++  Y V  V    +  RG  G 
Sbjct: 44  ATAAAAAQSFRSKEPKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGK 103

Query: 111 VKVLQELFPEPGRLQFIYADLGDAKAVNK-FFSEN-AFDAVMHFAAVAYVGESTLDPLKY 168
               +EL       + ++ D+ DA ++ K  FSE    D V+   A    G    D  K 
Sbjct: 104 EDTKKELPG----AEVVFGDVTDADSLRKVLFSEGDPVDVVVSCLASRTGGVK--DSWKI 157

Query: 169 YHNITSNTLVV-LESMARHGV 188
            +  T N+L    E  A+H V
Sbjct: 158 DYQATKNSLDAGREVGAKHFV 178

Length = 390

>gnl|CDD|233954 TIGR02622, CDP_4_6_dhtase, CDP-glucose 4,6-dehydratase

 Score = 39.6 bits (93), Expect = 8e-04
 Identities = 35/116 (30%), Positives = 54/116 (46%), Gaps = 9/116 (7%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVT--IVDNLSRGNIGAVKVLQELFPEPGRLQFIYAD 130
           VLVTG  G+ GS  +L LL+    V    +D  +  N      L EL     +++  + D
Sbjct: 7   VLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPN------LFELLNLAKKIEDHFGD 60

Query: 131 LGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARH 186
           + DA  + K  +E   + V H AA   V +S  DPL+ +      T+ +LE+  R 
Sbjct: 61  IRDAAKLRKAIAEFKPEIVFHLAAQPLVRKSYADPLETFETNVMGTVNLLEA-IRA 115

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 349

>gnl|CDD|132628 TIGR03589, PseB, UDP-N-acetylglucosamine 4,6-dehydratase

 Score = 39.3 bits (92), Expect = 0.001
 Identities = 43/158 (27%), Positives = 69/158 (43%), Gaps = 22/158 (13%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           +L+TGG G  G     RLL++ Y    +   SR  +   + +Q+ FP P  L+F   D+ 
Sbjct: 7   ILITGGTGSFGKAFISRLLEN-YNPKKIIIYSRDELKQWE-MQQKFPAP-CLRFFIGDVR 63

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYH-NITSNTLVVLESMARHGVDTL 191
           D + + +       D V+H AA+  V  +  +P +    NI     V+  ++   GV  +
Sbjct: 64  DKERLTRAL--RGVDYVVHAAALKQVPAAEYNPFECIRTNINGAQNVIDAAIDN-GVKRV 120

Query: 192 IYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAED 229
           +  ST              +    PIN YG A K+A D
Sbjct: 121 VALST--------------DKAANPINLYG-ATKLASD 143

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family. Length = 324

>gnl|CDD|181518 PRK08643, PRK08643, acetoin reductase; Validated

 Score = 38.9 bits (91), Expect = 0.001
 Identities = 26/89 (29%), Positives = 39/89 (43%), Gaps = 10/89 (11%)

Query: 74  LVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNI-GAVKVLQELFPEPGRLQFIYADLG 132
           LVTG    IG   A RL++D ++V IVD     N   A     +L  + G+   + AD+ 
Sbjct: 6   LVTGAGQGIGFAIAKRLVEDGFKVAIVDY----NEETAQAAADKLSKDGGKAIAVKADVS 61

Query: 133 DAKAVNKFFSENA-----FDAVMHFAAVA 156
           D   V     +        + V++ A VA
Sbjct: 62  DRDQVFAAVRQVVDTFGDLNVVVNNAGVA 90

Length = 256

>gnl|CDD|178298 PLN02695, PLN02695, GDP-D-mannose-3',5'-epimerase

 Score = 39.0 bits (91), Expect = 0.001
 Identities = 41/182 (22%), Positives = 73/182 (40%), Gaps = 32/182 (17%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL- 131
           + +TG  G+I SH A RL  + + +   D     ++      +++F      +F   DL 
Sbjct: 24  ICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHMS-----EDMFCH----EFHLVDLR 74

Query: 132 --GDAKAVNKFFSENAFDAVMHFAA-VAYVG--ESTLDPLKYYHNITSNTLVVLESMARH 186
              +   V K       D V + AA +  +G  +S    + Y  N T  +  +LE+   +
Sbjct: 75  VMENCLKVTK-----GVDHVFNLAADMGGMGFIQSNHSVIMY--NNTMISFNMLEAARIN 127

Query: 187 GVDTLIYSSTCATYGEPEKMPITEET--------PQAPINPYGKAKKMAEDIILDFSKNS 238
           GV    Y+S+   Y  PE   +            P  P + YG  K   E++   ++K+ 
Sbjct: 128 GVKRFFYASSACIY--PEFKQLETNVSLKESDAWPAEPQDAYGLEKLATEELCKHYTKDF 185

Query: 239 DM 240
            +
Sbjct: 186 GI 187

Length = 370

>gnl|CDD|187556 cd05245, SDR_a2, atypical (a) SDRs, subgroup 2

 Score = 38.9 bits (91), Expect = 0.001
 Identities = 18/69 (26%), Positives = 28/69 (40%), Gaps = 8/69 (11%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           VLVTG  GY+G     RLL++ ++V     L R                 R+  +  DL 
Sbjct: 1   VLVTGATGYVGGRLVPRLLQEGHQVRA---LVRSPEKLADRPWS-----ERVTVVRGDLE 52

Query: 133 DAKAVNKFF 141
           D +++    
Sbjct: 53  DPESLRAAL 61

This subgroup contains atypical SDRs, one member is identified as Escherichia coli protein ybjT, function unknown. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that generally matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|215720 pfam00106, adh_short, short chain dehydrogenase

 Score = 37.9 bits (89), Expect = 0.002
 Identities = 23/90 (25%), Positives = 37/90 (41%), Gaps = 7/90 (7%)

Query: 72  HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPG-RLQFIYAD 130
            VL+TGG G +G   A  L  +  R  ++ +      GA +++ EL    G  +     D
Sbjct: 2   TVLITGGTGGLGLALARWLAAEGARHLVLVSRRGPAPGAAELVAEL-EALGAEVTVAACD 60

Query: 131 LGDAKAVNKFFSENA-----FDAVMHFAAV 155
           + D  A+    +         D V+H A V
Sbjct: 61  VADRDALAALLAALPAALGPLDGVVHNAGV 90

This family contains a wide variety of dehydrogenases. Length = 167

>gnl|CDD|212492 cd05327, retinol-DH_like_SDR_c_like, retinol dehydrogenase (retinol-DH), Light dependent Protochlorophyllide (Pchlide) OxidoReductase (LPOR) and related proteins, classical (c) SDRs

 Score = 38.4 bits (90), Expect = 0.002
 Identities = 22/98 (22%), Positives = 35/98 (35%), Gaps = 10/98 (10%)

Query: 72  HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPG--RLQFIYA 129
            V++TG    IG   A  L K    V I     R      +   E+  E G  +++ I  
Sbjct: 3   VVVITGANSGIGKETARELAKRGAHVIIA---CRNEEKGEEAAAEIKKETGNAKVEVIQL 59

Query: 130 DLGDAKAVNKFFSE-----NAFDAVMHFAAVAYVGEST 162
           DL    +V +F  E        D +++ A +       
Sbjct: 60  DLSSLASVRQFAEEFLARFPRLDILINNAGIMAPPRRL 97

Classical SDR subgroup containing retinol-DHs, LPORs, and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Pchlide reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14, dehydrogenase/reductase SDR family member (DHRS)-12 , -13 and -X (a DHRS on chromosome X), and WWOX (WW domain-containing oxidoreductase), as well as a Neurospora crassa SDR encoded by the blue light inducible bli-4 gene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 269

>gnl|CDD|187572 cd05262, SDR_a7, atypical (a) SDRs, subgroup 7

 Score = 38.5 bits (90), Expect = 0.002
 Identities = 27/84 (32%), Positives = 36/84 (42%), Gaps = 11/84 (13%)

Query: 72  HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
            V VTG  G+IGS     L+   + V     L+R + GA K+      E    Q    DL
Sbjct: 2   KVFVTGATGFIGSAVVRELVAAGHEVV---GLARSDAGAAKL------EAAGAQVHRGDL 52

Query: 132 GDAKAVNKFFSENAFDAVMHFAAV 155
            D   + K  +E   DAV+H A  
Sbjct: 53  EDLDILRKAAAEA--DAVIHLAFT 74

This subgroup contains atypical SDRs of unknown function. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 291

>gnl|CDD|187584 cd05323, ADH_SDR_c_like, insect type alcohol dehydrogenase (ADH)-like, classical (c) SDRs

 Score = 38.1 bits (89), Expect = 0.002
 Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 3/59 (5%)

Query: 72  HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYAD 130
             ++TGGA  IG   A  LLK   +V I+D     N GA   LQ + P+  +  F+  D
Sbjct: 2   VAIITGGASGIGLATAKLLLKKGAKVAILD--RNENPGAAAELQAINPK-VKATFVQCD 57

This subgroup contains insect type ADH, and 15-hydroxyprostaglandin dehydrogenase (15-PGDH) type I; these proteins are classical SDRs. ADH catalyzes the NAD+-dependent oxidation of alcohols to aldehydes/ketones. This subgroup is distinct from the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase/reductase family, and evolved in fruit flies to allow the digestion of fermenting fruit. 15-PGDH catalyzes the NAD-dependent interconversion of (5Z,13E)-(15S)-11alpha,15-dihydroxy-9-oxoprost-13-enoate and (5Z,13E)-11alpha-hydroxy-9,15-dioxoprost-13-enoate, and has a typical SDR glycine-rich NAD-binding motif, which is not fully present in ADH. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|235506 PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 37.9 bits (89), Expect = 0.002
 Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 2/71 (2%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            +VTG +G IG   A  L K+  +V I  +++     A ++L+E+  E G    + AD+ 
Sbjct: 8   AIVTGASGGIGRAIAELLAKEGAKVVIAYDINEE--AAQELLEEIKEEGGDAIAVKADVS 65

Query: 133 DAKAVNKFFSE 143
             + V     +
Sbjct: 66  SEEDVENLVEQ 76

Length = 247

>gnl|CDD|187620 cd05362, THN_reductase-like_SDR_c, tetrahydroxynaphthalene/trihydroxynaphthalene reductase-like, classical (c) SDRs

 Score = 38.0 bits (89), Expect = 0.002
 Identities = 28/104 (26%), Positives = 40/104 (38%), Gaps = 17/104 (16%)

Query: 74  LVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD 133
           LVTG +  IG   A RL +D   V +  N +     A +V+ E+    G+   + AD+ D
Sbjct: 7   LVTGASRGIGRAIAKRLARDGASVVV--NYASSKAAAEEVVAEIEAAGGKAIAVQADVSD 64

Query: 134 AKAVNKFFSE-------------NAFDAVMHFAAVAYVGESTLD 164
              V + F               NA   VM    +A   E   D
Sbjct: 65  PSQVARLFDAAEKAFGGVDILVNNA--GVMLKKPIAETSEEEFD 106

1,3,6,8-tetrahydroxynaphthalene reductase (4HNR) of Magnaporthe grisea and the related 1,3,8-trihydroxynaphthalene reductase (3HNR) are typical members of the SDR family containing the canonical glycine rich NAD(P)-binding site and active site tetrad, and function in fungal melanin biosynthesis. This subgroup also includes an SDR from Norway spruce that may function to protect against both biotic and abitoic stress. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|225857 COG3320, COG3320, Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

 Score = 38.1 bits (89), Expect = 0.002
 Identities = 48/191 (25%), Positives = 69/191 (36%), Gaps = 42/191 (21%)

Query: 72  HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGN--IGAVKVLQELFPEPGRLQFIYA 129
           +VL+TG  G++G++  L LL  S    I   L R      A+  L++ F        + A
Sbjct: 2   NVLLTGATGFLGAYLLLELLDRSDAKVIC--LVRAQSDEAALARLEKTFDLYRHWDELSA 59

Query: 130 D-----LGDAKAVNKF-FSE-------NAFDAVMHFAA-VAYVGE-STLDPLKYYHNITS 174
           D      GD  A      SE          D ++H AA V +V   S L          +
Sbjct: 60  DRVEVVAGD-LAEPDLGLSERTWQELAENVDLIIHNAALVNHVFPYSELRG--------A 110

Query: 175 NTLV---VLESMARHGVDTLIYSSTCATYGEPEKMPITEETP----------QAPINPYG 221
           N L    VL   A      L Y S+ +  GE E                   Q     YG
Sbjct: 111 NVLGTAEVLRLAATGKPKPLHYVSSISV-GETEYYSNFTVDFDEISPTRNVGQGLAGGYG 169

Query: 222 KAKKMAEDIIL 232
           ++K +AE ++ 
Sbjct: 170 RSKWVAEKLVR 180

Length = 382

>gnl|CDD|224015 COG1090, COG1090, Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

 Score = 38.0 bits (89), Expect = 0.002
 Identities = 42/150 (28%), Positives = 58/150 (38%), Gaps = 31/150 (20%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           +L+TGG G IG     RL K  ++VTI   L+R      K  Q L P     + + AD  
Sbjct: 1   ILITGGTGLIGRALTARLRKGGHQVTI---LTR---RPPKASQNLHPNVTLWEGL-ADAL 53

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPL---KYYHNI------TSNTLVVLESM 183
                         DAV++ A     GE   +     K    I      T+  LV L + 
Sbjct: 54  TL----------GIDAVINLA-----GEPIAERRWTEKQKEEIRQSRINTTEKLVELIAA 98

Query: 184 ARHGVDTLIYSSTCATYGEPEKMPITEETP 213
           +      LI +S    YG      +TEE+P
Sbjct: 99  SETKPKVLISASAVGYYGHSGDRVVTEESP 128

Length = 297

>gnl|CDD|182998 PRK11150, rfaD, ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

 Score = 37.8 bits (88), Expect = 0.003
 Identities = 42/159 (26%), Positives = 64/159 (40%), Gaps = 23/159 (14%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYR-VTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYA-- 129
           ++VTGGAG+IGS+    L       + +VDNL  G      V  ++     +  F+    
Sbjct: 2   IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLDIADYMDKEDFLAQIM 61

Query: 130 ---DLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKY-YHNITSNTLVVLESMAR 185
              D GD +A+   F E A  +   +              KY   N    +  +L     
Sbjct: 62  AGDDFGDIEAI---FHEGACSSTTEWDG------------KYMMDNNYQYSKELLHYCLE 106

Query: 186 HGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAK 224
             +  L Y+S+ ATYG      I E   + P+N YG +K
Sbjct: 107 REIPFL-YASSAATYGGRTDDFIEEREYEKPLNVYGYSK 144

Length = 308

>gnl|CDD|178484 PLN02896, PLN02896, cinnamyl-alcohol dehydrogenase

 Score = 37.5 bits (87), Expect = 0.004
 Identities = 45/178 (25%), Positives = 66/178 (37%), Gaps = 34/178 (19%)

Query: 67  EEGVTHVLVTGGAGYIGSHAALRLLKDSYRV--TIVDNLSRGNIGAVKVLQELFPEPGRL 124
           E       VTG  GYIGS     LL+  Y V  T+ D            L   + E  RL
Sbjct: 7   ESATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRD------PAKSLHLLSKWKEGDRL 60

Query: 125 QFIYADLGDAKAVNKFFSENAFDAVMHFAAV-------------AYVGESTLDPLKYYHN 171
           +   ADL +  + ++       D V H AA               YV    +DP      
Sbjct: 61  RLFRADLQEEGSFDEAVK--GCDGVFHVAASMEFDVSSDHNNIEEYVQSKVIDP------ 112

Query: 172 ITSNTLVVLESMARHG-VDTLIYSSTCATY---GEPEKM-PITEETPQAPINPYGKAK 224
               TL VL+S  +   V  ++++S+ +T        +   + +ET Q PI+     K
Sbjct: 113 AIKGTLNVLKSCLKSKTVKRVVFTSSISTLTAKDSNGRWRAVVDETCQTPIDHVWNTK 170

Length = 353

>gnl|CDD|219687 pfam07993, NAD_binding_4, Male sterility protein

 Score = 37.2 bits (87), Expect = 0.004
 Identities = 38/191 (19%), Positives = 69/191 (36%), Gaps = 36/191 (18%)

Query: 75  VTGGAGYIGSHAALRLLKDSYRVTIVDNL----SRGNIGAVKVLQELF----PEP----G 122
           +TG  G++G     +LL+ +  V I          G     ++ QEL      +      
Sbjct: 1   LTGATGFLGKVLLEKLLRSTPEVKIY--CLVRAKDGESALERLRQELLKYGLFDRLKALE 58

Query: 123 RLQFIYADLGDAK-----AVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYY--HNITSN 175
           R+  +  DL +          +  +E   D ++H AA      + ++P       N+   
Sbjct: 59  RIIPVAGDLSEPNLGLSDEDFQELAEEV-DVIIHNAATV----NFVEPYSDLRATNVLG- 112

Query: 176 TLVVLESMARHGVDTLIYSSTCATYGE-----PEKMPITEETPQAPI----NPYGKAKKM 226
           T  VL    +       + ST    GE      EK    +E   A +    N Y ++K +
Sbjct: 113 TREVLRLAKQMKKLPFHHVSTAYVNGERGGLLEEKPYKLDEDEPALLGGLPNGYTQSKWL 172

Query: 227 AEDIILDFSKN 237
           AE ++ + +  
Sbjct: 173 AEQLVREAAGG 183

This family represents the C-terminal region of the male sterility protein in a number of arabidopsis and drosophila. A sequence-related jojoba acyl CoA reductase is also included. Length = 245

>gnl|CDD|187579 cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, subunit 9, 39 kDa, (NDUFA9) -like, atypical (a) SDRs

 Score = 37.2 bits (87), Expect = 0.004
 Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 5/62 (8%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           V V G  G+IG +   RL K   +V +     R    A ++L  +  + G++ F+  DL 
Sbjct: 3   VTVFGATGFIGRYVVNRLAKRGSQVIVP---YRCEAYARRLL--VMGDLGQVLFVEFDLR 57

Query: 133 DA 134
           D 
Sbjct: 58  DD 59

This subgroup of extended SDR-like proteins are atypical SDRs. They have a glycine-rich NAD(P)-binding motif similar to the typical SDRs, GXXGXXG, and have the YXXXK active site motif (though not the other residues of the SDR tetrad). Members identified include NDUFA9 (mitochondrial) and putative nucleoside-diphosphate-sugar epimerase. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 273

>gnl|CDD|236399 PRK09186, PRK09186, flagellin modification protein A; Provisional

 Score = 37.3 bits (87), Expect = 0.004
 Identities = 19/74 (25%), Positives = 35/74 (47%), Gaps = 7/74 (9%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVD-NLSRGNIGAVKVLQELFPEPG--RLQFIYA 129
           +L+TG  G IGS     +L+    V   D +    N    ++L+ L  E    +L  +  
Sbjct: 7   ILITGAGGLIGSALVKAILEAGGIVIAADIDKEALN----ELLESLGKEFKSKKLSLVEL 62

Query: 130 DLGDAKAVNKFFSE 143
           D+ D +++ +F S+
Sbjct: 63  DITDQESLEEFLSK 76

Length = 256

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	248
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	100.0
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	99.97
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	99.96
COG0300	265	DltE Short-chain dehydrogenases of various substra	99.96
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	99.96
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	99.96
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	99.96
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	99.96
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	99.96
PLN02572	442	UDP-sulfoquinovose synthase	99.95
PLN02653	340	GDP-mannose 4,6-dehydratase	99.95
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	99.95
PLN02240	352	UDP-glucose 4-epimerase	99.95
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	99.95
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	99.95
PLN02214	342	cinnamoyl-CoA reductase	99.95
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	99.95
PRK10675	338	UDP-galactose-4-epimerase; Provisional	99.95
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	99.94
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	99.94
PLN02427	386	UDP-apiose/xylose synthase	99.94
PRK08339	263	short chain dehydrogenase; Provisional	99.94
PRK05854	313	short chain dehydrogenase; Provisional	99.94
PLN00198	338	anthocyanidin reductase; Provisional	99.94
PLN02896	353	cinnamyl-alcohol dehydrogenase	99.94
PRK05876	275	short chain dehydrogenase; Provisional	99.94
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	99.94
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	99.93
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	99.93
PLN02650	351	dihydroflavonol-4-reductase	99.93
PRK07063	260	short chain dehydrogenase; Provisional	99.93
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	99.93
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	99.93
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	99.93
PRK08589	272	short chain dehydrogenase; Validated	99.93
PRK06197	306	short chain dehydrogenase; Provisional	99.93
PLN02166	436	dTDP-glucose 4,6-dehydratase	99.93
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.93
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	99.93
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	99.93
PRK07453	322	protochlorophyllide oxidoreductase; Validated	99.93
PRK05993	277	short chain dehydrogenase; Provisional	99.93
PRK06139	330	short chain dehydrogenase; Provisional	99.93
PRK07478	254	short chain dehydrogenase; Provisional	99.93
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.92
PRK06398	258	aldose dehydrogenase; Validated	99.92
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	99.92
KOG1208	314	consensus Dehydrogenases with different specificit	99.92
PRK07062	265	short chain dehydrogenase; Provisional	99.92
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	99.92
PRK07791	286	short chain dehydrogenase; Provisional	99.92
PRK06114	254	short chain dehydrogenase; Provisional	99.92
KOG0725	270	consensus Reductases with broad range of substrate	99.92
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	99.92
PRK06194	287	hypothetical protein; Provisional	99.92
PLN02695	370	GDP-D-mannose-3',5'-epimerase	99.92
PRK07024	257	short chain dehydrogenase; Provisional	99.92
PRK07523	255	gluconate 5-dehydrogenase; Provisional	99.92
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	99.92
PRK07825	273	short chain dehydrogenase; Provisional	99.92
PRK06196	315	oxidoreductase; Provisional	99.92
PLN02206	442	UDP-glucuronate decarboxylase	99.92
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	99.92
PRK07109	334	short chain dehydrogenase; Provisional	99.92
PRK06180	277	short chain dehydrogenase; Provisional	99.92
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	99.92
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.92
PLN02260	668	probable rhamnose biosynthetic enzyme	99.92
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	99.92
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	99.92
PRK06482	276	short chain dehydrogenase; Provisional	99.92
PRK08278	273	short chain dehydrogenase; Provisional	99.92
PRK06179	270	short chain dehydrogenase; Provisional	99.92
PRK05866	293	short chain dehydrogenase; Provisional	99.92
PLN02780	320	ketoreductase/ oxidoreductase	99.92
PRK07097	265	gluconate 5-dehydrogenase; Provisional	99.92
PRK08085	254	gluconate 5-dehydrogenase; Provisional	99.92
PRK08277	278	D-mannonate oxidoreductase; Provisional	99.92
PRK06128	300	oxidoreductase; Provisional	99.92
PRK05867	253	short chain dehydrogenase; Provisional	99.92
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	99.92
PRK12747	252	short chain dehydrogenase; Provisional	99.92
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	99.92
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	99.92
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	99.92
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	99.92
PRK08303	305	short chain dehydrogenase; Provisional	99.92
PLN02583	297	cinnamoyl-CoA reductase	99.91
PRK09186	256	flagellin modification protein A; Provisional	99.91
PRK05650	270	short chain dehydrogenase; Provisional	99.91
PRK07454	241	short chain dehydrogenase; Provisional	99.91
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	99.91
PRK05599	246	hypothetical protein; Provisional	99.91
PRK07775	274	short chain dehydrogenase; Provisional	99.91
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	99.91
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	99.91
PRK06182	273	short chain dehydrogenase; Validated	99.91
PLN02253	280	xanthoxin dehydrogenase	99.91
PRK08263	275	short chain dehydrogenase; Provisional	99.91
PRK06138	252	short chain dehydrogenase; Provisional	99.91
PRK05717	255	oxidoreductase; Validated	99.91
PRK05872	296	short chain dehydrogenase; Provisional	99.91
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.91
PRK07904	253	short chain dehydrogenase; Provisional	99.91
PRK07890	258	short chain dehydrogenase; Provisional	99.91
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.91
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	99.91
PRK06523	260	short chain dehydrogenase; Provisional	99.91
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	99.91
PLN02686	367	cinnamoyl-CoA reductase	99.91
PRK08643	256	acetoin reductase; Validated	99.91
PRK08267	260	short chain dehydrogenase; Provisional	99.91
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	99.91
PRK08265	261	short chain dehydrogenase; Provisional	99.91
PRK08936	261	glucose-1-dehydrogenase; Provisional	99.91
PRK07985	294	oxidoreductase; Provisional	99.91
PRK07035	252	short chain dehydrogenase; Provisional	99.91
PRK08862	227	short chain dehydrogenase; Provisional	99.91
PRK08340	259	glucose-1-dehydrogenase; Provisional	99.91
PRK06172	253	short chain dehydrogenase; Provisional	99.91
PRK12743	256	oxidoreductase; Provisional	99.91
PRK09134	258	short chain dehydrogenase; Provisional	99.91
PRK06914	280	short chain dehydrogenase; Provisional	99.91
PRK12746	254	short chain dehydrogenase; Provisional	99.91
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	99.91
PRK09291	257	short chain dehydrogenase; Provisional	99.91
PRK07831	262	short chain dehydrogenase; Provisional	99.91
PRK06483	236	dihydromonapterin reductase; Provisional	99.91
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	99.91
PRK12938	246	acetyacetyl-CoA reductase; Provisional	99.91
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	99.91
PRK12935	247	acetoacetyl-CoA reductase; Provisional	99.91
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.91
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	99.91
PRK07677	252	short chain dehydrogenase; Provisional	99.91
PRK07774	250	short chain dehydrogenase; Provisional	99.91
PRK06125	259	short chain dehydrogenase; Provisional	99.91
PRK05855	582	short chain dehydrogenase; Validated	99.9
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	99.9
PRK07102	243	short chain dehydrogenase; Provisional	99.9
PRK08628	258	short chain dehydrogenase; Provisional	99.9
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.9
PRK06701	290	short chain dehydrogenase; Provisional	99.9
PRK09242	257	tropinone reductase; Provisional	99.9
PRK12827	249	short chain dehydrogenase; Provisional	99.9
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	99.9
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.9
PRK07814	263	short chain dehydrogenase; Provisional	99.9
PRK06124	256	gluconate 5-dehydrogenase; Provisional	99.9
PRK12824	245	acetoacetyl-CoA reductase; Provisional	99.9
PRK07576	264	short chain dehydrogenase; Provisional	99.9
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	99.9
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	99.9
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.9
PRK08251	248	short chain dehydrogenase; Provisional	99.9
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	99.9
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.9
PRK08213	259	gluconate 5-dehydrogenase; Provisional	99.9
PRK07856	252	short chain dehydrogenase; Provisional	99.9
PRK07067	257	sorbitol dehydrogenase; Provisional	99.9
PRK05693	274	short chain dehydrogenase; Provisional	99.9
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.9
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	99.9
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.9
PRK12937	245	short chain dehydrogenase; Provisional	99.9
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	99.9
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	99.9
PRK06949	258	short chain dehydrogenase; Provisional	99.9
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	99.9
PRK08226	263	short chain dehydrogenase; Provisional	99.9
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.9
PRK12939	250	short chain dehydrogenase; Provisional	99.9
PRK06101	240	short chain dehydrogenase; Provisional	99.9
PRK10538	248	malonic semialdehyde reductase; Provisional	99.9
PRK05875	276	short chain dehydrogenase; Provisional	99.89
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	99.89
PRK06841	255	short chain dehydrogenase; Provisional	99.89
PRK07023	243	short chain dehydrogenase; Provisional	99.89
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	99.89
PRK06500	249	short chain dehydrogenase; Provisional	99.89
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.89
PRK06181	263	short chain dehydrogenase; Provisional	99.89
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	99.89
PRK08324	681	short chain dehydrogenase; Validated	99.89
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.89
PRK08264	238	short chain dehydrogenase; Validated	99.89
PRK07806	248	short chain dehydrogenase; Provisional	99.89
PRK07069	251	short chain dehydrogenase; Validated	99.89
PRK09135	249	pteridine reductase; Provisional	99.89
PRK06484	520	short chain dehydrogenase; Validated	99.89
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	99.89
TIGR02415	254	23BDH acetoin reductases. One member of this famil	99.89
PRK09072	263	short chain dehydrogenase; Provisional	99.89
PRK06947	248	glucose-1-dehydrogenase; Provisional	99.89
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	99.89
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	99.89
PLN00015	308	protochlorophyllide reductase	99.89
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	99.89
PRK12742	237	oxidoreductase; Provisional	99.89
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	99.89
PRK06123	248	short chain dehydrogenase; Provisional	99.88
PRK07832	272	short chain dehydrogenase; Provisional	99.88
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	99.88
PRK07201	657	short chain dehydrogenase; Provisional	99.88
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	99.88
PRK12744	257	short chain dehydrogenase; Provisional	99.88
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.88
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.88
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.88
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	99.88
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	99.88
PRK07577	234	short chain dehydrogenase; Provisional	99.88
PRK07060	245	short chain dehydrogenase; Provisional	99.88
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	99.88
PRK06940	275	short chain dehydrogenase; Provisional	99.88
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	99.88
PRK12828	239	short chain dehydrogenase; Provisional	99.88
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.88
PRK07074	257	short chain dehydrogenase; Provisional	99.88
PRK08703	239	short chain dehydrogenase; Provisional	99.88
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	99.88
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	99.88
PRK07041	230	short chain dehydrogenase; Provisional	99.87
PRK06057	255	short chain dehydrogenase; Provisional	99.87
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	99.87
PRK06484	520	short chain dehydrogenase; Validated	99.87
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.87
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	99.87
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.87
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	99.87
PRK06924	251	short chain dehydrogenase; Provisional	99.87
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	99.87
PRK05884	223	short chain dehydrogenase; Provisional	99.87
PRK12829	264	short chain dehydrogenase; Provisional	99.87
PRK06198	260	short chain dehydrogenase; Provisional	99.87
PRK07326	237	short chain dehydrogenase; Provisional	99.87
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.86
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	99.86
PRK08177	225	short chain dehydrogenase; Provisional	99.86
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	99.86
PRK07578	199	short chain dehydrogenase; Provisional	99.86
PLN02778	298	3,5-epimerase/4-reductase	99.86
PRK08017	256	oxidoreductase; Provisional	99.86
PLN02996	491	fatty acyl-CoA reductase	99.86
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	99.86
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.85
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	99.85
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.85
KOG1611	249	consensus Predicted short chain-type dehydrogenase	99.85
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.85
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	99.85
PRK06953	222	short chain dehydrogenase; Provisional	99.85
PRK08219	227	short chain dehydrogenase; Provisional	99.85
PRK09009	235	C factor cell-cell signaling protein; Provisional	99.84
PRK12367	245	short chain dehydrogenase; Provisional	99.84
COG1028	251	FabG Dehydrogenases with different specificities (	99.84
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.84
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	99.84
COG3320	382	Putative dehydrogenase domain of multifunctional n	99.84
CHL00194	317	ycf39 Ycf39; Provisional	99.84
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	99.83
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	99.83
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.83
PRK07201	657	short chain dehydrogenase; Provisional	99.83
PLN03209	576	translocon at the inner envelope of chloroplast su	99.83
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.8
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	99.8
PLN02260	668	probable rhamnose biosynthetic enzyme	99.8
PLN02503	605	fatty acyl-CoA reductase 2	99.8
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.79
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	99.77
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	99.77
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	99.76
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.76
PLN00016	378	RNA-binding protein; Provisional	99.75
PRK05865	854	hypothetical protein; Provisional	99.73
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	99.72
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	99.71
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	99.7
PRK06720	169	hypothetical protein; Provisional	99.64
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	99.62
PRK12320	699	hypothetical protein; Provisional	99.59
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	99.58
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	99.57
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	99.56
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	99.55
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	99.54
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	99.46
KOG2774	366	consensus NAD dependent epimerase [General functio	99.44
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	99.42
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	99.4
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	99.4
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	99.37
COG2910	211	Putative NADH-flavin reductase [General function p	99.27
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	99.24
PRK08309	177	short chain dehydrogenase; Provisional	99.12
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	99.09
PTZ00325	321	malate dehydrogenase; Provisional	99.05
PLN00106	323	malate dehydrogenase	99.05
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	98.9
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	98.78
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	98.78
PRK09620	229	hypothetical protein; Provisional	98.77
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	98.72
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	98.72
PRK12548	289	shikimate 5-dehydrogenase; Provisional	98.66
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	98.63
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	98.54
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	98.52
COG4982	866	3-oxoacyl-[acyl-carrier protein]	98.41
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	98.35
PRK05086	312	malate dehydrogenase; Provisional	98.33
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	98.31
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	98.26
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	98.25
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	98.23
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	98.15
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	98.15
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	98.14
KOG4288	283	consensus Predicted oxidoreductase [General functi	98.02
PRK14982	340	acyl-ACP reductase; Provisional	98.01
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	97.97
KOG2733	423	consensus Uncharacterized membrane protein [Functi	97.96
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	97.88
PF08643	299	DUF1776: Fungal family of unknown function (DUF177	97.84
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.78
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.76
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	97.73
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	97.69
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	97.69
COG0039	313	Mdh Malate/lactate dehydrogenases [Energy producti	97.59
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	97.55
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	97.5
PRK05442	326	malate dehydrogenase; Provisional	97.49
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	97.43
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	97.43
cd05293	312	LDH_1 A subgroup of L-lactate dehydrogenases. L-la	97.37
PLN00112	444	malate dehydrogenase (NADP); Provisional	97.34
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	97.32
cd05290	307	LDH_3 A subgroup of L-lactate dehydrogenases. L-la	97.32
PRK06223	307	malate dehydrogenase; Reviewed	97.31
cd00300	300	LDH_like L-lactate dehydrogenase-like enzymes. Mem	97.29
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	97.28
TIGR01772	312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	97.26
PLN02602	350	lactate dehydrogenase	97.25
PTZ00082	321	L-lactate dehydrogenase; Provisional	97.22
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	97.21
PTZ00117	319	malate dehydrogenase; Provisional	97.2
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	97.19
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	97.19
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.17
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	97.15
COG0569	225	TrkA K+ transport systems, NAD-binding component [	97.14
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	97.11
cd05292	308	LDH_2 A subgroup of L-lactate dehydrogenases. L-la	97.1
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	97.1
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	97.08
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	97.08
PF01118	121	Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi	97.06
PRK06849	389	hypothetical protein; Provisional	97.04
PRK09496	453	trkA potassium transporter peripheral membrane com	97.02
PLN02968	381	Probable N-acetyl-gamma-glutamyl-phosphate reducta	97.01
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	96.99
TIGR01757	387	Malate-DH_plant malate dehydrogenase, NADP-depende	96.97
PRK14874	334	aspartate-semialdehyde dehydrogenase; Provisional	96.92
COG3268	382	Uncharacterized conserved protein [Function unknow	96.9
cd05295	452	MDH_like Malate dehydrogenase-like. These MDH-like	96.89
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	96.86
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	96.86
PRK06129	308	3-hydroxyacyl-CoA dehydrogenase; Validated	96.85
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	96.82
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	96.79
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	96.78
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	96.72
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	96.68
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	96.66
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	96.63
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	96.6
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	96.59
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	96.56
PRK00436	343	argC N-acetyl-gamma-glutamyl-phosphate reductase;	96.55
TIGR01763	305	MalateDH_bact malate dehydrogenase, NAD-dependent.	96.54
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	96.53
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	96.51
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	96.49
PRK09496	453	trkA potassium transporter peripheral membrane com	96.49
cd01339	300	LDH-like_MDH L-lactate dehydrogenase-like malate d	96.48
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	96.46
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	96.46
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	96.46
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	96.44
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	96.43
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	96.36
PF12242	78	Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2	96.35
PRK13940	414	glutamyl-tRNA reductase; Provisional	96.35
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	96.29
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	96.29
PRK08664	349	aspartate-semialdehyde dehydrogenase; Reviewed	96.28
TIGR01771	299	L-LDH-NAD L-lactate dehydrogenase. This model repr	96.28
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	96.27
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	96.24
PRK08328	231	hypothetical protein; Provisional	96.21
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	96.21
PRK08306	296	dipicolinate synthase subunit A; Reviewed	96.2
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	96.2
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	96.18
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	96.16
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	96.15
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	96.15
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	96.15
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	96.09
TIGR01850	346	argC N-acetyl-gamma-glutamyl-phosphate reductase,	96.07
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.05
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	96.03
PRK07066	321	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.01
cd01489	312	Uba2_SUMO Ubiquitin activating enzyme (E1) subunit	96.0
PRK09310	477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	95.99
PRK05671	336	aspartate-semialdehyde dehydrogenase; Reviewed	95.94
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	95.94
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	95.9
COG0027	394	PurT Formate-dependent phosphoribosylglycinamide f	95.9
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	95.88
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	95.87
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	95.86
COG2130	340	Putative NADP-dependent oxidoreductases [General f	95.86
PRK09288	395	purT phosphoribosylglycinamide formyltransferase 2	95.86
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	95.85
PRK08223	287	hypothetical protein; Validated	95.81
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	95.8
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	95.8
TIGR01296	339	asd_B aspartate-semialdehyde dehydrogenase (peptid	95.79
COG2085	211	Predicted dinucleotide-binding enzymes [General fu	95.79
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	95.77
PRK00048	257	dihydrodipicolinate reductase; Provisional	95.73
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	95.72
PRK08057	248	cobalt-precorrin-6x reductase; Reviewed	95.72
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	95.71
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	95.67
cd08291	324	ETR_like_1 2-enoyl thioester reductase (ETR) like	95.66
PRK15116	268	sulfur acceptor protein CsdL; Provisional	95.65
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.58
PRK10669	558	putative cation:proton antiport protein; Provision	95.57
KOG3019	315	consensus Predicted nucleoside-diphosphate sugar e	95.54
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	95.54
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	95.53
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	95.53
cd01484	234	E1-2_like Ubiquitin activating enzyme (E1), repeat	95.52
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.52
PRK12767	326	carbamoyl phosphate synthase-like protein; Provisi	95.49
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	95.44
cd05311	226	NAD_bind_2_malic_enz NAD(P) binding domain of mali	95.41
PRK06019	372	phosphoribosylaminoimidazole carboxylase ATPase su	95.39
TIGR01142	380	purT phosphoribosylglycinamide formyltransferase 2	95.38
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	95.37
PRK04308	445	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.33
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	95.29
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	95.25
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	95.23
cd08290	341	ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi	95.21
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	95.18
PTZ00354	334	alcohol dehydrogenase; Provisional	95.16
KOG1494	345	consensus NAD-dependent malate dehydrogenase [Ener	95.16
PRK07878	392	molybdopterin biosynthesis-like protein MoeZ; Vali	95.11
PF02670	129	DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate re	95.11
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	95.03
cd08233	351	butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog	95.02
cd05280	325	MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone	95.01
PLN00203	519	glutamyl-tRNA reductase	94.95
cd01486	307	Apg7 Apg7 is an E1-like protein, that activates tw	94.95
cd08274	350	MDR9 Medium chain dehydrogenases/reductase (MDR)/z	94.94
PRK08655	437	prephenate dehydrogenase; Provisional	94.94
cd01488	291	Uba3_RUB Ubiquitin activating enzyme (E1) subunit	94.93
PF02737	180	3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind	94.92
cd08248	350	RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu	94.92
PF02571	249	CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro:	94.87
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	94.85
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	94.85
PRK10754	327	quinone oxidoreductase, NADPH-dependent; Provision	94.84
PLN02383	344	aspartate semialdehyde dehydrogenase	94.83
cd08297	341	CAD3 Cinnamyl alcohol dehydrogenases (CAD). These	94.81
PRK05447	385	1-deoxy-D-xylulose 5-phosphate reductoisomerase; P	94.8
TIGR03366	280	HpnZ_proposed putative phosphonate catabolism asso	94.8
PRK04148	134	hypothetical protein; Provisional	94.79
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	94.76
KOG1196	343	consensus Predicted NAD-dependent oxidoreductase [	94.74
COG1179	263	Dinucleotide-utilizing enzymes involved in molybdo	94.72
PRK14852	989	hypothetical protein; Provisional	94.7
PLN02740	381	Alcohol dehydrogenase-like	94.69
PLN02586	360	probable cinnamyl alcohol dehydrogenase	94.65
PRK07411	390	hypothetical protein; Validated	94.62
PRK11064	415	wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Pro	94.61
cd01079	197	NAD_bind_m-THF_DH NAD binding domain of methylene-	94.61
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.59
PRK10309	347	galactitol-1-phosphate dehydrogenase; Provisional	94.58
PRK13886	241	conjugal transfer protein TraL; Provisional	94.58
PRK14851	679	hypothetical protein; Provisional	94.57
PRK13303	265	L-aspartate dehydrogenase; Provisional	94.57
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	94.53
cd08231	361	MDR_TM0436_like Hypothetical enzyme TM0436 resembl	94.47
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	94.47

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=1e-33  Score=231.15  Aligned_cols=170  Identities=48%  Similarity=0.749  Sum_probs=156.2

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li  150 (248)
                      |+||||||+|+||+|++.+|++.|++|+++|+......+.....        ...++++|+.|.+.+.+++++.++|.||
T Consensus         1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~--------~~~f~~gDi~D~~~L~~vf~~~~idaVi   72 (329)
T COG1087           1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKL--------QFKFYEGDLLDRALLTAVFEENKIDAVV   72 (329)
T ss_pred             CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhc--------cCceEEeccccHHHHHHHHHhcCCCEEE
Confidence            57999999999999999999999999999998766544322211        1678999999999999999999999999


Q ss_pred             EcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCCChHHHHHHHHHHH
Q 025786          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDI  230 (248)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e~l  230 (248)
                      |+||....+.+.+.|.+++++|+.+|+.++++|++.++++|||.||+++||.+...|++|+.+..|.++||.||.+.|++
T Consensus        73 HFAa~~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv~~~vFSStAavYG~p~~~PI~E~~~~~p~NPYG~sKlm~E~i  152 (329)
T COG1087          73 HFAASISVGESVQNPLKYYDNNVVGTLNLIEAMLQTGVKKFIFSSTAAVYGEPTTSPISETSPLAPINPYGRSKLMSEEI  152 (329)
T ss_pred             ECccccccchhhhCHHHHHhhchHhHHHHHHHHHHhCCCEEEEecchhhcCCCCCcccCCCCCCCCCCcchhHHHHHHHH
Confidence            99999888889999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhcCCCcEEEEecC
Q 025786          231 ILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       231 ~~~~~~~~gi~~~~v~Pf  248 (248)
                      ++.+++.++++++++|=|
T Consensus       153 L~d~~~a~~~~~v~LRYF  170 (329)
T COG1087         153 LRDAAKANPFKVVILRYF  170 (329)
T ss_pred             HHHHHHhCCCcEEEEEec
Confidence            999999999999999855

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=99.97  E-value=2.7e-29  Score=207.17  Aligned_cols=178  Identities=52%  Similarity=0.814  Sum_probs=164.4

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li  150 (248)
                      ++||||||+|+||+|++.+|+++|+.|+++|+..+......+..+++...+..+.++++|+.|.+.++++|+...+|.|+
T Consensus         3 ~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~~fd~V~   82 (343)
T KOG1371|consen    3 KHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEVKFDAVM   82 (343)
T ss_pred             cEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhcCCceEE
Confidence            78999999999999999999999999999998777666666666666665678999999999999999999998899999


Q ss_pred             EcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCC-CCChHHHHHHHHHH
Q 025786          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQA-PINPYGKAKKMAED  229 (248)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~-~~~~Y~~sK~a~e~  229 (248)
                      |.|+....+.+.+.+..++.+|+.++.++++.|++.+.+.+|++||+.+||.+...|++|+.+.. |.++|+.+|.+.|.
T Consensus        83 Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~~~~~V~sssatvYG~p~~ip~te~~~t~~p~~pyg~tK~~iE~  162 (343)
T KOG1371|consen   83 HFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAHNVKALVFSSSATVYGLPTKVPITEEDPTDQPTNPYGKTKKAIEE  162 (343)
T ss_pred             eehhhhccchhhhCchhheehhhhhHHHHHHHHHHcCCceEEEecceeeecCcceeeccCcCCCCCCCCcchhhhHHHHH
Confidence            99999888888889999999999999999999999999999999999999999999999999988 99999999999999


Q ss_pred             HHHHHhhcCCCcEEEEecC
Q 025786          230 IILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       230 l~~~~~~~~gi~~~~v~Pf  248 (248)
                      +...+...++..++.+|-|
T Consensus       163 i~~d~~~~~~~~~~~LRyf  181 (343)
T KOG1371|consen  163 IIHDYNKAYGWKVTGLRYF  181 (343)
T ss_pred             HHHhhhccccceEEEEEec
Confidence            9999999988888888865

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=99.96  E-value=1.6e-28  Score=196.36  Aligned_cols=161  Identities=19%  Similarity=0.183  Sum_probs=130.5

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      |.++|||||+|||.++|+.|+++|++|++++|.   .+.+.+...++..  ..+..+..|++|.++++.+++.     ++
T Consensus         7 kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR---~drL~~la~~~~~--~~~~~~~~DVtD~~~~~~~i~~~~~~~g~   81 (246)
T COG4221           7 KVALITGASSGIGEATARALAEAGAKVVLAARR---EERLEALADEIGA--GAALALALDVTDRAAVEAAIEALPEEFGR   81 (246)
T ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecc---HHHHHHHHHhhcc--CceEEEeeccCCHHHHHHHHHHHHHhhCc
Confidence            899999999999999999999999999999964   3344444444422  5788999999999998877765     78


Q ss_pred             CCEEEEcccccccCCCCCCchhhHhh----hHHH----HHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYVGESTLDPLKYYHN----ITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (248)
Q Consensus       146 iD~li~~Ag~~~~~~~~~~~~~~~~~----~~~~----~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (248)
                      +|+||||||.....+..+...+.|+.    |+.+    +..++|.|.+++.+.||++||.++.           .+++..
T Consensus        82 iDiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~-----------~~y~~~  150 (246)
T COG4221          82 IDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGR-----------YPYPGG  150 (246)
T ss_pred             ccEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEecccccc-----------ccCCCC
Confidence            99999999987665544444445544    4443    5569999999998999999997764           456667


Q ss_pred             ChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          218 NPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      +.|++||+++.+|.+.++.+   .+|+++.+.|
T Consensus       151 ~vY~ATK~aV~~fs~~LR~e~~g~~IRVt~I~P  183 (246)
T COG4221         151 AVYGATKAAVRAFSLGLRQELAGTGIRVTVISP  183 (246)
T ss_pred             ccchhhHHHHHHHHHHHHHHhcCCCeeEEEecC
Confidence            89999999999999999988   4899999988

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=99.96  E-value=1.4e-28  Score=201.79  Aligned_cols=166  Identities=20%  Similarity=0.226  Sum_probs=133.9

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~  144 (248)
                      +++++|||||+|||.++|++|+++|++|+++.|+..+.+++.+.+++.  .+.++.++.+|+++++++.++.++     .
T Consensus         6 ~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~--~~v~v~vi~~DLs~~~~~~~l~~~l~~~~~   83 (265)
T COG0300           6 GKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDK--TGVEVEVIPADLSDPEALERLEDELKERGG   83 (265)
T ss_pred             CcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHh--hCceEEEEECcCCChhHHHHHHHHHHhcCC
Confidence            489999999999999999999999999999997655544444444432  245788999999999999887765     4


Q ss_pred             CCCEEEEcccccccCCCCCCch----hhHhhhHHH----HHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCC
Q 025786          145 AFDAVMHFAAVAYVGESTLDPL----KYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (248)
Q Consensus       145 ~iD~li~~Ag~~~~~~~~~~~~----~~~~~~~~~----~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~  216 (248)
                      .+|+||||||.....+..+.+.    +.++.|+.+    |..++|.|.+++.++||+++|.+++           .|.+.
T Consensus        84 ~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~-----------~p~p~  152 (265)
T COG0300          84 PIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGL-----------IPTPY  152 (265)
T ss_pred             cccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhc-----------CCCcc
Confidence            7999999999876665443333    344445443    6679999999998999999999887           45566


Q ss_pred             CChHHHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          217 INPYGKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                      .+.|++||+++..|.+.++.|   .|+.|++|.|.
T Consensus       153 ~avY~ATKa~v~~fSeaL~~EL~~~gV~V~~v~PG  187 (265)
T COG0300         153 MAVYSATKAFVLSFSEALREELKGTGVKVTAVCPG  187 (265)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEecC
Confidence            789999999999999999988   58999999983

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=99.96  E-value=3.4e-28  Score=211.11  Aligned_cols=177  Identities=26%  Similarity=0.336  Sum_probs=144.7

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhh-hhhcC-CCCceEEEEccCCCHHHHHHHhhcCCCC
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVL-QELFP-EPGRLQFIYADLGDAKAVNKFFSENAFD  147 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~iD  147 (248)
                      +|+|||||||||||++++++|+++|++|++++|............ ..... ...++.++.+|+.|.+++.++++  ++|
T Consensus        15 ~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~--~~d   92 (348)
T PRK15181         15 PKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACK--NVD   92 (348)
T ss_pred             CCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhh--CCC
Confidence            389999999999999999999999999999987543322111111 11100 11357889999999999998887  589


Q ss_pred             EEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCCChHHHHHHHH
Q 025786          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMA  227 (248)
Q Consensus       148 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~  227 (248)
                      +|||+|+.........++...++.|+.++.++++++++.+.+++|++||..+||.....+..|+.+..|.++|+.||.++
T Consensus        93 ~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~p~~~Y~~sK~~~  172 (348)
T PRK15181         93 YVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVN  172 (348)
T ss_pred             EEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeechHhhCCCCCCCCCCCCCCCCCChhhHHHHHH
Confidence            99999997654444456777899999999999999999988899999999999876666677877778889999999999


Q ss_pred             HHHHHHHhhcCCCcEEEEecC
Q 025786          228 EDIILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       228 e~l~~~~~~~~gi~~~~v~Pf  248 (248)
                      |.+++.++++++++++++|||
T Consensus       173 e~~~~~~~~~~~~~~~~lR~~  193 (348)
T PRK15181        173 ELYADVFARSYEFNAIGLRYF  193 (348)
T ss_pred             HHHHHHHHHHhCCCEEEEEec
Confidence            999999998899999999997

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.96  E-value=3.5e-28  Score=200.84  Aligned_cols=156  Identities=21%  Similarity=0.231  Sum_probs=127.8

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      |+|+|||||+|||.++|.+|+++|++++.+.|..++.+...+.+++..+.. ++..+++|++|.+++++++++     ++
T Consensus        13 kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~-~v~~~~~Dvs~~~~~~~~~~~~~~~fg~   91 (282)
T KOG1205|consen   13 KVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLE-KVLVLQLDVSDEESVKKFVEWAIRHFGR   91 (282)
T ss_pred             CEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcC-ccEEEeCccCCHHHHHHHHHHHHHhcCC
Confidence            999999999999999999999999999999887777776655555554433 699999999999999999855     89


Q ss_pred             CCEEEEcccccccCCCCCCchh----hHhhhHHH----HHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYVGESTLDPLK----YYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (248)
Q Consensus       146 iD~li~~Ag~~~~~~~~~~~~~----~~~~~~~~----~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (248)
                      +|+||||||+......+....+    .++.|+.+    |+.++|.|++++.|+||.+||++++           .+.+..
T Consensus        92 vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~-----------~~~P~~  160 (282)
T KOG1205|consen   92 VDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGK-----------MPLPFR  160 (282)
T ss_pred             CCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccc-----------cCCCcc
Confidence            9999999998764333333333    34455544    7779999999888899999998886           345556


Q ss_pred             ChHHHHHHHHHHHHHHHhhcC
Q 025786          218 NPYGKAKKMAEDIILDFSKNS  238 (248)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~~~~~  238 (248)
                      +.|++||+|.+.|.+.++.|+
T Consensus       161 ~~Y~ASK~Al~~f~etLR~El  181 (282)
T KOG1205|consen  161 SIYSASKHALEGFFETLRQEL  181 (282)
T ss_pred             cccchHHHHHHHHHHHHHHHh
Confidence            699999999999999999995

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.96  E-value=1.3e-27  Score=196.02  Aligned_cols=165  Identities=18%  Similarity=0.180  Sum_probs=135.3

Q ss_pred             CceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----
Q 025786           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (248)
Q Consensus        69 ~~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----  143 (248)
                      .+++||||||++|||+++|.+|+++|+++++.|.+....++..+..++.    +++..+.||++|.+++.+..++     
T Consensus        37 ~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~----g~~~~y~cdis~~eei~~~a~~Vk~e~  112 (300)
T KOG1201|consen   37 SGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKI----GEAKAYTCDISDREEIYRLAKKVKKEV  112 (300)
T ss_pred             cCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhc----CceeEEEecCCCHHHHHHHHHHHHHhc
Confidence            3499999999999999999999999999999997766665555554443    3799999999999999888766     


Q ss_pred             CCCCEEEEcccccccCCCCCCchhhHh----hhHHH----HHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCC
Q 025786          144 NAFDAVMHFAAVAYVGESTLDPLKYYH----NITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (248)
Q Consensus       144 ~~iD~li~~Ag~~~~~~~~~~~~~~~~----~~~~~----~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~  215 (248)
                      +++|+||||||+.......+.+++..+    .|..+    ++.++|.|.+.+.++||.++|++++           .+.+
T Consensus       113 G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~-----------~g~~  181 (300)
T KOG1201|consen  113 GDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGL-----------FGPA  181 (300)
T ss_pred             CCceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhcc-----------cCCc
Confidence            789999999999876665555544444    44433    6779999999888999999998876           3445


Q ss_pred             CCChHHHHHHHHHHHHHHHhhc------CCCcEEEEecC
Q 025786          216 PINPYGKAKKMAEDIILDFSKN------SDMAVLQCHRF  248 (248)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~~~~------~gi~~~~v~Pf  248 (248)
                      ...+|++||+|+..+.+++..|      .|++.+.+.||
T Consensus       182 gl~~YcaSK~a~vGfhesL~~EL~~~~~~~IktTlv~P~  220 (300)
T KOG1201|consen  182 GLADYCASKFAAVGFHESLSMELRALGKDGIKTTLVCPY  220 (300)
T ss_pred             cchhhhhhHHHHHHHHHHHHHHHHhcCCCCeeEEEEeee
Confidence            5789999999999999999876      47999999997

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=99.96  E-value=2.1e-27  Score=205.77  Aligned_cols=178  Identities=25%  Similarity=0.278  Sum_probs=141.2

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCc--chhhhhhhhhcC-CCCceEEEEccCCCHHHHHHHhhcCCCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGN--IGAVKVLQELFP-EPGRLQFIYADLGDAKAVNKFFSENAFD  147 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~--~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~iD  147 (248)
                      |+||||||+||||++++++|+++|++|++++|.....  +........... ...++.++.+|++|.+++.++++..++|
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d   80 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEIKPT   80 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhCCCC
Confidence            5899999999999999999999999999998764321  111111111100 1235889999999999999999876689


Q ss_pred             EEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCC---CEEEEeccceecCCCCCCCCCCCCCCCCCChHHHHH
Q 025786          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV---DTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAK  224 (248)
Q Consensus       148 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~---~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK  224 (248)
                      +|||+|+..........+...++.|..++.++++++.+.+.   .++|++||..+||.....+++|+.+..|.++|+.||
T Consensus        81 ~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK  160 (343)
T TIGR01472        81 EIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLGLIKSVKFYQASTSELYGKVQEIPQNETTPFYPRSPYAAAK  160 (343)
T ss_pred             EEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHhCCCcCeeEEEeccHHhhCCCCCCCCCCCCCCCCCChhHHHH
Confidence            99999997654333344556667788899999999988764   389999999999976666788999989999999999


Q ss_pred             HHHHHHHHHHhhcCCCcEEEEecC
Q 025786          225 KMAEDIILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       225 ~a~e~l~~~~~~~~gi~~~~v~Pf  248 (248)
                      .++|.+++.+++++++++++.++|
T Consensus       161 ~~~e~~~~~~~~~~~~~~~~~~~~  184 (343)
T TIGR01472       161 LYAHWITVNYREAYGLFAVNGILF  184 (343)
T ss_pred             HHHHHHHHHHHHHhCCceEEEeec
Confidence            999999999999889888777664

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.96  E-value=2e-27  Score=193.62  Aligned_cols=174  Identities=28%  Similarity=0.419  Sum_probs=149.8

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC--EEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~  148 (248)
                      |++|||||+||||++.++.++++..  +|+.+|...-.  ...+.+..+ ...++..++++|+.|.+.+.+++++.++|+
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYA--gn~~~l~~~-~~~~~~~fv~~DI~D~~~v~~~~~~~~~D~   77 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYA--GNLENLADV-EDSPRYRFVQGDICDRELVDRLFKEYQPDA   77 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCCCceEEEEeccccc--CCHHHHHhh-hcCCCceEEeccccCHHHHHHHHHhcCCCe
Confidence            5799999999999999999998864  57887754321  112233333 224589999999999999999999888999


Q ss_pred             EEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCC-EEEEeccceecCCCCCC--CCCCCCCCCCCChHHHHHH
Q 025786          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD-TLIYSSTCATYGEPEKM--PITEETPQAPINPYGKAKK  225 (248)
Q Consensus       149 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~-~iV~~SS~~~~g~~~~~--~~~e~~~~~~~~~Y~~sK~  225 (248)
                      |+|.|+-++...+...|+.+.+.|+.||.++|++.++...+ |++++|+-.+||.....  .++|++|+.|.++|++||+
T Consensus        78 VvhfAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTDEVYG~l~~~~~~FtE~tp~~PsSPYSASKA  157 (340)
T COG1088          78 VVHFAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHISTDEVYGDLGLDDDAFTETTPYNPSSPYSASKA  157 (340)
T ss_pred             EEEechhccccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEeccccccccccCCCCCcccCCCCCCCCCcchhhh
Confidence            99999998888888899999999999999999999998754 89999999999976543  6899999999999999999


Q ss_pred             HHHHHHHHHhhcCCCcEEEEec
Q 025786          226 MAEDIILDFSKNSDMAVLQCHR  247 (248)
Q Consensus       226 a~e~l~~~~~~~~gi~~~~v~P  247 (248)
                      ++.+++++|.+.+|+++++.|+
T Consensus       158 asD~lVray~~TYglp~~Itrc  179 (340)
T COG1088         158 ASDLLVRAYVRTYGLPATITRC  179 (340)
T ss_pred             hHHHHHHHHHHHcCCceEEecC
Confidence            9999999999999999999885

>PLN02572 UDP-sulfoquinovose synthase

Probab=99.95  E-value=7.3e-27  Score=208.31  Aligned_cols=180  Identities=27%  Similarity=0.316  Sum_probs=136.2

Q ss_pred             CCceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchh-------------hhhhhhhc-CCCCceEEEEccCCC
Q 025786           68 EGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGA-------------VKVLQELF-PEPGRLQFIYADLGD  133 (248)
Q Consensus        68 ~~~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~-------------~~~~~~~~-~~~~~~~~~~~Dl~~  133 (248)
                      ..+|+||||||+||||++++++|+++|++|+++++..++....             .+.++... ....++.++.+|++|
T Consensus        45 ~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~d  124 (442)
T PLN02572         45 SKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYVGDICD  124 (442)
T ss_pred             ccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEECCCCC
Confidence            4458999999999999999999999999999988643321110             01111110 012358899999999


Q ss_pred             HHHHHHHhhcCCCCEEEEcccccccCCCCCC---chhhHhhhHHHHHHHHHHHHHcCCC-EEEEeccceecCCCCCCCCC
Q 025786          134 AKAVNKFFSENAFDAVMHFAAVAYVGESTLD---PLKYYHNITSNTLVVLESMARHGVD-TLIYSSTCATYGEPEKMPIT  209 (248)
Q Consensus       134 ~~~~~~~~~~~~iD~li~~Ag~~~~~~~~~~---~~~~~~~~~~~~~~ll~~~~~~~~~-~iV~~SS~~~~g~~~~~~~~  209 (248)
                      .+++.+++++.++|+|||+|+.........+   .+..++.|+.++.++++.+++.+++ +||++||..+||... .+++
T Consensus       125 ~~~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv~~~~V~~SS~~vYG~~~-~~~~  203 (442)
T PLN02572        125 FEFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAPDCHLVKLGTMGEYGTPN-IDIE  203 (442)
T ss_pred             HHHHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCCCccEEEEecceecCCCC-CCCc
Confidence            9999999987679999999976433222222   2345678999999999999988764 899999999998542 1222


Q ss_pred             C-----------C---CCCCCCChHHHHHHHHHHHHHHHhhcCCCcEEEEecC
Q 025786          210 E-----------E---TPQAPINPYGKAKKMAEDIILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       210 e-----------~---~~~~~~~~Y~~sK~a~e~l~~~~~~~~gi~~~~v~Pf  248 (248)
                      |           +   .+..|.++|+.||.++|.+++.+++++|++++++|||
T Consensus       204 E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~gl~~v~lR~~  256 (442)
T PLN02572        204 EGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQG  256 (442)
T ss_pred             ccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHhcCCCEEEEecc
Confidence            2           2   2456778999999999999999999999999999996

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=99.95  E-value=8.6e-27  Score=201.65  Aligned_cols=177  Identities=24%  Similarity=0.311  Sum_probs=140.1

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCc--chhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGN--IGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~  148 (248)
                      |+||||||+||||++++++|+++|++|++++|.....  ...............++.++.+|++|.+++.++++..++|+
T Consensus         7 ~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~   86 (340)
T PLN02653          7 KVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDIKPDE   86 (340)
T ss_pred             CEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHcCCCE
Confidence            8899999999999999999999999999998754321  11111111111112468899999999999999998666899


Q ss_pred             EEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCC-----EEEEeccceecCCCCCCCCCCCCCCCCCChHHHH
Q 025786          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD-----TLIYSSTCATYGEPEKMPITEETPQAPINPYGKA  223 (248)
Q Consensus       149 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~-----~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~s  223 (248)
                      |||||+..........+...++.|..++.++++.+.+.+..     ++|++||..+||.... +++|+.+..|.++|+.|
T Consensus        87 Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~~~-~~~E~~~~~p~~~Y~~s  165 (340)
T PLN02653         87 VYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGSTPP-PQSETTPFHPRSPYAVA  165 (340)
T ss_pred             EEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCCCC-CCCCCCCCCCCChhHHH
Confidence            99999976443334455666788889999999999887653     8999999999987654 78899999999999999


Q ss_pred             HHHHHHHHHHHhhcCCCcEEEEecC
Q 025786          224 KKMAEDIILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       224 K~a~e~l~~~~~~~~gi~~~~v~Pf  248 (248)
                      |.++|.+++.++.++++.++..++|
T Consensus       166 K~~~e~~~~~~~~~~~~~~~~~~~~  190 (340)
T PLN02653        166 KVAAHWYTVNYREAYGLFACNGILF  190 (340)
T ss_pred             HHHHHHHHHHHHHHcCCeEEEeeec
Confidence            9999999999999998877766654

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=99.95  E-value=1.3e-26  Score=201.32  Aligned_cols=174  Identities=24%  Similarity=0.289  Sum_probs=141.6

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li  150 (248)
                      |+||||||+||||+++++.|+++|++|++++|..........   .+. ...++.++.+|++|.+++.+++++.++|+||
T Consensus         5 k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~---~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi   80 (349)
T TIGR02622         5 KKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFE---LLN-LAKKIEDHFGDIRDAAKLRKAIAEFKPEIVF   80 (349)
T ss_pred             CEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHH---HHh-hcCCceEEEccCCCHHHHHHHHhhcCCCEEE
Confidence            899999999999999999999999999999875433221111   111 1235778999999999999999876789999


Q ss_pred             EcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcC-CCEEEEeccceecCCCCC-CCCCCCCCCCCCChHHHHHHHHH
Q 025786          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHG-VDTLIYSSTCATYGEPEK-MPITEETPQAPINPYGKAKKMAE  228 (248)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~-~~~iV~~SS~~~~g~~~~-~~~~e~~~~~~~~~Y~~sK~a~e  228 (248)
                      |+||.........++...++.|+.++.++++++.+.+ .++||++||..+|+.... .+++|+.+..|.++|+.||.++|
T Consensus        81 h~A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~~e~~~~~p~~~Y~~sK~~~e  160 (349)
T TIGR02622        81 HLAAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVTSDKCYRNDEWVWGYRETDPLGGHDPYSSSKACAE  160 (349)
T ss_pred             ECCcccccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEechhhhCCCCCCCCCccCCCCCCCCcchhHHHHHH
Confidence            9999654444445667788899999999999998765 679999999999986432 35778888888999999999999


Q ss_pred             HHHHHHhhcC-------CCcEEEEecC
Q 025786          229 DIILDFSKNS-------DMAVLQCHRF  248 (248)
Q Consensus       229 ~l~~~~~~~~-------gi~~~~v~Pf  248 (248)
                      .+++.++.++       +++++++||+
T Consensus       161 ~~~~~~~~~~~~~~~~~~i~~~~lR~~  187 (349)
T TIGR02622       161 LVIASYRSSFFGVANFHGIKIASARAG  187 (349)
T ss_pred             HHHHHHHHHhhcccccCCCcEEEEccC
Confidence            9999998764       8999999996

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PLN02240 UDP-glucose 4-epimerase

Probab=99.95  E-value=2.5e-26  Score=199.52  Aligned_cols=178  Identities=42%  Similarity=0.715  Sum_probs=144.8

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhc-CCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELF-PEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~l  149 (248)
                      ++|+||||+|+||++++++|+++|++|++++|..+............. ....++.++.+|++|.+++.+++++.++|+|
T Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~d~v   85 (352)
T PLN02240          6 RTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFASTRFDAV   85 (352)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhCCCCEE
Confidence            899999999999999999999999999999864332221111122211 1134678899999999999999876679999


Q ss_pred             EEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCCChHHHHHHHHHH
Q 025786          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAED  229 (248)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e~  229 (248)
                      ||+|+..........+...++.|..++.++++++.+.+.+++|++||..+|+.....+++|+.+..+.++|+.||.++|+
T Consensus        86 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~  165 (352)
T PLN02240         86 IHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKHGCKKLVFSSSATVYGQPEEVPCTEEFPLSATNPYGRTKLFIEE  165 (352)
T ss_pred             EEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Confidence            99999754333445667788999999999999998888889999999999987767789999999999999999999999


Q ss_pred             HHHHHhhc-CCCcEEEEecC
Q 025786          230 IILDFSKN-SDMAVLQCHRF  248 (248)
Q Consensus       230 l~~~~~~~-~gi~~~~v~Pf  248 (248)
                      +++.++.+ .+++++++|||
T Consensus       166 ~~~~~~~~~~~~~~~~~R~~  185 (352)
T PLN02240        166 ICRDIHASDPEWKIILLRYF  185 (352)
T ss_pred             HHHHHHHhcCCCCEEEEeec
Confidence            99998765 68999999864

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=99.95  E-value=2.1e-26  Score=200.26  Aligned_cols=176  Identities=26%  Similarity=0.380  Sum_probs=138.3

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEE-EecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTI-VDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~  148 (248)
                      |++|||||||||||++++++|+++|++|++ +++... ..... .+.... ...++.++.+|++|.+++++++++.++|+
T Consensus         1 ~~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~-~~~~~-~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~   77 (355)
T PRK10217          1 MRKILITGGAGFIGSALVRYIINETSDAVVVVDKLTY-AGNLM-SLAPVA-QSERFAFEKVDICDRAELARVFTEHQPDC   77 (355)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCcc-ccchh-hhhhcc-cCCceEEEECCCcChHHHHHHHhhcCCCE
Confidence            579999999999999999999999987554 443221 11111 111111 12357788999999999999998767999


Q ss_pred             EEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHc---------CCCEEEEeccceecCCCC--CCCCCCCCCCCCC
Q 025786          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARH---------GVDTLIYSSTCATYGEPE--KMPITEETPQAPI  217 (248)
Q Consensus       149 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~---------~~~~iV~~SS~~~~g~~~--~~~~~e~~~~~~~  217 (248)
                      |||+||........+.+...++.|+.++.++++++.+.         +.+++|++||.++||...  ..+++|+.+..|.
T Consensus        78 Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~E~~~~~p~  157 (355)
T PRK10217         78 VMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPS  157 (355)
T ss_pred             EEECCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCCCCcCCCCCCCCC
Confidence            99999975443333456778889999999999999762         346999999999998542  3468888888889


Q ss_pred             ChHHHHHHHHHHHHHHHhhcCCCcEEEEecC
Q 025786          218 NPYGKAKKMAEDIILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~~~~~gi~~~~v~Pf  248 (248)
                      +.|+.||.++|.+++.++++++++++++||+
T Consensus       158 s~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~  188 (355)
T PRK10217        158 SPYSASKASSDHLVRAWLRTYGLPTLITNCS  188 (355)
T ss_pred             ChhHHHHHHHHHHHHHHHHHhCCCeEEEeee
Confidence            9999999999999999999999999999985

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=99.95  E-value=4.9e-26  Score=195.71  Aligned_cols=175  Identities=23%  Similarity=0.258  Sum_probs=135.8

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li  150 (248)
                      |+||||||+||||++++++|+++|++|++++|............ .......++.++.+|++|.+++.++++  ++|+||
T Consensus         6 k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~vi   82 (325)
T PLN02989          6 KVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLL-ALDGAKERLKLFKADLLDEGSFELAID--GCETVF   82 (325)
T ss_pred             CEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHH-hccCCCCceEEEeCCCCCchHHHHHHc--CCCEEE
Confidence            89999999999999999999999999998876543322211111 111112468889999999999999887  689999


Q ss_pred             EcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHc-CCCEEEEeccceecCCC-----CCCCCCCCCCCCC------CC
Q 025786          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARH-GVDTLIYSSTCATYGEP-----EKMPITEETPQAP------IN  218 (248)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~-~~~~iV~~SS~~~~g~~-----~~~~~~e~~~~~~------~~  218 (248)
                      ||||........+.....++.|..++.++++++.+. +.++||++||.++|+..     ...+++|+.+..|      .+
T Consensus        83 h~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~  162 (325)
T PLN02989         83 HTASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSSMAAVLAPETKLGPNDVVDETFFTNPSFAEERKQ  162 (325)
T ss_pred             EeCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecchhheecCCccCCCCCccCcCCCCchhHhccccc
Confidence            999965432223344567788999999999999875 46799999998776543     2345778876654      36


Q ss_pred             hHHHHHHHHHHHHHHHhhcCCCcEEEEecC
Q 025786          219 PYGKAKKMAEDIILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       219 ~Y~~sK~a~e~l~~~~~~~~gi~~~~v~Pf  248 (248)
                      +|+.||.++|.+++.++++++++++++||+
T Consensus       163 ~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~  192 (325)
T PLN02989        163 WYVLSKTLAEDAAWRFAKDNEIDLIVLNPG  192 (325)
T ss_pred             chHHHHHHHHHHHHHHHHHcCCeEEEEcCC
Confidence            799999999999999999999999999996

>PLN02214 cinnamoyl-CoA reductase

Probab=99.95  E-value=9.2e-26  Score=195.43  Aligned_cols=171  Identities=25%  Similarity=0.283  Sum_probs=135.9

Q ss_pred             CceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 025786           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (248)
Q Consensus        69 ~~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~  148 (248)
                      .+|+|+||||+||||++++++|+++|++|++++|.......  ..+..+.....++.++.+|++|.+++.++++  ++|+
T Consensus         9 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~   84 (342)
T PLN02214          9 AGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKN--THLRELEGGKERLILCKADLQDYEALKAAID--GCDG   84 (342)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhH--HHHHHhhCCCCcEEEEecCcCChHHHHHHHh--cCCE
Confidence            34899999999999999999999999999999875432111  1112221112358889999999999999887  6899


Q ss_pred             EEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccc-eecCCCCC---CCCCCCC------CCCCCC
Q 025786          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTC-ATYGEPEK---MPITEET------PQAPIN  218 (248)
Q Consensus       149 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~-~~~g~~~~---~~~~e~~------~~~~~~  218 (248)
                      |||+|+..     ...+.+.++.|+.++.++++++.+.+.++||++||. ++||....   .+++|+.      +..+.+
T Consensus        85 Vih~A~~~-----~~~~~~~~~~nv~gt~~ll~aa~~~~v~r~V~~SS~~avyg~~~~~~~~~~~E~~~~~~~~~~~p~~  159 (342)
T PLN02214         85 VFHTASPV-----TDDPEQMVEPAVNGAKFVINAAAEAKVKRVVITSSIGAVYMDPNRDPEAVVDESCWSDLDFCKNTKN  159 (342)
T ss_pred             EEEecCCC-----CCCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeccceeeeccCCCCCCcccCcccCCChhhcccccc
Confidence            99999854     234567788999999999999999888899999996 57874332   2467764      334677


Q ss_pred             hHHHHHHHHHHHHHHHhhcCCCcEEEEecC
Q 025786          219 PYGKAKKMAEDIILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       219 ~Y~~sK~a~e~l~~~~~~~~gi~~~~v~Pf  248 (248)
                      +|+.||.++|.+++.+++++|++++++||+
T Consensus       160 ~Y~~sK~~aE~~~~~~~~~~g~~~v~lRp~  189 (342)
T PLN02214        160 WYCYGKMVAEQAAWETAKEKGVDLVVLNPV  189 (342)
T ss_pred             HHHHHHHHHHHHHHHHHHHcCCcEEEEeCC
Confidence            899999999999999999999999999996

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=99.95  E-value=3.2e-26  Score=191.64  Aligned_cols=176  Identities=24%  Similarity=0.249  Sum_probs=143.5

Q ss_pred             CceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 025786           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (248)
Q Consensus        69 ~~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~  148 (248)
                      ++++|+|||||||||++++++|+++||.|..+.|++.+ ++..+.+.++...+.+...+..|++|++++.++++  ++|+
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~-~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~--gcdg   81 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPED-EKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAID--GCDG   81 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcch-hhhHHHHHhcccCcccceEEeccccccchHHHHHh--CCCE
Confidence            44899999999999999999999999999999987655 23334456665556679999999999999999998  7999


Q ss_pred             EEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcC-CCEEEEeccceecCCC-----CCCCCCCCCCCCC------
Q 025786          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHG-VDTLIYSSTCATYGEP-----EKMPITEETPQAP------  216 (248)
Q Consensus       149 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~-~~~iV~~SS~~~~g~~-----~~~~~~e~~~~~~------  216 (248)
                      |+|.|........+ ...+..+..+.|+.+++++|++.. .+|||++||.++....     +...++|+...++      
T Consensus        82 VfH~Asp~~~~~~~-~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aAv~~~~~~~~~~~vvdE~~wsd~~~~~~~  160 (327)
T KOG1502|consen   82 VFHTASPVDFDLED-PEKELIDPAVKGTKNVLEACKKTKSVKRVVYTSSTAAVRYNGPNIGENSVVDEESWSDLDFCRCK  160 (327)
T ss_pred             EEEeCccCCCCCCC-cHHhhhhHHHHHHHHHHHHHhccCCcceEEEeccHHHhccCCcCCCCCcccccccCCcHHHHHhh
Confidence            99999976543332 333678888999999999999987 8999999998765432     2345667665433      


Q ss_pred             CChHHHHHHHHHHHHHHHhhcCCCcEEEEecC
Q 025786          217 INPYGKAKKMAEDIILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~~~~~gi~~~~v~Pf  248 (248)
                      ...|..||..+|+.++.++++.+++.+.+.|.
T Consensus       161 ~~~Y~~sK~lAEkaAw~fa~e~~~~lv~inP~  192 (327)
T KOG1502|consen  161 KLWYALSKTLAEKAAWEFAKENGLDLVTINPG  192 (327)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCccEEEecCC
Confidence            24799999999999999999999999999984

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=99.95  E-value=6.9e-26  Score=195.68  Aligned_cols=176  Identities=37%  Similarity=0.654  Sum_probs=141.3

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li  150 (248)
                      |+|+||||+|+||++++++|+++|++|++++|..++.......+.+..  ..++.++.+|++|.+++.++++..++|+||
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vv   78 (338)
T PRK10675          1 MRVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLG--GKHPTFVEGDIRNEALLTEILHDHAIDTVI   78 (338)
T ss_pred             CeEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhc--CCCceEEEccCCCHHHHHHHHhcCCCCEEE
Confidence            479999999999999999999999999998764333222111122221  235678899999999999998766799999


Q ss_pred             EcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCC-CCCChHHHHHHHHHH
Q 025786          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQ-APINPYGKAKKMAED  229 (248)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~-~~~~~Y~~sK~a~e~  229 (248)
                      |+|+..........+.+.+..|..++.++++.|++.+.++||++||..+||.....+++|+.+. .|.+.|+.+|.++|+
T Consensus        79 h~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~yg~~~~~~~~E~~~~~~p~~~Y~~sK~~~E~  158 (338)
T PRK10675         79 HFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNLIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQ  158 (338)
T ss_pred             ECCccccccchhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhhCCCCCCccccccCCCCCCChhHHHHHHHHH
Confidence            9999764333334556788899999999999999988889999999999987666678888876 678999999999999


Q ss_pred             HHHHHhhc-CCCcEEEEecC
Q 025786          230 IILDFSKN-SDMAVLQCHRF  248 (248)
Q Consensus       230 l~~~~~~~-~gi~~~~v~Pf  248 (248)
                      +++.++++ .+++++++||+
T Consensus       159 ~~~~~~~~~~~~~~~ilR~~  178 (338)
T PRK10675        159 ILTDLQKAQPDWSIALLRYF  178 (338)
T ss_pred             HHHHHHHhcCCCcEEEEEee
Confidence            99999876 47899999863

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=99.94  E-value=9.9e-27  Score=216.91  Aligned_cols=231  Identities=18%  Similarity=0.223  Sum_probs=167.2

Q ss_pred             CCccccccccCCCCccccccCcccCCCCCcchhHHHHHHHHHHHHHHHHHhhCCCCCCCCCCCCCCCCCceEEEEecCCc
Q 025786            1 MLNFGRARTQQRQTRPTSFGGLDYADPKRKSNFAGKFILAAALTALCIFLLKQSPTFSSPSPFSQHEEGVTHVLVTGGAG   80 (248)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~vlITGasg   80 (248)
                      |+++|+++..+|..++++.+++.   ..++.+.++.+..+.....+-+.+|.....+...++......+ |++|||||+|
T Consensus       349 ~~~~g~~~~~a~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~f~~eyw~~e~~kl~~~~~~~~l~g-kvvLVTGasg  424 (676)
T TIGR02632       349 MISFGKDKETARVAREFYVNAIN---VMRGAEAVSEYVSLPEQEAFDIEYWPLEEAKLRRMPKEKTLAR-RVAFVTGGAG  424 (676)
T ss_pred             eEEecCCHHHhhhhHHHHHHHHH---HHhhhhcccceecCchhhccchhhhhhhHHhhccCCCCcCCCC-CEEEEeCCCc
Confidence            78999999999999999999888   6666677777777666666666666544444434333333344 9999999999


Q ss_pred             hhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CCCCEEEEcccc
Q 025786           81 YIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NAFDAVMHFAAV  155 (248)
Q Consensus        81 ~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~iD~li~~Ag~  155 (248)
                      |||++++++|+++|++|++++|+....+...+.+.... ....+..+++|++|.+++.+++++     +++|+||||||.
T Consensus       425 gIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~-~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~g~iDilV~nAG~  503 (676)
T TIGR02632       425 GIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQF-GAGRAVALKMDVTDEQAVKAAFADVALAYGGVDIVVNNAGI  503 (676)
T ss_pred             HHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhc-CCCcEEEEECCCCCHHHHHHHHHHHHHhcCCCcEEEECCCC
Confidence            99999999999999999999875433222222221111 123577899999999999988875     579999999997


Q ss_pred             cccCCCCCCchhhHhhhH----HH----HHHHHHHHHHcC-CCEEEEeccceecCCCCCCCCCCCCCCCCCChHHHHHHH
Q 025786          156 AYVGESTLDPLKYYHNIT----SN----TLVVLESMARHG-VDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKM  226 (248)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~----~~----~~~ll~~~~~~~-~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a  226 (248)
                      .......+.+.+.|..++    .+    +..+++.|++.+ .++||++||...+.           +.+...+|+.||++
T Consensus       504 ~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~-----------~~~~~~aY~aSKaA  572 (676)
T TIGR02632       504 ATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVY-----------AGKNASAYSAAKAA  572 (676)
T ss_pred             CCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcC-----------CCCCCHHHHHHHHH
Confidence            654444444444444333    33    334567776654 46899999965542           23346799999999


Q ss_pred             HHHHHHHHhhc---CCCcEEEEec
Q 025786          227 AEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       227 ~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      .+++++.++.+   .|++++.|+|
T Consensus       573 ~~~l~r~lA~el~~~gIrVn~V~P  596 (676)
T TIGR02632       573 EAHLARCLAAEGGTYGIRVNTVNP  596 (676)
T ss_pred             HHHHHHHHHHHhcccCeEEEEEEC
Confidence            99999999987   4799999998

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=99.94  E-value=1.1e-25  Score=195.42  Aligned_cols=168  Identities=20%  Similarity=0.359  Sum_probs=134.5

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHC-CCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCC-CHHHHHHHhhcCCCC
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKD-SYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG-DAKAVNKFFSENAFD  147 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-~~~~~~~~~~~~~iD  147 (248)
                      ||+||||||+|+||++++++|+++ |++|++++|...+   .    ..+.. ...+.++.+|++ +.+.+.++++  ++|
T Consensus         1 m~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~---~----~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~--~~d   70 (347)
T PRK11908          1 MKKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDR---L----GDLVN-HPRMHFFEGDITINKEWIEYHVK--KCD   70 (347)
T ss_pred             CcEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHH---H----HHhcc-CCCeEEEeCCCCCCHHHHHHHHc--CCC
Confidence            478999999999999999999986 6999999863211   1    11111 235889999998 7777877776  689


Q ss_pred             EEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCC-------CCCChH
Q 025786          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQ-------APINPY  220 (248)
Q Consensus       148 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~-------~~~~~Y  220 (248)
                      +|||+|+...+.....+++..++.|+.+++++++++++.+ .++|++||..+||.....+++|+.+.       .|.+.|
T Consensus        71 ~ViH~aa~~~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~~-~~~v~~SS~~vyg~~~~~~~~ee~~~~~~~~~~~p~~~Y  149 (347)
T PRK11908         71 VILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG-KHLVFPSTSEVYGMCPDEEFDPEASPLVYGPINKPRWIY  149 (347)
T ss_pred             EEEECcccCChHHhhcCcHHHHHHHHHHHHHHHHHHHhcC-CeEEEEecceeeccCCCcCcCccccccccCcCCCccchH
Confidence            9999999765444455677788899999999999999876 79999999999986555556655421       356689


Q ss_pred             HHHHHHHHHHHHHHhhcCCCcEEEEecC
Q 025786          221 GKAKKMAEDIILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       221 ~~sK~a~e~l~~~~~~~~gi~~~~v~Pf  248 (248)
                      +.||.++|++++.++.+++++++++|||
T Consensus       150 ~~sK~~~e~~~~~~~~~~~~~~~ilR~~  177 (347)
T PRK11908        150 ACSKQLMDRVIWAYGMEEGLNFTLFRPF  177 (347)
T ss_pred             HHHHHHHHHHHHHHHHHcCCCeEEEeee
Confidence            9999999999999999899999999986

>PLN02427 UDP-apiose/xylose synthase

Probab=99.94  E-value=1.3e-25  Score=197.54  Aligned_cols=172  Identities=21%  Similarity=0.325  Sum_probs=131.5

Q ss_pred             eEEEEecCCchhHHHHHHHHHHC-CCEEEEEecCCCCcchhhhhhhhhc-CCCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKD-SYRVTIVDNLSRGNIGAVKVLQELF-PEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~  148 (248)
                      |+|||||||||||++++++|+++ |++|++++|+.....   ....... ....+++++.+|++|.+.+.++++  ++|+
T Consensus        15 ~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~---~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~--~~d~   89 (386)
T PLN02427         15 LTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIK---HLLEPDTVPWSGRIQFHRINIKHDSRLEGLIK--MADL   89 (386)
T ss_pred             cEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhh---hhhccccccCCCCeEEEEcCCCChHHHHHHhh--cCCE
Confidence            78999999999999999999998 599999986532211   1110000 112368999999999999999887  5899


Q ss_pred             EEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCC--------------
Q 025786          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQ--------------  214 (248)
Q Consensus       149 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~--------------  214 (248)
                      |||+|+..........+.+.+..|+.++.++++++.+.+ ++||++||..+||...+.+++|+.+.              
T Consensus        90 ViHlAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~~-~r~v~~SS~~vYg~~~~~~~~e~~p~~~~~~~~~~~e~~~  168 (386)
T PLN02427         90 TINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDHPLRQDPAFYVLKEDES  168 (386)
T ss_pred             EEEcccccChhhhhhChHHHHHHHHHHHHHHHHHHHhcC-CEEEEEeeeeeeCCCcCCCCCccccccccccccccccccc
Confidence            999999754433334555667788889999999998776 79999999999986543333332221              


Q ss_pred             --------CCCChHHHHHHHHHHHHHHHhhcCCCcEEEEecC
Q 025786          215 --------APINPYGKAKKMAEDIILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       215 --------~~~~~Y~~sK~a~e~l~~~~~~~~gi~~~~v~Pf  248 (248)
                              .+.+.|+.||.++|++++.++.+++++++++||+
T Consensus       169 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilR~~  210 (386)
T PLN02427        169 PCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPF  210 (386)
T ss_pred             ccccCCCCccccchHHHHHHHHHHHHHHHhhcCCceEEeccc
Confidence                    2345799999999999999998899999999996

>PRK08339 short chain dehydrogenase; Provisional

Probab=99.94  E-value=2.1e-25  Score=186.50  Aligned_cols=164  Identities=16%  Similarity=0.153  Sum_probs=124.6

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc----CCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----NAF  146 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~----~~i  146 (248)
                      |+++||||++|||++++++|+++|++|++++|+..+.++..+.+++.  .+.++.++++|++|++++++++++    +++
T Consensus         9 k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~Dv~~~~~i~~~~~~~~~~g~i   86 (263)
T PRK08339          9 KLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSE--SNVDVSYIVADLTKREDLERTVKELKNIGEP   86 (263)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhh--cCCceEEEEecCCCHHHHHHHHHHHHhhCCC
Confidence            89999999999999999999999999999987543322222222221  134688999999999999888875    679


Q ss_pred             CEEEEcccccccCCCCCCchhhHh----hhHHH----HHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCCC
Q 025786          147 DAVMHFAAVAYVGESTLDPLKYYH----NITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPIN  218 (248)
Q Consensus       147 D~li~~Ag~~~~~~~~~~~~~~~~----~~~~~----~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~  218 (248)
                      |++|||||........+.+.+.|+    .|..+    ++.+++.|++++.++||++||.+.+.           +.+...
T Consensus        87 D~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~~-----------~~~~~~  155 (263)
T PRK08339         87 DIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIKE-----------PIPNIA  155 (263)
T ss_pred             cEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccccC-----------CCCcch
Confidence            999999997544433333334443    33332    55688888887778999999977642           333466


Q ss_pred             hHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          219 PYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       219 ~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      .|+.+|++.+.+++.++.+   +||++++|.|
T Consensus       156 ~y~asKaal~~l~~~la~el~~~gIrVn~v~P  187 (263)
T PRK08339        156 LSNVVRISMAGLVRTLAKELGPKGITVNGIMP  187 (263)
T ss_pred             hhHHHHHHHHHHHHHHHHHhcccCeEEEEEEe
Confidence            8999999999999999988   5799999998

>PRK05854 short chain dehydrogenase; Provisional

Probab=99.94  E-value=3e-25  Score=190.02  Aligned_cols=176  Identities=16%  Similarity=0.107  Sum_probs=130.2

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~  144 (248)
                      +|+++||||++|||++++++|+++|++|++++|+..+.++..+.+.+.. ...++.++++|++|.+++++++++     +
T Consensus        14 gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~-~~~~v~~~~~Dl~d~~sv~~~~~~~~~~~~   92 (313)
T PRK05854         14 GKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAV-PDAKLSLRALDLSSLASVAALGEQLRAEGR   92 (313)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhC-CCCceEEEEecCCCHHHHHHHHHHHHHhCC
Confidence            4999999999999999999999999999999976544333333333221 123688899999999999988875     5


Q ss_pred             CCCEEEEcccccccCC---CCCCchhhHhhhHHH----HHHHHHHHHHcCCCEEEEeccceec-CCCCCCCCCCCCCCCC
Q 025786          145 AFDAVMHFAAVAYVGE---STLDPLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATY-GEPEKMPITEETPQAP  216 (248)
Q Consensus       145 ~iD~li~~Ag~~~~~~---~~~~~~~~~~~~~~~----~~~ll~~~~~~~~~~iV~~SS~~~~-g~~~~~~~~e~~~~~~  216 (248)
                      ++|+||||||+.....   ..+..+..+..|..+    +..+++.|.+. .++||++||.+.+ +.....++.+..+..+
T Consensus        93 ~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~-~~riv~vsS~~~~~~~~~~~~~~~~~~~~~  171 (313)
T PRK05854         93 PIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAG-RARVTSQSSIAARRGAINWDDLNWERSYAG  171 (313)
T ss_pred             CccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhC-CCCeEEEechhhcCCCcCcccccccccCcc
Confidence            7999999999864322   223344556667666    44566666654 4689999997664 3333333444455667


Q ss_pred             CChHHHHHHHHHHHHHHHhhc-----CCCcEEEEec
Q 025786          217 INPYGKAKKMAEDIILDFSKN-----SDMAVLQCHR  247 (248)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~~~~-----~gi~~~~v~P  247 (248)
                      ...|+.||++.+.++++++.+     .||.+++++|
T Consensus       172 ~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~P  207 (313)
T PRK05854        172 MRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHP  207 (313)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEec
Confidence            789999999999999999864     4799999998

>PLN00198 anthocyanidin reductase; Provisional

Probab=99.94  E-value=3.8e-25  Score=191.25  Aligned_cols=173  Identities=22%  Similarity=0.308  Sum_probs=131.9

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~l  149 (248)
                      +++||||||+||||++++++|+++|++|+++.|......... ....+ ...+++.++.+|++|.+++.++++  ++|+|
T Consensus         9 ~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~v   84 (338)
T PLN00198          9 KKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIA-HLRAL-QELGDLKIFGADLTDEESFEAPIA--GCDLV   84 (338)
T ss_pred             CCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHH-HHHhc-CCCCceEEEEcCCCChHHHHHHHh--cCCEE
Confidence            388999999999999999999999999988876533211111 11111 111357889999999999999887  68999


Q ss_pred             EEcccccccCCCCCCc-hhhHhhhHHHHHHHHHHHHHc-CCCEEEEeccceecCCCC----CCCCCCCC---------CC
Q 025786          150 MHFAAVAYVGESTLDP-LKYYHNITSNTLVVLESMARH-GVDTLIYSSTCATYGEPE----KMPITEET---------PQ  214 (248)
Q Consensus       150 i~~Ag~~~~~~~~~~~-~~~~~~~~~~~~~ll~~~~~~-~~~~iV~~SS~~~~g~~~----~~~~~e~~---------~~  214 (248)
                      ||+|+....  ....+ ...++.|+.++.++++++.+. +.++||++||.++|+...    ..+++|+.         +.
T Consensus        85 ih~A~~~~~--~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~~~g~~~~~~~~~~~~E~~~~~~~~~~~~~  162 (338)
T PLN00198         85 FHVATPVNF--ASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAAAVSINKLSGTGLVMNEKNWTDVEFLTSEK  162 (338)
T ss_pred             EEeCCCCcc--CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecceeeeccCCCCCCceeccccCCchhhhhhcC
Confidence            999985321  11233 245688999999999999876 468999999999997432    23344442         34


Q ss_pred             CCCChHHHHHHHHHHHHHHHhhcCCCcEEEEecC
Q 025786          215 APINPYGKAKKMAEDIILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       215 ~~~~~Y~~sK~a~e~l~~~~~~~~gi~~~~v~Pf  248 (248)
                      +|.++|+.||.++|.+++.++++++++++++|||
T Consensus       163 ~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~R~~  196 (338)
T PLN00198        163 PPTWGYPASKTLAEKAAWKFAEENNIDLITVIPT  196 (338)
T ss_pred             CccchhHHHHHHHHHHHHHHHHhcCceEEEEeCC
Confidence            5678899999999999999999999999999996

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=99.94  E-value=7.3e-25  Score=190.61  Aligned_cols=172  Identities=23%  Similarity=0.301  Sum_probs=130.7

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li  150 (248)
                      |+||||||+||||++++++|+++|++|++++|.....   ......+. ...++.++.+|++|.+++.++++  ++|+||
T Consensus        11 ~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~---~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~--~~d~Vi   84 (353)
T PLN02896         11 GTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKS---LHLLSKWK-EGDRLRLFRADLQEEGSFDEAVK--GCDGVF   84 (353)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHH---HHHHHhhc-cCCeEEEEECCCCCHHHHHHHHc--CCCEEE
Confidence            7899999999999999999999999999988643222   12222221 13468899999999999999887  589999


Q ss_pred             EcccccccCC--CCCCchhhHhhh-----HHHHHHHHHHHHHcC-CCEEEEeccceecCCCCC-----CCCCCCCC----
Q 025786          151 HFAAVAYVGE--STLDPLKYYHNI-----TSNTLVVLESMARHG-VDTLIYSSTCATYGEPEK-----MPITEETP----  213 (248)
Q Consensus       151 ~~Ag~~~~~~--~~~~~~~~~~~~-----~~~~~~ll~~~~~~~-~~~iV~~SS~~~~g~~~~-----~~~~e~~~----  213 (248)
                      |+|+......  ...+++.++..|     +.++.++++++.+.+ .++||++||.++||....     .+++|+.+    
T Consensus        85 h~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~~~E~~~~p~~  164 (353)
T PLN02896         85 HVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFTSSISTLTAKDSNGRWRAVVDETCQTPID  164 (353)
T ss_pred             ECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEEechhhccccccCCCCCCccCcccCCcHH
Confidence            9999754332  223344443333     478899999998764 679999999999974321     34666532    


Q ss_pred             -----CCCCChHHHHHHHHHHHHHHHhhcCCCcEEEEecC
Q 025786          214 -----QAPINPYGKAKKMAEDIILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       214 -----~~~~~~Y~~sK~a~e~l~~~~~~~~gi~~~~v~Pf  248 (248)
                           .++.++|+.||.++|++++.++++++++++++|||
T Consensus       165 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~  204 (353)
T PLN02896        165 HVWNTKASGWVYVLSKLLTEEAAFKYAKENGIDLVSVITT  204 (353)
T ss_pred             HhhccCCCCccHHHHHHHHHHHHHHHHHHcCCeEEEEcCC
Confidence                 12445899999999999999999999999999986

>PRK05876 short chain dehydrogenase; Provisional

Probab=99.94  E-value=6.2e-25  Score=184.80  Aligned_cols=165  Identities=18%  Similarity=0.201  Sum_probs=124.8

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~  144 (248)
                      +|+++||||+||||++++++|+++|++|++++|+..   .+.+..+++...+.++.++.+|++|.+++.+++++     +
T Consensus         6 ~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~---~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   82 (275)
T PRK05876          6 GRGAVITGGASGIGLATGTEFARRGARVVLGDVDKP---GLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLG   82 (275)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHH---HHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            389999999999999999999999999999886533   23333333322344688899999999999888865     5


Q ss_pred             CCCEEEEcccccccCCCCCCchhh----HhhhHHHHH----HHHHHHHHcC-CCEEEEeccceecCCCCCCCCCCCCCCC
Q 025786          145 AFDAVMHFAAVAYVGESTLDPLKY----YHNITSNTL----VVLESMARHG-VDTLIYSSTCATYGEPEKMPITEETPQA  215 (248)
Q Consensus       145 ~iD~li~~Ag~~~~~~~~~~~~~~----~~~~~~~~~----~ll~~~~~~~-~~~iV~~SS~~~~g~~~~~~~~e~~~~~  215 (248)
                      ++|+||||||+.......+.+.+.    ++.|+.++.    .+++.|.+++ .++||++||.+++.           +.+
T Consensus        83 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~-----------~~~  151 (275)
T PRK05876         83 HVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLV-----------PNA  151 (275)
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhcc-----------CCC
Confidence            799999999986544444333333    345555544    4566666665 57999999987762           345


Q ss_pred             CCChHHHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          216 PINPYGKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                      +...|+.||++.+.+++.++.+   .|+++++++|.
T Consensus       152 ~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg  187 (275)
T PRK05876        152 GLGAYGVAKYGVVGLAETLAREVTADGIGVSVLCPM  187 (275)
T ss_pred             CCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeC
Confidence            5789999999999999999877   48999999994

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=99.94  E-value=2e-25  Score=189.89  Aligned_cols=152  Identities=18%  Similarity=0.194  Sum_probs=129.1

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li  150 (248)
                      |+||||||+|+||++++++|+++| +|++++|..                    ..+.+|++|.+.+.+++++.++|+||
T Consensus         1 m~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~--------------------~~~~~Dl~d~~~~~~~~~~~~~D~Vi   59 (299)
T PRK09987          1 MNILLFGKTGQVGWELQRALAPLG-NLIALDVHS--------------------TDYCGDFSNPEGVAETVRKIRPDVIV   59 (299)
T ss_pred             CeEEEECCCCHHHHHHHHHhhccC-CEEEecccc--------------------ccccCCCCCHHHHHHHHHhcCCCEEE
Confidence            479999999999999999999999 788877521                    12458999999999999876789999


Q ss_pred             EcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCCChHHHHHHHHHHH
Q 025786          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDI  230 (248)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e~l  230 (248)
                      |+|+.........+++..+..|..++.++++++.+.+. ++|++||..+|+.....|++|+.+..|.++|+.||.++|++
T Consensus        60 h~Aa~~~~~~~~~~~~~~~~~N~~~~~~l~~aa~~~g~-~~v~~Ss~~Vy~~~~~~p~~E~~~~~P~~~Yg~sK~~~E~~  138 (299)
T PRK09987         60 NAAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEVGA-WVVHYSTDYVFPGTGDIPWQETDATAPLNVYGETKLAGEKA  138 (299)
T ss_pred             ECCccCCcchhhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEccceEECCCCCCCcCCCCCCCCCCHHHHHHHHHHHH
Confidence            99998765555566777788999999999999998874 89999999999877667899999999999999999999999


Q ss_pred             HHHHhhcCCCcEEEEecC
Q 025786          231 ILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       231 ~~~~~~~~gi~~~~v~Pf  248 (248)
                      ++.+..    +.+++||+
T Consensus       139 ~~~~~~----~~~ilR~~  152 (299)
T PRK09987        139 LQEHCA----KHLIFRTS  152 (299)
T ss_pred             HHHhCC----CEEEEecc
Confidence            987654    45888875

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=99.93  E-value=1.7e-25  Score=183.30  Aligned_cols=168  Identities=30%  Similarity=0.515  Sum_probs=143.0

Q ss_pred             EEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEEEc
Q 025786           73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVMHF  152 (248)
Q Consensus        73 vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li~~  152 (248)
                      ||||||+|+||++++++|+++|+.|+.+.|...+.....   ..     .++.++.+|+.|.+.+.++++..++|+|||+
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~---~~-----~~~~~~~~dl~~~~~~~~~~~~~~~d~vi~~   72 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEE---KK-----LNVEFVIGDLTDKEQLEKLLEKANIDVVIHL   72 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHH---HH-----TTEEEEESETTSHHHHHHHHHHHTESEEEEE
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCcccccccccccccccc---cc-----ceEEEEEeeccccccccccccccCceEEEEe
Confidence            799999999999999999999999998776443321111   11     1688999999999999999987778999999


Q ss_pred             ccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHH
Q 025786          153 AAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIIL  232 (248)
Q Consensus       153 Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e~l~~  232 (248)
                      |+............+.+..++.++.++++.+.+.+.+++|++||..+|+.....+++|+.+..|.++|+.+|...|++++
T Consensus        73 a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~sS~~~y~~~~~~~~~e~~~~~~~~~Y~~~K~~~e~~~~  152 (236)
T PF01370_consen   73 AAFSSNPESFEDPEEIIEANVQGTRNLLEAAREAGVKRFIFLSSASVYGDPDGEPIDEDSPINPLSPYGASKRAAEELLR  152 (236)
T ss_dssp             BSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEEGGGGTSSSSSSBETTSGCCHSSHHHHHHHHHHHHHH
T ss_pred             eccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            99753212224667788889999999999999998899999999999998877888999999999999999999999999


Q ss_pred             HHhhcCCCcEEEEecC
Q 025786          233 DFSKNSDMAVLQCHRF  248 (248)
Q Consensus       233 ~~~~~~gi~~~~v~Pf  248 (248)
                      .+.++++++++++||.
T Consensus       153 ~~~~~~~~~~~~~R~~  168 (236)
T PF01370_consen  153 DYAKKYGLRVTILRPP  168 (236)
T ss_dssp             HHHHHHTSEEEEEEES
T ss_pred             cccccccccccccccc
Confidence            9999999999999985

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=99.93  E-value=7.2e-25  Score=190.43  Aligned_cols=175  Identities=27%  Similarity=0.396  Sum_probs=136.0

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCE-EEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYR-VTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~l  149 (248)
                      |+||||||+||||++++++|+++|++ |+.+++..... . .+....+.. ..++.++.+|++|.+++.+++++.++|+|
T Consensus         1 mkilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~-~-~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~~~d~v   77 (352)
T PRK10084          1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAG-N-LESLADVSD-SERYVFEHADICDRAELDRIFAQHQPDAV   77 (352)
T ss_pred             CeEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccc-h-HHHHHhccc-CCceEEEEecCCCHHHHHHHHHhcCCCEE
Confidence            47999999999999999999999986 55455422111 1 111112211 23577899999999999999987679999


Q ss_pred             EEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHc---------CCCEEEEeccceecCCCC----------CCCCCC
Q 025786          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARH---------GVDTLIYSSTCATYGEPE----------KMPITE  210 (248)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~---------~~~~iV~~SS~~~~g~~~----------~~~~~e  210 (248)
                      ||+||..........+++.++.|+.++.++++.+.+.         +.+++|++||..+||...          ..+++|
T Consensus        78 ih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~E  157 (352)
T PRK10084         78 MHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVENSEELPLFTE  157 (352)
T ss_pred             EECCcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCccccccccccCCCccc
Confidence            9999975433333456778999999999999999863         345899999999998531          124678


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHhhcCCCcEEEEecC
Q 025786          211 ETPQAPINPYGKAKKMAEDIILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       211 ~~~~~~~~~Y~~sK~a~e~l~~~~~~~~gi~~~~v~Pf  248 (248)
                      +.+..|.+.|+.||.++|.+++.+++++|++++++||+
T Consensus       158 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~vilr~~  195 (352)
T PRK10084        158 TTAYAPSSPYSASKASSDHLVRAWLRTYGLPTIVTNCS  195 (352)
T ss_pred             cCCCCCCChhHHHHHHHHHHHHHHHHHhCCCEEEEecc
Confidence            88888999999999999999999999999999999974

>PLN02650 dihydroflavonol-4-reductase

Probab=99.93  E-value=1e-24  Score=189.53  Aligned_cols=174  Identities=20%  Similarity=0.247  Sum_probs=131.5

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li  150 (248)
                      |+||||||+||||++++++|+++|++|++++|............ .......++.++.+|++|.+.+.++++  ++|+||
T Consensus         6 k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~v~~Dl~d~~~~~~~~~--~~d~Vi   82 (351)
T PLN02650          6 ETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLL-DLPGATTRLTLWKADLAVEGSFDDAIR--GCTGVF   82 (351)
T ss_pred             CEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHH-hccCCCCceEEEEecCCChhhHHHHHh--CCCEEE
Confidence            78999999999999999999999999999887543322221111 111112357889999999999999887  589999


Q ss_pred             EcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcC-CCEEEEeccceecCCC-CCCC-CCCCCC---------CCCCC
Q 025786          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHG-VDTLIYSSTCATYGEP-EKMP-ITEETP---------QAPIN  218 (248)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~-~~~iV~~SS~~~~g~~-~~~~-~~e~~~---------~~~~~  218 (248)
                      |+|+..... ........++.|+.++.++++++.+.+ .++||++||.++|+.. ...+ ++|+..         ..+.+
T Consensus        83 H~A~~~~~~-~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~  161 (351)
T PLN02650         83 HVATPMDFE-SKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTVNVEEHQKPVYDEDCWSDLDFCRRKKMTGW  161 (351)
T ss_pred             EeCCCCCCC-CCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhcccCCCCCCccCcccCCchhhhhccccccc
Confidence            999864321 112223678889999999999998876 6799999998776543 2223 455431         12446


Q ss_pred             hHHHHHHHHHHHHHHHhhcCCCcEEEEecC
Q 025786          219 PYGKAKKMAEDIILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       219 ~Y~~sK~a~e~l~~~~~~~~gi~~~~v~Pf  248 (248)
                      +|+.||.++|.+++.+++++|++++++||+
T Consensus       162 ~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~  191 (351)
T PLN02650        162 MYFVSKTLAEKAAWKYAAENGLDFISIIPT  191 (351)
T ss_pred             hHHHHHHHHHHHHHHHHHHcCCeEEEECCC
Confidence            899999999999999999999999999996

>PRK07063 short chain dehydrogenase; Provisional

Probab=99.93  E-value=1.5e-24  Score=180.73  Aligned_cols=163  Identities=17%  Similarity=0.155  Sum_probs=122.4

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcC--CCCceEEEEccCCCHHHHHHHhhc-----
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFP--EPGRLQFIYADLGDAKAVNKFFSE-----  143 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~~-----  143 (248)
                      |+++||||+||||++++++|+++|++|++++|+....   .+..+++..  .+.++.++++|++|++++.+++++     
T Consensus         8 k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~---~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   84 (260)
T PRK07063          8 KVALVTGAAQGIGAAIARAFAREGAAVALADLDAALA---ERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAF   84 (260)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHH---HHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            8999999999999999999999999999998754332   222233322  244688899999999999888875     


Q ss_pred             CCCCEEEEcccccccCCCCCCchhhH----hhhHHH----HHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCC
Q 025786          144 NAFDAVMHFAAVAYVGESTLDPLKYY----HNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (248)
Q Consensus       144 ~~iD~li~~Ag~~~~~~~~~~~~~~~----~~~~~~----~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~  215 (248)
                      +++|+||||||........+.+.+.|    +.|+.+    +..+++.|.+++.++||++||...+.           +.+
T Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~  153 (260)
T PRK07063         85 GPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFK-----------IIP  153 (260)
T ss_pred             CCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhcc-----------CCC
Confidence            68999999999754333333333333    344444    34466777766668999999976652           234


Q ss_pred             CCChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          216 PINPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      +..+|+.||++.+.+++.++.+   .||++++|+|
T Consensus       154 ~~~~Y~~sKaa~~~~~~~la~el~~~gIrvn~v~P  188 (260)
T PRK07063        154 GCFPYPVAKHGLLGLTRALGIEYAARNVRVNAIAP  188 (260)
T ss_pred             CchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEee
Confidence            4668999999999999999987   4799999998

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=99.93  E-value=1.4e-24  Score=186.50  Aligned_cols=174  Identities=23%  Similarity=0.253  Sum_probs=132.3

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li  150 (248)
                      ++|+||||+|+||++++++|+++|++|+++.|+....+...+... ......++.++.+|++|.+++.++++  ++|+||
T Consensus         6 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~vi   82 (322)
T PLN02986          6 KLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLA-LDGAKERLKLFKADLLEESSFEQAIE--GCDAVF   82 (322)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHh-ccCCCCceEEEecCCCCcchHHHHHh--CCCEEE
Confidence            899999999999999999999999999988775443222211111 11112468889999999999999887  689999


Q ss_pred             EcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHc-CCCEEEEeccceec--CCC---CCCCCCCCCCCC------CCC
Q 025786          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARH-GVDTLIYSSTCATY--GEP---EKMPITEETPQA------PIN  218 (248)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~-~~~~iV~~SS~~~~--g~~---~~~~~~e~~~~~------~~~  218 (248)
                      |+|+..... ..+...+.++.|+.++.++++.+++. +.++||++||.++|  +..   ...+++|+.+..      +.+
T Consensus        83 h~A~~~~~~-~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~rvV~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~  161 (322)
T PLN02986         83 HTASPVFFT-VKDPQTELIDPALKGTINVLNTCKETPSVKRVILTSSTAAVLFRQPPIEANDVVDETFFSDPSLCRETKN  161 (322)
T ss_pred             EeCCCcCCC-CCCchhhhhHHHHHHHHHHHHHHHhcCCccEEEEecchhheecCCccCCCCCCcCcccCCChHHhhcccc
Confidence            999964321 11122345788999999999999875 57899999998754  332   233466765443      357


Q ss_pred             hHHHHHHHHHHHHHHHhhcCCCcEEEEecC
Q 025786          219 PYGKAKKMAEDIILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       219 ~Y~~sK~a~e~l~~~~~~~~gi~~~~v~Pf  248 (248)
                      .|+.||.++|.+++.+.++++++++++||+
T Consensus       162 ~Y~~sK~~aE~~~~~~~~~~~~~~~~lrp~  191 (322)
T PLN02986        162 WYPLSKILAENAAWEFAKDNGIDMVVLNPG  191 (322)
T ss_pred             chHHHHHHHHHHHHHHHHHhCCeEEEEccc
Confidence            899999999999999999999999999996

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=99.93  E-value=6.6e-25  Score=184.66  Aligned_cols=165  Identities=30%  Similarity=0.495  Sum_probs=129.1

Q ss_pred             EEecCCchhHHHHHHHHHHCC--CEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEEE
Q 025786           74 LVTGGAGYIGSHAALRLLKDS--YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVMH  151 (248)
Q Consensus        74 lITGasg~IG~~la~~L~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li~  151 (248)
                      |||||+||||++|+++|+++|  ++|.++++......  ......    .+...++++|++|++++.++++  ++|+|||
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~--~~~~~~----~~~~~~~~~Di~d~~~l~~a~~--g~d~V~H   72 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKF--LKDLQK----SGVKEYIQGDITDPESLEEALE--GVDVVFH   72 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCceEEEEccccccccc--chhhhc----ccceeEEEeccccHHHHHHHhc--CCceEEE
Confidence            699999999999999999999  78998886543321  111111    1233489999999999999998  7899999


Q ss_pred             cccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCC-CCCCC---CCCCCCCC--CCChHHHHHH
Q 025786          152 FAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGE-PEKMP---ITEETPQA--PINPYGKAKK  225 (248)
Q Consensus       152 ~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~-~~~~~---~~e~~~~~--~~~~Y~~sK~  225 (248)
                      +|+...... ....+..++.|+.+|.+++++|++.+.+++||+||..+++. ....+   .+|+.+.+  +...|+.||+
T Consensus        73 ~Aa~~~~~~-~~~~~~~~~vNV~GT~nvl~aa~~~~VkrlVytSS~~vv~~~~~~~~~~~~dE~~~~~~~~~~~Y~~SK~  151 (280)
T PF01073_consen   73 TAAPVPPWG-DYPPEEYYKVNVDGTRNVLEAARKAGVKRLVYTSSISVVFDNYKGDPIINGDEDTPYPSSPLDPYAESKA  151 (280)
T ss_pred             eCccccccC-cccHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcCcceeEeccCCCCcccCCcCCcccccccCchHHHHH
Confidence            999764432 34567789999999999999999999999999999998875 22222   24555443  5678999999


Q ss_pred             HHHHHHHHHhh---cC--CCcEEEEec
Q 025786          226 MAEDIILDFSK---NS--DMAVLQCHR  247 (248)
Q Consensus       226 a~e~l~~~~~~---~~--gi~~~~v~P  247 (248)
                      .+|+++++...   +.  .+..+++||
T Consensus       152 ~AE~~V~~a~~~~~~~g~~l~t~~lRP  178 (280)
T PF01073_consen  152 LAEKAVLEANGSELKNGGRLRTCALRP  178 (280)
T ss_pred             HHHHHHHhhcccccccccceeEEEEec
Confidence            99999999776   33  489999998

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=99.93  E-value=1.5e-24  Score=186.12  Aligned_cols=173  Identities=24%  Similarity=0.295  Sum_probs=133.1

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li  150 (248)
                      |+||||||+||||++++++|+++|++|++++|.......... +........++.++.+|++|++++.++++  ++|+||
T Consensus         5 ~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~Vi   81 (322)
T PLN02662          5 KVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEH-LLALDGAKERLHLFKANLLEEGSFDSVVD--GCEGVF   81 (322)
T ss_pred             CEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHHH-HHhccCCCCceEEEeccccCcchHHHHHc--CCCEEE
Confidence            789999999999999999999999999998875432211111 11111112468899999999999999887  689999


Q ss_pred             EcccccccCCCCCCc-hhhHhhhHHHHHHHHHHHHHc-CCCEEEEecccee--cCCC---CCCCCCCCCCCCC------C
Q 025786          151 HFAAVAYVGESTLDP-LKYYHNITSNTLVVLESMARH-GVDTLIYSSTCAT--YGEP---EKMPITEETPQAP------I  217 (248)
Q Consensus       151 ~~Ag~~~~~~~~~~~-~~~~~~~~~~~~~ll~~~~~~-~~~~iV~~SS~~~--~g~~---~~~~~~e~~~~~~------~  217 (248)
                      |+|+....  ....+ ...++.|+.++.++++++.+. +.++||++||.++  |+..   ...+++|+.+..|      .
T Consensus        82 h~A~~~~~--~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~v~~SS~~~~~y~~~~~~~~~~~~E~~~~~p~~~~~~~  159 (322)
T PLN02662         82 HTASPFYH--DVTDPQAELIDPAVKGTLNVLRSCAKVPSVKRVVVTSSMAAVAYNGKPLTPDVVVDETWFSDPAFCEESK  159 (322)
T ss_pred             EeCCcccC--CCCChHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEccCHHHhcCCCcCCCCCCcCCcccCCChhHhhccc
Confidence            99996432  22233 367788999999999999887 7789999999763  6432   2235777765544      2


Q ss_pred             ChHHHHHHHHHHHHHHHhhcCCCcEEEEecC
Q 025786          218 NPYGKAKKMAEDIILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~~~~~gi~~~~v~Pf  248 (248)
                      +.|+.||.++|++++.+.++++++++++||+
T Consensus       160 ~~Y~~sK~~~E~~~~~~~~~~~~~~~~lRp~  190 (322)
T PLN02662        160 LWYVLSKTLAEEAAWKFAKENGIDMVTINPA  190 (322)
T ss_pred             chHHHHHHHHHHHHHHHHHHcCCcEEEEeCC
Confidence            5899999999999999999999999999996

>PRK08589 short chain dehydrogenase; Validated

Probab=99.93  E-value=2.5e-24  Score=180.72  Aligned_cols=162  Identities=19%  Similarity=0.227  Sum_probs=122.5

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      |++|||||++|||++++++|+++|++|++++|+    +...+..+++...+.++.++.+|++|.+++.+++++     ++
T Consensus         7 k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~----~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~   82 (272)
T PRK08589          7 KVAVITGASTGIGQASAIALAQEGAYVLAVDIA----EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGR   82 (272)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc----HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCC
Confidence            899999999999999999999999999999874    223333333322345688999999999999888765     67


Q ss_pred             CCEEEEccccccc-CCCCCCchhhHh----hhHHH----HHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYV-GESTLDPLKYYH----NITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (248)
Q Consensus       146 iD~li~~Ag~~~~-~~~~~~~~~~~~----~~~~~----~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~  216 (248)
                      +|+||||||.... ....+.+.+.|+    .|..+    +..+++.|++.+ ++||++||...+.           +.+.
T Consensus        83 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~-----------~~~~  150 (272)
T PRK08589         83 VDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQG-GSIINTSSFSGQA-----------ADLY  150 (272)
T ss_pred             cCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEeCchhhcC-----------CCCC
Confidence            9999999997542 233333334443    34433    345777777665 7999999977652           2334


Q ss_pred             CChHHHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          217 INPYGKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                      ...|+.||++.+.++++++.+   .|+++++++|.
T Consensus       151 ~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~PG  185 (272)
T PRK08589        151 RSGYNAAKGAVINFTKSIAIEYGRDGIRANAIAPG  185 (272)
T ss_pred             CchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecC
Confidence            678999999999999999987   47999999983

>PRK06197 short chain dehydrogenase; Provisional

Probab=99.93  E-value=1.6e-24  Score=184.88  Aligned_cols=177  Identities=13%  Similarity=0.068  Sum_probs=127.9

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~  144 (248)
                      +|+|+||||+||||++++++|+++|++|++++|+..+.+...+.+.... .+.++.++.+|++|.+++++++++     +
T Consensus        16 ~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~   94 (306)
T PRK06197         16 GRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAAT-PGADVTLQELDLTSLASVRAAADALRAAYP   94 (306)
T ss_pred             CCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhC-CCCceEEEECCCCCHHHHHHHHHHHHhhCC
Confidence            3899999999999999999999999999999875433322222222211 134688899999999999888765     5


Q ss_pred             CCCEEEEcccccccCC--CCCCchhhHhhhHHH----HHHHHHHHHHcCCCEEEEeccceecC--CCCCCCCCCCCCCCC
Q 025786          145 AFDAVMHFAAVAYVGE--STLDPLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYG--EPEKMPITEETPQAP  216 (248)
Q Consensus       145 ~iD~li~~Ag~~~~~~--~~~~~~~~~~~~~~~----~~~ll~~~~~~~~~~iV~~SS~~~~g--~~~~~~~~e~~~~~~  216 (248)
                      ++|+||||||......  ..+..+..++.|..+    +..+++.|++.+.++||++||.+.+.  ........+..+..+
T Consensus        95 ~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~~~~~~  174 (306)
T PRK06197         95 RIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGGHRIRAAIHFDDLQWERRYNR  174 (306)
T ss_pred             CCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCHHHhccCCCCccccCcccCCCc
Confidence            7999999999754322  223345567777777    66688888877678999999987542  222222222334556


Q ss_pred             CChHHHHHHHHHHHHHHHhhcC---CCcEEEE--ec
Q 025786          217 INPYGKAKKMAEDIILDFSKNS---DMAVLQC--HR  247 (248)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~~~~~---gi~~~~v--~P  247 (248)
                      ..+|+.||++.+.+++.++.++   |++++++  +|
T Consensus       175 ~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~P  210 (306)
T PRK06197        175 VAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHP  210 (306)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCC
Confidence            7899999999999999999874   6666554  56

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=99.93  E-value=4.6e-24  Score=189.78  Aligned_cols=166  Identities=28%  Similarity=0.449  Sum_probs=131.9

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li  150 (248)
                      |+|+||||+||||++++++|+++|++|++++|.......   ....... ..++.++..|+.+..     +.  ++|+||
T Consensus       121 mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~---~~~~~~~-~~~~~~~~~Di~~~~-----~~--~~D~Vi  189 (436)
T PLN02166        121 LRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKE---NLVHLFG-NPRFELIRHDVVEPI-----LL--EVDQIY  189 (436)
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHh---Hhhhhcc-CCceEEEECcccccc-----cc--CCCEEE
Confidence            789999999999999999999999999999875322111   1111111 235778889987642     22  689999


Q ss_pred             EcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCC-----CCCCCChHHHHHH
Q 025786          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEET-----PQAPINPYGKAKK  225 (248)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~-----~~~~~~~Y~~sK~  225 (248)
                      |+|+.........++.+.++.|+.++.+++++|++.+. ++|++||..+||.....+++|+.     +..+.+.|+.||.
T Consensus       190 HlAa~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~g~-r~V~~SS~~VYg~~~~~p~~E~~~~~~~p~~p~s~Yg~SK~  268 (436)
T PLN02166        190 HLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKR  268 (436)
T ss_pred             ECceeccchhhccCHHHHHHHHHHHHHHHHHHHHHhCC-EEEEECcHHHhCCCCCCCCCccccccCCCCCCCCchHHHHH
Confidence            99997654334456778899999999999999998874 89999999999976666677763     5566788999999


Q ss_pred             HHHHHHHHHhhcCCCcEEEEecC
Q 025786          226 MAEDIILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       226 a~e~l~~~~~~~~gi~~~~v~Pf  248 (248)
                      ++|++++.++++++++++++|||
T Consensus       269 ~aE~~~~~y~~~~~l~~~ilR~~  291 (436)
T PLN02166        269 TAETLAMDYHRGAGVEVRIARIF  291 (436)
T ss_pred             HHHHHHHHHHHHhCCCeEEEEEc
Confidence            99999999999899999999986

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.93  E-value=1.7e-24  Score=179.72  Aligned_cols=161  Identities=14%  Similarity=0.151  Sum_probs=120.8

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      |+++||||++|||++++++|+++|++|++++|..  .+...+.++.   .+.++.++.+|++|++++++++++     ++
T Consensus         9 k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~--~~~~~~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~   83 (251)
T PRK12481          9 KVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAE--APETQAQVEA---LGRKFHFITADLIQQKDIDSIVSQAVEVMGH   83 (251)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEecCch--HHHHHHHHHH---cCCeEEEEEeCCCCHHHHHHHHHHHHHHcCC
Confidence            8999999999999999999999999999987632  1222222222   245688899999999999988875     68


Q ss_pred             CCEEEEcccccccCCCCCCchh----hHhhhHHH----HHHHHHHHHHcC-CCEEEEeccceecCCCCCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYVGESTLDPLK----YYHNITSN----TLVVLESMARHG-VDTLIYSSTCATYGEPEKMPITEETPQAP  216 (248)
Q Consensus       146 iD~li~~Ag~~~~~~~~~~~~~----~~~~~~~~----~~~ll~~~~~~~-~~~iV~~SS~~~~g~~~~~~~~e~~~~~~  216 (248)
                      +|+||||||........+.+.+    .++.|..+    +..+++.|.+++ .++||++||...+.           +...
T Consensus        84 iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~-----------~~~~  152 (251)
T PRK12481         84 IDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQ-----------GGIR  152 (251)
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcC-----------CCCC
Confidence            9999999998654433332233    34455444    344666676654 47999999987763           2233


Q ss_pred             CChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          217 INPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      ...|+.||++.+.+++.++.+   +|+++++++|
T Consensus       153 ~~~Y~asK~a~~~l~~~la~e~~~~girvn~v~P  186 (251)
T PRK12481        153 VPSYTASKSAVMGLTRALATELSQYNINVNAIAP  186 (251)
T ss_pred             CcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEec
Confidence            568999999999999999987   5899999998

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=99.93  E-value=1e-24  Score=203.63  Aligned_cols=169  Identities=23%  Similarity=0.350  Sum_probs=136.2

Q ss_pred             CceEEEEecCCchhHHHHHHHHHHC-CCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHH-HHHHhhcCCC
Q 025786           69 GVTHVLVTGGAGYIGSHAALRLLKD-SYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKA-VNKFFSENAF  146 (248)
Q Consensus        69 ~~k~vlITGasg~IG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~-~~~~~~~~~i  146 (248)
                      .+|+|||||||||||++++++|+++ |++|++++|.....   .    .... ..+++++.+|++|.++ ++++++  ++
T Consensus       314 ~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~---~----~~~~-~~~~~~~~gDl~d~~~~l~~~l~--~~  383 (660)
T PRK08125        314 RRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAI---S----RFLG-HPRFHFVEGDISIHSEWIEYHIK--KC  383 (660)
T ss_pred             cCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhh---h----hhcC-CCceEEEeccccCcHHHHHHHhc--CC
Confidence            3489999999999999999999986 79999998743211   1    1111 2368889999998655 566665  68


Q ss_pred             CEEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCC-------CCCCh
Q 025786          147 DAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQ-------APINP  219 (248)
Q Consensus       147 D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~-------~~~~~  219 (248)
                      |+|||+||...+......+.+.++.|..++.++++++.+.+ +++||+||..+||.....+++|+.+.       .|.+.
T Consensus       384 D~ViHlAa~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~~-~~~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~s~  462 (660)
T PRK08125        384 DVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRYCVKYN-KRIIFPSTSEVYGMCTDKYFDEDTSNLIVGPINKQRWI  462 (660)
T ss_pred             CEEEECccccCchhhccCHHHHHHhhHHHHHHHHHHHHhcC-CeEEEEcchhhcCCCCCCCcCccccccccCCCCCCccc
Confidence            99999999765444445667788899999999999999887 79999999999987655667787642       24568


Q ss_pred             HHHHHHHHHHHHHHHhhcCCCcEEEEecC
Q 025786          220 YGKAKKMAEDIILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       220 Y~~sK~a~e~l~~~~~~~~gi~~~~v~Pf  248 (248)
                      |+.||.++|.+++.+++++|++++++|||
T Consensus       463 Yg~sK~~~E~~~~~~~~~~g~~~~ilR~~  491 (660)
T PRK08125        463 YSVSKQLLDRVIWAYGEKEGLRFTLFRPF  491 (660)
T ss_pred             hHHHHHHHHHHHHHHHHhcCCceEEEEEc
Confidence            99999999999999999999999999996

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=99.93  E-value=2.4e-24  Score=184.60  Aligned_cols=173  Identities=46%  Similarity=0.778  Sum_probs=141.1

Q ss_pred             EEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEEE
Q 025786           72 HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVMH  151 (248)
Q Consensus        72 ~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li~  151 (248)
                      +||||||+|+||++++++|+++|++|+++++..+.....   ...... ..++..+.+|+++.+++.++++..++|+|||
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~---~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~d~vv~   76 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEA---LKRGER-ITRVTFVEGDLRDRELLDRLFEEHKIDAVIH   76 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhh---hhhhcc-ccceEEEECCCCCHHHHHHHHHhCCCcEEEE
Confidence            489999999999999999999999999887543322111   111111 1257788999999999999998778999999


Q ss_pred             cccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCCChHHHHHHHHHHHH
Q 025786          152 FAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDII  231 (248)
Q Consensus       152 ~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e~l~  231 (248)
                      |||..........+.+.+..|+.++.++++.+.+.+.+++|++||..+|+.....+++|+.+..+.+.|+.+|.++|.++
T Consensus        77 ~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~ss~~~~g~~~~~~~~e~~~~~~~~~y~~sK~~~e~~~  156 (328)
T TIGR01179        77 FAGLIAVGESVQDPLKYYRNNVVNTLNLLEAMQQTGVKKFIFSSSAAVYGEPSSIPISEDSPLGPINPYGRSKLMSERIL  156 (328)
T ss_pred             CccccCcchhhcCchhhhhhhHHHHHHHHHHHHhcCCCEEEEecchhhcCCCCCCCccccCCCCCCCchHHHHHHHHHHH
Confidence            99976444444456677888999999999999888878999999999998766667889888888999999999999999


Q ss_pred             HHHhhc-CCCcEEEEecC
Q 025786          232 LDFSKN-SDMAVLQCHRF  248 (248)
Q Consensus       232 ~~~~~~-~gi~~~~v~Pf  248 (248)
                      +.++++ .+++++++||+
T Consensus       157 ~~~~~~~~~~~~~ilR~~  174 (328)
T TIGR01179       157 RDLSKADPGLSYVILRYF  174 (328)
T ss_pred             HHHHHhccCCCEEEEecC
Confidence            999887 79999999985

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=99.93  E-value=2.8e-24  Score=184.68  Aligned_cols=176  Identities=20%  Similarity=0.197  Sum_probs=125.8

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~  144 (248)
                      +|+++||||+||||++++++|+++|++|++++|+..+   ..+..+++.....++.++.+|++|.+++++++++     +
T Consensus         6 ~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~---~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   82 (322)
T PRK07453          6 KGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKK---AEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGK   82 (322)
T ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHH---HHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCC
Confidence            4899999999999999999999999999999875432   2223333322234688899999999999888875     4


Q ss_pred             CCCEEEEcccccccCC-----CCCCchhhHhhhHHHHHH----HHHHHHHcCC--CEEEEeccceecCCCC-C---CC--
Q 025786          145 AFDAVMHFAAVAYVGE-----STLDPLKYYHNITSNTLV----VLESMARHGV--DTLIYSSTCATYGEPE-K---MP--  207 (248)
Q Consensus       145 ~iD~li~~Ag~~~~~~-----~~~~~~~~~~~~~~~~~~----ll~~~~~~~~--~~iV~~SS~~~~g~~~-~---~~--  207 (248)
                      ++|+||||||+.....     ..+..+..+..|..++..    +++.|++.+.  ++||++||...+.... +   .+  
T Consensus        83 ~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~~~~~~~~~  162 (322)
T PRK07453         83 PLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGGKIPIPAP  162 (322)
T ss_pred             CccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCccccCCccCCCCc
Confidence            6999999999754311     112334456677766544    5666665543  5999999977653110 0   00  


Q ss_pred             ------------------CCCCCCCCCCChHHHHHHHHHHHHHHHhhcC----CCcEEEEecC
Q 025786          208 ------------------ITEETPQAPINPYGKAKKMAEDIILDFSKNS----DMAVLQCHRF  248 (248)
Q Consensus       208 ------------------~~e~~~~~~~~~Y~~sK~a~e~l~~~~~~~~----gi~~~~v~Pf  248 (248)
                                        ..+..+..+..+|+.||.+.+.+++.+++++    |++++++||.
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG  225 (322)
T PRK07453        163 ADLGDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPG  225 (322)
T ss_pred             cchhhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCC
Confidence                              0012345667899999999999999998875    7999999994

>PRK05993 short chain dehydrogenase; Provisional

Probab=99.93  E-value=2.2e-24  Score=181.51  Aligned_cols=158  Identities=19%  Similarity=0.230  Sum_probs=123.3

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc------
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE------  143 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~------  143 (248)
                      +|+++||||+||||++++++|+++|++|++++|+...   +. .+.+     ..+.++.+|++|.+++++++++      
T Consensus         4 ~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~---~~-~l~~-----~~~~~~~~Dl~d~~~~~~~~~~~~~~~~   74 (277)
T PRK05993          4 KRSILITGCSSGIGAYCARALQSDGWRVFATCRKEED---VA-ALEA-----EGLEAFQLDYAEPESIAALVAQVLELSG   74 (277)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHH---HH-HHHH-----CCceEEEccCCCHHHHHHHHHHHHHHcC
Confidence            3799999999999999999999999999999875322   11 1111     2467889999999998887764      


Q ss_pred             CCCCEEEEcccccccCCCCCCch----hhHhhhHHH----HHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCC
Q 025786          144 NAFDAVMHFAAVAYVGESTLDPL----KYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (248)
Q Consensus       144 ~~iD~li~~Ag~~~~~~~~~~~~----~~~~~~~~~----~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~  215 (248)
                      +++|+||||||........+.+.    ..++.|+.+    +..+++.|++.+.++||++||..++           .+.+
T Consensus        75 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~~-----------~~~~  143 (277)
T PRK05993         75 GRLDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILGL-----------VPMK  143 (277)
T ss_pred             CCccEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhhc-----------CCCC
Confidence            47999999999865544333332    345566655    5678889988888899999997665           2344


Q ss_pred             CCChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          216 PINPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      +...|+.||++.+.+++.++.+   +|+++++++|
T Consensus       144 ~~~~Y~asK~a~~~~~~~l~~el~~~gi~v~~v~P  178 (277)
T PRK05993        144 YRGAYNASKFAIEGLSLTLRMELQGSGIHVSLIEP  178 (277)
T ss_pred             ccchHHHHHHHHHHHHHHHHHHhhhhCCEEEEEec
Confidence            5779999999999999999865   6899999998

>PRK06139 short chain dehydrogenase; Provisional

Probab=99.93  E-value=4.4e-24  Score=183.84  Aligned_cols=164  Identities=16%  Similarity=0.177  Sum_probs=125.6

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      |+++|||||||||++++++|+++|++|++++|+...   +.+..+++...+.++.++.+|++|.+++++++++     ++
T Consensus         8 k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~---l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   84 (330)
T PRK06139          8 AVVVITGASSGIGQATAEAFARRGARLVLAARDEEA---LQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGGR   84 (330)
T ss_pred             CEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHH---HHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence            899999999999999999999999999999875433   3333333322345788899999999999988864     68


Q ss_pred             CCEEEEcccccccCCCCCCchh----hHhhhHHH----HHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYVGESTLDPLK----YYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (248)
Q Consensus       146 iD~li~~Ag~~~~~~~~~~~~~----~~~~~~~~----~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (248)
                      +|++|||||+.......+.+.+    .++.|+.+    +..+++.|++++.++||++||...+.           +.+..
T Consensus        85 iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~~-----------~~p~~  153 (330)
T PRK06139         85 IDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFA-----------AQPYA  153 (330)
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhcC-----------CCCCc
Confidence            9999999998655444444433    34455544    34477788877778999999977652           33446


Q ss_pred             ChHHHHHHHHHHHHHHHhhc----CCCcEEEEecC
Q 025786          218 NPYGKAKKMAEDIILDFSKN----SDMAVLQCHRF  248 (248)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~~~~----~gi~~~~v~Pf  248 (248)
                      ..|+.||++...++++++.|    .|++++.++|.
T Consensus       154 ~~Y~asKaal~~~~~sL~~El~~~~gI~V~~v~Pg  188 (330)
T PRK06139        154 AAYSASKFGLRGFSEALRGELADHPDIHVCDVYPA  188 (330)
T ss_pred             hhHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEecC
Confidence            78999999999999999877    27999999983

>PRK07478 short chain dehydrogenase; Provisional

Probab=99.93  E-value=4.7e-24  Score=177.14  Aligned_cols=164  Identities=15%  Similarity=0.116  Sum_probs=123.6

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      |+++||||+||||++++++|+++|++|++++|+..+.+   +..+++...+.++.++.+|++|++++++++++     ++
T Consensus         7 k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~---~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   83 (254)
T PRK07478          7 KVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELD---QLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFGG   83 (254)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH---HHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence            89999999999999999999999999999987543322   22233322245688899999999999888875     58


Q ss_pred             CCEEEEccccccc-CCCCCC----chhhHhhhHHH----HHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYV-GESTLD----PLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (248)
Q Consensus       146 iD~li~~Ag~~~~-~~~~~~----~~~~~~~~~~~----~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~  216 (248)
                      +|+||||||.... .+..+.    .+..++.|+.+    ++.+++.|++.+.++||++||...+.          .+.++
T Consensus        84 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~~~----------~~~~~  153 (254)
T PRK07478         84 LDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVGHT----------AGFPG  153 (254)
T ss_pred             CCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHhhc----------cCCCC
Confidence            9999999997532 222222    23334555544    34467788777778999999976652          12344


Q ss_pred             CChHHHHHHHHHHHHHHHhhcC---CCcEEEEec
Q 025786          217 INPYGKAKKMAEDIILDFSKNS---DMAVLQCHR  247 (248)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~~~~~---gi~~~~v~P  247 (248)
                      ...|+.||++.+.+++.++.++   |+++++|+|
T Consensus       154 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~P  187 (254)
T PRK07478        154 MAAYAASKAGLIGLTQVLAAEYGAQGIRVNALLP  187 (254)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHhhcCEEEEEEee
Confidence            6789999999999999999884   799999998

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.92  E-value=5e-24  Score=177.41  Aligned_cols=162  Identities=16%  Similarity=0.198  Sum_probs=122.5

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      |++|||||+|+||++++++|+++|++|++++|. ++.+.+.+.+.+   .+.++.++++|+++.+++.+++++     ++
T Consensus        16 k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~   91 (258)
T PRK06935         16 KVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEK---EGRKVTFVQVDLTKPESAEKVVKEALEEFGK   91 (258)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHh---cCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            899999999999999999999999999999875 222223222222   235688999999999999888875     57


Q ss_pred             CCEEEEcccccccCCCCCCchhhH----hhhHHH----HHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYVGESTLDPLKYY----HNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (248)
Q Consensus       146 iD~li~~Ag~~~~~~~~~~~~~~~----~~~~~~----~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (248)
                      +|++|||||.....+..+.+.+.|    +.|+.+    ++.+++.|.+.+.++||++||...+.           +.+..
T Consensus        92 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~~  160 (258)
T PRK06935         92 IDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQ-----------GGKFV  160 (258)
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhcc-----------CCCCc
Confidence            999999999764433333333333    344444    44466777777778999999977652           22345


Q ss_pred             ChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          218 NPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      ..|+.||++.+.+++.++++   .|+++++++|
T Consensus       161 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~i~P  193 (258)
T PRK06935        161 PAYTASKHGVAGLTKAFANELAAYNIQVNAIAP  193 (258)
T ss_pred             hhhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEe
Confidence            68999999999999999987   4799999998

>PRK06398 aldose dehydrogenase; Validated

Probab=99.92  E-value=5.9e-24  Score=177.18  Aligned_cols=152  Identities=13%  Similarity=0.151  Sum_probs=119.6

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      |+++||||++|||++++++|+++|++|++++|+...              ..++.++++|++|++++++++++     ++
T Consensus         7 k~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~--------------~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   72 (258)
T PRK06398          7 KVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPS--------------YNDVDYFKVDVSNKEQVIKGIDYVISKYGR   72 (258)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCccc--------------cCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            899999999999999999999999999999864321              12577899999999999888875     57


Q ss_pred             CCEEEEcccccccCCCCCCchhh----HhhhHHHHH----HHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYVGESTLDPLKY----YHNITSNTL----VVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (248)
Q Consensus       146 iD~li~~Ag~~~~~~~~~~~~~~----~~~~~~~~~----~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (248)
                      +|+||||||.....+..+.+.+.    ++.|..++.    .+++.|.+.+.++||++||...+.           +.++.
T Consensus        73 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~~  141 (258)
T PRK06398         73 IDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFA-----------VTRNA  141 (258)
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhcc-----------CCCCC
Confidence            99999999986544443333333    345555543    356667666678999999977652           34557


Q ss_pred             ChHHHHHHHHHHHHHHHhhcC--CCcEEEEec
Q 025786          218 NPYGKAKKMAEDIILDFSKNS--DMAVLQCHR  247 (248)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~~~~~--gi~~~~v~P  247 (248)
                      ..|+.||++.+.+++.++.++  ++++++++|
T Consensus       142 ~~Y~~sKaal~~~~~~la~e~~~~i~vn~i~P  173 (258)
T PRK06398        142 AAYVTSKHAVLGLTRSIAVDYAPTIRCVAVCP  173 (258)
T ss_pred             chhhhhHHHHHHHHHHHHHHhCCCCEEEEEec
Confidence            899999999999999999885  389999988

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=99.92  E-value=4.8e-24  Score=181.99  Aligned_cols=174  Identities=30%  Similarity=0.466  Sum_probs=138.0

Q ss_pred             EEEEecCCchhHHHHHHHHHHCC--CEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 025786           72 HVLVTGGAGYIGSHAALRLLKDS--YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (248)
Q Consensus        72 ~vlITGasg~IG~~la~~L~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~l  149 (248)
                      +|+||||||+||++++++|+++|  ++|++++|......  .+..+.... ..++.++.+|++|++++.++++..++|+|
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~--~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~d~v   77 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGN--LENLADLED-NPRYRFVKGDIGDRELVSRLFTEHQPDAV   77 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchh--hhhhhhhcc-CCCcEEEEcCCcCHHHHHHHHhhcCCCEE
Confidence            48999999999999999999987  78988875321111  111122211 23678899999999999999986569999


Q ss_pred             EEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCC-CEEEEeccceecCCCCCC-CCCCCCCCCCCChHHHHHHHH
Q 025786          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV-DTLIYSSTCATYGEPEKM-PITEETPQAPINPYGKAKKMA  227 (248)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~-~~iV~~SS~~~~g~~~~~-~~~e~~~~~~~~~Y~~sK~a~  227 (248)
                      ||+|+..........++..++.|..++.++++.+.+... .++|++||..+||..... +++|..+..|.+.|+.+|.++
T Consensus        78 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~v~g~~~~~~~~~e~~~~~~~~~Y~~sK~~~  157 (317)
T TIGR01181        78 VHFAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEFRFHHISTDEVYGDLEKGDAFTETTPLAPSSPYSASKAAS  157 (317)
T ss_pred             EEcccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEeeccceeCCCCCCCCcCCCCCCCCCCchHHHHHHH
Confidence            999997654344445667788899999999999988643 389999999999865433 688888888889999999999


Q ss_pred             HHHHHHHhhcCCCcEEEEecC
Q 025786          228 EDIILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       228 e~l~~~~~~~~gi~~~~v~Pf  248 (248)
                      |.+++.++.+.+++++++||.
T Consensus       158 e~~~~~~~~~~~~~~~i~R~~  178 (317)
T TIGR01181       158 DHLVRAYHRTYGLPALITRCS  178 (317)
T ss_pred             HHHHHHHHHHhCCCeEEEEec
Confidence            999999999999999999984

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.92  E-value=2.6e-24  Score=182.34  Aligned_cols=176  Identities=18%  Similarity=0.155  Sum_probs=136.4

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      ++++||||++|||.++|++|+.+|++|++.+|+....+++.+.+.. .....++.++++|++|.+++.++.++     .+
T Consensus        36 ~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~-~~~~~~i~~~~lDLssl~SV~~fa~~~~~~~~~  114 (314)
T KOG1208|consen   36 KVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQK-GKANQKIRVIQLDLSSLKSVRKFAEEFKKKEGP  114 (314)
T ss_pred             cEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHh-cCCCCceEEEECCCCCHHHHHHHHHHHHhcCCC
Confidence            8999999999999999999999999999999876555555555444 12355788899999999999988876     68


Q ss_pred             CCEEEEcccccccCC--CCCCchhhHhhhHHH----HHHHHHHHHHcCCCEEEEeccceecCCCCCCCCC-CCCC-CCCC
Q 025786          146 FDAVMHFAAVAYVGE--STLDPLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPIT-EETP-QAPI  217 (248)
Q Consensus       146 iD~li~~Ag~~~~~~--~~~~~~~~~~~~~~~----~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~-e~~~-~~~~  217 (248)
                      +|++|||||++....  ..+..+..+..|..+    +..++|.++++...|||++||.......+-..+. |... ....
T Consensus       115 ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~~~~~~~~~l~~~~~~~~~~~  194 (314)
T KOG1208|consen  115 LDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILGGGKIDLKDLSGEKAKLYSSD  194 (314)
T ss_pred             ccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccccCccchhhccchhccCccch
Confidence            999999999976544  334567778888777    5668888888777899999997761111111222 2222 3344


Q ss_pred             ChHHHHHHHHHHHHHHHhhcC--CCcEEEEec
Q 025786          218 NPYGKAKKMAEDIILDFSKNS--DMAVLQCHR  247 (248)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~~~~~--gi~~~~v~P  247 (248)
                      ..|+.||.+...++.++++++  |+.++.+||
T Consensus       195 ~~Y~~SKla~~l~~~eL~k~l~~~V~~~~~hP  226 (314)
T KOG1208|consen  195 AAYALSKLANVLLANELAKRLKKGVTTYSVHP  226 (314)
T ss_pred             hHHHHhHHHHHHHHHHHHHHhhcCceEEEECC
Confidence            469999999999999999885  699999998

>PRK07062 short chain dehydrogenase; Provisional

Probab=99.92  E-value=5.5e-24  Score=177.81  Aligned_cols=166  Identities=17%  Similarity=0.132  Sum_probs=123.8

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      |+++||||++|||++++++|+++|++|++++|+..+.+...+.+.+.. .+.++.++.+|++|.+++.+++++     ++
T Consensus         9 k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   87 (265)
T PRK07062          9 RVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKF-PGARLLAARCDVLDEADVAAFAAAVEARFGG   87 (265)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhC-CCceEEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence            899999999999999999999999999999975433332222222211 123678899999999999888765     67


Q ss_pred             CCEEEEcccccccCCCCCCchhhHh----hhHHH----HHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYVGESTLDPLKYYH----NITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (248)
Q Consensus       146 iD~li~~Ag~~~~~~~~~~~~~~~~----~~~~~----~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (248)
                      +|+||||||........+.+.+.|.    .|+.+    ++.+++.|++.+.++||++||...+.           +.+..
T Consensus        88 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~~  156 (265)
T PRK07062         88 VDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLALQ-----------PEPHM  156 (265)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEeccccccC-----------CCCCc
Confidence            9999999997544333333333333    33332    45577888777778999999977652           23346


Q ss_pred             ChHHHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          218 NPYGKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                      ..|+.+|++.+.+++.++.+   .|++++.++|.
T Consensus       157 ~~y~asKaal~~~~~~la~e~~~~gi~v~~i~PG  190 (265)
T PRK07062        157 VATSAARAGLLNLVKSLATELAPKGVRVNSILLG  190 (265)
T ss_pred             hHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecC
Confidence            78999999999999999887   58999999983

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=99.92  E-value=6.1e-24  Score=176.99  Aligned_cols=161  Identities=22%  Similarity=0.163  Sum_probs=120.5

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      |+++||||+||||++++++|+++|++|++++|+..    ..+..+++...+.++.++.+|++|.+++.+++++     ++
T Consensus         9 k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~----~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   84 (260)
T PRK12823          9 KVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSEL----VHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAFGR   84 (260)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchH----HHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcCC
Confidence            89999999999999999999999999999987431    1222223322245678899999999998887765     57


Q ss_pred             CCEEEEcccccc-cCCCCCCc----hhhHhhhHHH----HHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAY-VGESTLDP----LKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (248)
Q Consensus       146 iD~li~~Ag~~~-~~~~~~~~----~~~~~~~~~~----~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~  216 (248)
                      +|+||||||... ..+..+..    +..++.|+.+    +..+++.|.+.+.++||++||...++.             +
T Consensus        85 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~-------------~  151 (260)
T PRK12823         85 IDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATRGI-------------N  151 (260)
T ss_pred             CeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCccccCC-------------C
Confidence            999999998642 12222222    2233444444    345778887777789999999876531             2


Q ss_pred             CChHHHHHHHHHHHHHHHhhcC---CCcEEEEecC
Q 025786          217 INPYGKAKKMAEDIILDFSKNS---DMAVLQCHRF  248 (248)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~~~~~---gi~~~~v~Pf  248 (248)
                      ..+|+.||++.+.+++.++.++   |+++++++|.
T Consensus       152 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg  186 (260)
T PRK12823        152 RVPYSAAKGGVNALTASLAFEYAEHGIRVNAVAPG  186 (260)
T ss_pred             CCccHHHHHHHHHHHHHHHHHhcccCcEEEEEecC
Confidence            4579999999999999999885   8999999984

>PRK07791 short chain dehydrogenase; Provisional

Probab=99.92  E-value=6.5e-24  Score=179.54  Aligned_cols=166  Identities=17%  Similarity=0.112  Sum_probs=122.4

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCC------CcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSR------GNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-  143 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~------~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-  143 (248)
                      |+++||||++|||++++++|+++|++|+++++..+      ..+.+.+..+++...+.++.++.+|++|.+++.+++++ 
T Consensus         7 k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~   86 (286)
T PRK07791          7 RVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLVDAA   86 (286)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHH
Confidence            89999999999999999999999999999886431      11333333344433345688899999999999888765 


Q ss_pred             ----CCCCEEEEcccccccCCCCCCch----hhHhhhHHHH----HHHHHHHHHcC------CCEEEEeccceecCCCCC
Q 025786          144 ----NAFDAVMHFAAVAYVGESTLDPL----KYYHNITSNT----LVVLESMARHG------VDTLIYSSTCATYGEPEK  205 (248)
Q Consensus       144 ----~~iD~li~~Ag~~~~~~~~~~~~----~~~~~~~~~~----~~ll~~~~~~~------~~~iV~~SS~~~~g~~~~  205 (248)
                          +++|+||||||+.......+...    ..++.|+.++    +.+++.|.+..      .++||++||.+.+.    
T Consensus        87 ~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~----  162 (286)
T PRK07791         87 VETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGLQ----  162 (286)
T ss_pred             HHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhhCc----
Confidence                68999999999865433333222    3344555553    34566665432      26899999976642    


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          206 MPITEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       206 ~~~~e~~~~~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                             +.+....|+.||++.+.+++.++.+   +|++++.|+|
T Consensus       163 -------~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~P  200 (286)
T PRK07791        163 -------GSVGQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAP  200 (286)
T ss_pred             -------CCCCchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECC
Confidence                   2334678999999999999999988   6899999998

>PRK06114 short chain dehydrogenase; Provisional

Probab=99.92  E-value=8.2e-24  Score=175.81  Aligned_cols=166  Identities=13%  Similarity=0.099  Sum_probs=122.4

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      |+++||||++|||++++++|+++|++|++++|+...  ...+..+++...+.++.++++|++|++++.+++++     ++
T Consensus         9 k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~--~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~   86 (254)
T PRK06114          9 QVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDD--GLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELGA   86 (254)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcch--HHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            899999999999999999999999999999875322  12222233322245678899999999999888765     67


Q ss_pred             CCEEEEcccccccCCCCCCchh----hHhhhHHHH----HHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYVGESTLDPLK----YYHNITSNT----LVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (248)
Q Consensus       146 iD~li~~Ag~~~~~~~~~~~~~----~~~~~~~~~----~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (248)
                      +|+||||||........+.+.+    .++.|+.+.    +.+++.|.+.+.++||++||.+.+...         +..+.
T Consensus        87 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~---------~~~~~  157 (254)
T PRK06114         87 LTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGIIVN---------RGLLQ  157 (254)
T ss_pred             CCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhcCCC---------CCCCc
Confidence            9999999998654333333333    344555544    345666766667899999997664211         11125


Q ss_pred             ChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          218 NPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      ..|+.||++.+.+++.++.+   +|+++++++|
T Consensus       158 ~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~P  190 (254)
T PRK06114        158 AHYNASKAGVIHLSKSLAMEWVGRGIRVNSISP  190 (254)
T ss_pred             chHHHHHHHHHHHHHHHHHHHhhcCeEEEEEee
Confidence            68999999999999999986   5899999998

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=99.92  E-value=6.5e-24  Score=177.21  Aligned_cols=170  Identities=19%  Similarity=0.180  Sum_probs=127.6

Q ss_pred             CCCceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc---
Q 025786           67 EEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE---  143 (248)
Q Consensus        67 ~~~~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~---  143 (248)
                      ..+ |+++||||++|||+++|++|++.|++|++++|+.+..++..+.+......+.++..+.+|+++.++++++++.   
T Consensus         6 l~g-kvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~   84 (270)
T KOG0725|consen    6 LAG-KVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVE   84 (270)
T ss_pred             CCC-cEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHH
Confidence            344 9999999999999999999999999999999765544343333333322345789999999999888777764   


Q ss_pred             ---CCCCEEEEcccccccC-CCCCCchhhHhhhHHH---------HHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCC
Q 025786          144 ---NAFDAVMHFAAVAYVG-ESTLDPLKYYHNITSN---------TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITE  210 (248)
Q Consensus       144 ---~~iD~li~~Ag~~~~~-~~~~~~~~~~~~~~~~---------~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e  210 (248)
                         +++|++|||||..... ...+.+++.|+..+..         +..+.+.+.+.+.+.|+++||.+.+.         
T Consensus        85 ~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~---------  155 (270)
T KOG0725|consen   85 KFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVG---------  155 (270)
T ss_pred             HhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEecccccc---------
Confidence               6899999999987544 3455555555544433         22245555666778999999977653         


Q ss_pred             CCCCCCC-ChHHHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          211 ETPQAPI-NPYGKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       211 ~~~~~~~-~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                        +..+. .+|+.||.+.+++++.++.|   +|+++++|.|.
T Consensus       156 --~~~~~~~~Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG  195 (270)
T KOG0725|consen  156 --PGPGSGVAYGVSKAALLQLTRSLAKELAKHGIRVNSVSPG  195 (270)
T ss_pred             --CCCCCcccchhHHHHHHHHHHHHHHHHhhcCcEEEEeecC
Confidence              11122 68999999999999999988   68999999983

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.92  E-value=3.4e-24  Score=178.74  Aligned_cols=164  Identities=12%  Similarity=0.103  Sum_probs=118.7

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcC-CCCceEEEEccCCCHHHHHHHhhc-----C
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFP-EPGRLQFIYADLGDAKAVNKFFSE-----N  144 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~-----~  144 (248)
                      |+++||||++|||++++++|+++|++|++++|.  +.+...+..+++.. .+.++.++++|++|++++++++++     +
T Consensus         9 k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   86 (260)
T PRK08416          9 KTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNS--NVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDEDFD   86 (260)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCC--CHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence            899999999999999999999999999988652  22222222222211 134788999999999999988875     5


Q ss_pred             CCCEEEEccccccc------CCCCCCchhhHh----hhHHH----HHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCC
Q 025786          145 AFDAVMHFAAVAYV------GESTLDPLKYYH----NITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITE  210 (248)
Q Consensus       145 ~iD~li~~Ag~~~~------~~~~~~~~~~~~----~~~~~----~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e  210 (248)
                      ++|+||||||....      .+..+...+.+.    .|..+    ++.+++.|.+.+.++||++||...+          
T Consensus        87 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~----------  156 (260)
T PRK08416         87 RVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNL----------  156 (260)
T ss_pred             CccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEeccccc----------
Confidence            79999999986421      111122222232    23222    4456777776666799999996543          


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHhhcC---CCcEEEEec
Q 025786          211 ETPQAPINPYGKAKKMAEDIILDFSKNS---DMAVLQCHR  247 (248)
Q Consensus       211 ~~~~~~~~~Y~~sK~a~e~l~~~~~~~~---gi~~~~v~P  247 (248)
                       .+.+....|+.||++++.+++.++.++   |+++++|+|
T Consensus       157 -~~~~~~~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~P  195 (260)
T PRK08416        157 -VYIENYAGHGTSKAAVETMVKYAATELGEKNIRVNAVSG  195 (260)
T ss_pred             -cCCCCcccchhhHHHHHHHHHHHHHHhhhhCeEEEEEee
Confidence             123346689999999999999999984   899999998

>PRK06194 hypothetical protein; Provisional

Probab=99.92  E-value=7.6e-24  Score=178.93  Aligned_cols=164  Identities=13%  Similarity=0.073  Sum_probs=121.3

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~  144 (248)
                      ++++|||||+||||++++++|+++|++|++++|....   +.+..+++...+.++.++.+|++|.++++++++.     +
T Consensus         6 ~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~---~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g   82 (287)
T PRK06194          6 GKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDA---LDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFG   82 (287)
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHH---HHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            3899999999999999999999999999999875332   2222233322244688899999999999888865     5


Q ss_pred             CCCEEEEcccccccCCCCCCchh----hHhhhHHHHH----HHHHHHHHcCC------CEEEEeccceecCCCCCCCCCC
Q 025786          145 AFDAVMHFAAVAYVGESTLDPLK----YYHNITSNTL----VVLESMARHGV------DTLIYSSTCATYGEPEKMPITE  210 (248)
Q Consensus       145 ~iD~li~~Ag~~~~~~~~~~~~~----~~~~~~~~~~----~ll~~~~~~~~------~~iV~~SS~~~~g~~~~~~~~e  210 (248)
                      ++|+||||||........+.+.+    .++.|+.++.    .+++.|.+.+.      ++||++||.+.+.         
T Consensus        83 ~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~---------  153 (287)
T PRK06194         83 AVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLL---------  153 (287)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhcc---------
Confidence            79999999998655443333333    3455555544    46666776643      6899999987763         


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHhhcC-----CCcEEEEec
Q 025786          211 ETPQAPINPYGKAKKMAEDIILDFSKNS-----DMAVLQCHR  247 (248)
Q Consensus       211 ~~~~~~~~~Y~~sK~a~e~l~~~~~~~~-----gi~~~~v~P  247 (248)
                        +.++..+|+.||++.+.+++.++.++     +++++.+.|
T Consensus       154 --~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~p  193 (287)
T PRK06194        154 --APPAMGIYNVSKHAVVSLTETLYQDLSLVTDQVGASVLCP  193 (287)
T ss_pred             --CCCCCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEe
Confidence              22346789999999999999998874     377777776

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=99.92  E-value=1.2e-23  Score=183.93  Aligned_cols=167  Identities=22%  Similarity=0.262  Sum_probs=132.4

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li  150 (248)
                      |+|+||||+|+||+++++.|.++|++|++++|.....  .    ..   ......++.+|++|.+.+..+++  ++|+||
T Consensus        22 ~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~--~----~~---~~~~~~~~~~Dl~d~~~~~~~~~--~~D~Vi   90 (370)
T PLN02695         22 LRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEH--M----SE---DMFCHEFHLVDLRVMENCLKVTK--GVDHVF   90 (370)
T ss_pred             CEEEEECCccHHHHHHHHHHHhCCCEEEEEEeccccc--c----cc---ccccceEEECCCCCHHHHHHHHh--CCCEEE
Confidence            8999999999999999999999999999998743211  0    00   01124678899999998888776  689999


Q ss_pred             EcccccccCC-CCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCCC----CCCCCCC--CCCCCChHHHH
Q 025786          151 HFAAVAYVGE-STLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEK----MPITEET--PQAPINPYGKA  223 (248)
Q Consensus       151 ~~Ag~~~~~~-~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~----~~~~e~~--~~~~~~~Y~~s  223 (248)
                      |+|+...... ....+...+..|..++.++++++++.+.++||++||..+||....    .++.|+.  +..|.+.|+.+
T Consensus        91 h~Aa~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~~vk~~V~~SS~~vYg~~~~~~~~~~~~E~~~~p~~p~s~Yg~s  170 (370)
T PLN02695         91 NLAADMGGMGFIQSNHSVIMYNNTMISFNMLEAARINGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLE  170 (370)
T ss_pred             EcccccCCccccccCchhhHHHHHHHHHHHHHHHHHhCCCEEEEeCchhhcCCccccCcCCCcCcccCCCCCCCCHHHHH
Confidence            9998643211 222344556788889999999999888889999999999985432    2355654  66788999999


Q ss_pred             HHHHHHHHHHHhhcCCCcEEEEecC
Q 025786          224 KKMAEDIILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       224 K~a~e~l~~~~~~~~gi~~~~v~Pf  248 (248)
                      |.++|++++.++.++|++++++||+
T Consensus       171 K~~~E~~~~~~~~~~g~~~~ilR~~  195 (370)
T PLN02695        171 KLATEELCKHYTKDFGIECRIGRFH  195 (370)
T ss_pred             HHHHHHHHHHHHHHhCCCEEEEEEC
Confidence            9999999999999899999999996

>PRK07024 short chain dehydrogenase; Provisional

Probab=99.92  E-value=1.3e-23  Score=174.97  Aligned_cols=163  Identities=15%  Similarity=0.109  Sum_probs=121.6

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      |+++||||+||||++++++|+++|++|++++|+..   ...+..+++.. ..++.++.+|++|.+++.+++++     +.
T Consensus         3 ~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~---~~~~~~~~~~~-~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~   78 (257)
T PRK07024          3 LKVFITGASSGIGQALAREYARQGATLGLVARRTD---ALQAFAARLPK-AARVSVYAADVRDADALAAAAADFIAAHGL   78 (257)
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHH---HHHHHHHhccc-CCeeEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            79999999999999999999999999999987532   22222222322 22788999999999999887764     56


Q ss_pred             CCEEEEcccccccCCCC-----CCchhhHhhhHHHHHH----HHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYVGEST-----LDPLKYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (248)
Q Consensus       146 iD~li~~Ag~~~~~~~~-----~~~~~~~~~~~~~~~~----ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~  216 (248)
                      +|+||||||........     +..+..++.|+.++..    +++.|.+.+.++||++||.+.+.           +.+.
T Consensus        79 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~~~-----------~~~~  147 (257)
T PRK07024         79 PDVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAGVR-----------GLPG  147 (257)
T ss_pred             CCEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhhcC-----------CCCC
Confidence            99999999975432211     1223345555555444    66678777778999999976642           2334


Q ss_pred             CChHHHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          217 INPYGKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                      ...|+.||++.+.++++++.+   +|+++++++|.
T Consensus       148 ~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg  182 (257)
T PRK07024        148 AGAYSASKAAAIKYLESLRVELRPAGVRVVTIAPG  182 (257)
T ss_pred             CcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecC
Confidence            668999999999999999855   68999999983

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=99.92  E-value=1.3e-23  Score=174.64  Aligned_cols=164  Identities=16%  Similarity=0.147  Sum_probs=122.8

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      |+++||||+|+||++++++|+++|++|++++|+..+.   .+..+.+...+.++.++++|++|.+++++++++     ++
T Consensus        11 k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~---~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   87 (255)
T PRK07523         11 RRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKL---AAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIGP   87 (255)
T ss_pred             CEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHH---HHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence            8999999999999999999999999999998754322   222233322234688899999999999988875     57


Q ss_pred             CCEEEEcccccccCCCCCCchhhH----hhhHHHHHH----HHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYVGESTLDPLKYY----HNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (248)
Q Consensus       146 iD~li~~Ag~~~~~~~~~~~~~~~----~~~~~~~~~----ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (248)
                      +|+||||||.....+..+.+.+.+    ..|..+...    +.+.|.+.+.++||++||....           .+.++.
T Consensus        88 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~-----------~~~~~~  156 (255)
T PRK07523         88 IDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSA-----------LARPGI  156 (255)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhc-----------cCCCCC
Confidence            999999999865444433343333    355555444    4445555567899999996553           233457


Q ss_pred             ChHHHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          218 NPYGKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                      ..|+.+|.+.+.+++.++.+   +|+++++++|.
T Consensus       157 ~~y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg  190 (255)
T PRK07523        157 APYTATKGAVGNLTKGMATDWAKHGLQCNAIAPG  190 (255)
T ss_pred             ccHHHHHHHHHHHHHHHHHHhhHhCeEEEEEEEC
Confidence            78999999999999999975   68999999984

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.92  E-value=9.5e-24  Score=175.90  Aligned_cols=162  Identities=14%  Similarity=0.060  Sum_probs=118.2

Q ss_pred             eEEEEecCC--chhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----
Q 025786           71 THVLVTGGA--GYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (248)
Q Consensus        71 k~vlITGas--g~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----  143 (248)
                      |+++||||+  +|||++++++|+++|++|++++|+.+..+.+.+..++..  ..++.++++|++|++++++++++     
T Consensus         8 k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   85 (257)
T PRK08594          8 KTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLE--GQESLLLPCDVTSDEEITACFETIKEEV   85 (257)
T ss_pred             CEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcC--CCceEEEecCCCCHHHHHHHHHHHHHhC
Confidence            899999997  899999999999999999998875443333333333331  34688899999999999888865     


Q ss_pred             CCCCEEEEccccccc----CCCCCCchhhHh----hhHHH----HHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCC
Q 025786          144 NAFDAVMHFAAVAYV----GESTLDPLKYYH----NITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEE  211 (248)
Q Consensus       144 ~~iD~li~~Ag~~~~----~~~~~~~~~~~~----~~~~~----~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~  211 (248)
                      +++|++|||||+...    .+..+.+.+.|.    .|..+    ++.+++.|.+  .++||++||....           
T Consensus        86 g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~g~Iv~isS~~~~-----------  152 (257)
T PRK08594         86 GVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTE--GGSIVTLTYLGGE-----------  152 (257)
T ss_pred             CCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhccc--CceEEEEcccCCc-----------
Confidence            789999999997532    122222233333    33333    2345666643  3799999997653           


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          212 TPQAPINPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       212 ~~~~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      .+.+...+|++||++.+.++++++.+   +||+++.|+|
T Consensus       153 ~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~P  191 (257)
T PRK08594        153 RVVQNYNVMGVAKASLEASVKYLANDLGKDGIRVNAISA  191 (257)
T ss_pred             cCCCCCchhHHHHHHHHHHHHHHHHHhhhcCCEEeeeec
Confidence            23344678999999999999999987   4799999998

>PRK07825 short chain dehydrogenase; Provisional

Probab=99.92  E-value=7.9e-24  Score=177.66  Aligned_cols=160  Identities=21%  Similarity=0.134  Sum_probs=121.8

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      ++++|||||||||++++++|+++|++|++++|+..   .+.+..+++    .++.++.+|++|++++.+++++     ++
T Consensus         6 ~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~---~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   78 (273)
T PRK07825          6 KVVAITGGARGIGLATARALAALGARVAIGDLDEA---LAKETAAEL----GLVVGGPLDVTDPASFAAFLDAVEADLGP   78 (273)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHH---HHHHHHHHh----ccceEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            89999999999999999999999999999886432   222222222    1477899999999998877765     67


Q ss_pred             CCEEEEcccccccCCCCCCchh----hHhhhHHH----HHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYVGESTLDPLK----YYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (248)
Q Consensus       146 iD~li~~Ag~~~~~~~~~~~~~----~~~~~~~~----~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (248)
                      +|++|||||+.......+.+.+    .++.|..+    +..+++.|.+.+.++||++||.+.+.           +.++.
T Consensus        79 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~~  147 (273)
T PRK07825         79 IDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKI-----------PVPGM  147 (273)
T ss_pred             CCEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccccC-----------CCCCC
Confidence            9999999998654443333333    33444444    34477888888888999999977652           33457


Q ss_pred             ChHHHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          218 NPYGKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                      ..|+.||++.+.+++.++.+   .|+++++++|.
T Consensus       148 ~~Y~asKaa~~~~~~~l~~el~~~gi~v~~v~Pg  181 (273)
T PRK07825        148 ATYCASKHAVVGFTDAARLELRGTGVHVSVVLPS  181 (273)
T ss_pred             cchHHHHHHHHHHHHHHHHHhhccCcEEEEEeCC
Confidence            78999999999999998877   58999999983

>PRK06196 oxidoreductase; Provisional

Probab=99.92  E-value=7.6e-24  Score=181.50  Aligned_cols=171  Identities=15%  Similarity=0.113  Sum_probs=124.8

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      |+|+||||+||||++++++|+++|++|++++|+..+   ..+..+++    .++.++++|++|.+++++++++     ++
T Consensus        27 k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~---~~~~~~~l----~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~   99 (315)
T PRK06196         27 KTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDV---AREALAGI----DGVEVVMLDLADLESVRAFAERFLDSGRR   99 (315)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHH---HHHHHHHh----hhCeEEEccCCCHHHHHHHHHHHHhcCCC
Confidence            899999999999999999999999999999875332   22222222    1377899999999999888864     57


Q ss_pred             CCEEEEcccccccCC--CCCCchhhHhhhHHH----HHHHHHHHHHcCCCEEEEeccceecCC-CCCCCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYVGE--STLDPLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGE-PEKMPITEETPQAPIN  218 (248)
Q Consensus       146 iD~li~~Ag~~~~~~--~~~~~~~~~~~~~~~----~~~ll~~~~~~~~~~iV~~SS~~~~g~-~~~~~~~e~~~~~~~~  218 (248)
                      +|+||||||+.....  ..+..+..+..|..+    +..+++.|.+.+.++||++||.+.... ..........+..+..
T Consensus       100 iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~~~~~~~  179 (315)
T PRK06196        100 IDILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGHRRSPIRWDDPHFTRGYDKWL  179 (315)
T ss_pred             CCEEEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHhccCCCCccccCccCCCChHH
Confidence            999999999754321  122334456666666    455777777776679999999765321 1111111123445667


Q ss_pred             hHHHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          219 PYGKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       219 ~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                      .|+.||++.+.+++.++.+   .|+++++++|.
T Consensus       180 ~Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG  212 (315)
T PRK06196        180 AYGQSKTANALFAVHLDKLGKDQGVRAFSVHPG  212 (315)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCC
Confidence            8999999999999999876   58999999994

>PLN02206 UDP-glucuronate decarboxylase

Probab=99.92  E-value=1.9e-23  Score=186.07  Aligned_cols=166  Identities=28%  Similarity=0.445  Sum_probs=130.4

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li  150 (248)
                      |+||||||+||||++++++|+++|++|++++|......   +....... ..++.++.+|+.+..     +.  ++|+||
T Consensus       120 ~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~---~~~~~~~~-~~~~~~i~~D~~~~~-----l~--~~D~Vi  188 (442)
T PLN02206        120 LRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRK---ENVMHHFS-NPNFELIRHDVVEPI-----LL--EVDQIY  188 (442)
T ss_pred             CEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccch---hhhhhhcc-CCceEEEECCccChh-----hc--CCCEEE
Confidence            78999999999999999999999999999886432211   11111111 235788889987652     22  589999


Q ss_pred             EcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCC-----CCCCCChHHHHHH
Q 025786          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEET-----PQAPINPYGKAKK  225 (248)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~-----~~~~~~~Y~~sK~  225 (248)
                      |+|+...+.....++.+.++.|+.++.++++++++.+. ++|++||..+||.....+.+|+.     |..+.+.|+.||.
T Consensus       189 HlAa~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~g~-r~V~~SS~~VYg~~~~~p~~E~~~~~~~P~~~~s~Y~~SK~  267 (442)
T PLN02206        189 HLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKR  267 (442)
T ss_pred             EeeeecchhhhhcCHHHHHHHHHHHHHHHHHHHHHhCC-EEEEECChHHhCCCCCCCCCccccccCCCCCccchHHHHHH
Confidence            99997654334456778889999999999999998875 89999999999876555666653     4445688999999


Q ss_pred             HHHHHHHHHhhcCCCcEEEEecC
Q 025786          226 MAEDIILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       226 a~e~l~~~~~~~~gi~~~~v~Pf  248 (248)
                      ++|.++..+.++++++++++|||
T Consensus       268 ~aE~~~~~y~~~~g~~~~ilR~~  290 (442)
T PLN02206        268 TAETLTMDYHRGANVEVRIARIF  290 (442)
T ss_pred             HHHHHHHHHHHHhCCCeEEEEec
Confidence            99999999988899999999986

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=99.92  E-value=7.3e-24  Score=182.27  Aligned_cols=157  Identities=22%  Similarity=0.340  Sum_probs=125.2

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCC--CEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDS--YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~  148 (248)
                      |+||||||+||||++++++|+++|  ++|++++|.....   .+..+.. . ..++.++.+|++|.+++.++++  ++|+
T Consensus         5 k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~---~~~~~~~-~-~~~~~~v~~Dl~d~~~l~~~~~--~iD~   77 (324)
T TIGR03589         5 KSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQ---WEMQQKF-P-APCLRFFIGDVRDKERLTRALR--GVDY   77 (324)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHH---HHHHHHh-C-CCcEEEEEccCCCHHHHHHHHh--cCCE
Confidence            899999999999999999999986  7899888643221   1111111 1 2468889999999999999887  5899


Q ss_pred             EEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCCChHHHHHHHHH
Q 025786          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAE  228 (248)
Q Consensus       149 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e  228 (248)
                      |||+||.........++.+.++.|+.++.++++++.+.+.++||++||...              ..|.++|+.||+++|
T Consensus        78 Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~~~~~iV~~SS~~~--------------~~p~~~Y~~sK~~~E  143 (324)
T TIGR03589        78 VVHAAALKQVPAAEYNPFECIRTNINGAQNVIDAAIDNGVKRVVALSTDKA--------------ANPINLYGATKLASD  143 (324)
T ss_pred             EEECcccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeCCCC--------------CCCCCHHHHHHHHHH
Confidence            999999754333344567788999999999999999888889999999432              334678999999999


Q ss_pred             HHHHHHhh---cCCCcEEEEecC
Q 025786          229 DIILDFSK---NSDMAVLQCHRF  248 (248)
Q Consensus       229 ~l~~~~~~---~~gi~~~~v~Pf  248 (248)
                      .+++.++.   ++|++++++||+
T Consensus       144 ~l~~~~~~~~~~~gi~~~~lR~g  166 (324)
T TIGR03589       144 KLFVAANNISGSKGTRFSVVRYG  166 (324)
T ss_pred             HHHHHHHhhccccCcEEEEEeec
Confidence            99988653   579999999996

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PRK07109 short chain dehydrogenase; Provisional

Probab=99.92  E-value=9.7e-24  Score=182.17  Aligned_cols=164  Identities=18%  Similarity=0.191  Sum_probs=124.6

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~  144 (248)
                      +++++||||+||||++++++|+++|++|++++|+...   +.+..+++...+.++.++.+|++|.+++++++++     +
T Consensus         8 ~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~---l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g   84 (334)
T PRK07109          8 RQVVVITGASAGVGRATARAFARRGAKVVLLARGEEG---LEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELG   84 (334)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHH---HHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCC
Confidence            3899999999999999999999999999999875432   2222333322345788899999999999888764     6


Q ss_pred             CCCEEEEcccccccCCCCCCchhhH----hhhHHH----HHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCC
Q 025786          145 AFDAVMHFAAVAYVGESTLDPLKYY----HNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (248)
Q Consensus       145 ~iD~li~~Ag~~~~~~~~~~~~~~~----~~~~~~----~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~  216 (248)
                      ++|++|||||........+.+.+.+    +.|+.+    +..+++.|.+++.++||++||...+.           +.+.
T Consensus        85 ~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~~~-----------~~~~  153 (334)
T PRK07109         85 PIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYR-----------SIPL  153 (334)
T ss_pred             CCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhhcc-----------CCCc
Confidence            8999999999764443333333333    333333    55688888887778999999988773           2334


Q ss_pred             CChHHHHHHHHHHHHHHHhhc-----CCCcEEEEec
Q 025786          217 INPYGKAKKMAEDIILDFSKN-----SDMAVLQCHR  247 (248)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~~~~-----~gi~~~~v~P  247 (248)
                      ...|+.||++.+.++++++.|     .++++++|+|
T Consensus       154 ~~~Y~asK~a~~~~~~~l~~el~~~~~~I~v~~v~P  189 (334)
T PRK07109        154 QSAYCAAKHAIRGFTDSLRCELLHDGSPVSVTMVQP  189 (334)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEeC
Confidence            678999999999999999876     3699999998

>PRK06180 short chain dehydrogenase; Provisional

Probab=99.92  E-value=8e-24  Score=178.12  Aligned_cols=162  Identities=17%  Similarity=0.159  Sum_probs=123.0

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~  144 (248)
                      +++++||||+||||++++++|+++|++|++++|+..+   .... ...  ...++.++.+|++|.+++.+++++     +
T Consensus         4 ~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~---~~~l-~~~--~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~   77 (277)
T PRK06180          4 MKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAA---RADF-EAL--HPDRALARLLDVTDFDAIDAVVADAEATFG   77 (277)
T ss_pred             CCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHH---HHHH-Hhh--cCCCeeEEEccCCCHHHHHHHHHHHHHHhC
Confidence            3789999999999999999999999999999875322   1111 111  134678899999999999888775     5


Q ss_pred             CCCEEEEcccccccCCCCCCch----hhHhhhHHHHHHHHH----HHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCC
Q 025786          145 AFDAVMHFAAVAYVGESTLDPL----KYYHNITSNTLVVLE----SMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (248)
Q Consensus       145 ~iD~li~~Ag~~~~~~~~~~~~----~~~~~~~~~~~~ll~----~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~  216 (248)
                      ++|+||||||........+.+.    ..++.|..++.++++    .+++.+.++||++||.+.+.           +.++
T Consensus        78 ~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~-----------~~~~  146 (277)
T PRK06180         78 PIDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLI-----------TMPG  146 (277)
T ss_pred             CCCEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccC-----------CCCC
Confidence            7999999999865444333333    335667766655444    45566667999999977652           2345


Q ss_pred             CChHHHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          217 INPYGKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                      ..+|+.||++++.+++.++.+   +|+++++++|.
T Consensus       147 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg  181 (277)
T PRK06180        147 IGYYCGSKFALEGISESLAKEVAPFGIHVTAVEPG  181 (277)
T ss_pred             cchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEecC
Confidence            789999999999999999877   58999999994

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.92  E-value=1.3e-23  Score=173.82  Aligned_cols=163  Identities=18%  Similarity=0.207  Sum_probs=120.5

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEE-ecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIV-DNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~  144 (248)
                      ++++||||+|+||++++++|+++|++|+++ +|...   ...+..+++...+.++.++.+|++|++++.+++++     +
T Consensus         5 ~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (250)
T PRK08063          5 KVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRK---AAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFG   81 (250)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHH---HHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            899999999999999999999999998874 44322   22222223322345788899999999999988875     5


Q ss_pred             CCCEEEEcccccccCCCCCCchhh----HhhhHHHHHH----HHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCC
Q 025786          145 AFDAVMHFAAVAYVGESTLDPLKY----YHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (248)
Q Consensus       145 ~iD~li~~Ag~~~~~~~~~~~~~~----~~~~~~~~~~----ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~  216 (248)
                      ++|+||||||.....+..+.+.+.    +..|..++..    +++.+.+++.++||++||...+.           +.++
T Consensus        82 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~-----------~~~~  150 (250)
T PRK08063         82 RLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIR-----------YLEN  150 (250)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcc-----------CCCC
Confidence            799999999976544433333333    3355554444    55566666678999999976542           3345


Q ss_pred             CChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          217 INPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      ...|+.||++.+.++++++.+   .|+++++++|
T Consensus       151 ~~~y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~p  184 (250)
T PRK08063        151 YTTVGVSKAALEALTRYLAVELAPKGIAVNAVSG  184 (250)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHhHhCeEEEeEec
Confidence            678999999999999999876   6899999998

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.92  E-value=1.8e-23  Score=173.84  Aligned_cols=159  Identities=18%  Similarity=0.146  Sum_probs=120.3

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      |+++||||+||||++++++|+++|++|+++++..   +...+.++.     .++.++.+|++|++++++++++     ++
T Consensus         8 k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~---~~~~~~l~~-----~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   79 (255)
T PRK06463          8 KVALITGGTRGIGRAIAEAFLREGAKVAVLYNSA---ENEAKELRE-----KGVFTIKCDVGNRDQVKKSKEVVEKEFGR   79 (255)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCc---HHHHHHHHh-----CCCeEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            8999999999999999999999999999876532   111222221     1477899999999999988875     57


Q ss_pred             CCEEEEcccccccCCCCCCc----hhhHhhhHHH----HHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYVGESTLDP----LKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (248)
Q Consensus       146 iD~li~~Ag~~~~~~~~~~~----~~~~~~~~~~----~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (248)
                      +|+||||||.....+....+    +..++.|+.+    ++.+++.|.+.+.++||++||...++.          +.++.
T Consensus        80 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~----------~~~~~  149 (255)
T PRK06463         80 VDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAGIGT----------AAEGT  149 (255)
T ss_pred             CCEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHhCCC----------CCCCc
Confidence            99999999985433322222    2334556555    455778887776789999999877631          12345


Q ss_pred             ChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          218 NPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      ..|+.||++.+.++++++.+   .|+++++++|
T Consensus       150 ~~Y~asKaa~~~~~~~la~e~~~~~i~v~~i~P  182 (255)
T PRK06463        150 TFYAITKAGIIILTRRLAFELGKYGIRVNAVAP  182 (255)
T ss_pred             cHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEee
Confidence            68999999999999999987   5899999998

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.92  E-value=9.3e-24  Score=197.75  Aligned_cols=175  Identities=27%  Similarity=0.467  Sum_probs=138.9

Q ss_pred             eEEEEecCCchhHHHHHHHHHHC--CCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKD--SYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~  148 (248)
                      |+|||||||||||++++++|+++  |++|+++++.... ...... ... ....++.++.+|++|.+.+..++...++|+
T Consensus         7 ~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~-~~~~~l-~~~-~~~~~v~~~~~Dl~d~~~~~~~~~~~~~D~   83 (668)
T PLN02260          7 KNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYC-SNLKNL-NPS-KSSPNFKFVKGDIASADLVNYLLITEGIDT   83 (668)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCcc-chhhhh-hhc-ccCCCeEEEECCCCChHHHHHHHhhcCCCE
Confidence            89999999999999999999998  6899988863211 111111 111 112468899999999998888776557999


Q ss_pred             EEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcC-CCEEEEeccceecCCCCCCC---CCCCCCCCCCChHHHHH
Q 025786          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHG-VDTLIYSSTCATYGEPEKMP---ITEETPQAPINPYGKAK  224 (248)
Q Consensus       149 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~-~~~iV~~SS~~~~g~~~~~~---~~e~~~~~~~~~Y~~sK  224 (248)
                      |||+|+..........+.+.++.|+.++.++++++++.+ .+++|++||..+||.....+   ..|+.+..|.++|+.||
T Consensus        84 ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS~~vyg~~~~~~~~~~~E~~~~~p~~~Y~~sK  163 (668)
T PLN02260         84 IMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDADVGNHEASQLLPTNPYSATK  163 (668)
T ss_pred             EEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcchHHhCCCccccccCccccCCCCCCCCcHHHH
Confidence            999999765433334556778899999999999999876 68999999999998654432   35667777889999999


Q ss_pred             HHHHHHHHHHhhcCCCcEEEEecC
Q 025786          225 KMAEDIILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       225 ~a~e~l~~~~~~~~gi~~~~v~Pf  248 (248)
                      .++|.+++.+.++++++++++||+
T Consensus       164 ~~aE~~v~~~~~~~~l~~vilR~~  187 (668)
T PLN02260        164 AGAEMLVMAYGRSYGLPVITTRGN  187 (668)
T ss_pred             HHHHHHHHHHHHHcCCCEEEECcc
Confidence            999999999999899999999986

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.92  E-value=8.5e-24  Score=177.75  Aligned_cols=160  Identities=14%  Similarity=0.045  Sum_probs=116.0

Q ss_pred             eEEEEecCC--chhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----
Q 025786           71 THVLVTGGA--GYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (248)
Q Consensus        71 k~vlITGas--g~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----  143 (248)
                      |+++||||+  +|||+++++.|+++|++|++++|+.+..+...+..++.   +.. .++++|++|.+++++++++     
T Consensus         6 k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~---~~~-~~~~~Dv~d~~~v~~~~~~i~~~~   81 (274)
T PRK08415          6 KKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQEL---GSD-YVYELDVSKPEHFKSLAESLKKDL   81 (274)
T ss_pred             cEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhc---CCc-eEEEecCCCHHHHHHHHHHHHHHc
Confidence            899999997  79999999999999999999987532112222222222   223 5789999999999888865     


Q ss_pred             CCCCEEEEccccccc----CCCCCCchh----hHhhhHHH----HHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCC
Q 025786          144 NAFDAVMHFAAVAYV----GESTLDPLK----YYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEE  211 (248)
Q Consensus       144 ~~iD~li~~Ag~~~~----~~~~~~~~~----~~~~~~~~----~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~  211 (248)
                      +++|+||||||+...    .+..+.+.+    .++.|+.+    ++.++|.|.+  .++||++||.+..           
T Consensus        82 g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~--~g~Iv~isS~~~~-----------  148 (274)
T PRK08415         82 GKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLND--GASVLTLSYLGGV-----------  148 (274)
T ss_pred             CCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhcc--CCcEEEEecCCCc-----------
Confidence            689999999997532    222222333    33444444    4446677754  3689999996543           


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          212 TPQAPINPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       212 ~~~~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      .+.+....|+.||++.+.+++.++.+   +|+++++|.|
T Consensus       149 ~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~P  187 (274)
T PRK08415        149 KYVPHYNVMGVAKAALESSVRYLAVDLGKKGIRVNAISA  187 (274)
T ss_pred             cCCCcchhhhhHHHHHHHHHHHHHHHhhhcCeEEEEEec
Confidence            12334678999999999999999987   5799999998

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.92  E-value=8.6e-24  Score=177.46  Aligned_cols=160  Identities=14%  Similarity=0.088  Sum_probs=114.9

Q ss_pred             eEEEEecCCc--hhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----
Q 025786           71 THVLVTGGAG--YIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (248)
Q Consensus        71 k~vlITGasg--~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----  143 (248)
                      |++|||||++  |||+++|++|+++|++|++++|+.+..+...+..++.    +...++++|++|.+++++++++     
T Consensus         8 k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~----g~~~~~~~Dv~d~~~v~~~~~~~~~~~   83 (271)
T PRK06505          8 KRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESL----GSDFVLPCDVEDIASVDAVFEALEKKW   83 (271)
T ss_pred             CEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhc----CCceEEeCCCCCHHHHHHHHHHHHHHh
Confidence            8999999997  9999999999999999999886432211222221211    2235689999999999888876     


Q ss_pred             CCCCEEEEccccccc----CCCCCCchhhHh----hhHHH----HHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCC
Q 025786          144 NAFDAVMHFAAVAYV----GESTLDPLKYYH----NITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEE  211 (248)
Q Consensus       144 ~~iD~li~~Ag~~~~----~~~~~~~~~~~~----~~~~~----~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~  211 (248)
                      +++|+||||||+...    .+..+.+.+.|+    .|..+    ++.+++.|.+  .++||++||.+..           
T Consensus        84 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~--~G~Iv~isS~~~~-----------  150 (271)
T PRK06505         84 GKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPD--GGSMLTLTYGGST-----------  150 (271)
T ss_pred             CCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhcc--CceEEEEcCCCcc-----------
Confidence            689999999997532    122223333343    33333    3345666653  3799999997553           


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          212 TPQAPINPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       212 ~~~~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      .+.+.+.+|++||++.+.|++.++.+   +||++++|.|
T Consensus       151 ~~~~~~~~Y~asKaAl~~l~r~la~el~~~gIrVn~v~P  189 (271)
T PRK06505        151 RVMPNYNVMGVAKAALEASVRYLAADYGPQGIRVNAISA  189 (271)
T ss_pred             ccCCccchhhhhHHHHHHHHHHHHHHHhhcCeEEEEEec
Confidence            12344678999999999999999988   5799999998

>PRK06482 short chain dehydrogenase; Provisional

Probab=99.92  E-value=2.2e-23  Score=175.25  Aligned_cols=161  Identities=16%  Similarity=0.132  Sum_probs=122.4

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      |++|||||+||||++++++|+++|++|++++|+..   ...+..+..   +.++.++++|++|.+++.+++++     ++
T Consensus         3 k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~---~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   76 (276)
T PRK06482          3 KTWFITGASSGFGRGMTERLLARGDRVAATVRRPD---ALDDLKARY---GDRLWVLQLDVTDSAAVRAVVDRAFAALGR   76 (276)
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHH---HHHHHHHhc---cCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            78999999999999999999999999999886432   222211111   34688899999999999887764     57


Q ss_pred             CCEEEEcccccccCCCCCC----chhhHhhhHHHHHHHHHH----HHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYVGESTLD----PLKYYHNITSNTLVVLES----MARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (248)
Q Consensus       146 iD~li~~Ag~~~~~~~~~~----~~~~~~~~~~~~~~ll~~----~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (248)
                      +|+||||||........+.    .+..++.|+.++.++++.    |++.+.++||++||.....           +.++.
T Consensus        77 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~-----------~~~~~  145 (276)
T PRK06482         77 IDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQI-----------AYPGF  145 (276)
T ss_pred             CCEEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCccccc-----------CCCCC
Confidence            9999999998654433322    233455677776665555    4666678999999966541           33457


Q ss_pred             ChHHHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          218 NPYGKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                      +.|+.||++.+.++++++.+   +|+++++++|.
T Consensus       146 ~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~v~pg  179 (276)
T PRK06482        146 SLYHATKWGIEGFVEAVAQEVAPFGIEFTIVEPG  179 (276)
T ss_pred             chhHHHHHHHHHHHHHHHHHhhccCcEEEEEeCC
Confidence            89999999999999999877   69999999994

>PRK08278 short chain dehydrogenase; Provisional

Probab=99.92  E-value=2.7e-23  Score=174.58  Aligned_cols=168  Identities=17%  Similarity=0.169  Sum_probs=122.8

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcch----hhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc---
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIG----AVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE---  143 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~----~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~---  143 (248)
                      |+++||||+||||++++++|+++|++|++++|+......    +.+..+++...+.++.++++|+++.+++.+++++   
T Consensus         7 k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~   86 (273)
T PRK08278          7 KTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVAKAVE   86 (273)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHH
Confidence            899999999999999999999999999999986543211    1112222222345788899999999999888875   


Q ss_pred             --CCCCEEEEcccccccCCCCCCchh----hHhhhHHHHHH----HHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCC
Q 025786          144 --NAFDAVMHFAAVAYVGESTLDPLK----YYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETP  213 (248)
Q Consensus       144 --~~iD~li~~Ag~~~~~~~~~~~~~----~~~~~~~~~~~----ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~  213 (248)
                        +++|+||||||........+.+.+    .++.|+.++..    +++.|++.+.++||++||......         ..
T Consensus        87 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~---------~~  157 (273)
T PRK08278         87 RFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLDP---------KW  157 (273)
T ss_pred             HhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhccc---------cc
Confidence              589999999997654443333333    34456655444    455555555678999998543210         11


Q ss_pred             CCCCChHHHHHHHHHHHHHHHhhcC---CCcEEEEec
Q 025786          214 QAPINPYGKAKKMAEDIILDFSKNS---DMAVLQCHR  247 (248)
Q Consensus       214 ~~~~~~Y~~sK~a~e~l~~~~~~~~---gi~~~~v~P  247 (248)
                      .++..+|+.||++++.+++.++.++   +++++.++|
T Consensus       158 ~~~~~~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~P  194 (273)
T PRK08278        158 FAPHTAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWP  194 (273)
T ss_pred             cCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeC
Confidence            2557899999999999999999884   799999998

>PRK06179 short chain dehydrogenase; Provisional

Probab=99.92  E-value=1.9e-23  Score=175.00  Aligned_cols=155  Identities=20%  Similarity=0.244  Sum_probs=120.6

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      ++++||||+|+||++++++|+++|++|++++|+..+.+           ...++.++++|++|++++++++++     ++
T Consensus         5 ~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~-----------~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~   73 (270)
T PRK06179          5 KVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAA-----------PIPGVELLELDVTDDASVQAAVDEVIARAGR   73 (270)
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhcc-----------ccCCCeeEEeecCCHHHHHHHHHHHHHhCCC
Confidence            78999999999999999999999999999987532211           123578899999999999988875     57


Q ss_pred             CCEEEEcccccccCCCCCCc----hhhHhhhHHHHH----HHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYVGESTLDP----LKYYHNITSNTL----VVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (248)
Q Consensus       146 iD~li~~Ag~~~~~~~~~~~----~~~~~~~~~~~~----~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (248)
                      +|+||||||........+.+    +..++.|..++.    .+++.|++.+.++||++||...+.           +.+..
T Consensus        74 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~-----------~~~~~  142 (270)
T PRK06179         74 IDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGFL-----------PAPYM  142 (270)
T ss_pred             CCEEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCccccC-----------CCCCc
Confidence            99999999986544433333    334455554533    356667777788999999977653           23346


Q ss_pred             ChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          218 NPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      ..|+.||++.+.+++.++.+   .|+++++++|
T Consensus       143 ~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~p  175 (270)
T PRK06179        143 ALYAASKHAVEGYSESLDHEVRQFGIRVSLVEP  175 (270)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeC
Confidence            78999999999999999876   6999999998

>PRK05866 short chain dehydrogenase; Provisional

Probab=99.92  E-value=3e-23  Score=176.10  Aligned_cols=164  Identities=15%  Similarity=0.114  Sum_probs=122.3

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      ++++||||+||||++++++|+++|++|++++|+...   +.+..+++...+.++.++++|++|.+++.++++.     ++
T Consensus        41 k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~---l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~  117 (293)
T PRK05866         41 KRILLTGASSGIGEAAAEQFARRGATVVAVARREDL---LDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIGG  117 (293)
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHH---HHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            899999999999999999999999999999975432   2222222222234678899999999999888874     58


Q ss_pred             CCEEEEcccccccCCCCCC------chhhHhhhHHH----HHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYVGESTLD------PLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (248)
Q Consensus       146 iD~li~~Ag~~~~~~~~~~------~~~~~~~~~~~----~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~  215 (248)
                      +|+||||||........+.      .+..+..|..+    +..+++.|++.+.++||++||.+.+..          +.+
T Consensus       118 id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~----------~~p  187 (293)
T PRK05866        118 VDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVLSE----------ASP  187 (293)
T ss_pred             CCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCC----------CCC
Confidence            9999999997654332221      12344555555    344666777777789999999765531          123


Q ss_pred             CCChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          216 PINPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      ....|++||++.+.+++.++.+   +|+++++++|
T Consensus       188 ~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~p  222 (293)
T PRK05866        188 LFSVYNASKAALSAVSRVIETEWGDRGVHSTTLYY  222 (293)
T ss_pred             CcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEEc
Confidence            3578999999999999999887   4899999998

>PLN02780 ketoreductase/ oxidoreductase

Probab=99.92  E-value=1.4e-23  Score=180.01  Aligned_cols=168  Identities=15%  Similarity=0.141  Sum_probs=118.6

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCC--HHHHHHHhhc---CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD--AKAVNKFFSE---NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~---~~  145 (248)
                      ++++|||||+|||++++++|+++|++|++++|+..+.++..+.+++.. ...++..+.+|+++  .+.++++.+.   .+
T Consensus        54 ~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~-~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~~d  132 (320)
T PLN02780         54 SWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKY-SKTQIKTVVVDFSGDIDEGVKRIKETIEGLD  132 (320)
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHC-CCcEEEEEEEECCCCcHHHHHHHHHHhcCCC
Confidence            899999999999999999999999999999976543333333222211 12367788999985  3444444433   35


Q ss_pred             CCEEEEccccccc--CCCCCCchh----hHhhhHHH----HHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYV--GESTLDPLK----YYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (248)
Q Consensus       146 iD~li~~Ag~~~~--~~~~~~~~~----~~~~~~~~----~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~  215 (248)
                      +|+||||||+...  ....+.+.+    .++.|+.+    +..++|.|.+++.++||++||.+++...         +.+
T Consensus       133 idilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~---------~~p  203 (320)
T PLN02780        133 VGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAIVIP---------SDP  203 (320)
T ss_pred             ccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCC---------CCc
Confidence            7799999998642  122222233    34455555    4447777877777899999997764210         123


Q ss_pred             CCChHHHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          216 PINPYGKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                      ....|++||++.+.+++.++.|   .|+++++++|.
T Consensus       204 ~~~~Y~aSKaal~~~~~~L~~El~~~gI~V~~v~PG  239 (320)
T PLN02780        204 LYAVYAATKAYIDQFSRCLYVEYKKSGIDVQCQVPL  239 (320)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHhccCeEEEEEeeC
Confidence            4678999999999999999988   48999999994

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=99.92  E-value=2.8e-23  Score=173.67  Aligned_cols=163  Identities=15%  Similarity=0.060  Sum_probs=123.4

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      |+++||||+++||++++++|+++|++|++++|+..+.+   +....+...+.++.++++|++|.+++++++++     ++
T Consensus        11 k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~---~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   87 (265)
T PRK07097         11 KIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVD---KGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVGV   87 (265)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHH---HHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            89999999999999999999999999999886543322   22223322244688999999999999998876     67


Q ss_pred             CCEEEEcccccccCCCCCCchhhHh----hhHHH----HHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYVGESTLDPLKYYH----NITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (248)
Q Consensus       146 iD~li~~Ag~~~~~~~~~~~~~~~~----~~~~~----~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (248)
                      +|+||||||.....+..+.+.+.+.    .|..+    +..+++.|.+.+.++||++||.....           +.++.
T Consensus        88 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~~  156 (265)
T PRK07097         88 IDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSEL-----------GRETV  156 (265)
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCccccC-----------CCCCC
Confidence            9999999998654443444444444    33333    23467777777778999999965431           23346


Q ss_pred             ChHHHHHHHHHHHHHHHhhcC---CCcEEEEec
Q 025786          218 NPYGKAKKMAEDIILDFSKNS---DMAVLQCHR  247 (248)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~~~~~---gi~~~~v~P  247 (248)
                      ..|+.+|++.+.++++++.++   |++++.|.|
T Consensus       157 ~~Y~~sKaal~~l~~~la~e~~~~gi~v~~v~P  189 (265)
T PRK07097        157 SAYAAAKGGLKMLTKNIASEYGEANIQCNGIGP  189 (265)
T ss_pred             ccHHHHHHHHHHHHHHHHHHhhhcCceEEEEEe
Confidence            789999999999999999884   899999998

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=99.92  E-value=2.3e-23  Score=172.99  Aligned_cols=165  Identities=16%  Similarity=0.105  Sum_probs=121.7

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~  144 (248)
                      +|++|||||+|+||++++++|+++|++|++++|+..+   ..+..+++...+.++.++.+|++|++++.+++++     +
T Consensus         9 ~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~---~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   85 (254)
T PRK08085          9 GKNILITGSAQGIGFLLATGLAEYGAEIIINDITAER---AELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIG   85 (254)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHH---HHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcC
Confidence            3899999999999999999999999999999875432   2222233322234677899999999999888765     5


Q ss_pred             CCCEEEEcccccccCCCCCCchhh----HhhhHHHH----HHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCC
Q 025786          145 AFDAVMHFAAVAYVGESTLDPLKY----YHNITSNT----LVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (248)
Q Consensus       145 ~iD~li~~Ag~~~~~~~~~~~~~~----~~~~~~~~----~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~  216 (248)
                      ++|+||||||.....+..+.+.+.    ++.|..+.    ..+++.+.+++.++||++||....           .+.++
T Consensus        86 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~-----------~~~~~  154 (254)
T PRK08085         86 PIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSE-----------LGRDT  154 (254)
T ss_pred             CCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhc-----------cCCCC
Confidence            799999999975443333333333    34444443    335555655666899999996543           12344


Q ss_pred             CChHHHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          217 INPYGKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                      ...|+.||++.+.+++.++.+   +|+++++++|.
T Consensus       155 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pG  189 (254)
T PRK08085        155 ITPYAASKGAVKMLTRGMCVELARHNIQVNGIAPG  189 (254)
T ss_pred             CcchHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeC
Confidence            678999999999999999987   48999999983

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=99.92  E-value=1.6e-23  Score=176.30  Aligned_cols=163  Identities=18%  Similarity=0.161  Sum_probs=121.9

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      |+++||||+||||++++++|+++|++|++++|+...   ..+..+++...+.++.++++|++|.+++..++++     ++
T Consensus        11 k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~---~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   87 (278)
T PRK08277         11 KVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEK---AEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFGP   87 (278)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHH---HHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            899999999999999999999999999999875322   2222233322245688899999999999888764     58


Q ss_pred             CCEEEEcccccccCC---------------CCCCch----hhHhhhHHHH----HHHHHHHHHcCCCEEEEeccceecCC
Q 025786          146 FDAVMHFAAVAYVGE---------------STLDPL----KYYHNITSNT----LVVLESMARHGVDTLIYSSTCATYGE  202 (248)
Q Consensus       146 iD~li~~Ag~~~~~~---------------~~~~~~----~~~~~~~~~~----~~ll~~~~~~~~~~iV~~SS~~~~g~  202 (248)
                      +|+||||||......               ..+...    ..++.|+.+.    +.+++.|.+.+.++||++||...+. 
T Consensus        88 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~-  166 (278)
T PRK08277         88 CDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMNAFT-  166 (278)
T ss_pred             CCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhcC-
Confidence            999999999643221               111112    2334444443    3467777777678999999987763 


Q ss_pred             CCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHhhcC---CCcEEEEec
Q 025786          203 PEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNS---DMAVLQCHR  247 (248)
Q Consensus       203 ~~~~~~~e~~~~~~~~~Y~~sK~a~e~l~~~~~~~~---gi~~~~v~P  247 (248)
                                +.++...|+.||++.+.+++.++.++   |+++++++|
T Consensus       167 ----------~~~~~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~P  204 (278)
T PRK08277        167 ----------PLTKVPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAP  204 (278)
T ss_pred             ----------CCCCCchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEe
Confidence                      34456789999999999999999885   799999998

>PRK06128 oxidoreductase; Provisional

Probab=99.92  E-value=2.9e-23  Score=176.70  Aligned_cols=167  Identities=14%  Similarity=0.161  Sum_probs=123.3

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~  144 (248)
                      +|++|||||+||||++++++|+++|++|+++++.... ....+..+.+...+.++.++++|++|.+++++++++     +
T Consensus        55 ~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  133 (300)
T PRK06128         55 GRKALITGADSGIGRATAIAFAREGADIALNYLPEEE-QDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKELG  133 (300)
T ss_pred             CCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcch-HHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHHhC
Confidence            3899999999999999999999999999987753221 112222222222345688899999999999888875     5


Q ss_pred             CCCEEEEccccccc-CCCC----CCchhhHhhhHHHHHHHHHHHHHc--CCCEEEEeccceecCCCCCCCCCCCCCCCCC
Q 025786          145 AFDAVMHFAAVAYV-GEST----LDPLKYYHNITSNTLVVLESMARH--GVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (248)
Q Consensus       145 ~iD~li~~Ag~~~~-~~~~----~~~~~~~~~~~~~~~~ll~~~~~~--~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (248)
                      ++|+||||||.... ....    +..+..++.|+.++..+++.+...  ..++||++||...+.           +.+..
T Consensus       134 ~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~~~-----------~~~~~  202 (300)
T PRK06128        134 GLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQSYQ-----------PSPTL  202 (300)
T ss_pred             CCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccccC-----------CCCCc
Confidence            89999999997532 2222    233445667777776666666532  236999999988773           23346


Q ss_pred             ChHHHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          218 NPYGKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                      ..|+.||++.+.+++.++.+   .|+++++++|.
T Consensus       203 ~~Y~asK~a~~~~~~~la~el~~~gI~v~~v~PG  236 (300)
T PRK06128        203 LDYASTKAAIVAFTKALAKQVAEKGIRVNAVAPG  236 (300)
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEEC
Confidence            68999999999999999987   58999999984

>PRK05867 short chain dehydrogenase; Provisional

Probab=99.92  E-value=2.2e-23  Score=173.13  Aligned_cols=165  Identities=15%  Similarity=0.208  Sum_probs=120.3

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      |+++||||+||||++++++|+++|++|++++|+..+   ..+..+++...+.++.++.+|++|++++.+++++     ++
T Consensus        10 k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~---~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   86 (253)
T PRK05867         10 KRALITGASTGIGKRVALAYVEAGAQVAIAARHLDA---LEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELGG   86 (253)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHH---HHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            899999999999999999999999999999875433   2233333322345688899999999999888765     68


Q ss_pred             CCEEEEcccccccCCCCCCchhhH----hhhHHHH----HHHHHHHHHcC-CCEEEEeccceecCCCCCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYVGESTLDPLKYY----HNITSNT----LVVLESMARHG-VDTLIYSSTCATYGEPEKMPITEETPQAP  216 (248)
Q Consensus       146 iD~li~~Ag~~~~~~~~~~~~~~~----~~~~~~~----~~ll~~~~~~~-~~~iV~~SS~~~~g~~~~~~~~e~~~~~~  216 (248)
                      +|+||||||.....+..+.+.+.|    +.|..+.    ..+++.|.+++ .++||++||....-.         .....
T Consensus        87 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~---------~~~~~  157 (253)
T PRK05867         87 IDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHII---------NVPQQ  157 (253)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCC---------CCCCC
Confidence            999999999765444333333333    4454443    34556665554 468999998654310         01112


Q ss_pred             CChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          217 INPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      ...|+.||++.+.++++++.+   .|+++++++|
T Consensus       158 ~~~Y~asKaal~~~~~~la~e~~~~gI~vn~i~P  191 (253)
T PRK05867        158 VSHYCASKAAVIHLTKAMAVELAPHKIRVNSVSP  191 (253)
T ss_pred             ccchHHHHHHHHHHHHHHHHHHhHhCeEEEEeec
Confidence            468999999999999999987   4899999998

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.92  E-value=1.7e-23  Score=178.42  Aligned_cols=166  Identities=33%  Similarity=0.525  Sum_probs=135.4

Q ss_pred             EEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEEE
Q 025786           72 HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVMH  151 (248)
Q Consensus        72 ~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li~  151 (248)
                      .||||||+||||++++++|+++|++|+.++|.........          ..+.++.+|++|.+.+.+..+... |+|||
T Consensus         2 ~ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----------~~~~~~~~d~~~~~~~~~~~~~~~-d~vih   70 (314)
T COG0451           2 RILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL----------SGVEFVVLDLTDRDLVDELAKGVP-DAVIH   70 (314)
T ss_pred             eEEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc----------cccceeeecccchHHHHHHHhcCC-CEEEE
Confidence            4999999999999999999999999999997554332111          357788999999977777776322 99999


Q ss_pred             cccccccCCCCC-CchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCC-CCCCCCCC-CCCCCCChHHHHHHHHH
Q 025786          152 FAAVAYVGESTL-DPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEP-EKMPITEE-TPQAPINPYGKAKKMAE  228 (248)
Q Consensus       152 ~Ag~~~~~~~~~-~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~-~~~~~~e~-~~~~~~~~Y~~sK~a~e  228 (248)
                      +|+......... .+.+++..|+.++.++++++.+.+.++||++||.++++.. ...+++|+ .+..|.++|+.||.++|
T Consensus        71 ~aa~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~~~~v~~ss~~~~~~~~~~~~~~E~~~~~~p~~~Yg~sK~~~E  150 (314)
T COG0451          71 LAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAGVKRFVFASSVSVVYGDPPPLPIDEDLGPPRPLNPYGVSKLAAE  150 (314)
T ss_pred             ccccCchhhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCceECCCCCCCCcccccCCCCCCCHHHHHHHHHH
Confidence            999865433322 3556889999999999999999888999998887877654 33468888 67777779999999999


Q ss_pred             HHHHHHhhcCCCcEEEEecC
Q 025786          229 DIILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       229 ~l~~~~~~~~gi~~~~v~Pf  248 (248)
                      .+++.+..++|++++++||.
T Consensus       151 ~~~~~~~~~~~~~~~ilR~~  170 (314)
T COG0451         151 QLLRAYARLYGLPVVILRPF  170 (314)
T ss_pred             HHHHHHHHHhCCCeEEEeee
Confidence            99999999889999999984

>PRK12747 short chain dehydrogenase; Provisional

Probab=99.92  E-value=2.8e-23  Score=172.25  Aligned_cols=164  Identities=19%  Similarity=0.176  Sum_probs=116.5

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-------
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-------  143 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-------  143 (248)
                      |+++||||+||||++++++|+++|++|+++++.  +.+...+...++...+.++..+.+|+++.+++..++++       
T Consensus         5 k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (252)
T PRK12747          5 KVALVTGASRGIGRAIAKRLANDGALVAIHYGN--RKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQN   82 (252)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCC--CHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhhh
Confidence            899999999999999999999999999887531  22222222223322244677889999999887765543       


Q ss_pred             --C--CCCEEEEcccccccCCCCCCchhh----HhhhHHHHHHHHHHHHHc--CCCEEEEeccceecCCCCCCCCCCCCC
Q 025786          144 --N--AFDAVMHFAAVAYVGESTLDPLKY----YHNITSNTLVVLESMARH--GVDTLIYSSTCATYGEPEKMPITEETP  213 (248)
Q Consensus       144 --~--~iD~li~~Ag~~~~~~~~~~~~~~----~~~~~~~~~~ll~~~~~~--~~~~iV~~SS~~~~g~~~~~~~~e~~~  213 (248)
                        +  ++|+||||||........+.+.+.    ++.|+.++..++..+.+.  ..++||++||.+.+.           +
T Consensus        83 ~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~-----------~  151 (252)
T PRK12747         83 RTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRI-----------S  151 (252)
T ss_pred             hcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCccccc-----------C
Confidence              2  799999999975433333333333    345665655544433221  236999999987652           3


Q ss_pred             CCCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          214 QAPINPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       214 ~~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      .++..+|+.||++++.+++.++.+   .|+++++|.|
T Consensus       152 ~~~~~~Y~~sKaa~~~~~~~la~e~~~~girvn~v~P  188 (252)
T PRK12747        152 LPDFIAYSMTKGAINTMTFTLAKQLGARGITVNAILP  188 (252)
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHHHhHcCCEEEEEec
Confidence            344678999999999999999987   4899999998

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.92  E-value=2.3e-23  Score=173.59  Aligned_cols=160  Identities=15%  Similarity=0.068  Sum_probs=115.5

Q ss_pred             eEEEEecCC--chhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----
Q 025786           71 THVLVTGGA--GYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (248)
Q Consensus        71 k~vlITGas--g~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----  143 (248)
                      |+++||||+  +|||++++++|+++|++|++++|+.+..+...+..++.    ....++++|++|.+++++++++     
T Consensus        11 k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~v~~~~~~~~~~~   86 (258)
T PRK07533         11 KRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEEL----DAPIFLPLDVREPGQLEAVFARIAEEW   86 (258)
T ss_pred             CEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhh----ccceEEecCcCCHHHHHHHHHHHHHHc
Confidence            999999998  59999999999999999999987543222222222222    2356789999999999888865     


Q ss_pred             CCCCEEEEccccccc----CCCCCCchhh----HhhhHHH----HHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCC
Q 025786          144 NAFDAVMHFAAVAYV----GESTLDPLKY----YHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEE  211 (248)
Q Consensus       144 ~~iD~li~~Ag~~~~----~~~~~~~~~~----~~~~~~~----~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~  211 (248)
                      +++|++|||||....    ....+.+.+.    ++.|..+    ++.++|.|++  .++||++||.+..           
T Consensus        87 g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~--~g~Ii~iss~~~~-----------  153 (258)
T PRK07533         87 GRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTN--GGSLLTMSYYGAE-----------  153 (258)
T ss_pred             CCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhcc--CCEEEEEeccccc-----------
Confidence            689999999997532    1222223333    3444444    3446676743  3689999986543           


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          212 TPQAPINPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       212 ~~~~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      .+.+....|+.||++.+.+++.++.+   +|+++++|+|
T Consensus       154 ~~~~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~v~P  192 (258)
T PRK07533        154 KVVENYNLMGPVKAALESSVRYLAAELGPKGIRVHAISP  192 (258)
T ss_pred             cCCccchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEec
Confidence            12344678999999999999999987   5899999998

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=99.92  E-value=2.7e-23  Score=171.88  Aligned_cols=161  Identities=13%  Similarity=0.131  Sum_probs=119.8

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      |+++||||+|+||++++++|+++|++|++++|+.  ..+..+.+++.   +.++.++++|+++.+++..++++     ++
T Consensus         6 k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~--~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (248)
T TIGR01832         6 KVALVTGANTGLGQGIAVGLAEAGADIVGAGRSE--PSETQQQVEAL---GRRFLSLTADLSDIEAIKALVDSAVEEFGH   80 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCch--HHHHHHHHHhc---CCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            8999999999999999999999999999998643  12222222222   34688999999999999887764     57


Q ss_pred             CCEEEEcccccccCCCCCC----chhhHhhhHHHHHH----HHHHHHHcC-CCEEEEeccceecCCCCCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYVGESTLD----PLKYYHNITSNTLV----VLESMARHG-VDTLIYSSTCATYGEPEKMPITEETPQAP  216 (248)
Q Consensus       146 iD~li~~Ag~~~~~~~~~~----~~~~~~~~~~~~~~----ll~~~~~~~-~~~iV~~SS~~~~g~~~~~~~~e~~~~~~  216 (248)
                      +|+||||||........+.    .++.++.|..+...    +++.|.+++ .++||++||...+..           .+.
T Consensus        81 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~-----------~~~  149 (248)
T TIGR01832        81 IDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQG-----------GIR  149 (248)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccC-----------CCC
Confidence            9999999998654332222    22334455555444    445554554 579999999877632           223


Q ss_pred             CChHHHHHHHHHHHHHHHhhcC---CCcEEEEec
Q 025786          217 INPYGKAKKMAEDIILDFSKNS---DMAVLQCHR  247 (248)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~~~~~---gi~~~~v~P  247 (248)
                      ...|+.||++.+.+++.++.++   |+++++++|
T Consensus       150 ~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~p  183 (248)
T TIGR01832       150 VPSYTASKHGVAGLTKLLANEWAAKGINVNAIAP  183 (248)
T ss_pred             CchhHHHHHHHHHHHHHHHHHhCccCcEEEEEEE
Confidence            5589999999999999999984   899999998

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.92  E-value=2.9e-23  Score=172.81  Aligned_cols=165  Identities=19%  Similarity=0.139  Sum_probs=125.1

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~  144 (248)
                      +|++|||||+|+||++++++|+++|++|++++|+....++..+.   +...+.++.++++|++|.+++++++++     +
T Consensus         7 ~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~---~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   83 (262)
T PRK13394          7 GKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADE---INKAGGKAIGVAMDVTNEDAVNAGIDKVAERFG   83 (262)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHH---HHhcCceEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            38999999999999999999999999999998755333333322   222244678899999999999888765     5


Q ss_pred             CCCEEEEcccccccCCCCCCc----hhhHhhhHHH----HHHHHHHH-HHcCCCEEEEeccceecCCCCCCCCCCCCCCC
Q 025786          145 AFDAVMHFAAVAYVGESTLDP----LKYYHNITSN----TLVVLESM-ARHGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (248)
Q Consensus       145 ~iD~li~~Ag~~~~~~~~~~~----~~~~~~~~~~----~~~ll~~~-~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~  215 (248)
                      ++|+||||||..........+    +..++.|+.+    +..+++.| ++.+.++||++||...+.           +.+
T Consensus        84 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~~~-----------~~~  152 (262)
T PRK13394         84 SVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHE-----------ASP  152 (262)
T ss_pred             CCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhhcC-----------CCC
Confidence            699999999986543332222    2334456665    66688888 666678999999965542           234


Q ss_pred             CCChHHHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          216 PINPYGKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                      +...|+.+|++.+.+++.++.+   .++++++++|.
T Consensus       153 ~~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~v~pg  188 (262)
T PRK13394        153 LKSAYVTAKHGLLGLARVLAKEGAKHNVRSHVVCPG  188 (262)
T ss_pred             CCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeC
Confidence            4678999999999999999887   58999999983

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.92  E-value=2.1e-23  Score=173.35  Aligned_cols=159  Identities=16%  Similarity=0.119  Sum_probs=116.9

Q ss_pred             eEEEEecCC--chhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----
Q 025786           71 THVLVTGGA--GYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (248)
Q Consensus        71 k~vlITGas--g~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----  143 (248)
                      |+++||||+  +|||++++++|+++|++|++++|+.    +..+..+++.  ..++.++++|++|++++++++++     
T Consensus         8 k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~----~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   81 (252)
T PRK06079          8 KKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQND----RMKKSLQKLV--DEEDLLVECDVASDESIERAFATIKERV   81 (252)
T ss_pred             CEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCch----HHHHHHHhhc--cCceeEEeCCCCCHHHHHHHHHHHHHHh
Confidence            899999999  7999999999999999999988642    2223333332  23578899999999999888765     


Q ss_pred             CCCCEEEEccccccc----CCCCCCchhhHh----hhHHH----HHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCC
Q 025786          144 NAFDAVMHFAAVAYV----GESTLDPLKYYH----NITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEE  211 (248)
Q Consensus       144 ~~iD~li~~Ag~~~~----~~~~~~~~~~~~----~~~~~----~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~  211 (248)
                      +++|+||||||....    .+..+.+.+.|+    .|..+    ++.+++.|.+  .++||++||.+..           
T Consensus        82 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~--~g~Iv~iss~~~~-----------  148 (252)
T PRK06079         82 GKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNP--GASIVTLTYFGSE-----------  148 (252)
T ss_pred             CCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhccc--CceEEEEeccCcc-----------
Confidence            689999999997542    222233333333    33333    3345666643  3689999986653           


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          212 TPQAPINPYGKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       212 ~~~~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                      .+.+.+..|+.||++.+.+++.++.+   +||++++|.|-
T Consensus       149 ~~~~~~~~Y~asKaal~~l~~~la~el~~~gI~vn~i~PG  188 (252)
T PRK06079        149 RAIPNYNVMGIAKAALESSVRYLARDLGKKGIRVNAISAG  188 (252)
T ss_pred             ccCCcchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecC
Confidence            22344678999999999999999987   58999999983

>PRK08303 short chain dehydrogenase; Provisional

Probab=99.92  E-value=4.1e-23  Score=176.12  Aligned_cols=169  Identities=12%  Similarity=0.034  Sum_probs=119.4

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCC-------cchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRG-------NIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE  143 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~-------~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~  143 (248)
                      |+++||||++|||++++++|+++|++|++++|+...       .+...+..+.+...+.++.++++|++|++++++++++
T Consensus         9 k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~   88 (305)
T PRK08303          9 KVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRALVER   88 (305)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHH
Confidence            999999999999999999999999999999986421       1222222223322244678899999999999988875


Q ss_pred             -----CCCCEEEEcc-cccc----cCCCCCCchh----hHhhhHHH----HHHHHHHHHHcCCCEEEEeccceecCCCCC
Q 025786          144 -----NAFDAVMHFA-AVAY----VGESTLDPLK----YYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEK  205 (248)
Q Consensus       144 -----~~iD~li~~A-g~~~----~~~~~~~~~~----~~~~~~~~----~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~  205 (248)
                           +++|+||||| |...    ..+..+.+.+    .++.|+.+    ++.+++.|.+.+.++||++||....-..  
T Consensus        89 ~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g~IV~isS~~~~~~~--  166 (305)
T PRK08303         89 IDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGGLVVEITDGTAEYNA--  166 (305)
T ss_pred             HHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCcEEEEECCccccccC--
Confidence                 6899999999 7421    1222222222    23334433    4457777876666899999995442100  


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          206 MPITEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       206 ~~~~e~~~~~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                            .+......|+.||++...++++++.+   .||++++|.|
T Consensus       167 ------~~~~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~P  205 (305)
T PRK08303        167 ------THYRLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTP  205 (305)
T ss_pred             ------cCCCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecC
Confidence                  01223567999999999999999988   4799999998

>PLN02583 cinnamoyl-CoA reductase

Probab=99.91  E-value=3e-23  Score=176.42  Aligned_cols=173  Identities=16%  Similarity=0.124  Sum_probs=130.6

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li  150 (248)
                      ++|+||||+|+||++++++|+++|++|+++.|+... ....+.+..+.....++.++.+|++|.+++.+++.  ++|.++
T Consensus         7 k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~-~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l~--~~d~v~   83 (297)
T PLN02583          7 KSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGE-TEIEKEIRGLSCEEERLKVFDVDPLDYHSILDALK--GCSGLF   83 (297)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchh-hhHHHHHHhcccCCCceEEEEecCCCHHHHHHHHc--CCCEEE
Confidence            799999999999999999999999999998874322 11222223222223468889999999999988887  689999


Q ss_pred             EcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHc-CCCEEEEeccceecC--CC---CCCCCCCCCCCCCC------C
Q 025786          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARH-GVDTLIYSSTCATYG--EP---EKMPITEETPQAPI------N  218 (248)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~-~~~~iV~~SS~~~~g--~~---~~~~~~e~~~~~~~------~  218 (248)
                      |.++....  .....++.++.|+.++.++++++.+. +.++||++||.++++  ..   ...+++|+.+.++.      .
T Consensus        84 ~~~~~~~~--~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~SS~~a~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~  161 (297)
T PLN02583         84 CCFDPPSD--YPSYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLTAVIWRDDNISTQKDVDERSWSDQNFCRKFKL  161 (297)
T ss_pred             EeCccCCc--ccccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecchHheecccccCCCCCCCCcccCCCHHHHhhccc
Confidence            98764321  11234567889999999999999876 468999999987643  11   22356676543322      3


Q ss_pred             hHHHHHHHHHHHHHHHhhcCCCcEEEEecC
Q 025786          219 PYGKAKKMAEDIILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       219 ~Y~~sK~a~e~l~~~~~~~~gi~~~~v~Pf  248 (248)
                      .|+.||..+|++++.++++.|++++++||.
T Consensus       162 ~Y~~sK~~aE~~~~~~~~~~gi~~v~lrp~  191 (297)
T PLN02583        162 WHALAKTLSEKTAWALAMDRGVNMVSINAG  191 (297)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCcEEEEcCC
Confidence            799999999999999998889999999995

>PRK09186 flagellin modification protein A; Provisional

Probab=99.91  E-value=3.1e-23  Score=172.15  Aligned_cols=175  Identities=18%  Similarity=0.167  Sum_probs=121.7

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      |+++||||+|+||++++++|+++|++|++++|+..+.+...+.+.... ....+.++.+|++|++++.+++++     ++
T Consensus         5 k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~   83 (256)
T PRK09186          5 KTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEF-KSKKLSLVELDITDQESLEEFLSKSAEKYGK   83 (256)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhc-CCCceeEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            899999999999999999999999999999875433322222221111 123466789999999999888875     56


Q ss_pred             CCEEEEccccccc---CCCCCCchhh----HhhhHHH----HHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYV---GESTLDPLKY----YHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQ  214 (248)
Q Consensus       146 iD~li~~Ag~~~~---~~~~~~~~~~----~~~~~~~----~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~  214 (248)
                      +|+|||||+....   ....+.+.+.    +..|..+    ++.+++.|++.+.++||++||..++..... +..+..+.
T Consensus        84 id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~-~~~~~~~~  162 (256)
T PRK09186         84 IDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPKF-EIYEGTSM  162 (256)
T ss_pred             ccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhccccc-hhcccccc
Confidence            9999999975421   1122222222    3334333    455777887777789999999766532211 12223333


Q ss_pred             CCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          215 APINPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       215 ~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      .....|+.||++.+.+++.++.+   .++++++++|
T Consensus       163 ~~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~P  198 (256)
T PRK09186        163 TSPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSP  198 (256)
T ss_pred             CCcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEec
Confidence            33457999999999999999987   5799999998

>PRK05650 short chain dehydrogenase; Provisional

Probab=99.91  E-value=3.5e-23  Score=173.54  Aligned_cols=164  Identities=18%  Similarity=0.190  Sum_probs=124.6

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      |+++||||+|+||++++++|+++|++|++++|+...   ..+...++...+.++.++.+|++|++++.++++.     ++
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~---~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~   77 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEG---GEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGG   77 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHH---HHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            479999999999999999999999999999865433   2333333323345788899999999999887764     57


Q ss_pred             CCEEEEcccccccCCCCCCchhhH----hhhHHH----HHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYVGESTLDPLKYY----HNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (248)
Q Consensus       146 iD~li~~Ag~~~~~~~~~~~~~~~----~~~~~~----~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (248)
                      +|+||||||........+.+.+.+    +.|..+    +..+++.|.+.+.++||++||..++.           +.+..
T Consensus        78 id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~-----------~~~~~  146 (270)
T PRK05650         78 IDVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGLM-----------QGPAM  146 (270)
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhcC-----------CCCCc
Confidence            999999999865544444433333    344433    44477778777778999999977653           33456


Q ss_pred             ChHHHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          218 NPYGKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                      ..|+.||++.+.+++.++.+   .|+++++++|.
T Consensus       147 ~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg  180 (270)
T PRK05650        147 SSYNVAKAGVVALSETLLVELADDEIGVHVVCPS  180 (270)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecC
Confidence            79999999999999999988   48999999983

>PRK07454 short chain dehydrogenase; Provisional

Probab=99.91  E-value=4.1e-23  Score=170.12  Aligned_cols=165  Identities=19%  Similarity=0.207  Sum_probs=123.0

Q ss_pred             CceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----
Q 025786           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (248)
Q Consensus        69 ~~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----  143 (248)
                      .||+++||||+|+||++++++|+++|++|++++|+....+.   ..+.+...+.++.++.+|++|.+++.++++.     
T Consensus         5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~---~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (241)
T PRK07454          5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEA---LAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQF   81 (241)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHH---HHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            35899999999999999999999999999999975433222   2222222245788899999999998887764     


Q ss_pred             CCCCEEEEcccccccCCCCCCchh----hHhhhHHHH----HHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCC
Q 025786          144 NAFDAVMHFAAVAYVGESTLDPLK----YYHNITSNT----LVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (248)
Q Consensus       144 ~~iD~li~~Ag~~~~~~~~~~~~~----~~~~~~~~~----~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~  215 (248)
                      +++|+||||||........+.+.+    .+..|..++    ..+++.+.+.+.++||++||...++           +..
T Consensus        82 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~-----------~~~  150 (241)
T PRK07454         82 GCPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAARN-----------AFP  150 (241)
T ss_pred             CCCCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCc-----------CCC
Confidence            579999999997644332222222    344454443    3466667776678999999987763           234


Q ss_pred             CCChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          216 PINPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      +..+|+.||.+.+.+++.++.+   .|+++++++|
T Consensus       151 ~~~~Y~~sK~~~~~~~~~~a~e~~~~gi~v~~i~p  185 (241)
T PRK07454        151 QWGAYCVSKAALAAFTKCLAEEERSHGIRVCTITL  185 (241)
T ss_pred             CccHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEec
Confidence            4678999999999999998865   5899999998

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=99.91  E-value=3.2e-23  Score=177.95  Aligned_cols=165  Identities=26%  Similarity=0.368  Sum_probs=135.7

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li  150 (248)
                      |+|+||||+|+||+++++.|+++|++|++++|.......       ..  ...+.++.+|++|.+++.++++  ++|+||
T Consensus         1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-------~~--~~~~~~~~~D~~~~~~l~~~~~--~~d~vi   69 (328)
T TIGR03466         1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRN-------LE--GLDVEIVEGDLRDPASLRKAVA--GCRALF   69 (328)
T ss_pred             CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCccccc-------cc--cCCceEEEeeCCCHHHHHHHHh--CCCEEE
Confidence            479999999999999999999999999999975432111       10  1257889999999999999887  689999


Q ss_pred             EcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCC-CCCCCCCCCCCCCC---CChHHHHHHH
Q 025786          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGE-PEKMPITEETPQAP---INPYGKAKKM  226 (248)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~-~~~~~~~e~~~~~~---~~~Y~~sK~a  226 (248)
                      |+|+...  .....++..++.|..++.++++.+.+.+.+++|++||..+|+. ....+++|+.+..+   .+.|+.+|.+
T Consensus        70 ~~a~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~  147 (328)
T TIGR03466        70 HVAADYR--LWAPDPEEMYAANVEGTRNLLRAALEAGVERVVYTSSVATLGVRGDGTPADETTPSSLDDMIGHYKRSKFL  147 (328)
T ss_pred             Eeceecc--cCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEechhhcCcCCCCCCcCccCCCCcccccChHHHHHHH
Confidence            9998542  2234566778889999999999999888889999999999985 34456788776655   4689999999


Q ss_pred             HHHHHHHHhhcCCCcEEEEecC
Q 025786          227 AEDIILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       227 ~e~l~~~~~~~~gi~~~~v~Pf  248 (248)
                      +|++++.++.+++++++++||+
T Consensus       148 ~e~~~~~~~~~~~~~~~ilR~~  169 (328)
T TIGR03466       148 AEQAALEMAAEKGLPVVIVNPS  169 (328)
T ss_pred             HHHHHHHHHHhcCCCEEEEeCC
Confidence            9999999998899999999985

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PRK05599 hypothetical protein; Provisional

Probab=99.91  E-value=2.1e-23  Score=172.70  Aligned_cols=163  Identities=11%  Similarity=0.095  Sum_probs=117.8

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCC-CceEEEEccCCCHHHHHHHhhc-----C
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEP-GRLQFIYADLGDAKAVNKFFSE-----N  144 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~-----~  144 (248)
                      |+++||||++|||++++++|+ +|++|++++|+..+.+   +..+++...+ ..+.++++|++|.+++++++++     +
T Consensus         1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~---~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   76 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQ---GLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAG   76 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHH---HHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcC
Confidence            579999999999999999998 5999999987543333   3333332222 2477899999999999888765     6


Q ss_pred             CCCEEEEcccccccCCCCCCchh----hHhhhHHH----HHHHHHHHHHcC-CCEEEEeccceecCCCCCCCCCCCCCCC
Q 025786          145 AFDAVMHFAAVAYVGESTLDPLK----YYHNITSN----TLVVLESMARHG-VDTLIYSSTCATYGEPEKMPITEETPQA  215 (248)
Q Consensus       145 ~iD~li~~Ag~~~~~~~~~~~~~----~~~~~~~~----~~~ll~~~~~~~-~~~iV~~SS~~~~g~~~~~~~~e~~~~~  215 (248)
                      ++|++|||||........+...+    .+..|..+    +..+++.|.+++ .++||++||.+.+           .+.+
T Consensus        77 ~id~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~-----------~~~~  145 (246)
T PRK05599         77 EISLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGW-----------RARR  145 (246)
T ss_pred             CCCEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccc-----------cCCc
Confidence            89999999998643322222222    22233333    234567776654 5799999997664           2233


Q ss_pred             CCChHHHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          216 PINPYGKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                      ....|+.||++.+.+++.++.+   .|++++.++|.
T Consensus       146 ~~~~Y~asKaa~~~~~~~la~el~~~~I~v~~v~PG  181 (246)
T PRK05599        146 ANYVYGSTKAGLDAFCQGLADSLHGSHVRLIIARPG  181 (246)
T ss_pred             CCcchhhHHHHHHHHHHHHHHHhcCCCceEEEecCC
Confidence            4678999999999999999987   57999999984

>PRK07775 short chain dehydrogenase; Provisional

Probab=99.91  E-value=5.6e-23  Score=172.73  Aligned_cols=165  Identities=16%  Similarity=0.209  Sum_probs=121.9

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~  144 (248)
                      +|+++||||+|+||++++++|+++|++|++++|+...   ..+....+...+.++.++++|++|.+++.+++++     +
T Consensus        10 ~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~---~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   86 (274)
T PRK07775         10 RRPALVAGASSGIGAATAIELAAAGFPVALGARRVEK---CEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALG   86 (274)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHH---HHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            4899999999999999999999999999998864322   2222222222234688899999999999888874     5


Q ss_pred             CCCEEEEcccccccCCCCCCch----hhHhhhHHHHHHH----HHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCC
Q 025786          145 AFDAVMHFAAVAYVGESTLDPL----KYYHNITSNTLVV----LESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (248)
Q Consensus       145 ~iD~li~~Ag~~~~~~~~~~~~----~~~~~~~~~~~~l----l~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~  216 (248)
                      ++|+||||||........+.+.    ..+..|..++.++    ++.+.+.+.++||++||...+.           +.++
T Consensus        87 ~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~-----------~~~~  155 (274)
T PRK07775         87 EIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALR-----------QRPH  155 (274)
T ss_pred             CCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcC-----------CCCC
Confidence            7999999999754333222222    3345666665554    4445555667999999987763           2234


Q ss_pred             CChHHHHHHHHHHHHHHHhhcC---CCcEEEEecC
Q 025786          217 INPYGKAKKMAEDIILDFSKNS---DMAVLQCHRF  248 (248)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~~~~~---gi~~~~v~Pf  248 (248)
                      ...|+.||++.+.++++++.++   |+++++++|.
T Consensus       156 ~~~Y~~sK~a~~~l~~~~~~~~~~~gi~v~~v~pG  190 (274)
T PRK07775        156 MGAYGAAKAGLEAMVTNLQMELEGTGVRASIVHPG  190 (274)
T ss_pred             cchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCC
Confidence            6689999999999999998774   8999999983

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=99.91  E-value=8.5e-24  Score=180.49  Aligned_cols=160  Identities=21%  Similarity=0.327  Sum_probs=121.1

Q ss_pred             EEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHH----Hhhc---CC
Q 025786           73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNK----FFSE---NA  145 (248)
Q Consensus        73 vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~----~~~~---~~  145 (248)
                      ||||||+|+||++++++|+++|++|+++.+......   ..          ..+..+|+.|..+.++    ++..   .+
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~---~~----------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~   68 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGT---KF----------VNLVDLDIADYMDKEDFLAQIMAGDDFGD   68 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcch---HH----------HhhhhhhhhhhhhHHHHHHHHhcccccCC
Confidence            799999999999999999999997666544322110   00          0112355555443333    3221   36


Q ss_pred             CCEEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCCChHHHHHH
Q 025786          146 FDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKK  225 (248)
Q Consensus       146 iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~  225 (248)
                      +|+|||+||.....  ..++...++.|..++.+++++|.+.+. ++|++||.++||.....+.+|+.+..|.++|+.||.
T Consensus        69 ~d~Vih~A~~~~~~--~~~~~~~~~~n~~~t~~ll~~~~~~~~-~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~  145 (308)
T PRK11150         69 IEAIFHEGACSSTT--EWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTDDFIEEREYEKPLNVYGYSKF  145 (308)
T ss_pred             ccEEEECceecCCc--CCChHHHHHHHHHHHHHHHHHHHHcCC-cEEEEcchHHhCcCCCCCCccCCCCCCCCHHHHHHH
Confidence            99999999864332  223455788899999999999998876 799999999998765556788888888999999999


Q ss_pred             HHHHHHHHHhhcCCCcEEEEecC
Q 025786          226 MAEDIILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       226 a~e~l~~~~~~~~gi~~~~v~Pf  248 (248)
                      ++|++++.++.+.+++++++||+
T Consensus       146 ~~E~~~~~~~~~~~~~~~~lR~~  168 (308)
T PRK11150        146 LFDEYVRQILPEANSQICGFRYF  168 (308)
T ss_pred             HHHHHHHHHHHHcCCCEEEEeee
Confidence            99999999998889999999985

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.91  E-value=3.2e-23  Score=173.04  Aligned_cols=161  Identities=12%  Similarity=0.089  Sum_probs=115.5

Q ss_pred             eEEEEecC--CchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----
Q 025786           71 THVLVTGG--AGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (248)
Q Consensus        71 k~vlITGa--sg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----  143 (248)
                      |+++||||  ++|||+++|++|+++|++|++++|..+..    +.++++....+....+++|++|++++++++++     
T Consensus         7 k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~----~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   82 (261)
T PRK08690          7 KKILITGMISERSIAYGIAKACREQGAELAFTYVVDKLE----ERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHW   82 (261)
T ss_pred             cEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHHHH----HHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHh
Confidence            89999997  67999999999999999999987642221    22222222222356789999999999988865     


Q ss_pred             CCCCEEEEcccccccC----C-CCCCchhhHhhh----HHH----HHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCC
Q 025786          144 NAFDAVMHFAAVAYVG----E-STLDPLKYYHNI----TSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITE  210 (248)
Q Consensus       144 ~~iD~li~~Ag~~~~~----~-~~~~~~~~~~~~----~~~----~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e  210 (248)
                      +++|+||||||+....    + .++.+.+.|+.+    ..+    ++.+++.|+++ .++||++||.+.+          
T Consensus        83 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~-~g~Iv~iss~~~~----------  151 (261)
T PRK08690         83 DGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGR-NSAIVALSYLGAV----------  151 (261)
T ss_pred             CCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhc-CcEEEEEcccccc----------
Confidence            6899999999986431    1 122233344433    322    33456666544 3689999997664          


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          211 ETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       211 ~~~~~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                       .+.+.+..|+.||++.+.+++.++.+   +||++++|.|
T Consensus       152 -~~~~~~~~Y~asKaal~~l~~~la~e~~~~gIrVn~i~P  190 (261)
T PRK08690        152 -RAIPNYNVMGMAKASLEAGIRFTAACLGKEGIRCNGISA  190 (261)
T ss_pred             -cCCCCcccchhHHHHHHHHHHHHHHHhhhcCeEEEEEec
Confidence             23345678999999999999999876   6899999998

>PRK06182 short chain dehydrogenase; Validated

Probab=99.91  E-value=2.3e-23  Score=174.86  Aligned_cols=158  Identities=17%  Similarity=0.079  Sum_probs=120.4

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      |+++||||+||||++++++|+++|++|++++|+..   .+.    ++..  .++.++.+|++|.+++++++++     ++
T Consensus         4 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~---~l~----~~~~--~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~   74 (273)
T PRK06182          4 KVALVTGASSGIGKATARRLAAQGYTVYGAARRVD---KME----DLAS--LGVHPLSLDVTDEASIKAAVDTIIAEEGR   74 (273)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHH---HHH----HHHh--CCCeEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence            89999999999999999999999999999886432   221    1111  2477899999999999888864     58


Q ss_pred             CCEEEEcccccccCCCCCC----chhhHhhhHHH----HHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYVGESTLD----PLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (248)
Q Consensus       146 iD~li~~Ag~~~~~~~~~~----~~~~~~~~~~~----~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (248)
                      +|+||||||........+.    .+..++.|..+    +..+++.|++.+.++||++||.+.+.           +.+..
T Consensus        75 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~-----------~~~~~  143 (273)
T PRK06182         75 IDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSGRIINISSMGGKI-----------YTPLG  143 (273)
T ss_pred             CCEEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcC-----------CCCCc
Confidence            9999999998654433322    23344555544    56678888888778999999966531           22234


Q ss_pred             ChHHHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          218 NPYGKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                      ..|+.||++.+.+++.++.+   +|+++++++|.
T Consensus       144 ~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg  177 (273)
T PRK06182        144 AWYHATKFALEGFSDALRLEVAPFGIDVVVIEPG  177 (273)
T ss_pred             cHhHHHHHHHHHHHHHHHHHhcccCCEEEEEecC
Confidence            67999999999999998865   68999999994

>PLN02253 xanthoxin dehydrogenase

Probab=99.91  E-value=3.8e-23  Score=174.10  Aligned_cols=163  Identities=16%  Similarity=0.112  Sum_probs=119.5

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      |+++||||+||||++++++|+++|++|++++|..+.   ..+..+++. ...++.++++|++|.++++++++.     ++
T Consensus        19 k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~---~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~   94 (280)
T PLN02253         19 KVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDL---GQNVCDSLG-GEPNVCFFHCDVTVEDDVSRAVDFTVDKFGT   94 (280)
T ss_pred             CEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHH---HHHHHHHhc-CCCceEEEEeecCCHHHHHHHHHHHHHHhCC
Confidence            899999999999999999999999999999864322   222223332 234688999999999999888875     57


Q ss_pred             CCEEEEcccccccC--CCC----CCchhhHhhhHHHHHH----HHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYVG--EST----LDPLKYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (248)
Q Consensus       146 iD~li~~Ag~~~~~--~~~----~~~~~~~~~~~~~~~~----ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~  215 (248)
                      +|+||||||.....  ...    ++.+..++.|..++..    +++.|.+.+.++||++||....-           +.+
T Consensus        95 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~-----------~~~  163 (280)
T PLN02253         95 LDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAI-----------GGL  163 (280)
T ss_pred             CCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcc-----------cCC
Confidence            99999999975321  111    2233455666666555    44455455567899998865531           122


Q ss_pred             CCChHHHHHHHHHHHHHHHhhcC---CCcEEEEecC
Q 025786          216 PINPYGKAKKMAEDIILDFSKNS---DMAVLQCHRF  248 (248)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~~~~~---gi~~~~v~Pf  248 (248)
                      ....|+.||++.+.+++.++.++   |+++++++|.
T Consensus       164 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg  199 (280)
T PLN02253        164 GPHAYTGSKHAVLGLTRSVAAELGKHGIRVNCVSPY  199 (280)
T ss_pred             CCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeC
Confidence            34579999999999999999884   7999999984

>PRK08263 short chain dehydrogenase; Provisional

Probab=99.91  E-value=5.6e-23  Score=172.78  Aligned_cols=161  Identities=15%  Similarity=0.063  Sum_probs=122.6

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      |+++||||+|+||++++++|+++|++|++++|+...   +.+..+..   ...+.++++|++|.+++.+++++     ++
T Consensus         4 k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~---~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   77 (275)
T PRK08263          4 KVWFITGASRGFGRAWTEAALERGDRVVATARDTAT---LADLAEKY---GDRLLPLALDVTDRAAVFAAVETAVEHFGR   77 (275)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHH---HHHHHHhc---cCCeeEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            789999999999999999999999999999864322   22222211   34678889999999999887765     57


Q ss_pred             CCEEEEcccccccCCCCCCc----hhhHhhhHHHH----HHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYVGESTLDP----LKYYHNITSNT----LVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (248)
Q Consensus       146 iD~li~~Ag~~~~~~~~~~~----~~~~~~~~~~~----~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (248)
                      +|+||||||........+.+    +..++.|+.++    ..+++.|++.+.++||++||.+.+.           +.+..
T Consensus        78 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~-----------~~~~~  146 (275)
T PRK08263         78 LDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGIS-----------AFPMS  146 (275)
T ss_pred             CCEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcC-----------CCCCc
Confidence            99999999986544433333    33455666664    3455666777778999999977763           23346


Q ss_pred             ChHHHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          218 NPYGKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                      ..|+.||++.+.+++.++.+   +|+++++++|.
T Consensus       147 ~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~Pg  180 (275)
T PRK08263        147 GIYHASKWALEGMSEALAQEVAEFGIKVTLVEPG  180 (275)
T ss_pred             cHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEecC
Confidence            78999999999999999886   68999999984

>PRK06138 short chain dehydrogenase; Provisional

Probab=99.91  E-value=5.9e-23  Score=170.02  Aligned_cols=163  Identities=17%  Similarity=0.173  Sum_probs=122.7

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      |+++||||+|+||++++++|+++|++|++++|+...   ..+...++. .+.++.++++|++|++++++++++     ++
T Consensus         6 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~---~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~   81 (252)
T PRK06138          6 RVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEA---AERVAAAIA-AGGRAFARQGDVGSAEAVEALVDFVAARWGR   81 (252)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHH---HHHHHHHHh-cCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            899999999999999999999999999999875332   222222222 234688999999999999888765     58


Q ss_pred             CCEEEEcccccccCCCCCCch----hhHhhhHHHH----HHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYVGESTLDPL----KYYHNITSNT----LVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (248)
Q Consensus       146 iD~li~~Ag~~~~~~~~~~~~----~~~~~~~~~~----~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (248)
                      +|+||||||..........+.    ..+..|..++    ..+++.|++.+.++||++||.....           +.++.
T Consensus        82 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~-----------~~~~~  150 (252)
T PRK06138         82 LDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLALA-----------GGRGR  150 (252)
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhhcc-----------CCCCc
Confidence            999999999765433222222    2345565554    3466667777778999999975542           22346


Q ss_pred             ChHHHHHHHHHHHHHHHhhcC---CCcEEEEecC
Q 025786          218 NPYGKAKKMAEDIILDFSKNS---DMAVLQCHRF  248 (248)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~~~~~---gi~~~~v~Pf  248 (248)
                      .+|+.+|++.+.+++.++.++   |+++++++|.
T Consensus       151 ~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg  184 (252)
T PRK06138        151 AAYVASKGAIASLTRAMALDHATDGIRVNAVAPG  184 (252)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEEC
Confidence            789999999999999999875   8999999984

>PRK05717 oxidoreductase; Validated

Probab=99.91  E-value=4.8e-23  Score=171.25  Aligned_cols=161  Identities=18%  Similarity=0.144  Sum_probs=119.4

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      |+++||||+|+||++++++|+++|++|++++|+..+   ..+..+++   ..++.++++|++|.+++.+++++     ++
T Consensus        11 k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~---~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~   84 (255)
T PRK05717         11 RVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRER---GSKVAKAL---GENAWFIAMDVADEAQVAAGVAEVLGQFGR   84 (255)
T ss_pred             CEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHH---HHHHHHHc---CCceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            899999999999999999999999999999864322   22222222   24678899999999998776654     57


Q ss_pred             CCEEEEcccccccC--CCC----CCchhhHhhhHHHHHHHHHHHHH---cCCCEEEEeccceecCCCCCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYVG--EST----LDPLKYYHNITSNTLVVLESMAR---HGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (248)
Q Consensus       146 iD~li~~Ag~~~~~--~~~----~~~~~~~~~~~~~~~~ll~~~~~---~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~  216 (248)
                      +|+||||||.....  ...    +..+..++.|+.++..+++.+.+   ...++||++||...+.           +.+.
T Consensus        85 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~~-----------~~~~  153 (255)
T PRK05717         85 LDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRARQ-----------SEPD  153 (255)
T ss_pred             CCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhcC-----------CCCC
Confidence            99999999975431  111    12334566777777776666542   2246899999976652           2233


Q ss_pred             CChHHHHHHHHHHHHHHHhhcC--CCcEEEEecC
Q 025786          217 INPYGKAKKMAEDIILDFSKNS--DMAVLQCHRF  248 (248)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~~~~~--gi~~~~v~Pf  248 (248)
                      ..+|+.||++.+.+++.++.++  ++++++++|.
T Consensus       154 ~~~Y~~sKaa~~~~~~~la~~~~~~i~v~~i~Pg  187 (255)
T PRK05717        154 TEAYAASKGGLLALTHALAISLGPEIRVNAVSPG  187 (255)
T ss_pred             CcchHHHHHHHHHHHHHHHHHhcCCCEEEEEecc
Confidence            5689999999999999999885  4899999984

>PRK05872 short chain dehydrogenase; Provisional

Probab=99.91  E-value=7.1e-23  Score=174.04  Aligned_cols=161  Identities=20%  Similarity=0.168  Sum_probs=120.4

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      ++++||||+||||+++++.|+++|++|++++|+..   .+.+..+++. ...++..+.+|++|.+++++++++     ++
T Consensus        10 k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~---~l~~~~~~l~-~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   85 (296)
T PRK05872         10 KVVVVTGAARGIGAELARRLHARGAKLALVDLEEA---ELAALAAELG-GDDRVLTVVADVTDLAAMQAAAEEAVERFGG   85 (296)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHH---HHHHHHHHhc-CCCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            89999999999999999999999999999986432   3333333332 234566778999999999888765     68


Q ss_pred             CCEEEEcccccccCCCCCCchh----hHhhhHHHHHH----HHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYVGESTLDPLK----YYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (248)
Q Consensus       146 iD~li~~Ag~~~~~~~~~~~~~----~~~~~~~~~~~----ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (248)
                      +|+||||||+.......+.+.+    .++.|+.+...    +++.|.+. .++||++||.+.+.           +.+..
T Consensus        86 id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~-----------~~~~~  153 (296)
T PRK05872         86 IDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIER-RGYVLQVSSLAAFA-----------AAPGM  153 (296)
T ss_pred             CCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCEEEEEeCHhhcC-----------CCCCc
Confidence            9999999998654443333333    34455555444    45555554 47999999987763           33446


Q ss_pred             ChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          218 NPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      ..|+.||++.+.+++.++.+   .|+.+++++|
T Consensus       154 ~~Y~asKaal~~~~~~l~~e~~~~gi~v~~v~P  186 (296)
T PRK05872        154 AAYCASKAGVEAFANALRLEVAHHGVTVGSAYL  186 (296)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHCcEEEEEec
Confidence            78999999999999999876   6899999998

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.91  E-value=8.4e-23  Score=174.36  Aligned_cols=166  Identities=16%  Similarity=0.132  Sum_probs=121.0

Q ss_pred             CCceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc----
Q 025786           68 EGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----  143 (248)
Q Consensus        68 ~~~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~----  143 (248)
                      .+ |+++||||++|||++++++|+++|++|++.++...  ....+..+++...+.++.++.+|++|.+++.++++.    
T Consensus        11 ~~-k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~--~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~   87 (306)
T PRK07792         11 SG-KVAVVTGAAAGLGRAEALGLARLGATVVVNDVASA--LDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVGL   87 (306)
T ss_pred             CC-CEEEEECCCChHHHHHHHHHHHCCCEEEEecCCch--hHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHh
Confidence            44 89999999999999999999999999999886322  122222333323345788999999999999888865    


Q ss_pred             CCCCEEEEcccccccCCCCCCch----hhHhhhHHHHHHHH----HHHHHc-------CCCEEEEeccceecCCCCCCCC
Q 025786          144 NAFDAVMHFAAVAYVGESTLDPL----KYYHNITSNTLVVL----ESMARH-------GVDTLIYSSTCATYGEPEKMPI  208 (248)
Q Consensus       144 ~~iD~li~~Ag~~~~~~~~~~~~----~~~~~~~~~~~~ll----~~~~~~-------~~~~iV~~SS~~~~g~~~~~~~  208 (248)
                      +++|+||||||+.......+.+.    ..++.|+.++..++    +.|.+.       ..++||++||...+.       
T Consensus        88 g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-------  160 (306)
T PRK07792         88 GGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLV-------  160 (306)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCccccc-------
Confidence            68999999999865433222222    34455655555544    444432       126899999976652       


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          209 TEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       209 ~e~~~~~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                          +......|+.||++++.+++.++.+   +||+++++.|
T Consensus       161 ----~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~P  198 (306)
T PRK07792        161 ----GPVGQANYGAAKAGITALTLSAARALGRYGVRANAICP  198 (306)
T ss_pred             ----CCCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEECC
Confidence                2234568999999999999999987   6899999998

>PRK07904 short chain dehydrogenase; Provisional

Probab=99.91  E-value=4.7e-23  Score=171.31  Aligned_cols=165  Identities=18%  Similarity=0.158  Sum_probs=121.6

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCC-CEEEEEecCCCC-cchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc----C
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDS-YRVTIVDNLSRG-NIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----N  144 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G-~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~----~  144 (248)
                      ++|+||||+||||++++++|+++| ++|++++|+... .++..+.++..  ...++.++++|++|.+++++++++    +
T Consensus         9 ~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~--~~~~v~~~~~D~~~~~~~~~~~~~~~~~g   86 (253)
T PRK07904          9 QTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAA--GASSVEVIDFDALDTDSHPKVIDAAFAGG   86 (253)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhc--CCCceEEEEecCCChHHHHHHHHHHHhcC
Confidence            899999999999999999999995 899999876543 23232323221  123688999999999987766653    5


Q ss_pred             CCCEEEEcccccccCCC-CCCch---hhHhhhHHHH----HHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCC
Q 025786          145 AFDAVMHFAAVAYVGES-TLDPL---KYYHNITSNT----LVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (248)
Q Consensus       145 ~iD~li~~Ag~~~~~~~-~~~~~---~~~~~~~~~~----~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~  216 (248)
                      ++|++|||+|....... ..+.+   +.++.|+.+.    +.+++.|.+++.++||++||...+.           +.++
T Consensus        87 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~~g~~-----------~~~~  155 (253)
T PRK07904         87 DVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSVAGER-----------VRRS  155 (253)
T ss_pred             CCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCceEEEEechhhcC-----------CCCC
Confidence            89999999997543211 11111   2356666554    3478888888788999999976542           2234


Q ss_pred             CChHHHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          217 INPYGKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                      ...|+.||++...+++.++.+   +|+++++++|.
T Consensus       156 ~~~Y~~sKaa~~~~~~~l~~el~~~~i~v~~v~Pg  190 (253)
T PRK07904        156 NFVYGSTKAGLDGFYLGLGEALREYGVRVLVVRPG  190 (253)
T ss_pred             CcchHHHHHHHHHHHHHHHHHHhhcCCEEEEEeeC
Confidence            567999999999999998766   68999999994

>PRK07890 short chain dehydrogenase; Provisional

Probab=99.91  E-value=3.3e-23  Score=172.21  Aligned_cols=164  Identities=13%  Similarity=0.052  Sum_probs=120.9

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      |+++||||+||||++++++|+++|++|++++|+....   .+..+++...+.++.++.+|++|.++++.++++     ++
T Consensus         6 k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~---~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   82 (258)
T PRK07890          6 KVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERL---DEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFGR   82 (258)
T ss_pred             CEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHH---HHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcCC
Confidence            8999999999999999999999999999999754332   222233322245688999999999999887765     58


Q ss_pred             CCEEEEccccccc-CCCCC----CchhhHhhhHHHHHHHHHHHHH---cCCCEEEEeccceecCCCCCCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYV-GESTL----DPLKYYHNITSNTLVVLESMAR---HGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (248)
Q Consensus       146 iD~li~~Ag~~~~-~~~~~----~~~~~~~~~~~~~~~ll~~~~~---~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (248)
                      +|+||||||.... ....+    ..+..++.|..+...+++.+.+   ...++||++||...+.           +.++.
T Consensus        83 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS~~~~~-----------~~~~~  151 (258)
T PRK07890         83 VDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINSMVLRH-----------SQPKY  151 (258)
T ss_pred             ccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEechhhcc-----------CCCCc
Confidence            9999999997432 22222    2233455666665555555432   1236999999976642           34457


Q ss_pred             ChHHHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          218 NPYGKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                      ..|+.+|.+.+.+++.++.+   .++++++++|.
T Consensus       152 ~~Y~~sK~a~~~l~~~~a~~~~~~~i~v~~v~pg  185 (258)
T PRK07890        152 GAYKMAKGALLAASQSLATELGPQGIRVNSVAPG  185 (258)
T ss_pred             chhHHHHHHHHHHHHHHHHHHhhcCcEEEEEeCC
Confidence            78999999999999999976   48999999984

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.91  E-value=6.4e-23  Score=170.72  Aligned_cols=167  Identities=12%  Similarity=0.073  Sum_probs=122.4

Q ss_pred             eEEEEecCCc--hhHHHHHHHHHHCCCEEEEEecCCCC--------cchhhhhhhhhcCCCCceEEEEccCCCHHHHHHH
Q 025786           71 THVLVTGGAG--YIGSHAALRLLKDSYRVTIVDNLSRG--------NIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKF  140 (248)
Q Consensus        71 k~vlITGasg--~IG~~la~~L~~~G~~V~~~~r~~~~--------~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~  140 (248)
                      |+++||||++  |||+++|++|+++|++|+++++....        .+...+..+++...+.++.++++|++|.+++.++
T Consensus         7 k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~i~~~   86 (256)
T PRK12859          7 KVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQNDAPKEL   86 (256)
T ss_pred             cEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHH
Confidence            8999999994  99999999999999999987643211        1111122222323345788899999999999888


Q ss_pred             hhc-----CCCCEEEEcccccccCCCCCCchh----hHhhhHHHH----HHHHHHHHHcCCCEEEEeccceecCCCCCCC
Q 025786          141 FSE-----NAFDAVMHFAAVAYVGESTLDPLK----YYHNITSNT----LVVLESMARHGVDTLIYSSTCATYGEPEKMP  207 (248)
Q Consensus       141 ~~~-----~~iD~li~~Ag~~~~~~~~~~~~~----~~~~~~~~~----~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~  207 (248)
                      +++     +++|+||||||........+.+.+    .++.|+.+.    ..+++.|.+.+.++||++||....       
T Consensus        87 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~-------  159 (256)
T PRK12859         87 LNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQFQ-------  159 (256)
T ss_pred             HHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEEcccccC-------
Confidence            865     579999999997544333332222    344555543    345777776666899999997654       


Q ss_pred             CCCCCCCCCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          208 ITEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       208 ~~e~~~~~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                          .+.++...|+.||++++.++++++.+   +|++++.|+|-
T Consensus       160 ----~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG  199 (256)
T PRK12859        160 ----GPMVGELAYAATKGAIDALTSSLAAEVAHLGITVNAINPG  199 (256)
T ss_pred             ----CCCCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEc
Confidence                24455789999999999999999987   68999999983

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=99.91  E-value=7.7e-23  Score=169.91  Aligned_cols=161  Identities=12%  Similarity=0.131  Sum_probs=119.6

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      |+++||||+|+||++++++|+++|++|+++++..  .++..+.+.+   .+.++.++++|++|.+++++++++     ++
T Consensus        11 k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~--~~~~~~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   85 (253)
T PRK08993         11 KVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVE--PTETIEQVTA---LGRRFLSLTADLRKIDGIPALLERAVAEFGH   85 (253)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEecCcc--hHHHHHHHHh---cCCeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            8999999999999999999999999999887532  2222222222   234678899999999999988875     68


Q ss_pred             CCEEEEcccccccCCCCC----CchhhHhhhHHHHHH----HHHHHHHcC-CCEEEEeccceecCCCCCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYVGESTL----DPLKYYHNITSNTLV----VLESMARHG-VDTLIYSSTCATYGEPEKMPITEETPQAP  216 (248)
Q Consensus       146 iD~li~~Ag~~~~~~~~~----~~~~~~~~~~~~~~~----ll~~~~~~~-~~~iV~~SS~~~~g~~~~~~~~e~~~~~~  216 (248)
                      +|+||||||........+    +.+..++.|..+...    +++.|.+++ .++||++||...+..           ...
T Consensus        86 ~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~  154 (253)
T PRK08993         86 IDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQG-----------GIR  154 (253)
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccC-----------CCC
Confidence            999999999754333222    233344556555443    555565553 478999999877632           223


Q ss_pred             CChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          217 INPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      ...|+.||++.+.+++.++.+   +|++++.++|
T Consensus       155 ~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~p  188 (253)
T PRK08993        155 VPSYTASKSGVMGVTRLMANEWAKHNINVNAIAP  188 (253)
T ss_pred             CcchHHHHHHHHHHHHHHHHHhhhhCeEEEEEee
Confidence            568999999999999999988   5899999998

>PRK06523 short chain dehydrogenase; Provisional

Probab=99.91  E-value=4.5e-23  Score=171.72  Aligned_cols=157  Identities=20%  Similarity=0.222  Sum_probs=118.4

Q ss_pred             CCceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc----
Q 025786           68 EGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----  143 (248)
Q Consensus        68 ~~~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~----  143 (248)
                      .+ |+++||||+||||++++++|+++|++|++++|+....            ...++.++++|++|.+++.+++++    
T Consensus         8 ~~-k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~------------~~~~~~~~~~D~~~~~~~~~~~~~~~~~   74 (260)
T PRK06523          8 AG-KRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD------------LPEGVEFVAADLTTAEGCAAVARAVLER   74 (260)
T ss_pred             CC-CEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh------------cCCceeEEecCCCCHHHHHHHHHHHHHH
Confidence            44 8999999999999999999999999999998743210            123578899999999998877654    


Q ss_pred             -CCCCEEEEccccccc--CCCCC----CchhhHhhhHHHH----HHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCC
Q 025786          144 -NAFDAVMHFAAVAYV--GESTL----DPLKYYHNITSNT----LVVLESMARHGVDTLIYSSTCATYGEPEKMPITEET  212 (248)
Q Consensus       144 -~~iD~li~~Ag~~~~--~~~~~----~~~~~~~~~~~~~----~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~  212 (248)
                       +++|+||||||....  ....+    ..+..++.|..++    ..+++.|++.+.++||++||...+..          
T Consensus        75 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~----------  144 (260)
T PRK06523         75 LGGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRLP----------  144 (260)
T ss_pred             cCCCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccccCC----------
Confidence             579999999996421  11111    2233444555554    34577777776789999999766521          


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          213 PQAPINPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       213 ~~~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      ...+..+|+.||++++.+++.++.+   .|+++++++|
T Consensus       145 ~~~~~~~Y~~sK~a~~~l~~~~a~~~~~~gi~v~~i~P  182 (260)
T PRK06523        145 LPESTTAYAAAKAALSTYSKSLSKEVAPKGVRVNTVSP  182 (260)
T ss_pred             CCCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEec
Confidence            1124678999999999999999977   4799999998

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=99.91  E-value=4.3e-23  Score=172.05  Aligned_cols=163  Identities=17%  Similarity=0.100  Sum_probs=117.4

Q ss_pred             eEEEEecCC--chhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----
Q 025786           71 THVLVTGGA--GYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (248)
Q Consensus        71 k~vlITGas--g~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----  143 (248)
                      |+++||||+  +|||++++++|+++|++|+++++..+. ....+.++++.....++.++++|++|++++++++++     
T Consensus         7 k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~   85 (258)
T PRK07370          7 KKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEK-GRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQKW   85 (258)
T ss_pred             cEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCccc-chHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHHHc
Confidence            899999986  899999999999999999988754321 112222333322223567889999999999988875     


Q ss_pred             CCCCEEEEccccccc----CCCCCCchhh----HhhhHHH----HHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCC
Q 025786          144 NAFDAVMHFAAVAYV----GESTLDPLKY----YHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEE  211 (248)
Q Consensus       144 ~~iD~li~~Ag~~~~----~~~~~~~~~~----~~~~~~~----~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~  211 (248)
                      +++|+||||||+...    .+..+.+.+.    ++.|..+    ++.+++.|.+  .++||++||....           
T Consensus        86 g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~--~g~Iv~isS~~~~-----------  152 (258)
T PRK07370         86 GKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSE--GGSIVTLTYLGGV-----------  152 (258)
T ss_pred             CCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhh--CCeEEEEeccccc-----------
Confidence            689999999997532    2222222333    3344444    3446666754  3799999996553           


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          212 TPQAPINPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       212 ~~~~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      .+.+....|+.||++.+.+++.++.+   .||++++++|
T Consensus       153 ~~~~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~i~P  191 (258)
T PRK07370        153 RAIPNYNVMGVAKAALEASVRYLAAELGPKNIRVNAISA  191 (258)
T ss_pred             cCCcccchhhHHHHHHHHHHHHHHHHhCcCCeEEEEEec
Confidence            23345678999999999999999987   4799999998

>PLN02686 cinnamoyl-CoA reductase

Probab=99.91  E-value=3.2e-23  Score=181.14  Aligned_cols=177  Identities=17%  Similarity=0.187  Sum_probs=130.0

Q ss_pred             CceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcC---CCCceEEEEccCCCHHHHHHHhhcCC
Q 025786           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFP---EPGRLQFIYADLGDAKAVNKFFSENA  145 (248)
Q Consensus        69 ~~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~~~~  145 (248)
                      .+|+||||||+||||++++++|+++|++|+++.|+....+.+ +.+.....   ....+.++.+|++|.+++.++++  +
T Consensus        52 ~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l-~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~--~  128 (367)
T PLN02686         52 EARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKL-REMEMFGEMGRSNDGIWTVMANLTEPESLHEAFD--G  128 (367)
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHHhhhccccccCCceEEEEcCCCCHHHHHHHHH--h
Confidence            348999999999999999999999999999877643221111 11111000   01257889999999999999987  5


Q ss_pred             CCEEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHc-CCCEEEEeccc--eecCCC--CC--CCCCCCC------
Q 025786          146 FDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARH-GVDTLIYSSTC--ATYGEP--EK--MPITEET------  212 (248)
Q Consensus       146 iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~-~~~~iV~~SS~--~~~g~~--~~--~~~~e~~------  212 (248)
                      +|.+||+|+...............+.+..++.++++++.+. +.+++|++||.  .+|+..  ..  ..++|+.      
T Consensus       129 ~d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~v~r~V~~SS~~~~vyg~~~~~~~~~~i~E~~~~~~~~  208 (367)
T PLN02686        129 CAGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTESVRKCVFTSSLLACVWRQNYPHDLPPVIDEESWSDESF  208 (367)
T ss_pred             ccEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCCccEEEEeccHHHhcccccCCCCCCcccCCCCCCChhh
Confidence            89999999975432211122344567788999999999886 68899999996  466531  11  2355543      


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHhhcCCCcEEEEecC
Q 025786          213 PQAPINPYGKAKKMAEDIILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       213 ~~~~~~~Y~~sK~a~e~l~~~~~~~~gi~~~~v~Pf  248 (248)
                      +..|.++|+.||.++|.+++.+++++|++++++||+
T Consensus       209 ~~~p~~~Y~~sK~~~E~~~~~~~~~~gl~~v~lRp~  244 (367)
T PLN02686        209 CRDNKLWYALGKLKAEKAAWRAARGKGLKLATICPA  244 (367)
T ss_pred             cccccchHHHHHHHHHHHHHHHHHhcCceEEEEcCC
Confidence            334667899999999999999999999999999996

>PRK08643 acetoin reductase; Validated

Probab=99.91  E-value=8.5e-23  Score=169.70  Aligned_cols=164  Identities=21%  Similarity=0.221  Sum_probs=120.3

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      |+++||||+||||+++++.|+++|++|++++|+....+...   .++...+.++.++++|++|++++.+++++     ++
T Consensus         3 k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~---~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   79 (256)
T PRK08643          3 KVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAA---DKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGD   79 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---HHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            89999999999999999999999999999987543322222   22222234678899999999999888875     57


Q ss_pred             CCEEEEcccccccCCCCCCch----hhHhhhHHHHH----HHHHHHHHcC-CCEEEEeccceecCCCCCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYVGESTLDPL----KYYHNITSNTL----VVLESMARHG-VDTLIYSSTCATYGEPEKMPITEETPQAP  216 (248)
Q Consensus       146 iD~li~~Ag~~~~~~~~~~~~----~~~~~~~~~~~----~ll~~~~~~~-~~~iV~~SS~~~~g~~~~~~~~e~~~~~~  216 (248)
                      +|+||||||........+.+.    ..++.|..++.    .+++.+.+.+ .++||++||...+.           +.+.
T Consensus        80 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~-----------~~~~  148 (256)
T PRK08643         80 LNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVV-----------GNPE  148 (256)
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECcccccc-----------CCCC
Confidence            999999999754333333222    33445555543    3555555543 46899999976542           2234


Q ss_pred             CChHHHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          217 INPYGKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                      ...|+.||++.+.+++.++.+   .|++++.++|.
T Consensus       149 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg  183 (256)
T PRK08643        149 LAVYSSTKFAVRGLTQTAARDLASEGITVNAYAPG  183 (256)
T ss_pred             CchhHHHHHHHHHHHHHHHHHhcccCcEEEEEeeC
Confidence            678999999999999999976   58999999984

>PRK08267 short chain dehydrogenase; Provisional

Probab=99.91  E-value=4.6e-23  Score=171.77  Aligned_cols=162  Identities=17%  Similarity=0.143  Sum_probs=120.2

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc------
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE------  143 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~------  143 (248)
                      ||+++||||+||||++++++|+++|++|++++|+...   ..+....+.  +.++.++++|++|.+++.++++.      
T Consensus         1 mk~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~---~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~~~   75 (260)
T PRK08267          1 MKSIFITGAASGIGRATALLFAAEGWRVGAYDINEAG---LAALAAELG--AGNAWTGALDVTDRAAWDAALADFAAATG   75 (260)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHH---HHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            5899999999999999999999999999999864332   222222221  34688999999999999887763      


Q ss_pred             CCCCEEEEcccccccCCCCCC----chhhHhhhHHHHHHH----HHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCC
Q 025786          144 NAFDAVMHFAAVAYVGESTLD----PLKYYHNITSNTLVV----LESMARHGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (248)
Q Consensus       144 ~~iD~li~~Ag~~~~~~~~~~----~~~~~~~~~~~~~~l----l~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~  215 (248)
                      +++|+||||||..........    .+..+..|..++..+    .+.|++.+.++||++||...+.           +..
T Consensus        76 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~-----------~~~  144 (260)
T PRK08267         76 GRLDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAIY-----------GQP  144 (260)
T ss_pred             CCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhCc-----------CCC
Confidence            578999999998654333322    233455666655444    5555666668999999965532           122


Q ss_pred             CCChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          216 PINPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      ....|+.||++.+.+++.++.+   .++++++++|
T Consensus       145 ~~~~Y~~sKaa~~~~~~~l~~~~~~~~i~v~~i~p  179 (260)
T PRK08267        145 GLAVYSATKFAVRGLTEALDLEWRRHGIRVADVMP  179 (260)
T ss_pred             CchhhHHHHHHHHHHHHHHHHHhcccCcEEEEEec
Confidence            3568999999999999999866   5799999998

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=99.91  E-value=1.5e-23  Score=178.39  Aligned_cols=152  Identities=20%  Similarity=0.254  Sum_probs=127.7

Q ss_pred             EEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEEEcc
Q 025786           74 LVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVMHFA  153 (248)
Q Consensus        74 lITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li~~A  153 (248)
                      |||||||+||+++++.|+++|++|+++.+.                       ..+|++|.+++.++++..++|+|||+|
T Consensus         1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~-----------------------~~~Dl~~~~~l~~~~~~~~~d~Vih~A   57 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH-----------------------KELDLTRQADVEAFFAKEKPTYVILAA   57 (306)
T ss_pred             CcccCCCcccHHHHHHHHhCCCcEEEeecc-----------------------ccCCCCCHHHHHHHHhccCCCEEEEee
Confidence            699999999999999999999988765310                       148999999999999877789999999


Q ss_pred             ccccc-CCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCC----CCCCCC-hHHHHHHHH
Q 025786          154 AVAYV-GESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEET----PQAPIN-PYGKAKKMA  227 (248)
Q Consensus       154 g~~~~-~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~----~~~~~~-~Y~~sK~a~  227 (248)
                      +.... ......+.++++.|..++.++++.+.+.+.+++|++||..+|+.....+++|+.    +..|.+ .|+.||.++
T Consensus        58 ~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~  137 (306)
T PLN02725         58 AKVGGIHANMTYPADFIRENLQIQTNVIDAAYRHGVKKLLFLGSSCIYPKFAPQPIPETALLTGPPEPTNEWYAIAKIAG  137 (306)
T ss_pred             eeecccchhhhCcHHHHHHHhHHHHHHHHHHHHcCCCeEEEeCceeecCCCCCCCCCHHHhccCCCCCCcchHHHHHHHH
Confidence            97532 223345677888999999999999999888899999999999876667788875    444444 599999999


Q ss_pred             HHHHHHHhhcCCCcEEEEecC
Q 025786          228 EDIILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       228 e~l~~~~~~~~gi~~~~v~Pf  248 (248)
                      |++++.+.++++++++++||+
T Consensus       138 e~~~~~~~~~~~~~~~~~R~~  158 (306)
T PLN02725        138 IKMCQAYRIQYGWDAISGMPT  158 (306)
T ss_pred             HHHHHHHHHHhCCCEEEEEec
Confidence            999999998899999999985

>PRK08265 short chain dehydrogenase; Provisional

Probab=99.91  E-value=7.5e-23  Score=170.76  Aligned_cols=159  Identities=19%  Similarity=0.203  Sum_probs=117.8

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      |+++||||+||||++++++|+++|++|++++|+...   ..+..+++   +.++.++++|++|.+++.+++++     ++
T Consensus         7 k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~---~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~   80 (261)
T PRK08265          7 KVAIVTGGATLIGAAVARALVAAGARVAIVDIDADN---GAAVAASL---GERARFIATDITDDAAIERAVATVVARFGR   80 (261)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHH---HHHHHHHh---CCeeEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            899999999999999999999999999999875322   22222222   34688899999999999888875     58


Q ss_pred             CCEEEEcccccccCCCCCC---chhhHhhhHHHHH----HHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYVGESTLD---PLKYYHNITSNTL----VVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPIN  218 (248)
Q Consensus       146 iD~li~~Ag~~~~~~~~~~---~~~~~~~~~~~~~----~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~  218 (248)
                      +|+||||||..........   .++.++.|+.+..    .+++.|. ++.++||++||.+.+.           +.+...
T Consensus        81 id~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~g~ii~isS~~~~~-----------~~~~~~  148 (261)
T PRK08265         81 VDILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLA-RGGGAIVNFTSISAKF-----------AQTGRW  148 (261)
T ss_pred             CCEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHh-cCCcEEEEECchhhcc-----------CCCCCc
Confidence            9999999997533222222   2223344544433    3555555 4457999999976542           223466


Q ss_pred             hHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          219 PYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       219 ~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      .|+.||++.+.+++.++.+   +|+++++|+|
T Consensus       149 ~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~P  180 (261)
T PRK08265        149 LYPASKAAIRQLTRSMAMDLAPDGIRVNSVSP  180 (261)
T ss_pred             hhHHHHHHHHHHHHHHHHHhcccCEEEEEEcc
Confidence            8999999999999999987   4899999998

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=99.91  E-value=7.7e-23  Score=170.54  Aligned_cols=165  Identities=16%  Similarity=0.156  Sum_probs=121.9

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      |+++||||+|+||++++++|+++|++|+++.|+..  +......+++...+.++.++.+|++|.+++.++++.     ++
T Consensus         8 k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~--~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~   85 (261)
T PRK08936          8 KVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDE--EEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEFGT   85 (261)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCH--HHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            89999999999999999999999999998876322  222222223322245678899999999999887764     57


Q ss_pred             CCEEEEcccccccCCCCCCchh----hHhhhHHH----HHHHHHHHHHcC-CCEEEEeccceecCCCCCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYVGESTLDPLK----YYHNITSN----TLVVLESMARHG-VDTLIYSSTCATYGEPEKMPITEETPQAP  216 (248)
Q Consensus       146 iD~li~~Ag~~~~~~~~~~~~~----~~~~~~~~----~~~ll~~~~~~~-~~~iV~~SS~~~~g~~~~~~~~e~~~~~~  216 (248)
                      +|+||||||........+.+.+    .++.|+.+    +..+++.|.+.+ .++||++||...+           .+.++
T Consensus        86 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~-----------~~~~~  154 (261)
T PRK08936         86 LDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQ-----------IPWPL  154 (261)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccc-----------CCCCC
Confidence            9999999997654433333333    34455444    345677777664 4799999996543           34556


Q ss_pred             CChHHHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          217 INPYGKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                      ..+|+.||++.+.+++.++.+   .|+++++|+|.
T Consensus       155 ~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg  189 (261)
T PRK08936        155 FVHYAASKGGVKLMTETLAMEYAPKGIRVNNIGPG  189 (261)
T ss_pred             CcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEEEC
Confidence            779999999999999999877   48999999983

>PRK07985 oxidoreductase; Provisional

Probab=99.91  E-value=4.4e-23  Score=175.17  Aligned_cols=166  Identities=17%  Similarity=0.139  Sum_probs=119.7

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      |+++||||+||||++++++|+++|++|++++|... .+...+..+.+...+.++.++.+|++|.+++.+++++     ++
T Consensus        50 k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~  128 (294)
T PRK07985         50 RKALVTGGDSGIGRAAAIAYAREGADVAISYLPVE-EEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKALGG  128 (294)
T ss_pred             CEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcc-hhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            89999999999999999999999999998875322 1112222111212244678899999999999888765     67


Q ss_pred             CCEEEEccccccc-CCCC----CCchhhHhhhHHHHHHHHHHHHHc--CCCEEEEeccceecCCCCCCCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYV-GEST----LDPLKYYHNITSNTLVVLESMARH--GVDTLIYSSTCATYGEPEKMPITEETPQAPIN  218 (248)
Q Consensus       146 iD~li~~Ag~~~~-~~~~----~~~~~~~~~~~~~~~~ll~~~~~~--~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~  218 (248)
                      +|++|||||.... ....    ++.+..++.|+.++..++..+...  ..++||++||...+.           +.+...
T Consensus       129 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~~~-----------~~~~~~  197 (294)
T PRK07985        129 LDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAYQ-----------PSPHLL  197 (294)
T ss_pred             CCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchhcc-----------CCCCcc
Confidence            9999999996421 2222    223344556666665555544331  236999999987763           223456


Q ss_pred             hHHHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          219 PYGKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       219 ~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                      +|+.||++.+.+++.++.+   +|+++++++|.
T Consensus       198 ~Y~asKaal~~l~~~la~el~~~gIrvn~i~PG  230 (294)
T PRK07985        198 DYAATKAAILNYSRGLAKQVAEKGIRVNIVAPG  230 (294)
T ss_pred             hhHHHHHHHHHHHHHHHHHHhHhCcEEEEEECC
Confidence            8999999999999999988   58999999994

>PRK07035 short chain dehydrogenase; Provisional

Probab=99.91  E-value=8.2e-23  Score=169.42  Aligned_cols=163  Identities=17%  Similarity=0.181  Sum_probs=121.2

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      |+++||||+||||.+++++|+++|++|++++|+..+.   .+..+++...+.++.++++|+++.+++++++++     ++
T Consensus         9 k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~---~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   85 (252)
T PRK07035          9 KIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGC---QAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHGR   85 (252)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH---HHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            8999999999999999999999999999998754322   222333322234678899999999999887765     57


Q ss_pred             CCEEEEccccccc-CCCCCCc----hhhHhhhHHHHH----HHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYV-GESTLDP----LKYYHNITSNTL----VVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (248)
Q Consensus       146 iD~li~~Ag~~~~-~~~~~~~----~~~~~~~~~~~~----~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~  216 (248)
                      +|+||||||.... .+..+..    +..++.|..+..    .+++.+.+.+.++||++||...+.           +.++
T Consensus        86 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~-----------~~~~  154 (252)
T PRK07035         86 LDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVS-----------PGDF  154 (252)
T ss_pred             CCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhcC-----------CCCC
Confidence            9999999996421 2222222    234455555543    456666666678999999965542           3345


Q ss_pred             CChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          217 INPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      ...|+.||++++.++++++.+   .|+++++++|
T Consensus       155 ~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~i~P  188 (252)
T PRK07035        155 QGIYSITKAAVISMTKAFAKECAPFGIRVNALLP  188 (252)
T ss_pred             CcchHHHHHHHHHHHHHHHHHHhhcCEEEEEEee
Confidence            778999999999999999987   4899999998

>PRK08862 short chain dehydrogenase; Provisional

Probab=99.91  E-value=1.1e-22  Score=166.40  Aligned_cols=160  Identities=9%  Similarity=0.107  Sum_probs=117.9

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----C-
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N-  144 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~-  144 (248)
                      |+++||||++|||++++++|+++|++|++++|+..+   +.+..+++...+.++..+.+|++|++++++++++     + 
T Consensus         6 k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~---l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   82 (227)
T PRK08862          6 SIILITSAGSVLGRTISCHFARLGATLILCDQDQSA---LKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNR   82 (227)
T ss_pred             eEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHH---HHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            899999999999999999999999999999875433   2233333322244677889999999999888764     5 


Q ss_pred             CCCEEEEccccccc-CCCCCCchhhHh----hhHHH----HHHHHHHHHHcC-CCEEEEeccceecCCCCCCCCCCCCCC
Q 025786          145 AFDAVMHFAAVAYV-GESTLDPLKYYH----NITSN----TLVVLESMARHG-VDTLIYSSTCATYGEPEKMPITEETPQ  214 (248)
Q Consensus       145 ~iD~li~~Ag~~~~-~~~~~~~~~~~~----~~~~~----~~~ll~~~~~~~-~~~iV~~SS~~~~g~~~~~~~~e~~~~  214 (248)
                      ++|++|||||.... ....+.+.+.+.    .|..+    ++.+++.|.+++ .++||++||...+              
T Consensus        83 ~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~--------------  148 (227)
T PRK08862         83 APDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDDH--------------  148 (227)
T ss_pred             CCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCCC--------------
Confidence            89999999985432 233333333333    23222    334677777654 5799999985432              


Q ss_pred             CCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          215 APINPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       215 ~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      ++...|+.||++.+.+++.++.+   +|++++.|.|
T Consensus       149 ~~~~~Y~asKaal~~~~~~la~el~~~~Irvn~v~P  184 (227)
T PRK08862        149 QDLTGVESSNALVSGFTHSWAKELTPFNIRVGGVVP  184 (227)
T ss_pred             CCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEec
Confidence            23567999999999999999987   5899999998

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=99.91  E-value=6.9e-23  Score=170.71  Aligned_cols=162  Identities=20%  Similarity=0.196  Sum_probs=117.6

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      |+++||||++|||++++++|+++|++|++++|+...   ..+..+++.. .+++.++++|++|.+++++++++     ++
T Consensus         1 m~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~---~~~~~~~l~~-~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~   76 (259)
T PRK08340          1 MNVLVTASSRGIGFNVARELLKKGARVVISSRNEEN---LEKALKELKE-YGEVYAVKADLSDKDDLKNLVKEAWELLGG   76 (259)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHH---HHHHHHHHHh-cCCceEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence            479999999999999999999999999999865432   2232333322 23678899999999999888865     68


Q ss_pred             CCEEEEcccccccC--CCCCCchhhH----hhhHHH----HHHHHHHHHH-cCCCEEEEeccceecCCCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYVG--ESTLDPLKYY----HNITSN----TLVVLESMAR-HGVDTLIYSSTCATYGEPEKMPITEETPQ  214 (248)
Q Consensus       146 iD~li~~Ag~~~~~--~~~~~~~~~~----~~~~~~----~~~ll~~~~~-~~~~~iV~~SS~~~~g~~~~~~~~e~~~~  214 (248)
                      +|+||||||.....  ...+...+.|    ..|..+    +..+++.+.+ .+.++||++||..++           .+.
T Consensus        77 id~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~-----------~~~  145 (259)
T PRK08340         77 IDALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVK-----------EPM  145 (259)
T ss_pred             CCEEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccC-----------CCC
Confidence            99999999974321  1222222222    223222    3446666653 456799999997664           234


Q ss_pred             CCCChHHHHHHHHHHHHHHHhhcC---CCcEEEEec
Q 025786          215 APINPYGKAKKMAEDIILDFSKNS---DMAVLQCHR  247 (248)
Q Consensus       215 ~~~~~Y~~sK~a~e~l~~~~~~~~---gi~~~~v~P  247 (248)
                      ++...|+.||++.+.+++.++.++   |++++.|+|
T Consensus       146 ~~~~~y~~sKaa~~~~~~~la~e~~~~gI~v~~v~p  181 (259)
T PRK08340        146 PPLVLADVTRAGLVQLAKGVSRTYGGKGIRAYTVLL  181 (259)
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHhCCCCEEEEEecc
Confidence            456789999999999999999884   799999988

>PRK06172 short chain dehydrogenase; Provisional

Probab=99.91  E-value=9.9e-23  Score=169.01  Aligned_cols=163  Identities=17%  Similarity=0.196  Sum_probs=122.4

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      |+++||||+|+||++++++|+++|++|++++|+..+.++..+   ++...+.++.++.+|++|.+++.+++++     ++
T Consensus         8 k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~---~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~   84 (253)
T PRK06172          8 KVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVA---LIREAGGEALFVACDVTRDAEVKALVEQTIAAYGR   84 (253)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            899999999999999999999999999999875433222222   2222245688999999999999888765     57


Q ss_pred             CCEEEEcccccccCC-CCC----CchhhHhhhHHHHH----HHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYVGE-STL----DPLKYYHNITSNTL----VVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (248)
Q Consensus       146 iD~li~~Ag~~~~~~-~~~----~~~~~~~~~~~~~~----~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~  216 (248)
                      +|+||||||...... ..+    +.++.++.|+.+..    .+++.+.+.+.++||++||...+.           +.++
T Consensus        85 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~~-----------~~~~  153 (253)
T PRK06172         85 LDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLG-----------AAPK  153 (253)
T ss_pred             CCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcc-----------CCCC
Confidence            999999999753221 222    22333445555543    456667666667999999987763           3345


Q ss_pred             CChHHHHHHHHHHHHHHHhhcC---CCcEEEEec
Q 025786          217 INPYGKAKKMAEDIILDFSKNS---DMAVLQCHR  247 (248)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~~~~~---gi~~~~v~P  247 (248)
                      ...|+.||++.+.+++.++.++   |+++++++|
T Consensus       154 ~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~i~P  187 (253)
T PRK06172        154 MSIYAASKHAVIGLTKSAAIEYAKKGIRVNAVCP  187 (253)
T ss_pred             CchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEe
Confidence            7789999999999999999884   799999998

>PRK12743 oxidoreductase; Provisional

Probab=99.91  E-value=9.1e-23  Score=169.69  Aligned_cols=165  Identities=16%  Similarity=0.159  Sum_probs=120.2

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~  144 (248)
                      +|+++||||+|+||++++++|+++|++|+++++..  .+...+..+++...+.++.++.+|++|++++++++++     +
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   79 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSD--EEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLG   79 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCC--hHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            37999999999999999999999999999886532  2222222233323345788999999999999888765     6


Q ss_pred             CCCEEEEcccccccCCCCCCc----hhhHhhhHHHHHHH----HHHHHHcC-CCEEEEeccceecCCCCCCCCCCCCCCC
Q 025786          145 AFDAVMHFAAVAYVGESTLDP----LKYYHNITSNTLVV----LESMARHG-VDTLIYSSTCATYGEPEKMPITEETPQA  215 (248)
Q Consensus       145 ~iD~li~~Ag~~~~~~~~~~~----~~~~~~~~~~~~~l----l~~~~~~~-~~~iV~~SS~~~~g~~~~~~~~e~~~~~  215 (248)
                      ++|+||||||........+.+    +..+..|..+...+    ++.+.+++ .++||++||....           .+.+
T Consensus        80 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~-----------~~~~  148 (256)
T PRK12743         80 RIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEH-----------TPLP  148 (256)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeecccc-----------CCCC
Confidence            799999999976443322222    23344555554444    44554443 4699999996443           3455


Q ss_pred             CCChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          216 PINPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      +...|+.+|++.+.++++++.+   .|++++.|+|
T Consensus       149 ~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~P  183 (256)
T PRK12743        149 GASAYTAAKHALGGLTKAMALELVEHGILVNAVAP  183 (256)
T ss_pred             CcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEe
Confidence            6779999999999999999986   4799999998

>PRK09134 short chain dehydrogenase; Provisional

Probab=99.91  E-value=1.1e-22  Score=169.27  Aligned_cols=165  Identities=16%  Similarity=0.114  Sum_probs=118.8

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~  144 (248)
                      +|+++||||+||||++++++|+++|++|+++++..  .+...+..+++...+.++.++.+|++|.+++.+++++     +
T Consensus         9 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~   86 (258)
T PRK09134          9 PRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRS--RDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAALG   86 (258)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCC--HHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            48999999999999999999999999998876532  1222222222222245688899999999999888765     5


Q ss_pred             CCCEEEEcccccccCCCCC----CchhhHhhhHHHHHHHHHH----HHHcCCCEEEEeccceecCCCCCCCCCCCCCCCC
Q 025786          145 AFDAVMHFAAVAYVGESTL----DPLKYYHNITSNTLVVLES----MARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (248)
Q Consensus       145 ~iD~li~~Ag~~~~~~~~~----~~~~~~~~~~~~~~~ll~~----~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~  216 (248)
                      ++|+||||||........+    ..+..++.|..++..++..    +.+...+++|+++|...+.           +.+.
T Consensus        87 ~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~-----------~~p~  155 (258)
T PRK09134         87 PITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWN-----------LNPD  155 (258)
T ss_pred             CCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcC-----------CCCC
Confidence            7999999999754333222    2334556666665555544    4444457899998865542           2233


Q ss_pred             CChHHHHHHHHHHHHHHHhhcC--CCcEEEEec
Q 025786          217 INPYGKAKKMAEDIILDFSKNS--DMAVLQCHR  247 (248)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~~~~~--gi~~~~v~P  247 (248)
                      ..+|+.||++++.+++.++.++  ++++++++|
T Consensus       156 ~~~Y~~sK~a~~~~~~~la~~~~~~i~v~~i~P  188 (258)
T PRK09134        156 FLSYTLSKAALWTATRTLAQALAPRIRVNAIGP  188 (258)
T ss_pred             chHHHHHHHHHHHHHHHHHHHhcCCcEEEEeec
Confidence            5689999999999999999875  389999988

>PRK06914 short chain dehydrogenase; Provisional

Probab=99.91  E-value=8e-23  Score=172.10  Aligned_cols=165  Identities=18%  Similarity=0.153  Sum_probs=120.9

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      ++++||||+|+||+++++.|+++|++|++++|+....+...+..... ....++.++.+|++|++++++ +++     ++
T Consensus         4 k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~~~   81 (280)
T PRK06914          4 KIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQL-NLQQNIKVQQLDVTDQNSIHN-FQLVLKEIGR   81 (280)
T ss_pred             CEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhc-CCCCceeEEecCCCCHHHHHH-HHHHHHhcCC
Confidence            78999999999999999999999999999987543332222222221 113468899999999999877 543     57


Q ss_pred             CCEEEEcccccccCCCCCCc----hhhHhhhHHHHHH----HHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYVGESTLDP----LKYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (248)
Q Consensus       146 iD~li~~Ag~~~~~~~~~~~----~~~~~~~~~~~~~----ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (248)
                      +|+||||||........+.+    ++.++.|..++..    +++.|++.+.++||++||...+.           +.++.
T Consensus        82 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~-----------~~~~~  150 (280)
T PRK06914         82 IDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISGRV-----------GFPGL  150 (280)
T ss_pred             eeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccccC-----------CCCCC
Confidence            99999999976544333222    2334566666444    45556777778999999965541           23456


Q ss_pred             ChHHHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          218 NPYGKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                      ..|+.||++.+.++++++.+   +|+++++++|.
T Consensus       151 ~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg  184 (280)
T PRK06914        151 SPYVSSKYALEGFSESLRLELKPFGIDVALIEPG  184 (280)
T ss_pred             chhHHhHHHHHHHHHHHHHHhhhhCCEEEEEecC
Confidence            78999999999999999844   69999999994

>PRK12746 short chain dehydrogenase; Provisional

Probab=99.91  E-value=1.1e-22  Score=168.83  Aligned_cols=164  Identities=20%  Similarity=0.201  Sum_probs=120.9

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEE-ecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc------
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIV-DNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE------  143 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~------  143 (248)
                      ++++||||+||||++++++|+++|++|+++ .|+   .+...+..+.+...+.++.++++|++|.+++.+++++      
T Consensus         7 ~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~---~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~   83 (254)
T PRK12746          7 KVALVTGASRGIGRAIAMRLANDGALVAIHYGRN---KQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQ   83 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCC---HHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhc
Confidence            899999999999999999999999999875 342   2223333333322245688899999999999888774      


Q ss_pred             -----CCCCEEEEcccccccCCCCCCchhh----HhhhHHHHHHHHHHHHH--cCCCEEEEeccceecCCCCCCCCCCCC
Q 025786          144 -----NAFDAVMHFAAVAYVGESTLDPLKY----YHNITSNTLVVLESMAR--HGVDTLIYSSTCATYGEPEKMPITEET  212 (248)
Q Consensus       144 -----~~iD~li~~Ag~~~~~~~~~~~~~~----~~~~~~~~~~ll~~~~~--~~~~~iV~~SS~~~~g~~~~~~~~e~~  212 (248)
                           +++|+||||||........+.+.+.    ++.|+.++.++++.+.+  ...+++|++||..++.           
T Consensus        84 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~~~~~-----------  152 (254)
T PRK12746         84 IRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEVRL-----------  152 (254)
T ss_pred             cccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCHHhcC-----------
Confidence                 3699999999976544333333333    34666666666666544  2346899999977763           


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          213 PQAPINPYGKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       213 ~~~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                      +.++...|+.||++.+.++++++.+   .++++++++|.
T Consensus       153 ~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg  191 (254)
T PRK12746        153 GFTGSIAYGLSKGALNTMTLPLAKHLGERGITVNTIMPG  191 (254)
T ss_pred             CCCCCcchHhhHHHHHHHHHHHHHHHhhcCcEEEEEEEC
Confidence            3345678999999999999999886   57999999984

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.91  E-value=1.1e-22  Score=168.92  Aligned_cols=164  Identities=21%  Similarity=0.152  Sum_probs=125.4

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      ++++||||+|+||++++++|+++|++|++++|+..+.+...+   ++...+.++.++.+|++|.+++.+++++     ++
T Consensus         5 ~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~---~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   81 (258)
T PRK12429          5 KVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAE---ALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGG   81 (258)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH---HHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            899999999999999999999999999999976543333222   2222245788999999999999888875     57


Q ss_pred             CCEEEEcccccccCCCCCCchh----hHhhhHHH----HHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYVGESTLDPLK----YYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (248)
Q Consensus       146 iD~li~~Ag~~~~~~~~~~~~~----~~~~~~~~----~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (248)
                      +|+||||||........+.+.+    .++.|..+    +..+++.|++.+.++||++||...+.           +.++.
T Consensus        82 ~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~-----------~~~~~  150 (258)
T PRK12429         82 VDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGLV-----------GSAGK  150 (258)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhcc-----------CCCCc
Confidence            9999999997654433333333    33445444    55677888877788999999976652           23457


Q ss_pred             ChHHHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          218 NPYGKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                      +.|+.+|++.+.+++.++.+   .++++++++|.
T Consensus       151 ~~y~~~k~a~~~~~~~l~~~~~~~~i~v~~~~pg  184 (258)
T PRK12429        151 AAYVSAKHGLIGLTKVVALEGATHGVTVNAICPG  184 (258)
T ss_pred             chhHHHHHHHHHHHHHHHHHhcccCeEEEEEecC
Confidence            88999999999999999876   47999999984

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.91  E-value=6.7e-23  Score=170.27  Aligned_cols=162  Identities=18%  Similarity=0.169  Sum_probs=119.9

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li  150 (248)
                      +++|||||+|+||++++++|+++|++|++++|+..+.+...+   .......++.++.+|++|.+++.+++. .++|+||
T Consensus         3 ~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~---~~~~~~~~~~~~~~D~~~~~~~~~~~~-~~id~vi   78 (257)
T PRK09291          3 KTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRA---EAARRGLALRVEKLDLTDAIDRAQAAE-WDVDVLL   78 (257)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---HHHhcCCcceEEEeeCCCHHHHHHHhc-CCCCEEE
Confidence            789999999999999999999999999998875432222221   111223468889999999999988775 3799999


Q ss_pred             EcccccccCCCCCCchhh----HhhhHHH----HHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCCChHHH
Q 025786          151 HFAAVAYVGESTLDPLKY----YHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGK  222 (248)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~----~~~~~~~----~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~  222 (248)
                      ||||.....+..+.+.+.    +..|..+    +..+++.+.+.+.++||++||...+.           ..+....|+.
T Consensus        79 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS~~~~~-----------~~~~~~~Y~~  147 (257)
T PRK09291         79 NNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSSMAGLI-----------TGPFTGAYCA  147 (257)
T ss_pred             ECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcChhhcc-----------CCCCcchhHH
Confidence            999976544433333333    3344444    33466777777778999999976542           2234678999


Q ss_pred             HHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          223 AKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       223 sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      ||.+.+.+++.++.+   .|+++++++|
T Consensus       148 sK~a~~~~~~~l~~~~~~~gi~~~~v~p  175 (257)
T PRK09291        148 SKHALEAIAEAMHAELKPFGIQVATVNP  175 (257)
T ss_pred             HHHHHHHHHHHHHHHHHhcCcEEEEEec
Confidence            999999999998876   6999999998

>PRK07831 short chain dehydrogenase; Provisional

Probab=99.91  E-value=1.6e-22  Score=168.66  Aligned_cols=167  Identities=19%  Similarity=0.158  Sum_probs=121.1

Q ss_pred             ceEEEEecCCc-hhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----
Q 025786           70 VTHVLVTGGAG-YIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (248)
Q Consensus        70 ~k~vlITGasg-~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----  143 (248)
                      +|+++||||+| |||+++++.|+++|++|++++|+..+.+...+.+++.. ...++.++++|+++.+++++++++     
T Consensus        17 ~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   95 (262)
T PRK07831         17 GKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAEL-GLGRVEAVVCDVTSEAQVDALIDAAVERL   95 (262)
T ss_pred             CCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhc-CCceEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            38999999996 89999999999999999998865433222222222211 123678899999999999888865     


Q ss_pred             CCCCEEEEcccccccCCCCCCchhhHh----hhHHHH----HHHHHHHHHcC-CCEEEEeccceecCCCCCCCCCCCCCC
Q 025786          144 NAFDAVMHFAAVAYVGESTLDPLKYYH----NITSNT----LVVLESMARHG-VDTLIYSSTCATYGEPEKMPITEETPQ  214 (248)
Q Consensus       144 ~~iD~li~~Ag~~~~~~~~~~~~~~~~----~~~~~~----~~ll~~~~~~~-~~~iV~~SS~~~~g~~~~~~~~e~~~~  214 (248)
                      +++|+||||||........+.+.+.|.    .|..+.    ..+++.|++.+ .++||++||...+           .+.
T Consensus        96 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~-----------~~~  164 (262)
T PRK07831         96 GRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGW-----------RAQ  164 (262)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhc-----------CCC
Confidence            589999999997544333333333333    344443    33566666655 5799999986654           233


Q ss_pred             CCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          215 APINPYGKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       215 ~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                      ++...|+.||++.+.+++.++.+   +|+++++++|.
T Consensus       165 ~~~~~Y~~sKaal~~~~~~la~e~~~~gI~v~~i~Pg  201 (262)
T PRK07831        165 HGQAHYAAAKAGVMALTRCSALEAAEYGVRINAVAPS  201 (262)
T ss_pred             CCCcchHHHHHHHHHHHHHHHHHhCccCeEEEEEeeC
Confidence            45678999999999999999987   68999999983

>PRK06483 dihydromonapterin reductase; Provisional

Probab=99.91  E-value=1.1e-22  Score=167.01  Aligned_cols=158  Identities=18%  Similarity=0.224  Sum_probs=116.4

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      |+++||||+||||++++++|+++|++|++++|+...   ..+.++..     .+.++.+|++|.+++.+++++     ++
T Consensus         3 k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~---~~~~~~~~-----~~~~~~~D~~~~~~~~~~~~~~~~~~~~   74 (236)
T PRK06483          3 APILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYP---AIDGLRQA-----GAQCIQADFSTNAGIMAFIDELKQHTDG   74 (236)
T ss_pred             ceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchh---HHHHHHHc-----CCEEEEcCCCCHHHHHHHHHHHHhhCCC
Confidence            799999999999999999999999999999875422   22222221     367889999999999888765     56


Q ss_pred             CCEEEEcccccccCCCCCCchhhHh----hhHHH----HHHHHHHHHHcC--CCEEEEeccceecCCCCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYVGESTLDPLKYYH----NITSN----TLVVLESMARHG--VDTLIYSSTCATYGEPEKMPITEETPQA  215 (248)
Q Consensus       146 iD~li~~Ag~~~~~~~~~~~~~~~~----~~~~~----~~~ll~~~~~~~--~~~iV~~SS~~~~g~~~~~~~~e~~~~~  215 (248)
                      +|++|||||........+.+.+.|+    .|..+    +..+++.|.+.+  .++||++||....           .+.+
T Consensus        75 id~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~-----------~~~~  143 (236)
T PRK06483         75 LRAIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVE-----------KGSD  143 (236)
T ss_pred             ccEEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhc-----------cCCC
Confidence            9999999997543322222333333    33333    334667776654  5689999986543           1233


Q ss_pred             CCChHHHHHHHHHHHHHHHhhcC--CCcEEEEec
Q 025786          216 PINPYGKAKKMAEDIILDFSKNS--DMAVLQCHR  247 (248)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~~~~~--gi~~~~v~P  247 (248)
                      ....|+.||++.+.+++.++.++  ++++++|+|
T Consensus       144 ~~~~Y~asKaal~~l~~~~a~e~~~~irvn~v~P  177 (236)
T PRK06483        144 KHIAYAASKAALDNMTLSFAAKLAPEVKVNSIAP  177 (236)
T ss_pred             CCccHHHHHHHHHHHHHHHHHHHCCCcEEEEEcc
Confidence            46789999999999999999985  599999998

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=99.91  E-value=1.3e-22  Score=168.83  Aligned_cols=166  Identities=16%  Similarity=0.106  Sum_probs=120.8

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      |+++||||+|+||+++++.|+++|++|++++|+....+...+.+.... ...++.++.+|++|.+++.+++++     ++
T Consensus         3 k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   81 (259)
T PRK12384          3 QVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEY-GEGMAYGFGADATSEQSVLALSRGVDEIFGR   81 (259)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhc-CCceeEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            789999999999999999999999999999875433222222222211 113688999999999999888765     68


Q ss_pred             CCEEEEcccccccCCCCCCchhhH----hhhHHHHH----HHHHHHHHcC-CCEEEEeccceecCCCCCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYVGESTLDPLKYY----HNITSNTL----VVLESMARHG-VDTLIYSSTCATYGEPEKMPITEETPQAP  216 (248)
Q Consensus       146 iD~li~~Ag~~~~~~~~~~~~~~~----~~~~~~~~----~ll~~~~~~~-~~~iV~~SS~~~~g~~~~~~~~e~~~~~~  216 (248)
                      +|++|||||........+.+.+.+    +.|..++.    .+++.|.+.+ .++||++||....           .+...
T Consensus        82 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~-----------~~~~~  150 (259)
T PRK12384         82 VDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGK-----------VGSKH  150 (259)
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccc-----------cCCCC
Confidence            999999999765444333333344    45555543    4566666555 4699999986532           12233


Q ss_pred             CChHHHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          217 INPYGKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                      ..+|+.||++.+.+++.++.+   +|+++++++|.
T Consensus       151 ~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~pg  185 (259)
T PRK12384        151 NSGYSAAKFGGVGLTQSLALDLAEYGITVHSLMLG  185 (259)
T ss_pred             CchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecC
Confidence            568999999999999999865   79999999984

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=99.91  E-value=1.5e-22  Score=167.24  Aligned_cols=165  Identities=19%  Similarity=0.161  Sum_probs=120.2

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      |+++||||+|+||++++++|+++|++|++..+.  ......+.++++...+.++..+.+|++|.+++.+++++     ++
T Consensus         4 k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   81 (246)
T PRK12938          4 RIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGP--NSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVGE   81 (246)
T ss_pred             CEEEEECCCChHHHHHHHHHHHcCCEEEEEcCC--ChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            899999999999999999999999999885431  12222223333322344677889999999999888764     57


Q ss_pred             CCEEEEcccccccCCCCCCc----hhhHhhhHHH----HHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYVGESTLDP----LKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (248)
Q Consensus       146 iD~li~~Ag~~~~~~~~~~~----~~~~~~~~~~----~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (248)
                      +|+||||||........+.+    +..++.|..+    +..+++.|.+.+.++||++||....           .+.++.
T Consensus        82 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~-----------~~~~~~  150 (246)
T PRK12938         82 IDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQ-----------KGQFGQ  150 (246)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhcc-----------CCCCCC
Confidence            99999999975433222222    2334455555    4446677777777899999996543           123456


Q ss_pred             ChHHHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          218 NPYGKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                      ..|+.+|++.+.+++.++.+   .|+++++++|.
T Consensus       151 ~~y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg  184 (246)
T PRK12938        151 TNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPG  184 (246)
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEec
Confidence            78999999999999999876   57999999983

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=99.91  E-value=8e-23  Score=175.09  Aligned_cols=174  Identities=14%  Similarity=0.124  Sum_probs=122.8

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCC-CEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDS-YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~  144 (248)
                      ++++||||++|||++++++|+++| ++|++++|+..+   ..+..+++...+.++.++.+|++|.+++++++++     +
T Consensus         4 k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~---~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   80 (314)
T TIGR01289         4 PTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLK---AEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGR   80 (314)
T ss_pred             CEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHH---HHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence            799999999999999999999999 999999875432   2222233322234678899999999999888765     5


Q ss_pred             CCCEEEEcccccccC-CCCC-C---chhhHhhhHHH----HHHHHHHHHHcC--CCEEEEeccceecCCCCC--------
Q 025786          145 AFDAVMHFAAVAYVG-ESTL-D---PLKYYHNITSN----TLVVLESMARHG--VDTLIYSSTCATYGEPEK--------  205 (248)
Q Consensus       145 ~iD~li~~Ag~~~~~-~~~~-~---~~~~~~~~~~~----~~~ll~~~~~~~--~~~iV~~SS~~~~g~~~~--------  205 (248)
                      ++|+||||||+.... .... +   .+..++.|..+    +..+++.|++.+  .++||++||..++.....        
T Consensus        81 ~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~  160 (314)
T TIGR01289        81 PLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNTNTLAGNVPPKAN  160 (314)
T ss_pred             CCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccccccCCCcCCCccc
Confidence            799999999975321 1111 2   22334555555    444678887653  479999999877532100        


Q ss_pred             -C-------------CCCCCCCCCCCChHHHHHHHHHHHHHHHhhc----CCCcEEEEec
Q 025786          206 -M-------------PITEETPQAPINPYGKAKKMAEDIILDFSKN----SDMAVLQCHR  247 (248)
Q Consensus       206 -~-------------~~~e~~~~~~~~~Y~~sK~a~e~l~~~~~~~----~gi~~~~v~P  247 (248)
                       .             +..+..+..+...|+.||++...++++++++    .|+.++.++|
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~P  220 (314)
T TIGR01289       161 LGDLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYP  220 (314)
T ss_pred             ccccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecC
Confidence             0             0111233456778999999999999999876    3799999998

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=99.91  E-value=1.5e-22  Score=167.23  Aligned_cols=164  Identities=18%  Similarity=0.134  Sum_probs=121.3

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      ++++||||+|+||++++++|+++|++|+++.+.  ..+...+..+++...+.++.++++|++|.+++.+++++     ++
T Consensus         7 ~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   84 (247)
T PRK12935          7 KVAIVTGGAKGIGKAITVALAQEGAKVVINYNS--SKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFGK   84 (247)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCC--cHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            899999999999999999999999999876542  22222233333333345788999999999999988876     67


Q ss_pred             CCEEEEcccccccCCCC----CCchhhHhhhHHHHHHHH----HHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYVGEST----LDPLKYYHNITSNTLVVL----ESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (248)
Q Consensus       146 iD~li~~Ag~~~~~~~~----~~~~~~~~~~~~~~~~ll----~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (248)
                      +|+||||||........    +..++.++.|..++..++    +.+.+.+.++||++||...+.           +..+.
T Consensus        85 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~-----------~~~~~  153 (247)
T PRK12935         85 VDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQA-----------GGFGQ  153 (247)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcC-----------CCCCC
Confidence            99999999986443322    233444566666655544    444445567999999976542           22346


Q ss_pred             ChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          218 NPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      ..|+.||.+.+.+++.++.+   .++++++++|
T Consensus       154 ~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~p  186 (247)
T PRK12935        154 TNYSAAKAGMLGFTKSLALELAKTNVTVNAICP  186 (247)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHcCcEEEEEEe
Confidence            78999999999999999887   4899999998

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.91  E-value=6.8e-23  Score=169.46  Aligned_cols=162  Identities=17%  Similarity=0.194  Sum_probs=122.1

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      ++++||||+|+||++++++|+++|++|++++|+..+.+..   ...+.. +.++.++.+|++|.+++.+++++     ++
T Consensus         6 ~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~---~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   81 (251)
T PRK07231          6 KVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERV---AAEILA-GGRAIAVAADVSDEADVEAAVAAALERFGS   81 (251)
T ss_pred             cEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHH---HHHHhc-CCeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            8999999999999999999999999999999765332222   222221 34688999999999999888765     47


Q ss_pred             CCEEEEcccccccCC-CCC----CchhhHhhhHHH----HHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYVGE-STL----DPLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (248)
Q Consensus       146 iD~li~~Ag~~~~~~-~~~----~~~~~~~~~~~~----~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~  216 (248)
                      +|+||||||...... ..+    ..++.++.|+.+    +..+++.|.+.+.++||++||...+.           +.++
T Consensus        82 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~-----------~~~~  150 (251)
T PRK07231         82 VDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLR-----------PRPG  150 (251)
T ss_pred             CCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcC-----------CCCC
Confidence            999999999743221 111    223345555555    44466666667778999999977763           3445


Q ss_pred             CChHHHHHHHHHHHHHHHhhcC---CCcEEEEec
Q 025786          217 INPYGKAKKMAEDIILDFSKNS---DMAVLQCHR  247 (248)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~~~~~---gi~~~~v~P  247 (248)
                      ...|+.||.+.+.+++.++.++   ++++++++|
T Consensus       151 ~~~y~~sk~~~~~~~~~~a~~~~~~~i~v~~i~p  184 (251)
T PRK07231        151 LGWYNASKGAVITLTKALAAELGPDKIRVNAVAP  184 (251)
T ss_pred             chHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEE
Confidence            7789999999999999998773   899999998

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.91  E-value=8.8e-23  Score=170.52  Aligned_cols=160  Identities=15%  Similarity=0.124  Sum_probs=113.5

Q ss_pred             eEEEEecCCc--hhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----
Q 025786           71 THVLVTGGAG--YIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (248)
Q Consensus        71 k~vlITGasg--~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----  143 (248)
                      |+++||||++  |||+++++.|+++|++|++++|+.    ...+..+++....+.+.++.+|++|++++++++++     
T Consensus         7 k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~----~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (262)
T PRK07984          7 KRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND----KLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVW   82 (262)
T ss_pred             CEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecch----hHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhc
Confidence            8999999986  999999999999999999988642    11222233322223466789999999999988865     


Q ss_pred             CCCCEEEEcccccccCC-----CCCCchhhHh----hhHHH----HHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCC
Q 025786          144 NAFDAVMHFAAVAYVGE-----STLDPLKYYH----NITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITE  210 (248)
Q Consensus       144 ~~iD~li~~Ag~~~~~~-----~~~~~~~~~~----~~~~~----~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e  210 (248)
                      +++|+||||||+.....     ..+.+.+.|+    .|..+    ++.+++.+ +. .++||++||.+..          
T Consensus        83 g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~-~~-~g~Iv~iss~~~~----------  150 (262)
T PRK07984         83 PKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSML-NP-GSALLTLSYLGAE----------  150 (262)
T ss_pred             CCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHh-cC-CcEEEEEecCCCC----------
Confidence            67999999999753221     1122233333    33333    23344433 22 3689999986653          


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          211 ETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       211 ~~~~~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                       .+.+.+..|++||++.+.+++.++.+   +||++++|.|
T Consensus       151 -~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~P  189 (262)
T PRK07984        151 -RAIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISA  189 (262)
T ss_pred             -CCCCCcchhHHHHHHHHHHHHHHHHHhcccCcEEeeeec
Confidence             23344678999999999999999987   5899999998

>PRK07677 short chain dehydrogenase; Provisional

Probab=99.91  E-value=1.2e-22  Score=168.61  Aligned_cols=164  Identities=16%  Similarity=0.152  Sum_probs=119.2

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      |+++||||+||||+++++.|+++|++|++++|+....++..   +++...+.++.++++|++|++++++++++     ++
T Consensus         2 k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~---~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   78 (252)
T PRK07677          2 KVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAK---LEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGR   78 (252)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---HHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            79999999999999999999999999999987543222222   22222235788999999999999888865     57


Q ss_pred             CCEEEEcccccccCCCCCCc----hhhHhhhHHHHHHHH----HHHHHcC-CCEEEEeccceecCCCCCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYVGESTLDP----LKYYHNITSNTLVVL----ESMARHG-VDTLIYSSTCATYGEPEKMPITEETPQAP  216 (248)
Q Consensus       146 iD~li~~Ag~~~~~~~~~~~----~~~~~~~~~~~~~ll----~~~~~~~-~~~iV~~SS~~~~g~~~~~~~~e~~~~~~  216 (248)
                      +|+||||||.....+..+.+    +..++.|..++.+++    +.|.+.+ .++||++||...+.           +...
T Consensus        79 id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~-----------~~~~  147 (252)
T PRK07677         79 IDALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWD-----------AGPG  147 (252)
T ss_pred             ccEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhcc-----------CCCC
Confidence            99999999964332222222    334556666555544    4444433 47899999976542           2234


Q ss_pred             CChHHHHHHHHHHHHHHHhhc----CCCcEEEEecC
Q 025786          217 INPYGKAKKMAEDIILDFSKN----SDMAVLQCHRF  248 (248)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~~~~----~gi~~~~v~Pf  248 (248)
                      ..+|+.||++.+.+++.++.+    +|++++.++|.
T Consensus       148 ~~~Y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~PG  183 (252)
T PRK07677        148 VIHSAAAKAGVLAMTRTLAVEWGRKYGIRVNAIAPG  183 (252)
T ss_pred             CcchHHHHHHHHHHHHHHHHHhCcccCeEEEEEeec
Confidence            568999999999999998877    48999999983

>PRK07774 short chain dehydrogenase; Provisional

Probab=99.91  E-value=8.2e-23  Score=169.07  Aligned_cols=160  Identities=21%  Similarity=0.231  Sum_probs=118.8

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      |+++||||+||||++++++|+++|++|++++|.....+...   +++.....++.++.+|++|.+++++++++     ++
T Consensus         7 k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~---~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   83 (250)
T PRK07774          7 KVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVA---KQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFGG   83 (250)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---HHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            89999999999999999999999999999987533222222   22222234677899999999999887765     57


Q ss_pred             CCEEEEccccccc---CCCCC----CchhhHhhhHHHHHH----HHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYV---GESTL----DPLKYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQ  214 (248)
Q Consensus       146 iD~li~~Ag~~~~---~~~~~----~~~~~~~~~~~~~~~----ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~  214 (248)
                      +|+||||||....   ....+    ..+..++.|+.++.+    +++.+.+.+.++||++||.+.+.             
T Consensus        84 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~-------------  150 (250)
T PRK07774         84 IDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWL-------------  150 (250)
T ss_pred             CCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccccC-------------
Confidence            9999999997532   11111    222345566666555    45555555567999999977752             


Q ss_pred             CCCChHHHHHHHHHHHHHHHhhcC---CCcEEEEec
Q 025786          215 APINPYGKAKKMAEDIILDFSKNS---DMAVLQCHR  247 (248)
Q Consensus       215 ~~~~~Y~~sK~a~e~l~~~~~~~~---gi~~~~v~P  247 (248)
                       +.++|+.||++.+.+++++++++   |+++++++|
T Consensus       151 -~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~p  185 (250)
T PRK07774        151 -YSNFYGLAKVGLNGLTQQLARELGGMNIRVNAIAP  185 (250)
T ss_pred             -CccccHHHHHHHHHHHHHHHHHhCccCeEEEEEec
Confidence             25689999999999999999874   799999998

>PRK06125 short chain dehydrogenase; Provisional

Probab=99.91  E-value=1.7e-22  Score=168.29  Aligned_cols=164  Identities=15%  Similarity=0.093  Sum_probs=122.0

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-CCCCEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-NAFDAV  149 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-~~iD~l  149 (248)
                      |+++||||+++||+++++.|+++|++|++++|+..+.+...+.+...  .+.++.++.+|++|++++.++++. +++|++
T Consensus         8 k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~~D~~~~~~~~~~~~~~g~id~l   85 (259)
T PRK06125          8 KRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAA--HGVDVAVHALDLSSPEAREQLAAEAGDIDIL   85 (259)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhh--cCCceEEEEecCCCHHHHHHHHHHhCCCCEE
Confidence            89999999999999999999999999999987543322222222211  134678899999999999998876 689999


Q ss_pred             EEcccccccCCCCCCchhh----HhhhHHH----HHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCCChHH
Q 025786          150 MHFAAVAYVGESTLDPLKY----YHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYG  221 (248)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~----~~~~~~~----~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~  221 (248)
                      |||||........+.+.+.    +..|+.+    +..+++.|.+.+.++||++||....           .+......|+
T Consensus        86 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~-----------~~~~~~~~y~  154 (259)
T PRK06125         86 VNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIGAAGE-----------NPDADYICGS  154 (259)
T ss_pred             EECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCcccc-----------CCCCCchHhH
Confidence            9999976443333333333    3444444    3446777777666799999986543           2334466899


Q ss_pred             HHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          222 KAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       222 ~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      .+|++.+.++++++.+   .|++++.++|
T Consensus       155 ask~al~~~~~~la~e~~~~gi~v~~i~P  183 (259)
T PRK06125        155 AGNAALMAFTRALGGKSLDDGVRVVGVNP  183 (259)
T ss_pred             HHHHHHHHHHHHHHHHhCccCeEEEEEec
Confidence            9999999999999876   5899999998

>PRK05855 short chain dehydrogenase; Validated

Probab=99.90  E-value=6.8e-23  Score=188.66  Aligned_cols=163  Identities=17%  Similarity=0.187  Sum_probs=124.8

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      ++++||||+||||++++++|+++|++|++++|+..+.++..+.++   ..+.++.++.+|++|.+++.+++++     ++
T Consensus       316 ~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~---~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~  392 (582)
T PRK05855        316 KLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIR---AAGAVAHAYRVDVSDADAMEAFAEWVRAEHGV  392 (582)
T ss_pred             CEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH---hcCCeEEEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence            899999999999999999999999999999875433332222222   2244788999999999999888875     57


Q ss_pred             CCEEEEcccccccCCCCCCchhh----HhhhHHHHH----HHHHHHHHcC-CCEEEEeccceecCCCCCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYVGESTLDPLKY----YHNITSNTL----VVLESMARHG-VDTLIYSSTCATYGEPEKMPITEETPQAP  216 (248)
Q Consensus       146 iD~li~~Ag~~~~~~~~~~~~~~----~~~~~~~~~----~ll~~~~~~~-~~~iV~~SS~~~~g~~~~~~~~e~~~~~~  216 (248)
                      +|+||||||+.......+.+.+.    ++.|..+..    .+++.|.+++ .++||++||.+++.           +.++
T Consensus       393 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~-----------~~~~  461 (582)
T PRK05855        393 PDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYA-----------PSRS  461 (582)
T ss_pred             CcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhcc-----------CCCC
Confidence            99999999986554433333333    345555433    4666677665 47999999988874           3345


Q ss_pred             CChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          217 INPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      ...|+.||++.+.+++.++.+   +||++++|+|
T Consensus       462 ~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~P  495 (582)
T PRK05855        462 LPAYATSKAAVLMLSECLRAELAAAGIGVTAICP  495 (582)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEe
Confidence            779999999999999999877   5899999998

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=99.90  E-value=2.2e-22  Score=167.31  Aligned_cols=164  Identities=13%  Similarity=0.131  Sum_probs=120.8

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~  144 (248)
                      +|+|+||||+++||++++++|+++|++|++++|.....+...+.++   ..+.++.++.+|++|.+++.++++.     +
T Consensus        11 ~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~---~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   87 (255)
T PRK06113         11 GKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQ---QLGGQAFACRCDITSEQELSALADFALSKLG   87 (255)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHH---hcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            3999999999999999999999999999998865433222222222   2234688899999999999887764     5


Q ss_pred             CCCEEEEcccccccCCCCCC---chhhHhhhHHHHHHHH----HHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCC
Q 025786          145 AFDAVMHFAAVAYVGESTLD---PLKYYHNITSNTLVVL----ESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (248)
Q Consensus       145 ~iD~li~~Ag~~~~~~~~~~---~~~~~~~~~~~~~~ll----~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (248)
                      ++|+||||||.......+.+   .+..+..|+.+...++    +.|.+.+.++||++||....           .+..+.
T Consensus        88 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~-----------~~~~~~  156 (255)
T PRK06113         88 KVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAE-----------NKNINM  156 (255)
T ss_pred             CCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEeccccc-----------CCCCCc
Confidence            79999999997543333222   2223556666655544    44445556799999997654           233456


Q ss_pred             ChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          218 NPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      ..|+.||++.+.+++.++.+   .|+++++++|
T Consensus       157 ~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~p  189 (255)
T PRK06113        157 TSYASSKAAASHLVRNMAFDLGEKNIRVNGIAP  189 (255)
T ss_pred             chhHHHHHHHHHHHHHHHHHhhhhCeEEEEEec
Confidence            78999999999999999876   5799999998

>PRK07102 short chain dehydrogenase; Provisional

Probab=99.90  E-value=1.4e-22  Score=167.25  Aligned_cols=166  Identities=15%  Similarity=0.115  Sum_probs=120.8

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc--CCCC
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE--NAFD  147 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~~iD  147 (248)
                      ||+++||||+||||.++++.|+++|++|++++|+..+.+...+.+...  ...++.++++|++|++++++++++  .++|
T Consensus         1 ~~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~d   78 (243)
T PRK07102          1 MKKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRAR--GAVAVSTHELDILDTASHAAFLDSLPALPD   78 (243)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHh--cCCeEEEEecCCCChHHHHHHHHHHhhcCC
Confidence            589999999999999999999999999999997543322222222211  134788999999999999888875  3589


Q ss_pred             EEEEcccccccCCCCCCc----hhhHhhhHHHHHH----HHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCCCh
Q 025786          148 AVMHFAAVAYVGESTLDP----LKYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINP  219 (248)
Q Consensus       148 ~li~~Ag~~~~~~~~~~~----~~~~~~~~~~~~~----ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~  219 (248)
                      ++|||||........+..    .+.++.|+.++..    +++.|.+.+.++||++||.....           +.+....
T Consensus        79 ~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~-----------~~~~~~~  147 (243)
T PRK07102         79 IVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDR-----------GRASNYV  147 (243)
T ss_pred             EEEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccccC-----------CCCCCcc
Confidence            999999975443322222    2334555555444    44556566678999999965431           2233568


Q ss_pred             HHHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          220 YGKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       220 Y~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                      |+.||++.+++++.++.+   .|+++++++|.
T Consensus       148 Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg  179 (243)
T PRK07102        148 YGSAKAALTAFLSGLRNRLFKSGVHVLTVKPG  179 (243)
T ss_pred             cHHHHHHHHHHHHHHHHHhhccCcEEEEEecC
Confidence            999999999999999765   58999999984

>PRK08628 short chain dehydrogenase; Provisional

Probab=99.90  E-value=1.5e-22  Score=168.38  Aligned_cols=162  Identities=19%  Similarity=0.185  Sum_probs=118.8

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      ++++||||+|+||++++++|+++|++|++++|+....    +..+++.....++.++.+|+++.+++.+++++     ++
T Consensus         8 ~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~----~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   83 (258)
T PRK08628          8 KVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD----EFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGR   83 (258)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH----HHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence            8999999999999999999999999999988754332    22233322345688999999999999888875     57


Q ss_pred             CCEEEEcccccccCCCCCCc---hhhHhhhHHHHHHH----HHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYVGESTLDP---LKYYHNITSNTLVV----LESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPIN  218 (248)
Q Consensus       146 iD~li~~Ag~~~~~~~~~~~---~~~~~~~~~~~~~l----l~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~  218 (248)
                      +|+||||||...........   +..++.|..+...+    ++.+.+. .++||++||...+.           +.++..
T Consensus        84 id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~iv~~ss~~~~~-----------~~~~~~  151 (258)
T PRK08628         84 IDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKAS-RGAIVNISSKTALT-----------GQGGTS  151 (258)
T ss_pred             CCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhcc-CcEEEEECCHHhcc-----------CCCCCc
Confidence            99999999975433222222   22344444444443    4444333 47899999976652           234567


Q ss_pred             hHHHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          219 PYGKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       219 ~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                      .|+.||++++.+++.++.+   .+++++.|+|.
T Consensus       152 ~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~pg  184 (258)
T PRK08628        152 GYAAAKGAQLALTREWAVALAKDGVRVNAVIPA  184 (258)
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecC
Confidence            8999999999999999875   58999999983

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.90  E-value=1.3e-22  Score=169.22  Aligned_cols=160  Identities=18%  Similarity=0.123  Sum_probs=112.6

Q ss_pred             eEEEEecCCc--hhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----
Q 025786           71 THVLVTGGAG--YIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (248)
Q Consensus        71 k~vlITGasg--~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----  143 (248)
                      |+++||||++  |||++++++|+++|++|++++|+..    ..+.++++....+...++++|++|++++++++++     
T Consensus         9 k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~----~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~   84 (260)
T PRK06603          9 KKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEV----LEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKW   84 (260)
T ss_pred             cEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchH----HHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHc
Confidence            8999999997  9999999999999999999876421    1122222211112234678999999999988875     


Q ss_pred             CCCCEEEEccccccc----CCCCCCchhhHh----hhHHHH----HHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCC
Q 025786          144 NAFDAVMHFAAVAYV----GESTLDPLKYYH----NITSNT----LVVLESMARHGVDTLIYSSTCATYGEPEKMPITEE  211 (248)
Q Consensus       144 ~~iD~li~~Ag~~~~----~~~~~~~~~~~~----~~~~~~----~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~  211 (248)
                      +++|+||||||....    .+..+.+.+.|+    .|..+.    +.+++.|.+  .++||++||.+..           
T Consensus        85 g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~--~G~Iv~isS~~~~-----------  151 (260)
T PRK06603         85 GSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHD--GGSIVTLTYYGAE-----------  151 (260)
T ss_pred             CCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhcc--CceEEEEecCccc-----------
Confidence            689999999997532    122232333333    333332    234455543  3699999996553           


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          212 TPQAPINPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       212 ~~~~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      .+.+....|+.||++.+.+++.++.|   +||++++|+|
T Consensus       152 ~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~P  190 (260)
T PRK06603        152 KVIPNYNVMGVAKAALEASVKYLANDMGENNIRVNAISA  190 (260)
T ss_pred             cCCCcccchhhHHHHHHHHHHHHHHHhhhcCeEEEEEec
Confidence            12334678999999999999999987   5799999998

>PRK06701 short chain dehydrogenase; Provisional

Probab=99.90  E-value=3.2e-22  Score=169.57  Aligned_cols=166  Identities=17%  Similarity=0.141  Sum_probs=121.2

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~  144 (248)
                      +|++|||||+|+||++++++|+++|++|++++|....  ........+...+.++.++.+|++|.+++.+++++     +
T Consensus        46 ~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~--~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~~  123 (290)
T PRK06701         46 GKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHE--DANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRELG  123 (290)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcch--HHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            4899999999999999999999999999999875322  11222222222244688899999999999888865     5


Q ss_pred             CCCEEEEccccccc-CCCCCC----chhhHhhhHHHHHHHHHHHHHc--CCCEEEEeccceecCCCCCCCCCCCCCCCCC
Q 025786          145 AFDAVMHFAAVAYV-GESTLD----PLKYYHNITSNTLVVLESMARH--GVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (248)
Q Consensus       145 ~iD~li~~Ag~~~~-~~~~~~----~~~~~~~~~~~~~~ll~~~~~~--~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (248)
                      ++|+||||||.... ....+.    ....++.|..+...++..+.+.  ..++||++||..++..           .+..
T Consensus       124 ~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~~~~-----------~~~~  192 (290)
T PRK06701        124 RLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSITGYEG-----------NETL  192 (290)
T ss_pred             CCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecccccCC-----------CCCc
Confidence            79999999997532 222222    2334556666666665555431  2368999999887632           2235


Q ss_pred             ChHHHHHHHHHHHHHHHhhcC---CCcEEEEecC
Q 025786          218 NPYGKAKKMAEDIILDFSKNS---DMAVLQCHRF  248 (248)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~~~~~---gi~~~~v~Pf  248 (248)
                      ..|+.||++.+.++++++.++   |++++.++|.
T Consensus       193 ~~Y~~sK~a~~~l~~~la~~~~~~gIrv~~i~pG  226 (290)
T PRK06701        193 IDYSATKGAIHAFTRSLAQSLVQKGIRVNAVAPG  226 (290)
T ss_pred             chhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecC
Confidence            679999999999999999884   8999999984

>PRK09242 tropinone reductase; Provisional

Probab=99.90  E-value=2.1e-22  Score=167.55  Aligned_cols=166  Identities=14%  Similarity=0.118  Sum_probs=122.5

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      |+++||||+|+||+++++.|+++|++|++++|+....++..+.+.... .+.++.++.+|+++.+++++++++     ++
T Consensus        10 k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~   88 (257)
T PRK09242         10 QTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEF-PEREVHGLAADVSDDEDRRAILDWVEDHWDG   88 (257)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhC-CCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            899999999999999999999999999999875433222222222211 134788899999999998887765     68


Q ss_pred             CCEEEEcccccccCCCCCC----chhhHhhhHHHHHH----HHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYVGESTLD----PLKYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (248)
Q Consensus       146 iD~li~~Ag~~~~~~~~~~----~~~~~~~~~~~~~~----ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (248)
                      +|+||||||.....+..+.    .+..+..|+.+...    +++.|++++.++||++||.+.+.           +..+.
T Consensus        89 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~-----------~~~~~  157 (257)
T PRK09242         89 LHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLT-----------HVRSG  157 (257)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccCC-----------CCCCC
Confidence            9999999997533222222    22334455555444    56666666678999999977653           23446


Q ss_pred             ChHHHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          218 NPYGKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                      ..|+.||.+.+.+++.++.+   .|++++.++|.
T Consensus       158 ~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg  191 (257)
T PRK09242        158 APYGMTKAALLQMTRNLAVEWAEDGIRVNAVAPW  191 (257)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHhCeEEEEEEEC
Confidence            78999999999999999877   48999999984

>PRK12827 short chain dehydrogenase; Provisional

Probab=99.90  E-value=1.5e-22  Score=167.14  Aligned_cols=167  Identities=16%  Similarity=0.110  Sum_probs=124.2

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcch-hhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIG-AVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~  144 (248)
                      |+++||||+|+||++++++|+++|++|++++|...+..+ ..+...++...+.++.++.+|++|.+++++++++     +
T Consensus         7 ~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   86 (249)
T PRK12827          7 RRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGVEEFG   86 (249)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            899999999999999999999999999998765433322 2222223322345788999999999999888764     5


Q ss_pred             CCCEEEEcccccccCCCCCCc----hhhHhhhHHHHHHHHHHHH-----HcCCCEEEEeccceecCCCCCCCCCCCCCCC
Q 025786          145 AFDAVMHFAAVAYVGESTLDP----LKYYHNITSNTLVVLESMA-----RHGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (248)
Q Consensus       145 ~iD~li~~Ag~~~~~~~~~~~----~~~~~~~~~~~~~ll~~~~-----~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~  215 (248)
                      ++|+||||||........+..    ...+..|..+...+++.+.     +.+.++||++||...+.           +..
T Consensus        87 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~-----------~~~  155 (249)
T PRK12827         87 RLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVR-----------GNR  155 (249)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhcC-----------CCC
Confidence            799999999976543322222    3344566666666666555     45567999999977653           233


Q ss_pred             CCChHHHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          216 PINPYGKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                      +...|+.+|++.+.+++.++.+   .++++++++|.
T Consensus       156 ~~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg  191 (249)
T PRK12827        156 GQVNYAASKAGLIGLTKTLANELAPRGITVNAVAPG  191 (249)
T ss_pred             CCchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEEEC
Confidence            4678999999999999999887   48999999984

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=99.90  E-value=1.2e-22  Score=171.61  Aligned_cols=148  Identities=26%  Similarity=0.322  Sum_probs=126.0

Q ss_pred             EEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEEE
Q 025786           72 HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVMH  151 (248)
Q Consensus        72 ~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li~  151 (248)
                      +|+||||||+||++++++|+++|++|++++|.                        .+|+.+.+++.++++..++|+|||
T Consensus         1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~------------------------~~d~~~~~~~~~~~~~~~~d~vi~   56 (287)
T TIGR01214         1 RILITGANGQLGRELVQQLSPEGRVVVALTSS------------------------QLDLTDPEALERLLRAIRPDAVVN   56 (287)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc------------------------ccCCCCHHHHHHHHHhCCCCEEEE
Confidence            48999999999999999999999999988751                        479999999999998767899999


Q ss_pred             cccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCCChHHHHHHHHHHHH
Q 025786          152 FAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDII  231 (248)
Q Consensus       152 ~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e~l~  231 (248)
                      +|+..........+...++.|..++.++++.+.+.+. ++|++||..+|+.....+++|+.+..+.+.|+.+|.++|.++
T Consensus        57 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~~K~~~E~~~  135 (287)
T TIGR01214        57 TAAYTDVDGAESDPEKAFAVNALAPQNLARAAARHGA-RLVHISTDYVFDGEGKRPYREDDATNPLNVYGQSKLAGEQAI  135 (287)
T ss_pred             CCccccccccccCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEeeeeeecCCCCCCCCCCCCCCCcchhhHHHHHHHHHH
Confidence            9997543333344566788888999999999988764 899999999998766677889888888899999999999999


Q ss_pred             HHHhhcCCCcEEEEecC
Q 025786          232 LDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       232 ~~~~~~~gi~~~~v~Pf  248 (248)
                      +.+    +.+++++||.
T Consensus       136 ~~~----~~~~~ilR~~  148 (287)
T TIGR01214       136 RAA----GPNALIVRTS  148 (287)
T ss_pred             HHh----CCCeEEEEee
Confidence            875    6789999984

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.90  E-value=1.2e-22  Score=168.60  Aligned_cols=165  Identities=17%  Similarity=0.123  Sum_probs=119.9

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      |+++||||+||||++++++|+++|++|++++|....  ...+..+.+.....++.++.+|++|++++.+++++     ++
T Consensus         3 k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (256)
T PRK12745          3 PVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDE--ELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGR   80 (256)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchh--HHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence            789999999999999999999999999999864322  22222222222234688999999999998887765     57


Q ss_pred             CCEEEEcccccccC--CCC----CCchhhHhhhHHHHHHHH----HHHHHcC------CCEEEEeccceecCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYVG--EST----LDPLKYYHNITSNTLVVL----ESMARHG------VDTLIYSSTCATYGEPEKMPIT  209 (248)
Q Consensus       146 iD~li~~Ag~~~~~--~~~----~~~~~~~~~~~~~~~~ll----~~~~~~~------~~~iV~~SS~~~~g~~~~~~~~  209 (248)
                      +|+||||||.....  ...    +..++.++.|..++..++    +.|.+..      .++||++||...+.        
T Consensus        81 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~--------  152 (256)
T PRK12745         81 IDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIM--------  152 (256)
T ss_pred             CCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhcc--------
Confidence            99999999975321  111    223334556666665554    4444332      35799999976642        


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          210 EETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       210 e~~~~~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                         +..+.+.|+.||++.+.+++.++.+   +|+++++++|.
T Consensus       153 ---~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg  191 (256)
T PRK12745        153 ---VSPNRGEYCISKAGLSMAAQLFAARLAEEGIGVYEVRPG  191 (256)
T ss_pred             ---CCCCCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEecC
Confidence               2334678999999999999999976   68999999984

>PRK07814 short chain dehydrogenase; Provisional

Probab=99.90  E-value=2.2e-22  Score=168.14  Aligned_cols=164  Identities=15%  Similarity=0.095  Sum_probs=121.1

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~  144 (248)
                      +++++||||+||||++++++|+++|++|++++|+..+.   .+..+++...+.++.++.+|+++++++.+++++     +
T Consensus        10 ~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~---~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   86 (263)
T PRK07814         10 DQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQL---DEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFG   86 (263)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH---HHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            38999999999999999999999999999999754332   222222222245688899999999999887765     5


Q ss_pred             CCCEEEEcccccccCCCCCC----chhhHhhhHHHHHHHHHHH----HH-cCCCEEEEeccceecCCCCCCCCCCCCCCC
Q 025786          145 AFDAVMHFAAVAYVGESTLD----PLKYYHNITSNTLVVLESM----AR-HGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (248)
Q Consensus       145 ~iD~li~~Ag~~~~~~~~~~----~~~~~~~~~~~~~~ll~~~----~~-~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~  215 (248)
                      ++|+||||||........+.    .+..+..|..++..+.+.+    .+ .+.++||++||....           .+.+
T Consensus        87 ~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~-----------~~~~  155 (263)
T PRK07814         87 RLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGR-----------LAGR  155 (263)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEcccccc-----------CCCC
Confidence            89999999997544332222    3334556666666655554    33 456799999996554           2334


Q ss_pred             CCChHHHHHHHHHHHHHHHhhcC--CCcEEEEec
Q 025786          216 PINPYGKAKKMAEDIILDFSKNS--DMAVLQCHR  247 (248)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~~~~~--gi~~~~v~P  247 (248)
                      +...|+.||++++.+++.++.++  +++++.++|
T Consensus       156 ~~~~Y~~sK~a~~~~~~~~~~e~~~~i~v~~i~P  189 (263)
T PRK07814        156 GFAAYGTAKAALAHYTRLAALDLCPRIRVNAIAP  189 (263)
T ss_pred             CCchhHHHHHHHHHHHHHHHHHHCCCceEEEEEe
Confidence            57789999999999999999874  578888887

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=99.90  E-value=3.3e-22  Score=166.17  Aligned_cols=164  Identities=16%  Similarity=0.106  Sum_probs=122.4

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~  144 (248)
                      +|+++||||+|+||++++++|+++|++|++++|+...   +.+..+++...+.++.++.+|++|++++.+++++     +
T Consensus        11 ~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~---~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   87 (256)
T PRK06124         11 GQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAAT---LEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEHG   87 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHH---HHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcC
Confidence            3999999999999999999999999999999975432   2222232322345688999999999999888765     5


Q ss_pred             CCCEEEEcccccccCCCCCCch----hhHhhhHHHHHH----HHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCC
Q 025786          145 AFDAVMHFAAVAYVGESTLDPL----KYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (248)
Q Consensus       145 ~iD~li~~Ag~~~~~~~~~~~~----~~~~~~~~~~~~----ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~  216 (248)
                      ++|+||||||........+.+.    ..+..|..++..    +++.|.+.+.++||++||..++.           +.+.
T Consensus        88 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~-----------~~~~  156 (256)
T PRK06124         88 RLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQV-----------ARAG  156 (256)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhcc-----------CCCC
Confidence            7999999999754433322222    334555555444    44666666778999999976542           2334


Q ss_pred             CChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          217 INPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      ..+|+.||++.+.+++.++.+   .+++++.++|
T Consensus       157 ~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~p  190 (256)
T PRK06124        157 DAVYPAAKQGLTGLMRALAAEFGPHGITSNAIAP  190 (256)
T ss_pred             ccHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEE
Confidence            678999999999999999877   4799999998

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=99.90  E-value=3.3e-22  Score=164.79  Aligned_cols=165  Identities=18%  Similarity=0.130  Sum_probs=122.4

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      |+++||||+|+||+++++.|+++|++|++++|...  +...+........+.++.++.+|++|.+++.+++++     ++
T Consensus         3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~   80 (245)
T PRK12824          3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGN--DCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGP   80 (245)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcH--HHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            68999999999999999999999999999987532  222222222222245688999999999999888765     57


Q ss_pred             CCEEEEcccccccCCCCCCchh----hHhhhHHHHHH----HHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYVGESTLDPLK----YYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (248)
Q Consensus       146 iD~li~~Ag~~~~~~~~~~~~~----~~~~~~~~~~~----ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (248)
                      +|+||||||........+.+.+    .++.|..+...    +++.+.+.+.++||++||...+.           +.+..
T Consensus        81 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~-----------~~~~~  149 (245)
T PRK12824         81 VDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGLK-----------GQFGQ  149 (245)
T ss_pred             CCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhcc-----------CCCCC
Confidence            9999999997644333222233    34455555444    57777777778999999977663           22345


Q ss_pred             ChHHHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          218 NPYGKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                      ..|+.||++.+++++.++.+   .|+++++++|.
T Consensus       150 ~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg  183 (245)
T PRK12824        150 TNYSAAKAGMIGFTKALASEGARYGITVNCIAPG  183 (245)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEEc
Confidence            68999999999999999875   58999999984

>PRK07576 short chain dehydrogenase; Provisional

Probab=99.90  E-value=3.1e-22  Score=167.37  Aligned_cols=162  Identities=17%  Similarity=0.094  Sum_probs=118.4

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      ++++||||+|+||++++++|+++|++|++++|+....   .+..+++.....++.++.+|++|++++.+++++     ++
T Consensus        10 k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~---~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~~   86 (264)
T PRK07576         10 KNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKV---DAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFGP   86 (264)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHH---HHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            8999999999999999999999999999998754322   222222222234577899999999999888875     57


Q ss_pred             CCEEEEcccccccCCCCCCch----hhHhhhHHHHHHHH----HHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYVGESTLDPL----KYYHNITSNTLVVL----ESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (248)
Q Consensus       146 iD~li~~Ag~~~~~~~~~~~~----~~~~~~~~~~~~ll----~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (248)
                      +|+||||||........+...    ..++.|..++.+++    +.+.+. .++||++||...+.           +.+..
T Consensus        87 iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~-~g~iv~iss~~~~~-----------~~~~~  154 (264)
T PRK07576         87 IDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRP-GASIIQISAPQAFV-----------PMPMQ  154 (264)
T ss_pred             CCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCEEEEECChhhcc-----------CCCCc
Confidence            999999998653333222222    33446666655544    444434 36999999976542           33456


Q ss_pred             ChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          218 NPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      ..|+.||++.+.+++.++.+   .|++++.++|
T Consensus       155 ~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~p  187 (264)
T PRK07576        155 AHVCAAKAGVDMLTRTLALEWGPEGIRVNSIVP  187 (264)
T ss_pred             cHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEec
Confidence            78999999999999999887   4799999998

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=99.90  E-value=2.4e-22  Score=166.16  Aligned_cols=164  Identities=17%  Similarity=0.185  Sum_probs=122.6

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      +++|||||+|+||++++++|+++|++|++++|+....+...   +++...+.++.++++|++|.++++++++.     ++
T Consensus         4 ~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~---~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~   80 (250)
T TIGR03206         4 KTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVA---ADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGP   80 (250)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHH---HHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            89999999999999999999999999999886543322222   22222245688999999999999888764     57


Q ss_pred             CCEEEEcccccccCCCCCCc----hhhHhhhHHHHHH----HHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYVGESTLDP----LKYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (248)
Q Consensus       146 iD~li~~Ag~~~~~~~~~~~----~~~~~~~~~~~~~----ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (248)
                      +|++|||||........+.+    +..++.|+.+...    +++.|++.+.++||++||.+.+..           .+..
T Consensus        81 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~~-----------~~~~  149 (250)
T TIGR03206        81 VDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARVG-----------SSGE  149 (250)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhccC-----------CCCC
Confidence            99999999975433322222    2335566666555    455555666789999999877642           2335


Q ss_pred             ChHHHHHHHHHHHHHHHhhcC---CCcEEEEecC
Q 025786          218 NPYGKAKKMAEDIILDFSKNS---DMAVLQCHRF  248 (248)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~~~~~---gi~~~~v~Pf  248 (248)
                      ..|+.+|++.+.+++.++.+.   ++++++++|.
T Consensus       150 ~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg  183 (250)
T TIGR03206       150 AVYAACKGGLVAFSKTMAREHARHGITVNVVCPG  183 (250)
T ss_pred             chHHHHHHHHHHHHHHHHHHHhHhCcEEEEEecC
Confidence            689999999999999999884   8999999983

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=99.90  E-value=1.8e-22  Score=168.80  Aligned_cols=154  Identities=18%  Similarity=0.193  Sum_probs=116.7

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      |+++||||+||||+++++.|+++|++|+++++......            ..++.++.+|++|++++++++++     ++
T Consensus        10 k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~------------~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   77 (266)
T PRK06171         10 KIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQ------------HENYQFVPTDVSSAEEVNHTVAEIIEKFGR   77 (266)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccc------------cCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            89999999999999999999999999999986443211            23577899999999999888775     67


Q ss_pred             CCEEEEcccccccCCC---------CCCchh----hHhhhHHHHHH----HHHHHHHcCCCEEEEeccceecCCCCCCCC
Q 025786          146 FDAVMHFAAVAYVGES---------TLDPLK----YYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPI  208 (248)
Q Consensus       146 iD~li~~Ag~~~~~~~---------~~~~~~----~~~~~~~~~~~----ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~  208 (248)
                      +|+||||||.......         .+.+.+    .++.|+.++..    +++.|.+.+.++||++||...+.       
T Consensus        78 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~-------  150 (266)
T PRK06171         78 IDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLE-------  150 (266)
T ss_pred             CCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccccC-------
Confidence            9999999997532211         112222    34455555444    45556566667999999977652       


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          209 TEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       209 ~e~~~~~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                          +.+....|+.||++.+.+++.++.+   +|+++++|+|
T Consensus       151 ----~~~~~~~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~p  188 (266)
T PRK06171        151 ----GSEGQSCYAATKAALNSFTRSWAKELGKHNIRVVGVAP  188 (266)
T ss_pred             ----CCCCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEec
Confidence                2334678999999999999999987   5899999998

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.90  E-value=1.7e-22  Score=167.31  Aligned_cols=161  Identities=20%  Similarity=0.240  Sum_probs=116.0

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      |+++||||+||||+++++.|+++|++|+++++.  +.+...+...+.   +.++.++++|++|++++.+++++     ++
T Consensus         6 k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~--~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   80 (253)
T PRK08642          6 QTVLVTGGSRGLGAAIARAFAREGARVVVNYHQ--SEDAAEALADEL---GDRAIALQADVTDREQVQAMFATATEHFGK   80 (253)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCC--CHHHHHHHHHHh---CCceEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            899999999999999999999999999887642  222222222222   24688899999999999888875     34


Q ss_pred             -CCEEEEccccccc------CCCCCC----chhhHhhhHHHHHH----HHHHHHHcCCCEEEEeccceecCCCCCCCCCC
Q 025786          146 -FDAVMHFAAVAYV------GESTLD----PLKYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITE  210 (248)
Q Consensus       146 -iD~li~~Ag~~~~------~~~~~~----~~~~~~~~~~~~~~----ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e  210 (248)
                       +|++|||||....      ....+.    ..+.++.|..++..    +++.+.+.+.++||++||....          
T Consensus        81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~----------  150 (253)
T PRK08642         81 PITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLFQ----------  150 (253)
T ss_pred             CCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCcccc----------
Confidence             9999999986321      111111    22335556655444    4444555566799999985443          


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          211 ETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       211 ~~~~~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                       .+..+..+|+.||++.+++++.++++   .|++++.++|
T Consensus       151 -~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~p  189 (253)
T PRK08642        151 -NPVVPYHDYTTAKAALLGLTRNLAAELGPYGITVNMVSG  189 (253)
T ss_pred             -CCCCCccchHHHHHHHHHHHHHHHHHhCccCeEEEEEee
Confidence             23445678999999999999999987   5799999988

>PRK08251 short chain dehydrogenase; Provisional

Probab=99.90  E-value=3.3e-22  Score=165.33  Aligned_cols=167  Identities=13%  Similarity=0.100  Sum_probs=121.1

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      |+++||||+||||++++++|+++|++|++++|+..+.++..+.+.+. ..+.++.++++|++|.+++.+++++     ++
T Consensus         3 k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   81 (248)
T PRK08251          3 QKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLAR-YPGIKVAVAALDVNDHDQVFEVFAEFRDELGG   81 (248)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhh-CCCceEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            78999999999999999999999999999987543322222222221 1134688899999999999888775     57


Q ss_pred             CCEEEEcccccccCCCCCCc----hhhHhhhHHHHHH----HHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYVGESTLDP----LKYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (248)
Q Consensus       146 iD~li~~Ag~~~~~~~~~~~----~~~~~~~~~~~~~----ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (248)
                      +|++|||||+.........+    +..++.|..+...    +++.+++.+.++||++||......          ...+.
T Consensus        82 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~----------~~~~~  151 (248)
T PRK08251         82 LDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAVRG----------LPGVK  151 (248)
T ss_pred             CCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccC----------CCCCc
Confidence            99999999986543322222    2344566655444    445566667789999999765421          11235


Q ss_pred             ChHHHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          218 NPYGKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                      ..|+.||++.+.+++.++.+   .++++++++|.
T Consensus       152 ~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg  185 (248)
T PRK08251        152 AAYAASKAGVASLGEGLRAELAKTPIKVSTIEPG  185 (248)
T ss_pred             ccHHHHHHHHHHHHHHHHHHhcccCcEEEEEecC
Confidence            78999999999999999877   47999999983

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.90  E-value=1.3e-22  Score=170.49  Aligned_cols=160  Identities=14%  Similarity=0.060  Sum_probs=113.6

Q ss_pred             eEEEEecCC--chhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----
Q 025786           71 THVLVTGGA--GYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (248)
Q Consensus        71 k~vlITGas--g~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----  143 (248)
                      |+++||||+  +|||+++|++|+++|++|++++|..+..+...+..+++    +...++++|++|++++++++++     
T Consensus        11 k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~----~~~~~~~~Dl~~~~~v~~~~~~~~~~~   86 (272)
T PRK08159         11 KRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAEL----GAFVAGHCDVTDEASIDAVFETLEKKW   86 (272)
T ss_pred             CEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhc----CCceEEecCCCCHHHHHHHHHHHHHhc
Confidence            899999997  89999999999999999998876422112222222222    2355789999999999988875     


Q ss_pred             CCCCEEEEccccccc----CCCCCCchh----hHhhhHHHHHHH----HHHHHHcCCCEEEEeccceecCCCCCCCCCCC
Q 025786          144 NAFDAVMHFAAVAYV----GESTLDPLK----YYHNITSNTLVV----LESMARHGVDTLIYSSTCATYGEPEKMPITEE  211 (248)
Q Consensus       144 ~~iD~li~~Ag~~~~----~~~~~~~~~----~~~~~~~~~~~l----l~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~  211 (248)
                      +++|+||||||+...    .+..+.+.+    .++.|+.+...+    ++.|.  +.++||++||.+..           
T Consensus        87 g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~--~~g~Iv~iss~~~~-----------  153 (272)
T PRK08159         87 GKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMT--DGGSILTLTYYGAE-----------  153 (272)
T ss_pred             CCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcC--CCceEEEEeccccc-----------
Confidence            689999999997542    122222222    334444444443    44443  23799999986543           


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          212 TPQAPINPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       212 ~~~~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      .+.+....|+.||++.+.++++++.+   +||++++|+|
T Consensus       154 ~~~p~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~P  192 (272)
T PRK08159        154 KVMPHYNVMGVAKAALEASVKYLAVDLGPKNIRVNAISA  192 (272)
T ss_pred             cCCCcchhhhhHHHHHHHHHHHHHHHhcccCeEEEEeec
Confidence            23344678999999999999999988   5799999998

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.90  E-value=1.6e-22  Score=168.71  Aligned_cols=160  Identities=13%  Similarity=0.088  Sum_probs=114.2

Q ss_pred             eEEEEecC--CchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----
Q 025786           71 THVLVTGG--AGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (248)
Q Consensus        71 k~vlITGa--sg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----  143 (248)
                      |+++||||  ++|||++++++|+++|++|++++|..+..+.+.+..++.    +...++++|++|++++++++++     
T Consensus         7 k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~----~~~~~~~~Dv~d~~~v~~~~~~~~~~~   82 (260)
T PRK06997          7 KRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEF----GSDLVFPCDVASDEQIDALFASLGQHW   82 (260)
T ss_pred             cEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhc----CCcceeeccCCCHHHHHHHHHHHHHHh
Confidence            89999996  689999999999999999999875433222222222222    2234689999999999988875     


Q ss_pred             CCCCEEEEcccccccC----C-CCCCchhhH----hhhHHH----HHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCC
Q 025786          144 NAFDAVMHFAAVAYVG----E-STLDPLKYY----HNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITE  210 (248)
Q Consensus       144 ~~iD~li~~Ag~~~~~----~-~~~~~~~~~----~~~~~~----~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e  210 (248)
                      +++|++|||||.....    + ..+.+.+.|    +.|+.+    ++.++|.|.  +.++||++||.+..          
T Consensus        83 g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~--~~g~Ii~iss~~~~----------  150 (260)
T PRK06997         83 DGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLS--DDASLLTLSYLGAE----------  150 (260)
T ss_pred             CCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcC--CCceEEEEeccccc----------
Confidence            6899999999975321    1 112222333    344444    344666663  23689999996653          


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          211 ETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       211 ~~~~~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                       .+.+....|+.||++.+.+++.++.+   +|++++.|.|
T Consensus       151 -~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~P  189 (260)
T PRK06997        151 -RVVPNYNTMGLAKASLEASVRYLAVSLGPKGIRANGISA  189 (260)
T ss_pred             -cCCCCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEee
Confidence             23344668999999999999999987   5899999998

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=99.90  E-value=3.7e-22  Score=166.22  Aligned_cols=167  Identities=17%  Similarity=0.181  Sum_probs=121.8

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      |++|||||+|+||+++++.|+++|++|++++|+..+.+   ...+.+...+.++.++++|++|.+++++++++     ++
T Consensus        13 k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~---~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~~   89 (259)
T PRK08213         13 KTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELE---EAAAHLEALGIDALWIAADVADEADIERLAEETLERFGH   89 (259)
T ss_pred             CEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHH---HHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            89999999999999999999999999999987543222   22222222244678899999999999777764     57


Q ss_pred             CCEEEEcccccccCCCCCCch----hhHhhhHHHHHHHHHHHH-----HcCCCEEEEeccceecCCCCCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYVGESTLDPL----KYYHNITSNTLVVLESMA-----RHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (248)
Q Consensus       146 iD~li~~Ag~~~~~~~~~~~~----~~~~~~~~~~~~ll~~~~-----~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~  216 (248)
                      +|+||||||........+.+.    +.++.|..++..+++.+.     +++.++||++||...+.....       ...+
T Consensus        90 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~~~-------~~~~  162 (259)
T PRK08213         90 VDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPP-------EVMD  162 (259)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCc-------cccC
Confidence            999999999754333333333    344566666666666543     335679999999766532111       1134


Q ss_pred             CChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          217 INPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      ..+|+.+|++.+.++++++.+   +|+++++++|
T Consensus       163 ~~~Y~~sKa~~~~~~~~~a~~~~~~gi~v~~v~P  196 (259)
T PRK08213        163 TIAYNTSKGAVINFTRALAAEWGPHGIRVNAIAP  196 (259)
T ss_pred             cchHHHHHHHHHHHHHHHHHHhcccCEEEEEEec
Confidence            578999999999999999887   4799999998

>PRK07856 short chain dehydrogenase; Provisional

Probab=99.90  E-value=3.8e-22  Score=165.55  Aligned_cols=155  Identities=19%  Similarity=0.188  Sum_probs=117.1

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      |+++||||+||||++++++|+++|++|++++|+...         .  ..+.++.++++|++|.+++++++++     ++
T Consensus         7 k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~---------~--~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   75 (252)
T PRK07856          7 RVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE---------T--VDGRPAEFHAADVRDPDQVAALVDAIVERHGR   75 (252)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh---------h--hcCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            899999999999999999999999999999874321         0  1134678899999999999888765     57


Q ss_pred             CCEEEEcccccccCCCCCCc----hhhHhhhHHHHHHHHHH----HHHc-CCCEEEEeccceecCCCCCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYVGESTLDP----LKYYHNITSNTLVVLES----MARH-GVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (248)
Q Consensus       146 iD~li~~Ag~~~~~~~~~~~----~~~~~~~~~~~~~ll~~----~~~~-~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~  216 (248)
                      +|+||||||........+.+    +..++.|+.++..+++.    |.+. +.++||++||...+.           +.+.
T Consensus        76 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~-----------~~~~  144 (252)
T PRK07856         76 LDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRR-----------PSPG  144 (252)
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCC-----------CCCC
Confidence            99999999975433322222    33445666665555444    4433 347999999976652           3445


Q ss_pred             CChHHHHHHHHHHHHHHHhhcCC--CcEEEEec
Q 025786          217 INPYGKAKKMAEDIILDFSKNSD--MAVLQCHR  247 (248)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~~~~~g--i~~~~v~P  247 (248)
                      ...|+.||++.+.+++.++.+++  ++++.++|
T Consensus       145 ~~~Y~~sK~a~~~l~~~la~e~~~~i~v~~i~P  177 (252)
T PRK07856        145 TAAYGAAKAGLLNLTRSLAVEWAPKVRVNAVVV  177 (252)
T ss_pred             CchhHHHHHHHHHHHHHHHHHhcCCeEEEEEEe
Confidence            77899999999999999998743  78888887

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=99.90  E-value=3.9e-22  Score=165.88  Aligned_cols=161  Identities=16%  Similarity=0.140  Sum_probs=119.7

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      ++++||||+|+||+++++.|+++|++|++++|+...   ..+..+++   ..++.++++|++|.++++++++.     ++
T Consensus         7 ~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~---~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (257)
T PRK07067          7 KVALLTGAASGIGEAVAERYLAEGARVVIADIKPAR---ARLAALEI---GPAAIAVSLDVTRQDSIDRIVAAAVERFGG   80 (257)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHH---HHHHHHHh---CCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            899999999999999999999999999999864332   22222222   23578899999999999888875     57


Q ss_pred             CCEEEEcccccccCCCCC----CchhhHhhhHHHHHHHHHHH----HHcC-CCEEEEeccceecCCCCCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYVGESTL----DPLKYYHNITSNTLVVLESM----ARHG-VDTLIYSSTCATYGEPEKMPITEETPQAP  216 (248)
Q Consensus       146 iD~li~~Ag~~~~~~~~~----~~~~~~~~~~~~~~~ll~~~----~~~~-~~~iV~~SS~~~~g~~~~~~~~e~~~~~~  216 (248)
                      +|+||||||.....+..+    ..+..+..|..++..++..+    .+++ .++||++||....           .+.++
T Consensus        81 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~-----------~~~~~  149 (257)
T PRK07067         81 IDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGR-----------RGEAL  149 (257)
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhC-----------CCCCC
Confidence            999999999764433222    23334556666655555444    3332 3689999996543           12345


Q ss_pred             CChHHHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          217 INPYGKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                      ...|+.||++.+.+++.++.+   +|+++++++|.
T Consensus       150 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg  184 (257)
T PRK07067        150 VSHYCATKAAVISYTQSAALALIRHGINVNAIAPG  184 (257)
T ss_pred             CchhhhhHHHHHHHHHHHHHHhcccCeEEEEEeeC
Confidence            778999999999999999886   68999999984

>PRK05693 short chain dehydrogenase; Provisional

Probab=99.90  E-value=1.9e-22  Score=169.43  Aligned_cols=158  Identities=13%  Similarity=0.134  Sum_probs=116.5

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~  144 (248)
                      ||+++||||+||||++++++|+++|++|++++|+..+   ..+ +..     ..+.++.+|++|.+++++++++     +
T Consensus         1 mk~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~---~~~-~~~-----~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   71 (274)
T PRK05693          1 MPVVLITGCSSGIGRALADAFKAAGYEVWATARKAED---VEA-LAA-----AGFTAVQLDVNDGAALARLAEELEAEHG   71 (274)
T ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHH---HHH-HHH-----CCCeEEEeeCCCHHHHHHHHHHHHHhcC
Confidence            5899999999999999999999999999999864322   111 111     1367789999999999888764     5


Q ss_pred             CCCEEEEcccccccCCCCCCc----hhhHhhhHHHHHH----HHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCC
Q 025786          145 AFDAVMHFAAVAYVGESTLDP----LKYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (248)
Q Consensus       145 ~iD~li~~Ag~~~~~~~~~~~----~~~~~~~~~~~~~----ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~  216 (248)
                      ++|+||||||........+.+    +..++.|..++..    +++.|.+ +.++||++||...+.           +.+.
T Consensus        72 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-~~g~iv~isS~~~~~-----------~~~~  139 (274)
T PRK05693         72 GLDVLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRR-SRGLVVNIGSVSGVL-----------VTPF  139 (274)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhh-cCCEEEEECCccccC-----------CCCC
Confidence            799999999976443333322    2344555555444    4454544 347899999976542           2234


Q ss_pred             CChHHHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          217 INPYGKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                      ..+|+.||++.+.++++++.+   +|+++++++|.
T Consensus       140 ~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~pg  174 (274)
T PRK05693        140 AGAYCASKAAVHALSDALRLELAPFGVQVMEVQPG  174 (274)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecC
Confidence            678999999999999999876   68999999983

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.90  E-value=4.8e-22  Score=165.29  Aligned_cols=166  Identities=17%  Similarity=0.137  Sum_probs=121.2

Q ss_pred             eEEEEecCCc--hhHHHHHHHHHHCCCEEEEEecCCCC--------cchhhhhhhhhcCCCCceEEEEccCCCHHHHHHH
Q 025786           71 THVLVTGGAG--YIGSHAALRLLKDSYRVTIVDNLSRG--------NIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKF  140 (248)
Q Consensus        71 k~vlITGasg--~IG~~la~~L~~~G~~V~~~~r~~~~--------~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~  140 (248)
                      |+++||||+|  |||.+++++|+++|++|++++|++.+        ........+++...+.++.++++|+++.+++..+
T Consensus         6 k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   85 (256)
T PRK12748          6 KIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPYAPNRV   85 (256)
T ss_pred             cEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHHHHHHH
Confidence            8999999995  89999999999999999999875211        1111112222222245688999999999999887


Q ss_pred             hhc-----CCCCEEEEcccccccCCCCCC----chhhHhhhHHHHHHHHHHHH----HcCCCEEEEeccceecCCCCCCC
Q 025786          141 FSE-----NAFDAVMHFAAVAYVGESTLD----PLKYYHNITSNTLVVLESMA----RHGVDTLIYSSTCATYGEPEKMP  207 (248)
Q Consensus       141 ~~~-----~~iD~li~~Ag~~~~~~~~~~----~~~~~~~~~~~~~~ll~~~~----~~~~~~iV~~SS~~~~g~~~~~~  207 (248)
                      +++     +++|+||||||.....+..+.    .+..+..|+.++..++..+.    +...++||++||...++      
T Consensus        86 ~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~------  159 (256)
T PRK12748         86 FYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQSLG------  159 (256)
T ss_pred             HHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCccccC------
Confidence            765     679999999997544332222    23345667666666655543    33457999999977653      


Q ss_pred             CCCCCCCCCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          208 ITEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       208 ~~e~~~~~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                           +.++...|+.||++++.+++.++.+   .+++++.++|
T Consensus       160 -----~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~P  197 (256)
T PRK12748        160 -----PMPDELAYAATKGAIEAFTKSLAPELAEKGITVNAVNP  197 (256)
T ss_pred             -----CCCCchHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEe
Confidence                 3334678999999999999999887   4899999998

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=99.90  E-value=1.2e-22  Score=157.98  Aligned_cols=155  Identities=18%  Similarity=0.249  Sum_probs=116.5

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC-EEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~  144 (248)
                      |+++||||+++||++++++|+++|. .|++++|+ .+.+...+...++.....++.++++|+++.+++++++++     +
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~-~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   79 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRS-EDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFG   79 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESS-CHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeec-ccccccccccccccccccccccccccccccccccccccccccccc
Confidence            6899999999999999999999966 66677764 112333333344433356899999999999999988876     6


Q ss_pred             CCCEEEEcccccccCCCCCCchhhHh----hhHHHHHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCCChH
Q 025786          145 AFDAVMHFAAVAYVGESTLDPLKYYH----NITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPY  220 (248)
Q Consensus       145 ~iD~li~~Ag~~~~~~~~~~~~~~~~----~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y  220 (248)
                      ++|+||||||........+.+.+.+.    .|..+...+...+..++.++||++||....           .+.+....|
T Consensus        80 ~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~g~iv~~sS~~~~-----------~~~~~~~~Y  148 (167)
T PF00106_consen   80 PLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLPQGGGKIVNISSIAGV-----------RGSPGMSAY  148 (167)
T ss_dssp             SESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHTTEEEEEEEEGGGT-----------SSSTTBHHH
T ss_pred             cccccccccccccccccccccchhhhhccccccceeeeeeehheeccccceEEecchhhc-----------cCCCCChhH
Confidence            89999999998775554444444444    444444555555555567899999997775           345557899


Q ss_pred             HHHHHHHHHHHHHHhhc
Q 025786          221 GKAKKMAEDIILDFSKN  237 (248)
Q Consensus       221 ~~sK~a~e~l~~~~~~~  237 (248)
                      +.||++.+.|++.++.|
T Consensus       149 ~askaal~~~~~~la~e  165 (167)
T PF00106_consen  149 SASKAALRGLTQSLAAE  165 (167)
T ss_dssp             HHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHh
Confidence            99999999999999987

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.90  E-value=6e-22  Score=162.97  Aligned_cols=164  Identities=18%  Similarity=0.156  Sum_probs=121.7

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      ++++||||+|+||++++++|+++|++|++++|+..+.+.   ..+++...+.++.++.+|+++++++.+++++     ++
T Consensus         8 ~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~---~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   84 (239)
T PRK07666          8 KNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKA---VAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGS   84 (239)
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHH---HHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            789999999999999999999999999999875433222   2222222245788899999999999888874     57


Q ss_pred             CCEEEEcccccccCCCCCCc----hhhHhhhHHHHHHH----HHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYVGESTLDP----LKYYHNITSNTLVV----LESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (248)
Q Consensus       146 iD~li~~Ag~~~~~~~~~~~----~~~~~~~~~~~~~l----l~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (248)
                      +|+||||||........+.+    ++.++.|..++..+    ++.+.+.+.+++|++||...+.           +..+.
T Consensus        85 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~-----------~~~~~  153 (239)
T PRK07666         85 IDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQK-----------GAAVT  153 (239)
T ss_pred             ccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhcc-----------CCCCC
Confidence            99999999976443322222    23455666655444    4445556678999999976652           23346


Q ss_pred             ChHHHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          218 NPYGKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                      ..|+.||.+.+.+++.++.+   .|+++++++|.
T Consensus       154 ~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg  187 (239)
T PRK07666        154 SAYSASKFGVLGLTESLMQEVRKHNIRVTALTPS  187 (239)
T ss_pred             cchHHHHHHHHHHHHHHHHHhhccCcEEEEEecC
Confidence            68999999999999999866   58999999984

>PRK12937 short chain dehydrogenase; Provisional

Probab=99.90  E-value=4.9e-22  Score=163.87  Aligned_cols=164  Identities=26%  Similarity=0.308  Sum_probs=119.6

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      ++++||||+|+||++++++|+++|++|+++.++..  ....+..+++...+.++.++.+|++|.+++.+++++     ++
T Consensus         6 ~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   83 (245)
T PRK12937          6 KVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSA--AAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFGR   83 (245)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCH--HHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            89999999999999999999999999988765322  122222223322345788999999999999888875     57


Q ss_pred             CCEEEEcccccccCCCCCCch----hhHhhhHHHHHHHHHHHHHc--CCCEEEEeccceecCCCCCCCCCCCCCCCCCCh
Q 025786          146 FDAVMHFAAVAYVGESTLDPL----KYYHNITSNTLVVLESMARH--GVDTLIYSSTCATYGEPEKMPITEETPQAPINP  219 (248)
Q Consensus       146 iD~li~~Ag~~~~~~~~~~~~----~~~~~~~~~~~~ll~~~~~~--~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~  219 (248)
                      +|+||||||........+.+.    ..+..|+.+...++..+.+.  ..++||++||.+.+           .+.++...
T Consensus        84 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~-----------~~~~~~~~  152 (245)
T PRK12937         84 IDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSVIA-----------LPLPGYGP  152 (245)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeecccc-----------CCCCCCch
Confidence            999999999754333222223    33445655555555554432  23689999986654           23445778


Q ss_pred             HHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          220 YGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       220 Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      |+.+|.+.+.+++.++.+   .++++++++|
T Consensus       153 Y~~sK~a~~~~~~~~a~~~~~~~i~v~~i~p  183 (245)
T PRK12937        153 YAASKAAVEGLVHVLANELRGRGITVNAVAP  183 (245)
T ss_pred             hHHHHHHHHHHHHHHHHHhhhcCeEEEEEEe
Confidence            999999999999999877   4799999998

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=99.90  E-value=4.7e-22  Score=164.71  Aligned_cols=155  Identities=18%  Similarity=0.192  Sum_probs=119.5

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      |++|||||+|+||++++++|+++|++|++++|+.         ..   ..+.++.++++|++|.+++.+++++     ++
T Consensus         9 k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~---------~~---~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   76 (252)
T PRK08220          9 KTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF---------LT---QEDYPFATFVLDVSDAAAVAQVCQRLLAETGP   76 (252)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch---------hh---hcCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            8999999999999999999999999999998643         01   1134688899999999999988875     57


Q ss_pred             CCEEEEcccccccCCCCCC----chhhHhhhHHHHHH----HHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYVGESTLD----PLKYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (248)
Q Consensus       146 iD~li~~Ag~~~~~~~~~~----~~~~~~~~~~~~~~----ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (248)
                      +|+||||||.....+..+.    ....++.|..+...    +++.|++.+.++||++||....           .+..+.
T Consensus        77 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~-----------~~~~~~  145 (252)
T PRK08220         77 LDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAH-----------VPRIGM  145 (252)
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhc-----------cCCCCC
Confidence            9999999997654333222    23344555555444    4455555666799999996553           234457


Q ss_pred             ChHHHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          218 NPYGKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                      ..|+.||++.+.+++.++.+   +|+++++++|.
T Consensus       146 ~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg  179 (252)
T PRK08220        146 AAYGASKAALTSLAKCVGLELAPYGVRCNVVSPG  179 (252)
T ss_pred             chhHHHHHHHHHHHHHHHHHhhHhCeEEEEEecC
Confidence            78999999999999999987   78999999984

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=99.90  E-value=3.3e-22  Score=166.85  Aligned_cols=159  Identities=16%  Similarity=0.188  Sum_probs=114.8

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      |+++||||+||||++++++|+++|++|++++|+..   ...+..+.   .+.++.++++|++|.+++.+++++     ++
T Consensus         6 k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~---~~~~l~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   79 (262)
T TIGR03325         6 EVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAA---GLQELEAA---HGDAVVGVEGDVRSLDDHKEAVARCVAAFGK   79 (262)
T ss_pred             cEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHH---HHHHHHhh---cCCceEEEEeccCCHHHHHHHHHHHHHHhCC
Confidence            89999999999999999999999999999986432   22222111   134678899999999998887765     68


Q ss_pred             CCEEEEccccccc-CCCCC--------CchhhHhhhHHHHHH----HHHHHHHcCCCEEEEeccceecCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYV-GESTL--------DPLKYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEET  212 (248)
Q Consensus       146 iD~li~~Ag~~~~-~~~~~--------~~~~~~~~~~~~~~~----ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~  212 (248)
                      +|+||||||.... .+..+        ..+..++.|+.++..    +++.|.+.+ +++|++||...+.           
T Consensus        80 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-g~iv~~sS~~~~~-----------  147 (262)
T TIGR03325        80 IDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASR-GSVIFTISNAGFY-----------  147 (262)
T ss_pred             CCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcC-CCEEEEeccceec-----------
Confidence            9999999997432 11111        122344555555444    555555444 6788888866541           


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHhhcCC--CcEEEEec
Q 025786          213 PQAPINPYGKAKKMAEDIILDFSKNSD--MAVLQCHR  247 (248)
Q Consensus       213 ~~~~~~~Y~~sK~a~e~l~~~~~~~~g--i~~~~v~P  247 (248)
                      +.+....|+.||++.+.+++.++.+++  ++++.|.|
T Consensus       148 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~irvn~i~P  184 (262)
T TIGR03325       148 PNGGGPLYTAAKHAVVGLVKELAFELAPYVRVNGVAP  184 (262)
T ss_pred             CCCCCchhHHHHHHHHHHHHHHHHhhccCeEEEEEec
Confidence            233456899999999999999999854  88999888

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK06949 short chain dehydrogenase; Provisional

Probab=99.90  E-value=7.5e-22  Score=164.05  Aligned_cols=163  Identities=15%  Similarity=0.152  Sum_probs=119.1

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      |+++||||+|+||++++++|+++|++|++++|+...   +.+...++.....++.++.+|+++.+++.+++++     ++
T Consensus        10 k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~---~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   86 (258)
T PRK06949         10 KVALVTGASSGLGARFAQVLAQAGAKVVLASRRVER---LKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAGT   86 (258)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHH---HHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence            999999999999999999999999999999875432   2222222222234688899999999999888765     57


Q ss_pred             CCEEEEcccccccCCCCCCchh----hHhhhHHHHHH----HHHHHHHcC--------CCEEEEeccceecCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYVGESTLDPLK----YYHNITSNTLV----VLESMARHG--------VDTLIYSSTCATYGEPEKMPIT  209 (248)
Q Consensus       146 iD~li~~Ag~~~~~~~~~~~~~----~~~~~~~~~~~----ll~~~~~~~--------~~~iV~~SS~~~~g~~~~~~~~  209 (248)
                      +|+||||||........+.+.+    .+..|+.+...    +++.+.+..        .+++|++||...+.        
T Consensus        87 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~--------  158 (258)
T PRK06949         87 IDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLR--------  158 (258)
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccC--------
Confidence            9999999997544332222222    33444444443    445554442        36899999977652        


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          210 EETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       210 e~~~~~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                         +.++..+|+.+|++.+.+++.++.+   .++++++++|
T Consensus       159 ---~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~p  196 (258)
T PRK06949        159 ---VLPQIGLYCMSKAAVVHMTRAMALEWGRHGINVNAICP  196 (258)
T ss_pred             ---CCCCccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEee
Confidence               3344678999999999999999887   5899999998

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=99.90  E-value=3.7e-22  Score=165.47  Aligned_cols=165  Identities=18%  Similarity=0.165  Sum_probs=120.5

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~  144 (248)
                      +|++|||||+|+||++++++|+++|++|++++|+....+...+   .+...+.++.++.+|++|.+++.+++++     +
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~---~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   77 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAK---VATDAGGSVIYLVADVTKEDEIADMIAAAAAEFG   77 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---HHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            3789999999999999999999999999999875433222222   2222234688899999999988877754     4


Q ss_pred             CCCEEEEcccccccCCCCCCch----hhHhhhHHHHHH----HHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCC
Q 025786          145 AFDAVMHFAAVAYVGESTLDPL----KYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (248)
Q Consensus       145 ~iD~li~~Ag~~~~~~~~~~~~----~~~~~~~~~~~~----ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~  216 (248)
                      ++|+||||||..........+.    ..+..|..++..    +++.|.+.+.+++|++||...+.           +.+.
T Consensus        78 ~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~-----------~~~~  146 (255)
T TIGR01963        78 GLDILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGLV-----------ASPF  146 (255)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcC-----------CCCC
Confidence            6999999999764433222222    233455555444    45555667778999999976653           2233


Q ss_pred             CChHHHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          217 INPYGKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                      ...|+.+|.+.+.+++.++.+   .++++++++|.
T Consensus       147 ~~~y~~sk~a~~~~~~~~~~~~~~~~i~v~~i~pg  181 (255)
T TIGR01963       147 KSAYVAAKHGLIGLTKVLALEVAAHGITVNAICPG  181 (255)
T ss_pred             CchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecC
Confidence            578999999999999998876   48999999984

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK08226 short chain dehydrogenase; Provisional

Probab=99.90  E-value=7.3e-22  Score=164.74  Aligned_cols=164  Identities=16%  Similarity=0.106  Sum_probs=119.6

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      ++++||||+||||+++++.|+++|++|++++|...    ..+..+++.....++.++.+|+++++++++++++     ++
T Consensus         7 ~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~----~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   82 (263)
T PRK08226          7 KTALITGALQGIGEGIARVFARHGANLILLDISPE----IEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGR   82 (263)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHH----HHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            89999999999999999999999999999987432    1122222222234678899999999999888875     57


Q ss_pred             CCEEEEcccccccCCCCCCchh----hHhhhHHHHHHH----HHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYVGESTLDPLK----YYHNITSNTLVV----LESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (248)
Q Consensus       146 iD~li~~Ag~~~~~~~~~~~~~----~~~~~~~~~~~l----l~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (248)
                      +|+||||||........+.+.+    .++.|+.+...+    ++.+.+.+.++||++||.....          .+.+..
T Consensus        83 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~----------~~~~~~  152 (263)
T PRK08226         83 IDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDM----------VADPGE  152 (263)
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhcc----------cCCCCc
Confidence            9999999997654443333333    344555555444    4445455567999999865421          122346


Q ss_pred             ChHHHHHHHHHHHHHHHhhcC---CCcEEEEecC
Q 025786          218 NPYGKAKKMAEDIILDFSKNS---DMAVLQCHRF  248 (248)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~~~~~---gi~~~~v~Pf  248 (248)
                      ..|+.+|++.+.+++.++.++   |++++.++|.
T Consensus       153 ~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~i~pg  186 (263)
T PRK08226        153 TAYALTKAAIVGLTKSLAVEYAQSGIRVNAICPG  186 (263)
T ss_pred             chHHHHHHHHHHHHHHHHHHhcccCcEEEEEecC
Confidence            789999999999999999874   7999999984

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.90  E-value=5.4e-22  Score=163.48  Aligned_cols=166  Identities=17%  Similarity=0.098  Sum_probs=120.8

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~  144 (248)
                      +|++|||||+|+||++++++|+++|++|+++.+....  ..............++.++.+|++|.+++.+++++     +
T Consensus         6 ~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~   83 (249)
T PRK12825          6 GRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEE--AAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERFG   83 (249)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHH--HHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHcC
Confidence            4799999999999999999999999999876653321  11112222222245688999999999999888764     4


Q ss_pred             CCCEEEEcccccccCCCCCC----chhhHhhhHHHHHHHHH----HHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCC
Q 025786          145 AFDAVMHFAAVAYVGESTLD----PLKYYHNITSNTLVVLE----SMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (248)
Q Consensus       145 ~iD~li~~Ag~~~~~~~~~~----~~~~~~~~~~~~~~ll~----~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~  216 (248)
                      ++|++|||||........+.    .+..++.|..+..++++    .+.+.+.+++|++||...+.           +..+
T Consensus        84 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~~-----------~~~~  152 (249)
T PRK12825         84 RIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGLP-----------GWPG  152 (249)
T ss_pred             CCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccCC-----------CCCC
Confidence            79999999997544332222    23344555555555444    44566678999999977763           2234


Q ss_pred             CChHHHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          217 INPYGKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                      ...|+.+|++.+.+++.++.+   .|++++++||.
T Consensus       153 ~~~y~~sK~~~~~~~~~~~~~~~~~~i~~~~i~pg  187 (249)
T PRK12825        153 RSNYAAAKAGLVGLTKALARELAEYGITVNMVAPG  187 (249)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEEC
Confidence            678999999999999999877   68999999993

>PRK12939 short chain dehydrogenase; Provisional

Probab=99.90  E-value=7.6e-22  Score=163.11  Aligned_cols=163  Identities=19%  Similarity=0.245  Sum_probs=120.3

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      |+++||||+|+||++++++|+++|++|++++|+..+.   .+..+++.....++.++.+|++|.+++++++++     ++
T Consensus         8 ~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~---~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   84 (250)
T PRK12939          8 KRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEA---RELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGG   84 (250)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHH---HHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            8999999999999999999999999999988643322   222222222234688999999999999888865     57


Q ss_pred             CCEEEEcccccccCCCCCCchh----hHhhhHHHHHHH----HHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYVGESTLDPLK----YYHNITSNTLVV----LESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (248)
Q Consensus       146 iD~li~~Ag~~~~~~~~~~~~~----~~~~~~~~~~~l----l~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (248)
                      +|+||||||........+.+.+    .+..|..+...+    ++.+.+.+.+++|++||...+.           +.+..
T Consensus        85 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~~  153 (250)
T PRK12939         85 LDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALW-----------GAPKL  153 (250)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhcc-----------CCCCc
Confidence            9999999997654333322222    344555555444    4555555567999999976652           23345


Q ss_pred             ChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          218 NPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      ..|+.+|++.+.+++.++.+   .++++++++|
T Consensus       154 ~~y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~p  186 (250)
T PRK12939        154 GAYVASKGAVIGMTRSLARELGGRGITVNAIAP  186 (250)
T ss_pred             chHHHHHHHHHHHHHHHHHHHhhhCEEEEEEEE
Confidence            68999999999999999876   5799999988

>PRK06101 short chain dehydrogenase; Provisional

Probab=99.90  E-value=2.3e-22  Score=165.79  Aligned_cols=161  Identities=15%  Similarity=0.150  Sum_probs=118.1

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc--CCCC
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE--NAFD  147 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~~iD  147 (248)
                      |++++||||+||||++++++|+++|++|++++|+...   ..+ +.+   ...++.++++|++|++++++++++  ..+|
T Consensus         1 ~~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~---~~~-~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d   73 (240)
T PRK06101          1 MTAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSV---LDE-LHT---QSANIFTLAFDVTDHPGTKAALSQLPFIPE   73 (240)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHH---HHH-HHH---hcCCCeEEEeeCCCHHHHHHHHHhcccCCC
Confidence            4789999999999999999999999999999874322   111 111   123578899999999999999886  3579


Q ss_pred             EEEEcccccccCCCC-CC---chhhHhhhHHHHHHHHHHHHHc--CCCEEEEeccceecCCCCCCCCCCCCCCCCCChHH
Q 025786          148 AVMHFAAVAYVGEST-LD---PLKYYHNITSNTLVVLESMARH--GVDTLIYSSTCATYGEPEKMPITEETPQAPINPYG  221 (248)
Q Consensus       148 ~li~~Ag~~~~~~~~-~~---~~~~~~~~~~~~~~ll~~~~~~--~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~  221 (248)
                      ++|||||........ .+   .+..++.|..++.++++.+...  +.++||++||....           .+.+....|+
T Consensus        74 ~~i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~~~-----------~~~~~~~~Y~  142 (240)
T PRK06101         74 LWIFNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIASE-----------LALPRAEAYG  142 (240)
T ss_pred             EEEEcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechhhc-----------cCCCCCchhh
Confidence            999999864322211 12   2334666777777766665542  34689999886543           1233466899


Q ss_pred             HHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          222 KAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       222 ~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                      .||++++.+++.++.+   .|+++++++|.
T Consensus       143 asK~a~~~~~~~l~~e~~~~gi~v~~v~pg  172 (240)
T PRK06101        143 ASKAAVAYFARTLQLDLRPKGIEVVTVFPG  172 (240)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCceEEEEeCC
Confidence            9999999999999854   68999999984

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=99.90  E-value=8.4e-22  Score=163.15  Aligned_cols=160  Identities=19%  Similarity=0.230  Sum_probs=119.5

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      |+++||||+|+||.++++.|+++|++|++++|+..+   +.+....+   +.++.++.+|++|.+++.+++++     ++
T Consensus         1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~---~~~~~~~~---~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~   74 (248)
T PRK10538          1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQER---LQELKDEL---GDNLYIAQLDVRNRAAIEEMLASLPAEWRN   74 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHH---HHHHHHHh---ccceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            579999999999999999999999999999874322   22222222   23688899999999999888764     47


Q ss_pred             CCEEEEccccccc-CCCCCCc----hhhHhhhHHH----HHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYV-GESTLDP----LKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (248)
Q Consensus       146 iD~li~~Ag~~~~-~~~~~~~----~~~~~~~~~~----~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~  216 (248)
                      +|+||||||.... .+..+..    .+.++.|..+    +..+++.|.+.+.++||++||...+           .+..+
T Consensus        75 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~-----------~~~~~  143 (248)
T PRK10538         75 IDVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGS-----------WPYAG  143 (248)
T ss_pred             CCEEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccC-----------CCCCC
Confidence            9999999997431 2222222    2334555555    4556777777777899999996654           23345


Q ss_pred             CChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          217 INPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      ...|+.||++.+++++.++.+   .++++++++|
T Consensus       144 ~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~p  177 (248)
T PRK10538        144 GNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEP  177 (248)
T ss_pred             CchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeC
Confidence            678999999999999999877   4799999988

>PRK05875 short chain dehydrogenase; Provisional

Probab=99.89  E-value=5.4e-22  Score=166.69  Aligned_cols=165  Identities=21%  Similarity=0.207  Sum_probs=118.9

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      |+++||||+|+||+++++.|+++|++|++++|.....+...+.+.... ...++.++.+|++|++++.+++++     ++
T Consensus         8 k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   86 (276)
T PRK05875          8 RTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALK-GAGAVRYEPADVTDEDQVARAVDAATAWHGR   86 (276)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcc-CCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            899999999999999999999999999999875432222222222211 124688899999999999888775     47


Q ss_pred             CCEEEEccccccc-CCCCCCc----hhhHhhhHHHHHHH----HHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYV-GESTLDP----LKYYHNITSNTLVV----LESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (248)
Q Consensus       146 iD~li~~Ag~~~~-~~~~~~~----~~~~~~~~~~~~~l----l~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~  216 (248)
                      +|+||||||.... ....+..    ...+..|..+...+    ++.+.+.+.++||++||...+.           +.++
T Consensus        87 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~-----------~~~~  155 (276)
T PRK05875         87 LHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASN-----------THRW  155 (276)
T ss_pred             CCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcC-----------CCCC
Confidence            9999999996432 1221122    22344455554444    4555555567999999977652           2344


Q ss_pred             CChHHHHHHHHHHHHHHHhhcC---CCcEEEEec
Q 025786          217 INPYGKAKKMAEDIILDFSKNS---DMAVLQCHR  247 (248)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~~~~~---gi~~~~v~P  247 (248)
                      .++|+.||++.+.+++.++.++   ++++++++|
T Consensus       156 ~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~P  189 (276)
T PRK05875        156 FGAYGVTKSAVDHLMKLAADELGPSWVRVNSIRP  189 (276)
T ss_pred             CcchHHHHHHHHHHHHHHHHHhcccCeEEEEEec
Confidence            6789999999999999999874   699999998

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=99.89  E-value=1.8e-23  Score=164.50  Aligned_cols=161  Identities=20%  Similarity=0.239  Sum_probs=127.0

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~  144 (248)
                      +|++++|||.||||++++++|+++|.++.+++.+.++. +....+++..+ ...+.|+++|+++..++++.+++     +
T Consensus         5 GKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~-~a~akL~ai~p-~~~v~F~~~DVt~~~~~~~~f~ki~~~fg   82 (261)
T KOG4169|consen    5 GKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENP-EAIAKLQAINP-SVSVIFIKCDVTNRGDLEAAFDKILATFG   82 (261)
T ss_pred             CceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCH-HHHHHHhccCC-CceEEEEEeccccHHHHHHHHHHHHHHhC
Confidence            39999999999999999999999999888876544432 22333444433 45789999999999999999887     7


Q ss_pred             CCCEEEEcccccccCCCCCCchhhHhhhHH----HHHHHHHHHHHcC---CCEEEEeccceecCCCCCCCCCCCCCCCCC
Q 025786          145 AFDAVMHFAAVAYVGESTLDPLKYYHNITS----NTLVVLESMARHG---VDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (248)
Q Consensus       145 ~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~----~~~~ll~~~~~~~---~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (248)
                      .+|++||+||+...    .+.+..+..|..    +|...+|+|.+..   ++-||++||..++           .|.+-.
T Consensus        83 ~iDIlINgAGi~~d----kd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL-----------~P~p~~  147 (261)
T KOG4169|consen   83 TIDILINGAGILDD----KDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGL-----------DPMPVF  147 (261)
T ss_pred             ceEEEEcccccccc----hhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEecccccc-----------Cccccc
Confidence            89999999998743    234444555544    4778999997753   5689999997776           455667


Q ss_pred             ChHHHHHHHHHHHHHHHhhc-----CCCcEEEEec
Q 025786          218 NPYGKAKKMAEDIILDFSKN-----SDMAVLQCHR  247 (248)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~~~~-----~gi~~~~v~P  247 (248)
                      ..|++||++...|+++++..     .|+++..+.|
T Consensus       148 pVY~AsKaGVvgFTRSla~~ayy~~sGV~~~avCP  182 (261)
T KOG4169|consen  148 PVYAASKAGVVGFTRSLADLAYYQRSGVRFNAVCP  182 (261)
T ss_pred             hhhhhcccceeeeehhhhhhhhHhhcCEEEEEECC
Confidence            78999999999999997755     5999999988

>PRK06841 short chain dehydrogenase; Provisional

Probab=99.89  E-value=5.1e-22  Score=164.86  Aligned_cols=160  Identities=18%  Similarity=0.161  Sum_probs=118.9

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      |+++||||+|+||++++++|+++|++|++++|+...    .+...+..  ..++.++++|+++++++.+++++     ++
T Consensus        16 k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~----~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   89 (255)
T PRK06841         16 KVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDV----AEVAAQLL--GGNAKGLVCDVSDSQSVEAAVAAVISAFGR   89 (255)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHH----HHHHHHhh--CCceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            899999999999999999999999999999875321    12222221  23567899999999999888865     47


Q ss_pred             CCEEEEcccccccCCCCCCch----hhHhhhHHHHHH----HHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYVGESTLDPL----KYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (248)
Q Consensus       146 iD~li~~Ag~~~~~~~~~~~~----~~~~~~~~~~~~----ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (248)
                      +|+||||||........+.+.    ..+..|..+...    +++.|.+.+.++||++||.....           +.+..
T Consensus        90 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~-----------~~~~~  158 (255)
T PRK06841         90 IDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVV-----------ALERH  158 (255)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhcc-----------CCCCC
Confidence            999999999764433322222    344555555444    44455555678999999976541           23346


Q ss_pred             ChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          218 NPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      ..|+.||++.+.+++.++.+   .|++++.|+|
T Consensus       159 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~p  191 (255)
T PRK06841        159 VAYCASKAGVVGMTKVLALEWGPYGITVNAISP  191 (255)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHhhCeEEEEEEe
Confidence            68999999999999999988   4899999998

>PRK07023 short chain dehydrogenase; Provisional

Probab=99.89  E-value=3.4e-22  Score=164.92  Aligned_cols=159  Identities=15%  Similarity=0.101  Sum_probs=118.7

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc------
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE------  143 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~------  143 (248)
                      |++++||||+||||++++++|+++|++|++++|+..+  ..   ..   ..+.++.++++|++|.+++++++++      
T Consensus         1 ~~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~--~~---~~---~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   72 (243)
T PRK07023          1 AVRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHP--SL---AA---AAGERLAEVELDLSDAAAAAAWLAGDLLAAF   72 (243)
T ss_pred             CceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcch--hh---hh---ccCCeEEEEEeccCCHHHHHHHHHHHHHHHh
Confidence            4789999999999999999999999999999875322  11   11   1234688899999999999885543      


Q ss_pred             ---CCCCEEEEccccccc-CCCCCCc----hhhHhhhHHH----HHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCC
Q 025786          144 ---NAFDAVMHFAAVAYV-GESTLDP----LKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEE  211 (248)
Q Consensus       144 ---~~iD~li~~Ag~~~~-~~~~~~~----~~~~~~~~~~----~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~  211 (248)
                         .++|++|||||.... ....+.+    +..+..|..+    +..+++.+.+.+.++||++||...+.          
T Consensus        73 ~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~----------  142 (243)
T PRK07023         73 VDGASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAARN----------  142 (243)
T ss_pred             ccCCCceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhcC----------
Confidence               368999999997543 2222222    3334455555    34456666666667999999977652          


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHhhc--CCCcEEEEec
Q 025786          212 TPQAPINPYGKAKKMAEDIILDFSKN--SDMAVLQCHR  247 (248)
Q Consensus       212 ~~~~~~~~Y~~sK~a~e~l~~~~~~~--~gi~~~~v~P  247 (248)
                       +.++...|+.+|.+.+.+++.++.+  .++++++++|
T Consensus       143 -~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~i~v~~v~p  179 (243)
T PRK07023        143 -AYAGWSVYCATKAALDHHARAVALDANRALRIVSLAP  179 (243)
T ss_pred             -CCCCchHHHHHHHHHHHHHHHHHhcCCCCcEEEEecC
Confidence             4455789999999999999999876  6899999998

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=99.89  E-value=5e-22  Score=164.16  Aligned_cols=166  Identities=17%  Similarity=0.151  Sum_probs=123.1

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~  144 (248)
                      +|+++||||+|+||++++++|+++|++|++++|+..+..   +..+.+.....++.++.+|++|.+++.+++++     +
T Consensus         6 ~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~---~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   82 (251)
T PRK12826          6 GRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAA---ATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFG   82 (251)
T ss_pred             CCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHH---HHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            389999999999999999999999999999987543222   22222322234688999999999999998865     4


Q ss_pred             CCCEEEEcccccccCCCCC----CchhhHhhhHHHHHHHH----HHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCC
Q 025786          145 AFDAVMHFAAVAYVGESTL----DPLKYYHNITSNTLVVL----ESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (248)
Q Consensus       145 ~iD~li~~Ag~~~~~~~~~----~~~~~~~~~~~~~~~ll----~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~  216 (248)
                      ++|+||||||.....+...    +....+..|..+...++    +.+.+.+.++||++||...++          .+.++
T Consensus        83 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~~----------~~~~~  152 (251)
T PRK12826         83 RLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGPR----------VGYPG  152 (251)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhhc----------cCCCC
Confidence            7999999999765433222    22334555666655544    445566678999999976651          12344


Q ss_pred             CChHHHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          217 INPYGKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                      ...|+.+|.+++.+++.++.+   .|+++++++|.
T Consensus       153 ~~~y~~sK~a~~~~~~~~~~~~~~~~i~~~~i~pg  187 (251)
T PRK12826        153 LAHYAASKAGLVGFTRALALELAARNITVNSVHPG  187 (251)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeC
Confidence            678999999999999999876   58999999985

>PRK06500 short chain dehydrogenase; Provisional

Probab=99.89  E-value=6e-22  Score=163.69  Aligned_cols=160  Identities=19%  Similarity=0.193  Sum_probs=118.6

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      |+++||||+|+||++++++|+++|++|++++|+.   +...+..+++   +.++.++++|++|.+++.++++.     ++
T Consensus         7 k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~---~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (249)
T PRK06500          7 KTALITGGTSGIGLETARQFLAEGARVAITGRDP---ASLEAARAEL---GESALVIRADAGDVAAQKALAQALAEAFGR   80 (249)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCH---HHHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            8999999999999999999999999999988642   2222222222   34678899999999988777654     57


Q ss_pred             CCEEEEcccccccCCCC----CCchhhHhhhHHHHHHHHHHHHH--cCCCEEEEecccee-cCCCCCCCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYVGEST----LDPLKYYHNITSNTLVVLESMAR--HGVDTLIYSSTCAT-YGEPEKMPITEETPQAPIN  218 (248)
Q Consensus       146 iD~li~~Ag~~~~~~~~----~~~~~~~~~~~~~~~~ll~~~~~--~~~~~iV~~SS~~~-~g~~~~~~~~e~~~~~~~~  218 (248)
                      +|+||||||........    +..+..++.|..++..+++.+.+  ...+++|++||... ++            .+...
T Consensus        81 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~S~~~~~~------------~~~~~  148 (249)
T PRK06500         81 LDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLNGSINAHIG------------MPNSS  148 (249)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEechHhccC------------CCCcc
Confidence            99999999975433322    23344566777777777766653  22357888777443 32            23467


Q ss_pred             hHHHHHHHHHHHHHHHhhcC---CCcEEEEecC
Q 025786          219 PYGKAKKMAEDIILDFSKNS---DMAVLQCHRF  248 (248)
Q Consensus       219 ~Y~~sK~a~e~l~~~~~~~~---gi~~~~v~Pf  248 (248)
                      +|+.+|++.+.+++.++.++   |+++++++|.
T Consensus       149 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg  181 (249)
T PRK06500        149 VYAASKAALLSLAKTLSGELLPRGIRVNAVSPG  181 (249)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeC
Confidence            89999999999999998774   8999999983

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.89  E-value=8.6e-22  Score=163.07  Aligned_cols=164  Identities=15%  Similarity=0.123  Sum_probs=119.3

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      ++++||||+||||++++++|+++|++|++..+..  .+........+...+.++.++.+|+++.+++.+++++     ++
T Consensus         7 ~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   84 (252)
T PRK06077          7 KVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKR--AEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRYGV   84 (252)
T ss_pred             cEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCC--hHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHcCC
Confidence            8999999999999999999999999998776432  1222222222222234677889999999999888775     57


Q ss_pred             CCEEEEcccccccCCCCCCc----hhhHhhhHHHHHHHHHHHHHc--CCCEEEEeccceecCCCCCCCCCCCCCCCCCCh
Q 025786          146 FDAVMHFAAVAYVGESTLDP----LKYYHNITSNTLVVLESMARH--GVDTLIYSSTCATYGEPEKMPITEETPQAPINP  219 (248)
Q Consensus       146 iD~li~~Ag~~~~~~~~~~~----~~~~~~~~~~~~~ll~~~~~~--~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~  219 (248)
                      +|+||||||.....+..+.+    +..++.|+.++..++..+.+.  ..++||++||..++.           +.++...
T Consensus        85 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~-----------~~~~~~~  153 (252)
T PRK06077         85 ADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAGIR-----------PAYGLSI  153 (252)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhccC-----------CCCCchH
Confidence            99999999975444333222    234455666555544444321  236899999987763           4456789


Q ss_pred             HHHHHHHHHHHHHHHhhcC--CCcEEEEec
Q 025786          220 YGKAKKMAEDIILDFSKNS--DMAVLQCHR  247 (248)
Q Consensus       220 Y~~sK~a~e~l~~~~~~~~--gi~~~~v~P  247 (248)
                      |+.||++.+.+++.++.++  ++.+.+++|
T Consensus       154 Y~~sK~~~~~~~~~l~~~~~~~i~v~~v~P  183 (252)
T PRK06077        154 YGAMKAAVINLTKYLALELAPKIRVNAIAP  183 (252)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCEEEEEee
Confidence            9999999999999999885  689999988

>PRK06181 short chain dehydrogenase; Provisional

Probab=99.89  E-value=9.3e-22  Score=164.10  Aligned_cols=164  Identities=15%  Similarity=0.134  Sum_probs=122.2

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~  144 (248)
                      +++++||||+|+||++++++|+++|++|++++|+....+.   ..+++...+.++.++.+|++|.+++.+++++     +
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~---~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   77 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLAS---LAQELADHGGEALVVPTDVSDAEACERLIEAAVARFG   77 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH---HHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            3789999999999999999999999999999875433222   2222222345788899999999999888875     4


Q ss_pred             CCCEEEEcccccccCCCCCC-----chhhHhhhHHHHHHHHHHHHH---cCCCEEEEeccceecCCCCCCCCCCCCCCCC
Q 025786          145 AFDAVMHFAAVAYVGESTLD-----PLKYYHNITSNTLVVLESMAR---HGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (248)
Q Consensus       145 ~iD~li~~Ag~~~~~~~~~~-----~~~~~~~~~~~~~~ll~~~~~---~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~  216 (248)
                      ++|+||||||........+.     ..+.++.|..++..++..+..   .+.++||++||...+.           +..+
T Consensus        78 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS~~~~~-----------~~~~  146 (263)
T PRK06181         78 GIDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSSLAGLT-----------GVPT  146 (263)
T ss_pred             CCCEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEecccccC-----------CCCC
Confidence            79999999997654333222     233456677776666665532   2347899999977763           2344


Q ss_pred             CChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          217 INPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      ...|+.||.+.+.+++.++.+   .++++++++|
T Consensus       147 ~~~Y~~sK~~~~~~~~~l~~~~~~~~i~~~~i~p  180 (263)
T PRK06181        147 RSGYAASKHALHGFFDSLRIELADDGVAVTVVCP  180 (263)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhhhcCceEEEEec
Confidence            678999999999999998865   5899999998

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=99.89  E-value=7.2e-22  Score=164.88  Aligned_cols=159  Identities=14%  Similarity=0.195  Sum_probs=116.4

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      |+++||||+||||++++++|+++|++|++++|+..   ...+..++.   +.++.++++|++|.+++++++++     ++
T Consensus         7 k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~---~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   80 (263)
T PRK06200          7 QVALITGGGSGIGRALVERFLAEGARVAVLERSAE---KLASLRQRF---GDHVLVVEGDVTSYADNQRAVDQTVDAFGK   80 (263)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHH---HHHHHHHHh---CCcceEEEccCCCHHHHHHHHHHHHHhcCC
Confidence            89999999999999999999999999999986432   222222222   34578899999999999888765     58


Q ss_pred             CCEEEEccccccc-CCCCCCc--------hhhHhhhHHHH----HHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYV-GESTLDP--------LKYYHNITSNT----LVVLESMARHGVDTLIYSSTCATYGEPEKMPITEET  212 (248)
Q Consensus       146 iD~li~~Ag~~~~-~~~~~~~--------~~~~~~~~~~~----~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~  212 (248)
                      +|+||||||+... ....+.+        +..++.|..+.    ..+++.|++.+ ++||++||...+.           
T Consensus        81 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-g~iv~~sS~~~~~-----------  148 (263)
T PRK06200         81 LDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASG-GSMIFTLSNSSFY-----------  148 (263)
T ss_pred             CCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcC-CEEEEECChhhcC-----------
Confidence            9999999997532 1211111        12234455443    34555555443 6899999977652           


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHhhcC--CCcEEEEec
Q 025786          213 PQAPINPYGKAKKMAEDIILDFSKNS--DMAVLQCHR  247 (248)
Q Consensus       213 ~~~~~~~Y~~sK~a~e~l~~~~~~~~--gi~~~~v~P  247 (248)
                      +.++...|+.||++.+.+++.++.++  +|+++.|.|
T Consensus       149 ~~~~~~~Y~~sK~a~~~~~~~la~el~~~Irvn~i~P  185 (263)
T PRK06200        149 PGGGGPLYTASKHAVVGLVRQLAYELAPKIRVNGVAP  185 (263)
T ss_pred             CCCCCchhHHHHHHHHHHHHHHHHHHhcCcEEEEEeC
Confidence            23346689999999999999999884  489999988

>PRK08324 short chain dehydrogenase; Validated

Probab=99.89  E-value=7.4e-23  Score=191.68  Aligned_cols=163  Identities=23%  Similarity=0.273  Sum_probs=122.4

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      |+++||||+|+||+++++.|+++|++|++++|+...   ..+..+.+... .++.++.+|++|.+++.+++++     ++
T Consensus       423 k~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~---~~~~~~~l~~~-~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~  498 (681)
T PRK08324        423 KVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEA---AEAAAAELGGP-DRALGVACDVTDEAAVQAAFEEAALAFGG  498 (681)
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHH---HHHHHHHHhcc-CcEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            899999999999999999999999999999975432   22222233222 4688899999999999888764     57


Q ss_pred             CCEEEEcccccccCCCCCCchh----hHhhhHHHHHHH----HHHHHHcCC-CEEEEeccceecCCCCCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYVGESTLDPLK----YYHNITSNTLVV----LESMARHGV-DTLIYSSTCATYGEPEKMPITEETPQAP  216 (248)
Q Consensus       146 iD~li~~Ag~~~~~~~~~~~~~----~~~~~~~~~~~l----l~~~~~~~~-~~iV~~SS~~~~g~~~~~~~~e~~~~~~  216 (248)
                      +|+||||||........+.+.+    .+..|..++..+    ++.+++++. ++||++||..++.           +.++
T Consensus       499 iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~-----------~~~~  567 (681)
T PRK08324        499 VDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVN-----------PGPN  567 (681)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccC-----------CCCC
Confidence            9999999998654443333333    344555555554    566666553 7999999976652           2334


Q ss_pred             CChHHHHHHHHHHHHHHHhhcC---CCcEEEEecC
Q 025786          217 INPYGKAKKMAEDIILDFSKNS---DMAVLQCHRF  248 (248)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~~~~~---gi~~~~v~Pf  248 (248)
                      ..+|+.||++.+.+++.++.++   |+++++++|.
T Consensus       568 ~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~Pg  602 (681)
T PRK08324        568 FGAYGAAKAAELHLVRQLALELGPDGIRVNGVNPD  602 (681)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCc
Confidence            6789999999999999999874   6999999984

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.89  E-value=3.6e-22  Score=176.07  Aligned_cols=162  Identities=26%  Similarity=0.314  Sum_probs=136.7

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCC-EEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~  148 (248)
                      +|+|+||||+|-||+++|+++++.+. ++++.+|+..+......++++..+ ..+..++-+|+.|.+.+.+++++.++|+
T Consensus       250 gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~-~~~~~~~igdVrD~~~~~~~~~~~kvd~  328 (588)
T COG1086         250 GKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFP-ELKLRFYIGDVRDRDRVERAMEGHKVDI  328 (588)
T ss_pred             CCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCC-CcceEEEecccccHHHHHHHHhcCCCce
Confidence            39999999999999999999999986 677777655444444444444433 3578889999999999999999888999


Q ss_pred             EEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCCChHHHHHHHHH
Q 025786          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAE  228 (248)
Q Consensus       149 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e  228 (248)
                      |+|.|+.-+.+..+.+|.+.+.+|+.||.++++++.+.+.+++|.+||              +....|.+.||+||..+|
T Consensus       329 VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~V~~~V~iST--------------DKAV~PtNvmGaTKr~aE  394 (588)
T COG1086         329 VFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNGVKKFVLIST--------------DKAVNPTNVMGATKRLAE  394 (588)
T ss_pred             EEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHhCCCEEEEEec--------------CcccCCchHhhHHHHHHH
Confidence            999999988888899999999999999999999999999999999999              345678999999999999


Q ss_pred             HHHHHHhhcCC---CcEEEEe
Q 025786          229 DIILDFSKNSD---MAVLQCH  246 (248)
Q Consensus       229 ~l~~~~~~~~g---i~~~~v~  246 (248)
                      .+++++..+..   -.+++||
T Consensus       395 ~~~~a~~~~~~~~~T~f~~VR  415 (588)
T COG1086         395 KLFQAANRNVSGTGTRFCVVR  415 (588)
T ss_pred             HHHHHHhhccCCCCcEEEEEE
Confidence            99999987533   4555544

>PRK08264 short chain dehydrogenase; Validated

Probab=99.89  E-value=9.5e-22  Score=161.61  Aligned_cols=157  Identities=15%  Similarity=0.087  Sum_probs=118.9

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC-EEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-CCCCE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-NAFDA  148 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-~~iD~  148 (248)
                      ++++||||+|+||+++++.|+++|+ +|++++|+..+.+   +       .+.++.++.+|++|.+++.++++. +++|+
T Consensus         7 ~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~---~-------~~~~~~~~~~D~~~~~~~~~~~~~~~~id~   76 (238)
T PRK08264          7 KVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVT---D-------LGPRVVPLQLDVTDPASVAAAAEAASDVTI   76 (238)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhh---h-------cCCceEEEEecCCCHHHHHHHHHhcCCCCE
Confidence            8999999999999999999999999 9999887543211   1       234688999999999999998876 46999


Q ss_pred             EEEcccc-cccCCCCCCch----hhHhhhHHHHHHHHH----HHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCCCh
Q 025786          149 VMHFAAV-AYVGESTLDPL----KYYHNITSNTLVVLE----SMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINP  219 (248)
Q Consensus       149 li~~Ag~-~~~~~~~~~~~----~~~~~~~~~~~~ll~----~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~  219 (248)
                      |||+||. .......+.+.    ..++.|..+...+++    .+++.+.+++|++||...+.           +..+...
T Consensus        77 vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~-----------~~~~~~~  145 (238)
T PRK08264         77 LVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWV-----------NFPNLGT  145 (238)
T ss_pred             EEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcc-----------CCCCchH
Confidence            9999998 33222222222    334455555555444    45556678999999977653           2344678


Q ss_pred             HHHHHHHHHHHHHHHhhcC---CCcEEEEecC
Q 025786          220 YGKAKKMAEDIILDFSKNS---DMAVLQCHRF  248 (248)
Q Consensus       220 Y~~sK~a~e~l~~~~~~~~---gi~~~~v~Pf  248 (248)
                      |+.+|.+.+.+++.++.++   ++++++++|.
T Consensus       146 y~~sK~a~~~~~~~l~~~~~~~~i~~~~v~pg  177 (238)
T PRK08264        146 YSASKAAAWSLTQALRAELAPQGTRVLGVHPG  177 (238)
T ss_pred             hHHHHHHHHHHHHHHHHHhhhcCeEEEEEeCC
Confidence            9999999999999998774   8999999994

>PRK07806 short chain dehydrogenase; Provisional

Probab=99.89  E-value=7.1e-22  Score=163.32  Aligned_cols=167  Identities=18%  Similarity=0.177  Sum_probs=120.9

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      ++++||||+||||++++++|+++|++|++++|+...  .......++...+.++.++++|++|++++.+++++     ++
T Consensus         7 k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~--~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   84 (248)
T PRK07806          7 KTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAP--RANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEFGG   84 (248)
T ss_pred             cEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchH--hHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            899999999999999999999999999998874321  11222222222234678899999999999888764     47


Q ss_pred             CCEEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHc--CCCEEEEeccceecCCCCCCCCCCCCCCCCCChHHHH
Q 025786          146 FDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARH--GVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKA  223 (248)
Q Consensus       146 iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~--~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~s  223 (248)
                      +|+||||||....  ....+...++.|..++.++++.+.+.  ..++||++||........      ..+.+...+|+.|
T Consensus        85 ~d~vi~~ag~~~~--~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~------~~~~~~~~~Y~~s  156 (248)
T PRK07806         85 LDALVLNASGGME--SGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQAHFIPT------VKTMPEYEPVARS  156 (248)
T ss_pred             CcEEEECCCCCCC--CCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchhhcCcc------ccCCccccHHHHH
Confidence            9999999986422  12234556777888888877777653  236899999854321110      0122336789999


Q ss_pred             HHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          224 KKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       224 K~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      |+++|.+++.++.+   .++++++++|
T Consensus       157 K~a~e~~~~~l~~~~~~~~i~v~~v~p  183 (248)
T PRK07806        157 KRAGEDALRALRPELAEKGIGFVVVSG  183 (248)
T ss_pred             HHHHHHHHHHHHHHhhccCeEEEEeCC
Confidence            99999999999876   5799999876

>PRK07069 short chain dehydrogenase; Validated

Probab=99.89  E-value=7.1e-22  Score=163.47  Aligned_cols=164  Identities=15%  Similarity=0.187  Sum_probs=119.9

Q ss_pred             EEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCC--CCceEEEEccCCCHHHHHHHhhc-----C
Q 025786           72 HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPE--PGRLQFIYADLGDAKAVNKFFSE-----N  144 (248)
Q Consensus        72 ~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~-----~  144 (248)
                      +++||||+|+||+++++.|+++|++|++++|..  .+...+..+++...  ...+..+++|++|.+++.+++++     +
T Consensus         1 ~ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   78 (251)
T PRK07069          1 RAFITGAAGGLGRAIARRMAEQGAKVFLTDIND--AAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMG   78 (251)
T ss_pred             CEEEECCCChHHHHHHHHHHHCCCEEEEEeCCc--chHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence            389999999999999999999999999998752  12222222222111  12345688999999999888765     5


Q ss_pred             CCCEEEEcccccccCCCCCCchh----hHhhhHH----HHHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCC
Q 025786          145 AFDAVMHFAAVAYVGESTLDPLK----YYHNITS----NTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (248)
Q Consensus       145 ~iD~li~~Ag~~~~~~~~~~~~~----~~~~~~~----~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~  216 (248)
                      ++|+||||||........+.+.+    .++.|..    .+..+++.|.+.+.++||++||...+..           .+.
T Consensus        79 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~~~~~-----------~~~  147 (251)
T PRK07069         79 GLSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSVAAFKA-----------EPD  147 (251)
T ss_pred             CccEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChhhccC-----------CCC
Confidence            79999999997654433332333    2334444    4667889998877789999999877632           234


Q ss_pred             CChHHHHHHHHHHHHHHHhhcC-----CCcEEEEecC
Q 025786          217 INPYGKAKKMAEDIILDFSKNS-----DMAVLQCHRF  248 (248)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~~~~~-----gi~~~~v~Pf  248 (248)
                      ...|+.+|++.+.+++.++.++     +++++.++|.
T Consensus       148 ~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~pg  184 (251)
T PRK07069        148 YTAYNASKAAVASLTKSIALDCARRGLDVRCNSIHPT  184 (251)
T ss_pred             CchhHHHHHHHHHHHHHHHHHhcccCCcEEEEEEeec
Confidence            6689999999999999998763     4888999883

>PRK09135 pteridine reductase; Provisional

Probab=99.89  E-value=1.3e-21  Score=161.49  Aligned_cols=165  Identities=22%  Similarity=0.215  Sum_probs=121.7

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcC-CCCceEEEEccCCCHHHHHHHhhc-----C
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFP-EPGRLQFIYADLGDAKAVNKFFSE-----N  144 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~-----~  144 (248)
                      ++++||||+||||++++++|+++|++|++++|+...  ...+..+.+.. .+..+.++.+|++|.+++.++++.     +
T Consensus         7 ~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   84 (249)
T PRK09135          7 KVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAA--EADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAFG   84 (249)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHH--HHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            799999999999999999999999999999874321  11111111111 123578899999999999888875     5


Q ss_pred             CCCEEEEcccccccCCCC----CCchhhHhhhHHHHHHHHHHHHH---cCCCEEEEeccceecCCCCCCCCCCCCCCCCC
Q 025786          145 AFDAVMHFAAVAYVGEST----LDPLKYYHNITSNTLVVLESMAR---HGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (248)
Q Consensus       145 ~iD~li~~Ag~~~~~~~~----~~~~~~~~~~~~~~~~ll~~~~~---~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (248)
                      ++|+||||||........    +..+..++.|..++.++++.+.+   ...+.+++++|...           ..+.++.
T Consensus        85 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~  153 (249)
T PRK09135         85 RLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITDIHA-----------ERPLKGY  153 (249)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeChhh-----------cCCCCCc
Confidence            799999999975433222    23345667888888887777643   22357777766322           2456778


Q ss_pred             ChHHHHHHHHHHHHHHHhhcC--CCcEEEEecC
Q 025786          218 NPYGKAKKMAEDIILDFSKNS--DMAVLQCHRF  248 (248)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~~~~~--gi~~~~v~Pf  248 (248)
                      .+|+.||+++|.+++.++.++  ++++++++|+
T Consensus       154 ~~Y~~sK~~~~~~~~~l~~~~~~~i~~~~v~pg  186 (249)
T PRK09135        154 PVYCAAKAALEMLTRSLALELAPEVRVNAVAPG  186 (249)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHCCCCeEEEEEec
Confidence            899999999999999999885  5999999994

>PRK06484 short chain dehydrogenase; Validated

Probab=99.89  E-value=1e-21  Score=179.09  Aligned_cols=160  Identities=23%  Similarity=0.236  Sum_probs=119.4

Q ss_pred             CceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----
Q 025786           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (248)
Q Consensus        69 ~~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----  143 (248)
                      .+|+++||||++|||++++++|+++|++|++++|+..   .+.+..++.   +.++..+.+|++|++++++++++     
T Consensus       268 ~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~---~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~  341 (520)
T PRK06484        268 SPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAE---GAKKLAEAL---GDEHLSVQADITDEAAVESAFAQIQARW  341 (520)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHH---HHHHHHHHh---CCceeEEEccCCCHHHHHHHHHHHHHHc
Confidence            3499999999999999999999999999999986432   222222222   24567789999999999888875     


Q ss_pred             CCCCEEEEccccccc-CCCCCCc----hhhHhhhHHHHHH----HHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCC
Q 025786          144 NAFDAVMHFAAVAYV-GESTLDP----LKYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQ  214 (248)
Q Consensus       144 ~~iD~li~~Ag~~~~-~~~~~~~----~~~~~~~~~~~~~----ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~  214 (248)
                      +++|+||||||.... ....+.+    +..++.|+.++..    +++.|  .+.++||++||.+.+.           +.
T Consensus       342 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~--~~~g~iv~isS~~~~~-----------~~  408 (520)
T PRK06484        342 GRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLM--SQGGVIVNLGSIASLL-----------AL  408 (520)
T ss_pred             CCCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHh--ccCCEEEEECchhhcC-----------CC
Confidence            689999999997532 2222222    3334556655544    44555  2347999999977652           34


Q ss_pred             CCCChHHHHHHHHHHHHHHHhhcC---CCcEEEEec
Q 025786          215 APINPYGKAKKMAEDIILDFSKNS---DMAVLQCHR  247 (248)
Q Consensus       215 ~~~~~Y~~sK~a~e~l~~~~~~~~---gi~~~~v~P  247 (248)
                      ++...|+.||++.+.+++.++.++   ||++++|+|
T Consensus       409 ~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~P  444 (520)
T PRK06484        409 PPRNAYCASKAAVTMLSRSLACEWAPAGIRVNTVAP  444 (520)
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEe
Confidence            457789999999999999999874   799999998

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.89  E-value=1e-21  Score=163.57  Aligned_cols=160  Identities=16%  Similarity=0.107  Sum_probs=114.1

Q ss_pred             eEEEEecC--CchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----
Q 025786           71 THVLVTGG--AGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (248)
Q Consensus        71 k~vlITGa--sg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----  143 (248)
                      |+++||||  ++|||++++++|+++|++|++++|+. ..+...+..+++   +.++.++++|++|++++++++++     
T Consensus         8 k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~-~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~i~~~~~~~~~~~   83 (256)
T PRK07889          8 KRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGR-ALRLTERIAKRL---PEPAPVLELDVTNEEHLASLADRVREHV   83 (256)
T ss_pred             CEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCcc-chhHHHHHHHhc---CCCCcEEeCCCCCHHHHHHHHHHHHHHc
Confidence            89999999  89999999999999999999988642 111122222222   23577899999999999888765     


Q ss_pred             CCCCEEEEcccccccC----CCCCCchhh----HhhhHHH----HHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCC
Q 025786          144 NAFDAVMHFAAVAYVG----ESTLDPLKY----YHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEE  211 (248)
Q Consensus       144 ~~iD~li~~Ag~~~~~----~~~~~~~~~----~~~~~~~----~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~  211 (248)
                      +++|+||||||+....    +..+.+.+.    ++.|..+    ++.+++.|++  .++||++||....           
T Consensus        84 g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~--~g~Iv~is~~~~~-----------  150 (256)
T PRK07889         84 DGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNE--GGSIVGLDFDATV-----------  150 (256)
T ss_pred             CCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhccc--CceEEEEeecccc-----------
Confidence            6899999999976321    122222222    3445444    3346666653  3689998864321           


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          212 TPQAPINPYGKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       212 ~~~~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                       +.+.+..|+.||++.+.+++.++.|   +|+++++|+|-
T Consensus       151 -~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG  189 (256)
T PRK07889        151 -AWPAYDWMGVAKAALESTNRYLARDLGPRGIRVNLVAAG  189 (256)
T ss_pred             -cCCccchhHHHHHHHHHHHHHHHHHhhhcCeEEEeeccC
Confidence             2234667999999999999999987   58999999983

>TIGR02415 23BDH acetoin reductases

Probab=99.89  E-value=1e-21  Score=162.89  Aligned_cols=163  Identities=21%  Similarity=0.233  Sum_probs=119.5

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      |+++||||+|+||.+++++|+++|++|++++|+...   ..+..+++...+.++.++.+|++|++++.++++.     ++
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~---~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~   77 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEET---AKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGG   77 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHH---HHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            579999999999999999999999999999865332   2222233322345688899999999999887764     57


Q ss_pred             CCEEEEcccccccCCCCCCch----hhHhhhHHHHH----HHHHHHHHcC-CCEEEEeccceecCCCCCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYVGESTLDPL----KYYHNITSNTL----VVLESMARHG-VDTLIYSSTCATYGEPEKMPITEETPQAP  216 (248)
Q Consensus       146 iD~li~~Ag~~~~~~~~~~~~----~~~~~~~~~~~----~ll~~~~~~~-~~~iV~~SS~~~~g~~~~~~~~e~~~~~~  216 (248)
                      +|+||||||.....+..+.+.    ..++.|+.++.    .+++.|.+.+ .++||++||.....           +.+.
T Consensus        78 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~-----------~~~~  146 (254)
T TIGR02415        78 FDVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHE-----------GNPI  146 (254)
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcC-----------CCCC
Confidence            999999999764433323222    33555555544    3555665544 36999999965542           2234


Q ss_pred             CChHHHHHHHHHHHHHHHhhcC---CCcEEEEec
Q 025786          217 INPYGKAKKMAEDIILDFSKNS---DMAVLQCHR  247 (248)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~~~~~---gi~~~~v~P  247 (248)
                      ..+|+.||++.+.+++.++.++   ++++++++|
T Consensus       147 ~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~P  180 (254)
T TIGR02415       147 LSAYSSTKFAVRGLTQTAAQELAPKGITVNAYCP  180 (254)
T ss_pred             CcchHHHHHHHHHHHHHHHHHhcccCeEEEEEec
Confidence            7789999999999999998874   799999998

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK09072 short chain dehydrogenase; Provisional

Probab=99.89  E-value=1.8e-21  Score=162.42  Aligned_cols=162  Identities=16%  Similarity=0.173  Sum_probs=119.8

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc----CCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----NAF  146 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~----~~i  146 (248)
                      ++++||||+|+||++++++|+++|++|++++|+...   ..+...++ ..+.++.++.+|++|.+++.++++.    +++
T Consensus         6 ~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~---~~~~~~~~-~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~i   81 (263)
T PRK09072          6 KRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEK---LEALAARL-PYPGRHRWVVADLTSEAGREAVLARAREMGGI   81 (263)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHH---HHHHHHHH-hcCCceEEEEccCCCHHHHHHHHHHHHhcCCC
Confidence            899999999999999999999999999999875332   22222333 2245788999999999998887764    579


Q ss_pred             CEEEEcccccccCCCCCCc----hhhHhhhHHHHHHH----HHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCCC
Q 025786          147 DAVMHFAAVAYVGESTLDP----LKYYHNITSNTLVV----LESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPIN  218 (248)
Q Consensus       147 D~li~~Ag~~~~~~~~~~~----~~~~~~~~~~~~~l----l~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~  218 (248)
                      |+||||||........+.+    ...++.|..++..+    ++.+.+.+.++||++||...+.           +.+...
T Consensus        82 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~-----------~~~~~~  150 (263)
T PRK09072         82 NVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSI-----------GYPGYA  150 (263)
T ss_pred             CEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCc-----------CCCCcc
Confidence            9999999975443322222    33445666665544    4455555567899998865541           223467


Q ss_pred             hHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          219 PYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       219 ~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      .|+.+|++.+.+++.++.+   .++++++++|
T Consensus       151 ~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~P  182 (263)
T PRK09072        151 SYCASKFALRGFSEALRRELADTGVRVLYLAP  182 (263)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcccCcEEEEEec
Confidence            8999999999999999977   5799999988

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=99.89  E-value=1.3e-21  Score=161.75  Aligned_cols=165  Identities=16%  Similarity=0.200  Sum_probs=115.7

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~  144 (248)
                      +|+++||||+||||+++++.|+++|++|+++.+.  +.+...+...++...+.++.++++|++|.+++.+++++     +
T Consensus         2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   79 (248)
T PRK06947          2 RKVVLITGASRGIGRATAVLAAARGWSVGINYAR--DAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFG   79 (248)
T ss_pred             CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCC--CHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcC
Confidence            4799999999999999999999999999876532  22222222222322245788999999999999887764     5


Q ss_pred             CCCEEEEcccccccCC-CCCCc----hhhHhhhHHHHHHH----HHHHHHcC---CCEEEEeccceec-CCCCCCCCCCC
Q 025786          145 AFDAVMHFAAVAYVGE-STLDP----LKYYHNITSNTLVV----LESMARHG---VDTLIYSSTCATY-GEPEKMPITEE  211 (248)
Q Consensus       145 ~iD~li~~Ag~~~~~~-~~~~~----~~~~~~~~~~~~~l----l~~~~~~~---~~~iV~~SS~~~~-g~~~~~~~~e~  211 (248)
                      ++|+||||||...... ..+.+    +..+..|..++..+    ++.+...+   .++||++||.+.+ +..        
T Consensus        80 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~--------  151 (248)
T PRK06947         80 RLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGSP--------  151 (248)
T ss_pred             CCCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCCC--------
Confidence            7999999999754321 11222    23355565554444    44443332   3579999997654 211        


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHhhcC---CCcEEEEec
Q 025786          212 TPQAPINPYGKAKKMAEDIILDFSKNS---DMAVLQCHR  247 (248)
Q Consensus       212 ~~~~~~~~Y~~sK~a~e~l~~~~~~~~---gi~~~~v~P  247 (248)
                         .....|+.||++.+.++++++.++   |+++++++|
T Consensus       152 ---~~~~~Y~~sK~~~~~~~~~la~~~~~~~i~v~~i~P  187 (248)
T PRK06947        152 ---NEYVDYAGSKGAVDTLTLGLAKELGPHGVRVNAVRP  187 (248)
T ss_pred             ---CCCcccHhhHHHHHHHHHHHHHHhhhhCcEEEEEec
Confidence               123579999999999999999874   799999998

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=99.89  E-value=6.8e-22  Score=165.48  Aligned_cols=165  Identities=19%  Similarity=0.183  Sum_probs=113.2

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcC-CCCceEEEEccCCCHHHH----HHHhhc--
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFP-EPGRLQFIYADLGDAKAV----NKFFSE--  143 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~----~~~~~~--  143 (248)
                      ++++||||++|||++++++|+++|++|++++|..  .+.+.+..+++.. .+.++.++.+|++|.+++    +++++.  
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~   79 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRS--AAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACF   79 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCc--HHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHH
Confidence            6899999999999999999999999999876532  2222222233311 134567789999998755    333332  


Q ss_pred             ---CCCCEEEEcccccccCCCCC-C--------------chhhHhhhHHHHHH----HHHHHHHc------CCCEEEEec
Q 025786          144 ---NAFDAVMHFAAVAYVGESTL-D--------------PLKYYHNITSNTLV----VLESMARH------GVDTLIYSS  195 (248)
Q Consensus       144 ---~~iD~li~~Ag~~~~~~~~~-~--------------~~~~~~~~~~~~~~----ll~~~~~~------~~~~iV~~S  195 (248)
                         +++|+||||||.....+..+ +              ..+.++.|..+...    +++.++..      ..++||++|
T Consensus        80 ~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~  159 (267)
T TIGR02685        80 RAFGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLC  159 (267)
T ss_pred             HccCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEeh
Confidence               57999999999754332211 1              12335556555444    44444332      124788888


Q ss_pred             cceecCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          196 TCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       196 S~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                      |....           .+.++..+|+.||++++++++.++.+   .|+++++|+|.
T Consensus       160 s~~~~-----------~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG  204 (267)
T TIGR02685       160 DAMTD-----------QPLLGFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPG  204 (267)
T ss_pred             hhhcc-----------CCCcccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecC
Confidence            86543           24455778999999999999999988   68999999983

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=99.89  E-value=1.4e-21  Score=160.75  Aligned_cols=164  Identities=20%  Similarity=0.167  Sum_probs=119.5

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      |++|||||+|+||++++++|+++|++|+++.|.  ..+...+...+......++.++.+|++|++++.+++++     ++
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~--~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   78 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGP--NEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGP   78 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC--CHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            589999999999999999999999999988762  22222222222222235688999999999999887764     57


Q ss_pred             CCEEEEcccccccCCCCCCchh----hHhhhHHHH----HHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYVGESTLDPLK----YYHNITSNT----LVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (248)
Q Consensus       146 iD~li~~Ag~~~~~~~~~~~~~----~~~~~~~~~----~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (248)
                      +|+||||||........+.+.+    .+..|..+.    ..+++.|++.+.++||++||.....           +..+.
T Consensus        79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~-----------~~~~~  147 (242)
T TIGR01829        79 IDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISSVNGQK-----------GQFGQ  147 (242)
T ss_pred             CcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcC-----------CCCCc
Confidence            9999999997643332222223    334455543    3367777777778999999965431           22346


Q ss_pred             ChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          218 NPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      ..|+.+|.+.+.+++.++.+   .|++++.++|
T Consensus       148 ~~y~~sk~a~~~~~~~la~~~~~~~i~v~~i~p  180 (242)
T TIGR01829       148 TNYSAAKAGMIGFTKALAQEGATKGVTVNTISP  180 (242)
T ss_pred             chhHHHHHHHHHHHHHHHHHhhhhCeEEEEEee
Confidence            68999999999999999876   4899999988

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PLN00015 protochlorophyllide reductase

Probab=99.89  E-value=1.2e-21  Score=167.42  Aligned_cols=170  Identities=14%  Similarity=0.127  Sum_probs=119.0

Q ss_pred             EEecCCchhHHHHHHHHHHCC-CEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CCCC
Q 025786           74 LVTGGAGYIGSHAALRLLKDS-YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NAFD  147 (248)
Q Consensus        74 lITGasg~IG~~la~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~iD  147 (248)
                      +||||++|||.+++++|+++| ++|++++|+..   ...+...++.....++.++++|++|.+++++++++     +++|
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~---~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD   77 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACRDFL---KAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLD   77 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHH---HHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCC
Confidence            699999999999999999999 99999886432   22333333322234678899999999999888764     5799


Q ss_pred             EEEEcccccccC-CCCC----CchhhHhhhHHH----HHHHHHHHHHcC--CCEEEEeccceecCCCC-C--CC------
Q 025786          148 AVMHFAAVAYVG-ESTL----DPLKYYHNITSN----TLVVLESMARHG--VDTLIYSSTCATYGEPE-K--MP------  207 (248)
Q Consensus       148 ~li~~Ag~~~~~-~~~~----~~~~~~~~~~~~----~~~ll~~~~~~~--~~~iV~~SS~~~~g~~~-~--~~------  207 (248)
                      +||||||+.... ...+    ..+..++.|+.+    ++.+++.|.+.+  .++||++||..++-... .  .+      
T Consensus        78 ~lInnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~  157 (308)
T PLN00015         78 VLVCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGD  157 (308)
T ss_pred             EEEECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccCCCccchhh
Confidence            999999975322 2111    223345566555    445688887765  57999999976641100 0  00      


Q ss_pred             ----------------CCCCCCCCCCChHHHHHHHHHHHHHHHhhc----CCCcEEEEec
Q 025786          208 ----------------ITEETPQAPINPYGKAKKMAEDIILDFSKN----SDMAVLQCHR  247 (248)
Q Consensus       208 ----------------~~e~~~~~~~~~Y~~sK~a~e~l~~~~~~~----~gi~~~~v~P  247 (248)
                                      ..+ ....+...|+.||++.+.+++.++++    .|+.+++++|
T Consensus       158 ~~~~~~~~~~~~~~~~~~~-~~~~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~P  216 (308)
T PLN00015        158 LRGLAGGLNGLNSSAMIDG-GEFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYP  216 (308)
T ss_pred             hhhhhcccCCccchhhccc-cCCcHHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecC
Confidence                            001 12345678999999988888988876    3799999998

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=99.89  E-value=1.3e-22  Score=171.38  Aligned_cols=148  Identities=28%  Similarity=0.364  Sum_probs=116.3

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li  150 (248)
                      |+||||||+|+||.++.+.|.++|++|+.++|.                        .+|++|.+++.+++++.++|+||
T Consensus         1 MriLI~GasG~lG~~l~~~l~~~~~~v~~~~r~------------------------~~dl~d~~~~~~~~~~~~pd~Vi   56 (286)
T PF04321_consen    1 MRILITGASGFLGSALARALKERGYEVIATSRS------------------------DLDLTDPEAVAKLLEAFKPDVVI   56 (286)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTTSEEEEEESTT------------------------CS-TTSHHHHHHHHHHH--SEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHhhCCCEEEEeCch------------------------hcCCCCHHHHHHHHHHhCCCeEe
Confidence            689999999999999999999999999987641                        68999999999999887899999


Q ss_pred             EcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCCChHHHHHHHHHHH
Q 025786          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDI  230 (248)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e~l  230 (248)
                      |+||.......+.+++..+..|..++.++++.+.+.+. ++||+||..+|++....+++|+++..|.+.||.+|..+|+.
T Consensus        57 n~aa~~~~~~ce~~p~~a~~iN~~~~~~la~~~~~~~~-~li~~STd~VFdG~~~~~y~E~d~~~P~~~YG~~K~~~E~~  135 (286)
T PF04321_consen   57 NCAAYTNVDACEKNPEEAYAINVDATKNLAEACKERGA-RLIHISTDYVFDGDKGGPYTEDDPPNPLNVYGRSKLEGEQA  135 (286)
T ss_dssp             E------HHHHHHSHHHHHHHHTHHHHHHHHHHHHCT--EEEEEEEGGGS-SSTSSSB-TTS----SSHHHHHHHHHHHH
T ss_pred             ccceeecHHhhhhChhhhHHHhhHHHHHHHHHHHHcCC-cEEEeeccEEEcCCcccccccCCCCCCCCHHHHHHHHHHHH
Confidence            99998766666778889999999999999999998874 99999999999877778899999999999999999999999


Q ss_pred             HHHHhhcCCCcEEEEec
Q 025786          231 ILDFSKNSDMAVLQCHR  247 (248)
Q Consensus       231 ~~~~~~~~gi~~~~v~P  247 (248)
                      ++....    ...++|+
T Consensus       136 v~~~~~----~~~IlR~  148 (286)
T PF04321_consen  136 VRAACP----NALILRT  148 (286)
T ss_dssp             HHHH-S----SEEEEEE
T ss_pred             HHHhcC----CEEEEec
Confidence            988443    4566664

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>PRK12742 oxidoreductase; Provisional

Probab=99.89  E-value=2.5e-21  Score=158.92  Aligned_cols=160  Identities=19%  Similarity=0.218  Sum_probs=114.4

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-CCCCEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-NAFDAV  149 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-~~iD~l  149 (248)
                      |+++||||+|+||++++++|+++|++|+++++.  +.+...+..++.     .+.++.+|++|.+++.+++++ +++|+|
T Consensus         7 k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~--~~~~~~~l~~~~-----~~~~~~~D~~~~~~~~~~~~~~~~id~l   79 (237)
T PRK12742          7 KKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAG--SKDAAERLAQET-----GATAVQTDSADRDAVIDVVRKSGALDIL   79 (237)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEecCC--CHHHHHHHHHHh-----CCeEEecCCCCHHHHHHHHHHhCCCcEE
Confidence            899999999999999999999999999887642  222222222221     256788999999999888876 679999


Q ss_pred             EEcccccccCCCCC----CchhhHhhhHHHHHHHHHHHHHc--CCCEEEEeccceecCCCCCCCCCCCCCCCCCChHHHH
Q 025786          150 MHFAAVAYVGESTL----DPLKYYHNITSNTLVVLESMARH--GVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKA  223 (248)
Q Consensus       150 i~~Ag~~~~~~~~~----~~~~~~~~~~~~~~~ll~~~~~~--~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~s  223 (248)
                      |||||........+    ..+..++.|..+...++..+.+.  ..++||++||....          ..+.++...|+.+
T Consensus        80 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~----------~~~~~~~~~Y~~s  149 (237)
T PRK12742         80 VVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNGD----------RMPVAGMAAYAAS  149 (237)
T ss_pred             EECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEeccccc----------cCCCCCCcchHHh
Confidence            99999754333222    22334455555555444333221  24699999996542          1234557789999


Q ss_pred             HHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          224 KKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       224 K~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      |++.+.+++.++.+   .|+++++++|
T Consensus       150 Kaa~~~~~~~la~~~~~~gi~v~~v~P  176 (237)
T PRK12742        150 KSALQGMARGLARDFGPRGITINVVQP  176 (237)
T ss_pred             HHHHHHHHHHHHHHHhhhCeEEEEEec
Confidence            99999999999887   4799999998

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=99.89  E-value=3e-21  Score=159.09  Aligned_cols=161  Identities=17%  Similarity=0.106  Sum_probs=116.8

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~  144 (248)
                      +++++||||+|+||+++++.|+++|+.|++.+|..   +.+.+.....   +.++.++.+|++|.+++++++++     +
T Consensus         6 ~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~---~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   79 (245)
T PRK12936          6 GRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRV---EKLEALAAEL---GERVKIFPANLSDRDEVKALGQKAEADLE   79 (245)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCH---HHHHHHHHHh---CCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            38999999999999999999999999988877532   2222222222   24678899999999999888764     5


Q ss_pred             CCCEEEEcccccccCCCCCC----chhhHhhhHHHHHHH----HHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCC
Q 025786          145 AFDAVMHFAAVAYVGESTLD----PLKYYHNITSNTLVV----LESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (248)
Q Consensus       145 ~iD~li~~Ag~~~~~~~~~~----~~~~~~~~~~~~~~l----l~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~  216 (248)
                      ++|+||||||..........    .+..++.|+.+...+    ++.+.+++.++||++||...+.           +.+.
T Consensus        80 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~-----------~~~~  148 (245)
T PRK12936         80 GVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVT-----------GNPG  148 (245)
T ss_pred             CCCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCc-----------CCCC
Confidence            79999999997644332222    233345555554444    4444455667999999965542           1223


Q ss_pred             CChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          217 INPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      ...|+.+|.+.+.+++.++.+   .|+++++++|
T Consensus       149 ~~~Y~~sk~a~~~~~~~la~~~~~~~i~v~~i~p  182 (245)
T PRK12936        149 QANYCASKAGMIGFSKSLAQEIATRNVTVNCVAP  182 (245)
T ss_pred             CcchHHHHHHHHHHHHHHHHHhhHhCeEEEEEEE
Confidence            567999999999999999877   4799999998

>PRK06123 short chain dehydrogenase; Provisional

Probab=99.88  E-value=1.7e-21  Score=161.04  Aligned_cols=165  Identities=18%  Similarity=0.232  Sum_probs=115.9

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      ++++||||+|+||++++++|+++|++|+++++..  .+...+....+...+.++.++++|++|.+++.+++++     ++
T Consensus         3 ~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   80 (248)
T PRK06123          3 KVMIITGASRGIGAATALLAAERGYAVCLNYLRN--RDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGR   80 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCeEEEecCCC--HHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCC
Confidence            6899999999999999999999999998876422  1222222222322234678899999999999888875     57


Q ss_pred             CCEEEEcccccccC-CCCC----CchhhHhhhHHHHHHHH----HHHHHcC---CCEEEEeccceec-CCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYVG-ESTL----DPLKYYHNITSNTLVVL----ESMARHG---VDTLIYSSTCATY-GEPEKMPITEET  212 (248)
Q Consensus       146 iD~li~~Ag~~~~~-~~~~----~~~~~~~~~~~~~~~ll----~~~~~~~---~~~iV~~SS~~~~-g~~~~~~~~e~~  212 (248)
                      +|+||||||..... ...+    +....++.|+.++..++    +.+.+..   .++||++||.+.+ +..         
T Consensus        81 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~---------  151 (248)
T PRK06123         81 LDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSP---------  151 (248)
T ss_pred             CCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCC---------
Confidence            99999999975432 1222    22244556666655544    4443331   3579999997553 211         


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHhhcC---CCcEEEEecC
Q 025786          213 PQAPINPYGKAKKMAEDIILDFSKNS---DMAVLQCHRF  248 (248)
Q Consensus       213 ~~~~~~~Y~~sK~a~e~l~~~~~~~~---gi~~~~v~Pf  248 (248)
                        .....|+.||++.+.+++.++.++   |+++++++|.
T Consensus       152 --~~~~~Y~~sKaa~~~~~~~la~~~~~~~i~v~~i~pg  188 (248)
T PRK06123        152 --GEYIDYAASKGAIDTMTIGLAKEVAAEGIRVNAVRPG  188 (248)
T ss_pred             --CCccchHHHHHHHHHHHHHHHHHhcccCeEEEEEecC
Confidence              112469999999999999998874   8999999995

>PRK07832 short chain dehydrogenase; Provisional

Probab=99.88  E-value=1.7e-21  Score=163.49  Aligned_cols=164  Identities=18%  Similarity=0.150  Sum_probs=116.5

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCC-ceEEEEccCCCHHHHHHHhhc-----C
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPG-RLQFIYADLGDAKAVNKFFSE-----N  144 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~-----~  144 (248)
                      |+++||||+||||++++++|+++|++|++++|+....   .+..+++...+. ...++.+|++|++++.+++++     +
T Consensus         1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~---~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   77 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGL---AQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHG   77 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH---HHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcC
Confidence            4799999999999999999999999999988654322   222222221122 345678999999998887765     5


Q ss_pred             CCCEEEEcccccccCCCCCCch----hhHhhhHHHHHH----HHHHHHHc-CCCEEEEeccceecCCCCCCCCCCCCCCC
Q 025786          145 AFDAVMHFAAVAYVGESTLDPL----KYYHNITSNTLV----VLESMARH-GVDTLIYSSTCATYGEPEKMPITEETPQA  215 (248)
Q Consensus       145 ~iD~li~~Ag~~~~~~~~~~~~----~~~~~~~~~~~~----ll~~~~~~-~~~~iV~~SS~~~~g~~~~~~~~e~~~~~  215 (248)
                      ++|+||||||........+.+.    ..++.|..+...    +++.|.+. ..++||++||...+.           +.+
T Consensus        78 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~-----------~~~  146 (272)
T PRK07832         78 SMDVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLV-----------ALP  146 (272)
T ss_pred             CCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccC-----------CCC
Confidence            7999999999754333333333    334555555444    44445443 347999999976541           233


Q ss_pred             CCChHHHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          216 PINPYGKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                      ....|+.||++.+.+++.++.+   +++++++++|.
T Consensus       147 ~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg  182 (272)
T PRK07832        147 WHAAYSASKFGLRGLSEVLRFDLARHGIGVSVVVPG  182 (272)
T ss_pred             CCcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecC
Confidence            4668999999999999999865   68999999983

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=99.88  E-value=1.7e-21  Score=160.27  Aligned_cols=162  Identities=18%  Similarity=0.146  Sum_probs=117.5

Q ss_pred             EEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CCCC
Q 025786           73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NAFD  147 (248)
Q Consensus        73 vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~iD  147 (248)
                      |+||||+||||.+++++|+++|++|++++|...  +...+..+++...+.++.++++|++|.+++.+++++     +++|
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~--~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~   78 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGR--SDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYY   78 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCH--HHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            689999999999999999999999998876422  222222333322345788999999999999888765     5799


Q ss_pred             EEEEcccccccCCCC----CCchhhHhhhHHHHHHHHHH-----HHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCCC
Q 025786          148 AVMHFAAVAYVGEST----LDPLKYYHNITSNTLVVLES-----MARHGVDTLIYSSTCATYGEPEKMPITEETPQAPIN  218 (248)
Q Consensus       148 ~li~~Ag~~~~~~~~----~~~~~~~~~~~~~~~~ll~~-----~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~  218 (248)
                      ++|||||........    ++.+..++.|..++..++..     +.+.+.++||++||...+.           +.++..
T Consensus        79 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~-----------~~~~~~  147 (239)
T TIGR01831        79 GVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGVM-----------GNRGQV  147 (239)
T ss_pred             EEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhhcc-----------CCCCCc
Confidence            999999976433322    22333455666665555443     3334557999999966542           233467


Q ss_pred             hHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          219 PYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       219 ~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      .|+.+|++.+.+++.++.+   .|++++.++|
T Consensus       148 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~P  179 (239)
T TIGR01831       148 NYSAAKAGLIGATKALAVELAKRKITVNCIAP  179 (239)
T ss_pred             chHHHHHHHHHHHHHHHHHHhHhCeEEEEEEE
Confidence            8999999999999999877   4899999998

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.88  E-value=1.5e-21  Score=182.74  Aligned_cols=164  Identities=15%  Similarity=0.143  Sum_probs=124.5

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~  144 (248)
                      +|+++||||+||||++++++|+++|++|++++|+...   +.+..+++...+.++.++.+|++|.+++++++++     +
T Consensus       371 ~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~---~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g  447 (657)
T PRK07201        371 GKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEA---LDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEHG  447 (657)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHH---HHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence            3899999999999999999999999999999875432   2232233322245788999999999999888875     5


Q ss_pred             CCCEEEEcccccccCCCC------CCchhhHhhhHHHHH----HHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCC
Q 025786          145 AFDAVMHFAAVAYVGEST------LDPLKYYHNITSNTL----VVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQ  214 (248)
Q Consensus       145 ~iD~li~~Ag~~~~~~~~------~~~~~~~~~~~~~~~----~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~  214 (248)
                      ++|+||||||........      +..+..++.|+.++.    .+++.|++.+.++||++||.+++.           +.
T Consensus       448 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~  516 (657)
T PRK07201        448 HVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQT-----------NA  516 (657)
T ss_pred             CCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhhcC-----------CC
Confidence            799999999975332211      122344556665543    457777777778999999988774           23


Q ss_pred             CCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          215 APINPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       215 ~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      +....|+.||++.+.+++.++.+   .|+++++|+|
T Consensus       517 ~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~p  552 (657)
T PRK07201        517 PRFSAYVASKAALDAFSDVAASETLSDGITFTTIHM  552 (657)
T ss_pred             CCcchHHHHHHHHHHHHHHHHHHHHhhCCcEEEEEC
Confidence            34678999999999999999987   4899999998

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=99.88  E-value=5.5e-22  Score=160.77  Aligned_cols=166  Identities=28%  Similarity=0.441  Sum_probs=137.3

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li  150 (248)
                      ++|+||||.||||+|||..|..+|++|+++|..-......   +... ....+++.+..|+..+     ++.  .+|.|+
T Consensus        28 lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n---~~~~-~~~~~fel~~hdv~~p-----l~~--evD~Iy   96 (350)
T KOG1429|consen   28 LRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKEN---LEHW-IGHPNFELIRHDVVEP-----LLK--EVDQIY   96 (350)
T ss_pred             cEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhh---cchh-ccCcceeEEEeechhH-----HHH--Hhhhhh
Confidence            8999999999999999999999999999998643332211   1111 1234677788887655     444  579999


Q ss_pred             EcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCC-----CCCCCChHHHHHH
Q 025786          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEET-----PQAPINPYGKAKK  225 (248)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~-----~~~~~~~Y~~sK~  225 (248)
                      |+|+...+......+.+.+..|..++.+.+-.+++-+ +|+++.||+.+||++...|..|+.     |..|.+.|...|.
T Consensus        97 hLAapasp~~y~~npvktIktN~igtln~lglakrv~-aR~l~aSTseVYgdp~~hpq~e~ywg~vnpigpr~cydegKr  175 (350)
T KOG1429|consen   97 HLAAPASPPHYKYNPVKTIKTNVIGTLNMLGLAKRVG-ARFLLASTSEVYGDPLVHPQVETYWGNVNPIGPRSCYDEGKR  175 (350)
T ss_pred             hhccCCCCcccccCccceeeecchhhHHHHHHHHHhC-ceEEEeecccccCCcccCCCccccccccCcCCchhhhhHHHH
Confidence            9999988888888899999999999999999998877 799999999999987666666554     4567889999999


Q ss_pred             HHHHHHHHHhhcCCCcEEEEecC
Q 025786          226 MAEDIILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       226 a~e~l~~~~~~~~gi~~~~v~Pf  248 (248)
                      .+|.|+.++.++.|+.+.|.|+|
T Consensus       176 ~aE~L~~~y~k~~giE~rIaRif  198 (350)
T KOG1429|consen  176 VAETLCYAYHKQEGIEVRIARIF  198 (350)
T ss_pred             HHHHHHHHhhcccCcEEEEEeee
Confidence            99999999999999999999998

>PRK12744 short chain dehydrogenase; Provisional

Probab=99.88  E-value=1.3e-21  Score=162.84  Aligned_cols=166  Identities=16%  Similarity=0.139  Sum_probs=116.2

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCC-CcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSR-GNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~  144 (248)
                      |+++||||+||||+++++.|+++|++|+++++... ..+...+..+++...+.++.++++|++|++++++++++     +
T Consensus         9 k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   88 (257)
T PRK12744          9 KVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKAAFG   88 (257)
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHHhhC
Confidence            89999999999999999999999999777765432 22223333333322234688899999999999988875     5


Q ss_pred             CCCEEEEcccccccCCCCCC----chhhHhhhHHHHHHHHHHHHHc--CCCEEEEe-ccceecCCCCCCCCCCCCCCCCC
Q 025786          145 AFDAVMHFAAVAYVGESTLD----PLKYYHNITSNTLVVLESMARH--GVDTLIYS-STCATYGEPEKMPITEETPQAPI  217 (248)
Q Consensus       145 ~iD~li~~Ag~~~~~~~~~~----~~~~~~~~~~~~~~ll~~~~~~--~~~~iV~~-SS~~~~g~~~~~~~~e~~~~~~~  217 (248)
                      ++|+||||||........+.    .+..++.|..++..++..+.+.  ..++++++ ||...-            +.+..
T Consensus        89 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~~ss~~~~------------~~~~~  156 (257)
T PRK12744         89 RPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTLVTSLLGA------------FTPFY  156 (257)
T ss_pred             CCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEEEecchhcc------------cCCCc
Confidence            79999999997543332222    2334455666665555555432  23466665 443221            12335


Q ss_pred             ChHHHHHHHHHHHHHHHhhcC---CCcEEEEecC
Q 025786          218 NPYGKAKKMAEDIILDFSKNS---DMAVLQCHRF  248 (248)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~~~~~---gi~~~~v~Pf  248 (248)
                      ..|+.||++.+.++++++.++   |+++++++|.
T Consensus       157 ~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg  190 (257)
T PRK12744        157 SAYAGSKAPVEHFTRAASKEFGARGISVTAVGPG  190 (257)
T ss_pred             ccchhhHHHHHHHHHHHHHHhCcCceEEEEEecC
Confidence            789999999999999999884   6999999984

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.88  E-value=2.3e-22  Score=167.06  Aligned_cols=159  Identities=27%  Similarity=0.361  Sum_probs=115.3

Q ss_pred             EEEecCCchhHHHHHHHHHHCCC-EEEEEecCCCCcchhhhhhhhhcCCCCce----EEEEccCCCHHHHHHHhhcCCCC
Q 025786           73 VLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRL----QFIYADLGDAKAVNKFFSENAFD  147 (248)
Q Consensus        73 vlITGasg~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~----~~~~~Dl~~~~~~~~~~~~~~iD  147 (248)
                      ||||||+|.||+++|++|++.+. +++++|++..+.....+.+....+ ..++    ..+.+|+.|.+.+..++++.++|
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~-~~~v~~~~~~vigDvrd~~~l~~~~~~~~pd   79 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFP-DPKVRFEIVPVIGDVRDKERLNRIFEEYKPD   79 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC---TTCEEEEE--CTSCCHHHHHHHHTT--T-S
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhccc-ccCcccccCceeecccCHHHHHHHHhhcCCC
Confidence            79999999999999999999985 789998654333333333322222 1233    34578999999999999988999


Q ss_pred             EEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCCChHHHHHHHH
Q 025786          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMA  227 (248)
Q Consensus       148 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~  227 (248)
                      +|||.|+.-+.+..+..+.+.+++|+.+|.++++++.+.+.+++|++||-              ....|.+.||+||..+
T Consensus        80 iVfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~~v~~~v~ISTD--------------KAv~PtnvmGatKrla  145 (293)
T PF02719_consen   80 IVFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEHGVERFVFISTD--------------KAVNPTNVMGATKRLA  145 (293)
T ss_dssp             EEEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHTT-SEEEEEEEC--------------GCSS--SHHHHHHHHH
T ss_pred             EEEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEcccc--------------ccCCCCcHHHHHHHHH
Confidence            99999998777777889999999999999999999999999999999993              3456789999999999


Q ss_pred             HHHHHHHhhcC---CCcEEEEe
Q 025786          228 EDIILDFSKNS---DMAVLQCH  246 (248)
Q Consensus       228 e~l~~~~~~~~---gi~~~~v~  246 (248)
                      |+++..++...   +..+++||
T Consensus       146 E~l~~~~~~~~~~~~t~f~~VR  167 (293)
T PF02719_consen  146 EKLVQAANQYSGNSDTKFSSVR  167 (293)
T ss_dssp             HHHHHHHCCTSSSS--EEEEEE
T ss_pred             HHHHHHHhhhCCCCCcEEEEEE
Confidence            99999998875   45666655

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.88  E-value=2.9e-21  Score=158.94  Aligned_cols=163  Identities=20%  Similarity=0.196  Sum_probs=120.1

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      ++++||||+|+||.+++++|+++|++|++++|+..+.+   .....+...+.++.++.+|++|.+++.+++++     +.
T Consensus         6 ~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~---~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (246)
T PRK05653          6 KTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAE---ALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFGA   82 (246)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHH---HHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            79999999999999999999999999999987543322   22222222345688899999999999888765     57


Q ss_pred             CCEEEEcccccccCCCCCCc----hhhHhhhHHHHHHH----HHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYVGESTLDP----LKYYHNITSNTLVV----LESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (248)
Q Consensus       146 iD~li~~Ag~~~~~~~~~~~----~~~~~~~~~~~~~l----l~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (248)
                      +|+|||+||........+.+    .+.+..|..+..++    ++.+.+.+.++||++||.....           +..+.
T Consensus        83 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~~-----------~~~~~  151 (246)
T PRK05653         83 LDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGVT-----------GNPGQ  151 (246)
T ss_pred             CCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhcc-----------CCCCC
Confidence            89999999976543322222    23344555555544    4444566668999999965531           23446


Q ss_pred             ChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          218 NPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      ..|+.+|.+.+.+++.++++   .++++++++|
T Consensus       152 ~~y~~sk~~~~~~~~~l~~~~~~~~i~~~~i~p  184 (246)
T PRK05653        152 TNYSAAKAGVIGFTKALALELASRGITVNAVAP  184 (246)
T ss_pred             cHhHhHHHHHHHHHHHHHHHHhhcCeEEEEEEe
Confidence            78999999999999999876   4899999998

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.88  E-value=3.8e-21  Score=158.55  Aligned_cols=164  Identities=19%  Similarity=0.185  Sum_probs=119.3

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEE-ecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIV-DNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----  143 (248)
                      +++++||||+|+||.++++.|+++|++|+++ +|+....   .+..+.+...+.++.++.+|++|.+++.++++.     
T Consensus         5 ~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~---~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (247)
T PRK05565          5 GKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAA---QELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKF   81 (247)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHH---HHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            4899999999999999999999999999988 7643322   222222222244688899999999999888764     


Q ss_pred             CCCCEEEEcccccccCCCCCCch----hhHhhhHHHHHH----HHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCC
Q 025786          144 NAFDAVMHFAAVAYVGESTLDPL----KYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (248)
Q Consensus       144 ~~iD~li~~Ag~~~~~~~~~~~~----~~~~~~~~~~~~----ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~  215 (248)
                      +++|+||||||........+.+.    ..+..|..+...    +++.+.+.+.+++|++||...+..           .+
T Consensus        82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~-----------~~  150 (247)
T PRK05565         82 GKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLIG-----------AS  150 (247)
T ss_pred             CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhccC-----------CC
Confidence            47999999999764333222222    334455555433    455555666778999999766521           22


Q ss_pred             CCChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          216 PINPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      ...+|+.+|.+.+.+++.++.+   .|+++++++|
T Consensus       151 ~~~~y~~sK~a~~~~~~~~~~~~~~~gi~~~~v~p  185 (247)
T PRK05565        151 CEVLYSASKGAVNAFTKALAKELAPSGIRVNAVAP  185 (247)
T ss_pred             CccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEE
Confidence            3568999999999999998876   4899999998

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=99.88  E-value=3e-21  Score=159.26  Aligned_cols=167  Identities=18%  Similarity=0.224  Sum_probs=116.2

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~  144 (248)
                      |++++||||+|+||++++++|+++|++|+++.+  ++.+...+...++...+.++.++++|++|.+++++++++     +
T Consensus         1 ~~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~   78 (247)
T PRK09730          1 MAIALVTGGSRGIGRATALLLAQEGYTVAVNYQ--QNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDE   78 (247)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeC--CChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCC
Confidence            578999999999999999999999999987532  122222233333322244678899999999999988875     5


Q ss_pred             CCCEEEEcccccccC-CCCCCc----hhhHhhhHHHHHH----HHHHHHHc---CCCEEEEeccceecCCCCCCCCCCCC
Q 025786          145 AFDAVMHFAAVAYVG-ESTLDP----LKYYHNITSNTLV----VLESMARH---GVDTLIYSSTCATYGEPEKMPITEET  212 (248)
Q Consensus       145 ~iD~li~~Ag~~~~~-~~~~~~----~~~~~~~~~~~~~----ll~~~~~~---~~~~iV~~SS~~~~g~~~~~~~~e~~  212 (248)
                      ++|+||||||..... ...+.+    +..++.|+.++..    +++.+.+.   ..++||++||...+...         
T Consensus        79 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~---------  149 (247)
T PRK09730         79 PLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGA---------  149 (247)
T ss_pred             CCCEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCC---------
Confidence            799999999975322 222222    2344555555443    44445443   24689999997654211         


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          213 PQAPINPYGKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       213 ~~~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                       ......|+.+|++.+.+++.++.+   .++++++++|.
T Consensus       150 -~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~i~pg  187 (247)
T PRK09730        150 -PGEYVDYAASKGAIDTLTTGLSLEVAAQGIRVNCVRPG  187 (247)
T ss_pred             -CCcccchHhHHHHHHHHHHHHHHHHHHhCeEEEEEEeC
Confidence             111346999999999999999876   48999999984

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=99.88  E-value=4e-22  Score=161.51  Aligned_cols=173  Identities=28%  Similarity=0.468  Sum_probs=146.3

Q ss_pred             eEEEEecCCchhHHHHHHHHHHC--CCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKD--SYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~  148 (248)
                      ++++||||+||||++.+..+...  .++.+.++...--..  .+.+++. .+.++..++..|+.+...+..++....+|.
T Consensus         7 ~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~--~~~l~~~-~n~p~ykfv~~di~~~~~~~~~~~~~~id~   83 (331)
T KOG0747|consen    7 KNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSN--LKNLEPV-RNSPNYKFVEGDIADADLVLYLFETEEIDT   83 (331)
T ss_pred             ceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccc--cchhhhh-ccCCCceEeeccccchHHHHhhhccCchhh
Confidence            78999999999999999999876  466666664322111  2223333 234588999999999999999998889999


Q ss_pred             EEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHc-CCCEEEEeccceecCCCCCCCCC-CCCCCCCCChHHHHHHH
Q 025786          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARH-GVDTLIYSSTCATYGEPEKMPIT-EETPQAPINPYGKAKKM  226 (248)
Q Consensus       149 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~-~~~~iV~~SS~~~~g~~~~~~~~-e~~~~~~~~~Y~~sK~a  226 (248)
                      |||.|+......+..++.++..+|+.++..+++.++.. +.+++|++||..+||+....... |.+.+.|.++|++||+|
T Consensus        84 vihfaa~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~sg~i~~fvhvSTdeVYGds~~~~~~~E~s~~nPtnpyAasKaA  163 (331)
T KOG0747|consen   84 VIHFAAQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVSGNIRRFVHVSTDEVYGDSDEDAVVGEASLLNPTNPYAASKAA  163 (331)
T ss_pred             hhhhHhhhhhhhhcCchHHHhcCCchhhhhHHHHHHhccCeeEEEEecccceecCccccccccccccCCCCCchHHHHHH
Confidence            99999988776777788888999999999999999887 46899999999999999887776 88999999999999999


Q ss_pred             HHHHHHHHhhcCCCcEEEEe
Q 025786          227 AEDIILDFSKNSDMAVLQCH  246 (248)
Q Consensus       227 ~e~l~~~~~~~~gi~~~~v~  246 (248)
                      +|++++++..++|++++++|
T Consensus       164 aE~~v~Sy~~sy~lpvv~~R  183 (331)
T KOG0747|consen  164 AEMLVRSYGRSYGLPVVTTR  183 (331)
T ss_pred             HHHHHHHHhhccCCcEEEEe
Confidence            99999999999999999987

>PRK07577 short chain dehydrogenase; Provisional

Probab=99.88  E-value=2.8e-21  Score=158.32  Aligned_cols=151  Identities=19%  Similarity=0.179  Sum_probs=115.2

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc----CCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----NAF  146 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~----~~i  146 (248)
                      |+++||||+|+||++++++|+++|++|++++|.....         .     ...++.+|++|.+++++++++    .++
T Consensus         4 k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~---------~-----~~~~~~~D~~~~~~~~~~~~~~~~~~~~   69 (234)
T PRK07577          4 RTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDD---------F-----PGELFACDLADIEQTAATLAQINEIHPV   69 (234)
T ss_pred             CEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCcccc---------c-----CceEEEeeCCCHHHHHHHHHHHHHhCCC
Confidence            7899999999999999999999999999998754220         0     124688999999998877764    468


Q ss_pred             CEEEEcccccccCCCCCC----chhhHhhhHHH----HHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCCC
Q 025786          147 DAVMHFAAVAYVGESTLD----PLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPIN  218 (248)
Q Consensus       147 D~li~~Ag~~~~~~~~~~----~~~~~~~~~~~----~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~  218 (248)
                      |+||||||........+.    ....++.|+.+    +..+++.|++.+.++||++||...++.            +...
T Consensus        70 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~------------~~~~  137 (234)
T PRK07577         70 DAIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRAIFGA------------LDRT  137 (234)
T ss_pred             cEEEECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccccccCC------------CCch
Confidence            999999998654332221    22234445444    344667777777789999999876532            2356


Q ss_pred             hHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          219 PYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       219 ~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      +|+.||++.+.+++.++.+   .|+++++++|
T Consensus       138 ~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~p  169 (234)
T PRK07577        138 SYSAAKSALVGCTRTWALELAEYGITVNAVAP  169 (234)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhCcEEEEEec
Confidence            8999999999999999876   4899999998

>PRK07060 short chain dehydrogenase; Provisional

Probab=99.88  E-value=4.2e-21  Score=158.26  Aligned_cols=158  Identities=19%  Similarity=0.182  Sum_probs=116.6

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-CCCCEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-NAFDAV  149 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-~~iD~l  149 (248)
                      ++++||||+|+||+++++.|+++|++|++++|+..+   ..+..+.     ....++.+|+++.+++.++++. +++|+|
T Consensus        10 ~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~---~~~~~~~-----~~~~~~~~D~~~~~~v~~~~~~~~~~d~v   81 (245)
T PRK07060         10 KSVLVTGASSGIGRACAVALAQRGARVVAAARNAAA---LDRLAGE-----TGCEPLRLDVGDDAAIRAALAAAGAFDGL   81 (245)
T ss_pred             CEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHH---HHHHHHH-----hCCeEEEecCCCHHHHHHHHHHhCCCCEE
Confidence            899999999999999999999999999999864322   2221111     1356788999999999988876 579999


Q ss_pred             EEcccccccCCCCCC----chhhHhhhHHHHHHHHHHHH----HcC-CCEEEEeccceecCCCCCCCCCCCCCCCCCChH
Q 025786          150 MHFAAVAYVGESTLD----PLKYYHNITSNTLVVLESMA----RHG-VDTLIYSSTCATYGEPEKMPITEETPQAPINPY  220 (248)
Q Consensus       150 i~~Ag~~~~~~~~~~----~~~~~~~~~~~~~~ll~~~~----~~~-~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y  220 (248)
                      |||||........+.    .++.+..|..++..+++.+.    +.+ .++||++||...+.           +.++...|
T Consensus        82 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~-----------~~~~~~~y  150 (245)
T PRK07060         82 VNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALV-----------GLPDHLAY  150 (245)
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcC-----------CCCCCcHh
Confidence            999997644332222    22334456666555555443    333 37999999977653           23346789


Q ss_pred             HHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          221 GKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       221 ~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      +.||.+++.+++.++.+   .++++++++|
T Consensus       151 ~~sK~a~~~~~~~~a~~~~~~~i~v~~v~p  180 (245)
T PRK07060        151 CASKAALDAITRVLCVELGPHGIRVNSVNP  180 (245)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhCeEEEEEee
Confidence            99999999999999876   4799999998

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=99.88  E-value=1.6e-21  Score=151.27  Aligned_cols=159  Identities=19%  Similarity=0.211  Sum_probs=118.2

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      .+||||||++|||++++++|.+.|-+|++++|+.   +.+.+...    ..+.+....||+.|.++.+++++.     ..
T Consensus         6 nTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e---~~L~e~~~----~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~   78 (245)
T COG3967           6 NTILITGGASGIGLALAKRFLELGNTVIICGRNE---ERLAEAKA----ENPEIHTEVCDVADRDSRRELVEWLKKEYPN   78 (245)
T ss_pred             cEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcH---HHHHHHHh----cCcchheeeecccchhhHHHHHHHHHhhCCc
Confidence            7999999999999999999999999999998643   23333222    234677789999999988777765     57


Q ss_pred             CCEEEEcccccccCCCC------CCchhhHhhhHHH----HHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYVGEST------LDPLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (248)
Q Consensus       146 iD~li~~Ag~~~~~~~~------~~~~~~~~~~~~~----~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~  215 (248)
                      +++||||||+...-+..      ++.++....|+..    +..++|.+.++....||++||.-++           .|..
T Consensus        79 lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLaf-----------vPm~  147 (245)
T COG3967          79 LNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLAF-----------VPMA  147 (245)
T ss_pred             hheeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEecccccc-----------Cccc
Confidence            99999999987543221      1223334445444    4558888888877799999997766           2444


Q ss_pred             CCChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          216 PINPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      ....|+++|++...++.+++.+   .+++|+=+-|
T Consensus       148 ~~PvYcaTKAaiHsyt~aLR~Qlk~t~veVIE~~P  182 (245)
T COG3967         148 STPVYCATKAAIHSYTLALREQLKDTSVEVIELAP  182 (245)
T ss_pred             ccccchhhHHHHHHHHHHHHHHhhhcceEEEEecC
Confidence            4567999999999999999877   4677765544

>PRK06940 short chain dehydrogenase; Provisional

Probab=99.88  E-value=2.6e-21  Score=162.77  Aligned_cols=169  Identities=17%  Similarity=0.147  Sum_probs=117.8

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc----CCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----NAF  146 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~----~~i  146 (248)
                      |+++|||+ ||||++++++|+ +|++|++++|+..+   +.+..+++...+.++.++++|++|.+++.+++++    +++
T Consensus         3 k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~---~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~i   77 (275)
T PRK06940          3 EVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEEN---LEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPV   77 (275)
T ss_pred             CEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHH---HHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCC
Confidence            78999998 699999999996 89999999975432   2222233322234688899999999999888865    679


Q ss_pred             CEEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHc--CCCEEEEeccceecCCCC-----C---CCCCCC----C
Q 025786          147 DAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARH--GVDTLIYSSTCATYGEPE-----K---MPITEE----T  212 (248)
Q Consensus       147 D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~--~~~~iV~~SS~~~~g~~~-----~---~~~~e~----~  212 (248)
                      |+||||||+..   .....+..++.|..++..+++.+.+.  ..+++|++||.+......     .   ..++..    .
T Consensus        78 d~li~nAG~~~---~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (275)
T PRK06940         78 TGLVHTAGVSP---SQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQSGHRLPALTAEQERALATTPTEELLSL  154 (275)
T ss_pred             CEEEECCCcCC---chhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEecccccCcccchhhhcccccccccccccc
Confidence            99999999752   22346677788888866655544321  125678888765542110     0   000000    0


Q ss_pred             C-------CCCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          213 P-------QAPINPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       213 ~-------~~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      +       ..+...|+.||++.+.+++.++.+   +||++++|+|
T Consensus       155 ~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~P  199 (275)
T PRK06940        155 PFLQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISP  199 (275)
T ss_pred             ccccccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEecc
Confidence            0       124678999999999999999887   5799999998

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=99.88  E-value=2.9e-21  Score=163.95  Aligned_cols=164  Identities=12%  Similarity=-0.031  Sum_probs=109.4

Q ss_pred             ceEEEEecC--CchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhh-----h--cCCC---CceEEEEccC--CC--
Q 025786           70 VTHVLVTGG--AGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQE-----L--FPEP---GRLQFIYADL--GD--  133 (248)
Q Consensus        70 ~k~vlITGa--sg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~-----~--~~~~---~~~~~~~~Dl--~~--  133 (248)
                      +|++|||||  |+|||+++|+.|+++|++|++ +|.....+.....++.     .  ...+   .....+.+|+  ++  
T Consensus         9 gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~   87 (303)
T PLN02730          9 GKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVFDTPE   87 (303)
T ss_pred             CCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceecCccc
Confidence            399999999  899999999999999999998 5433322222211111     0  0001   1245688898  33  


Q ss_pred             ----------------HHHHHHHhhc-----CCCCEEEEcccccc--cCCCCCCchhhHh----hhHHH----HHHHHHH
Q 025786          134 ----------------AKAVNKFFSE-----NAFDAVMHFAAVAY--VGESTLDPLKYYH----NITSN----TLVVLES  182 (248)
Q Consensus       134 ----------------~~~~~~~~~~-----~~iD~li~~Ag~~~--~~~~~~~~~~~~~----~~~~~----~~~ll~~  182 (248)
                                      ++++++++++     +++|+||||||...  ..+..+.+.+.|+    .|+.+    ++.+++.
T Consensus        88 ~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~~~~p~  167 (303)
T PLN02730         88 DVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQHFGPI  167 (303)
T ss_pred             cCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence                            3367766664     68999999998532  1233333333443    44444    4457777


Q ss_pred             HHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCC-ChHHHHHHHHHHHHHHHhhc----CCCcEEEEec
Q 025786          183 MARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI-NPYGKAKKMAEDIILDFSKN----SDMAVLQCHR  247 (248)
Q Consensus       183 ~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~-~~Y~~sK~a~e~l~~~~~~~----~gi~~~~v~P  247 (248)
                      |++.  ++||++||....-           +.+.. ..|+.||++.+.|++.++.|    +||+++.|.|
T Consensus       168 m~~~--G~II~isS~a~~~-----------~~p~~~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~P  224 (303)
T PLN02730        168 MNPG--GASISLTYIASER-----------IIPGYGGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISA  224 (303)
T ss_pred             HhcC--CEEEEEechhhcC-----------CCCCCchhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEee
Confidence            7653  7999999976541           22223 47999999999999999986    3699999998

>PRK12828 short chain dehydrogenase; Provisional

Probab=99.88  E-value=4.9e-21  Score=157.02  Aligned_cols=162  Identities=19%  Similarity=0.195  Sum_probs=118.9

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      |++|||||+|+||++++++|+++|++|++++|+..+..+   ..+++..  ..+.++.+|++|.+++.+++++     ++
T Consensus         8 k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~---~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (239)
T PRK12828          8 KVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQ---TLPGVPA--DALRIGGIDLVDPQAARRAVDEVNRQFGR   82 (239)
T ss_pred             CEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHH---HHHHHhh--cCceEEEeecCCHHHHHHHHHHHHHHhCC
Confidence            899999999999999999999999999999975433222   2222211  2466788999999999888875     57


Q ss_pred             CCEEEEcccccccCCCCCCch----hhHhhhHHHHHHH----HHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYVGESTLDPL----KYYHNITSNTLVV----LESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (248)
Q Consensus       146 iD~li~~Ag~~~~~~~~~~~~----~~~~~~~~~~~~l----l~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (248)
                      +|+|||+||..........+.    +.+..|..++..+    ++.+.+.+.++||++||...++.           .++.
T Consensus        83 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~-----------~~~~  151 (239)
T PRK12828         83 LDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALKA-----------GPGM  151 (239)
T ss_pred             cCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhccC-----------CCCc
Confidence            999999999754332222222    2344555555554    44445566789999999877632           2346


Q ss_pred             ChHHHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          218 NPYGKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                      ..|+.+|.+.+.+++.++.+   .++++++++|.
T Consensus       152 ~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~i~pg  185 (239)
T PRK12828        152 GAYAAAKAGVARLTEALAAELLDRGITVNAVLPS  185 (239)
T ss_pred             chhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecC
Confidence            78999999999999988875   58999999984

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.88  E-value=8.5e-21  Score=156.34  Aligned_cols=164  Identities=17%  Similarity=0.157  Sum_probs=117.4

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      ++++||||+|+||+++++.|+++|++|+++.|+...  ...+...++.....++.++.+|+++.+++.+++++     ++
T Consensus         6 ~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   83 (248)
T PRK05557          6 KVALVTGASRGIGRAIAERLAAQGANVVINYASSEA--GAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEFGG   83 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchh--HHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            899999999999999999999999999888764321  11222222222245788899999999999888765     47


Q ss_pred             CCEEEEcccccccCCCCCCc----hhhHhhhHHHHHHHHHHH----HHcCCCEEEEeccceecCCCCCCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYVGESTLDP----LKYYHNITSNTLVVLESM----ARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (248)
Q Consensus       146 iD~li~~Ag~~~~~~~~~~~----~~~~~~~~~~~~~ll~~~----~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (248)
                      +|+||||||........+..    +..+..|..++..+++.+    .+.+.++||++||.....           +.+..
T Consensus        84 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~-----------~~~~~  152 (248)
T PRK05557         84 VDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLM-----------GNPGQ  152 (248)
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccCc-----------CCCCC
Confidence            99999999976543322222    233445555555554444    445567899999964431           12336


Q ss_pred             ChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          218 NPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      ..|+.+|.+.+.+++.++.+   .++++++++|
T Consensus       153 ~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~v~p  185 (248)
T PRK05557        153 ANYAASKAGVIGFTKSLARELASRGITVNAVAP  185 (248)
T ss_pred             chhHHHHHHHHHHHHHHHHHhhhhCeEEEEEec
Confidence            78999999999999998875   4799999988

>PRK07074 short chain dehydrogenase; Provisional

Probab=99.88  E-value=3.4e-21  Score=160.13  Aligned_cols=161  Identities=19%  Similarity=0.132  Sum_probs=117.2

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      ++++||||+|+||+++++.|+++|++|++++|+..+.   .+..+++.  ..++.++++|++|.+++.+++++     ++
T Consensus         3 k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~---~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   77 (257)
T PRK07074          3 RTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAAL---AAFADALG--DARFVPVACDLTDAASLAAALANAAAERGP   77 (257)
T ss_pred             CEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHH---HHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            7899999999999999999999999999998754322   22222231  24688899999999999887765     46


Q ss_pred             CCEEEEcccccccCCCCCCchhhH----hhhHHHHHH----HHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYVGESTLDPLKYY----HNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (248)
Q Consensus       146 iD~li~~Ag~~~~~~~~~~~~~~~----~~~~~~~~~----ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (248)
                      +|+||||||........+.+.+.+    ..|..+...    +++.+.+.+.++||++||...+..            ...
T Consensus        78 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~------------~~~  145 (257)
T PRK07074         78 VDVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGMAA------------LGH  145 (257)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcCC------------CCC
Confidence            999999999765433332223333    344444444    445555566679999999654321            123


Q ss_pred             ChHHHHHHHHHHHHHHHhhcC---CCcEEEEecC
Q 025786          218 NPYGKAKKMAEDIILDFSKNS---DMAVLQCHRF  248 (248)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~~~~~---gi~~~~v~Pf  248 (248)
                      ..|+.||++.+.+++.++.++   |+++++++|.
T Consensus       146 ~~y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg  179 (257)
T PRK07074        146 PAYSAAKAGLIHYTKLLAVEYGRFGIRANAVAPG  179 (257)
T ss_pred             cccHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeC
Confidence            479999999999999999774   7999999983

>PRK08703 short chain dehydrogenase; Provisional

Probab=99.88  E-value=5.4e-21  Score=157.34  Aligned_cols=165  Identities=16%  Similarity=0.154  Sum_probs=115.1

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCC--HHHHHHHhhc-----
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD--AKAVNKFFSE-----  143 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~-----  143 (248)
                      ++++||||+||||++++++|+++|++|++++|+....+...+.+.+.  ....+.++.+|+++  .+++.+++++     
T Consensus         7 k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~~   84 (239)
T PRK08703          7 KTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEA--GHPEPFAIRFDLMSAEEKEFEQFAATIAEAT   84 (239)
T ss_pred             CEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHc--CCCCcceEEeeecccchHHHHHHHHHHHHHh
Confidence            89999999999999999999999999999997653332222222211  12356778899975  4455554432     


Q ss_pred             -CCCCEEEEccccccc-CCCCCCch----hhHhhhHHHHHH----HHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCC
Q 025786          144 -NAFDAVMHFAAVAYV-GESTLDPL----KYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETP  213 (248)
Q Consensus       144 -~~iD~li~~Ag~~~~-~~~~~~~~----~~~~~~~~~~~~----ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~  213 (248)
                       +++|+||||||.... .+..+.+.    ..++.|..+...    +++.+.+.+.+++|++||....           .+
T Consensus        85 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~-----------~~  153 (239)
T PRK08703         85 QGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGE-----------TP  153 (239)
T ss_pred             CCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEeccccc-----------cC
Confidence             478999999997532 22222222    244556655443    5555665666799999985543           23


Q ss_pred             CCCCChHHHHHHHHHHHHHHHhhcC----CCcEEEEecC
Q 025786          214 QAPINPYGKAKKMAEDIILDFSKNS----DMAVLQCHRF  248 (248)
Q Consensus       214 ~~~~~~Y~~sK~a~e~l~~~~~~~~----gi~~~~v~Pf  248 (248)
                      .+....|+.||++.+.+++.++.++    ++++++++|.
T Consensus       154 ~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG  192 (239)
T PRK08703        154 KAYWGGFGASKAALNYLCKVAADEWERFGNLRANVLVPG  192 (239)
T ss_pred             CCCccchHHhHHHHHHHHHHHHHHhccCCCeEEEEEecC
Confidence            3456789999999999999999884    5999999984

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=99.88  E-value=1.6e-21  Score=150.07  Aligned_cols=162  Identities=17%  Similarity=0.105  Sum_probs=121.4

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      |.++||||++|||++++..|+++|++|.+.++...   .+++....+.. .+....+.||+++.++++..+++     +.
T Consensus        15 k~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~---~A~ata~~L~g-~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~   90 (256)
T KOG1200|consen   15 KVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSA---AAEATAGDLGG-YGDHSAFSCDVSKAHDVQNTLEEMEKSLGT   90 (256)
T ss_pred             ceeEEecCCchHHHHHHHHHHhcCcEEEEeecchh---hHHHHHhhcCC-CCccceeeeccCcHHHHHHHHHHHHHhcCC
Confidence            89999999999999999999999999999986433   33344444432 34667789999999999887766     78


Q ss_pred             CCEEEEcccccccCCCCCCchhhHh----hhHHHH----HHHHHHHHH--cCCCEEEEeccceecCCCCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYVGESTLDPLKYYH----NITSNT----LVVLESMAR--HGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (248)
Q Consensus       146 iD~li~~Ag~~~~~~~~~~~~~~~~----~~~~~~----~~ll~~~~~--~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~  215 (248)
                      +++|+||||+..........++.|+    .|..++    +.+...|..  +++.+||++||+...           ....
T Consensus        91 psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGk-----------iGN~  159 (256)
T KOG1200|consen   91 PSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGK-----------IGNF  159 (256)
T ss_pred             CcEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhcc-----------cccc
Confidence            9999999999866554444444444    444443    334555333  234499999996553           2233


Q ss_pred             CCChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          216 PINPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      .++.|++||.....|++..++|   .+|+++.|.|
T Consensus       160 GQtnYAAsK~GvIgftktaArEla~knIrvN~VlP  194 (256)
T KOG1200|consen  160 GQTNYAASKGGVIGFTKTAARELARKNIRVNVVLP  194 (256)
T ss_pred             cchhhhhhcCceeeeeHHHHHHHhhcCceEeEecc
Confidence            4778999999999999999988   5899999988

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=99.88  E-value=3.5e-21  Score=159.06  Aligned_cols=139  Identities=23%  Similarity=0.314  Sum_probs=126.4

Q ss_pred             EEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEEE
Q 025786           72 HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVMH  151 (248)
Q Consensus        72 ~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li~  151 (248)
                      ++||||++|.+|.+|++.|. .+++|+.+++.                        .+|++|.+.+.+++++.++|+|||
T Consensus         2 ~iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~------------------------~~Ditd~~~v~~~i~~~~PDvVIn   56 (281)
T COG1091           2 KILITGANGQLGTELRRALP-GEFEVIATDRA------------------------ELDITDPDAVLEVIRETRPDVVIN   56 (281)
T ss_pred             cEEEEcCCChHHHHHHHHhC-CCceEEeccCc------------------------cccccChHHHHHHHHhhCCCEEEE
Confidence            39999999999999999998 77899987631                        189999999999999989999999


Q ss_pred             cccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCCChHHHHHHHHHHHH
Q 025786          152 FAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDII  231 (248)
Q Consensus       152 ~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e~l~  231 (248)
                      +|+.......+..++..|..|..+..++.+++.+.+. .+||+||-.+|.+..+.++.|+++..|.+.||.||.+.|..+
T Consensus        57 ~AAyt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~ga-~lVhiSTDyVFDG~~~~~Y~E~D~~~P~nvYG~sKl~GE~~v  135 (281)
T COG1091          57 AAAYTAVDKAESEPELAFAVNATGAENLARAAAEVGA-RLVHISTDYVFDGEKGGPYKETDTPNPLNVYGRSKLAGEEAV  135 (281)
T ss_pred             CccccccccccCCHHHHHHhHHHHHHHHHHHHHHhCC-eEEEeecceEecCCCCCCCCCCCCCCChhhhhHHHHHHHHHH
Confidence            9999888778888899999999999999999999874 899999999998888889999999999999999999999999


Q ss_pred             HHHhh
Q 025786          232 LDFSK  236 (248)
Q Consensus       232 ~~~~~  236 (248)
                      ++...
T Consensus       136 ~~~~~  140 (281)
T COG1091         136 RAAGP  140 (281)
T ss_pred             HHhCC
Confidence            88653

>PRK07041 short chain dehydrogenase; Provisional

Probab=99.87  E-value=2.2e-21  Score=158.68  Aligned_cols=160  Identities=21%  Similarity=0.153  Sum_probs=120.6

Q ss_pred             EEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-CCCCEEEEc
Q 025786           74 LVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-NAFDAVMHF  152 (248)
Q Consensus        74 lITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-~~iD~li~~  152 (248)
                      +||||+|+||++++++|+++|++|++++|+..   ...+..+++. ...++.++.+|++|.+++.+++++ +++|+||||
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~---~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~id~li~~   76 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASRSRD---RLAAAARALG-GGAPVRTAALDITDEAAVDAFFAEAGPFDHVVIT   76 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeCCHH---HHHHHHHHHh-cCCceEEEEccCCCHHHHHHHHHhcCCCCEEEEC
Confidence            69999999999999999999999999987532   2222222221 134688899999999999999986 679999999


Q ss_pred             ccccccCCCCC----CchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCCChHHHHHHHHH
Q 025786          153 AAVAYVGESTL----DPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAE  228 (248)
Q Consensus       153 Ag~~~~~~~~~----~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e  228 (248)
                      ||........+    ..+..++.|..+...+.......+.++||++||.+.+.           +.++...|+.||++.+
T Consensus        77 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~g~iv~~ss~~~~~-----------~~~~~~~Y~~sK~a~~  145 (230)
T PRK07041         77 AADTPGGPVRALPLAAAQAAMDSKFWGAYRVARAARIAPGGSLTFVSGFAAVR-----------PSASGVLQGAINAALE  145 (230)
T ss_pred             CCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhhcCCeEEEEECchhhcC-----------CCCcchHHHHHHHHHH
Confidence            99754433222    23344556666666676655444567999999987763           3345778999999999


Q ss_pred             HHHHHHhhcC-CCcEEEEecC
Q 025786          229 DIILDFSKNS-DMAVLQCHRF  248 (248)
Q Consensus       229 ~l~~~~~~~~-gi~~~~v~Pf  248 (248)
                      .++++++.++ ++++++++|.
T Consensus       146 ~~~~~la~e~~~irv~~i~pg  166 (230)
T PRK07041        146 ALARGLALELAPVRVNTVSPG  166 (230)
T ss_pred             HHHHHHHHHhhCceEEEEeec
Confidence            9999999884 5888998883

>PRK06057 short chain dehydrogenase; Provisional

Probab=99.87  E-value=9.8e-21  Score=157.34  Aligned_cols=159  Identities=18%  Similarity=0.192  Sum_probs=115.1

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      ++|+||||+||||.+++++|+++|++|++++|+...   ..+..+++     ...++++|++|.+++++++++     ++
T Consensus         8 ~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~---~~~~~~~~-----~~~~~~~D~~~~~~~~~~~~~~~~~~~~   79 (255)
T PRK06057          8 RVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEA---GKAAADEV-----GGLFVPTDVTDEDAVNALFDTAAETYGS   79 (255)
T ss_pred             CEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHH---HHHHHHHc-----CCcEEEeeCCCHHHHHHHHHHHHHHcCC
Confidence            899999999999999999999999999999864322   22222222     125789999999999888875     57


Q ss_pred             CCEEEEcccccccC--CCCCCc----hhhHhhhHHHH----HHHHHHHHHcCCCEEEEeccce-ecCCCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYVG--ESTLDP----LKYYHNITSNT----LVVLESMARHGVDTLIYSSTCA-TYGEPEKMPITEETPQ  214 (248)
Q Consensus       146 iD~li~~Ag~~~~~--~~~~~~----~~~~~~~~~~~----~~ll~~~~~~~~~~iV~~SS~~-~~g~~~~~~~~e~~~~  214 (248)
                      +|+||||||.....  ...+..    +..++.|..++    ..+++.+++.+.++||++||.. .++.           .
T Consensus        80 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~~~g~-----------~  148 (255)
T PRK06057         80 VDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAVMGS-----------A  148 (255)
T ss_pred             CCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchhhccCC-----------C
Confidence            99999999975321  111222    23344555443    3466777666667999998864 3432           1


Q ss_pred             CCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          215 APINPYGKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       215 ~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                      .+...|+.||++.+.+++.++.+   .|+++++++|.
T Consensus       149 ~~~~~Y~~sKaal~~~~~~l~~~~~~~gi~v~~i~pg  185 (255)
T PRK06057        149 TSQISYTASKGGVLAMSRELGVQFARQGIRVNALCPG  185 (255)
T ss_pred             CCCcchHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeC
Confidence            23567999999999999988766   47999999994

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=99.87  E-value=3e-21  Score=160.59  Aligned_cols=164  Identities=14%  Similarity=0.086  Sum_probs=116.9

Q ss_pred             EEEEecCCchhHHHHHHHHHH----CCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc----
Q 025786           72 HVLVTGGAGYIGSHAALRLLK----DSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----  143 (248)
Q Consensus        72 ~vlITGasg~IG~~la~~L~~----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~----  143 (248)
                      +++||||++|||++++++|++    +|++|++++|+....++..+.++.. ..+.++.++.+|++|.+++++++++    
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~-~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~   80 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAE-RSGLRVVRVSLDLGAEAGLEQLLKALREL   80 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhc-CCCceEEEEEeccCCHHHHHHHHHHHHhc
Confidence            689999999999999999997    7999999987543333222222221 1134688899999999999887764    


Q ss_pred             -CC----CCEEEEcccccccC-C-CC-----CCchhhHhhhHHHH----HHHHHHHHHcC--CCEEEEeccceecCCCCC
Q 025786          144 -NA----FDAVMHFAAVAYVG-E-ST-----LDPLKYYHNITSNT----LVVLESMARHG--VDTLIYSSTCATYGEPEK  205 (248)
Q Consensus       144 -~~----iD~li~~Ag~~~~~-~-~~-----~~~~~~~~~~~~~~----~~ll~~~~~~~--~~~iV~~SS~~~~g~~~~  205 (248)
                       +.    .|+||||||..... . ..     +..+..++.|+.+.    ..+++.|.+.+  .++||++||.+.+.    
T Consensus        81 ~g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~----  156 (256)
T TIGR01500        81 PRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQ----  156 (256)
T ss_pred             cccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCC----
Confidence             11    36999999974321 1 11     12233455666553    44666676542  36899999976642    


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          206 MPITEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       206 ~~~~e~~~~~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                             +.+....|+.||++.+.+++.++.+   .|+++++++|
T Consensus       157 -------~~~~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~P  194 (256)
T TIGR01500       157 -------PFKGWALYCAGKAARDMLFQVLALEEKNPNVRVLNYAP  194 (256)
T ss_pred             -------CCCCchHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecC
Confidence                   3345678999999999999999987   5799999998

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>PRK06484 short chain dehydrogenase; Validated

Probab=99.87  E-value=7.4e-21  Score=173.44  Aligned_cols=160  Identities=18%  Similarity=0.171  Sum_probs=119.5

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      |+++||||++|||++++++|+++|++|++++|+..   .+.+..+++   +.++.++++|++|++++++++++     ++
T Consensus         6 k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~---~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   79 (520)
T PRK06484          6 RVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVE---RARERADSL---GPDHHALAMDVSDEAQIREGFEQLHREFGR   79 (520)
T ss_pred             eEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHH---HHHHHHHHh---CCceeEEEeccCCHHHHHHHHHHHHHHhCC
Confidence            89999999999999999999999999999986432   233333333   34677899999999999888876     68


Q ss_pred             CCEEEEccccccc--CCCCCCc----hhhHhhhHHHH----HHHHHHHHHcCCC-EEEEeccceecCCCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYV--GESTLDP----LKYYHNITSNT----LVVLESMARHGVD-TLIYSSTCATYGEPEKMPITEETPQ  214 (248)
Q Consensus       146 iD~li~~Ag~~~~--~~~~~~~----~~~~~~~~~~~----~~ll~~~~~~~~~-~iV~~SS~~~~g~~~~~~~~e~~~~  214 (248)
                      +|+||||||+...  ....+.+    +..++.|+.++    +.+++.|++.+.+ +||++||.....           +.
T Consensus        80 iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~-----------~~  148 (520)
T PRK06484         80 IDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLV-----------AL  148 (520)
T ss_pred             CCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCC-----------CC
Confidence            9999999997421  1222222    23344555543    3466677665544 999999976652           23


Q ss_pred             CCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          215 APINPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       215 ~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      +....|+.||++.+.+++.++.+   .+++++.++|
T Consensus       149 ~~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~i~P  184 (520)
T PRK06484        149 PKRTAYSASKAAVISLTRSLACEWAAKGIRVNAVLP  184 (520)
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHhhhhCeEEEEEcc
Confidence            34678999999999999999988   4799999988

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.87  E-value=7.4e-21  Score=156.00  Aligned_cols=153  Identities=18%  Similarity=0.204  Sum_probs=113.2

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-CCCCEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-NAFDAV  149 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-~~iD~l  149 (248)
                      |+++||||+|+||+++++.|+++|++|++++|.....            ...++.++.+|++++  ++++++. +++|+|
T Consensus         6 k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~------------~~~~~~~~~~D~~~~--~~~~~~~~~~id~l   71 (235)
T PRK06550          6 KTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPD------------LSGNFHFLQLDLSDD--LEPLFDWVPSVDIL   71 (235)
T ss_pred             CEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccc------------cCCcEEEEECChHHH--HHHHHHhhCCCCEE
Confidence            8999999999999999999999999999998643211            023578899999987  5555544 579999


Q ss_pred             EEccccccc-CCCCC----CchhhHhhhHHHHHH----HHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCCChH
Q 025786          150 MHFAAVAYV-GESTL----DPLKYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPY  220 (248)
Q Consensus       150 i~~Ag~~~~-~~~~~----~~~~~~~~~~~~~~~----ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y  220 (248)
                      |||||.... ....+    +.+..++.|..++..    +++.+.+.+.++||++||...+.           +.+....|
T Consensus        72 v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~-----------~~~~~~~Y  140 (235)
T PRK06550         72 CNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFV-----------AGGGGAAY  140 (235)
T ss_pred             EECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcc-----------CCCCCccc
Confidence            999996421 22222    223345566666544    44455556667999999976652           22346689


Q ss_pred             HHHHHHHHHHHHHHhhcC---CCcEEEEecC
Q 025786          221 GKAKKMAEDIILDFSKNS---DMAVLQCHRF  248 (248)
Q Consensus       221 ~~sK~a~e~l~~~~~~~~---gi~~~~v~Pf  248 (248)
                      +.+|++.+.+++.++.++   |+++++++|.
T Consensus       141 ~~sK~a~~~~~~~la~~~~~~gi~v~~v~pg  171 (235)
T PRK06550        141 TASKHALAGFTKQLALDYAKDGIQVFGIAPG  171 (235)
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEeeC
Confidence            999999999999999874   8999999984

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=99.87  E-value=1.3e-20  Score=155.53  Aligned_cols=160  Identities=18%  Similarity=0.146  Sum_probs=123.3

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-------
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-------  143 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-------  143 (248)
                      |.|+|||+-+|.|..+|++|.++|+.|++.+-.+...+.+..   +. . .++...++.||+++++++++.+.       
T Consensus        30 k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~---~~-~-s~rl~t~~LDVT~~esi~~a~~~V~~~l~~  104 (322)
T KOG1610|consen   30 KAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRG---ET-K-SPRLRTLQLDVTKPESVKEAAQWVKKHLGE  104 (322)
T ss_pred             cEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhh---hh-c-CCcceeEeeccCCHHHHHHHHHHHHHhccc
Confidence            889999999999999999999999999998843333332222   21 1 45788889999999999887763       


Q ss_pred             CCCCEEEEcccccc-cCCCCC----CchhhHhhhHHH----HHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCC
Q 025786          144 NAFDAVMHFAAVAY-VGESTL----DPLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQ  214 (248)
Q Consensus       144 ~~iD~li~~Ag~~~-~~~~~~----~~~~~~~~~~~~----~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~  214 (248)
                      .++-.||||||+.. .++.+-    +.....+.|..|    |+.++|.+++++ ||||++||..+-           .+.
T Consensus       105 ~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~ar-GRvVnvsS~~GR-----------~~~  172 (322)
T KOG1610|consen  105 DGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRAR-GRVVNVSSVLGR-----------VAL  172 (322)
T ss_pred             ccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhcc-CeEEEecccccC-----------ccC
Confidence            45889999999753 233222    223334455555    667888888876 699999997663           455


Q ss_pred             CCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          215 APINPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       215 ~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      +...+|+.||+++|.+..+++.|   +|+.|.++-|
T Consensus       173 p~~g~Y~~SK~aVeaf~D~lR~EL~~fGV~VsiieP  208 (322)
T KOG1610|consen  173 PALGPYCVSKFAVEAFSDSLRRELRPFGVKVSIIEP  208 (322)
T ss_pred             cccccchhhHHHHHHHHHHHHHHHHhcCcEEEEecc
Confidence            66789999999999999999988   7999999987

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.87  E-value=8e-21  Score=157.17  Aligned_cols=162  Identities=15%  Similarity=0.165  Sum_probs=117.2

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      ++++||||+|+||.++++.|+++|++|++++|+..+.   .+..+++...+.++.++++|+++.++++++++.     ++
T Consensus         6 ~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~---~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (253)
T PRK08217          6 KVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKL---EEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQ   82 (253)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHH---HHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            8999999999999999999999999999998654322   222222222245788899999999998887765     57


Q ss_pred             CCEEEEcccccccCCC---------CCCch----hhHhhhHHHHH----HHHHHHHHc-CCCEEEEeccceecCCCCCCC
Q 025786          146 FDAVMHFAAVAYVGES---------TLDPL----KYYHNITSNTL----VVLESMARH-GVDTLIYSSTCATYGEPEKMP  207 (248)
Q Consensus       146 iD~li~~Ag~~~~~~~---------~~~~~----~~~~~~~~~~~----~ll~~~~~~-~~~~iV~~SS~~~~g~~~~~~  207 (248)
                      +|+||||||.......         ...+.    ..++.|+.+..    .+++.+.+. ..++||++||...++.     
T Consensus        83 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~~~~~-----  157 (253)
T PRK08217         83 LNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIARAGN-----  157 (253)
T ss_pred             CCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEccccccCC-----
Confidence            9999999996432111         11122    23344444443    355566554 3468999999766542     


Q ss_pred             CCCCCCCCCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          208 ITEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       208 ~~e~~~~~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                             ++...|+.||++.+.++++++.+   .+++++.++|
T Consensus       158 -------~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~p  193 (253)
T PRK08217        158 -------MGQTNYSASKAGVAAMTVTWAKELARYGIRVAAIAP  193 (253)
T ss_pred             -------CCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEee
Confidence                   24678999999999999999976   6899999998

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=99.87  E-value=3e-21  Score=164.70  Aligned_cols=172  Identities=28%  Similarity=0.382  Sum_probs=136.3

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCC--CEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCC
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDS--YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFD  147 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD  147 (248)
                      +.+++||||+||+|++++.+|.+++  .+|.++|..+....-..+...   .....+.++.+|+.|..++..++.  ++ 
T Consensus         4 ~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~---~~~~~v~~~~~D~~~~~~i~~a~~--~~-   77 (361)
T KOG1430|consen    4 KLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTG---FRSGRVTVILGDLLDANSISNAFQ--GA-   77 (361)
T ss_pred             CCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhc---ccCCceeEEecchhhhhhhhhhcc--Cc-
Confidence            3799999999999999999999998  789999865432111111110   025689999999999999999887  56 


Q ss_pred             EEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCCC-CCCCCCCCCC--CCChHHHHH
Q 025786          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEK-MPITEETPQA--PINPYGKAK  224 (248)
Q Consensus       148 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~-~~~~e~~~~~--~~~~Y~~sK  224 (248)
                      .|+|+|+...+.....+.+..++.|+.+|.++++.|.+.+.+++||+||..+...... ..-+|+.|.+  ..++|+.||
T Consensus        78 ~Vvh~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~v~~lIYtSs~~Vvf~g~~~~n~~E~~p~p~~~~d~Y~~sK  157 (361)
T KOG1430|consen   78 VVVHCAASPVPDFVENDRDLAMRVNVNGTLNVIEACKELGVKRLIYTSSAYVVFGGEPIINGDESLPYPLKHIDPYGESK  157 (361)
T ss_pred             eEEEeccccCccccccchhhheeecchhHHHHHHHHHHhCCCEEEEecCceEEeCCeecccCCCCCCCccccccccchHH
Confidence            8888888765555555678889999999999999999999999999999988754333 4455665554  346999999


Q ss_pred             HHHHHHHHHHhhcCCCcEEEEec
Q 025786          225 KMAEDIILDFSKNSDMAVLQCHR  247 (248)
Q Consensus       225 ~a~e~l~~~~~~~~gi~~~~v~P  247 (248)
                      +.+|+++++.....++..+++||
T Consensus       158 a~aE~~Vl~an~~~~l~T~aLR~  180 (361)
T KOG1430|consen  158 ALAEKLVLEANGSDDLYTCALRP  180 (361)
T ss_pred             HHHHHHHHHhcCCCCeeEEEEcc
Confidence            99999999988767788999987

>PRK06924 short chain dehydrogenase; Provisional

Probab=99.87  E-value=7e-21  Score=157.65  Aligned_cols=162  Identities=15%  Similarity=0.117  Sum_probs=116.9

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~  144 (248)
                      ||+++||||+||||++++++|+++|++|++++|...  +...+..+.   ...++.++++|++|.+++++++++     +
T Consensus         1 ~k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~--~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   75 (251)
T PRK06924          1 MRYVIITGTSQGLGEAIANQLLEKGTHVISISRTEN--KELTKLAEQ---YNSNLTFHSLDLQDVHELETNFNEILSSIQ   75 (251)
T ss_pred             CcEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCch--HHHHHHHhc---cCCceEEEEecCCCHHHHHHHHHHHHHhcC
Confidence            589999999999999999999999999999987431  122221111   134688899999999999888865     1


Q ss_pred             --CC--CEEEEccccccc-CCCCCCchhhHhh----hHHH----HHHHHHHHHHc-CCCEEEEeccceecCCCCCCCCCC
Q 025786          145 --AF--DAVMHFAAVAYV-GESTLDPLKYYHN----ITSN----TLVVLESMARH-GVDTLIYSSTCATYGEPEKMPITE  210 (248)
Q Consensus       145 --~i--D~li~~Ag~~~~-~~~~~~~~~~~~~----~~~~----~~~ll~~~~~~-~~~~iV~~SS~~~~g~~~~~~~~e  210 (248)
                        ++  +++|||||...+ ....+.+.+.+..    |..+    +..+++.+.+. +.++||++||..++          
T Consensus        76 ~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~----------  145 (251)
T PRK06924         76 EDNVSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAK----------  145 (251)
T ss_pred             cccCCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhc----------
Confidence              12  289999997533 2232333333433    4333    45566777664 34689999996654          


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHhhc-----CCCcEEEEec
Q 025786          211 ETPQAPINPYGKAKKMAEDIILDFSKN-----SDMAVLQCHR  247 (248)
Q Consensus       211 ~~~~~~~~~Y~~sK~a~e~l~~~~~~~-----~gi~~~~v~P  247 (248)
                       .+.++...|+.+|++.+.+++.++.+     .+++++.|+|
T Consensus       146 -~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~~i~v~~v~P  186 (251)
T PRK06924        146 -NPYFGWSAYCSSKAGLDMFTQTVATEQEEEEYPVKIVAFSP  186 (251)
T ss_pred             -CCCCCcHHHhHHHHHHHHHHHHHHHHhhhcCCCeEEEEecC
Confidence             34556789999999999999999876     4799999988

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=99.87  E-value=5.2e-21  Score=158.22  Aligned_cols=165  Identities=16%  Similarity=0.137  Sum_probs=116.5

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCC--CHHHHHHHhhc-----
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG--DAKAVNKFFSE-----  143 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~--~~~~~~~~~~~-----  143 (248)
                      |+++||||+|+||.+++++|+++|++|++++|+....+...+.+++.  ...++.++.+|++  +++++.++++.     
T Consensus        13 k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~--~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~   90 (247)
T PRK08945         13 RIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAA--GGPQPAIIPLDLLTATPQNYQQLADTIEEQF   90 (247)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhc--CCCCceEEEecccCCCHHHHHHHHHHHHHHh
Confidence            89999999999999999999999999999997543222222222221  1235667777875  67777666543     


Q ss_pred             CCCCEEEEcccccccC-CCC----CCchhhHhhhHHHHHH----HHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCC
Q 025786          144 NAFDAVMHFAAVAYVG-EST----LDPLKYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQ  214 (248)
Q Consensus       144 ~~iD~li~~Ag~~~~~-~~~----~~~~~~~~~~~~~~~~----ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~  214 (248)
                      +++|+||||||..... +..    +..+..++.|..++..    +++.|.+.+.++||++||.....           +.
T Consensus        91 ~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~-----------~~  159 (247)
T PRK08945         91 GRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGRQ-----------GR  159 (247)
T ss_pred             CCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhhcC-----------CC
Confidence            5799999999975331 111    2233445566666444    45555667778999999966542           22


Q ss_pred             CCCChHHHHHHHHHHHHHHHhhcC---CCcEEEEecC
Q 025786          215 APINPYGKAKKMAEDIILDFSKNS---DMAVLQCHRF  248 (248)
Q Consensus       215 ~~~~~Y~~sK~a~e~l~~~~~~~~---gi~~~~v~Pf  248 (248)
                      +...+|+.||++++++++.++.++   ++++++++|.
T Consensus       160 ~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~~~~v~pg  196 (247)
T PRK08945        160 ANWGAYAVSKFATEGMMQVLADEYQGTNLRVNCINPG  196 (247)
T ss_pred             CCCcccHHHHHHHHHHHHHHHHHhcccCEEEEEEecC
Confidence            346689999999999999998874   6888888883

>PRK05884 short chain dehydrogenase; Provisional

Probab=99.87  E-value=7.3e-21  Score=155.26  Aligned_cols=151  Identities=15%  Similarity=0.102  Sum_probs=108.7

Q ss_pred             EEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc--CCCCEE
Q 025786           72 HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE--NAFDAV  149 (248)
Q Consensus        72 ~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~~iD~l  149 (248)
                      +++||||+||||+++++.|+++|++|++++|+.   +++.+..++.     ++.++++|++|.+++++++++  .++|+|
T Consensus         2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~---~~~~~~~~~~-----~~~~~~~D~~~~~~v~~~~~~~~~~id~l   73 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARR---DDLEVAAKEL-----DVDAIVCDNTDPASLEEARGLFPHHLDTI   73 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCH---HHHHHHHHhc-----cCcEEecCCCCHHHHHHHHHHHhhcCcEE
Confidence            699999999999999999999999999998643   2222222221     356789999999999988875  369999


Q ss_pred             EEccccccc---C---CCCC---CchhhHhhhHHHHHH----HHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCC
Q 025786          150 MHFAAVAYV---G---ESTL---DPLKYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (248)
Q Consensus       150 i~~Ag~~~~---~---~~~~---~~~~~~~~~~~~~~~----ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~  216 (248)
                      |||||....   .   ...+   ..+..++.|+.+...    +++.|.+  .++||++||.+.               ++
T Consensus        74 v~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~--~g~Iv~isS~~~---------------~~  136 (223)
T PRK05884         74 VNVPAPSWDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRS--GGSIISVVPENP---------------PA  136 (223)
T ss_pred             EECCCccccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhc--CCeEEEEecCCC---------------CC
Confidence            999985321   0   1111   122334455555433    5555543  379999998541               22


Q ss_pred             CChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          217 INPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      ...|++||++.+.+++.++.+   +|++++.|+|
T Consensus       137 ~~~Y~asKaal~~~~~~la~e~~~~gI~v~~v~P  170 (223)
T PRK05884        137 GSAEAAIKAALSNWTAGQAAVFGTRGITINAVAC  170 (223)
T ss_pred             ccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEec
Confidence            468999999999999999987   5799999998

>PRK12829 short chain dehydrogenase; Provisional

Probab=99.87  E-value=5.9e-21  Score=159.11  Aligned_cols=162  Identities=19%  Similarity=0.178  Sum_probs=116.9

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      ++++||||+|+||++++++|+++|++|++++|+...   ..+..+...  ..++.++.+|++|++++.+++++     ++
T Consensus        12 ~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~---~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   86 (264)
T PRK12829         12 LRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAA---LAATAARLP--GAKVTATVADVADPAQVERVFDTAVERFGG   86 (264)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHH---HHHHHHHHh--cCceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            899999999999999999999999999999874322   222222221  11568899999999999888865     57


Q ss_pred             CCEEEEccccccc-CCCC----CCchhhHhhhHHHHHHHHHH----HHHcCC-CEEEEeccceecCCCCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYV-GEST----LDPLKYYHNITSNTLVVLES----MARHGV-DTLIYSSTCATYGEPEKMPITEETPQA  215 (248)
Q Consensus       146 iD~li~~Ag~~~~-~~~~----~~~~~~~~~~~~~~~~ll~~----~~~~~~-~~iV~~SS~~~~g~~~~~~~~e~~~~~  215 (248)
                      +|+||||||.... ....    +.....++.|..++..++..    +...+. ++|+++||.+..           .+.+
T Consensus        87 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~-----------~~~~  155 (264)
T PRK12829         87 LDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGR-----------LGYP  155 (264)
T ss_pred             CCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecccccc-----------cCCC
Confidence            9999999997622 2111    22344556666665554444    444444 678888885543           1233


Q ss_pred             CCChHHHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          216 PINPYGKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                      +...|+.+|++.+.+++.++.+   .++++++++|.
T Consensus       156 ~~~~y~~~K~a~~~~~~~l~~~~~~~~i~~~~l~pg  191 (264)
T PRK12829        156 GRTPYAASKWAVVGLVKSLAIELGPLGIRVNAILPG  191 (264)
T ss_pred             CCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecC
Confidence            4568999999999999999876   48999999984

>PRK06198 short chain dehydrogenase; Provisional

Probab=99.87  E-value=1.8e-20  Score=155.95  Aligned_cols=163  Identities=17%  Similarity=0.180  Sum_probs=118.8

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCE-EEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYR-VTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~  144 (248)
                      |+++||||+|+||++++++|+++|++ |++++|...+.   .+...++...+.++.++.+|+++++++.++++.     +
T Consensus         7 k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~---~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   83 (260)
T PRK06198          7 KVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKG---EAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAFG   83 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHH---HHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            89999999999999999999999998 99888753222   222222222244678899999999999888765     5


Q ss_pred             CCCEEEEcccccccCCCCCCch----hhHhhhHHHHHH----HHHHHHHcC-CCEEEEeccceecCCCCCCCCCCCCCCC
Q 025786          145 AFDAVMHFAAVAYVGESTLDPL----KYYHNITSNTLV----VLESMARHG-VDTLIYSSTCATYGEPEKMPITEETPQA  215 (248)
Q Consensus       145 ~iD~li~~Ag~~~~~~~~~~~~----~~~~~~~~~~~~----ll~~~~~~~-~~~iV~~SS~~~~g~~~~~~~~e~~~~~  215 (248)
                      ++|+||||||........+...    ..+..|..+...    +++.+.+.+ .+++|++||...++.           .+
T Consensus        84 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~-----------~~  152 (260)
T PRK06198         84 RLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGG-----------QP  152 (260)
T ss_pred             CCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccC-----------CC
Confidence            7999999999764333222222    234555555444    445555443 468999999877642           23


Q ss_pred             CCChHHHHHHHHHHHHHHHhhcC---CCcEEEEec
Q 025786          216 PINPYGKAKKMAEDIILDFSKNS---DMAVLQCHR  247 (248)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~~~~~---gi~~~~v~P  247 (248)
                      ....|+.+|.+.+.+++.++.++   +++++.++|
T Consensus       153 ~~~~Y~~sK~a~~~~~~~~a~e~~~~~i~v~~i~p  187 (260)
T PRK06198        153 FLAAYCASKGALATLTRNAAYALLRNRIRVNGLNI  187 (260)
T ss_pred             CcchhHHHHHHHHHHHHHHHHHhcccCeEEEEEee
Confidence            36789999999999999998874   699999988

>PRK07326 short chain dehydrogenase; Provisional

Probab=99.87  E-value=2.5e-20  Score=153.03  Aligned_cols=163  Identities=18%  Similarity=0.130  Sum_probs=118.5

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      ++++||||+|+||++++++|+++|++|++++|++.+   ..+..+++... .++.++++|++|.+++.+++++     ++
T Consensus         7 ~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~---~~~~~~~l~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (237)
T PRK07326          7 KVALITGGSKGIGFAIAEALLAEGYKVAITARDQKE---LEEAAAELNNK-GNVLGLAADVRDEADVQRAVDAIVAAFGG   82 (237)
T ss_pred             CEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHH---HHHHHHHHhcc-CcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            899999999999999999999999999999875432   22222333222 4688899999999999888864     47


Q ss_pred             CCEEEEcccccccCCCCCCc----hhhHhhhHHHHHHHHHHHH---HcCCCEEEEeccceecCCCCCCCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYVGESTLDP----LKYYHNITSNTLVVLESMA---RHGVDTLIYSSTCATYGEPEKMPITEETPQAPIN  218 (248)
Q Consensus       146 iD~li~~Ag~~~~~~~~~~~----~~~~~~~~~~~~~ll~~~~---~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~  218 (248)
                      +|+|||+||........+..    ++.++.|..+...+++.+.   +.+.++||++||...+.           +..+..
T Consensus        83 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~-----------~~~~~~  151 (237)
T PRK07326         83 LDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISSLAGTN-----------FFAGGA  151 (237)
T ss_pred             CCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECChhhcc-----------CCCCCc
Confidence            99999999976443322222    2334555555555444332   33457899999976542           233466


Q ss_pred             hHHHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          219 PYGKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       219 ~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                      .|+.+|++.+.+++.++.+   .|+++++++|.
T Consensus       152 ~y~~sk~a~~~~~~~~~~~~~~~gi~v~~v~pg  184 (237)
T PRK07326        152 AYNASKFGLVGFSEAAMLDLRQYGIKVSTIMPG  184 (237)
T ss_pred             hHHHHHHHHHHHHHHHHHHhcccCcEEEEEeec
Confidence            8999999999999998755   58999999983

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.86  E-value=1.5e-21  Score=161.92  Aligned_cols=167  Identities=20%  Similarity=0.260  Sum_probs=104.8

Q ss_pred             EecCCchhHHHHHHHHHHCCC--EEEEEecCCCCcchhhhhhhhhcC----------CCCceEEEEccCCCH------HH
Q 025786           75 VTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELFP----------EPGRLQFIYADLGDA------KA  136 (248)
Q Consensus        75 ITGasg~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~----------~~~~~~~~~~Dl~~~------~~  136 (248)
                      |||||||||.+++++|++++.  +|+++.|.........+..+.+..          ...++.++.+|++++      ++
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~   80 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED   80 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence            799999999999999999987  899998854332222222122111          146899999999874      45


Q ss_pred             HHHHhhcCCCCEEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCC------
Q 025786          137 VNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITE------  210 (248)
Q Consensus       137 ~~~~~~~~~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e------  210 (248)
                      ...+.+  .+|+|||||+.....   ....+....|+.++.++++.+.+.+.++++|+||..+.+...+ .+.|      
T Consensus        81 ~~~L~~--~v~~IiH~Aa~v~~~---~~~~~~~~~NV~gt~~ll~la~~~~~~~~~~iSTa~v~~~~~~-~~~~~~~~~~  154 (249)
T PF07993_consen   81 YQELAE--EVDVIIHCAASVNFN---APYSELRAVNVDGTRNLLRLAAQGKRKRFHYISTAYVAGSRPG-TIEEKVYPEE  154 (249)
T ss_dssp             HHHHHH--H--EEEE--SS-SBS----S--EEHHHHHHHHHHHHHHHTSSS---EEEEEEGGGTTS-TT-T--SSS-HHH
T ss_pred             hhcccc--ccceeeecchhhhhc---ccchhhhhhHHHHHHHHHHHHHhccCcceEEeccccccCCCCC-cccccccccc
Confidence            556655  689999999976432   2445577899999999999998766669999999444443322 1211      


Q ss_pred             ----CCCCCCCChHHHHHHHHHHHHHHHhhcCCCcEEEEec
Q 025786          211 ----ETPQAPINPYGKAKKMAEDIILDFSKNSDMAVLQCHR  247 (248)
Q Consensus       211 ----~~~~~~~~~Y~~sK~a~e~l~~~~~~~~gi~~~~v~P  247 (248)
                          .......+.|..||..+|++++..+++.|++++++||
T Consensus       155 ~~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~~g~p~~I~Rp  195 (249)
T PF07993_consen  155 EDDLDPPQGFPNGYEQSKWVAERLLREAAQRHGLPVTIYRP  195 (249)
T ss_dssp             --EEE--TTSEE-HHHHHHHHHHHHHHHHHHH---EEEEEE
T ss_pred             cccchhhccCCccHHHHHHHHHHHHHHHHhcCCceEEEEec
Confidence                1123345689999999999999999988999999998

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=99.86  E-value=1.4e-20  Score=160.84  Aligned_cols=162  Identities=25%  Similarity=0.376  Sum_probs=121.7

Q ss_pred             EEEecCCchhHHHHHHHHHHCCC-EEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc--CCCCEE
Q 025786           73 VLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE--NAFDAV  149 (248)
Q Consensus        73 vlITGasg~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~~iD~l  149 (248)
                      ||||||+|+||+++++.|.++|+ +|++++|..+.. .    ....     ....+..|+.+.+.++.+.+.  .++|+|
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~-~----~~~~-----~~~~~~~d~~~~~~~~~~~~~~~~~~D~v   70 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH-K----FLNL-----ADLVIADYIDKEDFLDRLEKGAFGKIEAI   70 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch-h----hhhh-----hheeeeccCcchhHHHHHHhhccCCCCEE
Confidence            69999999999999999999998 788887543211 1    1111     113466788888777766542  479999


Q ss_pred             EEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCC-CCCCChHHHHHHHHH
Q 025786          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETP-QAPINPYGKAKKMAE  228 (248)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~-~~~~~~Y~~sK~a~e  228 (248)
                      ||+|+....  ...++...++.|+.++.++++.+.+.+. ++|++||.++|+.... +++|+.+ ..|.+.|+.||.++|
T Consensus        71 vh~A~~~~~--~~~~~~~~~~~n~~~~~~ll~~~~~~~~-~~v~~SS~~vy~~~~~-~~~e~~~~~~p~~~Y~~sK~~~e  146 (314)
T TIGR02197        71 FHQGACSDT--TETDGEYMMENNYQYSKRLLDWCAEKGI-PFIYASSAATYGDGEA-GFREGRELERPLNVYGYSKFLFD  146 (314)
T ss_pred             EECccccCc--cccchHHHHHHHHHHHHHHHHHHHHhCC-cEEEEccHHhcCCCCC-CcccccCcCCCCCHHHHHHHHHH
Confidence            999996432  2335566788899999999999988775 8999999999986543 4555554 457889999999999


Q ss_pred             HHHHHHhh--cCCCcEEEEecC
Q 025786          229 DIILDFSK--NSDMAVLQCHRF  248 (248)
Q Consensus       229 ~l~~~~~~--~~gi~~~~v~Pf  248 (248)
                      .+++.+..  ..+++++++||+
T Consensus       147 ~~~~~~~~~~~~~~~~~~lR~~  168 (314)
T TIGR02197       147 QYVRRRVLPEALSAQVVGLRYF  168 (314)
T ss_pred             HHHHHHhHhhccCCceEEEEEe
Confidence            99987543  246789999985

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.86  E-value=1.1e-20  Score=154.23  Aligned_cols=161  Identities=16%  Similarity=0.214  Sum_probs=113.2

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc---CCC
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE---NAF  146 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~---~~i  146 (248)
                      ||+++||||+|+||++++++|+++|++|++++|+..+.+.    +++.    .++.++.+|++|.+++++++++   +++
T Consensus         1 ~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~----~~~~----~~~~~~~~D~~d~~~~~~~~~~~~~~~i   72 (225)
T PRK08177          1 KRTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTA----LQAL----PGVHIEKLDMNDPASLDQLLQRLQGQRF   72 (225)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHH----HHhc----cccceEEcCCCCHHHHHHHHHHhhcCCC
Confidence            4789999999999999999999999999999976543221    1221    2567788999999999888875   479


Q ss_pred             CEEEEcccccccC--CCCCCchh----hHhhhHHHHHHHH----HHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCC
Q 025786          147 DAVMHFAAVAYVG--ESTLDPLK----YYHNITSNTLVVL----ESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (248)
Q Consensus       147 D~li~~Ag~~~~~--~~~~~~~~----~~~~~~~~~~~ll----~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~  216 (248)
                      |+||||||.....  +..+...+    .+..|..++..+.    +.+.+ +.++++++||......        ..+..+
T Consensus        73 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~iv~~ss~~g~~~--------~~~~~~  143 (225)
T PRK08177         73 DLLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRP-GQGVLAFMSSQLGSVE--------LPDGGE  143 (225)
T ss_pred             CEEEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhh-cCCEEEEEccCccccc--------cCCCCC
Confidence            9999999985331  11222222    3334444444443    44433 3368899988543311        012234


Q ss_pred             CChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          217 INPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      ...|+.+|++.+.+++.++.+   .+++++.++|
T Consensus       144 ~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~i~P  177 (225)
T PRK08177        144 MPLYKASKAALNSMTRSFVAELGEPTLTVLSMHP  177 (225)
T ss_pred             ccchHHHHHHHHHHHHHHHHHhhcCCeEEEEEcC
Confidence            567999999999999999877   5699999998

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=99.86  E-value=3.2e-21  Score=158.99  Aligned_cols=165  Identities=15%  Similarity=0.178  Sum_probs=127.2

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHH----HHHHhhcCCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKA----VNKFFSENAF  146 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~----~~~~~~~~~i  146 (248)
                      +.++|||||.|||++.+++|+++|.+|++++|+..+.+...+++.+..  ..++.++.+|.++.+.    +++.+...++
T Consensus        50 ~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~--~vev~~i~~Dft~~~~~ye~i~~~l~~~~V  127 (312)
T KOG1014|consen   50 SWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKY--KVEVRIIAIDFTKGDEVYEKLLEKLAGLDV  127 (312)
T ss_pred             CEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHh--CcEEEEEEEecCCCchhHHHHHHHhcCCce
Confidence            899999999999999999999999999999987666665555555543  3568889999987654    5555555678


Q ss_pred             CEEEEccccccc--CCCCCCchhhHh----hhHHH----HHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCC
Q 025786          147 DAVMHFAAVAYV--GESTLDPLKYYH----NITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (248)
Q Consensus       147 D~li~~Ag~~~~--~~~~~~~~~~~~----~~~~~----~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~  216 (248)
                      .+||||+|....  ....+.+++.++    .|..+    +..++|.|.+++.+.||++||.+..           .|.+.
T Consensus       128 gILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag~-----------~p~p~  196 (312)
T KOG1014|consen  128 GILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAGL-----------IPTPL  196 (312)
T ss_pred             EEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEecccccc-----------ccChh
Confidence            899999998763  222333332222    22222    6669999999888999999997664           45666


Q ss_pred             CChHHHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          217 INPYGKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                      ++.|++||+..+.+.+++.+|   +||.+..+-|+
T Consensus       197 ~s~ysasK~~v~~~S~~L~~Ey~~~gI~Vq~v~p~  231 (312)
T KOG1014|consen  197 LSVYSASKAFVDFFSRCLQKEYESKGIFVQSVIPY  231 (312)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCeEEEEeehh
Confidence            889999999999999999988   57888888775

>PRK07578 short chain dehydrogenase; Provisional

Probab=99.86  E-value=1.9e-20  Score=149.96  Aligned_cols=145  Identities=14%  Similarity=0.110  Sum_probs=109.3

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-CCCCEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-NAFDAV  149 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-~~iD~l  149 (248)
                      |+++||||+||||++++++|+++ ++|++++|+..                    .+++|++|.+++++++++ +++|+|
T Consensus         1 ~~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~--------------------~~~~D~~~~~~~~~~~~~~~~id~l   59 (199)
T PRK07578          1 MKILVIGASGTIGRAVVAELSKR-HEVITAGRSSG--------------------DVQVDITDPASIRALFEKVGKVDAV   59 (199)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC--------------------ceEecCCChHHHHHHHHhcCCCCEE
Confidence            47999999999999999999999 99999886321                    368999999999999886 589999


Q ss_pred             EEcccccccCCCCCCchhh----HhhhHHHHHHHHHHHHH--cCCCEEEEeccceecCCCCCCCCCCCCCCCCCChHHHH
Q 025786          150 MHFAAVAYVGESTLDPLKY----YHNITSNTLVVLESMAR--HGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKA  223 (248)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~----~~~~~~~~~~ll~~~~~--~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~s  223 (248)
                      |||||........+.+.+.    ++.|..++.++.+.+.+  .+.++|+++||....           .+.+....|+.|
T Consensus        60 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~~~-----------~~~~~~~~Y~~s  128 (199)
T PRK07578         60 VSAAGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGILSD-----------EPIPGGASAATV  128 (199)
T ss_pred             EECCCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcccccC-----------CCCCCchHHHHH
Confidence            9999975443332323333    34555555454443322  123689999986653           234457789999


Q ss_pred             HHHHHHHHHHHhhc--CCCcEEEEec
Q 025786          224 KKMAEDIILDFSKN--SDMAVLQCHR  247 (248)
Q Consensus       224 K~a~e~l~~~~~~~--~gi~~~~v~P  247 (248)
                      |++.+.+++.++.+  .|++++.++|
T Consensus       129 K~a~~~~~~~la~e~~~gi~v~~i~P  154 (199)
T PRK07578        129 NGALEGFVKAAALELPRGIRINVVSP  154 (199)
T ss_pred             HHHHHHHHHHHHHHccCCeEEEEEcC
Confidence            99999999999986  5899999998

>PLN02778 3,5-epimerase/4-reductase

Probab=99.86  E-value=1.8e-20  Score=159.37  Aligned_cols=144  Identities=15%  Similarity=0.176  Sum_probs=108.7

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li  150 (248)
                      |+||||||+||||+++++.|+++|++|+...                           .|+.|.+.+...+++.++|+||
T Consensus        10 ~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~---------------------------~~~~~~~~v~~~l~~~~~D~Vi   62 (298)
T PLN02778         10 LKFLIYGKTGWIGGLLGKLCQEQGIDFHYGS---------------------------GRLENRASLEADIDAVKPTHVF   62 (298)
T ss_pred             CeEEEECCCCHHHHHHHHHHHhCCCEEEEec---------------------------CccCCHHHHHHHHHhcCCCEEE
Confidence            7899999999999999999999999987421                           2344556666666655799999


Q ss_pred             EcccccccCC---CCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCC------CCCCCCCCCC-CCCChH
Q 025786          151 HFAAVAYVGE---STLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPE------KMPITEETPQ-APINPY  220 (248)
Q Consensus       151 ~~Ag~~~~~~---~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~------~~~~~e~~~~-~~~~~Y  220 (248)
                      |+||......   ...++.+.++.|..++.++++++++.+.+ ++++||..+|+...      +.+++|+.++ ++.+.|
T Consensus        63 H~Aa~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~gv~-~v~~sS~~vy~~~~~~p~~~~~~~~Ee~~p~~~~s~Y  141 (298)
T PLN02778         63 NAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRERGLV-LTNYATGCIFEYDDAHPLGSGIGFKEEDTPNFTGSFY  141 (298)
T ss_pred             ECCcccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCC-EEEEecceEeCCCCCCCcccCCCCCcCCCCCCCCCch
Confidence            9999764322   34567788999999999999999998875 45566666765322      2246765544 456899


Q ss_pred             HHHHHHHHHHHHHHhhcCCCcE
Q 025786          221 GKAKKMAEDIILDFSKNSDMAV  242 (248)
Q Consensus       221 ~~sK~a~e~l~~~~~~~~gi~~  242 (248)
                      +.||.++|.+++.++..+++++
T Consensus       142 g~sK~~~E~~~~~y~~~~~lr~  163 (298)
T PLN02778        142 SKTKAMVEELLKNYENVCTLRV  163 (298)
T ss_pred             HHHHHHHHHHHHHhhccEEeee
Confidence            9999999999998876655544

>PRK08017 oxidoreductase; Provisional

Probab=99.86  E-value=3.3e-20  Score=153.99  Aligned_cols=157  Identities=21%  Similarity=0.191  Sum_probs=115.6

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc------C
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE------N  144 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~------~  144 (248)
                      ++++||||+|+||.++++.|+++|++|++++|+..+.    +...+     ..+..+.+|++|.+++.++++.      +
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~----~~~~~-----~~~~~~~~D~~~~~~~~~~~~~i~~~~~~   73 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDV----ARMNS-----LGFTGILLDLDDPESVERAADEVIALTDN   73 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHh----HHHHh-----CCCeEEEeecCCHHHHHHHHHHHHHhcCC
Confidence            6899999999999999999999999999988754221    11111     1367789999999988776654      4


Q ss_pred             CCCEEEEcccccccCCCCCC----chhhHhhhHHHHHH----HHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCC
Q 025786          145 AFDAVMHFAAVAYVGESTLD----PLKYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (248)
Q Consensus       145 ~iD~li~~Ag~~~~~~~~~~----~~~~~~~~~~~~~~----ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~  216 (248)
                      ++|.+|||||.....+..+.    .++.++.|+.++..    +++.|.+.+.++||++||...+.           +.+.
T Consensus        74 ~~~~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~-----------~~~~  142 (256)
T PRK08017         74 RLYGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMGLI-----------STPG  142 (256)
T ss_pred             CCeEEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCEEEEEcCccccc-----------CCCC
Confidence            68999999997543332222    22345556555443    57888777778999999975542           2334


Q ss_pred             CChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          217 INPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      ...|+.||++.+.+.+.++.+   .++++++++|
T Consensus       143 ~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~p  176 (256)
T PRK08017        143 RGAYAASKYALEAWSDALRMELRHSGIKVSLIEP  176 (256)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEeC
Confidence            678999999999999887654   6899999988

>PLN02996 fatty acyl-CoA reductase

Probab=99.86  E-value=4.6e-20  Score=166.48  Aligned_cols=171  Identities=18%  Similarity=0.225  Sum_probs=123.6

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC---EEEEEecCCCCcchhhhhhhhh------------cC-C-----CCceEEEEc
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY---RVTIVDNLSRGNIGAVKVLQEL------------FP-E-----PGRLQFIYA  129 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~---~V~~~~r~~~~~~~~~~~~~~~------------~~-~-----~~~~~~~~~  129 (248)
                      |+|+|||||||||++++++|++.+.   +|+++.|.............++            .+ .     ..++.++.+
T Consensus        12 k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~i~G   91 (491)
T PLN02996         12 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTPVPG   91 (491)
T ss_pred             CeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEEEec
Confidence            8999999999999999999998653   6788887554332221110010            00 0     147899999


Q ss_pred             cCC-------CHHHHHHHhhcCCCCEEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHc-CCCEEEEeccceecC
Q 025786          130 DLG-------DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARH-GVDTLIYSSTCATYG  201 (248)
Q Consensus       130 Dl~-------~~~~~~~~~~~~~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~-~~~~iV~~SS~~~~g  201 (248)
                      |++       +.+.++++++  ++|+|||+|+....   ...+...+..|..++.++++++.+. +.+++|++||..+||
T Consensus        92 Dl~~~~LGLs~~~~~~~l~~--~vD~ViH~AA~v~~---~~~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V~vST~~vyG  166 (491)
T PLN02996         92 DISYDDLGVKDSNLREEMWK--EIDIVVNLAATTNF---DERYDVALGINTLGALNVLNFAKKCVKVKMLLHVSTAYVCG  166 (491)
T ss_pred             ccCCcCCCCChHHHHHHHHh--CCCEEEECccccCC---cCCHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeeEEec
Confidence            998       4455666666  68999999997643   2456778889999999999999875 578999999999998


Q ss_pred             CCCC----CCCCCCC-----------------------------------------------CCCCCChHHHHHHHHHHH
Q 025786          202 EPEK----MPITEET-----------------------------------------------PQAPINPYGKAKKMAEDI  230 (248)
Q Consensus       202 ~~~~----~~~~e~~-----------------------------------------------~~~~~~~Y~~sK~a~e~l  230 (248)
                      ...+    .++++..                                               ...+.+.|+.||+++|++
T Consensus       167 ~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pn~Y~~TK~~aE~l  246 (491)
T PLN02996        167 EKSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWPNTYVFTKAMGEML  246 (491)
T ss_pred             CCCceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCCCCCchHhhHHHHHHH
Confidence            6432    1111000                                               111345799999999999


Q ss_pred             HHHHhhcCCCcEEEEecC
Q 025786          231 ILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       231 ~~~~~~~~gi~~~~v~Pf  248 (248)
                      ++.++.  +++++++||+
T Consensus       247 v~~~~~--~lpv~i~RP~  262 (491)
T PLN02996        247 LGNFKE--NLPLVIIRPT  262 (491)
T ss_pred             HHHhcC--CCCEEEECCC
Confidence            988754  8999999997

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=99.86  E-value=5.5e-20  Score=150.88  Aligned_cols=162  Identities=20%  Similarity=0.179  Sum_probs=118.2

Q ss_pred             EEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CCCC
Q 025786           73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NAFD  147 (248)
Q Consensus        73 vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~iD  147 (248)
                      ++|||++|+||++++++|+++|++|++++|...  .......+.+...+.++.++.+|++|.+++++++++     +++|
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   78 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSE--EGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPID   78 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCch--hHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence            589999999999999999999999999987431  122222222322344688999999999999888764     5799


Q ss_pred             EEEEcccccccCCC----CCCchhhHhhhHHHHHHHHHHHH----HcCCCEEEEeccceecCCCCCCCCCCCCCCCCCCh
Q 025786          148 AVMHFAAVAYVGES----TLDPLKYYHNITSNTLVVLESMA----RHGVDTLIYSSTCATYGEPEKMPITEETPQAPINP  219 (248)
Q Consensus       148 ~li~~Ag~~~~~~~----~~~~~~~~~~~~~~~~~ll~~~~----~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~  219 (248)
                      +||||||.......    .+..+..+..|..++..+++.+.    +.+.+++|++||.+.+.           ..++...
T Consensus        79 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~-----------g~~~~~~  147 (239)
T TIGR01830        79 ILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLM-----------GNAGQAN  147 (239)
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccC-----------CCCCCch
Confidence            99999997543221    12334455666666666655554    34567999999965542           1233678


Q ss_pred             HHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          220 YGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       220 Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      |+.+|.+.+.+++.++.+   .|+++++++|
T Consensus       148 y~~~k~a~~~~~~~l~~~~~~~g~~~~~i~p  178 (239)
T TIGR01830       148 YAASKAGVIGFTKSLAKELASRNITVNAVAP  178 (239)
T ss_pred             hHHHHHHHHHHHHHHHHHHhhcCeEEEEEEE
Confidence            999999999999999876   5899999988

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.85  E-value=4e-20  Score=160.69  Aligned_cols=171  Identities=19%  Similarity=0.223  Sum_probs=123.5

Q ss_pred             EEEEecCCchhHHHHHHHHHHCC--CEEEEEecCCCCcch---hhhhhhhhcC---C-C-CceEEEEccCCCH------H
Q 025786           72 HVLVTGGAGYIGSHAALRLLKDS--YRVTIVDNLSRGNIG---AVKVLQELFP---E-P-GRLQFIYADLGDA------K  135 (248)
Q Consensus        72 ~vlITGasg~IG~~la~~L~~~G--~~V~~~~r~~~~~~~---~~~~~~~~~~---~-~-~~~~~~~~Dl~~~------~  135 (248)
                      +|+|||||||||++++++|+++|  ++|+++.|.......   ..+..+....   . . .++.++.+|++++      +
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~   80 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA   80 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence            58999999999999999999999  679999875432211   1111111110   0 1 4788999999754      4


Q ss_pred             HHHHHhhcCCCCEEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCC--
Q 025786          136 AVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETP--  213 (248)
Q Consensus       136 ~~~~~~~~~~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~--  213 (248)
                      .+..+.+  ++|+|||||+....   ..........|+.++.++++.+.+.+.++||++||.++|+.....+..|+.+  
T Consensus        81 ~~~~~~~--~~d~vih~a~~~~~---~~~~~~~~~~nv~g~~~ll~~a~~~~~~~~v~iSS~~v~~~~~~~~~~~~~~~~  155 (367)
T TIGR01746        81 EWERLAE--NVDTIVHNGALVNW---VYPYSELRAANVLGTREVLRLAASGRAKPLHYVSTISVLAAIDLSTVTEDDAIV  155 (367)
T ss_pred             HHHHHHh--hCCEEEeCCcEecc---CCcHHHHhhhhhHHHHHHHHHHhhCCCceEEEEccccccCCcCCCCcccccccc
Confidence            4555544  69999999997532   1234456678889999999999988877899999999987543332333332  


Q ss_pred             ---CCCCChHHHHHHHHHHHHHHHhhcCCCcEEEEecC
Q 025786          214 ---QAPINPYGKAKKMAEDIILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       214 ---~~~~~~Y~~sK~a~e~l~~~~~~~~gi~~~~v~Pf  248 (248)
                         ..+.+.|+.||.++|.+++.+..+ |++++++||.
T Consensus       156 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~-g~~~~i~Rpg  192 (367)
T TIGR01746       156 TPPPGLAGGYAQSKWVAELLVREASDR-GLPVTIVRPG  192 (367)
T ss_pred             ccccccCCChHHHHHHHHHHHHHHHhc-CCCEEEECCC
Confidence               123468999999999999987765 9999999984

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.85  E-value=2.2e-20  Score=145.68  Aligned_cols=157  Identities=14%  Similarity=0.090  Sum_probs=116.1

Q ss_pred             eEEEEecCC-chhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc------
Q 025786           71 THVLVTGGA-GYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE------  143 (248)
Q Consensus        71 k~vlITGas-g~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~------  143 (248)
                      |.|+|||++ ||||.+++++|.++|+.|+.+.|..+.-.   ++..+     .++...++|+++++++..+..+      
T Consensus         8 k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~---~L~~~-----~gl~~~kLDV~~~~~V~~v~~evr~~~~   79 (289)
T KOG1209|consen    8 KKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMA---QLAIQ-----FGLKPYKLDVSKPEEVVTVSGEVRANPD   79 (289)
T ss_pred             CeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHh---hHHHh-----hCCeeEEeccCChHHHHHHHHHHhhCCC
Confidence            889999866 89999999999999999999986443322   22111     2477899999999998776654      


Q ss_pred             CCCCEEEEcccccccCCCCCCc----hhhHhhhHHH----HHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCC
Q 025786          144 NAFDAVMHFAAVAYVGESTLDP----LKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (248)
Q Consensus       144 ~~iD~li~~Ag~~~~~~~~~~~----~~~~~~~~~~----~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~  215 (248)
                      +++|+||||||..-..+..+.+    +..++.|+-+    ++.+.+.+.+. .+.||++.|..++           .|.+
T Consensus        80 Gkld~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~lika-KGtIVnvgSl~~~-----------vpfp  147 (289)
T KOG1209|consen   80 GKLDLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKA-KGTIVNVGSLAGV-----------VPFP  147 (289)
T ss_pred             CceEEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHc-cceEEEecceeEE-----------eccc
Confidence            7899999999985444433332    3445555544    44455444444 4799999998887           3555


Q ss_pred             CCChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          216 PINPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      ..+.|.+||+|...+++.++.|   +|++|+.+-|
T Consensus       148 f~~iYsAsKAAihay~~tLrlEl~PFgv~Vin~it  182 (289)
T KOG1209|consen  148 FGSIYSASKAAIHAYARTLRLELKPFGVRVINAIT  182 (289)
T ss_pred             hhhhhhHHHHHHHHhhhhcEEeeeccccEEEEecc
Confidence            5678999999999999999987   6888876543

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.85  E-value=5.3e-20  Score=143.49  Aligned_cols=165  Identities=16%  Similarity=0.151  Sum_probs=120.2

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC-EEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~  144 (248)
                      ++++||||+|+||.+++++|+++|+ .|++++|+....+.....++++...+.++.++.+|+++++++++++++     +
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   80 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAALAAIPARLG   80 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            4799999999999999999999997 677777654433222211233322345788899999999988887764     5


Q ss_pred             CCCEEEEcccccccCCCC----CCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCCChH
Q 025786          145 AFDAVMHFAAVAYVGEST----LDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPY  220 (248)
Q Consensus       145 ~iD~li~~Ag~~~~~~~~----~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y  220 (248)
                      ++|+||||||........    +..+..++.|..++..+++.+.+.+.+++|++||....-           +......|
T Consensus        81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ii~~ss~~~~~-----------~~~~~~~y  149 (180)
T smart00822       81 PLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDLPLDFFVLFSSVAGVL-----------GNPGQANY  149 (180)
T ss_pred             CeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccCCcceEEEEccHHHhc-----------CCCCchhh
Confidence            689999999975433222    223345667777788888888777778999999865531           22346689


Q ss_pred             HHHHHHHHHHHHHHhhcCCCcEEEEec
Q 025786          221 GKAKKMAEDIILDFSKNSDMAVLQCHR  247 (248)
Q Consensus       221 ~~sK~a~e~l~~~~~~~~gi~~~~v~P  247 (248)
                      +.+|.+.+.+++.+.. .+++++.+.|
T Consensus       150 ~~sk~~~~~~~~~~~~-~~~~~~~~~~  175 (180)
T smart00822      150 AAANAFLDALAAHRRA-RGLPATSINW  175 (180)
T ss_pred             HHHHHHHHHHHHHHHh-cCCceEEEee
Confidence            9999999999977654 6888888875

It uses NADPH to reduce the keto group to a hydroxy group.

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=99.85  E-value=4.7e-20  Score=145.27  Aligned_cols=167  Identities=20%  Similarity=0.227  Sum_probs=120.1

Q ss_pred             eEEEEecCCchhHHHHHHHHHHC-CCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc------
Q 025786           71 THVLVTGGAGYIGSHAALRLLKD-SYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE------  143 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~------  143 (248)
                      +.++||||++|||..++++|++. |-++++..+  +..+.+.++++.......+++++++|+++.+++.+++++      
T Consensus         4 ksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~--r~~e~a~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~iVg   81 (249)
T KOG1611|consen    4 KSVFITGANRGIGLGLVKELLKDKGIEVIIATA--RDPEKAATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKIVG   81 (249)
T ss_pred             ccEEEeccCcchhHHHHHHHhcCCCcEEEEEec--CChHHhhHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhhcc
Confidence            67999999999999999999875 666666543  222222333444334467999999999999999888876      


Q ss_pred             -CCCCEEEEcccccccCC-CCCC----chhhHhhhHHH----HHHHHHHHHHcCCC-----------EEEEeccceecCC
Q 025786          144 -NAFDAVMHFAAVAYVGE-STLD----PLKYYHNITSN----TLVVLESMARHGVD-----------TLIYSSTCATYGE  202 (248)
Q Consensus       144 -~~iD~li~~Ag~~~~~~-~~~~----~~~~~~~~~~~----~~~ll~~~~~~~~~-----------~iV~~SS~~~~g~  202 (248)
                       .++|+||||||+...-. ..+.    ..+.++.|..+    ++.++|++++...+           .||++||.+.-  
T Consensus        82 ~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~s--  159 (249)
T KOG1611|consen   82 SDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAGS--  159 (249)
T ss_pred             cCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeeccccc--
Confidence             47999999999864322 2222    22344555444    67788988775433           79999885542  


Q ss_pred             CCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          203 PEKMPITEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       203 ~~~~~~~e~~~~~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                            .......++.+|..||+|...++++++-+   .++-++.+||
T Consensus       160 ------~~~~~~~~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihP  201 (249)
T KOG1611|consen  160 ------IGGFRPGGLSAYRMSKAALNMFAKSLSVDLKDDHILVVSIHP  201 (249)
T ss_pred             ------cCCCCCcchhhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecC
Confidence                  11134456889999999999999999977   4688888888

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.85  E-value=5.7e-20  Score=161.72  Aligned_cols=158  Identities=20%  Similarity=0.221  Sum_probs=120.6

Q ss_pred             CceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcC--CC
Q 025786           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSEN--AF  146 (248)
Q Consensus        69 ~~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~--~i  146 (248)
                      .+++|+||||||+||++++++|+++|++|++++|...+..... ...+......+++++.+|++|.+++.++++..  ++
T Consensus        59 ~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~-~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~~~  137 (390)
T PLN02657         59 KDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKN-GKEDTKKELPGAEVVFGDVTDADSLRKVLFSEGDPV  137 (390)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccc-hhhHHhhhcCCceEEEeeCCCHHHHHHHHHHhCCCC
Confidence            3489999999999999999999999999999987543221100 00111111236889999999999999998753  69


Q ss_pred             CEEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCCChHHHHHHH
Q 025786          147 DAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKM  226 (248)
Q Consensus       147 D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a  226 (248)
                      |+||||++....     ...+.++.+..++.++++.+++.+.++||++||.++++              |...|..+|..
T Consensus       138 D~Vi~~aa~~~~-----~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~~v~~--------------p~~~~~~sK~~  198 (390)
T PLN02657        138 DVVVSCLASRTG-----GVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAICVQK--------------PLLEFQRAKLK  198 (390)
T ss_pred             cEEEECCccCCC-----CCccchhhHHHHHHHHHHHHHHcCCCEEEEEeeccccC--------------cchHHHHHHHH
Confidence            999999984321     12345677888899999999999889999999977652              34579999999


Q ss_pred             HHHHHHHHhhcCCCcEEEEecC
Q 025786          227 AEDIILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       227 ~e~l~~~~~~~~gi~~~~v~Pf  248 (248)
                      .|..++.  .+.+++++++||.
T Consensus       199 ~E~~l~~--~~~gl~~tIlRp~  218 (390)
T PLN02657        199 FEAELQA--LDSDFTYSIVRPT  218 (390)
T ss_pred             HHHHHHh--ccCCCCEEEEccH
Confidence            9988765  4579999999993

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.85  E-value=1.3e-20  Score=152.94  Aligned_cols=174  Identities=26%  Similarity=0.300  Sum_probs=146.4

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCc-chhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGN-IGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~  148 (248)
                      +|++||||-||.-|+.|++.|+++||.|..+.|..+.. ..-....+.......++..+.+|++|...+.+++++.++|-
T Consensus         2 ~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v~PdE   81 (345)
T COG1089           2 GKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEVQPDE   81 (345)
T ss_pred             CceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhcCchh
Confidence            48999999999999999999999999999987643221 11111111111223458899999999999999999989999


Q ss_pred             EEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCC--CEEEEeccceecCCCCCCCCCCCCCCCCCChHHHHHHH
Q 025786          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV--DTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKM  226 (248)
Q Consensus       149 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~--~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a  226 (248)
                      |+|+|+.+..+.+.+.|+...+.+..++.++|++++--+.  -+|...||+..||.....|.+|++|..|.++|+.+|..
T Consensus        82 IYNLaAQS~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQAStSE~fG~v~~~pq~E~TPFyPrSPYAvAKlY  161 (345)
T COG1089          82 IYNLAAQSHVGVSFEQPEYTADVDAIGTLRLLEAIRILGEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLY  161 (345)
T ss_pred             heeccccccccccccCcceeeeechhHHHHHHHHHHHhCCcccEEEecccHHhhcCcccCccccCCCCCCCCHHHHHHHH
Confidence            9999999888888889998889999999999999987653  47888999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhcCCCcEE
Q 025786          227 AEDIILDFSKNSDMAVL  243 (248)
Q Consensus       227 ~e~l~~~~~~~~gi~~~  243 (248)
                      +..++..+++.+|+-.+
T Consensus       162 a~W~tvNYResYgl~Ac  178 (345)
T COG1089         162 AYWITVNYRESYGLFAC  178 (345)
T ss_pred             HHheeeehHhhcCceee
Confidence            99999999999886543

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.85  E-value=4.6e-20  Score=150.23  Aligned_cols=161  Identities=18%  Similarity=0.120  Sum_probs=114.6

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc---CCC
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE---NAF  146 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~---~~i  146 (248)
                      |++++||||+|+||++++++|+++|++|++++|+....+    .+..     ..+.++++|+++.+++++++++   .++
T Consensus         1 ~~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~----~~~~-----~~~~~~~~D~~~~~~v~~~~~~~~~~~~   71 (222)
T PRK06953          1 MKTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALA----ALQA-----LGAEALALDVADPASVAGLAWKLDGEAL   71 (222)
T ss_pred             CceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHH----HHHh-----ccceEEEecCCCHHHHHHHHHHhcCCCC
Confidence            589999999999999999999999999999987532211    1111     1356789999999999887643   469


Q ss_pred             CEEEEcccccccC--CCC----CCchhhHhhhHHHHHHHHHHHHH---cCCCEEEEecccee-cCCCCCCCCCCCCCCCC
Q 025786          147 DAVMHFAAVAYVG--EST----LDPLKYYHNITSNTLVVLESMAR---HGVDTLIYSSTCAT-YGEPEKMPITEETPQAP  216 (248)
Q Consensus       147 D~li~~Ag~~~~~--~~~----~~~~~~~~~~~~~~~~ll~~~~~---~~~~~iV~~SS~~~-~g~~~~~~~~e~~~~~~  216 (248)
                      |++|||||.....  ...    ++.+..++.|..++..+++.+.+   ...+++|++||... ++..         +..+
T Consensus        72 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~---------~~~~  142 (222)
T PRK06953         72 DAAVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSSRMGSIGDA---------TGTT  142 (222)
T ss_pred             CEEEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcCcccccccc---------cCCC
Confidence            9999999975322  111    22334556666666666555543   23468999988654 3321         1112


Q ss_pred             CChHHHHHHHHHHHHHHHhhcC-CCcEEEEecC
Q 025786          217 INPYGKAKKMAEDIILDFSKNS-DMAVLQCHRF  248 (248)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~~~~~-gi~~~~v~Pf  248 (248)
                      ...|+.+|.+.+.+++.++.++ +++++.++|.
T Consensus       143 ~~~Y~~sK~a~~~~~~~~~~~~~~i~v~~v~Pg  175 (222)
T PRK06953        143 GWLYRASKAALNDALRAASLQARHATCIALHPG  175 (222)
T ss_pred             ccccHHhHHHHHHHHHHHhhhccCcEEEEECCC
Confidence            2369999999999999998875 7899999883

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.85  E-value=8.1e-20  Score=148.81  Aligned_cols=158  Identities=16%  Similarity=0.180  Sum_probs=115.0

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-CCCCE
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-NAFDA  148 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-~~iD~  148 (248)
                      ||+++||||+|+||++++++|+++ ++|++++|+...   ..+..+..    ..+.++++|++|.+++.++++. +++|+
T Consensus         3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~---~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~id~   74 (227)
T PRK08219          3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAER---LDELAAEL----PGATPFPVDLTDPEAIAAAVEQLGRLDV   74 (227)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHH---HHHHHHHh----ccceEEecCCCCHHHHHHHHHhcCCCCE
Confidence            479999999999999999999999 999999875322   11111111    2477899999999999998875 46999


Q ss_pred             EEEcccccccCCCCCCchh----hHhhhHHH----HHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCCChH
Q 025786          149 VMHFAAVAYVGESTLDPLK----YYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPY  220 (248)
Q Consensus       149 li~~Ag~~~~~~~~~~~~~----~~~~~~~~----~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y  220 (248)
                      |||+||............+    .+..|..+    +..+++.+++. .+++|++||..+++           +.++..+|
T Consensus        75 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~v~~ss~~~~~-----------~~~~~~~y  142 (227)
T PRK08219         75 LVHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAA-HGHVVFINSGAGLR-----------ANPGWGSY  142 (227)
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCeEEEEcchHhcC-----------cCCCCchH
Confidence            9999997543322222222    24444444    45566666655 46899999977663           23346789


Q ss_pred             HHHHHHHHHHHHHHhhc-CC-CcEEEEec
Q 025786          221 GKAKKMAEDIILDFSKN-SD-MAVLQCHR  247 (248)
Q Consensus       221 ~~sK~a~e~l~~~~~~~-~g-i~~~~v~P  247 (248)
                      +.+|.+.+.+++.++.+ .+ ++++.++|
T Consensus       143 ~~~K~a~~~~~~~~~~~~~~~i~~~~i~p  171 (227)
T PRK08219        143 AASKFALRALADALREEEPGNVRVTSVHP  171 (227)
T ss_pred             HHHHHHHHHHHHHHHHHhcCCceEEEEec
Confidence            99999999999998876 34 78888887

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=99.84  E-value=1.1e-19  Score=149.04  Aligned_cols=158  Identities=13%  Similarity=0.127  Sum_probs=110.1

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCC--CEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-CCCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDS--YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-NAFD  147 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-~~iD  147 (248)
                      |+|+||||+||||++++++|+++|  +.|+..+|.....         .  ...++.++++|++|.++++++.++ +++|
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~---------~--~~~~~~~~~~Dls~~~~~~~~~~~~~~id   69 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD---------F--QHDNVQWHALDVTDEAEIKQLSEQFTQLD   69 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc---------c--ccCceEEEEecCCCHHHHHHHHHhcCCCC
Confidence            479999999999999999999985  5555555422110         1  124678899999999999887665 6899


Q ss_pred             EEEEcccccccC------CCCCCchh----hHhhhHHH----HHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCC
Q 025786          148 AVMHFAAVAYVG------ESTLDPLK----YYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETP  213 (248)
Q Consensus       148 ~li~~Ag~~~~~------~~~~~~~~----~~~~~~~~----~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~  213 (248)
                      +||||||.....      .....+.+    .+..|+.+    +..+++.|.+.+.++++++||....  .     . ..+
T Consensus        70 ~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~~~--~-----~-~~~  141 (235)
T PRK09009         70 WLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKVGS--I-----S-DNR  141 (235)
T ss_pred             EEEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeecccc--c-----c-cCC
Confidence            999999986421      11122222    23333333    4456777766666789999874321  0     0 012


Q ss_pred             CCCCChHHHHHHHHHHHHHHHhhc-----CCCcEEEEec
Q 025786          214 QAPINPYGKAKKMAEDIILDFSKN-----SDMAVLQCHR  247 (248)
Q Consensus       214 ~~~~~~Y~~sK~a~e~l~~~~~~~-----~gi~~~~v~P  247 (248)
                      .++...|+.||++.+.+++.++.+     .+++++.+.|
T Consensus       142 ~~~~~~Y~asK~a~~~~~~~la~e~~~~~~~i~v~~v~P  180 (235)
T PRK09009        142 LGGWYSYRASKAALNMFLKTLSIEWQRSLKHGVVLALHP  180 (235)
T ss_pred             CCCcchhhhhHHHHHHHHHHHHHHhhcccCCeEEEEEcc
Confidence            345678999999999999999976     3788988888

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.84  E-value=8.9e-20  Score=150.91  Aligned_cols=157  Identities=10%  Similarity=0.096  Sum_probs=102.3

Q ss_pred             CceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 025786           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (248)
Q Consensus        69 ~~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~  148 (248)
                      .+|+++||||+||||++++++|+++|++|++++|+...  ....    ... . ...++.+|++|.+++.+.+.  ++|+
T Consensus        13 ~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~--~~~~----~~~-~-~~~~~~~D~~~~~~~~~~~~--~iDi   82 (245)
T PRK12367         13 QGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKIN--NSES----NDE-S-PNEWIKWECGKEESLDKQLA--SLDV   82 (245)
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchh--hhhh----hcc-C-CCeEEEeeCCCHHHHHHhcC--CCCE
Confidence            34899999999999999999999999999999875311  1111    101 1 12568899999999887764  7999


Q ss_pred             EEEcccccccCCC-CCCchhhHhhhHHHHHH----HHHHHHHc---CCCEEEEeccceecCCCCCCCCCCCCCCCCCChH
Q 025786          149 VMHFAAVAYVGES-TLDPLKYYHNITSNTLV----VLESMARH---GVDTLIYSSTCATYGEPEKMPITEETPQAPINPY  220 (248)
Q Consensus       149 li~~Ag~~~~~~~-~~~~~~~~~~~~~~~~~----ll~~~~~~---~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y  220 (248)
                      ||||||....... .++..+.++.|..+...    +++.|.++   +.+.++..||.+...           + .....|
T Consensus        83 lVnnAG~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~~~-----------~-~~~~~Y  150 (245)
T PRK12367         83 LILNHGINPGGRQDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAEIQ-----------P-ALSPSY  150 (245)
T ss_pred             EEECCccCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEecccccC-----------C-CCCchh
Confidence            9999997533221 22334455667666444    55566552   223344445544331           1 134579


Q ss_pred             HHHHHHHHHHH---HHHhhc---CCCcEEEEec
Q 025786          221 GKAKKMAEDII---LDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       221 ~~sK~a~e~l~---~~~~~~---~gi~~~~v~P  247 (248)
                      ++||++.+.+.   ++++.+   .++.++.+.|
T Consensus       151 ~aSKaal~~~~~l~~~l~~e~~~~~i~v~~~~p  183 (245)
T PRK12367        151 EISKRLIGQLVSLKKNLLDKNERKKLIIRKLIL  183 (245)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcccccEEEEecC
Confidence            99999986543   333322   5777777766

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=99.84  E-value=1.9e-19  Score=149.01  Aligned_cols=160  Identities=18%  Similarity=0.177  Sum_probs=114.2

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCC--cchhhhhhhhhcCCC-CceEEEEccCCC-HHHHHHHhhc--
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRG--NIGAVKVLQELFPEP-GRLQFIYADLGD-AKAVNKFFSE--  143 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~-~~~~~~~~Dl~~-~~~~~~~~~~--  143 (248)
                      +|+++||||++|||+++++.|+++|++|+++.+....  .+...+...   ... ..+.+..+|+++ .++++.++++  
T Consensus         5 ~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~   81 (251)
T COG1028           5 GKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIK---EAGGGRAAAVAADVSDDEESVEALVAAAE   81 (251)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHH---hcCCCcEEEEEecCCCCHHHHHHHHHHHH
Confidence            4999999999999999999999999998888764332  112222211   111 357788899998 9988887765  


Q ss_pred             ---CCCCEEEEcccccccC-CCCCCchh----hHhhhHHH----HHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCC
Q 025786          144 ---NAFDAVMHFAAVAYVG-ESTLDPLK----YYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEE  211 (248)
Q Consensus       144 ---~~iD~li~~Ag~~~~~-~~~~~~~~----~~~~~~~~----~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~  211 (248)
                         +++|++|||||+.... ...+.+.+    .+..|..+    +..+.+.++++   +||++||.... ..        
T Consensus        82 ~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~---~Iv~isS~~~~-~~--------  149 (251)
T COG1028          82 EEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQ---RIVNISSVAGL-GG--------  149 (251)
T ss_pred             HHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhC---eEEEECCchhc-CC--------
Confidence               6799999999986542 33333323    33444443    22344455522   99999997664 21        


Q ss_pred             CCCCC-CChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          212 TPQAP-INPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       212 ~~~~~-~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                         .+ ..+|+.||++.+.+++.++.+   +|++++.++|
T Consensus       150 ---~~~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~P  186 (251)
T COG1028         150 ---PPGQAAYAASKAALIGLTKALALELAPRGIRVNAVAP  186 (251)
T ss_pred             ---CCCcchHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEe
Confidence               22 478999999999999999966   6899999998

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.84  E-value=1.7e-19  Score=161.74  Aligned_cols=160  Identities=15%  Similarity=0.094  Sum_probs=118.0

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      ++++||||+|+||+++++.|+++|++|+++++.. ..+...+..+++     ...++.+|++|.++++++++.     ++
T Consensus       211 ~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~-~~~~l~~~~~~~-----~~~~~~~Dv~~~~~~~~~~~~~~~~~g~  284 (450)
T PRK08261        211 KVALVTGAARGIGAAIAEVLARDGAHVVCLDVPA-AGEALAAVANRV-----GGTALALDITAPDAPARIAEHLAERHGG  284 (450)
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCc-cHHHHHHHHHHc-----CCeEEEEeCCCHHHHHHHHHHHHHhCCC
Confidence            8999999999999999999999999999988632 122222222222     235788999999999888765     47


Q ss_pred             CCEEEEcccccccCCCCCCc----hhhHhhhHHHHHHHHHHHHH----cCCCEEEEeccceecCCCCCCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYVGESTLDP----LKYYHNITSNTLVVLESMAR----HGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (248)
Q Consensus       146 iD~li~~Ag~~~~~~~~~~~----~~~~~~~~~~~~~ll~~~~~----~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (248)
                      +|+||||||+.......+.+    +..+..|..++..+.+.+..    ...++||++||.+.+.           +.+..
T Consensus       285 id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~-----------g~~~~  353 (450)
T PRK08261        285 LDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIA-----------GNRGQ  353 (450)
T ss_pred             CCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcC-----------CCCCC
Confidence            99999999986543332222    23445666667666666644    2347999999976652           22346


Q ss_pred             ChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          218 NPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      ..|+.+|++.+.+++.++.+   .|+++++++|
T Consensus       354 ~~Y~asKaal~~~~~~la~el~~~gi~v~~v~P  386 (450)
T PRK08261        354 TNYAASKAGVIGLVQALAPLLAERGITINAVAP  386 (450)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEe
Confidence            78999999999999999876   5899999988

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.84  E-value=1.4e-20  Score=142.45  Aligned_cols=161  Identities=19%  Similarity=0.155  Sum_probs=120.3

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-CCCCE
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-NAFDA  148 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-~~iD~  148 (248)
                      +++|++||+.-|||++++++|++.|+.|+.+.|.+   +.+....++.   +.-+..+.+|+++.+.+.+.+.. ..+|.
T Consensus         7 G~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~---a~L~sLV~e~---p~~I~Pi~~Dls~wea~~~~l~~v~pidg   80 (245)
T KOG1207|consen    7 GVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNE---ANLLSLVKET---PSLIIPIVGDLSAWEALFKLLVPVFPIDG   80 (245)
T ss_pred             ceEEEeecccccccHHHHHHHHhcCCEEEEEecCH---HHHHHHHhhC---CcceeeeEecccHHHHHHHhhcccCchhh
Confidence            49999999999999999999999999999998643   3333333332   34578899999998888887765 67999


Q ss_pred             EEEcccccccCCCCCCchhhHh----hhHHH----HHHHHHHHHHc-CCCEEEEeccceecCCCCCCCCCCCCCCCCCCh
Q 025786          149 VMHFAAVAYVGESTLDPLKYYH----NITSN----TLVVLESMARH-GVDTLIYSSTCATYGEPEKMPITEETPQAPINP  219 (248)
Q Consensus       149 li~~Ag~~~~~~~~~~~~~~~~----~~~~~----~~~ll~~~~~~-~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~  219 (248)
                      ++||||+....+..+-.++.++    .|+.+    ++.+..-+..+ -.+.||++||.+..           .+....+.
T Consensus        81 LVNNAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas~-----------R~~~nHtv  149 (245)
T KOG1207|consen   81 LVNNAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQASI-----------RPLDNHTV  149 (245)
T ss_pred             hhccchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhcc-----------cccCCceE
Confidence            9999998655554444444443    44333    23333334433 35689999997764           46667889


Q ss_pred             HHHHHHHHHHHHHHHhhcCC---CcEEEEec
Q 025786          220 YGKAKKMAEDIILDFSKNSD---MAVLQCHR  247 (248)
Q Consensus       220 Y~~sK~a~e~l~~~~~~~~g---i~~~~v~P  247 (248)
                      |+++|++..+++++++.|.|   |+++.+.|
T Consensus       150 YcatKaALDmlTk~lAlELGp~kIRVNsVNP  180 (245)
T KOG1207|consen  150 YCATKAALDMLTKCLALELGPQKIRVNSVNP  180 (245)
T ss_pred             EeecHHHHHHHHHHHHHhhCcceeEeeccCC
Confidence            99999999999999999965   77877776

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.84  E-value=1e-19  Score=153.94  Aligned_cols=170  Identities=21%  Similarity=0.238  Sum_probs=126.4

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCC-CEEEEEecCCCCcchhhhhhhh-hc-------CCCCceEEEEccCC------CHH
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDS-YRVTIVDNLSRGNIGAVKVLQE-LF-------PEPGRLQFIYADLG------DAK  135 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~-~~-------~~~~~~~~~~~Dl~------~~~  135 (248)
                      +++|+||||||+|.+++.+|+.+- .+|++..|.... +.+.+.+++ +.       ....+++.+.+|++      +..
T Consensus         1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~-E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~   79 (382)
T COG3320           1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSD-EAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSER   79 (382)
T ss_pred             CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCH-HHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHH
Confidence            479999999999999999999875 499999874432 222222222 21       12568999999998      345


Q ss_pred             HHHHHhhcCCCCEEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCCCCCC----CCC
Q 025786          136 AVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPI----TEE  211 (248)
Q Consensus       136 ~~~~~~~~~~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~----~e~  211 (248)
                      .+.++.+  .+|.|||||+...   ......+....|+.+|..++..+...+++.+.|+||.+++........    ++.
T Consensus        80 ~~~~La~--~vD~I~H~gA~Vn---~v~pYs~L~~~NVlGT~evlrLa~~gk~Kp~~yVSsisv~~~~~~~~~~~~~~~~  154 (382)
T COG3320          80 TWQELAE--NVDLIIHNAALVN---HVFPYSELRGANVLGTAEVLRLAATGKPKPLHYVSSISVGETEYYSNFTVDFDEI  154 (382)
T ss_pred             HHHHHhh--hcceEEecchhhc---ccCcHHHhcCcchHhHHHHHHHHhcCCCceeEEEeeeeeccccccCCCccccccc
Confidence            5666665  6999999999653   223445667789999999999998888888999999988754332211    111


Q ss_pred             C-----CCCCCChHHHHHHHHHHHHHHHhhcCCCcEEEEec
Q 025786          212 T-----PQAPINPYGKAKKMAEDIILDFSKNSDMAVLQCHR  247 (248)
Q Consensus       212 ~-----~~~~~~~Y~~sK~a~e~l~~~~~~~~gi~~~~v~P  247 (248)
                      .     ...+.+.|+.||.++|.+++...+. |++++++||
T Consensus       155 ~~~~~~~~~~~~GY~~SKwvaE~Lvr~A~~r-GLpv~I~Rp  194 (382)
T COG3320         155 SPTRNVGQGLAGGYGRSKWVAEKLVREAGDR-GLPVTIFRP  194 (382)
T ss_pred             cccccccCccCCCcchhHHHHHHHHHHHhhc-CCCeEEEec
Confidence            1     2334678999999999999998887 999999998

>CHL00194 ycf39 Ycf39; Provisional

Probab=99.84  E-value=1.8e-19  Score=154.61  Aligned_cols=145  Identities=18%  Similarity=0.205  Sum_probs=113.7

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li  150 (248)
                      |+|+||||||+||++++++|+++|++|++++|+..+.    ..+.     ...++++.+|++|++++.++++  ++|+||
T Consensus         1 MkIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~----~~l~-----~~~v~~v~~Dl~d~~~l~~al~--g~d~Vi   69 (317)
T CHL00194          1 MSLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKA----SFLK-----EWGAELVYGDLSLPETLPPSFK--GVTAII   69 (317)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHh----hhHh-----hcCCEEEECCCCCHHHHHHHHC--CCCEEE
Confidence            4799999999999999999999999999998753221    1111     1257889999999999999987  689999


Q ss_pred             EcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCCChHHHHHHHHHHH
Q 025786          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDI  230 (248)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e~l  230 (248)
                      |+++...     .++...++.+..++.++++++++.+.+++|++||.....             .+..+|..+|..+|.+
T Consensus        70 ~~~~~~~-----~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~~~~~-------------~~~~~~~~~K~~~e~~  131 (317)
T CHL00194         70 DASTSRP-----SDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSILNAEQ-------------YPYIPLMKLKSDIEQK  131 (317)
T ss_pred             ECCCCCC-----CCccchhhhhHHHHHHHHHHHHHcCCCEEEEeccccccc-------------cCCChHHHHHHHHHHH
Confidence            9876321     233446677888899999999999999999999853321             1235689999999987


Q ss_pred             HHHHhhcCCCcEEEEecC
Q 025786          231 ILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       231 ~~~~~~~~gi~~~~v~Pf  248 (248)
                      ++    +.+++++++||+
T Consensus       132 l~----~~~l~~tilRp~  145 (317)
T CHL00194        132 LK----KSGIPYTIFRLA  145 (317)
T ss_pred             HH----HcCCCeEEEeec
Confidence            75    468999999984

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.83  E-value=2.8e-19  Score=147.43  Aligned_cols=165  Identities=19%  Similarity=0.168  Sum_probs=127.5

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      .+|+|||||.|||.+++.++..+|++|.++.|+.++..++.+.++-... -..+.+..+|+.|++++..++++     +.
T Consensus        34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~-~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~  112 (331)
T KOG1210|consen   34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQ-VEDVSYKSVDVIDYDSVSKVIEELRDLEGP  112 (331)
T ss_pred             ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhc-cceeeEeccccccHHHHHHHHhhhhhccCC
Confidence            6899999999999999999999999999999766655555554443322 22377899999999999999987     57


Q ss_pred             CCEEEEcccccccCCCCCCchhh----HhhhHHHHHH----HHHHHHHcC-CCEEEEeccceecCCCCCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYVGESTLDPLKY----YHNITSNTLV----VLESMARHG-VDTLIYSSTCATYGEPEKMPITEETPQAP  216 (248)
Q Consensus       146 iD~li~~Ag~~~~~~~~~~~~~~----~~~~~~~~~~----ll~~~~~~~-~~~iV~~SS~~~~g~~~~~~~~e~~~~~~  216 (248)
                      +|.+|||||...++...+.+.+.    .+.|..++.+    .++.|++.. .++|+.+||..+.           .+...
T Consensus       113 ~d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~-----------~~i~G  181 (331)
T KOG1210|consen  113 IDNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAM-----------LGIYG  181 (331)
T ss_pred             cceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhh-----------cCccc
Confidence            99999999987766554444433    4456666555    555666554 5699999986653           24555


Q ss_pred             CChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          217 INPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      .++|+.||.+...+...+++|   +|+.++...|
T Consensus       182 ysaYs~sK~alrgLa~~l~qE~i~~~v~Vt~~~P  215 (331)
T KOG1210|consen  182 YSAYSPSKFALRGLAEALRQELIKYGVHVTLYYP  215 (331)
T ss_pred             ccccccHHHHHHHHHHHHHHHHhhcceEEEEEcC
Confidence            889999999999999999988   6899888876

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.83  E-value=8.5e-20  Score=154.89  Aligned_cols=165  Identities=10%  Similarity=-0.053  Sum_probs=101.6

Q ss_pred             ceEEEEecCC--chhHHHHHHHHHHCCCEEEEEecCC------CC--cchhhhhhh-------------hhcCCCCceEE
Q 025786           70 VTHVLVTGGA--GYIGSHAALRLLKDSYRVTIVDNLS------RG--NIGAVKVLQ-------------ELFPEPGRLQF  126 (248)
Q Consensus        70 ~k~vlITGas--g~IG~~la~~L~~~G~~V~~~~r~~------~~--~~~~~~~~~-------------~~~~~~~~~~~  126 (248)
                      +|+++||||+  +|||+++|++|+++|++|++.++.+      +.  ..+......             .+........-
T Consensus         8 gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~~~~   87 (299)
T PRK06300          8 GKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVPIYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDASFDTPED   87 (299)
T ss_pred             CCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccchhhhhhhhcccccccccccccccchhhhhhHHHhhhhcCCCEE
Confidence            3999999995  9999999999999999999976421      00  000000000             00000001122


Q ss_pred             EEccCCC--------HHHHHHHhhc-----CCCCEEEEcccccc--cCCCCCCchhhH----hhhHHH----HHHHHHHH
Q 025786          127 IYADLGD--------AKAVNKFFSE-----NAFDAVMHFAAVAY--VGESTLDPLKYY----HNITSN----TLVVLESM  183 (248)
Q Consensus       127 ~~~Dl~~--------~~~~~~~~~~-----~~iD~li~~Ag~~~--~~~~~~~~~~~~----~~~~~~----~~~ll~~~  183 (248)
                      +.+|+.+        .+++++++++     +++|+||||||...  ..+..+.+.+.|    +.|..+    ++.++|.|
T Consensus        88 v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~a~~p~m  167 (299)
T PRK06300         88 VPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSHFGPIM  167 (299)
T ss_pred             eecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHh
Confidence            2233322        1245555543     68999999998643  223333333333    444444    34467777


Q ss_pred             HHcCCCEEEEeccceecCCCCCCCCCCCCCCCCCC-hHHHHHHHHHHHHHHHhhc----CCCcEEEEec
Q 025786          184 ARHGVDTLIYSSTCATYGEPEKMPITEETPQAPIN-PYGKAKKMAEDIILDFSKN----SDMAVLQCHR  247 (248)
Q Consensus       184 ~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~-~Y~~sK~a~e~l~~~~~~~----~gi~~~~v~P  247 (248)
                      ++.  ++||++||....-           +.+... .|+.||++.+.+++.++.+    +||+++.|.|
T Consensus       168 ~~~--G~ii~iss~~~~~-----------~~p~~~~~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~P  223 (299)
T PRK06300        168 NPG--GSTISLTYLASMR-----------AVPGYGGGMSSAKAALESDTKVLAWEAGRRWGIRVNTISA  223 (299)
T ss_pred             hcC--CeEEEEeehhhcC-----------cCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEEe
Confidence            543  5899998865531           222233 7999999999999999976    3899999998

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.83  E-value=2.4e-19  Score=147.23  Aligned_cols=162  Identities=14%  Similarity=0.105  Sum_probs=113.5

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      ++|+||||+|+||.++++.|+++|++|++++|+....   .+..++... ..++.++++|+++.+++++++++     ++
T Consensus         6 ~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~---~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   81 (238)
T PRK05786          6 KKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKL---KRMKKTLSK-YGNIHYVVGDVSSTESARNVIEKAAKVLNA   81 (238)
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHH---HHHHHHHHh-cCCeEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            8999999999999999999999999999998754322   222122211 23678899999999999888765     46


Q ss_pred             CCEEEEcccccccCCCC--CCchhhHhhhHHHHHH----HHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCCCh
Q 025786          146 FDAVMHFAAVAYVGEST--LDPLKYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINP  219 (248)
Q Consensus       146 iD~li~~Ag~~~~~~~~--~~~~~~~~~~~~~~~~----ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~  219 (248)
                      +|.+||++|........  +..+..++.|..+...    +++.+.+  .+++|++||.....          .+.++...
T Consensus        82 id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~iv~~ss~~~~~----------~~~~~~~~  149 (238)
T PRK05786         82 IDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKE--GSSIVLVSSMSGIY----------KASPDQLS  149 (238)
T ss_pred             CCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhc--CCEEEEEecchhcc----------cCCCCchH
Confidence            89999999864322111  1112223444444333    4444432  36899999865421          12334568


Q ss_pred             HHHHHHHHHHHHHHHhhcC---CCcEEEEecC
Q 025786          220 YGKAKKMAEDIILDFSKNS---DMAVLQCHRF  248 (248)
Q Consensus       220 Y~~sK~a~e~l~~~~~~~~---gi~~~~v~Pf  248 (248)
                      |+.||++.+.+++.++.++   |+++++++|.
T Consensus       150 Y~~sK~~~~~~~~~~~~~~~~~gi~v~~i~pg  181 (238)
T PRK05786        150 YAVAKAGLAKAVEILASELLGRGIRVNGIAPT  181 (238)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcCeEEEEEecC
Confidence            9999999999999999874   8999999994

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.83  E-value=2.9e-19  Score=167.31  Aligned_cols=165  Identities=22%  Similarity=0.243  Sum_probs=122.8

Q ss_pred             eEEEEecCCchhHHHHHHHHH--HCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCH------HHHHHHhh
Q 025786           71 THVLVTGGAGYIGSHAALRLL--KDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDA------KAVNKFFS  142 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~--~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~------~~~~~~~~  142 (248)
                      |+||||||||+||++++++|+  ++|++|++++|... ...........  ...+++++.+|++|+      +.++++ +
T Consensus         1 m~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~-~~~~~~~~~~~--~~~~v~~~~~Dl~~~~~~~~~~~~~~l-~   76 (657)
T PRK07201          1 MRYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQS-LSRLEALAAYW--GADRVVPLVGDLTEPGLGLSEADIAEL-G   76 (657)
T ss_pred             CeEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcch-HHHHHHHHHhc--CCCcEEEEecccCCccCCcCHHHHHHh-c
Confidence            479999999999999999999  58999999997432 11111111111  124688999999984      455554 3


Q ss_pred             cCCCCEEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCC---CCCCCCh
Q 025786          143 ENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEET---PQAPINP  219 (248)
Q Consensus       143 ~~~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~---~~~~~~~  219 (248)
                        ++|+|||+||.....   ....+.+..|+.++.++++.+.+.+.+++|++||..+||.... +.+|+.   +..+.+.
T Consensus        77 --~~D~Vih~Aa~~~~~---~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~~SS~~v~g~~~~-~~~e~~~~~~~~~~~~  150 (657)
T PRK07201         77 --DIDHVVHLAAIYDLT---ADEEAQRAANVDGTRNVVELAERLQAATFHHVSSIAVAGDYEG-VFREDDFDEGQGLPTP  150 (657)
T ss_pred             --CCCEEEECceeecCC---CCHHHHHHHHhHHHHHHHHHHHhcCCCeEEEEeccccccCccC-ccccccchhhcCCCCc
Confidence              799999999975322   2345677889999999999999988889999999999975433 234433   2334568


Q ss_pred             HHHHHHHHHHHHHHHhhcCCCcEEEEecC
Q 025786          220 YGKAKKMAEDIILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       220 Y~~sK~a~e~l~~~~~~~~gi~~~~v~Pf  248 (248)
                      |+.||.++|++++.   ..+++++++||.
T Consensus       151 Y~~sK~~~E~~~~~---~~g~~~~ilRp~  176 (657)
T PRK07201        151 YHRTKFEAEKLVRE---ECGLPWRVYRPA  176 (657)
T ss_pred             hHHHHHHHHHHHHH---cCCCcEEEEcCC
Confidence            99999999999874   368999999994

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.83  E-value=3.5e-19  Score=160.28  Aligned_cols=167  Identities=15%  Similarity=0.121  Sum_probs=118.4

Q ss_pred             CceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhc----C--CCCceEEEEccCCCHHHHHHHhh
Q 025786           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELF----P--EPGRLQFIYADLGDAKAVNKFFS  142 (248)
Q Consensus        69 ~~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~----~--~~~~~~~~~~Dl~~~~~~~~~~~  142 (248)
                      .+++|+||||+||||++++++|+++|++|++++|+..+.+...+.+.+..    .  ...++.++.+|++|.+++.+.+.
T Consensus        79 ~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~aLg  158 (576)
T PLN03209         79 DEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPALG  158 (576)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHHhc
Confidence            34899999999999999999999999999999875443322222221110    0  11358899999999999988776


Q ss_pred             cCCCCEEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCCChHHH
Q 025786          143 ENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGK  222 (248)
Q Consensus       143 ~~~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~  222 (248)
                        ++|+||||||....  ...+....+..|..++.++++++.+.+.++||++||.+++...    ..+ ........|..
T Consensus       159 --giDiVVn~AG~~~~--~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSiga~~~g----~p~-~~~~sk~~~~~  229 (576)
T PLN03209        159 --NASVVICCIGASEK--EVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLGTNKVG----FPA-AILNLFWGVLC  229 (576)
T ss_pred             --CCCEEEEccccccc--cccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccchhcccC----ccc-cchhhHHHHHH
Confidence              79999999986432  1112344567788889999999998888999999998653110    000 01122345667


Q ss_pred             HHHHHHHHHHHHhhcCCCcEEEEecC
Q 025786          223 AKKMAEDIILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       223 sK~a~e~l~~~~~~~~gi~~~~v~Pf  248 (248)
                      .|..+|..+.    +.|+++++|||.
T Consensus       230 ~KraaE~~L~----~sGIrvTIVRPG  251 (576)
T PLN03209        230 WKRKAEEALI----ASGLPYTIVRPG  251 (576)
T ss_pred             HHHHHHHHHH----HcCCCEEEEECC
Confidence            7777776654    479999999984

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.80  E-value=2e-18  Score=143.31  Aligned_cols=163  Identities=19%  Similarity=0.166  Sum_probs=111.0

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCC-HHHHHHHhhcCCCCE
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD-AKAVNKFFSENAFDA  148 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~iD~  148 (248)
                      +|+|+||||||+||++++++|+++|++|+++.|+..+.   .+.    .....++.++.+|++| .+++.+.+. .++|+
T Consensus        17 ~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~---~~~----~~~~~~~~~~~~Dl~d~~~~l~~~~~-~~~d~   88 (251)
T PLN00141         17 TKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKA---KTS----LPQDPSLQIVRADVTEGSDKLVEAIG-DDSDA   88 (251)
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHH---HHh----cccCCceEEEEeeCCCCHHHHHHHhh-cCCCE
Confidence            48999999999999999999999999999887653221   111    1112368889999998 456655552 16899


Q ss_pred             EEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCC-CCCCCChHHHHHHHH
Q 025786          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEET-PQAPINPYGKAKKMA  227 (248)
Q Consensus       149 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~-~~~~~~~Y~~sK~a~  227 (248)
                      |||++|.....    .+...+..+..++.++++.+.+.+.++||++||.++|+...+.+..+.. ...+...|..+|..+
T Consensus        89 vi~~~g~~~~~----~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~~v~g~~~~~~~~~~~~~~~~~~~~~~~k~~~  164 (251)
T PLN00141         89 VICATGFRRSF----DPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSILVNGAAMGQILNPAYIFLNLFGLTLVAKLQA  164 (251)
T ss_pred             EEECCCCCcCC----CCCCceeeehHHHHHHHHHHHHcCCCEEEEEccccccCCCcccccCcchhHHHHHHHHHHHHHHH
Confidence            99999864211    1223345667788999999998888899999999988743322111110 001122234456666


Q ss_pred             HHHHHHHhhcCCCcEEEEecC
Q 025786          228 EDIILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       228 e~l~~~~~~~~gi~~~~v~Pf  248 (248)
                      |.+++    +.|++++++||.
T Consensus       165 e~~l~----~~gi~~~iirpg  181 (251)
T PLN00141        165 EKYIR----KSGINYTIVRPG  181 (251)
T ss_pred             HHHHH----hcCCcEEEEECC
Confidence            66554    468999999994

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=99.80  E-value=8.1e-19  Score=144.71  Aligned_cols=154  Identities=19%  Similarity=0.221  Sum_probs=110.6

Q ss_pred             cCC--chhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc------CCCCE
Q 025786           77 GGA--GYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE------NAFDA  148 (248)
Q Consensus        77 Gas--g~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~------~~iD~  148 (248)
                      |++  +|||++++++|+++|++|++++|+..+.+...+.+.+..  +  ..++++|+++++++++++++      +++|+
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~--~--~~~~~~D~~~~~~v~~~~~~~~~~~~g~iD~   76 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEY--G--AEVIQCDLSDEESVEALFDEAVERFGGRIDI   76 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHT--T--SEEEESCTTSHHHHHHHHHHHHHHHCSSESE
T ss_pred             CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHc--C--CceEeecCcchHHHHHHHHHHHhhcCCCeEE
Confidence            566  999999999999999999999975443222222222211  2  33699999999999988875      78999


Q ss_pred             EEEccccccc----CCCCCCchhhHhhhHHH--------HHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCC
Q 025786          149 VMHFAAVAYV----GESTLDPLKYYHNITSN--------TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (248)
Q Consensus       149 li~~Ag~~~~----~~~~~~~~~~~~~~~~~--------~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~  216 (248)
                      ||||+|....    .+..+.+.+.|...+..        ++.+++.|.+.  ++||++||....           .+.+.
T Consensus        77 lV~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--gsii~iss~~~~-----------~~~~~  143 (241)
T PF13561_consen   77 LVNNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKG--GSIINISSIAAQ-----------RPMPG  143 (241)
T ss_dssp             EEEEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHE--EEEEEEEEGGGT-----------SBSTT
T ss_pred             EEecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC--CCcccccchhhc-----------ccCcc
Confidence            9999997654    33333444455444333        33456655554  689999997654           23445


Q ss_pred             CChHHHHHHHHHHHHHHHhhc----CCCcEEEEec
Q 025786          217 INPYGKAKKMAEDIILDFSKN----SDMAVLQCHR  247 (248)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~~~~----~gi~~~~v~P  247 (248)
                      ...|+.+|++.+.+++.++.+    +||++++|.|
T Consensus       144 ~~~y~~sKaal~~l~r~lA~el~~~~gIrVN~V~p  178 (241)
T PF13561_consen  144 YSAYSASKAALEGLTRSLAKELAPKKGIRVNAVSP  178 (241)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHGGHGTEEEEEEEE
T ss_pred             chhhHHHHHHHHHHHHHHHHHhccccCeeeeeecc
Confidence            669999999999999999876    4799999988

...

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.80  E-value=1.6e-18  Score=162.47  Aligned_cols=148  Identities=16%  Similarity=0.139  Sum_probs=114.8

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li  150 (248)
                      |+||||||+|+||+++++.|.++|++|...                           ..|++|.+.+...+++.++|+||
T Consensus       381 mkiLVtGa~G~iG~~l~~~L~~~g~~v~~~---------------------------~~~l~d~~~v~~~i~~~~pd~Vi  433 (668)
T PLN02260        381 LKFLIYGRTGWIGGLLGKLCEKQGIAYEYG---------------------------KGRLEDRSSLLADIRNVKPTHVF  433 (668)
T ss_pred             ceEEEECCCchHHHHHHHHHHhCCCeEEee---------------------------ccccccHHHHHHHHHhhCCCEEE
Confidence            689999999999999999999999987421                           13577888888888777899999


Q ss_pred             EcccccccC---CCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCC------CCCCCCCCCCCC-CCChH
Q 025786          151 HFAAVAYVG---ESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEP------EKMPITEETPQA-PINPY  220 (248)
Q Consensus       151 ~~Ag~~~~~---~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~------~~~~~~e~~~~~-~~~~Y  220 (248)
                      |+|+.....   ..+.++.+.++.|..++.++++++++.+. ++|++||..+|+..      ...+++|+.++. +.++|
T Consensus       434 h~Aa~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~g~-~~v~~Ss~~v~~~~~~~~~~~~~p~~E~~~~~~~~~~Y  512 (668)
T PLN02260        434 NAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRENGL-LMMNFATGCIFEYDAKHPEGSGIGFKEEDKPNFTGSFY  512 (668)
T ss_pred             ECCcccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHcCC-eEEEEcccceecCCcccccccCCCCCcCCCCCCCCChh
Confidence            999976422   23457788899999999999999999887 46777887777531      134677776554 45899


Q ss_pred             HHHHHHHHHHHHHHhhcCCCcEEEEe
Q 025786          221 GKAKKMAEDIILDFSKNSDMAVLQCH  246 (248)
Q Consensus       221 ~~sK~a~e~l~~~~~~~~gi~~~~v~  246 (248)
                      +.||.++|.+++.+...+.+++.++.
T Consensus       513 g~sK~~~E~~~~~~~~~~~~r~~~~~  538 (668)
T PLN02260        513 SKTKAMVEELLREYDNVCTLRVRMPI  538 (668)
T ss_pred             hHHHHHHHHHHHhhhhheEEEEEEec
Confidence            99999999999988654555554443

>PLN02503 fatty acyl-CoA reductase 2

Probab=99.80  E-value=3.9e-18  Score=155.79  Aligned_cols=170  Identities=14%  Similarity=0.151  Sum_probs=122.2

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCC---EEEEEecCCCCcchhhhhhhhh------------cC------CCCceEEEE
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSY---RVTIVDNLSRGNIGAVKVLQEL------------FP------EPGRLQFIY  128 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~---~V~~~~r~~~~~~~~~~~~~~~------------~~------~~~~~~~~~  128 (248)
                      +|+|+|||||||||.+++++|++.+.   +|+++.|.........+..+++            .+      ...++.++.
T Consensus       119 ~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~v~  198 (605)
T PLN02503        119 GKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVPVV  198 (605)
T ss_pred             CCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEEEE
Confidence            38999999999999999999998764   6788887543322211111111            01      024688999


Q ss_pred             ccCCCH------HHHHHHhhcCCCCEEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHc-CCCEEEEeccceecC
Q 025786          129 ADLGDA------KAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARH-GVDTLIYSSTCATYG  201 (248)
Q Consensus       129 ~Dl~~~------~~~~~~~~~~~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~-~~~~iV~~SS~~~~g  201 (248)
                      +|++++      +..+.+.+  ++|+|||+|+....   ....+..++.|+.++.++++.+++. ..+++|++||..+||
T Consensus       199 GDl~d~~LGLs~~~~~~L~~--~vDiVIH~AA~v~f---~~~~~~a~~vNV~GT~nLLelA~~~~~lk~fV~vSTayVyG  273 (605)
T PLN02503        199 GNVCESNLGLEPDLADEIAK--EVDVIINSAANTTF---DERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVSTAYVNG  273 (605)
T ss_pred             eeCCCcccCCCHHHHHHHHh--cCCEEEECcccccc---ccCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEccCceeec
Confidence            999986      34455444  58999999997642   3456778889999999999999876 457899999999998


Q ss_pred             CCCCCCCCCCCC-----------------------------------------------------------CCCCChHHH
Q 025786          202 EPEKMPITEETP-----------------------------------------------------------QAPINPYGK  222 (248)
Q Consensus       202 ~~~~~~~~e~~~-----------------------------------------------------------~~~~~~Y~~  222 (248)
                      ...+ .+.|...                                                           ....+.|..
T Consensus       274 ~~~G-~i~E~~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~l~~~g~~~~~~~~~pNtYt~  352 (605)
T PLN02503        274 QRQG-RIMEKPFRMGDCIARELGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQKMKDLGLERAKLYGWQDTYVF  352 (605)
T ss_pred             CCCC-eeeeeecCcccccccccccccccccccccCCHHHHHHHHHHhhhcccchHHHHHHhhhcccchhhhCCCCChHHH
Confidence            6532 1111110                                                           111367999


Q ss_pred             HHHHHHHHHHHHhhcCCCcEEEEec
Q 025786          223 AKKMAEDIILDFSKNSDMAVLQCHR  247 (248)
Q Consensus       223 sK~a~e~l~~~~~~~~gi~~~~v~P  247 (248)
                      ||+.+|++++...  .+++++++||
T Consensus       353 TK~lAE~lV~~~~--~~LPv~IvRP  375 (605)
T PLN02503        353 TKAMGEMVINSMR--GDIPVVIIRP  375 (605)
T ss_pred             HHHHHHHHHHHhc--CCCCEEEEcC
Confidence            9999999998655  3799999999

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.79  E-value=5.4e-18  Score=148.79  Aligned_cols=155  Identities=16%  Similarity=0.145  Sum_probs=102.3

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~l  149 (248)
                      +|+++||||+||||++++++|+++|++|++++|+..   +..+....   ....+..+.+|++|.+++.+.+.  ++|++
T Consensus       178 gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~---~l~~~~~~---~~~~v~~v~~Dvsd~~~v~~~l~--~IDiL  249 (406)
T PRK07424        178 GKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSD---KITLEING---EDLPVKTLHWQVGQEAALAELLE--KVDIL  249 (406)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHH---HHHHHHhh---cCCCeEEEEeeCCCHHHHHHHhC--CCCEE
Confidence            389999999999999999999999999999886432   22211111   12346778999999999988775  79999


Q ss_pred             EEcccccccCC-CCCCchhhHhhhHHHHHH----HHHHHHHcCC----CEEEEeccceecCCCCCCCCCCCCCCCCCChH
Q 025786          150 MHFAAVAYVGE-STLDPLKYYHNITSNTLV----VLESMARHGV----DTLIYSSTCATYGEPEKMPITEETPQAPINPY  220 (248)
Q Consensus       150 i~~Ag~~~~~~-~~~~~~~~~~~~~~~~~~----ll~~~~~~~~----~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y  220 (248)
                      |||||...... ..++.++.++.|..++..    +++.|++.+.    +.+|++|+ +..            ..+....|
T Consensus       250 InnAGi~~~~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ss-a~~------------~~~~~~~Y  316 (406)
T PRK07424        250 IINHGINVHGERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSE-AEV------------NPAFSPLY  316 (406)
T ss_pred             EECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEcc-ccc------------cCCCchHH
Confidence            99999754322 112234456667766544    5555655432    34566654 221            11124579


Q ss_pred             HHHHHHHHHHHHHHhhcCCCcEEEE
Q 025786          221 GKAKKMAEDIILDFSKNSDMAVLQC  245 (248)
Q Consensus       221 ~~sK~a~e~l~~~~~~~~gi~~~~v  245 (248)
                      ++||++.+.++...+.+.++.+..+
T Consensus       317 ~ASKaAl~~l~~l~~~~~~~~I~~i  341 (406)
T PRK07424        317 ELSKRALGDLVTLRRLDAPCVVRKL  341 (406)
T ss_pred             HHHHHHHHHHHHHHHhCCCCceEEE
Confidence            9999999998754444445444333

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.77  E-value=2.6e-17  Score=130.05  Aligned_cols=162  Identities=18%  Similarity=0.259  Sum_probs=112.1

Q ss_pred             EEEEecCCchhHHHHHHHHHHCCC-EEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           72 HVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        72 ~vlITGasg~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      +++||||+|+||..+++.|+++|. +|+++.|+.....+..+.++++...+.++.++.+|++|++++.+++++     ++
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~~   81 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRFGP   81 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTSS-
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhccCC
Confidence            689999999999999999999986 899999873333333444555544567899999999999999999976     58


Q ss_pred             CCEEEEcccccccCCCCCCchhhHhh----hHHHHHHHHHHHHHcCCCEEEEeccceec-CCCCCCCCCCCCCCCCCChH
Q 025786          146 FDAVMHFAAVAYVGESTLDPLKYYHN----ITSNTLVVLESMARHGVDTLIYSSTCATY-GEPEKMPITEETPQAPINPY  220 (248)
Q Consensus       146 iD~li~~Ag~~~~~~~~~~~~~~~~~----~~~~~~~ll~~~~~~~~~~iV~~SS~~~~-g~~~~~~~~e~~~~~~~~~Y  220 (248)
                      +|.|||+||........+.+.+.+..    -+.++.++.+.+.......+|..||.... |.            ..+..|
T Consensus        82 i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~~l~~~i~~SSis~~~G~------------~gq~~Y  149 (181)
T PF08659_consen   82 IDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENRPLDFFILFSSISSLLGG------------PGQSAY  149 (181)
T ss_dssp             EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTTTTSEEEEEEEHHHHTT-------------TTBHHH
T ss_pred             cceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcCCCCeEEEECChhHhccC------------cchHhH
Confidence            99999999987554444444444433    34457777777777777889999997664 32            337789


Q ss_pred             HHHHHHHHHHHHHHhhcCCCcEEEEe
Q 025786          221 GKAKKMAEDIILDFSKNSDMAVLQCH  246 (248)
Q Consensus       221 ~~sK~a~e~l~~~~~~~~gi~~~~v~  246 (248)
                      +++-...+.+++.... .|.++.+|+
T Consensus       150 aaAN~~lda~a~~~~~-~g~~~~sI~  174 (181)
T PF08659_consen  150 AAANAFLDALARQRRS-RGLPAVSIN  174 (181)
T ss_dssp             HHHHHHHHHHHHHHHH-TTSEEEEEE
T ss_pred             HHHHHHHHHHHHHHHh-CCCCEEEEE
Confidence            9999999999987665 588877764

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=99.77  E-value=1.8e-17  Score=139.96  Aligned_cols=159  Identities=21%  Similarity=0.232  Sum_probs=110.8

Q ss_pred             EEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEEEc
Q 025786           73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVMHF  152 (248)
Q Consensus        73 vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li~~  152 (248)
                      ||||||+|+||++++++|+++|++|++++|+........           ...  ..|+.. +.+.+.+.  ++|+|||+
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-----------~~~--~~~~~~-~~~~~~~~--~~D~Vvh~   64 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTK-----------WEG--YKPWAP-LAESEALE--GADAVINL   64 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCccc-----------cee--eecccc-cchhhhcC--CCCEEEEC
Confidence            689999999999999999999999999997654321110           001  112222 23333443  68999999


Q ss_pred             ccccccCC--CCCCchhhHhhhHHHHHHHHHHHHHcCCC--EEEEeccceecCCCCCCCCCCCCCCCCCChHHHHHHHHH
Q 025786          153 AAVAYVGE--STLDPLKYYHNITSNTLVVLESMARHGVD--TLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAE  228 (248)
Q Consensus       153 Ag~~~~~~--~~~~~~~~~~~~~~~~~~ll~~~~~~~~~--~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e  228 (248)
                      ||......  ........++.|+.++.++++++.+.+.+  ++|++||...||.....+++|+.+..+.+.|+..|...|
T Consensus        65 a~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~i~~S~~~~yg~~~~~~~~E~~~~~~~~~~~~~~~~~e  144 (292)
T TIGR01777        65 AGEPIADKRWTEERKQEIRDSRIDTTRALVEAIAAAEQKPKVFISASAVGYYGTSEDRVFTEEDSPAGDDFLAELCRDWE  144 (292)
T ss_pred             CCCCcccccCCHHHHHHHHhcccHHHHHHHHHHHhcCCCceEEEEeeeEEEeCCCCCCCcCcccCCCCCChHHHHHHHHH
Confidence            99643211  11234556778889999999999988753  566667777888766667888876556666777777777


Q ss_pred             HHHHHHhhcCCCcEEEEecC
Q 025786          229 DIILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       229 ~l~~~~~~~~gi~~~~v~Pf  248 (248)
                      .....+ .+.+++++++||.
T Consensus       145 ~~~~~~-~~~~~~~~ilR~~  163 (292)
T TIGR01777       145 EAAQAA-EDLGTRVVLLRTG  163 (292)
T ss_pred             HHhhhc-hhcCCceEEEeee
Confidence            766644 3468999999984

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=99.76  E-value=2.2e-17  Score=169.55  Aligned_cols=167  Identities=16%  Similarity=0.171  Sum_probs=126.0

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHC-CCEEEEEecCCCCc-----------------------------------------
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKD-SYRVTIVDNLSRGN-----------------------------------------  107 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~-G~~V~~~~r~~~~~-----------------------------------------  107 (248)
                      ++++|||||++|||.+++++|+++ |++|++++|+....                                         
T Consensus      1997 g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~~ 2076 (2582)
T TIGR02813      1997 DDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRPV 2076 (2582)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhccccc
Confidence            489999999999999999999998 69999999862100                                         


Q ss_pred             ---chhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc----CCCCEEEEcccccccCCCCCCc----hhhHhhhHHHH
Q 025786          108 ---IGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----NAFDAVMHFAAVAYVGESTLDP----LKYYHNITSNT  176 (248)
Q Consensus       108 ---~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~----~~iD~li~~Ag~~~~~~~~~~~----~~~~~~~~~~~  176 (248)
                         .+..+.++.+...+.++.++.+|++|.+++.+++++    +++|+||||||+.......+.+    ...+..|+.++
T Consensus      2077 ~~~~ei~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv~G~ 2156 (2582)
T TIGR02813      2077 LSSLEIAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKTLQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKVDGL 2156 (2582)
T ss_pred             chhHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHHHHH
Confidence               001111222323355788999999999999888875    5799999999986554433333    33456677778


Q ss_pred             HHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHhhcC-CCcEEEEec
Q 025786          177 LVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNS-DMAVLQCHR  247 (248)
Q Consensus       177 ~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e~l~~~~~~~~-gi~~~~v~P  247 (248)
                      .++++.+.....++||++||.+++-           ....+..|+.+|.+...+++.++.++ ++++++++|
T Consensus      2157 ~~Ll~al~~~~~~~IV~~SSvag~~-----------G~~gqs~YaaAkaaL~~la~~la~~~~~irV~sI~w 2217 (2582)
T TIGR02813      2157 LSLLAALNAENIKLLALFSSAAGFY-----------GNTGQSDYAMSNDILNKAALQLKALNPSAKVMSFNW 2217 (2582)
T ss_pred             HHHHHHHHHhCCCeEEEEechhhcC-----------CCCCcHHHHHHHHHHHHHHHHHHHHcCCcEEEEEEC
Confidence            8888888776667899999977642           22346789999999999999999886 688888877

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.76  E-value=1.9e-17  Score=130.69  Aligned_cols=143  Identities=23%  Similarity=0.350  Sum_probs=111.5

Q ss_pred             EEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEEEc
Q 025786           73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVMHF  152 (248)
Q Consensus        73 vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li~~  152 (248)
                      |+|+||||++|+.++++|+++|++|+++.|++.+.+   +        ..+++++.+|+.|.+++.++++  ++|+||++
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~---~--------~~~~~~~~~d~~d~~~~~~al~--~~d~vi~~   67 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAE---D--------SPGVEIIQGDLFDPDSVKAALK--GADAVIHA   67 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHH---H--------CTTEEEEESCTTCHHHHHHHHT--TSSEEEEC
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhcc---c--------ccccccceeeehhhhhhhhhhh--hcchhhhh
Confidence            799999999999999999999999999997543221   1        3579999999999999999998  79999999


Q ss_pred             ccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHH
Q 025786          153 AAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIIL  232 (248)
Q Consensus       153 Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e~l~~  232 (248)
                      +|....        +     ...+.++++++++.+.+++|++||...|...........  .+....|...|..+|.+++
T Consensus        68 ~~~~~~--------~-----~~~~~~~~~a~~~~~~~~~v~~s~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~e~~~~  132 (183)
T PF13460_consen   68 AGPPPK--------D-----VDAAKNIIEAAKKAGVKRVVYLSSAGVYRDPPGLFSDED--KPIFPEYARDKREAEEALR  132 (183)
T ss_dssp             CHSTTT--------H-----HHHHHHHHHHHHHTTSSEEEEEEETTGTTTCTSEEEGGT--CGGGHHHHHHHHHHHHHHH
T ss_pred             hhhhcc--------c-----ccccccccccccccccccceeeeccccCCCCCccccccc--ccchhhhHHHHHHHHHHHH
Confidence            974321        1     556788999999999999999999998864332111101  1112568889988887774


Q ss_pred             HHhhcCCCcEEEEec
Q 025786          233 DFSKNSDMAVLQCHR  247 (248)
Q Consensus       233 ~~~~~~gi~~~~v~P  247 (248)
                          +.+++++++||
T Consensus       133 ----~~~~~~~ivrp  143 (183)
T PF13460_consen  133 ----ESGLNWTIVRP  143 (183)
T ss_dssp             ----HSTSEEEEEEE
T ss_pred             ----hcCCCEEEEEC
Confidence                35999999998

...

>PLN00016 RNA-binding protein; Provisional

Probab=99.75  E-value=2.2e-17  Score=144.92  Aligned_cols=152  Identities=18%  Similarity=0.235  Sum_probs=111.6

Q ss_pred             CCceEEEEe----cCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhh----hhhhhcCCCCceEEEEccCCCHHHHHH
Q 025786           68 EGVTHVLVT----GGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVK----VLQELFPEPGRLQFIYADLGDAKAVNK  139 (248)
Q Consensus        68 ~~~k~vlIT----Gasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~----~~~~~~~~~~~~~~~~~Dl~~~~~~~~  139 (248)
                      .++++||||    ||||+||++++++|+++|++|++++|..........    ...++.  ...++++.+|+.|   +.+
T Consensus        50 ~~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~--~~~v~~v~~D~~d---~~~  124 (378)
T PLN00016         50 VEKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELS--SAGVKTVWGDPAD---VKS  124 (378)
T ss_pred             cccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhh--hcCceEEEecHHH---HHh
Confidence            344789999    999999999999999999999999976433111100    001111  1247888999876   445


Q ss_pred             HhhcCCCCEEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCCCh
Q 025786          140 FFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINP  219 (248)
Q Consensus       140 ~~~~~~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~  219 (248)
                      ++...++|+|||+++..                ...+.++++++++.+.++||++||.++|+.....+..|..+..|.. 
T Consensus       125 ~~~~~~~d~Vi~~~~~~----------------~~~~~~ll~aa~~~gvkr~V~~SS~~vyg~~~~~p~~E~~~~~p~~-  187 (378)
T PLN00016        125 KVAGAGFDVVYDNNGKD----------------LDEVEPVADWAKSPGLKQFLFCSSAGVYKKSDEPPHVEGDAVKPKA-  187 (378)
T ss_pred             hhccCCccEEEeCCCCC----------------HHHHHHHHHHHHHcCCCEEEEEccHhhcCCCCCCCCCCCCcCCCcc-
Confidence            55434799999997521                2356788999998898999999999999876656677776655543 


Q ss_pred             HHHHHHHHHHHHHHHhhcCCCcEEEEecC
Q 025786          220 YGKAKKMAEDIILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       220 Y~~sK~a~e~l~~~~~~~~gi~~~~v~Pf  248 (248)
                         +|..+|.+++    +.+++++++||+
T Consensus       188 ---sK~~~E~~l~----~~~l~~~ilRp~  209 (378)
T PLN00016        188 ---GHLEVEAYLQ----KLGVNWTSFRPQ  209 (378)
T ss_pred             ---hHHHHHHHHH----HcCCCeEEEece
Confidence               8999998765    368999999984

>PRK05865 hypothetical protein; Provisional

Probab=99.73  E-value=1.1e-16  Score=150.98  Aligned_cols=126  Identities=25%  Similarity=0.334  Sum_probs=104.3

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li  150 (248)
                      |+|+||||+|+||++++++|+++|++|++++|.....         .   ..++.++.+|++|.+++.++++  ++|+||
T Consensus         1 MkILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~---------~---~~~v~~v~gDL~D~~~l~~al~--~vD~VV   66 (854)
T PRK05865          1 MRIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDS---------W---PSSADFIAADIRDATAVESAMT--GADVVA   66 (854)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhh---------c---ccCceEEEeeCCCHHHHHHHHh--CCCEEE
Confidence            4799999999999999999999999999998643110         0   1257789999999999999887  689999


Q ss_pred             EcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCCChHHHHHHHHHHH
Q 025786          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDI  230 (248)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e~l  230 (248)
                      |||+....         .++.|..++.+++++|.+.+.++||++||..                         |.++|++
T Consensus        67 HlAa~~~~---------~~~vNv~GT~nLLeAa~~~gvkr~V~iSS~~-------------------------K~aaE~l  112 (854)
T PRK05865         67 HCAWVRGR---------NDHINIDGTANVLKAMAETGTGRIVFTSSGH-------------------------QPRVEQM  112 (854)
T ss_pred             ECCCcccc---------hHHHHHHHHHHHHHHHHHcCCCeEEEECCcH-------------------------HHHHHHH
Confidence            99985321         4677888999999999998888999999821                         8888887


Q ss_pred             HHHHhhcCCCcEEEEecC
Q 025786          231 ILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       231 ~~~~~~~~gi~~~~v~Pf  248 (248)
                      ++    +++++++++||+
T Consensus       113 l~----~~gl~~vILRp~  126 (854)
T PRK05865        113 LA----DCGLEWVAVRCA  126 (854)
T ss_pred             HH----HcCCCEEEEEec
Confidence            74    368999999986

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.72  E-value=4.9e-17  Score=134.16  Aligned_cols=145  Identities=18%  Similarity=0.085  Sum_probs=106.1

Q ss_pred             HHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc--CCCCEEEEcccccccCCCCC
Q 025786           86 AALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE--NAFDAVMHFAAVAYVGESTL  163 (248)
Q Consensus        86 la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~~iD~li~~Ag~~~~~~~~~  163 (248)
                      ++++|+++|++|++++|+..+.    +          ...++++|++|.+++++++++  +++|+||||||....    .
T Consensus         1 ~a~~l~~~G~~Vv~~~r~~~~~----~----------~~~~~~~Dl~~~~~v~~~~~~~~~~iD~li~nAG~~~~----~   62 (241)
T PRK12428          1 TARLLRFLGARVIGVDRREPGM----T----------LDGFIQADLGDPASIDAAVAALPGRIDALFNIAGVPGT----A   62 (241)
T ss_pred             ChHHHHhCCCEEEEEeCCcchh----h----------hhHhhcccCCCHHHHHHHHHHhcCCCeEEEECCCCCCC----C
Confidence            4789999999999998753221    0          124578999999999999886  579999999997532    2


Q ss_pred             CchhhHhhhHHHHHHHHHHHHHc--CCCEEEEeccceecCCCCCCCCCCC----------------CCCCCCChHHHHHH
Q 025786          164 DPLKYYHNITSNTLVVLESMARH--GVDTLIYSSTCATYGEPEKMPITEE----------------TPQAPINPYGKAKK  225 (248)
Q Consensus       164 ~~~~~~~~~~~~~~~ll~~~~~~--~~~~iV~~SS~~~~g~~~~~~~~e~----------------~~~~~~~~Y~~sK~  225 (248)
                      ..+..++.|+.++..+.+.+.+.  ..++||++||.++++.....+..+.                .+.++..+|+.||+
T Consensus        63 ~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~  142 (241)
T PRK12428         63 PVELVARVNFLGLRHLTEALLPRMAPGGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVALATGYQLSKE  142 (241)
T ss_pred             CHHHhhhhchHHHHHHHHHHHHhccCCcEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccCCCcccHHHHHHH
Confidence            45566777887777666655432  2379999999988853221111111                34556789999999


Q ss_pred             HHHHHHHHHh-hc---CCCcEEEEecC
Q 025786          226 MAEDIILDFS-KN---SDMAVLQCHRF  248 (248)
Q Consensus       226 a~e~l~~~~~-~~---~gi~~~~v~Pf  248 (248)
                      +.+.+++.++ .+   +|+++++|+|.
T Consensus       143 a~~~~~~~la~~e~~~~girvn~v~PG  169 (241)
T PRK12428        143 ALILWTMRQAQPWFGARGIRVNCVAPG  169 (241)
T ss_pred             HHHHHHHHHHHHhhhccCeEEEEeecC
Confidence            9999999999 44   68999999983

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.71  E-value=7.6e-18  Score=127.56  Aligned_cols=160  Identities=23%  Similarity=0.310  Sum_probs=117.1

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      -+.+||||.+|+|++.++.|+++|+.|+++|--..+.   .+..+++   ++++.|...|+++++++..++..     ++
T Consensus        10 lvalvtggasglg~ataerlakqgasv~lldlp~skg---~~vakel---g~~~vf~padvtsekdv~aala~ak~kfgr   83 (260)
T KOG1199|consen   10 LVALVTGGASGLGKATAERLAKQGASVALLDLPQSKG---ADVAKEL---GGKVVFTPADVTSEKDVRAALAKAKAKFGR   83 (260)
T ss_pred             eeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccc---hHHHHHh---CCceEEeccccCcHHHHHHHHHHHHhhccc
Confidence            7899999999999999999999999999998533332   2333344   56899999999999999888765     79


Q ss_pred             CCEEEEcccccccC------CCCCCchh----hHhhhHHHHHHHHHH----HHHcC------CCEEEEeccceecCCCCC
Q 025786          146 FDAVMHFAAVAYVG------ESTLDPLK----YYHNITSNTLVVLES----MARHG------VDTLIYSSTCATYGEPEK  205 (248)
Q Consensus       146 iD~li~~Ag~~~~~------~~~~~~~~----~~~~~~~~~~~ll~~----~~~~~------~~~iV~~SS~~~~g~~~~  205 (248)
                      +|.++||||+....      .......+    .++.|..+|.+++..    |-++.      .+.||++.|.+.|..   
T Consensus        84 ld~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaafdg---  160 (260)
T KOG1199|consen   84 LDALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAFDG---  160 (260)
T ss_pred             eeeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeeecC---
Confidence            99999999974321      11112222    334455566665443    32221      357899999998843   


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          206 MPITEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       206 ~~~~e~~~~~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                              ...+.+|++||.+...++.-++++   .||+++.+.|
T Consensus       161 --------q~gqaaysaskgaivgmtlpiardla~~gir~~tiap  197 (260)
T KOG1199|consen  161 --------QTGQAAYSASKGAIVGMTLPIARDLAGDGIRFNTIAP  197 (260)
T ss_pred             --------ccchhhhhcccCceEeeechhhhhcccCceEEEeecc
Confidence                    334789999999999988888877   4799888877

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=99.70  E-value=6.8e-16  Score=155.37  Aligned_cols=173  Identities=18%  Similarity=0.196  Sum_probs=122.4

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCC----CEEEEEecCCCCcchhhhhhhhhc-------CCCCceEEEEccCCC-----
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDS----YRVTIVDNLSRGNIGAVKVLQELF-------PEPGRLQFIYADLGD-----  133 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G----~~V~~~~r~~~~~~~~~~~~~~~~-------~~~~~~~~~~~Dl~~-----  133 (248)
                      .++|+||||+|+||.+++++|++++    ++|+++.|................       ....++.++.+|+++     
T Consensus       971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lgl 1050 (1389)
T TIGR03443       971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFGL 1050 (1389)
T ss_pred             CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCCc
Confidence            3789999999999999999999987    788888875433222211111110       012368899999974     


Q ss_pred             -HHHHHHHhhcCCCCEEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCC--------
Q 025786          134 -AKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPE--------  204 (248)
Q Consensus       134 -~~~~~~~~~~~~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~--------  204 (248)
                       .+.+.++..  ++|+|||||+....   ..........|+.++.++++.+.+.+.++++++||.++|+...        
T Consensus      1051 ~~~~~~~l~~--~~d~iiH~Aa~~~~---~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~vSS~~v~~~~~~~~~~~~~ 1125 (1389)
T TIGR03443      1051 SDEKWSDLTN--EVDVIIHNGALVHW---VYPYSKLRDANVIGTINVLNLCAEGKAKQFSFVSSTSALDTEYYVNLSDEL 1125 (1389)
T ss_pred             CHHHHHHHHh--cCCEEEECCcEecC---ccCHHHHHHhHHHHHHHHHHHHHhCCCceEEEEeCeeecCcccccchhhhh
Confidence             345555544  68999999997532   1223334456889999999999988888999999999986321        


Q ss_pred             ----CCCCCCCCC-----CCCCChHHHHHHHHHHHHHHHhhcCCCcEEEEecC
Q 025786          205 ----KMPITEETP-----QAPINPYGKAKKMAEDIILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       205 ----~~~~~e~~~-----~~~~~~Y~~sK~a~e~l~~~~~~~~gi~~~~v~Pf  248 (248)
                          ...+.|..+     ..+.+.|+.||.++|.+++.++. .|++++++||+
T Consensus      1126 ~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~-~g~~~~i~Rpg 1177 (1389)
T TIGR03443      1126 VQAGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGK-RGLRGCIVRPG 1177 (1389)
T ss_pred             hhccCCCCCcccccccccccCCCChHHHHHHHHHHHHHHHh-CCCCEEEECCC
Confidence                112333322     22346799999999999998766 49999999985

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>PRK06720 hypothetical protein; Provisional

Probab=99.64  E-value=9.1e-15  Score=114.04  Aligned_cols=126  Identities=17%  Similarity=0.155  Sum_probs=85.3

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      |+++||||++|||+++++.|+++|++|++++|+....   .+..+++...+....++.+|+++.+++.+++++     ++
T Consensus        17 k~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~---~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G~   93 (169)
T PRK06720         17 KVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESG---QATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAFSR   93 (169)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHH---HHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            8999999999999999999999999999998654322   222223322234577889999999999887754     68


Q ss_pred             CCEEEEcccccccCC-CCCCchhhHhh-hHH----HHHHHHHHHHHcC-------CCEEEEecccee
Q 025786          146 FDAVMHFAAVAYVGE-STLDPLKYYHN-ITS----NTLVVLESMARHG-------VDTLIYSSTCAT  199 (248)
Q Consensus       146 iD~li~~Ag~~~~~~-~~~~~~~~~~~-~~~----~~~~ll~~~~~~~-------~~~iV~~SS~~~  199 (248)
                      +|++|||||...... ..+.+++.++. ++.    -+..+.+.+.+++       .+|+-.+||.+.
T Consensus        94 iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (169)
T PRK06720         94 IDMLFQNAGLYKIDSIFSRQQENDSNVLCINDVWIEIKQLTSSFMKQQEEVVLSDLPIFGIIGTKGQ  160 (169)
T ss_pred             CCEEEECCCcCCCCCcccccchhHhhceeccHHHHHHHHHHHHHHhcCCEEEeecCceeeEeccccc
Confidence            999999999865332 22222222221 111    2445666655543       467877887544

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.62  E-value=1.8e-15  Score=119.54  Aligned_cols=164  Identities=13%  Similarity=0.090  Sum_probs=107.3

Q ss_pred             CceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----
Q 025786           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (248)
Q Consensus        69 ~~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----  143 (248)
                      +.+.+|+||+|.|||..++..+.+++-+.....+.....+ ...+..   ..+........|++...-+.++++.     
T Consensus         5 ~r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~-~~~L~v---~~gd~~v~~~g~~~e~~~l~al~e~~r~k~   80 (253)
T KOG1204|consen    5 MRKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAE-LEGLKV---AYGDDFVHVVGDITEEQLLGALREAPRKKG   80 (253)
T ss_pred             cceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhccccc-ccceEE---EecCCcceechHHHHHHHHHHHHhhhhhcC
Confidence            3489999999999999999999888866544332111111 111100   1122333455666665555544443     


Q ss_pred             CCCCEEEEcccccccCC-------CCCCchhhHhhhHHH----HHHHHHHHHHcC-CCEEEEeccceecCCCCCCCCCCC
Q 025786          144 NAFDAVMHFAAVAYVGE-------STLDPLKYYHNITSN----TLVVLESMARHG-VDTLIYSSTCATYGEPEKMPITEE  211 (248)
Q Consensus       144 ~~iD~li~~Ag~~~~~~-------~~~~~~~~~~~~~~~----~~~ll~~~~~~~-~~~iV~~SS~~~~g~~~~~~~~e~  211 (248)
                      ++.|+||||||...+-.       ..+....+|+.|+..    +..+++.+++.. .+-+|++||.+..           
T Consensus        81 gkr~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav-----------  149 (253)
T KOG1204|consen   81 GKRDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAV-----------  149 (253)
T ss_pred             CceeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhh-----------
Confidence            67899999999754321       111233455555544    234666666663 4689999997665           


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHhhcC--CCcEEEEec
Q 025786          212 TPQAPINPYGKAKKMAEDIILDFSKNS--DMAVLQCHR  247 (248)
Q Consensus       212 ~~~~~~~~Y~~sK~a~e~l~~~~~~~~--gi~~~~v~P  247 (248)
                      .|...+..|+.+|+|.+++.+.++.|.  ++.+..+.|
T Consensus       150 ~p~~~wa~yc~~KaAr~m~f~~lA~EEp~~v~vl~~aP  187 (253)
T KOG1204|consen  150 RPFSSWAAYCSSKAARNMYFMVLASEEPFDVRVLNYAP  187 (253)
T ss_pred             ccccHHHHhhhhHHHHHHHHHHHhhcCccceeEEEccC
Confidence            467779999999999999999999774  788888877

>PRK12320 hypothetical protein; Provisional

Probab=99.59  E-value=4.1e-14  Score=131.07  Aligned_cols=103  Identities=21%  Similarity=0.285  Sum_probs=81.3

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li  150 (248)
                      |+||||||+||||++++++|+++|++|++++|....          .  ...+++++.+|++|.. +.+++.  ++|+||
T Consensus         1 MkILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~----------~--~~~~ve~v~~Dl~d~~-l~~al~--~~D~VI   65 (699)
T PRK12320          1 MQILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHD----------A--LDPRVDYVCASLRNPV-LQELAG--EADAVI   65 (699)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhh----------c--ccCCceEEEccCCCHH-HHHHhc--CCCEEE
Confidence            479999999999999999999999999999864211          0  0235788999999984 666665  689999


Q ss_pred             EcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccc
Q 025786          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTC  197 (248)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~  197 (248)
                      |+|+....        .....|..++.++++++++.+. ++|++||.
T Consensus        66 HLAa~~~~--------~~~~vNv~Gt~nLleAA~~~Gv-RiV~~SS~  103 (699)
T PRK12320         66 HLAPVDTS--------APGGVGITGLAHVANAAARAGA-RLLFVSQA  103 (699)
T ss_pred             EcCccCcc--------chhhHHHHHHHHHHHHHHHcCC-eEEEEECC
Confidence            99986321        1124678889999999998886 79999985

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=99.58  E-value=1.8e-14  Score=113.81  Aligned_cols=154  Identities=21%  Similarity=0.271  Sum_probs=125.6

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCC---EEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCC
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSY---RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAF  146 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~i  146 (248)
                      +++|+|||++|.+|++|.+.+.++|.   +-+...                        --.+|+++.++.++++++.++
T Consensus         1 s~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~------------------------skd~DLt~~a~t~~lF~~ekP   56 (315)
T KOG1431|consen    1 SKKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIG------------------------SKDADLTNLADTRALFESEKP   56 (315)
T ss_pred             CceEEEecCCchHHHHHHHHHHhcCCCCcceEEec------------------------cccccccchHHHHHHHhccCC
Confidence            48999999999999999999999886   122211                        124899999999999998889


Q ss_pred             CEEEEccccccc-CCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCC----CCCC-CChH
Q 025786          147 DAVMHFAAVAYV-GESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEET----PQAP-INPY  220 (248)
Q Consensus       147 D~li~~Ag~~~~-~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~----~~~~-~~~Y  220 (248)
                      ..|||.|+..+. -.....+.+++..|+..+-+++..+-+.+++++|+..|...|.+....|++|+.    |+.| ...|
T Consensus        57 thVIhlAAmVGGlf~N~~ynldF~r~Nl~indNVlhsa~e~gv~K~vsclStCIfPdkt~yPIdEtmvh~gpphpsN~gY  136 (315)
T KOG1431|consen   57 THVIHLAAMVGGLFHNNTYNLDFIRKNLQINDNVLHSAHEHGVKKVVSCLSTCIFPDKTSYPIDETMVHNGPPHPSNFGY  136 (315)
T ss_pred             ceeeehHhhhcchhhcCCCchHHHhhcceechhHHHHHHHhchhhhhhhcceeecCCCCCCCCCHHHhccCCCCCCchHH
Confidence            999999997542 234556778899999889999999999999999999899999988888999875    2333 3479


Q ss_pred             HHHHHHHHHHHHHHhhcCCCcEEEEec
Q 025786          221 GKAKKMAEDIILDFSKNSDMAVLQCHR  247 (248)
Q Consensus       221 ~~sK~a~e~l~~~~~~~~gi~~~~v~P  247 (248)
                      +.+|..+.-..+.++.++|-..+.+-|
T Consensus       137 syAKr~idv~n~aY~~qhg~~~tsviP  163 (315)
T KOG1431|consen  137 SYAKRMIDVQNQAYRQQHGRDYTSVIP  163 (315)
T ss_pred             HHHHHHHHHHHHHHHHHhCCceeeecc
Confidence            999988877779999999877777665

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=99.57  E-value=8.2e-14  Score=113.49  Aligned_cols=155  Identities=21%  Similarity=0.225  Sum_probs=98.7

Q ss_pred             EEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEEEc
Q 025786           73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVMHF  152 (248)
Q Consensus        73 vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li~~  152 (248)
                      |+||||||+||++++..|.+.||+|+++.|++...+...         ...+       ...+.+.+..+. ++|+|||+
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~---------~~~v-------~~~~~~~~~~~~-~~DavINL   63 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNL---------HPNV-------TLWEGLADALTL-GIDAVINL   63 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhc---------Cccc-------cccchhhhcccC-CCCEEEEC
Confidence            689999999999999999999999999998654432110         0011       112233333322 69999999


Q ss_pred             ccccccC--CCCCCchhhHhhhHHHHHHHHHHHHH--cCCCEEEEeccceecCCCCCCCCCCCCCCCCCChHHHHHHHHH
Q 025786          153 AAVAYVG--ESTLDPLKYYHNITSNTLVVLESMAR--HGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAE  228 (248)
Q Consensus       153 Ag~~~~~--~~~~~~~~~~~~~~~~~~~ll~~~~~--~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e  228 (248)
                      ||..-..  ...+..+...+.-+..|..+.+++.+  .+++.+|.-|.++.||......++|+.+.. .+--+..-..-|
T Consensus        64 AG~~I~~rrWt~~~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~~~~~~tE~~~~g-~~Fla~lc~~WE  142 (297)
T COG1090          64 AGEPIAERRWTEKQKEEIRQSRINTTEKLVELIAASETKPKVLISASAVGYYGHSGDRVVTEESPPG-DDFLAQLCQDWE  142 (297)
T ss_pred             CCCccccccCCHHHHHHHHHHHhHHHHHHHHHHHhccCCCcEEEecceEEEecCCCceeeecCCCCC-CChHHHHHHHHH
Confidence            9965332  23334445556666778999998874  345677777778889998888888884432 221111112223


Q ss_pred             HHHHHHhhcCCCcEEEEe
Q 025786          229 DIILDFSKNSDMAVLQCH  246 (248)
Q Consensus       229 ~l~~~~~~~~gi~~~~v~  246 (248)
                      ..+.. ++..|.+++.+|
T Consensus       143 ~~a~~-a~~~gtRvvllR  159 (297)
T COG1090         143 EEALQ-AQQLGTRVVLLR  159 (297)
T ss_pred             HHHhh-hhhcCceEEEEE
Confidence            33322 233588888776

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=99.56  E-value=1.6e-14  Score=115.56  Aligned_cols=168  Identities=24%  Similarity=0.282  Sum_probs=132.8

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcC-----CCCceEEEEccCCCHHHHHHHhhcC
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFP-----EPGRLQFIYADLGDAKAVNKFFSEN  144 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-----~~~~~~~~~~Dl~~~~~~~~~~~~~  144 (248)
                      .|.+||||-||.=|+.+++.|+.+||+|..+-|.+.+-  ....++.+..     .+.....+.+|++|...+.+++...
T Consensus        28 rkvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsF--NT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~i  105 (376)
T KOG1372|consen   28 RKVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSF--NTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTI  105 (376)
T ss_pred             ceEEEEecccCCCchHHHHHHHhCCceeeEEEeecccc--chhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhcc
Confidence            37999999999999999999999999999776533221  1122222222     2456778899999999999999888


Q ss_pred             CCCEEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCC---CEEEEeccceecCCCCCCCCCCCCCCCCCChHH
Q 025786          145 AFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV---DTLIYSSTCATYGEPEKMPITEETPQAPINPYG  221 (248)
Q Consensus       145 ~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~---~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~  221 (248)
                      +++-|+|+|+.+...-+.+-++-.-+....+++.++++++..+.   -++-..||...||.....|..|.+|.-|.++|+
T Consensus       106 kPtEiYnLaAQSHVkvSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~VrfYQAstSElyGkv~e~PQsE~TPFyPRSPYa  185 (376)
T KOG1372|consen  106 KPTEVYNLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIRACRLTEKVRFYQASTSELYGKVQEIPQSETTPFYPRSPYA  185 (376)
T ss_pred             CchhhhhhhhhcceEEEeecccceeeccchhhhhHHHHHHhcCcccceeEEecccHhhcccccCCCcccCCCCCCCChhH
Confidence            89999999998776555555555555666789999999987652   367778999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhhcCC
Q 025786          222 KAKKMAEDIILDFSKNSD  239 (248)
Q Consensus       222 ~sK~a~e~l~~~~~~~~g  239 (248)
                      ++|..+-.++-.+++.++
T Consensus       186 ~aKmy~~WivvNyREAYn  203 (376)
T KOG1372|consen  186 AAKMYGYWIVVNYREAYN  203 (376)
T ss_pred             HhhhhheEEEEEhHHhhc
Confidence            999988877777766655

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=99.55  E-value=1e-13  Score=117.08  Aligned_cols=130  Identities=18%  Similarity=0.139  Sum_probs=92.9

Q ss_pred             EEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc----CC-C
Q 025786           72 HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----NA-F  146 (248)
Q Consensus        72 ~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~----~~-i  146 (248)
                      +|+||||||+||++++++|+++|++|.++.|+..+..            ...+..+.+|+.|++++.++++.    .+ +
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~------------~~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~   68 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSA------------GPNEKHVKFDWLDEDTWDNPFSSDDGMEPEI   68 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc------------CCCCccccccCCCHHHHHHHHhcccCcCCce
Confidence            4899999999999999999999999999998654321            12455678999999999998842    24 8


Q ss_pred             CEEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCCChHHHHHHH
Q 025786          147 DAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKM  226 (248)
Q Consensus       147 D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a  226 (248)
                      |.++|+++...      ..       .....++++++++.+.++||++||...+..                  +.++..
T Consensus        69 d~v~~~~~~~~------~~-------~~~~~~~i~aa~~~gv~~~V~~Ss~~~~~~------------------~~~~~~  117 (285)
T TIGR03649        69 SAVYLVAPPIP------DL-------APPMIKFIDFARSKGVRRFVLLSASIIEKG------------------GPAMGQ  117 (285)
T ss_pred             eEEEEeCCCCC------Ch-------hHHHHHHHHHHHHcCCCEEEEeeccccCCC------------------CchHHH
Confidence            99999876321      00       123457888999999999999998554310                  012223


Q ss_pred             HHHHHHHHhhcCCCcEEEEec
Q 025786          227 AEDIILDFSKNSDMAVLQCHR  247 (248)
Q Consensus       227 ~e~l~~~~~~~~gi~~~~v~P  247 (248)
                      .+.++++   ..|++++++||
T Consensus       118 ~~~~l~~---~~gi~~tilRp  135 (285)
T TIGR03649       118 VHAHLDS---LGGVEYTVLRP  135 (285)
T ss_pred             HHHHHHh---ccCCCEEEEec
Confidence            3333322   14899999998

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=99.54  E-value=8.8e-14  Score=111.63  Aligned_cols=176  Identities=11%  Similarity=0.156  Sum_probs=116.8

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCE-----EEEEecCCCCcchhhhhhhhhcCC-CCceEEEEccCCCHHHHHHHhhc
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYR-----VTIVDNLSRGNIGAVKVLQELFPE-PGRLQFIYADLGDAKAVNKFFSE  143 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~-----V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~  143 (248)
                      .|.++|||+++|||.++|..|++...+     +++.+|+..+.++....+++..+. .-+++++.+|+++..++.++.++
T Consensus         3 RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~d   82 (341)
T KOG1478|consen    3 RKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASKD   82 (341)
T ss_pred             ceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHHH
Confidence            388999999999999999999987543     566788777777666666665442 34788999999999998887765


Q ss_pred             -----CCCCEEEEcccccccCCC-------------------------------CCCchhhHhhhHHH----HHHHHHHH
Q 025786          144 -----NAFDAVMHFAAVAYVGES-------------------------------TLDPLKYYHNITSN----TLVVLESM  183 (248)
Q Consensus       144 -----~~iD~li~~Ag~~~~~~~-------------------------------~~~~~~~~~~~~~~----~~~ll~~~  183 (248)
                           .++|.|+-|||++..+..                               .+.-.+.++.|+-|    ...+.|.+
T Consensus        83 i~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~pll  162 (341)
T KOG1478|consen   83 IKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELEPLL  162 (341)
T ss_pred             HHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhhhHh
Confidence                 579999999998643211                               01112223333333    22356666


Q ss_pred             HHcCCCEEEEeccceecCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          184 ARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       184 ~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      -......+|.+||..+--..  ..+..-.....-.+|..||.+...+--++.+.   .|+.-.+++|
T Consensus       163 ~~~~~~~lvwtSS~~a~kk~--lsleD~q~~kg~~pY~sSKrl~DlLh~A~~~~~~~~g~~qyvv~p  227 (341)
T KOG1478|consen  163 CHSDNPQLVWTSSRMARKKN--LSLEDFQHSKGKEPYSSSKRLTDLLHVALNRNFKPLGINQYVVQP  227 (341)
T ss_pred             hcCCCCeEEEEeeccccccc--CCHHHHhhhcCCCCcchhHHHHHHHHHHHhccccccchhhhcccC
Confidence            55555699999996553111  00111112344568999999998877666555   3566666665

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=99.46  E-value=1.8e-12  Score=111.73  Aligned_cols=87  Identities=17%  Similarity=-0.004  Sum_probs=63.7

Q ss_pred             CceEEEEecCCchhHHH--HHHHHHHCCCEEEEEecCCCCcch---------hhhhhhhhcCCCCceEEEEccCCCHHHH
Q 025786           69 GVTHVLVTGGAGYIGSH--AALRLLKDSYRVTIVDNLSRGNIG---------AVKVLQELFPEPGRLQFIYADLGDAKAV  137 (248)
Q Consensus        69 ~~k~vlITGasg~IG~~--la~~L~~~G~~V~~~~r~~~~~~~---------~~~~~~~~~~~~~~~~~~~~Dl~~~~~~  137 (248)
                      ++|++||||+++|||.+  +++.| ++|++|+++++.....+.         .....+.....+..+..+.+|+++.+++
T Consensus        40 ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~v  118 (398)
T PRK13656         40 GPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEIK  118 (398)
T ss_pred             CCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHH
Confidence            45999999999999999  89999 999999888742211110         0111111112234567889999999999


Q ss_pred             HHHhhc-----CCCCEEEEccccc
Q 025786          138 NKFFSE-----NAFDAVMHFAAVA  156 (248)
Q Consensus       138 ~~~~~~-----~~iD~li~~Ag~~  156 (248)
                      ++++++     +++|+||||+|..
T Consensus       119 ~~lie~I~e~~G~IDiLVnSaA~~  142 (398)
T PRK13656        119 QKVIELIKQDLGQVDLVVYSLASP  142 (398)
T ss_pred             HHHHHHHHHhcCCCCEEEECCccC
Confidence            888876     7899999999975

>KOG2774 consensus NAD dependent epimerase [General function prediction only]

Probab=99.44  E-value=3.4e-13  Score=107.29  Aligned_cols=164  Identities=21%  Similarity=0.252  Sum_probs=124.1

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHC-CC-EEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCC
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKD-SY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFD  147 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~-G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD  147 (248)
                      ..+|||||+-|-+|..++..|..+ |- .|++.|......        ..   -..-.++..|+.|...+++++-..++|
T Consensus        44 ~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp~--------~V---~~~GPyIy~DILD~K~L~eIVVn~RId  112 (366)
T KOG2774|consen   44 APRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPPA--------NV---TDVGPYIYLDILDQKSLEEIVVNKRID  112 (366)
T ss_pred             CCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCch--------hh---cccCCchhhhhhccccHHHhhcccccc
Confidence            378999999999999999998766 54 455544221110        01   112356889999999999999888999


Q ss_pred             EEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCC-CCCCCCCCCCCCCCChHHHHHHH
Q 025786          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEP-EKMPITEETPQAPINPYGKAKKM  226 (248)
Q Consensus       148 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~-~~~~~~e~~~~~~~~~Y~~sK~a  226 (248)
                      .+||..+.... ..+.+..-....|+.+..++++.+++.+. ++...|++++||.. ..+|.+.-+...|.+.||.||..
T Consensus       113 WL~HfSALLSA-vGE~NVpLA~~VNI~GvHNil~vAa~~kL-~iFVPSTIGAFGPtSPRNPTPdltIQRPRTIYGVSKVH  190 (366)
T KOG2774|consen  113 WLVHFSALLSA-VGETNVPLALQVNIRGVHNILQVAAKHKL-KVFVPSTIGAFGPTSPRNPTPDLTIQRPRTIYGVSKVH  190 (366)
T ss_pred             eeeeHHHHHHH-hcccCCceeeeecchhhhHHHHHHHHcCe-eEeecccccccCCCCCCCCCCCeeeecCceeechhHHH
Confidence            99999886432 12233444567899999999999998876 56668999999854 34555666667789999999999


Q ss_pred             HHHHHHHHhhcCCCcEEEEe
Q 025786          227 AEDIILDFSKNSDMAVLQCH  246 (248)
Q Consensus       227 ~e~l~~~~~~~~gi~~~~v~  246 (248)
                      +|.+.+.+..++|+.+-++|
T Consensus       191 AEL~GEy~~hrFg~dfr~~r  210 (366)
T KOG2774|consen  191 AELLGEYFNHRFGVDFRSMR  210 (366)
T ss_pred             HHHHHHHHHhhcCccceecc
Confidence            99999999999998876664

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=99.42  E-value=6.7e-12  Score=102.92  Aligned_cols=142  Identities=20%  Similarity=0.238  Sum_probs=97.5

Q ss_pred             EEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEEEc
Q 025786           73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVMHF  152 (248)
Q Consensus        73 vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li~~  152 (248)
                      |+||||||.+|+.+++.|++.+++|.++.|...+  ...+.++.     ..++++.+|+.|.+++.++++  ++|.||.+
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~--~~~~~l~~-----~g~~vv~~d~~~~~~l~~al~--g~d~v~~~   71 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSS--DRAQQLQA-----LGAEVVEADYDDPESLVAALK--GVDAVFSV   71 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHH--HHHHHHHH-----TTTEEEES-TT-HHHHHHHHT--TCSEEEEE
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEeccch--hhhhhhhc-----ccceEeecccCCHHHHHHHHc--CCceEEee
Confidence            7999999999999999999999999999875421  12222222     145778999999999999998  78999987


Q ss_pred             ccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHH
Q 025786          153 AAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIIL  232 (248)
Q Consensus       153 Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e~l~~  232 (248)
                      -+...            ..-.....++++++++.+.++||+.|....+.        +.....|..+.-..|...|++++
T Consensus        72 ~~~~~------------~~~~~~~~~li~Aa~~agVk~~v~ss~~~~~~--------~~~~~~p~~~~~~~k~~ie~~l~  131 (233)
T PF05368_consen   72 TPPSH------------PSELEQQKNLIDAAKAAGVKHFVPSSFGADYD--------ESSGSEPEIPHFDQKAEIEEYLR  131 (233)
T ss_dssp             SSCSC------------CCHHHHHHHHHHHHHHHT-SEEEESEESSGTT--------TTTTSTTHHHHHHHHHHHHHHHH
T ss_pred             cCcch------------hhhhhhhhhHHHhhhccccceEEEEEeccccc--------ccccccccchhhhhhhhhhhhhh
Confidence            66432            11123456688999999999999654433321        11112223344467888887776


Q ss_pred             HHhhcCCCcEEEEec
Q 025786          233 DFSKNSDMAVLQCHR  247 (248)
Q Consensus       233 ~~~~~~gi~~~~v~P  247 (248)
                      +    .+++.++++|
T Consensus       132 ~----~~i~~t~i~~  142 (233)
T PF05368_consen  132 E----SGIPYTIIRP  142 (233)
T ss_dssp             H----CTSEBEEEEE
T ss_pred             h----ccccceeccc
Confidence            5    4999999987

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=99.40  E-value=5.1e-12  Score=103.26  Aligned_cols=150  Identities=15%  Similarity=0.151  Sum_probs=113.1

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li  150 (248)
                      -++-|.|||||+|+.++.+|++.|-+|++-.|-....   ...++-+ .+-+.+.+...|+.|+++++++++  .-.+||
T Consensus        62 iVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~---~r~lkvm-GdLGQvl~~~fd~~DedSIr~vvk--~sNVVI  135 (391)
T KOG2865|consen   62 IVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYD---PRHLKVM-GDLGQVLFMKFDLRDEDSIRAVVK--HSNVVI  135 (391)
T ss_pred             eEEEEecccccccHHHHHHHhhcCCeEEEeccCCccc---hhheeec-ccccceeeeccCCCCHHHHHHHHH--hCcEEE
Confidence            5788899999999999999999999999988643222   1222222 234578999999999999999998  458999


Q ss_pred             EcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCCChHHHHHHHHHHH
Q 025786          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDI  230 (248)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e~l  230 (248)
                      |+-|-    ..+...-.+.+.|..+...+...|++.+..++|++|+..+-             ...-+-|=.||++.|..
T Consensus       136 NLIGr----d~eTknf~f~Dvn~~~aerlAricke~GVerfIhvS~Lgan-------------v~s~Sr~LrsK~~gE~a  198 (391)
T KOG2865|consen  136 NLIGR----DYETKNFSFEDVNVHIAERLARICKEAGVERFIHVSCLGAN-------------VKSPSRMLRSKAAGEEA  198 (391)
T ss_pred             Eeecc----ccccCCcccccccchHHHHHHHHHHhhChhheeehhhcccc-------------ccChHHHHHhhhhhHHH
Confidence            99884    23334445667788889999999999999999999985532             22234578889988888


Q ss_pred             HHHHhhcCCCcEEEEec
Q 025786          231 ILDFSKNSDMAVLQCHR  247 (248)
Q Consensus       231 ~~~~~~~~gi~~~~v~P  247 (248)
                      ++..-.    ..+|+||
T Consensus       199 VrdafP----eAtIirP  211 (391)
T KOG2865|consen  199 VRDAFP----EATIIRP  211 (391)
T ss_pred             HHhhCC----cceeech
Confidence            776443    3467776

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=99.40  E-value=2.8e-11  Score=96.16  Aligned_cols=159  Identities=16%  Similarity=0.105  Sum_probs=107.8

Q ss_pred             ceEEEEecCC--chhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc----
Q 025786           70 VTHVLVTGGA--GYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----  143 (248)
Q Consensus        70 ~k~vlITGas--g~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~----  143 (248)
                      +|++||+|-.  ..|+..|+++|.++|+++..+...    +++.+.++++.+..+...+++||+++.+++..++++    
T Consensus         6 GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~----e~l~krv~~la~~~~s~~v~~cDV~~d~~i~~~f~~i~~~   81 (259)
T COG0623           6 GKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQG----ERLEKRVEELAEELGSDLVLPCDVTNDESIDALFATIKKK   81 (259)
T ss_pred             CceEEEEEecccccHHHHHHHHHHHcCCEEEEEecc----HHHHHHHHHHHhhccCCeEEecCCCCHHHHHHHHHHHHHh
Confidence            3999999954  699999999999999999998743    244555555544334456799999999999999876    


Q ss_pred             -CCCCEEEEcccccccC----CCCCCchhhHhhhHHH-H-------HHHHHHHHHcCCCEEEEeccceecCCCCCCCCCC
Q 025786          144 -NAFDAVMHFAAVAYVG----ESTLDPLKYYHNITSN-T-------LVVLESMARHGVDTLIYSSTCATYGEPEKMPITE  210 (248)
Q Consensus       144 -~~iD~li~~Ag~~~~~----~~~~~~~~~~~~~~~~-~-------~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e  210 (248)
                       +++|.|||+-|.....    ...+.+.+-|..-+.. +       +.+.+.|.  +.+.+|.+|=.+.           
T Consensus        82 ~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~--~ggSiltLtYlgs-----------  148 (259)
T COG0623          82 WGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMN--NGGSILTLTYLGS-----------  148 (259)
T ss_pred             hCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcC--CCCcEEEEEeccc-----------
Confidence             7899999999976422    2223333333322222 2       22333332  2456765542111           


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHhhcC---CCcEEEE
Q 025786          211 ETPQAPINPYGKAKKMAEDIILDFSKNS---DMAVLQC  245 (248)
Q Consensus       211 ~~~~~~~~~Y~~sK~a~e~l~~~~~~~~---gi~~~~v  245 (248)
                      ....+.++.-+.+|++.|.-++.++.+.   ||+|+.+
T Consensus       149 ~r~vPnYNvMGvAKAaLEasvRyLA~dlG~~gIRVNaI  186 (259)
T COG0623         149 ERVVPNYNVMGVAKAALEASVRYLAADLGKEGIRVNAI  186 (259)
T ss_pred             eeecCCCchhHHHHHHHHHHHHHHHHHhCccCeEEeee
Confidence            1234557789999999999999999885   5776654

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=99.37  E-value=1.6e-11  Score=108.10  Aligned_cols=170  Identities=20%  Similarity=0.213  Sum_probs=112.8

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCC---EEEEEecCCCCcchhhhhhhhh------------cC-CCCceEEEEccCCC
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSY---RVTIVDNLSRGNIGAVKVLQEL------------FP-EPGRLQFIYADLGD  133 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~---~V~~~~r~~~~~~~~~~~~~~~------------~~-~~~~~~~~~~Dl~~  133 (248)
                      .|+|+|||||||+|.-++++|+..--   +++++-|.....+ ..+.++..            .+ .-.++..+.+|+++
T Consensus        12 ~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~-~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~~   90 (467)
T KOG1221|consen   12 NKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKA-AQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDISE   90 (467)
T ss_pred             CCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCC-HHHHHHHHHhhhHHHHHHhhCccceecceeccccccC
Confidence            39999999999999999999987642   6677766544332 22222111            11 12467788899875


Q ss_pred             H------HHHHHHhhcCCCCEEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcC-CCEEEEeccceecCCC---
Q 025786          134 A------KAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHG-VDTLIYSSTCATYGEP---  203 (248)
Q Consensus       134 ~------~~~~~~~~~~~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~-~~~iV~~SS~~~~g~~---  203 (248)
                      +      .++..+.+  .+|+|||+|+....   ++........|..++.++++.+++.. ...+|++|++...-..   
T Consensus        91 ~~LGis~~D~~~l~~--eV~ivih~AAtvrF---de~l~~al~iNt~Gt~~~l~lak~~~~l~~~vhVSTAy~n~~~~~i  165 (467)
T KOG1221|consen   91 PDLGISESDLRTLAD--EVNIVIHSAATVRF---DEPLDVALGINTRGTRNVLQLAKEMVKLKALVHVSTAYSNCNVGHI  165 (467)
T ss_pred             cccCCChHHHHHHHh--cCCEEEEeeeeecc---chhhhhhhhhhhHhHHHHHHHHHHhhhhheEEEeehhheecccccc
Confidence            4      34553444  79999999997643   23334456678889999999998753 5789999997654111   


Q ss_pred             CCCCCC--C------------CC------------CCCCCChHHHHHHHHHHHHHHHhhcCCCcEEEEec
Q 025786          204 EKMPIT--E------------ET------------PQAPINPYGKAKKMAEDIILDFSKNSDMAVLQCHR  247 (248)
Q Consensus       204 ~~~~~~--e------------~~------------~~~~~~~Y~~sK~a~e~l~~~~~~~~gi~~~~v~P  247 (248)
                      ...++.  +            +.            -....+.|.-+|+.+|+++...+  .+++++|+||
T Consensus       166 ~E~~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~~--~~lPivIiRP  233 (467)
T KOG1221|consen  166 EEKPYPMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKEA--ENLPLVIIRP  233 (467)
T ss_pred             cccccCccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhhc--cCCCeEEEcC
Confidence            111111  1            00            01124569999999999998865  4689999998

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=99.27  E-value=2.3e-10  Score=87.99  Aligned_cols=154  Identities=16%  Similarity=0.131  Sum_probs=108.0

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li  150 (248)
                      |+|.|.||||-+|++++++..++||+|+++.|++.+...           -..+.+++.|+.|++++.+.+.  +.|+||
T Consensus         1 mKIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~-----------~~~~~i~q~Difd~~~~a~~l~--g~DaVI   67 (211)
T COG2910           1 MKIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAA-----------RQGVTILQKDIFDLTSLASDLA--GHDAVI   67 (211)
T ss_pred             CeEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhccc-----------cccceeecccccChhhhHhhhc--CCceEE
Confidence            578899999999999999999999999999976543211           1357789999999999988887  689999


Q ss_pred             EcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCCChHHHHHHHHHHH
Q 025786          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDI  230 (248)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e~l  230 (248)
                      ..-+...+.     .+.   ........++..++..+..|++.++-.+..--..+ ..-.+.|..|...|..++..+|. 
T Consensus        68 sA~~~~~~~-----~~~---~~~k~~~~li~~l~~agv~RllVVGGAGSL~id~g-~rLvD~p~fP~ey~~~A~~~ae~-  137 (211)
T COG2910          68 SAFGAGASD-----NDE---LHSKSIEALIEALKGAGVPRLLVVGGAGSLEIDEG-TRLVDTPDFPAEYKPEALAQAEF-  137 (211)
T ss_pred             EeccCCCCC-----hhH---HHHHHHHHHHHHHhhcCCeeEEEEcCccceEEcCC-ceeecCCCCchhHHHHHHHHHHH-
Confidence            865543211     111   11122455777777778889998876554321111 11223566666678888887775 


Q ss_pred             HHHHhhcCCCcEEEEec
Q 025786          231 ILDFSKNSDMAVLQCHR  247 (248)
Q Consensus       231 ~~~~~~~~gi~~~~v~P  247 (248)
                      +..+..+.++.++.+.|
T Consensus       138 L~~Lr~~~~l~WTfvSP  154 (211)
T COG2910         138 LDSLRAEKSLDWTFVSP  154 (211)
T ss_pred             HHHHhhccCcceEEeCc
Confidence            56677777799999988

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.24  E-value=3.5e-10  Score=94.52  Aligned_cols=141  Identities=20%  Similarity=0.262  Sum_probs=98.2

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li  150 (248)
                      ++|+||||||++|++++++|+++|++|.+..|+......       ..   ..+.+...|+.+.+++...++  ++|.++
T Consensus         1 ~~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~-------~~---~~v~~~~~d~~~~~~l~~a~~--G~~~~~   68 (275)
T COG0702           1 MKILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAA-------LA---GGVEVVLGDLRDPKSLVAGAK--GVDGVL   68 (275)
T ss_pred             CeEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHh-------hc---CCcEEEEeccCCHhHHHHHhc--cccEEE
Confidence            479999999999999999999999999999875433221       11   468889999999999999887  789999


Q ss_pred             EcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCCChHHHHHHHHHHH
Q 025786          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDI  230 (248)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e~l  230 (248)
                      +..+... ...     ...........+..+... .+..+++.+|+.....             .....|..+|...|..
T Consensus        69 ~i~~~~~-~~~-----~~~~~~~~~~~~~a~~a~-~~~~~~~~~s~~~~~~-------------~~~~~~~~~~~~~e~~  128 (275)
T COG0702          69 LISGLLD-GSD-----AFRAVQVTAVVRAAEAAG-AGVKHGVSLSVLGADA-------------ASPSALARAKAAVEAA  128 (275)
T ss_pred             EEecccc-ccc-----chhHHHHHHHHHHHHHhc-CCceEEEEeccCCCCC-------------CCccHHHHHHHHHHHH
Confidence            8887543 211     111122222223333332 3356788887755421             2256799999999998


Q ss_pred             HHHHhhcCCCcEEEEec
Q 025786          231 ILDFSKNSDMAVLQCHR  247 (248)
Q Consensus       231 ~~~~~~~~gi~~~~v~P  247 (248)
                      +.+    .|++.++++|
T Consensus       129 l~~----sg~~~t~lr~  141 (275)
T COG0702         129 LRS----SGIPYTTLRR  141 (275)
T ss_pred             HHh----cCCCeEEEec
Confidence            876    5777777764

>PRK08309 short chain dehydrogenase; Provisional

Probab=99.12  E-value=9.9e-10  Score=86.26  Aligned_cols=105  Identities=19%  Similarity=0.247  Sum_probs=74.9

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      |+++||||||++| .+++.|+++|++|++++|+..   ...+....+. ....+.++.+|++|++++.++++.     ++
T Consensus         1 m~vlVtGGtG~gg-~la~~L~~~G~~V~v~~R~~~---~~~~l~~~l~-~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~   75 (177)
T PRK08309          1 MHALVIGGTGMLK-RVSLWLCEKGFHVSVIARREV---KLENVKREST-TPESITPLPLDYHDDDALKLAIKSTIEKNGP   75 (177)
T ss_pred             CEEEEECcCHHHH-HHHHHHHHCcCEEEEEECCHH---HHHHHHHHhh-cCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            4799999996555 599999999999999886432   2222222222 234688899999999999888865     57


Q ss_pred             CCEEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCC----EEEEe-ccce
Q 025786          146 FDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD----TLIYS-STCA  198 (248)
Q Consensus       146 iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~----~iV~~-SS~~  198 (248)
                      +|++|+..-.                  .+..++..++++.+.+    +++++ +|.+
T Consensus        76 id~lv~~vh~------------------~~~~~~~~~~~~~gv~~~~~~~~h~~gs~~  115 (177)
T PRK08309         76 FDLAVAWIHS------------------SAKDALSVVCRELDGSSETYRLFHVLGSAA  115 (177)
T ss_pred             CeEEEEeccc------------------cchhhHHHHHHHHccCCCCceEEEEeCCcC
Confidence            8888876432                  1355677788887766    78885 5544

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=99.09  E-value=3.8e-09  Score=91.89  Aligned_cols=157  Identities=22%  Similarity=0.157  Sum_probs=97.7

Q ss_pred             CceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHH-HHHHHhhcC--C
Q 025786           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAK-AVNKFFSEN--A  145 (248)
Q Consensus        69 ~~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~--~  145 (248)
                      .+++|+|+||||.+|+-+++.|.++|+.|.++.|.....+.   ... ..........+..|..... ....+.+..  .
T Consensus        78 ~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~---~~~-~~~~d~~~~~v~~~~~~~~d~~~~~~~~~~~~  153 (411)
T KOG1203|consen   78 KPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAED---LLG-VFFVDLGLQNVEADVVTAIDILKKLVEAVPKG  153 (411)
T ss_pred             CCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhh---hhc-ccccccccceeeeccccccchhhhhhhhcccc
Confidence            34799999999999999999999999999998764433322   222 1111223344444444333 333444332  2


Q ss_pred             CCEEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCCC------h
Q 025786          146 FDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPIN------P  219 (248)
Q Consensus       146 iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~------~  219 (248)
                      ..+++-++|-.+...   +-..-+..-..++.+++++|+..+.+++|++||+..--           ...+..      .
T Consensus       154 ~~~v~~~~ggrp~~e---d~~~p~~VD~~g~knlvdA~~~aGvk~~vlv~si~~~~-----------~~~~~~~~~~~~~  219 (411)
T KOG1203|consen  154 VVIVIKGAGGRPEEE---DIVTPEKVDYEGTKNLVDACKKAGVKRVVLVGSIGGTK-----------FNQPPNILLLNGL  219 (411)
T ss_pred             ceeEEecccCCCCcc---cCCCcceecHHHHHHHHHHHHHhCCceEEEEEeecCcc-----------cCCCchhhhhhhh
Confidence            456666665332211   11122344567899999999999999999998865531           111122      2


Q ss_pred             HHHHHHHHHHHHHHHhhcCCCcEEEEec
Q 025786          220 YGKAKKMAEDIILDFSKNSDMAVLQCHR  247 (248)
Q Consensus       220 Y~~sK~a~e~l~~~~~~~~gi~~~~v~P  247 (248)
                      +-.+|..+|.+.+    +.|++.++|||
T Consensus       220 ~~~~k~~~e~~~~----~Sgl~ytiIR~  243 (411)
T KOG1203|consen  220 VLKAKLKAEKFLQ----DSGLPYTIIRP  243 (411)
T ss_pred             hhHHHHhHHHHHH----hcCCCcEEEec
Confidence            3366666666654    58999999997

>PTZ00325 malate dehydrogenase; Provisional

Probab=99.05  E-value=2e-09  Score=92.05  Aligned_cols=168  Identities=13%  Similarity=0.105  Sum_probs=109.4

Q ss_pred             CCceEEEEecCCchhHHHHHHHHHHCC--CEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCC
Q 025786           68 EGVTHVLVTGGAGYIGSHAALRLLKDS--YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENA  145 (248)
Q Consensus        68 ~~~k~vlITGasg~IG~~la~~L~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~  145 (248)
                      ..|++|.|||++|.||..++..|+.++  .+++++|+.....+ ..+ +...   ...  ....+.+|.+++.+.++  +
T Consensus         6 ~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~~~g~-a~D-l~~~---~~~--~~v~~~td~~~~~~~l~--g   76 (321)
T PTZ00325          6 LKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVGAPGV-AAD-LSHI---DTP--AKVTGYADGELWEKALR--G   76 (321)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCCCccc-ccc-hhhc---CcC--ceEEEecCCCchHHHhC--C
Confidence            346899999999999999999998665  58999987211111 111 1111   112  23345555444444554  6


Q ss_pred             CCEEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCCC--CCCCCCCCCCCCChHHHH
Q 025786          146 FDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEK--MPITEETPQAPINPYGKA  223 (248)
Q Consensus       146 iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~--~~~~e~~~~~~~~~Y~~s  223 (248)
                      .|+||++||....  ...+..+.+..|...+..+++.|++.+..++|+++|..+-....-  ..+.+...+++...||.+
T Consensus        77 aDvVVitaG~~~~--~~~tR~dll~~N~~i~~~i~~~i~~~~~~~iviv~SNPvdv~~~~~~~~~~~~sg~p~~~viG~g  154 (321)
T PTZ00325         77 ADLVLICAGVPRK--PGMTRDDLFNTNAPIVRDLVAAVASSAPKAIVGIVSNPVNSTVPIAAETLKKAGVYDPRKLFGVT  154 (321)
T ss_pred             CCEEEECCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHHHHHHHHHhhhhhccCCChhheeech
Confidence            8999999997432  223456778888899999999999999999999998543211100  011234566777788887


Q ss_pred             HHHHHHHHHHHhhcCCCcEEEEe
Q 025786          224 KKMAEDIILDFSKNSDMAVLQCH  246 (248)
Q Consensus       224 K~a~e~l~~~~~~~~gi~~~~v~  246 (248)
                      =.-.-.+-..+++.+++...-|+
T Consensus       155 ~LDs~R~r~~la~~l~v~~~~V~  177 (321)
T PTZ00325        155 TLDVVRARKFVAEALGMNPYDVN  177 (321)
T ss_pred             hHHHHHHHHHHHHHhCcChhheE
Confidence            44445677777787776655444

>PLN00106 malate dehydrogenase

Probab=99.05  E-value=2.3e-09  Score=91.68  Aligned_cols=165  Identities=12%  Similarity=0.093  Sum_probs=111.2

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC--EEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~  148 (248)
                      ++|.|||++|.||..++..|+.++.  +++++|......+ .. .+.+.   ....  ...++++.+++.+.++  +.|+
T Consensus        19 ~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~~~g~-a~-Dl~~~---~~~~--~i~~~~~~~d~~~~l~--~aDi   89 (323)
T PLN00106         19 FKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIANTPGV-AA-DVSHI---NTPA--QVRGFLGDDQLGDALK--GADL   89 (323)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCCCCee-Ec-hhhhC---CcCc--eEEEEeCCCCHHHHcC--CCCE
Confidence            6899999999999999999997764  8999987541111 11 11111   1111  2234444445566665  6899


Q ss_pred             EEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCC--CCCCCCCCCCCCCCChHHHHHHH
Q 025786          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEP--EKMPITEETPQAPINPYGKAKKM  226 (248)
Q Consensus       149 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~--~~~~~~e~~~~~~~~~Y~~sK~a  226 (248)
                      ||+.||....  ...+..+.+..|......+.+.+.+.++..+|+++|.-+-+..  ....+.....++|...||.++.-
T Consensus        90 VVitAG~~~~--~g~~R~dll~~N~~i~~~i~~~i~~~~p~aivivvSNPvD~~~~i~t~~~~~~s~~p~~~viG~~~LD  167 (323)
T PLN00106         90 VIIPAGVPRK--PGMTRDDLFNINAGIVKTLCEAVAKHCPNALVNIISNPVNSTVPIAAEVLKKAGVYDPKKLFGVTTLD  167 (323)
T ss_pred             EEEeCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCCCCcceEEEEecch
Confidence            9999997533  2345567788899999999999999988888888873221000  00001233456778899999988


Q ss_pred             HHHHHHHHhhcCCCcEEEEe
Q 025786          227 AEDIILDFSKNSDMAVLQCH  246 (248)
Q Consensus       227 ~e~l~~~~~~~~gi~~~~v~  246 (248)
                      .+.+-..+++++|+....|+
T Consensus       168 s~Rl~~~lA~~lgv~~~~V~  187 (323)
T PLN00106        168 VVRANTFVAEKKGLDPADVD  187 (323)
T ss_pred             HHHHHHHHHHHhCCChhheE
Confidence            88999999999887655443

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=98.90  E-value=4.2e-09  Score=86.00  Aligned_cols=85  Identities=19%  Similarity=0.276  Sum_probs=58.1

Q ss_pred             eEEEEec-CCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 025786           71 THVLVTG-GAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (248)
Q Consensus        71 k~vlITG-asg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~  144 (248)
                      .+=.||. +|||||+++|+.|+++|++|+++++..    .    ..   ...    ...+|+.+.+++.+++++     +
T Consensus        15 ~VR~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~~----~----l~---~~~----~~~~Dv~d~~s~~~l~~~v~~~~g   79 (227)
T TIGR02114        15 SVRSITNHSTGHLGKIITETFLSAGHEVTLVTTKR----A----LK---PEP----HPNLSIREIETTKDLLITLKELVQ   79 (227)
T ss_pred             CceeecCCcccHHHHHHHHHHHHCCCEEEEEcChh----h----cc---ccc----CCcceeecHHHHHHHHHHHHHHcC
Confidence            4556665 478999999999999999999986411    0    00   000    135799998888877654     5


Q ss_pred             CCCEEEEcccccccCCCCCCchhhHh
Q 025786          145 AFDAVMHFAAVAYVGESTLDPLKYYH  170 (248)
Q Consensus       145 ~iD~li~~Ag~~~~~~~~~~~~~~~~  170 (248)
                      ++|+||||||+....+....+.+.|+
T Consensus        80 ~iDiLVnnAgv~d~~~~~~~s~e~~~  105 (227)
T TIGR02114        80 EHDILIHSMAVSDYTPVYMTDLEQVQ  105 (227)
T ss_pred             CCCEEEECCEeccccchhhCCHHHHh
Confidence            79999999998654443333333443

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=98.78  E-value=8.9e-08  Score=73.43  Aligned_cols=147  Identities=11%  Similarity=0.064  Sum_probs=101.0

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCC--EEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCC
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFD  147 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD  147 (248)
                      ++.++|.||||-.|+.+.+++++++-  +|+++.|......+          ....+.....|....++....+.  ++|
T Consensus        18 ~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~a----------t~k~v~q~~vDf~Kl~~~a~~~q--g~d   85 (238)
T KOG4039|consen   18 NMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDPA----------TDKVVAQVEVDFSKLSQLATNEQ--GPD   85 (238)
T ss_pred             ccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCcc----------ccceeeeEEechHHHHHHHhhhc--CCc
Confidence            48899999999999999999999984  89988864221111          12245556677766666555444  789


Q ss_pred             EEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCCChHHHHHHHH
Q 025786          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMA  227 (248)
Q Consensus       148 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~  227 (248)
                      +++.+-|......   ..+.++....+-.+.+.+++++.+++.||.+||.++-..             ..-.|-..|..+
T Consensus        86 V~FcaLgTTRgka---GadgfykvDhDyvl~~A~~AKe~Gck~fvLvSS~GAd~s-------------SrFlY~k~KGEv  149 (238)
T KOG4039|consen   86 VLFCALGTTRGKA---GADGFYKVDHDYVLQLAQAAKEKGCKTFVLVSSAGADPS-------------SRFLYMKMKGEV  149 (238)
T ss_pred             eEEEeeccccccc---ccCceEeechHHHHHHHHHHHhCCCeEEEEEeccCCCcc-------------cceeeeeccchh
Confidence            9998888653322   233445555556778888999999999999999766321             133588888888


Q ss_pred             HHHHHHHhhcCCCcEEEEec
Q 025786          228 EDIILDFSKNSDMAVLQCHR  247 (248)
Q Consensus       228 e~l~~~~~~~~gi~~~~v~P  247 (248)
                      |.=+.++--   -.++|+||
T Consensus       150 E~~v~eL~F---~~~~i~RP  166 (238)
T KOG4039|consen  150 ERDVIELDF---KHIIILRP  166 (238)
T ss_pred             hhhhhhccc---cEEEEecC
Confidence            876655432   24566666

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=98.78  E-value=3.7e-08  Score=86.72  Aligned_cols=74  Identities=24%  Similarity=0.225  Sum_probs=58.3

Q ss_pred             eEEEEecC----------------CchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCH
Q 025786           71 THVLVTGG----------------AGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDA  134 (248)
Q Consensus        71 k~vlITGa----------------sg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~  134 (248)
                      |+|+||||                ||.+|.+++++|+++|++|+++++...    . +    .   +..  +..+|+++.
T Consensus       189 k~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~----~-~----~---~~~--~~~~dv~~~  254 (399)
T PRK05579        189 KRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVN----L-P----T---PAG--VKRIDVESA  254 (399)
T ss_pred             CEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcc----c-c----C---CCC--cEEEccCCH
Confidence            89999999                777999999999999999999875321    0 0    0   111  346799999


Q ss_pred             HHHHHHhhc--CCCCEEEEccccccc
Q 025786          135 KAVNKFFSE--NAFDAVMHFAAVAYV  158 (248)
Q Consensus       135 ~~~~~~~~~--~~iD~li~~Ag~~~~  158 (248)
                      +++.+.+.+  +++|++|||||+...
T Consensus       255 ~~~~~~v~~~~~~~DilI~~Aav~d~  280 (399)
T PRK05579        255 QEMLDAVLAALPQADIFIMAAAVADY  280 (399)
T ss_pred             HHHHHHHHHhcCCCCEEEEccccccc
Confidence            998888865  679999999998643

>PRK09620 hypothetical protein; Provisional

Probab=98.77  E-value=3.4e-08  Score=80.67  Aligned_cols=81  Identities=20%  Similarity=0.202  Sum_probs=55.0

Q ss_pred             eEEEEecCC----------------chhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCH
Q 025786           71 THVLVTGGA----------------GYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDA  134 (248)
Q Consensus        71 k~vlITGas----------------g~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~  134 (248)
                      |+||||+|.                |++|+++|++|+++|++|+++++.......      .. +.......+..|....
T Consensus         4 k~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~------~~-~~~~~~~~V~s~~d~~   76 (229)
T PRK09620          4 KKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPN------DI-NNQLELHPFEGIIDLQ   76 (229)
T ss_pred             CEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCc------cc-CCceeEEEEecHHHHH
Confidence            899999885                999999999999999999998753221100      00 0011233445533334


Q ss_pred             HHHHHHhhcCCCCEEEEccccccc
Q 025786          135 KAVNKFFSENAFDAVMHFAAVAYV  158 (248)
Q Consensus       135 ~~~~~~~~~~~iD~li~~Ag~~~~  158 (248)
                      +.+.+++.+.++|+|||+|++...
T Consensus        77 ~~l~~~~~~~~~D~VIH~AAvsD~  100 (229)
T PRK09620         77 DKMKSIITHEKVDAVIMAAAGSDW  100 (229)
T ss_pred             HHHHHHhcccCCCEEEECccccce
Confidence            567777765578999999998543

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=98.72  E-value=7.1e-08  Score=83.86  Aligned_cols=77  Identities=26%  Similarity=0.369  Sum_probs=62.3

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCC-CEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDS-YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~  148 (248)
                      |++|+|.|+ |+||+.++..|+++| .+|++.+|+..+..+..   ..   ...+++.+++|+.|.+++.+++++  .|+
T Consensus         1 m~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~---~~---~~~~v~~~~vD~~d~~al~~li~~--~d~   71 (389)
T COG1748           1 MMKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIA---EL---IGGKVEALQVDAADVDALVALIKD--FDL   71 (389)
T ss_pred             CCcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHH---hh---ccccceeEEecccChHHHHHHHhc--CCE
Confidence            588999998 999999999999999 89999997544332221   11   134789999999999999999985  499


Q ss_pred             EEEcccc
Q 025786          149 VMHFAAV  155 (248)
Q Consensus       149 li~~Ag~  155 (248)
                      |||++..
T Consensus        72 VIn~~p~   78 (389)
T COG1748          72 VINAAPP   78 (389)
T ss_pred             EEEeCCc
Confidence            9999864

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=98.72  E-value=5.9e-08  Score=79.40  Aligned_cols=75  Identities=20%  Similarity=0.200  Sum_probs=48.3

Q ss_pred             eEEEEec-CCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCC--HHHHHHHhhcCCCC
Q 025786           71 THVLVTG-GAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD--AKAVNKFFSENAFD  147 (248)
Q Consensus        71 k~vlITG-asg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~iD  147 (248)
                      .+-.||. +||+||++++++|+++|++|+++++.....        ..  ...++.++.++-.+  .+.+.+.+.  ++|
T Consensus        16 ~VR~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~--------~~--~~~~v~~i~v~s~~~m~~~l~~~~~--~~D   83 (229)
T PRK06732         16 SVRGITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAVK--------PE--PHPNLSIIEIENVDDLLETLEPLVK--DHD   83 (229)
T ss_pred             CceeecCccchHHHHHHHHHHHhCCCEEEEEECccccc--------CC--CCCCeEEEEEecHHHHHHHHHHHhc--CCC
Confidence            4556775 567899999999999999999987532110        00  01245555543221  133444443  689


Q ss_pred             EEEEcccccc
Q 025786          148 AVMHFAAVAY  157 (248)
Q Consensus       148 ~li~~Ag~~~  157 (248)
                      +||||||+..
T Consensus        84 ivIh~AAvsd   93 (229)
T PRK06732         84 VLIHSMAVSD   93 (229)
T ss_pred             EEEeCCccCC
Confidence            9999999864

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=98.66  E-value=1.3e-07  Score=80.03  Aligned_cols=83  Identities=16%  Similarity=0.129  Sum_probs=59.8

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCE-EEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYR-VTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~l  149 (248)
                      ++++|||| ||+|++++..|++.|++ |++++|+....+++.+..+++......+.+..+|+.+.+++.+.++  ..|+|
T Consensus       127 k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~--~~Dil  203 (289)
T PRK12548        127 KKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIA--SSDIL  203 (289)
T ss_pred             CEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhc--cCCEE
Confidence            89999998 79999999999999996 9999875421123333333332222345566789988888877766  57999


Q ss_pred             EEccccc
Q 025786          150 MHFAAVA  156 (248)
Q Consensus       150 i~~Ag~~  156 (248)
                      |||-.+.
T Consensus       204 INaTp~G  210 (289)
T PRK12548        204 VNATLVG  210 (289)
T ss_pred             EEeCCCC
Confidence            9987654

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=98.63  E-value=3.5e-07  Score=78.64  Aligned_cols=118  Identities=14%  Similarity=0.075  Sum_probs=74.8

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCC-------CEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDS-------YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE  143 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~  143 (248)
                      .+|+||||+|+||.+++..|+..+       .+|+++|+... .+.+.....++..   -......|+....++.+.++ 
T Consensus         3 ~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~-~~~~~g~~~Dl~d---~~~~~~~~~~~~~~~~~~l~-   77 (325)
T cd01336           3 IRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPA-LKALEGVVMELQD---CAFPLLKSVVATTDPEEAFK-   77 (325)
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCc-cccccceeeehhh---ccccccCCceecCCHHHHhC-
Confidence            579999999999999999999854       58999997432 1111110001100   00011224444455555555 


Q ss_pred             CCCCEEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcC--CCEEEEecc
Q 025786          144 NAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHG--VDTLIYSST  196 (248)
Q Consensus       144 ~~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~--~~~iV~~SS  196 (248)
                       +.|+|||+||....  ...+..+.+..|......+.+.+.+..  ...+|.+|.
T Consensus        78 -~aDiVI~tAG~~~~--~~~~R~~l~~~N~~i~~~i~~~i~~~~~~~~iiivvsN  129 (325)
T cd01336          78 -DVDVAILVGAMPRK--EGMERKDLLKANVKIFKEQGEALDKYAKKNVKVLVVGN  129 (325)
T ss_pred             -CCCEEEEeCCcCCC--CCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEecC
Confidence             68999999997532  234457788888888888888888873  334555554

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=98.54  E-value=3.9e-07  Score=80.00  Aligned_cols=75  Identities=24%  Similarity=0.251  Sum_probs=55.8

Q ss_pred             eEEEEecC---------------Cch-hHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCH
Q 025786           71 THVLVTGG---------------AGY-IGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDA  134 (248)
Q Consensus        71 k~vlITGa---------------sg~-IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~  134 (248)
                      ++++||||               |+| +|.+++++|..+|++|+++.+.....            .+..+  ..+|+++.
T Consensus       186 ~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~------------~~~~~--~~~~v~~~  251 (390)
T TIGR00521       186 KRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLL------------TPPGV--KSIKVSTA  251 (390)
T ss_pred             ceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccC------------CCCCc--EEEEeccH
Confidence            89999999               445 99999999999999999887422110            01122  46799999


Q ss_pred             HHH-HHHhhc--CCCCEEEEcccccccC
Q 025786          135 KAV-NKFFSE--NAFDAVMHFAAVAYVG  159 (248)
Q Consensus       135 ~~~-~~~~~~--~~iD~li~~Ag~~~~~  159 (248)
                      +++ +.++++  +++|++|||||+....
T Consensus       252 ~~~~~~~~~~~~~~~D~~i~~Aavsd~~  279 (390)
T TIGR00521       252 EEMLEAALNELAKDFDIFISAAAVADFK  279 (390)
T ss_pred             HHHHHHHHHhhcccCCEEEEcccccccc
Confidence            888 555533  5789999999986543

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=98.52  E-value=5.2e-07  Score=71.96  Aligned_cols=79  Identities=24%  Similarity=0.215  Sum_probs=58.1

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li  150 (248)
                      ++++|+||+|++|+.+++.|+++|++|++++|+..+   ..+..+.+.. ........+|..+.+++.+.++  +.|+||
T Consensus        29 ~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~---~~~l~~~l~~-~~~~~~~~~~~~~~~~~~~~~~--~~diVi  102 (194)
T cd01078          29 KTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLER---AQKAADSLRA-RFGEGVGAVETSDDAARAAAIK--GADVVF  102 (194)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHH---HHHHHHHHHh-hcCCcEEEeeCCCHHHHHHHHh--cCCEEE
Confidence            899999999999999999999999999998865332   2222222211 1123455678889988888886  579999


Q ss_pred             Ecccc
Q 025786          151 HFAAV  155 (248)
Q Consensus       151 ~~Ag~  155 (248)
                      ++...
T Consensus       103 ~at~~  107 (194)
T cd01078         103 AAGAA  107 (194)
T ss_pred             ECCCC
Confidence            87653

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>COG4982 3-oxoacyl-[acyl-carrier protein]

Probab=98.41  E-value=1.5e-05  Score=72.12  Aligned_cols=154  Identities=18%  Similarity=0.190  Sum_probs=99.7

Q ss_pred             eEEEEecCC-chhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhc----CCCCceEEEEccCCCHHHHHHHhhc--
Q 025786           71 THVLVTGGA-GYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELF----PEPGRLQFIYADLGDAKAVNKFFSE--  143 (248)
Q Consensus        71 k~vlITGas-g~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~~~~Dl~~~~~~~~~~~~--  143 (248)
                      +.++||||+ |-||.+++..|++.|++|+++..+  -.++..+..+.+.    ..+..+-++..+..++.+++.+++-  
T Consensus       397 ~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~--~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDVdAlIewIg  474 (866)
T COG4982         397 KVALVTGASKGSIAAAVVARLLAGGATVIATTSR--LSEERTEFYRSLYARHARYGAALWVVPANMGSYSDVDALIEWIG  474 (866)
T ss_pred             ceEEEecCCCcchHHHHHHHHHhCCcEEEEEccc--ccHHHHHHHHHHHHhhCCCCceEEEEeccccchhhHHHHHHHhc
Confidence            899999988 789999999999999999987521  1222223333332    2234566788999888888777752  


Q ss_pred             -----------------CCCCEEEEcccccccCCCC---CCchhhHhhhHHHHHHHHHHHHHcCC-------CEEEEecc
Q 025786          144 -----------------NAFDAVMHFAAVAYVGEST---LDPLKYYHNITSNTLVVLESMARHGV-------DTLIYSST  196 (248)
Q Consensus       144 -----------------~~iD~li~~Ag~~~~~~~~---~~~~~~~~~~~~~~~~ll~~~~~~~~-------~~iV~~SS  196 (248)
                                       ..+|.+|-.|++...+...   ...+-..+.+..+.+.++-.+++.+.       -++|...|
T Consensus       475 ~eq~~t~g~~s~~~k~a~~ptll~PFAAp~v~G~l~~agsraE~~~rilLw~V~Rliggl~~~~s~r~v~~R~hVVLPgS  554 (866)
T COG4982         475 DEQTETVGPQSIHIKLAWTPTLLFPFAAPRVSGELADAGSRAEFAMRILLWNVLRLIGGLKKQGSSRGVDTRLHVVLPGS  554 (866)
T ss_pred             cccccccCCcceecccccCcceeeecccCCccCccccCCchHHHHHHHHHHHHHHHHHHhhhhccccCcccceEEEecCC
Confidence                             1478999999875443321   22233334445556666666655432       14555555


Q ss_pred             ceecCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHhhcC
Q 025786          197 CATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNS  238 (248)
Q Consensus       197 ~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e~l~~~~~~~~  238 (248)
                      -..            -.......|+.||++.+.++..|..|.
T Consensus       555 PNr------------G~FGgDGaYgEsK~aldav~~RW~sEs  584 (866)
T COG4982         555 PNR------------GMFGGDGAYGESKLALDAVVNRWHSES  584 (866)
T ss_pred             CCC------------CccCCCcchhhHHHHHHHHHHHhhccc
Confidence            211            012235689999999999998887774

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=98.35  E-value=8.5e-06  Score=70.00  Aligned_cols=160  Identities=13%  Similarity=0.087  Sum_probs=102.4

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC-------EEEEEecCCCC--cchhhhhhhhhc-CCCCceEEEEccCCCHHHHHHH
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY-------RVTIVDNLSRG--NIGAVKVLQELF-PEPGRLQFIYADLGDAKAVNKF  140 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~-------~V~~~~r~~~~--~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~  140 (248)
                      ++|.|+|++|.+|..++..|+..|.       +++++|.....  .+.....+.... ....++.+ .  -.++++++  
T Consensus         3 ~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i-~--~~~~~~~~--   77 (322)
T cd01338           3 VRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVI-T--DDPNVAFK--   77 (322)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEE-e--cCcHHHhC--
Confidence            6899999999999999999998875       78888863221  111111111111 11112222 1  12333332  


Q ss_pred             hhcCCCCEEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCC-C-EEEEeccce---ecCCCCCCCCCCCCC-C
Q 025786          141 FSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV-D-TLIYSSTCA---TYGEPEKMPITEETP-Q  214 (248)
Q Consensus       141 ~~~~~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~-~-~iV~~SS~~---~~g~~~~~~~~e~~~-~  214 (248)
                          +.|+||.+||....  ...+..+.+..|......+.+.+.+... . .+|.+|.-.   .|-      .....+ .
T Consensus        78 ----daDivvitaG~~~k--~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~------~~k~sg~~  145 (322)
T cd01338          78 ----DADWALLVGAKPRG--PGMERADLLKANGKIFTAQGKALNDVASRDVKVLVVGNPCNTNALI------AMKNAPDI  145 (322)
T ss_pred             ----CCCEEEEeCCCCCC--CCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecCcHHHHHHH------HHHHcCCC
Confidence                67999999997532  2345667788888888889999988763 4 555555311   110      111232 5


Q ss_pred             CCCChHHHHHHHHHHHHHHHhhcCCCcEEEEec
Q 025786          215 APINPYGKAKKMAEDIILDFSKNSDMAVLQCHR  247 (248)
Q Consensus       215 ~~~~~Y~~sK~a~e~l~~~~~~~~gi~~~~v~P  247 (248)
                      ++...||.++...+++...+++.+|++...++.
T Consensus       146 p~~~ViG~t~LDs~Rl~~~la~~lgv~~~~v~~  178 (322)
T cd01338         146 PPDNFTAMTRLDHNRAKSQLAKKAGVPVTDVKN  178 (322)
T ss_pred             ChHheEEehHHHHHHHHHHHHHHhCcChhHeEE
Confidence            667789999999999999999999987666654

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK05086 malate dehydrogenase; Provisional

Probab=98.33  E-value=9.3e-06  Score=69.53  Aligned_cols=115  Identities=22%  Similarity=0.136  Sum_probs=73.9

Q ss_pred             eEEEEecCCchhHHHHHHHHHH---CCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLK---DSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFD  147 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~---~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD  147 (248)
                      |+|+|.||+|+||++++..|..   .+++++++++... .+.   ..-++.. ......+.+  .+.+++.+.++  +.|
T Consensus         1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~-~~g---~alDl~~-~~~~~~i~~--~~~~d~~~~l~--~~D   71 (312)
T PRK05086          1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPV-TPG---VAVDLSH-IPTAVKIKG--FSGEDPTPALE--GAD   71 (312)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCC-Ccc---eehhhhc-CCCCceEEE--eCCCCHHHHcC--CCC
Confidence            5799999999999999988854   3457888886432 111   0011111 011112222  11223333343  589


Q ss_pred             EEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEecc
Q 025786          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSST  196 (248)
Q Consensus       148 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS  196 (248)
                      +||.++|....  ...+..+.+..|......+++.|.+.+..++|.+.|
T Consensus        72 iVIitaG~~~~--~~~~R~dll~~N~~i~~~ii~~i~~~~~~~ivivvs  118 (312)
T PRK05086         72 VVLISAGVARK--PGMDRSDLFNVNAGIVKNLVEKVAKTCPKACIGIIT  118 (312)
T ss_pred             EEEEcCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence            99999997532  223556778888888999999999998888888777

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=98.31  E-value=3.6e-06  Score=74.29  Aligned_cols=76  Identities=25%  Similarity=0.384  Sum_probs=55.3

Q ss_pred             EEEecCCchhHHHHHHHHHHCCC--EEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 025786           73 VLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (248)
Q Consensus        73 vlITGasg~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li  150 (248)
                      |+|.|+ |++|+.+++.|++++-  +|++.+|+..+   +.+..+++  ...++.++++|+.|.+++.++++  +.|+||
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~---~~~~~~~~--~~~~~~~~~~d~~~~~~l~~~~~--~~dvVi   72 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEK---AERLAEKL--LGDRVEAVQVDVNDPESLAELLR--GCDVVI   72 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHH---HHHHHT----TTTTEEEEE--TTTHHHHHHHHT--TSSEEE
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHH---HHHHHhhc--cccceeEEEEecCCHHHHHHHHh--cCCEEE
Confidence            789999 9999999999999974  89999965433   22332221  34689999999999999999998  469999


Q ss_pred             Eccccc
Q 025786          151 HFAAVA  156 (248)
Q Consensus       151 ~~Ag~~  156 (248)
                      |+++..
T Consensus        73 n~~gp~   78 (386)
T PF03435_consen   73 NCAGPF   78 (386)
T ss_dssp             E-SSGG
T ss_pred             ECCccc
Confidence            999854

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=98.26  E-value=1e-05  Score=67.12  Aligned_cols=75  Identities=15%  Similarity=0.161  Sum_probs=56.7

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li  150 (248)
                      |+|||+||||. |+.+++.|.++|++|++..+.....+...       .  .....+..+..|.+++.+++.+.++|+||
T Consensus         1 m~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~-------~--~g~~~v~~g~l~~~~l~~~l~~~~i~~VI   70 (256)
T TIGR00715         1 MTVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYP-------I--HQALTVHTGALDPQELREFLKRHSIDILV   70 (256)
T ss_pred             CeEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCcccccc-------c--cCCceEEECCCCHHHHHHHHHhcCCCEEE
Confidence            57999999999 99999999999999998876543322111       1  11233556777888899999888899999


Q ss_pred             Ecccc
Q 025786          151 HFAAV  155 (248)
Q Consensus       151 ~~Ag~  155 (248)
                      +.+..
T Consensus        71 DAtHP   75 (256)
T TIGR00715        71 DATHP   75 (256)
T ss_pred             EcCCH
Confidence            98754

This enzyme was found to be a monomer by gel filtration.

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=98.25  E-value=0.00023  Score=54.24  Aligned_cols=142  Identities=18%  Similarity=0.197  Sum_probs=81.2

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHh-------hc
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFF-------SE  143 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~-------~~  143 (248)
                      .+|+|-||-|-+|+++++.|.+++|-|.-+|-...  +++           ..-..+..|-+=.++-+.++       ..
T Consensus         4 grVivYGGkGALGSacv~~FkannywV~siDl~eN--e~A-----------d~sI~V~~~~swtEQe~~v~~~vg~sL~g   70 (236)
T KOG4022|consen    4 GRVIVYGGKGALGSACVEFFKANNYWVLSIDLSEN--EQA-----------DSSILVDGNKSWTEQEQSVLEQVGSSLQG   70 (236)
T ss_pred             ceEEEEcCcchHhHHHHHHHHhcCeEEEEEeeccc--ccc-----------cceEEecCCcchhHHHHHHHHHHHHhhcc
Confidence            58999999999999999999999999988774221  110           11122333332222222222       22


Q ss_pred             CCCCEEEEcccccccCC-----CCCCchhhHhhhHHHHHHHHHHHH-Hc-CCCEEE-EeccceecCCCCCCCCCCCCCCC
Q 025786          144 NAFDAVMHFAAVAYVGE-----STLDPLKYYHNITSNTLVVLESMA-RH-GVDTLI-YSSTCATYGEPEKMPITEETPQA  215 (248)
Q Consensus       144 ~~iD~li~~Ag~~~~~~-----~~~~~~~~~~~~~~~~~~ll~~~~-~~-~~~~iV-~~SS~~~~g~~~~~~~~e~~~~~  215 (248)
                      .++|.|+.-||-...+.     ...+.+-.|++.+-.. .+...+. .+ +.+-++ ..+.-++.+           +.+
T Consensus        71 ekvDav~CVAGGWAGGnAksKdl~KNaDLMwKQSvwtS-aIsa~lAt~HLK~GGLL~LtGAkaAl~-----------gTP  138 (236)
T KOG4022|consen   71 EKVDAVFCVAGGWAGGNAKSKDLVKNADLMWKQSVWTS-AISAKLATTHLKPGGLLQLTGAKAALG-----------GTP  138 (236)
T ss_pred             cccceEEEeeccccCCCcchhhhhhchhhHHHHHHHHH-HHHHHHHHhccCCCceeeecccccccC-----------CCC
Confidence            58999999988543222     1122223333332211 1111111 11 223333 344444443           345


Q ss_pred             CCChHHHHHHHHHHHHHHHhhc
Q 025786          216 PINPYGKAKKMAEDIILDFSKN  237 (248)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~~~~  237 (248)
                      .+-.|+..|+++.+++++++.+
T Consensus       139 gMIGYGMAKaAVHqLt~SLaak  160 (236)
T KOG4022|consen  139 GMIGYGMAKAAVHQLTSSLAAK  160 (236)
T ss_pred             cccchhHHHHHHHHHHHHhccc
Confidence            5778999999999999999877

>cd00704 MDH Malate dehydrogenase

Probab=98.23  E-value=2.1e-05  Score=67.60  Aligned_cols=105  Identities=16%  Similarity=0.199  Sum_probs=68.9

Q ss_pred             EEEEecCCchhHHHHHHHHHHCCC-------EEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCH----------
Q 025786           72 HVLVTGGAGYIGSHAALRLLKDSY-------RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDA----------  134 (248)
Q Consensus        72 ~vlITGasg~IG~~la~~L~~~G~-------~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~----------  134 (248)
                      +|.||||+|.||..++..|+.+|.       +++++|+... .+.              ......|+.|.          
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~-~~~--------------~~g~~~Dl~d~~~~~~~~~~i   66 (323)
T cd00704           2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPA-MKA--------------LEGVVMELQDCAFPLLKGVVI   66 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCc-cCc--------------cceeeeehhhhcccccCCcEE
Confidence            689999999999999999998663       4888886431 011              11122222222          


Q ss_pred             -HHHHHHhhcCCCCEEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcC-CC-EEEEec
Q 025786          135 -KAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHG-VD-TLIYSS  195 (248)
Q Consensus       135 -~~~~~~~~~~~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~-~~-~iV~~S  195 (248)
                       .+..+.++  +.|+|||.||....  ...+..+.+..|......+.+.+.+.. .. .+|.+|
T Consensus        67 ~~~~~~~~~--~aDiVVitAG~~~~--~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvs  126 (323)
T cd00704          67 TTDPEEAFK--DVDVAILVGAFPRK--PGMERADLLRKNAKIFKEQGEALNKVAKPTVKVLVVG  126 (323)
T ss_pred             ecChHHHhC--CCCEEEEeCCCCCC--cCCcHHHHHHHhHHHHHHHHHHHHHhCCCCeEEEEeC
Confidence             12233343  68999999997532  234566778888888888999998873 44 455554

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=98.15  E-value=1.7e-05  Score=76.25  Aligned_cols=161  Identities=17%  Similarity=0.186  Sum_probs=104.0

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCE-EEEEecCCCC-cchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc----C
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYR-VTIVDNLSRG-NIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----N  144 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~-V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~----~  144 (248)
                      |..+|+||-||.|.+++.-|..+|++ +++..|+.-+ ...+ ..++.....+..+.+-..|++..+...+++++    +
T Consensus      1769 ksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa-~~vrrWr~~GVqV~vsT~nitt~~ga~~Li~~s~kl~ 1847 (2376)
T KOG1202|consen 1769 KSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQA-LMVRRWRRRGVQVQVSTSNITTAEGARGLIEESNKLG 1847 (2376)
T ss_pred             ceEEEeccccchhHHHHHHHHhcCceEEEEeccccchhhHHH-HHHHHHHhcCeEEEEecccchhhhhHHHHHHHhhhcc
Confidence            78999999999999999999999995 5555654322 1111 11222223345566666788888888888876    6


Q ss_pred             CCCEEEEcccccccCCCCCCchhhHhhh----HHHHHHHHHHHHHcC--CCEEEEeccc-eecCCCCCCCCCCCCCCCCC
Q 025786          145 AFDAVMHFAAVAYVGESTLDPLKYYHNI----TSNTLVVLESMARHG--VDTLIYSSTC-ATYGEPEKMPITEETPQAPI  217 (248)
Q Consensus       145 ~iD~li~~Ag~~~~~~~~~~~~~~~~~~----~~~~~~ll~~~~~~~--~~~iV~~SS~-~~~g~~~~~~~~e~~~~~~~  217 (248)
                      .+-.|+|+|.+......++...+.|+..    +.+|.++=..-++.-  ..-||..||. .+.|            ...+
T Consensus      1848 ~vGGiFnLA~VLRD~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~~LdyFv~FSSvscGRG------------N~GQ 1915 (2376)
T KOG1202|consen 1848 PVGGIFNLAAVLRDGLIENQTPKNFKDVAKPKYSGTINLDRVSREICPELDYFVVFSSVSCGRG------------NAGQ 1915 (2376)
T ss_pred             cccchhhHHHHHHhhhhcccChhHHHhhhccceeeeeehhhhhhhhCcccceEEEEEeecccCC------------CCcc
Confidence            7889999999876655555444444433    223444433333321  3567777774 3333            2337


Q ss_pred             ChHHHHHHHHHHHHHHHhhcCCCcEEEE
Q 025786          218 NPYGKAKKMAEDIILDFSKNSDMAVLQC  245 (248)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~~~~~gi~~~~v  245 (248)
                      +.||.+..+.|.+++.-.. .|.+.+.+
T Consensus      1916 tNYG~aNS~MERiceqRr~-~GfPG~Ai 1942 (2376)
T KOG1202|consen 1916 TNYGLANSAMERICEQRRH-EGFPGTAI 1942 (2376)
T ss_pred             cccchhhHHHHHHHHHhhh-cCCCccee
Confidence            7899999999999976433 56665544

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=98.15  E-value=2.6e-05  Score=58.97  Aligned_cols=114  Identities=20%  Similarity=0.241  Sum_probs=72.8

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC--EEEEEecCCCCcchhhhhhhhhcCCC-CceEEEEccCCCHHHHHHHhhcCCCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELFPEP-GRLQFIYADLGDAKAVNKFFSENAFD  147 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~iD  147 (248)
                      ++|.|+|++|.+|.+++..|...+.  +++++|+.....+.....++...... .......   .++++++      +.|
T Consensus         1 ~KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~---~~~~~~~------~aD   71 (141)
T PF00056_consen    1 MKVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITS---GDYEALK------DAD   71 (141)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEE---SSGGGGT------TES
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhccccccccc---ccccccc------ccc
Confidence            4799999999999999999999874  89999964332222222222221111 1222222   3444332      579


Q ss_pred             EEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCC-EEEEec
Q 025786          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD-TLIYSS  195 (248)
Q Consensus       148 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~-~iV~~S  195 (248)
                      +||-.||...  ....+..+.+..|......+.+.+.+.... .++.+|
T Consensus        72 ivvitag~~~--~~g~sR~~ll~~N~~i~~~~~~~i~~~~p~~~vivvt  118 (141)
T PF00056_consen   72 IVVITAGVPR--KPGMSRLDLLEANAKIVKEIAKKIAKYAPDAIVIVVT  118 (141)
T ss_dssp             EEEETTSTSS--STTSSHHHHHHHHHHHHHHHHHHHHHHSTTSEEEE-S
T ss_pred             EEEEeccccc--cccccHHHHHHHhHhHHHHHHHHHHHhCCccEEEEeC
Confidence            9999999753  223456677788888888899988887654 455554

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=98.14  E-value=3.8e-05  Score=66.09  Aligned_cols=106  Identities=14%  Similarity=0.115  Sum_probs=68.7

Q ss_pred             EEEEecCCchhHHHHHHHHHHCCC-------EEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHH---------
Q 025786           72 HVLVTGGAGYIGSHAALRLLKDSY-------RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAK---------  135 (248)
Q Consensus        72 ~vlITGasg~IG~~la~~L~~~G~-------~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~---------  135 (248)
                      +|.|+|++|.+|..++..|+..|.       +++++|+.....               .......|+.|..         
T Consensus         1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~---------------~a~g~~~Dl~d~~~~~~~~~~~   65 (324)
T TIGR01758         1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMK---------------VLEGVVMELMDCAFPLLDGVVP   65 (324)
T ss_pred             CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCccc---------------ccceeEeehhcccchhcCceec
Confidence            589999999999999999988553       588888632210               1122223333222         


Q ss_pred             --HHHHHhhcCCCCEEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcC-C-CEEEEecc
Q 025786          136 --AVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHG-V-DTLIYSST  196 (248)
Q Consensus       136 --~~~~~~~~~~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~-~-~~iV~~SS  196 (248)
                        +..+.++  +.|+||+.||....  ..++..+.+..|......+.+.+.+.. . ..+|.+|.
T Consensus        66 ~~~~~~~~~--~aDiVVitAG~~~~--~~~tr~~ll~~N~~i~k~i~~~i~~~~~~~~iiivvsN  126 (324)
T TIGR01758        66 THDPAVAFT--DVDVAILVGAFPRK--EGMERRDLLSKNVKIFKEQGRALDKLAKKDCKVLVVGN  126 (324)
T ss_pred             cCChHHHhC--CCCEEEEcCCCCCC--CCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeCC
Confidence              1123333  68999999997532  233456777888888888999998873 4 45555553

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>KOG4288 consensus Predicted oxidoreductase [General function prediction only]

Probab=98.02  E-value=2.1e-05  Score=63.10  Aligned_cols=147  Identities=18%  Similarity=0.186  Sum_probs=97.5

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li  150 (248)
                      ...++-|+.++.|.++++.....|+.|.++.++.++.     .++   .....+.++.+|....+-.+....  ++..++
T Consensus        53 e~tlvlggnpfsgs~vlk~A~~vv~svgilsen~~k~-----~l~---sw~~~vswh~gnsfssn~~k~~l~--g~t~v~  122 (283)
T KOG4288|consen   53 EWTLVLGGNPFSGSEVLKNATNVVHSVGILSENENKQ-----TLS---SWPTYVSWHRGNSFSSNPNKLKLS--GPTFVY  122 (283)
T ss_pred             HHHhhhcCCCcchHHHHHHHHhhceeeeEeecccCcc-----hhh---CCCcccchhhccccccCcchhhhc--CCcccH
Confidence            4689999999999999999999999999988654321     111   224567777777755443333332  456666


Q ss_pred             EcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCCChHHHHHHHHHHH
Q 025786          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDI  230 (248)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e~l  230 (248)
                      -++|...      ........|-+.+.+......+.+.++++|+|.. .+|-.         +..+ ..|-.+|.++|.-
T Consensus       123 e~~ggfg------n~~~m~~ing~ani~a~kaa~~~gv~~fvyISa~-d~~~~---------~~i~-rGY~~gKR~AE~E  185 (283)
T KOG4288|consen  123 EMMGGFG------NIILMDRINGTANINAVKAAAKAGVPRFVYISAH-DFGLP---------PLIP-RGYIEGKREAEAE  185 (283)
T ss_pred             HHhcCcc------chHHHHHhccHhhHHHHHHHHHcCCceEEEEEhh-hcCCC---------Cccc-hhhhccchHHHHH
Confidence            6665332      1122334455557778888889999999999863 22211         2222 3699999999964


Q ss_pred             HHHHhhcCCCcEEEEec
Q 025786          231 ILDFSKNSDMAVLQCHR  247 (248)
Q Consensus       231 ~~~~~~~~gi~~~~v~P  247 (248)
                      +..   .++.+-+++||
T Consensus       186 ll~---~~~~rgiilRP  199 (283)
T KOG4288|consen  186 LLK---KFRFRGIILRP  199 (283)
T ss_pred             HHH---hcCCCceeecc
Confidence            443   35677788888

>PRK14982 acyl-ACP reductase; Provisional

Probab=98.01  E-value=1.7e-05  Score=68.21  Aligned_cols=70  Identities=20%  Similarity=0.199  Sum_probs=47.2

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHC-C-CEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCC
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKD-S-YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFD  147 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~-G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD  147 (248)
                      +++|+||||+|.||+.++++|+++ | .+|++++|+..   .+.+...++         ...|+.   ++.+.+.  +.|
T Consensus       155 ~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~---rl~~La~el---------~~~~i~---~l~~~l~--~aD  217 (340)
T PRK14982        155 KATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQE---RLQELQAEL---------GGGKIL---SLEEALP--EAD  217 (340)
T ss_pred             CCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHH---HHHHHHHHh---------ccccHH---hHHHHHc--cCC
Confidence            389999999999999999999865 5 58888876432   222221221         112332   3445555  589


Q ss_pred             EEEEccccc
Q 025786          148 AVMHFAAVA  156 (248)
Q Consensus       148 ~li~~Ag~~  156 (248)
                      +|||+++..
T Consensus       218 iVv~~ts~~  226 (340)
T PRK14982        218 IVVWVASMP  226 (340)
T ss_pred             EEEECCcCC
Confidence            999999864

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=97.97  E-value=0.00023  Score=60.91  Aligned_cols=114  Identities=18%  Similarity=0.258  Sum_probs=72.6

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCC--CEEEEEecCCCCcchhhhhhhhhcC-CCCceEEEEccCCCHHHHHHHhhcCCCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDS--YRVTIVDNLSRGNIGAVKVLQELFP-EPGRLQFIYADLGDAKAVNKFFSENAFD  147 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~iD  147 (248)
                      ++|.|.|+ |++|+.++..|+..|  ++|+++++.....+.....+.+... .+...... .  .+++++    +  +.|
T Consensus         1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~-~--~~~~~l----~--~aD   70 (306)
T cd05291           1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIK-A--GDYSDC----K--DAD   70 (306)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEE-c--CCHHHh----C--CCC
Confidence            36888985 999999999999999  5899999765444433333332211 11122222 1  334332    2  689


Q ss_pred             EEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCC-EEEEecc
Q 025786          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD-TLIYSST  196 (248)
Q Consensus       148 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~-~iV~~SS  196 (248)
                      +||+++|....  ...+..+.+..|......+.+.+.+.... .++.+|.
T Consensus        71 IVIitag~~~~--~g~~R~dll~~N~~i~~~~~~~i~~~~~~~~vivvsN  118 (306)
T cd05291          71 IVVITAGAPQK--PGETRLDLLEKNAKIMKSIVPKIKASGFDGIFLVASN  118 (306)
T ss_pred             EEEEccCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecC
Confidence            99999997432  23345667778887788888888876644 4444543

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=97.96  E-value=1.9e-05  Score=67.05  Aligned_cols=80  Identities=10%  Similarity=0.226  Sum_probs=61.7

Q ss_pred             EEEEecCCchhHHHHHHHHHH----CCCEEEEEecCCCCcchhhhhhhhhcCCC----CceEEEEccCCCHHHHHHHhhc
Q 025786           72 HVLVTGGAGYIGSHAALRLLK----DSYRVTIVDNLSRGNIGAVKVLQELFPEP----GRLQFIYADLGDAKAVNKFFSE  143 (248)
Q Consensus        72 ~vlITGasg~IG~~la~~L~~----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~----~~~~~~~~Dl~~~~~~~~~~~~  143 (248)
                      -++|-|||||-|..+++++..    .|....+.+|+..   ++.+.++......    ....++.+|.+|++++.++.+ 
T Consensus         7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~---KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak-   82 (423)
T KOG2733|consen    7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEK---KLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAK-   82 (423)
T ss_pred             eEEEEccccccceeeHHHHhhhhcccCceEEEecCCHH---HHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHh-
Confidence            589999999999999999999    7888888886544   4444444432211    223388899999999999998 


Q ss_pred             CCCCEEEEccccc
Q 025786          144 NAFDAVMHFAAVA  156 (248)
Q Consensus       144 ~~iD~li~~Ag~~  156 (248)
                       +.-+|+||+|..
T Consensus        83 -~~~vivN~vGPy   94 (423)
T KOG2733|consen   83 -QARVIVNCVGPY   94 (423)
T ss_pred             -hhEEEEeccccc
Confidence             568999999964

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=97.88  E-value=0.00065  Score=58.30  Aligned_cols=113  Identities=19%  Similarity=0.222  Sum_probs=72.7

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC--EEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~  148 (248)
                      ++|.|+|+ |.+|..++..|+..|.  +++++|++....+.....+.+..+...++... .  .+++++    +  +.|+
T Consensus         7 ~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~-~--~~~~~~----~--~adi   76 (315)
T PRK00066          7 NKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIY-A--GDYSDC----K--DADL   76 (315)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEE-e--CCHHHh----C--CCCE
Confidence            78999997 9999999999999986  79999975443333222333322211222222 2  344433    2  6799


Q ss_pred             EEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCC-EEEEec
Q 025786          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD-TLIYSS  195 (248)
Q Consensus       149 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~-~iV~~S  195 (248)
                      ||..||....  ...+..+.+..|......+++.+.+.+.. .++.+|
T Consensus        77 vIitag~~~k--~g~~R~dll~~N~~i~~~i~~~i~~~~~~~~vivvs  122 (315)
T PRK00066         77 VVITAGAPQK--PGETRLDLVEKNLKIFKSIVGEVMASGFDGIFLVAS  122 (315)
T ss_pred             EEEecCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence            9999997532  23345667778887777788888776543 455444

>PF08643 DUF1776: Fungal family of unknown function (DUF1776); InterPro: IPR013952 This is a fungal protein of unknown function

Probab=97.84  E-value=0.0013  Score=55.59  Aligned_cols=159  Identities=11%  Similarity=0.117  Sum_probs=92.6

Q ss_pred             eEEEEecC-CchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc------
Q 025786           71 THVLVTGG-AGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE------  143 (248)
Q Consensus        71 k~vlITGa-sg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~------  143 (248)
                      ..|+|.|. +--|++.+|..|-++|+-|+++..+.   ++ .+.++...  ...+.....|..++.++...+.+      
T Consensus         4 evVvI~Gs~~~PltR~la~DLeRRGFIV~v~~~~~---ed-~~~ve~e~--~~dI~~L~ld~~~~~~~~~~l~~f~~~L~   77 (299)
T PF08643_consen    4 EVVVIAGSPHDPLTRSLALDLERRGFIVYVTVSSA---ED-EKYVESED--RPDIRPLWLDDSDPSSIHASLSRFASLLS   77 (299)
T ss_pred             eEEEEECCCCCccHHHHHHHHhhCCeEEEEEeCCH---HH-HHHHHhcc--CCCCCCcccCCCCCcchHHHHHHHHHHhc
Confidence            67899995 79999999999999999999987422   21 12222221  23466667777555444333332      


Q ss_pred             -------CCCCEEEEccccc-------ccCCCCCCchhhHhhhHH--------HHHHHHHHHHH---cCCCEEEEeccce
Q 025786          144 -------NAFDAVMHFAAVA-------YVGESTLDPLKYYHNITS--------NTLVVLESMAR---HGVDTLIYSSTCA  198 (248)
Q Consensus       144 -------~~iD~li~~Ag~~-------~~~~~~~~~~~~~~~~~~--------~~~~ll~~~~~---~~~~~iV~~SS~~  198 (248)
                             +.--...+..|+.       ..++.+.-+.+.|...+.        .++.++|.++.   .+.+.|++.-|..
T Consensus        78 ~p~~p~~~~~~h~l~L~svi~~Psl~yp~gPie~i~~s~~~~~ln~~ll~~~~~~q~lLPlL~~~~~~~~~iil~~Psi~  157 (299)
T PF08643_consen   78 RPHVPFPGAPPHHLQLKSVIFIPSLSYPTGPIETISPSSWADELNTRLLTPILTIQGLLPLLRSRSNQKSKIILFNPSIS  157 (299)
T ss_pred             CCCCCCCCCCCceeEEEEEEEecCCCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEeCchh
Confidence                   1112233444432       122333333444443221        25568999887   3333444443421


Q ss_pred             ecCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHhhcCC---CcEEEEe
Q 025786          199 TYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSD---MAVLQCH  246 (248)
Q Consensus       199 ~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e~l~~~~~~~~g---i~~~~v~  246 (248)
                      .           ....+...+-.....+.+.+...+.+|.+   ++|+.++
T Consensus       158 s-----------sl~~PfhspE~~~~~al~~~~~~LrrEl~~~~I~V~~i~  197 (299)
T PF08643_consen  158 S-----------SLNPPFHSPESIVSSALSSFFTSLRRELRPHNIDVTQIK  197 (299)
T ss_pred             h-----------ccCCCccCHHHHHHHHHHHHHHHHHHHhhhcCCceEEEE
Confidence            1           12334466777788888888888888854   9998876

One of the proteins P32792 from SWISSPROT has been localised to the mitochondria [].

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.78  E-value=0.00016  Score=65.11  Aligned_cols=74  Identities=23%  Similarity=0.246  Sum_probs=52.2

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li  150 (248)
                      |+|+|+|+++ +|.++++.|+++|++|+++++..  .+...+..+++..  ..+.++..|..+.     ..  +++|+||
T Consensus         6 k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~--~~~~~~~~~~l~~--~~~~~~~~~~~~~-----~~--~~~d~vv   73 (450)
T PRK14106          6 KKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKE--EDQLKEALEELGE--LGIELVLGEYPEE-----FL--EGVDLVV   73 (450)
T ss_pred             CEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCc--hHHHHHHHHHHHh--cCCEEEeCCcchh-----Hh--hcCCEEE
Confidence            8999999877 99999999999999999998642  1222222233321  1356777887651     12  3689999


Q ss_pred             Eccccc
Q 025786          151 HFAAVA  156 (248)
Q Consensus       151 ~~Ag~~  156 (248)
                      +++|+.
T Consensus        74 ~~~g~~   79 (450)
T PRK14106         74 VSPGVP   79 (450)
T ss_pred             ECCCCC
Confidence            999864

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.76  E-value=0.00043  Score=62.31  Aligned_cols=123  Identities=17%  Similarity=0.117  Sum_probs=72.6

Q ss_pred             eEEE----EecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCC
Q 025786           71 THVL----VTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAF  146 (248)
Q Consensus        71 k~vl----ITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~i  146 (248)
                      ..++    |+||+|++|.++++.|...|++|+...+.....        .. ...                      .++
T Consensus        35 ~~~~~~~~l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~--------~~-~~~----------------------~~~   83 (450)
T PRK08261         35 QPLLDGPVLVGGAGRLAEALAALLAGLGYDVVANNDGGLTW--------AA-GWG----------------------DRF   83 (450)
T ss_pred             CCCCCCceEEccCchhHHHHHHHHhhCCCeeeecCcccccc--------cc-CcC----------------------Ccc
Confidence            4555    888899999999999999999999864321100        00 001                      123


Q ss_pred             CEEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCCChHHHHHHH
Q 025786          147 DAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKM  226 (248)
Q Consensus       147 D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a  226 (248)
                      +.++.-+-      ....+++ ...........++.+.  ..++||+++|.....              ....|+.+|++
T Consensus        84 ~~~~~d~~------~~~~~~~-l~~~~~~~~~~l~~l~--~~griv~i~s~~~~~--------------~~~~~~~akaa  140 (450)
T PRK08261         84 GALVFDAT------GITDPAD-LKALYEFFHPVLRSLA--PCGRVVVLGRPPEAA--------------ADPAAAAAQRA  140 (450)
T ss_pred             cEEEEECC------CCCCHHH-HHHHHHHHHHHHHhcc--CCCEEEEEccccccC--------------CchHHHHHHHH
Confidence            33332111      0011111 1111222333444443  246999999855431              12359999999


Q ss_pred             HHHHHHHHhhcC--CCcEEEEec
Q 025786          227 AEDIILDFSKNS--DMAVLQCHR  247 (248)
Q Consensus       227 ~e~l~~~~~~~~--gi~~~~v~P  247 (248)
                      .+.+++.++.|+  ++++..+.|
T Consensus       141 l~gl~rsla~E~~~gi~v~~i~~  163 (450)
T PRK08261        141 LEGFTRSLGKELRRGATAQLVYV  163 (450)
T ss_pred             HHHHHHHHHHHhhcCCEEEEEec
Confidence            999999999984  678777765

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=97.73  E-value=0.00026  Score=55.89  Aligned_cols=75  Identities=27%  Similarity=0.373  Sum_probs=45.6

Q ss_pred             eEEEEecC----------------CchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCH
Q 025786           71 THVLVTGG----------------AGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDA  134 (248)
Q Consensus        71 k~vlITGa----------------sg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~  134 (248)
                      |+||||+|                ||-.|.++|+++..+|++|+++.... .          + +.+..+..+.  +.+.
T Consensus         4 k~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~-~----------~-~~p~~~~~i~--v~sa   69 (185)
T PF04127_consen    4 KKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPS-S----------L-PPPPGVKVIR--VESA   69 (185)
T ss_dssp             -EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TT-S---------------TTEEEEE---SSH
T ss_pred             CEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCc-c----------c-cccccceEEE--ecch
Confidence            77777765                78999999999999999999886421 1          0 1123455554  5566


Q ss_pred             HHHHHHhhc--CCCCEEEEcccccccC
Q 025786          135 KAVNKFFSE--NAFDAVMHFAAVAYVG  159 (248)
Q Consensus       135 ~~~~~~~~~--~~iD~li~~Ag~~~~~  159 (248)
                      +++.+.+.+  ...|++|++|++....
T Consensus        70 ~em~~~~~~~~~~~Di~I~aAAVsDf~   96 (185)
T PF04127_consen   70 EEMLEAVKELLPSADIIIMAAAVSDFR   96 (185)
T ss_dssp             HHHHHHHHHHGGGGSEEEE-SB--SEE
T ss_pred             hhhhhhhccccCcceeEEEecchhhee
Confidence            666555544  3469999999986543

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=97.69  E-value=9.9e-05  Score=55.31  Aligned_cols=73  Identities=21%  Similarity=0.218  Sum_probs=48.8

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCE-EEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYR-VTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~l  149 (248)
                      ++++|.|+ ||.|+.++..|.+.|++ |+++.|+..+   +.+..+.+  ....+.++..  .   ++.+.+.  ..|+|
T Consensus        13 ~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~r---a~~l~~~~--~~~~~~~~~~--~---~~~~~~~--~~Div   79 (135)
T PF01488_consen   13 KRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPER---AEALAEEF--GGVNIEAIPL--E---DLEEALQ--EADIV   79 (135)
T ss_dssp             SEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHH---HHHHHHHH--TGCSEEEEEG--G---GHCHHHH--TESEE
T ss_pred             CEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHH---HHHHHHHc--CccccceeeH--H---HHHHHHh--hCCeE
Confidence            89999996 99999999999999986 9998865433   33333333  1223444433  2   3334444  57999


Q ss_pred             EEccccc
Q 025786          150 MHFAAVA  156 (248)
Q Consensus       150 i~~Ag~~  156 (248)
                      ||+.+..
T Consensus        80 I~aT~~~   86 (135)
T PF01488_consen   80 INATPSG   86 (135)
T ss_dssp             EE-SSTT
T ss_pred             EEecCCC
Confidence            9997754

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=97.69  E-value=0.0012  Score=56.47  Aligned_cols=114  Identities=14%  Similarity=0.179  Sum_probs=69.2

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC--EEEEEecCCCCcchhhhhhhhhc----CCCCceEEEEccC-CCHHHHHHHhhc
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELF----PEPGRLQFIYADL-GDAKAVNKFFSE  143 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~~~~Dl-~~~~~~~~~~~~  143 (248)
                      ++|.|+|++|.+|..++..|+..|.  +|+++++.. +.+.+.....++.    ..+....   ... +|+++    ++ 
T Consensus         1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~-~~~~l~~~~~dl~d~~~~~~~~~~---i~~~~d~~~----l~-   71 (309)
T cd05294           1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPK-SLEKLKGLRLDIYDALAAAGIDAE---IKISSDLSD----VA-   71 (309)
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcc-cccccccccchhhhchhccCCCcE---EEECCCHHH----hC-
Confidence            5799999999999999999999986  499999732 1122211111111    0111111   111 23332    33 


Q ss_pred             CCCCEEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCC-CEEEEecc
Q 025786          144 NAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV-DTLIYSST  196 (248)
Q Consensus       144 ~~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~-~~iV~~SS  196 (248)
                       +.|++|-++|....  ...+..+.+..|......+.+.+.+... ..+|.+++
T Consensus        72 -~aDiViitag~p~~--~~~~r~dl~~~n~~i~~~~~~~i~~~~~~~~viv~~n  122 (309)
T cd05294          72 -GSDIVIITAGVPRK--EGMSRLDLAKKNAKIVKKYAKQIAEFAPDTKILVVTN  122 (309)
T ss_pred             -CCCEEEEecCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence             67999999986432  1223356667777778888888877643 35666665

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]

Probab=97.59  E-value=0.0018  Score=55.05  Aligned_cols=116  Identities=22%  Similarity=0.236  Sum_probs=71.3

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC--EEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~  148 (248)
                      ++|.|+|+ |+||+.++..|+.++.  +++++|......+.....+.........-..+..| .++++++      +.|+
T Consensus         1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~~i~~~-~~y~~~~------~aDi   72 (313)
T COG0039           1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSDVKITGD-GDYEDLK------GADI   72 (313)
T ss_pred             CeEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccCceEEecC-CChhhhc------CCCE
Confidence            47899999 9999999999988863  78999875332222111122211111111223333 3344443      5799


Q ss_pred             EEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEecc
Q 025786          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSST  196 (248)
Q Consensus       149 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS  196 (248)
                      ++-.||....  ...+-.+.+..|......+.+.+.+.....++.+-|
T Consensus        73 VvitAG~prK--pGmtR~DLl~~Na~I~~~i~~~i~~~~~d~ivlVvt  118 (313)
T COG0039          73 VVITAGVPRK--PGMTRLDLLEKNAKIVKDIAKAIAKYAPDAIVLVVT  118 (313)
T ss_pred             EEEeCCCCCC--CCCCHHHHHHhhHHHHHHHHHHHHhhCCCeEEEEec
Confidence            9999987532  234556777888888888888888876544444433

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=97.55  E-value=0.0034  Score=54.03  Aligned_cols=114  Identities=16%  Similarity=0.150  Sum_probs=71.5

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC-------EEEEEecCCCC--cchhhhhhhhhc-CCCCceEEEEccCCCHHHHHHH
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY-------RVTIVDNLSRG--NIGAVKVLQELF-PEPGRLQFIYADLGDAKAVNKF  140 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~-------~V~~~~r~~~~--~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~  140 (248)
                      -+|.|+|++|.+|.+++..|+..|.       +++++|.....  .+.....+.... .......+ ..  .++++++  
T Consensus         4 ~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i-~~--~~~~~~~--   78 (323)
T TIGR01759         4 VRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLAGVVA-TT--DPEEAFK--   78 (323)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhccccccCCcEE-ec--ChHHHhC--
Confidence            5799999999999999999998884       78888864311  111111111111 11111211 11  2333332  


Q ss_pred             hhcCCCCEEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCC-C-EEEEec
Q 025786          141 FSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV-D-TLIYSS  195 (248)
Q Consensus       141 ~~~~~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~-~-~iV~~S  195 (248)
                          +.|+||..||...  ....+..+.+..|......+.+.+.+... . .++.+|
T Consensus        79 ----daDvVVitAG~~~--k~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvs  129 (323)
T TIGR01759        79 ----DVDAALLVGAFPR--KPGMERADLLSKNGKIFKEQGKALNKVAKKDVKVLVVG  129 (323)
T ss_pred             ----CCCEEEEeCCCCC--CCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeC
Confidence                6799999999742  22346677788888888889999988764 4 444444

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=97.50  E-value=0.0023  Score=54.70  Aligned_cols=115  Identities=17%  Similarity=0.144  Sum_probs=70.8

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCC--CEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDS--YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~  148 (248)
                      ++|.|+|++|.+|.+++..|+.+|  .+++++|..  ..+...-.+....   ......... .+ +++.+.++  +.|+
T Consensus         1 ~KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~--~a~g~alDL~~~~---~~~~i~~~~-~~-~~~y~~~~--daDi   71 (310)
T cd01337           1 VKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIV--NTPGVAADLSHIN---TPAKVTGYL-GP-EELKKALK--GADV   71 (310)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecC--ccceeehHhHhCC---CcceEEEec-CC-CchHHhcC--CCCE
Confidence            478999999999999999999888  478999865  2211111122211   111111110 11 11223333  6799


Q ss_pred             EEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCC-EEEEecc
Q 025786          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD-TLIYSST  196 (248)
Q Consensus       149 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~-~iV~~SS  196 (248)
                      +|-.||....  ...+..+.+..|......+.+.+.+.++. .+|++|-
T Consensus        72 vvitaG~~~k--~g~tR~dll~~N~~i~~~i~~~i~~~~p~a~vivvtN  118 (310)
T cd01337          72 VVIPAGVPRK--PGMTRDDLFNINAGIVRDLATAVAKACPKALILIISN  118 (310)
T ss_pred             EEEeCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccC
Confidence            9999997422  23456677888888888888888887654 4555554

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK05442 malate dehydrogenase; Provisional

Probab=97.49  E-value=0.003  Score=54.48  Aligned_cols=116  Identities=14%  Similarity=0.083  Sum_probs=71.4

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCC-------EEEEEecCCCC--cchhhhhhhhhc-CCCCceEEEEccCCCHHHHHH
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSY-------RVTIVDNLSRG--NIGAVKVLQELF-PEPGRLQFIYADLGDAKAVNK  139 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~-------~V~~~~r~~~~--~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~  139 (248)
                      +++|.|+|++|.+|..++..|+..|.       +++++|.....  .+.....+.... +....+.+ ..  .++++++ 
T Consensus         4 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~i-~~--~~y~~~~-   79 (326)
T PRK05442          4 PVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVVI-TD--DPNVAFK-   79 (326)
T ss_pred             CcEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcEE-ec--ChHHHhC-
Confidence            47899999999999999999988764       68888864321  111111111111 11112222 11  2333332 


Q ss_pred             HhhcCCCCEEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcC--CCEEEEecc
Q 025786          140 FFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHG--VDTLIYSST  196 (248)
Q Consensus       140 ~~~~~~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~--~~~iV~~SS  196 (248)
                           +.|+||-.||....  ...+..+.+..|......+.+.+.+..  ...+|.+|.
T Consensus        80 -----daDiVVitaG~~~k--~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvsN  131 (326)
T PRK05442         80 -----DADVALLVGARPRG--PGMERKDLLEANGAIFTAQGKALNEVAARDVKVLVVGN  131 (326)
T ss_pred             -----CCCEEEEeCCCCCC--CCCcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCC
Confidence                 67999999996422  234667778888888888999998843  345555553

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=97.43  E-value=0.0022  Score=55.63  Aligned_cols=78  Identities=21%  Similarity=0.342  Sum_probs=53.2

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC-EEEEEecCCC---------------------CcchhhhhhhhhcCCCCceEEEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSR---------------------GNIGAVKVLQELFPEPGRLQFIY  128 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~-~V~~~~r~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~  128 (248)
                      ++|+|.|+ |++|.++++.|+..|. +++++|+..-                     +.+.+.+.++++.+ ..+++.+.
T Consensus        25 ~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp-~v~i~~~~  102 (338)
T PRK12475         25 KHVLIVGA-GALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINS-EVEIVPVV  102 (338)
T ss_pred             CcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCC-CcEEEEEe
Confidence            78999995 8899999999999998 8888886421                     11112233333322 33566777


Q ss_pred             ccCCCHHHHHHHhhcCCCCEEEEcc
Q 025786          129 ADLGDAKAVNKFFSENAFDAVMHFA  153 (248)
Q Consensus       129 ~Dl~~~~~~~~~~~~~~iD~li~~A  153 (248)
                      .|++ .+.++++++  +.|+||.+.
T Consensus       103 ~~~~-~~~~~~~~~--~~DlVid~~  124 (338)
T PRK12475        103 TDVT-VEELEELVK--EVDLIIDAT  124 (338)
T ss_pred             ccCC-HHHHHHHhc--CCCEEEEcC
Confidence            7875 456677776  689999764

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=97.43  E-value=0.0028  Score=54.95  Aligned_cols=108  Identities=26%  Similarity=0.452  Sum_probs=66.1

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC-EEEEEecCCC---------------------CcchhhhhhhhhcCCCCceEEEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSR---------------------GNIGAVKVLQELFPEPGRLQFIY  128 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~-~V~~~~r~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~  128 (248)
                      .+|+|.|+ ||+|.++++.|+..|. ++.++|...-                     +.+.+.+.++++.+ .-++..+.
T Consensus        25 ~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp-~v~v~~~~  102 (339)
T PRK07688         25 KHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINS-DVRVEAIV  102 (339)
T ss_pred             CcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCC-CcEEEEEe
Confidence            78999986 9999999999999998 8999986420                     01111222333322 23456666


Q ss_pred             ccCCCHHHHHHHhhcCCCCEEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecC
Q 025786          129 ADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYG  201 (248)
Q Consensus       129 ~Dl~~~~~~~~~~~~~~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g  201 (248)
                      .|++ .+.+.++++  +.|+||.+..         +        ......+-+.+.+.+. .+|+.++.+.+|
T Consensus       103 ~~~~-~~~~~~~~~--~~DlVid~~D---------n--------~~~r~~ln~~~~~~~i-P~i~~~~~g~~G  154 (339)
T PRK07688        103 QDVT-AEELEELVT--GVDLIIDATD---------N--------FETRFIVNDAAQKYGI-PWIYGACVGSYG  154 (339)
T ss_pred             ccCC-HHHHHHHHc--CCCEEEEcCC---------C--------HHHHHHHHHHHHHhCC-CEEEEeeeeeee
Confidence            6765 455666666  5799987632         1        1112234455666654 477776655554

>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases

Probab=97.37  E-value=0.007  Score=51.90  Aligned_cols=115  Identities=17%  Similarity=0.120  Sum_probs=69.8

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC--EEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~  148 (248)
                      ++|.|+|+ |.+|..++..|+..|.  +++++|.+....+.....+....+......+...  .|++++    +  +.|+
T Consensus         4 ~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~--~dy~~~----~--~adi   74 (312)
T cd05293           4 NKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEAD--KDYSVT----A--NSKV   74 (312)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEEC--CCHHHh----C--CCCE
Confidence            58999995 9999999999998874  7889886543322222222222211111122211  344433    2  6799


Q ss_pred             EEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCC-EEEEecc
Q 025786          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD-TLIYSST  196 (248)
Q Consensus       149 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~-~iV~~SS  196 (248)
                      ||.+||.... + ..+..+.+..|......+.+.+.+.... .++.+|.
T Consensus        75 vvitaG~~~k-~-g~~R~dll~~N~~i~~~~~~~i~~~~p~~~vivvsN  121 (312)
T cd05293          75 VIVTAGARQN-E-GESRLDLVQRNVDIFKGIIPKLVKYSPNAILLVVSN  121 (312)
T ss_pred             EEECCCCCCC-C-CCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEccC
Confidence            9999997532 2 3345566777777777777777776533 4444443

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PLN00112 malate dehydrogenase (NADP); Provisional

Probab=97.34  E-value=0.0061  Score=54.53  Aligned_cols=115  Identities=11%  Similarity=0.085  Sum_probs=73.8

Q ss_pred             eEEEEecCCchhHHHHHHHHHHC-------CC--EEEEEecCCCCcchhhhhhhhhc-CCCCceEEEEccCCCHHHHHHH
Q 025786           71 THVLVTGGAGYIGSHAALRLLKD-------SY--RVTIVDNLSRGNIGAVKVLQELF-PEPGRLQFIYADLGDAKAVNKF  140 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~-------G~--~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~  140 (248)
                      -+|.|+|++|.+|.+++-.|+..       |.  +++++|++....+...-.+++.. ....++.+ ..  .++++++  
T Consensus       101 ~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~i-~~--~~ye~~k--  175 (444)
T PLN00112        101 INVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVSI-GI--DPYEVFQ--  175 (444)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceEE-ec--CCHHHhC--
Confidence            57999999999999999999988       64  78888865544333222222221 11112221 12  2444443  


Q ss_pred             hhcCCCCEEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHH-cCC-CEEEEecc
Q 025786          141 FSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMAR-HGV-DTLIYSST  196 (248)
Q Consensus       141 ~~~~~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~-~~~-~~iV~~SS  196 (248)
                          +.|++|-.||....  ...+-.+.+..|......+.+.+.+ .+. ..||.+|.
T Consensus       176 ----daDiVVitAG~prk--pG~tR~dLl~~N~~I~k~i~~~I~~~a~p~~ivIVVsN  227 (444)
T PLN00112        176 ----DAEWALLIGAKPRG--PGMERADLLDINGQIFAEQGKALNEVASRNVKVIVVGN  227 (444)
T ss_pred             ----cCCEEEECCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEcCC
Confidence                57999999997422  2345667788888888888888888 454 35555553

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=97.32  E-value=0.0023  Score=54.15  Aligned_cols=74  Identities=18%  Similarity=0.229  Sum_probs=48.2

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHH---HHHHhhcCCCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKA---VNKFFSENAFD  147 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~---~~~~~~~~~iD  147 (248)
                      ++++|+|+++++|..+++.+...|.+|+++++...+    .+.+.++   +...   ..|..+.+.   +.+.....++|
T Consensus       146 ~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~----~~~~~~~---g~~~---~~~~~~~~~~~~~~~~~~~~~~d  215 (325)
T cd08253         146 ETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEG----AELVRQA---GADA---VFNYRAEDLADRILAATAGQGVD  215 (325)
T ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHH----HHHHHHc---CCCE---EEeCCCcCHHHHHHHHcCCCceE
Confidence            899999999999999999999999999988753322    1222222   1111   133333333   33333334699


Q ss_pred             EEEEccc
Q 025786          148 AVMHFAA  154 (248)
Q Consensus       148 ~li~~Ag  154 (248)
                      .++++++
T Consensus       216 ~vi~~~~  222 (325)
T cd08253         216 VIIEVLA  222 (325)
T ss_pred             EEEECCc
Confidence            9999986

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases

Probab=97.32  E-value=0.0087  Score=51.19  Aligned_cols=113  Identities=13%  Similarity=0.113  Sum_probs=70.5

Q ss_pred             EEEEecCCchhHHHHHHHHHHCCC--EEEEEecCCCCcchhhhhhhhhcCCC--CceEEEEccCCCHHHHHHHhhcCCCC
Q 025786           72 HVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELFPEP--GRLQFIYADLGDAKAVNKFFSENAFD  147 (248)
Q Consensus        72 ~vlITGasg~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~iD  147 (248)
                      +|.|.|+ |.+|..+|..|+.+|.  +++++|......+.....+.......  .++.+..   .|+++++      +.|
T Consensus         1 Ki~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~---~~y~~~~------~aD   70 (307)
T cd05290           1 KLVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRA---GDYDDCA------DAD   70 (307)
T ss_pred             CEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEE---CCHHHhC------CCC
Confidence            4778897 9999999999998885  79999865433332222222221111  1333332   3455443      579


Q ss_pred             EEEEcccccccCCCCCC-chhhHhhhHHHHHHHHHHHHHcCCCEEEEec
Q 025786          148 AVMHFAAVAYVGESTLD-PLKYYHNITSNTLVVLESMARHGVDTLIYSS  195 (248)
Q Consensus       148 ~li~~Ag~~~~~~~~~~-~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~S  195 (248)
                      +||-.||.... +.... -.+.+..|......+.+.+.+.+...++.+-
T Consensus        71 ivvitaG~~~k-pg~tr~R~dll~~N~~I~~~i~~~i~~~~p~~i~ivv  118 (307)
T cd05290          71 IIVITAGPSID-PGNTDDRLDLAQTNAKIIREIMGNITKVTKEAVIILI  118 (307)
T ss_pred             EEEECCCCCCC-CCCCchHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEe
Confidence            99999997432 22221 3677788888888888888887754444433

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK06223 malate dehydrogenase; Reviewed

Probab=97.31  E-value=0.0075  Score=51.53  Aligned_cols=115  Identities=18%  Similarity=0.142  Sum_probs=64.9

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCC-EEEEEecCCCCcchhhhhhhhhcC-CCCceEEEEccCCCHHHHHHHhhcCCCC
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFP-EPGRLQFIYADLGDAKAVNKFFSENAFD  147 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~iD  147 (248)
                      |++|.|.|+ |.+|..++..++..|. +|+++|++....+.....+.+... ...... +.. -+|.++    ++  +.|
T Consensus         2 ~~KI~VIGa-G~vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~dl~~~~~~~~~~~~-i~~-~~d~~~----~~--~aD   72 (307)
T PRK06223          2 RKKISIIGA-GNVGATLAHLLALKELGDVVLFDIVEGVPQGKALDIAEAAPVEGFDTK-ITG-TNDYED----IA--GSD   72 (307)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEEECCCchhHHHHHHHHhhhhhcCCCcE-EEe-CCCHHH----HC--CCC
Confidence            578999998 9999999999999875 999999754332211111111111 111111 111 123332    23  679


Q ss_pred             EEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCC-EEEEec
Q 025786          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD-TLIYSS  195 (248)
Q Consensus       148 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~-~iV~~S  195 (248)
                      +||.++|....  ......+....|......+++.+.+.... .+|++|
T Consensus        73 iVii~~~~p~~--~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~viv~t  119 (307)
T PRK06223         73 VVVITAGVPRK--PGMSRDDLLGINAKIMKDVAEGIKKYAPDAIVIVVT  119 (307)
T ss_pred             EEEECCCCCCC--cCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            99999986432  12233444556666666666666665433 344444

>cd00300 LDH_like L-lactate dehydrogenase-like enzymes

Probab=97.29  E-value=0.0075  Score=51.46  Aligned_cols=113  Identities=17%  Similarity=0.190  Sum_probs=68.9

Q ss_pred             EEEecCCchhHHHHHHHHHHCC--CEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 025786           73 VLVTGGAGYIGSHAALRLLKDS--YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (248)
Q Consensus        73 vlITGasg~IG~~la~~L~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li  150 (248)
                      |.|.|+ |++|..++..|+..|  .+++++|......+.....+.+.........+...  .|++++    +  +.|++|
T Consensus         1 i~iiGa-G~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~~--~~~~~l----~--~aDiVI   71 (300)
T cd00300           1 ITIIGA-GNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVRG--GDYADA----A--DADIVV   71 (300)
T ss_pred             CEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEEC--CCHHHh----C--CCCEEE
Confidence            356775 889999999999998  68999997544333333333333221112222221  233333    2  679999


Q ss_pred             EcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCC-EEEEecc
Q 025786          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD-TLIYSST  196 (248)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~-~iV~~SS  196 (248)
                      .+||....  ...+..+.+..|......+.+.+++..+. .++++|.
T Consensus        72 itag~p~~--~~~~R~~l~~~n~~i~~~~~~~i~~~~p~~~viv~sN  116 (300)
T cd00300          72 ITAGAPRK--PGETRLDLINRNAPILRSVITNLKKYGPDAIILVVSN  116 (300)
T ss_pred             EcCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccC
Confidence            99997432  22345566777777777788888776643 4555553

Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=97.28  E-value=0.0029  Score=52.88  Aligned_cols=114  Identities=18%  Similarity=0.176  Sum_probs=69.2

Q ss_pred             EEEecCCchhHHHHHHHHHHCC----CEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 025786           73 VLVTGGAGYIGSHAALRLLKDS----YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (248)
Q Consensus        73 vlITGasg~IG~~la~~L~~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~  148 (248)
                      |.|.||+|.+|..++..|+..|    .+|+++|......+.....+++.........+.   .+  ++..+.++  +.|+
T Consensus         1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~~~~~i~---~~--~d~~~~~~--~aDi   73 (263)
T cd00650           1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPLADIKVS---IT--DDPYEAFK--DADV   73 (263)
T ss_pred             CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhccCcEEE---EC--CchHHHhC--CCCE
Confidence            4689998999999999999999    789999976544443333333332111011111   11  12233343  6899


Q ss_pred             EEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCC-EEEEec
Q 025786          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD-TLIYSS  195 (248)
Q Consensus       149 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~-~iV~~S  195 (248)
                      ||..+|.....  .....+....|....+.+.+.+.+..+. .++++|
T Consensus        74 Vv~t~~~~~~~--g~~r~~~~~~n~~i~~~i~~~i~~~~p~a~~i~~t  119 (263)
T cd00650          74 VIITAGVGRKP--GMGRLDLLKRNVPIVKEIGDNIEKYSPDAWIIVVS  119 (263)
T ss_pred             EEECCCCCCCc--CCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            99999865322  2233455666666677777777776543 444444

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent

Probab=97.26  E-value=0.0052  Score=52.61  Aligned_cols=114  Identities=18%  Similarity=0.212  Sum_probs=68.7

Q ss_pred             EEEEecCCchhHHHHHHHHHHCCC--EEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 025786           72 HVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (248)
Q Consensus        72 ~vlITGasg~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~l  149 (248)
                      +|.|+|++|.+|.+++..|+.++.  +++++|...  .+.....+...   .....+.... .+ +++.+.++  +.|+|
T Consensus         1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~--a~g~a~DL~~~---~~~~~i~~~~-~~-~~~~~~~~--daDiv   71 (312)
T TIGR01772         1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAG--AAGVAADLSHI---PTAASVKGFS-GE-EGLENALK--GADVV   71 (312)
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCC--CcEEEchhhcC---CcCceEEEec-CC-CchHHHcC--CCCEE
Confidence            478999999999999999998875  788888644  11111111111   1111222111 01 11223333  67999


Q ss_pred             EEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCC-EEEEecc
Q 025786          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD-TLIYSST  196 (248)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~-~iV~~SS  196 (248)
                      |-.||....  ...+..+.+..|......+.+.+.+..+. .||.+|-
T Consensus        72 vitaG~~~~--~g~~R~dll~~N~~I~~~i~~~i~~~~p~~iiivvsN  117 (312)
T TIGR01772        72 VIPAGVPRK--PGMTRDDLFNVNAGIVKDLVAAVAESCPKAMILVITN  117 (312)
T ss_pred             EEeCCCCCC--CCccHHHHHHHhHHHHHHHHHHHHHhCCCeEEEEecC
Confidence            999997432  23345567777877778888888777654 4444554

Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.

>PLN02602 lactate dehydrogenase

Probab=97.25  E-value=0.013  Score=50.99  Aligned_cols=114  Identities=20%  Similarity=0.167  Sum_probs=70.3

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC--EEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~  148 (248)
                      ++|.|+|+ |.+|..++..|+.+|.  +++++|......+.....+...........+ .. -.|+++++      +.|+
T Consensus        38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~~i-~~-~~dy~~~~------daDi  108 (350)
T PLN02602         38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRTKI-LA-STDYAVTA------GSDL  108 (350)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCCEE-Ee-CCCHHHhC------CCCE
Confidence            58999995 9999999999998874  7899986543332222222222111112222 21 12444332      6799


Q ss_pred             EEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCC-EEEEec
Q 025786          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD-TLIYSS  195 (248)
Q Consensus       149 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~-~iV~~S  195 (248)
                      ||-.||....  ...+..+.+..|......+.+.+.+.... .+|++|
T Consensus       109 VVitAG~~~k--~g~tR~dll~~N~~I~~~i~~~I~~~~p~~ivivvt  154 (350)
T PLN02602        109 CIVTAGARQI--PGESRLNLLQRNVALFRKIIPELAKYSPDTILLIVS  154 (350)
T ss_pred             EEECCCCCCC--cCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            9999997532  23345567777777777788888776543 455555

>PTZ00082 L-lactate dehydrogenase; Provisional

Probab=97.22  E-value=0.014  Score=50.19  Aligned_cols=117  Identities=14%  Similarity=0.105  Sum_probs=66.8

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC-EEEEEecCCCCcch-hhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIG-AVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~-~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~  148 (248)
                      ++|.|.| +|.+|..++..++..|. +|+++|.++..... ..+........+....+..  -+|++++    +  +.|+
T Consensus         7 ~KI~IIG-aG~vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~~--~~d~~~l----~--~aDi   77 (321)
T PTZ00082          7 RKISLIG-SGNIGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVIG--TNNYEDI----A--GSDV   77 (321)
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEEE--CCCHHHh----C--CCCE
Confidence            6899999 59999999999999995 89999975543211 1111111101111122221  1344333    3  6799


Q ss_pred             EEEcccccccCCC---CCCchhhHhhhHHHHHHHHHHHHHcCCC-EEEEecc
Q 025786          149 VMHFAAVAYVGES---TLDPLKYYHNITSNTLVVLESMARHGVD-TLIYSST  196 (248)
Q Consensus       149 li~~Ag~~~~~~~---~~~~~~~~~~~~~~~~~ll~~~~~~~~~-~iV~~SS  196 (248)
                      ||..||.......   +.+..+.+..|......+.+.+.+..+. .++++|-
T Consensus        78 VI~tag~~~~~~~~~~~~~r~~~l~~n~~i~~~i~~~i~~~~p~a~~iv~sN  129 (321)
T PTZ00082         78 VIVTAGLTKRPGKSDKEWNRDDLLPLNAKIMDEVAEGIKKYCPNAFVIVITN  129 (321)
T ss_pred             EEECCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence            9999997532211   1133445556666666677777666544 4555543

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=97.21  E-value=0.00086  Score=51.10  Aligned_cols=72  Identities=17%  Similarity=0.167  Sum_probs=46.1

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCC-CEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDS-YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~l  149 (248)
                      ++++|+|+ |++|..+++.|.+.| ++|++++|+..+.   .+..+++..   .  .+..+..+.+++   ++  +.|+|
T Consensus        20 ~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~---~~~~~~~~~---~--~~~~~~~~~~~~---~~--~~Dvv   85 (155)
T cd01065          20 KKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKA---KALAERFGE---L--GIAIAYLDLEEL---LA--EADLI   85 (155)
T ss_pred             CEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHH---HHHHHHHhh---c--ccceeecchhhc---cc--cCCEE
Confidence            78999997 999999999999996 7899988643322   222222211   0  012333343332   33  68999


Q ss_pred             EEccccc
Q 025786          150 MHFAAVA  156 (248)
Q Consensus       150 i~~Ag~~  156 (248)
                      |++....
T Consensus        86 i~~~~~~   92 (155)
T cd01065          86 INTTPVG   92 (155)
T ss_pred             EeCcCCC
Confidence            9998654

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>PTZ00117 malate dehydrogenase; Provisional

Probab=97.20  E-value=0.016  Score=49.86  Aligned_cols=115  Identities=18%  Similarity=0.168  Sum_probs=66.0

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCC-CEEEEEecCCCCcchhhhhhhhhcCC-CCceEEEEccCCCHHHHHHHhhcCCCCE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDS-YRVTIVDNLSRGNIGAVKVLQELFPE-PGRLQFIYADLGDAKAVNKFFSENAFDA  148 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~iD~  148 (248)
                      ++|.|.|| |.+|..++..++..| ++|+++|.+....+...-.+...... +.... +.. -+|+++    ++  +.|+
T Consensus         6 ~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~~-i~~-~~d~~~----l~--~ADi   76 (319)
T PTZ00117          6 KKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHFSTLVGSNIN-ILG-TNNYED----IK--DSDV   76 (319)
T ss_pred             cEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhhccccCCCeE-EEe-CCCHHH----hC--CCCE
Confidence            68999996 999999999999999 78999997543322111111111110 11111 221 123332    23  6799


Q ss_pred             EEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCE-EEEecc
Q 025786          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDT-LIYSST  196 (248)
Q Consensus       149 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~-iV~~SS  196 (248)
                      ||.+||.....  ..+..+.+..|......+.+.+.+..+.. +|++|.
T Consensus        77 VVitag~~~~~--g~~r~dll~~n~~i~~~i~~~i~~~~p~a~vivvsN  123 (319)
T PTZ00117         77 VVITAGVQRKE--EMTREDLLTINGKIMKSVAESVKKYCPNAFVICVTN  123 (319)
T ss_pred             EEECCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence            99999864321  22344555556555666777776665443 555543

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=97.19  E-value=0.00084  Score=56.63  Aligned_cols=35  Identities=26%  Similarity=0.345  Sum_probs=30.8

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCC-CEEEEEecCCCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDS-YRVTIVDNLSRG  106 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G-~~V~~~~r~~~~  106 (248)
                      ++++|+|+ ||+|++++..|...| .+|++++|+..+
T Consensus       124 k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~  159 (278)
T PRK00258        124 KRILILGA-GGAARAVILPLLDLGVAEITIVNRTVER  159 (278)
T ss_pred             CEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHH
Confidence            88999996 999999999999999 689999875443

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=97.19  E-value=0.0043  Score=52.99  Aligned_cols=74  Identities=19%  Similarity=0.145  Sum_probs=49.2

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhh---cCCCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFS---ENAFD  147 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---~~~iD  147 (248)
                      ++++|+|+++++|.++++.+...|++|++++++..+    .+.+...   ...   ...|..+.+....+.+   ..++|
T Consensus       168 ~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~----~~~~~~~---~~~---~~~~~~~~~~~~~~~~~~~~~~~d  237 (342)
T cd08266         168 ETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDK----LERAKEL---GAD---YVIDYRKEDFVREVRELTGKRGVD  237 (342)
T ss_pred             CEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHH----HHHHHHc---CCC---eEEecCChHHHHHHHHHhCCCCCc
Confidence            789999999999999999999999999988753321    1222222   111   1235555444433332   24699


Q ss_pred             EEEEccc
Q 025786          148 AVMHFAA  154 (248)
Q Consensus       148 ~li~~Ag  154 (248)
                      ++++++|
T Consensus       238 ~~i~~~g  244 (342)
T cd08266         238 VVVEHVG  244 (342)
T ss_pred             EEEECCc
Confidence            9999987

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.17  E-value=0.0019  Score=58.12  Aligned_cols=75  Identities=25%  Similarity=0.257  Sum_probs=47.3

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li  150 (248)
                      |+++|||+++ +|.++++.|+++|++|++.++.........+.+++.     .+.+...+  +..++   +. .++|+||
T Consensus         6 k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~~-----g~~~~~~~--~~~~~---~~-~~~d~vV   73 (447)
T PRK02472          6 KKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLEE-----GIKVICGS--HPLEL---LD-EDFDLMV   73 (447)
T ss_pred             CEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHhc-----CCEEEeCC--CCHHH---hc-CcCCEEE
Confidence            8999999976 999999999999999999986432222221222211     23333222  11221   22 1389999


Q ss_pred             Ecccccc
Q 025786          151 HFAAVAY  157 (248)
Q Consensus       151 ~~Ag~~~  157 (248)
                      +++|+..
T Consensus        74 ~s~gi~~   80 (447)
T PRK02472         74 KNPGIPY   80 (447)
T ss_pred             ECCCCCC
Confidence            9999754

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=97.15  E-value=0.0015  Score=54.90  Aligned_cols=72  Identities=21%  Similarity=0.282  Sum_probs=46.2

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li  150 (248)
                      ++++|+|+ |++|++++..|++.|++|++++|+..+.++   ..+.+... +.......|     +.  ..  .+.|+||
T Consensus       118 k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~---la~~~~~~-~~~~~~~~~-----~~--~~--~~~DivI  183 (270)
T TIGR00507       118 QRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEE---LAERFQRY-GEIQAFSMD-----EL--PL--HRVDLII  183 (270)
T ss_pred             CEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHH---HHHHHhhc-CceEEechh-----hh--cc--cCccEEE
Confidence            78999997 899999999999999999998875433322   22222111 112222111     11  11  2589999


Q ss_pred             Eccccc
Q 025786          151 HFAAVA  156 (248)
Q Consensus       151 ~~Ag~~  156 (248)
                      |+.+..
T Consensus       184 natp~g  189 (270)
T TIGR00507       184 NATSAG  189 (270)
T ss_pred             ECCCCC
Confidence            998864

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=97.14  E-value=0.0078  Score=49.14  Aligned_cols=75  Identities=19%  Similarity=0.278  Sum_probs=53.6

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li  150 (248)
                      |+++|.| .|-+|+.+|+.|.++|++|+++++...   ...+...    .......+.+|-+|++.++++-- .+.|++|
T Consensus         1 m~iiIiG-~G~vG~~va~~L~~~g~~Vv~Id~d~~---~~~~~~~----~~~~~~~v~gd~t~~~~L~~agi-~~aD~vv   71 (225)
T COG0569           1 MKIIIIG-AGRVGRSVARELSEEGHNVVLIDRDEE---RVEEFLA----DELDTHVVIGDATDEDVLEEAGI-DDADAVV   71 (225)
T ss_pred             CEEEEEC-CcHHHHHHHHHHHhCCCceEEEEcCHH---HHHHHhh----hhcceEEEEecCCCHHHHHhcCC-CcCCEEE
Confidence            4677777 588999999999999999999985332   2222111    12357889999999998887732 2679988


Q ss_pred             Eccc
Q 025786          151 HFAA  154 (248)
Q Consensus       151 ~~Ag  154 (248)
                      -.-+
T Consensus        72 a~t~   75 (225)
T COG0569          72 AATG   75 (225)
T ss_pred             EeeC
Confidence            5543

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=97.11  E-value=0.0038  Score=54.26  Aligned_cols=75  Identities=20%  Similarity=0.220  Sum_probs=50.4

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCC-CEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhh--cCCC
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDS-YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFS--ENAF  146 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~~i  146 (248)
                      ++.|||.||+||+|.+.++-....| .+|+.++ +.    +..+..+.+..   .   ...|..+++-++...+  ..++
T Consensus       158 g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~-s~----e~~~l~k~lGA---d---~vvdy~~~~~~e~~kk~~~~~~  226 (347)
T KOG1198|consen  158 GKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTAC-SK----EKLELVKKLGA---D---EVVDYKDENVVELIKKYTGKGV  226 (347)
T ss_pred             CCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEc-cc----chHHHHHHcCC---c---EeecCCCHHHHHHHHhhcCCCc
Confidence            3899999999999999999888889 5555544 22    22333344421   1   2356666555554444  3579


Q ss_pred             CEEEEcccc
Q 025786          147 DAVMHFAAV  155 (248)
Q Consensus       147 D~li~~Ag~  155 (248)
                      |+|+.|.|.
T Consensus       227 DvVlD~vg~  235 (347)
T KOG1198|consen  227 DVVLDCVGG  235 (347)
T ss_pred             cEEEECCCC
Confidence            999999985

>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases

Probab=97.10  E-value=0.011  Score=50.68  Aligned_cols=112  Identities=19%  Similarity=0.196  Sum_probs=64.8

Q ss_pred             EEEEecCCchhHHHHHHHHHHCC--CEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 025786           72 HVLVTGGAGYIGSHAALRLLKDS--YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (248)
Q Consensus        72 ~vlITGasg~IG~~la~~L~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~l  149 (248)
                      +|.|.|+ |.+|..++..|+.+|  .+|+++|++....+.....+..............   .++++    ++  +.|++
T Consensus         2 kI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i~~---~d~~~----l~--~aDiV   71 (308)
T cd05292           2 KVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIYA---GDYAD----CK--GADVV   71 (308)
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCCeEEee---CCHHH----hC--CCCEE
Confidence            6889997 999999999999999  5899999754332211111111111111122221   23333    23  67999


Q ss_pred             EEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCC-EEEEec
Q 025786          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD-TLIYSS  195 (248)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~-~iV~~S  195 (248)
                      |.+++....  ...+..+....|......+.+.+.+.... .++.++
T Consensus        72 iita~~~~~--~~~~r~dl~~~n~~i~~~~~~~l~~~~~~giiiv~t  116 (308)
T cd05292          72 VITAGANQK--PGETRLDLLKRNVAIFKEIIPQILKYAPDAILLVVT  116 (308)
T ss_pred             EEccCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            999986432  12334455566666666677777665433 444443

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=97.10  E-value=0.017  Score=43.03  Aligned_cols=107  Identities=24%  Similarity=0.374  Sum_probs=64.8

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC-EEEEEecCCCCcc-------------------hhhhhhhhhcCCCCceEEEEcc
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNI-------------------GAVKVLQELFPEPGRLQFIYAD  130 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~-~V~~~~r~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~D  130 (248)
                      ++|+|.| .|++|.++++.|+..|. +++++|...-..+                   .+.+.++++.+ ..++..+..+
T Consensus         3 ~~v~iiG-~G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np-~~~v~~~~~~   80 (135)
T PF00899_consen    3 KRVLIIG-AGGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINP-DVEVEAIPEK   80 (135)
T ss_dssp             -EEEEES-TSHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHST-TSEEEEEESH
T ss_pred             CEEEEEC-cCHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcC-ceeeeeeecc
Confidence            6888988 69999999999999998 7888884311100                   01122233322 3456777777


Q ss_pred             CCCHHHHHHHhhcCCCCEEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceec
Q 025786          131 LGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATY  200 (248)
Q Consensus       131 l~~~~~~~~~~~~~~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~  200 (248)
                      + +.+...++++  ..|+||.+...                 ......+.+.+.+.+. .+|+.+..+.+
T Consensus        81 ~-~~~~~~~~~~--~~d~vi~~~d~-----------------~~~~~~l~~~~~~~~~-p~i~~~~~g~~  129 (135)
T PF00899_consen   81 I-DEENIEELLK--DYDIVIDCVDS-----------------LAARLLLNEICREYGI-PFIDAGVNGFY  129 (135)
T ss_dssp             C-SHHHHHHHHH--TSSEEEEESSS-----------------HHHHHHHHHHHHHTT--EEEEEEEETTE
T ss_pred             c-cccccccccc--CCCEEEEecCC-----------------HHHHHHHHHHHHHcCC-CEEEEEeecCE
Confidence            7 4566777775  67999986431                 1112234456666654 67776654443

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=97.08  E-value=0.0012  Score=60.68  Aligned_cols=32  Identities=25%  Similarity=0.292  Sum_probs=29.7

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNL  103 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~  103 (248)
                      |+++|+|+ ||+|++++..|++.|++|++++|+
T Consensus       380 k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~  411 (529)
T PLN02520        380 KLFVVIGA-GGAGKALAYGAKEKGARVVIANRT  411 (529)
T ss_pred             CEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCC
Confidence            89999998 799999999999999999998764

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=97.08  E-value=0.0087  Score=48.01  Aligned_cols=78  Identities=28%  Similarity=0.327  Sum_probs=49.9

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC-EEEEEecCCCCc-------------------chhhhhhhhhcCCCCceEEEEcc
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGN-------------------IGAVKVLQELFPEPGRLQFIYAD  130 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~-~V~~~~r~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~D  130 (248)
                      ++|+|.| .|++|.++++.|+..|. +++++|...-..                   +.+.+.++++.+ ..++..+..+
T Consensus        22 ~~VlviG-~GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np-~v~i~~~~~~   99 (202)
T TIGR02356        22 SHVLIIG-AGGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNS-DIQVTALKER   99 (202)
T ss_pred             CCEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCC-CCEEEEehhc
Confidence            7899998 79999999999999997 888988542111                   111222333321 2244445445


Q ss_pred             CCCHHHHHHHhhcCCCCEEEEcc
Q 025786          131 LGDAKAVNKFFSENAFDAVMHFA  153 (248)
Q Consensus       131 l~~~~~~~~~~~~~~iD~li~~A  153 (248)
                      +. .+.+.++++  +.|+||.+.
T Consensus       100 i~-~~~~~~~~~--~~D~Vi~~~  119 (202)
T TIGR02356       100 VT-AENLELLIN--NVDLVLDCT  119 (202)
T ss_pred             CC-HHHHHHHHh--CCCEEEECC
Confidence            53 355666665  679998764

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate

Probab=97.06  E-value=0.016  Score=42.41  Aligned_cols=96  Identities=15%  Similarity=0.211  Sum_probs=52.2

Q ss_pred             EEEEecCCchhHHHHHHHHHHCC-CEEEEE-ecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 025786           72 HVLVTGGAGYIGSHAALRLLKDS-YRVTIV-DNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (248)
Q Consensus        72 ~vlITGasg~IG~~la~~L~~~G-~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~l  149 (248)
                      +|.|.||||.+|+++++.|.++- ++++.+ ++............... .....+.+..   .+.+.+      .++|++
T Consensus         1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~---~~~~~~------~~~Dvv   70 (121)
T PF01118_consen    1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHP-KGFEDLSVED---ADPEEL------SDVDVV   70 (121)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGG-TTTEEEBEEE---TSGHHH------TTESEE
T ss_pred             CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhcccc-ccccceeEee---cchhHh------hcCCEE
Confidence            68999999999999999999864 465544 43221222222211111 0111222222   233333      268999


Q ss_pred             EEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEecc
Q 025786          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSST  196 (248)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS  196 (248)
                      |.+.+.                  .....+.+.+.+.+. +||=.|+
T Consensus        71 f~a~~~------------------~~~~~~~~~~~~~g~-~ViD~s~   98 (121)
T PF01118_consen   71 FLALPH------------------GASKELAPKLLKAGI-KVIDLSG   98 (121)
T ss_dssp             EE-SCH------------------HHHHHHHHHHHHTTS-EEEESSS
T ss_pred             EecCch------------------hHHHHHHHHHhhCCc-EEEeCCH
Confidence            988642                  124456666667665 6665665

This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....

>PRK06849 hypothetical protein; Provisional

Probab=97.04  E-value=0.0045  Score=54.75  Aligned_cols=78  Identities=15%  Similarity=0.133  Sum_probs=50.0

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCH----HHHHHHhhcCC
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDA----KAVNKFFSENA  145 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~----~~~~~~~~~~~  145 (248)
                      +|+|||||++..+|..+++.|.+.|++|++++.....   .....+..    .....+...-.|.    +.+.+++++.+
T Consensus         4 ~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~---~~~~s~~~----d~~~~~p~p~~d~~~~~~~L~~i~~~~~   76 (389)
T PRK06849          4 KKTVLITGARAPAALELARLFHNAGHTVILADSLKYP---LSRFSRAV----DGFYTIPSPRWDPDAYIQALLSIVQREN   76 (389)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchH---HHHHHHhh----hheEEeCCCCCCHHHHHHHHHHHHHHcC
Confidence            3899999999999999999999999999999853211   11111100    1122221112233    45556666677


Q ss_pred             CCEEEEccc
Q 025786          146 FDAVMHFAA  154 (248)
Q Consensus       146 iD~li~~Ag  154 (248)
                      +|+||-...
T Consensus        77 id~vIP~~e   85 (389)
T PRK06849         77 IDLLIPTCE   85 (389)
T ss_pred             CCEEEECCh
Confidence            999997664

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=97.02  E-value=0.0021  Score=57.91  Aligned_cols=72  Identities=15%  Similarity=0.240  Sum_probs=52.2

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHH-hhcCCCCEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKF-FSENAFDAV  149 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~~iD~l  149 (248)
                      |+|+|.|+ |.+|+++++.|.++|++|++++++....    +.+++    ...+.++.+|.++.+.++++ ++  +.|.+
T Consensus         1 m~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~----~~~~~----~~~~~~~~gd~~~~~~l~~~~~~--~a~~v   69 (453)
T PRK09496          1 MKIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERL----RRLQD----RLDVRTVVGNGSSPDVLREAGAE--DADLL   69 (453)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHH----HHHHh----hcCEEEEEeCCCCHHHHHHcCCC--cCCEE
Confidence            46888887 9999999999999999999998643221    11111    12467888999998888776 43  57877


Q ss_pred             EEcc
Q 025786          150 MHFA  153 (248)
Q Consensus       150 i~~A  153 (248)
                      |-+.
T Consensus        70 i~~~   73 (453)
T PRK09496         70 IAVT   73 (453)
T ss_pred             EEec
Confidence            7653

>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase

Probab=97.01  E-value=0.0053  Score=54.07  Aligned_cols=101  Identities=20%  Similarity=0.310  Sum_probs=60.0

Q ss_pred             CceEEEEecCCchhHHHHHHHHHHC-CCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHH-hhcCCC
Q 025786           69 GVTHVLVTGGAGYIGSHAALRLLKD-SYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKF-FSENAF  146 (248)
Q Consensus        69 ~~k~vlITGasg~IG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~~i  146 (248)
                      .+++|.|.||||++|.++++.|.++ +.+|..+.+.....+.    +....     ......|+.+.++++.. ++  ++
T Consensus        37 ~~~kVaIvGATG~vG~eLlrlL~~hP~~el~~l~s~~saG~~----i~~~~-----~~l~~~~~~~~~~~~~~~~~--~~  105 (381)
T PLN02968         37 EKKRIFVLGASGYTGAEVRRLLANHPDFEITVMTADRKAGQS----FGSVF-----PHLITQDLPNLVAVKDADFS--DV  105 (381)
T ss_pred             cccEEEEECCCChHHHHHHHHHHhCCCCeEEEEEChhhcCCC----chhhC-----ccccCccccceecCCHHHhc--CC
Confidence            4479999999999999999999999 6788887643221111    11110     01111233222222221 33  68


Q ss_pred             CEEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceec
Q 025786          147 DAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATY  200 (248)
Q Consensus       147 D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~  200 (248)
                      |++|-+.+..                  ....+++.+ +.+ .+||-.|+..-+
T Consensus       106 DvVf~Alp~~------------------~s~~i~~~~-~~g-~~VIDlSs~fRl  139 (381)
T PLN02968        106 DAVFCCLPHG------------------TTQEIIKAL-PKD-LKIVDLSADFRL  139 (381)
T ss_pred             CEEEEcCCHH------------------HHHHHHHHH-hCC-CEEEEcCchhcc
Confidence            9999866421                  355666776 343 578888886644

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=96.99  E-value=0.0074  Score=54.42  Aligned_cols=76  Identities=25%  Similarity=0.279  Sum_probs=53.6

Q ss_pred             CCceEEEEecC----------------CchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccC
Q 025786           68 EGVTHVLVTGG----------------AGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL  131 (248)
Q Consensus        68 ~~~k~vlITGa----------------sg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl  131 (248)
                      .| |+||||+|                ||-.|.+||+++..+|++|+++.-.. .          + ..+..+.++.  +
T Consensus       255 ~g-kkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~-~----------~-~~p~~v~~i~--V  319 (475)
T PRK13982        255 AG-RRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPV-D----------L-ADPQGVKVIH--V  319 (475)
T ss_pred             CC-CEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCc-C----------C-CCCCCceEEE--e
Confidence            45 89999987                68899999999999999999885211 1          0 1133455554  4


Q ss_pred             CCHHHHHHHhhc-CCCCEEEEccccccc
Q 025786          132 GDAKAVNKFFSE-NAFDAVMHFAAVAYV  158 (248)
Q Consensus       132 ~~~~~~~~~~~~-~~iD~li~~Ag~~~~  158 (248)
                      .+.+++.+.+.+ .+.|++|++|++...
T Consensus       320 ~ta~eM~~av~~~~~~Di~I~aAAVaDy  347 (475)
T PRK13982        320 ESARQMLAAVEAALPADIAIFAAAVADW  347 (475)
T ss_pred             cCHHHHHHHHHhhCCCCEEEEeccccce
Confidence            456666665544 347999999998643

>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent

Probab=96.97  E-value=0.019  Score=50.54  Aligned_cols=115  Identities=11%  Similarity=0.098  Sum_probs=68.8

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC-E----EEE--E--ecCCCCcchhhhhhhhhc-CCCCceEEEEccCCCHHHHHHH
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY-R----VTI--V--DNLSRGNIGAVKVLQELF-PEPGRLQFIYADLGDAKAVNKF  140 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~-~----V~~--~--~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~  140 (248)
                      -+|.|+|++|.+|.+++-.|+..|. .    |.+  +  +++....+.....+.+.. +...++.+ ..  .++++++  
T Consensus        45 ~KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~~v~i-~~--~~y~~~k--  119 (387)
T TIGR01757        45 VNVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLREVSI-GI--DPYEVFE--  119 (387)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcCceEE-ec--CCHHHhC--
Confidence            5899999999999999999998874 2    333  3  543333222222222211 11112221 11  2444433  


Q ss_pred             hhcCCCCEEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcC-C-CEEEEecc
Q 025786          141 FSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHG-V-DTLIYSST  196 (248)
Q Consensus       141 ~~~~~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~-~-~~iV~~SS  196 (248)
                          +.|++|-.||...  ....+..+.+..|......+.+.+.+.. . .+||.+|-
T Consensus       120 ----daDIVVitAG~pr--kpg~tR~dll~~N~~I~k~i~~~I~~~a~~~~iviVVsN  171 (387)
T TIGR01757       120 ----DADWALLIGAKPR--GPGMERADLLDINGQIFADQGKALNAVASKNCKVLVVGN  171 (387)
T ss_pred             ----CCCEEEECCCCCC--CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCC
Confidence                6799999999743  2234566777888888888888888843 3 34555553

This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.

>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional

Probab=96.92  E-value=0.012  Score=51.06  Aligned_cols=33  Identities=21%  Similarity=0.324  Sum_probs=27.5

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEE---EEEec
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRV---TIVDN  102 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V---~~~~r  102 (248)
                      |++|+|.||||++|+++++.|.++|+.+   ..+.+
T Consensus         1 ~~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s   36 (334)
T PRK14874          1 GYNVAVVGATGAVGREMLNILEERNFPVDKLRLLAS   36 (334)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEc
Confidence            4789999999999999999999988753   55543

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=96.90  E-value=0.0029  Score=53.74  Aligned_cols=76  Identities=17%  Similarity=0.211  Sum_probs=55.0

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li  150 (248)
                      ..++|-||+||.|.-++++|+.+|.+-.+.+|+..   ++......+.   .++..+  ++.+++.+++++.  +.++|+
T Consensus         7 ~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~---kl~~l~~~LG---~~~~~~--p~~~p~~~~~~~~--~~~VVl   76 (382)
T COG3268           7 YDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSA---KLDALRASLG---PEAAVF--PLGVPAALEAMAS--RTQVVL   76 (382)
T ss_pred             eeEEEEccccchhHHHHHHHHHcCCchhhccCCHH---HHHHHHHhcC---cccccc--CCCCHHHHHHHHh--cceEEE
Confidence            57999999999999999999999998877776443   3333333332   233333  3444778888776  689999


Q ss_pred             Eccccc
Q 025786          151 HFAAVA  156 (248)
Q Consensus       151 ~~Ag~~  156 (248)
                      ||+|..
T Consensus        77 ncvGPy   82 (382)
T COG3268          77 NCVGPY   82 (382)
T ss_pred             eccccc
Confidence            999964

>cd05295 MDH_like Malate dehydrogenase-like

Probab=96.89  E-value=0.018  Score=51.66  Aligned_cols=114  Identities=10%  Similarity=0.052  Sum_probs=68.2

Q ss_pred             eEEEEecCCchhHHHHHHHHHHC---C----CEEEEEecCCCCcchhhhh---hhhhc-CCCCceEEEEccCCCHHHHHH
Q 025786           71 THVLVTGGAGYIGSHAALRLLKD---S----YRVTIVDNLSRGNIGAVKV---LQELF-PEPGRLQFIYADLGDAKAVNK  139 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~---G----~~V~~~~r~~~~~~~~~~~---~~~~~-~~~~~~~~~~~Dl~~~~~~~~  139 (248)
                      -+|+||||+|.||.++.-.++.-   |    ..++++|.. ...+.+...   +++.. +....+.+. .  .++++   
T Consensus       124 ~~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~-~~~~~l~G~amDL~D~a~pll~~v~i~-~--~~~ea---  196 (452)
T cd05295         124 LQVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSP-ENLEKLKGLVMEVEDLAFPLLRGISVT-T--DLDVA---  196 (452)
T ss_pred             eEEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCC-CchhhHHHHHHHHHHhHHhhcCCcEEE-E--CCHHH---
Confidence            57999999999999999998762   3    234555641 122222222   22211 111123222 1  23333   


Q ss_pred             HhhcCCCCEEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCC--CEEEEecc
Q 025786          140 FFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV--DTLIYSST  196 (248)
Q Consensus       140 ~~~~~~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~--~~iV~~SS  196 (248)
                       ++  +.|++|-.||....  ...+-.+....|........+.+.+...  .+|+.+.|
T Consensus       197 -~~--daDvvIitag~prk--~G~~R~DLL~~N~~Ifk~~g~~I~~~a~~~~~VlVv~t  250 (452)
T cd05295         197 -FK--DAHVIVLLDDFLIK--EGEDLEGCIRSRVAICQLYGPLIEKNAKEDVKVIVAGR  250 (452)
T ss_pred             -hC--CCCEEEECCCCCCC--cCCCHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEeC
Confidence             33  68999999997422  2345567778888888888888887765  56666554

These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR00518 alaDH alanine dehydrogenase

Probab=96.86  E-value=0.023  Score=50.00  Aligned_cols=73  Identities=21%  Similarity=0.170  Sum_probs=50.7

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li  150 (248)
                      .+|+|.|+ |.+|...++.+...|++|++++++..+.   .+.....   + .  .+..+..+.+.+.+.+.  ..|+||
T Consensus       168 ~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~---~~l~~~~---g-~--~v~~~~~~~~~l~~~l~--~aDvVI  235 (370)
T TIGR00518       168 GDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRL---RQLDAEF---G-G--RIHTRYSNAYEIEDAVK--RADLLI  235 (370)
T ss_pred             ceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHH---HHHHHhc---C-c--eeEeccCCHHHHHHHHc--cCCEEE
Confidence            66889976 8999999999999999999998643221   1111111   1 1  12345567777877776  679999


Q ss_pred             Ecccc
Q 025786          151 HFAAV  155 (248)
Q Consensus       151 ~~Ag~  155 (248)
                      ++++.
T Consensus       236 ~a~~~  240 (370)
T TIGR00518       236 GAVLI  240 (370)
T ss_pred             Ecccc
Confidence            98865

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=96.86  E-value=0.0041  Score=53.33  Aligned_cols=33  Identities=21%  Similarity=0.191  Sum_probs=29.5

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNL  103 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~  103 (248)
                      .+|+|+||+|++|..+++.+...|++|++++++
T Consensus       140 ~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s  172 (325)
T TIGR02825       140 ETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGS  172 (325)
T ss_pred             CEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCC
Confidence            799999999999999998888889999887753

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=96.85  E-value=0.0029  Score=54.20  Aligned_cols=34  Identities=26%  Similarity=0.331  Sum_probs=30.6

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSR  105 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~  105 (248)
                      ++|.|.| +|.+|..++..|+++|++|++.+++..
T Consensus         3 ~~V~VIG-~G~mG~~iA~~la~~G~~V~v~d~~~~   36 (308)
T PRK06129          3 GSVAIIG-AGLIGRAWAIVFARAGHEVRLWDADPA   36 (308)
T ss_pred             cEEEEEC-ccHHHHHHHHHHHHCCCeeEEEeCCHH
Confidence            6799999 899999999999999999999997543

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=96.82  E-value=0.027  Score=48.66  Aligned_cols=74  Identities=24%  Similarity=0.204  Sum_probs=45.2

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCH---HHHHHHhhcCCCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDA---KAVNKFFSENAFD  147 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~---~~~~~~~~~~~iD  147 (248)
                      ++|||+||+|++|...++-+...|+.++++..++   ++.. .++++..   ..   ..|..+.   +.+.++....++|
T Consensus       144 ~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~---~k~~-~~~~lGA---d~---vi~y~~~~~~~~v~~~t~g~gvD  213 (326)
T COG0604         144 ETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSS---EKLE-LLKELGA---DH---VINYREEDFVEQVRELTGGKGVD  213 (326)
T ss_pred             CEEEEecCCchHHHHHHHHHHHcCCcEEEEecCH---HHHH-HHHhcCC---CE---EEcCCcccHHHHHHHHcCCCCce
Confidence            8999999999999999988888997666654222   2222 3343321   11   1223332   2233333323699


Q ss_pred             EEEEccc
Q 025786          148 AVMHFAA  154 (248)
Q Consensus       148 ~li~~Ag  154 (248)
                      +++..-|
T Consensus       214 vv~D~vG  220 (326)
T COG0604         214 VVLDTVG  220 (326)
T ss_pred             EEEECCC
Confidence            9998876

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=96.79  E-value=0.0037  Score=61.35  Aligned_cols=77  Identities=19%  Similarity=0.283  Sum_probs=55.8

Q ss_pred             CceEEEEecCCchhHHHHHHHHHHCC-CE-------------EEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCH
Q 025786           69 GVTHVLVTGGAGYIGSHAALRLLKDS-YR-------------VTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDA  134 (248)
Q Consensus        69 ~~k~vlITGasg~IG~~la~~L~~~G-~~-------------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~  134 (248)
                      .+|+|+|.|+ |.||+..++.|++.. ++             |+++|+...   .+.+..+..    .++..++.|++|.
T Consensus       568 ~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~---~a~~la~~~----~~~~~v~lDv~D~  639 (1042)
T PLN02819        568 KSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLK---DAKETVEGI----ENAEAVQLDVSDS  639 (1042)
T ss_pred             cCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHH---HHHHHHHhc----CCCceEEeecCCH
Confidence            3589999996 999999999998753 33             666664332   222222221    2567789999999


Q ss_pred             HHHHHHhhcCCCCEEEEcccc
Q 025786          135 KAVNKFFSENAFDAVMHFAAV  155 (248)
Q Consensus       135 ~~~~~~~~~~~iD~li~~Ag~  155 (248)
                      +++.++++  ++|+||++...
T Consensus       640 e~L~~~v~--~~DaVIsalP~  658 (1042)
T PLN02819        640 ESLLKYVS--QVDVVISLLPA  658 (1042)
T ss_pred             HHHHHhhc--CCCEEEECCCc
Confidence            99998887  48999998753

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=96.78  E-value=0.028  Score=45.89  Aligned_cols=79  Identities=27%  Similarity=0.365  Sum_probs=50.2

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC-EEEEEecCCCC-------------------cchhhhhhhhhcCCCCceEEEEcc
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRG-------------------NIGAVKVLQELFPEPGRLQFIYAD  130 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~-~V~~~~r~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~D  130 (248)
                      ++|+|.| .||+|.++++.|+..|. +++++|...-.                   .+.+.+.++++.+ ..++..+..+
T Consensus        22 ~~VlivG-~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np-~~~i~~~~~~   99 (228)
T cd00757          22 ARVLVVG-AGGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINP-DVEIEAYNER   99 (228)
T ss_pred             CcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCC-CCEEEEecce
Confidence            7899998 79999999999999997 77777632111                   0111222223321 1245566666


Q ss_pred             CCCHHHHHHHhhcCCCCEEEEccc
Q 025786          131 LGDAKAVNKFFSENAFDAVMHFAA  154 (248)
Q Consensus       131 l~~~~~~~~~~~~~~iD~li~~Ag  154 (248)
                      + +.+.+.++++  ++|+||.+..
T Consensus       100 i-~~~~~~~~~~--~~DvVi~~~d  120 (228)
T cd00757         100 L-DAENAEELIA--GYDLVLDCTD  120 (228)
T ss_pred             e-CHHHHHHHHh--CCCEEEEcCC
Confidence            6 3456666666  5899998753

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=96.72  E-value=0.0012  Score=52.87  Aligned_cols=32  Identities=28%  Similarity=0.372  Sum_probs=29.2

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNL  103 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~  103 (248)
                      |+++|+|. |.+|+++++.|.+.|++|++.+++
T Consensus        29 k~v~I~G~-G~vG~~~A~~L~~~G~~Vvv~D~~   60 (200)
T cd01075          29 KTVAVQGL-GKVGYKLAEHLLEEGAKLIVADIN   60 (200)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCC
Confidence            89999997 689999999999999999988754

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=96.68  E-value=0.0051  Score=51.90  Aligned_cols=74  Identities=16%  Similarity=0.191  Sum_probs=47.5

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHH---HHHHHhhcCCCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAK---AVNKFFSENAFD  147 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~---~~~~~~~~~~iD  147 (248)
                      ++++|+|++|++|..++..+...|++|+++++...+    .+.++++.   ...   ..|..+.+   .+.+.....++|
T Consensus       141 ~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~----~~~~~~~g---~~~---~~~~~~~~~~~~~~~~~~~~~~d  210 (323)
T cd05276         141 ETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEK----LEACRALG---ADV---AINYRTEDFAEEVKEATGGRGVD  210 (323)
T ss_pred             CEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHH----HHHHHHcC---CCE---EEeCCchhHHHHHHHHhCCCCeE
Confidence            799999999999999999999999999888753221    12222221   111   12333322   233333334699


Q ss_pred             EEEEccc
Q 025786          148 AVMHFAA  154 (248)
Q Consensus       148 ~li~~Ag  154 (248)
                      ++++++|
T Consensus       211 ~vi~~~g  217 (323)
T cd05276         211 VILDMVG  217 (323)
T ss_pred             EEEECCc
Confidence            9999987

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=96.66  E-value=0.055  Score=44.78  Aligned_cols=78  Identities=24%  Similarity=0.269  Sum_probs=49.6

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC-EEEEEecCCCCcch-------------------hhhhhhhhcCCCCceEEEEcc
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIG-------------------AVKVLQELFPEPGRLQFIYAD  130 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~-~V~~~~r~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~D  130 (248)
                      ++|+|.|+ ||+|.++++.|+..|. +++++|...-....                   +.+.++++.+ ..++..+...
T Consensus        33 ~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp-~v~i~~~~~~  110 (245)
T PRK05690         33 ARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARINP-HIAIETINAR  110 (245)
T ss_pred             CeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHCC-CCEEEEEecc
Confidence            78999987 9999999999999997 78888743211111                   1122233322 2345555555


Q ss_pred             CCCHHHHHHHhhcCCCCEEEEcc
Q 025786          131 LGDAKAVNKFFSENAFDAVMHFA  153 (248)
Q Consensus       131 l~~~~~~~~~~~~~~iD~li~~A  153 (248)
                      ++ .+.+.++++  ++|+||.+.
T Consensus       111 i~-~~~~~~~~~--~~DiVi~~~  130 (245)
T PRK05690        111 LD-DDELAALIA--GHDLVLDCT  130 (245)
T ss_pred             CC-HHHHHHHHh--cCCEEEecC
Confidence            54 345566666  579998764

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=96.63  E-value=0.0036  Score=52.96  Aligned_cols=72  Identities=24%  Similarity=0.229  Sum_probs=45.4

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC-EEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~l  149 (248)
                      ++|+|.| +||.|++++..|+..|. +|++++|+..+.+.+.+.+....   ....+...     +++.+.+.  +.|+|
T Consensus       128 k~vlIlG-aGGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~---~~~~~~~~-----~~~~~~~~--~aDiV  196 (284)
T PRK12549        128 ERVVQLG-AGGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARF---PAARATAG-----SDLAAALA--AADGL  196 (284)
T ss_pred             CEEEEEC-CcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhC---CCeEEEec-----cchHhhhC--CCCEE
Confidence            7899999 58899999999999998 79999876544433333222211   11222221     22223333  57999


Q ss_pred             EEcc
Q 025786          150 MHFA  153 (248)
Q Consensus       150 i~~A  153 (248)
                      ||+.
T Consensus       197 InaT  200 (284)
T PRK12549        197 VHAT  200 (284)
T ss_pred             EECC
Confidence            9994

>cd08293 PTGR2 Prostaglandin reductase

Probab=96.60  E-value=0.012  Score=50.71  Aligned_cols=32  Identities=28%  Similarity=0.186  Sum_probs=28.7

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC-EEEEEec
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDN  102 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~-~V~~~~r  102 (248)
                      .+|+|+||+|++|..+++.+...|+ +|+++++
T Consensus       156 ~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~  188 (345)
T cd08293         156 QTMVVSGAAGACGSLAGQIGRLLGCSRVVGICG  188 (345)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcC
Confidence            7999999999999999988888898 7988764

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=96.59  E-value=0.013  Score=49.70  Aligned_cols=80  Identities=13%  Similarity=0.127  Sum_probs=47.2

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC-EEEEEecCCCCcchhhhhhhhhcCCC-CceEEEEccCCCHHHHHHHhhcCCCCE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEP-GRLQFIYADLGDAKAVNKFFSENAFDA  148 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~iD~  148 (248)
                      ++++|.|+ ||-+++++..|+..|. +|++++|+....+++.+..+.+.... ..+.+  .++.+.+.+.+.+.  +.|+
T Consensus       125 k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~~~~--~~~~~~~~l~~~~~--~aDi  199 (288)
T PRK12749        125 KTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTV--TDLADQQAFAEALA--SADI  199 (288)
T ss_pred             CEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhccCceEEE--echhhhhhhhhhcc--cCCE
Confidence            78999995 7789999999999997 78898876432233333333331111 11222  22222222333332  5799


Q ss_pred             EEEcccc
Q 025786          149 VMHFAAV  155 (248)
Q Consensus       149 li~~Ag~  155 (248)
                      |||+-.+
T Consensus       200 vINaTp~  206 (288)
T PRK12749        200 LTNGTKV  206 (288)
T ss_pred             EEECCCC
Confidence            9997654

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=96.56  E-value=0.0079  Score=51.40  Aligned_cols=33  Identities=24%  Similarity=0.236  Sum_probs=29.6

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNL  103 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~  103 (248)
                      .+++|+||+|++|..+++.+...|++|++++++
T Consensus       145 ~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s  177 (329)
T cd08294         145 ETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGS  177 (329)
T ss_pred             CEEEEecCccHHHHHHHHHHHHcCCEEEEEeCC
Confidence            799999999999999988888899999887743

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated

Probab=96.55  E-value=0.018  Score=50.06  Aligned_cols=33  Identities=24%  Similarity=0.421  Sum_probs=28.4

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHC-CCEEEEEec
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKD-SYRVTIVDN  102 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~-G~~V~~~~r  102 (248)
                      |++|.|.||||.+|+++++.|.+. +++++.+.+
T Consensus         2 m~kVaIiGAtG~vG~~l~~~L~~~p~~elv~v~~   35 (343)
T PRK00436          2 MIKVGIVGASGYTGGELLRLLLNHPEVEIVAVTS   35 (343)
T ss_pred             CeEEEEECCCCHHHHHHHHHHHcCCCceEEEEEC
Confidence            479999999999999999999987 678776654

>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent

Probab=96.54  E-value=0.083  Score=45.20  Aligned_cols=115  Identities=13%  Similarity=0.140  Sum_probs=64.7

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC-EEEEEecCCCCcchh-hhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGA-VKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~  148 (248)
                      ++|.|.|+ |.+|..++..|+.+|. +|+++|......... .+..+......... .+.. -+|.+++    +  +.|+
T Consensus         2 ~KV~VIGa-G~vG~~iA~~la~~g~~~VvlvDi~~~l~~g~a~d~~~~~~~~~~~~-~i~~-t~d~~~~----~--~aDi   72 (305)
T TIGR01763         2 KKISVIGA-GFVGATTAFRLAEKELADLVLLDVVEGIPQGKALDMYEASPVGGFDT-KVTG-TNNYADT----A--NSDI   72 (305)
T ss_pred             CEEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCCChhHHHHHhhhhhhhccCCCc-EEEe-cCCHHHh----C--CCCE
Confidence            57889996 9999999999999886 899999643221111 00111000000011 1111 1233332    2  5799


Q ss_pred             EEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCC-CEEEEecc
Q 025786          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV-DTLIYSST  196 (248)
Q Consensus       149 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~-~~iV~~SS  196 (248)
                      +|-+||....  ...+..+.+..|......+.+.+.+... ..||.+|.
T Consensus        73 VIitag~p~~--~~~sR~~l~~~N~~iv~~i~~~I~~~~p~~~iIv~tN  119 (305)
T TIGR01763        73 VVITAGLPRK--PGMSREDLLSMNAGIVREVTGRIMEHSPNPIIVVVSN  119 (305)
T ss_pred             EEEcCCCCCC--cCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence            9999996432  1233445566676667777777766543 34555554

The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable.

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=96.53  E-value=0.0062  Score=51.60  Aligned_cols=66  Identities=20%  Similarity=0.194  Sum_probs=45.1

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li  150 (248)
                      ++++|.|. |.+|+.+++.|...|++|++.+|+...   ... ..+.     ....+     +.+++.+.++  +.|+||
T Consensus       152 k~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~---~~~-~~~~-----g~~~~-----~~~~l~~~l~--~aDiVi  214 (287)
T TIGR02853       152 SNVMVLGF-GRTGMTIARTFSALGARVFVGARSSAD---LAR-ITEM-----GLIPF-----PLNKLEEKVA--EIDIVI  214 (287)
T ss_pred             CEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHH---HHH-HHHC-----CCeee-----cHHHHHHHhc--cCCEEE
Confidence            89999996 889999999999999999998864322   111 1111     11111     2345556665  579999


Q ss_pred             Ecc
Q 025786          151 HFA  153 (248)
Q Consensus       151 ~~A  153 (248)
                      |+.
T Consensus       215 nt~  217 (287)
T TIGR02853       215 NTI  217 (287)
T ss_pred             ECC
Confidence            976

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.51  E-value=0.052  Score=47.47  Aligned_cols=78  Identities=22%  Similarity=0.213  Sum_probs=50.0

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC-EEEEEecCCCC-------------------cchhhhhhhhhcCCCCceEEEEcc
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRG-------------------NIGAVKVLQELFPEPGRLQFIYAD  130 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~-~V~~~~r~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~D  130 (248)
                      .+|+|.|+ ||+|.++++.|+..|. +++++|...-.                   .+.+.+.++++.+ ..+++.+...
T Consensus        29 ~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np-~v~v~~~~~~  106 (355)
T PRK05597         29 AKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNP-DVKVTVSVRR  106 (355)
T ss_pred             CeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCC-CcEEEEEEee
Confidence            78999985 9999999999999997 78888753211                   1111222333322 2345556566


Q ss_pred             CCCHHHHHHHhhcCCCCEEEEcc
Q 025786          131 LGDAKAVNKFFSENAFDAVMHFA  153 (248)
Q Consensus       131 l~~~~~~~~~~~~~~iD~li~~A  153 (248)
                      ++. +...++++  +.|+||.+.
T Consensus       107 i~~-~~~~~~~~--~~DvVvd~~  126 (355)
T PRK05597        107 LTW-SNALDELR--DADVILDGS  126 (355)
T ss_pred             cCH-HHHHHHHh--CCCEEEECC
Confidence            653 45556665  579999765

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=96.49  E-value=0.066  Score=43.28  Aligned_cols=77  Identities=21%  Similarity=0.276  Sum_probs=48.1

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC-EEEEEecCCCCc------------------chhhhhhhhhcCCCCceEEEEccC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGN------------------IGAVKVLQELFPEPGRLQFIYADL  131 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~-~V~~~~r~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~Dl  131 (248)
                      .+|+|.| .|++|.++++.|+..|. +++++|...-..                  +.+.+.++++.+ ..+++.+...+
T Consensus        29 ~~V~ViG-~GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~lnp-~v~v~~~~~~i  106 (212)
T PRK08644         29 AKVGIAG-AGGLGSNIAVALARSGVGNLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEINP-FVEIEAHNEKI  106 (212)
T ss_pred             CCEEEEC-cCHHHHHHHHHHHHcCCCeEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHHCC-CCEEEEEeeec
Confidence            7899998 59999999999999998 588888541110                  011112222221 23455555555


Q ss_pred             CCHHHHHHHhhcCCCCEEEEc
Q 025786          132 GDAKAVNKFFSENAFDAVMHF  152 (248)
Q Consensus       132 ~~~~~~~~~~~~~~iD~li~~  152 (248)
                      ++ +.+.++++  ++|+||.+
T Consensus       107 ~~-~~~~~~~~--~~DvVI~a  124 (212)
T PRK08644        107 DE-DNIEELFK--DCDIVVEA  124 (212)
T ss_pred             CH-HHHHHHHc--CCCEEEEC
Confidence            44 45556665  57888876

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=96.49  E-value=0.011  Score=53.14  Aligned_cols=74  Identities=24%  Similarity=0.293  Sum_probs=53.4

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~l  149 (248)
                      +++++|.|+ |.+|+.+++.|.+.|++|+++++++..    .+.+.+.   ...+.++.+|.++.+.++++-- .+.|.+
T Consensus       231 ~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~----~~~~~~~---~~~~~~i~gd~~~~~~L~~~~~-~~a~~v  301 (453)
T PRK09496        231 VKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPER----AEELAEE---LPNTLVLHGDGTDQELLEEEGI-DEADAF  301 (453)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHH----HHHHHHH---CCCCeEEECCCCCHHHHHhcCC-ccCCEE
Confidence            388999997 999999999999999999999854322    1112211   2346778999999988865443 257888


Q ss_pred             EEc
Q 025786          150 MHF  152 (248)
Q Consensus       150 i~~  152 (248)
                      |-+
T Consensus       302 i~~  304 (453)
T PRK09496        302 IAL  304 (453)
T ss_pred             EEC
Confidence            744

>cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins

Probab=96.48  E-value=0.074  Score=45.34  Aligned_cols=112  Identities=14%  Similarity=0.154  Sum_probs=62.6

Q ss_pred             EEEecCCchhHHHHHHHHHHCCC-EEEEEecCCCCcchhhhhhhhhcC-CCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 025786           73 VLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFP-EPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (248)
Q Consensus        73 vlITGasg~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li  150 (248)
                      |.|.|+ |.+|..++..|+.+|. +|+++|++..........+.+... ...... +... +|.++    ++  +.|+||
T Consensus         1 I~IIGa-G~vG~~ia~~la~~~l~eV~L~Di~e~~~~g~~~dl~~~~~~~~~~~~-I~~t-~d~~~----l~--dADiVI   71 (300)
T cd01339           1 ISIIGA-GNVGATLAQLLALKELGDVVLLDIVEGLPQGKALDISQAAPILGSDTK-VTGT-NDYED----IA--GSDVVV   71 (300)
T ss_pred             CEEECC-CHHHHHHHHHHHhCCCcEEEEEeCCCcHHHHHHHHHHHhhhhcCCCeE-EEEc-CCHHH----hC--CCCEEE
Confidence            468897 9999999999998876 999999764322111111111111 011111 1111 23332    33  679999


Q ss_pred             EcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCC-EEEEec
Q 025786          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD-TLIYSS  195 (248)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~-~iV~~S  195 (248)
                      .++|....  ...+..+....|......+++.+.+.... .+|++|
T Consensus        72 it~g~p~~--~~~~r~e~~~~n~~i~~~i~~~i~~~~p~~~iIv~s  115 (300)
T cd01339          72 ITAGIPRK--PGMSRDDLLGTNAKIVKEVAENIKKYAPNAIVIVVT  115 (300)
T ss_pred             EecCCCCC--cCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            99986422  12233345556666666777777776544 444444

Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=96.46  E-value=0.082  Score=39.69  Aligned_cols=31  Identities=35%  Similarity=0.534  Sum_probs=26.6

Q ss_pred             EEEEecCCchhHHHHHHHHHHCCC-EEEEEecC
Q 025786           72 HVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNL  103 (248)
Q Consensus        72 ~vlITGasg~IG~~la~~L~~~G~-~V~~~~r~  103 (248)
                      +|+|.|+ |++|.++++.|+..|. +++++|..
T Consensus         1 ~VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d   32 (143)
T cd01483           1 RVLLVGL-GGLGSEIALNLARSGVGKITLIDFD   32 (143)
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCCEEEEEcCC
Confidence            4788885 9999999999999998 78888743

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=96.46  E-value=0.0085  Score=51.15  Aligned_cols=33  Identities=36%  Similarity=0.342  Sum_probs=30.4

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNL  103 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~  103 (248)
                      .+++|+||+|.+|.++++.+...|++|+++.++
T Consensus       164 ~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~  196 (332)
T cd08259         164 DTVLVTGAGGGVGIHAIQLAKALGARVIAVTRS  196 (332)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCC
Confidence            789999999999999999999999999888753

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=96.46  E-value=0.012  Score=42.36  Aligned_cols=69  Identities=29%  Similarity=0.401  Sum_probs=47.3

Q ss_pred             EEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEEEc
Q 025786           73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVMHF  152 (248)
Q Consensus        73 vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li~~  152 (248)
                      |+|.|. |-+|+.+++.|.+.+.+|+++++.+..    .+...+     ..+.++.+|.++++.++++--+ +.|.+|-.
T Consensus         1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~----~~~~~~-----~~~~~i~gd~~~~~~l~~a~i~-~a~~vv~~   69 (116)
T PF02254_consen    1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPER----VEELRE-----EGVEVIYGDATDPEVLERAGIE-KADAVVIL   69 (116)
T ss_dssp             EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHH----HHHHHH-----TTSEEEES-TTSHHHHHHTTGG-CESEEEEE
T ss_pred             eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHH----HHHHHh-----cccccccccchhhhHHhhcCcc-ccCEEEEc
Confidence            567775 689999999999987799999853221    122221     1377899999999988876432 56777644

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=96.44  E-value=0.017  Score=45.11  Aligned_cols=76  Identities=22%  Similarity=0.308  Sum_probs=46.8

Q ss_pred             EEEEecCCchhHHHHHHHHHHCCC-EEEEEecCCCCcc------------------hhhhhhhhhcCCCCceEEEEccCC
Q 025786           72 HVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNI------------------GAVKVLQELFPEPGRLQFIYADLG  132 (248)
Q Consensus        72 ~vlITGasg~IG~~la~~L~~~G~-~V~~~~r~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~Dl~  132 (248)
                      +|+|.| .|++|.++++.|+..|. +++++|...-...                  .+.+.++++.+ ..++..+...++
T Consensus         1 ~VlViG-~GglGs~ia~~La~~Gvg~i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~lnp-~v~i~~~~~~~~   78 (174)
T cd01487           1 KVGIAG-AGGLGSNIAVLLARSGVGNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREINP-FVKIEAINIKID   78 (174)
T ss_pred             CEEEEC-cCHHHHHHHHHHHHcCCCeEEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHHHHCC-CCEEEEEEeecC
Confidence            478888 59999999999999998 5999885421100                  11112222221 234555555554


Q ss_pred             CHHHHHHHhhcCCCCEEEEc
Q 025786          133 DAKAVNKFFSENAFDAVMHF  152 (248)
Q Consensus       133 ~~~~~~~~~~~~~iD~li~~  152 (248)
                      . +.+.++++  ++|+||.+
T Consensus        79 ~-~~~~~~l~--~~DlVi~~   95 (174)
T cd01487          79 E-NNLEGLFG--DCDIVVEA   95 (174)
T ss_pred             h-hhHHHHhc--CCCEEEEC
Confidence            3 45666665  57888876

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=96.43  E-value=0.013  Score=50.47  Aligned_cols=33  Identities=15%  Similarity=0.106  Sum_probs=29.7

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNL  103 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~  103 (248)
                      .+++|+||+|++|..+++.+...|++|++++++
T Consensus       153 ~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~  185 (338)
T cd08295         153 ETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGS  185 (338)
T ss_pred             CEEEEecCccHHHHHHHHHHHHcCCEEEEEeCC
Confidence            899999999999999998888899999887753

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=96.36  E-value=0.06  Score=39.55  Aligned_cols=32  Identities=22%  Similarity=0.387  Sum_probs=27.4

Q ss_pred             eEEEEecCCchhHHHHHHHHHH-CCCEEEEE-ec
Q 025786           71 THVLVTGGAGYIGSHAALRLLK-DSYRVTIV-DN  102 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~-~G~~V~~~-~r  102 (248)
                      ++|.|.|++|-+|+.+++.+.+ .|.+++.. ++
T Consensus         1 mrV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~   34 (124)
T PF01113_consen    1 MRVGIVGASGRMGRAIAEAILESPGFELVGAVDR   34 (124)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHSTTEEEEEEEET
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCcEEEEEEec
Confidence            5799999999999999999999 67887654 44

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A

Probab=96.35  E-value=0.0094  Score=39.39  Aligned_cols=31  Identities=23%  Similarity=0.134  Sum_probs=22.0

Q ss_pred             ceEEEEecCCchhHHH--HHHHHHHCCCEEEEEe
Q 025786           70 VTHVLVTGGAGYIGSH--AALRLLKDSYRVTIVD  101 (248)
Q Consensus        70 ~k~vlITGasg~IG~~--la~~L~~~G~~V~~~~  101 (248)
                      .|+|||+|+|+|.|.+  ++..+ ..|++.+.+.
T Consensus        39 pK~VLViGaStGyGLAsRIa~aF-g~gA~TiGV~   71 (78)
T PF12242_consen   39 PKKVLVIGASTGYGLASRIAAAF-GAGADTIGVS   71 (78)
T ss_dssp             -SEEEEES-SSHHHHHHHHHHHH-CC--EEEEEE
T ss_pred             CceEEEEecCCcccHHHHHHHHh-cCCCCEEEEe
Confidence            4899999999999999  55555 6677877765

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=96.35  E-value=0.011  Score=52.77  Aligned_cols=70  Identities=13%  Similarity=0.155  Sum_probs=46.9

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC-EEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~l  149 (248)
                      ++|+|.|+ |++|+.+++.|...|+ +|+++.|+..+   +.+..+++.    ...     +...+++.+.+.  ..|+|
T Consensus       182 kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~r---a~~La~~~~----~~~-----~~~~~~l~~~l~--~aDiV  246 (414)
T PRK13940        182 KNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEK---AQKITSAFR----NAS-----AHYLSELPQLIK--KADII  246 (414)
T ss_pred             CEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHH---HHHHHHHhc----CCe-----EecHHHHHHHhc--cCCEE
Confidence            89999996 9999999999999996 68887764332   223222221    111     223345556665  57999


Q ss_pred             EEcccc
Q 025786          150 MHFAAV  155 (248)
Q Consensus       150 i~~Ag~  155 (248)
                      |++.+.
T Consensus       247 I~aT~a  252 (414)
T PRK13940        247 IAAVNV  252 (414)
T ss_pred             EECcCC
Confidence            998875

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=96.29  E-value=0.12  Score=41.20  Aligned_cols=109  Identities=24%  Similarity=0.351  Sum_probs=61.8

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC-EEEEEecCCCCcch---------------------hhhhhhhhcCCCCceEEEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIG---------------------AVKVLQELFPEPGRLQFIY  128 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~-~V~~~~r~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~  128 (248)
                      .+|+|.|+ ||+|.++++.|+..|. +++++|...-....                     +.+.++++.+ ..+++.+.
T Consensus        20 s~VlviG~-gglGsevak~L~~~GVg~i~lvD~d~ve~snl~rq~~~~~~~~~iG~~Ka~~~~~~L~~lNp-~v~i~~~~   97 (198)
T cd01485          20 AKVLIIGA-GALGAEIAKNLVLAGIDSITIVDHRLVSTEDLGSNFFLDAEVSNSGMNRAAASYEFLQELNP-NVKLSIVE   97 (198)
T ss_pred             CcEEEECC-CHHHHHHHHHHHHcCCCEEEEEECCcCChhcCcccEecccchhhcCchHHHHHHHHHHHHCC-CCEEEEEe
Confidence            68899875 5599999999999997 58888743111000                     1112233322 22455555


Q ss_pred             ccCCC-HHHHHHHhhcCCCCEEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecC
Q 025786          129 ADLGD-AKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYG  201 (248)
Q Consensus       129 ~Dl~~-~~~~~~~~~~~~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g  201 (248)
                      .++.+ .+...+++.  .+|+||.+-.         +        ......+-+.+.+.+. .+|+.++.+.+|
T Consensus        98 ~~~~~~~~~~~~~~~--~~dvVi~~~d---------~--------~~~~~~ln~~c~~~~i-p~i~~~~~G~~G  151 (198)
T cd01485          98 EDSLSNDSNIEEYLQ--KFTLVIATEE---------N--------YERTAKVNDVCRKHHI-PFISCATYGLIG  151 (198)
T ss_pred             cccccchhhHHHHHh--CCCEEEECCC---------C--------HHHHHHHHHHHHHcCC-CEEEEEeecCEE
Confidence            55542 344555665  5788885421         0        1112234456666664 577777766555

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.29  E-value=0.023  Score=44.20  Aligned_cols=32  Identities=28%  Similarity=0.413  Sum_probs=29.2

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEec
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDN  102 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r  102 (248)
                      ++|+|.|++..+|..+++.|.++|++|+++.|
T Consensus        45 k~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r   76 (168)
T cd01080          45 KKVVVVGRSNIVGKPLAALLLNRNATVTVCHS   76 (168)
T ss_pred             CEEEEECCcHHHHHHHHHHHhhCCCEEEEEEC
Confidence            99999999777899999999999999988875

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=96.28  E-value=0.036  Score=48.34  Aligned_cols=34  Identities=21%  Similarity=0.297  Sum_probs=28.4

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCC-EEEEEecC
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNL  103 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~-~V~~~~r~  103 (248)
                      +++|.|+||||++|+++++.|.++.. +++.+.++
T Consensus         3 ~~~V~I~GatG~iG~~l~~~L~~~p~~el~~~~~s   37 (349)
T PRK08664          3 KLKVGILGATGMVGQRFVQLLANHPWFEVTALAAS   37 (349)
T ss_pred             CcEEEEECCCCHHHHHHHHHHHcCCCceEEEEEcC
Confidence            37899999999999999999998754 88877433

>TIGR01771 L-LDH-NAD L-lactate dehydrogenase

Probab=96.28  E-value=0.14  Score=43.61  Aligned_cols=109  Identities=19%  Similarity=0.240  Sum_probs=66.5

Q ss_pred             ecCCchhHHHHHHHHHHCCC--EEEEEecCCCCcchhhhhhhhhcC-CCCceEEEEccCCCHHHHHHHhhcCCCCEEEEc
Q 025786           76 TGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELFP-EPGRLQFIYADLGDAKAVNKFFSENAFDAVMHF  152 (248)
Q Consensus        76 TGasg~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li~~  152 (248)
                      .| +|.+|..++..|+..+.  +++++|......+.....+..... ...++.+. .  .++++++      +.|+||-.
T Consensus         2 IG-aG~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~i~-~--~~~~~~~------daDivVit   71 (299)
T TIGR01771         2 IG-AGNVGSSTAFALLNQGIADEIVLIDINKDKAEGEAMDLQHAASFLPTPKKIR-S--GDYSDCK------DADLVVIT   71 (299)
T ss_pred             CC-cCHHHHHHHHHHHhcCCCCEEEEEeCCCChhhHHHHHHHHhhcccCCCeEEe-c--CCHHHHC------CCCEEEEC
Confidence            45 59999999999998874  789998654333322222222211 11223222 2  3454443      57999999


Q ss_pred             ccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCC-EEEEecc
Q 025786          153 AAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD-TLIYSST  196 (248)
Q Consensus       153 Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~-~iV~~SS  196 (248)
                      ||....  ...+..+.+..|......+.+.+.+.+.. .++.+|.
T Consensus        72 ag~~rk--~g~~R~dll~~N~~i~~~~~~~i~~~~p~~~vivvsN  114 (299)
T TIGR01771        72 AGAPQK--PGETRLELVGRNVRIMKSIVPEVVKSGFDGIFLVATN  114 (299)
T ss_pred             CCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeCC
Confidence            997432  23345677788888788888888776643 4555553

This model represents the NAD-dependent L-lactate dehydrogenases from bacteria and eukaryotes. This enzyme function as as the final step in anaerobic glycolysis. Although lactate dehydrogenases have in some cases been mistaken for malate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of malate dehydrogenases.

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=96.27  E-value=0.011  Score=50.02  Aligned_cols=75  Identities=15%  Similarity=0.057  Sum_probs=46.1

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC-EEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~l  149 (248)
                      ++++|.| +||.|++++..|++.|+ +|+++.|+..+.+++   .+.+.. ...+  ..  +...+++...+.  ..|+|
T Consensus       126 k~vlvlG-aGGaarai~~aL~~~G~~~i~I~nRt~~ka~~L---a~~~~~-~~~~--~~--~~~~~~~~~~~~--~~DiV  194 (282)
T TIGR01809       126 FRGLVIG-AGGTSRAAVYALASLGVTDITVINRNPDKLSRL---VDLGVQ-VGVI--TR--LEGDSGGLAIEK--AAEVL  194 (282)
T ss_pred             ceEEEEc-CcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH---HHHhhh-cCcc--ee--ccchhhhhhccc--CCCEE
Confidence            7899997 59999999999999997 799988754433332   222211 1111  11  111123333332  57999


Q ss_pred             EEccccc
Q 025786          150 MHFAAVA  156 (248)
Q Consensus       150 i~~Ag~~  156 (248)
                      ||+....
T Consensus       195 InaTp~g  201 (282)
T TIGR01809       195 VSTVPAD  201 (282)
T ss_pred             EECCCCC
Confidence            9997654

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=96.24  E-value=0.12  Score=42.67  Aligned_cols=32  Identities=28%  Similarity=0.393  Sum_probs=27.7

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC-EEEEEecC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNL  103 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~-~V~~~~r~  103 (248)
                      .+|+|.| .||+|.++++.|+..|. +++++|..
T Consensus        25 ~~VlvvG-~GglGs~va~~La~~Gvg~i~lvD~D   57 (240)
T TIGR02355        25 SRVLIVG-LGGLGCAASQYLAAAGVGNLTLLDFD   57 (240)
T ss_pred             CcEEEEC-cCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            7899997 69999999999999996 78888753

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>PRK08328 hypothetical protein; Provisional

Probab=96.21  E-value=0.11  Score=42.65  Aligned_cols=31  Identities=32%  Similarity=0.503  Sum_probs=27.3

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC-EEEEEec
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDN  102 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~-~V~~~~r  102 (248)
                      .+|+|.| .||+|.++++.|+..|. +++++|.
T Consensus        28 ~~VlIiG-~GGlGs~ia~~La~~Gvg~i~lvD~   59 (231)
T PRK08328         28 AKVAVVG-VGGLGSPVAYYLAAAGVGRILLIDE   59 (231)
T ss_pred             CcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcC
Confidence            7899998 68999999999999997 7888874

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=96.21  E-value=0.0071  Score=49.09  Aligned_cols=36  Identities=31%  Similarity=0.367  Sum_probs=31.5

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRG  106 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~  106 (248)
                      |+|.|.||+|.+|..++..|++.|++|++.+|+..+
T Consensus         1 MkI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~   36 (219)
T TIGR01915         1 MKIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEK   36 (219)
T ss_pred             CEEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHH
Confidence            469999999999999999999999999998875433

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=96.20  E-value=0.013  Score=49.85  Aligned_cols=66  Identities=21%  Similarity=0.185  Sum_probs=45.2

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li  150 (248)
                      ++++|.|. |.+|+.++..|...|++|++++|+...    .+..+..     ...++     ..+++.+.+.  +.|+||
T Consensus       153 ~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~----~~~~~~~-----G~~~~-----~~~~l~~~l~--~aDiVI  215 (296)
T PRK08306        153 SNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAH----LARITEM-----GLSPF-----HLSELAEEVG--KIDIIF  215 (296)
T ss_pred             CEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHH----HHHHHHc-----CCeee-----cHHHHHHHhC--CCCEEE
Confidence            89999995 889999999999999999999875321    1111111     12222     2345555555  689999


Q ss_pred             Ecc
Q 025786          151 HFA  153 (248)
Q Consensus       151 ~~A  153 (248)
                      ++.
T Consensus       216 ~t~  218 (296)
T PRK08306        216 NTI  218 (296)
T ss_pred             ECC
Confidence            975

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=96.20  E-value=0.036  Score=48.18  Aligned_cols=32  Identities=16%  Similarity=0.132  Sum_probs=29.0

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEec
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDN  102 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r  102 (248)
                      .+|+|+|++|++|..+++.+...|++|+++++
T Consensus       160 ~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~  191 (348)
T PLN03154        160 DSVFVSAASGAVGQLVGQLAKLHGCYVVGSAG  191 (348)
T ss_pred             CEEEEecCccHHHHHHHHHHHHcCCEEEEEcC
Confidence            89999999999999999888888999988764

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=96.18  E-value=0.014  Score=49.34  Aligned_cols=77  Identities=17%  Similarity=0.273  Sum_probs=46.1

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC-EEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~l  149 (248)
                      ++++|.|+ ||.|++++-.|++.|+ +|++++|+..+.+++.   +.+....+.......|.   .++.+...  ..|+|
T Consensus       128 k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La---~~~~~~~~~~~~~~~~~---~~~~~~~~--~~div  198 (283)
T PRK14027        128 DSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALA---DVINNAVGREAVVGVDA---RGIEDVIA--AADGV  198 (283)
T ss_pred             CeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHH---HHHhhccCcceEEecCH---hHHHHHHh--hcCEE
Confidence            78999995 9999999999999997 6888887544433332   22211111111111232   22222233  57999


Q ss_pred             EEccccc
Q 025786          150 MHFAAVA  156 (248)
Q Consensus       150 i~~Ag~~  156 (248)
                      ||+-.+.
T Consensus       199 INaTp~G  205 (283)
T PRK14027        199 VNATPMG  205 (283)
T ss_pred             EEcCCCC
Confidence            9987653

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=96.16  E-value=0.014  Score=49.28  Aligned_cols=75  Identities=23%  Similarity=0.306  Sum_probs=48.1

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC-EEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~l  149 (248)
                      ++++|.| +||.+++++.+|++.|. +|+++.|+..+.+++.+...+..   ..+..  .+..+.+...      ..|+|
T Consensus       127 ~~vlilG-AGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~---~~~~~--~~~~~~~~~~------~~dli  194 (283)
T COG0169         127 KRVLILG-AGGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELG---AAVEA--AALADLEGLE------EADLL  194 (283)
T ss_pred             CEEEEEC-CcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhcc---ccccc--cccccccccc------ccCEE
Confidence            8899998 69999999999999995 79999876555544444333221   11111  2222222111      36999


Q ss_pred             EEcccccc
Q 025786          150 MHFAAVAY  157 (248)
Q Consensus       150 i~~Ag~~~  157 (248)
                      ||+-....
T Consensus       195 INaTp~Gm  202 (283)
T COG0169         195 INATPVGM  202 (283)
T ss_pred             EECCCCCC
Confidence            99987643

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=96.15  E-value=0.018  Score=47.42  Aligned_cols=32  Identities=34%  Similarity=0.395  Sum_probs=28.8

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNL  103 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~  103 (248)
                      .+|+|+|+++ +|..+++.+...|.+|++++++
T Consensus       136 ~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~  167 (271)
T cd05188         136 DTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRS  167 (271)
T ss_pred             CEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCC
Confidence            7899999988 9999999999999999988753

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.15  E-value=0.034  Score=49.01  Aligned_cols=79  Identities=28%  Similarity=0.308  Sum_probs=49.5

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC-EEEEEecCC-------------------CCcchhhhhhhhhcCCCCceEEEEcc
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLS-------------------RGNIGAVKVLQELFPEPGRLQFIYAD  130 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~-~V~~~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~D  130 (248)
                      ++|+|.| .||+|.+++..|+..|. +++++|+..                   .+.+.+.+.++++.+ ..++..+...
T Consensus       136 ~~VlvvG-~GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np-~v~v~~~~~~  213 (376)
T PRK08762        136 ARVLLIG-AGGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNP-DVQVEAVQER  213 (376)
T ss_pred             CcEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCC-CCEEEEEecc
Confidence            6788886 69999999999999998 788888641                   111112223333322 1234445444


Q ss_pred             CCCHHHHHHHhhcCCCCEEEEccc
Q 025786          131 LGDAKAVNKFFSENAFDAVMHFAA  154 (248)
Q Consensus       131 l~~~~~~~~~~~~~~iD~li~~Ag  154 (248)
                      ++ .+.+.++++  +.|+||++..
T Consensus       214 ~~-~~~~~~~~~--~~D~Vv~~~d  234 (376)
T PRK08762        214 VT-SDNVEALLQ--DVDVVVDGAD  234 (376)
T ss_pred             CC-hHHHHHHHh--CCCEEEECCC
Confidence            44 345666665  5799998753

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=96.15  E-value=0.017  Score=48.87  Aligned_cols=33  Identities=30%  Similarity=0.251  Sum_probs=30.1

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNL  103 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~  103 (248)
                      .+++|+|++|++|..++..+...|++|+++.++
T Consensus       141 ~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~  173 (325)
T TIGR02824       141 ETVLIHGGASGIGTTAIQLAKAFGARVFTTAGS  173 (325)
T ss_pred             CEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCC
Confidence            799999999999999999999999999988753

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=96.09  E-value=0.022  Score=48.26  Aligned_cols=76  Identities=20%  Similarity=0.156  Sum_probs=47.2

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCH-HHHHHHhhcCCCCEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDA-KAVNKFFSENAFDAV  149 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~iD~l  149 (248)
                      .+++|+|++|++|..++..+...|++|++++++..+    .+.+.+.   +. -.++..+..+. +.+.+.....++|++
T Consensus       146 ~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~----~~~~~~~---g~-~~~~~~~~~~~~~~~~~~~~~~~~d~v  217 (328)
T cd08268         146 DSVLITAASSSVGLAAIQIANAAGATVIATTRTSEK----RDALLAL---GA-AHVIVTDEEDLVAEVLRITGGKGVDVV  217 (328)
T ss_pred             CEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHH----HHHHHHc---CC-CEEEecCCccHHHHHHHHhCCCCceEE
Confidence            789999999999999999999999999988753221    1222222   11 12222222221 223333332369999


Q ss_pred             EEccc
Q 025786          150 MHFAA  154 (248)
Q Consensus       150 i~~Ag  154 (248)
                      +++++
T Consensus       218 i~~~~  222 (328)
T cd08268         218 FDPVG  222 (328)
T ss_pred             EECCc
Confidence            99876

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form

Probab=96.07  E-value=0.07  Score=46.47  Aligned_cols=30  Identities=27%  Similarity=0.482  Sum_probs=25.8

Q ss_pred             eEEEEecCCchhHHHHHHHHHHC-CCEEEEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKD-SYRVTIV  100 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~-G~~V~~~  100 (248)
                      ++|.|.||||++|..+++.|.++ +++++.+
T Consensus         1 ~kVaIiGATG~vG~ellr~L~~hP~~el~~l   31 (346)
T TIGR01850         1 IKVAIVGASGYTGGELLRLLLNHPEVEITYL   31 (346)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCceEEEE
Confidence            47999999999999999999987 6687743

This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.05  E-value=0.027  Score=47.57  Aligned_cols=34  Identities=32%  Similarity=0.529  Sum_probs=30.5

Q ss_pred             CCceEEEEecCCchhHHHHHHHHHHCCCEEEEEec
Q 025786           68 EGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDN  102 (248)
Q Consensus        68 ~~~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r  102 (248)
                      .+ |+|+|.|++|-+|+.++..|.++|+.|+++.+
T Consensus       158 ~G-k~vvViG~gg~vGkpia~~L~~~gatVtv~~~  191 (283)
T PRK14192        158 AG-KHAVVVGRSAILGKPMAMMLLNANATVTICHS  191 (283)
T ss_pred             CC-CEEEEECCcHHHHHHHHHHHHhCCCEEEEEeC
Confidence            44 89999999999999999999999999988763

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=96.03  E-value=0.066  Score=42.85  Aligned_cols=77  Identities=21%  Similarity=0.292  Sum_probs=48.6

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC-EEEEEecC---CCCcch---------------hhhhhhhhcCCCCceEEEEccC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNL---SRGNIG---------------AVKVLQELFPEPGRLQFIYADL  131 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~-~V~~~~r~---~~~~~~---------------~~~~~~~~~~~~~~~~~~~~Dl  131 (248)
                      ++|+|.|+ |++|+.++..|+..|. +|+++|..   ..+...               +.+.++++.+ ..++..+..++
T Consensus        22 ~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~~iG~~Ka~~~~~~l~~inp-~~~i~~~~~~i   99 (200)
T TIGR02354        22 ATVAICGL-GGLGSNVAINLARAGIGKLILVDFDVVEPSNLNRQQYKASQVGEPKTEALKENISEINP-YTEIEAYDEKI   99 (200)
T ss_pred             CcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCEEcccccccccCChhhCCCHHHHHHHHHHHHHCC-CCEEEEeeeeC
Confidence            78999985 8999999999999998 69998865   111000               0111222211 23455555566


Q ss_pred             CCHHHHHHHhhcCCCCEEEEc
Q 025786          132 GDAKAVNKFFSENAFDAVMHF  152 (248)
Q Consensus       132 ~~~~~~~~~~~~~~iD~li~~  152 (248)
                      + .+.+.++++  +.|+||-+
T Consensus       100 ~-~~~~~~~~~--~~DlVi~a  117 (200)
T TIGR02354       100 T-EENIDKFFK--DADIVCEA  117 (200)
T ss_pred             C-HhHHHHHhc--CCCEEEEC
Confidence            4 355666665  57888865

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.01  E-value=0.04  Score=47.40  Aligned_cols=34  Identities=26%  Similarity=0.273  Sum_probs=30.0

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSR  105 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~  105 (248)
                      ++|.|.| +|-+|..++..|+..|++|++.|+++.
T Consensus         8 ~~VaVIG-aG~MG~giA~~~a~aG~~V~l~D~~~~   41 (321)
T PRK07066          8 KTFAAIG-SGVIGSGWVARALAHGLDVVAWDPAPG   41 (321)
T ss_pred             CEEEEEC-cCHHHHHHHHHHHhCCCeEEEEeCCHH
Confidence            6788887 599999999999999999999997553

>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2

Probab=96.00  E-value=0.032  Score=47.79  Aligned_cols=78  Identities=26%  Similarity=0.338  Sum_probs=46.7

Q ss_pred             EEEEecCCchhHHHHHHHHHHCCC-EEEEEecCCCCcch-------------------hhhhhhhhcCCCCceEEEEccC
Q 025786           72 HVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIG-------------------AVKVLQELFPEPGRLQFIYADL  131 (248)
Q Consensus        72 ~vlITGasg~IG~~la~~L~~~G~-~V~~~~r~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~Dl  131 (248)
                      +|+|.| .||+|.++++.|+..|. ++.++|...-....                   +.+.++++.+ ..++..+..++
T Consensus         1 kVlIVG-aGGlG~EiaKnLal~Gvg~ItIvD~D~Ve~sNLnRQflf~~~dVGk~Kaevaa~~l~~lNp-~v~V~~~~~~i   78 (312)
T cd01489           1 KVLVVG-AGGIGCELLKNLVLTGFGEIHIIDLDTIDLSNLNRQFLFRKKHVGKSKAQVAKEAVLSFNP-NVKIVAYHANI   78 (312)
T ss_pred             CEEEEC-CCHHHHHHHHHHHHhcCCeEEEEcCCCcchhhcCcCccCChhHcCcHHHHHHHHHHHHHCC-CCeEEEEeccC
Confidence            478888 59999999999999997 78888743111100                   1112222221 23455666677


Q ss_pred             CCHHHHHHHhhcCCCCEEEEcc
Q 025786          132 GDAKAVNKFFSENAFDAVMHFA  153 (248)
Q Consensus       132 ~~~~~~~~~~~~~~iD~li~~A  153 (248)
                      ++.+...++++  +.|+||.+.
T Consensus        79 ~~~~~~~~f~~--~~DvVv~a~   98 (312)
T cd01489          79 KDPDFNVEFFK--QFDLVFNAL   98 (312)
T ss_pred             CCccchHHHHh--cCCEEEECC
Confidence            65433345555  578887653

UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

Probab=95.99  E-value=0.012  Score=53.52  Aligned_cols=32  Identities=22%  Similarity=0.311  Sum_probs=29.2

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNL  103 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~  103 (248)
                      ++++|+|+ |++|++++..|++.|++|++.+|+
T Consensus       333 k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~  364 (477)
T PRK09310        333 QHVAIVGA-GGAAKAIATTLARAGAELLIFNRT  364 (477)
T ss_pred             CEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCC
Confidence            78999995 899999999999999999988764

>PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=95.94  E-value=0.031  Score=48.39  Aligned_cols=28  Identities=21%  Similarity=0.349  Sum_probs=24.6

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEE
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRV   97 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V   97 (248)
                      |.+|.|+||||.+|.++++.|.++++.+
T Consensus         4 ~~~IaIvGATG~vG~eLlrlL~~~~hP~   31 (336)
T PRK05671          4 PLDIAVVGATGTVGEALVQILEERDFPV   31 (336)
T ss_pred             CCEEEEEccCCHHHHHHHHHHhhCCCCc
Confidence            3689999999999999999999877643

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=95.94  E-value=0.026  Score=48.57  Aligned_cols=73  Identities=19%  Similarity=0.209  Sum_probs=45.5

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCE-EEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCC--HHHHHHHhhcCCCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYR-VTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD--AKAVNKFFSENAFD  147 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~iD  147 (248)
                      .+|+|+|+ |++|..++..+...|++ |++++++..+    .+..+++.   .. .+  .|..+  .+.+.++....++|
T Consensus       165 ~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~----~~~~~~~g---a~-~~--i~~~~~~~~~~~~~~~~~~~d  233 (339)
T cd08239         165 DTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPER----LELAKALG---AD-FV--INSGQDDVQEIRELTSGAGAD  233 (339)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHH----HHHHHHhC---CC-EE--EcCCcchHHHHHHHhCCCCCC
Confidence            78999975 99999999999899998 8887643222    22223332   11 11  23323  33344433333699


Q ss_pred             EEEEccc
Q 025786          148 AVMHFAA  154 (248)
Q Consensus       148 ~li~~Ag  154 (248)
                      ++|.+.|
T Consensus       234 ~vid~~g  240 (339)
T cd08239         234 VAIECSG  240 (339)
T ss_pred             EEEECCC
Confidence            9999876

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=95.90  E-value=0.023  Score=50.85  Aligned_cols=69  Identities=19%  Similarity=0.275  Sum_probs=44.6

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC-EEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~l  149 (248)
                      ++|+|.|+ |.+|..+++.|...|+ +|++++|+..+.   ....+.+.   .       ++.+.+++.+.+.  +.|+|
T Consensus       183 ~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra---~~la~~~g---~-------~~~~~~~~~~~l~--~aDvV  246 (423)
T PRK00045        183 KKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERA---EELAEEFG---G-------EAIPLDELPEALA--EADIV  246 (423)
T ss_pred             CEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHH---HHHHHHcC---C-------cEeeHHHHHHHhc--cCCEE
Confidence            89999985 9999999999999997 788888643222   22222221   1       1122344445554  57888


Q ss_pred             EEcccc
Q 025786          150 MHFAAV  155 (248)
Q Consensus       150 i~~Ag~  155 (248)
                      |.+.+.
T Consensus       247 I~aT~s  252 (423)
T PRK00045        247 ISSTGA  252 (423)
T ss_pred             EECCCC
Confidence            887653

>COG0027 PurT Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) [Nucleotide transport and metabolism]

Probab=95.90  E-value=0.037  Score=46.75  Aligned_cols=69  Identities=22%  Similarity=0.302  Sum_probs=53.4

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li  150 (248)
                      +++++.| ||=+|++++-++-+-|.+|+.+||....  .+.+.         --..+..|..|.+.++.++++.++|+||
T Consensus        13 ~kvmLLG-SGELGKEvaIe~QRLG~eViAVDrY~~A--PAmqV---------Ahrs~Vi~MlD~~al~avv~rekPd~IV   80 (394)
T COG0027          13 TKVMLLG-SGELGKEVAIEAQRLGVEVIAVDRYANA--PAMQV---------AHRSYVIDMLDGDALRAVVEREKPDYIV   80 (394)
T ss_pred             eEEEEec-CCccchHHHHHHHhcCCEEEEecCcCCC--hhhhh---------hhheeeeeccCHHHHHHHHHhhCCCeee
Confidence            6788887 8999999999999999999999985432  11111         1123567999999999999887888886


Q ss_pred             E
Q 025786          151 H  151 (248)
Q Consensus       151 ~  151 (248)
                      -
T Consensus        81 p   81 (394)
T COG0027          81 P   81 (394)
T ss_pred             e
Confidence            4

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=95.88  E-value=0.13  Score=47.02  Aligned_cols=33  Identities=30%  Similarity=0.180  Sum_probs=29.5

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~  104 (248)
                      .+|+|+| .|.+|...+..+...|++|+++|+++
T Consensus       166 ~kVlViG-aG~iGL~Ai~~Ak~lGA~V~a~D~~~  198 (509)
T PRK09424        166 AKVLVIG-AGVAGLAAIGAAGSLGAIVRAFDTRP  198 (509)
T ss_pred             CEEEEEC-CcHHHHHHHHHHHHCCCEEEEEeCCH
Confidence            8999998 59999999999999999999998644

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=95.87  E-value=0.039  Score=46.88  Aligned_cols=74  Identities=18%  Similarity=0.109  Sum_probs=46.8

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHH---HHHHHhhcCCCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAK---AVNKFFSENAFD  147 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~---~~~~~~~~~~iD  147 (248)
                      .+++|+|++|.+|..++..+...|++|+.+++...+    .+.++++.   .. .++  |..+.+   .+.+.....++|
T Consensus       144 ~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~----~~~~~~~g---~~-~~~--~~~~~~~~~~~~~~~~~~~~d  213 (324)
T cd08244         144 DVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAK----TALVRALG---AD-VAV--DYTRPDWPDQVREALGGGGVT  213 (324)
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHH----HHHHHHcC---CC-EEE--ecCCccHHHHHHHHcCCCCce
Confidence            789999999999999999999999999888753322    12222221   11 122  222322   233333323699


Q ss_pred             EEEEccc
Q 025786          148 AVMHFAA  154 (248)
Q Consensus       148 ~li~~Ag  154 (248)
                      +++++.|
T Consensus       214 ~vl~~~g  220 (324)
T cd08244         214 VVLDGVG  220 (324)
T ss_pred             EEEECCC
Confidence            9999876

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=95.86  E-value=0.03  Score=47.79  Aligned_cols=34  Identities=38%  Similarity=0.403  Sum_probs=30.4

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~  104 (248)
                      .+++|.|++|.+|..++..+...|++|++++++.
T Consensus       148 ~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~  181 (326)
T cd08289         148 GPVLVTGATGGVGSLAVSILAKLGYEVVASTGKA  181 (326)
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCH
Confidence            7999999999999999999999999999887543

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=95.86  E-value=0.1  Score=44.08  Aligned_cols=104  Identities=17%  Similarity=0.177  Sum_probs=60.9

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc---CCC
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE---NAF  146 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~---~~i  146 (248)
                      +.+++|++|+|.+|+-..+--.-+|++|+.+.-   .. +..+.+.+......     -.|-.++ ++.+.+++   .+|
T Consensus       151 GetvvVSaAaGaVGsvvgQiAKlkG~rVVGiaG---g~-eK~~~l~~~lGfD~-----~idyk~~-d~~~~L~~a~P~GI  220 (340)
T COG2130         151 GETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAG---GA-EKCDFLTEELGFDA-----GIDYKAE-DFAQALKEACPKGI  220 (340)
T ss_pred             CCEEEEEecccccchHHHHHHHhhCCeEEEecC---CH-HHHHHHHHhcCCce-----eeecCcc-cHHHHHHHHCCCCe
Confidence            399999999999999766655567999998762   22 22233333111111     1232222 34444443   479


Q ss_pred             CEEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCC
Q 025786          147 DAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEP  203 (248)
Q Consensus       147 D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~  203 (248)
                      |+.|-|.|-.           .++       .+++.+..  ..||+..+-++.|+..
T Consensus       221 DvyfeNVGg~-----------v~D-------Av~~~ln~--~aRi~~CG~IS~YN~~  257 (340)
T COG2130         221 DVYFENVGGE-----------VLD-------AVLPLLNL--FARIPVCGAISQYNAP  257 (340)
T ss_pred             EEEEEcCCch-----------HHH-------HHHHhhcc--ccceeeeeehhhcCCC
Confidence            9999998731           111       12333322  2588888888888654

>PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated

Probab=95.86  E-value=0.06  Score=47.59  Aligned_cols=70  Identities=20%  Similarity=0.276  Sum_probs=51.4

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li  150 (248)
                      |+|+|+|+ |.+|+.++..+.+.|++|++++..+...  ...    .   ..  ..+..|..|.+.+.+++++.++|.|+
T Consensus        13 ~~ilIiG~-g~~~~~~~~a~~~~G~~v~~~~~~~~~~--~~~----~---ad--~~~~~~~~d~~~l~~~~~~~~id~vi   80 (395)
T PRK09288         13 TRVMLLGS-GELGKEVAIEAQRLGVEVIAVDRYANAP--AMQ----V---AH--RSHVIDMLDGDALRAVIEREKPDYIV   80 (395)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCc--hHH----h---hh--heEECCCCCHHHHHHHHHHhCCCEEE
Confidence            78999985 6799999999999999999988543211  111    0   01  23567888999999888877789887


Q ss_pred             Ec
Q 025786          151 HF  152 (248)
Q Consensus       151 ~~  152 (248)
                      -.
T Consensus        81 ~~   82 (395)
T PRK09288         81 PE   82 (395)
T ss_pred             Ee
Confidence            53

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=95.85  E-value=0.042  Score=47.38  Aligned_cols=72  Identities=17%  Similarity=0.075  Sum_probs=47.9

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~l  149 (248)
                      +++|+|+|.. |+|...++.....|++|++++++.++.+.    .+++.   . -.++  |-+|.+..+.+-+  .+|++
T Consensus       167 G~~V~I~G~G-GlGh~avQ~Aka~ga~Via~~~~~~K~e~----a~~lG---A-d~~i--~~~~~~~~~~~~~--~~d~i  233 (339)
T COG1064         167 GKWVAVVGAG-GLGHMAVQYAKAMGAEVIAITRSEEKLEL----AKKLG---A-DHVI--NSSDSDALEAVKE--IADAI  233 (339)
T ss_pred             CCEEEEECCc-HHHHHHHHHHHHcCCeEEEEeCChHHHHH----HHHhC---C-cEEE--EcCCchhhHHhHh--hCcEE
Confidence            3899999987 99998888887899999999976544322    23331   1 1222  2234555544443  38999


Q ss_pred             EEccc
Q 025786          150 MHFAA  154 (248)
Q Consensus       150 i~~Ag  154 (248)
                      |.+++
T Consensus       234 i~tv~  238 (339)
T COG1064         234 IDTVG  238 (339)
T ss_pred             EECCC
Confidence            99886

>PRK08223 hypothetical protein; Validated

Probab=95.81  E-value=0.034  Score=46.90  Aligned_cols=31  Identities=29%  Similarity=0.409  Sum_probs=27.4

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC-EEEEEec
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDN  102 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~-~V~~~~r  102 (248)
                      .+|+|.| .||+|.+++..|+..|. ++.++|.
T Consensus        28 s~VlIvG-~GGLGs~va~~LA~aGVG~i~lvD~   59 (287)
T PRK08223         28 SRVAIAG-LGGVGGIHLLTLARLGIGKFTIADF   59 (287)
T ss_pred             CCEEEEC-CCHHHHHHHHHHHHhCCCeEEEEeC
Confidence            7899998 68999999999999997 7888874

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=95.80  E-value=0.031  Score=47.72  Aligned_cols=33  Identities=24%  Similarity=0.179  Sum_probs=30.0

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNL  103 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~  103 (248)
                      .+++|+|++|.+|..++..+...|++|++++++
T Consensus       147 ~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~  179 (329)
T cd05288         147 ETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGS  179 (329)
T ss_pred             CEEEEecCcchHHHHHHHHHHHcCCEEEEEeCC
Confidence            799999999999999999999999999888743

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=95.80  E-value=0.036  Score=47.16  Aligned_cols=74  Identities=12%  Similarity=0.130  Sum_probs=46.6

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCC---HHHHHHHhhcCCCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD---AKAVNKFFSENAFD  147 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~---~~~~~~~~~~~~iD  147 (248)
                      .+++|.|++|.+|..++..+...|++|+++.++..+    .+.++++   +.. .++  |..+   .+.+.+.....++|
T Consensus       141 ~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~----~~~~~~~---g~~-~~~--~~~~~~~~~~i~~~~~~~~~d  210 (324)
T cd08292         141 QWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAG----VAELRAL---GIG-PVV--STEQPGWQDKVREAAGGAPIS  210 (324)
T ss_pred             CEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHH----HHHHHhc---CCC-EEE--cCCCchHHHHHHHHhCCCCCc
Confidence            789999999999999999999999999887643222    1222222   111 122  2222   22333333324699


Q ss_pred             EEEEccc
Q 025786          148 AVMHFAA  154 (248)
Q Consensus       148 ~li~~Ag  154 (248)
                      +++++.|
T Consensus       211 ~v~d~~g  217 (324)
T cd08292         211 VALDSVG  217 (324)
T ss_pred             EEEECCC
Confidence            9999877

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms)

Probab=95.79  E-value=0.062  Score=46.66  Aligned_cols=27  Identities=19%  Similarity=0.406  Sum_probs=24.0

Q ss_pred             EEEEecCCchhHHHHHHHHHHCCCEEE
Q 025786           72 HVLVTGGAGYIGSHAALRLLKDSYRVT   98 (248)
Q Consensus        72 ~vlITGasg~IG~~la~~L~~~G~~V~   98 (248)
                      +|.|.||||++|.++++.|.++++.++
T Consensus         1 ~VaIvGAtG~vG~eLi~lL~~~~hp~~   27 (339)
T TIGR01296         1 NVAIVGATGAVGQEMLKILEERNFPID   27 (339)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhCCCChh
Confidence            478999999999999999999888643

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978.

>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]

Probab=95.79  E-value=0.017  Score=46.12  Aligned_cols=34  Identities=35%  Similarity=0.403  Sum_probs=27.8

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCC
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~  104 (248)
                      ||++.| ||+|-||..+++.|++.|++|++..|..
T Consensus         1 m~~~~i-~GtGniG~alA~~~a~ag~eV~igs~r~   34 (211)
T COG2085           1 MMIIAI-IGTGNIGSALALRLAKAGHEVIIGSSRG   34 (211)
T ss_pred             CcEEEE-eccChHHHHHHHHHHhCCCeEEEecCCC
Confidence            355555 5589999999999999999999986543

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=95.77  E-value=0.038  Score=46.55  Aligned_cols=76  Identities=21%  Similarity=0.146  Sum_probs=47.4

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCC-HHHHHHHhhcCCCCEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD-AKAVNKFFSENAFDAV  149 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~iD~l  149 (248)
                      .+++|+|++|.+|..++..+...|++|+.++++..+    .+.+.+..   .. ..+..+-.+ .+.+.+......+|.+
T Consensus       141 ~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~----~~~~~~~g---~~-~~~~~~~~~~~~~i~~~~~~~~~d~v  212 (323)
T cd08241         141 ETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEK----LALARALG---AD-HVIDYRDPDLRERVKALTGGRGVDVV  212 (323)
T ss_pred             CEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCHHH----HHHHHHcC---Cc-eeeecCCccHHHHHHHHcCCCCcEEE
Confidence            789999999999999999999999999988754322    12222221   11 112222111 2334443333469999


Q ss_pred             EEccc
Q 025786          150 MHFAA  154 (248)
Q Consensus       150 i~~Ag  154 (248)
                      +++.|
T Consensus       213 ~~~~g  217 (323)
T cd08241         213 YDPVG  217 (323)
T ss_pred             EECcc
Confidence            99876

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>PRK00048 dihydrodipicolinate reductase; Provisional

Probab=95.73  E-value=0.036  Score=46.15  Aligned_cols=31  Identities=16%  Similarity=0.222  Sum_probs=26.2

Q ss_pred             eEEEEecCCchhHHHHHHHHHHC-CCEEEEEe
Q 025786           71 THVLVTGGAGYIGSHAALRLLKD-SYRVTIVD  101 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~-G~~V~~~~  101 (248)
                      ++|.|+|++|.+|+.+++.+.+. +.+++.+.
T Consensus         2 mkV~IiG~~G~mG~~i~~~l~~~~~~elvav~   33 (257)
T PRK00048          2 IKVAVAGASGRMGRELIEAVEAAEDLELVAAV   33 (257)
T ss_pred             cEEEEECCCCHHHHHHHHHHHhCCCCEEEEEE
Confidence            68999999999999999988864 67877643

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=95.72  E-value=0.053  Score=47.67  Aligned_cols=78  Identities=26%  Similarity=0.324  Sum_probs=48.8

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC-EEEEEecCCCCcc-------------------hhhhhhhhhcCCCCceEEEEcc
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNI-------------------GAVKVLQELFPEPGRLQFIYAD  130 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~-~V~~~~r~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~D  130 (248)
                      .+|+|.| .||+|.++++.|+..|. +++++|...-...                   .+.+.++++.+ ..+++.+...
T Consensus        42 ~~VliiG-~GglG~~v~~~La~~Gvg~i~ivD~D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~np-~v~i~~~~~~  119 (370)
T PRK05600         42 ARVLVIG-AGGLGCPAMQSLASAGVGTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEIQP-DIRVNALRER  119 (370)
T ss_pred             CcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCCEEccccccccccCChhHCCCHHHHHHHHHHHHHCC-CCeeEEeeee
Confidence            7899998 58999999999999996 8888885311110                   11122223321 2345555555


Q ss_pred             CCCHHHHHHHhhcCCCCEEEEcc
Q 025786          131 LGDAKAVNKFFSENAFDAVMHFA  153 (248)
Q Consensus       131 l~~~~~~~~~~~~~~iD~li~~A  153 (248)
                      ++ .+.+.++++  ++|+||.+.
T Consensus       120 i~-~~~~~~~~~--~~DlVid~~  139 (370)
T PRK05600        120 LT-AENAVELLN--GVDLVLDGS  139 (370)
T ss_pred             cC-HHHHHHHHh--CCCEEEECC
Confidence            54 445566665  578888664

>PRK08057 cobalt-precorrin-6x reductase; Reviewed

Probab=95.72  E-value=0.36  Score=39.99  Aligned_cols=72  Identities=17%  Similarity=0.244  Sum_probs=54.1

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~l  149 (248)
                      |++|||.|||+ =|+.++..|.++|++|++..-.....           .....+....+-+.|.+++.+++++.+++.|
T Consensus         2 ~~~IlvlgGT~-egr~la~~L~~~g~~v~~Svat~~g~-----------~~~~~~~v~~G~l~~~~~l~~~l~~~~i~~V   69 (248)
T PRK08057          2 MPRILLLGGTS-EARALARALAAAGVDIVLSLAGRTGG-----------PADLPGPVRVGGFGGAEGLAAYLREEGIDLV   69 (248)
T ss_pred             CceEEEEechH-HHHHHHHHHHhCCCeEEEEEccCCCC-----------cccCCceEEECCCCCHHHHHHHHHHCCCCEE
Confidence            47899999876 68999999999999888754221111           1112456667778799999999998899999


Q ss_pred             EEcc
Q 025786          150 MHFA  153 (248)
Q Consensus       150 i~~A  153 (248)
                      |...
T Consensus        70 IDAT   73 (248)
T PRK08057         70 IDAT   73 (248)
T ss_pred             EECC
Confidence            9864

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=95.71  E-value=0.028  Score=50.25  Aligned_cols=68  Identities=19%  Similarity=0.340  Sum_probs=44.6

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCC-CEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDS-YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~l  149 (248)
                      ++++|.|+ |.+|..+++.|...| .+|++++|+..+.   .+..+.+.   .  ..+     +.+++.+.+.  +.|+|
T Consensus       181 ~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra---~~la~~~g---~--~~i-----~~~~l~~~l~--~aDvV  244 (417)
T TIGR01035       181 KKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERA---EDLAKELG---G--EAV-----KFEDLEEYLA--EADIV  244 (417)
T ss_pred             CEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHH---HHHHHHcC---C--eEe-----eHHHHHHHHh--hCCEE
Confidence            89999996 999999999999999 6899988654322   22222221   1  112     2234555554  57888


Q ss_pred             EEccc
Q 025786          150 MHFAA  154 (248)
Q Consensus       150 i~~Ag  154 (248)
                      |.+.+
T Consensus       245 i~aT~  249 (417)
T TIGR01035       245 ISSTG  249 (417)
T ss_pred             EECCC
Confidence            88765

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=95.67  E-value=0.04  Score=46.80  Aligned_cols=73  Identities=19%  Similarity=0.231  Sum_probs=47.6

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCC-CHHHHHHHhhcCCCCE
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG-DAKAVNKFFSENAFDA  148 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-~~~~~~~~~~~~~iD~  148 (248)
                      ++++.|+|+.| +|.--++.-.+-|++|++++++.++.+++.   +.+.   .+.   -.|.+ |++.++++.+.  .|.
T Consensus       182 G~~vgI~GlGG-LGh~aVq~AKAMG~rV~vis~~~~kkeea~---~~LG---Ad~---fv~~~~d~d~~~~~~~~--~dg  249 (360)
T KOG0023|consen  182 GKWVGIVGLGG-LGHMAVQYAKAMGMRVTVISTSSKKKEEAI---KSLG---ADV---FVDSTEDPDIMKAIMKT--TDG  249 (360)
T ss_pred             CcEEEEecCcc-cchHHHHHHHHhCcEEEEEeCCchhHHHHH---HhcC---cce---eEEecCCHHHHHHHHHh--hcC
Confidence            39999999877 998766666667999999997665554433   3332   111   23455 77777777763  455


Q ss_pred             EEEccc
Q 025786          149 VMHFAA  154 (248)
Q Consensus       149 li~~Ag  154 (248)
                      ++|.+.
T Consensus       250 ~~~~v~  255 (360)
T KOG0023|consen  250 GIDTVS  255 (360)
T ss_pred             cceeee
Confidence            555543

>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1

Probab=95.66  E-value=0.05  Score=46.54  Aligned_cols=76  Identities=12%  Similarity=0.124  Sum_probs=44.8

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCC-HHHHHHHhhcCCCCEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD-AKAVNKFFSENAFDAV  149 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~iD~l  149 (248)
                      ..++++||+|++|..++......|++|++++++..+    .+..+++   +.. .++..+-.+ .+.+.+.....++|++
T Consensus       145 ~vlv~~~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~----~~~~~~~---g~~-~~i~~~~~~~~~~v~~~~~~~~~d~v  216 (324)
T cd08291         145 KAVVHTAAASALGRMLVRLCKADGIKVINIVRRKEQ----VDLLKKI---GAE-YVLNSSDPDFLEDLKELIAKLNATIF  216 (324)
T ss_pred             cEEEEccCccHHHHHHHHHHHHcCCEEEEEeCCHHH----HHHHHHc---CCc-EEEECCCccHHHHHHHHhCCCCCcEE
Confidence            556666999999999988888889999887753322    2222232   111 222221111 1233343333469999


Q ss_pred             EEccc
Q 025786          150 MHFAA  154 (248)
Q Consensus       150 i~~Ag  154 (248)
                      |++.|
T Consensus       217 id~~g  221 (324)
T cd08291         217 FDAVG  221 (324)
T ss_pred             EECCC
Confidence            99876

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=95.65  E-value=0.28  Score=41.12  Aligned_cols=31  Identities=35%  Similarity=0.515  Sum_probs=27.2

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCC-CEEEEEec
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDS-YRVTIVDN  102 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G-~~V~~~~r  102 (248)
                      .+|+|.| .||+|.++++.|+..| -+++++|.
T Consensus        31 s~VlVvG-~GGVGs~vae~Lar~GVg~itLiD~   62 (268)
T PRK15116         31 AHICVVG-IGGVGSWAAEALARTGIGAITLIDM   62 (268)
T ss_pred             CCEEEEC-cCHHHHHHHHHHHHcCCCEEEEEeC
Confidence            7888887 6899999999999999 48888874

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.58  E-value=0.23  Score=45.16  Aligned_cols=73  Identities=23%  Similarity=0.094  Sum_probs=45.6

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li  150 (248)
                      ++|+|.|+ |++|.++++.|.++|++|+++++....  ......+.+...  .+.++..+-..      ..  ..+|.||
T Consensus        17 ~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~~~--~~~~~~~~l~~~--gv~~~~~~~~~------~~--~~~D~Vv   83 (480)
T PRK01438         17 LRVVVAGL-GVSGFAAADALLELGARVTVVDDGDDE--RHRALAAILEAL--GATVRLGPGPT------LP--EDTDLVV   83 (480)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchh--hhHHHHHHHHHc--CCEEEECCCcc------cc--CCCCEEE
Confidence            78999995 889999999999999999998854321  111111222111  34444332111      11  2579999


Q ss_pred             Eccccc
Q 025786          151 HFAAVA  156 (248)
Q Consensus       151 ~~Ag~~  156 (248)
                      -..|+.
T Consensus        84 ~s~Gi~   89 (480)
T PRK01438         84 TSPGWR   89 (480)
T ss_pred             ECCCcC
Confidence            888864

>PRK10669 putative cation:proton antiport protein; Provisional

Probab=95.57  E-value=0.027  Score=52.31  Aligned_cols=70  Identities=16%  Similarity=0.279  Sum_probs=50.1

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li  150 (248)
                      .+++|.| .|-+|++++++|.++|++|+++|.++++    .+..++     .....+.+|.+|++.++++-- .+.|.++
T Consensus       418 ~hiiI~G-~G~~G~~la~~L~~~g~~vvvId~d~~~----~~~~~~-----~g~~~i~GD~~~~~~L~~a~i-~~a~~vi  486 (558)
T PRK10669        418 NHALLVG-YGRVGSLLGEKLLAAGIPLVVIETSRTR----VDELRE-----RGIRAVLGNAANEEIMQLAHL-DCARWLL  486 (558)
T ss_pred             CCEEEEC-CChHHHHHHHHHHHCCCCEEEEECCHHH----HHHHHH-----CCCeEEEcCCCCHHHHHhcCc-cccCEEE
Confidence            4688887 6899999999999999999999853321    222222     247789999999988776432 2567665


Q ss_pred             E
Q 025786          151 H  151 (248)
Q Consensus       151 ~  151 (248)
                      -
T Consensus       487 v  487 (558)
T PRK10669        487 L  487 (558)
T ss_pred             E
Confidence            3

>KOG3019 consensus Predicted nucleoside-diphosphate sugar epimerase [Nucleotide transport and metabolism]

Probab=95.54  E-value=0.026  Score=45.66  Aligned_cols=154  Identities=13%  Similarity=0.030  Sum_probs=82.1

Q ss_pred             eEEEEecCCchhHHHHHH-----HHHHCC----CEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHH-HHHHH
Q 025786           71 THVLVTGGAGYIGSHAAL-----RLLKDS----YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAK-AVNKF  140 (248)
Q Consensus        71 k~vlITGasg~IG~~la~-----~L~~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~  140 (248)
                      +..++-+++|.|+..+..     ++-+.+    |.|.++.|.+...               ++.+...|..-.. ++.. 
T Consensus        13 r~a~~~~~~g~i~~nl~~~~~~~H~t~~~~a~~h~vtv~sR~pg~~---------------ritw~el~~~Gip~sc~a-   76 (315)
T KOG3019|consen   13 RDAVSNWSNGIIRENLGSETSCCHDTNVHSADNHAVTVLSRSPGKA---------------RITWPELDFPGIPISCVA-   76 (315)
T ss_pred             ccCCCCccccchhccccCcccccccCCCCcccccceEEEecCCCCc---------------ccccchhcCCCCceehHH-
Confidence            567788899999988776     443334    7898888765432               3333333332111 1111 


Q ss_pred             hhcCCCCEEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcC--CCEEEEeccceecCCCCCCCCCCCCCCCCCC
Q 025786          141 FSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHG--VDTLIYSSTCATYGEPEKMPITEETPQAPIN  218 (248)
Q Consensus       141 ~~~~~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~--~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~  218 (248)
                          .+..+.+|+...-......-..+.+..-+..+..+.+++.+..  .+..|++|-.++|-.+....++|+.+....+
T Consensus        77 ----~vna~g~n~l~P~rRWsp~fqkev~gSRi~~t~~la~aI~~aPq~~~~~Vlv~gva~y~pS~s~eY~e~~~~qgfd  152 (315)
T KOG3019|consen   77 ----GVNAVGNNALLPIRRWSPEFQKEVKGSRIRVTSKLADAINNAPQEARPTVLVSGVAVYVPSESQEYSEKIVHQGFD  152 (315)
T ss_pred             ----HHhhhhhhccCchhhcCHHHHHHhhcceeeHHHHHHHHHhcCCCCCCCeEEEEeeEEeccccccccccccccCChH
Confidence                1233344444221111111112222233344777888887653  4578999999999776666778877766665


Q ss_pred             hHHHHHHHHHHHHHHHhhcCCCcEEEEe
Q 025786          219 PYGKAKKMAEDIILDFSKNSDMAVLQCH  246 (248)
Q Consensus       219 ~Y~~sK~a~e~l~~~~~~~~gi~~~~v~  246 (248)
                      ..+.--.+-|..+..-.  ...+++++|
T Consensus       153 ~~srL~l~WE~aA~~~~--~~~r~~~iR  178 (315)
T KOG3019|consen  153 ILSRLCLEWEGAALKAN--KDVRVALIR  178 (315)
T ss_pred             HHHHHHHHHHHHhhccC--cceeEEEEE
Confidence            44332223333222211  236666665

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=95.54  E-value=0.036  Score=47.52  Aligned_cols=69  Identities=23%  Similarity=0.306  Sum_probs=45.2

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCC-CEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDS-YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~l  149 (248)
                      ++|+|.|+ |.+|..+++.|...| .+|++++|+..+.   .+..+++   +.  .     +.+.+++.+.+.  ..|+|
T Consensus       179 ~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra---~~la~~~---g~--~-----~~~~~~~~~~l~--~aDvV  242 (311)
T cd05213         179 KKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERA---EELAKEL---GG--N-----AVPLDELLELLN--EADVV  242 (311)
T ss_pred             CEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHH---HHHHHHc---CC--e-----EEeHHHHHHHHh--cCCEE
Confidence            88999986 999999999999877 5788887643322   2222222   11  1     123345555555  57999


Q ss_pred             EEcccc
Q 025786          150 MHFAAV  155 (248)
Q Consensus       150 i~~Ag~  155 (248)
                      |.+.+.
T Consensus       243 i~at~~  248 (311)
T cd05213         243 ISATGA  248 (311)
T ss_pred             EECCCC
Confidence            988763

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=95.53  E-value=0.31  Score=38.85  Aligned_cols=31  Identities=26%  Similarity=0.444  Sum_probs=26.8

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC-EEEEEec
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDN  102 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~-~V~~~~r  102 (248)
                      ++|+|.| .|++|.++++.|+..|. +++++|.
T Consensus        22 s~VlIiG-~gglG~evak~La~~GVg~i~lvD~   53 (197)
T cd01492          22 ARILLIG-LKGLGAEIAKNLVLSGIGSLTILDD   53 (197)
T ss_pred             CcEEEEc-CCHHHHHHHHHHHHcCCCEEEEEEC
Confidence            7899997 56699999999999997 6888874

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=95.53  E-value=0.027  Score=43.46  Aligned_cols=34  Identities=32%  Similarity=0.454  Sum_probs=28.5

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCC
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~  104 (248)
                      |++|-+.| .|-+|+.+++.|+++|++|++.+|+.
T Consensus         1 m~~Ig~IG-lG~mG~~~a~~L~~~g~~v~~~d~~~   34 (163)
T PF03446_consen    1 MMKIGFIG-LGNMGSAMARNLAKAGYEVTVYDRSP   34 (163)
T ss_dssp             -BEEEEE---SHHHHHHHHHHHHTTTEEEEEESSH
T ss_pred             CCEEEEEc-hHHHHHHHHHHHHhcCCeEEeeccch
Confidence            58899998 59999999999999999999998654

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like

Probab=95.52  E-value=0.078  Score=43.52  Aligned_cols=30  Identities=30%  Similarity=0.495  Sum_probs=25.7

Q ss_pred             EEEEecCCchhHHHHHHHHHHCCC-EEEEEec
Q 025786           72 HVLVTGGAGYIGSHAALRLLKDSY-RVTIVDN  102 (248)
Q Consensus        72 ~vlITGasg~IG~~la~~L~~~G~-~V~~~~r  102 (248)
                      +|+|.| .||+|.++++.|+..|. ++.++|.
T Consensus         1 kVlvvG-~GGlG~eilk~La~~Gvg~i~ivD~   31 (234)
T cd01484           1 KVLLVG-AGGIGCELLKNLALMGFGQIHVIDM   31 (234)
T ss_pred             CEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeC
Confidence            477887 79999999999999997 7888874

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.52  E-value=0.07  Score=45.04  Aligned_cols=34  Identities=29%  Similarity=0.472  Sum_probs=31.1

Q ss_pred             CCceEEEEecCCchhHHHHHHHHHHCCCEEEEEec
Q 025786           68 EGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDN  102 (248)
Q Consensus        68 ~~~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r  102 (248)
                      .| ++|+|.|++.-+|+.++..|.++|+.|+++.+
T Consensus       157 ~G-k~vvVIGrs~~VG~pla~lL~~~gatVtv~~s  190 (286)
T PRK14175        157 EG-KNAVVIGRSHIVGQPVSKLLLQKNASVTILHS  190 (286)
T ss_pred             CC-CEEEEECCCchhHHHHHHHHHHCCCeEEEEeC
Confidence            44 99999999999999999999999999998763

>PRK12767 carbamoyl phosphate synthase-like protein; Provisional

Probab=95.49  E-value=0.059  Score=46.26  Aligned_cols=70  Identities=17%  Similarity=0.197  Sum_probs=44.4

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCC--CEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEcc-CCC---HHHHHHHhhc
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDS--YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYAD-LGD---AKAVNKFFSE  143 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D-l~~---~~~~~~~~~~  143 (248)
                      |++|||||+++.+  .+++.|.+.|  ++|++++.++..  ....    .   ...  ++..+ ..+   .+.+.+++++
T Consensus         1 ~~~vLv~g~~~~~--~~~~~l~~~~~g~~vi~~d~~~~~--~~~~----~---~d~--~~~~p~~~~~~~~~~l~~~~~~   67 (326)
T PRK12767          1 MMNILVTSAGRRV--QLVKALKKSLLKGRVIGADISELA--PALY----F---ADK--FYVVPKVTDPNYIDRLLDICKK   67 (326)
T ss_pred             CceEEEecCCccH--HHHHHHHHhccCCEEEEECCCCcc--hhhH----h---ccC--cEecCCCCChhHHHHHHHHHHH
Confidence            6899999998777  8899999984  999998754221  1111    0   011  12222 233   3556666666


Q ss_pred             CCCCEEEEc
Q 025786          144 NAFDAVMHF  152 (248)
Q Consensus       144 ~~iD~li~~  152 (248)
                      .++|+|+-+
T Consensus        68 ~~id~ii~~   76 (326)
T PRK12767         68 EKIDLLIPL   76 (326)
T ss_pred             hCCCEEEEC
Confidence            789998864

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=95.44  E-value=0.34  Score=39.68  Aligned_cols=31  Identities=39%  Similarity=0.565  Sum_probs=27.5

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC-EEEEEec
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDN  102 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~-~V~~~~r  102 (248)
                      .+|+|.| .||+|+++++.|+..|. +++++|.
T Consensus        12 ~~VlVvG-~GGvGs~va~~Lar~GVg~i~LvD~   43 (231)
T cd00755          12 AHVAVVG-LGGVGSWAAEALARSGVGKLTLIDF   43 (231)
T ss_pred             CCEEEEC-CCHHHHHHHHHHHHcCCCEEEEECC
Confidence            6899998 69999999999999997 7888874

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2

Probab=95.41  E-value=0.056  Score=44.12  Aligned_cols=32  Identities=25%  Similarity=0.417  Sum_probs=29.1

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC---EEEEEecC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY---RVTIVDNL  103 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~---~V~~~~r~  103 (248)
                      ++++|.|+ |+.|+.++..|.+.|.   +|++++|.
T Consensus        26 ~rvlvlGA-GgAg~aiA~~L~~~G~~~~~i~ivdr~   60 (226)
T cd05311          26 VKIVINGA-GAAGIAIARLLLAAGAKPENIVVVDSK   60 (226)
T ss_pred             CEEEEECc-hHHHHHHHHHHHHcCcCcceEEEEeCC
Confidence            78999996 9999999999999997   49999986

Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph

>PRK06019 phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed

Probab=95.39  E-value=0.11  Score=45.71  Aligned_cols=67  Identities=24%  Similarity=0.364  Sum_probs=49.1

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~l  149 (248)
                      |++|+|.|| |.+|+.++....+.|++|++++..+..  ....    .     --..+..|..|.+.+.++++  .+|+|
T Consensus         2 ~~~igilG~-Gql~~ml~~aa~~lG~~v~~~d~~~~~--pa~~----~-----ad~~~~~~~~D~~~l~~~a~--~~dvi   67 (372)
T PRK06019          2 MKTIGIIGG-GQLGRMLALAAAPLGYKVIVLDPDPDS--PAAQ----V-----ADEVIVADYDDVAALRELAE--QCDVI   67 (372)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCCCC--chhH----h-----CceEEecCCCCHHHHHHHHh--cCCEE
Confidence            588999997 699999999999999999999853221  1111    1     01345678889999998887  57776


Q ss_pred             E
Q 025786          150 M  150 (248)
Q Consensus       150 i  150 (248)
                      .
T Consensus        68 t   68 (372)
T PRK06019         68 T   68 (372)
T ss_pred             E
Confidence            3

>TIGR01142 purT phosphoribosylglycinamide formyltransferase 2

Probab=95.38  E-value=0.086  Score=46.31  Aligned_cols=69  Identities=19%  Similarity=0.282  Sum_probs=51.0

Q ss_pred             EEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEEE
Q 025786           72 HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVMH  151 (248)
Q Consensus        72 ~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li~  151 (248)
                      +|+|.| +|.+|..+++.+.+.|++|++++.++...  ...    .   . + ..+..|..|.+.+.+++++.++|+|+-
T Consensus         1 kililG-~g~~~~~l~~aa~~~G~~v~~~d~~~~~~--~~~----~---a-d-~~~~~~~~d~~~l~~~~~~~~id~v~~   68 (380)
T TIGR01142         1 RVLLLG-SGELGKEVAIEAQRLGVEVIAVDRYANAP--AMQ----V---A-H-RSYVINMLDGDALRAVIEREKPDYIVP   68 (380)
T ss_pred             CEEEEC-CCHHHHHHHHHHHHcCCEEEEEeCCCCCc--hhh----h---C-c-eEEEcCCCCHHHHHHHHHHhCCCEEEe
Confidence            488999 58899999999999999999998543211  111    1   1 1 335678889999999988777999875


Q ss_pred             c
Q 025786          152 F  152 (248)
Q Consensus       152 ~  152 (248)
                      .
T Consensus        69 ~   69 (380)
T TIGR01142        69 E   69 (380)
T ss_pred             c
Confidence            4

This enzyme is an alternative to PurN (TIGR00639)

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=95.37  E-value=0.053  Score=45.55  Aligned_cols=32  Identities=22%  Similarity=0.051  Sum_probs=29.4

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEec
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDN  102 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r  102 (248)
                      .+++|.|++|.+|..+++.+...|++|+++++
T Consensus       138 ~~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~  169 (320)
T cd05286         138 DTVLVHAAAGGVGLLLTQWAKALGATVIGTVS  169 (320)
T ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEcC
Confidence            78999999999999999999999999988764

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.33  E-value=0.14  Score=46.11  Aligned_cols=74  Identities=20%  Similarity=0.206  Sum_probs=46.8

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li  150 (248)
                      ++|+|+|. |++|.++++.|+++|++|++.|......  ....+++.   ...+.+...+.. ..    .+.  +.|.||
T Consensus         6 ~~~~v~G~-g~~G~~~a~~l~~~g~~v~~~d~~~~~~--~~~~l~~~---~~gi~~~~g~~~-~~----~~~--~~d~vv   72 (445)
T PRK04308          6 KKILVAGL-GGTGISMIAYLRKNGAEVAAYDAELKPE--RVAQIGKM---FDGLVFYTGRLK-DA----LDN--GFDILA   72 (445)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCch--hHHHHhhc---cCCcEEEeCCCC-HH----HHh--CCCEEE
Confidence            88999997 5899999999999999999988543221  11112211   113444443322 11    122  579999


Q ss_pred             Ecccccc
Q 025786          151 HFAAVAY  157 (248)
Q Consensus       151 ~~Ag~~~  157 (248)
                      ...|+..
T Consensus        73 ~spgi~~   79 (445)
T PRK04308         73 LSPGISE   79 (445)
T ss_pred             ECCCCCC
Confidence            9988753

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=95.29  E-value=0.062  Score=46.81  Aligned_cols=73  Identities=18%  Similarity=0.154  Sum_probs=44.3

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCE-EEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCH---HHHHHHhhcCCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYR-VTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDA---KAVNKFFSENAF  146 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~---~~~~~~~~~~~i  146 (248)
                      ++|+|.|+ |++|..++..+...|++ |++++++..+    .+..+++.   .. .+  .|..+.   +.+.+.....++
T Consensus       178 ~~VlV~G~-g~vG~~a~~~ak~~G~~~Vi~~~~~~~~----~~~~~~~G---a~-~~--i~~~~~~~~~~i~~~~~~~g~  246 (358)
T TIGR03451       178 DSVAVIGC-GGVGDAAIAGAALAGASKIIAVDIDDRK----LEWAREFG---AT-HT--VNSSGTDPVEAIRALTGGFGA  246 (358)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHH----HHHHHHcC---Cc-eE--EcCCCcCHHHHHHHHhCCCCC
Confidence            78999975 99999999888888985 8877653322    22223331   11 11  233332   223333332369


Q ss_pred             CEEEEccc
Q 025786          147 DAVMHFAA  154 (248)
Q Consensus       147 D~li~~Ag  154 (248)
                      |++|.+.|
T Consensus       247 d~vid~~g  254 (358)
T TIGR03451       247 DVVIDAVG  254 (358)
T ss_pred             CEEEECCC
Confidence            99999887

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=95.25  E-value=0.074  Score=45.43  Aligned_cols=33  Identities=27%  Similarity=0.127  Sum_probs=29.6

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNL  103 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~  103 (248)
                      .+++|.|++|.+|..++..+...|++|+.+.++
T Consensus       141 ~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~  173 (329)
T cd08250         141 ETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSS  173 (329)
T ss_pred             CEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCc
Confidence            789999999999999999888999999888753

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=95.23  E-value=0.065  Score=46.38  Aligned_cols=72  Identities=17%  Similarity=0.266  Sum_probs=44.5

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC-EEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-CCCCE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-NAFDA  148 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-~~iD~  148 (248)
                      ++|+|+|+ |++|...+..+...|+ +|+++++++.+    .+..+++.   ... +  .|..+ +++.+..+. +.+|+
T Consensus       171 ~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~----~~~a~~lG---a~~-v--i~~~~-~~~~~~~~~~g~~D~  238 (343)
T PRK09880        171 KRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRS----LSLAREMG---ADK-L--VNPQN-DDLDHYKAEKGYFDV  238 (343)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHH----HHHHHHcC---CcE-E--ecCCc-ccHHHHhccCCCCCE
Confidence            78999985 9999999988888898 58777754322    22333332   111 1  23332 223333332 45899


Q ss_pred             EEEccc
Q 025786          149 VMHFAA  154 (248)
Q Consensus       149 li~~Ag  154 (248)
                      +|.+.|
T Consensus       239 vid~~G  244 (343)
T PRK09880        239 SFEVSG  244 (343)
T ss_pred             EEECCC
Confidence            999987

>cd08290 ETR 2-enoyl thioester reductase (ETR)

Probab=95.21  E-value=0.13  Score=44.18  Aligned_cols=33  Identities=12%  Similarity=0.007  Sum_probs=30.0

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNL  103 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~  103 (248)
                      .+++|.|++|.+|..+++.+...|++|+++.+.
T Consensus       148 ~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~  180 (341)
T cd08290         148 DWVIQNGANSAVGQAVIQLAKLLGIKTINVVRD  180 (341)
T ss_pred             CEEEEccchhHHHHHHHHHHHHcCCeEEEEEcC
Confidence            799999999999999999999999999887653

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=95.18  E-value=0.077  Score=45.06  Aligned_cols=33  Identities=9%  Similarity=-0.000  Sum_probs=30.0

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNL  103 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~  103 (248)
                      .+++|.|++|.+|..+++.+...|++|+++.++
T Consensus       140 ~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~  172 (323)
T cd05282         140 DWVIQNAANSAVGRMLIQLAKLLGFKTINVVRR  172 (323)
T ss_pred             CEEEEcccccHHHHHHHHHHHHCCCeEEEEecC
Confidence            789999999999999999999999999887654

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=95.16  E-value=0.073  Score=45.40  Aligned_cols=32  Identities=28%  Similarity=0.268  Sum_probs=29.0

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEec
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDN  102 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r  102 (248)
                      .+++|+|++|.+|..+++.+...|++|+++.+
T Consensus       142 ~~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~  173 (334)
T PTZ00354        142 QSVLIHAGASGVGTAAAQLAEKYGAATIITTS  173 (334)
T ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC
Confidence            78999999999999999999999999877664

>KOG1494 consensus NAD-dependent malate dehydrogenase [Energy production and conversion]

Probab=95.16  E-value=0.54  Score=39.37  Aligned_cols=111  Identities=19%  Similarity=0.153  Sum_probs=63.9

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEE---EEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCC
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVT---IVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAF  146 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~---~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~i  146 (248)
                      +-+|.|.||+||||+-+...|. ....|.   +-|.....  .....+..+   ..+.  .....+-.++++++++  +.
T Consensus        28 ~~KVAvlGAaGGIGQPLSLLlK-~np~Vs~LaLYDi~~~~--GVaaDlSHI---~T~s--~V~g~~g~~~L~~al~--~a   97 (345)
T KOG1494|consen   28 GLKVAVLGAAGGIGQPLSLLLK-LNPLVSELALYDIANTP--GVAADLSHI---NTNS--SVVGFTGADGLENALK--GA   97 (345)
T ss_pred             cceEEEEecCCccCccHHHHHh-cCcccceeeeeecccCC--ccccccccc---CCCC--ceeccCChhHHHHHhc--CC
Confidence            3789999999999999987664 444332   22211111  001111111   1111  1123344568888887  78


Q ss_pred             CEEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEE
Q 025786          147 DAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI  192 (248)
Q Consensus       147 D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV  192 (248)
                      |+||--||+...  ...+.++.|..|......+..++.+.-+..+|
T Consensus        98 dvVvIPAGVPRK--PGMTRDDLFn~NAgIv~~l~~aia~~cP~A~i  141 (345)
T KOG1494|consen   98 DVVVIPAGVPRK--PGMTRDDLFNINAGIVKTLAAAIAKCCPNALI  141 (345)
T ss_pred             CEEEecCCCCCC--CCCcHHHhhhcchHHHHHHHHHHHhhCcccee
Confidence            999999997532  22344567777777777777777665444333

>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated

Probab=95.11  E-value=0.36  Score=42.79  Aligned_cols=31  Identities=39%  Similarity=0.474  Sum_probs=27.3

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC-EEEEEec
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDN  102 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~-~V~~~~r  102 (248)
                      .+|+|.| .||+|.++++.|+..|. +++++|.
T Consensus        43 ~~VlviG-~GGlGs~va~~La~~Gvg~i~lvD~   74 (392)
T PRK07878         43 ARVLVIG-AGGLGSPTLLYLAAAGVGTLGIVEF   74 (392)
T ss_pred             CCEEEEC-CCHHHHHHHHHHHHcCCCeEEEECC
Confidence            7899998 69999999999999997 7888874

>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []

Probab=95.11  E-value=0.16  Score=37.58  Aligned_cols=44  Identities=16%  Similarity=0.274  Sum_probs=32.1

Q ss_pred             EEEecCCchhHHHHHHHHHHCC--CEEEEEecCCCCcchhhhhhhhh
Q 025786           73 VLVTGGAGYIGSHAALRLLKDS--YRVTIVDNLSRGNIGAVKVLQEL  117 (248)
Q Consensus        73 vlITGasg~IG~~la~~L~~~G--~~V~~~~r~~~~~~~~~~~~~~~  117 (248)
                      |.|.|+||-||.....-+.+..  ++|+.+.- .++.+.+.+..+++
T Consensus         1 i~ILGsTGSIG~qtLdVi~~~~d~f~v~~Lsa-~~n~~~L~~q~~~f   46 (129)
T PF02670_consen    1 IAILGSTGSIGTQTLDVIRKHPDKFEVVALSA-GSNIEKLAEQAREF   46 (129)
T ss_dssp             EEEESTTSHHHHHHHHHHHHCTTTEEEEEEEE-SSTHHHHHHHHHHH
T ss_pred             CEEEcCCcHHHHHHHHHHHhCCCceEEEEEEc-CCCHHHHHHHHHHh
Confidence            5799999999999999998887  67876642 23444455555555

In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....

>cd08230 glucose_DH Glucose dehydrogenase

Probab=95.03  E-value=0.13  Score=44.63  Aligned_cols=74  Identities=22%  Similarity=0.321  Sum_probs=44.5

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li  150 (248)
                      .+|+|+|+ |++|...+..+...|++|++++++..+.+ ..+..+++.     +..+  |..+. ++.+......+|++|
T Consensus       174 ~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~~~~~~-~~~~~~~~G-----a~~v--~~~~~-~~~~~~~~~~~d~vi  243 (355)
T cd08230         174 RRALVLGA-GPIGLLAALLLRLRGFEVYVLNRRDPPDP-KADIVEELG-----ATYV--NSSKT-PVAEVKLVGEFDLII  243 (355)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCeEEEEecCCCCHH-HHHHHHHcC-----CEEe--cCCcc-chhhhhhcCCCCEEE
Confidence            78999985 99999999888888999999886321221 122233331     2222  32221 121111124689999


Q ss_pred             Eccc
Q 025786          151 HFAA  154 (248)
Q Consensus       151 ~~Ag  154 (248)
                      .+.|
T Consensus       244 d~~g  247 (355)
T cd08230         244 EATG  247 (355)
T ss_pred             ECcC
Confidence            9987

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase

Probab=95.02  E-value=0.085  Score=45.67  Aligned_cols=73  Identities=21%  Similarity=0.252  Sum_probs=44.4

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC-EEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCH---HHHHHHhhcCCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDA---KAVNKFFSENAF  146 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~---~~~~~~~~~~~i  146 (248)
                      .+++|+|+ |.+|..+++.+...|+ +|++++++..+    .+...++.   ...   ..|..+.   +.+.+.....++
T Consensus       174 ~~vlI~g~-g~vG~~a~q~a~~~G~~~v~~~~~~~~~----~~~~~~~g---a~~---~i~~~~~~~~~~l~~~~~~~~~  242 (351)
T cd08233         174 DTALVLGA-GPIGLLTILALKAAGASKIIVSEPSEAR----RELAEELG---ATI---VLDPTEVDVVAEVRKLTGGGGV  242 (351)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHH----HHHHHHhC---CCE---EECCCccCHHHHHHHHhCCCCC
Confidence            78999985 8999999999999999 78877643221    12222221   111   1233322   233333333359


Q ss_pred             CEEEEccc
Q 025786          147 DAVMHFAA  154 (248)
Q Consensus       147 D~li~~Ag  154 (248)
                      |++|++.|
T Consensus       243 d~vid~~g  250 (351)
T cd08233         243 DVSFDCAG  250 (351)
T ss_pred             CEEEECCC
Confidence            99999986

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.

>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases

Probab=95.01  E-value=0.1  Score=44.38  Aligned_cols=33  Identities=39%  Similarity=0.432  Sum_probs=29.4

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNL  103 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~  103 (248)
                      .+|+|.|++|.+|..++..+...|++|++++++
T Consensus       148 ~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~  180 (325)
T cd05280         148 GPVLVTGATGGVGSIAVAILAKLGYTVVALTGK  180 (325)
T ss_pred             CEEEEECCccHHHHHHHHHHHHcCCEEEEEeCC
Confidence            589999999999999999888899999888754

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so

>PLN00203 glutamyl-tRNA reductase

Probab=94.95  E-value=0.061  Score=49.35  Aligned_cols=73  Identities=15%  Similarity=0.210  Sum_probs=46.4

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCC-EEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~  148 (248)
                      .++|+|.|+ |.+|..+++.|...|+ +|+++.|+..+.   ......+.  +..+.+     ...+++.+.+.  ..|+
T Consensus       266 ~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era---~~La~~~~--g~~i~~-----~~~~dl~~al~--~aDV  332 (519)
T PLN00203        266 SARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERV---AALREEFP--DVEIIY-----KPLDEMLACAA--EADV  332 (519)
T ss_pred             CCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHH---HHHHHHhC--CCceEe-----ecHhhHHHHHh--cCCE
Confidence            389999997 9999999999999997 688888654332   22222221  111111     22334455554  5799


Q ss_pred             EEEcccc
Q 025786          149 VMHFAAV  155 (248)
Q Consensus       149 li~~Ag~  155 (248)
                      ||.+.+.
T Consensus       333 VIsAT~s  339 (519)
T PLN00203        333 VFTSTSS  339 (519)
T ss_pred             EEEccCC
Confidence            9987653

>cd01486 Apg7 Apg7 is an E1-like protein, that activates two different ubiquitin-like proteins, Apg12 and Apg8, and assigns them to specific E2 enzymes, Apg10 and Apg3, respectively

Probab=94.95  E-value=0.18  Score=42.81  Aligned_cols=30  Identities=37%  Similarity=0.526  Sum_probs=25.5

Q ss_pred             EEEEecCCchhHHHHHHHHHHCCC-EEEEEec
Q 025786           72 HVLVTGGAGYIGSHAALRLLKDSY-RVTIVDN  102 (248)
Q Consensus        72 ~vlITGasg~IG~~la~~L~~~G~-~V~~~~r  102 (248)
                      +|+|.| .|++|.++++.|+..|. +++++|.
T Consensus         1 kVLIvG-aGGLGs~vA~~La~aGVg~ItlvD~   31 (307)
T cd01486           1 KCLLLG-AGTLGCNVARNLLGWGVRHITFVDS   31 (307)
T ss_pred             CEEEEC-CCHHHHHHHHHHHHcCCCeEEEECC
Confidence            478887 68999999999999997 7888773

This leads to the covalent conjugation of Apg8 with phosphatidylethanolamine, an important step in autophagy. Autophagy is a dynamic membrane phenomenon for bulk protein degradation in the lysosome/vacuole.

>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=94.94  E-value=0.18  Score=43.50  Aligned_cols=32  Identities=31%  Similarity=0.317  Sum_probs=29.4

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEec
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDN  102 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r  102 (248)
                      .+++|+|++|.+|..++..+...|++|+++++
T Consensus       179 ~~vlI~g~~g~ig~~~~~~a~~~g~~vi~~~~  210 (350)
T cd08274         179 ETVLVTGASGGVGSALVQLAKRRGAIVIAVAG  210 (350)
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeC
Confidence            79999999999999999999999999988764

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>PRK08655 prephenate dehydrogenase; Provisional

Probab=94.94  E-value=0.036  Score=49.86  Aligned_cols=34  Identities=21%  Similarity=0.349  Sum_probs=30.8

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~  104 (248)
                      |+|.|.||+|.+|..+++.|.+.|++|++.+|+.
T Consensus         1 MkI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~   34 (437)
T PRK08655          1 MKISIIGGTGGLGKWFARFLKEKGFEVIVTGRDP   34 (437)
T ss_pred             CEEEEEecCCHHHHHHHHHHHHCCCEEEEEECCh
Confidence            4799999999999999999999999999998643

>cd01488 Uba3_RUB Ubiquitin activating enzyme (E1) subunit UBA3

Probab=94.93  E-value=0.13  Score=43.51  Aligned_cols=30  Identities=27%  Similarity=0.515  Sum_probs=25.6

Q ss_pred             EEEEecCCchhHHHHHHHHHHCCC-EEEEEec
Q 025786           72 HVLVTGGAGYIGSHAALRLLKDSY-RVTIVDN  102 (248)
Q Consensus        72 ~vlITGasg~IG~~la~~L~~~G~-~V~~~~r  102 (248)
                      +|+|.| .||+|.++++.|+..|. ++.++|.
T Consensus         1 kVlVVG-aGGlG~eilknLal~Gvg~I~IvD~   31 (291)
T cd01488           1 KILVIG-AGGLGCELLKNLALSGFRNIHVIDM   31 (291)
T ss_pred             CEEEEC-CCHHHHHHHHHHHHcCCCeEEEECC
Confidence            478887 79999999999999997 7778773

UBA3 is part of the heterodimeric activating enzyme (E1), specific for the Rub family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins. consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin(-like) by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by Rub family of ubiquitin-like proteins (Ublps) activates SCF ubiquitin ligases and is involved in cell cycle control, signaling and embryogenesis. UBA3 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1

Probab=94.92  E-value=0.035  Score=43.64  Aligned_cols=38  Identities=29%  Similarity=0.373  Sum_probs=29.8

Q ss_pred             EEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchh
Q 025786           72 HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGA  110 (248)
Q Consensus        72 ~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~  110 (248)
                      +|.|.|+ |.+|+.++..++..|++|++.+++....+..
T Consensus         1 ~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~   38 (180)
T PF02737_consen    1 KVAVIGA-GTMGRGIAALFARAGYEVTLYDRSPEALERA   38 (180)
T ss_dssp             EEEEES--SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHH
T ss_pred             CEEEEcC-CHHHHHHHHHHHhCCCcEEEEECChHHHHhh
Confidence            4778886 9999999999999999999999765443333

1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....

>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1

Probab=94.92  E-value=0.17  Score=43.59  Aligned_cols=73  Identities=21%  Similarity=0.289  Sum_probs=46.5

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li  150 (248)
                      .+++|+|++|.+|..+++.+...|++|+++.+. .    ..+..+++.   .. .  ..|..+.+....+....++|+++
T Consensus       164 ~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~-~----~~~~~~~~g---~~-~--~~~~~~~~~~~~l~~~~~vd~vi  232 (350)
T cd08248         164 KRVLILGGSGGVGTFAIQLLKAWGAHVTTTCST-D----AIPLVKSLG---AD-D--VIDYNNEDFEEELTERGKFDVIL  232 (350)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCeEEEEeCc-c----hHHHHHHhC---Cc-e--EEECCChhHHHHHHhcCCCCEEE
Confidence            899999999999999999999999998887642 1    122223321   11 1  12333333333333335699999


Q ss_pred             Eccc
Q 025786          151 HFAA  154 (248)
Q Consensus       151 ~~Ag  154 (248)
                      ++.|
T Consensus       233 ~~~g  236 (350)
T cd08248         233 DTVG  236 (350)
T ss_pred             ECCC
Confidence            9876

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt

Probab=94.87  E-value=0.56  Score=38.88  Aligned_cols=74  Identities=34%  Similarity=0.499  Sum_probs=52.4

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li  150 (248)
                      |+|||.|||+ =|+.++..|.++|+ |++..-.+...    +.   ..+.........+-+.+.+++.+++++.+++.||
T Consensus         1 m~ILvlgGTt-E~r~la~~L~~~g~-v~~sv~t~~g~----~~---~~~~~~~~~v~~G~lg~~~~l~~~l~~~~i~~vI   71 (249)
T PF02571_consen    1 MKILVLGGTT-EGRKLAERLAEAGY-VIVSVATSYGG----EL---LKPELPGLEVRVGRLGDEEGLAEFLRENGIDAVI   71 (249)
T ss_pred             CEEEEEechH-HHHHHHHHHHhcCC-EEEEEEhhhhH----hh---hccccCCceEEECCCCCHHHHHHHHHhCCCcEEE
Confidence            6899999886 58999999999998 55433111111    11   1011234566778888999999999988999999


Q ss_pred             Ecc
Q 025786          151 HFA  153 (248)
Q Consensus       151 ~~A  153 (248)
                      ...
T Consensus        72 DAT   74 (249)
T PF02571_consen   72 DAT   74 (249)
T ss_pred             ECC
Confidence            864

Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=94.85  E-value=0.11  Score=43.95  Aligned_cols=74  Identities=20%  Similarity=0.252  Sum_probs=46.4

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li  150 (248)
                      .+++|.|++|.+|..+++.+...|++|+.+.++..+    .+.+.++   +.. .++..+-...+.+.+.  ..++|.++
T Consensus       144 ~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~----~~~~~~~---g~~-~~~~~~~~~~~~i~~~--~~~~d~vl  213 (320)
T cd08243         144 DTLLIRGGTSSVGLAALKLAKALGATVTATTRSPER----AALLKEL---GAD-EVVIDDGAIAEQLRAA--PGGFDKVL  213 (320)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHH----HHHHHhc---CCc-EEEecCccHHHHHHHh--CCCceEEE
Confidence            799999999999999999999999999887643221    2222222   111 1111111112334444  34699999


Q ss_pred             Eccc
Q 025786          151 HFAA  154 (248)
Q Consensus       151 ~~Ag  154 (248)
                      ++.|
T Consensus       214 ~~~~  217 (320)
T cd08243         214 ELVG  217 (320)
T ss_pred             ECCC
Confidence            9876

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=94.85  E-value=0.083  Score=46.27  Aligned_cols=72  Identities=24%  Similarity=0.281  Sum_probs=43.6

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC-EEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHH---HHHHHhhcCCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAK---AVNKFFSENAF  146 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~---~~~~~~~~~~i  146 (248)
                      .+|+|+| +|+||..++..+...|+ +|+++++++.+    .+..+++.   .. .+  .|..+.+   .+.+... +++
T Consensus       193 ~~VlV~G-~G~vG~~a~~lak~~G~~~Vi~~~~~~~r----~~~a~~~G---a~-~~--i~~~~~~~~~~i~~~~~-~g~  260 (371)
T cd08281         193 QSVAVVG-LGGVGLSALLGAVAAGASQVVAVDLNEDK----LALARELG---AT-AT--VNAGDPNAVEQVRELTG-GGV  260 (371)
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHcCCCcEEEEcCCHHH----HHHHHHcC---Cc-eE--eCCCchhHHHHHHHHhC-CCC
Confidence            7899998 49999999888888899 58887643322    12223321   11 11  2333322   2333322 368


Q ss_pred             CEEEEccc
Q 025786          147 DAVMHFAA  154 (248)
Q Consensus       147 D~li~~Ag  154 (248)
                      |++|.+.|
T Consensus       261 d~vid~~G  268 (371)
T cd08281         261 DYAFEMAG  268 (371)
T ss_pred             CEEEECCC
Confidence            99999886

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional

Probab=94.84  E-value=0.095  Score=44.73  Aligned_cols=76  Identities=12%  Similarity=0.037  Sum_probs=46.7

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCC-HHHHHHHhhcCCCCEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD-AKAVNKFFSENAFDAV  149 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~iD~l  149 (248)
                      .+++|.|++|.+|..+++.+...|++|+.+++...+    .+.++++   +.. .++..+-.+ .+.+.++....++|++
T Consensus       142 ~~vlI~g~~g~ig~~~~~lak~~G~~v~~~~~~~~~----~~~~~~~---g~~-~~~~~~~~~~~~~~~~~~~~~~~d~v  213 (327)
T PRK10754        142 EQFLFHAAAGGVGLIACQWAKALGAKLIGTVGSAQK----AQRAKKA---GAW-QVINYREENIVERVKEITGGKKVRVV  213 (327)
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHcCCEEEEEeCCHHH----HHHHHHC---CCC-EEEcCCCCcHHHHHHHHcCCCCeEEE
Confidence            789999999999999998888999999887643221    1222222   111 222222111 2234444333468999


Q ss_pred             EEccc
Q 025786          150 MHFAA  154 (248)
Q Consensus       150 i~~Ag  154 (248)
                      +++.|
T Consensus       214 l~~~~  218 (327)
T PRK10754        214 YDSVG  218 (327)
T ss_pred             EECCc
Confidence            98865

>PLN02383 aspartate semialdehyde dehydrogenase

Probab=94.83  E-value=0.54  Score=40.92  Aligned_cols=26  Identities=19%  Similarity=0.307  Sum_probs=23.9

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYR   96 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~   96 (248)
                      .+|.|.||||++|.++++.|.++++.
T Consensus         8 ~kVaVvGAtG~vG~eLlrlL~~~~hP   33 (344)
T PLN02383          8 PSVAIVGVTGAVGQEFLSVLTDRDFP   33 (344)
T ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCC
Confidence            68999999999999999999998873

>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD)

Probab=94.81  E-value=0.12  Score=44.48  Aligned_cols=33  Identities=21%  Similarity=0.257  Sum_probs=30.1

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNL  103 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~  103 (248)
                      .+++|.|+++.+|..++..+...|++|+++.++
T Consensus       167 ~~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~~~  199 (341)
T cd08297         167 DWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVG  199 (341)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence            799999999999999999999999999988743

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional

Probab=94.80  E-value=0.21  Score=43.90  Aligned_cols=80  Identities=14%  Similarity=0.216  Sum_probs=49.3

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHC--CCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccC----------------
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKD--SYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL----------------  131 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl----------------  131 (248)
                      ||+|.|.|+||.||......+.+.  .++|+.+.- ..+.+.+.+..+++.   ++..++ .|-                
T Consensus         1 mk~VaILGsTGSIG~~tL~vi~~~p~~f~VvaLaa-~~n~~~l~~q~~~f~---p~~v~i-~~~~~~~~l~~~l~~~~~~   75 (385)
T PRK05447          1 MKRITILGSTGSIGTQTLDVIRRNPDRFRVVALSA-GKNVELLAEQAREFR---PKYVVV-ADEEAAKELKEALAAAGIE   75 (385)
T ss_pred             CceEEEEcCChHHHHHHHHHHHhCccccEEEEEEc-CCCHHHHHHHHHHhC---CCEEEE-cCHHHHHHHHHhhccCCce
Confidence            589999999999999999888664  578887752 123333444444432   222222 111                


Q ss_pred             --CCHHHHHHHhhcCCCCEEEEccc
Q 025786          132 --GDAKAVNKFFSENAFDAVMHFAA  154 (248)
Q Consensus       132 --~~~~~~~~~~~~~~iD~li~~Ag  154 (248)
                        .-.+.+.++++...+|+|++...
T Consensus        76 v~~G~~~~~~l~~~~~vD~Vv~Ai~  100 (385)
T PRK05447         76 VLAGEEGLCELAALPEADVVVAAIV  100 (385)
T ss_pred             EEEChhHHHHHhcCCCCCEEEEeCc
Confidence              12445566665567899988754

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase

Probab=94.80  E-value=0.097  Score=43.92  Aligned_cols=73  Identities=18%  Similarity=0.196  Sum_probs=42.9

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCE-EEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCH-HHHHHHhhcCCCCE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYR-VTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDA-KAVNKFFSENAFDA  148 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~iD~  148 (248)
                      .+|+|.|+ |.||..++..+...|++ |++++++..+    .+..+++.   ... +  .|..+. +.+.+.....++|+
T Consensus       122 ~~VlV~G~-G~vG~~~~~~ak~~G~~~Vi~~~~~~~r----~~~a~~~G---a~~-~--i~~~~~~~~~~~~~~~~g~d~  190 (280)
T TIGR03366       122 RRVLVVGA-GMLGLTAAAAAAAAGAARVVAADPSPDR----RELALSFG---ATA-L--AEPEVLAERQGGLQNGRGVDV  190 (280)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHH----HHHHHHcC---CcE-e--cCchhhHHHHHHHhCCCCCCE
Confidence            78999986 89999999888888986 7776543221    22223331   111 1  122221 22333322236899


Q ss_pred             EEEccc
Q 025786          149 VMHFAA  154 (248)
Q Consensus       149 li~~Ag  154 (248)
                      +|.+.|
T Consensus       191 vid~~G  196 (280)
T TIGR03366       191 ALEFSG  196 (280)
T ss_pred             EEECCC
Confidence            999876

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.

>PRK04148 hypothetical protein; Provisional

Probab=94.79  E-value=0.041  Score=40.95  Aligned_cols=66  Identities=14%  Similarity=0.189  Sum_probs=44.7

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li  150 (248)
                      +++++.|..  -|.+++..|.+.|++|+++|.++..    .+..++     ..+.++..|+.+++-  ++-  .+.|.|+
T Consensus        18 ~kileIG~G--fG~~vA~~L~~~G~~ViaIDi~~~a----V~~a~~-----~~~~~v~dDlf~p~~--~~y--~~a~liy   82 (134)
T PRK04148         18 KKIVELGIG--FYFKVAKKLKESGFDVIVIDINEKA----VEKAKK-----LGLNAFVDDLFNPNL--EIY--KNAKLIY   82 (134)
T ss_pred             CEEEEEEec--CCHHHHHHHHHCCCEEEEEECCHHH----HHHHHH-----hCCeEEECcCCCCCH--HHH--hcCCEEE
Confidence            679999854  8888999999999999999965432    222222     146788999987642  111  1467776


Q ss_pred             E
Q 025786          151 H  151 (248)
Q Consensus       151 ~  151 (248)
                      -
T Consensus        83 s   83 (134)
T PRK04148         83 S   83 (134)
T ss_pred             E
Confidence            3

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=94.76  E-value=0.84  Score=41.81  Aligned_cols=33  Identities=27%  Similarity=0.175  Sum_probs=29.3

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~  104 (248)
                      .+++|.|+ |.+|...+..+...|++|++++++.
T Consensus       165 akVlViGa-G~iGl~Aa~~ak~lGA~V~v~d~~~  197 (511)
T TIGR00561       165 AKVLVIGA-GVAGLAAIGAANSLGAIVRAFDTRP  197 (511)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCH
Confidence            78999994 9999999999999999999988643

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]

Probab=94.74  E-value=0.5  Score=39.96  Aligned_cols=105  Identities=13%  Similarity=0.094  Sum_probs=60.3

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc---CCCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE---NAFD  147 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~---~~iD  147 (248)
                      ++++|.||+|-+|+-+-+--.-.|+.|+..+-+.   ++ ...++.......     ..|-.++.++.++++.   .++|
T Consensus       155 eTv~VSaAsGAvGql~GQ~Ak~~Gc~VVGsaGS~---EK-v~ll~~~~G~d~-----afNYK~e~~~~~aL~r~~P~GID  225 (343)
T KOG1196|consen  155 ETVFVSAASGAVGQLVGQFAKLMGCYVVGSAGSK---EK-VDLLKTKFGFDD-----AFNYKEESDLSAALKRCFPEGID  225 (343)
T ss_pred             CEEEEeeccchhHHHHHHHHHhcCCEEEEecCCh---hh-hhhhHhccCCcc-----ceeccCccCHHHHHHHhCCCcce
Confidence            8999999999999855444444699998865322   21 222222221111     1222333344444443   4699


Q ss_pred             EEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCC
Q 025786          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPE  204 (248)
Q Consensus       148 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~  204 (248)
                      +-+-|.|-..                  .-.++..|..+  +||+.-+-++.|....
T Consensus       226 iYfeNVGG~~------------------lDavl~nM~~~--gri~~CG~ISqYN~~~  262 (343)
T KOG1196|consen  226 IYFENVGGKM------------------LDAVLLNMNLH--GRIAVCGMISQYNLEN  262 (343)
T ss_pred             EEEeccCcHH------------------HHHHHHhhhhc--cceEeeeeehhccccC
Confidence            9999987320                  12244455544  5888877777776443

>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]

Probab=94.72  E-value=0.64  Score=38.12  Aligned_cols=109  Identities=18%  Similarity=0.239  Sum_probs=63.5

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC-EEEEEecCCCCcchhhhh---------------h-hhhcCCCCceEEEE-ccCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKV---------------L-QELFPEPGRLQFIY-ADLG  132 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~---------------~-~~~~~~~~~~~~~~-~Dl~  132 (248)
                      .+|+|.| -||+|++.++.|++.|. ++.++|-..-........               . +.+..-.+++++.. -|+-
T Consensus        31 ~~V~VvG-iGGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~~~~~f~  109 (263)
T COG1179          31 AHVCVVG-IGGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVTAINDFI  109 (263)
T ss_pred             CcEEEEe-cCchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEeehHhhh
Confidence            6788988 59999999999999997 777776321111111000               0 11111123344433 3455


Q ss_pred             CHHHHHHHhhcCCCCEEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecC
Q 025786          133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYG  201 (248)
Q Consensus       133 ~~~~~~~~~~~~~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g  201 (248)
                      +++.+++++.. .+|+||.+-=                 ++..-..++..|.+++.   -++||+++-+
T Consensus       110 t~en~~~~~~~-~~DyvIDaiD-----------------~v~~Kv~Li~~c~~~ki---~vIss~Gag~  157 (263)
T COG1179         110 TEENLEDLLSK-GFDYVIDAID-----------------SVRAKVALIAYCRRNKI---PVISSMGAGG  157 (263)
T ss_pred             CHhHHHHHhcC-CCCEEEEchh-----------------hhHHHHHHHHHHHHcCC---CEEeeccccC
Confidence            67777777765 6898886421                 12223457788887764   3457766544

>PRK14852 hypothetical protein; Provisional

Probab=94.70  E-value=0.57  Score=45.99  Aligned_cols=78  Identities=13%  Similarity=0.204  Sum_probs=50.1

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC-EEEEEecCCCCcch-------------------hhhhhhhhcCCCCceEEEEcc
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIG-------------------AVKVLQELFPEPGRLQFIYAD  130 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~-~V~~~~r~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~D  130 (248)
                      .+|+|.| .||+|..+++.|+..|. +++++|...-...+                   +.+.++++.+ ..+++.+...
T Consensus       333 srVlVvG-lGGlGs~ia~~LAraGVG~I~L~D~D~Ve~SNLNRQ~l~~~~dIG~~Kaevaa~~l~~INP-~v~I~~~~~~  410 (989)
T PRK14852        333 SRVAIAG-LGGVGGIHLMTLARTGIGNFNLADFDAYSPVNLNRQYGASIASFGRGKLDVMTERALSVNP-FLDIRSFPEG  410 (989)
T ss_pred             CcEEEEC-CcHHHHHHHHHHHHcCCCeEEEEcCCEecccccccccCCChhhCCChHHHHHHHHHHHHCC-CCeEEEEecC
Confidence            7899998 78999999999999997 67777632111000                   1122233321 2355666666


Q ss_pred             CCCHHHHHHHhhcCCCCEEEEcc
Q 025786          131 LGDAKAVNKFFSENAFDAVMHFA  153 (248)
Q Consensus       131 l~~~~~~~~~~~~~~iD~li~~A  153 (248)
                      + +.+.+.++++  ++|+||.+.
T Consensus       411 I-~~en~~~fl~--~~DiVVDa~  430 (989)
T PRK14852        411 V-AAETIDAFLK--DVDLLVDGI  430 (989)
T ss_pred             C-CHHHHHHHhh--CCCEEEECC
Confidence            6 4466777776  689999653

>PLN02740 Alcohol dehydrogenase-like

Probab=94.69  E-value=0.13  Score=45.33  Aligned_cols=73  Identities=18%  Similarity=0.150  Sum_probs=45.1

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC-EEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCH-----HHHHHHhhcC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDA-----KAVNKFFSEN  144 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-----~~~~~~~~~~  144 (248)
                      .+|+|.|+ |.||..++..+...|+ +|++++++..+    .+..+++.   .. .++  |..+.     +.+.++.. +
T Consensus       200 ~~VlV~G~-G~vG~~a~q~ak~~G~~~Vi~~~~~~~r----~~~a~~~G---a~-~~i--~~~~~~~~~~~~v~~~~~-~  267 (381)
T PLN02740        200 SSVAIFGL-GAVGLAVAEGARARGASKIIGVDINPEK----FEKGKEMG---IT-DFI--NPKDSDKPVHERIREMTG-G  267 (381)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCcEEEEcCChHH----HHHHHHcC---Cc-EEE--ecccccchHHHHHHHHhC-C
Confidence            79999985 9999999998888998 58888754322    22223331   11 122  33221     22333332 3


Q ss_pred             CCCEEEEcccc
Q 025786          145 AFDAVMHFAAV  155 (248)
Q Consensus       145 ~iD~li~~Ag~  155 (248)
                      ++|++|.+.|.
T Consensus       268 g~dvvid~~G~  278 (381)
T PLN02740        268 GVDYSFECAGN  278 (381)
T ss_pred             CCCEEEECCCC
Confidence            69999999883

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=94.65  E-value=0.18  Score=43.99  Aligned_cols=72  Identities=18%  Similarity=0.222  Sum_probs=44.4

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li  150 (248)
                      ++|+|.| +|+||..++..+...|++|++++.+..+.   .+..+++   +.. .+  .|..+.+.+.+..  +++|++|
T Consensus       185 ~~VlV~G-~G~vG~~avq~Ak~~Ga~vi~~~~~~~~~---~~~~~~~---Ga~-~v--i~~~~~~~~~~~~--~~~D~vi  252 (360)
T PLN02586        185 KHLGVAG-LGGLGHVAVKIGKAFGLKVTVISSSSNKE---DEAINRL---GAD-SF--LVSTDPEKMKAAI--GTMDYII  252 (360)
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcchh---hhHHHhC---CCc-EE--EcCCCHHHHHhhc--CCCCEEE
Confidence            7899976 59999999998888999988876433221   1122222   111 11  1333334444433  2589999


Q ss_pred             Eccc
Q 025786          151 HFAA  154 (248)
Q Consensus       151 ~~Ag  154 (248)
                      .+.|
T Consensus       253 d~~g  256 (360)
T PLN02586        253 DTVS  256 (360)
T ss_pred             ECCC
Confidence            8876

>PRK07411 hypothetical protein; Validated

Probab=94.62  E-value=0.53  Score=41.74  Aligned_cols=78  Identities=23%  Similarity=0.282  Sum_probs=48.8

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC-EEEEEecCCCCcch-------------------hhhhhhhhcCCCCceEEEEcc
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIG-------------------AVKVLQELFPEPGRLQFIYAD  130 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~-~V~~~~r~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~D  130 (248)
                      .+|+|.| .||+|.++++.|+..|. +++++|...-....                   +.+.++++.+ ..+++.+...
T Consensus        39 ~~VlivG-~GGlG~~va~~La~~Gvg~l~lvD~D~ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~~np-~v~v~~~~~~  116 (390)
T PRK07411         39 ASVLCIG-TGGLGSPLLLYLAAAGIGRIGIVDFDVVDSSNLQRQVIHGTSWVGKPKIESAKNRILEINP-YCQVDLYETR  116 (390)
T ss_pred             CcEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCEecccccCcCcccChHHCCCcHHHHHHHHHHHHCC-CCeEEEEecc
Confidence            7899998 68999999999999997 77787743111111                   1122222221 2345556656


Q ss_pred             CCCHHHHHHHhhcCCCCEEEEcc
Q 025786          131 LGDAKAVNKFFSENAFDAVMHFA  153 (248)
Q Consensus       131 l~~~~~~~~~~~~~~iD~li~~A  153 (248)
                      ++. +...+++.  ..|+||.+.
T Consensus       117 ~~~-~~~~~~~~--~~D~Vvd~~  136 (390)
T PRK07411        117 LSS-ENALDILA--PYDVVVDGT  136 (390)
T ss_pred             cCH-HhHHHHHh--CCCEEEECC
Confidence            654 34556665  579998765

>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional

Probab=94.61  E-value=0.45  Score=42.54  Aligned_cols=35  Identities=29%  Similarity=0.320  Sum_probs=30.3

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCC
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSR  105 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~  105 (248)
                      +++|.|.| .|.+|..++..|+++|++|+++++++.
T Consensus         3 ~~kI~VIG-lG~~G~~~A~~La~~G~~V~~~D~~~~   37 (415)
T PRK11064          3 FETISVIG-LGYIGLPTAAAFASRQKQVIGVDINQH   37 (415)
T ss_pred             ccEEEEEC-cchhhHHHHHHHHhCCCEEEEEeCCHH
Confidence            36788887 699999999999999999999996543

>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase

Probab=94.61  E-value=0.55  Score=37.27  Aligned_cols=36  Identities=25%  Similarity=0.250  Sum_probs=32.4

Q ss_pred             CCCCceEEEEecCCchhHHHHHHHHHHCCCEEEEEec
Q 025786           66 HEEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDN  102 (248)
Q Consensus        66 ~~~~~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r  102 (248)
                      ...| |+|+|.|.|.-+|+-++..|.++|+.|++++.
T Consensus        59 ~l~G-K~vvVIGrS~iVGkPla~lL~~~~AtVti~~~   94 (197)
T cd01079          59 RLYG-KTITIINRSEVVGRPLAALLANDGARVYSVDI   94 (197)
T ss_pred             CCCC-CEEEEECCCccchHHHHHHHHHCCCEEEEEec
Confidence            3455 99999999999999999999999999999863

The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.59  E-value=0.15  Score=43.37  Aligned_cols=34  Identities=32%  Similarity=0.517  Sum_probs=31.3

Q ss_pred             CCceEEEEecCCchhHHHHHHHHHHCCCEEEEEec
Q 025786           68 EGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDN  102 (248)
Q Consensus        68 ~~~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r  102 (248)
                      .| |+|.|.|.++-+|+.++..|.++|+.|+++.+
T Consensus       158 ~G-k~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~  191 (301)
T PRK14194        158 TG-KHAVVIGRSNIVGKPMAALLLQAHCSVTVVHS  191 (301)
T ss_pred             CC-CEEEEECCCCccHHHHHHHHHHCCCEEEEECC
Confidence            45 99999999999999999999999999999864

>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional

Probab=94.58  E-value=0.15  Score=44.14  Aligned_cols=76  Identities=25%  Similarity=0.258  Sum_probs=45.2

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCE-EEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCC-E
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYR-VTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFD-A  148 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD-~  148 (248)
                      ++++|+| +|.+|..++..+...|++ |++++++..+    .+..+++.   .. .++..+-.+.+.+.+.....++| +
T Consensus       162 ~~vlV~G-~g~vG~~~~~~a~~~G~~~v~~~~~~~~~----~~~~~~~G---a~-~~i~~~~~~~~~~~~~~~~~~~d~~  232 (347)
T PRK10309        162 KNVIIIG-AGTIGLLAIQCAVALGAKSVTAIDINSEK----LALAKSLG---AM-QTFNSREMSAPQIQSVLRELRFDQL  232 (347)
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCCHHH----HHHHHHcC---Cc-eEecCcccCHHHHHHHhcCCCCCeE
Confidence            7999997 599999999988889997 5666543221    22223331   11 12222211234455554444678 8


Q ss_pred             EEEcccc
Q 025786          149 VMHFAAV  155 (248)
Q Consensus       149 li~~Ag~  155 (248)
                      +|.++|.
T Consensus       233 v~d~~G~  239 (347)
T PRK10309        233 ILETAGV  239 (347)
T ss_pred             EEECCCC
Confidence            8888873

>PRK13886 conjugal transfer protein TraL; Provisional

Probab=94.58  E-value=0.73  Score=37.97  Aligned_cols=80  Identities=16%  Similarity=0.137  Sum_probs=45.3

Q ss_pred             eEEEEecCCchhHHHH-----HHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEcc---CCCHHHHHHHhh
Q 025786           71 THVLVTGGAGYIGSHA-----ALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYAD---LGDAKAVNKFFS  142 (248)
Q Consensus        71 k~vlITGasg~IG~~l-----a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D---l~~~~~~~~~~~  142 (248)
                      ++++|.++-||+|+..     +..|+++|.+|.++|-.+.+.. ... ...+.  ...+.+...|   ..+.+.+.+.+.
T Consensus         3 ~i~~i~~~KGGvGKSt~a~~la~~l~~~g~~vl~iD~D~~n~~-~~~-~~~l~--~~~~~i~~~~~i~~r~fD~Lve~i~   78 (241)
T PRK13886          3 KIHMVLQGKGGVGKSFIAATIAQYKASKGQKPLCIDTDPVNAT-FEG-YKALN--VRRLNIMDGDEINTRNFDALVEMIA   78 (241)
T ss_pred             eEEEEecCCCCCcHHHHHHHHHHHHHhCCCCEEEEECCCCCch-hhh-HHhcC--CcceecccCCccchhhHHHHHHHHh
Confidence            6788999999999877     5566778999999985433221 111 11111  1123332222   223444433333


Q ss_pred             cCCCCEEEEccc
Q 025786          143 ENAFDAVMHFAA  154 (248)
Q Consensus       143 ~~~iD~li~~Ag  154 (248)
                      ..+.|+||.|.+
T Consensus        79 ~~~~dvIIDngA   90 (241)
T PRK13886         79 STEGDVIIDNGA   90 (241)
T ss_pred             ccCCCEEEECCC
Confidence            345689998875

>PRK14851 hypothetical protein; Provisional

Probab=94.57  E-value=0.22  Score=47.26  Aligned_cols=78  Identities=18%  Similarity=0.222  Sum_probs=51.1

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC-EEEEEecCC-------CCc------------chhhhhhhhhcCCCCceEEEEcc
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLS-------RGN------------IGAVKVLQELFPEPGRLQFIYAD  130 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~-~V~~~~r~~-------~~~------------~~~~~~~~~~~~~~~~~~~~~~D  130 (248)
                      .+|+|.| .||+|.+++..|+..|. +++++|...       +..            +...+.+.++.+ ..+++.+...
T Consensus        44 ~~VlIvG-~GGlGs~va~~Lar~GVG~l~LvD~D~ve~sNLNRQ~~~~~~dvG~~Kv~v~~~~l~~inP-~~~I~~~~~~  121 (679)
T PRK14851         44 AKVAIPG-MGGVGGVHLITMVRTGIGRFHIADFDQFEPVNVNRQFGARVPSFGRPKLAVMKEQALSINP-FLEITPFPAG  121 (679)
T ss_pred             CeEEEEC-cCHHHHHHHHHHHHhCCCeEEEEcCCEecccccccCcCcChhhCCCHHHHHHHHHHHHhCC-CCeEEEEecC
Confidence            7899998 79999999999999997 677776321       110            001122223322 3356677777


Q ss_pred             CCCHHHHHHHhhcCCCCEEEEcc
Q 025786          131 LGDAKAVNKFFSENAFDAVMHFA  153 (248)
Q Consensus       131 l~~~~~~~~~~~~~~iD~li~~A  153 (248)
                      ++ .+.+.++++  ++|+||.+.
T Consensus       122 i~-~~n~~~~l~--~~DvVid~~  141 (679)
T PRK14851        122 IN-ADNMDAFLD--GVDVVLDGL  141 (679)
T ss_pred             CC-hHHHHHHHh--CCCEEEECC
Confidence            75 456777776  689998653

>PRK13303 L-aspartate dehydrogenase; Provisional

Probab=94.57  E-value=0.99  Score=37.76  Aligned_cols=31  Identities=32%  Similarity=0.306  Sum_probs=25.3

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHC-CCEEEEEe
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKD-SYRVTIVD  101 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~-G~~V~~~~  101 (248)
                      |++|.|.|. |.||+.+++++.+. +.++..+.
T Consensus         1 m~rVgIiG~-G~iG~~~~~~l~~~~~~~l~~v~   32 (265)
T PRK13303          1 MMKVAMIGF-GAIGAAVLELLEHDPDLRVDWVI   32 (265)
T ss_pred             CcEEEEECC-CHHHHHHHHHHhhCCCceEEEEE
Confidence            468999997 99999999999876 56766554

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=94.53  E-value=0.082  Score=39.06  Aligned_cols=30  Identities=23%  Similarity=0.274  Sum_probs=26.5

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEe
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVD  101 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~  101 (248)
                      .+|-|.|+ |-+|.++++.|.+.|++|..+.
T Consensus        11 l~I~iIGa-GrVG~~La~aL~~ag~~v~~v~   40 (127)
T PF10727_consen   11 LKIGIIGA-GRVGTALARALARAGHEVVGVY   40 (127)
T ss_dssp             -EEEEECT-SCCCCHHHHHHHHTTSEEEEES
T ss_pred             cEEEEECC-CHHHHHHHHHHHHCCCeEEEEE
Confidence            68999986 9999999999999999998874

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

Probab=94.47  E-value=0.16  Score=44.22  Aligned_cols=31  Identities=32%  Similarity=0.409  Sum_probs=27.4

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC-EEEEEec
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDN  102 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~-~V~~~~r  102 (248)
                      .++||+| +|++|..++..+...|+ +|+++++
T Consensus       179 ~~vlI~g-~g~vG~~~~~lak~~G~~~v~~~~~  210 (361)
T cd08231         179 DTVVVQG-AGPLGLYAVAAAKLAGARRVIVIDG  210 (361)
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcC
Confidence            7899997 69999999998888999 8888764

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=94.47  E-value=0.17  Score=44.37  Aligned_cols=72  Identities=15%  Similarity=0.108  Sum_probs=44.2

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC-EEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCC-H----HHHHHHhhcC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD-A----KAVNKFFSEN  144 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~----~~~~~~~~~~  144 (248)
                      .+|+|+|+ |+||...+..+...|+ +|++++++..+    .+..+++.   ...   ..|..+ .    +.+.++.. +
T Consensus       187 ~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~----~~~a~~~G---a~~---~i~~~~~~~~~~~~v~~~~~-~  254 (368)
T TIGR02818       187 DTVAVFGL-GGIGLSVIQGARMAKASRIIAIDINPAK----FELAKKLG---ATD---CVNPNDYDKPIQEVIVEITD-G  254 (368)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHH----HHHHHHhC---CCe---EEcccccchhHHHHHHHHhC-C
Confidence            78999975 9999999988888898 78888753322    22223331   111   123322 1    22333332 3


Q ss_pred             CCCEEEEccc
Q 025786          145 AFDAVMHFAA  154 (248)
Q Consensus       145 ~iD~li~~Ag  154 (248)
                      ++|++|.+.|
T Consensus       255 g~d~vid~~G  264 (368)
T TIGR02818       255 GVDYSFECIG  264 (368)
T ss_pred             CCCEEEECCC
Confidence            6999999987

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	248
1z45_A	699	Crystal Structure Of The Gal10 Fusion Protein Galac		4e-32
1hzj_A	348	Human Udp-Galactose 4-Epimerase: Accommodation Of U		8e-28
1ek5_A	348	Structure Of Human Udp-Galactose 4-Epimerase In Com		9e-28
1i3k_A	348	Molecular Basis For Severe Epimerase-Deficiency Gal		2e-27
1kvs_A	338	Udp-Galactose 4-Epimerase Complexed With Udp-Phenol		4e-27
2udp_A	338	Udp-Galactose 4-Epimerase Complexed With Udp-Phenol		9e-27
1lrk_A	338	Crystal Structure Of Escherichia Coli Udp-Galactose		1e-26
1lrj_A	338	Crystal Structure Of E. Coli Udp-Galactose 4-Epimer		1e-26
1kvr_A	338	Udp-Galactose 4-Epimerase Complexed With Udp-Phenol		2e-26
1kvt_A	338	Udp-Galactose 4-Epimerase Complexed With Udp-Phenol		2e-26
1kvq_A	338	Udp-Galactose 4-Epimerase Complexed With Udp-Phenol		2e-26
1kvu_A	338	Udp-Galactose 4-Epimerase Complexed With Udp-Phenol		2e-26
3enk_A	341	1.9a Crystal Structure Of Udp-Glucose 4-Epimerase F		3e-26
1a9y_A	338	Udp-Galactose 4-Epimerase Mutant S124aY149F COMPLEX		4e-26
1a9z_A	338	Udp-Galactose 4-Epimerase Mutant S124aY149F COMPLEX		4e-26
2c20_A	330	Crystal Structure Of Udp-Glucose 4-Epimerase Length		5e-26
1gy8_A	397	Trypanosoma Brucei Udp-Galactose 4' Epimerase Lengt		4e-21
3icp_A	312	Crystal Structure Of Udp-Galactose 4-Epimerase Leng		2e-17
3ehe_A	313	Crystal Structure Of Udp-Glucose 4 Epimerase (Gale-		2e-17
3aw9_A	308	Structure Of Udp-Galactose 4-Epimerase Mutant Lengt		2e-15
2p5u_A	311	Crystal Structure Of Thermus Thermophilus Hb8 Udp-G		6e-14
4egb_A	346	3.0 Angstrom Resolution Crystal Structure Of Dtdp-G		8e-14
1r6d_A	337	Crystal Structure Of Desiv Double Mutant (Dtdp-Gluc		4e-13
1r66_A	337	Crystal Structure Of Desiv (Dtdp-Glucose 4,6-Dehydr		5e-13
3vps_A	321	Structure Of A Novel Nad Dependent-Ndp-Hexosamine 5		6e-12
2hun_A	336	Crystal Structure Of Hypothetical Protein Ph0414 Fr		2e-11
2pzk_A	330	Crystal Structure Of The Bordetella Bronchiseptica		4e-11
4ef7_B	337	Udp-Xylose Synthase Length = 337		4e-11
1orr_A	347	Crystal Structure Of Cdp-tyvelose 2-epimerase Compl		5e-11
2b69_A	343	Crystal Structure Of Human Udp-Glucoronic Acid Deca		2e-10
1g1a_A	361	The Crystal Structure Of Dtdp-D-Glucose 4,6-Dehydra		3e-10
3ruc_A	351	Specific Recognition Of N-Acetylated Substrates And		3e-10
3lu1_A	364	Crystal Structure Analysis Of Wbgu: A Udp-Galnac 4-		4e-10
2q1w_A	333	Crystal Structure Of The Bordetella Bronchiseptica		4e-10
3ru9_A	351	Specific Recognition Of N-Acetylated Substrates And		4e-10
3ru7_A	351	Specific Recognition Of N-Acetylated Substrates And		4e-10
1sb8_A	352	Crystal Structure Of Pseudomonas Aeruginosa Udp-N-A		6e-10
1bxk_A	355	Dtdp-Glucose 4,6-Dehydratase From E. Coli Length =		4e-09
2pk3_A	321	Crystal Structure Of A Gdp-4-Keto-6-Deoxy-D-Mannose		1e-08
1t2a_A	375	Crystal Structure Of Human Gdp-D-Mannose 4,6-Dehydr		2e-08
1kep_A	348	The Crystal Structure Of Dtdp-D-Glucose 4,6-Dehydra		3e-08
2z1m_A	345	Crystal Structure Of Gdp-D-Mannose Dehydratase From		4e-08
1db3_A	372	E.Coli Gdp-Mannose 4,6-Dehydratase Length = 372		8e-07
4id9_A	347	Crystal Structure Of A Short-Chain DehydrogenaseRED		3e-06
2hrz_A	342	The Crystal Structure Of The Nucleoside-diphosphate		5e-06
1rpn_A	335	Crystal Structure Of Gdp-D-Mannose 4,6-Dehydratase		7e-06
3a1n_A	317	Crystal Structure Of L-Threonine Dehydrogenase From		1e-05
3a9w_A	317	Crystal Structure Of L-Threonine Bound L-Threonine		3e-05
1i24_A	404	High Resolution Crystal Structure Of The Wild-Type		7e-05
1qrr_A	394	Crystal Structure Of Sqd1 Protein Complex With Nad		8e-05
2pzj_A	377	Crystal Structure Of The Bordetella Bronchiseptica		2e-04
1i2b_A	404	Crystal Structure Of Mutant T145a Sqd1 Protein Comp		3e-04
2c29_D	337	Structure Of Dihydroflavonol Reductase From Vitis V		6e-04

>pdb|1Z45|A Chain A, Crystal Structure Of The Gal10 Fusion Protein Galactose MutarotaseUDP-Galactose 4-Epimerase From Saccharomyces Cerevisiae Complexed With Nad, Udp-Glucose, And Galactose Length = 699

Iteration: 1
 Score =  134 bits (338), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 76/179 (42%), Positives = 100/179 (55%), Gaps = 7/179 (3%)
Query: 65  QHEEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRL 124
           Q E     VLVTGGAGYIGSH  + L+++ Y   + DNLS     +V  L+ L      +
Sbjct: 6   QSESTSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKH--HI 63
Query: 125 QFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMA 184
            F   DL D K + K F E   D+V+HFA +  VGEST  PL+YYHN    T+V+LE M 
Sbjct: 64  PFYEVDLCDRKGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQ 123
Query: 185 RHGVDTLIYSSTCATYGE----PEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSD 239
           ++ V   ++SS+   YG+    P  +PI EE P  P NPYG  K   E+I+ D   NSD
Sbjct: 124 QYNVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYAIENILNDLY-NSD 181

>pdb|1HZJ|A Chain A, Human Udp-Galactose 4-Epimerase: Accommodation Of Udp-N- Acetylglucosamine Within The Active Site Length = 348

Iteration: 1
 Score =  120 bits (300), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 68/169 (40%), Positives = 96/169 (56%), Gaps = 5/169 (2%)
Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS---RGNIGAVKVLQELFPEPGR-LQFIY 128
           VLVTGGAGYIGSH  L LL+  Y   ++DN     RG     + L+ +    GR ++F  
Sbjct: 5   VLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEE 64
Query: 129 ADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV 188
            D+ D  A+ + F + +F AV+HFA +  VGES   PL YY    + T+ +LE M  HGV
Sbjct: 65  MDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGV 124
Query: 189 DTLIYSSTCATYGEPEKMPITEETPQAPI-NPYGKAKKMAEDIILDFSK 236
             L++SS+   YG P+ +P+ E  P     NPYGK+K   E++I D  +
Sbjct: 125 KNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQ 173

>pdb|1EK5|A Chain A, Structure Of Human Udp-Galactose 4-Epimerase In Complex With Nad+ Length = 348

Iteration: 1
 Score =  120 bits (300), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 68/169 (40%), Positives = 96/169 (56%), Gaps = 5/169 (2%)
Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS---RGNIGAVKVLQELFPEPGR-LQFIY 128
           VLVTGGAGYIGSH  L LL+  Y   ++DN     RG     + L+ +    GR ++F  
Sbjct: 5   VLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEE 64
Query: 129 ADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV 188
            D+ D  A+ + F + +F AV+HFA +  VGES   PL YY    + T+ +LE M  HGV
Sbjct: 65  MDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGV 124
Query: 189 DTLIYSSTCATYGEPEKMPITEETPQAPI-NPYGKAKKMAEDIILDFSK 236
             L++SS+   YG P+ +P+ E  P     NPYGK+K   E++I D  +
Sbjct: 125 KNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQ 173

>pdb|1I3K|A Chain A, Molecular Basis For Severe Epimerase-Deficiency Galactosemia: X-Ray Structure Of The Human V94m- Substituted Udp-Galactose 4-Epimerase Length = 348

Iteration: 1
 Score =  119 bits (297), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 67/169 (39%), Positives = 96/169 (56%), Gaps = 5/169 (2%)
Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS---RGNIGAVKVLQELFPEPGR-LQFIY 128
           VLVTGGAGYIGSH  L LL+  Y   ++DN     RG     + L+ +    GR ++F  
Sbjct: 5   VLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEE 64
Query: 129 ADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV 188
            D+ D  A+ + F + +F AV+HFA +  +GES   PL YY    + T+ +LE M  HGV
Sbjct: 65  MDILDQGALQRLFKKYSFMAVIHFAGLKAMGESVQKPLDYYRVNLTGTIQLLEIMKAHGV 124
Query: 189 DTLIYSSTCATYGEPEKMPITEETPQAPI-NPYGKAKKMAEDIILDFSK 236
             L++SS+   YG P+ +P+ E  P     NPYGK+K   E++I D  +
Sbjct: 125 KNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQ 173

>pdb|1KVS|A Chain A, Udp-Galactose 4-Epimerase Complexed With Udp-Phenol Length = 338

Iteration: 1
 Score =  117 bits (294), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 63/165 (38%), Positives = 94/165 (56%), Gaps = 3/165 (1%)
Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           VLVTGG+GYIGSH  ++LL++ + V I+DNL       + V++ L  +     F+  D+ 
Sbjct: 3   VLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGK--HPTFVEGDIR 60
Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
           +   + +   ++A D V+HFA +  VGES   PL+YY N  + TL ++ +M    V   I
Sbjct: 61  NEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFI 120
Query: 193 YSSTCATYGEPEKMPITEETPQA-PINPYGKAKKMAEDIILDFSK 236
           +SST   YG+  K+P  E  P   P +PYGK+K M E I+ D  K
Sbjct: 121 FSSTATVYGDNPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQK 165

>pdb|2UDP|A Chain A, Udp-Galactose 4-Epimerase Complexed With Udp-Phenol Length = 338

Iteration: 1
 Score =  117 bits (292), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 62/165 (37%), Positives = 94/165 (56%), Gaps = 3/165 (1%)
Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           VLVTGG+GYIGSH  ++LL++ + V I+DNL       + V++ L  +     F+  D+ 
Sbjct: 3   VLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGK--HPTFVEGDIR 60
Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
           +   + +   ++A D V+HFA +  VGES   PL+YY N  + TL ++ +M    V   I
Sbjct: 61  NEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFI 120
Query: 193 YSSTCATYGEPEKMPITEETPQA-PINPYGKAKKMAEDIILDFSK 236
           +SS+   YG+  K+P  E  P   P +PYGK+K M E I+ D  K
Sbjct: 121 FSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQK 165

>pdb|1LRK|A Chain A, Crystal Structure Of Escherichia Coli Udp-Galactose 4-Epimerase Mutant Y299c Complexed With Udp-N-Acetylglucosamine Length = 338

Iteration: 1
 Score =  116 bits (291), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 62/165 (37%), Positives = 94/165 (56%), Gaps = 3/165 (1%)
Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           VLVTGG+GYIGSH  ++LL++ + V I+DNL       + V++ L  +     F+  D+ 
Sbjct: 3   VLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGK--HPTFVEGDIR 60
Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
           +   + +   ++A D V+HFA +  VGES   PL+YY N  + TL ++ +M    V   I
Sbjct: 61  NEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFI 120
Query: 193 YSSTCATYGEPEKMPITEETPQA-PINPYGKAKKMAEDIILDFSK 236
           +SS+   YG+  K+P  E  P   P +PYGK+K M E I+ D  K
Sbjct: 121 FSSSATVYGDNPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQK 165

>pdb|1LRJ|A Chain A, Crystal Structure Of E. Coli Udp-Galactose 4-Epimerase Complexed With Udp-N-Acetylglucosamine Length = 338

Iteration: 1
 Score =  116 bits (291), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 62/165 (37%), Positives = 94/165 (56%), Gaps = 3/165 (1%)
Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           VLVTGG+GYIGSH  ++LL++ + V I+DNL       + V++ L  +     F+  D+ 
Sbjct: 3   VLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGK--HPTFVEGDIR 60
Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
           +   + +   ++A D V+HFA +  VGES   PL+YY N  + TL ++ +M    V   I
Sbjct: 61  NEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFI 120
Query: 193 YSSTCATYGEPEKMPITEETPQA-PINPYGKAKKMAEDIILDFSK 236
           +SS+   YG+  K+P  E  P   P +PYGK+K M E I+ D  K
Sbjct: 121 FSSSATVYGDNPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQK 165

>pdb|1KVR|A Chain A, Udp-Galactose 4-Epimerase Complexed With Udp-Phenol Length = 338

Iteration: 1
 Score =  116 bits (290), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 62/165 (37%), Positives = 93/165 (56%), Gaps = 3/165 (1%)
Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           VLVTGG+GYIGSH  ++LL++ + V I+DNL       + V++ L  +     F+  D+ 
Sbjct: 3   VLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGK--HPTFVEGDIR 60
Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
           +   + +   ++A D V+HFA +  VGES   PL+YY N  + TL ++ +M    V   I
Sbjct: 61  NEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFI 120
Query: 193 YSSTCATYGEPEKMPITEETPQA-PINPYGKAKKMAEDIILDFSK 236
           +SS    YG+  K+P  E  P   P +PYGK+K M E I+ D  K
Sbjct: 121 FSSAATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQK 165

>pdb|1KVT|A Chain A, Udp-Galactose 4-Epimerase Complexed With Udp-Phenol Length = 338

Iteration: 1
 Score =  115 bits (289), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 62/165 (37%), Positives = 93/165 (56%), Gaps = 3/165 (1%)
Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           VLVTGG+GYIGSH  ++LL++ + V I+DNL       + V++ L  +     F+  D+ 
Sbjct: 3   VLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGK--HPTFVEGDIR 60
Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
           +   + +   ++A D V+HFA +  VGES   PL+YY N  + TL ++ +M    V   I
Sbjct: 61  NEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFI 120
Query: 193 YSSTCATYGEPEKMPITEETPQA-PINPYGKAKKMAEDIILDFSK 236
           +SS    YG+  K+P  E  P   P +PYGK+K M E I+ D  K
Sbjct: 121 FSSVATVYGDNPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQK 165

>pdb|1KVQ|A Chain A, Udp-Galactose 4-Epimerase Complexed With Udp-Phenol Length = 338

Iteration: 1
 Score =  115 bits (289), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 62/165 (37%), Positives = 93/165 (56%), Gaps = 3/165 (1%)
Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           VLVTGG+GYIGSH  ++LL++ + V I+DNL       + V++ L  +     F+  D+ 
Sbjct: 3   VLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGK--HPTFVEGDIR 60
Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
           +   + +   ++A D V+HFA +  VGES   PL+YY N  + TL ++ +M    V   I
Sbjct: 61  NEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFI 120
Query: 193 YSSTCATYGEPEKMPITEETPQA-PINPYGKAKKMAEDIILDFSK 236
           +SS    YG+  K+P  E  P   P +PYGK+K M E I+ D  K
Sbjct: 121 FSSAATVYGDNPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQK 165

>pdb|1KVU|A Chain A, Udp-Galactose 4-Epimerase Complexed With Udp-Phenol Length = 338

Iteration: 1
 Score =  115 bits (288), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 61/165 (36%), Positives = 94/165 (56%), Gaps = 3/165 (1%)
Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           VLVTGG+GYIGSH  ++LL++ + V I+DNL       + V++ L  +     F+  D+ 
Sbjct: 3   VLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGK--HPTFVEGDIR 60
Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
           +   + +   ++A D V+HFA +  VGES   PL+YY N  + TL ++ +M    V   I
Sbjct: 61  NEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFI 120
Query: 193 YSSTCATYGEPEKMPITEETPQA-PINPYGKAKKMAEDIILDFSK 236
           +SS+   YG+  K+P  E  P   P +P+GK+K M E I+ D  K
Sbjct: 121 FSSSATVYGDQPKIPYVESFPTGTPQSPFGKSKLMVEQILTDLQK 165

>pdb|3ENK|A Chain A, 1.9a Crystal Structure Of Udp-Glucose 4-Epimerase From Burkholderia Pseudomallei Length = 341

Iteration: 1
 Score =  114 bits (286), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 65/162 (40%), Positives = 92/162 (56%), Gaps = 4/162 (2%)
Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRL-QFIYADL 131
           +LVTGGAGYIGSH A+ LL   Y V I DNL      A+  ++++    G+   F   D+
Sbjct: 8   ILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKIT---GKTPAFHETDV 64
Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTL 191
            D +A+ + F  +   A +HFAA+  VGES   P++YY N   + L +L  M    V  +
Sbjct: 65  SDERALARIFDAHPITAAIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAVKRI 124
Query: 192 IYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILD 233
           ++SS+   YG PE+ PI E  P +  NPYG+ K MAE I+ D
Sbjct: 125 VFSSSATVYGVPERSPIDETFPLSATNPYGQTKLMAEQILRD 166

>pdb|1A9Y|A Chain A, Udp-Galactose 4-Epimerase Mutant S124aY149F COMPLEXED WITH UDP- Glucose Length = 338

Iteration: 1
 Score =  114 bits (286), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 61/165 (36%), Positives = 93/165 (56%), Gaps = 3/165 (1%)
Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           VLVTGG+GYIGSH  ++LL++ + V I+DNL       + V++ L  +     F+  D+ 
Sbjct: 3   VLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGK--HPTFVEGDIR 60
Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
           +   + +   ++A D V+HFA +  VGES   PL+YY N  + TL ++ +M    V   I
Sbjct: 61  NEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFI 120
Query: 193 YSSTCATYGEPEKMPITEETPQA-PINPYGKAKKMAEDIILDFSK 236
           +SS    YG+  K+P  E  P   P +P+GK+K M E I+ D  K
Sbjct: 121 FSSAATVYGDQPKIPYVESFPTGTPQSPFGKSKLMVEQILTDLQK 165

>pdb|1A9Z|A Chain A, Udp-Galactose 4-Epimerase Mutant S124aY149F COMPLEXED WITH UDP- Galactose Length = 338

Iteration: 1
 Score =  114 bits (285), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 61/165 (36%), Positives = 93/165 (56%), Gaps = 3/165 (1%)
Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           VLVTGG+GYIGSH  ++LL++ + V I+DNL       + V++ L  +     F+  D+ 
Sbjct: 3   VLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGK--HPTFVEGDIR 60
Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
           +   + +   ++A D V+HFA +  VGES   PL+YY N  + TL ++ +M    V   I
Sbjct: 61  NEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFI 120
Query: 193 YSSTCATYGEPEKMPITEETPQA-PINPYGKAKKMAEDIILDFSK 236
           +SS    YG+  K+P  E  P   P +P+GK+K M E I+ D  K
Sbjct: 121 FSSAATVYGDNPKIPYVESFPTGTPQSPFGKSKLMVEQILTDLQK 165

>pdb|2C20|A Chain A, Crystal Structure Of Udp-Glucose 4-Epimerase Length = 330

Iteration: 1
 Score =  114 bits (285), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 67/168 (39%), Positives = 93/168 (55%), Gaps = 9/168 (5%)
Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           +L+ GGAGYIGSHA  +L+ +   V +VDNL  G+  A+             +F   DL 
Sbjct: 4   ILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHEDAIT---------EGAKFYNGDLR 54
Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
           D   +   F++   +AVMHFAA + VG S   PL+YY+N     L +LE M    VD  I
Sbjct: 55  DKAFLRDVFTQENIEAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFI 114
Query: 193 YSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDM 240
           +SST ATYGE +   ITEET   P N YG+ K   E ++  +S+ S++
Sbjct: 115 FSSTAATYGEVDVDLITEETMTNPTNTYGETKLAIEKMLHWYSQASNL 162

>pdb|1GY8|A Chain A, Trypanosoma Brucei Udp-Galactose 4' Epimerase Length = 397

Iteration: 1
 Score = 98.2 bits (243), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 69/188 (36%), Positives = 102/188 (54%), Gaps = 25/188 (13%)
Query: 73  VLVTGGAGYIGSHAALRLLKDS-YRVTIVDNL-----------SRGNIGAVKVLQELFPE 120
           VLV GGAGYIGSH    LL+D+ + V IVD+L           +R N+ A K+ Q   P+
Sbjct: 5   VLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENV-ARKLQQSDGPK 63
Query: 121 PGRL-QFIYADLGDAKA---VNKFFSENA-FDAVMHFAAVAYVGESTLDPLKYYHNITSN 175
           P    ++   ++GD +    +N  F+ +   DAV+H  A   VGES  DPLKYY N    
Sbjct: 64  PPWADRYAALEVGDVRNEDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVG 123
Query: 176 TLVVLESMARHGVDTLIYSSTCATYGEP-------EKMPITEETPQAPINPYGKAKKMAE 228
            L +L++M  H  D +I+SS+ A +G P          PI     ++P +PYG++K +AE
Sbjct: 124 ILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAE 183
Query: 229 DIILDFSK 236
            +I D ++
Sbjct: 184 RMIRDCAE 191

>pdb|3ICP|A Chain A, Crystal Structure Of Udp-Galactose 4-Epimerase Length = 312

Iteration: 1
 Score = 85.9 bits (211), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 58/168 (34%), Positives = 85/168 (50%), Gaps = 19/168 (11%)
Query: 72  HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
            ++VTGGAG+IGSH   +L++  Y V +VDNLS G    V    EL            DL
Sbjct: 2   RIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFVNPSAELH---------VRDL 52
Query: 132 GDAKAVNKFFSENAF---DAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV 188
            D       +S  A    D V HFAA   V  ST +P+ +++     T  VLE   + GV
Sbjct: 53  KD-------YSWGAGIKGDVVFHFAANPEVRLSTTEPIVHFNENVVATFNVLEWARQTGV 105
Query: 189 DTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSK 236
            T++++S+   YG+ + +P  EE P  PI+ YG AK   E +   +++
Sbjct: 106 RTVVFASSSTVYGDADVIPTPEEEPYKPISVYGAAKAAGEVMCATYAR 153

>pdb|3EHE|A Chain A, Crystal Structure Of Udp-Glucose 4 Epimerase (Gale-1) From Archaeoglobus Fulgidus Length = 313

Iteration: 1
 Score = 85.9 bits (211), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 59/176 (33%), Positives = 89/176 (50%), Gaps = 14/176 (7%)
Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           ++VTGGAG+IGSH   +L  +S  + ++DNLS GN       +E   E  RL  + ADL 
Sbjct: 4   IVVTGGAGFIGSHVVDKL-SESNEIVVIDNLSSGN-------EEFVNEAARL--VKADLA 53
Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
            A  +  +      + V H AA   V     +P + Y N    T  +LE+M + GV  ++
Sbjct: 54  -ADDIKDYLK--GAEEVWHIAANPDVRIGAENPDEIYRNNVLATYRLLEAMRKAGVSRIV 110
Query: 193 YSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVLQCHRF 248
           ++ST   YGE + +P  E+ P  PI+ YG +K   E +I  +    DM     +RF
Sbjct: 111 FTSTSTVYGEAKVIPTPEDYPTHPISLYGASKLACEALIESYCHTFDMQAW-IYRF 165

>pdb|3AW9|A Chain A, Structure Of Udp-Galactose 4-Epimerase Mutant Length = 308

Iteration: 1
 Score = 79.3 bits (194), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 53/168 (31%), Positives = 83/168 (49%), Gaps = 23/168 (13%)
Query: 72  HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
            ++VTGGAG+IGSH   +L++  Y V +VD + R   G+              +    DL
Sbjct: 2   RIVVTGGAGFIGSHLVDKLVELGYEVVVVDIVQRDTGGSA-------------ELHVRDL 48
Query: 132 GDAKAVNKFFSENAF---DAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV 188
            D       +S  A    D V HFAA   V  ST +P+ +++     T  VLE   + GV
Sbjct: 49  KD-------YSWGAGIKGDVVFHFAANPEVRLSTTEPIVHFNENVVATFNVLEWARQTGV 101
Query: 189 DTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSK 236
            T++++S+   YG+ + +P  EE P  PI+ YG AK   E +   +++
Sbjct: 102 RTVVFASSSTVYGDADVIPTPEEEPYKPISVYGAAKAAGEVMCATYAR 149

>pdb|2P5U|A Chain A, Crystal Structure Of Thermus Thermophilus Hb8 Udp-Glucose 4- Epimerase Complex With Nad Length = 311

Iteration: 1
 Score = 74.3 bits (181), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 58/159 (36%), Positives = 77/159 (48%), Gaps = 11/159 (6%)
Query: 72  HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
            VLVTGGAG+IGSH    LL     V ++DNL+ G    V         P  + F   DL
Sbjct: 2   RVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRENV---------PKGVPFFRVDL 52
Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTL 191
            D + V + F E     V H AA A V  S  DP+  +       L +LE+  ++GV+ L
Sbjct: 53  RDKEGVERAFREFRPTHVSHQAAQASVKVSVEDPVLDFEVNLLGGLNLLEACRQYGVEKL 112
Query: 192 IYSST-CATYGE-PEKMPITEETPQAPINPYGKAKKMAE 228
           +++ST  A YGE PE     E  P  P +PY  +K   E
Sbjct: 113 VFASTGGAIYGEVPEGERAEETWPPRPKSPYAASKAAFE 151

>pdb|4EGB|A Chain A, 3.0 Angstrom Resolution Crystal Structure Of Dtdp-Glucose 4,6- Dehydratase (Rfbb) From Bacillus Anthracis Str. Ames In Complex With Nad Length = 346

Iteration: 1
 Score = 73.9 bits (180), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 53/176 (30%), Positives = 92/176 (52%), Gaps = 8/176 (4%)
Query: 72  HVLVTGGAGYIGSHAALRLLK--DSYRVTIVDNLS-RGNIGAVKVLQELFPEPGRLQFIY 128
           ++LVTGGAG+IGS+     L+  ++Y++   D L+  GN+  VK +Q+    P    F+ 
Sbjct: 26  NILVTGGAGFIGSNFVHYXLQSYETYKIINFDALTYSGNLNNVKSIQD---HPNYY-FVK 81
Query: 129 ADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV 188
            ++ + + +     E     +++FAA ++V  S  +P+ +Y      T+ +LE + ++  
Sbjct: 82  GEIQNGELLEHVIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPH 141
Query: 189 DTLIYSSTCATYGEPEKM-PITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVL 243
             L+  ST   YG   K    TEETP AP +PY  +K  A+ I L + K   + V+
Sbjct: 142 IKLVQVSTDEVYGSLGKTGRFTEETPLAPNSPYSSSKASADXIALAYYKTYQLPVI 197

>pdb|1R6D|A Chain A, Crystal Structure Of Desiv Double Mutant (Dtdp-Glucose 4,6- Dehydratase) From Streptomyces Venezuelae With Nad And Dau Bound Length = 337

Iteration: 1
 Score = 71.6 bits (174), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 52/185 (28%), Positives = 90/185 (48%), Gaps = 21/185 (11%)
Query: 73  VLVTGGAGYIGSHAALRLLKDSY------RVTIVDNLS----RGNIGAVKVLQELFPEPG 122
           +LVTGGAG+IGSH   +LL  +Y       V ++D+L+    R N+  V        +P 
Sbjct: 3   LLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDA------DP- 55
Query: 123 RLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLES 182
           RL+F++ D+ DA  + +       DA++HFAA ++V  S      +       T  +L+ 
Sbjct: 56  RLRFVHGDIRDAGLLAREL--RGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQC 113
Query: 183 MARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNS--DM 240
               GV  +++ ST   YG  +    TE +P  P +PY  +K  ++ +   + +    D+
Sbjct: 114 AVDAGVGRVVHVSTNQVYGSIDSGSWTESSPLEPNSPYAASKAGSDLVARAYHRTYGLDV 173
Query: 241 AVLQC 245
            + +C
Sbjct: 174 RITRC 178

>pdb|1R66|A Chain A, Crystal Structure Of Desiv (Dtdp-Glucose 4,6-Dehydratase) From Streptomyces Venezuelae With Nad And Tyd Bound Length = 337

Iteration: 1
 Score = 71.2 bits (173), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 52/185 (28%), Positives = 90/185 (48%), Gaps = 21/185 (11%)
Query: 73  VLVTGGAGYIGSHAALRLLKDSY------RVTIVDNLS----RGNIGAVKVLQELFPEPG 122
           +LVTGGAG+IGSH   +LL  +Y       V ++D+L+    R N+  V        +P 
Sbjct: 3   LLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDA------DP- 55
Query: 123 RLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLES 182
           RL+F++ D+ DA  + +       DA++HFAA ++V  S      +       T  +L+ 
Sbjct: 56  RLRFVHGDIRDAGLLAREL--RGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQC 113
Query: 183 MARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNS--DM 240
               GV  +++ ST   YG  +    TE +P  P +PY  +K  ++ +   + +    D+
Sbjct: 114 AVDAGVGRVVHVSTDEVYGSIDSGSWTESSPLEPNSPYAASKAGSDLVARAYHRTYGLDV 173
Query: 241 AVLQC 245
            + +C
Sbjct: 174 RITRC 178

>pdb|3VPS|A Chain A, Structure Of A Novel Nad Dependent-Ndp-Hexosamine 5,6-Dehydratase, Tuna, Involved In Tunicamycin Biosynthesis Length = 321

Iteration: 1
 Score = 67.8 bits (164), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 74/157 (47%), Gaps = 22/157 (14%)
Query: 72  HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
            +L+TGGAG+IG H A  L+     VT++D+L          +  + P  G  +F+    
Sbjct: 9   RILITGGAGFIGGHLARALVASGEEVTVLDDLR---------VPPMIPPEGTGKFL---- 55
Query: 132 GDAKAVNKFFSENAFDA--VMHFAAVAYVGESTLDPLKYYHNITSNT--LVVLESMARHG 187
              K V +    +  D   V H A+   V  S   PL Y  N+ S    L +  S+   G
Sbjct: 56  --EKPVLELEERDLSDVRLVYHLASHKSVPRSFKQPLDYLDNVDSGRHLLALCTSV---G 110
Query: 188 VDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAK 224
           V  ++  STC  YG+ + +P  E++P +P +PY  +K
Sbjct: 111 VPKVVVGSTCEVYGQADTLPTPEDSPLSPRSPYAASK 147

>pdb|2HUN|A Chain A, Crystal Structure Of Hypothetical Protein Ph0414 From Pyrococcus Horikoshii Ot3 Length = 336

Iteration: 1
 Score = 65.9 bits (159), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 51/178 (28%), Positives = 90/178 (50%), Gaps = 10/178 (5%)
Query: 73  VLVTGGAGYIGSHAALRLLKD--SYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYAD 130
           +LVTGG G+IGS+    +L+    + V  +D L  G+  A   L++L  +P R  F+  D
Sbjct: 6   LLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPAN--LKDLEDDP-RYTFVKGD 62
Query: 131 LGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDT 190
           + D + V +   +   D V+H AA ++V  S   P  + H+    T  +LES+ R   + 
Sbjct: 63  VADYELVKELVRK--VDGVVHLAAESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEV 120
Query: 191 -LIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSK--NSDMAVLQC 245
             ++ ST   YG+  K   TE     P +PY   K  ++ ++L +++  N + ++ +C
Sbjct: 121 RFVHVSTDEVYGDILKGSFTENDRLMPSSPYSATKAASDMLVLGWTRTYNLNASITRC 178

>pdb|2PZK|A Chain A, Crystal Structure Of The Bordetella Bronchiseptica Enzyme Wbmg In Complex With Nad Length = 330

Iteration: 1
 Score = 65.1 bits (157), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 45/164 (27%), Positives = 76/164 (46%), Gaps = 16/164 (9%)
Query: 72  HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
            +L+TGGAG +GS+     L   + + ++DN + G        +E+ P    L  I   +
Sbjct: 22  RILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGK-------REVLPPVAGLSVIEGSV 74
Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSN---TLVVLESMARHGV 188
            DA  + + F       V+H AA AY      DP  +  +  +N   ++ V ++ ++ GV
Sbjct: 75  TDAGLLERAFDSFKPTHVVHSAA-AY-----KDPDDWAEDAATNVQGSINVAKAASKAGV 128
Query: 189 DTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIIL 232
             L+   T   YG P  +PI  ++P AP   YG +K   E  ++
Sbjct: 129 KRLLNFQTALCYGRPATVPIPIDSPTAPFTSYGISKTAGEAFLM 172

>pdb|1ORR|A Chain A, Crystal Structure Of Cdp-tyvelose 2-epimerase Complexed With Nad And Cdp Length = 347

Iteration: 1
 Score = 64.7 bits (156), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 85/181 (46%), Gaps = 20/181 (11%)
Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           +L+TGG G++GS+ A   L     + + DNLSR   GA   L  L    G  +F++ D+ 
Sbjct: 4   LLITGGCGFLGSNLASFALSQGIDLIVFDNLSRK--GATDNLHWL-SSLGNFEFVHGDIR 60
Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD-TL 191
           +   V +  ++   D+  H A    +  S  +P   +      TL +LE++ ++  +  +
Sbjct: 61  NKNDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNI 120
Query: 192 IYSSTCATYGEPEKMPITE---------------ETPQAPI-NPYGKAKKMAEDIILDFS 235
           IYSST   YG+ E+    E               E+ Q    +PYG +K  A+  +LD++
Sbjct: 121 IYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYA 180
Query: 236 K 236
           +
Sbjct: 181 R 181

>pdb|2B69|A Chain A, Crystal Structure Of Human Udp-Glucoronic Acid Decarboxylase Length = 343

Iteration: 1
 Score = 62.8 bits (151), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 53/183 (28%), Positives = 80/183 (43%), Gaps = 21/183 (11%)
Query: 67  EEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVK--VLQELFPEPGRL 124
           E+    +L+TGGAG++GSH   +L  D + VT+VDN   G    V+  +  E F      
Sbjct: 24  EKDRKRILITGGAGFVGSHLTDKLXXDGHEVTVVDNFFTGRKRNVEHWIGHENF------ 77
Query: 125 QFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMA 184
                +L +   V   + E   D + H A+ A       +P+K     T  TL  L    
Sbjct: 78  -----ELINHDVVEPLYIE--VDQIYHLASPASPPNYXYNPIKTLKTNTIGTLNXLGLAK 130
Query: 185 RHGVDTLIYSSTCATYGEPEKMPITEE-----TPQAPINPYGKAKKMAEDIILDFSKNSD 239
           R G   L+ +ST   YG+PE  P +E+      P  P   Y + K++AE     + K   
Sbjct: 131 RVGA-RLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETXCYAYXKQEG 189
Query: 240 MAV 242
           + V
Sbjct: 190 VEV 192

>pdb|1G1A|A Chain A, The Crystal Structure Of Dtdp-D-Glucose 4,6-Dehydratase (Rmlb)from Salmonella Enterica Serovar Typhimurium Length = 361

Iteration: 1
 Score = 62.0 bits (149), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 50/184 (27%), Positives = 90/184 (48%), Gaps = 23/184 (12%)
Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTI-VDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
           +L+TGGAG+IGS     ++K++    + +D L+    G ++ L ++  E  R  F +AD+
Sbjct: 3   ILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYA--GNLESLSDI-SESNRYNFEHADI 59
Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARH----G 187
            D+  + + F +   DAVMH AA ++V  S   P  +       T  +LE   ++    G
Sbjct: 60  CDSAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALG 119
Query: 188 VDT-----LIYSSTCATYGE---PEK------MPI-TEETPQAPINPYGKAKKMAEDIIL 232
            D        + ST   YG+   P++      +P+ TE T  AP +PY  +K  ++ ++ 
Sbjct: 120 EDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVR 179
Query: 233 DFSK 236
            + +
Sbjct: 180 AWRR 183

>pdb|3RUC|A Chain A, Specific Recognition Of N-Acetylated Substrates And Domain Flexibility In Wbgu: A Udp-Galnac 4-Epimerase Length = 351

Iteration: 1
 Score = 62.0 bits (149), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 49/158 (31%), Positives = 76/158 (48%), Gaps = 6/158 (3%)
Query: 74  LVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRG---NIGAVKVLQELFPEPGRLQFIYAD 130
           L+TG AG+IGS+   +LLK +  V  +DN S G   N+  VK L     +  R  FI  D
Sbjct: 29  LITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVST-EQWSRFCFIEGD 87
Query: 131 LGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDT 190
           + D     +       D V+H AA+  V  S +DP+       +  L +L +     V +
Sbjct: 88  IRDLTTCEQVMK--GVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQS 145
Query: 191 LIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAE 228
             Y+++ +TYG+   +P  EE    P++PY   K + E
Sbjct: 146 FTYAASSSTYGDHPALPKVEENIGNPLSPYAVTKYVNE 183

>pdb|3LU1|A Chain A, Crystal Structure Analysis Of Wbgu: A Udp-Galnac 4-Epimerase Length = 364

Iteration: 1
 Score = 61.6 bits (148), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 49/158 (31%), Positives = 76/158 (48%), Gaps = 6/158 (3%)
Query: 74  LVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRG---NIGAVKVLQELFPEPGRLQFIYAD 130
           L+TG AG+IGS+   +LLK +  V  +DN S G   N+  VK L     +  R  FI  D
Sbjct: 42  LITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVST-EQWSRFCFIEGD 100
Query: 131 LGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDT 190
           + D     +       D V+H AA+  V  S +DP+       +  L +L +     V +
Sbjct: 101 IRDLTTCEQVMK--GVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQS 158
Query: 191 LIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAE 228
             Y+++ +TYG+   +P  EE    P++PY   K + E
Sbjct: 159 FTYAASSSTYGDHPALPKVEENIGNPLSPYAVTKYVNE 196

>pdb|2Q1W|A Chain A, Crystal Structure Of The Bordetella Bronchiseptica Enzyme Wbmh In Complex With Nad+ Length = 333

Iteration: 1
 Score = 61.6 bits (148), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 47/167 (28%), Positives = 78/167 (46%), Gaps = 17/167 (10%)
Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           V +TG  G IGSH A  LL+   +V  +DN + G        +E   +   L F+   + 
Sbjct: 24  VFITGICGQIGSHIAELLLERGDKVVGIDNFATGR-------REHLKDHPNLTFVEGSIA 76
Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTL---VVLESMARHGVD 189
           D   VN+   +   DAV+H AA      S  DP  +Y++  +N +    V+++  ++ V 
Sbjct: 77  DHALVNQLIGDLQPDAVVHTAA------SYKDPDDWYNDTLTNCVGGSNVVQAAKKNNVG 130
Query: 190 TLIYSSTCATYG-EPEKMPITEETPQAPINPYGKAKKMAEDIILDFS 235
             +Y  T   YG +P + P+  + P+ P N      K A +  L++S
Sbjct: 131 RFVYFQTALCYGVKPIQQPVRLDHPRNPANSSYAISKSANEDYLEYS 177

>pdb|3RU9|A Chain A, Specific Recognition Of N-Acetylated Substrates And Domain Flexibility In Wbgu: A Udp-Galnac 4-Epimerase Length = 351

Iteration: 1
 Score = 61.6 bits (148), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 49/158 (31%), Positives = 76/158 (48%), Gaps = 6/158 (3%)
Query: 74  LVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRG---NIGAVKVLQELFPEPGRLQFIYAD 130
           L+TG AG+IGS+   +LLK +  V  +DN S G   N+  VK L     +  R  FI  D
Sbjct: 29  LITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVST-EQWSRFCFIEGD 87
Query: 131 LGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDT 190
           + D     +       D V+H AA+  V  S +DP+       +  L +L +     V +
Sbjct: 88  IRDLTTCEQVMK--GVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQS 145
Query: 191 LIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAE 228
             Y+++ +TYG+   +P  EE    P++PY   K + E
Sbjct: 146 FTYAASSSTYGDHPALPKVEENIGNPLSPYAVTKYVNE 183

>pdb|3RU7|A Chain A, Specific Recognition Of N-Acetylated Substrates And Domain Flexibility In Wbgu: A Udp-Galnac 4-Epimerase Length = 351

Iteration: 1
 Score = 61.6 bits (148), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 49/158 (31%), Positives = 76/158 (48%), Gaps = 6/158 (3%)
Query: 74  LVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRG---NIGAVKVLQELFPEPGRLQFIYAD 130
           L+TG AG+IGS+   +LLK +  V  +DN S G   N+  VK L     +  R  FI  D
Sbjct: 23  LITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVST-EQWSRFCFIEGD 81
Query: 131 LGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDT 190
           + D     +       D V+H AA+  V  S +DP+       +  L +L +     V +
Sbjct: 82  IRDLTTCEQVMK--GVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQS 139
Query: 191 LIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAE 228
             Y+++ +TYG+   +P  EE    P++PY   K + E
Sbjct: 140 FTYAASSSTYGDHPALPKVEENIGNPLSPYAVTKYVNE 177

>pdb|1SB8|A Chain A, Crystal Structure Of Pseudomonas Aeruginosa Udp-N-Acetylglucosamine 4- Epimerase Complexed With Udp-N-Acetylgalactosamine Length = 352

Iteration: 1
 Score = 60.8 bits (146), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 45/157 (28%), Positives = 75/157 (47%), Gaps = 4/157 (2%)
Query: 74  LVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEP--GRLQFIYADL 131
           L+TG AG+IGS+    LLK   +V  +DN + G+   +  ++ L  E      +FI  D+
Sbjct: 31  LITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDI 90
Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTL 191
            +    N   +    D V+H AA+  V  S  DP+          L +L +     V + 
Sbjct: 91  RNLDDCNNACA--GVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSF 148
Query: 192 IYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAE 228
            Y+++ +TYG+   +P  E+T   P++PY   K + E
Sbjct: 149 TYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNE 185

>pdb|1BXK|A Chain A, Dtdp-Glucose 4,6-Dehydratase From E. Coli Length = 355

Iteration: 1
 Score = 58.2 bits (139), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 54/187 (28%), Positives = 85/187 (45%), Gaps = 23/187 (12%)
Query: 73  VLVTGGAGYIGSHAALRLLKD-SYRVTIVDNLS-RGNIGAVKVLQELFP--EPGRLQFIY 128
           +L+TGGAG+IGS     ++ + S  V +VD L+  GN      L  L P  +  R  F  
Sbjct: 4   ILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGN------LMSLAPVAQSERFAFEK 57
Query: 129 ADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV 188
            D+ D   + + F+E+  D VMH AA ++V  S   P  +       T  +LE+ AR   
Sbjct: 58  VDICDRAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEA-ARAYW 116
Query: 189 DTLI----------YSSTCATYGEPEKMP--ITEETPQAPINPYGKAKKMAEDIILDFSK 236
           + L           + ST   YG+        TE TP AP +PY  +K  ++ ++  + +
Sbjct: 117 NALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLVRAWLR 176
Query: 237 NSDMAVL 243
              +  L
Sbjct: 177 TYGLPTL 183

>pdb|2PK3|A Chain A, Crystal Structure Of A Gdp-4-Keto-6-Deoxy-D-Mannose Reductase Length = 321

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 48/183 (26%), Positives = 82/183 (44%), Gaps = 16/183 (8%)
Query: 69  GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIY 128
           G    L+TG AG++G + A  L + +  V      SR N       +   P    ++ I 
Sbjct: 11  GSMRALITGVAGFVGKYLANHLTEQNVEVF---GTSRNN-------EAKLPN---VEMIS 57
Query: 129 ADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV 188
            D+ D++ V K  S+   D + H AA + V +S L+    +      TL VL+++    +
Sbjct: 58  LDIMDSQRVKKVISDIKPDYIFHLAAKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNL 117
Query: 189 DTLIYS-STCATYGE--PEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVLQC 245
           D  I +  +   YG   PE+ P++EE    P++PYG +K     +   + K   M ++  
Sbjct: 118 DCRILTIGSSEEYGMILPEESPVSEENQLRPMSPYGVSKASVGMLARQYVKAYGMDIIHT 177
Query: 246 HRF 248
             F
Sbjct: 178 RTF 180

>pdb|1T2A|A Chain A, Crystal Structure Of Human Gdp-D-Mannose 4,6-Dehydratase Length = 375

Iteration: 1
 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 50/173 (28%), Positives = 86/173 (49%), Gaps = 14/173 (8%)
Query: 74  LVTGGAGYIGSHAALRLLKDSYRV-TIVDNLSRGNIGAVKVLQELFPEP-----GRLQFI 127
           L+TG  G  GS+ A  LL+  Y V  IV   S  N G +   + L+  P     G ++  
Sbjct: 28  LITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRI---EHLYKNPQAHIEGNMKLH 84
Query: 128 YADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITS-NTLVVLESMARH 186
           Y DL D+  + K  +E     + +  A ++V + + D  +Y  ++    TL +L+++   
Sbjct: 85  YGDLTDSTCLVKIINEVKPTEIYNLGAQSHV-KISFDLAEYTADVDGVGTLRLLDAVKTC 143
Query: 187 GVDTLI---YSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSK 236
           G+   +    +ST   YG+ +++P  E TP  P +PYG AK  A  I+++F +
Sbjct: 144 GLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFRE 196

>pdb|1KEP|A Chain A, The Crystal Structure Of Dtdp-D-Glucose 4,6-Dehydratase (Rmlb) From Streptococcus Suis With Dtdp-Xylose Bound Length = 348

Iteration: 1
 Score = 55.1 bits (131), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 49/175 (28%), Positives = 88/175 (50%), Gaps = 22/175 (12%)
Query: 72  HVLVTGGAGYIGSHAALRLLKD--SYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYA 129
           +++VTGGAG+IGS+    +  +     VT++D L+    G    L+ +  +  R++ +  
Sbjct: 6   NIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYA--GNKANLEAILGD--RVELVVG 61
Query: 130 DLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD 189
           D+ DA+ V+K  ++   DA++H+AA ++   S  DP  + H     T  +LE+  ++ + 
Sbjct: 62  DIADAELVDKLAAK--ADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDI- 118
Query: 190 TLIYSSTCATYGE---PEKMP---------ITEETPQAPINPYGKAKKMAEDIIL 232
              + ST   YG+    E +P          T ET   P +PY  + K A D+I+
Sbjct: 119 RFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPY-SSTKAASDLIV 172

>pdb|2Z1M|A Chain A, Crystal Structure Of Gdp-D-Mannose Dehydratase From Aquifex Aeolicus Vf5 Length = 345

Iteration: 1
 Score = 55.1 bits (131), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 49/170 (28%), Positives = 83/170 (48%), Gaps = 4/170 (2%)
Query: 72  HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
             L+TG  G  G++ A  LL+  Y V   D  S G   + + L+EL  E   ++ I+ DL
Sbjct: 5   RALITGIRGQDGAYLAKLLLEKGYEVYGADRRS-GEFASWR-LKELGIE-NDVKIIHMDL 61
Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTL 191
            +   + +   +   D V + AA ++VG S   P+          L +LE++     DT 
Sbjct: 62  LEFSNIIRTIEKVQPDEVYNLAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTVKPDTK 121
Query: 192 IY-SSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDM 240
            Y +ST   +G+ +++P TE+TP  P +PY  AK     I +++ +  +M
Sbjct: 122 FYQASTSEMFGKVQEIPQTEKTPFYPRSPYAVAKLFGHWITVNYREAYNM 171

>pdb|1DB3|A Chain A, E.Coli Gdp-Mannose 4,6-Dehydratase Length = 372

Iteration: 1
 Score = 50.4 bits (119), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 48/175 (27%), Positives = 84/175 (48%), Gaps = 11/175 (6%)
Query: 74  LVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPG----RLQFIYA 129
           L+TG  G  GS+ A  LL+  Y V  +    R +    + +  ++ +P     +    Y 
Sbjct: 5   LITGVTGQDGSYLAEFLLEKGYEVHGIKR--RASSFNTERVDHIYQDPHTCNPKFHLHYG 62
Query: 130 DLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITS-NTLVVLESMARHGV 188
           DL D   + +   E   D V +  A+++V  S   P +Y  ++ +  TL +LE++   G+
Sbjct: 63  DLSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESP-EYTADVDAMGTLRLLEAIRFLGL 121
Query: 189 D--TLIY-SSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDM 240
           +  T  Y +ST   YG  +++P  E TP  P +PY  AK  A  I +++ ++  M
Sbjct: 122 EKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGM 176

>pdb|4ID9|A Chain A, Crystal Structure Of A Short-Chain DehydrogenaseREDUCTASE SUPERFAMILY Protein From Agrobacterium Tumefaciens (Target Efi-506441) With Bound Nad, Monoclinic Form 1 Length = 347

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 43/169 (25%), Positives = 76/169 (44%), Gaps = 29/169 (17%)
Query: 69  GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIY 128
           G   +LVTG AG +G  A +  L+   R     +L     G  +V+              
Sbjct: 18  GSHMILVTGSAGRVG-RAVVAALRTQGRTVRGFDLRPSGTGGEEVV-------------- 62
Query: 129 ADLGDAKAVNKFFSENAFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVLESMA 184
             L D +A++        DA+M  +AV ++G     +  D  + +      T  +L++ +
Sbjct: 63  GSLEDGQALS--------DAIMGVSAVLHLGAFMSWAPADRDRMFAVNVEGTRRLLDAAS 114
Query: 185 RHGVDTLIYSSTCATYGE--PEKMPITEETPQAPINPYGKAKKMAEDII 231
             GV   +++S+   Y E  PE +P+TE+ P  P +PYG  K + E+++
Sbjct: 115 AAGVRRFVFASSGEVYPENRPEFLPVTEDHPLCPNSPYGLTKLLGEELV 163

>pdb|2HRZ|A Chain A, The Crystal Structure Of The Nucleoside-diphosphate-sugar Epimerase From Agrobacterium Tumefaciens Length = 342

Iteration: 1
 Score = 47.8 bits (112), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 47/180 (26%), Positives = 76/180 (42%), Gaps = 27/180 (15%)
Query: 72  HVLVTGGAGYIGSHAALRLLKDSY-------RVTIVDNLSRGNIGAVKVLQELFPE--PG 122
           H+ + G AG +G     RL+KD         + T++D           V Q   P    G
Sbjct: 16  HIAIIGAAGXVGRKLTQRLVKDGSLGGKPVEKFTLID-----------VFQPEAPAGFSG 64
Query: 123 RLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLES 182
            +    ADL       K   E   D + H AA+   GE+ LD  K Y      T  + ++
Sbjct: 65  AVDARAADLSAPGEAEKLV-EARPDVIFHLAAIVS-GEAELDFDKGYRINLDGTRYLFDA 122
Query: 183 MA-RHGVD----TLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKN 237
           +   +G D     ++++S+ A +G P   PI +E    P+  YG  K + E ++ D+S+ 
Sbjct: 123 IRIANGKDGYKPRVVFTSSIAVFGAPLPYPIPDEFHTTPLTSYGTQKAICELLLSDYSRR 182

>pdb|1RPN|A Chain A, Crystal Structure Of Gdp-D-Mannose 4,6-Dehydratase In Complexes With Gdp And Nadph Length = 335

Iteration: 1
 Score = 47.4 bits (111), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 47/165 (28%), Positives = 79/165 (47%), Gaps = 4/165 (2%)
Query: 74  LVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD 133
           LVTG  G  G++ A  LL+  YRV  +  ++R +      L+EL  E G +Q+   D+ D
Sbjct: 18  LVTGITGQDGAYLAKLLLEKGYRVHGL--VARRSSDTRWRLRELGIE-GDIQYEDGDMAD 74
Query: 134 AKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIY 193
           A +V +   +     V + AA ++VG S   P+            +LE++ +   +T  Y
Sbjct: 75  ACSVQRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFY 134
Query: 194 -SSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKN 237
            +ST   +G  +     E TP  P +PYG AK     I +++ ++
Sbjct: 135 QASTSEMFGLIQAERQDENTPFYPRSPYGVAKLYGHWITVNYRES 179

>pdb|3A1N|A Chain A, Crystal Structure Of L-Threonine Dehydrogenase From Hyperthermophilic Archaeon Thermoplasma Volcanium Length = 317

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/158 (25%), Positives = 71/158 (44%), Gaps = 16/158 (10%)
Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           +LVTG +G IG+     L          +   + N+ A  ++Q    + G ++FI  D+ 
Sbjct: 2   ILVTGSSGQIGTELVPYL---------AEKYGKKNVIASDIVQR---DTGGIKFITLDVS 49
Query: 133 DAKAVNKFFSENAFDAVMHFAAV-AYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTL 191
           +   +++   + + DA+ H A + +  GE   DP   Y    + T  +LE+  +H V+ +
Sbjct: 50  NRDEIDRAVEKYSIDAIFHLAGILSAKGEK--DPALAYKVNMNGTYNILEAAKQHRVEKV 107
Query: 192 IYSSTCATYG-EPEKMPITEETPQAPINPYGKAKKMAE 228
           +  ST   +G E  K  +   T   P   YG  K  AE
Sbjct: 108 VIPSTIGVFGPETPKNKVPSITITRPRTMYGVTKIAAE 145

>pdb|3A9W|A Chain A, Crystal Structure Of L-Threonine Bound L-Threonine Dehydrogenase (Y137f) From Hyperthermophilic Archaeon Thermoplasma Volcanium Length = 317

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 40/158 (25%), Positives = 71/158 (44%), Gaps = 16/158 (10%)
Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           +LVTG +G IG+     L          +   + N+ A  ++Q    + G ++FI  D+ 
Sbjct: 2   ILVTGSSGQIGTELVPYL---------AEKYGKKNVIASDIVQR---DTGGIKFITLDVS 49
Query: 133 DAKAVNKFFSENAFDAVMHFAAV-AYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTL 191
           +   +++   + + DA+ H A + +  GE   DP   Y    + T  +LE+  +H V+ +
Sbjct: 50  NRDEIDRAVEKYSIDAIFHLAGILSAKGEK--DPALAYKVNMNGTYNILEAAKQHRVEKV 107
Query: 192 IYSSTCATYG-EPEKMPITEETPQAPINPYGKAKKMAE 228
           +  ST   +G E  K  +   T   P   +G  K  AE
Sbjct: 108 VIPSTIGVFGPETPKNKVPSITITRPRTMFGVTKIAAE 145

>pdb|1I24|A Chain A, High Resolution Crystal Structure Of The Wild-Type Protein Sqd1, With Nad And Udp-Glucose Length = 404

Iteration: 1
 Score = 44.3 bits (103), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 43/151 (28%), Positives = 61/151 (40%), Gaps = 18/151 (11%)
Query: 71  THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFP----------- 119
           + V+V GG GY G   AL L K +Y V IVDNL R        L+ L P           
Sbjct: 12  SRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRW 71
Query: 120 ---EPGRLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLK---YYHNIT 173
                  ++    D+ D + + + F     D+V+HF        S +D  +     HN  
Sbjct: 72  KALTGKSIELYVGDICDFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNV 131
Query: 174 SNTLVVLESMARHGVDT-LIYSSTCATYGEP 203
             TL VL ++   G +  L+   T   YG P
Sbjct: 132 IGTLNVLFAIKEFGEECHLVKLGTMGEYGTP 162

>pdb|1QRR|A Chain A, Crystal Structure Of Sqd1 Protein Complex With Nad And Udp- Glucose Length = 394

Iteration: 1
 Score = 43.9 bits (102), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 43/149 (28%), Positives = 60/149 (40%), Gaps = 18/149 (12%)
Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFP------------- 119
           V+V GG GY G   AL L K +Y V IVDNL R        L+ L P             
Sbjct: 4   VMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKA 63
Query: 120 -EPGRLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLK---YYHNITSN 175
                ++    D+ D + + + F     D+V+HF        S +D  +     HN    
Sbjct: 64  LTGKSIELYVGDICDFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIG 123
Query: 176 TLVVLESMARHGVDT-LIYSSTCATYGEP 203
           TL VL ++   G +  L+   T   YG P
Sbjct: 124 TLNVLFAIKEFGEECHLVKLGTMGEYGTP 152

>pdb|2PZJ|A Chain A, Crystal Structure Of The Bordetella Bronchiseptica Enzyme Wbmf In Complex With Nad+ Length = 377

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/166 (27%), Positives = 76/166 (45%), Gaps = 17/166 (10%)
Query: 71  THVLVTGGAGYIGSHAALRLLK-DSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYA 129
           T+V+V GGAG++GS+   RLL+    +V +VDNL    + A K+     P+   ++F   
Sbjct: 33  TNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNL----LSAEKI---NVPDHPAVRFSET 85
Query: 130 DLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMAR-HGV 188
            + D   +     ++ +D V H A       S  DPL  + N T  TL + E +     +
Sbjct: 86  SITDDALLASL--QDEYDYVFHLATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRL 143
Query: 189 DTLIYSSTCATYGEP--EKMPITEETPQAPI----NPYGKAKKMAE 228
             ++YS+   +  E   +    TEET    +    +PY  +K   E
Sbjct: 144 KKVVYSAAGCSIAEKTFDDAKATEETDIVSLHNNDSPYSMSKIFGE 189

>pdb|1I2B|A Chain A, Crystal Structure Of Mutant T145a Sqd1 Protein Complex With Nad And Udp-SulfoquinovoseUDP-Glucose Length = 404

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 60/151 (39%), Gaps = 18/151 (11%)
Query: 71  THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFP----------- 119
           + V+V GG GY G   AL L K +Y V IVDNL R        L+ L P           
Sbjct: 12  SRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRW 71
Query: 120 ---EPGRLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLK---YYHNIT 173
                  ++    D+ D + + + F     D+V+HF        S +D  +     HN  
Sbjct: 72  KALTGKSIELYVGDICDFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNV 131
Query: 174 SNTLVVLESMARHGVDT-LIYSSTCATYGEP 203
             TL VL ++   G +  L+       YG P
Sbjct: 132 IGTLNVLFAIKEFGEECHLVKLGAMGEYGTP 162

>pdb|2C29|D Chain D, Structure Of Dihydroflavonol Reductase From Vitis Vinifera At 1.8 A. Length = 337

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 47/168 (27%), Positives = 75/168 (44%), Gaps = 31/168 (18%)
Query: 73  VLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYAD 130
           V VTG +G+IGS   +RLL+  Y  R T+ D     N+  VK L +L      L    AD
Sbjct: 8   VCVTGASGFIGSWLVMRLLERGYTVRATVRDPT---NVKKVKHLLDLPKAETHLTLWKAD 64
Query: 131 LGDAKAVNKFFSENAFD-AVMHFAAVAYVGESTLDPLKYYHNITSNTLV--VLESM---- 183
           L D         E +FD A+     V +V      P+ +      N ++   +E M    
Sbjct: 65  LAD---------EGSFDEAIKGCTGVFHVAT----PMDFESKDPENEVIKPTIEGMLGIM 111
Query: 184 ----ARHGVDTLIYSSTCATYGEPE-KMPITEETPQAPINPYGKAKKM 226
               A   V  L+++S+  T    E ++P+ +E+  + +  + +AKKM
Sbjct: 112 KSCAAAKTVRRLVFTSSAGTVNIQEHQLPVYDESCWSDME-FCRAKKM 158

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	248
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	8e-80
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	2e-72
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	2e-71
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	7e-70
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	3e-68
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	6e-67
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	7e-67
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	7e-66
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	1e-63
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	8e-62
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	1e-51
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	7e-50
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	7e-49
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	4e-46
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	2e-45
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	4e-45
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	3e-44
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	6e-42
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	9e-39
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	1e-38
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	4e-37
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	6e-37
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	1e-35
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	8e-35
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	2e-34
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	3e-28
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	1e-27
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	2e-26
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	2e-24
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	2e-22
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	8e-22
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	1e-21
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	2e-21
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	2e-21
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	3e-20
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	4e-20
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	5e-19
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	8e-19
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	3e-18
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	3e-17
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	6e-17
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	1e-15
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	2e-13
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	3e-13
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	2e-11
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	2e-11
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	9e-11
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	1e-10
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	6e-10
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	3e-09
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	7e-09
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	1e-08
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	1e-08
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	1e-08
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	2e-08
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	5e-08
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	2e-07
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	3e-07
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	7e-07
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	7e-07
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	1e-06
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	3e-06
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	8e-06
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	2e-05
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	3e-05
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	4e-05
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	4e-05
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	4e-05
1xq6_A	253	Unknown protein; structural genomics, protein stru	6e-05
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	8e-05
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	9e-05
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	1e-04
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	1e-04
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	1e-04
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	1e-04
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	1e-04
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	1e-04
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	1e-04
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	1e-04
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	2e-04
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	2e-04
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	2e-04
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	2e-04
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	2e-04
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	2e-04
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	3e-04
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	3e-04
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	3e-04
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	3e-04
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	3e-04
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	3e-04
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	3e-04
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	3e-04
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	4e-04
1xkq_A	280	Short-chain reductase family member (5D234); parra	4e-04
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	5e-04
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	5e-04
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	6e-04
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	7e-04
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	7e-04
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	8e-04
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	8e-04

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} Length = 330

 Score =  241 bits (619), Expect = 8e-80
 Identities = 67/170 (39%), Positives = 93/170 (54%), Gaps = 9/170 (5%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           +L+ GGAGYIGSHA  +L+ +   V +VDNL  G+  A+             +F   DL 
Sbjct: 4   ILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHEDAI---------TEGAKFYNGDLR 54

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
           D   +   F++   +AVMHFAA + VG S   PL+YY+N     L +LE M    VD  I
Sbjct: 55  DKAFLRDVFTQENIEAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFI 114

Query: 193 YSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAV 242
           +SST ATYGE +   ITEET   P N YG+ K   E ++  +S+ S++  
Sbjct: 115 FSSTAATYGEVDVDLITEETMTNPTNTYGETKLAIEKMLHWYSQASNLRY 164

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* Length = 330

 Score =  223 bits (570), Expect = 2e-72
 Identities = 43/182 (23%), Positives = 73/182 (40%), Gaps = 16/182 (8%)

Query: 59  SPSPFSQHEEGVT------HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVK 112
           S      H  G+        +L+TGGAG +GS+     L   + + ++DN + G    + 
Sbjct: 3   SSHHHHHHSSGLVPRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVL- 61

Query: 113 VLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNI 172
                 P    L  I   + DA  + + F       V+H AA     +   D  +     
Sbjct: 62  ------PPVAGLSVIEGSVTDAGLLERAFDSFKPTHVVHSAAAYKDPD---DWAEDAATN 112

Query: 173 TSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIIL 232
              ++ V ++ ++ GV  L+   T   YG P  +PI  ++P AP   YG +K   E  ++
Sbjct: 113 VQGSINVAKAASKAGVKRLLNFQTALCYGRPATVPIPIDSPTAPFTSYGISKTAGEAFLM 172

Query: 233 DF 234
             
Sbjct: 173 MS 174

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* Length = 397

 Score =  222 bits (568), Expect = 2e-71
 Identities = 62/187 (33%), Positives = 91/187 (48%), Gaps = 23/187 (12%)

Query: 73  VLVTGGAGYIGSHAALRLLKDS-YRVTIVDNLSRGNIGAVKVL--------------QEL 117
           VLV GGAGYIGSH    LL+D+ + V IVD+L   +  +  V                + 
Sbjct: 5   VLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKP 64

Query: 118 FPEPGRLQFIYADLGDAKAVNKFFSENA-FDAVMHFAAVAYVGESTLDPLKYYHNITSNT 176
                       D+ +   +N  F+ +   DAV+H  A   VGES  DPLKYY N     
Sbjct: 65  PWADRYAALEVGDVRNEDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGI 124

Query: 177 LVVLESMARHGVDTLIYSSTCATYGEP-------EKMPITEETPQAPINPYGKAKKMAED 229
           L +L++M  H  D +I+SS+ A +G P          PI     ++P +PYG++K +AE 
Sbjct: 125 LRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAER 184

Query: 230 IILDFSK 236
           +I D ++
Sbjct: 185 MIRDCAE 191

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* Length = 311

 Score =  216 bits (552), Expect = 7e-70
 Identities = 58/170 (34%), Positives = 82/170 (48%), Gaps = 11/170 (6%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           VLVTGGAG+IGSH    LL     V ++DNL+ G    V         P  + F   DL 
Sbjct: 3   VLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRENV---------PKGVPFFRVDLR 53

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
           D + V + F E     V H AA A V  S  DP+  +       L +LE+  ++GV+ L+
Sbjct: 54  DKEGVERAFREFRPTHVSHQAAQASVKVSVEDPVLDFEVNLLGGLNLLEACRQYGVEKLV 113

Query: 193 YSST-CATYGE-PEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDM 240
           ++ST  A YGE PE     E  P  P +PY  +K   E  +  + ++  +
Sbjct: 114 FASTGGAIYGEVPEGERAEETWPPRPKSPYAASKAAFEHYLSVYGQSYGL 163

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} Length = 341

 Score =  212 bits (543), Expect = 3e-68
 Identities = 65/165 (39%), Positives = 91/165 (55%), Gaps = 4/165 (2%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPG-RLQFIYADL 131
           +LVTGGAGYIGSH A+ LL   Y V I DNL      A+  ++++    G    F   D+
Sbjct: 8   ILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKI---TGKTPAFHETDV 64

Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTL 191
            D +A+ + F  +   A +HFAA+  VGES   P++YY N   + L +L  M    V  +
Sbjct: 65  SDERALARIFDAHPITAAIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAVKRI 124

Query: 192 IYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSK 236
           ++SS+   YG PE+ PI E  P +  NPYG+ K MAE I+ D   
Sbjct: 125 VFSSSATVYGVPERSPIDETFPLSATNPYGQTKLMAEQILRDVEA 169

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A* Length = 338

 Score =  209 bits (535), Expect = 6e-67
 Identities = 63/166 (37%), Positives = 94/166 (56%), Gaps = 5/166 (3%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPG-RLQFIYADL 131
           VLVTGG+GYIGSH  ++LL++ + V I+DNL       + V++ L    G    F+  D+
Sbjct: 3   VLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERL---GGKHPTFVEGDI 59

Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTL 191
            +   + +   ++A D V+HFA +  VGES   PL+YY N  + TL ++ +M    V   
Sbjct: 60  RNEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNF 119

Query: 192 IYSSTCATYGEPEKMPITEETP-QAPINPYGKAKKMAEDIILDFSK 236
           I+SS+   YG+  K+P  E  P   P +PYGK+K M E I+ D  K
Sbjct: 120 IFSSSATVYGDNPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQK 165

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} Length = 313

 Score =  208 bits (532), Expect = 7e-67
 Identities = 52/169 (30%), Positives = 80/169 (47%), Gaps = 13/169 (7%)

Query: 72  HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
            ++VTGGAG+IGSH   +L +    + ++DNLS GN   V             + + ADL
Sbjct: 3   LIVVTGGAGFIGSHVVDKLSES-NEIVVIDNLSSGNEEFV---------NEAARLVKADL 52

Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTL 191
                 +        + V H AA   V     +P + Y N    T  +LE+M + GV  +
Sbjct: 53  AADDIKDYLKG---AEEVWHIAANPDVRIGAENPDEIYRNNVLATYRLLEAMRKAGVSRI 109

Query: 192 IYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDM 240
           +++ST   YGE + +P  E+ P  PI+ YG +K   E +I  +    DM
Sbjct: 110 VFTSTSTVYGEAKVIPTPEDYPTHPISLYGASKLACEALIESYCHTFDM 158

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} PDB: 3icp_A* 3aw9_A* Length = 312

 Score =  205 bits (525), Expect = 7e-66
 Identities = 54/168 (32%), Positives = 82/168 (48%), Gaps = 13/168 (7%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           ++VTGGAG+IGSH   +L++  Y V +VDNLS G    V             +    DL 
Sbjct: 3   IVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFV---------NPSAELHVRDLK 53

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
           D             D V HFAA   V  ST +P+ +++     T  VLE   + GV T++
Sbjct: 54  DYSWGAGIK----GDVVFHFAANPEVRLSTTEPIVHFNENVVATFNVLEWARQTGVRTVV 109

Query: 193 YSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDM 240
           ++S+   YG+ + +P  EE P  PI+ YG AK   E +   +++   +
Sbjct: 110 FASSSTVYGDADVIPTPEEEPYKPISVYGAAKAAGEVMCATYARLFGV 157

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* Length = 348

 Score =  201 bits (514), Expect = 1e-63
 Identities = 67/172 (38%), Positives = 96/172 (55%), Gaps = 11/172 (6%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS------RGNIGAVKVLQELFPEPG-RLQ 125
           VLVTGGAGYIGSH  L LL+  Y   ++DN             +++ +QEL    G  ++
Sbjct: 5   VLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQEL---TGRSVE 61

Query: 126 FIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMAR 185
           F   D+ D  A+ + F + +F AV+HFA +  VGES   PL YY    + T+ +LE M  
Sbjct: 62  FEEMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKA 121

Query: 186 HGVDTLIYSSTCATYGEPEKMPITEETP-QAPINPYGKAKKMAEDIILDFSK 236
           HGV  L++SS+   YG P+ +P+ E  P     NPYGK+K   E++I D  +
Sbjct: 122 HGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQ 173

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 Length = 699

 Score =  204 bits (521), Expect = 8e-62
 Identities = 71/168 (42%), Positives = 95/168 (56%), Gaps = 6/168 (3%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           VLVTGGAGYIGSH  + L+++ Y   + DNLS     +V  L+ L      + F   DL 
Sbjct: 14  VLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKH--HIPFYEVDLC 71

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
           D K + K F E   D+V+HFA +  VGEST  PL+YYHN    T+V+LE M ++ V   +
Sbjct: 72  DRKGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFV 131

Query: 193 YSSTCATYGE----PEKMPITEETPQAPINPYGKAKKMAEDIILDFSK 236
           +SS+   YG+    P  +PI EE P  P NPYG  K   E+I+ D   
Sbjct: 132 FSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYAIENILNDLYN 179

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* Length = 404

 Score =  171 bits (436), Expect = 1e-51
 Identities = 50/203 (24%), Positives = 72/203 (35%), Gaps = 31/203 (15%)

Query: 72  HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPG--------- 122
            V+V GG GY G   AL L K +Y V IVDNL R        L+ L P            
Sbjct: 13  RVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWK 72

Query: 123 -----RLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDP---LKYYHNITS 174
                 ++    D+ D + + + F     D+V+HF        S +D    +   HN   
Sbjct: 73  ALTGKSIELYVGDICDFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVI 132

Query: 175 NTLVVLESMARHGVDT-LIYSSTCATYGEPEK------MPITEE-------TPQAPINPY 220
            TL VL ++   G +  L+   T   YG P        + IT          P+   + Y
Sbjct: 133 GTLNVLFAIKEFGEECHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFY 192

Query: 221 GKAKKMAEDIILDFSKNSDMAVL 243
             +K      I    K   +   
Sbjct: 193 HLSKVHDSHNIAFTCKAWGIRAT 215

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} Length = 342

 Score =  165 bits (420), Expect = 7e-50
 Identities = 42/177 (23%), Positives = 70/177 (39%), Gaps = 23/177 (12%)

Query: 72  HVLVTGGAGYIGSHAALRLLKDSY-------RVTIVDNLSRGNIGAVKVLQELFPEPGRL 124
           H+ + G AG +G     RL+KD         + T++D                    G +
Sbjct: 16  HIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPAGF---------SGAV 66

Query: 125 QFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMA 184
               ADL       K   E   D + H AA+   GE+ LD  K Y      T  + +++ 
Sbjct: 67  DARAADLSAPGEAEKLV-EARPDVIFHLAAIV-SGEAELDFDKGYRINLDGTRYLFDAIR 124

Query: 185 RHGVDT-----LIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSK 236
                      ++++S+ A +G P   PI +E    P+  YG  K + E ++ D+S+
Sbjct: 125 IANGKDGYKPRVVFTSSIAVFGAPLPYPIPDEFHTTPLTSYGTQKAICELLLSDYSR 181

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} Length = 333

 Score =  162 bits (413), Expect = 7e-49
 Identities = 43/161 (26%), Positives = 71/161 (44%), Gaps = 18/161 (11%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           V +TG  G IGSH A  LL+   +V  +DN + G    +        +   L F+   + 
Sbjct: 24  VFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHL-------KDHPNLTFVEGSIA 76

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSN---TLVVLESMARHGVD 189
           D   VN+   +   DAV+H AA          P  +Y++  +N      V+++  ++ V 
Sbjct: 77  DHALVNQLIGDLQPDAVVHTAASYKD------PDDWYNDTLTNCVGGSNVVQAAKKNNVG 130

Query: 190 TLIYSSTCATYG-EPEKMPITEETPQAPIN-PYGKAKKMAE 228
             +Y  T   YG +P + P+  + P+ P N  Y  +K   E
Sbjct: 131 RFVYFQTALCYGVKPIQQPVRLDHPRNPANSSYAISKSANE 171

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* Length = 352

 Score =  156 bits (396), Expect = 4e-46
 Identities = 50/172 (29%), Positives = 79/172 (45%), Gaps = 8/172 (4%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRG---NIGAVKVLQELFPEPGRLQFIYA 129
            L+TG AG+IGS+    LLK   +V  +DN + G   N+  V+ L          +FI  
Sbjct: 30  WLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWS-NFKFIQG 88

Query: 130 DLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYH-NITSNTLVVLESMARHGV 188
           D+ +    N   +    D V+H AA+  V  S  DP+     NI    L +L +     V
Sbjct: 89  DIRNLDDCNNACAG--VDYVLHQAALGSVPRSINDPITSNATNIDG-FLNMLIAARDAKV 145

Query: 189 DTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDM 240
            +  Y+++ +TYG+   +P  E+T   P++PY   K + E     FS+    
Sbjct: 146 QSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNELYADVFSRCYGF 197

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} Length = 311

 Score =  153 bits (389), Expect = 2e-45
 Identities = 31/169 (18%), Positives = 59/169 (34%), Gaps = 19/169 (11%)

Query: 72  HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
            + VTGG G++G +    +  D     I+                       +      +
Sbjct: 4   KIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNK---------------AINDYEYRV 48

Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTL 191
            D    +     N  DAV+H AA         +    + N    T  + ++   + +  +
Sbjct: 49  SDYTLEDLINQLNDVDAVVHLAATRGSQGKISEF---HDNEIL-TQNLYDACYENNISNI 104

Query: 192 IYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDM 240
           +Y+ST + Y +   +P  E+    P   YG +K   E I   +S+   +
Sbjct: 105 VYASTISAYSDETSLPWNEKELPLPDLMYGVSKLACEHIGNIYSRKKGL 153

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} Length = 321

 Score =  152 bits (387), Expect = 4e-45
 Identities = 48/176 (27%), Positives = 76/176 (43%), Gaps = 14/176 (7%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           +L+TGGAG+IG H A  L+     VT++D+L    +   +   +   +P   +    DL 
Sbjct: 10  ILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFLEKPVL-ELEERDLS 68

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
           D               V H A+   V  S   PL Y  N+ S    +L      GV  ++
Sbjct: 69  D------------VRLVYHLASHKSVPRSFKQPLDYLDNVDS-GRHLLALCTSVGVPKVV 115

Query: 193 YSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVLQCHRF 248
             STC  YG+ + +P  E++P +P +PY  +K   E +     + S    +   RF
Sbjct: 116 VGSTCEVYGQADTLPTPEDSPLSPRSPYAASKVGLEMVAGAHQRASVAPEVGIVRF 171

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* Length = 351

 Score =  151 bits (383), Expect = 3e-44
 Identities = 52/173 (30%), Positives = 80/173 (46%), Gaps = 8/173 (4%)

Query: 72  HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRG---NIGAVKVLQELFPEPGRLQFIY 128
             L+TG AG+IGS+   +LLK +  V  +DN S G   N+  VK L        R  FI 
Sbjct: 27  TWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWS-RFCFIE 85

Query: 129 ADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYH-NITSNTLVVLESMARHG 187
            D+ D     +       D V+H AA+  V  S +DP+     NIT   L +L +     
Sbjct: 86  GDIRDLTTCEQVMKG--VDHVLHQAALGSVPRSIVDPITTNATNITG-FLNILHAAKNAQ 142

Query: 188 VDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDM 240
           V +  Y+++ +TYG+   +P  EE    P++PY   K + E     +++    
Sbjct: 143 VQSFTYAASSSTYGDHPALPKVEENIGNPLSPYAVTKYVNEIYAQVYARTYGF 195

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} Length = 267

 Score =  143 bits (362), Expect = 6e-42
 Identities = 44/177 (24%), Positives = 71/177 (40%), Gaps = 20/177 (11%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           +LVTG AG +GS     L   ++ V + D +  G                  + +  DL 
Sbjct: 5   LLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGA------------AEAHEEIVACDLA 52

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
           DA+AV+    +   D ++H   V  V     D L+   NI      + E+    G   ++
Sbjct: 53  DAQAVHDLVKD--CDGIIHLGGV-SVERPWNDILQ--ANIIG-AYNLYEAARNLGKPRIV 106

Query: 193 YSSTCATYGE-PEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVLQCHRF 248
           ++S+  T G  P    I  E P+ P + YG +K   ED+   +    D+  L   R 
Sbjct: 107 FASSNHTIGYYPRTTRIDTEVPRRPDSLYGLSKCFGEDLASLYYHKFDIETL-NIRI 162

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* Length = 317

 Score =  135 bits (343), Expect = 9e-39
 Identities = 36/167 (21%), Positives = 72/167 (43%), Gaps = 18/167 (10%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIV-DNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
           +LVTG +G IG+     L +   +  ++  ++ + +              G ++FI  D+
Sbjct: 2   ILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRD-------------TGGIKFITLDV 48

Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYH-NITSNTLVVLESMARHGVDT 190
            +   +++   + + DA+ H A +    +   DP   Y  N+   T  +LE+  +H V+ 
Sbjct: 49  SNRDEIDRAVEKYSIDAIFHLAGILSA-KGEKDPALAYKVNMNG-TYNILEAAKQHRVEK 106

Query: 191 LIYSSTCATYG-EPEKMPITEETPQAPINPYGKAKKMAEDIILDFSK 236
           ++  ST   +G E  K  +   T   P   +G  K  AE +   + +
Sbjct: 107 VVIPSTIGVFGPETPKNKVPSITITRPRTMFGVTKIAAELLGQYYYE 153

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 Length = 310

 Score =  135 bits (342), Expect = 1e-38
 Identities = 37/173 (21%), Positives = 69/173 (39%), Gaps = 19/173 (10%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRG----NIGAVKVLQELFPEPGRLQFI 127
           ++VTGGAG+IGS+    L       + +VDNL  G    N+  + +   +  E       
Sbjct: 2   IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLNIADYMDKE------- 54

Query: 128 YADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHG 187
             D        + F +   +A+ H  A +   E     +   +N    +  +L       
Sbjct: 55  --DFLIQIMAGEEFGD--VEAIFHEGACSSTTEWDGKYM-MDNNYQY-SKELLHYCLERE 108

Query: 188 VDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDM 240
           +   +Y+S+ ATYG      I     + P+N YG +K + ++ +      ++ 
Sbjct: 109 IP-FLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILPEANS 160

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* Length = 267

 Score =  130 bits (329), Expect = 4e-37
 Identities = 40/179 (22%), Positives = 65/179 (36%), Gaps = 24/179 (13%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           +LVTG AG +G     RL   +  + + D            L  L P     + +  DL 
Sbjct: 6   LLVTGAAGQLGRVMRERLAPMAEILRLAD------------LSPLDPAGPNEECVQCDLA 53

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYH--NITSNTLVVLESMARHGVDT 190
           DA AVN   +    D ++H         S   P +     NI      + E+   HG   
Sbjct: 54  DANAVNAMVAG--CDGIVHLGG-----ISVEKPFEQILQGNIIG-LYNLYEAARAHGQPR 105

Query: 191 LIYSSTCATYGE-PEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVLQCHRF 248
           ++++S+  T G  P+   +  + P  P   YG +K   E++   +            R 
Sbjct: 106 IVFASSNHTIGYYPQTERLGPDVPARPDGLYGVSKCFGENLARMYFDKFGQETA-LVRI 163

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* Length = 357

 Score =  132 bits (334), Expect = 6e-37
 Identities = 36/169 (21%), Positives = 66/169 (39%), Gaps = 11/169 (6%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
           ++VTGGAG+IGS+    L       + +VDNL  G       L +L            D 
Sbjct: 49  IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGT--KFVNLVDLNI---ADYMDKEDF 103

Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTL 191
                  + F +   +A+ H  A +   E     +   +N    +  +L       +   
Sbjct: 104 LIQIMAGEEFGD--VEAIFHEGACSSTTEWDGKYM-MDNNYQY-SKELLHYCLEREI-PF 158

Query: 192 IYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDM 240
           +Y+S+ ATYG      I     + P+N +G +K + ++ +      ++ 
Sbjct: 159 LYASSAATYGGRTSDFIESREYEKPLNVFGYSKFLFDEYVRQILPEANS 207

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} Length = 312

 Score =  127 bits (322), Expect = 1e-35
 Identities = 29/167 (17%), Positives = 54/167 (32%), Gaps = 15/167 (8%)

Query: 73  VLVTGGAGYIGSHAALRLLKDS-YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
           +L+ G  G IG+    +L K       I  ++ + N   V              F   + 
Sbjct: 5   ILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTDVVN----------SGPFEVVNA 54

Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYH-NITSNTLVVLESMARHGVDT 190
            D   +      +    +   AA+     +  +P   +  N+ S    VL       +  
Sbjct: 55  LDFNQIEHLVEVHKITDIYLMAALLSA-TAEKNPAFAWDLNMNS-LFHVLNLAKAKKIKK 112

Query: 191 LIYSSTCATYGEPEKMPITEE-TPQAPINPYGKAKKMAEDIILDFSK 236
           + + S+ A +G       T + T   P   YG +K+  E     +  
Sbjct: 113 IFWPSSIAVFGPTTPKENTPQYTIMEPSTVYGISKQAGERWCEYYHN 159

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} Length = 362

 Score =  126 bits (319), Expect = 8e-35
 Identities = 39/182 (21%), Positives = 75/182 (41%), Gaps = 14/182 (7%)

Query: 73  VLVTGGAGYIGSHAALRLLKD--SYRVTIVDNLSRGNIGAVKVLQELFP----EPGRLQF 126
           +L+TGGAG++GS+ A    ++    +V ++D      + +      L         + + 
Sbjct: 13  ILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEV 72

Query: 127 IYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARH 186
           I AD+ +   + +    + FD + H AAV+       +            L +LE     
Sbjct: 73  IAADINNPLDLRRLEKLH-FDYLFHQAAVSDTTML--NQELVMKTNYQAFLNLLEIARSK 129

Query: 187 GVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVLQCH 246
               +IY+S+   YG  +  P      ++P N YG +K   ++ +L  S ++    L   
Sbjct: 130 KAK-VIYASSAGVYGNTK-APNVVGKNESPENVYGFSKLCMDEFVLSHSNDNVQVGL--- 184

Query: 247 RF 248
           R+
Sbjct: 185 RY 186

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* Length = 377

 Score =  125 bits (317), Expect = 2e-34
 Identities = 44/185 (23%), Positives = 73/185 (39%), Gaps = 17/185 (9%)

Query: 60  PSPFSQHEEGVTHVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELF 118
           P   +  +   T+V+V GGAG++GS+   RLL+    +V +VDNL       V       
Sbjct: 22  PVIMNASKLANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINV------- 74

Query: 119 PEPGRLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLV 178
           P+   ++F    + D   +     E  +D V H A       S  DPL  + N T  TL 
Sbjct: 75  PDHPAVRFSETSITDDALLASLQDE--YDYVFHLATYHGNQSSIHDPLADHENNTLTTLK 132

Query: 179 VLESMARH-GVDTLIYSSTCATYGEPEKMPITEE------TPQAPINPYGKAKKMAEDII 231
           + E +     +  ++YS+   +  E               +     +PY  +K   E   
Sbjct: 133 LYERLKHFKRLKKVVYSAAGCSIAEKTFDDAKATEETDIVSLHNNDSPYSMSKIFGEFYS 192

Query: 232 LDFSK 236
           + + K
Sbjct: 193 VYYHK 197

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 Length = 347

 Score =  109 bits (274), Expect = 3e-28
 Identities = 45/172 (26%), Positives = 76/172 (44%), Gaps = 26/172 (15%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSR-GNIGAVKVLQELFPEPGRLQFIYADL 131
           +L+TGG G++GS+ A   L     + + DNLSR G    +  L  L    G  +F++ D+
Sbjct: 4   LLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSL----GNFEFVHGDI 59

Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYH-NITSNTLVVLESMARHGVDT 190
            +   V +  ++   D+  H A    +  S  +P   +  N+   TL +LE++ ++  + 
Sbjct: 60  RNKNDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGG-TLNLLEAVRQYNSNC 118

Query: 191 -LIYSSTCATYGEPEKMPI----------------TEETPQAPINPYG--KA 223
            +IYSST   YG+ E+                    E T     +PYG  K 
Sbjct: 119 NIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKG 170

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* Length = 379

 Score =  107 bits (270), Expect = 1e-27
 Identities = 35/181 (19%), Positives = 69/181 (38%), Gaps = 25/181 (13%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           + +TG  G+I SH A RL  + + V   D     ++       E        +F   DL 
Sbjct: 32  ISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHM------TEDMFCD---EFHLVDLR 82

Query: 133 DAKAVNKFFSENAFDAVMHFAAVA----YVGESTLDPLKYYHNITSNTLVVLESMARHGV 188
             +   K       D V + AA      ++     +     +N T  +  ++E+   +G+
Sbjct: 83  VMENCLKVTEG--VDHVFNLAADMGGMGFIQS---NHSVIMYNNTMISFNMIEAARINGI 137

Query: 189 DTLIYSSTCATYGEPEKMPITEET-------PQAPINPYGKAKKMAEDIILDFSKNSDMA 241
               Y+S+   Y E +++  T  +       P  P + +G  K   E++   ++K+  + 
Sbjct: 138 KRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDFGIE 197

Query: 242 V 242
            
Sbjct: 198 C 198

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342

 Score =  103 bits (260), Expect = 2e-26
 Identities = 24/171 (14%), Positives = 53/171 (30%), Gaps = 20/171 (11%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
             V G  G +G HAA  +    + + +   + R     ++ L  L       +   A++ 
Sbjct: 16  YAVLGATGLLGHHAARAIRAAGHDLVL---IHR-PSSQIQRLAYL-----EPECRVAEML 66

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYH-NITSNTLVVLESMARHGVDTL 191
           D   + +       D V+  A             +     +   T     +  +  V  +
Sbjct: 67  DHAGLERALRG--LDGVIFSAGY--YPSRPRRWQEEVASALGQ-TNPFYAACLQARVPRI 121

Query: 192 IYSSTCATYGE-PEKMPITEETPQAP----INPYGKAKKMAEDIILDFSKN 237
           +Y  +       P+ +P  E           + Y   K   ++   + ++N
Sbjct: 122 LYVGSAYAMPRHPQGLPGHEGLFYDSLPSGKSSYVLCKWALDEQAREQARN 172

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} Length = 372

 Score = 99.1 bits (247), Expect = 2e-24
 Identities = 34/172 (19%), Positives = 68/172 (39%), Gaps = 16/172 (9%)

Query: 72  HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
            VL+ G  G+IG H + R+L+ +       ++    +       +L     R+ F   D+
Sbjct: 26  KVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRL------GDLVKHE-RMHFFEGDI 78

Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTL 191
              K   ++  +   D ++   A+A        PL+ +       L ++ S  ++G   L
Sbjct: 79  TINKEWVEYHVKK-CDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYGK-HL 136

Query: 192 IYSSTCATYG---EPEKMPITEETPQAPINP----YGKAKKMAEDIILDFSK 236
           ++ ST   YG   + +  P        PIN     Y  +K++ + +I  +  
Sbjct: 137 VFPSTSEVYGMCADEQFDPDASALTYGPINKPRWIYACSKQLMDRVIWGYGM 188

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A Length = 345

 Score = 92.8 bits (231), Expect = 2e-22
 Identities = 36/170 (21%), Positives = 67/170 (39%), Gaps = 18/170 (10%)

Query: 73  VLVTGGAGYIGSHAALRLLKD-SYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
           VL+ G  G+IG+H   RLL++  Y V  +D  S         +      P    F+  D+
Sbjct: 3   VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDA-------ISRFLNHP-HFHFVEGDI 54

Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTL 191
                  ++  +   D V+   A+A   E T +PL+ +       L ++    ++    +
Sbjct: 55  SIHSEWIEYHVKKC-DVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRK-RI 112

Query: 192 IYSSTCATYGEPEKMPITEETPQAPINP-------YGKAKKMAEDIILDF 234
           I+ ST   YG        E+     + P       Y  +K++ + +I  +
Sbjct: 113 IFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAY 162

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A* Length = 337

 Score = 91.4 bits (228), Expect = 8e-22
 Identities = 55/186 (29%), Positives = 86/186 (46%), Gaps = 30/186 (16%)

Query: 72  HVLVTGGAGYIGSHAALRLLKDS------YRVTIVDNLS-RGNIGAVKVLQELFPEPGRL 124
            +LVTGGAG+IGSH   +LL  +        V ++D+L+  GN      L  +  +P RL
Sbjct: 2   RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRAN---LAPVDADP-RL 57

Query: 125 QFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSN---TLVVLE 181
           +F++ D+ DA  + +       DA++HFAA ++V  S      +     +N   T  +L+
Sbjct: 58  RFVHGDIRDAGLLARELRG--VDAIVHFAAESHVDRSIAGASVF---TETNVQGTQTLLQ 112

Query: 182 SMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMA 241
                GV  +++ ST   YG  +    TE +P  P +PY  A K            SD+ 
Sbjct: 113 CAVDAGVGRVVHVSTNQVYGSIDSGSWTESSPLEPNSPYA-ASKAG----------SDLV 161

Query: 242 VLQCHR 247
               HR
Sbjct: 162 ARAYHR 167

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis} Length = 346

 Score = 91.0 bits (227), Expect = 1e-21
 Identities = 45/164 (27%), Positives = 84/164 (51%), Gaps = 15/164 (9%)

Query: 73  VLVTGGAGYIGSHAALRLLK--DSYRVTIVDNLS-RGNIGAVKVLQELFPEPGRLQFIYA 129
           +LVTGGAG+IGS+    +L+  ++Y++   D L+  GN+     ++ +   P    F+  
Sbjct: 27  ILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNN---VKSIQDHP-NYYFVKG 82

Query: 130 DLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSN---TLVVLESMARH 186
           ++ + + +     E     +++FAA ++V  S  +P+ +     +N   T+ +LE + ++
Sbjct: 83  EIQNGELLEHVIKERDVQVIVNFAAESHVDRSIENPIPF---YDTNVIGTVTLLELVKKY 139

Query: 187 GVDTLIYSSTCATYGE-PEKMPITEETPQAPINPYGKAKKMAED 229
               L+  ST   YG   +    TEETP AP +PY  + K + D
Sbjct: 140 PHIKLVQVSTDEVYGSLGKTGRFTEETPLAPNSPY-SSSKASAD 182

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* Length = 343

 Score = 90.1 bits (224), Expect = 2e-21
 Identities = 50/176 (28%), Positives = 80/176 (45%), Gaps = 17/176 (9%)

Query: 72  HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
            +L+TGGAG++GSH   +L+ D + VT+VDN   G     + ++         + I  D+
Sbjct: 29  RILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRK---RNVEHWIGHE-NFELINHDV 84

Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTL 191
                V   + E   D + H A+ A       +P+K     T  TL +L    R G   L
Sbjct: 85  -----VEPLYIE--VDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA-RL 136

Query: 192 IYSSTCATYGEPEKMPITEE-----TPQAPINPYGKAKKMAEDIILDFSKNSDMAV 242
           + +ST   YG+PE  P +E+      P  P   Y + K++AE +   + K   + V
Sbjct: 137 LLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEV 192

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A Length = 369

 Score = 90.4 bits (224), Expect = 2e-21
 Identities = 23/171 (13%), Positives = 51/171 (29%), Gaps = 49/171 (28%)

Query: 73  VLVTGGAGYIGSHAALRLLKD-SYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
           +++TG  G++G +    L     + +  V   +                           
Sbjct: 3   IVITGAKGFVGKNLKADLTSTTDHHIFEVHRQT--------------------------- 35

Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTL 191
              + +     +   D ++H A V           ++     S    VL+ + R+     
Sbjct: 36  -KEEELESALLK--ADFIVHLAGVNRP----EHDKEFSLGNVSYLDHVLDILTRNTKKPA 88

Query: 192 IYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAV 242
           I  S+                     NPYG++K   E ++ ++++     V
Sbjct: 89  ILLSS--------------SIQATQDNPYGESKLQGEQLLREYAEEYGNTV 125

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A* Length = 348

 Score = 87.2 bits (217), Expect = 3e-20
 Identities = 44/164 (26%), Positives = 78/164 (47%), Gaps = 23/164 (14%)

Query: 72  HVLVTGGAGYIGSHAALRLLKD--SYRVTIVDNLS-RGNIGAVKVLQELFPEPGRLQFIY 128
           +++VTGGAG+IGS+    +  +     VT++D L+  GN   ++ +        R++ + 
Sbjct: 6   NIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAI-----LGDRVELVV 60

Query: 129 ADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYH-NITSNTLVVLESMARHG 187
            D+ DA+ V+K  ++   DA++H+AA ++   S  DP  + H N    T  +LE+  ++ 
Sbjct: 61  GDIADAELVDKLAAK--ADAIVHYAAESHNDNSLNDPSPFIHTNFIG-TYTLLEAARKYD 117

Query: 188 V-------D----TLIYSSTCATYGEPEKMPITEETPQAPINPY 220
           +       D     L        +GE      T ET   P +PY
Sbjct: 118 IRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPY 161

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii} Length = 336

 Score = 86.4 bits (215), Expect = 4e-20
 Identities = 51/165 (30%), Positives = 77/165 (46%), Gaps = 17/165 (10%)

Query: 72  HVLVTGGAGYIGSHAALRLLKD--SYRVTIVDNLS-RGNIGAVKVLQELFPEPGRLQFIY 128
            +LVTGG G+IGS+    +L+    + V  +D L    N   +K L++   +P R  F+ 
Sbjct: 5   KLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKDLED---DP-RYTFVK 60

Query: 129 ADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSN---TLVVLESMAR 185
            D+ D + V +   +   D V+H AA ++V  S   P  +   + SN   T  +LES+ R
Sbjct: 61  GDVADYELVKELVRK--VDGVVHLAAESHVDRSISSPEIF---LHSNVIGTYTLLESIRR 115

Query: 186 HGVDTLIYS-STCATYGEPEKMPITEETPQAPINPYGKAKKMAED 229
              +      ST   YG+  K   TE     P +PY  A K A D
Sbjct: 116 ENPEVRFVHVSTDEVYGDILKGSFTENDRLMPSSPY-SATKAASD 159

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A* Length = 361

 Score = 83.7 bits (208), Expect = 5e-19
 Identities = 54/183 (29%), Positives = 80/183 (43%), Gaps = 34/183 (18%)

Query: 72  HVLVTGGAGYIGSHAALRLLKDS-YRVTIVDNLS-RGNIGAVKVLQELFPEPGRLQFIYA 129
            +L+TGGAG+IGS     ++K++   V  +D L+  GN+ +   L ++     R  F +A
Sbjct: 2   KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLES---LSDISESN-RYNFEHA 57

Query: 130 DLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSN---TLVVLESMARH 186
           D+ D+  + + F +   DAVMH AA ++V  S   P  +   I +N   T  +LE  AR 
Sbjct: 58  DICDSAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAF---IETNIVGTYALLEV-ARK 113

Query: 187 GVDTLIYS----------STCATYG----------EPEKMPITEETPQAPINPYGKAKKM 226
               L             ST   YG                 TE T  AP +PY  A K 
Sbjct: 114 YWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPY-SASKA 172

Query: 227 AED 229
           + D
Sbjct: 173 SSD 175

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} Length = 227

 Score = 81.3 bits (201), Expect = 8e-19
 Identities = 27/174 (15%), Positives = 60/174 (34%), Gaps = 21/174 (12%)

Query: 68  EGVTHVLVTGGAGYIGSHAALRLLKDSYRVT-IVDNLSRGNIGAVKVLQELFPEPGRLQF 126
           E V  +++ G +G++GS      L   + VT +V +  +           +  E   L+ 
Sbjct: 2   EKVKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEK-----------IKIENEHLKV 50

Query: 127 IYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARH 186
             AD+     V +       DAV+      +      D            L +++ + + 
Sbjct: 51  KKADVSSLDEVCEVC--KGADAVISAFNPGWNNPDIYDET------IKVYLTIIDGVKKA 102

Query: 187 GVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDM 240
           GV+  +      +      + +  ++ + P N     K + E  +    K  ++
Sbjct: 103 GVNRFLMVGGAGSLFIAPGLRLM-DSGEVPENILPGVKALGEFYLNFLMKEKEI 155

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* Length = 337

 Score = 81.1 bits (201), Expect = 3e-18
 Identities = 45/204 (22%), Positives = 68/204 (33%), Gaps = 56/204 (27%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRV-TIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
           V VTG +G+IGS   +RLL+  Y V   V + +      VK L +L      L    ADL
Sbjct: 8   VCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVK--KVKHLLDLPKAETHLTLWKADL 65

Query: 132 GDAKAVNKFFSENAFDA-------VMHFAAVAYVGESTLDPLKYYHNITSN--------- 175
            D         E +FD        V H A           P                   
Sbjct: 66  AD---------EGSFDEAIKGCTGVFHVAT----------P--MDFESKDPENEVIKPTI 104

Query: 176 --TLVVLESMARHG-VDTLIYSSTCAT--YGEPEKMPITE---------ETPQAPINPYG 221
              L +++S A    V  L+++S+  T    E +     E            +     Y 
Sbjct: 105 EGMLGIMKSCAAAKTVRRLVFTSSAGTVNIQEHQLPVYDESCWSDMEFCRAKKMTAWMYF 164

Query: 222 KAKKMAEDIILDFSKNS--DMAVL 243
            +K +AE     ++K +  D   +
Sbjct: 165 VSKTLAEQAAWKYAKENNIDFITI 188

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} Length = 322

 Score = 78.4 bits (194), Expect = 3e-17
 Identities = 44/205 (21%), Positives = 75/205 (36%), Gaps = 57/205 (27%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRV--TIVDNLSRGNIGAVKVLQELFPEPGRLQFIYAD 130
           V VTGG G++GS     LL++ Y V  TI  +  R     V  L  L     +L F  AD
Sbjct: 4   VCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRD--VSFLTNLPGASEKLHFFNAD 61

Query: 131 LGDAKAVNKFFSENAFDA-------VMHFAAVAYVGESTLDPLKYYHNITSN-------- 175
           L +          ++F A       + H A+          P      ++          
Sbjct: 62  LSN---------PDSFAAAIEGCVGIFHTAS----------P--IDFAVSEPEEIVTKRT 100

Query: 176 ---TLVVLESMARHG-VDTLIYSSTCAT--YGEPEKMPITEE---------TPQAPINPY 220
               L +L++      V   IY+S+ +   +   +K  + E          + +     Y
Sbjct: 101 VDGALGILKACVNSKTVKRFIYTSSGSAVSFNGKDKDVLDESDWSDVDLLRSVKPFGWNY 160

Query: 221 GKAKKMAEDIILDFSKNS--DMAVL 243
             +K +AE  +L+F + +  D+  L
Sbjct: 161 AVSKTLAEKAVLEFGEQNGIDVVTL 185

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A Length = 338

 Score = 77.7 bits (192), Expect = 6e-17
 Identities = 46/215 (21%), Positives = 75/215 (34%), Gaps = 59/215 (27%)

Query: 64  SQHEEGVTHVLVTGGAGYIGSHAALRLLKDSYRV-TIVDNLSRGNIGAVKVLQELFPEPG 122
           +QH  G     V GG G++ S     LL+  Y V T V +        V  L EL  E G
Sbjct: 3   TQHPIGKKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQK--KVSHLLEL-QELG 59

Query: 123 RLQFIYADLGDAKAVNKFFSENAFDA-------VMHFAAVAYVGESTLDPLKYYHNITSN 175
            L+   ADL D         E +F+A       V H A           P   +      
Sbjct: 60  DLKIFRADLTD---------ELSFEAPIAGCDFVFHVAT----------P--VHFASEDP 98

Query: 176 -----------TLVVLESMAR-HGVDTLIYSSTCAT----YGEPEKMPITEE-------- 211
                       + V+++  R   V  +I +S+ A       +   + + E+        
Sbjct: 99  ENDMIKPAIQGVVNVMKACTRAKSVKRVILTSSAAAVTINQLDGTGLVVDEKNWTDIEFL 158

Query: 212 -TPQAPINPYGKAKKMAEDIILDFSKNS--DMAVL 243
            + + P   Y  +K +AE     F++ +  D+  +
Sbjct: 159 TSAKPPTWGYPASKTLAEKAAWKFAEENNIDLITV 193

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} Length = 321

 Score = 73.8 bits (182), Expect = 1e-15
 Identities = 43/156 (27%), Positives = 72/156 (46%), Gaps = 18/156 (11%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            L+TG AG++G + A  L + +  V      SR N   +            ++ I  D+ 
Sbjct: 15  ALITGVAGFVGKYLANHLTEQNVEVF---GTSRNNEAKLP----------NVEMISLDIM 61

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSN-TLVVLESMARHGVDTL 191
           D++ V K  S+   D + H AA + V +S L+      +     TL VL+++    +D  
Sbjct: 62  DSQRVKKVISDIKPDYIFHLAAKSSVKDSWLNKK-GTFSTNVFGTLHVLDAVRDSNLDCR 120

Query: 192 IY-SSTCATYG--EPEKMPITEETPQAPINPYGKAK 224
           I    +   YG   PE+ P++EE    P++PYG +K
Sbjct: 121 ILTIGSSEEYGMILPEESPVSEENQLRPMSPYGVSK 156

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* Length = 357

 Score = 67.6 bits (165), Expect = 2e-13
 Identities = 39/178 (21%), Positives = 63/178 (35%), Gaps = 7/178 (3%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           V VTG  G+ G   +L L      V             V  L E       +Q    D+ 
Sbjct: 12  VFVTGHTGFKGGWLSLWLQTMGATVKGYSL----TAPTVPSLFETARVADGMQSEIGDIR 67

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMAR-HGVDTL 191
           D   + +   E   + V H AA   V  S  +P++ Y      T+ +LE++    GV  +
Sbjct: 68  DQNKLLESIREFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAV 127

Query: 192 IYSSTCATYGEPE-KMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVLQCHRF 248
           +  ++   Y   E      E       +PY  +K  AE ++    +NS        + 
Sbjct: 128 VNITSDKCYDNKEWIWGYRENEAMGGYDPYSNSKGCAE-LVTSSYRNSFFNPANYGQH 184

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} Length = 286

 Score = 66.7 bits (163), Expect = 3e-13
 Identities = 29/163 (17%), Positives = 58/163 (35%), Gaps = 20/163 (12%)

Query: 72  HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
            +L+ G  G +G   A RL    + VT    L R          +  P    +Q + AD+
Sbjct: 5   KILIAG-CGDLGLELARRLTAQGHEVTG---LRRS--------AQPMPA--GVQTLIADV 50

Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTL 191
                +         + +++  A +   +        Y     N    L ++    +  +
Sbjct: 51  TRPDTLASI-VHLRPEILVYCVAASEYSDE--HYRLSYVEGLRN---TLSALEGAPLQHV 104

Query: 192 IYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDF 234
            + S+   YG+  +  + E+TP    +  GK    AE ++  +
Sbjct: 105 FFVSSTGVYGQEVEEWLDEDTPPIAKDFSGKRMLEAEALLAAY 147

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A Length = 342

 Score = 62.3 bits (152), Expect = 2e-11
 Identities = 38/208 (18%), Positives = 66/208 (31%), Gaps = 67/208 (32%)

Query: 71  THVLVTGGAGYIGSHAALRLLKDSYRV-TIVDNLSRGNIGAVKVLQELFPEPGRLQFIY- 128
           + VLVTG  G++ SH   +LL+  Y+V     + S+        LQ+ +      +F   
Sbjct: 12  SLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKL-----ANLQKRWDAKYPGRFETA 66

Query: 129 --ADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYH-----NITSN------ 175
              D+           + A+D V      A V           H     + ++       
Sbjct: 67  VVEDMLK---------QGAYDEV--IKGAAGV----------AHIASVVSFSNKYDEVVT 105

Query: 176 -----TLVVLESMARHG-VDTLIYSSTCAT----YGEPEKMPITEET------------- 212
                TL  L + A    V   + +S+  +        E + + E++             
Sbjct: 106 PAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLP 165

Query: 213 ---PQAPINPYGKAKKMAEDIILDFSKN 237
              PQ  +  Y  +K  AE     F   
Sbjct: 166 ESDPQKSLWVYAASKTEAELAAWKFMDE 193

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* Length = 364

 Score = 62.1 bits (150), Expect = 2e-11
 Identities = 35/174 (20%), Positives = 51/174 (29%), Gaps = 25/174 (14%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTI--VDNLSRGNIGAVKVLQELFPEPGRLQFIYAD 130
            L+ G  G IG+  A  L           V  ++R    A         E   + ++  D
Sbjct: 4   ALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW-------HEDNPINYVQCD 56

Query: 131 LGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNI--TSNTLVVLESMARH-- 186
           + D        S      V H   V +   ST        N     N L  +     +  
Sbjct: 57  ISDPDDSQAKLS--PLTDVTHVFYVTWANRSTEQEN-CEANSKMFRNVLDAVIPNCPNLK 113

Query: 187 ----GVDTLIYSSTCATYG--EPEKMPITEETPQAPINPYGKAKKMAEDIILDF 234
                     Y     +YG  E    P TE+ P+     Y       EDI+L+ 
Sbjct: 114 HISLQTGRKHYMGPFESYGKIESHDPPYTEDLPRL---KYMNFYYDLEDIMLEE 164

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* Length = 206

 Score = 58.5 bits (142), Expect = 9e-11
 Identities = 29/172 (16%), Positives = 55/172 (31%), Gaps = 37/172 (21%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVT-IVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
           + + G  G  G     + ++  Y VT +V + SR        L    P       +  D+
Sbjct: 6   IAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSR--------LPSEGPR--PAHVVVGDV 55

Query: 132 GDAKAVNKFFSENAF---DAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV 188
             A  V     +      DAV+          + L P         N   ++ +M  HGV
Sbjct: 56  LQAADV-----DKTVAGQDAVIV----LLGTRNDLSPTTVMSEGARN---IVAAMKAHGV 103

Query: 189 DTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDM 240
           D ++  ++     +P K+P         +            ++    + S +
Sbjct: 104 DKVVACTSAFLLWDPTKVP-------PRLQAVTDDHIRMHKVL----RESGL 144

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 Length = 660

 Score = 60.4 bits (147), Expect = 1e-10
 Identities = 41/207 (19%), Positives = 74/207 (35%), Gaps = 21/207 (10%)

Query: 33  FAGKFILAAALTALCIFLLKQSPTFSSPSPFSQHEEGVTHVLVTGGAGYIGSHAALRLLK 92
                 +  +        L Q    +S  P        T VL+ G  G+IG+H   RLL+
Sbjct: 281 AGDGITMQGS-QLAQTLGLVQGSRLNSQ-PACTARR-RTRVLILGVNGFIGNHLTERLLR 337

Query: 93  D-SYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVMH 151
           +  Y V  +D  S         +      P    F+  D+       ++  +   D V+ 
Sbjct: 338 EDHYEVYGLDIGS-------DAISRFLNHP-HFHFVEGDISIHSEWIEYHVKKC-DVVLP 388

Query: 152 FAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEE 211
             A+A   E T +PL+ +       L ++    ++    +I+ ST   YG        E+
Sbjct: 389 LVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR-KRIIFPSTSEVYGMCSDKYFDED 447

Query: 212 TPQAPINP-------YGKAKKMAEDII 231
                + P       Y  +K++ + +I
Sbjct: 448 HSNLIVGPVNKPRWIYSVSKQLLDRVI 474

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2 Length = 335

 Score = 57.6 bits (140), Expect = 6e-10
 Identities = 46/162 (28%), Positives = 70/162 (43%), Gaps = 18/162 (11%)

Query: 74  LVTGGAGYIGSHAALRLLKDSYRV------TIVDNLSRGNIGAVKVLQELFPEPGRLQFI 127
           LVTG  G  G++ A  LL+  YRV         D   R        L+EL  E   +Q+ 
Sbjct: 18  LVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWR--------LRELGIEG-DIQYE 68

Query: 128 YADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITS-NTLVVLESMARH 186
             D+ DA +V +   +     V + AA ++VG S   P+     +       +LE++ + 
Sbjct: 69  DGDMADACSVQRAVIKAQPQEVYNLAAQSFVGASWNQPV-TTGVVDGLGVTHLLEAIRQF 127

Query: 187 GVDTLIY-SSTCATYGEPEKMPITEETPQAPINPYGKAKKMA 227
             +T  Y +ST   +G  +     E TP  P +PYG AK   
Sbjct: 128 SPETRFYQASTSEMFGLIQAERQDENTPFYPRSPYGVAKLYG 169

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} Length = 221

 Score = 53.4 bits (128), Expect = 7e-09
 Identities = 22/171 (12%), Positives = 47/171 (27%), Gaps = 26/171 (15%)

Query: 72  HVLVTGGAGYIGSHAALRLLKDSYRVT-IVDNLSRGNIGAVKVLQELFPEPGRLQFIYAD 130
            + + G  G  GS          + VT IV N  +           +      +  +  D
Sbjct: 2   KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGK-----------ITQTHKDINILQKD 50

Query: 131 LGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDT 190
           + D          +  + V+   A     +     +    ++       +  +       
Sbjct: 51  IFDLTLS----DLSDQNVVVD--AYGISPDEAEKHVTSLDHL-------ISVLNGTVSPR 97

Query: 191 LIYSSTCATYGEPEKMPITEETPQAPINPY-GKAKKMAEDIILDFSKNSDM 240
           L+     A+    E      E+      PY   A+  A+ +    S  ++ 
Sbjct: 98  LLVVGGAASLQIDEDGNTLLESKGLREAPYYPTARAQAKQLEHLKSHQAEF 148

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A* Length = 345

 Score = 53.8 bits (130), Expect = 1e-08
 Identities = 45/162 (27%), Positives = 75/162 (46%), Gaps = 18/162 (11%)

Query: 74  LVTGGAGYIGSHAALRLLKDSYRV------TIVDNLSRGNIGAVKVLQELFPEPGRLQFI 127
           L+TG  G  G++ A  LL+  Y V      +      R        L+EL  E   ++ I
Sbjct: 7   LITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWR--------LKELGIEN-DVKII 57

Query: 128 YADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITS-NTLVVLESMARH 186
           + DL +   + +   +   D V + AA ++VG S   P+     + +   L +LE++   
Sbjct: 58  HMDLLEFSNIIRTIEKVQPDEVYNLAAQSFVGVSFEQPI-LTAEVDAIGVLRILEALRTV 116

Query: 187 GVDTLIY-SSTCATYGEPEKMPITEETPQAPINPYGKAKKMA 227
             DT  Y +ST   +G+ +++P TE+TP  P +PY  AK   
Sbjct: 117 KPDTKFYQASTSEMFGKVQEIPQTEKTPFYPRSPYAVAKLFG 158

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} Length = 219

 Score = 52.7 bits (127), Expect = 1e-08
 Identities = 22/168 (13%), Positives = 53/168 (31%), Gaps = 27/168 (16%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           + + G  G +G      L    Y++      +R  +  V     +      + +   ++ 
Sbjct: 3   IFIVGSTGRVGKSLLKSLSTTDYQIYA---GAR-KVEQVPQYNNVKAVHFDVDWTPEEMA 58

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
                         DA+++ +         +D            + ++++  +  V   I
Sbjct: 59  KQLH--------GMDAIINVSGSGGKSLLKVD--------LYGAVKLMQAAEKAEVKRFI 102

Query: 193 YSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDM 240
             ST  +  +PEK           +  Y  AK  A+  +    K +++
Sbjct: 103 LLSTIFS-LQPEKWI---GAGFDALKDYYIAKHFADLYLT---KETNL 143

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} Length = 224

 Score = 52.7 bits (126), Expect = 1e-08
 Identities = 16/171 (9%), Positives = 43/171 (25%), Gaps = 23/171 (13%)

Query: 72  HVLVTGGAGYIGSHAALRLLKDSYRVT-IVDNLSRGNIGAVKVLQELFPEPGRLQFIYAD 130
            + V G  G  GS       +  + V  +V +  +              +          
Sbjct: 2   KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKA------------ADRLGATVATLV 49

Query: 131 LGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDT 190
                         + DAV+   +V +        L +  ++       +  +       
Sbjct: 50  KEPLVLTEADLD--SVDAVVDALSVPWGSGRGYLHLDFATHL-------VSLLRNSDTLA 100

Query: 191 LIYSSTCATYGEPEKMPITEETPQAPI-NPYGKAKKMAEDIILDFSKNSDM 240
           +    + +        P+  + P++    P+                N+++
Sbjct: 101 VFILGSASLAMPGADHPMILDFPESAASQPWYDGALYQYYEYQFLQMNANV 151

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} Length = 236

 Score = 52.1 bits (125), Expect = 2e-08
 Identities = 33/172 (19%), Positives = 55/172 (31%), Gaps = 34/172 (19%)

Query: 71  THVLVTGGAGYIGSHAALRLL-KDSYRVT-IVDNLSRGNIGAVKVLQELFPEPGRLQFIY 128
            +VL+ G  G I  H   +L  K + + T      ++        + + +P     Q I 
Sbjct: 24  KNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAK--------IHKPYPT--NSQIIM 73

Query: 129 ADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV 188
            D+ +  A+     + A          A +    LD              V+ +M    V
Sbjct: 74  GDVLNHAAL-----KQAMQGQ--DIVYANLTGEDLDIQ---------ANSVIAAMKACDV 117

Query: 189 DTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDM 240
             LI+  +   Y E        E   A I    K  + A D I    + S +
Sbjct: 118 KRLIFVLSLGIYDEV--PGKFVEWNNAVIGEPLKPFRRAADAI----EASGL 163

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} Length = 236

 Score = 51.2 bits (123), Expect = 5e-08
 Identities = 31/171 (18%), Positives = 55/171 (32%), Gaps = 34/171 (19%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           VLV G  G +  +    L    +       + R N      L+E     G    + A+L 
Sbjct: 24  VLVVGANGKVARYLLSELKNKGHEPVA---MVR-NEEQGPELRER----GASDIVVANLE 75

Query: 133 D--AKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDT 190
           +  + A        + DAV+ FAA +         +             ++   + G+  
Sbjct: 76  EDFSHAF------ASIDAVV-FAAGSGPHTGADKTILIDLWGAIK---TIQEAEKRGIKR 125

Query: 191 LIY-SSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDM 240
            I  SS               +     +  Y  AK++A+D +    K S +
Sbjct: 126 FIMVSSVGTV---------DPDQGPMNMRHYLVAKRLADDEL----KRSSL 163

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} Length = 478

 Score = 50.3 bits (120), Expect = 2e-07
 Identities = 38/225 (16%), Positives = 73/225 (32%), Gaps = 44/225 (19%)

Query: 53  QSPTFSSPSPFSQHEEGVTHVLVTGGAGYIGSHAALRLLKDSYRVT-------------- 98
            + T ++          +  VL+TG  G++G +  L LL+                    
Sbjct: 56  DADTLATAVNLPGPSPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDA 115

Query: 99  ---IVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAK-----AVNKFFSENAFDAVM 150
              +      G+   ++  +EL  +  RL+ +  D  +        + +  +E   D ++
Sbjct: 116 RRRLEKTFDSGDPELLRHFKELAAD--RLEVVAGDKSEPDLGLDQPMWRRLAETV-DLIV 172

Query: 151 HFAA-VAYVGESTL-DPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPI 208
             AA V       L  P     N+   T  ++       +    Y ST       E    
Sbjct: 173 DSAAMVNAFPYHELFGP-----NVAG-TAELIRIALTTKLKPFTYVSTADVGAAIEPSAF 226

Query: 209 TEETPQAPINP-----------YGKAKKMAEDIILDFSKNSDMAV 242
           TE+     I+P           YG +K   E ++ + +    + V
Sbjct: 227 TEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLCALPV 271

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2 Length = 372

 Score = 49.6 bits (119), Expect = 3e-07
 Identities = 47/168 (27%), Positives = 75/168 (44%), Gaps = 23/168 (13%)

Query: 74  LVTGGAGYIGSHAALRLLKDSYRV------TIVDNLSRGNIGAVKVLQELFPEP----GR 123
           L+TG  G  GS+ A  LL+  Y V          N  R        +  ++ +P     +
Sbjct: 5   LITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTER--------VDHIYQDPHTCNPK 56

Query: 124 LQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITS-NTLVVLES 182
               Y DL D   + +   E   D V +  A+++V  S   P +Y  ++ +  TL +LE+
Sbjct: 57  FHLHYGDLSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESP-EYTADVDAMGTLRLLEA 115

Query: 183 MARHGVD--TLIY-SSTCATYGEPEKMPITEETPQAPINPYGKAKKMA 227
           +   G++  T  Y +ST   YG  +++P  E TP  P +PY  AK  A
Sbjct: 116 IRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYA 163

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 3r14_A* Length = 221

 Score = 47.7 bits (113), Expect = 7e-07
 Identities = 21/161 (13%), Positives = 52/161 (32%), Gaps = 26/161 (16%)

Query: 72  HVLVTGGAGYIGSHAALRLLKDS-YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYAD 130
           ++ + G AG I       LL  +   +T+     R        +     +  R+  I   
Sbjct: 7   YITILGAAGQIAQXLTATLLTYTDMHITL---YGR---QLKTRIPPEIIDHERVTVIEGS 60

Query: 131 LGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDT 190
             +   + +  +    + V  F      G                   ++++++R  +  
Sbjct: 61  FQNPGXLEQAVT--NAEVV--FVGAMESGSDMAS--------------IVKALSRXNIRR 102

Query: 191 LIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDII 231
           +I  S     GE   + + + T       Y + ++ A +++
Sbjct: 103 VIGVSMAGLSGE-FPVALEKWTFDNLPISYVQGERQARNVL 142

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2 Length = 375

 Score = 48.4 bits (116), Expect = 7e-07
 Identities = 46/169 (27%), Positives = 76/169 (44%), Gaps = 24/169 (14%)

Query: 74  LVTGGAGYIGSHAALRLLKDSYRV------TIVDNLSRGNIGAVKVLQELFPEP-----G 122
           L+TG  G  GS+ A  LL+  Y V      +   N  R        ++ L+  P     G
Sbjct: 28  LITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGR--------IEHLYKNPQAHIEG 79

Query: 123 RLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITS-NTLVVLE 181
            ++  Y DL D+  + K  +E     + +  A ++V  S     +Y  ++    TL +L+
Sbjct: 80  NMKLHYGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLA-EYTADVDGVGTLRLLD 138

Query: 182 SMARHGV--DTLIY-SSTCATYGEPEKMPITEETPQAPINPYGKAKKMA 227
           ++   G+      Y +ST   YG+ +++P  E TP  P +PYG AK  A
Sbjct: 139 AVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYA 187

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii} Length = 273

 Score = 47.2 bits (113), Expect = 1e-06
 Identities = 41/164 (25%), Positives = 65/164 (39%), Gaps = 28/164 (17%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            L+TG +G +G     RLL + + V  V N S    G      +L            DL 
Sbjct: 3   TLITGASGQLG-IELSRLLSERHEVIKVYNSSEIQGG-----YKL------------DLT 44

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYH-NITSNTLVVLESMARHGVDTL 191
           D   +  F  +   D +++ AA+  V +  ++  K Y  N  +    ++ +        +
Sbjct: 45  DFPRLEDFIIKKRPDVIINAAAMTDVDKCEIEKEKAYKINAEA-VRHIVRAGKVIDS-YI 102

Query: 192 IYSSTCATY---GEPEKMPITEETPQAPINPYGKAKKMAEDIIL 232
           ++ ST   Y   GE  K    EE    PIN YG +K + E   L
Sbjct: 103 VHIST--DYVFDGE--KGNYKEEDIPNPINYYGLSKLLGETFAL 142

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* Length = 344

 Score = 46.1 bits (110), Expect = 3e-06
 Identities = 39/171 (22%), Positives = 71/171 (41%), Gaps = 27/171 (15%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           +L+TGG G  G    +R + D+     +   SR  +   + +   F +P R++F   D+ 
Sbjct: 24  ILITGGTGSFG-KCFVRKVLDTTNAKKIIVYSRDELKQSE-MAMEFNDP-RMRFFIGDVR 80

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYH-NI--TSNTLVVLESMARHGVD 189
           D + +N        D  +H AA+ +V  +  +PL+    NI   SN   V+ +  ++ + 
Sbjct: 81  DLERLNYALEG--VDICIHAAALKHVPIAEYNPLECIKTNIMGASN---VINACLKNAIS 135

Query: 190 TLIYSST-CATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSD 239
            +I  ST  A                 PIN YG  K  ++ + +  +    
Sbjct: 136 QVIALSTDKAAN---------------PINLYGATKLCSDKLFVSANNFKG 171

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} Length = 251

 Score = 45.0 bits (107), Expect = 8e-06
 Identities = 20/145 (13%), Positives = 39/145 (26%), Gaps = 30/145 (20%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           +LV GG+G +G+         S+    +D                   P           
Sbjct: 25  ILVLGGSGALGAEVVKFFKSKSWNTISID---------------FRENPNADHSFTIKDS 69

Query: 133 DAKAVNKFFSENA-----FDAVMHFAAVAYVGESTLD-PLKYYH-----NITSNTLV--- 178
             + +     +        D  +  A     G ++ D  LK        N+ S       
Sbjct: 70  GEEEIKSVIEKINSKSIKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHI 129

Query: 179 VLESMARHGVDTLIYSSTCATYGEP 203
             + + + G+  L   ++ A     
Sbjct: 130 GAKLLNQGGLFVLT-GASAALNRTS 153

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A* Length = 321

 Score = 44.1 bits (105), Expect = 2e-05
 Identities = 47/173 (27%), Positives = 73/173 (42%), Gaps = 47/173 (27%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           V + G  G +GS A  R L+    V +V          ++   EL            +L 
Sbjct: 6   VFIAGHRGMVGS-AIRRQLEQRGDVELV----------LRTRDEL------------NLL 42

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVG----ESTLDPLKY-YHN--ITSNTLVVLESMAR 185
           D++AV+ FF+    D V  + A A VG     +T  P  + Y N  I SN   ++ +  +
Sbjct: 43  DSRAVHDFFASERIDQV--YLAAAKVGGIVANNTY-PADFIYQNMMIESN---IIHAAHQ 96

Query: 186 HGVDTLIY-SSTCATYGEPEKMPITEET----PQAPIN-PYGKAK----KMAE 228
           + V+ L++  S+C  Y +  K P+ E         P N PY  AK    K+ E
Sbjct: 97  NDVNKLLFLGSSCI-YPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLCE 148

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} Length = 258

 Score = 42.9 bits (102), Expect = 3e-05
 Identities = 16/71 (22%), Positives = 31/71 (43%), Gaps = 1/71 (1%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            +VTGGA  IG   + +L  D + + + D L +    A + ++ +     +  F+  D+ 
Sbjct: 5   AMVTGGAQGIGRGISEKLAADGFDIAVAD-LPQQEEQAAETIKLIEAADQKAVFVGLDVT 63

Query: 133 DAKAVNKFFSE 143
           D    +    E
Sbjct: 64  DKANFDSAIDE 74

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A Length = 315

 Score = 43.0 bits (102), Expect = 4e-05
 Identities = 41/175 (23%), Positives = 65/175 (37%), Gaps = 37/175 (21%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           VLVTG  G +G  A  +  + +    +     R      +V                +L 
Sbjct: 5   VLVTGATGLLG-RAVHKEFQQNNWHAVGCGFRRARPKFEQV----------------NLL 47

Query: 133 DAKAVNKFFSENAFDAVMHFAA-----VAYVGESTLDPLKYYH-NITSNTLVVLESMARH 186
           D+ AV+    +     ++H AA     V    E+   P      N+ + +  + +  A  
Sbjct: 48  DSNAVHHIIHDFQPHVIVHCAAERRPDVV---EN--QPDAASQLNVDA-SGNLAKEAAAV 101

Query: 187 GVDTLIYSSTCATY---GEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNS 238
           G   LIY S+   Y   G     P  EE   AP+N YGK K   E  +L+ +  +
Sbjct: 102 GA-FLIYISS--DYVFDG--TNPPYREEDIPAPLNLYGKTKLDGEKAVLENNLGA 151

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} Length = 264

 Score = 42.9 bits (102), Expect = 4e-05
 Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 4/73 (5%)

Query: 72  HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPG-RLQFIYAD 130
           H L+T G   +G     +LL   Y VT+       +  A++ ++E + +   RLQF+ AD
Sbjct: 9   HALITAGTKGLGKQVTEKLLAKGYSVTVTY---HSDTTAMETMKETYKDVEERLQFVQAD 65

Query: 131 LGDAKAVNKFFSE 143
           +   + ++K   E
Sbjct: 66  VTKKEDLHKIVEE 78

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A* Length = 381

 Score = 43.1 bits (102), Expect = 4e-05
 Identities = 43/171 (25%), Positives = 73/171 (42%), Gaps = 27/171 (15%)

Query: 74  LVTGGAGYIGSHAALRLLKDSYRV------TIVDNLSRGNIGAVKVLQELFPEP-----G 122
           L+TG  G  GS+    LL   Y V      +   N  R        +  ++ +P      
Sbjct: 32  LITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQR--------INHIYIDPHNVNKA 83

Query: 123 RLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITS-NTLVVLE 181
            ++  YADL DA ++ ++      D V + AA ++V  S   P  Y  ++ +   L +LE
Sbjct: 84  LMKLHYADLTDASSLRRWIDVIKPDEVYNLAAQSHVAVSFEIPD-YTADVVATGALRLLE 142

Query: 182 SMARHGVDTL----IY-SSTCATYGEPEKMPITEETPQAPINPYGKAKKMA 227
           ++  H +D+      Y + +   +G     P +E TP  P +PY  +K  A
Sbjct: 143 AVRSHTIDSGRTVKYYQAGSSEMFGSTPP-PQSETTPFHPRSPYAASKCAA 192

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* Length = 253

 Score = 42.2 bits (99), Expect = 6e-05
 Identities = 31/174 (17%), Positives = 53/174 (30%), Gaps = 29/174 (16%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           VLVTG +G  G     +L + S +            G V+  Q      G       D+ 
Sbjct: 7   VLVTGASGRTGQIVYKKLKEGSDKFVAK--------GLVRSAQGKEKIGGEADVFIGDIT 58

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSN-------------TLVV 179
           DA ++N  F     DA++   +     +   DP K                         
Sbjct: 59  DADSINPAF--QGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQ 116

Query: 180 LESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILD 233
           +++    GV  ++   +    G     P+ +             K+ AE  + D
Sbjct: 117 IDAAKVAGVKHIVVVGSMG--GTNPDHPLNKLGNG----NILVWKRKAEQYLAD 164

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} Length = 256

 Score = 41.7 bits (99), Expect = 9e-05
 Identities = 19/71 (26%), Positives = 29/71 (40%), Gaps = 2/71 (2%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
             VTGG G IG+    RL KD +RV      +      VK L++             ++G
Sbjct: 16  AYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSP--RRVKWLEDQKALGFDFYASEGNVG 73

Query: 133 DAKAVNKFFSE 143
           D  +  + F +
Sbjct: 74  DWDSTKQAFDK 84

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A Length = 450

 Score = 41.8 bits (97), Expect = 1e-04
 Identities = 14/80 (17%), Positives = 30/80 (37%), Gaps = 10/80 (12%)

Query: 72  HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
            VL+  G+G++       L     +VT+           ++  ++L         I  D+
Sbjct: 5   SVLM-LGSGFVTRPTLDVLTDSGIKVTVACR-------TLESAKKLSAGVQHSTPISLDV 56

Query: 132 GDAKAVNKFFSENAFDAVMH 151
            D  A++   ++   D V+ 
Sbjct: 57  NDDAALDAEVAK--HDLVIS 74

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* Length = 346

 Score = 41.9 bits (98), Expect = 1e-04
 Identities = 30/176 (17%), Positives = 54/176 (30%), Gaps = 31/176 (17%)

Query: 56  TFSSPSPFSQHEEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQ 115
               PSP  +       VL+ G  G+IG   A   L       I+      +    K+ +
Sbjct: 3   VSPVPSPKGR-------VLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFK 55

Query: 116 ELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSN 175
            L  E      +Y  + + +A+ K   E+  D V+          ST+        I   
Sbjct: 56  AL--EDKGAIIVYGLINEQEAMEKILKEHEIDIVV----------STVGGESILDQIA-- 101

Query: 176 TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDII 231
              ++++M   G       S            +    P  P     + K+    ++
Sbjct: 102 ---LVKAMKAVGTIKRFLPSEF-------GHDVNRADPVEPGLNMYREKRRVRQLV 147

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} Length = 280

 Score = 41.4 bits (98), Expect = 1e-04
 Identities = 19/71 (26%), Positives = 26/71 (36%), Gaps = 2/71 (2%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            +VTGG   IG   A  L    + + I         G   V+ EL     R+ F+ ADL 
Sbjct: 32  AIVTGGRRGIGLGIARALAASGFDIAITGIGDAE--GVAPVIAELSGLGARVIFLRADLA 89

Query: 133 DAKAVNKFFSE 143
           D  +       
Sbjct: 90  DLSSHQATVDA 100

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} Length = 281

 Score = 41.4 bits (98), Expect = 1e-04
 Identities = 23/78 (29%), Positives = 31/78 (39%), Gaps = 5/78 (6%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            LVTGG   IG   A  L+     V IV        GAV+ L+ L    G +++   D+ 
Sbjct: 14  YLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDIT 73

Query: 133 DAKAVNKFFSENAFDAVM 150
           +           A DAV 
Sbjct: 74  NEDET-----ARAVDAVT 86

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* Length = 277

 Score = 41.5 bits (98), Expect = 1e-04
 Identities = 19/72 (26%), Positives = 25/72 (34%), Gaps = 3/72 (4%)

Query: 72  HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
             LVTG    IG   A RL K+  RV +     RG  G    L+EL            D+
Sbjct: 24  VALVTGATSGIGLEIARRLGKEGLRVFVCA---RGEEGLRTTLKELREAGVEADGRTCDV 80

Query: 132 GDAKAVNKFFSE 143
                +    + 
Sbjct: 81  RSVPEIEALVAA 92

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} Length = 279

 Score = 41.5 bits (98), Expect = 1e-04
 Identities = 12/72 (16%), Positives = 18/72 (25%), Gaps = 3/72 (4%)

Query: 72  HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
              VTG +  IG   A  L      V       R        +  L      +     D+
Sbjct: 26  TAFVTGVSSGIGLAVARTLAARGIAVYGCA---RDAKNVSAAVDGLRAAGHDVDGSSCDV 82

Query: 132 GDAKAVNKFFSE 143
                V+   + 
Sbjct: 83  TSTDEVHAAVAA 94

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} Length = 286

 Score = 41.4 bits (97), Expect = 1e-04
 Identities = 26/147 (17%), Positives = 44/147 (29%), Gaps = 29/147 (19%)

Query: 78  GAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAV 137
           G GY     +  L    +R+      SR N   ++ ++    EP         L     +
Sbjct: 12  GHGYTARVLSRALAPQGWRIIG---TSR-NPDQMEAIRASGAEPLLWPGEEPSLDGVTHL 67

Query: 138 NKFFSENAFDAVMHFAAVAYVGESTLDP-LKYYHNITSNTLVVLESMARHGVDTLIYSST 196
                      ++  A  +       DP L    +  +                + Y ST
Sbjct: 68  -----------LISTAPDSGG-----DPVLAALGDQIAARA--------AQFRWVGYLST 103

Query: 197 CATYGEPEKMPITEETPQAPINPYGKA 223
            A YG+ +   + E TP  P    G+ 
Sbjct: 104 TAVYGDHDGAWVDETTPLTPTAARGRW 130

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} Length = 262

 Score = 41.0 bits (97), Expect = 1e-04
 Identities = 14/71 (19%), Positives = 33/71 (46%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           +++ GG   +G+  A     +S  + +  + ++ +  A K+  EL  +  ++    +DL 
Sbjct: 14  IVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLS 73

Query: 133 DAKAVNKFFSE 143
           + + V K F  
Sbjct: 74  NEEEVAKLFDF 84

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2 Length = 292

 Score = 41.0 bits (97), Expect = 2e-04
 Identities = 43/171 (25%), Positives = 66/171 (38%), Gaps = 35/171 (20%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           +L+TG  G +G     +L   +  V   D            +Q+L            D+ 
Sbjct: 15  ILITGANGQLGREIQKQLKGKNVEVIPTD------------VQDL------------DIT 50

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYV--GESTLDPLKYYHNITSNTLVVLESMARHGVDT 190
           +  AVNKFF+E   + V++ AA   V   E   D L Y  N       +  +    G   
Sbjct: 51  NVLAVNKFFNEKKPNVVINCAAHTAVDKCEEQYD-LAYKINAIG-PKNLAAAAYSVGA-E 107

Query: 191 LIYSSTCATY---GEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNS 238
           ++  ST   Y   GE ++ PITE     P + YGK K   E+ +   +   
Sbjct: 108 IVQIST--DYVFDGEAKE-PITEFDEVNPQSAYGKTKLEGENFVKALNPKY 155

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} Length = 281

 Score = 40.7 bits (96), Expect = 2e-04
 Identities = 11/73 (15%), Positives = 21/73 (28%), Gaps = 3/73 (4%)

Query: 72  HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPG-RLQFIYAD 130
             ++TG    IG   A  L K    + +    +        V  E+       +    AD
Sbjct: 27  TAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPD--EIRTVTDEVAGLSSGTVLHHPAD 84

Query: 131 LGDAKAVNKFFSE 143
           +     +    + 
Sbjct: 85  MTKPSEIADMMAM 97

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} Length = 281

 Score = 40.7 bits (96), Expect = 2e-04
 Identities = 21/79 (26%), Positives = 28/79 (35%), Gaps = 9/79 (11%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPG-RLQFIYADL 131
            LVTGG   +G   A  L  + Y V I     R          E+    G  ++ +  D+
Sbjct: 36  ALVTGGGTGVGRGIAQALSAEGYSVVITG---RRPDVLDAAAGEIGGRTGNIVRAVVCDV 92

Query: 132 GDAKAVNKFFSENAFDAVM 150
           GD   V        F AV 
Sbjct: 93  GDPDQV-----AALFAAVR 106

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} Length = 269

 Score = 40.6 bits (96), Expect = 2e-04
 Identities = 14/71 (19%), Positives = 25/71 (35%), Gaps = 2/71 (2%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
             VTGG G +G+  + RL      V +  + S  N      L          +    D+ 
Sbjct: 28  AFVTGGMGGLGAAISRRLHDAGMAVAV--SHSERNDHVSTWLMHERDAGRDFKAYAVDVA 85

Query: 133 DAKAVNKFFSE 143
           D ++  +   +
Sbjct: 86  DFESCERCAEK 96

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* Length = 258

 Score = 40.2 bits (95), Expect = 2e-04
 Identities = 15/71 (21%), Positives = 28/71 (39%), Gaps = 2/71 (2%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           VL+TG +  IG   A    +   +V +    +       + +  +  + G   F  ADL 
Sbjct: 10  VLITGSSQGIGLATARLFARAGAKVGLHGRKAPA--NIDETIASMRADGGDAAFFAADLA 67

Query: 133 DAKAVNKFFSE 143
            ++A  +   E
Sbjct: 68  TSEACQQLVDE 78

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} PDB: 3sj7_A* Length = 246

 Score = 40.2 bits (95), Expect = 2e-04
 Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 2/71 (2%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            LVTG +  IG   AL+L ++ Y V +    S+    A  V++E+  +      I A++ 
Sbjct: 7   ALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKE--KAEAVVEEIKAKGVDSFAIQANVA 64

Query: 133 DAKAVNKFFSE 143
           DA  V     E
Sbjct: 65  DADEVKAMIKE 75

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 Length = 267

 Score = 40.3 bits (95), Expect = 3e-04
 Identities = 23/71 (32%), Positives = 31/71 (43%), Gaps = 1/71 (1%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            LVTG A  IG   A  LL    +V +VD      +     L E F EP +  FI  D+ 
Sbjct: 10  ALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQF-EPQKTLFIQCDVA 68

Query: 133 DAKAVNKFFSE 143
           D + +   F +
Sbjct: 69  DQQQLRDTFRK 79

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* Length = 318

 Score = 40.3 bits (94), Expect = 3e-04
 Identities = 17/79 (21%), Positives = 33/79 (41%), Gaps = 7/79 (8%)

Query: 71  THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYAD 130
           + +L+ GG GYIG+H     LK  +   +    +R N     +L E   +      +  +
Sbjct: 12  SKILIFGGTGYIGNHMVKGSLKLGHPTYV---FTRPNSSKTTLLDEF--QSLGAIIVKGE 66

Query: 131 LGDAKAVNKFFSENAFDAV 149
           L + + + +   +   D V
Sbjct: 67  LDEHEKLVELMKK--VDVV 83

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} Length = 287

 Score = 40.2 bits (95), Expect = 3e-04
 Identities = 38/171 (22%), Positives = 56/171 (32%), Gaps = 35/171 (20%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           V++TG  G +G      L  + Y +   D             + L            D+ 
Sbjct: 8   VIITGANGQLGKQLQEELNPEEYDIYPFD------------KKLL------------DIT 43

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYV--GESTLDPLKYYHNITSNTLVVLESMARHGVDT 190
           +   V +   E     ++H AA   V   E   D L Y  N       V  +    G   
Sbjct: 44  NISQVQQVVQEIRPHIIIHCAAYTKVDQAEKERD-LAYVINAIG-ARNVAVASQLVGA-K 100

Query: 191 LIYSSTCATY---GEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNS 238
           L+Y ST   Y   G+  +    E    APIN YG +K   E  + +     
Sbjct: 101 LVYIST--DYVFQGDRPE-GYDEFHNPAPINIYGASKYAGEQFVKELHNKY 148

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} Length = 257

 Score = 39.9 bits (94), Expect = 3e-04
 Identities = 14/78 (17%), Positives = 26/78 (33%), Gaps = 13/78 (16%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVD-NLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
            +VTG +  +G+     L ++   V  +D     G     +   EL      ++F  AD+
Sbjct: 10  FIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGE----EPAAEL---GAAVRFRNADV 62

Query: 132 GDAKAVNKFFSENAFDAV 149
            +           A    
Sbjct: 63  TNEADA-----TAALAFA 75

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} Length = 246

 Score = 39.8 bits (94), Expect = 3e-04
 Identities = 17/71 (23%), Positives = 29/71 (40%), Gaps = 2/71 (2%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            LVTG +  IG   A+ L K    V +    +     A +V+ E+         + AD+ 
Sbjct: 7   ALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQ--KANEVVDEIKKLGSDAIAVRADVA 64

Query: 133 DAKAVNKFFSE 143
           +A+ V     +
Sbjct: 65  NAEDVTNMVKQ 75

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* Length = 269

 Score = 39.9 bits (94), Expect = 3e-04
 Identities = 19/71 (26%), Positives = 28/71 (39%), Gaps = 2/71 (2%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            LVTG +  IG   AL L     +V +    S G   A +V+  +    G    + AD+ 
Sbjct: 31  ALVTGASRGIGRAIALELAAAGAKVAVNYASSAG--AADEVVAAIAAAGGEAFAVKADVS 88

Query: 133 DAKAVNKFFSE 143
               V   F+ 
Sbjct: 89  QESEVEALFAA 99

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G Length = 244

 Score = 39.8 bits (94), Expect = 3e-04
 Identities = 18/71 (25%), Positives = 29/71 (40%), Gaps = 2/71 (2%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           V+VTG +  IG   AL L K   +V +  N +R    A +V +++    G+      D+ 
Sbjct: 4   VVVTGASRGIGKAIALSLGKAGCKVLV--NYARSAKAAEEVSKQIEAYGGQAITFGGDVS 61

Query: 133 DAKAVNKFFSE 143
               V      
Sbjct: 62  KEADVEAMMKT 72

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* Length = 241

 Score = 39.6 bits (93), Expect = 3e-04
 Identities = 26/144 (18%), Positives = 46/144 (31%), Gaps = 24/144 (16%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           VLV GG G +GS         ++ V  +D +            E       ++   +   
Sbjct: 10  VLVYGGRGALGSRCVQAFRARNWWVASIDVVE----------NEEASASVIVKMTDSFTE 59

Query: 133 DAKAVNKFFSENA----FDAVMHFAAVAYVGESTLD-PLKYYH-----NITSNTLV---V 179
            A  V     +       DA++  A     G +      K        +I ++T+     
Sbjct: 60  QADQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLA 119

Query: 180 LESMARHGVDTLIYSSTCATYGEP 203
            + +   G+ TL   +  A  G P
Sbjct: 120 TKHLKEGGLLTLA-GAKAALDGTP 142

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} Length = 247

 Score = 39.8 bits (94), Expect = 4e-04
 Identities = 9/71 (12%), Positives = 22/71 (30%), Gaps = 2/71 (2%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            +VTG +  +G   A +L      + +  + +          +E       +     D+ 
Sbjct: 8   AIVTGSSRGLGKAIAWKLGNMGANIVLNGSPAST--SLDATAEEFKAAGINVVVAKGDVK 65

Query: 133 DAKAVNKFFSE 143
           + + V      
Sbjct: 66  NPEDVENMVKT 76

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 280

 Score = 39.9 bits (94), Expect = 4e-04
 Identities = 12/71 (16%), Positives = 29/71 (40%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           V++TG +  IG   A+   ++   VTI    S       +++ +      ++  + AD+ 
Sbjct: 9   VIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVT 68

Query: 133 DAKAVNKFFSE 143
                ++  + 
Sbjct: 69  TEDGQDQIINS 79

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} Length = 281

 Score = 39.6 bits (93), Expect = 5e-04
 Identities = 20/81 (24%), Positives = 31/81 (38%), Gaps = 13/81 (16%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVD-NLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
            +V+GGAG +G     RL  D   V I D    +G      +  EL     R +F+  ++
Sbjct: 33  AIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGK----ALADEL---GNRAEFVSTNV 85

Query: 132 GDAKAVNKFFSENAFDAVMHF 152
               +V       A +A    
Sbjct: 86  TSEDSV-----LAAIEAANQL 101

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 Length = 256

 Score = 39.4 bits (93), Expect = 5e-04
 Identities = 22/71 (30%), Positives = 29/71 (40%), Gaps = 3/71 (4%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            LVTG    IG   ALRL+KD + V I D  +     A  V  E+    G    +  D+ 
Sbjct: 5   ALVTGAGQGIGKAIALRLVKDGFAVAIAD-YNDA--TAKAVASEINQAGGHAVAVKVDVS 61

Query: 133 DAKAVNKFFSE 143
           D   V     +
Sbjct: 62  DRDQVFAAVEQ 72

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* Length = 260

 Score = 39.1 bits (92), Expect = 6e-04
 Identities = 16/73 (21%), Positives = 24/73 (32%), Gaps = 3/73 (4%)

Query: 72  HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPG-RLQFIYAD 130
             +VTG    IG   A  L      + +            KV   L  + G ++ +  AD
Sbjct: 6   VAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAA--EIEKVRAGLAAQHGVKVLYDGAD 63

Query: 131 LGDAKAVNKFFSE 143
           L   +AV      
Sbjct: 64  LSKGEAVRGLVDN 76

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} Length = 252

 Score = 39.2 bits (92), Expect = 7e-04
 Identities = 16/83 (19%), Positives = 27/83 (32%), Gaps = 8/83 (9%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           V V G   YIG+  A +   + + V       R       ++ E+    GR+     D  
Sbjct: 10  VAVIGAGDYIGAEIAKKFAAEGFTVFAGR---RNGEKLAPLVAEIEAAGGRIVARSLDAR 66

Query: 133 DAKAVNKFFSENAFDAVMHFAAV 155
           +   V         +A    A +
Sbjct: 67  NEDEV-----TAFLNAADAHAPL 84

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A Length = 255

 Score = 39.1 bits (92), Expect = 7e-04
 Identities = 16/72 (22%), Positives = 24/72 (33%), Gaps = 5/72 (6%)

Query: 72  HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
             LVTG    IG   A  L +    + +      G+      L E+     +     ADL
Sbjct: 6   TALVTGSTSGIGLGIAQVLARAGANIVLNG---FGD--PAPALAEIARHGVKAVHHPADL 60

Query: 132 GDAKAVNKFFSE 143
            D   +   F+ 
Sbjct: 61  SDVAQIEALFAL 72

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* Length = 258

 Score = 38.6 bits (91), Expect = 8e-04
 Identities = 17/71 (23%), Positives = 36/71 (50%), Gaps = 2/71 (2%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            LVTG +  +G  AA+RL ++ Y + I    S+    A++  +E+     ++  + A++G
Sbjct: 7   ALVTGSSRGVGKAAAIRLAENGYNIVINYARSKK--AALETAEEIEKLGVKVLVVKANVG 64

Query: 133 DAKAVNKFFSE 143
               + + F +
Sbjct: 65  QPAKIKEMFQQ 75

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* Length = 265

 Score = 38.8 bits (91), Expect = 8e-04
 Identities = 18/79 (22%), Positives = 28/79 (35%), Gaps = 13/79 (16%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVD-NLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
            ++TGGA  +G   A RL+       ++D   S G        ++L        F  AD+
Sbjct: 15  AVITGGASGLGLATAERLVGQGASAVLLDLPNSGGE----AQAKKL---GNNCVFAPADV 67

Query: 132 GDAKAVNKFFSENAFDAVM 150
              K V     + A     
Sbjct: 68  TSEKDV-----QTALALAK 81

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	248
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	99.97
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	99.97
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	99.97
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.97
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	99.97
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	99.97
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	99.96
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	99.96
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	99.96
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	99.96
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	99.96
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	99.96
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	99.96
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	99.96
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	99.96
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	99.96
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	99.96
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	99.96
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	99.96
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	99.96
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.96
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	99.96
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	99.96
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	99.96
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	99.96
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	99.96
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	99.96
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	99.96
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	99.96
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	99.96
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	99.96
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.96
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	99.96
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	99.96
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	99.96
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	99.96
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	99.96
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	99.96
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	99.96
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	99.96
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	99.96
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	99.96
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	99.96
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	99.96
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	99.96
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	99.96
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	99.96
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	99.96
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	99.96
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	99.96
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	99.96
3imf_A	257	Short chain dehydrogenase; structural genomics, in	99.96
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	99.95
3rih_A	293	Short chain dehydrogenase or reductase; structural	99.95
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.95
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	99.95
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	99.95
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	99.95
4dqx_A	277	Probable oxidoreductase protein; structural genomi	99.95
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	99.95
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	99.95
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	99.95
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	99.95
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	99.95
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	99.95
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	99.95
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	99.95
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	99.95
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	99.95
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	99.95
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	99.95
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	99.95
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	99.95
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	99.95
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	99.95
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	99.95
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	99.95
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	99.95
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	99.95
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	99.95
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	99.95
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	99.95
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	99.95
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	99.95
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	99.95
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	99.95
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	99.95
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	99.95
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	99.95
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	99.95
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	99.95
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	99.95
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	99.95
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	99.95
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	99.95
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	99.95
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	99.95
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	99.95
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	99.95
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	99.95
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.95
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	99.95
3cxt_A	291	Dehydrogenase with different specificities; rossma	99.95
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	99.95
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	99.95
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	99.95
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	99.95
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	99.95
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	99.95
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	99.95
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	99.95
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	99.95
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	99.95
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	99.95
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	99.95
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	99.95
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	99.95
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	99.95
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	99.95
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	99.95
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	99.95
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	99.95
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	99.95
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	99.95
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	99.95
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	99.95
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.95
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	99.95
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	99.95
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	99.95
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	99.95
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	99.95
1spx_A	278	Short-chain reductase family member (5L265); paral	99.95
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	99.95
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	99.95
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.95
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	99.95
1xkq_A	280	Short-chain reductase family member (5D234); parra	99.95
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	99.95
1xhl_A	297	Short-chain dehydrogenase/reductase family member	99.95
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	99.95
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	99.94
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	99.94
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	99.94
1xq1_A	266	Putative tropinone reducatse; structural genomics,	99.94
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	99.94
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	99.94
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	99.94
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	99.94
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	99.94
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	99.94
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.94
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	99.94
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	99.94
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	99.94
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	99.94
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.94
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	99.94
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	99.94
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	99.94
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	99.94
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	99.94
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	99.94
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	99.94
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	99.94
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	99.94
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.94
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	99.94
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	99.94
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	99.94
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.94
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	99.94
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	99.94
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	99.94
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	99.94
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	99.94
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	99.94
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	99.94
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	99.94
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	99.94
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	99.94
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	99.94
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	99.94
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	99.94
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	99.94
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	99.94
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	99.94
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	99.94
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	99.94
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	99.94
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	99.94
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	99.94
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	99.94
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	99.94
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.94
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	99.94
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	99.94
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	99.94
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	99.94
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	99.94
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	99.94
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	99.94
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	99.94
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	99.94
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	99.94
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	99.94
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	99.94
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	99.94
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	99.94
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	99.94
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.94
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	99.94
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	99.94
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.94
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	99.93
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	99.93
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	99.93
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	99.93
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	99.93
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	99.93
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	99.93
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	99.93
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	99.93
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	99.93
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	99.93
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.93
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	99.93
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	99.93
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	99.93
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	99.93
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	99.93
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	99.93
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	99.93
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	99.93
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	99.93
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	99.93
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	99.93
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	99.93
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	99.93
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	99.93
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	99.93
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	99.93
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	99.93
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	99.93
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	99.93
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	99.93
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	99.93
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	99.93
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	99.93
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	99.93
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	99.93
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.93
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	99.92
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	99.92
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	99.92
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	99.92
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	99.92
4e4y_A	244	Short chain dehydrogenase family protein; structur	99.92
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	99.92
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	99.92
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.92
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	99.92
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	99.91
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	99.91
4f6c_A	427	AUSA reductase domain protein; thioester reductase	99.91
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.91
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	99.91
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.91
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.91
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	99.91
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	99.91
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.91
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	99.91
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	99.91
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	99.9
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.9
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.9
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	99.9
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.9
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.9
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	99.9
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.9
4f6l_B	508	AUSA reductase domain protein; thioester reductase	99.89
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	99.89
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.89
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.89
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	99.88
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	99.88
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	99.88
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.88
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	99.87
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	99.86
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.86
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	99.86
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	99.86
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	99.85
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	99.85
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.85
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	99.85
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	99.85
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.83
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.82
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	99.82
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	99.82
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.81
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	99.81
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.81
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.8
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	99.8
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.8
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.79
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.78
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.74
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	99.72
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	99.69
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	99.58
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	99.21
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	99.21
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	98.98
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	98.96
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	98.93
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	98.91
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	98.84
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	98.8
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	98.74
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.72
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	98.71
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	98.53
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	98.5
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	98.5
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	98.46
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	98.37
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	98.35
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	98.34
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	98.25
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	98.24
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	98.22
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	98.22
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	98.22
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	98.22
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	98.21
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	98.16
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	98.12
1id1_A	153	Putative potassium channel protein; RCK domain, E.	98.1
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	98.06
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.05
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	98.01
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	98.01
3gms_A	340	Putative NADPH:quinone reductase; structural genom	98.01
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	98.01
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	98.0
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	97.99
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	97.97
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	97.96
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	97.96
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	97.91
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	97.91
4eye_A	342	Probable oxidoreductase; structural genomics, niai	97.91
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.86
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	97.85
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	97.84
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.81
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	97.8
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	97.77
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	97.76
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	97.74
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	97.72
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	97.71
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	97.7
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	97.7
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	97.68
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	97.68
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	97.65
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	97.63
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	97.58
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	97.57
1y6j_A	318	L-lactate dehydrogenase; southeast collaboratory f	97.57
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	97.56
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	97.55
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	97.55
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	97.52
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	97.51
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	97.51
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	97.5
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	97.5
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	97.49
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	97.44
3hhp_A	312	Malate dehydrogenase; MDH, citric acid cycle, TCA	97.44
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	97.41
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	97.4
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	97.37
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.36
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	97.35
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	97.35
3tl2_A	315	Malate dehydrogenase; center for structural genomi	97.33
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	97.32
3nep_X	314	Malate dehydrogenase; halophIle, molecular adpatat	97.31
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	97.31
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	97.3
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	97.28
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	97.27
3ldh_A	330	Lactate dehydrogenase; oxidoreductase, CHOH donor,	97.27
3d0o_A	317	L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly	97.25
2x0j_A	294	Malate dehydrogenase; oxidoreductase, hyperthermop	97.22
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	97.2
1ldn_A	316	L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA	97.2
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	97.16
4h7p_A	345	Malate dehydrogenase; ssgcid, structural G seattle	97.16
1t2d_A	322	LDH-P, L-lactate dehydrogenase; ternary complex, o	97.15
1ez4_A	318	Lactate dehydrogenase; rossmann fold, oxidoreducta	97.14
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	97.13
2xxj_A	310	L-LDH, L-lactate dehydrogenase; oxidoreductase, hy	97.12
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	97.11
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	97.11
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	97.11
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	97.06
1a5z_A	319	L-lactate dehydrogenase; oxidoreductase, glycolysi	97.04
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	97.02
2zqz_A	326	L-LDH, L-lactate dehydrogenase; oxidoreductase, ro	97.01
2hjr_A	328	Malate dehydrogenase; malaria, structural genomics	96.95
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	96.93
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	96.91
4g65_A	461	TRK system potassium uptake protein TRKA; structur	96.91
1guz_A	310	Malate dehydrogenase; oxidoreductase, tricarboxyli	96.9
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	96.89
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	96.89
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	96.89
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	96.87
2i6t_A	303	Ubiquitin-conjugating enzyme E2-like isoform A; L-	96.86
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	96.85
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	96.85
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	96.84
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	96.84
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	96.83
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	96.83
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	96.83
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	96.82
7mdh_A	375	Protein (malate dehydrogenase); chloroplastic mala	96.8
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	96.8
1lld_A	319	L-lactate dehydrogenase; oxidoreductase(CHOH (D)-N	96.8
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	96.78
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	96.77
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	96.76
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	96.76
2ewd_A	317	Lactate dehydrogenase,; protein-substrate_cofactor	96.76
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	96.75
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	96.72
2nqt_A	352	N-acetyl-gamma-glutamyl-phosphate reductase; apopr	96.71
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	96.68
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	96.67
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	96.66
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	96.64
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	96.6
1hyh_A	309	L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2	96.6
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	96.59
3rui_A	340	Ubiquitin-like modifier-activating enzyme ATG7; au	96.58
2d4a_B	308	Malate dehydrogenase; archaea, hyperthermophIle, o	96.58
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	96.57
1lnq_A	336	MTHK channels, potassium channel related protein;	96.57
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	96.53
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	96.49
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	96.47
2ozp_A	345	N-acetyl-gamma-glutamyl-phosphate reductase; amino	96.47
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	96.47
1kjq_A	391	GART 2, phosphoribosylglycinamide formyltransferas	96.46
3h5n_A	353	MCCB protein; ubiquitin-activating enzyme, microci	96.44
3ax6_A	380	Phosphoribosylaminoimidazole carboxylase, ATPase;	96.44
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	96.43
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	96.4
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	96.4
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	96.39
3dr3_A	337	N-acetyl-gamma-glutamyl-phosphate reductase; csgid	96.38
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	96.38
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	96.36
1dih_A	273	Dihydrodipicolinate reductase; oxidoreductase; HET	96.36
3orq_A	377	N5-carboxyaminoimidazole ribonucleotide synthetas;	96.32
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	96.32
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	96.32
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	96.28
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	96.26
2dwc_A	433	PH0318, 433AA long hypothetical phosphoribosylglyc	96.17
4gsl_A	615	Ubiquitin-like modifier-activating enzyme ATG7; ub	96.16
3vh1_A	598	Ubiquitin-like modifier-activating enzyme ATG7; au	96.13
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	96.1
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	96.1
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	96.05
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	95.93
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	95.91
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	95.88
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	95.85
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	95.84
2ph5_A	480	Homospermidine synthase; alpha-beta protein, struc	95.83
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	95.83
2w70_A	449	Biotin carboxylase; ligase, ATP-binding, fatty aci	95.82
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	95.78
3q2o_A	389	Phosphoribosylaminoimidazole carboxylase, ATPase;	95.77
2pv7_A	298	T-protein [includes: chorismate mutase (EC 5.4.99	95.66
2vpq_A	451	Acetyl-COA carboxylase; bacteria, ATP-grAsp domain	95.62
4ffl_A	363	PYLC; amino acid, biosynthesis of pyrrolysine, iso	95.6
4dim_A	403	Phosphoribosylglycinamide synthetase; structural g	95.59

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.97  E-value=7.6e-31  Score=225.05  Aligned_cols=176  Identities=38%  Similarity=0.636  Sum_probs=152.5

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li  150 (248)
                      |+||||||+||||++++++|+++|++|++++|.........+.+....  +.++.++.+|++|.+++.+++++.++|+||
T Consensus         6 ~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vi   83 (341)
T 3enk_A            6 GTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKIT--GKTPAFHETDVSDERALARIFDAHPITAAI   83 (341)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHH--SCCCEEECCCTTCHHHHHHHHHHSCCCEEE
T ss_pred             cEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhc--CCCceEEEeecCCHHHHHHHHhccCCcEEE
Confidence            799999999999999999999999999999987655544443333322  346889999999999999999877899999


Q ss_pred             EcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCCChHHHHHHHHHHH
Q 025786          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDI  230 (248)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e~l  230 (248)
                      ||||..........+.+.++.|+.++.++++.|++.+.++||++||.++||.....+++|+.+..|.++|+.||.++|++
T Consensus        84 h~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~  163 (341)
T 3enk_A           84 HFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAVKRIVFSSSATVYGVPERSPIDETFPLSATNPYGQTKLMAEQI  163 (341)
T ss_dssp             ECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGBCSCSSSSBCTTSCCBCSSHHHHHHHHHHHH
T ss_pred             ECccccccCccccChHHHHHHHHHHHHHHHHHHHhCCCCEEEEEecceEecCCCCCCCCCCCCCCCCChhHHHHHHHHHH
Confidence            99997654334455667889999999999999999888899999999999988888899999999999999999999999


Q ss_pred             HHHHhhcCC-CcEEEEecC
Q 025786          231 ILDFSKNSD-MAVLQCHRF  248 (248)
Q Consensus       231 ~~~~~~~~g-i~~~~v~Pf  248 (248)
                      ++.++.+++ ++++++||+
T Consensus       164 ~~~~~~~~~~~~~~~lRp~  182 (341)
T 3enk_A          164 LRDVEAADPSWRVATLRYF  182 (341)
T ss_dssp             HHHHHHHCTTCEEEEEEEC
T ss_pred             HHHHhhcCCCceEEEEeec
Confidence            999999886 999999985

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=99.97  E-value=9.3e-31  Score=215.59  Aligned_cols=166  Identities=17%  Similarity=0.173  Sum_probs=132.8

Q ss_pred             CCCceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc---
Q 025786           67 EEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE---  143 (248)
Q Consensus        67 ~~~~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~---  143 (248)
                      +++ |+++||||++|||+++|+.|+++|++|++++|+..   .+.+..+++...+.++.++++|++|++++++++++   
T Consensus         5 L~g-KvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~---~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~   80 (254)
T 4fn4_A            5 LKN-KVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLED---RLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFE   80 (254)
T ss_dssp             GTT-CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHH---HHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCC-CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHH---HHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            345 99999999999999999999999999999996543   33444444433456899999999999999998876   


Q ss_pred             --CCCCEEEEccccccc-CCCCCCchhhHhhhH----HH----HHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCC
Q 025786          144 --NAFDAVMHFAAVAYV-GESTLDPLKYYHNIT----SN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEET  212 (248)
Q Consensus       144 --~~iD~li~~Ag~~~~-~~~~~~~~~~~~~~~----~~----~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~  212 (248)
                        +++|+||||||+... .+..+.+++.|+..+    .+    ++.++|.|++++.++||++||.+.+           .
T Consensus        81 ~~G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~-----------~  149 (254)
T 4fn4_A           81 TYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGI-----------R  149 (254)
T ss_dssp             HHSCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT-----------C
T ss_pred             HcCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhc-----------C
Confidence              799999999997643 344445555555433    33    5568999999888999999998775           2


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          213 PQAPINPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       213 ~~~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      +.+...+|++||++...|++.++.|   +||+|++|.|
T Consensus       150 ~~~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~P  187 (254)
T 4fn4_A          150 GGFAGAPYTVAKHGLIGLTRSIAAHYGDQGIRAVAVLP  187 (254)
T ss_dssp             SSSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE
T ss_pred             CCCCChHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEe
Confidence            3445678999999999999999988   5899999998

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=99.97  E-value=4.5e-30  Score=211.65  Aligned_cols=165  Identities=17%  Similarity=0.162  Sum_probs=132.5

Q ss_pred             CCceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc----
Q 025786           68 EGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----  143 (248)
Q Consensus        68 ~~~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~----  143 (248)
                      .+ |+++||||++|||+++++.|+++|++|++++|+.   +.+.+..+++...+.++.++++|++|++++++++++    
T Consensus         8 ~g-KvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~---~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~   83 (255)
T 4g81_D            8 TG-KTALVTGSARGLGFAYAEGLAAAGARVILNDIRA---TLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAE   83 (255)
T ss_dssp             TT-CEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCH---HHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHT
T ss_pred             CC-CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCH---HHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH
Confidence            44 9999999999999999999999999999998643   334444444444456899999999999999988876    


Q ss_pred             -CCCCEEEEcccccccCCCCCCchhhHhhhHH----H----HHHHHHHHHHc-CCCEEEEeccceecCCCCCCCCCCCCC
Q 025786          144 -NAFDAVMHFAAVAYVGESTLDPLKYYHNITS----N----TLVVLESMARH-GVDTLIYSSTCATYGEPEKMPITEETP  213 (248)
Q Consensus       144 -~~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~----~----~~~ll~~~~~~-~~~~iV~~SS~~~~g~~~~~~~~e~~~  213 (248)
                       +++|+||||||+....+..+.+.+.|+..+.    +    ++.++|.|.++ +.++||++||.+.+.           +
T Consensus        84 ~G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~-----------~  152 (255)
T 4g81_D           84 GIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQA-----------A  152 (255)
T ss_dssp             TCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTS-----------B
T ss_pred             CCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcC-----------C
Confidence             7899999999987766666656666654443    3    45578888654 568999999987762           3


Q ss_pred             CCCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          214 QAPINPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       214 ~~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      .+...+|++||++...|++.++.|   +||+|++|.|
T Consensus       153 ~~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~P  189 (255)
T 4g81_D          153 RPTVAPYTAAKGGIKMLTCSMAAEWAQFNIQTNAIGP  189 (255)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEee
Confidence            444678999999999999999988   6899999998

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.97  E-value=1.5e-29  Score=210.55  Aligned_cols=161  Identities=20%  Similarity=0.264  Sum_probs=141.6

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~l  149 (248)
                      ||+||||||+||||++++++|+++|++|++++|+..+..            ..++.++.+|++|.+++.++++  ++|+|
T Consensus         3 ~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~------------~~~~~~~~~Dl~d~~~~~~~~~--~~D~v   68 (267)
T 3rft_A            3 MKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA------------GPNEECVQCDLADANAVNAMVA--GCDGI   68 (267)
T ss_dssp             EEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC------------CTTEEEEECCTTCHHHHHHHHT--TCSEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc------------CCCCEEEEcCCCCHHHHHHHHc--CCCEE
Confidence            489999999999999999999999999999997643321            3478899999999999999998  79999


Q ss_pred             EEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCC-CCCCCCCCCCCCCCCChHHHHHHHHH
Q 025786          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGE-PEKMPITEETPQAPINPYGKAKKMAE  228 (248)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~-~~~~~~~e~~~~~~~~~Y~~sK~a~e  228 (248)
                      |||||..    .....+..++.|+.++.++++++++.+.++||++||..+|+. ....+++|+.+..+.+.|+.||.++|
T Consensus        69 i~~Ag~~----~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~g~~~~~~~~~e~~~~~~~~~Y~~sK~~~e  144 (267)
T 3rft_A           69 VHLGGIS----VEKPFEQILQGNIIGLYNLYEAARAHGQPRIVFASSNHTIGYYPQTERLGPDVPARPDGLYGVSKCFGE  144 (267)
T ss_dssp             EECCSCC----SCCCHHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGTTSBTTSCBCTTSCCCCCSHHHHHHHHHH
T ss_pred             EECCCCc----CcCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcchHHhCCCCCCCCCCCCCCCCCCChHHHHHHHHH
Confidence            9999974    234556788899999999999999988899999999999974 34567889999999999999999999


Q ss_pred             HHHHHHhhcCCCcEEEEecC
Q 025786          229 DIILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       229 ~l~~~~~~~~gi~~~~v~Pf  248 (248)
                      .+++.++.++|++++++||.
T Consensus       145 ~~~~~~a~~~g~~~~~vr~~  164 (267)
T 3rft_A          145 NLARMYFDKFGQETALVRIG  164 (267)
T ss_dssp             HHHHHHHHHHCCCEEEEEEC
T ss_pred             HHHHHHHHHhCCeEEEEEee
Confidence            99999999999999999984

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=99.97  E-value=1.1e-29  Score=218.76  Aligned_cols=177  Identities=27%  Similarity=0.399  Sum_probs=150.0

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCC--CCceEEEEccCCCHHHHHHHhhcCCCC
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPE--PGRLQFIYADLGDAKAVNKFFSENAFD  147 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~iD  147 (248)
                      +|+||||||||+||++++++|+++|++|++++|...........+......  ..++.++.+|++|.+++.++++  ++|
T Consensus        25 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d  102 (351)
T 3ruf_A           25 PKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMK--GVD  102 (351)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTT--TCS
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhc--CCC
Confidence            389999999999999999999999999999998665443333322221110  0478999999999999999998  799


Q ss_pred             EEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCCChHHHHHHHH
Q 025786          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMA  227 (248)
Q Consensus       148 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~  227 (248)
                      +|||+||.........++...+..|+.++.++++++.+.+.++||++||.++||.....+++|+.+..|.+.|+.||.++
T Consensus       103 ~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~  182 (351)
T 3ruf_A          103 HVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAASSSTYGDHPALPKVEENIGNPLSPYAVTKYVN  182 (351)
T ss_dssp             EEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHHHHH
T ss_pred             EEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEecHHhcCCCCCCCCccCCCCCCCChhHHHHHHH
Confidence            99999997543333445667888999999999999999988899999999999988888899999999999999999999


Q ss_pred             HHHHHHHhhcCCCcEEEEecC
Q 025786          228 EDIILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       228 e~l~~~~~~~~gi~~~~v~Pf  248 (248)
                      |.+++.++.++|++++++||+
T Consensus       183 E~~~~~~~~~~g~~~~ilRp~  203 (351)
T 3ruf_A          183 EIYAQVYARTYGFKTIGLRYF  203 (351)
T ss_dssp             HHHHHHHHHHHCCCCEEEEEC
T ss_pred             HHHHHHHHHHhCCCEEEEeeC
Confidence            999999999999999999995

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=99.97  E-value=1e-29  Score=207.91  Aligned_cols=163  Identities=15%  Similarity=0.220  Sum_probs=131.2

Q ss_pred             CCceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCC
Q 025786           68 EGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFD  147 (248)
Q Consensus        68 ~~~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD  147 (248)
                      .+ |++|||||++|||+++++.|+++|++|++++|+.  .++..+.+++   .+.++.++++|++|+++++++++.+++|
T Consensus         8 ~G-KvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~--~~~~~~~~~~---~g~~~~~~~~Dv~d~~~v~~~~~~g~iD   81 (247)
T 4hp8_A            8 EG-RKALVTGANTGLGQAIAVGLAAAGAEVVCAARRA--PDETLDIIAK---DGGNASALLIDFADPLAAKDSFTDAGFD   81 (247)
T ss_dssp             TT-CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSC--CHHHHHHHHH---TTCCEEEEECCTTSTTTTTTSSTTTCCC
T ss_pred             CC-CEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCc--HHHHHHHHHH---hCCcEEEEEccCCCHHHHHHHHHhCCCC
Confidence            45 9999999999999999999999999999999743  2333333333   3568999999999999999999889999


Q ss_pred             EEEEcccccccCCCCCCchhhHhhhHH----H----HHHHHHHHHHcC-CCEEEEeccceecCCCCCCCCCCCCCCCCCC
Q 025786          148 AVMHFAAVAYVGESTLDPLKYYHNITS----N----TLVVLESMARHG-VDTLIYSSTCATYGEPEKMPITEETPQAPIN  218 (248)
Q Consensus       148 ~li~~Ag~~~~~~~~~~~~~~~~~~~~----~----~~~ll~~~~~~~-~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~  218 (248)
                      +||||||+....+..+.+++.|+..+.    +    ++.+++.|.+++ .++||++||...+           .+.+...
T Consensus        82 iLVNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~-----------~g~~~~~  150 (247)
T 4hp8_A           82 ILVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSF-----------QGGIRVP  150 (247)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGT-----------SCCSSCH
T ss_pred             EEEECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhC-----------CCCCCCh
Confidence            999999987766665656666654433    3    445788887765 6899999998775           2334467


Q ss_pred             hHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          219 PYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       219 ~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      +|++||++...|++.++.|   +||+|++|.|
T Consensus       151 ~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~P  182 (247)
T 4hp8_A          151 SYTAAKHGVAGLTKLLANEWAAKGINVNAIAP  182 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCeEEEEEee
Confidence            8999999999999999988   5899999998

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=99.96  E-value=4e-29  Score=213.40  Aligned_cols=170  Identities=39%  Similarity=0.617  Sum_probs=144.8

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~l  149 (248)
                      ||+||||||+||||++++++|+++|++|++++|......      +.+   ..++.++.+|++|.+++.+++++.++|+|
T Consensus         1 M~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~------~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~d~v   71 (330)
T 2c20_A            1 MNSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHE------DAI---TEGAKFYNGDLRDKAFLRDVFTQENIEAV   71 (330)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCG------GGS---CTTSEEEECCTTCHHHHHHHHHHSCEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCch------hhc---CCCcEEEECCCCCHHHHHHHHhhcCCCEE
Confidence            589999999999999999999999999999987543321      111   12678899999999999999986679999


Q ss_pred             EEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCCChHHHHHHHHHH
Q 025786          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAED  229 (248)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e~  229 (248)
                      ||+||.........+++..++.|+.++.++++++.+.+.++||++||.++|+.....+++|+.+..|.++|+.||.++|+
T Consensus        72 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~  151 (330)
T 2c20_A           72 MHFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIFSSTAATYGEVDVDLITEETMTNPTNTYGETKLAIEK  151 (330)
T ss_dssp             EECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGGCSCSSSSBCTTSCCCCSSHHHHHHHHHHH
T ss_pred             EECCcccCccccccCHHHHHHHHhHHHHHHHHHHHHcCCCEEEEeCCceeeCCCCCCCCCcCCCCCCCChHHHHHHHHHH
Confidence            99999754322233556778889999999999999888889999999999987777789999998899999999999999


Q ss_pred             HHHHHhhcCCCcEEEEecC
Q 025786          230 IILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       230 l~~~~~~~~gi~~~~v~Pf  248 (248)
                      +++.++.++|++++++||+
T Consensus       152 ~~~~~~~~~~~~~~ilrp~  170 (330)
T 2c20_A          152 MLHWYSQASNLRYKIFRYF  170 (330)
T ss_dssp             HHHHHHHTSSCEEEEEECS
T ss_pred             HHHHHHHHhCCcEEEEecC
Confidence            9999999999999999984

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=99.96  E-value=5.6e-29  Score=213.29  Aligned_cols=176  Identities=36%  Similarity=0.633  Sum_probs=142.8

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li  150 (248)
                      |+||||||+||||++++++|+++|++|++++|..+......+.++...  +.++.++.+|++|.+++.+++++.++|+||
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~D~vi   78 (338)
T 1udb_A            1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLG--GKHPTFVEGDIRNEALMTEILHDHAIDTVI   78 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHH--TSCCEEEECCTTCHHHHHHHHHHTTCSEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhc--CCcceEEEccCCCHHHHHHHhhccCCCEEE
Confidence            479999999999999999999999999999875443322222222221  235788999999999999998765799999


Q ss_pred             EcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCC-CChHHHHHHHHHH
Q 025786          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP-INPYGKAKKMAED  229 (248)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~-~~~Y~~sK~a~e~  229 (248)
                      ||||..........+.+.++.|+.++.+++++|++.+.++||++||.++||.....+++|+.+..+ .++|+.||.++|+
T Consensus        79 h~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~~~Y~~sK~~~e~  158 (338)
T 1udb_A           79 HFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDNPKIPYVESFPTGTPQSPYGKSKLMVEQ  158 (338)
T ss_dssp             ECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSSHHHHHHHHHHH
T ss_pred             ECCccCccccchhcHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccHHHhCCCCCCCcCcccCCCCCCChHHHHHHHHHH
Confidence            999975332222345667889999999999999988888999999999998776677888877654 8899999999999


Q ss_pred             HHHHHhhcC-CCcEEEEecC
Q 025786          230 IILDFSKNS-DMAVLQCHRF  248 (248)
Q Consensus       230 l~~~~~~~~-gi~~~~v~Pf  248 (248)
                      +++.++.++ +++++++|||
T Consensus       159 ~~~~~~~~~~~~~~~ilR~~  178 (338)
T 1udb_A          159 ILTDLQKAQPDWSIALLRYF  178 (338)
T ss_dssp             HHHHHHHHSTTCEEEEEEEC
T ss_pred             HHHHHHHhcCCCceEEEeec
Confidence            999999887 8999999985

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=99.96  E-value=5.9e-29  Score=213.77  Aligned_cols=177  Identities=26%  Similarity=0.423  Sum_probs=143.3

Q ss_pred             CceEEEEecCCchhHHHHHHHHHHCC--CEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCC
Q 025786           69 GVTHVLVTGGAGYIGSHAALRLLKDS--YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAF  146 (248)
Q Consensus        69 ~~k~vlITGasg~IG~~la~~L~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~i  146 (248)
                      .+|+|||||||||||++++++|+++|  ++|++++|......  .+.++... ...++.++.+|++|.+++.++++..++
T Consensus        23 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~--~~~l~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~~~   99 (346)
T 4egb_A           23 NAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGN--LNNVKSIQ-DHPNYYFVKGEIQNGELLEHVIKERDV   99 (346)
T ss_dssp             -CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCC--GGGGTTTT-TCTTEEEEECCTTCHHHHHHHHHHHTC
T ss_pred             CCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccc--hhhhhhhc-cCCCeEEEEcCCCCHHHHHHHHhhcCC
Confidence            34899999999999999999999999  77888776532211  12222221 235789999999999999999986569


Q ss_pred             CEEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCC-CCCCCCCCCCCCCCChHHHHHH
Q 025786          147 DAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEP-EKMPITEETPQAPINPYGKAKK  225 (248)
Q Consensus       147 D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~-~~~~~~e~~~~~~~~~Y~~sK~  225 (248)
                      |+|||+||..........+...++.|+.++.++++++.+.+.++||++||.++|+.. ...+++|+.+..|.+.|+.||.
T Consensus       100 d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vy~~~~~~~~~~E~~~~~p~~~Y~~sK~  179 (346)
T 4egb_A          100 QVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPHIKLVQVSTDEVYGSLGKTGRFTEETPLAPNSPYSSSKA  179 (346)
T ss_dssp             CEEEECCCCC---------CHHHHHHTHHHHHHHHHHHHSTTSEEEEEEEGGGGCCCCSSCCBCTTSCCCCCSHHHHHHH
T ss_pred             CEEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCchHHhCCCCcCCCcCCCCCCCCCChhHHHHH
Confidence            999999998755545566778889999999999999999988999999999999876 4568999999999999999999


Q ss_pred             HHHHHHHHHhhcCCCcEEEEecC
Q 025786          226 MAEDIILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       226 a~e~l~~~~~~~~gi~~~~v~Pf  248 (248)
                      ++|.+++.++.++|++++++||+
T Consensus       180 ~~E~~~~~~~~~~g~~~~ilRp~  202 (346)
T 4egb_A          180 SADMIALAYYKTYQLPVIVTRCS  202 (346)
T ss_dssp             HHHHHHHHHHHHHCCCEEEEEEC
T ss_pred             HHHHHHHHHHHHhCCCEEEEeec
Confidence            99999999999999999999985

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=99.96  E-value=1.4e-28  Score=203.41  Aligned_cols=163  Identities=13%  Similarity=0.125  Sum_probs=126.6

Q ss_pred             CCCceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc---
Q 025786           67 EEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE---  143 (248)
Q Consensus        67 ~~~~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~---  143 (248)
                      +++ |++|||||++|||+++++.|+++|++|++++|+....+. .+.+.+   .+.++.++++|++|++++++++++   
T Consensus         5 L~g-KvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~-~~~~~~---~~~~~~~~~~Dv~~~~~v~~~v~~~~~   79 (258)
T 4gkb_A            5 LQD-KVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAF-LDALAQ---RQPRATYLPVELQDDAQCRDAVAQTIA   79 (258)
T ss_dssp             CTT-CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHH-HHHHHH---HCTTCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCC-CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHH-HHHHHh---cCCCEEEEEeecCCHHHHHHHHHHHHH
Confidence            455 999999999999999999999999999999986544222 222222   246789999999999999888876   


Q ss_pred             --CCCCEEEEcccccccCCCCCCchhhHhh----hHHH----HHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCC
Q 025786          144 --NAFDAVMHFAAVAYVGESTLDPLKYYHN----ITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETP  213 (248)
Q Consensus       144 --~~iD~li~~Ag~~~~~~~~~~~~~~~~~----~~~~----~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~  213 (248)
                        +++|+||||||+...... +.+.+.|+.    |+.+    ++.++|.|++.+ ++||++||...+.           +
T Consensus        80 ~~G~iDiLVNnAGi~~~~~~-~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-G~IVnisS~~~~~-----------~  146 (258)
T 4gkb_A           80 TFGRLDGLVNNAGVNDGIGL-DAGRDAFVASLERNLIHYYAMAHYCVPHLKATR-GAIVNISSKTAVT-----------G  146 (258)
T ss_dssp             HHSCCCEEEECCCCCCCCCT-TSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTHHHH-----------C
T ss_pred             HhCCCCEEEECCCCCCCCCc-cCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CeEEEEeehhhcc-----------C
Confidence              799999999998654333 333444443    3333    455788887665 7999999987762           3


Q ss_pred             CCCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          214 QAPINPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       214 ~~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      .+...+|++||++.+.|++.++.|   +||++++|.|
T Consensus       147 ~~~~~~Y~asKaav~~ltr~lA~ela~~gIrVN~V~P  183 (258)
T 4gkb_A          147 QGNTSGYCASKGAQLALTREWAVALREHGVRVNAVIP  183 (258)
T ss_dssp             CSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEE
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHHhcccCeEEEEEec
Confidence            344678999999999999999988   6899999998

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=99.96  E-value=5.4e-29  Score=211.82  Aligned_cols=167  Identities=25%  Similarity=0.342  Sum_probs=142.8

Q ss_pred             CceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 025786           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (248)
Q Consensus        69 ~~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~  148 (248)
                      ++++||||||+||||++++++|+++|++|++++|.... +.       +     ++.++.+|++|.+++.++++..++|+
T Consensus        11 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~-------l-----~~~~~~~Dl~d~~~~~~~~~~~~~d~   77 (321)
T 2pk3_A           11 GSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL-------P-----NVEMISLDIMDSQRVKKVISDIKPDY   77 (321)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC-------T-----TEEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred             CcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc-------c-----eeeEEECCCCCHHHHHHHHHhcCCCE
Confidence            35899999999999999999999999999999975432 11       1     57889999999999999998666999


Q ss_pred             EEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHc-CCCEEEEeccceecCCC--CCCCCCCCCCCCCCChHHHHHH
Q 025786          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARH-GVDTLIYSSTCATYGEP--EKMPITEETPQAPINPYGKAKK  225 (248)
Q Consensus       149 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~-~~~~iV~~SS~~~~g~~--~~~~~~e~~~~~~~~~Y~~sK~  225 (248)
                      ||||||.........++...++.|+.++.++++++.+. +.++||++||.++|+..  ...+++|+.+..+.++|+.||.
T Consensus        78 vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~E~~~~~~~~~Y~~sK~  157 (321)
T 2pk3_A           78 IFHLAAKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILTIGSSEEYGMILPEESPVSEENQLRPMSPYGVSKA  157 (321)
T ss_dssp             EEECCSCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEEGGGTBSCCGGGCSBCTTSCCBCCSHHHHHHH
T ss_pred             EEEcCcccchhhhhhcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEccHHhcCCCCCCCCCCCCCCCCCCCCccHHHHH
Confidence            99999975433234466778889999999999999765 57899999999999876  5678899999899999999999


Q ss_pred             HHHHHHHHHhhcCCCcEEEEecC
Q 025786          226 MAEDIILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       226 a~e~l~~~~~~~~gi~~~~v~Pf  248 (248)
                      ++|.+++.++.++|++++++||+
T Consensus       158 ~~E~~~~~~~~~~gi~~~ilrp~  180 (321)
T 2pk3_A          158 SVGMLARQYVKAYGMDIIHTRTF  180 (321)
T ss_dssp             HHHHHHHHHHHHHCCEEEEEEEC
T ss_pred             HHHHHHHHHHHHcCCCEEEEEeC
Confidence            99999999999899999999995

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=99.96  E-value=9.5e-29  Score=212.58  Aligned_cols=162  Identities=25%  Similarity=0.374  Sum_probs=140.2

Q ss_pred             CCceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCC
Q 025786           68 EGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFD  147 (248)
Q Consensus        68 ~~~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD  147 (248)
                      ..+|+|||||||||||++++++|+++|++|++++|....               .++.++.+|++|.+++.++++  ++|
T Consensus        17 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~---------------~~~~~~~~Dl~d~~~~~~~~~--~~d   79 (347)
T 4id9_A           17 RGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG---------------TGGEEVVGSLEDGQALSDAIM--GVS   79 (347)
T ss_dssp             ----CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS---------------SCCSEEESCTTCHHHHHHHHT--TCS
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC---------------CCccEEecCcCCHHHHHHHHh--CCC
Confidence            334899999999999999999999999999999875422               357789999999999999998  799


Q ss_pred             EEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCC--CCCCCCCCCCCCCCCChHHHHHH
Q 025786          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGE--PEKMPITEETPQAPINPYGKAKK  225 (248)
Q Consensus       148 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~--~~~~~~~e~~~~~~~~~Y~~sK~  225 (248)
                      +|||+|+......  ...+..++.|+.++.++++++.+.+.++||++||..+||.  ....+++|+.+..|.+.|+.||.
T Consensus        80 ~vih~A~~~~~~~--~~~~~~~~~nv~~~~~ll~a~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~~~Y~~sK~  157 (347)
T 4id9_A           80 AVLHLGAFMSWAP--ADRDRMFAVNVEGTRRLLDAASAAGVRRFVFASSGEVYPENRPEFLPVTEDHPLCPNSPYGLTKL  157 (347)
T ss_dssp             EEEECCCCCCSSG--GGHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGTTTTSCSSSSBCTTSCCCCCSHHHHHHH
T ss_pred             EEEECCcccCcch--hhHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHHhCCCCCCCCCcCCCCCCCCCChHHHHHH
Confidence            9999999754322  2236778899999999999999988899999999999987  56678999999999999999999


Q ss_pred             HHHHHHHHHhhcCCCcEEEEecC
Q 025786          226 MAEDIILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       226 a~e~l~~~~~~~~gi~~~~v~Pf  248 (248)
                      ++|.+++.++.+++++++++||+
T Consensus       158 ~~E~~~~~~~~~~~~~~~ilRp~  180 (347)
T 4id9_A          158 LGEELVRFHQRSGAMETVILRFS  180 (347)
T ss_dssp             HHHHHHHHHHHHSSSEEEEEEEC
T ss_pred             HHHHHHHHHHHhcCCceEEEccc
Confidence            99999999999999999999995

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=99.96  E-value=1.1e-28  Score=212.06  Aligned_cols=176  Identities=38%  Similarity=0.655  Sum_probs=144.4

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCC------cchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRG------NIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSEN  144 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~------~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~  144 (248)
                      |+||||||+||||++++++|+++|++|++++|..+.      ..+..+.+....  +.++.++.+|++|.+++.+++++.
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~D~~~~~~~~~~~~~~   80 (348)
T 1ek6_A            3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELT--GRSVEFEEMDILDQGALQRLFKKY   80 (348)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHH--TCCCEEEECCTTCHHHHHHHHHHC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhcc--CCceEEEECCCCCHHHHHHHHHhc
Confidence            789999999999999999999999999999876443      222222222211  246888999999999999998765


Q ss_pred             CCCEEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCC-CChHHHH
Q 025786          145 AFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP-INPYGKA  223 (248)
Q Consensus       145 ~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~-~~~Y~~s  223 (248)
                      ++|+||||||.........++++.++.|+.++.++++++++.+.++||++||.++||.....+++|+.+..| .++|+.|
T Consensus        81 ~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~E~~~~~p~~~~Y~~s  160 (348)
T 1ek6_A           81 SFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKS  160 (348)
T ss_dssp             CEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSSHHHHH
T ss_pred             CCCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhCCCCCCCcCCCCCCCCCCCchHHH
Confidence            799999999975432223455678889999999999999988888999999999998777778899988777 8899999


Q ss_pred             HHHHHHHHHHHhhc-CCCcEEEEecC
Q 025786          224 KKMAEDIILDFSKN-SDMAVLQCHRF  248 (248)
Q Consensus       224 K~a~e~l~~~~~~~-~gi~~~~v~Pf  248 (248)
                      |.++|.+++.++.+ .+++++++||+
T Consensus       161 K~~~e~~~~~~~~~~~~~~~~~lR~~  186 (348)
T 1ek6_A          161 KFFIEEMIRDLCQADKTWNAVLLRYF  186 (348)
T ss_dssp             HHHHHHHHHHHHHHCTTCEEEEEEEC
T ss_pred             HHHHHHHHHHHHhcCCCcceEEEeec
Confidence            99999999999987 23999999985

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=99.96  E-value=7.2e-29  Score=210.22  Aligned_cols=165  Identities=33%  Similarity=0.499  Sum_probs=143.4

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li  150 (248)
                      |+|||||||||||++++++|+++|++|++++|.........         ...+.++.+|++|.+ +.++++  . |+||
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---------~~~~~~~~~Dl~d~~-~~~~~~--~-d~vi   67 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFV---------NPSAELHVRDLKDYS-WGAGIK--G-DVVF   67 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGGS---------CTTSEEECCCTTSTT-TTTTCC--C-SEEE
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhhc---------CCCceEEECccccHH-HHhhcC--C-CEEE
Confidence            57999999999999999999999999999987654332111         246888999999988 777776  3 9999


Q ss_pred             EcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCCChHHHHHHHHHHH
Q 025786          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDI  230 (248)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e~l  230 (248)
                      ||||.........++...++.|+.++.++++++.+.+.++||++||.++||.....+++|+.+..|.+.|+.||.++|.+
T Consensus        68 h~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~  147 (312)
T 3ko8_A           68 HFAANPEVRLSTTEPIVHFNENVVATFNVLEWARQTGVRTVVFASSSTVYGDADVIPTPEEEPYKPISVYGAAKAAGEVM  147 (312)
T ss_dssp             ECCSSCSSSGGGSCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHH
T ss_pred             ECCCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCcHHHhCCCCCCCCCCCCCCCCCChHHHHHHHHHHH
Confidence            99997554445566778889999999999999999888899999999999988888899999999999999999999999


Q ss_pred             HHHHhhcCCCcEEEEecC
Q 025786          231 ILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       231 ~~~~~~~~gi~~~~v~Pf  248 (248)
                      ++.++.++|++++++||+
T Consensus       148 ~~~~~~~~g~~~~~lrp~  165 (312)
T 3ko8_A          148 CATYARLFGVRCLAVRYA  165 (312)
T ss_dssp             HHHHHHHHCCEEEEEEEC
T ss_pred             HHHHHHHhCCCEEEEeec
Confidence            999999999999999995

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=99.96  E-value=1.3e-28  Score=208.95  Aligned_cols=166  Identities=31%  Similarity=0.513  Sum_probs=139.8

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~l  149 (248)
                      ||+||||||+||||++++++|+++|+ |+++++.......      ..   ...+.++.+|++| +++.++++  ++|+|
T Consensus         1 M~~vlVTGatG~iG~~l~~~L~~~g~-~v~~~~~~~~~~~------~~---~~~~~~~~~Dl~~-~~~~~~~~--~~d~v   67 (313)
T 3ehe_A            1 MSLIVVTGGAGFIGSHVVDKLSESNE-IVVIDNLSSGNEE------FV---NEAARLVKADLAA-DDIKDYLK--GAEEV   67 (313)
T ss_dssp             --CEEEETTTSHHHHHHHHHHTTTSC-EEEECCCSSCCGG------GS---CTTEEEECCCTTT-SCCHHHHT--TCSEE
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCCC-EEEEEcCCCCChh------hc---CCCcEEEECcCCh-HHHHHHhc--CCCEE
Confidence            58999999999999999999999994 5555432222111      01   2468889999999 89998887  79999


Q ss_pred             EEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCCChHHHHHHHHHH
Q 025786          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAED  229 (248)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e~  229 (248)
                      ||+|+.........++...++.|+.++.++++++.+.+.++||++||.++||.....+++|+.+..|.+.|+.||.++|.
T Consensus        68 ih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~  147 (313)
T 3ehe_A           68 WHIAANPDVRIGAENPDEIYRNNVLATYRLLEAMRKAGVSRIVFTSTSTVYGEAKVIPTPEDYPTHPISLYGASKLACEA  147 (313)
T ss_dssp             EECCCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEECCGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHH
T ss_pred             EECCCCCChhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCchHHhCcCCCCCCCCCCCCCCCCHHHHHHHHHHH
Confidence            99999755444556778889999999999999999988889999999999998888889999999999999999999999


Q ss_pred             HHHHHhhcCCCcEEEEecC
Q 025786          230 IILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       230 l~~~~~~~~gi~~~~v~Pf  248 (248)
                      +++.++.++|++++++||+
T Consensus       148 ~~~~~~~~~g~~~~ilRp~  166 (313)
T 3ehe_A          148 LIESYCHTFDMQAWIYRFA  166 (313)
T ss_dssp             HHHHHHHHTTCEEEEEECS
T ss_pred             HHHHHHHhcCCCEEEEeec
Confidence            9999999999999999995

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=99.96  E-value=8.4e-29  Score=213.51  Aligned_cols=177  Identities=27%  Similarity=0.379  Sum_probs=145.4

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCC--CCceEEEEccCCCHHHHHHHhhcCCCC
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPE--PGRLQFIYADLGDAKAVNKFFSENAFD  147 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~iD  147 (248)
                      ||+|||||||||||++++++|+++|++|++++|.........+.+.+....  ..++.++.+|++|.+++.++++  ++|
T Consensus        27 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d  104 (352)
T 1sb8_A           27 PKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACA--GVD  104 (352)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHT--TCS
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhc--CCC
Confidence            489999999999999999999999999999998654322111111111110  1468899999999999999997  799


Q ss_pred             EEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCCChHHHHHHHH
Q 025786          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMA  227 (248)
Q Consensus       148 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~  227 (248)
                      +||||||.........++...++.|+.++.++++++.+.+.++||++||.++|+.....+++|+.+..|.++|+.||.++
T Consensus       105 ~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~  184 (352)
T 1sb8_A          105 YVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVN  184 (352)
T ss_dssp             EEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHHHHH
T ss_pred             EEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhcCCCCCCCCCCCCCCCCCChhHHHHHHH
Confidence            99999996532222235567788899999999999999888899999999999887777889999989999999999999


Q ss_pred             HHHHHHHhhcCCCcEEEEecC
Q 025786          228 EDIILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       228 e~l~~~~~~~~gi~~~~v~Pf  248 (248)
                      |.+++.++.++|++++++||.
T Consensus       185 e~~~~~~~~~~g~~~~ilRp~  205 (352)
T 1sb8_A          185 ELYADVFSRCYGFSTIGLRYF  205 (352)
T ss_dssp             HHHHHHHHHHHCCCCEEEEEC
T ss_pred             HHHHHHHHHHcCCCEEEEEEC
Confidence            999999998899999999994

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=99.96  E-value=2.7e-28  Score=199.01  Aligned_cols=156  Identities=17%  Similarity=0.218  Sum_probs=123.8

Q ss_pred             CCceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-CCC
Q 025786           68 EGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-NAF  146 (248)
Q Consensus        68 ~~~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-~~i  146 (248)
                      .| |++|||||++|||+++++.|+++|++|++++|+....+.         ....++..+++|++|++++++++++ +++
T Consensus        10 ~G-K~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~---------~~~~~~~~~~~Dv~~~~~v~~~~~~~g~i   79 (242)
T 4b79_A           10 AG-QQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHA---------PRHPRIRREELDITDSQRLQRLFEALPRL   79 (242)
T ss_dssp             TT-CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTS---------CCCTTEEEEECCTTCHHHHHHHHHHCSCC
T ss_pred             CC-CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhh---------hhcCCeEEEEecCCCHHHHHHHHHhcCCC
Confidence            45 999999999999999999999999999999975433221         1245788999999999999999987 789


Q ss_pred             CEEEEcccccccCCCCCCchhhHh----hhHHH----HHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCCC
Q 025786          147 DAVMHFAAVAYVGESTLDPLKYYH----NITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPIN  218 (248)
Q Consensus       147 D~li~~Ag~~~~~~~~~~~~~~~~----~~~~~----~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~  218 (248)
                      |+||||||+..+  ..+.+.+.|+    .|+.+    ++.++|.|++++ ++||++||...+           .+.+...
T Consensus        80 DiLVNNAGi~~~--~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~-G~IVnisS~~~~-----------~~~~~~~  145 (242)
T 4b79_A           80 DVLVNNAGISRD--REEYDLATFERVLRLNLSAAMLASQLARPLLAQRG-GSILNIASMYST-----------FGSADRP  145 (242)
T ss_dssp             SEEEECCCCCCG--GGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHC-EEEEEECCGGGT-----------SCCSSCH
T ss_pred             CEEEECCCCCCC--cccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEeecccc-----------CCCCCCH
Confidence            999999998643  2233334444    34333    445788787655 799999998775           2344467


Q ss_pred             hHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          219 PYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       219 ~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      +|++||++...|++.++.|   +||+|++|.|
T Consensus       146 ~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~P  177 (242)
T 4b79_A          146 AYSASKGAIVQLTRSLACEYAAERIRVNAIAP  177 (242)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEe
Confidence            8999999999999999988   5899999998

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=99.96  E-value=1.1e-28  Score=215.88  Aligned_cols=178  Identities=36%  Similarity=0.546  Sum_probs=145.1

Q ss_pred             eEEEEecCCchhHHHHHHHHH-HCCCEEEEEecCCCCc---------chhhhhhhhhcCC--CCc---eEEEEccCCCHH
Q 025786           71 THVLVTGGAGYIGSHAALRLL-KDSYRVTIVDNLSRGN---------IGAVKVLQELFPE--PGR---LQFIYADLGDAK  135 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~-~~G~~V~~~~r~~~~~---------~~~~~~~~~~~~~--~~~---~~~~~~Dl~~~~  135 (248)
                      |+||||||+||||++++++|+ ++|++|++++|.....         +...+.++++...  ..+   +.++.+|++|.+
T Consensus         3 m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~   82 (397)
T 1gy8_A            3 MRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNED   82 (397)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCHH
Confidence            689999999999999999999 9999999999765432         1111112222111  124   889999999999


Q ss_pred             HHHHHhhcC-CCCEEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCC-------CCC
Q 025786          136 AVNKFFSEN-AFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPE-------KMP  207 (248)
Q Consensus       136 ~~~~~~~~~-~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~-------~~~  207 (248)
                      ++.+++++. ++|+||||||.........+++..++.|+.++.++++++.+.+.++||++||.++|+...       ..+
T Consensus        83 ~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~~  162 (397)
T 1gy8_A           83 FLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNAEP  162 (397)
T ss_dssp             HHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSCCC-----CCCC
T ss_pred             HHHHHHHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHhCCCEEEEECCHHHhCCCCcccccccccC
Confidence            999998764 499999999975432223456678889999999999999988888999999999998665       567


Q ss_pred             CCCCCCCCCCChHHHHHHHHHHHHHHHhhcCCCcEEEEecC
Q 025786          208 ITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       208 ~~e~~~~~~~~~Y~~sK~a~e~l~~~~~~~~gi~~~~v~Pf  248 (248)
                      ++|+.+..|.+.|+.||.++|++++.++.++|++++++||+
T Consensus       163 ~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilRp~  203 (397)
T 1gy8_A          163 IDINAKKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYF  203 (397)
T ss_dssp             BCTTSCCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEEC
T ss_pred             cCccCCCCCCCchHHHHHHHHHHHHHHHHHHCCcEEEEecc
Confidence            89999888899999999999999999999899999999995

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=99.96  E-value=2.7e-28  Score=204.40  Aligned_cols=168  Identities=15%  Similarity=0.101  Sum_probs=129.7

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCC---------cchhhhhhhhhcCCCCceEEEEccCCCHHHHHHH
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRG---------NIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKF  140 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~---------~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~  140 (248)
                      +|++|||||+||||++++++|+++|++|++++|+...         .+.+.+..+.+...+.++.++++|++|.++++++
T Consensus        10 ~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~   89 (281)
T 3s55_A           10 GKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAALESF   89 (281)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHH
Confidence            3999999999999999999999999999999985322         2222333333323356789999999999999988


Q ss_pred             hhc-----CCCCEEEEcccccccCCCCCCchhh----HhhhHHHHHH----HHHHHHHcCCCEEEEeccceecCCCCCCC
Q 025786          141 FSE-----NAFDAVMHFAAVAYVGESTLDPLKY----YHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMP  207 (248)
Q Consensus       141 ~~~-----~~iD~li~~Ag~~~~~~~~~~~~~~----~~~~~~~~~~----ll~~~~~~~~~~iV~~SS~~~~g~~~~~~  207 (248)
                      +++     +++|+||||||+.......+.+.+.    ++.|+.++..    +++.|++++.++||++||..++.      
T Consensus        90 ~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~------  163 (281)
T 3s55_A           90 VAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHS------  163 (281)
T ss_dssp             HHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGS------
T ss_pred             HHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhcC------
Confidence            875     6899999999987654444434333    4455555444    56667777778999999988762      


Q ss_pred             CCCCCCCCCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          208 ITEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       208 ~~e~~~~~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                           +.++...|+.||++.+.+++.++.+   +|+++++|+|.
T Consensus       164 -----~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG  202 (281)
T 3s55_A          164 -----ANFAQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPG  202 (281)
T ss_dssp             -----CCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEC
T ss_pred             -----CCCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecC
Confidence                 3445779999999999999999997   48999999994

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=99.96  E-value=1.8e-28  Score=212.60  Aligned_cols=179  Identities=25%  Similarity=0.285  Sum_probs=142.5

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCc--chhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCC
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGN--IGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFD  147 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD  147 (248)
                      ||+||||||+||||++++++|+++|++|++++|.....  +...+..........++.++.+|++|.+++.++++..++|
T Consensus         1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d   80 (372)
T 1db3_A            1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPD   80 (372)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCS
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhcCCC
Confidence            58999999999999999999999999999998754321  1111110100001246888999999999999998765689


Q ss_pred             EEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCC---CEEEEeccceecCCCCCCCCCCCCCCCCCChHHHHH
Q 025786          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV---DTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAK  224 (248)
Q Consensus       148 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~---~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK  224 (248)
                      +||||||........+++...++.|+.++.++++++.+.+.   ++||++||.++||.....+++|+.+..|.++|+.||
T Consensus        81 ~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~SS~~v~g~~~~~~~~E~~~~~~~~~Y~~sK  160 (372)
T 1db3_A           81 EVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAK  160 (372)
T ss_dssp             EEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTTSCCCCCSHHHHHH
T ss_pred             EEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCChhhhCCCCCCCCCccCCCCCCChHHHHH
Confidence            99999997654444456667788899999999999998876   799999999999877767889999988999999999


Q ss_pred             HHHHHHHHHHhhcCCCcEEEEecC
Q 025786          225 KMAEDIILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       225 ~a~e~l~~~~~~~~gi~~~~v~Pf  248 (248)
                      .++|.+++.++.+++++++++|||
T Consensus       161 ~~~e~~~~~~~~~~~~~~~~~r~~  184 (372)
T 1db3_A          161 LYAYWITVNYRESYGMYACNGILF  184 (372)
T ss_dssp             HHHHHHHHHHHHHHCCCEEEEEEC
T ss_pred             HHHHHHHHHHHHHhCCCeEEEEEC
Confidence            999999999999999999999886

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=99.96  E-value=3.3e-28  Score=199.60  Aligned_cols=158  Identities=17%  Similarity=0.219  Sum_probs=125.6

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      |+||||||++|||+++|+.|+++|++|++++|+.   +.+.+    ......++.++++|++|++++++++++     ++
T Consensus         3 K~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~---~~~~~----~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~   75 (247)
T 3ged_A            3 RGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDE---KRSAD----FAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQR   75 (247)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH---HHHHH----HHTTCTTEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCH---HHHHH----HHHhcCCEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            8999999999999999999999999999999642   22222    222345788999999999999998876     79


Q ss_pred             CCEEEEcccccccCCCCCCchhhHhhh----HHH----HHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYVGESTLDPLKYYHNI----TSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (248)
Q Consensus       146 iD~li~~Ag~~~~~~~~~~~~~~~~~~----~~~----~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (248)
                      +|+||||||+....+..+.+.+.|+..    +.+    ++.++|.|++++ ++||++||...+           .+.+..
T Consensus        76 iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~-G~IInisS~~~~-----------~~~~~~  143 (247)
T 3ged_A           76 IDVLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNK-GRIINIASTRAF-----------QSEPDS  143 (247)
T ss_dssp             CCEEEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGT-----------SCCTTC
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CcEEEEeecccc-----------cCCCCC
Confidence            999999999876665555555555543    333    445778887765 799999998776           234446


Q ss_pred             ChHHHHHHHHHHHHHHHhhcC--CCcEEEEec
Q 025786          218 NPYGKAKKMAEDIILDFSKNS--DMAVLQCHR  247 (248)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~~~~~--gi~~~~v~P  247 (248)
                      .+|++||++...|++.++.|+  ||+|++|.|
T Consensus       144 ~~Y~asKaal~~ltk~lA~ela~~IrVN~I~P  175 (247)
T 3ged_A          144 EAYASAKGGIVALTHALAMSLGPDVLVNCIAP  175 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEE
T ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEec
Confidence            789999999999999999884  799999998

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=99.96  E-value=8e-29  Score=206.00  Aligned_cols=162  Identities=16%  Similarity=0.172  Sum_probs=128.2

Q ss_pred             CCCCceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc--
Q 025786           66 HEEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE--  143 (248)
Q Consensus        66 ~~~~~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--  143 (248)
                      ++.+ |++|||||++|||+++|+.|+++|++|++++|+   .+.+.+..+++   +.++.++++|++|++++++++++  
T Consensus        26 rL~g-KvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~---~~~l~~~~~~~---g~~~~~~~~Dv~~~~~v~~~~~~~~   98 (273)
T 4fgs_A           26 RLNA-KIAVITGATSGIGLAAAKRFVAEGARVFITGRR---KDVLDAAIAEI---GGGAVGIQADSANLAELDRLYEKVK   98 (273)
T ss_dssp             TTTT-CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHH---CTTCEEEECCTTCHHHHHHHHHHHH
T ss_pred             hhCC-CEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECC---HHHHHHHHHHc---CCCeEEEEecCCCHHHHHHHHHHHH
Confidence            3455 999999999999999999999999999999964   34455555555   45788899999999999998876  


Q ss_pred             ---CCCCEEEEcccccccCCCCCCchhhHhhhH----HHHH----HHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCC
Q 025786          144 ---NAFDAVMHFAAVAYVGESTLDPLKYYHNIT----SNTL----VVLESMARHGVDTLIYSSTCATYGEPEKMPITEET  212 (248)
Q Consensus       144 ---~~iD~li~~Ag~~~~~~~~~~~~~~~~~~~----~~~~----~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~  212 (248)
                         +++|+||||||.....+..+.+++.|+..+    .++.    .++|.|++  .++||++||...+           .
T Consensus        99 ~~~G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~--~G~IInisS~~~~-----------~  165 (273)
T 4fgs_A           99 AEAGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLAR--GSSVVLTGSTAGS-----------T  165 (273)
T ss_dssp             HHHSCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE--EEEEEEECCGGGG-----------S
T ss_pred             HHcCCCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhh--CCeEEEEeehhhc-----------c
Confidence               799999999998776666666666665444    3333    34555533  3689999998775           2


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          213 PQAPINPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       213 ~~~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      +.+...+|++||+++..|++.++.|   +||+|++|.|
T Consensus       166 ~~~~~~~Y~asKaav~~ltr~lA~Ela~~gIrVN~V~P  203 (273)
T 4fgs_A          166 GTPAFSVYAASKAALRSFARNWILDLKDRGIRINTLSP  203 (273)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEEEE
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHHhcccCeEEEEEee
Confidence            3445678999999999999999988   5799999998

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=99.96  E-value=1.3e-28  Score=211.31  Aligned_cols=176  Identities=26%  Similarity=0.414  Sum_probs=140.9

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~l  149 (248)
                      ||+||||||+||||++++++|+++|++|++++|..+....  ...+.+.. .+++.++.+|++|.+++.++++..++|+|
T Consensus         1 M~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~~~l~~-~~~~~~~~~Dl~d~~~~~~~~~~~~~d~v   77 (347)
T 1orr_A            1 MAKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGAT--DNLHWLSS-LGNFEFVHGDIRNKNDVTRLITKYMPDSC   77 (347)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHH--HHHHHHHT-TCCCEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred             CcEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCch--hhhhhhcc-CCceEEEEcCCCCHHHHHHHHhccCCCEE
Confidence            5799999999999999999999999999999975433211  11122211 23688999999999999999985569999


Q ss_pred             EEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCC-EEEEeccceecCCCCCC----------------CCCCCC
Q 025786          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD-TLIYSSTCATYGEPEKM----------------PITEET  212 (248)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~-~iV~~SS~~~~g~~~~~----------------~~~e~~  212 (248)
                      |||||.........++...++.|+.++.++++++.+.+.+ +||++||.++|+.....                +++|+.
T Consensus        78 ih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~e~~  157 (347)
T 1orr_A           78 FHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDEST  157 (347)
T ss_dssp             EECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTS
T ss_pred             EECCcccChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEeccHHHhCCCCcCCcccccccccccccccCccccC
Confidence            9999975322222355677889999999999999988764 99999999999865432                256677


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHhhcCCCcEEEEecC
Q 025786          213 PQAPINPYGKAKKMAEDIILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       213 ~~~~~~~Y~~sK~a~e~l~~~~~~~~gi~~~~v~Pf  248 (248)
                      +..+.+.|+.||.++|.+++.++.++|++++++||.
T Consensus       158 ~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~  193 (347)
T 1orr_A          158 QLDFHSPYGCSKGAADQYMLDYARIFGLNTVVFRHS  193 (347)
T ss_dssp             CCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEC
T ss_pred             CCCCCCchHHHHHHHHHHHHHHHHHhCCcEEEEccC
Confidence            777889999999999999999999899999999995

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.96  E-value=2.3e-28  Score=209.15  Aligned_cols=176  Identities=25%  Similarity=0.264  Sum_probs=146.3

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~l  149 (248)
                      +++||||||+||||++++++|+++|++|++++|.......  ..++.+. ...++.++.+|++|.+++.++++..++|+|
T Consensus        14 ~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~V   90 (335)
T 1rpn_A           14 TRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTR--WRLRELG-IEGDIQYEDGDMADACSVQRAVIKAQPQEV   90 (335)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCC--HHHHHTT-CGGGEEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred             CCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccc--cchhhcc-ccCceEEEECCCCCHHHHHHHHHHcCCCEE
Confidence            3899999999999999999999999999999986543211  1112221 134688999999999999999876568999


Q ss_pred             EEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCC-CEEEEeccceecCCCCCCCCCCCCCCCCCChHHHHHHHHH
Q 025786          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV-DTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAE  228 (248)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~-~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e  228 (248)
                      |||||.........++...++.|+.++.++++++.+.+. ++||++||.++|+.....+++|+.+..|.+.|+.||.++|
T Consensus        91 ih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~~~e  170 (335)
T 1rpn_A           91 YNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDENTPFYPRSPYGVAKLYGH  170 (335)
T ss_dssp             EECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHH
T ss_pred             EECccccchhhhhhChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCHHHhCCCCCCCCCcccCCCCCChhHHHHHHHH
Confidence            999997543223445677888999999999999998875 8999999999998877778899999999999999999999


Q ss_pred             HHHHHHhhcCCCcEEEEecC
Q 025786          229 DIILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       229 ~l~~~~~~~~gi~~~~v~Pf  248 (248)
                      .+++.++.+++++++++||+
T Consensus       171 ~~~~~~~~~~~~~~~i~r~~  190 (335)
T 1rpn_A          171 WITVNYRESFGLHASSGILF  190 (335)
T ss_dssp             HHHHHHHHHHCCCEEEEEEC
T ss_pred             HHHHHHHHHcCCcEEEEeeC
Confidence            99999999899999999985

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=99.96  E-value=6.9e-28  Score=204.42  Aligned_cols=160  Identities=19%  Similarity=0.298  Sum_probs=141.3

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~l  149 (248)
                      +|+||||||||+||++++++|+++|++|++++|.....    + +       .++.++.+|++ .+++.++++  ++|+|
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~----~-~-------~~~~~~~~Dl~-~~~~~~~~~--~~d~V   66 (311)
T 3m2p_A            2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNK----A-I-------NDYEYRVSDYT-LEDLINQLN--DVDAV   66 (311)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC-----------------CCEEEECCCC-HHHHHHHTT--TCSEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCcc----c-C-------CceEEEEcccc-HHHHHHhhc--CCCEE
Confidence            47999999999999999999999999999999862111    1 1       16788999999 999999998  79999


Q ss_pred             EEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCCChHHHHHHHHHH
Q 025786          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAED  229 (248)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e~  229 (248)
                      ||+||.....    ++...++.|+.++.++++++.+.+.++||++||..+|+.....+++|+.+..|.+.|+.||.++|+
T Consensus        67 ih~a~~~~~~----~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~  142 (311)
T 3m2p_A           67 VHLAATRGSQ----GKISEFHDNEILTQNLYDACYENNISNIVYASTISAYSDETSLPWNEKELPLPDLMYGVSKLACEH  142 (311)
T ss_dssp             EECCCCCCSS----SCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCCGGGCSBCTTSCCCCSSHHHHHHHHHHH
T ss_pred             EEccccCCCC----ChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCCCCCCCCCCCCCCCchhHHHHHHHHH
Confidence            9999976433    566788899999999999999999899999999999998877889999999999999999999999


Q ss_pred             HHHHHhhcCCCcEEEEecC
Q 025786          230 IILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       230 l~~~~~~~~gi~~~~v~Pf  248 (248)
                      +++.++.+.|++++++||.
T Consensus       143 ~~~~~~~~~g~~~~ilRp~  161 (311)
T 3m2p_A          143 IGNIYSRKKGLCIKNLRFA  161 (311)
T ss_dssp             HHHHHHHHSCCEEEEEEEC
T ss_pred             HHHHHHHHcCCCEEEEeeC
Confidence            9999999999999999984

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=99.96  E-value=2.2e-28  Score=204.99  Aligned_cols=169  Identities=20%  Similarity=0.208  Sum_probs=128.1

Q ss_pred             CCceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc----
Q 025786           68 EGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----  143 (248)
Q Consensus        68 ~~~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~----  143 (248)
                      .+ |++|||||+||||++++++|+++|++|++++|+....++..+.+++......++.++++|++|++++++++++    
T Consensus        10 ~~-k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   88 (281)
T 3svt_A           10 QD-RTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTAW   88 (281)
T ss_dssp             TT-CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CC-CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHH
Confidence            44 9999999999999999999999999999999754433333333333322233789999999999999988876    


Q ss_pred             -CCCCEEEEcccccc-cCCCCCCc----hhhHhhhHHHHHH----HHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCC
Q 025786          144 -NAFDAVMHFAAVAY-VGESTLDP----LKYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETP  213 (248)
Q Consensus       144 -~~iD~li~~Ag~~~-~~~~~~~~----~~~~~~~~~~~~~----ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~  213 (248)
                       +++|+||||||... ..+..+.+    +..++.|+.++.+    +++.|.+++.++||++||...+.           +
T Consensus        89 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~  157 (281)
T 3svt_A           89 HGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASN-----------T  157 (281)
T ss_dssp             HSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHS-----------C
T ss_pred             cCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcC-----------C
Confidence             68999999999732 22322223    3344566666544    56666667778999999988773           3


Q ss_pred             CCCCChHHHHHHHHHHHHHHHhhcC---CCcEEEEecC
Q 025786          214 QAPINPYGKAKKMAEDIILDFSKNS---DMAVLQCHRF  248 (248)
Q Consensus       214 ~~~~~~Y~~sK~a~e~l~~~~~~~~---gi~~~~v~Pf  248 (248)
                      .++..+|+.||++.+.+++.++.++   |+++++++|.
T Consensus       158 ~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG  195 (281)
T 3svt_A          158 HRWFGAYGVTKSAVDHLMQLAADELGASWVRVNSIRPG  195 (281)
T ss_dssp             CTTCTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred             CCCChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeC
Confidence            4457899999999999999999884   6999999994

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=99.96  E-value=3.3e-28  Score=208.55  Aligned_cols=175  Identities=26%  Similarity=0.283  Sum_probs=145.1

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li  150 (248)
                      |+||||||+||||++++++|+++|++|++++|.......  ..++.+. ...++.++.+|++|.+++.++++..++|+||
T Consensus         4 ~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~--~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vi   80 (345)
T 2z1m_A            4 KRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFAS--WRLKELG-IENDVKIIHMDLLEFSNIIRTIEKVQPDEVY   80 (345)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTT--HHHHHTT-CTTTEEECCCCTTCHHHHHHHHHHHCCSEEE
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCccccc--ccHhhcc-ccCceeEEECCCCCHHHHHHHHHhcCCCEEE
Confidence            789999999999999999999999999999986543221  1222221 1246888999999999999998765689999


Q ss_pred             EcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCC-CEEEEeccceecCCCCCCCCCCCCCCCCCChHHHHHHHHHH
Q 025786          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV-DTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAED  229 (248)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~-~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e~  229 (248)
                      ||||.........+.+..++.|+.++.++++++.+.+. ++||++||.++||.....+++|+.+..+.++|+.||.++|.
T Consensus        81 h~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~~~~~Y~~sK~~~e~  160 (345)
T 2z1m_A           81 NLAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTVKPDTKFYQASTSEMFGKVQEIPQTEKTPFYPRSPYAVAKLFGHW  160 (345)
T ss_dssp             ECCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHH
T ss_pred             ECCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCCCCCCCccCCCCCCChhHHHHHHHHH
Confidence            99997543223445677888999999999999988775 89999999999998777788999998999999999999999


Q ss_pred             HHHHHhhcCCCcEEEEecC
Q 025786          230 IILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       230 l~~~~~~~~gi~~~~v~Pf  248 (248)
                      +++.++.++++++++++|+
T Consensus       161 ~~~~~~~~~~~~~~~~r~~  179 (345)
T 2z1m_A          161 ITVNYREAYNMFACSGILF  179 (345)
T ss_dssp             HHHHHHHHHCCCEEEEEEC
T ss_pred             HHHHHHHHhCCceEeeeee
Confidence            9999999989888888764

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.96  E-value=9.2e-28  Score=199.36  Aligned_cols=166  Identities=16%  Similarity=0.128  Sum_probs=128.0

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCC-CceEEEEccCCCHHHHHHHhhc-----
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEP-GRLQFIYADLGDAKAVNKFFSE-----  143 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~-----  143 (248)
                      +|++|||||+||||++++++|+++|++|++++|+....   .+..+++...+ .++.++++|++|++++++++++     
T Consensus        10 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~---~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   86 (262)
T 3pk0_A           10 GRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADI---DACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEF   86 (262)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHH---HHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH---HHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHHh
Confidence            39999999999999999999999999999999754333   33333332222 5789999999999999988875     


Q ss_pred             CCCCEEEEcccccccCCCCCCchhh----HhhhHHHHH----HHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCC
Q 025786          144 NAFDAVMHFAAVAYVGESTLDPLKY----YHNITSNTL----VVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (248)
Q Consensus       144 ~~iD~li~~Ag~~~~~~~~~~~~~~----~~~~~~~~~----~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~  215 (248)
                      +++|+||||||+....+..+.+.+.    ++.|+.++.    .+++.|++++.++||++||.....          .+.+
T Consensus        87 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~----------~~~~  156 (262)
T 3pk0_A           87 GGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPI----------TGYP  156 (262)
T ss_dssp             SCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTTT----------BCCT
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcc----------CCCC
Confidence            6899999999987655444434443    445555544    466777777788999999976531          1334


Q ss_pred             CCChHHHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          216 PINPYGKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                      +...|+.||++.+.+++.++.+   +|+++++++|.
T Consensus       157 ~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG  192 (262)
T 3pk0_A          157 GWSHYGATKAAQLGFMRTAAIELAPHKITVNAIMPG  192 (262)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEEC
T ss_pred             CChhhHHHHHHHHHHHHHHHHHHHhhCcEEEEEEeC
Confidence            5779999999999999999988   68999999994

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.96  E-value=6.5e-28  Score=202.04  Aligned_cols=168  Identities=15%  Similarity=0.109  Sum_probs=129.5

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCC----------CCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHH
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS----------RGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNK  139 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~----------~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~  139 (248)
                      +|++|||||+||||++++++|+++|++|++++|..          ++.+.+.+..+.+...+.++.++.+|++|.+++++
T Consensus        15 gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~   94 (280)
T 3pgx_A           15 GRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAALRE   94 (280)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHH
Confidence            39999999999999999999999999999999742          12333333334444445688999999999999999


Q ss_pred             Hhhc-----CCCCEEEEcccccccCCCCCCchhh----HhhhHHHHH----HHHHHHHHcC-CCEEEEeccceecCCCCC
Q 025786          140 FFSE-----NAFDAVMHFAAVAYVGESTLDPLKY----YHNITSNTL----VVLESMARHG-VDTLIYSSTCATYGEPEK  205 (248)
Q Consensus       140 ~~~~-----~~iD~li~~Ag~~~~~~~~~~~~~~----~~~~~~~~~----~ll~~~~~~~-~~~iV~~SS~~~~g~~~~  205 (248)
                      ++++     +++|+||||||+.......+.+.+.    ++.|+.++.    .+++.|++++ .++||++||..++.    
T Consensus        95 ~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----  170 (280)
T 3pgx_A           95 LVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLK----  170 (280)
T ss_dssp             HHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTS----
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchhhcc----
Confidence            8875     6899999999987654433333333    445555544    4666677665 67999999987762    


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          206 MPITEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       206 ~~~~e~~~~~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                             +.++...|+.||++.+.+++.++.+   +|+++++|+|.
T Consensus       171 -------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG  209 (280)
T 3pgx_A          171 -------ATPGNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPY  209 (280)
T ss_dssp             -------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred             -------CCCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeC
Confidence                   3445779999999999999999988   68999999994

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=99.96  E-value=5e-28  Score=201.20  Aligned_cols=163  Identities=16%  Similarity=0.119  Sum_probs=127.9

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      |++|||||+||||++++++|+++|++|++++|+..+.+   +..+++...+.++.++.+|++|.+++++++++     ++
T Consensus         5 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~---~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   81 (264)
T 3tfo_A            5 KVILITGASGGIGEGIARELGVAGAKILLGARRQARIE---AIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGR   81 (264)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHH---HHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHH---HHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            89999999999999999999999999999997543333   33333323356788999999999999988875     68


Q ss_pred             CCEEEEcccccccCCCCCCchhh----HhhhHHHH----HHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYVGESTLDPLKY----YHNITSNT----LVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (248)
Q Consensus       146 iD~li~~Ag~~~~~~~~~~~~~~----~~~~~~~~----~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (248)
                      +|+||||||+.......+.+.+.    ++.|+.++    +.+++.|++++.++||++||.+++.           +.++.
T Consensus        82 iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~-----------~~~~~  150 (264)
T 3tfo_A           82 IDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALS-----------VVPTA  150 (264)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTC-----------CCTTC
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHHcc-----------cCCCC
Confidence            99999999987554433333333    44555554    4577778777778999999988762           34456


Q ss_pred             ChHHHHHHHHHHHHHHHhhcC-CCcEEEEec
Q 025786          218 NPYGKAKKMAEDIILDFSKNS-DMAVLQCHR  247 (248)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~~~~~-gi~~~~v~P  247 (248)
                      ..|+.||++.+.+++.++.++ |+++++|+|
T Consensus       151 ~~Y~asKaal~~l~~~la~e~~gIrvn~v~P  181 (264)
T 3tfo_A          151 AVYCATKFAVRAISDGLRQESTNIRVTCVNP  181 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCSSEEEEEEEE
T ss_pred             hhHHHHHHHHHHHHHHHHHhCCCCEEEEEec
Confidence            789999999999999999886 899999998

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=99.96  E-value=6.9e-28  Score=199.45  Aligned_cols=165  Identities=14%  Similarity=0.105  Sum_probs=127.6

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~  144 (248)
                      +|+++||||+||||++++++|+++|++|++++|+....++..   +++...+.++.++++|++|.+++++++++     +
T Consensus        12 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   88 (256)
T 3gaf_A           12 DAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVA---AAIRQAGGKAIGLECNVTDEQHREAVIKAALDQFG   88 (256)
T ss_dssp             TCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH---HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---HHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            399999999999999999999999999999997543333333   33322356789999999999999888875     6


Q ss_pred             CCCEEEEcccccccCCCCCC---chhhHhhhHHHHH----HHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCC
Q 025786          145 AFDAVMHFAAVAYVGESTLD---PLKYYHNITSNTL----VVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (248)
Q Consensus       145 ~iD~li~~Ag~~~~~~~~~~---~~~~~~~~~~~~~----~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (248)
                      ++|+||||||.......+.+   .+..++.|+.++.    .+++.|++++.++||++||..++           .+.++.
T Consensus        89 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~-----------~~~~~~  157 (256)
T 3gaf_A           89 KITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGE-----------NTNVRM  157 (256)
T ss_dssp             CCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGT-----------CCCTTC
T ss_pred             CCCEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHc-----------CCCCCc
Confidence            89999999998755443222   2233445555544    46666777777899999998876           234557


Q ss_pred             ChHHHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          218 NPYGKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                      ..|+.||++.+.+++.++.+   .|+++++++|.
T Consensus       158 ~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG  191 (256)
T 3gaf_A          158 ASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPG  191 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEEc
Confidence            89999999999999999988   48999999983

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=99.96  E-value=4.2e-28  Score=199.56  Aligned_cols=165  Identities=18%  Similarity=0.134  Sum_probs=126.9

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      |+++||||+||||++++++|+++|++|+++++..  .+...+..+++...+.++.++++|++|.+++++++++     ++
T Consensus         5 k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   82 (246)
T 3osu_A            5 KSALVTGASRGIGRSIALQLAEEGYNVAVNYAGS--KEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGS   82 (246)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSC--HHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCC--HHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            8999999999999999999999999999988632  2223333333323356788999999999999988875     68


Q ss_pred             CCEEEEcccccccCCCCCCchh----hHhhhHHHHHH----HHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYVGESTLDPLK----YYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (248)
Q Consensus       146 iD~li~~Ag~~~~~~~~~~~~~----~~~~~~~~~~~----ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (248)
                      +|+||||||+.......+.+.+    .++.|+.++.+    +++.|++++.++||++||...+.           +.++.
T Consensus        83 id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~~  151 (246)
T 3osu_A           83 LDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAV-----------GNPGQ  151 (246)
T ss_dssp             CCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH-----------CCTTC
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcC-----------CCCCC
Confidence            9999999998755444333333    44556655444    55666777778999999977662           33457


Q ss_pred             ChHHHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          218 NPYGKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                      .+|+.||++.+.+++.++.+   +|+++++++|.
T Consensus       152 ~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG  185 (246)
T 3osu_A          152 ANYVATKAGVIGLTKSAARELASRGITVNAVAPG  185 (246)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred             hHHHHHHHHHHHHHHHHHHHhcccCeEEEEEEEC
Confidence            78999999999999999986   68999999993

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=99.96  E-value=6.6e-28  Score=199.15  Aligned_cols=163  Identities=13%  Similarity=0.146  Sum_probs=128.2

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc----CCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----NAF  146 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~----~~i  146 (248)
                      |+++||||+||||++++++|+++|++|++++|+....++..+.+++   .+.++.++.+|++|.+++++++++    +++
T Consensus         8 k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~Dv~~~~~v~~~~~~~~~~g~i   84 (252)
T 3h7a_A            8 ATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEA---AGGRIVARSLDARNEDEVTAFLNAADAHAPL   84 (252)
T ss_dssp             CEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHH---TTCEEEEEECCTTCHHHHHHHHHHHHHHSCE
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh---cCCeEEEEECcCCCHHHHHHHHHHHHhhCCc
Confidence            8999999999999999999999999999999765444444333333   356899999999999999988875    589


Q ss_pred             CEEEEcccccccCCCCCCchh----hHhhhHHHH----HHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCCC
Q 025786          147 DAVMHFAAVAYVGESTLDPLK----YYHNITSNT----LVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPIN  218 (248)
Q Consensus       147 D~li~~Ag~~~~~~~~~~~~~----~~~~~~~~~----~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~  218 (248)
                      |+||||||+....+..+.+.+    .++.|+.++    ..+++.|++++.++||++||.+++.           +.++..
T Consensus        85 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~~~  153 (252)
T 3h7a_A           85 EVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATASLR-----------GGSGFA  153 (252)
T ss_dssp             EEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTC-----------CCTTCH
T ss_pred             eEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHHcC-----------CCCCCc
Confidence            999999998765443333333    344555543    4477777877778999999987762           344577


Q ss_pred             hHHHHHHHHHHHHHHHhhc---CCCcE-EEEec
Q 025786          219 PYGKAKKMAEDIILDFSKN---SDMAV-LQCHR  247 (248)
Q Consensus       219 ~Y~~sK~a~e~l~~~~~~~---~gi~~-~~v~P  247 (248)
                      .|+.||++.+.+++.++.+   .|+++ ++++|
T Consensus       154 ~Y~asKaa~~~l~~~la~e~~~~gi~v~n~v~P  186 (252)
T 3h7a_A          154 AFASAKFGLRAVAQSMARELMPKNIHVAHLIID  186 (252)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred             cHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecC
Confidence            8999999999999999988   48999 89988

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.96  E-value=3.6e-28  Score=211.23  Aligned_cols=178  Identities=25%  Similarity=0.266  Sum_probs=142.9

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCc--chhhhhhhhhcC-CCCceEEEEccCCCHHHHHHHhhcCCCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGN--IGAVKVLQELFP-EPGRLQFIYADLGDAKAVNKFFSENAFD  147 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~--~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~iD  147 (248)
                      |+||||||+||||++++++|+++|++|++++|.....  +........... ...++.++.+|++|.+++.++++..++|
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d  104 (375)
T 1t2a_A           25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKPT  104 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhcCCC
Confidence            7899999999999999999999999999999864331  111111010000 1246888999999999999998765689


Q ss_pred             EEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCC---CEEEEeccceecCCCCCCCCCCCCCCCCCChHHHHH
Q 025786          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV---DTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAK  224 (248)
Q Consensus       148 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~---~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK  224 (248)
                      +||||||.........++...++.|+.++.++++++.+.+.   ++||++||.++|+.....+++|+.+..|.++|+.||
T Consensus       105 ~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~~~~~~~~~Y~~sK  184 (375)
T 1t2a_A          105 EIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAK  184 (375)
T ss_dssp             EEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTTSCCCCCSHHHHHH
T ss_pred             EEEECCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhCCCccceEEEecchhhhCCCCCCCCCccCCCCCCChhHHHH
Confidence            99999997543222335566788899999999999988776   799999999999877777889999888999999999


Q ss_pred             HHHHHHHHHHhhcCCCcEEEEecC
Q 025786          225 KMAEDIILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       225 ~a~e~l~~~~~~~~gi~~~~v~Pf  248 (248)
                      .++|.+++.++.+++++++++|||
T Consensus       185 ~~~e~~~~~~~~~~~~~~~i~r~~  208 (375)
T 1t2a_A          185 LYAYWIVVNFREAYNLFAVNGILF  208 (375)
T ss_dssp             HHHHHHHHHHHHHHCCEEEEEEEC
T ss_pred             HHHHHHHHHHHHHhCCCEEEEecc
Confidence            999999999999999999999985

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=99.96  E-value=7.5e-28  Score=199.47  Aligned_cols=163  Identities=17%  Similarity=0.190  Sum_probs=127.0

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEE-ecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIV-DNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~  144 (248)
                      |++|||||+||||++++++|+++|++|+++ +|+   .+...+..+++...+.++.++.+|++|.+++++++++     +
T Consensus         5 k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~---~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   81 (258)
T 3oid_A            5 KCALVTGSSRGVGKAAAIRLAENGYNIVINYARS---KKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFG   81 (258)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSC---HHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCC---HHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            899999999999999999999999999987 543   2333333334433456899999999999999988876     6


Q ss_pred             CCCEEEEcccccccCCCCCCchhh----HhhhHHHHH----HHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCC
Q 025786          145 AFDAVMHFAAVAYVGESTLDPLKY----YHNITSNTL----VVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (248)
Q Consensus       145 ~iD~li~~Ag~~~~~~~~~~~~~~----~~~~~~~~~----~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~  216 (248)
                      ++|+||||||+....+..+.+.+.    ++.|+.++.    .+++.|++++.++||++||.+.+.           +.++
T Consensus        82 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~-----------~~~~  150 (258)
T 3oid_A           82 RLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIR-----------YLEN  150 (258)
T ss_dssp             CCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGGTS-----------BCTT
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhCC-----------CCCC
Confidence            899999999976554433333333    445555544    456677777778999999987762           3455


Q ss_pred             CChHHHHHHHHHHHHHHHhhcC---CCcEEEEec
Q 025786          217 INPYGKAKKMAEDIILDFSKNS---DMAVLQCHR  247 (248)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~~~~~---gi~~~~v~P  247 (248)
                      ...|+.||++.+.+++.++.++   |+++++++|
T Consensus       151 ~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~P  184 (258)
T 3oid_A          151 YTTVGVSKAALEALTRYLAVELSPKQIIVNAVSG  184 (258)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEE
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEee
Confidence            7899999999999999999885   799999998

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=99.96  E-value=2.2e-28  Score=207.36  Aligned_cols=169  Identities=34%  Similarity=0.473  Sum_probs=140.0

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li  150 (248)
                      |+||||||+||||++++++|+++|++|++++|......   +   .+   ..++.++.+|++|.+++.+++++.++|+||
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~---~---~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi   71 (311)
T 2p5y_A            1 MRVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKR---E---NV---PKGVPFFRVDLRDKEGVERAFREFRPTHVS   71 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCG---G---GS---CTTCCEECCCTTCHHHHHHHHHHHCCSEEE
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCch---h---hc---ccCeEEEECCCCCHHHHHHHHHhcCCCEEE
Confidence            47999999999999999999999999999987432211   1   11   135678899999999999998765799999


Q ss_pred             EcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccc-eecCC-CCCCCCCCCCCCCCCChHHHHHHHHH
Q 025786          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTC-ATYGE-PEKMPITEETPQAPINPYGKAKKMAE  228 (248)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~-~~~g~-~~~~~~~e~~~~~~~~~Y~~sK~a~e  228 (248)
                      |+|+.........++...++.|+.++.++++++.+.+.++||++||. ++||. ....+++|+.+..|.++|+.||.++|
T Consensus        72 ~~a~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~~g~~~~~~~~~E~~~~~~~~~Y~~sK~~~e  151 (311)
T 2p5y_A           72 HQAAQASVKVSVEDPVLDFEVNLLGGLNLLEACRQYGVEKLVFASTGGAIYGEVPEGERAEETWPPRPKSPYAASKAAFE  151 (311)
T ss_dssp             ECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEHHHHHCCCCTTCCBCTTSCCCCCSHHHHHHHHHH
T ss_pred             ECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCChhhcCCCCCCCCcCCCCCCCCCChHHHHHHHHH
Confidence            99996532222335566788899999999999998888899999998 88886 45567888888888999999999999


Q ss_pred             HHHHHHhhcCCCcEEEEecC
Q 025786          229 DIILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       229 ~l~~~~~~~~gi~~~~v~Pf  248 (248)
                      ++++.++.++|++++++||+
T Consensus       152 ~~~~~~~~~~~~~~~~lrp~  171 (311)
T 2p5y_A          152 HYLSVYGQSYGLKWVSLRYG  171 (311)
T ss_dssp             HHHHHHHHHHCCCEEEEEEC
T ss_pred             HHHHHHHHHcCCCEEEEeec
Confidence            99999998899999999995

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=99.96  E-value=3.3e-28  Score=202.94  Aligned_cols=165  Identities=15%  Similarity=0.094  Sum_probs=127.3

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~  144 (248)
                      +|++|||||+||||++++++|+++|++|++++|+....++..+.+++.   +.++.++.+|++|.+++++++++     +
T Consensus        28 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  104 (270)
T 3ftp_A           28 KQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQA---GLEGRGAVLNVNDATAVDALVESTLKEFG  104 (270)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH---TCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCcEEEEEEeCCCHHHHHHHHHHHHHHcC
Confidence            399999999999999999999999999999997543333333333322   45688899999999999988875     6


Q ss_pred             CCCEEEEcccccccCCCCCCchh----hHhhhHHHHHH----HHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCC
Q 025786          145 AFDAVMHFAAVAYVGESTLDPLK----YYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (248)
Q Consensus       145 ~iD~li~~Ag~~~~~~~~~~~~~----~~~~~~~~~~~----ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~  216 (248)
                      ++|+||||||+.......+.+.+    .++.|+.++..    +++.|.+++.++||++||..++.           +.++
T Consensus       105 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~  173 (270)
T 3ftp_A          105 ALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSA-----------GNPG  173 (270)
T ss_dssp             CCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH-----------CCTT
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCC-----------CCCC
Confidence            89999999998765443333333    34455555444    56666677778999999987762           3345


Q ss_pred             CChHHHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          217 INPYGKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                      ...|+.||++.+.+++.++.+   .|+++++|+|.
T Consensus       174 ~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG  208 (270)
T 3ftp_A          174 QVNYAAAKAGVAGMTRALAREIGSRGITVNCVAPG  208 (270)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred             chhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeC
Confidence            678999999999999999988   58999999983

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=99.96  E-value=1.2e-27  Score=200.93  Aligned_cols=168  Identities=16%  Similarity=0.126  Sum_probs=128.4

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCC-------------CcchhhhhhhhhcCCCCceEEEEccCCCHHH
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSR-------------GNIGAVKVLQELFPEPGRLQFIYADLGDAKA  136 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~  136 (248)
                      +|++|||||++|||++++++|+++|++|++++|+..             ..+.+.+..+++...+.++.++++|++|+++
T Consensus        11 ~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~   90 (286)
T 3uve_A           11 GKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRDYDA   90 (286)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCCHHH
Confidence            399999999999999999999999999999997521             1233333334443445689999999999999


Q ss_pred             HHHHhhc-----CCCCEEEEcccccccCC-CCCCchh----hHhhhHHHHH----HHHHHHHHcC-CCEEEEeccceecC
Q 025786          137 VNKFFSE-----NAFDAVMHFAAVAYVGE-STLDPLK----YYHNITSNTL----VVLESMARHG-VDTLIYSSTCATYG  201 (248)
Q Consensus       137 ~~~~~~~-----~~iD~li~~Ag~~~~~~-~~~~~~~----~~~~~~~~~~----~ll~~~~~~~-~~~iV~~SS~~~~g  201 (248)
                      +++++++     +++|+||||||+..... ..+.+.+    .++.|+.++.    .+++.|.+++ .++||++||...+.
T Consensus        91 v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~  170 (286)
T 3uve_A           91 LKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGGLK  170 (286)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS
T ss_pred             HHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEECchhhcc
Confidence            9988875     68999999999865433 2222333    4455555544    4666676655 57999999988762


Q ss_pred             CCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          202 EPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       202 ~~~~~~~~e~~~~~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                                 +.++...|+.||++.+.+++.++.+   +||++++|+|.
T Consensus       171 -----------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG  209 (286)
T 3uve_A          171 -----------AYPHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPT  209 (286)
T ss_dssp             -----------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEES
T ss_pred             -----------CCCCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecC
Confidence                       3445778999999999999999988   68999999983

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=99.96  E-value=7.7e-28  Score=205.93  Aligned_cols=173  Identities=27%  Similarity=0.419  Sum_probs=141.8

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCC--CEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDS--YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~  148 (248)
                      |+||||||+||||++++++|+++|  ++|++++|...... . +.++++. ...++.++.+|++|.+++.+++.  ++|+
T Consensus         4 m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~-~-~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~--~~d~   78 (336)
T 2hun_A            4 MKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSN-P-ANLKDLE-DDPRYTFVKGDVADYELVKELVR--KVDG   78 (336)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCC-G-GGGTTTT-TCTTEEEEECCTTCHHHHHHHHH--TCSE
T ss_pred             CeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCc-h-hHHhhhc-cCCceEEEEcCCCCHHHHHHHhh--CCCE
Confidence            679999999999999999999997  89999987542111 1 1112221 13478899999999999999885  7999


Q ss_pred             EEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCC-CEEEEeccceecCCCCCCCCCCCCCCCCCChHHHHHHHH
Q 025786          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV-DTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMA  227 (248)
Q Consensus       149 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~-~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~  227 (248)
                      ||||||.........+++..++.|+.++.++++++.+.+. ++||++||.++||.....+++|+.+..+.++|+.||.++
T Consensus        79 vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~  158 (336)
T 2hun_A           79 VVHLAAESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVSTDEVYGDILKGSFTENDRLMPSSPYSATKAAS  158 (336)
T ss_dssp             EEECCCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEEGGGGCCCSSSCBCTTBCCCCCSHHHHHHHHH
T ss_pred             EEECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEeccHHHHCCCCCCCcCCCCCCCCCCccHHHHHHH
Confidence            9999997542222235567788999999999999988764 699999999999877667889998888999999999999


Q ss_pred             HHHHHHHhhcCCCcEEEEecC
Q 025786          228 EDIILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       228 e~l~~~~~~~~gi~~~~v~Pf  248 (248)
                      |++++.++.++|++++++||+
T Consensus       159 e~~~~~~~~~~~~~~~ilrp~  179 (336)
T 2hun_A          159 DMLVLGWTRTYNLNASITRCT  179 (336)
T ss_dssp             HHHHHHHHHHTTCEEEEEEEC
T ss_pred             HHHHHHHHHHhCCCEEEEeee
Confidence            999999999999999999995

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=99.96  E-value=1.1e-27  Score=202.48  Aligned_cols=170  Identities=14%  Similarity=0.142  Sum_probs=128.5

Q ss_pred             CCCceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCC---------CcchhhhhhhhhcCCCCceEEEEccCCCHHHH
Q 025786           67 EEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSR---------GNIGAVKVLQELFPEPGRLQFIYADLGDAKAV  137 (248)
Q Consensus        67 ~~~~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~---------~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~  137 (248)
                      ..+ |++|||||++|||++++++|+++|++|++++|+..         ..+.+.+..+++...+.++.++++|++|.+++
T Consensus        26 l~g-k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v  104 (299)
T 3t7c_A           26 VEG-KVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAM  104 (299)
T ss_dssp             TTT-CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHH
T ss_pred             cCC-CEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHH
Confidence            344 99999999999999999999999999999997522         12233333333333356899999999999999


Q ss_pred             HHHhhc-----CCCCEEEEcccccccCC-CCCCch----hhHhhhHHHHHH----HHHHHHHcC-CCEEEEeccceecCC
Q 025786          138 NKFFSE-----NAFDAVMHFAAVAYVGE-STLDPL----KYYHNITSNTLV----VLESMARHG-VDTLIYSSTCATYGE  202 (248)
Q Consensus       138 ~~~~~~-----~~iD~li~~Ag~~~~~~-~~~~~~----~~~~~~~~~~~~----ll~~~~~~~-~~~iV~~SS~~~~g~  202 (248)
                      ++++++     +++|+||||||+..... ..+.+.    ..++.|+.++..    +++.|.+.+ .++||++||.+.+. 
T Consensus       105 ~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~~~~-  183 (299)
T 3t7c_A          105 QAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLR-  183 (299)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGGGTS-
T ss_pred             HHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhcc-
Confidence            988875     68999999999865433 333233    344455555444    566665554 67999999987762 


Q ss_pred             CCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHhhcC---CCcEEEEecC
Q 025786          203 PEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNS---DMAVLQCHRF  248 (248)
Q Consensus       203 ~~~~~~~e~~~~~~~~~Y~~sK~a~e~l~~~~~~~~---gi~~~~v~Pf  248 (248)
                                +.++...|+.||++++.+++.++.++   ||++++|+|.
T Consensus       184 ----------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG  222 (299)
T 3t7c_A          184 ----------GAENIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPS  222 (299)
T ss_dssp             ----------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEES
T ss_pred             ----------CCCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecC
Confidence                      34457799999999999999999884   8999999983

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=99.96  E-value=2.8e-28  Score=211.61  Aligned_cols=168  Identities=20%  Similarity=0.340  Sum_probs=141.8

Q ss_pred             CceEEEEecCCchhHHHHHHHHHHC-CCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCC-CHHHHHHHhhcCCC
Q 025786           69 GVTHVLVTGGAGYIGSHAALRLLKD-SYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG-DAKAVNKFFSENAF  146 (248)
Q Consensus        69 ~~k~vlITGasg~IG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-~~~~~~~~~~~~~i  146 (248)
                      .||+||||||||+||++++++|+++ |++|++++|+..+.....        ...++.++.+|++ |.+++.++++  ++
T Consensus        23 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~--------~~~~v~~~~~Dl~~d~~~~~~~~~--~~   92 (372)
T 3slg_A           23 KAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLV--------KHERMHFFEGDITINKEWVEYHVK--KC   92 (372)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGG--------GSTTEEEEECCTTTCHHHHHHHHH--HC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhc--------cCCCeEEEeCccCCCHHHHHHHhc--cC
Confidence            3589999999999999999999998 999999998654322211        1247899999999 9999999998  68


Q ss_pred             CEEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCC-------CCCCh
Q 025786          147 DAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQ-------APINP  219 (248)
Q Consensus       147 D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~-------~~~~~  219 (248)
                      |+|||+||.........++.+.++.|+.++.++++++++.+ ++||++||.++||.....+++|+.+.       .|.+.
T Consensus        93 d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~p~~~p~~~  171 (372)
T 3slg_A           93 DVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG-KHLVFPSTSEVYGMCADEQFDPDASALTYGPINKPRWI  171 (372)
T ss_dssp             SEEEECBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHT-CEEEEECCGGGGBSCCCSSBCTTTCCEEECCTTCTTHH
T ss_pred             CEEEEcCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhC-CcEEEeCcHHHhCCCCCCCCCccccccccCCCCCCCCc
Confidence            99999999765433344666788889999999999999988 89999999999998777777777654       56779


Q ss_pred             HHHHHHHHHHHHHHHhhcCCCcEEEEecC
Q 025786          220 YGKAKKMAEDIILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       220 Y~~sK~a~e~l~~~~~~~~gi~~~~v~Pf  248 (248)
                      |+.||.++|.+++.++.+ |++++++||+
T Consensus       172 Y~~sK~~~E~~~~~~~~~-g~~~~ilRp~  199 (372)
T 3slg_A          172 YACSKQLMDRVIWGYGME-GLNFTLFRPF  199 (372)
T ss_dssp             HHHHHHHHHHHHHHHHTT-TCEEEEEEEC
T ss_pred             HHHHHHHHHHHHHHHHHC-CCCEEEEccc
Confidence            999999999999999988 9999999995

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=99.96  E-value=6.3e-28  Score=208.31  Aligned_cols=174  Identities=21%  Similarity=0.225  Sum_probs=142.8

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li  150 (248)
                      |+||||||+||||++++++|+++|++|++++|+..+.....+.+.    ...++.++.+|++|.+++.++++..++|+||
T Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vi   85 (357)
T 1rkx_A           10 KRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETAR----VADGMQSEIGDIRDQNKLLESIREFQPEIVF   85 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTT----TTTTSEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred             CEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhc----cCCceEEEEccccCHHHHHHHHHhcCCCEEE
Confidence            799999999999999999999999999999986544333222211    1347889999999999999998754689999


Q ss_pred             EcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcC-CCEEEEeccceecCCCCC-CCCCCCCCCCCCChHHHHHHHHH
Q 025786          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHG-VDTLIYSSTCATYGEPEK-MPITEETPQAPINPYGKAKKMAE  228 (248)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~-~~~iV~~SS~~~~g~~~~-~~~~e~~~~~~~~~Y~~sK~a~e  228 (248)
                      ||||..........+...++.|+.++.++++++.+.+ .++||++||..+||.... .+++|+.+..+.+.|+.||.++|
T Consensus        86 h~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~E~~~~~~~~~Y~~sK~~~e  165 (357)
T 1rkx_A           86 HMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENEAMGGYDPYSNSKGCAE  165 (357)
T ss_dssp             ECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTTSCBCCSSHHHHHHHHHH
T ss_pred             ECCCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecCHHHhCCCCcCCCCCCCCCCCCCCccHHHHHHHH
Confidence            9999632222234556778889999999999998876 789999999999986653 46788888888999999999999


Q ss_pred             HHHHHHhhcC---------CCcEEEEecC
Q 025786          229 DIILDFSKNS---------DMAVLQCHRF  248 (248)
Q Consensus       229 ~l~~~~~~~~---------gi~~~~v~Pf  248 (248)
                      ++++.++.++         |++++++||+
T Consensus       166 ~~~~~~~~~~~~~~~~~~~gi~~~~lrp~  194 (357)
T 1rkx_A          166 LVTSSYRNSFFNPANYGQHGTAVATVRAG  194 (357)
T ss_dssp             HHHHHHHHHHSCGGGHHHHCCEEEEEECC
T ss_pred             HHHHHHHHHHhhhhccccCCceEEEEeec
Confidence            9999998875         9999999995

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=99.96  E-value=1.2e-27  Score=200.20  Aligned_cols=167  Identities=16%  Similarity=0.124  Sum_probs=128.1

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCC----------CcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHH
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSR----------GNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKF  140 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~----------~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~  140 (248)
                      |++|||||++|||++++++|+++|++|++++|..+          +.+.+.+..+.+...+.++.++.+|++|.++++++
T Consensus        12 k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   91 (277)
T 3tsc_A           12 RVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDRLRKV   91 (277)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred             CEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHH
Confidence            99999999999999999999999999999987422          22333333333333356789999999999999998


Q ss_pred             hhc-----CCCCEEEEcccccccCCCCCCchh----hHhhhHHHHH----HHHHHHHHcC-CCEEEEeccceecCCCCCC
Q 025786          141 FSE-----NAFDAVMHFAAVAYVGESTLDPLK----YYHNITSNTL----VVLESMARHG-VDTLIYSSTCATYGEPEKM  206 (248)
Q Consensus       141 ~~~-----~~iD~li~~Ag~~~~~~~~~~~~~----~~~~~~~~~~----~ll~~~~~~~-~~~iV~~SS~~~~g~~~~~  206 (248)
                      +++     +++|+||||||+.......+.+.+    .++.|+.++.    .+++.|.+++ .++||++||.+.+.     
T Consensus        92 ~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~-----  166 (277)
T 3tsc_A           92 VDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMK-----  166 (277)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS-----
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHhhCC-----
Confidence            876     689999999998765443333333    3455555543    4666677665 57999999988762     


Q ss_pred             CCCCCCCCCCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          207 PITEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       207 ~~~e~~~~~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                            +.++...|+.||++.+.+++.++.+   +|+++++|+|.
T Consensus       167 ------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG  205 (277)
T 3tsc_A          167 ------MQPFMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPG  205 (277)
T ss_dssp             ------CCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEES
T ss_pred             ------CCCCchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeC
Confidence                  3445678999999999999999988   48999999983

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=99.96  E-value=6.4e-28  Score=198.99  Aligned_cols=165  Identities=16%  Similarity=0.116  Sum_probs=124.0

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      |++|||||+||||++++++|+++|++|++++|+....++..+.+.+......++.++++|++|.+++++++++     ++
T Consensus         8 k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   87 (250)
T 3nyw_A            8 GLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQKYGA   87 (250)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHHHCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHhcCC
Confidence            8999999999999999999999999999999765444444444433322235788999999999999988875     68


Q ss_pred             CCEEEEcccccccCCCCCCchhh----HhhhHHH----HHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYVGESTLDPLKY----YHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (248)
Q Consensus       146 iD~li~~Ag~~~~~~~~~~~~~~----~~~~~~~----~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (248)
                      +|+||||||+...... +.+.+.    ++.|+.+    ++.+++.|++++.++||++||.+.+.           +..+.
T Consensus        88 iD~lvnnAg~~~~~~~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~~  155 (250)
T 3nyw_A           88 VDILVNAAAMFMDGSL-SEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAKY-----------GFADG  155 (250)
T ss_dssp             EEEEEECCCCCCCCCC-SCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC------------------CCT
T ss_pred             CCEEEECCCcCCCCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHhcC-----------CCCCC
Confidence            9999999998655444 333333    3445544    34466777777778999999977652           23347


Q ss_pred             ChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          218 NPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      ..|+.||++.+.+++.++.+   .|+++++++|
T Consensus       156 ~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~P  188 (250)
T 3nyw_A          156 GIYGSTKFALLGLAESLYRELAPLGIRVTTLCP  188 (250)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE
T ss_pred             cchHHHHHHHHHHHHHHHHHhhhcCcEEEEEec
Confidence            79999999999999999988   4899999998

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=99.96  E-value=1.1e-27  Score=205.07  Aligned_cols=173  Identities=27%  Similarity=0.392  Sum_probs=142.6

Q ss_pred             eEEEEecCCchhHHHHHHHHHHC---C---CEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKD---S---YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSEN  144 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~---G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~  144 (248)
                      |+||||||+||||++++++|+++   |   ++|++++|......  .+.++.+. ...++.++.+|++|.+++.+++.  
T Consensus         1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~--~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~--   75 (337)
T 1r6d_A            1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGN--RANLAPVD-ADPRLRFVHGDIRDAGLLARELR--   75 (337)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCC--GGGGGGGT-TCTTEEEEECCTTCHHHHHHHTT--
T ss_pred             CeEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCc--hhhhhhcc-cCCCeEEEEcCCCCHHHHHHHhc--
Confidence            47999999999999999999997   8   99999997542211  11112221 13478899999999999999885  


Q ss_pred             CCCEEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCCChHHHHH
Q 025786          145 AFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAK  224 (248)
Q Consensus       145 ~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK  224 (248)
                      ++|+||||||.........+++..++.|+.++.++++++.+.+.++||++||.++||.....+++|+.+..+.+.|+.||
T Consensus        76 ~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK  155 (337)
T 1r6d_A           76 GVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDSGSWTESSPLEPNSPYAASK  155 (337)
T ss_dssp             TCCEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCCSSSCBCTTSCCCCCSHHHHHH
T ss_pred             CCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecchHHhCCCCCCCCCCCCCCCCCCchHHHH
Confidence            79999999997542222235567888999999999999999888899999999999876667788998888999999999


Q ss_pred             HHHHHHHHHHhhcCCCcEEEEecC
Q 025786          225 KMAEDIILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       225 ~a~e~l~~~~~~~~gi~~~~v~Pf  248 (248)
                      .++|++++.++.++|++++++||+
T Consensus       156 ~~~e~~~~~~~~~~g~~~~ilrp~  179 (337)
T 1r6d_A          156 AGSDLVARAYHRTYGLDVRITRCC  179 (337)
T ss_dssp             HHHHHHHHHHHHHHCCCEEEEEEC
T ss_pred             HHHHHHHHHHHHHHCCCEEEEEee
Confidence            999999999999899999999985

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=99.96  E-value=1.6e-27  Score=197.53  Aligned_cols=164  Identities=12%  Similarity=0.044  Sum_probs=125.1

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc------C
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE------N  144 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~------~  144 (248)
                      |+++||||+||||++++++|+++|++|++++|+...   ..+..+++...+.++.++.+|++|++++++++++      +
T Consensus        10 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~---~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   86 (260)
T 2ae2_A           10 CTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKE---LNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHG   86 (260)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHH---HHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTT
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHH---HHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            899999999999999999999999999999975432   2222222222245788999999999999988865      5


Q ss_pred             CCCEEEEcccccccCCCCCCc----hhhHhhhHHHHHH----HHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCC
Q 025786          145 AFDAVMHFAAVAYVGESTLDP----LKYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (248)
Q Consensus       145 ~iD~li~~Ag~~~~~~~~~~~----~~~~~~~~~~~~~----ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~  216 (248)
                      ++|+||||||+....+..+.+    +..++.|+.++.+    +++.|++++.++||++||..++.           +.++
T Consensus        87 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~  155 (260)
T 2ae2_A           87 KLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGAL-----------AVPY  155 (260)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTS-----------CCTT
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcc-----------CCCC
Confidence            899999999986543322222    2344556655444    55666677778999999987762           3345


Q ss_pred             CChHHHHHHHHHHHHHHHhhcC---CCcEEEEecC
Q 025786          217 INPYGKAKKMAEDIILDFSKNS---DMAVLQCHRF  248 (248)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~~~~~---gi~~~~v~Pf  248 (248)
                      ...|+.||++.+.+++.++.++   |+++++++|-
T Consensus       156 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg  190 (260)
T 2ae2_A          156 EAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPG  190 (260)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEC
T ss_pred             cchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecC
Confidence            6789999999999999999885   8999999983

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=99.96  E-value=1.4e-27  Score=199.92  Aligned_cols=162  Identities=17%  Similarity=0.166  Sum_probs=130.6

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~  144 (248)
                      +|++|||||+||||++++++|+++|++|++++|+...   ..+..++.   +.++.++.+|++|.+++++++++     +
T Consensus         5 ~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~---~~~~~~~~---~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g   78 (281)
T 3m1a_A            5 AKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEA---LDDLVAAY---PDRAEAISLDVTDGERIDVVAADVLARYG   78 (281)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGG---GHHHHHHC---TTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHH---HHHHHHhc---cCCceEEEeeCCCHHHHHHHHHHHHHhCC
Confidence            4899999999999999999999999999999975433   22322222   35789999999999999988875     5


Q ss_pred             CCCEEEEcccccccCCCCCCch----hhHhhhHHH----HHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCC
Q 025786          145 AFDAVMHFAAVAYVGESTLDPL----KYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (248)
Q Consensus       145 ~iD~li~~Ag~~~~~~~~~~~~----~~~~~~~~~----~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~  216 (248)
                      ++|+||||||........+.+.    ..++.|+.+    ++.+++.|++++.++||++||..++           .+.++
T Consensus        79 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~~~-----------~~~~~  147 (281)
T 3m1a_A           79 RVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGGQ-----------LSFAG  147 (281)
T ss_dssp             CCSEEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT-----------CCCTT
T ss_pred             CCCEEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCcccc-----------CCCCC
Confidence            8999999999865544333333    345567777    6778888888888899999998776           24556


Q ss_pred             CChHHHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          217 INPYGKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                      ..+|+.||++++.+++.++.+   +|+++++++|.
T Consensus       148 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg  182 (281)
T 3m1a_A          148 FSAYSATKAALEQLSEGLADEVAPFGIKVLIVEPG  182 (281)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred             chHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecC
Confidence            789999999999999999988   79999999994

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=99.96  E-value=8.9e-28  Score=200.22  Aligned_cols=166  Identities=16%  Similarity=0.105  Sum_probs=126.8

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~  144 (248)
                      +|++|||||+||||++++++|+++|++|++++|..  .+...+..+++...+.++.++++|++|.+++++++++     +
T Consensus        28 ~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g  105 (269)
T 4dmm_A           28 DRIALVTGASRGIGRAIALELAAAGAKVAVNYASS--AGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIERWG  105 (269)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSC--HHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCC--hHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            39999999999999999999999999999988632  2222232233322355789999999999999988875     6


Q ss_pred             CCCEEEEcccccccCCCCCCchh----hHhhhHHHHH----HHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCC
Q 025786          145 AFDAVMHFAAVAYVGESTLDPLK----YYHNITSNTL----VVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (248)
Q Consensus       145 ~iD~li~~Ag~~~~~~~~~~~~~----~~~~~~~~~~----~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~  216 (248)
                      ++|+||||||+.......+.+.+    .++.|+.++.    .+++.|++++.++||++||.+++.           +.++
T Consensus       106 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~  174 (269)
T 4dmm_A          106 RLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEM-----------GNPG  174 (269)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHHH-----------CCTT
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcC-----------CCCC
Confidence            89999999998755443333333    3445555543    466667777778999999987652           2344


Q ss_pred             CChHHHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          217 INPYGKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                      ...|+.||++.+.+++.++.+   .|+++++|+|.
T Consensus       175 ~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG  209 (269)
T 4dmm_A          175 QANYSAAKAGVIGLTKTVAKELASRGITVNAVAPG  209 (269)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEEC
T ss_pred             chhHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEEC
Confidence            678999999999999999987   58999999983

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=99.96  E-value=1e-27  Score=200.03  Aligned_cols=162  Identities=14%  Similarity=0.083  Sum_probs=126.7

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~  144 (248)
                      +|+++||||+||||++++++|+++|++|++++|+....   .+..+++   +.++.++.+|++|.+++++++++     +
T Consensus        11 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~---~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   84 (271)
T 3tzq_B           11 NKVAIITGACGGIGLETSRVLARAGARVVLADLPETDL---AGAAASV---GRGAVHHVVDLTNEVSVRALIDFTIDTFG   84 (271)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCH---HHHHHHH---CTTCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHH---HHHHHHh---CCCeEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            39999999999999999999999999999999754433   3333333   34688899999999999988875     6


Q ss_pred             CCCEEEEccccccc--CCCCCCc----hhhHhhhHHHHHH----HHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCC
Q 025786          145 AFDAVMHFAAVAYV--GESTLDP----LKYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQ  214 (248)
Q Consensus       145 ~iD~li~~Ag~~~~--~~~~~~~----~~~~~~~~~~~~~----ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~  214 (248)
                      ++|+||||||+...  ....+.+    +..++.|+.++..    +++.|++++.++||++||..++.           +.
T Consensus        85 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~-----------~~  153 (271)
T 3tzq_B           85 RLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHA-----------AY  153 (271)
T ss_dssp             CCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTS-----------BC
T ss_pred             CCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCHHHcC-----------CC
Confidence            89999999998632  1112222    3345566666444    56666777778999999987762           34


Q ss_pred             CCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          215 APINPYGKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       215 ~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                      ++...|+.||++.+.+++.++.+   +|+++++|+|.
T Consensus       154 ~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG  190 (271)
T 3tzq_B          154 DMSTAYACTKAAIETLTRYVATQYGRHGVRCNAIAPG  190 (271)
T ss_dssp             SSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred             CCChHHHHHHHHHHHHHHHHHHHHhhcCEEEEEEEeC
Confidence            45779999999999999999988   78999999994

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=99.96  E-value=1.2e-27  Score=200.49  Aligned_cols=165  Identities=13%  Similarity=0.044  Sum_probs=127.4

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~  144 (248)
                      +|++|||||+||||++++++|+++|++|++++|+..   ...+..+++...+.++.++.+|++|.+++++++++     +
T Consensus        24 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~---~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  100 (279)
T 3sju_A           24 PQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAK---NVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFG  100 (279)
T ss_dssp             -CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHH---HHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHH---HHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            389999999999999999999999999999997533   33333344434456799999999999999888875     6


Q ss_pred             CCCEEEEcccccccCCCCCCchhh----HhhhHHHHHHHHHH------HHHcCCCEEEEeccceecCCCCCCCCCCCCCC
Q 025786          145 AFDAVMHFAAVAYVGESTLDPLKY----YHNITSNTLVVLES------MARHGVDTLIYSSTCATYGEPEKMPITEETPQ  214 (248)
Q Consensus       145 ~iD~li~~Ag~~~~~~~~~~~~~~----~~~~~~~~~~ll~~------~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~  214 (248)
                      ++|+||||||+.......+.+.+.    ++.|+.++..+...      |.+++.++||++||..++.           +.
T Consensus       101 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~~-----------~~  169 (279)
T 3sju_A          101 PIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQ-----------GV  169 (279)
T ss_dssp             SCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGTS-----------CC
T ss_pred             CCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhhcc-----------CC
Confidence            899999999987554433333333    44666665554443      5556678999999987762           34


Q ss_pred             CCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          215 APINPYGKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       215 ~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                      ++...|+.||++.+.+++.++.+   +|+++++|+|.
T Consensus       170 ~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG  206 (279)
T 3sju_A          170 MYAAPYTASKHGVVGFTKSVGFELAKTGITVNAVCPG  206 (279)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEES
T ss_pred             CCChhHHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeC
Confidence            45778999999999999999988   58999999983

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=99.96  E-value=6e-28  Score=201.47  Aligned_cols=165  Identities=13%  Similarity=0.107  Sum_probs=128.4

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~  144 (248)
                      +|++|||||+||||++++++|+++|++|++++|+...   ..+..+++...+.++.++.+|++|.+++++++++     +
T Consensus        26 gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~---~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  102 (271)
T 4ibo_A           26 GRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSR---VAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQGI  102 (271)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHH---HHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH---HHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHCC
Confidence            4999999999999999999999999999998864433   3333333333345789999999999999988875     5


Q ss_pred             CCCEEEEcccccccCCCCCCchh----hHhhhHHHHHH----HHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCC
Q 025786          145 AFDAVMHFAAVAYVGESTLDPLK----YYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (248)
Q Consensus       145 ~iD~li~~Ag~~~~~~~~~~~~~----~~~~~~~~~~~----ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~  216 (248)
                      ++|+||||||+....+..+.+.+    .++.|+.++..    +++.|++++.++||++||...+           .+.++
T Consensus       103 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~-----------~~~~~  171 (271)
T 4ibo_A          103 DVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSE-----------LARAT  171 (271)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT-----------SBCTT
T ss_pred             CCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhC-----------CCCCC
Confidence            89999999998655443333333    34556555444    5777777777899999997765           23445


Q ss_pred             CChHHHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          217 INPYGKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                      ..+|+.||++.+.+++.++.+   +|+++++++|.
T Consensus       172 ~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG  206 (271)
T 4ibo_A          172 VAPYTVAKGGIKMLTRAMAAEWAQYGIQANAIGPG  206 (271)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred             chhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEec
Confidence            778999999999999999988   68999999983

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=99.96  E-value=2.7e-27  Score=195.95  Aligned_cols=163  Identities=15%  Similarity=0.164  Sum_probs=125.9

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      |++|||||+||||++++++|+++|++|++++|+..   ...+..+++...+.++.++++|++|++++++++++     ++
T Consensus         7 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   83 (257)
T 3imf_A            7 KVVIITGGSSGMGKGMATRFAKEGARVVITGRTKE---KLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFGR   83 (257)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHH---HHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHH---HHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            89999999999999999999999999999986533   33333444444456899999999999999988875     68


Q ss_pred             CCEEEEcccccccCCCCCCchh----hHhhhHHHHHH----HHHHHHH-cCCCEEEEeccceecCCCCCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYVGESTLDPLK----YYHNITSNTLV----VLESMAR-HGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (248)
Q Consensus       146 iD~li~~Ag~~~~~~~~~~~~~----~~~~~~~~~~~----ll~~~~~-~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~  216 (248)
                      +|+||||||+....+..+.+.+    .++.|+.++..    +++.|.+ .+.++||++||...+.           +.++
T Consensus        84 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~  152 (257)
T 3imf_A           84 IDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWD-----------AGPG  152 (257)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGS-----------CCTT
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhcc-----------CCCC
Confidence            9999999997654443333333    34555555444    5566633 4468999999987762           3445


Q ss_pred             CChHHHHHHHHHHHHHHHhhc----CCCcEEEEec
Q 025786          217 INPYGKAKKMAEDIILDFSKN----SDMAVLQCHR  247 (248)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~~~~----~gi~~~~v~P  247 (248)
                      ...|+.||++.+.+++.++.|    +|+++++|+|
T Consensus       153 ~~~Y~asKaa~~~l~~~la~e~~~~~gIrvn~v~P  187 (257)
T 3imf_A          153 VIHSAAAKAGVLAMTKTLAVEWGRKYGIRVNAIAP  187 (257)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEE
T ss_pred             cHHHHHHHHHHHHHHHHHHHHhccccCeEEEEEEE
Confidence            778999999999999999866    3899999999

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=99.95  E-value=9e-28  Score=206.43  Aligned_cols=172  Identities=26%  Similarity=0.396  Sum_probs=141.1

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHC--CCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCC
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKD--SYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFD  147 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD  147 (248)
                      ||+||||||+||||++++++|+++  |++|++++|......  .+.+..+.  ..++.++.+|++|.+++.++++  ++|
T Consensus         4 m~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~--~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~--~~d   77 (348)
T 1oc2_A            4 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGN--KANLEAIL--GDRVELVVGDIADAELVDKLAA--KAD   77 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCC--GGGTGGGC--SSSEEEEECCTTCHHHHHHHHT--TCS
T ss_pred             CcEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCC--hhHHhhhc--cCCeEEEECCCCCHHHHHHHhh--cCC
Confidence            589999999999999999999999  899999997542211  11122221  2478899999999999999997  579


Q ss_pred             EEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCCC------------CCCCCCCCCC
Q 025786          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEK------------MPITEETPQA  215 (248)
Q Consensus       148 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~------------~~~~e~~~~~  215 (248)
                      +||||||.........+++..++.|+.++.++++++.+.+. +||++||.++||....            .+++|+.+..
T Consensus        78 ~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~-~~v~~SS~~vyg~~~~~~~~~~~~~~~~~~~~E~~~~~  156 (348)
T 1oc2_A           78 AIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDI-RFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYN  156 (348)
T ss_dssp             EEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCC
T ss_pred             EEEECCcccCccchhhCHHHHHHHHHHHHHHHHHHHHHhCC-eEEEecccceeCCCcccccccccccccCCCcCCCCCCC
Confidence            99999997542222235567788999999999999998876 9999999999986532            5788888888


Q ss_pred             CCChHHHHHHHHHHHHHHHhhcCCCcEEEEecC
Q 025786          216 PINPYGKAKKMAEDIILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~~~~~gi~~~~v~Pf  248 (248)
                      +.+.|+.||.++|.+++.++.++|++++++||+
T Consensus       157 ~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilrp~  189 (348)
T 1oc2_A          157 PSSPYSSTKAASDLIVKAWVRSFGVKATISNCS  189 (348)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEEC
T ss_pred             CCCccHHHHHHHHHHHHHHHHHhCCCEEEEeec
Confidence            999999999999999999999899999999985

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=99.95  E-value=3.8e-27  Score=198.70  Aligned_cols=166  Identities=19%  Similarity=0.121  Sum_probs=127.9

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCC-CceEEEEccCCCHHHHHHHhhc-----
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEP-GRLQFIYADLGDAKAVNKFFSE-----  143 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~-----  143 (248)
                      +|++|||||+||||++++++|+++|++|++++|+....++   ..+++...+ .++.++++|++|.+++++++++     
T Consensus        41 ~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~---~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  117 (293)
T 3rih_A           41 ARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSS---VTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAF  117 (293)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHH---HHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHH---HHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHHc
Confidence            4999999999999999999999999999999976544333   333333222 5789999999999999888875     


Q ss_pred             CCCCEEEEcccccccCCCCCCchh----hHhhhHHHHHH----HHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCC
Q 025786          144 NAFDAVMHFAAVAYVGESTLDPLK----YYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (248)
Q Consensus       144 ~~iD~li~~Ag~~~~~~~~~~~~~----~~~~~~~~~~~----ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~  215 (248)
                      +++|+||||||+.......+.+.+    .++.|+.++..    +++.|++.+.++||++||...+.          .+.+
T Consensus       118 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~~~~~----------~~~~  187 (293)
T 3rih_A          118 GALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPV----------TGYP  187 (293)
T ss_dssp             SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSCEEEEECCSBTTT----------BBCT
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEeChhhcc----------CCCC
Confidence            689999999998765444333333    34556555544    55666777778999999976531          1234


Q ss_pred             CCChHHHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          216 PINPYGKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                      +...|+.||++.+.+++.++.+   +|+++++|+|.
T Consensus       188 ~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG  223 (293)
T 3rih_A          188 GWSHYGASKAAQLGFMRTAAIELAPRGVTVNAILPG  223 (293)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEEC
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEecC
Confidence            5679999999999999999988   58999999994

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.95  E-value=1e-27  Score=199.17  Aligned_cols=161  Identities=23%  Similarity=0.299  Sum_probs=139.1

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~l  149 (248)
                      ||+||||||+|+||++++++|+++|++|++++|+..+..            ..++.++.+|++|.+++.++++  ++|+|
T Consensus         2 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~------------~~~~~~~~~Dl~d~~~~~~~~~--~~d~v   67 (267)
T 3ay3_A            2 LNRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAA------------EAHEEIVACDLADAQAVHDLVK--DCDGI   67 (267)
T ss_dssp             EEEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCC------------CTTEEECCCCTTCHHHHHHHHT--TCSEE
T ss_pred             CceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCcccc------------CCCccEEEccCCCHHHHHHHHc--CCCEE
Confidence            479999999999999999999999999999987543210            1256889999999999999987  69999


Q ss_pred             EEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCC-CCCCCCCCCCCCCCChHHHHHHHHH
Q 025786          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEP-EKMPITEETPQAPINPYGKAKKMAE  228 (248)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~-~~~~~~e~~~~~~~~~Y~~sK~a~e  228 (248)
                      |||||...    .......++.|..++.++++++.+.+.++||++||..+|+.. ...+++|+.+..|.+.|+.||.++|
T Consensus        68 i~~a~~~~----~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e  143 (267)
T 3ay3_A           68 IHLGGVSV----ERPWNDILQANIIGAYNLYEAARNLGKPRIVFASSNHTIGYYPRTTRIDTEVPRRPDSLYGLSKCFGE  143 (267)
T ss_dssp             EECCSCCS----CCCHHHHHHHTHHHHHHHHHHHHHTTCCEEEEEEEGGGSTTSBTTSCBCTTSCCCCCSHHHHHHHHHH
T ss_pred             EECCcCCC----CCCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCHHHhCCCCCCCCCCCCCCCCCCChHHHHHHHHH
Confidence            99999752    234566788899999999999998888899999999999764 3467899999999999999999999


Q ss_pred             HHHHHHhhcCCCcEEEEecC
Q 025786          229 DIILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       229 ~l~~~~~~~~gi~~~~v~Pf  248 (248)
                      .+++.++.++|++++++||+
T Consensus       144 ~~~~~~~~~~gi~~~~lrp~  163 (267)
T 3ay3_A          144 DLASLYYHKFDIETLNIRIG  163 (267)
T ss_dssp             HHHHHHHHTTCCCEEEEEEC
T ss_pred             HHHHHHHHHcCCCEEEEece
Confidence            99999998899999999995

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=99.95  E-value=3.1e-27  Score=197.40  Aligned_cols=164  Identities=15%  Similarity=0.152  Sum_probs=127.4

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc----CC
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----NA  145 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~----~~  145 (248)
                      +|++|||||+||||++++++|+++|++|++++|..    ...+..+++...+.++.++.+|++|.++++++.+.    ++
T Consensus        31 gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~----~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~g~  106 (273)
T 3uf0_A           31 GRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTD----GVKEVADEIADGGGSAEAVVADLADLEGAANVAEELAATRR  106 (273)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESST----HHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHHHHHHSC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHH----HHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHhcCC
Confidence            39999999999999999999999999999998532    22333334434456789999999999999887543    68


Q ss_pred             CCEEEEcccccccCCCCCCchh----hHhhhHHHHH----HHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYVGESTLDPLK----YYHNITSNTL----VVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (248)
Q Consensus       146 iD~li~~Ag~~~~~~~~~~~~~----~~~~~~~~~~----~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (248)
                      +|+||||||+....+..+.+.+    .++.|+.++.    .+++.|++++.++||++||...+.           +.++.
T Consensus       107 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~-----------~~~~~  175 (273)
T 3uf0_A          107 VDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQ-----------GGRNV  175 (273)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS-----------CCSSC
T ss_pred             CcEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchHhcC-----------CCCCC
Confidence            9999999998765443333333    3445555544    456677777778999999988762           34457


Q ss_pred             ChHHHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          218 NPYGKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                      ..|+.||++.+.+++.++.+   .|+++++|+|.
T Consensus       176 ~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG  209 (273)
T 3uf0_A          176 AAYAASKHAVVGLTRALASEWAGRGVGVNALAPG  209 (273)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred             hhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeC
Confidence            79999999999999999988   68999999993

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=99.95  E-value=4e-27  Score=201.80  Aligned_cols=164  Identities=13%  Similarity=0.062  Sum_probs=132.2

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~l  149 (248)
                      +|+||||||+|+||++++++|+++|++|++++|+..+.+.+    .     ..++.++.+|++|.+++.++++  ++|+|
T Consensus        13 ~M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l----~-----~~~~~~~~~Dl~d~~~~~~~~~--~~d~v   81 (342)
T 2x4g_A           13 HVKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRL----A-----YLEPECRVAEMLDHAGLERALR--GLDGV   81 (342)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGG----G-----GGCCEEEECCTTCHHHHHHHTT--TCSEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhh----c-----cCCeEEEEecCCCHHHHHHHHc--CCCEE
Confidence            36899999999999999999999999999999865432211    1     1257889999999999999987  69999


Q ss_pred             EEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCCC--CCCCCCCCCCC----CChHHHH
Q 025786          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEK--MPITEETPQAP----INPYGKA  223 (248)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~--~~~~e~~~~~~----~~~Y~~s  223 (248)
                      ||+||...  ....+..+.++.|+.++.++++++.+.+.++||++||.++|+....  .+ +|+.+..|    .+.|+.|
T Consensus        82 ih~a~~~~--~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~-~E~~~~~p~~~~~~~Y~~s  158 (342)
T 2x4g_A           82 IFSAGYYP--SRPRRWQEEVASALGQTNPFYAACLQARVPRILYVGSAYAMPRHPQGLPG-HEGLFYDSLPSGKSSYVLC  158 (342)
T ss_dssp             EEC--------------CHHHHHHHHHHHHHHHHHHHTCSCEEEECCGGGSCCCTTSSCB-CTTCCCSSCCTTSCHHHHH
T ss_pred             EECCccCc--CCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHhhCcCCCCCCC-CCCCCCCccccccChHHHH
Confidence            99999653  2234566788899999999999999988889999999999986544  44 88888888    8899999


Q ss_pred             HHHHHHHHHHHhhcCCCcEEEEecC
Q 025786          224 KKMAEDIILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       224 K~a~e~l~~~~~~~~gi~~~~v~Pf  248 (248)
                      |.++|.+++.++.+ |++++++||.
T Consensus       159 K~~~e~~~~~~~~~-g~~~~ilrp~  182 (342)
T 2x4g_A          159 KWALDEQAREQARN-GLPVVIGIPG  182 (342)
T ss_dssp             HHHHHHHHHHHHHT-TCCEEEEEEC
T ss_pred             HHHHHHHHHHHhhc-CCcEEEEeCC
Confidence            99999999999987 9999999995

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=99.95  E-value=2.4e-27  Score=196.79  Aligned_cols=165  Identities=15%  Similarity=0.127  Sum_probs=125.4

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      |++|||||+||||++++++|+++|++|++++|+..+.++..+.++...  +.++.++++|++|.+++++++++     ++
T Consensus         8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   85 (263)
T 3ai3_A            8 KVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKF--GVRVLEVAVDVATPEGVDAVVESVRSSFGG   85 (263)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH--CCCEEEEECCTTSHHHHHHHHHHHHHHHSS
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            899999999999999999999999999999975432222222222110  34688999999999999988875     58


Q ss_pred             CCEEEEcccccccCCCCCCchh----hHhhhHHHH----HHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYVGESTLDPLK----YYHNITSNT----LVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (248)
Q Consensus       146 iD~li~~Ag~~~~~~~~~~~~~----~~~~~~~~~----~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (248)
                      +|+||||||+....+..+.+.+    .++.|+.++    +.+++.|++++.++||++||..++.           +.++.
T Consensus        86 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~~  154 (263)
T 3ai3_A           86 ADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICAVQ-----------PLWYE  154 (263)
T ss_dssp             CSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS-----------CCTTC
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcC-----------CCCCc
Confidence            9999999998654443333333    344555554    3466667677778999999988873           23446


Q ss_pred             ChHHHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          218 NPYGKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                      ..|+.||++.+.+++.++.+   +|+++++++|.
T Consensus       155 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg  188 (263)
T 3ai3_A          155 PIYNVTKAALMMFSKTLATEVIKDNIRVNCINPG  188 (263)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred             chHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecC
Confidence            78999999999999999987   68999999994

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=99.95  E-value=2.3e-27  Score=198.60  Aligned_cols=162  Identities=19%  Similarity=0.212  Sum_probs=127.6

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~  144 (248)
                      +|++|||||+||||++++++|+++|++|++++|+.   +.+.+..+++   +.++.++++|++|.+++++++++     +
T Consensus        27 ~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~---~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  100 (277)
T 4dqx_A           27 QRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNE---DAAVRVANEI---GSKAFGVRVDVSSAKDAESMVEKTTAKWG  100 (277)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSH---HHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH---HHHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            39999999999999999999999999999999643   2333333333   35788999999999999988875     6


Q ss_pred             CCCEEEEcccccccCCCCCCchhhHh----hhHHHHH----HHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCC
Q 025786          145 AFDAVMHFAAVAYVGESTLDPLKYYH----NITSNTL----VVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (248)
Q Consensus       145 ~iD~li~~Ag~~~~~~~~~~~~~~~~----~~~~~~~----~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~  216 (248)
                      ++|+||||||+.......+.+.+.|+    .|+.++.    .+++.|++++.++||++||..++.           +.++
T Consensus       101 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~  169 (277)
T 4dqx_A          101 RVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATS-----------AIAD  169 (277)
T ss_dssp             CCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGTS-----------CCTT
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhCc-----------CCCC
Confidence            89999999998765554444444444    5555544    466677777778999999988762           3455


Q ss_pred             CChHHHHHHHHHHHHHHHhhcC---CCcEEEEecC
Q 025786          217 INPYGKAKKMAEDIILDFSKNS---DMAVLQCHRF  248 (248)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~~~~~---gi~~~~v~Pf  248 (248)
                      ...|+.||++.+.+++.++.++   |+++++++|.
T Consensus       170 ~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG  204 (277)
T 4dqx_A          170 RTAYVASKGAISSLTRAMAMDHAKEGIRVNAVAPG  204 (277)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred             ChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeC
Confidence            7799999999999999999884   8999999993

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=99.95  E-value=4.2e-27  Score=203.70  Aligned_cols=169  Identities=23%  Similarity=0.379  Sum_probs=139.1

Q ss_pred             ceEEEEecCCchhHHHHHHHHHH--CCCEEEEEecCCCCcc-------hhhhhhhhhcCCCCceEEEEccCCCHHHHHHH
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLK--DSYRVTIVDNLSRGNI-------GAVKVLQELFPEPGRLQFIYADLGDAKAVNKF  140 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~--~G~~V~~~~r~~~~~~-------~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~  140 (248)
                      +|+||||||+||||++++++|++  +|++|++++|......       .... ....  ...++.++.+|++|.+++.++
T Consensus        10 ~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~Dl~d~~~~~~~   86 (362)
T 3sxp_A           10 NQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGH-FKNL--IGFKGEVIAADINNPLDLRRL   86 (362)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCC-GGGG--TTCCSEEEECCTTCHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhh-hhhc--cccCceEEECCCCCHHHHHHh
Confidence            48999999999999999999999  9999999998654110       0011 1111  134678999999999999988


Q ss_pred             hhcCCCCEEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCCChH
Q 025786          141 FSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPY  220 (248)
Q Consensus       141 ~~~~~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y  220 (248)
                       ...++|+||||||....  ...+++..++.|+.++.++++++++.+.+ ||++||.++||.... +++|+.+..|.++|
T Consensus        87 -~~~~~D~vih~A~~~~~--~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~-~V~~SS~~vyg~~~~-~~~E~~~~~p~~~Y  161 (362)
T 3sxp_A           87 -EKLHFDYLFHQAAVSDT--TMLNQELVMKTNYQAFLNLLEIARSKKAK-VIYASSAGVYGNTKA-PNVVGKNESPENVY  161 (362)
T ss_dssp             -TTSCCSEEEECCCCCGG--GCCCHHHHHHHHTHHHHHHHHHHHHTTCE-EEEEEEGGGGCSCCS-SBCTTSCCCCSSHH
T ss_pred             -hccCCCEEEECCccCCc--cccCHHHHHHHHHHHHHHHHHHHHHcCCc-EEEeCcHHHhCCCCC-CCCCCCCCCCCChh
Confidence             22479999999996532  34567788899999999999999888764 999999999987766 89999999999999


Q ss_pred             HHHHHHHHHHHHHHhhcCCCcEEEEecC
Q 025786          221 GKAKKMAEDIILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       221 ~~sK~a~e~l~~~~~~~~gi~~~~v~Pf  248 (248)
                      +.||.++|.+++.++.+  ++++++||+
T Consensus       162 ~~sK~~~E~~~~~~~~~--~~~~~lR~~  187 (362)
T 3sxp_A          162 GFSKLCMDEFVLSHSND--NVQVGLRYF  187 (362)
T ss_dssp             HHHHHHHHHHHHHTTTT--SCEEEEEEC
T ss_pred             HHHHHHHHHHHHHHhcc--CCEEEEEeC
Confidence            99999999999999887  889999984

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=99.95  E-value=1.3e-27  Score=198.86  Aligned_cols=167  Identities=19%  Similarity=0.211  Sum_probs=130.2

Q ss_pred             CCceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-CCC
Q 025786           68 EGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-NAF  146 (248)
Q Consensus        68 ~~~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-~~i  146 (248)
                      .+ |++|||||+||||++++++|+++|++|++++|+....++..+.+.... ....+.++.+|++|.+++++++++ +++
T Consensus         9 ~~-k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~g~i   86 (267)
T 3t4x_A            9 KG-KTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQY-PDAILQPVVADLGTEQGCQDVIEKYPKV   86 (267)
T ss_dssp             TT-CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHC-TTCEEEEEECCTTSHHHHHHHHHHCCCC
T ss_pred             CC-CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhC-CCceEEEEecCCCCHHHHHHHHHhcCCC
Confidence            44 999999999999999999999999999999975443333333333321 134678899999999999999877 689


Q ss_pred             CEEEEcccccccCCCCCCchhh----HhhhHHH----HHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCCC
Q 025786          147 DAVMHFAAVAYVGESTLDPLKY----YHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPIN  218 (248)
Q Consensus       147 D~li~~Ag~~~~~~~~~~~~~~----~~~~~~~----~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~  218 (248)
                      |+||||||+.......+.+.+.    ++.|+.+    ++.+++.|++++.++||++||...+           .+.++..
T Consensus        87 d~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~-----------~~~~~~~  155 (267)
T 3t4x_A           87 DILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAI-----------MPSQEMA  155 (267)
T ss_dssp             SEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGGT-----------SCCTTCH
T ss_pred             CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhhc-----------cCCCcch
Confidence            9999999987654444433444    4555555    4556788887777899999998876           2445578


Q ss_pred             hHHHHHHHHHHHHHHHhhcC---CCcEEEEec
Q 025786          219 PYGKAKKMAEDIILDFSKNS---DMAVLQCHR  247 (248)
Q Consensus       219 ~Y~~sK~a~e~l~~~~~~~~---gi~~~~v~P  247 (248)
                      .|+.||++.+.+++.++.++   |+++++++|
T Consensus       156 ~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~P  187 (267)
T 3t4x_A          156 HYSATKTMQLSLSRSLAELTTGTNVTVNTIMP  187 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEE
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeC
Confidence            99999999999999999885   699999998

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.95  E-value=2.9e-27  Score=196.54  Aligned_cols=165  Identities=13%  Similarity=0.093  Sum_probs=126.0

Q ss_pred             CCceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc----
Q 025786           68 EGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----  143 (248)
Q Consensus        68 ~~~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~----  143 (248)
                      .+ |++|||||++|||++++++|+++|++|++++|+....   .+..+++...+.++.++++|++|.+++++++++    
T Consensus        10 ~~-k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~---~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   85 (264)
T 3ucx_A           10 TD-KVVVISGVGPALGTTLARRCAEQGADLVLAARTVERL---EDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKA   85 (264)
T ss_dssp             TT-CEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHH---HHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CC-cEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHH---HHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            44 9999999999999999999999999999999754333   333333323356799999999999999988875    


Q ss_pred             -CCCCEEEEcccccc-cCCCCCCchh----hHhhhHHHHHH----HHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCC
Q 025786          144 -NAFDAVMHFAAVAY-VGESTLDPLK----YYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETP  213 (248)
Q Consensus       144 -~~iD~li~~Ag~~~-~~~~~~~~~~----~~~~~~~~~~~----ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~  213 (248)
                       +++|+||||||... ..+..+.+.+    .++.|+.++..    +++.|.+.+ ++||++||...+.           +
T Consensus        86 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~-----------~  153 (264)
T 3ucx_A           86 YGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESK-GAVVNVNSMVVRH-----------S  153 (264)
T ss_dssp             TSCCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHT-CEEEEECCGGGGC-----------C
T ss_pred             cCCCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEECcchhcc-----------C
Confidence             68999999998752 2332233333    34455555444    556666655 7999999987762           3


Q ss_pred             CCCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          214 QAPINPYGKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       214 ~~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                      .++...|+.||++.+.+++.++.+   +|+++++++|.
T Consensus       154 ~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG  191 (264)
T 3ucx_A          154 QAKYGAYKMAKSALLAMSQTLATELGEKGIRVNSVLPG  191 (264)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEES
T ss_pred             CCccHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecC
Confidence            445779999999999999999988   78999999993

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=99.95  E-value=4.1e-27  Score=197.60  Aligned_cols=166  Identities=16%  Similarity=0.145  Sum_probs=128.2

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~  144 (248)
                      +|++|||||+||||++++++|+++|++|++++|+.   +.+.+..+++...+.++.++++|++|++++++++++     +
T Consensus        28 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~---~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  104 (283)
T 3v8b_A           28 SPVALITGAGSGIGRATALALAADGVTVGALGRTR---TEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLKFG  104 (283)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSH---HHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH---HHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            38999999999999999999999999999999653   333344444444456889999999999999988876     6


Q ss_pred             CCCEEEEccccccc-CCCCCCchh----hHhhhHHHHH----HHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCC
Q 025786          145 AFDAVMHFAAVAYV-GESTLDPLK----YYHNITSNTL----VVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (248)
Q Consensus       145 ~iD~li~~Ag~~~~-~~~~~~~~~----~~~~~~~~~~----~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~  215 (248)
                      ++|+||||||+... .+..+.+.+    .++.|+.++.    .+++.|++++.++||++||.+++..         .+.+
T Consensus       105 ~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~---------~~~~  175 (283)
T 3v8b_A          105 HLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRT---------FTTP  175 (283)
T ss_dssp             CCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTB---------CCST
T ss_pred             CCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCceEEEEcChhhccC---------CCCC
Confidence            89999999998543 333333333    3455555544    4666677777789999999776521         1334


Q ss_pred             CCChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          216 PINPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      +...|+.||++.+.+++.++.+   .|+++++|+|
T Consensus       176 ~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~P  210 (283)
T 3v8b_A          176 GATAYTATKAAQVAIVQQLALELGKHHIRVNAVCP  210 (283)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEE
T ss_pred             CchHHHHHHHHHHHHHHHHHHHhCccCcEEEEEEe
Confidence            5778999999999999999988   5799999998

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=99.95  E-value=1.8e-27  Score=197.89  Aligned_cols=167  Identities=15%  Similarity=0.093  Sum_probs=127.2

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~  144 (248)
                      +|++|||||++|||++++++|+++|++|++++|+....++..+.+.... ...++.++.+|++|.+++++++++     +
T Consensus         8 ~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   86 (265)
T 3lf2_A            8 EAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRF-PGARLFASVCDVLDALQVRAFAEACERTLG   86 (265)
T ss_dssp             TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHS-TTCCEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc-CCceEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            3999999999999999999999999999999975433333333333211 123588999999999999988875     6


Q ss_pred             CCCEEEEcccccccCCCCCCchhh----HhhhHHHHHH----HHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCC
Q 025786          145 AFDAVMHFAAVAYVGESTLDPLKY----YHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (248)
Q Consensus       145 ~iD~li~~Ag~~~~~~~~~~~~~~----~~~~~~~~~~----ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~  216 (248)
                      ++|+||||||+.......+.+.+.    ++.|+.++..    +++.|++++.++||++||...+.           +.++
T Consensus        87 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~  155 (265)
T 3lf2_A           87 CASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQ-----------PEPH  155 (265)
T ss_dssp             SCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGTS-----------CCTT
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccCC-----------CCCC
Confidence            899999999986554444444333    4455555444    56666666678999999987762           3445


Q ss_pred             CChHHHHHHHHHHHHHHHhhcC---CCcEEEEecC
Q 025786          217 INPYGKAKKMAEDIILDFSKNS---DMAVLQCHRF  248 (248)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~~~~~---gi~~~~v~Pf  248 (248)
                      ...|+.||++.+.+++.++.++   |+++++|+|-
T Consensus       156 ~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG  190 (265)
T 3lf2_A          156 MVATSAARAGVKNLVRSMAFEFAPKGVRVNGILIG  190 (265)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred             chhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeC
Confidence            7799999999999999999884   8999999983

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=99.95  E-value=1.8e-27  Score=198.01  Aligned_cols=163  Identities=16%  Similarity=0.089  Sum_probs=122.6

Q ss_pred             CceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----
Q 025786           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (248)
Q Consensus        69 ~~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----  143 (248)
                      .+|++|||||+||||++++++|+++|++|++++|+.   +.+.+..++.   +.++.++.+|++|.+++++++++     
T Consensus        26 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~---~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   99 (266)
T 3grp_A           26 TGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTRE---DKLKEIAADL---GKDVFVFSANLSDRKSIKQLAEVAEREM   99 (266)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCH---HHHHHHHHHH---CSSEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCH---HHHHHHHHHh---CCceEEEEeecCCHHHHHHHHHHHHHHc
Confidence            349999999999999999999999999999998643   3333333333   35789999999999999988875     


Q ss_pred             CCCCEEEEcccccccCCCCCCchhh----HhhhHHH----HHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCC
Q 025786          144 NAFDAVMHFAAVAYVGESTLDPLKY----YHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (248)
Q Consensus       144 ~~iD~li~~Ag~~~~~~~~~~~~~~----~~~~~~~----~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~  215 (248)
                      +++|+||||||+.......+.+.+.    ++.|+.+    ++.+++.|++++.++||++||...+.           +.+
T Consensus       100 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~~~-----------~~~  168 (266)
T 3grp_A          100 EGIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVV-----------GNP  168 (266)
T ss_dssp             TSCCEEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC------------------
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHHcC-----------CCC
Confidence            6899999999987554444333333    4456555    55678888888778999999977652           334


Q ss_pred             CCChHHHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          216 PINPYGKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                      +...|+.||++.+.+++.++.+   .|+++++|+|.
T Consensus       169 ~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG  204 (266)
T 3grp_A          169 GQTNYCAAKAGLIGFSKALAQEIASRNITVNCIAPG  204 (266)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred             CchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeC
Confidence            5678999999999999999987   48999999983

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=99.95  E-value=4.8e-27  Score=193.34  Aligned_cols=162  Identities=15%  Similarity=0.151  Sum_probs=124.3

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      |+++||||+||||++++++|+++|++|++++|+...   +.+..+++...+.++.++.+|++|++++++++++     ++
T Consensus         8 k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~---~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~   84 (247)
T 2jah_A            8 KVALITGASSGIGEATARALAAEGAAVAIAARRVEK---LRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEALGG   84 (247)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHH---HHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHH---HHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            899999999999999999999999999999875432   2222222222245788999999999999988875     68


Q ss_pred             CCEEEEcccccccCCCCCCchh----hHhhhHHHHHH----HHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYVGESTLDPLK----YYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (248)
Q Consensus       146 iD~li~~Ag~~~~~~~~~~~~~----~~~~~~~~~~~----ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (248)
                      +|+||||||+....+..+.+.+    .++.|+.++..    +++.|++++ ++||++||.+++.           +.++.
T Consensus        85 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~-----------~~~~~  152 (247)
T 2jah_A           85 LDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK-GTVVQMSSIAGRV-----------NVRNA  152 (247)
T ss_dssp             CSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTC-----------CCTTC
T ss_pred             CCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CEEEEEccHHhcC-----------CCCCC
Confidence            9999999998654443333333    34455555443    566676666 8999999987762           33456


Q ss_pred             ChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          218 NPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      ..|+.||++.+.+++.++.+   +|+++++|+|
T Consensus       153 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~P  185 (247)
T 2jah_A          153 AVYQATKFGVNAFSETLRQEVTERGVRVVVIEP  185 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEE
T ss_pred             cHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEC
Confidence            78999999999999999987   5899999998

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=99.95  E-value=1.2e-27  Score=206.60  Aligned_cols=175  Identities=26%  Similarity=0.412  Sum_probs=140.9

Q ss_pred             eEEEEecCCchhHHHHHHHHHHC-CCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKD-SYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~l  149 (248)
                      |+||||||+||||++++++|+++ |++|++++|...... . +.+.++. ...++.++.+|++|.+++.+++++.++|+|
T Consensus         1 MkvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-~-~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~v   77 (361)
T 1kew_A            1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGN-L-ESLSDIS-ESNRYNFEHADICDSAEITRIFEQYQPDAV   77 (361)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCC-G-GGGTTTT-TCTTEEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred             CEEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCc-h-hhhhhhh-cCCCeEEEECCCCCHHHHHHHHhhcCCCEE
Confidence            36999999999999999999998 799999987542111 1 1112221 134788999999999999999976679999


Q ss_pred             EEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHc--CCC-------EEEEeccceecCCCCC--C--------CCCC
Q 025786          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARH--GVD-------TLIYSSTCATYGEPEK--M--------PITE  210 (248)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~--~~~-------~iV~~SS~~~~g~~~~--~--------~~~e  210 (248)
                      |||||.........+++..++.|+.++.++++++.+.  +.+       +||++||.++||....  .        +++|
T Consensus        78 ih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~~~~~~~E  157 (361)
T 1kew_A           78 MHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTE  157 (361)
T ss_dssp             EECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCT
T ss_pred             EECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCcccccccccccCCCCCC
Confidence            9999975422222355677889999999999999887  655       9999999999986532  1        6888


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHhhcCCCcEEEEecC
Q 025786          211 ETPQAPINPYGKAKKMAEDIILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       211 ~~~~~~~~~Y~~sK~a~e~l~~~~~~~~gi~~~~v~Pf  248 (248)
                      +.+..+.+.|+.||.++|.+++.++.++|++++++||+
T Consensus       158 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~vrp~  195 (361)
T 1kew_A          158 TTAYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCS  195 (361)
T ss_dssp             TSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEEC
T ss_pred             CCCCCCCCccHHHHHHHHHHHHHHHHHhCCcEEEEeec
Confidence            88888999999999999999999999999999999995

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.95  E-value=2.2e-27  Score=197.67  Aligned_cols=164  Identities=16%  Similarity=0.137  Sum_probs=123.9

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhh-hhhcCCCCceEEEEccCCCHHHHHHHhhc-----
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVL-QELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----  143 (248)
                      +|++|||||+||||++++++|+++|++|++++|+....++..+.+ +..   +.++.++.+|++|.+++++++++     
T Consensus        21 ~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   97 (267)
T 1vl8_A           21 GRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKY---GVETMAFRCDVSNYEEVKKLLEAVKEKF   97 (267)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH---CCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc---CCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            399999999999999999999999999999997543222222222 111   34688899999999999888875     


Q ss_pred             CCCCEEEEcccccccCCCCCCchh----hHhhhHHHHHH----HHHHHHHcCCCEEEEeccce-ecCCCCCCCCCCCCCC
Q 025786          144 NAFDAVMHFAAVAYVGESTLDPLK----YYHNITSNTLV----VLESMARHGVDTLIYSSTCA-TYGEPEKMPITEETPQ  214 (248)
Q Consensus       144 ~~iD~li~~Ag~~~~~~~~~~~~~----~~~~~~~~~~~----ll~~~~~~~~~~iV~~SS~~-~~g~~~~~~~~e~~~~  214 (248)
                      +++|+||||||+.......+.+.+    .++.|+.++..    +++.|++++.++||++||.+ .+           .+.
T Consensus        98 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~-----------~~~  166 (267)
T 1vl8_A           98 GKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEE-----------VTM  166 (267)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTC-----------CCS
T ss_pred             CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcchhc-----------cCC
Confidence            689999999998654433333333    34456555544    56666666778999999976 43           233


Q ss_pred             CCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          215 APINPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       215 ~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      ++...|+.||++.+.+++.++.+   +|+++++|+|
T Consensus       167 ~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~P  202 (267)
T 1vl8_A          167 PNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAP  202 (267)
T ss_dssp             SSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEE
T ss_pred             CCChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEe
Confidence            45678999999999999999987   5899999998

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=99.95  E-value=1.6e-27  Score=196.30  Aligned_cols=161  Identities=14%  Similarity=0.099  Sum_probs=125.0

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~  144 (248)
                      +|+++||||+||||++++++|+++|++|++++|+...   ..+..+++   ..+..++++|++|++++++++++     +
T Consensus         9 gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~---~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   82 (248)
T 3op4_A            9 GKVALVTGASRGIGKAIAELLAERGAKVIGTATSESG---AQAISDYL---GDNGKGMALNVTNPESIEAVLKAITDEFG   82 (248)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHH---HHHHHHHH---GGGEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHH---HHHHHHHh---cccceEEEEeCCCHHHHHHHHHHHHHHcC
Confidence            3999999999999999999999999999999865332   22333333   23577899999999999988875     6


Q ss_pred             CCCEEEEcccccccCCCCCCchh----hHhhhHHHHH----HHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCC
Q 025786          145 AFDAVMHFAAVAYVGESTLDPLK----YYHNITSNTL----VVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (248)
Q Consensus       145 ~iD~li~~Ag~~~~~~~~~~~~~----~~~~~~~~~~----~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~  216 (248)
                      ++|+||||||+.......+.+.+    .++.|+.++.    .+++.|++++.++||++||...+.           +.++
T Consensus        83 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~-----------~~~~  151 (248)
T 3op4_A           83 GVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTM-----------GNAG  151 (248)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH-----------CCTT
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcC-----------CCCC
Confidence            89999999998755443333333    3445555544    466667777778999999977662           3445


Q ss_pred             CChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          217 INPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      ...|+.||++.+.+++.++.+   +|+++++++|
T Consensus       152 ~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~P  185 (248)
T 3op4_A          152 QANYAAAKAGVIGFTKSMAREVASRGVTVNTVAP  185 (248)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEee
Confidence            779999999999999999987   5899999998

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=99.95  E-value=1.2e-27  Score=201.03  Aligned_cols=167  Identities=19%  Similarity=0.181  Sum_probs=127.3

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcch----hhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc---
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIG----AVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE---  143 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~----~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~---  143 (248)
                      |+++||||++|||++++++|+++|++|++++|+..+.++    +.+..+++...+.++.++++|++|.+++++++++   
T Consensus        10 k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   89 (285)
T 3sc4_A           10 KTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAVAKTVE   89 (285)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            999999999999999999999999999999987654322    2222222222245789999999999999988875   


Q ss_pred             --CCCCEEEEcccccccCCCCCCchhhHh----hhHHHHHHHHH----HHHHcCCCEEEEeccceecCCCCCCCCCCCCC
Q 025786          144 --NAFDAVMHFAAVAYVGESTLDPLKYYH----NITSNTLVVLE----SMARHGVDTLIYSSTCATYGEPEKMPITEETP  213 (248)
Q Consensus       144 --~~iD~li~~Ag~~~~~~~~~~~~~~~~----~~~~~~~~ll~----~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~  213 (248)
                        +++|+||||||+.......+.+.+.|+    .|+.++..+..    .|++++.++||++||...+..          .
T Consensus        90 ~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~----------~  159 (285)
T 3sc4_A           90 QFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEP----------K  159 (285)
T ss_dssp             HHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCCSG----------G
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhccC----------C
Confidence              689999999998765554444444444    56666555444    445556789999999776521          1


Q ss_pred             CCCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          214 QAPINPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       214 ~~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      ..+...|+.||++.+.+++.++.+   +||++++|+|
T Consensus       160 ~~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~P  196 (285)
T 3sc4_A          160 WLRPTPYMMAKYGMTLCALGIAEELRDAGIASNTLWP  196 (285)
T ss_dssp             GSCSHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEEC
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeC
Confidence            134578999999999999999988   5899999998

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=99.95  E-value=2.9e-27  Score=197.91  Aligned_cols=162  Identities=15%  Similarity=0.060  Sum_probs=127.3

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~  144 (248)
                      +|++|||||+||||++++++|+++|++|++++|+.   +.+.+..+++   +.++.++++|++|++++++++++     +
T Consensus        29 gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~---~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  102 (277)
T 3gvc_A           29 GKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDG---DAADAAATKI---GCGAAACRVDVSDEQQIIAMVDACVAAFG  102 (277)
T ss_dssp             TCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSH---HHHHHHHHHH---CSSCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH---HHHHHHHHHc---CCcceEEEecCCCHHHHHHHHHHHHHHcC
Confidence            49999999999999999999999999999999643   2333333333   35788999999999999888875     6


Q ss_pred             CCCEEEEcccccccCCCCCCchh----hHhhhHHHH----HHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCC
Q 025786          145 AFDAVMHFAAVAYVGESTLDPLK----YYHNITSNT----LVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (248)
Q Consensus       145 ~iD~li~~Ag~~~~~~~~~~~~~----~~~~~~~~~----~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~  216 (248)
                      ++|+||||||+.......+.+.+    .++.|+.++    +.+++.|++++.++||++||...+.           +.++
T Consensus       103 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~-----------~~~~  171 (277)
T 3gvc_A          103 GVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQV-----------AVGG  171 (277)
T ss_dssp             SCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTS-----------CCTT
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcc-----------CCCC
Confidence            89999999998755444333333    344555553    4466777777778999999987762           3445


Q ss_pred             CChHHHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          217 INPYGKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                      ...|+.||++.+.+++.++.+   +|+++++|+|.
T Consensus       172 ~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG  206 (277)
T 3gvc_A          172 TGAYGMSKAGIIQLSRITAAELRSSGIRSNTLLPA  206 (277)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred             chhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeC
Confidence            779999999999999999987   68999999994

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=99.95  E-value=7.8e-28  Score=201.28  Aligned_cols=173  Identities=16%  Similarity=0.133  Sum_probs=128.6

Q ss_pred             CCceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCC---------CcchhhhhhhhhcCCCCceEEEEccCCCHHHHH
Q 025786           68 EGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSR---------GNIGAVKVLQELFPEPGRLQFIYADLGDAKAVN  138 (248)
Q Consensus        68 ~~~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~---------~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~  138 (248)
                      .+ |++|||||+||||++++++|+++|++|++++|+..         ..+.+.+..+.+...+.++.++++|++|+++++
T Consensus        12 ~g-k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   90 (278)
T 3sx2_A           12 TG-KVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESLS   90 (278)
T ss_dssp             TT-CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHH
T ss_pred             CC-CEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHH
Confidence            44 99999999999999999999999999999997521         122222222222222467999999999999999


Q ss_pred             HHhhc-----CCCCEEEEcccccccCCCCCCchhhHhhhHHHHHH----HHHHHHHcC-CCEEEEeccceecCCCCCCCC
Q 025786          139 KFFSE-----NAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLV----VLESMARHG-VDTLIYSSTCATYGEPEKMPI  208 (248)
Q Consensus       139 ~~~~~-----~~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~----ll~~~~~~~-~~~iV~~SS~~~~g~~~~~~~  208 (248)
                      +++++     +++|+||||||+.......++.+..++.|+.++..    +++.|.+++ .++||++||.+.+....    
T Consensus        91 ~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----  166 (278)
T 3sx2_A           91 AALQAGLDELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVG----  166 (278)
T ss_dssp             HHHHHHHHHHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCC----
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHhcCCCc----
Confidence            88875     68999999999865443333444556666666544    566666654 57999999987763211    


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          209 TEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       209 ~e~~~~~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                         .+.++...|+.||++.+.+++.++.+   .||++++|+|.
T Consensus       167 ---~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG  206 (278)
T 3sx2_A          167 ---SADPGSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPS  206 (278)
T ss_dssp             ---CSSHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEES
T ss_pred             ---cCCCCchHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecC
Confidence               12234568999999999999999987   46999999994

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=99.95  E-value=3.1e-27  Score=196.60  Aligned_cols=166  Identities=16%  Similarity=0.161  Sum_probs=125.9

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      |+++||||+||||++++++|+++|++|++++|+..+.++..+.+.+.. .+.++.++.+|++|.+++++++++     ++
T Consensus        14 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   92 (267)
T 1iy8_A           14 RVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETA-PDAEVLTTVADVSDEAQVEAYVTATTERFGR   92 (267)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHC-TTCCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhc-CCceEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            899999999999999999999999999999975433222222222221 134688999999999999988875     68


Q ss_pred             CCEEEEccccccc-CCCCCCchh----hHhhhHHH----HHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYV-GESTLDPLK----YYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (248)
Q Consensus       146 iD~li~~Ag~~~~-~~~~~~~~~----~~~~~~~~----~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~  216 (248)
                      +|+||||||+... .+..+.+.+    .++.|+.+    ++.+++.|++++.++||++||..++.           +.++
T Consensus        93 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~  161 (267)
T 1iy8_A           93 IDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIR-----------GIGN  161 (267)
T ss_dssp             CSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTS-----------BCSS
T ss_pred             CCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcc-----------CCCC
Confidence            9999999997643 332222333    34455544    34578888887778999999987752           2344


Q ss_pred             CChHHHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          217 INPYGKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                      ...|+.||++.+.+++.++.+   +|+++++|+|.
T Consensus       162 ~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG  196 (267)
T 1iy8_A          162 QSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPG  196 (267)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEEC
T ss_pred             CccHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEeC
Confidence            678999999999999999987   58999999993

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=99.95  E-value=3.4e-27  Score=195.56  Aligned_cols=162  Identities=16%  Similarity=0.100  Sum_probs=125.2

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~  144 (248)
                      +|++|||||+||||++++++|+++|++|++++|+.   +.+.+..+++   ..++.++++|++|++++++++++     +
T Consensus         8 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~---~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   81 (259)
T 4e6p_A            8 GKSALITGSARGIGRAFAEAYVREGATVAIADIDI---ERARQAAAEI---GPAAYAVQMDVTRQDSIDAAIAATVEHAG   81 (259)
T ss_dssp             TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCH---HHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHHHSS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH---HHHHHHHHHh---CCCceEEEeeCCCHHHHHHHHHHHHHHcC
Confidence            38999999999999999999999999999998643   3333333443   34688999999999999888875     5


Q ss_pred             CCCEEEEcccccccCCCCCCchhh----HhhhHHHHHH----HHHHHHHcC-CCEEEEeccceecCCCCCCCCCCCCCCC
Q 025786          145 AFDAVMHFAAVAYVGESTLDPLKY----YHNITSNTLV----VLESMARHG-VDTLIYSSTCATYGEPEKMPITEETPQA  215 (248)
Q Consensus       145 ~iD~li~~Ag~~~~~~~~~~~~~~----~~~~~~~~~~----ll~~~~~~~-~~~iV~~SS~~~~g~~~~~~~~e~~~~~  215 (248)
                      ++|+||||||+....+..+.+.+.    ++.|+.++.+    +++.|.+++ .++||++||..++.           +.+
T Consensus        82 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~  150 (259)
T 4e6p_A           82 GLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRR-----------GEA  150 (259)
T ss_dssp             SCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS-----------CCT
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhcc-----------CCC
Confidence            899999999986554433333333    4456655544    555565554 57999999987762           344


Q ss_pred             CCChHHHHHHHHHHHHHHHhhcC---CCcEEEEecC
Q 025786          216 PINPYGKAKKMAEDIILDFSKNS---DMAVLQCHRF  248 (248)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~~~~~---gi~~~~v~Pf  248 (248)
                      +..+|+.||++.+.+++.++.++   |+++++++|.
T Consensus       151 ~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG  186 (259)
T 4e6p_A          151 LVAIYCATKAAVISLTQSAGLDLIKHRINVNAIAPG  186 (259)
T ss_dssp             TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred             CChHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEEC
Confidence            56789999999999999999874   8999999994

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=99.95  E-value=4.8e-27  Score=194.94  Aligned_cols=164  Identities=18%  Similarity=0.117  Sum_probs=126.0

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~  144 (248)
                      +|++|||||+||||++++++|+++|++|++++|+....+   +..+++...+.++.++.+|++|.+++.+++++     +
T Consensus        29 ~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~---~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g  105 (262)
T 3rkr_A           29 GQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLR---AVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAHG  105 (262)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH---HHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHH---HHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhcC
Confidence            489999999999999999999999999999997543333   32233322346789999999999999988876     6


Q ss_pred             CCCEEEEcccccc-cCCCCCCc----hhhHhhhHHHHH----HHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCC
Q 025786          145 AFDAVMHFAAVAY-VGESTLDP----LKYYHNITSNTL----VVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (248)
Q Consensus       145 ~iD~li~~Ag~~~-~~~~~~~~----~~~~~~~~~~~~----~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~  215 (248)
                      ++|+||||||+.. .....+.+    +..++.|+.++.    .+++.|++.+.++||++||.+++           .+.+
T Consensus       106 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~-----------~~~~  174 (262)
T 3rkr_A          106 RCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGK-----------NPVA  174 (262)
T ss_dssp             CCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCSS-----------CCCT
T ss_pred             CCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhhc-----------CCCC
Confidence            8999999999832 22222222    334455555544    45666777777899999998776           2445


Q ss_pred             CCChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          216 PINPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      +...|+.||++.+.+++.++.+   .|+++++++|
T Consensus       175 ~~~~Y~asKaa~~~l~~~la~e~~~~gi~v~~v~P  209 (262)
T 3rkr_A          175 DGAAYTASKWGLNGLMTSAAEELRQHQVRVSLVAP  209 (262)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEE
T ss_pred             CCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEec
Confidence            5789999999999999999987   6899999998

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=99.95  E-value=3.4e-27  Score=197.87  Aligned_cols=166  Identities=16%  Similarity=0.118  Sum_probs=126.8

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCC-CCceEEEEccCCCHHHHHHHhhc-----
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPE-PGRLQFIYADLGDAKAVNKFFSE-----  143 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~-----  143 (248)
                      +|++|||||+||||++++++|+++|++|++++|..  .+...+..+++... +.++.++.+|++|.+++++++++     
T Consensus        25 ~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  102 (281)
T 3v2h_A           25 TKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGA--PDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVADRF  102 (281)
T ss_dssp             TCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCC--HHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHHHT
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCC--hHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHHHC
Confidence            38999999999999999999999999999998632  22222322333222 45789999999999999988875     


Q ss_pred             CCCCEEEEcccccccCCCCCCchh----hHhhhHHHHHH----HHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCC
Q 025786          144 NAFDAVMHFAAVAYVGESTLDPLK----YYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (248)
Q Consensus       144 ~~iD~li~~Ag~~~~~~~~~~~~~----~~~~~~~~~~~----ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~  215 (248)
                      +++|+||||||+.......+.+.+    .++.|+.++..    +++.|++++.++||++||..++.           +.+
T Consensus       103 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~  171 (281)
T 3v2h_A          103 GGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLV-----------ASP  171 (281)
T ss_dssp             SSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS-----------CCT
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCccccc-----------CCC
Confidence            689999999998655443333333    34455555444    56667777778999999987762           334


Q ss_pred             CCChHHHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          216 PINPYGKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                      +...|+.||++.+.+++.++.+   .|+++++++|.
T Consensus       172 ~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG  207 (281)
T 3v2h_A          172 FKSAYVAAKHGIMGLTKTVALEVAESGVTVNSICPG  207 (281)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred             CchHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEECC
Confidence            5679999999999999999988   48999999983

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=99.95  E-value=2.9e-27  Score=197.10  Aligned_cols=155  Identities=14%  Similarity=0.154  Sum_probs=123.3

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~  144 (248)
                      +|+||||||+||||++++++|+++|++|++++|+....             ...+..+++|++|.+++++++++     +
T Consensus        14 ~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~-------------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   80 (269)
T 3vtz_A           14 DKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSD-------------VNVSDHFKIDVTNEEEVKEAVEKTTKKYG   80 (269)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--C-------------TTSSEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhc-------------cCceeEEEecCCCHHHHHHHHHHHHHHcC
Confidence            39999999999999999999999999999998754321             12467789999999999988875     6


Q ss_pred             CCCEEEEcccccccCCCCCCchhhH----hhhHHHH----HHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCC
Q 025786          145 AFDAVMHFAAVAYVGESTLDPLKYY----HNITSNT----LVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (248)
Q Consensus       145 ~iD~li~~Ag~~~~~~~~~~~~~~~----~~~~~~~----~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~  216 (248)
                      ++|+||||||+.......+.+.+.|    +.|+.++    +.+++.|++++.++||++||..++.           +.++
T Consensus        81 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~  149 (269)
T 3vtz_A           81 RIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYA-----------ATKN  149 (269)
T ss_dssp             CCCEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS-----------BCTT
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhcc-----------CCCC
Confidence            8999999999865544444444433    4555554    4466677777778999999988873           3445


Q ss_pred             CChHHHHHHHHHHHHHHHhhcC--CCcEEEEecC
Q 025786          217 INPYGKAKKMAEDIILDFSKNS--DMAVLQCHRF  248 (248)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~~~~~--gi~~~~v~Pf  248 (248)
                      ...|+.||++.+.+++.++.++  ++++++|+|.
T Consensus       150 ~~~Y~asKaa~~~l~~~la~e~~~~i~vn~v~PG  183 (269)
T 3vtz_A          150 AAAYVTSKHALLGLTRSVAIDYAPKIRCNAVCPG  183 (269)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEC
T ss_pred             ChhHHHHHHHHHHHHHHHHHHhcCCCEEEEEEEC
Confidence            6799999999999999999886  7999999983

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=99.95  E-value=4e-27  Score=195.07  Aligned_cols=155  Identities=15%  Similarity=0.155  Sum_probs=121.4

Q ss_pred             CCceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc----
Q 025786           68 EGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----  143 (248)
Q Consensus        68 ~~~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~----  143 (248)
                      +| |++|||||++|||+++++.|+++|++|++++|+...  .           ..+..++++|++|++++++++++    
T Consensus        10 ~G-K~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~--~-----------~~~~~~~~~Dv~~~~~v~~~~~~~~~~   75 (261)
T 4h15_A           10 RG-KRALITAGTKGAGAATVSLFLELGAQVLTTARARPE--G-----------LPEELFVEADLTTKEGCAIVAEATRQR   75 (261)
T ss_dssp             TT-CEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCT--T-----------SCTTTEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CC-CEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchh--C-----------CCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            44 999999999999999999999999999999974321  1           12334689999999999888876    


Q ss_pred             -CCCCEEEEccccccc--CCCCCCchhhHh----hhHHH----HHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCC
Q 025786          144 -NAFDAVMHFAAVAYV--GESTLDPLKYYH----NITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEET  212 (248)
Q Consensus       144 -~~iD~li~~Ag~~~~--~~~~~~~~~~~~----~~~~~----~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~  212 (248)
                       +++|+||||||+...  .+..+.+++.|+    .|+.+    ++.++|.|++++.++||++||...+-           
T Consensus        76 ~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~~~-----------  144 (261)
T 4h15_A           76 LGGVDVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQRVL-----------  144 (261)
T ss_dssp             TSSCSEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS-----------
T ss_pred             cCCCCEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhhcc-----------
Confidence             789999999997543  233333444444    34333    45688999988889999999977651           


Q ss_pred             CCC-CCChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          213 PQA-PINPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       213 ~~~-~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      +.+ ....|++||++.+.|++.++.|   +||+|++|.|
T Consensus       145 ~~~~~~~~Y~asKaal~~lt~~lA~Ela~~gIrVN~V~P  183 (261)
T 4h15_A          145 PLPESTTAYAAAKAALSTYSKAMSKEVSPKGVRVVRVSP  183 (261)
T ss_dssp             CCTTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE
T ss_pred             CCCCccHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEeC
Confidence            222 3568999999999999999988   6899999998

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=99.95  E-value=4.5e-27  Score=196.31  Aligned_cols=164  Identities=16%  Similarity=0.116  Sum_probs=125.9

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc------C
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE------N  144 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~------~  144 (248)
                      |+++||||+||||++++++|+++|++|++++|+...   +.+..+++...+.++.++.+|++|++++++++++      +
T Consensus        22 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~---~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   98 (273)
T 1ae1_A           22 TTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKE---LDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDG   98 (273)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHH---HHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTS
T ss_pred             CEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHH---HHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            899999999999999999999999999999975432   2222222222245788999999999999888864      6


Q ss_pred             CCCEEEEcccccccCCCCCCchhhH----hhhHHHHH----HHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCC
Q 025786          145 AFDAVMHFAAVAYVGESTLDPLKYY----HNITSNTL----VVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (248)
Q Consensus       145 ~iD~li~~Ag~~~~~~~~~~~~~~~----~~~~~~~~----~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~  216 (248)
                      ++|+||||||+....+..+.+.+.|    +.|+.++.    .+++.|++++.++||++||.+++.           +.++
T Consensus        99 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~-----------~~~~  167 (273)
T 1ae1_A           99 KLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFS-----------ALPS  167 (273)
T ss_dssp             CCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTS-----------CCTT
T ss_pred             CCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHhhcC-----------CCCC
Confidence            8999999999865444433333333    34555544    356666777778999999988873           2345


Q ss_pred             CChHHHHHHHHHHHHHHHhhcC---CCcEEEEecC
Q 025786          217 INPYGKAKKMAEDIILDFSKNS---DMAVLQCHRF  248 (248)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~~~~~---gi~~~~v~Pf  248 (248)
                      ...|+.||++.+.+++.++.++   |+++++++|.
T Consensus       168 ~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg  202 (273)
T 1ae1_A          168 VSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPG  202 (273)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred             cchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeC
Confidence            6789999999999999999874   8999999993

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=99.95  E-value=1.7e-27  Score=198.19  Aligned_cols=166  Identities=14%  Similarity=0.088  Sum_probs=127.1

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~  144 (248)
                      +|++|||||+||||++++++|+++|++|++++|+....++..+.+.+.  .+.++.++++|++|.+++++++++     +
T Consensus        20 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   97 (266)
T 4egf_A           20 GKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQ--FGTDVHTVAIDLAEPDAPAELARRAAEAFG   97 (266)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH--HCCCEEEEECCTTSTTHHHHHHHHHHHHHT
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh--cCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            399999999999999999999999999999997543333333333221  145789999999999999888875     6


Q ss_pred             CCCEEEEcccccccCCCCCCchhh----HhhhHHHHH----HHHHHHHHcC-CCEEEEeccceecCCCCCCCCCCCCCCC
Q 025786          145 AFDAVMHFAAVAYVGESTLDPLKY----YHNITSNTL----VVLESMARHG-VDTLIYSSTCATYGEPEKMPITEETPQA  215 (248)
Q Consensus       145 ~iD~li~~Ag~~~~~~~~~~~~~~----~~~~~~~~~----~ll~~~~~~~-~~~iV~~SS~~~~g~~~~~~~~e~~~~~  215 (248)
                      ++|+||||||+....+..+.+.+.    ++.|+.++.    .+++.|.+++ .++||++||...+.           +.+
T Consensus        98 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~  166 (266)
T 4egf_A           98 GLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALA-----------PLP  166 (266)
T ss_dssp             SCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS-----------CCT
T ss_pred             CCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhcc-----------CCC
Confidence            899999999987654433333333    445555543    3566666655 57999999988762           345


Q ss_pred             CCChHHHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          216 PINPYGKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                      +...|+.||++.+.+++.++.+   +|+++++|+|.
T Consensus       167 ~~~~Y~asK~a~~~l~~~la~e~~~~gI~vn~v~PG  202 (266)
T 4egf_A          167 DHYAYCTSKAGLVMATKVLARELGPHGIRANSVCPT  202 (266)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEES
T ss_pred             CChHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeC
Confidence            5779999999999999999988   58999999983

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=99.95  E-value=7e-27  Score=192.93  Aligned_cols=165  Identities=16%  Similarity=0.169  Sum_probs=125.3

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccC--CCHHHHHHHhhc----
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL--GDAKAVNKFFSE----  143 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl--~~~~~~~~~~~~----  143 (248)
                      +|+++||||+||||++++++|+++|++|++++|+....++..+.+.+..  ..++.++.+|+  +|.+++++++++    
T Consensus        12 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (252)
T 3f1l_A           12 DRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEET--GRQPQWFILDLLTCTSENCQQLAQRIAVN   89 (252)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH--SCCCEEEECCTTTCCHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhc--CCCceEEEEecccCCHHHHHHHHHHHHHh
Confidence            3999999999999999999999999999999975433333333333221  23678899999  999999888875    


Q ss_pred             -CCCCEEEEccccccc-CCCCCCchh----hHhhhHHHHH----HHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCC
Q 025786          144 -NAFDAVMHFAAVAYV-GESTLDPLK----YYHNITSNTL----VVLESMARHGVDTLIYSSTCATYGEPEKMPITEETP  213 (248)
Q Consensus       144 -~~iD~li~~Ag~~~~-~~~~~~~~~----~~~~~~~~~~----~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~  213 (248)
                       +++|+||||||+... .+..+.+.+    .++.|+.++.    .+++.|++++.++||++||...+.           +
T Consensus        90 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~-----------~  158 (252)
T 3f1l_A           90 YPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQ-----------G  158 (252)
T ss_dssp             CSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGTS-----------C
T ss_pred             CCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhhcc-----------C
Confidence             689999999998532 233333333    3455555543    466677777778999999987762           3


Q ss_pred             CCCCChHHHHHHHHHHHHHHHhhcCC--CcEEEEec
Q 025786          214 QAPINPYGKAKKMAEDIILDFSKNSD--MAVLQCHR  247 (248)
Q Consensus       214 ~~~~~~Y~~sK~a~e~l~~~~~~~~g--i~~~~v~P  247 (248)
                      .++...|+.||++.+.+++.++.+++  +++++|+|
T Consensus       159 ~~~~~~Y~asK~a~~~l~~~la~e~~~~irvn~v~P  194 (252)
T 3f1l_A          159 RANWGAYAASKFATEGMMQVLADEYQQRLRVNCINP  194 (252)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEEC
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHHhcCCcEEEEEec
Confidence            44567899999999999999999965  89999998

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.95  E-value=2.9e-27  Score=195.42  Aligned_cols=165  Identities=19%  Similarity=0.167  Sum_probs=127.2

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEec-CCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDN-LSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----  143 (248)
                      .|+||||||+||||++++++|+++|++|+++++ .....+   +..+++.....++.++.+|++|.+++++++++     
T Consensus        13 ~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   89 (256)
T 3ezl_A           13 QRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRV---KWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKAEV   89 (256)
T ss_dssp             CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHH---HHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHH---HHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHHhc
Confidence            399999999999999999999999999999884 222222   22222222345789999999999999988875     


Q ss_pred             CCCCEEEEcccccccCCCCCCch----hhHhhhHHH----HHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCC
Q 025786          144 NAFDAVMHFAAVAYVGESTLDPL----KYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (248)
Q Consensus       144 ~~iD~li~~Ag~~~~~~~~~~~~----~~~~~~~~~----~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~  215 (248)
                      +++|+||||||+.......+.+.    ..++.|+.+    ++.+++.|++.+.++||++||...+.           +.+
T Consensus        90 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~  158 (256)
T 3ezl_A           90 GEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQK-----------GQF  158 (256)
T ss_dssp             CCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGG-----------SCS
T ss_pred             CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcc-----------CCC
Confidence            58999999999875544333333    344556555    44467778888778999999977762           345


Q ss_pred             CCChHHHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          216 PINPYGKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                      +...|+.||++.+.+++.++.+   .|+++++++|-
T Consensus       159 ~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG  194 (256)
T 3ezl_A          159 GQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPG  194 (256)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred             CCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEEEC
Confidence            5789999999999999999988   58999999983

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=99.95  E-value=6.3e-27  Score=192.83  Aligned_cols=162  Identities=16%  Similarity=0.167  Sum_probs=125.5

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      |+++||||+||||++++++|+++|++|++++|+..  +...+.+++.   +.++.++++|++|.+++++++++     ++
T Consensus         8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~--~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   82 (249)
T 2ew8_A            8 KLAVITGGANGIGRAIAERFAVEGADIAIADLVPA--PEAEAAIRNL---GRRVLTVKCDVSQPGDVEAFGKQVISTFGR   82 (249)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCC--HHHHHHHHHT---TCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCch--hHHHHHHHhc---CCcEEEEEeecCCHHHHHHHHHHHHHHcCC
Confidence            89999999999999999999999999999997541  2222223222   35788999999999999888764     68


Q ss_pred             CCEEEEcccccccCCCCCCch----hhHhhhHHH----HHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYVGESTLDPL----KYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (248)
Q Consensus       146 iD~li~~Ag~~~~~~~~~~~~----~~~~~~~~~----~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (248)
                      +|+||||||+....+..+.+.    ..++.|+.+    ++.+++.|++++.++||++||..++.           +.++.
T Consensus        83 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~~  151 (249)
T 2ew8_A           83 CDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWL-----------KIEAY  151 (249)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGS-----------CCSSC
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcc-----------CCCCc
Confidence            999999999865433322223    344556555    44466778777778999999988773           33456


Q ss_pred             ChHHHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          218 NPYGKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                      ..|+.||++.+.+++.++.+   .|+++++|+|.
T Consensus       152 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg  185 (249)
T 2ew8_A          152 THYISTKAANIGFTRALASDLGKDGITVNAIAPS  185 (249)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecC
Confidence            78999999999999999987   48999999993

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=99.95  E-value=2.2e-27  Score=207.89  Aligned_cols=179  Identities=26%  Similarity=0.287  Sum_probs=137.4

Q ss_pred             CceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcch-------------hhhhhhhhc-CCCCceEEEEccCCCH
Q 025786           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIG-------------AVKVLQELF-PEPGRLQFIYADLGDA  134 (248)
Q Consensus        69 ~~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~-------------~~~~~~~~~-~~~~~~~~~~~Dl~~~  134 (248)
                      .+++||||||+||||++++++|+++|++|++++|..+....             +.+.+.... ....++.++.+|++|.
T Consensus        10 ~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~Dl~d~   89 (404)
T 1i24_A           10 HGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDF   89 (404)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSH
T ss_pred             CCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECCCCCH
Confidence            34899999999999999999999999999999875332110             001111100 0124688999999999


Q ss_pred             HHHHHHhhcCCCCEEEEcccccccCCCCCCch---hhHhhhHHHHHHHHHHHHHcCC-CEEEEeccceecCCCCCCCCCC
Q 025786          135 KAVNKFFSENAFDAVMHFAAVAYVGESTLDPL---KYYHNITSNTLVVLESMARHGV-DTLIYSSTCATYGEPEKMPITE  210 (248)
Q Consensus       135 ~~~~~~~~~~~iD~li~~Ag~~~~~~~~~~~~---~~~~~~~~~~~~ll~~~~~~~~-~~iV~~SS~~~~g~~~~~~~~e  210 (248)
                      +++.++++..++|+||||||.........+++   ..++.|+.++.++++++.+.+. ++||++||.++||... .+++|
T Consensus        90 ~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~~~V~~SS~~vyg~~~-~~~~E  168 (404)
T 1i24_A           90 EFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPN-IDIEE  168 (404)
T ss_dssp             HHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCS-SCBCS
T ss_pred             HHHHHHHhccCCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHhCCCcEEEEeCcHHHhCCCC-CCCCc
Confidence            99999987545999999999754322222333   3667899999999999998876 5999999999998654 35666


Q ss_pred             C--------------CCCCCCChHHHHHHHHHHHHHHHhhcCCCcEEEEecC
Q 025786          211 E--------------TPQAPINPYGKAKKMAEDIILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       211 ~--------------~~~~~~~~Y~~sK~a~e~l~~~~~~~~gi~~~~v~Pf  248 (248)
                      +              .+..|.++|+.||.++|.+++.++.++|++++++||+
T Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ivrp~  220 (404)
T 1i24_A          169 GYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQG  220 (404)
T ss_dssp             SEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEEC
T ss_pred             cccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhcCCeEEEEecc
Confidence            5              4667788999999999999999998889999999995

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=99.95  E-value=2e-27  Score=198.70  Aligned_cols=164  Identities=15%  Similarity=0.124  Sum_probs=128.2

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc----CC
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----NA  145 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~----~~  145 (248)
                      +|+++||||++|||++++++|+++|++|++++|+....++..+.+..   .+.++.++.+|++|.+++++++++    ++
T Consensus        33 gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~Dv~~~~~~~~~~~~~~~~g~  109 (275)
T 4imr_A           33 GRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIA---SGGTAQELAGDLSEAGAGTDLIERAEAIAP  109 (275)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHH---TTCCEEEEECCTTSTTHHHHHHHHHHHHSC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHh---cCCeEEEEEecCCCHHHHHHHHHHHHHhCC
Confidence            39999999999999999999999999999999866554444433333   356789999999999998888765    68


Q ss_pred             CCEEEEcccccccCCCCCCchh----hHhhhHHHH----HHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYVGESTLDPLK----YYHNITSNT----LVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (248)
Q Consensus       146 iD~li~~Ag~~~~~~~~~~~~~----~~~~~~~~~----~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (248)
                      +|+||||||+.......+.+.+    .++.|+.++    +.+++.|++++.++||++||...+.           +..+.
T Consensus       110 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~-----------~~~~~  178 (275)
T 4imr_A          110 VDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQLR-----------PKSVV  178 (275)
T ss_dssp             CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS-----------CCTTB
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCC-----------CCCCc
Confidence            9999999998654443333333    344555554    3466777777778999999987763           33446


Q ss_pred             ChHHHHHHHHHHHHHHHhhcC---CCcEEEEec
Q 025786          218 NPYGKAKKMAEDIILDFSKNS---DMAVLQCHR  247 (248)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~~~~~---gi~~~~v~P  247 (248)
                      ..|+.||++.+.+++.++.++   |+++++|+|
T Consensus       179 ~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~P  211 (275)
T 4imr_A          179 TAYAATKAAQHNLIQSQARDFAGDNVLLNTLAP  211 (275)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE
T ss_pred             hhhHHHHHHHHHHHHHHHHHhcccCcEEEEEEe
Confidence            679999999999999999884   899999998

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=99.95  E-value=2.8e-27  Score=194.59  Aligned_cols=165  Identities=18%  Similarity=0.093  Sum_probs=125.1

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      |+++||||+||||++++++|+++|++|++++|.  +.+...+..+++...+.++.++++|++|++++++++++     ++
T Consensus         5 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~--~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   82 (246)
T 2uvd_A            5 KVALVTGASRGIGRAIAIDLAKQGANVVVNYAG--NEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVFGQ   82 (246)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESS--CHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC--CHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            899999999999999999999999999999862  22222222222222245788999999999999988875     58


Q ss_pred             CCEEEEcccccccCCCCCCc----hhhHhhhHHH----HHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYVGESTLDP----LKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (248)
Q Consensus       146 iD~li~~Ag~~~~~~~~~~~----~~~~~~~~~~----~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (248)
                      +|+||||||+.......+.+    +..++.|+.+    ++.+++.|++++.++||++||.+.+.           +.++.
T Consensus        83 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~~  151 (246)
T 2uvd_A           83 VDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVT-----------GNPGQ  151 (246)
T ss_dssp             CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHH-----------CCTTB
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCHHhcC-----------CCCCC
Confidence            99999999986543322222    2344556555    45577778777778999999987652           22346


Q ss_pred             ChHHHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          218 NPYGKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                      ..|+.||++.+.+++.++.+   .|+++++++|-
T Consensus       152 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg  185 (246)
T 2uvd_A          152 ANYVAAKAGVIGLTKTSAKELASRNITVNAIAPG  185 (246)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred             chHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEec
Confidence            78999999999999999877   58999999993

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=99.95  E-value=5e-27  Score=200.11  Aligned_cols=168  Identities=17%  Similarity=0.183  Sum_probs=127.9

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCC---------CcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHH
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSR---------GNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKF  140 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~---------~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~  140 (248)
                      +|++|||||+||||++++++|+++|++|++++|...         ..+.+.+..+.+...+.++.++.+|++|+++++++
T Consensus        46 gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~  125 (317)
T 3oec_A           46 GKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASLQAV  125 (317)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHH
Confidence            399999999999999999999999999999987521         12223333333333356789999999999999988


Q ss_pred             hhc-----CCCCEEEEcccccccCCCCCCchhh----HhhhHHHHHH----HHHHHHHcC-CCEEEEeccceecCCCCCC
Q 025786          141 FSE-----NAFDAVMHFAAVAYVGESTLDPLKY----YHNITSNTLV----VLESMARHG-VDTLIYSSTCATYGEPEKM  206 (248)
Q Consensus       141 ~~~-----~~iD~li~~Ag~~~~~~~~~~~~~~----~~~~~~~~~~----ll~~~~~~~-~~~iV~~SS~~~~g~~~~~  206 (248)
                      +++     +++|+||||||+.......+.+.+.    ++.|+.++..    +++.|++++ .++||++||...+.     
T Consensus       126 ~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~~~-----  200 (317)
T 3oec_A          126 VDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLR-----  200 (317)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGGSS-----
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHhcC-----
Confidence            875     6899999999987654443333333    4455555443    666676654 57999999987762     


Q ss_pred             CCCCCCCCCCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          207 PITEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       207 ~~~e~~~~~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                            +.++...|+.||++.+.+++.++.+   .||++++|+|.
T Consensus       201 ------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG  239 (317)
T 3oec_A          201 ------GAPGQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPG  239 (317)
T ss_dssp             ------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred             ------CCCCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecC
Confidence                  3345678999999999999999988   48999999994

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=99.95  E-value=2.6e-27  Score=198.48  Aligned_cols=165  Identities=19%  Similarity=0.166  Sum_probs=119.9

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~  144 (248)
                      +|++|||||+||||++++++|+++|++|+++++.  +.+...+..+++...+.++.++++|++|.+++++++++     +
T Consensus        29 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  106 (280)
T 4da9_A           29 RPVAIVTGGRRGIGLGIARALAASGFDIAITGIG--DAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEFG  106 (280)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC--CHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHHS
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCC--CHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            3899999999999999999999999999999852  22233333333333356799999999999999888875     6


Q ss_pred             CCCEEEEccccc--ccCCCCCCc----hhhHhhhHHHHH----HHHHHHHHcC---CCEEEEeccceecCCCCCCCCCCC
Q 025786          145 AFDAVMHFAAVA--YVGESTLDP----LKYYHNITSNTL----VVLESMARHG---VDTLIYSSTCATYGEPEKMPITEE  211 (248)
Q Consensus       145 ~iD~li~~Ag~~--~~~~~~~~~----~~~~~~~~~~~~----~ll~~~~~~~---~~~iV~~SS~~~~g~~~~~~~~e~  211 (248)
                      ++|+||||||+.  ...+..+.+    +..++.|+.++.    .+++.|++++   .++||++||..++.          
T Consensus       107 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~----------  176 (280)
T 4da9_A          107 RIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVM----------  176 (280)
T ss_dssp             CCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC--------------
T ss_pred             CCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhcc----------
Confidence            899999999983  222222222    334456666644    4666776654   57999999987762          


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          212 TPQAPINPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       212 ~~~~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                       +.++...|+.||++.+.+++.++.+   +|+++++|+|
T Consensus       177 -~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~P  214 (280)
T 4da9_A          177 -TSPERLDYCMSKAGLAAFSQGLALRLAETGIAVFEVRP  214 (280)
T ss_dssp             ----CCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEE
T ss_pred             -CCCCccHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEee
Confidence             3345678999999999999999988   6899999998

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=99.95  E-value=7.3e-27  Score=195.38  Aligned_cols=166  Identities=15%  Similarity=0.165  Sum_probs=127.4

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~  144 (248)
                      +|++|||||+||||++++++|+++|++|++++|+....++..+.++   ..+.++.++++|++|.+++++++++     +
T Consensus        32 gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g  108 (276)
T 3r1i_A           32 GKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIA---GVGGKALPIRCDVTQPDQVRGMLDQMTGELG  108 (276)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHH---HTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH---hcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            3999999999999999999999999999999976544333333333   2345788999999999999998875     6


Q ss_pred             CCCEEEEcccccccCCCCCCchhhH----hhhHHHHH----HHHHHHHHcC-CCEEEEeccceecCCCCCCCCCCCCCCC
Q 025786          145 AFDAVMHFAAVAYVGESTLDPLKYY----HNITSNTL----VVLESMARHG-VDTLIYSSTCATYGEPEKMPITEETPQA  215 (248)
Q Consensus       145 ~iD~li~~Ag~~~~~~~~~~~~~~~----~~~~~~~~----~ll~~~~~~~-~~~iV~~SS~~~~g~~~~~~~~e~~~~~  215 (248)
                      ++|+||||||+.......+.+.+.|    +.|+.++.    .+++.|.+++ .++||++||...+...         ...
T Consensus       109 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~---------~~~  179 (276)
T 3r1i_A          109 GIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIIN---------IPQ  179 (276)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC---------CSS
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccC---------CCC
Confidence            8999999999876554444444444    45555544    4566666665 3799999998765211         123


Q ss_pred             CCChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          216 PINPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      +...|+.||++.+.+++.++.+   .|+++++|+|
T Consensus       180 ~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~P  214 (276)
T 3r1i_A          180 QVSHYCTSKAAVVHLTKAMAVELAPHQIRVNSVSP  214 (276)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE
T ss_pred             CcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEee
Confidence            4678999999999999999988   6899999998

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=99.95  E-value=3.4e-27  Score=194.28  Aligned_cols=161  Identities=20%  Similarity=0.195  Sum_probs=126.2

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~  144 (248)
                      +|+++||||+||||++++++|+++|++|++++|+.   +...+..+++   +.++.++++|++|.+++++++++     +
T Consensus         6 gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~---~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   79 (247)
T 3rwb_A            6 GKTALVTGAAQGIGKAIAARLAADGATVIVSDINA---EGAKAAAASI---GKKARAIAADISDPGSVKALFAEIQALTG   79 (247)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCH---HHHHHHHHHH---CTTEEECCCCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH---HHHHHHHHHh---CCceEEEEcCCCCHHHHHHHHHHHHHHCC
Confidence            39999999999999999999999999999998643   3333333444   35788999999999999988875     6


Q ss_pred             CCCEEEEcccccccCCCCCCchh----hHhhhHHHHH----HHHHHHHHcC-CCEEEEeccceecCCCCCCCCCCCCCCC
Q 025786          145 AFDAVMHFAAVAYVGESTLDPLK----YYHNITSNTL----VVLESMARHG-VDTLIYSSTCATYGEPEKMPITEETPQA  215 (248)
Q Consensus       145 ~iD~li~~Ag~~~~~~~~~~~~~----~~~~~~~~~~----~ll~~~~~~~-~~~iV~~SS~~~~g~~~~~~~~e~~~~~  215 (248)
                      ++|+||||||+.......+.+.+    .++.|+.++.    .+++.|++++ .++||++||...+.           +.+
T Consensus        80 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~  148 (247)
T 3rwb_A           80 GIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFA-----------GTP  148 (247)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHH-----------TCT
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhcc-----------CCC
Confidence            89999999998755443333333    3445555544    4566687766 68999999987762           334


Q ss_pred             CCChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          216 PINPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      +...|+.||++.+.+++.++.+   +|+++++++|
T Consensus       149 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~P  183 (247)
T 3rwb_A          149 NMAAYVAAKGGVIGFTRALATELGKYNITANAVTP  183 (247)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE
T ss_pred             CchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEee
Confidence            5779999999999999999988   6899999998

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=99.95  E-value=2.4e-27  Score=198.11  Aligned_cols=168  Identities=14%  Similarity=0.137  Sum_probs=127.1

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcch----hhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc---
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIG----AVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE---  143 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~----~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~---  143 (248)
                      |+++||||++|||++++++|+++|++|++++|+..+.+.    ..+..+++...+.++.++++|++|.+++++++++   
T Consensus         7 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   86 (274)
T 3e03_A            7 KTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAVAATVD   86 (274)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHH
Confidence            999999999999999999999999999999987654322    2222222222246789999999999999988875   


Q ss_pred             --CCCCEEEEcccccccCCCCCCchhh----HhhhHHHH----HHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCC
Q 025786          144 --NAFDAVMHFAAVAYVGESTLDPLKY----YHNITSNT----LVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETP  213 (248)
Q Consensus       144 --~~iD~li~~Ag~~~~~~~~~~~~~~----~~~~~~~~----~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~  213 (248)
                        +++|+||||||+.......+.+.+.    ++.|+.++    +.+++.|++++.++||++||...+...         +
T Consensus        87 ~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~---------~  157 (274)
T 3e03_A           87 TFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPA---------W  157 (274)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCCCCHH---------H
T ss_pred             HcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHhcCCC---------C
Confidence              6899999999987554443333333    34555554    446666777777899999997765210         0


Q ss_pred             CCCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          214 QAPINPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       214 ~~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      .++...|+.||++.+.+++.++.+   .|+++++|+|
T Consensus       158 ~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~P  194 (274)
T 3e03_A          158 WGAHTGYTLAKMGMSLVTLGLAAEFGPQGVAINALWP  194 (274)
T ss_dssp             HHHCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEC
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHhhhcCEEEEEEEC
Confidence            234668999999999999999988   5899999998

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=99.95  E-value=3.9e-27  Score=196.03  Aligned_cols=158  Identities=17%  Similarity=0.166  Sum_probs=125.6

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~  144 (248)
                      +|++|||||+||||++++++|+++|++|++++|+..   .+    ++..  ..++.++.+|++|.+++++++++     +
T Consensus        16 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~---~~----~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   86 (266)
T 3p19_A           16 KKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVE---RL----KALN--LPNTLCAQVDVTDKYTFDTAITRAEKIYG   86 (266)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHH---HH----HTTC--CTTEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHH---HH----HHhh--cCCceEEEecCCCHHHHHHHHHHHHHHCC
Confidence            389999999999999999999999999999986422   11    1111  23688899999999999988875     6


Q ss_pred             CCCEEEEcccccccCCCCCCchhh----HhhhHHHHHH----HHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCC
Q 025786          145 AFDAVMHFAAVAYVGESTLDPLKY----YHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (248)
Q Consensus       145 ~iD~li~~Ag~~~~~~~~~~~~~~----~~~~~~~~~~----ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~  216 (248)
                      ++|+||||||+.......+.+.+.    ++.|+.++..    +++.|++.+.++||++||.+++.           +.++
T Consensus        87 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~~~-----------~~~~  155 (266)
T 3p19_A           87 PADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKK-----------TFPD  155 (266)
T ss_dssp             SEEEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTS-----------CCTT
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhCC-----------CCCC
Confidence            899999999987655444444433    4556555444    77778888888999999988762           3445


Q ss_pred             CChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          217 INPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      ...|+.||++.+.+++.++.+   .|+++++|+|
T Consensus       156 ~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~P  189 (266)
T 3p19_A          156 HAAYCGTKFAVHAISENVREEVAASNVRVMTIAP  189 (266)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEE
T ss_pred             CchHHHHHHHHHHHHHHHHHHhcccCcEEEEEee
Confidence            779999999999999999988   5899999998

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=99.95  E-value=5.3e-27  Score=198.56  Aligned_cols=165  Identities=16%  Similarity=0.162  Sum_probs=127.2

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~  144 (248)
                      +|+||||||+||||++++++|+++|++|++++|+....   .+..+++...+.++.++.+|++|.+++++++++     +
T Consensus        31 gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~---~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  107 (301)
T 3tjr_A           31 GRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPAL---EQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLG  107 (301)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH---HHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH---HHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhCC
Confidence            48999999999999999999999999999999754333   333333322345789999999999999988875     5


Q ss_pred             CCCEEEEcccccccCCCCCCc----hhhHhhhHHHHHH----HHHHHHHcC-CCEEEEeccceecCCCCCCCCCCCCCCC
Q 025786          145 AFDAVMHFAAVAYVGESTLDP----LKYYHNITSNTLV----VLESMARHG-VDTLIYSSTCATYGEPEKMPITEETPQA  215 (248)
Q Consensus       145 ~iD~li~~Ag~~~~~~~~~~~----~~~~~~~~~~~~~----ll~~~~~~~-~~~iV~~SS~~~~g~~~~~~~~e~~~~~  215 (248)
                      ++|+||||||+.......+.+    +..++.|+.++.+    +++.|.+++ .++||++||.+++.           +.+
T Consensus       108 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~  176 (301)
T 3tjr_A          108 GVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLV-----------PNA  176 (301)
T ss_dssp             SCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTS-----------CCT
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcC-----------CCC
Confidence            899999999987544433333    3345556655444    566666665 67999999988762           345


Q ss_pred             CCChHHHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          216 PINPYGKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                      +...|+.||++.+.+++.++.+   .|+++++|+|-
T Consensus       177 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG  212 (301)
T 3tjr_A          177 GLGTYGVAKYGVVGLAETLAREVKPNGIGVSVLCPM  212 (301)
T ss_dssp             TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEECCS
T ss_pred             CchHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECC
Confidence            5779999999999999999988   48999999983

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=99.95  E-value=1.3e-27  Score=208.03  Aligned_cols=170  Identities=26%  Similarity=0.347  Sum_probs=132.3

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCC-CEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDS-YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~  148 (248)
                      ||+||||||+|+||++++++|+++| ++|++++|.......   .   + ....++.++.+|++|.+++.++++  ++|+
T Consensus        32 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~---~---l-~~~~~v~~~~~Dl~d~~~l~~~~~--~~d~  102 (377)
T 2q1s_A           32 NTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKI---N---V-PDHPAVRFSETSITDDALLASLQD--EYDY  102 (377)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGG---G---S-CCCTTEEEECSCTTCHHHHHHCCS--CCSE
T ss_pred             CCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchh---h---c-cCCCceEEEECCCCCHHHHHHHhh--CCCE
Confidence            4899999999999999999999999 999999875433211   1   1 113468899999999999999887  7999


Q ss_pred             EEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHc-CCCEEEEeccceecCCCCCCCCC--CCC---CC-CCCChHH
Q 025786          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARH-GVDTLIYSSTCATYGEPEKMPIT--EET---PQ-APINPYG  221 (248)
Q Consensus       149 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~-~~~~iV~~SS~~~~g~~~~~~~~--e~~---~~-~~~~~Y~  221 (248)
                      ||||||.........++.+.++.|+.++.++++++.+. +.++||++||.++||.....+++  |+.   +. .|.++|+
T Consensus       103 Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~~~~~~~Y~  182 (377)
T 2q1s_A          103 VFHLATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAAGCSIAEKTFDDAKATEETDIVSLHNNDSPYS  182 (377)
T ss_dssp             EEECCCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEEC--------------CCCCCCCSSCCCSHHH
T ss_pred             EEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCCHHHcCCCCCCCcCcccccccccccCCCCchH
Confidence            99999975432222355677888999999999999888 78899999999999876666777  877   66 7889999


Q ss_pred             HHHHHHHHHHHHHhhcCCCcEEEEecC
Q 025786          222 KAKKMAEDIILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       222 ~sK~a~e~l~~~~~~~~gi~~~~v~Pf  248 (248)
                      .||.++|.+++.++.++|++++++||+
T Consensus       183 ~sK~~~E~~~~~~~~~~gi~~~ilRp~  209 (377)
T 2q1s_A          183 MSKIFGEFYSVYYHKQHQLPTVRARFQ  209 (377)
T ss_dssp             HHHHHHHHHHHHHHHHHCCCEEEEEEC
T ss_pred             HHHHHHHHHHHHHHHHhCCCEEEEeec
Confidence            999999999999998889999999995

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=99.95  E-value=5.8e-27  Score=194.35  Aligned_cols=159  Identities=19%  Similarity=0.202  Sum_probs=123.4

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~  144 (248)
                      +|++|||||+||||++++++|+++|++|++++|+..   ...+.+++.     .+.++.+|++|.+++++++++     +
T Consensus        27 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~---~~~~~~~~~-----~~~~~~~Dv~~~~~v~~~~~~~~~~~g   98 (260)
T 3gem_A           27 SAPILITGASQRVGLHCALRLLEHGHRVIISYRTEH---ASVTELRQA-----GAVALYGDFSCETGIMAFIDLLKTQTS   98 (260)
T ss_dssp             CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCC---HHHHHHHHH-----TCEEEECCTTSHHHHHHHHHHHHHHCS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChH---HHHHHHHhc-----CCeEEECCCCCHHHHHHHHHHHHHhcC
Confidence            389999999999999999999999999999997543   223333332     378899999999999988875     6


Q ss_pred             CCCEEEEcccccccCCCCCCch---hhHhhhHHHHH----HHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCC
Q 025786          145 AFDAVMHFAAVAYVGESTLDPL---KYYHNITSNTL----VVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (248)
Q Consensus       145 ~iD~li~~Ag~~~~~~~~~~~~---~~~~~~~~~~~----~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (248)
                      ++|+||||||+........+++   ..++.|+.++.    .+++.|++.+.++||++||..++.           +.++.
T Consensus        99 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~-----------~~~~~  167 (260)
T 3gem_A           99 SLRAVVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRK-----------GSSKH  167 (260)
T ss_dssp             CCSEEEECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGT-----------CCSSC
T ss_pred             CCCEEEECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcC-----------CCCCc
Confidence            8999999999865443222222   23445555544    456677777778999999987762           34457


Q ss_pred             ChHHHHHHHHHHHHHHHhhcC--CCcEEEEec
Q 025786          218 NPYGKAKKMAEDIILDFSKNS--DMAVLQCHR  247 (248)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~~~~~--gi~~~~v~P  247 (248)
                      ..|+.||++.+.+++.++.++  ++++++++|
T Consensus       168 ~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~P  199 (260)
T 3gem_A          168 IAYCATKAGLESLTLSFAARFAPLVKVNGIAP  199 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEE
T ss_pred             HhHHHHHHHHHHHHHHHHHHHCCCCEEEEEee
Confidence            799999999999999999885  499999998

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.95  E-value=7.7e-28  Score=201.98  Aligned_cols=179  Identities=16%  Similarity=0.121  Sum_probs=130.8

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCC---------cchhhhhhhhhcCCCCceEEEEccCCCHHHHHHH
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRG---------NIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKF  140 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~---------~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~  140 (248)
                      +|++|||||+||||++++++|+++|++|++++|+...         .+...+...++...+.++.++++|++|.++++++
T Consensus        10 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   89 (287)
T 3pxx_A           10 DKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAVSRE   89 (287)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHH
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHH
Confidence            3999999999999999999999999999999975221         1122222222222356789999999999999888


Q ss_pred             hhc-----CCCCEEEEcccccccCC--CCCCchhhHhhhHHHHHHHHHHHHHc--CCCEEEEeccceecCCCCCCCCCCC
Q 025786          141 FSE-----NAFDAVMHFAAVAYVGE--STLDPLKYYHNITSNTLVVLESMARH--GVDTLIYSSTCATYGEPEKMPITEE  211 (248)
Q Consensus       141 ~~~-----~~iD~li~~Ag~~~~~~--~~~~~~~~~~~~~~~~~~ll~~~~~~--~~~~iV~~SS~~~~g~~~~~~~~e~  211 (248)
                      +++     +++|+||||||+.....  ..+..+..++.|+.++.++...+...  +.++||++||...+......+..+.
T Consensus        90 ~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~  169 (287)
T 3pxx_A           90 LANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVAGLIAAAQPPGAGG  169 (287)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCHHHHHHHHCCC----
T ss_pred             HHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccchhcccccccccccc
Confidence            875     68999999999865431  12233455667777777777776653  3579999999877643222223333


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHhhcC---CCcEEEEecC
Q 025786          212 TPQAPINPYGKAKKMAEDIILDFSKNS---DMAVLQCHRF  248 (248)
Q Consensus       212 ~~~~~~~~Y~~sK~a~e~l~~~~~~~~---gi~~~~v~Pf  248 (248)
                      .+.++...|+.||++.+.+++.++.++   ||++++|+|.
T Consensus       170 ~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG  209 (287)
T 3pxx_A          170 PQGPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPT  209 (287)
T ss_dssp             -CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEES
T ss_pred             cCCCccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecC
Confidence            444556789999999999999999885   8999999993

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=99.95  E-value=1.3e-27  Score=198.52  Aligned_cols=167  Identities=15%  Similarity=0.133  Sum_probs=127.2

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~  144 (248)
                      +|++|||||++|||++++++|+++|++|++++|..++.+.+.+..+++...+.++.++++|++|.+++++++++     +
T Consensus        11 ~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   90 (262)
T 3ksu_A           11 NKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEKEFG   90 (262)
T ss_dssp             TCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHHHHC
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            39999999999999999999999999999998766555555555555544466899999999999999998875     6


Q ss_pred             CCCEEEEcccccccCCCCCCchh----hHhhhHHHHHHHHHHHHHc--CCCEEEEeccceecCCCCCCCCCCCCCCCCCC
Q 025786          145 AFDAVMHFAAVAYVGESTLDPLK----YYHNITSNTLVVLESMARH--GVDTLIYSSTCATYGEPEKMPITEETPQAPIN  218 (248)
Q Consensus       145 ~iD~li~~Ag~~~~~~~~~~~~~----~~~~~~~~~~~ll~~~~~~--~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~  218 (248)
                      ++|+||||||+.......+.+.+    .++.|+.++..+...+...  +.++||++||...+.           +.++..
T Consensus        91 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~-----------~~~~~~  159 (262)
T 3ksu_A           91 KVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATSLLAA-----------YTGFYS  159 (262)
T ss_dssp             SEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCCHHHH-----------HHCCCC
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEechhhcc-----------CCCCCc
Confidence            89999999998765443333333    3446666677777666553  457999999987663           223467


Q ss_pred             hHHHHHHHHHHHHHHHhhcC---CCcEEEEec
Q 025786          219 PYGKAKKMAEDIILDFSKNS---DMAVLQCHR  247 (248)
Q Consensus       219 ~Y~~sK~a~e~l~~~~~~~~---gi~~~~v~P  247 (248)
                      .|+.||++.+.+++.++.++   |+++++|+|
T Consensus       160 ~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~P  191 (262)
T 3ksu_A          160 TYAGNKAPVEHYTRAASKELMKQQISVNAIAP  191 (262)
T ss_dssp             C-----CHHHHHHHHHHHHTTTTTCEEEEEEE
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHcCcEEEEEee
Confidence            89999999999999999985   899999998

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=99.95  E-value=8.1e-27  Score=192.77  Aligned_cols=162  Identities=18%  Similarity=0.109  Sum_probs=125.5

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      |+++||||+||||++++++|+++|++|++++|+..  +...   +++...+.++.++.+|++|.+++++++++     ++
T Consensus         5 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~--~~~~---~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   79 (255)
T 2q2v_A            5 KTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP--APAL---AEIARHGVKAVHHPADLSDVAQIEALFALAEREFGG   79 (255)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC--HHHH---HHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHHSS
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch--HHHH---HHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            89999999999999999999999999999987543  2222   22222245788899999999999988875     58


Q ss_pred             CCEEEEcccccccCCCCCCchh----hHhhhHHH----HHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYVGESTLDPLK----YYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (248)
Q Consensus       146 iD~li~~Ag~~~~~~~~~~~~~----~~~~~~~~----~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (248)
                      +|+||||||+....+..+.+.+    .++.|+.+    ++.+++.|++++.++||++||..++.           +.++.
T Consensus        80 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~~  148 (255)
T 2q2v_A           80 VDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHGLV-----------GSTGK  148 (255)
T ss_dssp             CSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTS-----------CCTTB
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcCchhcc-----------CCCCc
Confidence            9999999998654333333333    34455553    45578888887778999999987763           23346


Q ss_pred             ChHHHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          218 NPYGKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                      ..|+.||++.+.+++.++.+   .|+++++++|.
T Consensus       149 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg  182 (255)
T 2q2v_A          149 AAYVAAKHGVVGLTKVVGLETATSNVTCNAICPG  182 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEES
T ss_pred             hhHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeC
Confidence            78999999999999999988   47999999993

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=99.95  E-value=2.7e-27  Score=198.07  Aligned_cols=166  Identities=16%  Similarity=0.117  Sum_probs=125.4

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~  144 (248)
                      +|++|||||+||||++++++|+++|++|++++|+....++..+.+...  .+.++.++++|++|.+++++++++     +
T Consensus        27 ~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g  104 (277)
T 4fc7_A           27 DKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGA--TGRRCLPLSMDVRAPPAVMAAVDQALKEFG  104 (277)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHH--HSSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh--cCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            499999999999999999999999999999997543332222222221  145789999999999999888875     6


Q ss_pred             CCCEEEEcccccccCCCCCCchh----hHhhhHHHHHH----HHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCC
Q 025786          145 AFDAVMHFAAVAYVGESTLDPLK----YYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (248)
Q Consensus       145 ~iD~li~~Ag~~~~~~~~~~~~~----~~~~~~~~~~~----ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~  216 (248)
                      ++|+||||||.....+..+.+.+    .++.|+.++.+    +++.|.+.+.++||++||..++.           +.++
T Consensus       105 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~  173 (277)
T 4fc7_A          105 RIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNR-----------GQAL  173 (277)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHHHH-----------TCTT
T ss_pred             CCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCC-----------CCCC
Confidence            89999999997654443333333    44555555544    45555556668999999987762           3344


Q ss_pred             CChHHHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          217 INPYGKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                      ...|+.||++.+.+++.++.+   +|+++++|+|-
T Consensus       174 ~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG  208 (277)
T 4fc7_A          174 QVHAGSAKAAVDAMTRHLAVEWGPQNIRVNSLAPG  208 (277)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred             cHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEEC
Confidence            678999999999999999988   48999999983

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=99.95  E-value=1.1e-26  Score=192.29  Aligned_cols=165  Identities=16%  Similarity=0.206  Sum_probs=125.0

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      |+++||||+||||++++++|+++|++|++++|+... ..+.+..+++...+.++.++.+|++|.+++++++++     ++
T Consensus         3 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   81 (258)
T 3a28_C            3 KVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQE-EQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLGG   81 (258)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGH-HHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHTC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcch-HHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            899999999999999999999999999999875432 002233333333345788999999999999888875     58


Q ss_pred             CCEEEEcccccccCCCCCCchh----hHhhhHHHHH----HHHHHHHHcCC-CEEEEeccceecCCCCCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYVGESTLDPLK----YYHNITSNTL----VVLESMARHGV-DTLIYSSTCATYGEPEKMPITEETPQAP  216 (248)
Q Consensus       146 iD~li~~Ag~~~~~~~~~~~~~----~~~~~~~~~~----~ll~~~~~~~~-~~iV~~SS~~~~g~~~~~~~~e~~~~~~  216 (248)
                      +|+||||||+....+..+.+.+    .++.|+.++.    .+++.|++++. ++||++||...+.           +.++
T Consensus        82 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~  150 (258)
T 3a28_C           82 FDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQ-----------GFPI  150 (258)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTS-----------CCTT
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhcc-----------CCCC
Confidence            9999999998654333232333    3445555544    45666666666 8999999987762           3345


Q ss_pred             CChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          217 INPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      ...|+.||++.+.+++.++.+   .|+++++++|
T Consensus       151 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~P  184 (258)
T 3a28_C          151 LSAYSTTKFAVRGLTQAAAQELAPKGHTVNAYAP  184 (258)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEE
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHhhCeEEEEEEC
Confidence            678999999999999999987   4899999999

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=99.95  E-value=5.1e-27  Score=200.60  Aligned_cols=167  Identities=17%  Similarity=0.161  Sum_probs=127.1

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCC--CcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSR--GNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----  143 (248)
                      |++|||||+||||++++++|+++|++|++++|+..  +.+.+.+..+.....+.++.++.+|++|.+++++++++     
T Consensus         6 k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~~   85 (324)
T 3u9l_A            6 KIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQIIGED   85 (324)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHc
Confidence            89999999999999999999999999999987532  22222222222222245789999999999999988875     


Q ss_pred             CCCCEEEEcccccccCCCCCCchh----hHhhhHHHHHH----HHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCC
Q 025786          144 NAFDAVMHFAAVAYVGESTLDPLK----YYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (248)
Q Consensus       144 ~~iD~li~~Ag~~~~~~~~~~~~~----~~~~~~~~~~~----ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~  215 (248)
                      +++|+||||||+....+..+.+.+    .++.|+.++..    +++.|++++.++||++||.+.+..          ..+
T Consensus        86 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g~iV~isS~~~~~~----------~~~  155 (324)
T 3u9l_A           86 GRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIWISSSSSAGG----------TPP  155 (324)
T ss_dssp             SCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC----------CCS
T ss_pred             CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEecchhccC----------CCC
Confidence            689999999998755443333333    34566666444    566678878889999999877631          123


Q ss_pred             CCChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          216 PINPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      ....|++||++++.+++.++.+   +|+++++|+|
T Consensus       156 ~~~~Y~asKaa~~~~~~~la~el~~~gI~v~~v~P  190 (324)
T 3u9l_A          156 YLAPYFAAKAAMDAIAVQYARELSRWGIETSIIVP  190 (324)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEE
T ss_pred             cchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEEC
Confidence            3568999999999999999988   6999999998

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=99.95  E-value=6.1e-27  Score=204.04  Aligned_cols=169  Identities=20%  Similarity=0.225  Sum_probs=139.4

Q ss_pred             CceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 025786           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (248)
Q Consensus        69 ~~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~  148 (248)
                      .||+||||||+||||++++++|+++|++|++++|.........         ..++.++.+|++|.+++.++++  ++|+
T Consensus        28 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---------~~~v~~~~~Dl~d~~~~~~~~~--~~d~   96 (379)
T 2c5a_A           28 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTED---------MFCDEFHLVDLRVMENCLKVTE--GVDH   96 (379)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGG---------GTCSEEEECCTTSHHHHHHHHT--TCSE
T ss_pred             cCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhhc---------cCCceEEECCCCCHHHHHHHhC--CCCE
Confidence            3589999999999999999999999999999998654322110         1357889999999999999987  7999


Q ss_pred             EEEcccccccCCC-CCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCCC-----CCCCCCC--CCCCCChH
Q 025786          149 VMHFAAVAYVGES-TLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEK-----MPITEET--PQAPINPY  220 (248)
Q Consensus       149 li~~Ag~~~~~~~-~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~-----~~~~e~~--~~~~~~~Y  220 (248)
                      ||||||....... ..++.+.++.|+.++.++++++.+.+.++||++||.++|+....     .+++|+.  +..+.+.|
T Consensus        97 Vih~A~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~~V~~SS~~v~~~~~~~~~~~~~~~E~~~~~~~~~~~Y  176 (379)
T 2c5a_A           97 VFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAF  176 (379)
T ss_dssp             EEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCSSHH
T ss_pred             EEECceecCcccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeehheeCCCCCCCccCCCcCcccCCCCCCCChh
Confidence            9999997532111 34567788899999999999999888889999999999975322     3466665  56778899


Q ss_pred             HHHHHHHHHHHHHHhhcCCCcEEEEecC
Q 025786          221 GKAKKMAEDIILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       221 ~~sK~a~e~l~~~~~~~~gi~~~~v~Pf  248 (248)
                      +.||.++|++++.++.++|++++++||+
T Consensus       177 ~~sK~~~E~~~~~~~~~~gi~~~ilrp~  204 (379)
T 2c5a_A          177 GLEKLATEELCKHYNKDFGIECRIGRFH  204 (379)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCEEEEEEEC
T ss_pred             HHHHHHHHHHHHHHHHHHCCCEEEEEeC
Confidence            9999999999999998899999999995

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=99.95  E-value=2.1e-27  Score=199.80  Aligned_cols=166  Identities=15%  Similarity=0.175  Sum_probs=127.4

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCC---EEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc---
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSY---RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE---  143 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~---  143 (248)
                      +|++|||||+||||++++++|+++|+   +|++++|+....++..+.+.... .+.++.++.+|++|.+++++++++   
T Consensus        33 ~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~~Dv~d~~~v~~~~~~~~~  111 (287)
T 3rku_A           33 KKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEF-PNAKVHVAQLDITQAEKIKPFIENLPQ  111 (287)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHC-TTCEEEEEECCTTCGGGHHHHHHTSCG
T ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhC-CCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            38999999999999999999999998   99999875443333333333221 145788999999999999999886   


Q ss_pred             --CCCCEEEEcccccc-cCCCCCCchh----hHhhhHHHH----HHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCC
Q 025786          144 --NAFDAVMHFAAVAY-VGESTLDPLK----YYHNITSNT----LVVLESMARHGVDTLIYSSTCATYGEPEKMPITEET  212 (248)
Q Consensus       144 --~~iD~li~~Ag~~~-~~~~~~~~~~----~~~~~~~~~----~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~  212 (248)
                        +++|+||||||+.. .....+.+.+    .++.|+.++    +.+++.|++++.++||++||.+++           .
T Consensus       112 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~-----------~  180 (287)
T 3rku_A          112 EFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGR-----------D  180 (287)
T ss_dssp             GGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGT-----------S
T ss_pred             hcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECChhhc-----------C
Confidence              58999999999764 2333333333    344555554    446677777778899999998776           2


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          213 PQAPINPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       213 ~~~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      +.++...|+.||++.+.+++.++.+   .||++++|+|
T Consensus       181 ~~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~P  218 (287)
T 3rku_A          181 AYPTGSIYCASKFAVGAFTDSLRKELINTKIRVILIAP  218 (287)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEE
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEeC
Confidence            3445778999999999999999998   5899999998

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=99.95  E-value=1.7e-27  Score=207.49  Aligned_cols=177  Identities=22%  Similarity=0.238  Sum_probs=139.6

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcc--hhhhhhhhhcCCCC-ceEEEEccCCCHHHHHHHhhcCCCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNI--GAVKVLQELFPEPG-RLQFIYADLGDAKAVNKFFSENAFD  147 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~--~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~iD  147 (248)
                      |+||||||+||||++++++|+++|++|++++|......  .............. ++.++.+|++|.+++.++++..++|
T Consensus        29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d  108 (381)
T 1n7h_A           29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKPD  108 (381)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhcCCC
Confidence            79999999999999999999999999999998654311  11111111100112 6889999999999999998765689


Q ss_pred             EEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCC-----CEEEEeccceecCCCCCCCCCCCCCCCCCChHHH
Q 025786          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV-----DTLIYSSTCATYGEPEKMPITEETPQAPINPYGK  222 (248)
Q Consensus       148 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~-----~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~  222 (248)
                      +||||||.........++...++.|+.++.++++++.+.+.     ++||++||.++||.... +++|+.+..|.+.|+.
T Consensus       109 ~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~vyg~~~~-~~~E~~~~~~~~~Y~~  187 (381)
T 1n7h_A          109 EVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPP-PQSETTPFHPRSPYAA  187 (381)
T ss_dssp             EEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCS-SBCTTSCCCCCSHHHH
T ss_pred             EEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHHHhCCCCC-CCCCCCCCCCCCchHH
Confidence            99999997543222335566788899999999999877543     39999999999987666 8899999899999999


Q ss_pred             HHHHHHHHHHHHhhcCCCcEEEEecC
Q 025786          223 AKKMAEDIILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       223 sK~a~e~l~~~~~~~~gi~~~~v~Pf  248 (248)
                      ||.++|.+++.++.++++++++++|+
T Consensus       188 sK~~~E~~~~~~~~~~~~~~~~~r~~  213 (381)
T 1n7h_A          188 SKCAAHWYTVNYREAYGLFACNGILF  213 (381)
T ss_dssp             HHHHHHHHHHHHHHHHCCEEEEEEEC
T ss_pred             HHHHHHHHHHHHHHHhCCcEEEEEeC
Confidence            99999999999999989998888875

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=99.95  E-value=4.9e-27  Score=196.82  Aligned_cols=166  Identities=16%  Similarity=0.186  Sum_probs=127.8

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~  144 (248)
                      +|++|||||+||||++++++|+++|++|++++|+..   .+.+..+++...+.++.++.+|++|.+++++++++     +
T Consensus         8 gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   84 (280)
T 3tox_A            8 GKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGN---ALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRFG   84 (280)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHH---HHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHH---HHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            399999999999999999999999999999886433   33344444444456889999999999999988875     6


Q ss_pred             CCCEEEEccccccc-CCCCCCc----hhhHhhhHHHHH----HHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCC
Q 025786          145 AFDAVMHFAAVAYV-GESTLDP----LKYYHNITSNTL----VVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (248)
Q Consensus       145 ~iD~li~~Ag~~~~-~~~~~~~----~~~~~~~~~~~~----~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~  215 (248)
                      ++|+||||||+... ....+.+    +..++.|+.++.    .+++.|++.+.++||++||..++.          .+.+
T Consensus        85 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~----------~~~~  154 (280)
T 3tox_A           85 GLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHT----------AGFA  154 (280)
T ss_dssp             CCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTTT----------BCCT
T ss_pred             CCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhCc----------CCCC
Confidence            89999999997632 2322222    334455655544    466677777778999999987752          1334


Q ss_pred             CCChHHHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          216 PINPYGKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                      +..+|+.||++.+.+++.++.+   .||++++|+|.
T Consensus       155 ~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG  190 (280)
T 3tox_A          155 GVAPYAASKAGLIGLVQALAVELGARGIRVNALLPG  190 (280)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEC
T ss_pred             CchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEEC
Confidence            5778999999999999999988   48999999993

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=99.95  E-value=3.5e-27  Score=195.21  Aligned_cols=161  Identities=14%  Similarity=0.109  Sum_probs=119.6

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      |++|||||+||||++++++|+++|++|++++|+....++..   +++   +.++.++++|++|.+++++++++     ++
T Consensus         8 k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~---~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   81 (257)
T 3tpc_A            8 RVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPA---AEL---GAAVRFRNADVTNEADATAALAFAKQEFGH   81 (257)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC------------------CEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHH---HHh---CCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            89999999999999999999999999999997654433222   222   34688999999999999988875     68


Q ss_pred             CCEEEEcccccccCCCC--------CCchhhHhhhHHHHHH----HHHHHHHc------CCCEEEEeccceecCCCCCCC
Q 025786          146 FDAVMHFAAVAYVGEST--------LDPLKYYHNITSNTLV----VLESMARH------GVDTLIYSSTCATYGEPEKMP  207 (248)
Q Consensus       146 iD~li~~Ag~~~~~~~~--------~~~~~~~~~~~~~~~~----ll~~~~~~------~~~~iV~~SS~~~~g~~~~~~  207 (248)
                      +|+||||||+.......        +..+..++.|+.++..    +++.|+++      +.++||++||...+.      
T Consensus        82 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~------  155 (257)
T 3tpc_A           82 VHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFD------  155 (257)
T ss_dssp             CCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHH------
T ss_pred             CCEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhcc------
Confidence            99999999986443211        1223345566666554    45555543      457899999988763      


Q ss_pred             CCCCCCCCCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          208 ITEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       208 ~~e~~~~~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                           +.++...|+.||++.+.+++.++.+   +|+++++++|.
T Consensus       156 -----~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG  194 (257)
T 3tpc_A          156 -----GQIGQAAYAASKGGVAALTLPAARELARFGIRVVTIAPG  194 (257)
T ss_dssp             -----CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred             -----CCCCCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeC
Confidence                 3345779999999999999999988   78999999993

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=99.95  E-value=1.1e-26  Score=192.52  Aligned_cols=161  Identities=16%  Similarity=0.182  Sum_probs=125.2

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      |+++||||+||||++++++|+++|++|++++|+..   ...+..+++.   .++.++++|++|.+++++++++     ++
T Consensus         8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~---~~~~~~~~~~---~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   81 (260)
T 1nff_A            8 KVALVSGGARGMGASHVRAMVAEGAKVVFGDILDE---EGKAMAAELA---DAARYVHLDVTQPAQWKAAVDTAVTAFGG   81 (260)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHH---HHHHHHHHTG---GGEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHH---HHHHHHHHhh---cCceEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            89999999999999999999999999999987532   2222222221   2478899999999999988875     58


Q ss_pred             CCEEEEcccccccCCCCCCch----hhHhhhHHHH----HHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYVGESTLDPL----KYYHNITSNT----LVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (248)
Q Consensus       146 iD~li~~Ag~~~~~~~~~~~~----~~~~~~~~~~----~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (248)
                      +|+||||||+....+..+.+.    ..++.|+.++    +.+++.|++++.++||++||..++.           +.++.
T Consensus        82 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~~  150 (260)
T 1nff_A           82 LHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLA-----------GTVAC  150 (260)
T ss_dssp             CCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS-----------CCTTB
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEeehhhcC-----------CCCCc
Confidence            999999999865443333333    3445566554    5577888877778999999988763           23346


Q ss_pred             ChHHHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          218 NPYGKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                      ..|+.||++.+.+++.++.+   .|+++++++|.
T Consensus       151 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg  184 (260)
T 1nff_A          151 HGYTATKFAVRGLTKSTALELGPSGIRVNSIHPG  184 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred             hhHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeC
Confidence            78999999999999999987   68999999994

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=99.95  E-value=1.7e-26  Score=198.98  Aligned_cols=169  Identities=17%  Similarity=0.158  Sum_probs=129.5

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcch----hhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc--
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIG----AVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE--  143 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~----~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--  143 (248)
                      +|++|||||++|||++++++|+++|++|++++|+..+.++    +.+..+++...+.++.++.+|++|++++++++++  
T Consensus        45 gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~  124 (346)
T 3kvo_A           45 GCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAVEKAI  124 (346)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHH
Confidence            3999999999999999999999999999999987654332    1222233323356789999999999999988875  


Q ss_pred             ---CCCCEEEEcccccccCCCCCCchh----hHhhhHHHHHH----HHHHHHHcCCCEEEEeccceecCCCCCCCCCCCC
Q 025786          144 ---NAFDAVMHFAAVAYVGESTLDPLK----YYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEET  212 (248)
Q Consensus       144 ---~~iD~li~~Ag~~~~~~~~~~~~~----~~~~~~~~~~~----ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~  212 (248)
                         +++|+||||||+.......+.+.+    .++.|+.++..    +++.|++++.++||++||...+..         .
T Consensus       125 ~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~~~~---------~  195 (346)
T 3kvo_A          125 KKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNP---------V  195 (346)
T ss_dssp             HHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCCCCG---------G
T ss_pred             HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHHcCC---------C
Confidence               689999999998765544444333    34556655444    566666677789999999776531         1


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHhhcC--CCcEEEEec
Q 025786          213 PQAPINPYGKAKKMAEDIILDFSKNS--DMAVLQCHR  247 (248)
Q Consensus       213 ~~~~~~~Y~~sK~a~e~l~~~~~~~~--gi~~~~v~P  247 (248)
                      +.++...|+.||++++.+++.++.++  ||++++|+|
T Consensus       196 ~~~~~~~Y~aSKaal~~l~~~la~e~~~gIrvn~v~P  232 (346)
T 3kvo_A          196 WFKQHCAYTIAKYGMSMYVLGMAEEFKGEIAVNALWP  232 (346)
T ss_dssp             GTSSSHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEEC
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHHhcCCcEEEEEeC
Confidence            13457789999999999999999985  799999998

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=99.95  E-value=9e-27  Score=196.25  Aligned_cols=166  Identities=17%  Similarity=0.184  Sum_probs=127.2

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~  144 (248)
                      +|++|||||+||||++++++|+++|++|++++|+....  .....+.+...+.++.++++|++|++++++++++     +
T Consensus        47 gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  124 (291)
T 3ijr_A           47 GKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGD--ANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQLG  124 (291)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHH--HHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHH--HHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            49999999999999999999999999999999754321  1112222223356789999999999999988875     6


Q ss_pred             CCCEEEEcccccccC-CCC----CCchhhHhhhHHHHHHHHHHHHHc--CCCEEEEeccceecCCCCCCCCCCCCCCCCC
Q 025786          145 AFDAVMHFAAVAYVG-EST----LDPLKYYHNITSNTLVVLESMARH--GVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (248)
Q Consensus       145 ~iD~li~~Ag~~~~~-~~~----~~~~~~~~~~~~~~~~ll~~~~~~--~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (248)
                      ++|+||||||..... ...    ++.+..++.|+.++..+++.+...  ..++||++||..++.           +.++.
T Consensus       125 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~~  193 (291)
T 3ijr_A          125 SLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIVAYE-----------GNETL  193 (291)
T ss_dssp             SCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTHHHH-----------CCTTC
T ss_pred             CCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechHhcC-----------CCCCC
Confidence            899999999976432 222    223445667777777777777653  346999999988763           23446


Q ss_pred             ChHHHHHHHHHHHHHHHhhcC---CCcEEEEecC
Q 025786          218 NPYGKAKKMAEDIILDFSKNS---DMAVLQCHRF  248 (248)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~~~~~---gi~~~~v~Pf  248 (248)
                      ..|+.||++.+.+++.++.++   |+++++|+|.
T Consensus       194 ~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG  227 (291)
T 3ijr_A          194 IDYSATKGAIVAFTRSLSQSLVQKGIRVNGVAPG  227 (291)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEEC
T ss_pred             hhHHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeC
Confidence            789999999999999999884   8999999984

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=99.95  E-value=8e-27  Score=193.30  Aligned_cols=164  Identities=20%  Similarity=0.205  Sum_probs=124.5

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      |+++||||+||||++++++|+++|++|++++|+..+   ..+..+++...+.++.++.+|++|.+++++++++     ++
T Consensus        15 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~---~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   91 (260)
T 2zat_A           15 KVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQEN---VDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHGG   91 (260)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHH---HHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHH---HHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            899999999999999999999999999999975432   2222222222245788899999999999888875     58


Q ss_pred             CCEEEEccccccc-CCCCCCc----hhhHhhhHHHH----HHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYV-GESTLDP----LKYYHNITSNT----LVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (248)
Q Consensus       146 iD~li~~Ag~~~~-~~~~~~~----~~~~~~~~~~~----~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~  216 (248)
                      +|+||||||.... ....+.+    +..++.|+.++    +.+++.|++++.++||++||..++.           +.++
T Consensus        92 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~  160 (260)
T 2zat_A           92 VDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYH-----------PFPN  160 (260)
T ss_dssp             CCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTS-----------CCTT
T ss_pred             CCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhhcC-----------CCCC
Confidence            9999999997532 2222222    23445565554    3466667777778999999988873           3345


Q ss_pred             CChHHHHHHHHHHHHHHHhhcC---CCcEEEEecC
Q 025786          217 INPYGKAKKMAEDIILDFSKNS---DMAVLQCHRF  248 (248)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~~~~~---gi~~~~v~Pf  248 (248)
                      ...|+.||++.+.+++.++.++   |+++++++|-
T Consensus       161 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg  195 (260)
T 2zat_A          161 LGPYNVSKTALLGLTKNLAVELAPRNIRVNCLAPG  195 (260)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred             chhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEEC
Confidence            6789999999999999999874   8999999983

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=99.95  E-value=5.2e-27  Score=194.48  Aligned_cols=165  Identities=16%  Similarity=0.089  Sum_probs=124.4

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCC-CCceEEEEccCCCHHHHHHHhhc-----C
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPE-PGRLQFIYADLGDAKAVNKFFSE-----N  144 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~-----~  144 (248)
                      |+++||||+||||++++++|+++|++|++++|+...  ...+..+++... +.++.++.+|++|.+++++++++     +
T Consensus         5 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   82 (260)
T 1x1t_A            5 KVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAA--EIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMG   82 (260)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHH--HHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHS
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcch--HHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            899999999999999999999999999999875432  022222222111 34688899999999999988875     6


Q ss_pred             CCCEEEEcccccccCCCCCCchh----hHhhhHHHH----HHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCC
Q 025786          145 AFDAVMHFAAVAYVGESTLDPLK----YYHNITSNT----LVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (248)
Q Consensus       145 ~iD~li~~Ag~~~~~~~~~~~~~----~~~~~~~~~----~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~  216 (248)
                      ++|+||||||+....+..+.+.+    .++.|+.++    +.+++.|++++.++||++||..++.           +.++
T Consensus        83 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~  151 (260)
T 1x1t_A           83 RIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLV-----------ASAN  151 (260)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS-----------CCTT
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHhCc-----------CCCC
Confidence            89999999997654333333333    344555553    3466777777778999999987763           2345


Q ss_pred             CChHHHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          217 INPYGKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                      ...|+.||++.+.+++.++.+   .|+++++++|.
T Consensus       152 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg  186 (260)
T 1x1t_A          152 KSAYVAAKHGVVGFTKVTALETAGQGITANAICPG  186 (260)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEEC
T ss_pred             CchHHHHHHHHHHHHHHHHHHhccCCEEEEEEeec
Confidence            678999999999999999987   48999999993

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=99.95  E-value=6.8e-27  Score=192.15  Aligned_cols=164  Identities=15%  Similarity=0.101  Sum_probs=126.8

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~  144 (248)
                      +|+++||||+||||++++++|+++|++|++++|+....++..+.+++   .+.++.++.+|++|.+++++++++     +
T Consensus         5 ~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (247)
T 3lyl_A            5 EKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKE---KGFKARGLVLNISDIESIQNFFAEIKAENL   81 (247)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHH---TTCCEEEEECCTTCHHHHHHHHHHHHHTTC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh---cCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            38999999999999999999999999999999754433333333332   345789999999999999988875     5


Q ss_pred             CCCEEEEcccccccCCCCCCc----hhhHhhhHHHHHH----HHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCC
Q 025786          145 AFDAVMHFAAVAYVGESTLDP----LKYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (248)
Q Consensus       145 ~iD~li~~Ag~~~~~~~~~~~----~~~~~~~~~~~~~----ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~  216 (248)
                      ++|+||||||+.......+.+    +..++.|+.++.+    +++.|.+++.++||++||...+.           +.++
T Consensus        82 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~  150 (247)
T 3lyl_A           82 AIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSA-----------GNPG  150 (247)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHH-----------CCTT
T ss_pred             CCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcc-----------CCCC
Confidence            799999999987544333323    3344556555444    56666677778999999987762           3345


Q ss_pred             CChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          217 INPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      ...|+.||++.+.+++.++.+   .|+++++++|
T Consensus       151 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~P  184 (247)
T 3lyl_A          151 QTNYCAAKAGVIGFSKSLAYEVASRNITVNVVAP  184 (247)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEee
Confidence            778999999999999999987   5899999998

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=99.95  E-value=1.1e-26  Score=191.95  Aligned_cols=161  Identities=18%  Similarity=0.169  Sum_probs=125.4

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      |+++||||+||||++++++|+++|++|++++|+.   +...+..+++   +.++.++.+|++|.+++++++++     ++
T Consensus         6 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~---~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   79 (254)
T 1hdc_A            6 KTVIITGGARGLGAEAARQAVAAGARVVLADVLD---EEGAATAREL---GDAARYQHLDVTIEEDWQRVVAYAREEFGS   79 (254)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH---HHHHHHHHTT---GGGEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH---HHHHHHHHHh---CCceeEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            8999999999999999999999999999998643   2222322322   34688899999999999888875     58


Q ss_pred             CCEEEEcccccccCCCCCCch----hhHhhhHHHH----HHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYVGESTLDPL----KYYHNITSNT----LVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (248)
Q Consensus       146 iD~li~~Ag~~~~~~~~~~~~----~~~~~~~~~~----~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (248)
                      +|+||||||+....+..+.+.    ..++.|+.++    +.+++.|++++.++||++||..++.           +.++.
T Consensus        80 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~~  148 (254)
T 1hdc_A           80 VDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLM-----------GLALT  148 (254)
T ss_dssp             CCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS-----------CCTTC
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhcc-----------CCCCc
Confidence            999999999765433222222    3345555554    3688888887778999999987763           23456


Q ss_pred             ChHHHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          218 NPYGKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                      ..|+.||++.+.+++.++.+   .|+++++++|.
T Consensus       149 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg  182 (254)
T 1hdc_A          149 SSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPG  182 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecc
Confidence            79999999999999999987   48999999994

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=99.95  E-value=1.3e-26  Score=192.61  Aligned_cols=165  Identities=18%  Similarity=0.159  Sum_probs=125.4

Q ss_pred             ceEEEEecCCc-hhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----
Q 025786           70 VTHVLVTGGAG-YIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (248)
Q Consensus        70 ~k~vlITGasg-~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----  143 (248)
                      +|+++||||+| |||++++++|+++|++|++++|+....++..+.+++.  ...++.++++|++|.+++++++++     
T Consensus        22 ~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   99 (266)
T 3o38_A           22 GKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADL--GLGRVEAVVCDVTSTEAVDALITQTVEKA   99 (266)
T ss_dssp             TCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT--CSSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhc--CCCceEEEEeCCCCHHHHHHHHHHHHHHh
Confidence            49999999986 8999999999999999999997543333333322221  235799999999999999988875     


Q ss_pred             CCCCEEEEcccccccCCCCCCchh----hHhhhHHHHHH----HHHHHHHc-CCCEEEEeccceecCCCCCCCCCCCCCC
Q 025786          144 NAFDAVMHFAAVAYVGESTLDPLK----YYHNITSNTLV----VLESMARH-GVDTLIYSSTCATYGEPEKMPITEETPQ  214 (248)
Q Consensus       144 ~~iD~li~~Ag~~~~~~~~~~~~~----~~~~~~~~~~~----ll~~~~~~-~~~~iV~~SS~~~~g~~~~~~~~e~~~~  214 (248)
                      +++|+||||||+.......+.+.+    .++.|+.++.+    +++.|++. +.++||++||...+           .+.
T Consensus       100 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~-----------~~~  168 (266)
T 3o38_A          100 GRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGW-----------RAQ  168 (266)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGT-----------CCC
T ss_pred             CCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHc-----------CCC
Confidence            689999999998655443333333    34455555444    55566655 56799999998776           244


Q ss_pred             CCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          215 APINPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       215 ~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      ++...|+.||++.+.+++.++.+   .|+++++++|
T Consensus       169 ~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~P  204 (266)
T 3o38_A          169 HSQSHYAAAKAGVMALTRCSAIEAVEFGVRINAVSP  204 (266)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHHHHcCcEEEEEeC
Confidence            56789999999999999999988   6899999998

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=99.95  E-value=8.1e-27  Score=192.63  Aligned_cols=160  Identities=18%  Similarity=0.221  Sum_probs=124.3

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      |+++||||+||||++++++|+++|++|++++|+.   +...+..+++   +.++.++++|++|.+++++++++     ++
T Consensus         7 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~---~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   80 (253)
T 1hxh_A            7 KVALVTGGASGVGLEVVKLLLGEGAKVAFSDINE---AAGQQLAAEL---GERSMFVRHDVSSEADWTLVMAAVQRRLGT   80 (253)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCH---HHHHHHHHHH---CTTEEEECCCTTCHHHHHHHHHHHHHHHCS
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCH---HHHHHHHHHc---CCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            8999999999999999999999999999998643   2233333333   34688999999999999888875     68


Q ss_pred             CCEEEEcccccccCCCCCCchhh----HhhhHHH----HHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYVGESTLDPLKY----YHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (248)
Q Consensus       146 iD~li~~Ag~~~~~~~~~~~~~~----~~~~~~~----~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (248)
                      +|+||||||+.......+.+.+.    ++.|..+    ++.+++.|++++ ++||++||..++.           +.++.
T Consensus        81 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~-----------~~~~~  148 (253)
T 1hxh_A           81 LNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-GSIINMASVSSWL-----------PIEQY  148 (253)
T ss_dssp             CCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-EEEEEECCGGGTS-----------CCTTB
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC-CEEEEEcchhhcC-----------CCCCC
Confidence            99999999986544433333333    3444443    445777887777 8999999988763           33456


Q ss_pred             ChHHHHHHHHHHHHHHHhhcC-----CCcEEEEecC
Q 025786          218 NPYGKAKKMAEDIILDFSKNS-----DMAVLQCHRF  248 (248)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~~~~~-----gi~~~~v~Pf  248 (248)
                      ..|+.||++.+.+++.++.++     |+++++++|.
T Consensus       149 ~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg  184 (253)
T 1hxh_A          149 AGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPD  184 (253)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEES
T ss_pred             ccHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEEeC
Confidence            789999999999999999873     8999999994

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.95  E-value=4e-27  Score=190.84  Aligned_cols=160  Identities=16%  Similarity=0.196  Sum_probs=131.3

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~l  149 (248)
                      ||+|+||||+|+||++++++|+++|++|++++|+..+...          ...++.++.+|++|.+++.++++  ++|+|
T Consensus         4 m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----------~~~~~~~~~~Dl~d~~~~~~~~~--~~d~v   71 (227)
T 3dhn_A            4 VKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKI----------ENEHLKVKKADVSSLDEVCEVCK--GADAV   71 (227)
T ss_dssp             CCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCC----------CCTTEEEECCCTTCHHHHHHHHT--TCSEE
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchh----------ccCceEEEEecCCCHHHHHHHhc--CCCEE
Confidence            5899999999999999999999999999999975433211          12478999999999999999998  69999


Q ss_pred             EEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCCChHHHHHHHHHH
Q 025786          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAED  229 (248)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e~  229 (248)
                      |||||....      ..+.++.|..++.++++++.+.+.++||++||.++++..... ..++.+..|.+.|+.+|.++|.
T Consensus        72 i~~a~~~~~------~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~-~~~~~~~~p~~~Y~~sK~~~e~  144 (227)
T 3dhn_A           72 ISAFNPGWN------NPDIYDETIKVYLTIIDGVKKAGVNRFLMVGGAGSLFIAPGL-RLMDSGEVPENILPGVKALGEF  144 (227)
T ss_dssp             EECCCC------------CCSHHHHHHHHHHHHHHHTTCSEEEEECCSTTSEEETTE-EGGGTTCSCGGGHHHHHHHHHH
T ss_pred             EEeCcCCCC------ChhHHHHHHHHHHHHHHHHHHhCCCEEEEeCChhhccCCCCC-ccccCCcchHHHHHHHHHHHHH
Confidence            999986421      123677889999999999999988899999998876543322 2445667788899999999999


Q ss_pred             HHHHHhhcCCCcEEEEecC
Q 025786          230 IILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       230 l~~~~~~~~gi~~~~v~Pf  248 (248)
                      +++.++++.+++++++||.
T Consensus       145 ~~~~~~~~~~~~~~ilrp~  163 (227)
T 3dhn_A          145 YLNFLMKEKEIDWVFFSPA  163 (227)
T ss_dssp             HHHTGGGCCSSEEEEEECC
T ss_pred             HHHHHhhccCccEEEEeCC
Confidence            9999998899999999994

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=99.95  E-value=1.8e-26  Score=193.02  Aligned_cols=163  Identities=20%  Similarity=0.178  Sum_probs=124.3

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~  144 (248)
                      +|+++||||+||||++++++|+++|++|++++|+..   ...+..+++...+ ++.++.+|++|.+++++++++     +
T Consensus        29 ~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~---~~~~~~~~l~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g  104 (276)
T 2b4q_A           29 GRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAE---ACADTATRLSAYG-DCQAIPADLSSEAGARRLAQALGELSA  104 (276)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHH---HHHHHHHHHTTSS-CEEECCCCTTSHHHHHHHHHHHHHHCS
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHH---HHHHHHHHHHhcC-ceEEEEeeCCCHHHHHHHHHHHHHhcC
Confidence            389999999999999999999999999999986432   2333333332222 788899999999999888875     5


Q ss_pred             CCCEEEEcccccccCCCCCCc----hhhHhhhHHHH----HHHHHHHHHcCC----CEEEEeccceecCCCCCCCCCCCC
Q 025786          145 AFDAVMHFAAVAYVGESTLDP----LKYYHNITSNT----LVVLESMARHGV----DTLIYSSTCATYGEPEKMPITEET  212 (248)
Q Consensus       145 ~iD~li~~Ag~~~~~~~~~~~----~~~~~~~~~~~----~~ll~~~~~~~~----~~iV~~SS~~~~g~~~~~~~~e~~  212 (248)
                      ++|+||||||+.......+.+    +..++.|+.++    +.+++.|++++.    ++||++||.+++.           
T Consensus       105 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~-----------  173 (276)
T 2b4q_A          105 RLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGIS-----------  173 (276)
T ss_dssp             CCSEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTC-----------
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcC-----------
Confidence            899999999986544333333    23445565554    456777766665    7999999988763           


Q ss_pred             CCCCCC-hHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          213 PQAPIN-PYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       213 ~~~~~~-~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      +.++.. .|+.||++.+.+++.++.+   .|+++++++|
T Consensus       174 ~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~vn~v~P  212 (276)
T 2b4q_A          174 AMGEQAYAYGPSKAALHQLSRMLAKELVGEHINVNVIAP  212 (276)
T ss_dssp             CCCCSCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE
T ss_pred             CCCCCccccHHHHHHHHHHHHHHHHHhcccCeEEEEEEe
Confidence            222345 8999999999999999987   4899999998

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=99.95  E-value=1.1e-26  Score=198.67  Aligned_cols=162  Identities=26%  Similarity=0.382  Sum_probs=130.8

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li  150 (248)
                      |+||||||+||||++++++|+++|++|++++|......+   ..+.    ..++.++.+|++|.+++.+++++.++|+||
T Consensus        21 ~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~~~~----l~~v~~~~~Dl~d~~~~~~~~~~~~~D~vi   93 (330)
T 2pzm_A           21 MRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKRE---VLPP----VAGLSVIEGSVTDAGLLERAFDSFKPTHVV   93 (330)
T ss_dssp             CEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGG---GSCS----CTTEEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchh---hhhc----cCCceEEEeeCCCHHHHHHHHhhcCCCEEE
Confidence            899999999999999999999999999999985433221   1111    136888999999999999988754689999


Q ss_pred             EcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCCCC--CCCCCCCCCCCChHHHHHHHHH
Q 025786          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKM--PITEETPQAPINPYGKAKKMAE  228 (248)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~--~~~e~~~~~~~~~Y~~sK~a~e  228 (248)
                      ||||..... ...+ .+ ++.|+.++.++++++.+.+.++||++||.++|+.....  +++|+.  .+.+.|+.||.++|
T Consensus        94 h~A~~~~~~-~~~~-~~-~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~~~~~~~~~~~~E~~--~~~~~Y~~sK~~~e  168 (330)
T 2pzm_A           94 HSAAAYKDP-DDWA-ED-AATNVQGSINVAKAASKAGVKRLLNFQTALCYGRPATVPIPIDSPT--APFTSYGISKTAGE  168 (330)
T ss_dssp             ECCCCCSCT-TCHH-HH-HHHHTHHHHHHHHHHHHHTCSEEEEEEEGGGGCSCSSSSBCTTCCC--CCCSHHHHHHHHHH
T ss_pred             ECCccCCCc-cccC-hh-HHHHHHHHHHHHHHHHHcCCCEEEEecCHHHhCCCccCCCCcCCCC--CCCChHHHHHHHHH
Confidence            999976432 1222 22 78888999999999998888899999999999865443  677776  67889999999999


Q ss_pred             HHHHHHhhcCCCcEEEEecC
Q 025786          229 DIILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       229 ~l~~~~~~~~gi~~~~v~Pf  248 (248)
                      ++++.+    +++.+++||+
T Consensus       169 ~~~~~~----~~~~~~iR~~  184 (330)
T 2pzm_A          169 AFLMMS----DVPVVSLRLA  184 (330)
T ss_dssp             HHHHTC----SSCEEEEEEC
T ss_pred             HHHHHc----CCCEEEEeee
Confidence            999876    7888999974

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=99.95  E-value=7e-27  Score=191.07  Aligned_cols=160  Identities=16%  Similarity=0.187  Sum_probs=120.0

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~  144 (248)
                      +|++|||||+||||++++++|+++|++|++++|+..   .+.+..+++   +.++.++.+|++|.+++++++++     +
T Consensus         3 ~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~---~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   76 (235)
T 3l6e_A            3 LGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQ---RLQQQELLL---GNAVIGIVADLAHHEDVDVAFAAAVEWGG   76 (235)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHH---HHHHHHHHH---GGGEEEEECCTTSHHHHHHHHHHHHHHHC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHH---HHHHHHHHh---cCCceEEECCCCCHHHHHHHHHHHHHhcC
Confidence            389999999999999999999999999999997533   233333333   22588999999999999988875     6


Q ss_pred             CCCEEEEcccccccCCCCCCch----hhHhhhHHHHHH----HHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCC
Q 025786          145 AFDAVMHFAAVAYVGESTLDPL----KYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (248)
Q Consensus       145 ~iD~li~~Ag~~~~~~~~~~~~----~~~~~~~~~~~~----ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~  216 (248)
                      ++|+||||||+....+..+.+.    ..++.|+.++..    +++.|++++ ++||++||...+.           +.++
T Consensus        77 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~iv~isS~~~~~-----------~~~~  144 (235)
T 3l6e_A           77 LPELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERG-GVLANVLSSAAQV-----------GKAN  144 (235)
T ss_dssp             SCSEEEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC-EEEEEECCEECCS-----------SCSS
T ss_pred             CCcEEEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEEeCHHhcC-----------CCCC
Confidence            8999999999865444333333    344556666544    555565554 4999999987762           3344


Q ss_pred             CChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          217 INPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      ...|+.||++.+.+++.++.+   .|+++++++|
T Consensus       145 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~P  178 (235)
T 3l6e_A          145 ESLYCASKWGMRGFLESLRAELKDSPLRLVNLYP  178 (235)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEE
T ss_pred             CcHHHHHHHHHHHHHHHHHHHhhccCCEEEEEeC
Confidence            678999999999999999987   4799999998

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.95  E-value=1.1e-26  Score=192.04  Aligned_cols=157  Identities=20%  Similarity=0.232  Sum_probs=121.7

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      |+++||||+||||++++++|+++|++|++++|+...    .+..+++.    + .++++|++|.+++++++++     ++
T Consensus         7 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~----~~~~~~~~----~-~~~~~D~~~~~~~~~~~~~~~~~~g~   77 (256)
T 2d1y_A            7 KGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG----KEVAEAIG----G-AFFQVDLEDERERVRFVEEAAYALGR   77 (256)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH----HHHHHHHT----C-EEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH----HHHHHHhh----C-CEEEeeCCCHHHHHHHHHHHHHHcCC
Confidence            899999999999999999999999999999975433    22223331    3 7789999999999888875     68


Q ss_pred             CCEEEEcccccccCCCCCCch----hhHhhhHHHHHH----HHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYVGESTLDPL----KYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (248)
Q Consensus       146 iD~li~~Ag~~~~~~~~~~~~----~~~~~~~~~~~~----ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (248)
                      +|+||||||+.......+.+.    ..++.|+.++.+    +++.|++++.++||++||..++.           +.++.
T Consensus        78 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~-----------~~~~~  146 (256)
T 2d1y_A           78 VDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLF-----------AEQEN  146 (256)
T ss_dssp             CCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTS-----------BCTTB
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccccC-----------CCCCC
Confidence            999999999865444333333    344556655544    46666666778999999987652           23446


Q ss_pred             ChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          218 NPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      ..|+.||++.+.+++.++.+   .|+++++++|
T Consensus       147 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~P  179 (256)
T 2d1y_A          147 AAYNASKGGLVNLTRSLALDLAPLRIRVNAVAP  179 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE
T ss_pred             hhHHHHHHHHHHHHHHHHHHHhhcCeEEEEEee
Confidence            78999999999999999987   4899999998

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=99.95  E-value=1.1e-26  Score=192.83  Aligned_cols=163  Identities=16%  Similarity=0.157  Sum_probs=123.8

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      |+++||||+||||++++++|+++|++|++++|+...   ..+..+++...+.++.++.+|++|++++++++++     ++
T Consensus         8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~---~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   84 (262)
T 1zem_A            8 KVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREA---LEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGK   84 (262)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHH---HHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH---HHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            899999999999999999999999999999875432   2233333333345788999999999999888875     68


Q ss_pred             CCEEEEccccc-ccCCCCCCch----hhHhhhHHHHH----HHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVA-YVGESTLDPL----KYYHNITSNTL----VVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (248)
Q Consensus       146 iD~li~~Ag~~-~~~~~~~~~~----~~~~~~~~~~~----~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~  216 (248)
                      +|+||||||+. ...+..+.+.    ..++.|+.++.    .+++.|.+++.++||++||..++.           +.++
T Consensus        85 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~  153 (262)
T 1zem_A           85 IDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVK-----------GPPN  153 (262)
T ss_dssp             CCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHS-----------CCTT
T ss_pred             CCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcc-----------CCCC
Confidence            99999999976 3333222233    33445555544    456667666778999999987763           2334


Q ss_pred             CChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          217 INPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      ...|+.||++.+.+++.++.+   +|+++++|+|
T Consensus       154 ~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~P  187 (262)
T 1zem_A          154 MAAYGTSKGAIIALTETAALDLAPYNIRVNAISP  187 (262)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE
T ss_pred             CchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEec
Confidence            678999999999999999977   5899999999

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=99.95  E-value=1.6e-26  Score=191.67  Aligned_cols=158  Identities=12%  Similarity=0.096  Sum_probs=124.3

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~  144 (248)
                      +|++|||||+||||++++++|+++|++|++++|+.....            ..++.++.+|++|++++++++++     +
T Consensus        28 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~------------~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   95 (260)
T 3un1_A           28 QKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSA------------DPDIHTVAGDISKPETADRIVREGIERFG   95 (260)
T ss_dssp             CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCS------------STTEEEEESCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhcc------------cCceEEEEccCCCHHHHHHHHHHHHHHCC
Confidence            389999999999999999999999999999997543221            23688999999999999988875     6


Q ss_pred             CCCEEEEcccccccCCCCCCchh----hHhhhHHHHHH----HHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCC
Q 025786          145 AFDAVMHFAAVAYVGESTLDPLK----YYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (248)
Q Consensus       145 ~iD~li~~Ag~~~~~~~~~~~~~----~~~~~~~~~~~----ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~  216 (248)
                      ++|+||||||+....+..+.+.+    .++.|+.++..    +++.|++++.++||++||...+..         .+..+
T Consensus        96 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~---------~~~~~  166 (260)
T 3un1_A           96 RIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVDQP---------MVGMP  166 (260)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCTTTTSC---------BTTCC
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechhhccC---------CCCCc
Confidence            89999999998755443333333    34456655444    556667777789999999766531         12345


Q ss_pred             CChHHHHHHHHHHHHHHHhhcC---CCcEEEEecC
Q 025786          217 INPYGKAKKMAEDIILDFSKNS---DMAVLQCHRF  248 (248)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~~~~~---gi~~~~v~Pf  248 (248)
                      ...|+.||++.+.+++.++.++   |+++++|+|.
T Consensus       167 ~~~Y~~sKaa~~~l~~~la~e~~~~gI~vn~v~PG  201 (260)
T 3un1_A          167 SALASLTKGGLNAVTRSLAMEFSRSGVRVNAVSPG  201 (260)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEEC
T ss_pred             cHHHHHHHHHHHHHHHHHHHHhCcCCeEEEEEeec
Confidence            6789999999999999999996   8999999994

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=99.95  E-value=2.1e-26  Score=189.74  Aligned_cols=160  Identities=18%  Similarity=0.219  Sum_probs=123.2

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      |+++||||+||||++++++|+++|++|++++|+.   +.+.+..+++   ..++.++.+|++|.+++++++++     ++
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~---~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   74 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQ---ERLQELKDEL---GDNLYIAQLDVRNRAAIEEMLASLPAEWCN   74 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCH---HHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHTSCTTTCC
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCH---HHHHHHHHHh---cCceEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            5799999999999999999999999999998643   2233333333   24688999999999999999875     58


Q ss_pred             CCEEEEcccccc-cCCCCCCc----hhhHhhhHHHH----HHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAY-VGESTLDP----LKYYHNITSNT----LVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (248)
Q Consensus       146 iD~li~~Ag~~~-~~~~~~~~----~~~~~~~~~~~----~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~  216 (248)
                      +|+||||||+.. ..+..+.+    +..++.|+.++    +.+++.|++++.++||++||.+++.           +.++
T Consensus        75 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~-----------~~~~  143 (248)
T 3asu_A           75 IDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSW-----------PYAG  143 (248)
T ss_dssp             CCEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTS-----------CCTT
T ss_pred             CCEEEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEccchhcc-----------CCCC
Confidence            999999999753 22222222    33445555553    4466777777778999999987762           3345


Q ss_pred             CChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          217 INPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      ...|+.||++.+.+++.++.+   .|+++++|+|
T Consensus       144 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~P  177 (248)
T 3asu_A          144 GNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEP  177 (248)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEE
T ss_pred             CchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEec
Confidence            679999999999999999988   4899999998

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=99.95  E-value=1.2e-26  Score=193.68  Aligned_cols=161  Identities=16%  Similarity=0.169  Sum_probs=125.4

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~  144 (248)
                      +|++|||||+||||++++++|+++|++|++++|+.   +.+.+..+++   +.++.++++|++|.+++++++++     +
T Consensus        28 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~---~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  101 (272)
T 4dyv_A           28 KKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRL---DALQETAAEI---GDDALCVPTDVTDPDSVRALFTATVEKFG  101 (272)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCH---HHHHHHHHHH---TSCCEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCH---HHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            48999999999999999999999999999998643   3333333444   25788999999999999988875     6


Q ss_pred             CCCEEEEccccccc-CCCCCCch----hhHhhhHHH----HHHHHHHHHHcC--CCEEEEeccceecCCCCCCCCCCCCC
Q 025786          145 AFDAVMHFAAVAYV-GESTLDPL----KYYHNITSN----TLVVLESMARHG--VDTLIYSSTCATYGEPEKMPITEETP  213 (248)
Q Consensus       145 ~iD~li~~Ag~~~~-~~~~~~~~----~~~~~~~~~----~~~ll~~~~~~~--~~~iV~~SS~~~~g~~~~~~~~e~~~  213 (248)
                      ++|+||||||+... .+..+.+.    ..++.|+.+    ++.+++.|++++  .++||++||..++           .+
T Consensus       102 ~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~-----------~~  170 (272)
T 4dyv_A          102 RVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISAT-----------SP  170 (272)
T ss_dssp             CCCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTT-----------SC
T ss_pred             CCCEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhc-----------CC
Confidence            89999999998643 23222233    344556555    445677777765  5799999997776           24


Q ss_pred             CCCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          214 QAPINPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       214 ~~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      .++...|+.||++.+.+++.++.+   .|+++++|+|
T Consensus       171 ~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~P  207 (272)
T 4dyv_A          171 RPYSAPYTATKHAITGLTKSTSLDGRVHDIACGQIDI  207 (272)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEE
Confidence            455778999999999999999988   5899999998

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=99.95  E-value=1.1e-26  Score=192.10  Aligned_cols=164  Identities=20%  Similarity=0.210  Sum_probs=124.0

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      |+++||||+||||++++++|+++|++|++++|+....++.   .+++...+.++.++++|++|.+++++++++     ++
T Consensus         3 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~---~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   79 (256)
T 1geg_A            3 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAV---ASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGG   79 (256)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH---HHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTC
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHH---HHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            8999999999999999999999999999999754322222   222222245788999999999999988875     58


Q ss_pred             CCEEEEcccccccCCCCCCchh----hHhhhHHHH----HHHHHHHHHcC-CCEEEEeccceecCCCCCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYVGESTLDPLK----YYHNITSNT----LVVLESMARHG-VDTLIYSSTCATYGEPEKMPITEETPQAP  216 (248)
Q Consensus       146 iD~li~~Ag~~~~~~~~~~~~~----~~~~~~~~~----~~ll~~~~~~~-~~~iV~~SS~~~~g~~~~~~~~e~~~~~~  216 (248)
                      +|+||||||+....+..+.+.+    .++.|+.++    +.+++.|++++ .++||++||...+.           +.++
T Consensus        80 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~  148 (256)
T 1geg_A           80 FDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHV-----------GNPE  148 (256)
T ss_dssp             CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS-----------CCTT
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcC-----------CCCC
Confidence            9999999997654333332333    344555554    44677777766 67999999977652           2334


Q ss_pred             CChHHHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          217 INPYGKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                      ...|+.||++.+.+++.++.+   +|+++++++|-
T Consensus       149 ~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG  183 (256)
T 1geg_A          149 LAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPG  183 (256)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEEC
Confidence            678999999999999999987   58999999993

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=99.95  E-value=7.2e-27  Score=195.91  Aligned_cols=165  Identities=18%  Similarity=0.172  Sum_probs=124.7

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~  144 (248)
                      +|++|||||+||||++++++|+++|++|++++|+....++..+.+.+..  ...+.++++|++|.+++++++++     +
T Consensus        33 gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  110 (281)
T 4dry_A           33 GRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRT--GNIVRAVVCDVGDPDQVAALFAAVRAEFA  110 (281)
T ss_dssp             -CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH--SSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC--CCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            3999999999999999999999999999999975433333333332221  22358899999999999988875     6


Q ss_pred             CCCEEEEccccccc-CCCCCCchh----hHhhhHHH----HHHHHHHHHHcC--CCEEEEeccceecCCCCCCCCCCCCC
Q 025786          145 AFDAVMHFAAVAYV-GESTLDPLK----YYHNITSN----TLVVLESMARHG--VDTLIYSSTCATYGEPEKMPITEETP  213 (248)
Q Consensus       145 ~iD~li~~Ag~~~~-~~~~~~~~~----~~~~~~~~----~~~ll~~~~~~~--~~~iV~~SS~~~~g~~~~~~~~e~~~  213 (248)
                      ++|+||||||+... ....+.+.+    .++.|+.+    ++.+++.|++++  .++||++||...+           .+
T Consensus       111 ~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~-----------~~  179 (281)
T 4dry_A          111 RLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQ-----------TP  179 (281)
T ss_dssp             CCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGT-----------CC
T ss_pred             CCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhC-----------CC
Confidence            89999999998543 232233333    44455555    445677777764  5799999998775           24


Q ss_pred             CCCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          214 QAPINPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       214 ~~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      .++...|+.||++.+.+++.++.|   +|+++++|+|
T Consensus       180 ~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~P  216 (281)
T 4dry_A          180 RPNSAPYTATKHAITGLTKSTALDGRMHDIACGQIDI  216 (281)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE
T ss_pred             CCCChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEE
Confidence            455789999999999999999987   6899999998

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=99.95  E-value=8.8e-27  Score=192.16  Aligned_cols=162  Identities=18%  Similarity=0.179  Sum_probs=118.5

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~  144 (248)
                      +|++|||||+||||++++++|+++|++|++++|+....++.   .+++...+.++.++.+|++|.+++++++++     +
T Consensus         9 ~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~---~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   85 (253)
T 3qiv_A            9 NKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAV---AKQIVADGGTAISVAVDVSDPESAKAMADRTLAEFG   85 (253)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH---HHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHH---HHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            39999999999999999999999999999999754333333   333322346789999999999999988875     5


Q ss_pred             CCCEEEEcccccc---cCCCCCC----chhhHhhhHHH----HHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCC
Q 025786          145 AFDAVMHFAAVAY---VGESTLD----PLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETP  213 (248)
Q Consensus       145 ~iD~li~~Ag~~~---~~~~~~~----~~~~~~~~~~~----~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~  213 (248)
                      ++|+||||||+..   .....+.    .+..++.|+.+    ++.+++.|++++.++||++||...+.            
T Consensus        86 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~------------  153 (253)
T 3qiv_A           86 GIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAWL------------  153 (253)
T ss_dssp             CCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC-----------------
T ss_pred             CCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEECCccccC------------
Confidence            8999999999832   2222222    23345566666    55678888888788999999987762            


Q ss_pred             CCCCChHHHHHHHHHHHHHHHhhcC---CCcEEEEecC
Q 025786          214 QAPINPYGKAKKMAEDIILDFSKNS---DMAVLQCHRF  248 (248)
Q Consensus       214 ~~~~~~Y~~sK~a~e~l~~~~~~~~---gi~~~~v~Pf  248 (248)
                        +...|+.||++.+.+++.++.++   |+++++++|.
T Consensus       154 --~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG  189 (253)
T 3qiv_A          154 --YSNYYGLAKVGINGLTQQLSRELGGRNIRINAIAPG  189 (253)
T ss_dssp             --------CCHHHHHHHHHHHHHHTTTTTEEEEEEEC-
T ss_pred             --CCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEec
Confidence              24579999999999999999985   7999999983

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=99.95  E-value=2.3e-26  Score=191.96  Aligned_cols=162  Identities=16%  Similarity=0.233  Sum_probs=125.0

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      |++|||||+||||++++++|+++|++|++++|+..   .+.+..+++... .++.++.+|++|.+++++++++     ++
T Consensus        22 k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~---~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   97 (272)
T 2nwq_A           22 STLFITGATSGFGEACARRFAEAGWSLVLTGRREE---RLQALAGELSAK-TRVLPLTLDVRDRAAMSAAVDNLPEEFAT   97 (272)
T ss_dssp             CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHH---HHHHHHHHHTTT-SCEEEEECCTTCHHHHHHHHHTCCGGGSS
T ss_pred             cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHH---HHHHHHHHhhcC-CcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            79999999999999999999999999999987432   233333333222 4688999999999999999876     57


Q ss_pred             CCEEEEccccccc-CCCCCCch----hhHhhhHHH----HHHHHHHHHHcCCC-EEEEeccceecCCCCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYV-GESTLDPL----KYYHNITSN----TLVVLESMARHGVD-TLIYSSTCATYGEPEKMPITEETPQA  215 (248)
Q Consensus       146 iD~li~~Ag~~~~-~~~~~~~~----~~~~~~~~~----~~~ll~~~~~~~~~-~iV~~SS~~~~g~~~~~~~~e~~~~~  215 (248)
                      +|+||||||+... .+..+.+.    ..++.|+.+    ++.+++.|++++.+ +||++||...+.           +.+
T Consensus        98 iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS~~~~~-----------~~~  166 (272)
T 2nwq_A           98 LRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKW-----------PYP  166 (272)
T ss_dssp             CCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGTS-----------CCT
T ss_pred             CCEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchhcc-----------CCC
Confidence            9999999997642 33222222    334455555    44577788777777 999999987762           334


Q ss_pred             CCChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          216 PINPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      +...|+.||++.+.+++.++.+   +|+++++|+|
T Consensus       167 ~~~~Y~asKaa~~~l~~~la~el~~~gIrvn~v~P  201 (272)
T 2nwq_A          167 GSHVYGGTKAFVEQFSLNLRCDLQGTGVRVTNLEP  201 (272)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHTTCTTSCCEEEEEEE
T ss_pred             CCchHHHHHHHHHHHHHHHHHHhCccCeEEEEEEc
Confidence            4678999999999999999987   4799999998

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=99.95  E-value=1.5e-26  Score=190.42  Aligned_cols=161  Identities=16%  Similarity=0.104  Sum_probs=122.3

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-CCCCE
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-NAFDA  148 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-~~iD~  148 (248)
                      .|+||||||+||||++++++|+++|++|++++|+.   +.+.+..+++   ..++.++.+|++|.+++.+++++ +++|+
T Consensus        14 ~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~---~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~id~   87 (249)
T 3f9i_A           14 GKTSLITGASSGIGSAIARLLHKLGSKVIISGSNE---EKLKSLGNAL---KDNYTIEVCNLANKEECSNLISKTSNLDI   87 (249)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCH---HHHHHHHHHH---CSSEEEEECCTTSHHHHHHHHHTCSCCSE
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCH---HHHHHHHHHh---ccCccEEEcCCCCHHHHHHHHHhcCCCCE
Confidence            49999999999999999999999999999999643   2333333333   24688899999999999999987 57999


Q ss_pred             EEEcccccccCC----CCCCchhhHhhhHHHHHH----HHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCCChH
Q 025786          149 VMHFAAVAYVGE----STLDPLKYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPY  220 (248)
Q Consensus       149 li~~Ag~~~~~~----~~~~~~~~~~~~~~~~~~----ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y  220 (248)
                      ||||||+.....    ..+..+..++.|+.++..    +++.|.+.+.++||++||..++.           +.++...|
T Consensus        88 li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~~~~Y  156 (249)
T 3f9i_A           88 LVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIA-----------GNPGQANY  156 (249)
T ss_dssp             EEECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC-------------CCSCSHHH
T ss_pred             EEECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhcc-----------CCCCCchh
Confidence            999999865432    223445566677766544    56666777778999999987763           34457789


Q ss_pred             HHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          221 GKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       221 ~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      +.||++.+.+++.++.+   .|+++++++|
T Consensus       157 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~P  186 (249)
T 3f9i_A          157 CASKAGLIGMTKSLSYEVATRGITVNAVAP  186 (249)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEE
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCcEEEEEec
Confidence            99999999999999987   5899999998

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=99.95  E-value=9.3e-27  Score=194.14  Aligned_cols=165  Identities=14%  Similarity=0.062  Sum_probs=126.4

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~  144 (248)
                      +|+|+||||+||||++++++|+++|++|++++|....  ......+.+...+.++.++++|++|.+++.+++++     +
T Consensus        29 ~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g  106 (271)
T 4iin_A           29 GKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAE--VADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQSDG  106 (271)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHH--HHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHH--HHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            3899999999999999999999999999999974322  12222222222345789999999999999988875     6


Q ss_pred             CCCEEEEcccccccCCCCCCc----hhhHhhhHHHH----HHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCC
Q 025786          145 AFDAVMHFAAVAYVGESTLDP----LKYYHNITSNT----LVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (248)
Q Consensus       145 ~iD~li~~Ag~~~~~~~~~~~----~~~~~~~~~~~----~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~  216 (248)
                      ++|+||||||+.......+.+    +..++.|+.++    +.+++.|++.+.++||++||...+.           +.++
T Consensus       107 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~  175 (271)
T 4iin_A          107 GLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGER-----------GNMG  175 (271)
T ss_dssp             SCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH-----------CCTT
T ss_pred             CCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhhcC-----------CCCC
Confidence            899999999987554433322    33445555554    4467777777778999999987762           3445


Q ss_pred             CChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          217 INPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      ...|+.||++.+.+++.++.+   .|+++++++|
T Consensus       176 ~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~P  209 (271)
T 4iin_A          176 QTNYSASKGGMIAMSKSFAYEGALRNIRFNSVTP  209 (271)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEE
T ss_pred             chHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEe
Confidence            779999999999999999988   6899999998

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=99.95  E-value=9.4e-27  Score=193.90  Aligned_cols=166  Identities=12%  Similarity=0.077  Sum_probs=126.8

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~  144 (248)
                      +|+++||||+||||++++++|+++|++|+++++.  +.+...+....+...+.++.++.+|++|.+++++++++     +
T Consensus        25 ~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  102 (269)
T 3gk3_A           25 KRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSE--RNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADFG  102 (269)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECS--CHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCC--chHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            3899999999999999999999999999998852  22223333333333456799999999999999988875     6


Q ss_pred             CCCEEEEcccccccCCCCCCchh----hHhhhHHHHH----HHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCC
Q 025786          145 AFDAVMHFAAVAYVGESTLDPLK----YYHNITSNTL----VVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (248)
Q Consensus       145 ~iD~li~~Ag~~~~~~~~~~~~~----~~~~~~~~~~----~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~  216 (248)
                      ++|+||||||+.......+.+.+    .++.|+.++.    .+++.|++.+.++||++||...+.           +.++
T Consensus       103 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~  171 (269)
T 3gk3_A          103 KVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSR-----------GAFG  171 (269)
T ss_dssp             CCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH-----------CCTT
T ss_pred             CCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhhcc-----------CCCC
Confidence            89999999998755443333333    3445555543    456667777778999999987762           3345


Q ss_pred             CChHHHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          217 INPYGKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                      ...|+.||++.+.+++.++.+   .|+++++++|-
T Consensus       172 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG  206 (269)
T 3gk3_A          172 QANYASAKAGIHGFTKTLALETAKRGITVNTVSPG  206 (269)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred             cchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecC
Confidence            679999999999999999988   48999999983

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.95  E-value=1e-26  Score=194.38  Aligned_cols=166  Identities=12%  Similarity=0.115  Sum_probs=119.0

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      |+++||||+||||++++++|+++|++|++++|+..+.++..+.+......+.++.++.+|++|.+++++++++     ++
T Consensus         7 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   86 (278)
T 1spx_A            7 KVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKFGK   86 (278)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHHHcCC
Confidence            8999999999999999999999999999999754322222222211122234788999999999999988875     58


Q ss_pred             CCEEEEcccccccCCCCCC----c----hhhHhhhHHHHHH----HHHHHHHcCCCEEEEecccee-cCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYVGESTLD----P----LKYYHNITSNTLV----VLESMARHGVDTLIYSSTCAT-YGEPEKMPITEET  212 (248)
Q Consensus       146 iD~li~~Ag~~~~~~~~~~----~----~~~~~~~~~~~~~----ll~~~~~~~~~~iV~~SS~~~-~g~~~~~~~~e~~  212 (248)
                      +|+||||||........+.    +    +..++.|+.++..    +++.|++++ ++||++||..+ +.           
T Consensus        87 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~-----------  154 (278)
T 1spx_A           87 LDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASGLH-----------  154 (278)
T ss_dssp             CCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSSSS-----------
T ss_pred             CCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEeccccccc-----------
Confidence            9999999997644332222    2    2334555555444    556665556 89999999776 52           


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          213 PQAPINPYGKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       213 ~~~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                      +.++...|+.||++.+.+++.++.+   +|+++++|+|.
T Consensus       155 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg  193 (278)
T 1spx_A          155 ATPDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPG  193 (278)
T ss_dssp             CCTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEEC
T ss_pred             CCCCccHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecC
Confidence            3344678999999999999999977   68999999993

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=99.95  E-value=7.1e-27  Score=196.77  Aligned_cols=172  Identities=15%  Similarity=0.153  Sum_probs=135.6

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-CCCCE
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-NAFDA  148 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-~~iD~  148 (248)
                      +|+++||||+||||++++++|+++|++|++++|+..   ...+..+++   +.++.++.+|++|.+++++++++ +++|+
T Consensus        16 gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~---~~~~~~~~~---~~~~~~~~~Dl~d~~~v~~~~~~~~~iD~   89 (291)
T 3rd5_A           16 QRTVVITGANSGLGAVTARELARRGATVIMAVRDTR---KGEAAARTM---AGQVEVRELDLQDLSSVRRFADGVSGADV   89 (291)
T ss_dssp             TCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHH---HHHHHHTTS---SSEEEEEECCTTCHHHHHHHHHTCCCEEE
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHH---HHHHHHHHh---cCCeeEEEcCCCCHHHHHHHHHhcCCCCE
Confidence            499999999999999999999999999999997533   222322322   45789999999999999999987 58999


Q ss_pred             EEEcccccccC--CCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCC-CCCCC-CCCCCCCCCChHHHHH
Q 025786          149 VMHFAAVAYVG--ESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEP-EKMPI-TEETPQAPINPYGKAK  224 (248)
Q Consensus       149 li~~Ag~~~~~--~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~-~~~~~-~e~~~~~~~~~Y~~sK  224 (248)
                      ||||||+....  ...+..+..++.|+.++..+++.+.....++||++||.+++... ..... .+..+.++...|+.||
T Consensus        90 lv~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~riv~isS~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK  169 (291)
T 3rd5_A           90 LINNAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPRLTDRVVTVSSMAHWPGRINLEDLNWRSRRYSPWLAYSQSK  169 (291)
T ss_dssp             EEECCCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEEEEEEECCGGGTTCCCCSSCTTCSSSCCCHHHHHHHHH
T ss_pred             EEECCcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeEeechhhccCCCCcccccccccCCCCcchHHHHH
Confidence            99999986432  23445667788999999999988877666699999998877432 22222 2234556677899999


Q ss_pred             HHHHHHHHHHhhcC---C--CcEEEEec
Q 025786          225 KMAEDIILDFSKNS---D--MAVLQCHR  247 (248)
Q Consensus       225 ~a~e~l~~~~~~~~---g--i~~~~v~P  247 (248)
                      ++.+.+++.++.++   |  +++++++|
T Consensus       170 ~a~~~~~~~la~e~~~~g~~i~v~~v~P  197 (291)
T 3rd5_A          170 LANLLFTSELQRRLTAAGSPLRALAAHP  197 (291)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCEEEEECC
T ss_pred             HHHHHHHHHHHHHHhhCCCCEEEEEeeC
Confidence            99999999999884   5  99999998

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=99.95  E-value=1.3e-26  Score=198.92  Aligned_cols=167  Identities=24%  Similarity=0.376  Sum_probs=139.2

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCC-------CEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhh
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDS-------YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFS  142 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~  142 (248)
                      +|+||||||+||||++++++|+++|       ++|++++|.......         ....++.++.+|++|.+++.++++
T Consensus        14 ~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~---------~~~~~~~~~~~Dl~d~~~~~~~~~   84 (342)
T 2hrz_A           14 GMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA---------GFSGAVDARAADLSAPGEAEKLVE   84 (342)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT---------TCCSEEEEEECCTTSTTHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc---------ccCCceeEEEcCCCCHHHHHHHHh
Confidence            3899999999999999999999999       899999975432211         113468889999999999998885


Q ss_pred             cCCCCEEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcC-----CCEEEEeccceecCCCCCCCCCCCCCCCCC
Q 025786          143 ENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHG-----VDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (248)
Q Consensus       143 ~~~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~-----~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (248)
                       .++|+||||||.... ...+++...++.|+.++.++++++.+.+     .++||++||.++|+.....+++|+.+..|.
T Consensus        85 -~~~d~vih~A~~~~~-~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~~~~~~~  162 (342)
T 2hrz_A           85 -ARPDVIFHLAAIVSG-EAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAPLPYPIPDEFHTTPL  162 (342)
T ss_dssp             -TCCSEEEECCCCCHH-HHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSSCCSSBCTTCCCCCS
T ss_pred             -cCCCEEEECCccCcc-cccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCCCCCCcCCCCCCCCc
Confidence             379999999997532 1123456678889999999999998765     689999999999987655678999999899


Q ss_pred             ChHHHHHHHHHHHHHHHhhcCCCcEEEEec
Q 025786          218 NPYGKAKKMAEDIILDFSKNSDMAVLQCHR  247 (248)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~~~~~gi~~~~v~P  247 (248)
                      ++|+.||.++|.+++.++.+++++.+++||
T Consensus       163 ~~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~  192 (342)
T 2hrz_A          163 TSYGTQKAICELLLSDYSRRGFFDGIGIRL  192 (342)
T ss_dssp             SHHHHHHHHHHHHHHHHHHTTSCEEEEEEE
T ss_pred             chHHHHHHHHHHHHHHHHHhcCCCceeEEe
Confidence            999999999999999999988888888886

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=99.95  E-value=7.1e-27  Score=194.55  Aligned_cols=165  Identities=22%  Similarity=0.186  Sum_probs=124.9

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~  144 (248)
                      +|++|||||+||||++++++|+++|++|+++++..  .+...+..+++...+.++.++++|++|.+++++++++     +
T Consensus        27 ~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  104 (267)
T 3u5t_A           27 NKVAIVTGASRGIGAAIAARLASDGFTVVINYAGK--AAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAFG  104 (267)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSC--SHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCC--HHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            38999999999999999999999999999986422  2222222233322356789999999999999988875     6


Q ss_pred             CCCEEEEcccccccCCCCCCchhhH----hhhHHHHHHHHHHHHHc--CCCEEEEeccceecCCCCCCCCCCCCCCCCCC
Q 025786          145 AFDAVMHFAAVAYVGESTLDPLKYY----HNITSNTLVVLESMARH--GVDTLIYSSTCATYGEPEKMPITEETPQAPIN  218 (248)
Q Consensus       145 ~iD~li~~Ag~~~~~~~~~~~~~~~----~~~~~~~~~ll~~~~~~--~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~  218 (248)
                      ++|+||||||+.......+.+.+.|    +.|+.++..++..+...  ..++||++||...+.           +.++..
T Consensus       105 ~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~~~  173 (267)
T 3u5t_A          105 GVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTSQVGL-----------LHPSYG  173 (267)
T ss_dssp             CEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCTHHHH-----------CCTTCH
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeChhhcc-----------CCCCch
Confidence            8999999999875544444444434    46666666666555432  236999999977652           334467


Q ss_pred             hHHHHHHHHHHHHHHHhhcC---CCcEEEEec
Q 025786          219 PYGKAKKMAEDIILDFSKNS---DMAVLQCHR  247 (248)
Q Consensus       219 ~Y~~sK~a~e~l~~~~~~~~---gi~~~~v~P  247 (248)
                      .|+.||++.+.+++.++.++   |+++++|+|
T Consensus       174 ~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~P  205 (267)
T 3u5t_A          174 IYAAAKAGVEAMTHVLSKELRGRDITVNAVAP  205 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEE
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhhCCEEEEEEE
Confidence            89999999999999999984   799999998

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=99.95  E-value=2.8e-27  Score=200.35  Aligned_cols=166  Identities=17%  Similarity=0.188  Sum_probs=139.9

Q ss_pred             eEEEEecCCchhHHHHHHHHHHC--CCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKD--SYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~  148 (248)
                      |+||||||+||||++++++|+++  |++|++++|+.... .   . .      .++.++.+|++|.+++.+++++.++|+
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~-~---~-~------~~~~~~~~D~~d~~~~~~~~~~~~~d~   71 (312)
T 2yy7_A            3 PKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNT-D---V-V------NSGPFEVVNALDFNQIEHLVEVHKITD   71 (312)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSC-H---H-H------HSSCEEECCTTCHHHHHHHHHHTTCCE
T ss_pred             ceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCccc-c---c-c------CCCceEEecCCCHHHHHHHHhhcCCCE
Confidence            78999999999999999999999  89999999754331 1   1 1      145688999999999999998667999


Q ss_pred             EEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCC-CCCCCCCCCCCCCChHHHHHHHH
Q 025786          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPE-KMPITEETPQAPINPYGKAKKMA  227 (248)
Q Consensus       149 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~-~~~~~e~~~~~~~~~Y~~sK~a~  227 (248)
                      |||+||..... ...++...++.|+.++.++++++.+.+.++||++||.++|+... ..+.+|+.+..|.++|+.||.++
T Consensus        72 vih~a~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~Y~~sK~~~  150 (312)
T 2yy7_A           72 IYLMAALLSAT-AEKNPAFAWDLNMNSLFHVLNLAKAKKIKKIFWPSSIAVFGPTTPKENTPQYTIMEPSTVYGISKQAG  150 (312)
T ss_dssp             EEECCCCCHHH-HHHCHHHHHHHHHHHHHHHHHHHHTTSCSEEECCEEGGGCCTTSCSSSBCSSCBCCCCSHHHHHHHHH
T ss_pred             EEECCccCCCc-hhhChHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHHhCCCCCCCCccccCcCCCCchhHHHHHHH
Confidence            99999965321 12456677889999999999999988888999999999998643 35677888888899999999999


Q ss_pred             HHHHHHHhhcCCCcEEEEecC
Q 025786          228 EDIILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       228 e~l~~~~~~~~gi~~~~v~Pf  248 (248)
                      |++++.++.++|++++++||+
T Consensus       151 e~~~~~~~~~~~~~~~~lrp~  171 (312)
T 2yy7_A          151 ERWCEYYHNIYGVDVRSIRYP  171 (312)
T ss_dssp             HHHHHHHHHHHCCEEECEEEC
T ss_pred             HHHHHHHHHhcCCcEEEEeCC
Confidence            999999998889999999984

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.95  E-value=3.7e-26  Score=191.33  Aligned_cols=165  Identities=15%  Similarity=0.134  Sum_probs=123.1

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCC---ceEEEEccCCCHHHHHHHhhc---
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPG---RLQFIYADLGDAKAVNKFFSE---  143 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~---~~~~~~~Dl~~~~~~~~~~~~---  143 (248)
                      +|+++||||+||||++++++|+++|++|++++|+..+   +.+..+++...+.   ++.++.+|++|.+++++++++   
T Consensus         6 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~---~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   82 (280)
T 1xkq_A            6 NKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSER---LEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLK   82 (280)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHH---HHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHH---HHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHH
Confidence            3899999999999999999999999999999975432   2222233322223   688999999999999888875   


Q ss_pred             --CCCCEEEEcccccccCC----CCCCch----hhHhhhHHHHHH----HHHHHHHcCCCEEEEeccceecCCCCCCCCC
Q 025786          144 --NAFDAVMHFAAVAYVGE----STLDPL----KYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPIT  209 (248)
Q Consensus       144 --~~iD~li~~Ag~~~~~~----~~~~~~----~~~~~~~~~~~~----ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~  209 (248)
                        +++|+||||||+.....    ..+.+.    ..++.|+.++..    +++.|.+++ ++||++||..++...      
T Consensus        83 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~------  155 (280)
T 1xkq_A           83 QFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-GEIVNVSSIVAGPQA------  155 (280)
T ss_dssp             HHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGSSSC------
T ss_pred             hcCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCC-CcEEEecCccccCCC------
Confidence              68999999999764433    222222    334455555444    556666566 899999998776311      


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          210 EETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       210 e~~~~~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                          .++...|+.||++.+.+++.++.+   +|+++++|+|.
T Consensus       156 ----~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG  193 (280)
T 1xkq_A          156 ----QPDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPG  193 (280)
T ss_dssp             ----CCSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEEC
T ss_pred             ----CCcccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeC
Confidence                144678999999999999999976   68999999994

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=99.95  E-value=1.3e-26  Score=192.16  Aligned_cols=166  Identities=13%  Similarity=0.178  Sum_probs=125.0

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc----CCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----NAF  146 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~----~~i  146 (248)
                      |+++||||+||||++++++|+++|++|++++|+....++..+.+.... .+.++.++.+|++|++++++++++    .++
T Consensus         8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~v~~~~~~~~~~~gi   86 (260)
T 2z1n_A            8 KLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLV-SGAQVDIVAGDIREPGDIDRLFEKARDLGGA   86 (260)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHS-TTCCEEEEECCTTCHHHHHHHHHHHHHTTCC
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CCCeEEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence            899999999999999999999999999999975432222222222110 122688999999999999888874    239


Q ss_pred             CEEEEcccccccCCCCCCch----hhHhhhHHHH----HHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCCC
Q 025786          147 DAVMHFAAVAYVGESTLDPL----KYYHNITSNT----LVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPIN  218 (248)
Q Consensus       147 D~li~~Ag~~~~~~~~~~~~----~~~~~~~~~~----~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~  218 (248)
                      |+||||||+....+..+.+.    ..++.|+.++    +.+++.|++++.++||++||..++.           +.++..
T Consensus        87 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~~~  155 (260)
T 2z1n_A           87 DILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLR-----------PWQDLA  155 (260)
T ss_dssp             SEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS-----------CCTTBH
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcC-----------CCCCCc
Confidence            99999999764433222222    3445555554    5577788777778999999988763           334567


Q ss_pred             hHHHHHHHHHHHHHHHhhcC---CCcEEEEecC
Q 025786          219 PYGKAKKMAEDIILDFSKNS---DMAVLQCHRF  248 (248)
Q Consensus       219 ~Y~~sK~a~e~l~~~~~~~~---gi~~~~v~Pf  248 (248)
                      .|+.||++.+.+++.++.++   |+++++|+|.
T Consensus       156 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg  188 (260)
T 2z1n_A          156 LSNIMRLPVIGVVRTLALELAPHGVTVNAVLPS  188 (260)
T ss_dssp             HHHHHTHHHHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhhCeEEEEEEEC
Confidence            89999999999999999884   8999999994

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.95  E-value=1.9e-26  Score=194.88  Aligned_cols=165  Identities=15%  Similarity=0.154  Sum_probs=123.4

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCC---ceEEEEccCCCHHHHHHHhhc---
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPG---RLQFIYADLGDAKAVNKFFSE---  143 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~---~~~~~~~Dl~~~~~~~~~~~~---  143 (248)
                      +|++|||||+||||++++++|+++|++|++++|+..+.++..+.+.+   .+.   ++.++.+|++|.+++++++++   
T Consensus        26 ~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~---~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  102 (297)
T 1xhl_A           26 GKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILK---AGVPAEKINAVVADVTEASGQDDIINTTLA  102 (297)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH---TTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh---cCCCCceEEEEecCCCCHHHHHHHHHHHHH
Confidence            38999999999999999999999999999999754332222222222   123   688999999999999888875   


Q ss_pred             --CCCCEEEEcccccccCC--CCCCch----hhHhhhHHHHH----HHHHHHHHcCCCEEEEeccceecCCCCCCCCCCC
Q 025786          144 --NAFDAVMHFAAVAYVGE--STLDPL----KYYHNITSNTL----VVLESMARHGVDTLIYSSTCATYGEPEKMPITEE  211 (248)
Q Consensus       144 --~~iD~li~~Ag~~~~~~--~~~~~~----~~~~~~~~~~~----~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~  211 (248)
                        +++|+||||||+.....  ..+.+.    ..++.|+.++.    .+++.|++++ ++||++||.+++...        
T Consensus       103 ~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-g~IV~isS~~~~~~~--------  173 (297)
T 1xhl_A          103 KFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-GEIVNVSSIVAGPQA--------  173 (297)
T ss_dssp             HHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGSSSC--------
T ss_pred             hcCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CEEEEEcCchhccCC--------
Confidence              68999999999764433  222223    34455555544    4566666666 899999998776311        


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          212 TPQAPINPYGKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       212 ~~~~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                        .++...|+.||++.+.+++.++.+   +|+++++|+|.
T Consensus       174 --~~~~~~Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG  211 (297)
T 1xhl_A          174 --HSGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPG  211 (297)
T ss_dssp             --CTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEEC
T ss_pred             --CCCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeC
Confidence              144678999999999999999976   68999999994

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=99.95  E-value=8.8e-27  Score=199.79  Aligned_cols=167  Identities=22%  Similarity=0.346  Sum_probs=134.7

Q ss_pred             eEEEEecCCchhHHHHHHHHHHC-CCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCC-HHHHHHHhhcCCCCE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKD-SYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD-AKAVNKFFSENAFDA  148 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~iD~  148 (248)
                      |+||||||+|+||++++++|+++ |++|++++|+..+.+.       +. ...++.++.+|++| .+.+.++++  ++|+
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~-------~~-~~~~~~~~~~D~~~~~~~~~~~~~--~~d~   70 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISR-------FL-NHPHFHFVEGDISIHSEWIEYHVK--KCDV   70 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGG-------GT-TCTTEEEEECCTTTCSHHHHHHHH--HCSE
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHH-------hh-cCCCeEEEeccccCcHHHHHhhcc--CCCE
Confidence            57999999999999999999998 8999999975432211       11 12468899999998 456777876  6899


Q ss_pred             EEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCC-------CCCChHH
Q 025786          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQ-------APINPYG  221 (248)
Q Consensus       149 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~-------~~~~~Y~  221 (248)
                      ||||||.........++.+.++.|+.++.++++++.+.+ ++||++||.++||.....+++|+.+.       .|.+.|+
T Consensus        71 vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~v~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~~Y~  149 (345)
T 2bll_A           71 VLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR-KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYS  149 (345)
T ss_dssp             EEECBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CEEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGHHH
T ss_pred             EEEcccccCccchhcCHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEecHHHcCCCCCCCcCCcccccccCcccCcccccH
Confidence            999999754322223556678888999999999999887 89999999999987766667777643       3445899


Q ss_pred             HHHHHHHHHHHHHhhcCCCcEEEEecC
Q 025786          222 KAKKMAEDIILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       222 ~sK~a~e~l~~~~~~~~gi~~~~v~Pf  248 (248)
                      .||.++|++++.++.++|++++++||+
T Consensus       150 ~sK~~~e~~~~~~~~~~~~~~~ilrp~  176 (345)
T 2bll_A          150 VSKQLLDRVIWAYGEKEGLQFTLFRPF  176 (345)
T ss_dssp             HHHHHHHHHHHHHHHHHCCCEEEEEEC
T ss_pred             HHHHHHHHHHHHHHHhcCCCEEEEcCC
Confidence            999999999999998889999999995

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=99.94  E-value=3.4e-26  Score=190.12  Aligned_cols=153  Identities=13%  Similarity=0.127  Sum_probs=121.3

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~  144 (248)
                      +|++|||||+||||++++++|+++|++|++++|+...              +.++.++.+|++|.+++++++++     +
T Consensus         8 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~--------------~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   73 (264)
T 2dtx_A            8 DKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG--------------EAKYDHIECDVTNPDQVKASIDHIFKEYG   73 (264)
T ss_dssp             TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC--------------SCSSEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc--------------CCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            3899999999999999999999999999999875322              23578899999999999988875     5


Q ss_pred             CCCEEEEcccccccCCCCCCch----hhHhhhHHHHH----HHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCC
Q 025786          145 AFDAVMHFAAVAYVGESTLDPL----KYYHNITSNTL----VVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (248)
Q Consensus       145 ~iD~li~~Ag~~~~~~~~~~~~----~~~~~~~~~~~----~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~  216 (248)
                      ++|+||||||+.......+.+.    ..++.|+.++.    .+++.|++++.++||++||.+++.           +.++
T Consensus        74 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~  142 (264)
T 2dtx_A           74 SISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASI-----------ITKN  142 (264)
T ss_dssp             CCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGTS-----------CCTT
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhcc-----------CCCC
Confidence            8999999999865444333333    34455655544    456666666678999999987763           3345


Q ss_pred             CChHHHHHHHHHHHHHHHhhcCC--CcEEEEec
Q 025786          217 INPYGKAKKMAEDIILDFSKNSD--MAVLQCHR  247 (248)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~~~~~g--i~~~~v~P  247 (248)
                      ...|+.||++.+.+++.++.+++  +++++|+|
T Consensus       143 ~~~Y~~sK~a~~~~~~~la~e~~~~i~vn~v~P  175 (264)
T 2dtx_A          143 ASAYVTSKHAVIGLTKSIALDYAPLLRCNAVCP  175 (264)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEE
T ss_pred             chhHHHHHHHHHHHHHHHHHHhcCCcEEEEEEe
Confidence            67899999999999999998855  99999998

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=99.94  E-value=2e-26  Score=190.76  Aligned_cols=166  Identities=15%  Similarity=0.098  Sum_probs=123.1

Q ss_pred             CCceEEEEecCCc--hhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc--
Q 025786           68 EGVTHVLVTGGAG--YIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE--  143 (248)
Q Consensus        68 ~~~k~vlITGasg--~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--  143 (248)
                      .+ |+++||||+|  |||+++|+.|+++|++|++++|+.+..++..+.+++..  ..++.++++|++|++++++++++  
T Consensus         5 ~g-K~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~   81 (256)
T 4fs3_A            5 EN-KTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLN--QPEAHLYQIDVQSDEEVINGFEQIG   81 (256)
T ss_dssp             TT-CEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGT--CSSCEEEECCTTCHHHHHHHHHHHH
T ss_pred             CC-CEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC--CCcEEEEEccCCCHHHHHHHHHHHH
Confidence            44 9999999876  99999999999999999999986555555555444432  34788999999999999888875  


Q ss_pred             ---CCCCEEEEcccccccCC----CCCCchhhHhhh----HHHHHHHHHHHHH--cCCCEEEEeccceecCCCCCCCCCC
Q 025786          144 ---NAFDAVMHFAAVAYVGE----STLDPLKYYHNI----TSNTLVVLESMAR--HGVDTLIYSSTCATYGEPEKMPITE  210 (248)
Q Consensus       144 ---~~iD~li~~Ag~~~~~~----~~~~~~~~~~~~----~~~~~~ll~~~~~--~~~~~iV~~SS~~~~g~~~~~~~~e  210 (248)
                         +++|+||||||+.....    ..+...+.|...    ..+...+...+..  .+.++||++||.+..          
T Consensus        82 ~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~~~----------  151 (256)
T 4fs3_A           82 KDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGE----------  151 (256)
T ss_dssp             HHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECGGGT----------
T ss_pred             HHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEeccccc----------
Confidence               79999999999754322    223333444332    2222223322222  235799999997765          


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          211 ETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       211 ~~~~~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                       .+.+....|++||++.+.|++.++.|   +||+|++|.|
T Consensus       152 -~~~~~~~~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~P  190 (256)
T 4fs3_A          152 -FAVQNYNVMGVAKASLEANVKYLALDLGPDNIRVNAISA  190 (256)
T ss_dssp             -SCCTTTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE
T ss_pred             -cCcccchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEec
Confidence             24455779999999999999999988   6899999998

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=99.94  E-value=3.1e-26  Score=188.32  Aligned_cols=164  Identities=16%  Similarity=0.118  Sum_probs=125.1

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhh-cCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQEL-FPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~  144 (248)
                      |+++||||+||||++++++|+++|++|++++|+..+   ..+..+++ ...+.++.++.+|++|++++++++++     +
T Consensus         3 k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~---~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   79 (250)
T 2cfc_A            3 RVAIVTGASSGNGLAIATRFLARGDRVAALDLSAET---LEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFG   79 (250)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHH---HHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHH---HHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            899999999999999999999999999999975332   22222222 12234788999999999999988875     5


Q ss_pred             CCCEEEEcccccccCC---CCCC----chhhHhhhHHHH----HHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCC
Q 025786          145 AFDAVMHFAAVAYVGE---STLD----PLKYYHNITSNT----LVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETP  213 (248)
Q Consensus       145 ~iD~li~~Ag~~~~~~---~~~~----~~~~~~~~~~~~----~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~  213 (248)
                      ++|+||||||......   ..+.    .+..++.|..++    ..+++.|++.+.++||++||...+.           +
T Consensus        80 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~-----------~  148 (250)
T 2cfc_A           80 AIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLV-----------A  148 (250)
T ss_dssp             CCCEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS-----------C
T ss_pred             CCCEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhcc-----------C
Confidence            8999999999764332   2222    233445555554    4567777777778999999987763           2


Q ss_pred             CCCCChHHHHHHHHHHHHHHHhhcC---CCcEEEEecC
Q 025786          214 QAPINPYGKAKKMAEDIILDFSKNS---DMAVLQCHRF  248 (248)
Q Consensus       214 ~~~~~~Y~~sK~a~e~l~~~~~~~~---gi~~~~v~Pf  248 (248)
                      .++...|+.||++.+.+++.++.++   |+++++++|.
T Consensus       149 ~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg  186 (250)
T 2cfc_A          149 FPGRSAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPG  186 (250)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeC
Confidence            3456789999999999999999875   9999999994

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=99.94  E-value=3.7e-26  Score=189.69  Aligned_cols=164  Identities=11%  Similarity=0.016  Sum_probs=117.0

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc------C
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE------N  144 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~------~  144 (248)
                      |+|+||||+||||++++++|+++|++|++++|+....   .+..+++...+.++.++.+|++|.+++++++++      +
T Consensus        15 k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~---~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   91 (266)
T 1xq1_A           15 KTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYEL---NECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGG   91 (266)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHH---HHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTT
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH---HHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            8999999999999999999999999999998754322   222222222245688999999999999988865      6


Q ss_pred             CCCEEEEcccccccCCCCCCc----hhhHhhhHHHHHHH----HHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCC
Q 025786          145 AFDAVMHFAAVAYVGESTLDP----LKYYHNITSNTLVV----LESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (248)
Q Consensus       145 ~iD~li~~Ag~~~~~~~~~~~----~~~~~~~~~~~~~l----l~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~  216 (248)
                      ++|+||||||........+.+    +..++.|+.++.++    ++.|++.+.++||++||..++.           +.++
T Consensus        92 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~-----------~~~~  160 (266)
T 1xq1_A           92 KLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVV-----------SASV  160 (266)
T ss_dssp             CCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC---------------------
T ss_pred             CCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhcc-----------CCCC
Confidence            899999999976543332222    33455666665555    4555667778999999987763           2344


Q ss_pred             CChHHHHHHHHHHHHHHHhhcC---CCcEEEEecC
Q 025786          217 INPYGKAKKMAEDIILDFSKNS---DMAVLQCHRF  248 (248)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~~~~~---gi~~~~v~Pf  248 (248)
                      ...|+.||++.+.+++.++.++   |+++++++|.
T Consensus       161 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg  195 (266)
T 1xq1_A          161 GSIYSATKGALNQLARNLACEWASDGIRANAVAPA  195 (266)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECC
T ss_pred             CchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEeeC
Confidence            6799999999999999999884   8999999994

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=99.94  E-value=2e-26  Score=196.61  Aligned_cols=166  Identities=13%  Similarity=0.084  Sum_probs=125.7

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~  144 (248)
                      +|+||||||+||||++++++|+++|++|++++|+..+.++..+.+... ....++.++.+|++|.+++.+++++     +
T Consensus         8 ~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   86 (319)
T 3ioy_A            8 GRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAE-GSGPEVMGVQLDVASREGFKMAADEVEARFG   86 (319)
T ss_dssp             TCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH-TCGGGEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-CCCCeEEEEECCCCCHHHHHHHHHHHHHhCC
Confidence            389999999999999999999999999999997654433333333322 1123789999999999999988875     5


Q ss_pred             CCCEEEEcccccccCCCCCCc----hhhHhhhHHHHHH----HHHHHHHc------CCCEEEEeccceecCCCCCCCCCC
Q 025786          145 AFDAVMHFAAVAYVGESTLDP----LKYYHNITSNTLV----VLESMARH------GVDTLIYSSTCATYGEPEKMPITE  210 (248)
Q Consensus       145 ~iD~li~~Ag~~~~~~~~~~~----~~~~~~~~~~~~~----ll~~~~~~------~~~~iV~~SS~~~~g~~~~~~~~e  210 (248)
                      ++|+||||||+....+..+.+    +..++.|+.++.+    +++.|.++      +.++||++||.+++.         
T Consensus        87 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~---------  157 (319)
T 3ioy_A           87 PVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFL---------  157 (319)
T ss_dssp             CEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTC---------
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEeccccccc---------
Confidence            899999999986544433333    3345566666544    55666554      467999999988873         


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          211 ETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       211 ~~~~~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                        +.+....|+.||++++.+++.++.+   .|+++++|+|
T Consensus       158 --~~~~~~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~P  195 (319)
T 3ioy_A          158 --AAGSPGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCP  195 (319)
T ss_dssp             --CCSSSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECC
T ss_pred             --CCCCCHHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEc
Confidence              3344678999999999999998876   4899999998

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=99.94  E-value=2.4e-26  Score=192.27  Aligned_cols=165  Identities=17%  Similarity=0.145  Sum_probs=124.5

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~  144 (248)
                      +|+++||||+||||++++++|+++|++|++++|+....   .+..+++...+.++.++.+|++|.+++++++++     +
T Consensus        22 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~---~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   98 (277)
T 2rhc_B           22 SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGL---RTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYG   98 (277)
T ss_dssp             SCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHH---HHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH---HHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            38999999999999999999999999999999754322   222222222245788999999999999888875     5


Q ss_pred             CCCEEEEcccccccCCCCCCc----hhhHhhhHHHHHHHHHH------HHHcCCCEEEEeccceecCCCCCCCCCCCCCC
Q 025786          145 AFDAVMHFAAVAYVGESTLDP----LKYYHNITSNTLVVLES------MARHGVDTLIYSSTCATYGEPEKMPITEETPQ  214 (248)
Q Consensus       145 ~iD~li~~Ag~~~~~~~~~~~----~~~~~~~~~~~~~ll~~------~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~  214 (248)
                      ++|+||||||+.......+.+    +..++.|+.++.++...      |++++.++||++||...+.           +.
T Consensus        99 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~~-----------~~  167 (277)
T 2rhc_B           99 PVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQ-----------GV  167 (277)
T ss_dssp             SCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGTS-----------CC
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECcccccc-----------CC
Confidence            899999999986543332222    33455666665555444      5555668999999987652           23


Q ss_pred             CCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          215 APINPYGKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       215 ~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                      ++...|+.||++.+.+++.++.+   .|+++++|+|.
T Consensus       168 ~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG  204 (277)
T 2rhc_B          168 VHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPG  204 (277)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEEC
T ss_pred             CCCccHHHHHHHHHHHHHHHHHHHHHhCcEEEEEecC
Confidence            45678999999999999999987   58999999993

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.94  E-value=1.5e-26  Score=190.17  Aligned_cols=159  Identities=16%  Similarity=0.123  Sum_probs=121.4

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-CCCCEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-NAFDAV  149 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-~~iD~l  149 (248)
                      |+++||||+||||++++++|+++|++|++++|+..   .+.+.. ++    .++.++.+|++|.+++++++++ +++|+|
T Consensus         7 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~---~~~~~~-~~----~~~~~~~~D~~~~~~~~~~~~~~~~id~l   78 (246)
T 2ag5_A            7 KVIILTAAAQGIGQAAALAFAREGAKVIATDINES---KLQELE-KY----PGIQTRVLDVTKKKQIDQFANEVERLDVL   78 (246)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHH---HHGGGG-GS----TTEEEEECCTTCHHHHHHHHHHCSCCSEE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHH---HHHHHH-hc----cCceEEEeeCCCHHHHHHHHHHhCCCCEE
Confidence            89999999999999999999999999999987432   222211 21    2688899999999999987765 689999


Q ss_pred             EEcccccccCCCCCCchh----hHhhhHHHHH----HHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCC-CCChH
Q 025786          150 MHFAAVAYVGESTLDPLK----YYHNITSNTL----VVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQA-PINPY  220 (248)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~----~~~~~~~~~~----~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~-~~~~Y  220 (248)
                      |||||........+.+.+    .++.|+.++.    .+++.|++++.++||++||.+.+.           +.+ +...|
T Consensus        79 v~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~~~~~Y  147 (246)
T 2ag5_A           79 FNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSV-----------KGVVNRCVY  147 (246)
T ss_dssp             EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTT-----------BCCTTBHHH
T ss_pred             EECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHhCc-----------CCCCCCccH
Confidence            999998654433333333    3345555543    456667677778999999987652           122 46789


Q ss_pred             HHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          221 GKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       221 ~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                      +.||++.+.+++.++.+   +|+++++++|.
T Consensus       148 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg  178 (246)
T 2ag5_A          148 STTKAAVIGLTKSVAADFIQQGIRCNCVCPG  178 (246)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEES
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCcEEEEEeeC
Confidence            99999999999999987   48999999994

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=99.94  E-value=2.3e-26  Score=191.71  Aligned_cols=167  Identities=20%  Similarity=0.184  Sum_probs=125.5

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~  144 (248)
                      +|++|||||++|||++++++|+++|++|+++++..  .+...+..+++...+.++.++++|++|.+++++++++     +
T Consensus        18 ~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   95 (270)
T 3is3_A           18 GKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANS--TKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHFG   95 (270)
T ss_dssp             TCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSC--HHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCC--HHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            39999999999999999999999999999987532  2222233333323356789999999999999988875     6


Q ss_pred             CCCEEEEcccccccCCCCCCc----hhhHhhhHHHHHHHHHHHHHc--CCCEEEEeccceecCCCCCCCCCCCCCCCCCC
Q 025786          145 AFDAVMHFAAVAYVGESTLDP----LKYYHNITSNTLVVLESMARH--GVDTLIYSSTCATYGEPEKMPITEETPQAPIN  218 (248)
Q Consensus       145 ~iD~li~~Ag~~~~~~~~~~~----~~~~~~~~~~~~~ll~~~~~~--~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~  218 (248)
                      ++|+||||||+.......+.+    +..++.|+.++..+...+...  ..++||++||....          ..+.++..
T Consensus        96 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~----------~~~~~~~~  165 (270)
T 3is3_A           96 HLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNTSK----------DFSVPKHS  165 (270)
T ss_dssp             CCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTTTT----------TCCCTTCH
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCchhc----------cCCCCCCc
Confidence            899999999987554433333    334556666666665555443  24699999996532          12345577


Q ss_pred             hHHHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          219 PYGKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       219 ~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                      .|+.||++.+.+++.++.+   .|+++++|+|.
T Consensus       166 ~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG  198 (270)
T 3is3_A          166 LYSGSKGAVDSFVRIFSKDCGDKKITVNAVAPG  198 (270)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEEC
T ss_pred             hhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeC
Confidence            8999999999999999988   58999999993

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=99.94  E-value=5.3e-26  Score=188.63  Aligned_cols=161  Identities=16%  Similarity=0.108  Sum_probs=122.2

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      |++|||||+||||++++++|+++|++|++++|+..   ...+..+++   ..++.++++|++|.+++++++++     ++
T Consensus        13 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~---~~~~~~~~~---~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~   86 (263)
T 3ak4_A           13 RKAIVTGGSKGIGAAIARALDKAGATVAIADLDVM---AAQAVVAGL---ENGGFAVEVDVTKRASVDAAMQKAIDALGG   86 (263)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHH---HHHHHHHTC---TTCCEEEECCTTCHHHHHHHHHHHHHHHTC
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHH---HHHHHHHHH---hcCCeEEEEeCCCHHHHHHHHHHHHHHcCC
Confidence            89999999999999999999999999999986432   222222222   12578899999999999888875     58


Q ss_pred             CCEEEEcccccccCCCCCCchh----hHhhhHHHHHH----HHHHHHHcC-CCEEEEeccceecCCCCCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYVGESTLDPLK----YYHNITSNTLV----VLESMARHG-VDTLIYSSTCATYGEPEKMPITEETPQAP  216 (248)
Q Consensus       146 iD~li~~Ag~~~~~~~~~~~~~----~~~~~~~~~~~----ll~~~~~~~-~~~iV~~SS~~~~g~~~~~~~~e~~~~~~  216 (248)
                      +|+||||||+....+..+.+.+    .++.|..++..    +++.|.+++ .++||++||..++.           +.++
T Consensus        87 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~  155 (263)
T 3ak4_A           87 FDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKV-----------GAPL  155 (263)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTS-----------CCTT
T ss_pred             CCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccc-----------CCCC
Confidence            9999999998654333333333    34455555443    566666666 68999999987752           2345


Q ss_pred             CChHHHHHHHHHHHHHHHhhcC---CCcEEEEecC
Q 025786          217 INPYGKAKKMAEDIILDFSKNS---DMAVLQCHRF  248 (248)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~~~~~---gi~~~~v~Pf  248 (248)
                      ...|+.||++.+.+++.++.++   |+++++++|.
T Consensus       156 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg  190 (263)
T 3ak4_A          156 LAHYSASKFAVFGWTQALAREMAPKNIRVNCVCPG  190 (263)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEEC
T ss_pred             chhHHHHHHHHHHHHHHHHHHHhHcCeEEEEEecc
Confidence            6789999999999999999874   8999999994

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=99.94  E-value=5.8e-27  Score=200.57  Aligned_cols=172  Identities=22%  Similarity=0.265  Sum_probs=134.3

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEE-EccCCCHHHHHHHhhcCCCCE
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFI-YADLGDAKAVNKFFSENAFDA  148 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~Dl~~~~~~~~~~~~~~iD~  148 (248)
                      +|+||||||+||||++++++|+++|++|++++|+..+.+...+.+....  +.++.++ .+|++|.+++.++++  ++|+
T Consensus        11 ~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~d~~~~~~~~~--~~d~   86 (342)
T 1y1p_A           11 GSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKY--PGRFETAVVEDMLKQGAYDEVIK--GAAG   86 (342)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHS--TTTEEEEECSCTTSTTTTTTTTT--TCSE
T ss_pred             CCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccC--CCceEEEEecCCcChHHHHHHHc--CCCE
Confidence            3899999999999999999999999999999875432222222211111  2468888 899999999988887  7999


Q ss_pred             EEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHH-cCCCEEEEeccceecCCCC----CCCCCCCC-----------
Q 025786          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMAR-HGVDTLIYSSTCATYGEPE----KMPITEET-----------  212 (248)
Q Consensus       149 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~-~~~~~iV~~SS~~~~g~~~----~~~~~e~~-----------  212 (248)
                      ||||||.....   .++.+.++.|+.++.++++++.+ .+.++||++||.++|+...    +.+++|+.           
T Consensus        87 vih~A~~~~~~---~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~  163 (342)
T 1y1p_A           87 VAHIASVVSFS---NKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKT  163 (342)
T ss_dssp             EEECCCCCSCC---SCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHH
T ss_pred             EEEeCCCCCCC---CCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHHHhcCCCCCCCCcccCccccCchhhhhhcc
Confidence            99999975432   35677888999999999999985 5678999999998886432    14566765           


Q ss_pred             -----CCCCCChHHHHHHHHHHHHHHHhhcC--CCcEEEEecC
Q 025786          213 -----PQAPINPYGKAKKMAEDIILDFSKNS--DMAVLQCHRF  248 (248)
Q Consensus       213 -----~~~~~~~Y~~sK~a~e~l~~~~~~~~--gi~~~~v~Pf  248 (248)
                           +..|.+.|+.||.++|++++.++.++  +++++++||+
T Consensus       164 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~rp~  206 (342)
T 1y1p_A          164 LPESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPN  206 (342)
T ss_dssp             SCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEES
T ss_pred             ccccccccchHHHHHHHHHHHHHHHHHHHhcCCCceEEEEcCC
Confidence                 23356789999999999999998875  7899999985

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=99.94  E-value=4.5e-26  Score=190.10  Aligned_cols=167  Identities=21%  Similarity=0.194  Sum_probs=125.5

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~  144 (248)
                      +|++|||||+||||++++++|+++|++|+++++..  .+...+..+++...+.++.++.+|++|.+++++++++     +
T Consensus        31 gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  108 (271)
T 3v2g_A           31 GKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNA--AERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEALG  108 (271)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSC--HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCC--HHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            39999999999999999999999999999987532  2222333333323356789999999999999988875     6


Q ss_pred             CCCEEEEcccccccCCCCCCch----hhHhhhHHHHHHHHHHHHHc--CCCEEEEeccceecCCCCCCCCCCCCCCCCCC
Q 025786          145 AFDAVMHFAAVAYVGESTLDPL----KYYHNITSNTLVVLESMARH--GVDTLIYSSTCATYGEPEKMPITEETPQAPIN  218 (248)
Q Consensus       145 ~iD~li~~Ag~~~~~~~~~~~~----~~~~~~~~~~~~ll~~~~~~--~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~  218 (248)
                      ++|+||||||+....+..+.+.    ..++.|+.++..++..+.+.  +.++||++||.....          .+.++..
T Consensus       109 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~~~~~----------~~~~~~~  178 (271)
T 3v2g_A          109 GLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSNLAEL----------VPWPGIS  178 (271)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCGGGTC----------CCSTTCH
T ss_pred             CCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeChhhcc----------CCCCCch
Confidence            8999999999865544333333    34456666666666665543  357999999865431          1244577


Q ss_pred             hHHHHHHHHHHHHHHHhhcC---CCcEEEEecC
Q 025786          219 PYGKAKKMAEDIILDFSKNS---DMAVLQCHRF  248 (248)
Q Consensus       219 ~Y~~sK~a~e~l~~~~~~~~---gi~~~~v~Pf  248 (248)
                      .|+.||++.+.+++.++.++   |+++++|+|.
T Consensus       179 ~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG  211 (271)
T 3v2g_A          179 LYSASKAALAGLTKGLARDLGPRGITVNIVHPG  211 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEEC
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecC
Confidence            99999999999999999884   8999999983

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=99.94  E-value=8.3e-26  Score=186.21  Aligned_cols=154  Identities=18%  Similarity=0.212  Sum_probs=121.3

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      |+++||||+||||++++++|+++|++|++++|+...        +   . . .+.++.+|++|.+++++++++     ++
T Consensus         8 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~--------~---~-~-~~~~~~~D~~d~~~~~~~~~~~~~~~g~   74 (250)
T 2fwm_X            8 KNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ--------E---Q-Y-PFATEVMDVADAAQVAQVCQRLLAETER   74 (250)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS--------S---C-C-SSEEEECCTTCHHHHHHHHHHHHHHCSC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh--------h---c-C-CceEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            899999999999999999999999999999875321        0   1 1 277889999999999988875     58


Q ss_pred             CCEEEEcccccccCCCCCCchh----hHhhhHHHHHH----HHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYVGESTLDPLK----YYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (248)
Q Consensus       146 iD~li~~Ag~~~~~~~~~~~~~----~~~~~~~~~~~----ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (248)
                      +|+||||||........+.+.+    .++.|+.++..    +++.|++++.++||++||..++.           +.++.
T Consensus        75 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~-----------~~~~~  143 (250)
T 2fwm_X           75 LDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHT-----------PRIGM  143 (250)
T ss_dssp             CCEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTS-----------CCTTC
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCCEEEEECchhhCC-----------CCCCC
Confidence            9999999998654433333333    34455555444    56666777778999999987762           34457


Q ss_pred             ChHHHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          218 NPYGKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                      ..|+.||++.+.+++.++.+   .|+++++++|.
T Consensus       144 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg  177 (250)
T 2fwm_X          144 SAYGASKAALKSLALSVGLELAGSGVRCNVVSPG  177 (250)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEEC
T ss_pred             chHHHHHHHHHHHHHHHHHHhCccCCEEEEEECC
Confidence            79999999999999999987   48999999993

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=99.94  E-value=1.4e-26  Score=193.14  Aligned_cols=165  Identities=13%  Similarity=0.087  Sum_probs=124.9

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~  144 (248)
                      +|+++||||+||||++++++|+++|++|++++|+....++..+.+++   .+.++.++.+|++|.+++++++++     +
T Consensus        31 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~---~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  107 (272)
T 1yb1_A           31 GEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKG---LGAKVHTFVVDCSNREDIYSSAKKVKAEIG  107 (272)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH---TTCCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHh---cCCeEEEEEeeCCCHHHHHHHHHHHHHHCC
Confidence            38999999999999999999999999999999754322222222222   245789999999999999888865     5


Q ss_pred             CCCEEEEcccccccCCCCCCc----hhhHhhhHHH----HHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCC
Q 025786          145 AFDAVMHFAAVAYVGESTLDP----LKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (248)
Q Consensus       145 ~iD~li~~Ag~~~~~~~~~~~----~~~~~~~~~~----~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~  216 (248)
                      ++|+||||||+.......+.+    +..++.|+.+    +..+++.|.+.+.++||++||..++.           +.++
T Consensus       108 ~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~-----------~~~~  176 (272)
T 1yb1_A          108 DVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHV-----------SVPF  176 (272)
T ss_dssp             CCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CC-----------CHHH
T ss_pred             CCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEechhhcC-----------CCCC
Confidence            899999999986544333222    2345556666    44466777777778999999987763           2234


Q ss_pred             CChHHHHHHHHHHHHHHHhhcC------CCcEEEEecC
Q 025786          217 INPYGKAKKMAEDIILDFSKNS------DMAVLQCHRF  248 (248)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~~~~~------gi~~~~v~Pf  248 (248)
                      ...|+.||++.+.+++.++.++      |+++++++|.
T Consensus       177 ~~~Y~~sK~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg  214 (272)
T 1yb1_A          177 LLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPN  214 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEET
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCC
Confidence            5689999999999999999874      8999999984

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=99.94  E-value=6e-26  Score=187.64  Aligned_cols=167  Identities=16%  Similarity=0.100  Sum_probs=124.7

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~  144 (248)
                      +|+|+||||+||||++++++|+++|++|++++|+....+...   +++...+.++.++.+|++|.+++++++++     +
T Consensus        13 ~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~---~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (260)
T 3awd_A           13 NRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAV---EDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQEG   89 (260)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH---HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---HHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            389999999999999999999999999999997543222222   22222245789999999999999988875     5


Q ss_pred             CCCEEEEcccccc-cCCCCCCc----hhhHhhhHHHHHHH----HHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCC
Q 025786          145 AFDAVMHFAAVAY-VGESTLDP----LKYYHNITSNTLVV----LESMARHGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (248)
Q Consensus       145 ~iD~li~~Ag~~~-~~~~~~~~----~~~~~~~~~~~~~l----l~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~  215 (248)
                      ++|+||||||... .....+.+    +..++.|+.++.++    ++.|.+.+.++||++||..++...         +..
T Consensus        90 ~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~---------~~~  160 (260)
T 3awd_A           90 RVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVN---------RPQ  160 (260)
T ss_dssp             CCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC---------SSS
T ss_pred             CCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchhcccC---------CCC
Confidence            8999999999764 32322222    33455666665554    445555667899999998765321         222


Q ss_pred             CCChHHHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          216 PINPYGKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                      +...|+.||++.+.+++.++.+   +|+++++++|.
T Consensus       161 ~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg  196 (260)
T 3awd_A          161 QQAAYNASKAGVHQYIRSLAAEWAPHGIRANAVAPT  196 (260)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred             CccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEEee
Confidence            3478999999999999999988   79999999994

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=99.94  E-value=3.5e-26  Score=191.81  Aligned_cols=167  Identities=17%  Similarity=0.154  Sum_probs=125.5

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~  144 (248)
                      +|++|||||+||||++++++|+++|++|++++|+...  ...+..+++...+.++.++.+|++|.+++.+++++     +
T Consensus        29 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  106 (283)
T 1g0o_A           29 GKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTE--SAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFG  106 (283)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHH--HHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchH--HHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            3899999999999999999999999999999875321  11122222222245788999999999999888765     6


Q ss_pred             CCCEEEEcccccccCCCCC----CchhhHhhhHHHHHHHHHHHHHc--CCCEEEEeccceecCCCCCCCCCCCCCCCCCC
Q 025786          145 AFDAVMHFAAVAYVGESTL----DPLKYYHNITSNTLVVLESMARH--GVDTLIYSSTCATYGEPEKMPITEETPQAPIN  218 (248)
Q Consensus       145 ~iD~li~~Ag~~~~~~~~~----~~~~~~~~~~~~~~~ll~~~~~~--~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~  218 (248)
                      ++|+||||||+.......+    ..+..++.|+.++.++++.+.+.  +.++||++||...+..          ...+..
T Consensus       107 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~----------~~~~~~  176 (283)
T 1g0o_A          107 KLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAK----------AVPKHA  176 (283)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCS----------SCSSCH
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEechhhccC----------CCCCCc
Confidence            8999999999865433222    23344567777777777766654  5689999999776521          112367


Q ss_pred             hHHHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          219 PYGKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       219 ~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                      .|+.||++.+.+++.++.+   +|+++++|+|.
T Consensus       177 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG  209 (283)
T 1g0o_A          177 VYSGSKGAIETFARCMAIDMADKKITVNVVAPG  209 (283)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEEC
T ss_pred             chHHHHHHHHHHHHHHHHHhcccCeEEEEEecC
Confidence            8999999999999999977   58999999994

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=99.94  E-value=2.9e-26  Score=188.14  Aligned_cols=163  Identities=13%  Similarity=0.078  Sum_probs=114.6

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEe-cCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVD-NLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~  144 (248)
                      |+++||||+||||++++++|+++|++|++++ |+..   ...+..+++...+.++.++.+|++|.+++++++++     +
T Consensus         6 ~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   82 (247)
T 2hq1_A            6 KTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPAST---SLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAFG   82 (247)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCS---HHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHHS
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHH---HHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            8999999999999999999999999999984 3322   22222222222245788999999999999988875     5


Q ss_pred             CCCEEEEcccccccCC----CCCCchhhHhhhHHHHHH----HHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCC
Q 025786          145 AFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (248)
Q Consensus       145 ~iD~li~~Ag~~~~~~----~~~~~~~~~~~~~~~~~~----ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~  216 (248)
                      ++|+||||||......    ..+..+..++.|+.++.+    +++.|++.+.++||++||...+.           +.++
T Consensus        83 ~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~-----------~~~~  151 (247)
T 2hq1_A           83 RIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGII-----------GNAG  151 (247)
T ss_dssp             CCCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC--------------------
T ss_pred             CCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcc-----------CCCC
Confidence            8999999999764322    223445566777777444    55666666778999999975431           2234


Q ss_pred             CChHHHHHHHHHHHHHHHhhcC---CCcEEEEec
Q 025786          217 INPYGKAKKMAEDIILDFSKNS---DMAVLQCHR  247 (248)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~~~~~---gi~~~~v~P  247 (248)
                      ..+|+.||++.+.+++.++.++   |+++++++|
T Consensus       152 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~P  185 (247)
T 2hq1_A          152 QANYAASKAGLIGFTKSIAKEFAAKGIYCNAVAP  185 (247)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE
T ss_pred             CcHhHHHHHHHHHHHHHHHHHHHHcCcEEEEEEE
Confidence            6789999999999999998874   899999998

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=99.94  E-value=8.5e-27  Score=199.08  Aligned_cols=168  Identities=17%  Similarity=0.104  Sum_probs=125.5

Q ss_pred             CceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCC-------CCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHh
Q 025786           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS-------RGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFF  141 (248)
Q Consensus        69 ~~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~-------~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~  141 (248)
                      .+|++|||||+||||++++++|+++|++|++++|+.       +..+...+..+++...+.++.++.+|++|.+++++++
T Consensus        26 ~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~  105 (322)
T 3qlj_A           26 DGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAGLI  105 (322)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHH
Confidence            349999999999999999999999999999998751       1122333333344333567889999999999999888


Q ss_pred             hc-----CCCCEEEEcccccccCCCCCCch----hhHhhhHHHHHH----HHHHHHHcC------CCEEEEeccceecCC
Q 025786          142 SE-----NAFDAVMHFAAVAYVGESTLDPL----KYYHNITSNTLV----VLESMARHG------VDTLIYSSTCATYGE  202 (248)
Q Consensus       142 ~~-----~~iD~li~~Ag~~~~~~~~~~~~----~~~~~~~~~~~~----ll~~~~~~~------~~~iV~~SS~~~~g~  202 (248)
                      ++     +++|+||||||+.......+.+.    ..++.|+.++..    +++.|.+.+      .++||++||..++. 
T Consensus       106 ~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~-  184 (322)
T 3qlj_A          106 QTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQ-  184 (322)
T ss_dssp             HHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECCHHHHH-
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcCHHHcc-
Confidence            75     68999999999875544333333    344556665444    444444322      26999999987762 


Q ss_pred             CCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          203 PEKMPITEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       203 ~~~~~~~e~~~~~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                                +.++...|+.||++++.+++.++.+   +||++++|+|
T Consensus       185 ----------~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~P  222 (322)
T 3qlj_A          185 ----------GSVGQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAP  222 (322)
T ss_dssp             ----------CBTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE
T ss_pred             ----------CCCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEecC
Confidence                      3344678999999999999999988   6899999998

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=99.94  E-value=1.3e-26  Score=196.72  Aligned_cols=162  Identities=23%  Similarity=0.343  Sum_probs=136.7

Q ss_pred             EEEEecCCchhHHHHHHHHHHC--CCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 025786           72 HVLVTGGAGYIGSHAALRLLKD--SYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (248)
Q Consensus        72 ~vlITGasg~IG~~la~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~l  149 (248)
                      +||||||+||||++++++|+++  |++|++++|.....              .++.++.+|++|.+++.+++++.++|+|
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~--------------~~~~~~~~D~~d~~~~~~~~~~~~~d~v   66 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDT--------------GGIKFITLDVSNRDEIDRAVEKYSIDAI   66 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCC--------------TTCCEEECCTTCHHHHHHHHHHTTCCEE
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCccc--------------cCceEEEecCCCHHHHHHHHhhcCCcEE
Confidence            4899999999999999999999  89999998753221              0356789999999999999986679999


Q ss_pred             EEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCC-CCCCCCCCCCCCCCChHHHHHHHHH
Q 025786          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEP-EKMPITEETPQAPINPYGKAKKMAE  228 (248)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~-~~~~~~e~~~~~~~~~Y~~sK~a~e  228 (248)
                      ||+||.... ....+++..++.|+.++.++++++.+.+.++||++||.++|+.. ...+.+|+.+..|.+.|+.||.++|
T Consensus        67 ih~a~~~~~-~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~e  145 (317)
T 3ajr_A           67 FHLAGILSA-KGEKDPALAYKVNMNGTYNILEAAKQHRVEKVVIPSTIGVFGPETPKNKVPSITITRPRTMFGVTKIAAE  145 (317)
T ss_dssp             EECCCCCHH-HHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCTTSCSSSBCSSSCCCCCSHHHHHHHHHH
T ss_pred             EECCcccCC-ccccChHHHhhhhhHHHHHHHHHHHHcCCCEEEEecCHHHhCCCCCCCCccccccCCCCchHHHHHHHHH
Confidence            999996432 11235567788999999999999999888899999999999864 3356778888889999999999999


Q ss_pred             HHHHHHhhcCCCcEEEEecC
Q 025786          229 DIILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       229 ~l~~~~~~~~gi~~~~v~Pf  248 (248)
                      .+++.++.++|++++++||.
T Consensus       146 ~~~~~~~~~~~~~~~~lR~~  165 (317)
T 3ajr_A          146 LLGQYYYEKFGLDVRSLRYP  165 (317)
T ss_dssp             HHHHHHHHHHCCEEEEEEEC
T ss_pred             HHHHHHHHhcCCeEEEEecC
Confidence            99999998899999999973

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=99.94  E-value=1.6e-26  Score=191.10  Aligned_cols=162  Identities=14%  Similarity=0.173  Sum_probs=126.1

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~  144 (248)
                      +|+++||||+||||++++++|+++|++|++++|+..   .+.+..+++   +.++.++++|++|.+++++++++     +
T Consensus         8 gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~---~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   81 (255)
T 4eso_A            8 GKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNES---NIARIREEF---GPRVHALRSDIADLNEIAVLGAAAGQTLG   81 (255)
T ss_dssp             TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHH---HHHHHHHHH---GGGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHH---HHHHHHHHh---CCcceEEEccCCCHHHHHHHHHHHHHHhC
Confidence            399999999999999999999999999999996432   333333333   34789999999999999888765     6


Q ss_pred             CCCEEEEcccccccCCCCCCc----hhhHhhhHHHHHHHHHHHHHc--CCCEEEEeccceecCCCCCCCCCCCCCCCCCC
Q 025786          145 AFDAVMHFAAVAYVGESTLDP----LKYYHNITSNTLVVLESMARH--GVDTLIYSSTCATYGEPEKMPITEETPQAPIN  218 (248)
Q Consensus       145 ~iD~li~~Ag~~~~~~~~~~~----~~~~~~~~~~~~~ll~~~~~~--~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~  218 (248)
                      ++|+||||||+....+..+.+    +..++.|+.++..+.+.+...  ..++||++||.+.+.           +.++..
T Consensus        82 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~~~  150 (255)
T 4eso_A           82 AIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADEG-----------GHPGMS  150 (255)
T ss_dssp             SEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGGSS-----------BCTTBH
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhhcC-----------CCCCch
Confidence            899999999987554433333    334556666666666666542  246999999988763           344577


Q ss_pred             hHHHHHHHHHHHHHHHhhcC---CCcEEEEecC
Q 025786          219 PYGKAKKMAEDIILDFSKNS---DMAVLQCHRF  248 (248)
Q Consensus       219 ~Y~~sK~a~e~l~~~~~~~~---gi~~~~v~Pf  248 (248)
                      .|+.||++.+.+++.++.++   |+++++++|.
T Consensus       151 ~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG  183 (255)
T 4eso_A          151 VYSASKAALVSFASVLAAELLPRGIRVNSVSPG  183 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTGGGTCEEEEEEEC
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhCcEEEEEecC
Confidence            99999999999999999885   8999999993

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=99.94  E-value=5.1e-26  Score=187.43  Aligned_cols=163  Identities=15%  Similarity=0.111  Sum_probs=124.4

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCce-EEEEccCCCHHHHHHHhhc----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRL-QFIYADLGDAKAVNKFFSE----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~Dl~~~~~~~~~~~~----~~  145 (248)
                      |+++||||+||||++++++|+++|++|++++|+..   ...+..+++   +.++ .++.+|++|.+++++++++    ++
T Consensus        12 k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~---~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   85 (254)
T 2wsb_A           12 ACAAVTGAGSGIGLEICRAFAASGARLILIDREAA---ALDRAAQEL---GAAVAARIVADVTDAEAMTAAAAEAEAVAP   85 (254)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHH---HHHHHHHHH---GGGEEEEEECCTTCHHHHHHHHHHHHHHSC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHH---HHHHHHHHh---cccceeEEEEecCCHHHHHHHHHHHHhhCC
Confidence            89999999999999999999999999999997532   222222333   2356 8899999999999988865    68


Q ss_pred             CCEEEEcccccccCCCCCCch----hhHhhhHHH----HHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYVGESTLDPL----KYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (248)
Q Consensus       146 iD~li~~Ag~~~~~~~~~~~~----~~~~~~~~~----~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (248)
                      +|+||||||........+.+.    ..++.|+.+    +..+++.|++++.++||++||..++...         +..+.
T Consensus        86 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~---------~~~~~  156 (254)
T 2wsb_A           86 VSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIVN---------RPQFA  156 (254)
T ss_dssp             CCEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC---------SSSCB
T ss_pred             CcEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEecchhccCC---------CCCcc
Confidence            999999999865444333333    344456656    4456677777777899999998776321         22234


Q ss_pred             ChHHHHHHHHHHHHHHHhhcC---CCcEEEEecC
Q 025786          218 NPYGKAKKMAEDIILDFSKNS---DMAVLQCHRF  248 (248)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~~~~~---gi~~~~v~Pf  248 (248)
                      ..|+.||++.+.+++.++.++   |+++++++|.
T Consensus       157 ~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg  190 (254)
T 2wsb_A          157 SSYMASKGAVHQLTRALAAEWAGRGVRVNALAPG  190 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEec
Confidence            789999999999999999885   8999999994

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=99.94  E-value=7.1e-26  Score=185.59  Aligned_cols=164  Identities=15%  Similarity=0.142  Sum_probs=125.0

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC-------EEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY-------RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE  143 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~-------~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~  143 (248)
                      |+|+||||+||||++++++|+++|+       +|++++|+..   ...+..+++...+.++.++.+|++|.+++++++++
T Consensus         3 k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~   79 (244)
T 2bd0_A            3 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAA---DLEKISLECRAEGALTDTITADISDMADVRRLTTH   79 (244)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHH---HHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHH
T ss_pred             CEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHH---HHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHH
Confidence            8999999999999999999999999       9999987432   22222233323345788999999999999988875


Q ss_pred             -----CCCCEEEEcccccccCCCCCC----chhhHhhhHHHHHH----HHHHHHHcCCCEEEEeccceecCCCCCCCCCC
Q 025786          144 -----NAFDAVMHFAAVAYVGESTLD----PLKYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITE  210 (248)
Q Consensus       144 -----~~iD~li~~Ag~~~~~~~~~~----~~~~~~~~~~~~~~----ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e  210 (248)
                           +++|+||||||........+.    .+..++.|+.++..    +++.|++.+.++||++||..++.         
T Consensus        80 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~---------  150 (244)
T 2bd0_A           80 IVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATK---------  150 (244)
T ss_dssp             HHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS---------
T ss_pred             HHHhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecchhcC---------
Confidence                 589999999998644332222    23345566666544    45556666778999999988763         


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          211 ETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       211 ~~~~~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                        +.++...|+.||++.+.+++.++.+   +|+++++++|.
T Consensus       151 --~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg  189 (244)
T 2bd0_A          151 --AFRHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPG  189 (244)
T ss_dssp             --CCTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEEC
T ss_pred             --CCCCCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEECC
Confidence              3345778999999999999998875   68999999994

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=99.94  E-value=4.2e-26  Score=192.45  Aligned_cols=167  Identities=16%  Similarity=0.117  Sum_probs=126.0

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~  144 (248)
                      +|++|||||+||||++++++|+++|++|++++|... .+...+..+.+...+.++.++.+|++|.+++++++++     +
T Consensus        49 ~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  127 (294)
T 3r3s_A           49 DRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAE-EEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREALG  127 (294)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGG-HHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHHHT
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcc-hhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            499999999999999999999999999999886421 1112222222222245789999999999999888875     6


Q ss_pred             CCCEEEEccccccc-CCCCC----CchhhHhhhHHHHHHHHHHHHHc--CCCEEEEeccceecCCCCCCCCCCCCCCCCC
Q 025786          145 AFDAVMHFAAVAYV-GESTL----DPLKYYHNITSNTLVVLESMARH--GVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (248)
Q Consensus       145 ~iD~li~~Ag~~~~-~~~~~----~~~~~~~~~~~~~~~ll~~~~~~--~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (248)
                      ++|+||||||.... ....+    ..+..++.|+.++..+.+.+...  +.++||++||..++.           +.++.
T Consensus       128 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~~~~-----------~~~~~  196 (294)
T 3r3s_A          128 GLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQAYQ-----------PSPHL  196 (294)
T ss_dssp             CCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGGGTS-----------CCTTC
T ss_pred             CCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChhhcc-----------CCCCc
Confidence            89999999997542 22222    22345566777777777776553  236999999988873           34457


Q ss_pred             ChHHHHHHHHHHHHHHHhhcC---CCcEEEEecC
Q 025786          218 NPYGKAKKMAEDIILDFSKNS---DMAVLQCHRF  248 (248)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~~~~~---gi~~~~v~Pf  248 (248)
                      ..|+.||++.+.+++.++.++   |+++++|+|.
T Consensus       197 ~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG  230 (294)
T 3r3s_A          197 LDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPG  230 (294)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEEC
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecC
Confidence            789999999999999999885   8999999994

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=99.94  E-value=5.5e-26  Score=184.92  Aligned_cols=160  Identities=16%  Similarity=0.195  Sum_probs=121.3

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc--CCCC
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE--NAFD  147 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~~iD  147 (248)
                      ||++|||||+||||++++++|+++|++|++++|+.   +.+.+..+++   +.++.++.+|++|.+++++++++  ...|
T Consensus         1 Mk~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~---~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~d   74 (230)
T 3guy_A            1 MSLIVITGASSGLGAELAKLYDAEGKATYLTGRSE---SKLSTVTNCL---SNNVGYRARDLASHQEVEQLFEQLDSIPS   74 (230)
T ss_dssp             --CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCH---HHHHHHHHTC---SSCCCEEECCTTCHHHHHHHHHSCSSCCS
T ss_pred             CCEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCH---HHHHHHHHHH---hhccCeEeecCCCHHHHHHHHHHHhhcCC
Confidence            58999999999999999999999999999999643   2233333333   35788999999999999999986  3459


Q ss_pred             EEEEcccccccCCCCCCchh----hHhhhHHHHHHH----HHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCCCh
Q 025786          148 AVMHFAAVAYVGESTLDPLK----YYHNITSNTLVV----LESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINP  219 (248)
Q Consensus       148 ~li~~Ag~~~~~~~~~~~~~----~~~~~~~~~~~l----l~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~  219 (248)
                      +||||||........+.+.+    .++.|+.++..+    ++.|.+++ ++||++||...+.           +.++...
T Consensus        75 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~iv~isS~~~~~-----------~~~~~~~  142 (230)
T 3guy_A           75 TVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQP-VNVVMIMSTAAQQ-----------PKAQEST  142 (230)
T ss_dssp             EEEECCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSC-CEEEEECCGGGTS-----------CCTTCHH
T ss_pred             EEEEeCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CeEEEEeecccCC-----------CCCCCch
Confidence            99999998655443333333    445566665554    44444444 3999999987762           3445779


Q ss_pred             HHHHHHHHHHHHHHHhhcC---CCcEEEEec
Q 025786          220 YGKAKKMAEDIILDFSKNS---DMAVLQCHR  247 (248)
Q Consensus       220 Y~~sK~a~e~l~~~~~~~~---gi~~~~v~P  247 (248)
                      |+.||++.+.+++.++.++   |+++++++|
T Consensus       143 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~P  173 (230)
T 3guy_A          143 YCAVKWAVKGLIESVRLELKGKPMKIIAVYP  173 (230)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTSSCEEEEEEE
T ss_pred             hHHHHHHHHHHHHHHHHHHHhcCeEEEEEEC
Confidence            9999999999999999985   799999998

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=99.94  E-value=7e-26  Score=187.43  Aligned_cols=165  Identities=15%  Similarity=0.113  Sum_probs=123.9

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      |+|+||||+||||++++++|+++|++|++++|.  +.+...+..+++...+.++.++.+|++|.+++.+++++     ++
T Consensus         8 k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~--~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   85 (261)
T 1gee_A            8 KVVVITGSSTGLGKSMAIRFATEKAKVVVNYRS--KEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGK   85 (261)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESS--CHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCC--ChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            899999999999999999999999999999872  12222222222222245788999999999999888875     58


Q ss_pred             CCEEEEcccccccCCCCCC----chhhHhhhHHHHHH----HHHHHHHcC-CCEEEEeccceecCCCCCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYVGESTLD----PLKYYHNITSNTLV----VLESMARHG-VDTLIYSSTCATYGEPEKMPITEETPQAP  216 (248)
Q Consensus       146 iD~li~~Ag~~~~~~~~~~----~~~~~~~~~~~~~~----ll~~~~~~~-~~~iV~~SS~~~~g~~~~~~~~e~~~~~~  216 (248)
                      +|+||||||........+.    .+..++.|+.++..    +++.|.+++ .++||++||...+           .+.++
T Consensus        86 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~-----------~~~~~  154 (261)
T 1gee_A           86 LDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEK-----------IPWPL  154 (261)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGT-----------SCCTT
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhc-----------CCCCC
Confidence            9999999997654332222    23345566655444    566666665 6899999997765           24456


Q ss_pred             CChHHHHHHHHHHHHHHHhhcC---CCcEEEEecC
Q 025786          217 INPYGKAKKMAEDIILDFSKNS---DMAVLQCHRF  248 (248)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~~~~~---gi~~~~v~Pf  248 (248)
                      ...|+.||++.+.+++.++.++   |+++++++|.
T Consensus       155 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg  189 (261)
T 1gee_A          155 FVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPG  189 (261)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEEC
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeC
Confidence            7899999999999999998874   8999999994

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=99.94  E-value=4.1e-26  Score=189.30  Aligned_cols=168  Identities=15%  Similarity=0.131  Sum_probs=123.7

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~  144 (248)
                      ||+++||||+||||++++++|+++|++|++++|....  ......+.....+.++.++++|++|.+++++++++     +
T Consensus         7 ~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   84 (264)
T 3i4f_A            7 VRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTT--AMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHFG   84 (264)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHH--HHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             cCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChH--HHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            4899999999999999999999999999999764322  11111122212245789999999999999988875     5


Q ss_pred             CCCEEEEcccc--cccCCCCCCc----hhhHhhhHHHHHH----HHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCC
Q 025786          145 AFDAVMHFAAV--AYVGESTLDP----LKYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQ  214 (248)
Q Consensus       145 ~iD~li~~Ag~--~~~~~~~~~~----~~~~~~~~~~~~~----ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~  214 (248)
                      ++|+||||||+  .......+.+    +..++.|+.++..    +++.|++++.++||++||...++.         .+.
T Consensus        85 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~---------~~~  155 (264)
T 3i4f_A           85 KIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGADSA---------PGW  155 (264)
T ss_dssp             CCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTTGGGC---------CCC
T ss_pred             CCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCeEEEEeechhccc---------CCC
Confidence            89999999994  2222222222    3345566655444    566667777789999998744321         233


Q ss_pred             CCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          215 APINPYGKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       215 ~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                      ++...|+.||++.+.+++.++.+   .|+++++++|.
T Consensus       156 ~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG  192 (264)
T 3i4f_A          156 IYRSAFAAAKVGLVSLTKTVAYEEAEYGITANMVCPG  192 (264)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEccC
Confidence            45679999999999999999988   68999999983

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=99.94  E-value=6.2e-26  Score=190.44  Aligned_cols=165  Identities=14%  Similarity=0.077  Sum_probs=125.3

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~  144 (248)
                      +|+|+||||+||||++++++|+++|++|++++|+..+   ..+..+++...+.++.++.+|++|.+++++++++     +
T Consensus        44 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~---~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~  120 (285)
T 2c07_A           44 NKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKS---CDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHK  120 (285)
T ss_dssp             SCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHH---HHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHH---HHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhcC
Confidence            3899999999999999999999999999998764322   2222333323345788999999999999988865     5


Q ss_pred             CCCEEEEcccccccCCCCCCc----hhhHhhhHHH----HHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCC
Q 025786          145 AFDAVMHFAAVAYVGESTLDP----LKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (248)
Q Consensus       145 ~iD~li~~Ag~~~~~~~~~~~----~~~~~~~~~~----~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~  216 (248)
                      ++|+||||||........+.+    +..++.|+.+    +..+++.|.+.+.++||++||..++.           +.++
T Consensus       121 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~-----------~~~~  189 (285)
T 2c07_A          121 NVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLT-----------GNVG  189 (285)
T ss_dssp             CCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHH-----------CCTT
T ss_pred             CCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhcc-----------CCCC
Confidence            899999999986544333322    3345566666    44466666677778999999987652           2234


Q ss_pred             CChHHHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          217 INPYGKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                      ...|+.||++.+.+++.++.+   .|+++++++|.
T Consensus       190 ~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg  224 (285)
T 2c07_A          190 QANYSSSKAGVIGFTKSLAKELASRNITVNAIAPG  224 (285)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred             CchHHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeC
Confidence            678999999999999999987   48999999983

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=99.94  E-value=1.9e-26  Score=197.57  Aligned_cols=174  Identities=22%  Similarity=0.244  Sum_probs=130.0

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~l  149 (248)
                      +|+||||||+||||++++++|+++|++|+++.|+......... +.++.....++.++.+|++|.+++.++++  ++|+|
T Consensus         5 ~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~V   81 (337)
T 2c29_D            5 SETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKH-LLDLPKAETHLTLWKADLADEGSFDEAIK--GCTGV   81 (337)
T ss_dssp             -CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHH-HHTSTTHHHHEEEEECCTTSTTTTHHHHT--TCSEE
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHH-HHhcccCCCeEEEEEcCCCCHHHHHHHHc--CCCEE
Confidence            3899999999999999999999999999988875432211111 11111001257889999999999999887  68999


Q ss_pred             EEcccccccCCCCCCch-hhHhhhHHHHHHHHHHHHHcC-CCEEEEeccceec-CCCC-CCCCCCCCCC---------CC
Q 025786          150 MHFAAVAYVGESTLDPL-KYYHNITSNTLVVLESMARHG-VDTLIYSSTCATY-GEPE-KMPITEETPQ---------AP  216 (248)
Q Consensus       150 i~~Ag~~~~~~~~~~~~-~~~~~~~~~~~~ll~~~~~~~-~~~iV~~SS~~~~-g~~~-~~~~~e~~~~---------~~  216 (248)
                      ||+|+...  ....++. +.++.|+.++.++++++.+.+ .++||++||.+++ +... ..+++|+.+.         ++
T Consensus        82 ih~A~~~~--~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~riV~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~  159 (337)
T 2c29_D           82 FHVATPMD--FESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTVNIQEHQLPVYDESCWSDMEFCRAKKMT  159 (337)
T ss_dssp             EECCCCCC--SSCSSHHHHTHHHHHHHHHHHHHHHHHHSCCCEEEEECCGGGTSCSSSCCSEECTTCCCCHHHHHHHCCT
T ss_pred             EEeccccC--CCCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEEEeeeHhhcccCCCCCcccCcccCCchhhhcccCCc
Confidence            99998642  1222333 477889999999999998876 7899999998744 4322 2345565432         13


Q ss_pred             CChHHHHHHHHHHHHHHHhhcCCCcEEEEecC
Q 025786          217 INPYGKAKKMAEDIILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~~~~~gi~~~~v~Pf  248 (248)
                      ..+|+.||.++|.+++.+++++|++++++||+
T Consensus       160 ~~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~  191 (337)
T 2c29_D          160 AWMYFVSKTLAEQAAWKYAKENNIDFITIIPT  191 (337)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHTCCEEEEEEC
T ss_pred             cchHHHHHHHHHHHHHHHHHHcCCcEEEEeCC
Confidence            45799999999999999988889999999996

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=99.94  E-value=3.8e-26  Score=190.98  Aligned_cols=165  Identities=18%  Similarity=0.152  Sum_probs=125.6

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~  144 (248)
                      +|+++||||+||||++++++|+++|++|++++|+....+...+.++..   +.++.++.+|++|.+++++++++     +
T Consensus        34 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g  110 (279)
T 3ctm_A           34 GKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTY---GVHSKAYKCNISDPKSVEETISQQEKDFG  110 (279)
T ss_dssp             TCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHH---CSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCcceEEEeecCCHHHHHHHHHHHHHHhC
Confidence            389999999999999999999999999999998654433333333322   34688999999999999988875     5


Q ss_pred             CCCEEEEccccccc-CCCC-CCch----hhHhhhHHH----HHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCC
Q 025786          145 AFDAVMHFAAVAYV-GEST-LDPL----KYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQ  214 (248)
Q Consensus       145 ~iD~li~~Ag~~~~-~~~~-~~~~----~~~~~~~~~----~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~  214 (248)
                      ++|+||||||.... .... +.+.    ..++.|+.+    ++.+++.|++++.++||++||..++..         .+.
T Consensus       111 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~---------~~~  181 (279)
T 3ctm_A          111 TIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKGSLIITSSISGKIV---------NIP  181 (279)
T ss_dssp             CCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCCTTSCC------------
T ss_pred             CCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEECchHhccC---------CCC
Confidence            79999999998654 3322 2222    344556666    567888888887889999999776521         013


Q ss_pred             CCCChHHHHHHHHHHHHHHHhhcC---CCcEEEEec
Q 025786          215 APINPYGKAKKMAEDIILDFSKNS---DMAVLQCHR  247 (248)
Q Consensus       215 ~~~~~Y~~sK~a~e~l~~~~~~~~---gi~~~~v~P  247 (248)
                      ++...|+.||++.+.+++.++.++   + ++++++|
T Consensus       182 ~~~~~Y~~sK~a~~~~~~~la~e~~~~~-~v~~v~P  216 (279)
T 3ctm_A          182 QLQAPYNTAKAACTHLAKSLAIEWAPFA-RVNTISP  216 (279)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHTTTTC-EEEEEEE
T ss_pred             CCcccHHHHHHHHHHHHHHHHHHhcccC-CEEEEec
Confidence            456789999999999999999884   6 8999998

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=99.94  E-value=1.7e-26  Score=192.09  Aligned_cols=165  Identities=18%  Similarity=0.144  Sum_probs=124.3

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~  144 (248)
                      +|+++||||+||||++++++|+++|++|+++++  ++.+...+..+++.....++.++.+|++|.+++++++++     +
T Consensus        26 ~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~--r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g  103 (267)
T 4iiu_A           26 SRSVLVTGASKGIGRAIARQLAADGFNIGVHYH--RDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQHG  103 (267)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES--SCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeC--CchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            389999999999999999999999999987654  222333333333333356789999999999999988875     6


Q ss_pred             CCCEEEEcccccccCCCCCC----chhhHhhhHHHHHHHHH----HHH-HcCCCEEEEeccceecCCCCCCCCCCCCCCC
Q 025786          145 AFDAVMHFAAVAYVGESTLD----PLKYYHNITSNTLVVLE----SMA-RHGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (248)
Q Consensus       145 ~iD~li~~Ag~~~~~~~~~~----~~~~~~~~~~~~~~ll~----~~~-~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~  215 (248)
                      ++|+||||||+.......+.    .+..++.|+.++.++++    .+. +.+.++||++||...+.           +.+
T Consensus       104 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~  172 (267)
T 4iiu_A          104 AWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVM-----------GNR  172 (267)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHH-----------CCT
T ss_pred             CccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhcc-----------CCC
Confidence            89999999998754433222    23345566666555444    343 45668999999977662           334


Q ss_pred             CCChHHHHHHHHHHHHHHHhhcC---CCcEEEEec
Q 025786          216 PINPYGKAKKMAEDIILDFSKNS---DMAVLQCHR  247 (248)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~~~~~---gi~~~~v~P  247 (248)
                      +...|+.||++.+.+++.++.++   |+++++++|
T Consensus       173 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~P  207 (267)
T 4iiu_A          173 GQVNYSAAKAGIIGATKALAIELAKRKITVNCIAP  207 (267)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE
T ss_pred             CCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEE
Confidence            57789999999999999999884   899999998

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=99.94  E-value=7.3e-26  Score=184.65  Aligned_cols=164  Identities=15%  Similarity=0.138  Sum_probs=121.0

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~  144 (248)
                      ||+++||||+||||++++++|+++|++|++++|+..+.++..+.+.+.  .+.++.++++|++|.+++++++++     +
T Consensus         2 ~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   79 (235)
T 3l77_A            2 MKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQE--QGVEVFYHHLDVSKAESVEEFSKKVLERFG   79 (235)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH--HCCCEEEEECCTTCHHHHHHHCC-HHHHHS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhh--cCCeEEEEEeccCCHHHHHHHHHHHHHhcC
Confidence            489999999999999999999999999999997544333333322211  145789999999999999998875     5


Q ss_pred             CCCEEEEcccccccCCCCCCchh----hHhhhHHHHHH----HHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCC
Q 025786          145 AFDAVMHFAAVAYVGESTLDPLK----YYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (248)
Q Consensus       145 ~iD~li~~Ag~~~~~~~~~~~~~----~~~~~~~~~~~----ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~  216 (248)
                      ++|+||||||+.......+.+.+    .++.|+.++..    +++.|.+. .+++|++||...+.           +.+.
T Consensus        80 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~~ii~~sS~~~~~-----------~~~~  147 (235)
T 3l77_A           80 DVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRT-GGLALVTTSDVSAR-----------LIPY  147 (235)
T ss_dssp             SCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCGGGSS-----------CCTT
T ss_pred             CCCEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCcEEEEecchhcc-----------cCCC
Confidence            89999999998765544333333    34455555444    55555333 46788877765542           2334


Q ss_pred             CChHHHHHHHHHHHHHHHhhc-CCCcEEEEec
Q 025786          217 INPYGKAKKMAEDIILDFSKN-SDMAVLQCHR  247 (248)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~~~~-~gi~~~~v~P  247 (248)
                      ...|+.||++.+.+++.+..+ .|+++++++|
T Consensus       148 ~~~Y~~sKaa~~~~~~~l~~~~~~i~v~~v~P  179 (235)
T 3l77_A          148 GGGYVSTKWAARALVRTFQIENPDVRFFELRP  179 (235)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEE
T ss_pred             cchHHHHHHHHHHHHHHHhhcCCCeEEEEEeC
Confidence            568999999999999999655 5899999998

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=99.94  E-value=7e-27  Score=198.39  Aligned_cols=165  Identities=28%  Similarity=0.407  Sum_probs=133.1

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~l  149 (248)
                      +|+||||||||+||++++++|+++|++|++++|.........+.+.... ...++.++.+|++            ++|+|
T Consensus         7 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~------------~~d~v   73 (321)
T 3vps_A            7 KHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFL-EKPVLELEERDLS------------DVRLV   73 (321)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSEEE-CSCGGGCCHHHHT------------TEEEE
T ss_pred             CCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhhhc-cCCCeeEEeCccc------------cCCEE
Confidence            4899999999999999999999999999999986542111111111111 1234555666665            58999


Q ss_pred             EEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCCChHHHHHHHHHH
Q 025786          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAED  229 (248)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e~  229 (248)
                      ||+||..........+...+. |+.++.++++++.+.+.++||++||..+|+.....+++|+.+..|.+.|+.||.++|.
T Consensus        74 i~~a~~~~~~~~~~~~~~~~~-n~~~~~~ll~a~~~~~v~~~v~~SS~~v~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~  152 (321)
T 3vps_A           74 YHLASHKSVPRSFKQPLDYLD-NVDSGRHLLALCTSVGVPKVVVGSTCEVYGQADTLPTPEDSPLSPRSPYAASKVGLEM  152 (321)
T ss_dssp             EECCCCCCHHHHTTSTTTTHH-HHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHH
T ss_pred             EECCccCChHHHHhCHHHHHH-HHHHHHHHHHHHHHcCCCeEEEecCHHHhCCCCCCCCCCCCCCCCCChhHHHHHHHHH
Confidence            999997654333445566677 9999999999999998899999999999998888889999999999999999999999


Q ss_pred             HHHHHhhcCCC-cEEEEecC
Q 025786          230 IILDFSKNSDM-AVLQCHRF  248 (248)
Q Consensus       230 l~~~~~~~~gi-~~~~v~Pf  248 (248)
                      +++.++.++++ +++++||.
T Consensus       153 ~~~~~~~~~~~~~~~ilRp~  172 (321)
T 3vps_A          153 VAGAHQRASVAPEVGIVRFF  172 (321)
T ss_dssp             HHHHHHHSSSSCEEEEEEEC
T ss_pred             HHHHHHHHcCCCceEEEEec
Confidence            99999999999 99999985

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=99.94  E-value=1e-25  Score=186.12  Aligned_cols=160  Identities=14%  Similarity=0.154  Sum_probs=122.6

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCC--CEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDS--YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----  143 (248)
                      |+++||||++|||++++++|+++|  +.|++++|+.   +.+.+..+++   +.++.++.+|++|.+++++++++     
T Consensus         3 k~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~---~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   76 (254)
T 3kzv_A            3 KVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSE---APLKKLKEKY---GDRFFYVVGDITEDSVLKQLVNAAVKGH   76 (254)
T ss_dssp             CEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCH---HHHHHHHHHH---GGGEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred             CEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCH---HHHHHHHHHh---CCceEEEECCCCCHHHHHHHHHHHHHhc
Confidence            899999999999999999999985  7888887643   2233333333   34789999999999999988875     


Q ss_pred             CCCCEEEEccccccc-CCCCCCchh----hHhhhHHHHHH----HHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCC
Q 025786          144 NAFDAVMHFAAVAYV-GESTLDPLK----YYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQ  214 (248)
Q Consensus       144 ~~iD~li~~Ag~~~~-~~~~~~~~~----~~~~~~~~~~~----ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~  214 (248)
                      +++|+||||||+... ....+.+.+    .++.|+.++..    +++.|++.+ ++||++||...+.           +.
T Consensus        77 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-g~iv~isS~~~~~-----------~~  144 (254)
T 3kzv_A           77 GKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTN-GNVVFVSSDACNM-----------YF  144 (254)
T ss_dssp             SCCCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCSCCCC-----------SS
T ss_pred             CCccEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEcCchhcc-----------CC
Confidence            689999999998543 333333333    34455555444    566667766 8999999987762           34


Q ss_pred             CCCChHHHHHHHHHHHHHHHhhcC-CCcEEEEecC
Q 025786          215 APINPYGKAKKMAEDIILDFSKNS-DMAVLQCHRF  248 (248)
Q Consensus       215 ~~~~~Y~~sK~a~e~l~~~~~~~~-gi~~~~v~Pf  248 (248)
                      ++...|+.||++.+.+++.++.++ |+++++|+|-
T Consensus       145 ~~~~~Y~asK~a~~~~~~~la~e~~~i~vn~v~PG  179 (254)
T 3kzv_A          145 SSWGAYGSSKAALNHFAMTLANEERQVKAIAVAPG  179 (254)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHHHHCTTSEEEEEECS
T ss_pred             CCcchHHHHHHHHHHHHHHHHhhccCcEEEEEeCC
Confidence            557799999999999999999885 8999999983

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=99.94  E-value=8e-26  Score=187.24  Aligned_cols=160  Identities=17%  Similarity=0.202  Sum_probs=122.7

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      |+++||||++|||++++++|+++|++|++++|+..   .+.+..+++   +.++.++.+|++|.+++++++++     ++
T Consensus        10 k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~---~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   83 (261)
T 3n74_A           10 KVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKA---GAERVAGEI---GDAALAVAADISKEADVDAAVEAALSKFGK   83 (261)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHH---HHHHHHHHH---CTTEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHH---HHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence            99999999999999999999999999999996433   333333333   34789999999999999988875     58


Q ss_pred             CCEEEEccccccc-CCCCCCc----hhhHhhhHHH----HHHHHHHHHHcC----CCEEEEeccceecCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYV-GESTLDP----LKYYHNITSN----TLVVLESMARHG----VDTLIYSSTCATYGEPEKMPITEET  212 (248)
Q Consensus       146 iD~li~~Ag~~~~-~~~~~~~----~~~~~~~~~~----~~~ll~~~~~~~----~~~iV~~SS~~~~g~~~~~~~~e~~  212 (248)
                      +|+||||||+... ....+.+    +..++.|+.+    ++.+++.|.+++    .++||++||...+           .
T Consensus        84 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~-----------~  152 (261)
T 3n74_A           84 VDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAG-----------R  152 (261)
T ss_dssp             CCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTT-----------S
T ss_pred             CCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhc-----------C
Confidence            9999999998642 2222222    2334455555    344666676553    4689999997765           2


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          213 PQAPINPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       213 ~~~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      +.+....|+.||++.+.+++.++.+   .|+++++++|
T Consensus       153 ~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~P  190 (261)
T 3n74_A          153 PRPNLAWYNATKGWVVSVTKALAIELAPAKIRVVALNP  190 (261)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE
T ss_pred             CCCCccHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEec
Confidence            3445778999999999999999988   5899999998

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=99.94  E-value=1.3e-25  Score=184.67  Aligned_cols=163  Identities=18%  Similarity=0.223  Sum_probs=124.1

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      |+++||||+||||++++++|+++|++|++++|+..   ...+..+++.. ..++.++.+|++|.+++.+++++     ++
T Consensus         7 k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~---~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (251)
T 1zk4_A            7 KVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSD---VGEKAAKSVGT-PDQIQFFQHDSSDEDGWTKLFDATEKAFGP   82 (251)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHH---HHHHHHHHHCC-TTTEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             cEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHH---HHHHHHHHhhc-cCceEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            89999999999999999999999999999997532   22222233322 25789999999999999988875     57


Q ss_pred             CCEEEEcccccccCCCCCCch----hhHhhhHHHH----HHHHHHHHHcCC-CEEEEeccceecCCCCCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYVGESTLDPL----KYYHNITSNT----LVVLESMARHGV-DTLIYSSTCATYGEPEKMPITEETPQAP  216 (248)
Q Consensus       146 iD~li~~Ag~~~~~~~~~~~~----~~~~~~~~~~----~~ll~~~~~~~~-~~iV~~SS~~~~g~~~~~~~~e~~~~~~  216 (248)
                      +|+||||||........+.+.    ..++.|+.++    ..+++.|++.+. ++||++||..++.           +.++
T Consensus        83 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~-----------~~~~  151 (251)
T 1zk4_A           83 VSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFV-----------GDPS  151 (251)
T ss_dssp             CCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTS-----------CCTT
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhcc-----------CCCC
Confidence            999999999865443333333    3445555543    446777766665 7999999988763           2345


Q ss_pred             CChHHHHHHHHHHHHHHHhh-----cCCCcEEEEecC
Q 025786          217 INPYGKAKKMAEDIILDFSK-----NSDMAVLQCHRF  248 (248)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~~~-----~~gi~~~~v~Pf  248 (248)
                      ...|+.||++.+.+++.++.     ..|+++++++|.
T Consensus       152 ~~~Y~~sK~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg  188 (251)
T 1zk4_A          152 LGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPG  188 (251)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEEC
T ss_pred             CccchHHHHHHHHHHHHHHHHhcccCCCeEEEEEeeC
Confidence            67999999999999999886     468999999994

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=99.94  E-value=7.1e-26  Score=193.91  Aligned_cols=162  Identities=23%  Similarity=0.291  Sum_probs=129.6

Q ss_pred             CceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 025786           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (248)
Q Consensus        69 ~~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~  148 (248)
                      .||+||||||+||||++++++|+++|++|++++|......   +.+..    ..++.++.+|++|.+++.++++..++|+
T Consensus        20 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---~~l~~----~~~~~~~~~Dl~d~~~~~~~~~~~~~D~   92 (333)
T 2q1w_A           20 HMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRR---EHLKD----HPNLTFVEGSIADHALVNQLIGDLQPDA   92 (333)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCG---GGSCC----CTTEEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccch---hhHhh----cCCceEEEEeCCCHHHHHHHHhccCCcE
Confidence            3489999999999999999999999999999997543221   11111    1368889999999999999998556999


Q ss_pred             EEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecC----CCCCCCCCCCCCCCCC-ChHHHH
Q 025786          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYG----EPEKMPITEETPQAPI-NPYGKA  223 (248)
Q Consensus       149 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g----~~~~~~~~e~~~~~~~-~~Y~~s  223 (248)
                      ||||||..... ...++ + ++.|+.++.++++++.+.+.++||++||.++|+    .... +++|+.  .|. +.|+.|
T Consensus        93 vih~A~~~~~~-~~~~~-~-~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~g~~~~~~~~-~~~E~~--~p~~~~Y~~s  166 (333)
T 2q1w_A           93 VVHTAASYKDP-DDWYN-D-TLTNCVGGSNVVQAAKKNNVGRFVYFQTALCYGVKPIQQPV-RLDHPR--NPANSSYAIS  166 (333)
T ss_dssp             EEECCCCCSCT-TCHHH-H-HHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGCSCCCSSSB-CTTSCC--CCTTCHHHHH
T ss_pred             EEECceecCCC-ccCCh-H-HHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhCCCcccCCC-CcCCCC--CCCCCchHHH
Confidence            99999976432 21222 2 788899999999999988888999999999998    5444 777776  566 899999


Q ss_pred             HHHHHHHHHH-HhhcCCCcEEEEecC
Q 025786          224 KKMAEDIILD-FSKNSDMAVLQCHRF  248 (248)
Q Consensus       224 K~a~e~l~~~-~~~~~gi~~~~v~Pf  248 (248)
                      |.++|.+++. ++     +++++||+
T Consensus       167 K~~~E~~~~~s~~-----~~~ilR~~  187 (333)
T 2q1w_A          167 KSANEDYLEYSGL-----DFVTFRLA  187 (333)
T ss_dssp             HHHHHHHHHHHTC-----CEEEEEES
T ss_pred             HHHHHHHHHhhhC-----CeEEEeec
Confidence            9999999988 75     67888874

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=99.94  E-value=7.5e-26  Score=186.42  Aligned_cols=164  Identities=13%  Similarity=0.137  Sum_probs=125.0

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      |+++||||+||||++++++|+++|++|++++|+....+..   .+++...+.++.++.+|++|++++++++++     ++
T Consensus        12 ~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~---~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   88 (255)
T 1fmc_A           12 KCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHV---VDEIQQLGGQAFACRCDITSEQELSALADFAISKLGK   88 (255)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHH---HHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH---HHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence            8999999999999999999999999999999754332222   222222245788999999999999988864     58


Q ss_pred             CCEEEEcccccccCCCCC---CchhhHhhhHHHHHH----HHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYVGESTL---DPLKYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPIN  218 (248)
Q Consensus       146 iD~li~~Ag~~~~~~~~~---~~~~~~~~~~~~~~~----ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~  218 (248)
                      +|+||||||.......+.   ..+..++.|+.++.+    +++.|++.+.++||++||...+.           +.++..
T Consensus        89 ~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~-----------~~~~~~  157 (255)
T 1fmc_A           89 VDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAEN-----------KNINMT  157 (255)
T ss_dssp             CCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTC-----------CCTTCH
T ss_pred             CCEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcC-----------CCCCCc
Confidence            999999999865433221   223445566666554    44555566778999999988763           334577


Q ss_pred             hHHHHHHHHHHHHHHHhhcC---CCcEEEEecC
Q 025786          219 PYGKAKKMAEDIILDFSKNS---DMAVLQCHRF  248 (248)
Q Consensus       219 ~Y~~sK~a~e~l~~~~~~~~---gi~~~~v~Pf  248 (248)
                      .|+.||++.+.+++.++.++   |+++++++|.
T Consensus       158 ~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~Pg  190 (255)
T 1fmc_A          158 SYASSKAAASHLVRNMAFDLGEKNIRVNGIAPG  190 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEC
T ss_pred             ccHHHHHHHHHHHHHHHHHhhhcCcEEEEEecc
Confidence            99999999999999999874   8999999983

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=99.94  E-value=3.1e-26  Score=190.59  Aligned_cols=154  Identities=19%  Similarity=0.162  Sum_probs=120.3

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~  144 (248)
                      +|++|||||+||||++++++|+++|++|++++|+....+              ....+.+|++|.+++.+++++     +
T Consensus        28 gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~--------------~~~~~~~Dv~~~~~~~~~~~~~~~~~g   93 (266)
T 3uxy_A           28 GKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIA--------------ADLHLPGDLREAAYADGLPGAVAAGLG   93 (266)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSC--------------CSEECCCCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH--------------hhhccCcCCCCHHHHHHHHHHHHHhcC
Confidence            399999999999999999999999999999887433211              123457999999999887765     6


Q ss_pred             CCCEEEEcccccccCCCCCCchhh----HhhhHHHHH----HHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCC
Q 025786          145 AFDAVMHFAAVAYVGESTLDPLKY----YHNITSNTL----VVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (248)
Q Consensus       145 ~iD~li~~Ag~~~~~~~~~~~~~~----~~~~~~~~~----~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~  216 (248)
                      ++|+||||||+.......+.+.+.    ++.|+.++.    .+++.|++++.++||++||..++.           +.++
T Consensus        94 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~-----------~~~~  162 (266)
T 3uxy_A           94 RLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGLR-----------PGPG  162 (266)
T ss_dssp             CCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTB-----------CCTT
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCC-----------CCCC
Confidence            899999999987654433333333    445655544    466667777778999999987762           3445


Q ss_pred             CChHHHHHHHHHHHHHHHhhcC---CCcEEEEecC
Q 025786          217 INPYGKAKKMAEDIILDFSKNS---DMAVLQCHRF  248 (248)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~~~~~---gi~~~~v~Pf  248 (248)
                      ...|+.||++.+.+++.++.++   |+++++|+|.
T Consensus       163 ~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG  197 (266)
T 3uxy_A          163 HALYCLTKAALASLTQCMGMDHAPQGIRINAVCPN  197 (266)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEES
T ss_pred             ChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeC
Confidence            7789999999999999999884   8999999993

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=99.94  E-value=3.5e-26  Score=190.95  Aligned_cols=165  Identities=18%  Similarity=0.174  Sum_probs=122.4

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEec-CCCCcchhhhhhhhhcCCCCceEEEEccCCCH----HHHHHHhhc--
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDN-LSRGNIGAVKVLQELFPEPGRLQFIYADLGDA----KAVNKFFSE--  143 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~----~~~~~~~~~--  143 (248)
                      |+++||||+||||++++++|+++|++|++++| +....++..+.+++..  +.++.++.+|++|.    +++++++++  
T Consensus        12 k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   89 (276)
T 1mxh_A           12 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAAR--AGSAVLCKGDLSLSSSLLDCCEDIIDCSF   89 (276)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHS--TTCEEEEECCCSSSTTHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhc--CCceEEEeccCCCccccHHHHHHHHHHHH
Confidence            89999999999999999999999999999997 4322222222222211  34688999999999    888888765  


Q ss_pred             ---CCCCEEEEcccccccCCCCCCc---------------hhhHhhhHHHHHHHHHHHHH---cCC------CEEEEecc
Q 025786          144 ---NAFDAVMHFAAVAYVGESTLDP---------------LKYYHNITSNTLVVLESMAR---HGV------DTLIYSST  196 (248)
Q Consensus       144 ---~~iD~li~~Ag~~~~~~~~~~~---------------~~~~~~~~~~~~~ll~~~~~---~~~------~~iV~~SS  196 (248)
                         +++|+||||||+.......+.+               +..++.|+.++..+++.+.+   ++.      ++||++||
T Consensus        90 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~g~iv~isS  169 (276)
T 1mxh_A           90 RAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCD  169 (276)
T ss_dssp             HHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECC
T ss_pred             HhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHhcCCCCCCCCcEEEEECc
Confidence               5899999999986543322222               23456666676666665554   344      79999999


Q ss_pred             ceecCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHhhcC---CCcEEEEecC
Q 025786          197 CATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNS---DMAVLQCHRF  248 (248)
Q Consensus       197 ~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e~l~~~~~~~~---gi~~~~v~Pf  248 (248)
                      ..++.           +.++...|+.||++.+.+++.++.++   |+++++|+|.
T Consensus       170 ~~~~~-----------~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG  213 (276)
T 1mxh_A          170 AMTDL-----------PLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPG  213 (276)
T ss_dssp             GGGGS-----------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEES
T ss_pred             hhhcC-----------CCCCCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecC
Confidence            88763           34457789999999999999999884   8999999993

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=99.94  E-value=9.4e-26  Score=190.46  Aligned_cols=164  Identities=15%  Similarity=0.063  Sum_probs=124.7

Q ss_pred             ceEEEEecCCc--hhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc----
Q 025786           70 VTHVLVTGGAG--YIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----  143 (248)
Q Consensus        70 ~k~vlITGasg--~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~----  143 (248)
                      +|++|||||+|  |||++++++|+++|++|++++|+.+..+...+..++.    +.+.++++|++|.+++++++++    
T Consensus        30 ~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~Dv~d~~~v~~~~~~~~~~  105 (296)
T 3k31_A           30 GKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESL----GVKLTVPCDVSDAESVDNMFKVLAEE  105 (296)
T ss_dssp             TCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHH----TCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhc----CCeEEEEcCCCCHHHHHHHHHHHHHH
Confidence            39999999997  9999999999999999999998643322233322222    3468899999999999998876    


Q ss_pred             -CCCCEEEEccccccc----CCCCCC----chhhHhhhHHHHHHHHHHHHHc--CCCEEEEeccceecCCCCCCCCCCCC
Q 025786          144 -NAFDAVMHFAAVAYV----GESTLD----PLKYYHNITSNTLVVLESMARH--GVDTLIYSSTCATYGEPEKMPITEET  212 (248)
Q Consensus       144 -~~iD~li~~Ag~~~~----~~~~~~----~~~~~~~~~~~~~~ll~~~~~~--~~~~iV~~SS~~~~g~~~~~~~~e~~  212 (248)
                       +++|+||||||+...    ....+.    .+..++.|+.++..+...+...  ..++||++||.+.+.           
T Consensus       106 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~~~~-----------  174 (296)
T 3k31_A          106 WGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYYGAEK-----------  174 (296)
T ss_dssp             HSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTS-----------
T ss_pred             cCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehhhcc-----------
Confidence             689999999998643    222222    2334556666666666666542  246999999987762           


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          213 PQAPINPYGKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       213 ~~~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                      +.++...|++||++.+.+++.++.+   +||++++|+|-
T Consensus       175 ~~~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG  213 (296)
T 3k31_A          175 VVPHYNVMGVCKAALEASVKYLAVDLGKQQIRVNAISAG  213 (296)
T ss_dssp             CCTTTTHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEC
T ss_pred             CCCCchhhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEEC
Confidence            3445789999999999999999988   48999999983

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=99.94  E-value=6.5e-26  Score=194.02  Aligned_cols=166  Identities=19%  Similarity=0.152  Sum_probs=127.0

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhc---CCCCceEEEEccCCCHHHHHHHhhc---C
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELF---PEPGRLQFIYADLGDAKAVNKFFSE---N  144 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~~~Dl~~~~~~~~~~~~---~  144 (248)
                      |+|+||||+||||++++++|+++|++|++++|..++.+...+.++...   ..+.++.++.+|++|.+++++++++   +
T Consensus         3 k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~g   82 (327)
T 1jtv_A            3 TVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTEG   82 (327)
T ss_dssp             EEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTTS
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHhcC
Confidence            899999999999999999999999999988876555444333333221   1235788999999999999999876   5


Q ss_pred             CCCEEEEcccccccCCCCCCc----hhhHhhhHHHHHH----HHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCC
Q 025786          145 AFDAVMHFAAVAYVGESTLDP----LKYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (248)
Q Consensus       145 ~iD~li~~Ag~~~~~~~~~~~----~~~~~~~~~~~~~----ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~  216 (248)
                      ++|+||||||+....+..+.+    +..++.|+.++.+    +++.|++++.++||++||.+.+.           +.+.
T Consensus        83 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~IV~isS~~~~~-----------~~~~  151 (327)
T 1jtv_A           83 RVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLM-----------GLPF  151 (327)
T ss_dssp             CCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTS-----------CCTT
T ss_pred             CCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCccccc-----------CCCC
Confidence            799999999976443332222    3345566666544    55667777778999999987762           2334


Q ss_pred             CChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          217 INPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      ...|+.||++++.+++.++.+   +|+++++|+|
T Consensus       152 ~~~Y~aSK~a~~~~~~~la~el~~~gI~v~~v~P  185 (327)
T 1jtv_A          152 NDVYCASKFALEGLCESLAVLLLPFGVHLSLIEC  185 (327)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE
T ss_pred             ChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEe
Confidence            678999999999999999986   6899999998

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=99.94  E-value=5e-26  Score=185.47  Aligned_cols=160  Identities=16%  Similarity=0.123  Sum_probs=123.2

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      |+|+||||+||||++++++|+++|++|++++|+..   ...+..+++    .++.++.+|++|.+++++++++     ++
T Consensus         6 k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~---~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   78 (234)
T 2ehd_A            6 GAVLITGASRGIGEATARLLHAKGYRVGLMARDEK---RLQALAAEL----EGALPLPGDVREEGDWARAVAAMEEAFGE   78 (234)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHH---HHHHHHHHS----TTCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHH---HHHHHHHHh----hhceEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            78999999999999999999999999999986432   222222222    2678899999999999888865     58


Q ss_pred             CCEEEEcccccccCCCCCCc----hhhHhhhHHHHH----HHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYVGESTLDP----LKYYHNITSNTL----VVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (248)
Q Consensus       146 iD~li~~Ag~~~~~~~~~~~----~~~~~~~~~~~~----~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (248)
                      +|+||||||........+.+    +..++.|+.++.    .+++.|++.+.++||++||..++.           +.++.
T Consensus        79 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~-----------~~~~~  147 (234)
T 2ehd_A           79 LSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKN-----------PFKGG  147 (234)
T ss_dssp             CCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCTTTTS-----------CCTTC
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEECCchhcC-----------CCCCC
Confidence            99999999976443322222    334455665543    567777777778999999987663           33456


Q ss_pred             ChHHHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          218 NPYGKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                      ..|+.||++.+.+++.++.+   .|+++++++|.
T Consensus       148 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg  181 (234)
T 2ehd_A          148 AAYNASKFGLLGLAGAAMLDLREANVRVVNVLPG  181 (234)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred             chhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeC
Confidence            78999999999999999877   58999999983

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.94  E-value=9.7e-26  Score=185.32  Aligned_cols=157  Identities=17%  Similarity=0.189  Sum_probs=119.9

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      |+++||||+||||++++++|+++|++|++++|+.   +...+..+++     .+.++.+|++|.+++++++++     ++
T Consensus         6 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~---~~~~~~~~~~-----~~~~~~~D~~~~~~~~~~~~~~~~~~g~   77 (245)
T 1uls_A            6 KAVLITGAAHGIGRATLELFAKEGARLVACDIEE---GPLREAAEAV-----GAHPVVMDVADPASVERGFAEALAHLGR   77 (245)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH---HHHHHHHHTT-----TCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH---HHHHHHHHHc-----CCEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            8999999999999999999999999999998643   2222222222     277899999999999888875     68


Q ss_pred             CCEEEEcccccccCCCCCCchh----hHhhhHHHHHH----HHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYVGESTLDPLK----YYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (248)
Q Consensus       146 iD~li~~Ag~~~~~~~~~~~~~----~~~~~~~~~~~----ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (248)
                      +|+||||||+.......+.+.+    .++.|+.++..    +++.|++++.++||++||.+.++            .++.
T Consensus        78 id~lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~------------~~~~  145 (245)
T 1uls_A           78 LDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVYLG------------NLGQ  145 (245)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGGGGC------------CTTC
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccchhcC------------CCCc
Confidence            9999999998654333333333    34556655444    45666666678999999987332            2346


Q ss_pred             ChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          218 NPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      ..|+.||++.+.+++.++.+   .|+++++|+|
T Consensus       146 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~P  178 (245)
T 1uls_A          146 ANYAASMAGVVGLTRTLALELGRWGIRVNTLAP  178 (245)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE
T ss_pred             hhHHHHHHHHHHHHHHHHHHHhHhCeEEEEEEe
Confidence            78999999999999999987   4899999998

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=99.94  E-value=5.1e-26  Score=212.78  Aligned_cols=177  Identities=40%  Similarity=0.658  Sum_probs=143.8

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~l  149 (248)
                      +|+||||||+|+||++++++|+++|++|++++|.........+.++.+.  ..++.++.+|++|.+++.+++++.++|+|
T Consensus        11 ~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~v~~v~~Dl~d~~~l~~~~~~~~~D~V   88 (699)
T 1z45_A           11 SKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLT--KHHIPFYEVDLCDRKGLEKVFKEYKIDSV   88 (699)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHH--TSCCCEEECCTTCHHHHHHHHHHSCCCEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhcc--CCceEEEEcCCCCHHHHHHHHHhCCCCEE
Confidence            3899999999999999999999999999999986544322222222221  23678899999999999999876579999


Q ss_pred             EEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCC----CCCCCCCCCCCCCChHHHHHH
Q 025786          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPE----KMPITEETPQAPINPYGKAKK  225 (248)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~----~~~~~e~~~~~~~~~Y~~sK~  225 (248)
                      |||||..........+.+.++.|+.++.+++++|++.+.++||++||.++||...    ..+++|+.+..|.+.|+.||.
T Consensus        89 ih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~iV~~SS~~vyg~~~~~~~~~~~~E~~~~~p~~~Y~~sK~  168 (699)
T 1z45_A           89 IHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKY  168 (699)
T ss_dssp             EECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCCCCSHHHHHHH
T ss_pred             EECCcccCcCccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECcHHHhCCCccccccCCccccCCCCCCChHHHHHH
Confidence            9999975432223345677889999999999999988888999999999997542    246788888888999999999


Q ss_pred             HHHHHHHHHhhc--CCCcEEEEecC
Q 025786          226 MAEDIILDFSKN--SDMAVLQCHRF  248 (248)
Q Consensus       226 a~e~l~~~~~~~--~gi~~~~v~Pf  248 (248)
                      ++|++++.++.+  .+++++++||+
T Consensus       169 ~~E~~~~~~~~~~~~g~~~~ilR~~  193 (699)
T 1z45_A          169 AIENILNDLYNSDKKSWKFAILRYF  193 (699)
T ss_dssp             HHHHHHHHHHHHSTTSCEEEEEEEC
T ss_pred             HHHHHHHHHHHhccCCCcEEEEEec
Confidence            999999999887  79999999985

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=99.94  E-value=4.7e-26  Score=191.50  Aligned_cols=166  Identities=14%  Similarity=0.129  Sum_probs=120.4

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCC-CCcchhhhhhhhhcCCCCceEEEEccCCC----HHHHHHHhhc-
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS-RGNIGAVKVLQELFPEPGRLQFIYADLGD----AKAVNKFFSE-  143 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~----~~~~~~~~~~-  143 (248)
                      +|+++||||+||||++++++|+++|++|++++|+. ...++..+.++.  ..+.++.++++|++|    .+++++++++ 
T Consensus        23 ~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~--~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~  100 (288)
T 2x9g_A           23 APAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNK--ERSNTAVVCQADLTNSNVLPASCEEIINSC  100 (288)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHH--HSTTCEEEEECCCSCSTTHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHh--hcCCceEEEEeecCCccCCHHHHHHHHHHH
Confidence            38999999999999999999999999999999754 222222222221  123578899999999    9999888875 


Q ss_pred             ----CCCCEEEEcccccccCCC-----CC-----Cchh----hHhhhHHHHHH----HHHHHHHcC------CCEEEEec
Q 025786          144 ----NAFDAVMHFAAVAYVGES-----TL-----DPLK----YYHNITSNTLV----VLESMARHG------VDTLIYSS  195 (248)
Q Consensus       144 ----~~iD~li~~Ag~~~~~~~-----~~-----~~~~----~~~~~~~~~~~----ll~~~~~~~------~~~iV~~S  195 (248)
                          +++|+||||||+......     .+     .+.+    .++.|+.++..    +++.|.+++      .++||++|
T Consensus       101 ~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iv~is  180 (288)
T 2x9g_A          101 FRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLC  180 (288)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCCEEEEEEC
T ss_pred             HHhcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCeEEEEEe
Confidence                689999999998654333     22     2233    33455555444    455555544      57999999


Q ss_pred             cceecCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHhhcC---CCcEEEEecC
Q 025786          196 TCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNS---DMAVLQCHRF  248 (248)
Q Consensus       196 S~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e~l~~~~~~~~---gi~~~~v~Pf  248 (248)
                      |.+++.           +.++...|+.||++.+.+++.++.++   |+++++|+|.
T Consensus       181 S~~~~~-----------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG  225 (288)
T 2x9g_A          181 DAMVDQ-----------PCMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPG  225 (288)
T ss_dssp             CTTTTS-----------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEES
T ss_pred             cccccC-----------CCCCCchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEec
Confidence            987762           34457789999999999999999884   8999999993

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=99.94  E-value=8.5e-26  Score=185.54  Aligned_cols=165  Identities=16%  Similarity=0.191  Sum_probs=122.9

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccC--CCHHHHHHHhhc----
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL--GDAKAVNKFFSE----  143 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl--~~~~~~~~~~~~----  143 (248)
                      +|+++||||+||||++++++|+++|++|++++|+..+.++..+.++...  ..+..++.+|+  +|.+++.+++++    
T Consensus        14 ~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~d~d~~~~~~~~~~~~~~~~~   91 (247)
T 3i1j_A           14 GRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAG--QPQPLIIALNLENATAQQYRELAARVEHE   91 (247)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--SCCCEEEECCTTTCCHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcC--CCCceEEEeccccCCHHHHHHHHHHHHHh
Confidence            3999999999999999999999999999999975444333333333321  23566777777  999999888765    


Q ss_pred             -CCCCEEEEccccccc-CCCCCCc----hhhHhhhHHHHHH----HHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCC
Q 025786          144 -NAFDAVMHFAAVAYV-GESTLDP----LKYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETP  213 (248)
Q Consensus       144 -~~iD~li~~Ag~~~~-~~~~~~~----~~~~~~~~~~~~~----ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~  213 (248)
                       +++|+||||||+... .+..+.+    +..++.|+.++..    +++.|++.+.++||++||...+.           +
T Consensus        92 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~-----------~  160 (247)
T 3i1j_A           92 FGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGRK-----------G  160 (247)
T ss_dssp             HSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECCGGGTS-----------C
T ss_pred             CCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcchhhcC-----------C
Confidence             689999999997532 2222222    3344556666544    55556666678999999987762           3


Q ss_pred             CCCCChHHHHHHHHHHHHHHHhhc----CCCcEEEEec
Q 025786          214 QAPINPYGKAKKMAEDIILDFSKN----SDMAVLQCHR  247 (248)
Q Consensus       214 ~~~~~~Y~~sK~a~e~l~~~~~~~----~gi~~~~v~P  247 (248)
                      .++...|+.||++.+.+++.++.+    .++++++++|
T Consensus       161 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~i~v~~v~P  198 (247)
T 3i1j_A          161 RANWGAYGVSKFATEGLMQTLADELEGVTAVRANSINP  198 (247)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEC
T ss_pred             CCCcchhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEec
Confidence            445779999999999999999987    4799999998

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=99.94  E-value=1.1e-25  Score=185.14  Aligned_cols=154  Identities=18%  Similarity=0.162  Sum_probs=115.1

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~  144 (248)
                      +|+++||||+||||++++++|+++|++|++++|+....+              .+..+++|++|++++++++++     +
T Consensus        15 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~--------------~~~~~~~D~~~~~~~~~~~~~~~~~~g   80 (247)
T 1uzm_A           15 SRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPK--------------GLFGVEVDVTDSDAVDRAFTAVEEHQG   80 (247)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT--------------TSEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHH--------------HhcCeeccCCCHHHHHHHHHHHHHHcC
Confidence            389999999999999999999999999999997543221              112388999999999888875     6


Q ss_pred             CCCEEEEcccccccCCCCCCc----hhhHhhhHHHHHH----HHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCC
Q 025786          145 AFDAVMHFAAVAYVGESTLDP----LKYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (248)
Q Consensus       145 ~iD~li~~Ag~~~~~~~~~~~----~~~~~~~~~~~~~----ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~  216 (248)
                      ++|+||||||+.......+.+    +..++.|+.++..    +++.|++++.++||++||..++.           +.++
T Consensus        81 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~  149 (247)
T 1uzm_A           81 PVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLW-----------GIGN  149 (247)
T ss_dssp             SCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC----------------C
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhcc-----------CCCC
Confidence            899999999986543333333    3344555555444    55666667778999999976652           2334


Q ss_pred             CChHHHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          217 INPYGKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                      ...|+.||++.+.+++.++.+   .|+++++++|.
T Consensus       150 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG  184 (247)
T 1uzm_A          150 QANYAASKAGVIGMARSIARELSKANVTANVVAPG  184 (247)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred             ChhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeC
Confidence            678999999999999999987   58999999993

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=99.94  E-value=8.4e-26  Score=187.17  Aligned_cols=162  Identities=18%  Similarity=0.152  Sum_probs=120.0

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc------C
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE------N  144 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~------~  144 (248)
                      |++|||||+||||++++++|+++|++|++++|+....+...+.++..   +.++.++++|++|.+++++++++      +
T Consensus         6 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g   82 (260)
T 2qq5_A            6 QVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSL---GGQCVPVVCDSSQESEVRSLFEQVDREQQG   82 (260)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH---SSEEEEEECCTTSHHHHHHHHHHHHHHHTT
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHc---CCceEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            89999999999999999999999999999987543322222222222   35788999999999999887754      5


Q ss_pred             CCCEEEEccc--cc-----ccCCCCCCchh----hHhhhHHH----HHHHHHHHHHcCCCEEEEeccceecCCCCCCCCC
Q 025786          145 AFDAVMHFAA--VA-----YVGESTLDPLK----YYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPIT  209 (248)
Q Consensus       145 ~iD~li~~Ag--~~-----~~~~~~~~~~~----~~~~~~~~----~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~  209 (248)
                      ++|+||||||  +.     ...+..+.+.+    .++.|+.+    +..+++.|.+++.++||++||...+.        
T Consensus        83 ~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--------  154 (260)
T 2qq5_A           83 RLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQ--------  154 (260)
T ss_dssp             CCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGTCCEEEEECCGGGTS--------
T ss_pred             CceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcCCcEEEEEcChhhcC--------
Confidence            7999999994  32     11222222222    33344444    34567777777778999999987763        


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          210 EETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       210 e~~~~~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                          ..+..+|+.||++.+.+++.++.+   +|+++++++|
T Consensus       155 ----~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~P  191 (260)
T 2qq5_A          155 ----YMFNVPYGVGKAACDKLAADCAHELRRHGVSCVSLWP  191 (260)
T ss_dssp             ----CCSSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEC
T ss_pred             ----CCCCCchHHHHHHHHHHHHHHHHHhccCCeEEEEEec
Confidence                123568999999999999999976   5899999999

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=99.94  E-value=5e-26  Score=188.00  Aligned_cols=153  Identities=17%  Similarity=0.137  Sum_probs=120.8

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~  144 (248)
                      +|+++||||+||||++++++|+++|++|++++|+....              ..+.++++|++|++++++++++     +
T Consensus        21 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~--------------~~~~~~~~Dl~d~~~v~~~~~~~~~~~g   86 (253)
T 2nm0_A           21 SRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPP--------------EGFLAVKCDITDTEQVEQAYKEIEETHG   86 (253)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCC--------------TTSEEEECCTTSHHHHHHHHHHHHHHTC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhh--------------ccceEEEecCCCHHHHHHHHHHHHHHcC
Confidence            38999999999999999999999999999998753221              1267899999999999888865     6


Q ss_pred             CCCEEEEcccccccCC----CCCCchhhHhhhHHHHHH----HHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCC
Q 025786          145 AFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (248)
Q Consensus       145 ~iD~li~~Ag~~~~~~----~~~~~~~~~~~~~~~~~~----ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~  216 (248)
                      ++|+||||||+.....    ..+..+..++.|..++..    +++.|++++.++||++||.+.+.           +.++
T Consensus        87 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~-----------~~~~  155 (253)
T 2nm0_A           87 PVEVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLL-----------GSAG  155 (253)
T ss_dssp             SCSEEEEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCCCC-----------CHHH
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECchhhCC-----------CCCC
Confidence            7999999999864433    223444556677766544    55666666778999999977652           2233


Q ss_pred             CChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          217 INPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      ...|+.||++.+.+++.++.+   .|+++++++|
T Consensus       156 ~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~P  189 (253)
T 2nm0_A          156 QANYAASKAGLVGFARSLARELGSRNITFNVVAP  189 (253)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEE
T ss_pred             cHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEe
Confidence            568999999999999999987   5799999998

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=99.94  E-value=8.7e-26  Score=187.05  Aligned_cols=164  Identities=17%  Similarity=0.115  Sum_probs=121.5

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCC-------CceEEEEccCCCHHHHHHHhhc
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEP-------GRLQFIYADLGDAKAVNKFFSE  143 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-------~~~~~~~~Dl~~~~~~~~~~~~  143 (248)
                      |+|+||||+||||++++++|+++|++|++++|+...   ..+..+++...+       .++.++.+|++|.+++++++++
T Consensus         8 k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   84 (264)
T 2pd6_A            8 ALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAA---AQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLEQ   84 (264)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHH---HHHHHHTC------------CCEEEECCTTSHHHHHHHHHH
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHH---HHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHHH
Confidence            899999999999999999999999999999975432   222222221111       4688999999999999888865


Q ss_pred             -----CCC-CEEEEcccccccCCCCC----CchhhHhhhHHHHHHHH----HHHHHcC-CCEEEEeccceecCCCCCCCC
Q 025786          144 -----NAF-DAVMHFAAVAYVGESTL----DPLKYYHNITSNTLVVL----ESMARHG-VDTLIYSSTCATYGEPEKMPI  208 (248)
Q Consensus       144 -----~~i-D~li~~Ag~~~~~~~~~----~~~~~~~~~~~~~~~ll----~~~~~~~-~~~iV~~SS~~~~g~~~~~~~  208 (248)
                           +++ |+||||||........+    ..+..++.|+.++.+++    +.|.+.+ .++||++||...+.       
T Consensus        85 ~~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~-------  157 (264)
T 2pd6_A           85 VQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKV-------  157 (264)
T ss_dssp             HHHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHH-------
T ss_pred             HHHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhcc-------
Confidence                 567 99999999865433222    23344566666665544    4455555 57999999976652       


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          209 TEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       209 ~e~~~~~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                          +.++...|+.||++++.+++.++.+   .|+++++++|.
T Consensus       158 ----~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg  196 (264)
T 2pd6_A          158 ----GNVGQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPG  196 (264)
T ss_dssp             ----CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred             ----CCCCChhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeee
Confidence                2344678999999999999999988   79999999994

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=99.94  E-value=1.9e-25  Score=182.97  Aligned_cols=160  Identities=17%  Similarity=0.161  Sum_probs=121.9

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-CCCCEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-NAFDAV  149 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-~~iD~l  149 (248)
                      |+++||||+||||++++++|+++|++|++++|+..   ...+..++.    ..+.++.+|++|.+++++++++ +++|+|
T Consensus         8 ~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~---~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~id~v   80 (244)
T 1cyd_A            8 LRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNS---DLVSLAKEC----PGIEPVCVDLGDWDATEKALGGIGPVDLL   80 (244)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHH---HHHHHHHHS----TTCEEEECCTTCHHHHHHHHTTCCCCSEE
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHH---HHHHHHHhc----cCCCcEEecCCCHHHHHHHHHHcCCCCEE
Confidence            89999999999999999999999999999986432   222222222    2466779999999999999975 579999


Q ss_pred             EEcccccccCCCCCC----chhhHhhhHHHHHH----HHHHHHHcC-CCEEEEeccceecCCCCCCCCCCCCCCCCCChH
Q 025786          150 MHFAAVAYVGESTLD----PLKYYHNITSNTLV----VLESMARHG-VDTLIYSSTCATYGEPEKMPITEETPQAPINPY  220 (248)
Q Consensus       150 i~~Ag~~~~~~~~~~----~~~~~~~~~~~~~~----ll~~~~~~~-~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y  220 (248)
                      |||||........+.    .+..++.|+.++.+    +++.|.+++ .++||++||..++.           +.++...|
T Consensus        81 i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~-----------~~~~~~~Y  149 (244)
T 1cyd_A           81 VNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHV-----------TFPNLITY  149 (244)
T ss_dssp             EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTS-----------CCTTBHHH
T ss_pred             EECCcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcC-----------CCCCcchh
Confidence            999997654332222    23345566666555    445555555 67999999988774           23446789


Q ss_pred             HHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          221 GKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       221 ~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                      +.||++.+.+++.++.+   .|+++++++|.
T Consensus       150 ~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg  180 (244)
T 1cyd_A          150 SSTKGAMTMLTKAMAMELGPHKIRVNSVNPT  180 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEecC
Confidence            99999999999999988   58999999994

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=99.94  E-value=2e-25  Score=182.84  Aligned_cols=160  Identities=18%  Similarity=0.162  Sum_probs=121.8

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-CCCCEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-NAFDAV  149 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-~~iD~l  149 (248)
                      |+|+||||+||||++++++|+++|++|++++|+..   ...+..+++    ....++.+|++|.+++++++++ +++|+|
T Consensus         8 k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~---~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~id~v   80 (244)
T 3d3w_A            8 RRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQA---DLDSLVREC----PGIEPVCVDLGDWEATERALGSVGPVDLL   80 (244)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHH---HHHHHHHHS----TTCEEEECCTTCHHHHHHHHTTCCCCCEE
T ss_pred             cEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHH---HHHHHHHHc----CCCCEEEEeCCCHHHHHHHHHHcCCCCEE
Confidence            89999999999999999999999999999986432   222222222    1456779999999999999976 579999


Q ss_pred             EEcccccccCCCCCC----chhhHhhhHHHHHH----HHHHHHHcC-CCEEEEeccceecCCCCCCCCCCCCCCCCCChH
Q 025786          150 MHFAAVAYVGESTLD----PLKYYHNITSNTLV----VLESMARHG-VDTLIYSSTCATYGEPEKMPITEETPQAPINPY  220 (248)
Q Consensus       150 i~~Ag~~~~~~~~~~----~~~~~~~~~~~~~~----ll~~~~~~~-~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y  220 (248)
                      |||||.....+..+.    .+..++.|+.++..    +++.|.+++ .++||++||...+.           +.++...|
T Consensus        81 i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~-----------~~~~~~~Y  149 (244)
T 3d3w_A           81 VNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQR-----------AVTNHSVY  149 (244)
T ss_dssp             EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTS-----------CCTTBHHH
T ss_pred             EECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhcc-----------CCCCCchH
Confidence            999997654332222    23445566666444    455555555 68999999987763           33456789


Q ss_pred             HHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          221 GKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       221 ~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                      +.||++++.+++.++.+   .|+++++++|.
T Consensus       150 ~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg  180 (244)
T 3d3w_A          150 CSTKGALDMLTKVMALELGPHKIRVNAVNPT  180 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred             HHHHHHHHHHHHHHHHHhcccCeEEEEEEec
Confidence            99999999999999987   58999999994

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=99.94  E-value=4e-26  Score=187.00  Aligned_cols=165  Identities=18%  Similarity=0.125  Sum_probs=123.7

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEE-ecCCCCcchhhhhhhhhcCCCCceEE-EEccCCCHHHHHHHhhc----
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIV-DNLSRGNIGAVKVLQELFPEPGRLQF-IYADLGDAKAVNKFFSE----  143 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~-~~~Dl~~~~~~~~~~~~----  143 (248)
                      ||+|+||||+||||++++++|+++|++|+++ +|+..+   ..+..+++...+.++.. +.+|++|.+++++++++    
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~---~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   77 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREK---AEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEV   77 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHH---HHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHH---HHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHh
Confidence            4899999999999999999999999999998 654322   22222222222345666 89999999999888764    


Q ss_pred             -CCCCEEEEcccccccCCCCC----CchhhHhhhHHH----HHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCC
Q 025786          144 -NAFDAVMHFAAVAYVGESTL----DPLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQ  214 (248)
Q Consensus       144 -~~iD~li~~Ag~~~~~~~~~----~~~~~~~~~~~~----~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~  214 (248)
                       +++|+||||||........+    ..+..++.|+.+    +..+++.|++.+.++||++||...+.           +.
T Consensus        78 ~~~~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~-----------~~  146 (245)
T 2ph3_A           78 LGGLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVNITSVVGIL-----------GN  146 (245)
T ss_dssp             HTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHH-----------CC
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCEEEEEeChhhcc-----------CC
Confidence             58999999999764332222    223445566666    55677888777778999999976542           22


Q ss_pred             CCCChHHHHHHHHHHHHHHHhhcC---CCcEEEEecC
Q 025786          215 APINPYGKAKKMAEDIILDFSKNS---DMAVLQCHRF  248 (248)
Q Consensus       215 ~~~~~Y~~sK~a~e~l~~~~~~~~---gi~~~~v~Pf  248 (248)
                      ++...|+.||++.+.+++.++.++   |+++++++|.
T Consensus       147 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg  183 (245)
T 2ph3_A          147 PGQANYVASKAGLIGFTRAVAKEYAQRGITVNAVAPG  183 (245)
T ss_dssp             SSBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred             CCCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEEE
Confidence            346789999999999999999874   8999999994

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.94  E-value=4e-26  Score=204.74  Aligned_cols=173  Identities=19%  Similarity=0.259  Sum_probs=140.8

Q ss_pred             CceEEEEecCCchhHHHHHHHHHHC---CCEEEEEecCCCCcchhhhhhhhhcCC-------------CCceEEEEccCC
Q 025786           69 GVTHVLVTGGAGYIGSHAALRLLKD---SYRVTIVDNLSRGNIGAVKVLQELFPE-------------PGRLQFIYADLG  132 (248)
Q Consensus        69 ~~k~vlITGasg~IG~~la~~L~~~---G~~V~~~~r~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~Dl~  132 (248)
                      .+|+||||||+|+||++++++|+++   |++|++++|+........+ +.+....             ..++.++.+|++
T Consensus        72 ~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~~-l~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~  150 (478)
T 4dqv_A           72 ELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRR-LEKTFDSGDPELLRHFKELAADRLEVVAGDKS  150 (478)
T ss_dssp             CCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHHH-HHGGGCSSCHHHHHHHHHHHTTTEEEEECCTT
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHHH-HHHHHHhcchhhhhhhhhhccCceEEEEeECC
Confidence            3599999999999999999999999   9999999986543322222 2111111             257999999998


Q ss_pred             ------CHHHHHHHhhcCCCCEEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCCCC
Q 025786          133 ------DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKM  206 (248)
Q Consensus       133 ------~~~~~~~~~~~~~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~  206 (248)
                            |.+++.++++  ++|+||||||....    ....+.+..|+.++.++++++.+.+.++||++||.++|+.....
T Consensus       151 ~~~~gld~~~~~~~~~--~~D~Vih~Aa~~~~----~~~~~~~~~Nv~gt~~ll~aa~~~~~~~~V~iSS~~v~~~~~~~  224 (478)
T 4dqv_A          151 EPDLGLDQPMWRRLAE--TVDLIVDSAAMVNA----FPYHELFGPNVAGTAELIRIALTTKLKPFTYVSTADVGAAIEPS  224 (478)
T ss_dssp             SGGGGCCHHHHHHHHH--HCCEEEECCSSCSB----SSCCEEHHHHHHHHHHHHHHHTSSSCCCEEEEEEGGGGTTSCTT
T ss_pred             CcccCCCHHHHHHHHc--CCCEEEECccccCC----cCHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeehhhcCccCCC
Confidence                  7778888887  68999999997643    44567788999999999999998888899999999999877777


Q ss_pred             CCCCCCCCCCCCh-----------HHHHHHHHHHHHHHHhhcCCCcEEEEecC
Q 025786          207 PITEETPQAPINP-----------YGKAKKMAEDIILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       207 ~~~e~~~~~~~~~-----------Y~~sK~a~e~l~~~~~~~~gi~~~~v~Pf  248 (248)
                      +++|+.+..+.++           |+.||.++|.+++.++++.|++++++||.
T Consensus       225 ~~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ivRpg  277 (478)
T 4dqv_A          225 AFTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLCALPVAVFRCG  277 (478)
T ss_dssp             TCCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHHCCCEEEEEEC
T ss_pred             CcCCcccccccCcccccccccccchHHHHHHHHHHHHHHHHHhCCCeEEEECc
Confidence            7888776544433           99999999999999999889999999984

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=99.94  E-value=2.9e-25  Score=185.25  Aligned_cols=165  Identities=15%  Similarity=0.205  Sum_probs=123.5

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~  144 (248)
                      +|+++||||+||||++++++|+++|++|++++|...   ...+..+++.. ..++.++.+|++|.+++++++++     +
T Consensus        16 ~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~---~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   91 (278)
T 2bgk_A           16 DKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADD---HGQKVCNNIGS-PDVISFVHCDVTKDEDVRNLVDTTIAKHG   91 (278)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHH---HHHHHHHHHCC-TTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChh---HHHHHHHHhCC-CCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            389999999999999999999999999999986432   22222233322 23789999999999999988875     5


Q ss_pred             CCCEEEEccccccc--CCCCCC----chhhHhhhHHHHHHH----HHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCC
Q 025786          145 AFDAVMHFAAVAYV--GESTLD----PLKYYHNITSNTLVV----LESMARHGVDTLIYSSTCATYGEPEKMPITEETPQ  214 (248)
Q Consensus       145 ~iD~li~~Ag~~~~--~~~~~~----~~~~~~~~~~~~~~l----l~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~  214 (248)
                      ++|+||||||....  ....+.    .+..++.|+.++.++    ++.|.+++.++||++||..++....          
T Consensus        92 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~----------  161 (278)
T 2bgk_A           92 KLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGE----------  161 (278)
T ss_dssp             CCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCT----------
T ss_pred             CCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccccCCCC----------
Confidence            89999999997542  122222    233455666665554    4455555678999999988874211          


Q ss_pred             CCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          215 APINPYGKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       215 ~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                      .+...|+.||++.+.+++.++.+   +|+++++++|.
T Consensus       162 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg  198 (278)
T 2bgk_A          162 GVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPY  198 (278)
T ss_dssp             TSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEES
T ss_pred             CCCcchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEec
Confidence            14678999999999999999987   68999999994

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=99.94  E-value=3.5e-26  Score=193.48  Aligned_cols=176  Identities=14%  Similarity=0.053  Sum_probs=125.2

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCH-HHHHHHhhc-----
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDA-KAVNKFFSE-----  143 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~-----  143 (248)
                      +|+||||||+||||++++++|+++|++|++++|+..+.++..+.+.+.  .+.++.++.+|++|. ++++++++.     
T Consensus        12 ~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~~   89 (311)
T 3o26_A           12 RRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNS--NHENVVFHQLDVTDPIATMSSLADFIKTHF   89 (311)
T ss_dssp             CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT--TCCSEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred             CcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCCceEEEEccCCCcHHHHHHHHHHHHHhC
Confidence            389999999999999999999999999999997544333333333222  234789999999997 888777764     


Q ss_pred             CCCCEEEEcccccccC------------------------------C----CCCCchhhHhhhHHHHH----HHHHHHHH
Q 025786          144 NAFDAVMHFAAVAYVG------------------------------E----STLDPLKYYHNITSNTL----VVLESMAR  185 (248)
Q Consensus       144 ~~iD~li~~Ag~~~~~------------------------------~----~~~~~~~~~~~~~~~~~----~ll~~~~~  185 (248)
                      +++|+||||||+....                              .    ..+..+..++.|+.++.    .+++.|++
T Consensus        90 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~  169 (311)
T 3o26_A           90 GKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQL  169 (311)
T ss_dssp             SSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTT
T ss_pred             CCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhhHhhcc
Confidence            6899999999986321                              0    11112334666766644    45666666


Q ss_pred             cCCCEEEEeccceecCCCCC--------------------------------CCCCCCCCCCCCChHHHHHHHHHHHHHH
Q 025786          186 HGVDTLIYSSTCATYGEPEK--------------------------------MPITEETPQAPINPYGKAKKMAEDIILD  233 (248)
Q Consensus       186 ~~~~~iV~~SS~~~~g~~~~--------------------------------~~~~e~~~~~~~~~Y~~sK~a~e~l~~~  233 (248)
                      .+.++||++||..++.....                                ....+....++...|+.||++++.+++.
T Consensus       170 ~~~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~  249 (311)
T 3o26_A          170 SDSPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNAYTRV  249 (311)
T ss_dssp             SSSCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSSCHHHHHHHHHHHHHHHH
T ss_pred             CCCCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcccchhhHHHHHHHHHHHHH
Confidence            67789999999776532100                                0011111223457899999999999999


Q ss_pred             HhhcC-CCcEEEEec
Q 025786          234 FSKNS-DMAVLQCHR  247 (248)
Q Consensus       234 ~~~~~-gi~~~~v~P  247 (248)
                      ++.++ ++++++|+|
T Consensus       250 la~e~~~i~v~~v~P  264 (311)
T 3o26_A          250 LANKIPKFQVNCVCP  264 (311)
T ss_dssp             HHHHCTTSEEEEECC
T ss_pred             HHhhcCCceEEEecC
Confidence            99996 699999998

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=99.94  E-value=6.3e-26  Score=195.85  Aligned_cols=165  Identities=22%  Similarity=0.343  Sum_probs=137.9

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCC-CEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc---CCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDS-YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE---NAF  146 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~---~~i  146 (248)
                      |+||||||+||||++++++|+++| ++|++++|...... .    ..+.    .+. +.+|++|.+.++++++.   +++
T Consensus        47 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~-~----~~~~----~~~-~~~d~~~~~~~~~~~~~~~~~~~  116 (357)
T 2x6t_A           47 RMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK-F----VNLV----DLN-IADYMDKEDFLIQIMAGEEFGDV  116 (357)
T ss_dssp             -CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGG-G----GGTT----TSC-CSEEEEHHHHHHHHHTTCCCSSC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcch-h----hccc----Cce-EeeecCcHHHHHHHHhhcccCCC
Confidence            789999999999999999999999 99999987543211 1    1111    122 67899999999988864   369


Q ss_pred             CEEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCCChHHHHHHH
Q 025786          147 DAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKM  226 (248)
Q Consensus       147 D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a  226 (248)
                      |+||||||....  ...++++.++.|+.++.++++++.+.+. +||++||.++|+.....+++|+.+..|.+.|+.||.+
T Consensus       117 d~Vih~A~~~~~--~~~~~~~~~~~n~~~~~~ll~a~~~~~~-r~V~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~~  193 (357)
T 2x6t_A          117 EAIFHEGACSST--TEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTSDFIESREYEKPLNVFGYSKFL  193 (357)
T ss_dssp             CEEEECCSCCCT--TCCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEEGGGGCSCSSCCCSSGGGCCCSSHHHHHHHH
T ss_pred             CEEEECCcccCC--ccCCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcchHHhCCCCCCCcCCcCCCCCCChhHHHHHH
Confidence            999999997543  3445677888999999999999998887 9999999999987776788999988899999999999


Q ss_pred             HHHHHHHHhhcCCCcEEEEecC
Q 025786          227 AEDIILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       227 ~e~l~~~~~~~~gi~~~~v~Pf  248 (248)
                      +|.+++.++.++|++++++||.
T Consensus       194 ~E~~~~~~~~~~g~~~~ilRp~  215 (357)
T 2x6t_A          194 FDEYVRQILPEANSQIVGFRYF  215 (357)
T ss_dssp             HHHHHHHHGGGCSSCEEEEEEC
T ss_pred             HHHHHHHHHHHcCCCEEEEecC
Confidence            9999999999999999999985

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=99.94  E-value=1.9e-26  Score=193.22  Aligned_cols=150  Identities=21%  Similarity=0.248  Sum_probs=131.6

Q ss_pred             ce-EEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 025786           70 VT-HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (248)
Q Consensus        70 ~k-~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~  148 (248)
                      |+ +||||||+|+||++++++|+++|++|++++|                        .++|++|.+++.+++++.++|+
T Consensus         4 M~m~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r------------------------~~~D~~d~~~~~~~~~~~~~d~   59 (287)
T 3sc6_A            4 MKERVIITGANGQLGKQLQEELNPEEYDIYPFDK------------------------KLLDITNISQVQQVVQEIRPHI   59 (287)
T ss_dssp             -CEEEEEESTTSHHHHHHHHHSCTTTEEEEEECT------------------------TTSCTTCHHHHHHHHHHHCCSE
T ss_pred             ceeEEEEECCCCHHHHHHHHHHHhCCCEEEEecc------------------------cccCCCCHHHHHHHHHhcCCCE
Confidence            44 9999999999999999999999999999885                        1379999999999998656999


Q ss_pred             EEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCCChHHHHHHHHH
Q 025786          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAE  228 (248)
Q Consensus       149 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e  228 (248)
                      |||+||.........++...++.|+.++.++++++.+.+. +||++||..+|+.....+++|+.+..|.+.|+.+|.++|
T Consensus        60 vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y~~sK~~~E  138 (287)
T 3sc6_A           60 IIHCAAYTKVDQAEKERDLAYVINAIGARNVAVASQLVGA-KLVYISTDYVFQGDRPEGYDEFHNPAPINIYGASKYAGE  138 (287)
T ss_dssp             EEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGSCCCCSSCBCTTSCCCCCSHHHHHHHHHH
T ss_pred             EEECCcccChHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEchhhhcCCCCCCCCCCCCCCCCCCHHHHHHHHHH
Confidence            9999998654444457778889999999999999998876 899999999999888888999999999999999999999


Q ss_pred             HHHHHHhhcCCCcEEEEecC
Q 025786          229 DIILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       229 ~l~~~~~~~~gi~~~~v~Pf  248 (248)
                      ++++.++.    +++++||.
T Consensus       139 ~~~~~~~~----~~~ilR~~  154 (287)
T 3sc6_A          139 QFVKELHN----KYFIVRTS  154 (287)
T ss_dssp             HHHHHHCS----SEEEEEEC
T ss_pred             HHHHHhCC----CcEEEeee
Confidence            99998765    56888884

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=99.94  E-value=1.1e-25  Score=190.14  Aligned_cols=165  Identities=14%  Similarity=0.072  Sum_probs=124.0

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      |+++||||+||||++++++|+++|++|++++|+....++..+.+.+..  +.++.++.+|++|.+++++++++     ++
T Consensus        27 k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~  104 (302)
T 1w6u_A           27 KVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQT--GNKVHAIQCDVRDPDMVQNTVSELIKVAGH  104 (302)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH--SSCEEEEECCTTCHHHHHHHHHHHHHHTCS
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc--CCceEEEEeCCCCHHHHHHHHHHHHHHcCC
Confidence            899999999999999999999999999999975433222222222211  34688999999999999888875     58


Q ss_pred             CCEEEEcccccccCCCCC----CchhhHhhhHHHHHHH----HHHHH-HcCCCEEEEeccceecCCCCCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYVGESTL----DPLKYYHNITSNTLVV----LESMA-RHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (248)
Q Consensus       146 iD~li~~Ag~~~~~~~~~----~~~~~~~~~~~~~~~l----l~~~~-~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~  216 (248)
                      +|+||||||.....+..+    ..+..++.|+.++..+    ++.+. +.+.++||++||..++.           +.++
T Consensus       105 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~-----------~~~~  173 (302)
T 1w6u_A          105 PNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAET-----------GSGF  173 (302)
T ss_dssp             CSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHH-----------CCTT
T ss_pred             CCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEccccccc-----------CCCC
Confidence            999999999754433222    2334555666665554    45554 33457999999987763           2345


Q ss_pred             CChHHHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          217 INPYGKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                      ..+|+.||++.+.+++.++.+   +|+++++++|.
T Consensus       174 ~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg  208 (302)
T 1w6u_A          174 VVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPG  208 (302)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred             cchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeec
Confidence            678999999999999999988   79999999994

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=99.94  E-value=6.4e-26  Score=191.01  Aligned_cols=165  Identities=17%  Similarity=0.128  Sum_probs=123.2

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEe-cCCCCcchhhhhhhhhcCCCCceEEEEccCCCHH-------------
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVD-NLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAK-------------  135 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-------------  135 (248)
                      +|++|||||+||||++++++|+++|++|++++ |+....+...+.++.  ..+.++.++++|++|.+             
T Consensus         9 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~--~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   86 (291)
T 1e7w_A            9 VPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNA--RRPNSAITVQADLSNVATAPVSGADGSAPV   86 (291)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH--HSTTCEEEEECCCSSSCBCCCC----CCCB
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhh--hcCCeeEEEEeecCCccccccccccccccc
Confidence            38999999999999999999999999999998 754332222222221  12457899999999999             


Q ss_pred             ----HHHHHhhc-----CCCCEEEEcccccccCCCCCCc--------------hhh----HhhhHHHH----HHHHHHHH
Q 025786          136 ----AVNKFFSE-----NAFDAVMHFAAVAYVGESTLDP--------------LKY----YHNITSNT----LVVLESMA  184 (248)
Q Consensus       136 ----~~~~~~~~-----~~iD~li~~Ag~~~~~~~~~~~--------------~~~----~~~~~~~~----~~ll~~~~  184 (248)
                          ++++++++     +++|+||||||+.......+.+              .+.    ++.|+.++    ..+++.|.
T Consensus        87 ~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~  166 (291)
T 1e7w_A           87 TLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVA  166 (291)
T ss_dssp             CHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence                88888775     6899999999986544333322              333    34454443    34666676


Q ss_pred             HcC------CCEEEEeccceecCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          185 RHG------VDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       185 ~~~------~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      +++      .++||++||...+.           +.++...|+.||++.+.+++.++.+   +||++++|+|
T Consensus       167 ~~~~~~~~~~g~Iv~isS~~~~~-----------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~P  227 (291)
T 1e7w_A          167 GTPAKHRGTNYSIINMVDAMTNQ-----------PLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGP  227 (291)
T ss_dssp             TSCGGGSCSCEEEEEECCTTTTS-----------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE
T ss_pred             hcCCCCCCCCcEEEEEechhhcC-----------CCCCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEee
Confidence            665      58999999987762           3445779999999999999999987   5899999998

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=99.94  E-value=4.4e-26  Score=190.06  Aligned_cols=167  Identities=17%  Similarity=0.211  Sum_probs=122.1

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~  144 (248)
                      +|+||||||+||||++++++|+++|++|+++++  ++.+...+..+++...+.++.++.+|++|.+++++++++     +
T Consensus        26 ~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  103 (272)
T 4e3z_A           26 TPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYA--ANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQFG  103 (272)
T ss_dssp             SCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES--SCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcC--CChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence            489999999999999999999999999988743  222222232233322356789999999999999988876     5


Q ss_pred             CCCEEEEccccccc-CCCCC----CchhhHhhhHHHHHHH----HHHHHHc---CCCEEEEeccceecCCCCCCCCCCCC
Q 025786          145 AFDAVMHFAAVAYV-GESTL----DPLKYYHNITSNTLVV----LESMARH---GVDTLIYSSTCATYGEPEKMPITEET  212 (248)
Q Consensus       145 ~iD~li~~Ag~~~~-~~~~~----~~~~~~~~~~~~~~~l----l~~~~~~---~~~~iV~~SS~~~~g~~~~~~~~e~~  212 (248)
                      ++|+||||||+... ....+    ..+..++.|+.++..+    ++.|.+.   +.++||++||.+++..          
T Consensus       104 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~----------  173 (272)
T 4e3z_A          104 RLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILG----------  173 (272)
T ss_dssp             CCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHC----------
T ss_pred             CCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccC----------
Confidence            89999999998653 22222    2334455666665554    4444442   3568999999877521          


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHhhcC---CCcEEEEecC
Q 025786          213 PQAPINPYGKAKKMAEDIILDFSKNS---DMAVLQCHRF  248 (248)
Q Consensus       213 ~~~~~~~Y~~sK~a~e~l~~~~~~~~---gi~~~~v~Pf  248 (248)
                      ...+...|+.||++.+.+++.++.++   |+++++++|.
T Consensus       174 ~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG  212 (272)
T 4e3z_A          174 SATQYVDYAASKAAIDTFTIGLAREVAAEGIRVNAVRPG  212 (272)
T ss_dssp             CTTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred             CCCCcchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecC
Confidence            11235679999999999999999885   8999999983

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=99.94  E-value=1.2e-25  Score=183.94  Aligned_cols=157  Identities=21%  Similarity=0.201  Sum_probs=119.8

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      |+++||||+||||++++++|+++|++|++++|+..+   .   .+++     .+.++.+|++| +++++++++     ++
T Consensus         3 k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~---~---~~~~-----~~~~~~~D~~~-~~~~~~~~~~~~~~g~   70 (239)
T 2ekp_A            3 RKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEE---A---AQSL-----GAVPLPTDLEK-DDPKGLVKRALEALGG   70 (239)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHH---H---HHHH-----TCEEEECCTTT-SCHHHHHHHHHHHHTS
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH---H---HHhh-----CcEEEecCCch-HHHHHHHHHHHHHcCC
Confidence            899999999999999999999999999999975322   1   1222     16788999999 888777654     68


Q ss_pred             CCEEEEcccccccCCCCCCchh----hHhhhHHH----HHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYVGESTLDPLK----YYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (248)
Q Consensus       146 iD~li~~Ag~~~~~~~~~~~~~----~~~~~~~~----~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (248)
                      +|+||||||.....+..+.+.+    .++.|+.+    ++.+++.|++++.++||++||..++...         ..++.
T Consensus        71 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------~~~~~  141 (239)
T 2ekp_A           71 LHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAG---------GPVPI  141 (239)
T ss_dssp             CCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC---------TTSCC
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhccCC---------CCCCC
Confidence            9999999998654443333333    33445444    3446677777777899999998877421         12456


Q ss_pred             ChHHHHHHHHHHHHHHHhhcC---CCcEEEEecC
Q 025786          218 NPYGKAKKMAEDIILDFSKNS---DMAVLQCHRF  248 (248)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~~~~~---gi~~~~v~Pf  248 (248)
                      ..|+.||++.+.+++.++.++   |+++++++|.
T Consensus       142 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg  175 (239)
T 2ekp_A          142 PAYTTAKTALLGLTRALAKEWARLGIRVNLLCPG  175 (239)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred             ccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeC
Confidence            789999999999999999884   8999999993

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=99.94  E-value=6.6e-26  Score=186.03  Aligned_cols=165  Identities=16%  Similarity=0.096  Sum_probs=124.5

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      |+++||||+||||++++++|+++|++|++++|+..+.+...+.+.+.  .+.++.++.+|++|.+++++++++     ++
T Consensus         8 ~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   85 (248)
T 2pnf_A            8 KVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANK--YGVKAHGVEMNLLSEESINKAFEEIYNLVDG   85 (248)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH--HCCCEEEEECCTTCHHHHHHHHHHHHHHSSC
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhh--cCCceEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence            89999999999999999999999999999997543222222222211  134688999999999999988875     58


Q ss_pred             CCEEEEcccccccCCCCC----CchhhHhhhHHHH----HHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYVGESTL----DPLKYYHNITSNT----LVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (248)
Q Consensus       146 iD~li~~Ag~~~~~~~~~----~~~~~~~~~~~~~----~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (248)
                      +|+||||||........+    ..+..++.|+.++    ..+++.|.+++.++||++||...+.           +.++.
T Consensus        86 ~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~-----------~~~~~  154 (248)
T 2pnf_A           86 IDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFT-----------GNVGQ  154 (248)
T ss_dssp             CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCEEEEEECCHHHHH-----------CCTTC
T ss_pred             CCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhcC-----------CCCCC
Confidence            999999999765433222    2334556676666    4466677777778999999976542           22346


Q ss_pred             ChHHHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          218 NPYGKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                      ..|+.||++.+.+++.++.+   .|+++++++|.
T Consensus       155 ~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg  188 (248)
T 2pnf_A          155 VNYSTTKAGLIGFTKSLAKELAPRNVLVNAVAPG  188 (248)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred             chHHHHHHHHHHHHHHHHHHhcccCeEEEEEEec
Confidence            78999999999999999887   48999999983

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=99.94  E-value=8e-26  Score=185.17  Aligned_cols=164  Identities=15%  Similarity=0.092  Sum_probs=122.3

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEE-ecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIV-DNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~  144 (248)
                      |+++||||+||||++++++|+++|++|+++ +|+....+...+.++..   +.++.++.+|++|.+++++++++     +
T Consensus         2 k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   78 (244)
T 1edo_A            2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAY---GGQAITFGGDVSKEADVEAMMKTAIDAWG   78 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHH---TCEEEEEECCTTSHHHHHHHHHHHHHHSS
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc---CCcEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            789999999999999999999999999985 55332222222222222   34788899999999999988875     5


Q ss_pred             CCCEEEEcccccccCCCCC----CchhhHhhhHHHHHH----HHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCC
Q 025786          145 AFDAVMHFAAVAYVGESTL----DPLKYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (248)
Q Consensus       145 ~iD~li~~Ag~~~~~~~~~----~~~~~~~~~~~~~~~----ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~  216 (248)
                      ++|+||||||........+    ..+..++.|+.++.+    +++.|.+++.++||++||...+.           +.++
T Consensus        79 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~-----------~~~~  147 (244)
T 1edo_A           79 TIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLI-----------GNIG  147 (244)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHH-----------CCTT
T ss_pred             CCCEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhcC-----------CCCC
Confidence            8999999999865433222    223345666666554    45555556778999999986652           2234


Q ss_pred             CChHHHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          217 INPYGKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                      ...|+.||++.+.+++.++.+   .|+++++++|.
T Consensus       148 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg  182 (244)
T 1edo_A          148 QANYAAAKAGVIGFSKTAAREGASRNINVNVVCPG  182 (244)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEC
T ss_pred             CccchhhHHHHHHHHHHHHHHhhhcCCEEEEEeeC
Confidence            678999999999999999987   58999999994

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=99.94  E-value=1.3e-25  Score=186.03  Aligned_cols=166  Identities=16%  Similarity=0.109  Sum_probs=125.1

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~  144 (248)
                      +|++|||||+||||++++++|+++|++|+++++.  ..+...+..+++...+.++.++.+|++|.+++++++++     +
T Consensus         8 ~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   85 (259)
T 3edm_A            8 NRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNG--AAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADKFG   85 (259)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECS--SCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCC--CHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            3999999999999999999999999999998542  22233333333433456789999999999999988875     6


Q ss_pred             CCCEEEEccccc-ccCCCCCCch----hhHhhhHHHHHHHHHHHHHc--CCCEEEEeccceecCCCCCCCCCCCCCCCCC
Q 025786          145 AFDAVMHFAAVA-YVGESTLDPL----KYYHNITSNTLVVLESMARH--GVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (248)
Q Consensus       145 ~iD~li~~Ag~~-~~~~~~~~~~----~~~~~~~~~~~~ll~~~~~~--~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (248)
                      ++|+||||||.. ......+.+.    ..++.|+.++..+...+...  ..++||++||...+.          .+.++.
T Consensus        86 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~----------~~~~~~  155 (259)
T 3edm_A           86 EIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQAGRD----------GGGPGA  155 (259)
T ss_dssp             SEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHH----------CCSTTC
T ss_pred             CCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcCHHhcc----------CCCCCc
Confidence            899999999976 3333333333    34556677777777766543  246999999987761          123446


Q ss_pred             ChHHHHHHHHHHHHHHHhhcCC--CcEEEEec
Q 025786          218 NPYGKAKKMAEDIILDFSKNSD--MAVLQCHR  247 (248)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~~~~~g--i~~~~v~P  247 (248)
                      ..|+.||++.+.+++.++.+++  +++++++|
T Consensus       156 ~~Y~asKaa~~~l~~~la~e~~~~I~vn~v~P  187 (259)
T 3edm_A          156 LAYATSKGAVMTFTRGLAKEVGPKIRVNAVCP  187 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEE
T ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEE
Confidence            7899999999999999998854  99999998

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=99.94  E-value=8e-26  Score=186.46  Aligned_cols=165  Identities=15%  Similarity=0.142  Sum_probs=122.3

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecC-CCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNL-SRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~  144 (248)
                      |+++||||+||||++++++|+++|++|++++|+ ....+...+.++.   .+.++.++.+|++|.+++++++++     +
T Consensus         8 k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   84 (258)
T 3afn_B            8 KRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRA---DGGDAAFFAADLATSEACQQLVDEFVAKFG   84 (258)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHH---TTCEEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHh---cCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            899999999999999999999999999999986 3333222222222   245788999999999999988875     5


Q ss_pred             CCCEEEEcccc-cccCCCCCCc----hhhHhhhHHHHHH----HHHHHHHcC--C---CEEEEeccceecCCCCCCCCCC
Q 025786          145 AFDAVMHFAAV-AYVGESTLDP----LKYYHNITSNTLV----VLESMARHG--V---DTLIYSSTCATYGEPEKMPITE  210 (248)
Q Consensus       145 ~iD~li~~Ag~-~~~~~~~~~~----~~~~~~~~~~~~~----ll~~~~~~~--~---~~iV~~SS~~~~g~~~~~~~~e  210 (248)
                      ++|+||||||. .......+.+    +..++.|+.++..    +++.|.+.+  .   ++||++||...+..        
T Consensus        85 ~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~--------  156 (258)
T 3afn_B           85 GIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTG--------  156 (258)
T ss_dssp             SCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHC--------
T ss_pred             CCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccC--------
Confidence            89999999997 4332222222    2344556666554    445555433  2   79999999877631        


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHhhcC---CCcEEEEecC
Q 025786          211 ETPQAPINPYGKAKKMAEDIILDFSKNS---DMAVLQCHRF  248 (248)
Q Consensus       211 ~~~~~~~~~Y~~sK~a~e~l~~~~~~~~---gi~~~~v~Pf  248 (248)
                        +.++..+|+.||++.+.+++.++.++   |+++++++|.
T Consensus       157 --~~~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg  195 (258)
T 3afn_B          157 --GGPGAGLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPG  195 (258)
T ss_dssp             --CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred             --CCCCchHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCC
Confidence              23457789999999999999998874   8999999994

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=99.94  E-value=2.4e-26  Score=194.33  Aligned_cols=159  Identities=19%  Similarity=0.188  Sum_probs=132.8

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~l  149 (248)
                      ||+||||||||+||++++++|+++|+      +  ....            ...+.++.+|++|.+++.++++..++|+|
T Consensus         6 ~~~vlVtGatG~iG~~l~~~L~~~g~------~--~~~~------------~~~~~~~~~D~~d~~~~~~~~~~~~~d~V   65 (319)
T 4b8w_A            6 SMRILVTGGSGLVGKAIQKVVADGAG------L--PGED------------WVFVSSKDADLTDTAQTRALFEKVQPTHV   65 (319)
T ss_dssp             CCEEEEETCSSHHHHHHHHHHHTTTC------C--TTCE------------EEECCTTTCCTTSHHHHHHHHHHSCCSEE
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhcCC------c--cccc------------ccccCceecccCCHHHHHHHHhhcCCCEE
Confidence            58999999999999999999999998      1  0000            01234457899999999999987679999


Q ss_pred             EEccccccc-CCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCC----CCCCCC-hHHHH
Q 025786          150 MHFAAVAYV-GESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEET----PQAPIN-PYGKA  223 (248)
Q Consensus       150 i~~Ag~~~~-~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~----~~~~~~-~Y~~s  223 (248)
                      ||+|+.... .....++.+.++.|+.++.++++++++.+.++||++||.++||.....+++|+.    +..|.. +|+.|
T Consensus        66 ih~A~~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~s  145 (319)
T 4b8w_A           66 IHLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVGARKVVSCLSTCIFPDKTTYPIDETMIHNGPPHNSNFGYSYA  145 (319)
T ss_dssp             EECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGSCSSCCSSBCGGGGGBSCCCSSSHHHHHH
T ss_pred             EECceecccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEcchhhcCCCCCCCccccccccCCCCCCcchHHHH
Confidence            999997531 123456677889999999999999999988899999999999988878888886    555555 69999


Q ss_pred             HHHHHHHHHHHhhcCCCcEEEEecC
Q 025786          224 KKMAEDIILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       224 K~a~e~l~~~~~~~~gi~~~~v~Pf  248 (248)
                      |.++|.+++.++++++++++++||+
T Consensus       146 K~~~E~~~~~~~~~~~~~~~ilRp~  170 (319)
T 4b8w_A          146 KRMIDVQNRAYFQQYGCTFTAVIPT  170 (319)
T ss_dssp             HHHHHHHHHHHHHHHCCEEEEEEEC
T ss_pred             HHHHHHHHHHHHHhhCCCEEEEeec
Confidence            9999999999999999999999995

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=99.94  E-value=1.1e-25  Score=186.94  Aligned_cols=167  Identities=14%  Similarity=0.080  Sum_probs=125.6

Q ss_pred             ceEEEEecCC--chhHHHHHHHHHHCCCEEEEEecCCCCc-chhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc---
Q 025786           70 VTHVLVTGGA--GYIGSHAALRLLKDSYRVTIVDNLSRGN-IGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE---  143 (248)
Q Consensus        70 ~k~vlITGas--g~IG~~la~~L~~~G~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~---  143 (248)
                      +|+++||||+  +|||++++++|+++|++|++++|+.... ++..+.+.+..  +.++.++++|++|.+++++++++   
T Consensus        20 ~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~   97 (267)
T 3gdg_A           20 GKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTY--GIKAKAYKCQVDSYESCEKLVKDVVA   97 (267)
T ss_dssp             TCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHH--CCCEECCBCCTTCHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhc--CCceeEEecCCCCHHHHHHHHHHHHH
Confidence            3999999999  9999999999999999999998754432 22222222211  45788999999999999988876   


Q ss_pred             --CCCCEEEEcccccccCCCCCCchh----hHhhhHHHHH----HHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCC
Q 025786          144 --NAFDAVMHFAAVAYVGESTLDPLK----YYHNITSNTL----VVLESMARHGVDTLIYSSTCATYGEPEKMPITEETP  213 (248)
Q Consensus       144 --~~iD~li~~Ag~~~~~~~~~~~~~----~~~~~~~~~~----~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~  213 (248)
                        +++|+||||||+.......+.+.+    .++.|+.++.    .+++.|++.+.++||++||...+...         .
T Consensus        98 ~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~---------~  168 (267)
T 3gdg_A           98 DFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIAN---------F  168 (267)
T ss_dssp             HTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCC---------S
T ss_pred             HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCceEEEEccccccccC---------C
Confidence              689999999998765443333333    3445555543    46666777777899999997765211         1


Q ss_pred             CCCCChHHHHHHHHHHHHHHHhhcCC--CcEEEEec
Q 025786          214 QAPINPYGKAKKMAEDIILDFSKNSD--MAVLQCHR  247 (248)
Q Consensus       214 ~~~~~~Y~~sK~a~e~l~~~~~~~~g--i~~~~v~P  247 (248)
                      .++...|+.||++.+.+++.++.+++  +++++++|
T Consensus       169 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~i~v~~v~P  204 (267)
T 3gdg_A          169 PQEQTSYNVAKAGCIHMARSLANEWRDFARVNSISP  204 (267)
T ss_dssp             SSCCHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEEE
T ss_pred             CCCCCcchHHHHHHHHHHHHHHHHhccCcEEEEEEC
Confidence            13467899999999999999999865  88999988

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=99.94  E-value=1.3e-25  Score=186.04  Aligned_cols=161  Identities=19%  Similarity=0.228  Sum_probs=122.7

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~  144 (248)
                      +|+++||||+||||++++++|+++|++|++++|+....   .+..+++   +.++.++.+|++|.+++++++++     +
T Consensus        12 ~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~---~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   85 (265)
T 2o23_A           12 GLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGG---EAQAKKL---GNNCVFAPADVTSEKDVQTALALAKGKFG   85 (265)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSH---HHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhH---HHHHHHh---CCceEEEEcCCCCHHHHHHHHHHHHHHCC
Confidence            38999999999999999999999999999999765433   2223333   34688999999999999988875     5


Q ss_pred             CCCEEEEcccccccCCCC----------CCchhhHhhhHHHHHHHHH----HHHHc------CCCEEEEeccceecCCCC
Q 025786          145 AFDAVMHFAAVAYVGEST----------LDPLKYYHNITSNTLVVLE----SMARH------GVDTLIYSSTCATYGEPE  204 (248)
Q Consensus       145 ~iD~li~~Ag~~~~~~~~----------~~~~~~~~~~~~~~~~ll~----~~~~~------~~~~iV~~SS~~~~g~~~  204 (248)
                      ++|+||||||........          +..+..++.|+.++..+++    .|+++      +.++||++||..++.   
T Consensus        86 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~---  162 (265)
T 2o23_A           86 RVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFE---  162 (265)
T ss_dssp             CCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHH---
T ss_pred             CCCEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChhhcC---
Confidence            899999999976433211          1223345566666555544    44444      567999999987763   


Q ss_pred             CCCCCCCCCCCCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          205 KMPITEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       205 ~~~~~e~~~~~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                              +.++...|+.||++.+.+++.++.+   .|+++++++|
T Consensus       163 --------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~P  200 (265)
T 2o23_A          163 --------GQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAP  200 (265)
T ss_dssp             --------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE
T ss_pred             --------CCCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEe
Confidence                    2344678999999999999999887   4899999998

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=99.94  E-value=1e-25  Score=189.93  Aligned_cols=165  Identities=13%  Similarity=0.037  Sum_probs=122.5

Q ss_pred             CceEEEEecCCch--hHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc---
Q 025786           69 GVTHVLVTGGAGY--IGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE---  143 (248)
Q Consensus        69 ~~k~vlITGasg~--IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~---  143 (248)
                      .+|++|||||+|+  ||++++++|+++|++|++++|+....+...+..++    .+++.++.+|++|.+++++++++   
T Consensus        30 ~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~Dv~d~~~v~~~~~~~~~  105 (293)
T 3grk_A           30 QGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEE----LGAFVAGHCDVADAASIDAVFETLEK  105 (293)
T ss_dssp             TTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHH----HTCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHh----cCCceEEECCCCCHHHHHHHHHHHHH
Confidence            3499999999965  99999999999999999998753222222222222    23688999999999999988875   


Q ss_pred             --CCCCEEEEcccccc----cCCCCCCc----hhhHhhhHHHHHHHHHHHHHc--CCCEEEEeccceecCCCCCCCCCCC
Q 025786          144 --NAFDAVMHFAAVAY----VGESTLDP----LKYYHNITSNTLVVLESMARH--GVDTLIYSSTCATYGEPEKMPITEE  211 (248)
Q Consensus       144 --~~iD~li~~Ag~~~----~~~~~~~~----~~~~~~~~~~~~~ll~~~~~~--~~~~iV~~SS~~~~g~~~~~~~~e~  211 (248)
                        +++|+||||||+..    .....+.+    +..++.|+.++..+...+...  ..++||++||.+.+.          
T Consensus       106 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~----------  175 (293)
T 3grk_A          106 KWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGAEK----------  175 (293)
T ss_dssp             HTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGGTS----------
T ss_pred             hcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhhcc----------
Confidence              68999999999864    22222222    334456666666665555432  246999999987763          


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          212 TPQAPINPYGKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       212 ~~~~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                       +.+....|+.||++.+.+++.++.+   +||++++|+|.
T Consensus       176 -~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG  214 (293)
T 3grk_A          176 -VMPNYNVMGVAKAALEASVKYLAVDLGPQNIRVNAISAG  214 (293)
T ss_dssp             -BCTTTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred             -CCCchHHHHHHHHHHHHHHHHHHHHHhHhCCEEEEEecC
Confidence             3445789999999999999999988   58999999983

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=99.94  E-value=1.5e-25  Score=188.20  Aligned_cols=164  Identities=12%  Similarity=0.027  Sum_probs=122.7

Q ss_pred             ceEEEEecCC--chhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc----
Q 025786           70 VTHVLVTGGA--GYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----  143 (248)
Q Consensus        70 ~k~vlITGas--g~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~----  143 (248)
                      +|+++||||+  ||||++++++|+++|++|++++|+.. .++..+.+.+.   .+.+.++.+|++|.+++++++++    
T Consensus        21 ~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~   96 (285)
T 2p91_A           21 GKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPK-LEKRVREIAKG---FGSDLVVKCDVSLDEDIKNLKKFLEEN   96 (285)
T ss_dssp             TCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGG-GHHHHHHHHHH---TTCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHHHh---cCCeEEEEcCCCCHHHHHHHHHHHHHH
Confidence            3899999999  99999999999999999999997542 11122222221   12367899999999999888875    


Q ss_pred             -CCCCEEEEccccccc----CCCCC----CchhhHhhhHHHHHHHHHHHHHc---CCCEEEEeccceecCCCCCCCCCCC
Q 025786          144 -NAFDAVMHFAAVAYV----GESTL----DPLKYYHNITSNTLVVLESMARH---GVDTLIYSSTCATYGEPEKMPITEE  211 (248)
Q Consensus       144 -~~iD~li~~Ag~~~~----~~~~~----~~~~~~~~~~~~~~~ll~~~~~~---~~~~iV~~SS~~~~g~~~~~~~~e~  211 (248)
                       +++|+||||||+...    .+..+    ..+..++.|+.++..++..+...   +.++||++||.+.+.          
T Consensus        97 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~----------  166 (285)
T 2p91_A           97 WGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGRNGAIVTLSYYGAEK----------  166 (285)
T ss_dssp             TSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTSCCEEEEEECGGGTS----------
T ss_pred             cCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCEEEEEccchhcc----------
Confidence             589999999997643    22212    22345566777777766665443   247999999977652          


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          212 TPQAPINPYGKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       212 ~~~~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                       +.++...|+.||++++.+++.++.+   .|+++++|+|.
T Consensus       167 -~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG  205 (285)
T 2p91_A          167 -VVPHYNVMGIAKAALESTVRYLAYDIAKHGHRINAISAG  205 (285)
T ss_dssp             -BCTTTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEEC
T ss_pred             -CCCCccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeC
Confidence             3345678999999999999999987   48999999994

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=99.94  E-value=3.6e-25  Score=185.53  Aligned_cols=159  Identities=13%  Similarity=0.161  Sum_probs=120.6

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      |++|||||++|||++++++|+++|++|++++|+.   +.+.+..++.   +.++.++.+|++|.+++++++++     ++
T Consensus         6 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~---~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   79 (281)
T 3zv4_A            6 EVALITGGASGLGRALVDRFVAEGARVAVLDKSA---ERLRELEVAH---GGNAVGVVGDVRSLQDQKRAAERCLAAFGK   79 (281)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCH---HHHHHHHHHT---BTTEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCH---HHHHHHHHHc---CCcEEEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence            9999999999999999999999999999998643   2333333332   35789999999999999888875     68


Q ss_pred             CCEEEEcccccccCCC-----CCCc----hhhHhhhHHHHH----HHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYVGES-----TLDP----LKYYHNITSNTL----VVLESMARHGVDTLIYSSTCATYGEPEKMPITEET  212 (248)
Q Consensus       146 iD~li~~Ag~~~~~~~-----~~~~----~~~~~~~~~~~~----~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~  212 (248)
                      +|+||||||+......     .+..    +..++.|+.++.    .+++.|.+.+ ++||++||...+.           
T Consensus        80 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~-----------  147 (281)
T 3zv4_A           80 IDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSR-GSVVFTISNAGFY-----------  147 (281)
T ss_dssp             CCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTS-----------
T ss_pred             CCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CeEEEEecchhcc-----------
Confidence            9999999998543211     1222    223445555544    4566666654 7999999987762           


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHhhcCC--CcEEEEec
Q 025786          213 PQAPINPYGKAKKMAEDIILDFSKNSD--MAVLQCHR  247 (248)
Q Consensus       213 ~~~~~~~Y~~sK~a~e~l~~~~~~~~g--i~~~~v~P  247 (248)
                      +.++...|+.||++.+.+++.++.+++  +++++|+|
T Consensus       148 ~~~~~~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~P  184 (281)
T 3zv4_A          148 PNGGGPLYTATKHAVVGLVRQMAFELAPHVRVNGVAP  184 (281)
T ss_dssp             SSSSCHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEE
T ss_pred             CCCCCchhHHHHHHHHHHHHHHHHHhcCCCEEEEEEC
Confidence            344567899999999999999998843  99999998

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=99.94  E-value=9.1e-26  Score=187.64  Aligned_cols=164  Identities=14%  Similarity=0.038  Sum_probs=124.2

Q ss_pred             ceEEEEecCC--chhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc----
Q 025786           70 VTHVLVTGGA--GYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----  143 (248)
Q Consensus        70 ~k~vlITGas--g~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~----  143 (248)
                      .|+||||||+  ||||++++++|+++|++|++++|+.+..+...+..++    .+++.++.+|++|.+++++++++    
T Consensus        14 ~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~~~~   89 (271)
T 3ek2_A           14 GKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAE----FGSELVFPCDVADDAQIDALFASLKTH   89 (271)
T ss_dssp             TCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHH----TTCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHH----cCCcEEEECCCCCHHHHHHHHHHHHHH
Confidence            3999999998  9999999999999999999999764332222222222    23578899999999999988875    


Q ss_pred             -CCCCEEEEccccccc----CCCCC-Cc----hhhHhhhHHHHHHHHHHHHHc--CCCEEEEeccceecCCCCCCCCCCC
Q 025786          144 -NAFDAVMHFAAVAYV----GESTL-DP----LKYYHNITSNTLVVLESMARH--GVDTLIYSSTCATYGEPEKMPITEE  211 (248)
Q Consensus       144 -~~iD~li~~Ag~~~~----~~~~~-~~----~~~~~~~~~~~~~ll~~~~~~--~~~~iV~~SS~~~~g~~~~~~~~e~  211 (248)
                       +++|+||||||+...    ....+ .+    ...++.|+.++..+...+...  ..++||++||.+.+.          
T Consensus        90 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~----------  159 (271)
T 3ek2_A           90 WDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAER----------  159 (271)
T ss_dssp             CSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEECGGGTS----------
T ss_pred             cCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEecccccc----------
Confidence             589999999998653    22222 22    334456666666776666543  246899999987762          


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          212 TPQAPINPYGKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       212 ~~~~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                       +.++...|+.||++.+.+++.++.+   .|+++++++|-
T Consensus       160 -~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG  198 (271)
T 3ek2_A          160 -AIPNYNTMGLAKAALEASVRYLAVSLGAKGVRVNAISAG  198 (271)
T ss_dssp             -BCTTTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEEC
T ss_pred             -CCCCccchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecC
Confidence             3455789999999999999999987   58999999983

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=99.93  E-value=1.4e-25  Score=185.86  Aligned_cols=172  Identities=12%  Similarity=0.100  Sum_probs=124.4

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      |+++||||+||||++++++|+++|++|++++|+..+.....+.+.+..  +.++.++.+|++|.+++++++++     ++
T Consensus        15 k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   92 (265)
T 1h5q_A           15 KTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEF--GVKTKAYQCDVSNTDIVTKTIQQIDADLGP   92 (265)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHH--TCCEEEEECCTTCHHHHHHHHHHHHHHSCS
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhc--CCeeEEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence            899999999999999999999999999999975443322222222111  34688999999999999888875     57


Q ss_pred             CCEEEEcccccccCCCCCC----chhhHhhhHHHHHHH----HHHHHHcC-CCEEEEeccceecCCCCCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYVGESTLD----PLKYYHNITSNTLVV----LESMARHG-VDTLIYSSTCATYGEPEKMPITEETPQAP  216 (248)
Q Consensus       146 iD~li~~Ag~~~~~~~~~~----~~~~~~~~~~~~~~l----l~~~~~~~-~~~iV~~SS~~~~g~~~~~~~~e~~~~~~  216 (248)
                      +|+||||||.....+..+.    .+..++.|+.++.++    ++.+.+++ .++||++||..++.....    ...+..+
T Consensus        93 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~----~~~~~~~  168 (265)
T 1h5q_A           93 ISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQS----SLNGSLT  168 (265)
T ss_dssp             EEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEE----ETTEECS
T ss_pred             CCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhccccc----ccccccc
Confidence            9999999998654332222    233455666665554    44455544 479999999876532110    0122345


Q ss_pred             CChHHHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          217 INPYGKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                      ...|+.||++.+.+++.++.+   .|+++++++|.
T Consensus       169 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg  203 (265)
T 1h5q_A          169 QVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPG  203 (265)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred             ccccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecC
Confidence            778999999999999999987   48999999993

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=99.93  E-value=3.4e-25  Score=184.19  Aligned_cols=159  Identities=23%  Similarity=0.215  Sum_probs=122.4

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCC--CCceEEEEccCCCHHHHHHHhhc-----
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPE--PGRLQFIYADLGDAKAVNKFFSE-----  143 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~-----  143 (248)
                      |+++||||+||||++++++|+++|++|++++|+...   ..+..+++...  +.++.++.+|++|++++++++++     
T Consensus         8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~---~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   84 (267)
T 2gdz_A            8 KVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEA---GVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF   84 (267)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHH---HHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHH---HHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHc
Confidence            899999999999999999999999999999875332   22222222211  34688999999999999988875     


Q ss_pred             CCCCEEEEcccccccCCCCCCchhhHhhhHHH----HHHHHHHHHHcC---CCEEEEeccceecCCCCCCCCCCCCCCCC
Q 025786          144 NAFDAVMHFAAVAYVGESTLDPLKYYHNITSN----TLVVLESMARHG---VDTLIYSSTCATYGEPEKMPITEETPQAP  216 (248)
Q Consensus       144 ~~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~----~~~ll~~~~~~~---~~~iV~~SS~~~~g~~~~~~~~e~~~~~~  216 (248)
                      +++|+||||||...    .+..+..++.|+.+    ++.+++.|++.+   .++||++||..++.           +.++
T Consensus        85 g~id~lv~~Ag~~~----~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~  149 (267)
T 2gdz_A           85 GRLDILVNNAGVNN----EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLM-----------PVAQ  149 (267)
T ss_dssp             SCCCEEEECCCCCC----SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTS-----------CCTT
T ss_pred             CCCCEEEECCCCCC----hhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccC-----------CCCC
Confidence            68999999999753    23455666777664    556788886653   57999999988763           2344


Q ss_pred             CChHHHHHHHHHHHHHHHh--hc---CCCcEEEEec
Q 025786          217 INPYGKAKKMAEDIILDFS--KN---SDMAVLQCHR  247 (248)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~~--~~---~gi~~~~v~P  247 (248)
                      ...|+.||++.+.+++.++  .+   .|+++++|+|
T Consensus       150 ~~~Y~~sK~a~~~~~~~~ala~e~~~~gi~v~~v~P  185 (267)
T 2gdz_A          150 QPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICP  185 (267)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEE
T ss_pred             CchHHHHHHHHHHHHHHHHHHHHhccCCcEEEEEec
Confidence            6789999999999999853  33   6899999999

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=99.93  E-value=1.7e-25  Score=192.08  Aligned_cols=168  Identities=29%  Similarity=0.483  Sum_probs=133.6

Q ss_pred             CceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 025786           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (248)
Q Consensus        69 ~~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~  148 (248)
                      .+|+||||||+|+||++++++|+++|++|++++|........   +..+. ...++.++.+|+.+..     +  .++|+
T Consensus        26 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---~~~~~-~~~~~~~~~~D~~~~~-----~--~~~d~   94 (343)
T 2b69_A           26 DRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRN---VEHWI-GHENFELINHDVVEPL-----Y--IEVDQ   94 (343)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGG---TGGGT-TCTTEEEEECCTTSCC-----C--CCCSE
T ss_pred             CCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhh---hhhhc-cCCceEEEeCccCChh-----h--cCCCE
Confidence            458999999999999999999999999999999754332211   11111 1346889999998752     2  36899


Q ss_pred             EEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCC-----CCCCCCChHHHH
Q 025786          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEE-----TPQAPINPYGKA  223 (248)
Q Consensus       149 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~-----~~~~~~~~Y~~s  223 (248)
                      ||||||.........++...++.|+.++.++++++.+.+. +||++||.++||.....+++|+     .+..+.+.|+.|
T Consensus        95 vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~s  173 (343)
T 2b69_A           95 IYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA-RLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEG  173 (343)
T ss_dssp             EEECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTC-EEEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTTHHHHHH
T ss_pred             EEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCC-cEEEECcHHHhCCCCCCCCcccccccCCCCCCCCchHHH
Confidence            9999997543223345667788999999999999998875 9999999999987766677776     456677889999


Q ss_pred             HHHHHHHHHHHhhcCCCcEEEEecC
Q 025786          224 KKMAEDIILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       224 K~a~e~l~~~~~~~~gi~~~~v~Pf  248 (248)
                      |.++|.+++.++.+++++++++||+
T Consensus       174 K~~~E~~~~~~~~~~~~~~~ilrp~  198 (343)
T 2b69_A          174 KRVAETMCYAYMKQEGVEVRVARIF  198 (343)
T ss_dssp             HHHHHHHHHHHHHHHCCCEEEEEEC
T ss_pred             HHHHHHHHHHHHHHhCCcEEEEEEc
Confidence            9999999999998899999999995

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=99.93  E-value=2.9e-25  Score=185.73  Aligned_cols=168  Identities=17%  Similarity=0.152  Sum_probs=126.8

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~  144 (248)
                      +|++|||||+||||++++++|+++|++|++++|+..+.+...+.++.. ....++.++.+|++|.+++++++++     +
T Consensus        32 ~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  110 (279)
T 1xg5_A           32 DRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSA-GYPGTLIPYRCDLSNEEDILSMFSAIRSQHS  110 (279)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TCSSEEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhc-CCCceEEEEEecCCCHHHHHHHHHHHHHhCC
Confidence            389999999999999999999999999999997543322222222221 1124688899999999999888875     5


Q ss_pred             CCCEEEEcccccccCCCCCCc----hhhHhhhHHH----HHHHHHHHHHcCC--CEEEEeccceecCCCCCCCCCCCCCC
Q 025786          145 AFDAVMHFAAVAYVGESTLDP----LKYYHNITSN----TLVVLESMARHGV--DTLIYSSTCATYGEPEKMPITEETPQ  214 (248)
Q Consensus       145 ~iD~li~~Ag~~~~~~~~~~~----~~~~~~~~~~----~~~ll~~~~~~~~--~~iV~~SS~~~~g~~~~~~~~e~~~~  214 (248)
                      ++|+||||||........+.+    +..++.|+.+    +..+++.|++.+.  ++||++||..++..         .+.
T Consensus       111 ~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~---------~~~  181 (279)
T 1xg5_A          111 GVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRV---------LPL  181 (279)
T ss_dssp             CCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSC---------CSC
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhccc---------CCC
Confidence            899999999986544333322    3345566666    6678888888764  79999999877631         133


Q ss_pred             CCCChHHHHHHHHHHHHHHHhhc-----CCCcEEEEec
Q 025786          215 APINPYGKAKKMAEDIILDFSKN-----SDMAVLQCHR  247 (248)
Q Consensus       215 ~~~~~Y~~sK~a~e~l~~~~~~~-----~gi~~~~v~P  247 (248)
                      ++...|+.||++.+.+++.++.+     .++++++|+|
T Consensus       182 ~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~P  219 (279)
T 1xg5_A          182 SVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISP  219 (279)
T ss_dssp             GGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEE
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEec
Confidence            44678999999999999998875     4799999998

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=99.93  E-value=1.5e-25  Score=189.39  Aligned_cols=164  Identities=23%  Similarity=0.346  Sum_probs=136.9

Q ss_pred             EEEEecCCchhHHHHHHHHHHCC-CEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc---CCCC
Q 025786           72 HVLVTGGAGYIGSHAALRLLKDS-YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE---NAFD  147 (248)
Q Consensus        72 ~vlITGasg~IG~~la~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~---~~iD  147 (248)
                      +||||||+|+||++++++|+++| ++|++++|......  ...+.       .+. +.+|++|.+.+.++++.   .++|
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~~-------~~~-~~~d~~~~~~~~~~~~~~~~~~~d   70 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--FVNLV-------DLN-IADYMDKEDFLIQIMAGEEFGDVE   70 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGG--GHHHH-------TSC-CSEEEEHHHHHHHHHTTCCCSSCC
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCch--hhhcC-------cce-eccccccHHHHHHHHhccccCCCc
Confidence            48999999999999999999999 99999987543211  11111       122 67899999999888863   2599


Q ss_pred             EEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCCChHHHHHHHH
Q 025786          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMA  227 (248)
Q Consensus       148 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~  227 (248)
                      +||||||....  ...++++.++.|+.++.++++++.+.+. +||++||.++||.....+++|+.+..|.++|+.||.++
T Consensus        71 ~vi~~a~~~~~--~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~~~  147 (310)
T 1eq2_A           71 AIFHEGACSST--TEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFLF  147 (310)
T ss_dssp             EEEECCSCCCT--TCCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEEGGGGTTCCSCBCSSGGGCCCSSHHHHHHHHH
T ss_pred             EEEECcccccC--cccCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEeeHHHhCCCCCCCCCCCCCCCCCChhHHHHHHH
Confidence            99999997543  3446677888999999999999999888 99999999999877766889998888999999999999


Q ss_pred             HHHHHHHhhcCCCcEEEEecC
Q 025786          228 EDIILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       228 e~l~~~~~~~~gi~~~~v~Pf  248 (248)
                      |.+++.++.++|++++++||.
T Consensus       148 e~~~~~~~~~~g~~~~~lrp~  168 (310)
T 1eq2_A          148 DEYVRQILPEANSQIVGFRYF  168 (310)
T ss_dssp             HHHHHHHGGGCSSCEEEEEEC
T ss_pred             HHHHHHHHHHcCCCEEEEeCC
Confidence            999999999999999999985

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=99.93  E-value=2.4e-25  Score=183.67  Aligned_cols=160  Identities=12%  Similarity=0.146  Sum_probs=123.1

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCE-EEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCH-HHHHHHhhc-----
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYR-VTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDA-KAVNKFFSE-----  143 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~-----  143 (248)
                      |+++||||+||||++++++|+++|++ |++++|+...  +..+.+.+... +.++.++.+|++|. +++++++++     
T Consensus         6 k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~--~~~~~l~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   82 (254)
T 1sby_A            6 KNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENP--TALAELKAINP-KVNITFHTYDVTVPVAESKKLLKKIFDQL   82 (254)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCH--HHHHHHHHHCT-TSEEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred             cEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchH--HHHHHHHHhCC-CceEEEEEEecCCChHHHHHHHHHHHHhc
Confidence            89999999999999999999999996 8888875421  22222333221 34788999999998 888887764     


Q ss_pred             CCCCEEEEcccccccCCCCCCchhhHhhhHHHHHHHHHH----HHHcC---CCEEEEeccceecCCCCCCCCCCCCCCCC
Q 025786          144 NAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLES----MARHG---VDTLIYSSTCATYGEPEKMPITEETPQAP  216 (248)
Q Consensus       144 ~~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~----~~~~~---~~~iV~~SS~~~~g~~~~~~~~e~~~~~~  216 (248)
                      +++|+||||||+..    .+..+..++.|+.++.++.+.    |.+++   .++||++||.+++.           +.++
T Consensus        83 g~id~lv~~Ag~~~----~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~  147 (254)
T 1sby_A           83 KTVDILINGAGILD----DHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFN-----------AIHQ  147 (254)
T ss_dssp             SCCCEEEECCCCCC----TTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTS-----------CCTT
T ss_pred             CCCCEEEECCccCC----HHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhcc-----------CCCC
Confidence            58999999999742    345567778888776665444    43432   46899999988763           3344


Q ss_pred             CChHHHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          217 INPYGKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                      ...|+.||++.+.+++.++.+   .|+++++++|-
T Consensus       148 ~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg  182 (254)
T 1sby_A          148 VPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPG  182 (254)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEEC
T ss_pred             chHHHHHHHHHHHHHHHHHHHhccCCeEEEEEecC
Confidence            678999999999999999987   68999999993

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=99.93  E-value=1.3e-25  Score=190.83  Aligned_cols=173  Identities=21%  Similarity=0.294  Sum_probs=125.6

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEec-CCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDN-LSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~l  149 (248)
                      |+||||||+||||++++++|+++|++|+++.| ......... .+..+.....++.++.+|++|.+++.++++  ++|+|
T Consensus         2 k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~v   78 (322)
T 2p4h_X            2 GRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVS-FLTNLPGASEKLHFFNADLSNPDSFAAAIE--GCVGI   78 (322)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCCH-HHHTSTTHHHHEEECCCCTTCGGGGHHHHT--TCSEE
T ss_pred             CEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHH-HHHhhhccCCceEEEecCCCCHHHHHHHHc--CCCEE
Confidence            78999999999999999999999999999886 432111111 111111001257788999999999999987  68999


Q ss_pred             EEcccccccCCCCCC-chhhHhhhHHHHHHHHHHHHHc-CCCEEEEeccceec-CCCC-CCCCCCCCCC--------CCC
Q 025786          150 MHFAAVAYVGESTLD-PLKYYHNITSNTLVVLESMARH-GVDTLIYSSTCATY-GEPE-KMPITEETPQ--------API  217 (248)
Q Consensus       150 i~~Ag~~~~~~~~~~-~~~~~~~~~~~~~~ll~~~~~~-~~~~iV~~SS~~~~-g~~~-~~~~~e~~~~--------~~~  217 (248)
                      ||||+..  .....+ ..+.++.|+.++.++++++.+. +.++||++||.+++ +... ..+++|+.+.        .|.
T Consensus        79 ih~A~~~--~~~~~~~~~~~~~~nv~gt~~l~~aa~~~~~~~~iV~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~p~  156 (322)
T 2p4h_X           79 FHTASPI--DFAVSEPEEIVTKRTVDGALGILKACVNSKTVKRFIYTSSGSAVSFNGKDKDVLDESDWSDVDLLRSVKPF  156 (322)
T ss_dssp             EECCCCC----------CHHHHHHHHHHHHHHHHHTTCSSCCEEEEEEEGGGTSCSSSCCSEECTTCCCCHHHHHHHCCT
T ss_pred             EEcCCcc--cCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccHHHcccCCCCCeecCCccccchhhhcccCcc
Confidence            9999743  111222 2347889999999999999887 67899999998754 3221 2345565432        222


Q ss_pred             C-hHHHHHHHHHHHHHHHhhcCCCcEEEEecC
Q 025786          218 N-PYGKAKKMAEDIILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       218 ~-~Y~~sK~a~e~l~~~~~~~~gi~~~~v~Pf  248 (248)
                      . +|+.||.++|.+++.+++++|++++++||+
T Consensus       157 ~~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrp~  188 (322)
T 2p4h_X          157 GWNYAVSKTLAEKAVLEFGEQNGIDVVTLILP  188 (322)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred             cccHHHHHHHHHHHHHHHHHhcCCcEEEEcCC
Confidence            3 699999999999999998899999999995

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=99.93  E-value=3.6e-26  Score=189.06  Aligned_cols=157  Identities=21%  Similarity=0.239  Sum_probs=118.6

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc----CCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----NAF  146 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~----~~i  146 (248)
                      |++|||||++|||++++++|+++|++|++++|.   .++   ..+++   ..++.++++|++|.++++++++.    +++
T Consensus        10 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~---~~~---~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~g~i   80 (257)
T 3tl3_A           10 AVAVVTGGASGLGLATTKRLLDAGAQVVVLDIR---GED---VVADL---GDRARFAAADVTDEAAVASALDLAETMGTL   80 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESS---CHH---HHHHT---CTTEEEEECCTTCHHHHHHHHHHHHHHSCE
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCc---hHH---HHHhc---CCceEEEECCCCCHHHHHHHHHHHHHhCCC
Confidence            899999999999999999999999999999862   222   12222   35789999999999999888864    589


Q ss_pred             CEEEEcccccccC--------CCCCCchhhHhhhHHHHHH----HHHHHHH--------cCCCEEEEeccceecCCCCCC
Q 025786          147 DAVMHFAAVAYVG--------ESTLDPLKYYHNITSNTLV----VLESMAR--------HGVDTLIYSSTCATYGEPEKM  206 (248)
Q Consensus       147 D~li~~Ag~~~~~--------~~~~~~~~~~~~~~~~~~~----ll~~~~~--------~~~~~iV~~SS~~~~g~~~~~  206 (248)
                      |+||||||+....        ...+..+..++.|+.++..    +++.|.+        .+.++||++||...+.     
T Consensus        81 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----  155 (257)
T 3tl3_A           81 RIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFD-----  155 (257)
T ss_dssp             EEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--C-----
T ss_pred             CEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcC-----
Confidence            9999999975321        1112233445566666544    4555555        3456999999987762     


Q ss_pred             CCCCCCCCCCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          207 PITEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       207 ~~~e~~~~~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                            +.++...|+.||++.+.+++.++.+   .|+++++|+|
T Consensus       156 ------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~P  193 (257)
T 3tl3_A          156 ------GQIGQAAYSASKGGVVGMTLPIARDLASHRIRVMTIAP  193 (257)
T ss_dssp             ------CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE
T ss_pred             ------CCCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEe
Confidence                  2334668999999999999999988   5899999998

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=99.93  E-value=2.5e-25  Score=186.36  Aligned_cols=161  Identities=14%  Similarity=0.075  Sum_probs=120.6

Q ss_pred             ceEEEEecCC--chhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc----
Q 025786           70 VTHVLVTGGA--GYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----  143 (248)
Q Consensus        70 ~k~vlITGas--g~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~----  143 (248)
                      +|+++||||+  +|||++++++|+++|++|++++|..  .++..+.+.+   ...++.++.+|++|.+++++++++    
T Consensus        26 ~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~--~~~~~~~l~~---~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  100 (280)
T 3nrc_A           26 GKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ--FKDRVEKLCA---EFNPAAVLPCDVISDQEIKDLFVELGKV  100 (280)
T ss_dssp             TCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT--CHHHHHHHHG---GGCCSEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch--HHHHHHHHHH---hcCCceEEEeecCCHHHHHHHHHHHHHH
Confidence            4999999998  6699999999999999999999754  2222222222   223588999999999999998876    


Q ss_pred             -CCCCEEEEcccccccC----C-----CCCCchhhHhhhHHHHHHHHHH----HHHcCCCEEEEeccceecCCCCCCCCC
Q 025786          144 -NAFDAVMHFAAVAYVG----E-----STLDPLKYYHNITSNTLVVLES----MARHGVDTLIYSSTCATYGEPEKMPIT  209 (248)
Q Consensus       144 -~~iD~li~~Ag~~~~~----~-----~~~~~~~~~~~~~~~~~~ll~~----~~~~~~~~iV~~SS~~~~g~~~~~~~~  209 (248)
                       +++|+||||||+....    .     ..+..+..++.|+.++..++..    |.+. .++||++||.+.+.        
T Consensus       101 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~g~iv~isS~~~~~--------  171 (280)
T 3nrc_A          101 WDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNR-NASMVALTYIGAEK--------  171 (280)
T ss_dssp             CSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT-TCEEEEEECGGGTS--------
T ss_pred             cCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-CCeEEEEecccccc--------
Confidence             6899999999986431    1     1112233455666665554444    4333 57999999987762        


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          210 EETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       210 e~~~~~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                         +.++...|+.||++.+.+++.++.+   .|+++++++|
T Consensus       172 ---~~~~~~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~P  209 (280)
T 3nrc_A          172 ---AMPSYNTMGVAKASLEATVRYTALALGEDGIKVNAVSA  209 (280)
T ss_dssp             ---CCTTTHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEE
T ss_pred             ---CCCCchhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEee
Confidence               3455779999999999999999987   6899999998

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=99.93  E-value=1.4e-25  Score=191.94  Aligned_cols=165  Identities=16%  Similarity=0.115  Sum_probs=123.2

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEe-cCCCCcchhhhhhhhhcCCCCceEEEEccCCCHH--------------
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVD-NLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAK--------------  135 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~--------------  135 (248)
                      |++|||||+||||++++++|+++|++|++++ |+....++..+.+..  ..+.++.++++|++|.+              
T Consensus        47 k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~--~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~  124 (328)
T 2qhx_A           47 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNA--RRPNSAITVQADLSNVATAPVSGADGSAPVT  124 (328)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH--HSTTCEEEEECCCSSSCBCC-------CCBC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHh--hcCCeEEEEEeeCCCchhccccccccccccc
Confidence            8999999999999999999999999999998 654332222222221  12357889999999998              


Q ss_pred             ---HHHHHhhc-----CCCCEEEEcccccccCCCCCCc--------------hh----hHhhhHHHH----HHHHHHHHH
Q 025786          136 ---AVNKFFSE-----NAFDAVMHFAAVAYVGESTLDP--------------LK----YYHNITSNT----LVVLESMAR  185 (248)
Q Consensus       136 ---~~~~~~~~-----~~iD~li~~Ag~~~~~~~~~~~--------------~~----~~~~~~~~~----~~ll~~~~~  185 (248)
                         ++++++++     +++|+||||||+.......+.+              .+    .++.|+.++    ..+++.|.+
T Consensus       125 ~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~  204 (328)
T 2qhx_A          125 LFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAG  204 (328)
T ss_dssp             HHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence               88888765     6899999999986543332222              22    344555554    345666666


Q ss_pred             cC------CCEEEEeccceecCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHhhcC---CCcEEEEecC
Q 025786          186 HG------VDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNS---DMAVLQCHRF  248 (248)
Q Consensus       186 ~~------~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e~l~~~~~~~~---gi~~~~v~Pf  248 (248)
                      .+      .++||++||..++.           +.++...|+.||++++.+++.++.++   ||++++|+|.
T Consensus       205 ~~~~~~~~~g~IV~isS~~~~~-----------~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG  265 (328)
T 2qhx_A          205 TPAKHRGTNYSIINMVDAMTNQ-----------PLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPG  265 (328)
T ss_dssp             SCGGGSCSCEEEEEECCTTTTS-----------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEES
T ss_pred             cCCcCCCCCcEEEEECchhhcc-----------CCCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecC
Confidence            65      67999999987652           34457799999999999999999884   8999999993

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=99.93  E-value=9.6e-26  Score=191.32  Aligned_cols=155  Identities=23%  Similarity=0.259  Sum_probs=106.3

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li  150 (248)
                      |+||||||||+||++++++|+++|++|++++|+...              + +  ++.+|++|.+++.++++..++|+||
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~--------------~-~--~~~~Dl~d~~~~~~~~~~~~~d~vi   65 (315)
T 2ydy_A            3 RRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR--------------P-K--FEQVNLLDSNAVHHIIHDFQPHVIV   65 (315)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEC-----------------------------------CHHHHHHHCCSEEE
T ss_pred             CeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC--------------C-C--eEEecCCCHHHHHHHHHhhCCCEEE
Confidence            789999999999999999999999999999864211              1 2  6789999999999888754689999


Q ss_pred             EcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCCChHHHHHHHHHHH
Q 025786          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDI  230 (248)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e~l  230 (248)
                      ||||.........++...++.|+.++.++++++.+.+. +||++||..+|+. ...+++|+.+..|.+.|+.||.++|++
T Consensus        66 h~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~~~-~~~~~~E~~~~~~~~~Y~~sK~~~e~~  143 (315)
T 2ydy_A           66 HCAAERRPDVVENQPDAASQLNVDASGNLAKEAAAVGA-FLIYISSDYVFDG-TNPPYREEDIPAPLNLYGKTKLDGEKA  143 (315)
T ss_dssp             ECC-------------------CHHHHHHHHHHHHHTC-EEEEEEEGGGSCS-SSCSBCTTSCCCCCSHHHHHHHHHHHH
T ss_pred             ECCcccChhhhhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEchHHHcCC-CCCCCCCCCCCCCcCHHHHHHHHHHHH
Confidence            99997654333456677888999999999999998875 9999999999987 556788998888999999999999999


Q ss_pred             HHHHhhcCCCcEEEEecC
Q 025786          231 ILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       231 ~~~~~~~~gi~~~~v~Pf  248 (248)
                      ++.++    ++++++||.
T Consensus       144 ~~~~~----~~~~~lR~~  157 (315)
T 2ydy_A          144 VLENN----LGAAVLRIP  157 (315)
T ss_dssp             HHHHC----TTCEEEEEC
T ss_pred             HHHhC----CCeEEEeee
Confidence            98874    566888874

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.93  E-value=1.3e-25  Score=193.40  Aligned_cols=158  Identities=20%  Similarity=0.280  Sum_probs=129.3

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHC-CC-EEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCC
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKD-SY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFD  147 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~-G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD  147 (248)
                      +|+||||||||+||++++++|+++ |+ +|++++|...+   ..+..+.+.  ..++.++.+|++|.+++.++++  ++|
T Consensus        21 ~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~---~~~~~~~~~--~~~v~~~~~Dl~d~~~l~~~~~--~~D   93 (344)
T 2gn4_A           21 NQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELK---QSEMAMEFN--DPRMRFFIGDVRDLERLNYALE--GVD   93 (344)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHH---HHHHHHHHC--CTTEEEEECCTTCHHHHHHHTT--TCS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhh---HHHHHHHhc--CCCEEEEECCCCCHHHHHHHHh--cCC
Confidence            389999999999999999999999 98 99999874322   222222222  2478999999999999999987  799


Q ss_pred             EEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCCChHHHHHHHH
Q 025786          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMA  227 (248)
Q Consensus       148 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~  227 (248)
                      +||||||..........+.+.++.|+.++.++++++.+.+.++||++||...+              .|.++|+.||.++
T Consensus        94 ~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~v~~~V~~SS~~~~--------------~p~~~Y~~sK~~~  159 (344)
T 2gn4_A           94 ICIHAAALKHVPIAEYNPLECIKTNIMGASNVINACLKNAISQVIALSTDKAA--------------NPINLYGATKLCS  159 (344)
T ss_dssp             EEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGS--------------SCCSHHHHHHHHH
T ss_pred             EEEECCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCCccC--------------CCccHHHHHHHHH
Confidence            99999997543223345677889999999999999999988999999996554              2467999999999


Q ss_pred             HHHHHHHhhc---CCCcEEEEecC
Q 025786          228 EDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       228 e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                      |.+++.++.+   .|++++++||.
T Consensus       160 E~~~~~~~~~~~~~g~~~~~vRpg  183 (344)
T 2gn4_A          160 DKLFVSANNFKGSSQTQFSVVRYG  183 (344)
T ss_dssp             HHHHHHGGGCCCSSCCEEEEECCC
T ss_pred             HHHHHHHHHHhCCCCcEEEEEEec
Confidence            9999999876   58999999984

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=99.93  E-value=1e-25  Score=183.80  Aligned_cols=152  Identities=18%  Similarity=0.207  Sum_probs=119.7

Q ss_pred             CCCceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCce-EEEEccCCCHHHHHHHhhcCC
Q 025786           67 EEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRL-QFIYADLGDAKAVNKFFSENA  145 (248)
Q Consensus        67 ~~~~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~Dl~~~~~~~~~~~~~~  145 (248)
                      ..+ |+|+|||||||||++++++|+++|++|++++|+..+.+   + +..     .++ .++.+|++  +++.+.+.  +
T Consensus        19 l~~-~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~---~-~~~-----~~~~~~~~~Dl~--~~~~~~~~--~   84 (236)
T 3e8x_A           19 FQG-MRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGP---E-LRE-----RGASDIVVANLE--EDFSHAFA--S   84 (236)
T ss_dssp             --C-CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHH---H-HHH-----TTCSEEEECCTT--SCCGGGGT--T
T ss_pred             cCC-CeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHH---H-HHh-----CCCceEEEcccH--HHHHHHHc--C
Confidence            344 89999999999999999999999999999997543321   1 111     257 88999999  66666665  7


Q ss_pred             CCEEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCCChHHHHHH
Q 025786          146 FDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKK  225 (248)
Q Consensus       146 iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~  225 (248)
                      +|+||||||...    .......++.|+.++.++++++++.+.++||++||.+.+..       +..+ .+...|+.+|.
T Consensus        85 ~D~vi~~ag~~~----~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~-------~~~~-~~~~~Y~~sK~  152 (236)
T 3e8x_A           85 IDAVVFAAGSGP----HTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVGTVDP-------DQGP-MNMRHYLVAKR  152 (236)
T ss_dssp             CSEEEECCCCCT----TSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCTTCSCG-------GGSC-GGGHHHHHHHH
T ss_pred             CCEEEECCCCCC----CCCccccchhhHHHHHHHHHHHHHcCCCEEEEEecCCCCCC-------CCCh-hhhhhHHHHHH
Confidence            999999999653    24567788889999999999999988899999999554421       1112 45779999999


Q ss_pred             HHHHHHHHHhhcCCCcEEEEecC
Q 025786          226 MAEDIILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       226 a~e~l~~~~~~~~gi~~~~v~Pf  248 (248)
                      ++|.+++    +.|++++++||.
T Consensus       153 ~~e~~~~----~~gi~~~~lrpg  171 (236)
T 3e8x_A          153 LADDELK----RSSLDYTIVRPG  171 (236)
T ss_dssp             HHHHHHH----HSSSEEEEEEEC
T ss_pred             HHHHHHH----HCCCCEEEEeCC
Confidence            9999886    579999999994

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.93  E-value=7.1e-25  Score=179.74  Aligned_cols=168  Identities=17%  Similarity=0.171  Sum_probs=124.8

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCC--CEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDS--YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----  143 (248)
                      |+|+||||+||||++++++|+++|  ++|++++|+....+.    +.++  ...++.++.+|++|.+++++++++     
T Consensus         4 k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~----l~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   77 (250)
T 1yo6_A            4 GSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATE----LKSI--KDSRVHVLPLTVTCDKSLDTFVSKVGEIV   77 (250)
T ss_dssp             SEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHH----HHTC--CCTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHH----HHhc--cCCceEEEEeecCCHHHHHHHHHHHHHhc
Confidence            899999999999999999999999  999999975443322    2222  245789999999999999888875     


Q ss_pred             C--CCCEEEEcccccc-cCCCCCCc----hhhHhhhHHHHHH----HHHHHHHc------C-----CCEEEEeccceecC
Q 025786          144 N--AFDAVMHFAAVAY-VGESTLDP----LKYYHNITSNTLV----VLESMARH------G-----VDTLIYSSTCATYG  201 (248)
Q Consensus       144 ~--~iD~li~~Ag~~~-~~~~~~~~----~~~~~~~~~~~~~----ll~~~~~~------~-----~~~iV~~SS~~~~g  201 (248)
                      +  ++|+||||||... .....+.+    +..++.|+.++..    +++.|.+.      +     .++||++||...+.
T Consensus        78 g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~  157 (250)
T 1yo6_A           78 GSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSI  157 (250)
T ss_dssp             GGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCS
T ss_pred             CCCCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCcccc
Confidence            3  8999999999865 33323222    3344556655554    45555555      4     68999999987763


Q ss_pred             CCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHhhcC---CCcEEEEecC
Q 025786          202 EPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNS---DMAVLQCHRF  248 (248)
Q Consensus       202 ~~~~~~~~e~~~~~~~~~Y~~sK~a~e~l~~~~~~~~---gi~~~~v~Pf  248 (248)
                      ...    .+..+..+...|+.||++.+.+++.++.++   |+++++++|.
T Consensus       158 ~~~----~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg  203 (250)
T 1yo6_A          158 TDN----TSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPG  203 (250)
T ss_dssp             TTC----CSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECC
T ss_pred             CCc----ccccccCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCC
Confidence            221    111222467789999999999999999886   8999999993

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=99.93  E-value=1e-25  Score=189.20  Aligned_cols=149  Identities=23%  Similarity=0.259  Sum_probs=128.3

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li  150 (248)
                      ++||||||||+||++++++|+++|++|++++|.                        .+|++|.+++.+++++.++|+||
T Consensus        13 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~------------------------~~Dl~d~~~~~~~~~~~~~d~vi   68 (292)
T 1vl0_A           13 MKILITGANGQLGREIQKQLKGKNVEVIPTDVQ------------------------DLDITNVLAVNKFFNEKKPNVVI   68 (292)
T ss_dssp             EEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT------------------------TCCTTCHHHHHHHHHHHCCSEEE
T ss_pred             ceEEEECCCChHHHHHHHHHHhCCCeEEeccCc------------------------cCCCCCHHHHHHHHHhcCCCEEE
Confidence            899999999999999999999999999998752                        27999999999988754689999


Q ss_pred             EcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCCChHHHHHHHHHHH
Q 025786          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDI  230 (248)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e~l  230 (248)
                      ||||.........++.+.++.|+.++.++++++.+.+. +||++||.++|+.....+++|+.+..|.+.|+.||.++|.+
T Consensus        69 h~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~-~iv~~SS~~v~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~  147 (292)
T 1vl0_A           69 NCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGA-EIVQISTDYVFDGEAKEPITEFDEVNPQSAYGKTKLEGENF  147 (292)
T ss_dssp             ECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGSCSCCSSCBCTTSCCCCCSHHHHHHHHHHHH
T ss_pred             ECCccCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEechHHeECCCCCCCCCCCCCCCCccHHHHHHHHHHHH
Confidence            99997543222345667788899999999999998876 99999999999877767899999988999999999999999


Q ss_pred             HHHHhhcCCCcEEEEecC
Q 025786          231 ILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       231 ~~~~~~~~gi~~~~v~Pf  248 (248)
                      ++.++.    +++++||.
T Consensus       148 ~~~~~~----~~~~lR~~  161 (292)
T 1vl0_A          148 VKALNP----KYYIVRTA  161 (292)
T ss_dssp             HHHHCS----SEEEEEEC
T ss_pred             HHhhCC----CeEEEeee
Confidence            998754    57888884

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=99.93  E-value=1.9e-25  Score=186.62  Aligned_cols=164  Identities=12%  Similarity=0.017  Sum_probs=123.6

Q ss_pred             ceEEEEecCC--chhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc----
Q 025786           70 VTHVLVTGGA--GYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----  143 (248)
Q Consensus        70 ~k~vlITGas--g~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~----  143 (248)
                      +|+++||||+  ||||++++++|+++|++|++++|+.. .++..+.+.+.   .+.+.++.+|++|.+++++++++    
T Consensus         6 ~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~   81 (275)
T 2pd4_A            6 GKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQE---LNSPYVYELDVSKEEHFKSLYNSVKKD   81 (275)
T ss_dssp             TCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHH---TTCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHHh---cCCcEEEEcCCCCHHHHHHHHHHHHHH
Confidence            3899999999  99999999999999999999998653 22222222221   12478899999999999988875    


Q ss_pred             -CCCCEEEEccccccc----CCCCC----CchhhHhhhHHHHHHHHHHHHHc--CCCEEEEeccceecCCCCCCCCCCCC
Q 025786          144 -NAFDAVMHFAAVAYV----GESTL----DPLKYYHNITSNTLVVLESMARH--GVDTLIYSSTCATYGEPEKMPITEET  212 (248)
Q Consensus       144 -~~iD~li~~Ag~~~~----~~~~~----~~~~~~~~~~~~~~~ll~~~~~~--~~~~iV~~SS~~~~g~~~~~~~~e~~  212 (248)
                       +++|+||||||+...    .+..+    ..+..++.|+.++..+...+...  +.++||++||.+.+.           
T Consensus        82 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~-----------  150 (275)
T 2pd4_A           82 LGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTK-----------  150 (275)
T ss_dssp             TSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTS-----------
T ss_pred             cCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEecchhcC-----------
Confidence             589999999998643    22222    23344566777777777776553  236999999977652           


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHhhcC---CCcEEEEecC
Q 025786          213 PQAPINPYGKAKKMAEDIILDFSKNS---DMAVLQCHRF  248 (248)
Q Consensus       213 ~~~~~~~Y~~sK~a~e~l~~~~~~~~---gi~~~~v~Pf  248 (248)
                      +.++...|+.||++.+.+++.++.++   |+++++++|.
T Consensus       151 ~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG  189 (275)
T 2pd4_A          151 YMAHYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAG  189 (275)
T ss_dssp             BCTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEEC
T ss_pred             CCCCchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeC
Confidence            33456789999999999999999884   8999999994

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=99.93  E-value=3.3e-25  Score=184.09  Aligned_cols=165  Identities=14%  Similarity=0.071  Sum_probs=123.6

Q ss_pred             ceEEEEecCCch--hHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc----
Q 025786           70 VTHVLVTGGAGY--IGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----  143 (248)
Q Consensus        70 ~k~vlITGasg~--IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~----  143 (248)
                      +|+++||||+|+  ||++++++|+++|++|++++|+.+..+...+..++..  ..++.++.+|++|.+++++++++    
T Consensus         7 ~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~   84 (266)
T 3oig_A            7 GRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLD--RNDSIILPCDVTNDAEIETCFASIKEQ   84 (266)
T ss_dssp             TCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSS--SCCCEEEECCCSSSHHHHHHHHHHHHH
T ss_pred             CCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcC--CCCceEEeCCCCCHHHHHHHHHHHHHH
Confidence            389999999955  9999999999999999999876433333333322221  23789999999999999988876    


Q ss_pred             -CCCCEEEEccccccc----CCCCCCc----hhhHhhhHHHHHHHHHHHHHc--CCCEEEEeccceecCCCCCCCCCCCC
Q 025786          144 -NAFDAVMHFAAVAYV----GESTLDP----LKYYHNITSNTLVVLESMARH--GVDTLIYSSTCATYGEPEKMPITEET  212 (248)
Q Consensus       144 -~~iD~li~~Ag~~~~----~~~~~~~----~~~~~~~~~~~~~ll~~~~~~--~~~~iV~~SS~~~~g~~~~~~~~e~~  212 (248)
                       +++|+||||||+...    ....+.+    +..++.|..++..++..+...  +.++||++||.+.+.           
T Consensus        85 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~-----------  153 (266)
T 3oig_A           85 VGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGGEL-----------  153 (266)
T ss_dssp             HSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTS-----------
T ss_pred             hCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEecccccc-----------
Confidence             689999999998642    2222222    234456666666666666543  246999999987762           


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          213 PQAPINPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       213 ~~~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      +.++...|+.||++.+.+++.++.+   .|+++++++|
T Consensus       154 ~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~P  191 (266)
T 3oig_A          154 VMPNYNVMGVAKASLDASVKYLAADLGKENIRVNSISA  191 (266)
T ss_dssp             CCTTTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE
T ss_pred             cCCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEec
Confidence            3445778999999999999999988   4899999998

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=99.93  E-value=5.1e-26  Score=194.81  Aligned_cols=173  Identities=22%  Similarity=0.285  Sum_probs=127.1

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~l  149 (248)
                      +|+||||||+||||++++++|+++|++|+++.|+..+..... .+..+. ...++.++.+|++|.+++.++++  ++|+|
T Consensus         9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~-~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~--~~D~V   84 (338)
T 2rh8_A            9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVS-HLLELQ-ELGDLKIFRADLTDELSFEAPIA--GCDFV   84 (338)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTH-HHHHHG-GGSCEEEEECCTTTSSSSHHHHT--TCSEE
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHH-HHHhcC-CCCcEEEEecCCCChHHHHHHHc--CCCEE
Confidence            389999999999999999999999999998887543322111 111221 12368889999999999988887  68999


Q ss_pred             EEcccccccCCCCCCc-hhhHhhhHHHHHHHHHHHHHcC-CCEEEEecccee-cCCC---CCCCCCCCCCCC--------
Q 025786          150 MHFAAVAYVGESTLDP-LKYYHNITSNTLVVLESMARHG-VDTLIYSSTCAT-YGEP---EKMPITEETPQA--------  215 (248)
Q Consensus       150 i~~Ag~~~~~~~~~~~-~~~~~~~~~~~~~ll~~~~~~~-~~~iV~~SS~~~-~g~~---~~~~~~e~~~~~--------  215 (248)
                      ||+|+....  ...++ .+.++.|+.++.++++++.+.+ .++||++||.++ |+..   ...+++|+.+..        
T Consensus        85 ih~A~~~~~--~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~  162 (338)
T 2rh8_A           85 FHVATPVHF--ASEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTSSAAAVTINQLDGTGLVVDEKNWTDIEFLTSAK  162 (338)
T ss_dssp             EEESSCCCC-----------CHHHHHHHHHHHHHHHHCTTCCEEEEECCHHHHHHHHHTCSCCCCCTTTTTCC-------
T ss_pred             EEeCCccCC--CCCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEEecHHHeecCCcCCCCcccChhhccchhhccccC
Confidence            999986422  11222 3478899999999999999875 789999999763 3321   112566665321        


Q ss_pred             C-CChHHHHHHHHHHHHHHHhhcCCCcEEEEecC
Q 025786          216 P-INPYGKAKKMAEDIILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       216 ~-~~~Y~~sK~a~e~l~~~~~~~~gi~~~~v~Pf  248 (248)
                      + ..+|+.||.++|.+++.+++++|++++++||+
T Consensus       163 ~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~  196 (338)
T 2rh8_A          163 PPTWGYPASKTLAEKAAWKFAEENNIDLITVIPT  196 (338)
T ss_dssp             CCCCCCTTSCCHHHHHHHHHHHHHTCCEEEEEEC
T ss_pred             CccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCC
Confidence            1 22699999999999999988889999999996

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=99.93  E-value=3.3e-25  Score=184.46  Aligned_cols=164  Identities=20%  Similarity=0.161  Sum_probs=124.0

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      |+|+||||+||||++++++|+++|++|++++|.  +.+...+..+++...+.++.++.+|++|.+++++++++     ++
T Consensus        22 k~vlItGasggiG~~la~~l~~~G~~v~~~~r~--~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   99 (274)
T 1ja9_A           22 KVALTTGAGRGIGRGIAIELGRRGASVVVNYGS--SSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFGG   99 (274)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESS--CHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCC--chHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            899999999999999999999999999999872  22222222222222245788999999999999888875     58


Q ss_pred             CCEEEEcccccccCCCCCC----chhhHhhhHHHHHHHHHHHHHc---CCCEEEEeccceec-CCCCCCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYVGESTLD----PLKYYHNITSNTLVVLESMARH---GVDTLIYSSTCATY-GEPEKMPITEETPQAPI  217 (248)
Q Consensus       146 iD~li~~Ag~~~~~~~~~~----~~~~~~~~~~~~~~ll~~~~~~---~~~~iV~~SS~~~~-g~~~~~~~~e~~~~~~~  217 (248)
                      +|+||||||........+.    .+..++.|..++.++++.+.+.   + ++||++||..++ .           +.++.
T Consensus       100 ~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~iv~~sS~~~~~~-----------~~~~~  167 (274)
T 1ja9_A          100 LDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG-GRIILTSSIAAVMT-----------GIPNH  167 (274)
T ss_dssp             EEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEE-EEEEEECCGGGTCC-----------SCCSC
T ss_pred             CCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC-CEEEEEcChHhccC-----------CCCCC
Confidence            9999999997644332222    2345566777777776666543   4 799999998776 3           12346


Q ss_pred             ChHHHHHHHHHHHHHHHhhcC---CCcEEEEecC
Q 025786          218 NPYGKAKKMAEDIILDFSKNS---DMAVLQCHRF  248 (248)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~~~~~---gi~~~~v~Pf  248 (248)
                      ..|+.||++.+.+++.++.++   |+++++++|.
T Consensus       168 ~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg  201 (274)
T 1ja9_A          168 ALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPG  201 (274)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEEC
T ss_pred             chHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeC
Confidence            789999999999999999884   8999999983

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=99.93  E-value=1.2e-25  Score=186.46  Aligned_cols=163  Identities=17%  Similarity=0.094  Sum_probs=123.0

Q ss_pred             eEEEEecCC--chhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----
Q 025786           71 THVLVTGGA--GYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (248)
Q Consensus        71 k~vlITGas--g~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----  143 (248)
                      |+++||||+  ||||++++++|+++|++|++++|+.. .++..+.+.+.   .+.+.++.+|++|.+++++++++     
T Consensus         9 k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~   84 (261)
T 2wyu_A            9 KKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAER-LRPEAEKLAEA---LGGALLFRADVTQDEELDALFAGVKEAF   84 (261)
T ss_dssp             CEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGG-GHHHHHHHHHH---TTCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHH-HHHHHHHHHHh---cCCcEEEECCCCCHHHHHHHHHHHHHHc
Confidence            899999999  99999999999999999999997542 11122222221   12478899999999999888875     


Q ss_pred             CCCCEEEEccccccc----CCCCC----CchhhHhhhHHHHHHHHHHHHHc--CCCEEEEeccceecCCCCCCCCCCCCC
Q 025786          144 NAFDAVMHFAAVAYV----GESTL----DPLKYYHNITSNTLVVLESMARH--GVDTLIYSSTCATYGEPEKMPITEETP  213 (248)
Q Consensus       144 ~~iD~li~~Ag~~~~----~~~~~----~~~~~~~~~~~~~~~ll~~~~~~--~~~~iV~~SS~~~~g~~~~~~~~e~~~  213 (248)
                      +++|+||||||+...    .+..+    ..+..++.|+.++..+++.+.+.  +.++||++||.+.+.           +
T Consensus        85 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~-----------~  153 (261)
T 2wyu_A           85 GGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEK-----------V  153 (261)
T ss_dssp             SSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTS-----------B
T ss_pred             CCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccCCEEEEEecccccC-----------C
Confidence            589999999997642    22222    23345567777777777777553  236999999977652           2


Q ss_pred             CCCCChHHHHHHHHHHHHHHHhhcC---CCcEEEEecC
Q 025786          214 QAPINPYGKAKKMAEDIILDFSKNS---DMAVLQCHRF  248 (248)
Q Consensus       214 ~~~~~~Y~~sK~a~e~l~~~~~~~~---gi~~~~v~Pf  248 (248)
                      .++...|+.||++.+.+++.++.++   |+++++++|.
T Consensus       154 ~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg  191 (261)
T 2wyu_A          154 VPKYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAG  191 (261)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEEC
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeC
Confidence            3446789999999999999999885   8999999994

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=99.93  E-value=1e-25  Score=189.75  Aligned_cols=152  Identities=19%  Similarity=0.209  Sum_probs=130.1

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li  150 (248)
                      |+|+||||+|+||++++++|+ +|++|++++|..                    .++.+|++|.+++.++++..++|+||
T Consensus         1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~--------------------~~~~~D~~d~~~~~~~~~~~~~d~vi   59 (299)
T 1n2s_A            1 MNILLFGKTGQVGWELQRSLA-PVGNLIALDVHS--------------------KEFCGDFSNPKGVAETVRKLRPDVIV   59 (299)
T ss_dssp             CEEEEECTTSHHHHHHHHHTT-TTSEEEEECTTC--------------------SSSCCCTTCHHHHHHHHHHHCCSEEE
T ss_pred             CeEEEECCCCHHHHHHHHHhh-cCCeEEEecccc--------------------ccccccCCCHHHHHHHHHhcCCCEEE
Confidence            479999999999999999999 899999998632                    12468999999999998754699999


Q ss_pred             EcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCCChHHHHHHHHHHH
Q 025786          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDI  230 (248)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e~l  230 (248)
                      |+||.........++++.++.|+.++.++++++++.+. +||++||..+|+.....+++|+.+..|.+.|+.||.++|++
T Consensus        60 h~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~  138 (299)
T 1n2s_A           60 NAAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGA-WVVHYSTDYVFPGTGDIPWQETDATSPLNVYGKTKLAGEKA  138 (299)
T ss_dssp             ECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTTC-EEEEEEEGGGSCCCTTCCBCTTSCCCCSSHHHHHHHHHHHH
T ss_pred             ECcccCCHhhhhcCHHHHHHHHHHHHHHHHHHHHHcCC-cEEEEecccEEeCCCCCCCCCCCCCCCccHHHHHHHHHHHH
Confidence            99997543223456677888999999999999988776 89999999999987777889999999999999999999999


Q ss_pred             HHHHhhcCCCcEEEEecC
Q 025786          231 ILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       231 ~~~~~~~~gi~~~~v~Pf  248 (248)
                      ++.++.    +++++||.
T Consensus       139 ~~~~~~----~~~ilRp~  152 (299)
T 1n2s_A          139 LQDNCP----KHLIFRTS  152 (299)
T ss_dssp             HHHHCS----SEEEEEEC
T ss_pred             HHHhCC----CeEEEeee
Confidence            998754    78999985

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=99.93  E-value=7.3e-26  Score=182.65  Aligned_cols=150  Identities=12%  Similarity=0.125  Sum_probs=123.3

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCC-HHHHHHHhhcCCCCEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD-AKAVNKFFSENAFDAV  149 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~iD~l  149 (248)
                      |+|+||||+|+||++++++|+++|++|++++|+..+.+.           ..++.++++|++| .+++.++++  ++|+|
T Consensus         1 M~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~-----------~~~~~~~~~D~~d~~~~~~~~~~--~~d~v   67 (219)
T 3dqp_A            1 MKIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQ-----------YNNVKAVHFDVDWTPEEMAKQLH--GMDAI   67 (219)
T ss_dssp             CEEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCC-----------CTTEEEEECCTTSCHHHHHTTTT--TCSEE
T ss_pred             CeEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhh-----------cCCceEEEecccCCHHHHHHHHc--CCCEE
Confidence            479999999999999999999999999999976433211           1468999999999 999999987  69999


Q ss_pred             EEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCCChHHHHHHHHHH
Q 025786          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAED  229 (248)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e~  229 (248)
                      |||||...        .+.++.|..++.++++++++.+.++||++||..+++..   +..| .+..+.+.|+.+|.++|.
T Consensus        68 i~~ag~~~--------~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~---~~~e-~~~~~~~~Y~~sK~~~e~  135 (219)
T 3dqp_A           68 INVSGSGG--------KSLLKVDLYGAVKLMQAAEKAEVKRFILLSTIFSLQPE---KWIG-AGFDALKDYYIAKHFADL  135 (219)
T ss_dssp             EECCCCTT--------SSCCCCCCHHHHHHHHHHHHTTCCEEEEECCTTTTCGG---GCCS-HHHHHTHHHHHHHHHHHH
T ss_pred             EECCcCCC--------CCcEeEeHHHHHHHHHHHHHhCCCEEEEECcccccCCC---cccc-cccccccHHHHHHHHHHH
Confidence            99999754        12566778889999999999888899999998776422   2333 344457899999999999


Q ss_pred             HHHHHhhcCCCcEEEEecC
Q 025786          230 IILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       230 l~~~~~~~~gi~~~~v~Pf  248 (248)
                      +++   ++.|++++++||.
T Consensus       136 ~~~---~~~~i~~~ilrp~  151 (219)
T 3dqp_A          136 YLT---KETNLDYTIIQPG  151 (219)
T ss_dssp             HHH---HSCCCEEEEEEEC
T ss_pred             HHH---hccCCcEEEEeCc
Confidence            987   5689999999994

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=99.93  E-value=9.5e-25  Score=181.94  Aligned_cols=159  Identities=21%  Similarity=0.181  Sum_probs=119.2

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      |+++||||+||||++++++|+++|++|++++|+..   ...+..+++    .++.++++|++|.+++++++++     ++
T Consensus        10 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~---~~~~~~~~~----~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   82 (270)
T 1yde_A           10 KVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDES---GGRALEQEL----PGAVFILCDVTQEDDVKTLVSETIRRFGR   82 (270)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHH---HHHHHHHHC----TTEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHH---HHHHHHHHh----cCCeEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            89999999999999999999999999999986432   222222222    2478899999999999988875     68


Q ss_pred             CCEEEEccccccc-CCCCCCc----hhhHhhhHHHHHH----HHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYV-GESTLDP----LKYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (248)
Q Consensus       146 iD~li~~Ag~~~~-~~~~~~~----~~~~~~~~~~~~~----ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~  216 (248)
                      +|+||||||.... ....+.+    +..++.|+.++..    +++.|++. .++||++||...+.           +.++
T Consensus        83 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~-----------~~~~  150 (270)
T 1yde_A           83 LDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS-QGNVINISSLVGAI-----------GQAQ  150 (270)
T ss_dssp             CCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCHHHHH-----------CCTT
T ss_pred             CCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHC-CCEEEEEcCccccC-----------CCCC
Confidence            9999999997542 2222222    3344566666555    44555444 47999999976542           2234


Q ss_pred             CChHHHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          217 INPYGKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                      ..+|+.||++.+.+++.++.+   +|+++++|+|.
T Consensus       151 ~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~Pg  185 (270)
T 1yde_A          151 AVPYVATKGAVTAMTKALALDESPYGVRVNCISPG  185 (270)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEEC
T ss_pred             CcccHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeC
Confidence            668999999999999999977   68999999994

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=99.93  E-value=3.4e-25  Score=182.69  Aligned_cols=164  Identities=19%  Similarity=0.172  Sum_probs=124.6

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-------
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-------  143 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-------  143 (248)
                      |+++||||++|||++++++|+++|++|+++++  ++.+...+..+++...+.++.++.+|++|.+++++++++       
T Consensus         8 k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   85 (255)
T 3icc_A            8 KVALVTGASRGIGRAIAKRLANDGALVAIHYG--NRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQN   85 (255)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEES--SCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHHH
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCeEEEEeC--CchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHhcc
Confidence            89999999999999999999999999998753  223333333333333356788999999999998887764       


Q ss_pred             ----CCCCEEEEcccccccCCCCCCchh----hHhhhHHHHHHHHHHHHHc--CCCEEEEeccceecCCCCCCCCCCCCC
Q 025786          144 ----NAFDAVMHFAAVAYVGESTLDPLK----YYHNITSNTLVVLESMARH--GVDTLIYSSTCATYGEPEKMPITEETP  213 (248)
Q Consensus       144 ----~~iD~li~~Ag~~~~~~~~~~~~~----~~~~~~~~~~~ll~~~~~~--~~~~iV~~SS~~~~g~~~~~~~~e~~~  213 (248)
                          +++|+||||||+.......+.+.+    .++.|+.++..++..+...  +.++||++||.+.+.           +
T Consensus        86 ~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~~~~~-----------~  154 (255)
T 3icc_A           86 RTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRI-----------S  154 (255)
T ss_dssp             HHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGTS-----------C
T ss_pred             cccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCChhhcc-----------C
Confidence                249999999998654443333333    3456666777777766543  346899999987763           3


Q ss_pred             CCCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          214 QAPINPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       214 ~~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      .+....|+.||++.+.+++.++.+   .|+++++++|
T Consensus       155 ~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~P  191 (255)
T 3icc_A          155 LPDFIAYSMTKGAINTMTFTLAKQLGARGITVNAILP  191 (255)
T ss_dssp             CTTBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEE
T ss_pred             CCCcchhHHhHHHHHHHHHHHHHHHHhcCeEEEEEEE
Confidence            445678999999999999999988   4899999998

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=99.93  E-value=7.5e-25  Score=181.80  Aligned_cols=167  Identities=14%  Similarity=0.153  Sum_probs=124.0

Q ss_pred             CceEEEEecCCchhHHHHHHHHHHCC---CEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc--
Q 025786           69 GVTHVLVTGGAGYIGSHAALRLLKDS---YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE--  143 (248)
Q Consensus        69 ~~k~vlITGasg~IG~~la~~L~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--  143 (248)
                      .+|+||||||+||||++++++|+++|   ++|++++|+....+.+.+ +..   ...++.++.+|++|.+++++++++  
T Consensus        20 ~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~~-l~~---~~~~~~~~~~Dl~~~~~v~~~~~~~~   95 (267)
T 1sny_A           20 HMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELED-LAK---NHSNIHILEIDLRNFDAYDKLVADIE   95 (267)
T ss_dssp             CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHH-HHH---HCTTEEEEECCTTCGGGHHHHHHHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHHH-hhc---cCCceEEEEecCCChHHHHHHHHHHH
Confidence            34899999999999999999999999   999999986554433222 211   134789999999999999888875  


Q ss_pred             ---C--CCCEEEEcccccc-cCCCCC----CchhhHhhhHHHHHH----HHHHHHHc------C-----CCEEEEeccce
Q 025786          144 ---N--AFDAVMHFAAVAY-VGESTL----DPLKYYHNITSNTLV----VLESMARH------G-----VDTLIYSSTCA  198 (248)
Q Consensus       144 ---~--~iD~li~~Ag~~~-~~~~~~----~~~~~~~~~~~~~~~----ll~~~~~~------~-----~~~iV~~SS~~  198 (248)
                         +  ++|+||||||+.. .....+    ..+..++.|+.++..    +++.|.+.      +     .++||++||..
T Consensus        96 ~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~  175 (267)
T 1sny_A           96 GVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSIL  175 (267)
T ss_dssp             HHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGG
T ss_pred             HhcCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEEeccc
Confidence               3  7999999999865 222222    223345566666555    44555544      3     57999999987


Q ss_pred             ecCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          199 TYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       199 ~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      ++....        +..+...|+.||++.+.+++.++.+   .|+++++++|
T Consensus       176 ~~~~~~--------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~P  219 (267)
T 1sny_A          176 GSIQGN--------TDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHP  219 (267)
T ss_dssp             GCSTTC--------CSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECC
T ss_pred             ccccCC--------CCCCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCC
Confidence            763211        1235678999999999999999988   6899999998

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=99.93  E-value=2.6e-25  Score=184.78  Aligned_cols=163  Identities=16%  Similarity=0.099  Sum_probs=123.2

Q ss_pred             eEEEEecCC--chhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----
Q 025786           71 THVLVTGGA--GYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (248)
Q Consensus        71 k~vlITGas--g~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----  143 (248)
                      |+++||||+  ||||++++++|+++|++|++++|+. ..++..+.+.+.   .+...++++|++|.+++++++++     
T Consensus        10 k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~l~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~   85 (265)
T 1qsg_A           10 KRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQ---LGSDIVLQCDVAEDASIDTMFAELGKVW   85 (265)
T ss_dssp             CEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESST-TTHHHHHHHHHH---TTCCCEEECCTTCHHHHHHHHHHHHTTC
T ss_pred             CEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHHh---cCCcEEEEccCCCHHHHHHHHHHHHHHc
Confidence            899999999  9999999999999999999999865 222222222221   12347889999999999888875     


Q ss_pred             CCCCEEEEccccccc----CC-----CCCCchhhHhhhHHHHHHHHHHHHHc--CCCEEEEeccceecCCCCCCCCCCCC
Q 025786          144 NAFDAVMHFAAVAYV----GE-----STLDPLKYYHNITSNTLVVLESMARH--GVDTLIYSSTCATYGEPEKMPITEET  212 (248)
Q Consensus       144 ~~iD~li~~Ag~~~~----~~-----~~~~~~~~~~~~~~~~~~ll~~~~~~--~~~~iV~~SS~~~~g~~~~~~~~e~~  212 (248)
                      +++|+||||||+...    .+     ..+..+..++.|+.++..+.+.+.+.  +.++||++||.+.+.           
T Consensus        86 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~-----------  154 (265)
T 1qsg_A           86 PKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAER-----------  154 (265)
T ss_dssp             SSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTS-----------
T ss_pred             CCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEcchhhcc-----------
Confidence            589999999997642    11     11223345667777777777777653  236999999977762           


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHhhcC---CCcEEEEecC
Q 025786          213 PQAPINPYGKAKKMAEDIILDFSKNS---DMAVLQCHRF  248 (248)
Q Consensus       213 ~~~~~~~Y~~sK~a~e~l~~~~~~~~---gi~~~~v~Pf  248 (248)
                      +.++...|+.||++.+.+++.++.++   |+++++++|.
T Consensus       155 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG  193 (265)
T 1qsg_A          155 AIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAG  193 (265)
T ss_dssp             BCTTTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEEC
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeC
Confidence            33456789999999999999999884   8999999994

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=99.93  E-value=1.3e-25  Score=190.85  Aligned_cols=155  Identities=18%  Similarity=0.249  Sum_probs=130.8

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li  150 (248)
                      |+||||||+|+||++++++|+++|++|++++|..                       .+|++|.+++.+++++.++|+||
T Consensus         4 ~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~-----------------------~~D~~d~~~~~~~~~~~~~d~vi   60 (321)
T 1e6u_A            4 QRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD-----------------------ELNLLDSRAVHDFFASERIDQVY   60 (321)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT-----------------------TCCTTCHHHHHHHHHHHCCSEEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc-----------------------cCCccCHHHHHHHHHhcCCCEEE
Confidence            7899999999999999999999999999876421                       27999999999998755689999


Q ss_pred             EcccccccC-CCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCC----CCCCC-ChHHHHH
Q 025786          151 HFAAVAYVG-ESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEET----PQAPI-NPYGKAK  224 (248)
Q Consensus       151 ~~Ag~~~~~-~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~----~~~~~-~~Y~~sK  224 (248)
                      |+||..... ....++.+.++.|+.++.++++++.+.+.++||++||..+||.....+++|+.    +..|. +.|+.||
T Consensus        61 h~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK  140 (321)
T 1e6u_A           61 LAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAK  140 (321)
T ss_dssp             ECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHHHHHHH
T ss_pred             EcCeecCCcchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccHHHcCCCCCCCcCccccccCCCCCCCCccHHHH
Confidence            999965311 12235567788899999999999999888899999999999877667788876    44453 5899999


Q ss_pred             HHHHHHHHHHhhcCCCcEEEEecC
Q 025786          225 KMAEDIILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       225 ~a~e~l~~~~~~~~gi~~~~v~Pf  248 (248)
                      .++|++++.++.+++++++++||+
T Consensus       141 ~~~E~~~~~~~~~~~~~~~ilrp~  164 (321)
T 1e6u_A          141 IAGIKLCESYNRQYGRDYRSVMPT  164 (321)
T ss_dssp             HHHHHHHHHHHHHHCCEEEEEEEC
T ss_pred             HHHHHHHHHHHHHhCCCEEEEEeC
Confidence            999999999998889999999995

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.93  E-value=7e-25  Score=180.65  Aligned_cols=154  Identities=18%  Similarity=0.145  Sum_probs=116.6

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-CCCCE
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-NAFDA  148 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-~~iD~  148 (248)
                      +|+++||||+||||++++++|+++|++|++++|+.       +..+++    +++.++ +|+  .+++++++++ .++|+
T Consensus        19 ~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~-------~~~~~~----~~~~~~-~D~--~~~~~~~~~~~~~iD~   84 (249)
T 1o5i_A           19 DKGVLVLAASRGIGRAVADVLSQEGAEVTICARNE-------ELLKRS----GHRYVV-CDL--RKDLDLLFEKVKEVDI   84 (249)
T ss_dssp             TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCH-------HHHHHT----CSEEEE-CCT--TTCHHHHHHHSCCCSE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCH-------HHHHhh----CCeEEE-eeH--HHHHHHHHHHhcCCCE
Confidence            39999999999999999999999999999998743       112222    256677 999  4456666655 37999


Q ss_pred             EEEcccccccCCCCCCchh----hHhhhHHH----HHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCCChH
Q 025786          149 VMHFAAVAYVGESTLDPLK----YYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPY  220 (248)
Q Consensus       149 li~~Ag~~~~~~~~~~~~~----~~~~~~~~----~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y  220 (248)
                      ||||||........+.+.+    .++.|+.+    ++.+++.|++++.++||++||..++.           +.++...|
T Consensus        85 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~~~~Y  153 (249)
T 1o5i_A           85 LVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVIS-----------PIENLYTS  153 (249)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS-----------CCTTBHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchHhcC-----------CCCCCchH
Confidence            9999997654333333333    33445444    44578888887778999999988873           33456789


Q ss_pred             HHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          221 GKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       221 ~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                      +.||++.+.+++.++.+   +|+++++++|.
T Consensus       154 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg  184 (249)
T 1o5i_A          154 NSARMALTGFLKTLSFEVAPYGITVNCVAPG  184 (249)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEeeC
Confidence            99999999999999987   58999999993

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=99.93  E-value=9.2e-26  Score=189.10  Aligned_cols=153  Identities=18%  Similarity=0.212  Sum_probs=129.0

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~l  149 (248)
                      ||+||||| +|+||++++++|+++|++|++++|+....             ..++.++.+|++|.+++.++++. ++|+|
T Consensus         3 ~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~-------------~~~~~~~~~Dl~d~~~~~~~~~~-~~d~v   67 (286)
T 3gpi_A            3 LSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPM-------------PAGVQTLIADVTRPDTLASIVHL-RPEIL   67 (286)
T ss_dssp             CCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCC-------------CTTCCEEECCTTCGGGCTTGGGG-CCSEE
T ss_pred             CCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcccc-------------ccCCceEEccCCChHHHHHhhcC-CCCEE
Confidence            37899999 59999999999999999999999754321             24688899999999999888873 59999


Q ss_pred             EEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCCChHHHHHHHHHH
Q 025786          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAED  229 (248)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e~  229 (248)
                      ||+||...     .++...++.|+.++.++++++.+.+.++||++||.++||.....+++|+.+..|.+.|+.||.++|.
T Consensus        68 ih~a~~~~-----~~~~~~~~~n~~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~  142 (286)
T 3gpi_A           68 VYCVAASE-----YSDEHYRLSYVEGLRNTLSALEGAPLQHVFFVSSTGVYGQEVEEWLDEDTPPIAKDFSGKRMLEAEA  142 (286)
T ss_dssp             EECHHHHH-----HC-----CCSHHHHHHHHHHTTTSCCCEEEEEEEGGGCCCCCSSEECTTSCCCCCSHHHHHHHHHHH
T ss_pred             EEeCCCCC-----CCHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEcccEEEcCCCCCCCCCCCCCCCCChhhHHHHHHHH
Confidence            99999642     2345667788999999999999888889999999999998888889999999999999999999999


Q ss_pred             HHHHHhhcCCCcEEEEecC
Q 025786          230 IILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       230 l~~~~~~~~gi~~~~v~Pf  248 (248)
                      + +.+     ++++++||+
T Consensus       143 ~-~~~-----~~~~ilR~~  155 (286)
T 3gpi_A          143 L-LAA-----YSSTILRFS  155 (286)
T ss_dssp             H-GGG-----SSEEEEEEC
T ss_pred             H-Hhc-----CCeEEEecc
Confidence            8 553     899999985

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=99.93  E-value=1.4e-24  Score=182.29  Aligned_cols=164  Identities=16%  Similarity=0.152  Sum_probs=120.8

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~  144 (248)
                      +|+|+||||+||||++++++|+++|++|++++|+..+.+...+.+.+..  ..++.++.+|++|.+++++++++     +
T Consensus        28 ~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g  105 (286)
T 1xu9_A           28 GKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELG--AASAHYIAGTMEDMTFAEQFVAQAGKLMG  105 (286)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHT--CSEEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhC--CCceEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            3899999999999999999999999999999975433322222222221  23688999999999999888865     5


Q ss_pred             CCCEEEEc-ccccccCCCCCCc---hhhHhhhHHHHHH----HHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCC
Q 025786          145 AFDAVMHF-AAVAYVGESTLDP---LKYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (248)
Q Consensus       145 ~iD~li~~-Ag~~~~~~~~~~~---~~~~~~~~~~~~~----ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~  216 (248)
                      ++|+|||| ||.........+.   +..++.|+.++..    +++.|.+. .++||++||.+++.           +.++
T Consensus       106 ~iD~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~-----------~~~~  173 (286)
T 1xu9_A          106 GLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS-NGSIVVVSSLAGKV-----------AYPM  173 (286)
T ss_dssp             SCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEEEGGGTS-----------CCTT
T ss_pred             CCCEEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHC-CCEEEEECCccccc-----------CCCC
Confidence            89999999 5654332222222   3345566666544    45555444 47999999987763           3345


Q ss_pred             CChHHHHHHHHHHHHHHHhhcC-----CCcEEEEec
Q 025786          217 INPYGKAKKMAEDIILDFSKNS-----DMAVLQCHR  247 (248)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~~~~~-----gi~~~~v~P  247 (248)
                      ...|+.||++.+.+++.++.++     ++++++++|
T Consensus       174 ~~~Y~asK~a~~~~~~~l~~e~~~~~~~i~v~~v~P  209 (286)
T 1xu9_A          174 VAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVL  209 (286)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEE
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeec
Confidence            7799999999999999998764     899999998

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=99.93  E-value=2.3e-25  Score=182.55  Aligned_cols=154  Identities=15%  Similarity=0.167  Sum_probs=118.8

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc------
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE------  143 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~------  143 (248)
                      +|+++||||+||||++++++|+++|++|++++|+....+             ....++.+|++|.+++++++++      
T Consensus         7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~-------------~~~~~~~~D~~~~~~v~~~~~~~~~~~~   73 (241)
T 1dhr_A            7 ARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA-------------SASVIVKMTDSFTEQADQVTAEVGKLLG   73 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS-------------SEEEECCCCSCHHHHHHHHHHHHHHHHT
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc-------------CCcEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            389999999999999999999999999999997543211             1356788999999999888875      


Q ss_pred             -CCCCEEEEcccccccCCC-CCCc----hhhHhhhHHHHHHHHHHHHHc--CCCEEEEeccceecCCCCCCCCCCCCCCC
Q 025786          144 -NAFDAVMHFAAVAYVGES-TLDP----LKYYHNITSNTLVVLESMARH--GVDTLIYSSTCATYGEPEKMPITEETPQA  215 (248)
Q Consensus       144 -~~iD~li~~Ag~~~~~~~-~~~~----~~~~~~~~~~~~~ll~~~~~~--~~~~iV~~SS~~~~g~~~~~~~~e~~~~~  215 (248)
                       +++|+||||||+....+. .+.+    +..++.|+.++..+...+.+.  ..++||++||.+++.           +.+
T Consensus        74 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~  142 (241)
T 1dhr_A           74 DQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALD-----------GTP  142 (241)
T ss_dssp             TCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGS-----------CCT
T ss_pred             CCCCCEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHHHcc-----------CCC
Confidence             489999999998654333 2333    234456666666666555442  236999999988763           334


Q ss_pred             CCChHHHHHHHHHHHHHHHhhcC-----CCcEEEEec
Q 025786          216 PINPYGKAKKMAEDIILDFSKNS-----DMAVLQCHR  247 (248)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~~~~~-----gi~~~~v~P  247 (248)
                      +...|+.||++.+.+++.++.++     |+++++++|
T Consensus       143 ~~~~Y~asK~a~~~~~~~la~e~~~~~~gi~v~~v~P  179 (241)
T 1dhr_A          143 GMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLP  179 (241)
T ss_dssp             TBHHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEE
T ss_pred             CchHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEec
Confidence            56789999999999999999875     499999998

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.93  E-value=2.5e-25  Score=184.83  Aligned_cols=159  Identities=23%  Similarity=0.233  Sum_probs=120.0

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      |+++||||+||||++++++|+++|++|++++|+.   +.+.+..+++   ..++.++.+|++|.+++++++++     ++
T Consensus         7 k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~---~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   80 (263)
T 2a4k_A            7 KTILVTGAASGIGRAALDLFAREGASLVAVDREE---RLLAEAVAAL---EAEAIAVVADVSDPKAVEAVFAEALEEFGR   80 (263)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH---HHHHHHHHTC---CSSEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH---HHHHHHHHHh---cCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            8999999999999999999999999999998643   2233333332   24688999999999999888875     68


Q ss_pred             CCEEEEcccccccCCCCCCch----hhHhhhHHHHHHHHHHHHHc--CCCEEEEeccceecCCCCCCCCCCCCCCCCCCh
Q 025786          146 FDAVMHFAAVAYVGESTLDPL----KYYHNITSNTLVVLESMARH--GVDTLIYSSTCATYGEPEKMPITEETPQAPINP  219 (248)
Q Consensus       146 iD~li~~Ag~~~~~~~~~~~~----~~~~~~~~~~~~ll~~~~~~--~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~  219 (248)
                      +|+||||||+.......+.+.    ..++.|+.++..+.+.+...  ..++||++||..+++            .++...
T Consensus        81 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~------------~~~~~~  148 (263)
T 2a4k_A           81 LHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGLG------------AFGLAH  148 (263)
T ss_dssp             CCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTCC------------HHHHHH
T ss_pred             CcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecchhcC------------CCCcHH
Confidence            999999999865444333333    34456666666655554432  257999999987752            123568


Q ss_pred             HHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          220 YGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       220 Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      |+.||++.+.+++.++.+   .|+++++++|
T Consensus       149 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~P  179 (263)
T 2a4k_A          149 YAAGKLGVVGLARTLALELARKGVRVNVLLP  179 (263)
T ss_dssp             HHHCSSHHHHHHHHHHHHHTTTTCEEEEEEE
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhCcEEEEEEe
Confidence            999999999999999987   5899999998

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=99.93  E-value=3.6e-25  Score=183.21  Aligned_cols=165  Identities=14%  Similarity=0.094  Sum_probs=121.4

Q ss_pred             eEEEEecCCchhHHHHHHHHHH---CCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc----
Q 025786           71 THVLVTGGAGYIGSHAALRLLK---DSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----  143 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~---~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~----  143 (248)
                      |+++||||+||||++++++|++   +|++|++++|+....++..+.++... .+.++.++.+|++|++++++++++    
T Consensus         7 k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   85 (259)
T 1oaa_A            7 AVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQ-PDLKVVLAAADLGTEAGVQRLLSAVREL   85 (259)
T ss_dssp             EEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHC-TTSEEEEEECCTTSHHHHHHHHHHHHHS
T ss_pred             cEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhC-CCCeEEEEecCCCCHHHHHHHHHHHHhc
Confidence            8999999999999999999999   89999999975433222222222211 134688999999999999888754    


Q ss_pred             ---CCCC--EEEEccccccc--CCCCC-----CchhhHhhhHHHHHHHHHHHH----Hc--CCCEEEEeccceecCCCCC
Q 025786          144 ---NAFD--AVMHFAAVAYV--GESTL-----DPLKYYHNITSNTLVVLESMA----RH--GVDTLIYSSTCATYGEPEK  205 (248)
Q Consensus       144 ---~~iD--~li~~Ag~~~~--~~~~~-----~~~~~~~~~~~~~~~ll~~~~----~~--~~~~iV~~SS~~~~g~~~~  205 (248)
                         +++|  +||||||+...  .+..+     ..+..++.|+.++..+...+.    ++  +.++||++||.+++.    
T Consensus        86 ~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~~~----  161 (259)
T 1oaa_A           86 PRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQ----  161 (259)
T ss_dssp             CCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTS----
T ss_pred             cccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchhcC----
Confidence               3678  99999997532  11222     223345566666665555443    33  346899999988762    


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHHHHHHHHhhcCC-CcEEEEec
Q 025786          206 MPITEETPQAPINPYGKAKKMAEDIILDFSKNSD-MAVLQCHR  247 (248)
Q Consensus       206 ~~~~e~~~~~~~~~Y~~sK~a~e~l~~~~~~~~g-i~~~~v~P  247 (248)
                             +.++...|+.||++.+.+++.++.+++ +++++|+|
T Consensus       162 -------~~~~~~~Y~asKaa~~~~~~~la~e~~~i~vn~v~P  197 (259)
T 1oaa_A          162 -------PYKGWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAP  197 (259)
T ss_dssp             -------CCTTCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEEC
T ss_pred             -------CCCCccHHHHHHHHHHHHHHHHHhhCCCceEEEecC
Confidence                   344577899999999999999999864 99999998

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.93  E-value=3e-25  Score=181.26  Aligned_cols=154  Identities=18%  Similarity=0.200  Sum_probs=119.0

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-------
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-------  143 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-------  143 (248)
                      |+++||||+||||++++++|+++|++|++++|+....+             ....++.+|++|.+++++++++       
T Consensus         4 k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~-------------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   70 (236)
T 1ooe_A            4 GKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA-------------DSNILVDGNKNWTEQEQSILEQTASSLQG   70 (236)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS-------------SEEEECCTTSCHHHHHHHHHHHHHHHHTT
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc-------------cccEEEeCCCCCHHHHHHHHHHHHHHhCC
Confidence            89999999999999999999999999999997543211             1356788999999999888764       


Q ss_pred             CCCCEEEEcccccccCCC-CCCc----hhhHhhhHHHHHHHHHHHHHc--CCCEEEEeccceecCCCCCCCCCCCCCCCC
Q 025786          144 NAFDAVMHFAAVAYVGES-TLDP----LKYYHNITSNTLVVLESMARH--GVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (248)
Q Consensus       144 ~~iD~li~~Ag~~~~~~~-~~~~----~~~~~~~~~~~~~ll~~~~~~--~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~  216 (248)
                      +++|+||||||+....+. .+.+    +..++.|+.++..+.+.+.+.  ..++||++||..++.           +.++
T Consensus        71 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~  139 (236)
T 1ooe_A           71 SQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMG-----------PTPS  139 (236)
T ss_dssp             CCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGS-----------CCTT
T ss_pred             CCCCEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchhhcc-----------CCCC
Confidence            489999999997654333 2333    334456666666666655442  236999999988762           3445


Q ss_pred             CChHHHHHHHHHHHHHHHhhcCC-----CcEEEEecC
Q 025786          217 INPYGKAKKMAEDIILDFSKNSD-----MAVLQCHRF  248 (248)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~~~~~g-----i~~~~v~Pf  248 (248)
                      ...|+.||++.+.+++.++.+++     +++++++|-
T Consensus       140 ~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg  176 (236)
T 1ooe_A          140 MIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPV  176 (236)
T ss_dssp             BHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEES
T ss_pred             cHHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEecC
Confidence            77899999999999999998764     999999993

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=99.93  E-value=1.8e-24  Score=182.77  Aligned_cols=166  Identities=13%  Similarity=0.074  Sum_probs=123.9

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhc--CCCCceEEEEccCCCHHHHHHHhhc-----
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELF--PEPGRLQFIYADLGDAKAVNKFFSE-----  143 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~~Dl~~~~~~~~~~~~-----  143 (248)
                      |+|+||||+||||++++++|+++|++|++++|+....+...+.++...  ..+.++.++.+|++|.+++++++++     
T Consensus        19 k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   98 (303)
T 1yxm_A           19 QVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLDTF   98 (303)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHHHHHc
Confidence            899999999999999999999999999999975433222222222211  1245789999999999999988875     


Q ss_pred             CCCCEEEEcccccccCCCCCC----chhhHhhhHHHHHHHHHHHHH----cCCCEEEEeccceecCCCCCCCCCCCCCCC
Q 025786          144 NAFDAVMHFAAVAYVGESTLD----PLKYYHNITSNTLVVLESMAR----HGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (248)
Q Consensus       144 ~~iD~li~~Ag~~~~~~~~~~----~~~~~~~~~~~~~~ll~~~~~----~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~  215 (248)
                      +++|+||||||........+.    .+..++.|+.++.+++..+..    .+.++||++||.. +.           +.+
T Consensus        99 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~-~~-----------~~~  166 (303)
T 1yxm_A           99 GKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPT-KA-----------GFP  166 (303)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCC-TT-----------CCT
T ss_pred             CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeec-cc-----------CCC
Confidence            579999999997543332222    234456777777766665433    3457999999976 31           233


Q ss_pred             CCChHHHHHHHHHHHHHHHhhcC---CCcEEEEecC
Q 025786          216 PINPYGKAKKMAEDIILDFSKNS---DMAVLQCHRF  248 (248)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~~~~~---gi~~~~v~Pf  248 (248)
                      +...|+.||++.+.+++.++.++   |+++++++|.
T Consensus       167 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg  202 (303)
T 1yxm_A          167 LAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPG  202 (303)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEC
T ss_pred             cchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEecC
Confidence            46789999999999999999885   8999999994

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=99.93  E-value=2e-24  Score=180.78  Aligned_cols=161  Identities=19%  Similarity=0.197  Sum_probs=121.1

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc----CC
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----NA  145 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~----~~  145 (248)
                      +|++|||||+||||++++++|+++|++|++++|+.   +...+..+++   +.++.++++|++|.+++++++++    ++
T Consensus        30 ~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~---~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  103 (281)
T 3ppi_A           30 GASAIVSGGAGGLGEATVRRLHADGLGVVIADLAA---EKGKALADEL---GNRAEFVSTNVTSEDSVLAAIEAANQLGR  103 (281)
T ss_dssp             TEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH---HHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHTTSSE
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCh---HHHHHHHHHh---CCceEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence            39999999999999999999999999999999643   2333333343   35789999999999999988875    57


Q ss_pred             CCEEEEc-ccccccCCC-----CCC----chhhHhhhHHHHHH----HHHHHHH------cCCCEEEEeccceecCCCCC
Q 025786          146 FDAVMHF-AAVAYVGES-----TLD----PLKYYHNITSNTLV----VLESMAR------HGVDTLIYSSTCATYGEPEK  205 (248)
Q Consensus       146 iD~li~~-Ag~~~~~~~-----~~~----~~~~~~~~~~~~~~----ll~~~~~------~~~~~iV~~SS~~~~g~~~~  205 (248)
                      +|+|||| ||.......     .+.    .+..++.|+.++.+    +++.+.+      .+.++||++||.+++.    
T Consensus       104 id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----  179 (281)
T 3ppi_A          104 LRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYE----  179 (281)
T ss_dssp             EEEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGTS----
T ss_pred             CCeEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecccccC----
Confidence            9999999 554332221     112    23445556555544    4445544      3457999999988762    


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          206 MPITEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       206 ~~~~e~~~~~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                             +.++...|+.||++.+.+++.++.+   .|+++++++|
T Consensus       180 -------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~P  217 (281)
T 3ppi_A          180 -------GQIGQTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAP  217 (281)
T ss_dssp             -------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE
T ss_pred             -------CCCCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEec
Confidence                   3445779999999999999999988   4899999998

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=99.93  E-value=9.7e-25  Score=180.22  Aligned_cols=162  Identities=15%  Similarity=0.170  Sum_probs=113.3

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHh-hc-CCCC
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFF-SE-NAFD  147 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~-~~-~~iD  147 (248)
                      ||+++||||+||||++++++|+++|++|++++|+....+...+ ++..   +.++..+  |..+.+.+.+.+ ++ +++|
T Consensus         1 Mk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-l~~~---~~~~~~~--d~~~v~~~~~~~~~~~g~iD   74 (254)
T 1zmt_A            1 MSTAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEA-FAET---YPQLKPM--SEQEPAELIEAVTSAYGQVD   74 (254)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHH-HHHH---CTTSEEC--CCCSHHHHHHHHHHHHSCCC
T ss_pred             CeEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-HHhc---CCcEEEE--CHHHHHHHHHHHHHHhCCCC
Confidence            5899999999999999999999999999999876544333222 2222   2344433  555544332222 22 6899


Q ss_pred             EEEEccccc-ccCCCCCCchh----hHhhhHHHHH----HHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCCC
Q 025786          148 AVMHFAAVA-YVGESTLDPLK----YYHNITSNTL----VVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPIN  218 (248)
Q Consensus       148 ~li~~Ag~~-~~~~~~~~~~~----~~~~~~~~~~----~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~  218 (248)
                      +||||||+. ...+..+.+.+    .++.|+.++.    .+++.|++++.++||++||..++.           +.++..
T Consensus        75 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~~~  143 (254)
T 1zmt_A           75 VLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFG-----------PWKELS  143 (254)
T ss_dssp             EEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTS-----------CCTTCH
T ss_pred             EEEECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCccccc-----------CCCCch
Confidence            999999986 43333333333    3445555543    466677777778999999977762           334567


Q ss_pred             hHHHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          219 PYGKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       219 ~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                      .|+.||++.+.+++.++.+   +|+++++++|-
T Consensus       144 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG  176 (254)
T 1zmt_A          144 TYTSARAGACTLANALSKELGEYNIPVFAIGPN  176 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCCEEEEEES
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecC
Confidence            8999999999999999988   48999999993

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=99.92  E-value=6.4e-25  Score=204.10  Aligned_cols=169  Identities=22%  Similarity=0.343  Sum_probs=137.4

Q ss_pred             CceEEEEecCCchhHHHHHHHHHHC-CCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHH-HHHHhhcCCC
Q 025786           69 GVTHVLVTGGAGYIGSHAALRLLKD-SYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKA-VNKFFSENAF  146 (248)
Q Consensus        69 ~~k~vlITGasg~IG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~-~~~~~~~~~i  146 (248)
                      .+|+||||||+||||++++++|+++ |++|++++|+......       +. ...++.++.+|++|.++ +.++++  ++
T Consensus       314 ~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~-------~~-~~~~v~~v~~Dl~d~~~~~~~~~~--~~  383 (660)
T 1z7e_A          314 RRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISR-------FL-NHPHFHFVEGDISIHSEWIEYHVK--KC  383 (660)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGG-------GT-TCTTEEEEECCTTTCHHHHHHHHH--HC
T ss_pred             cCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhh-------hc-cCCceEEEECCCCCcHHHHHHhhc--CC
Confidence            3489999999999999999999998 8999999976433211       11 13468899999998765 777776  68


Q ss_pred             CEEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCC-------CCCCh
Q 025786          147 DAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQ-------APINP  219 (248)
Q Consensus       147 D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~-------~~~~~  219 (248)
                      |+||||||.........++.+.++.|+.++.++++++.+.+ ++||++||.++||.....+++|+.+.       .|.+.
T Consensus       384 D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~-~r~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~~~  462 (660)
T 1z7e_A          384 DVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR-KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWI  462 (660)
T ss_dssp             SEEEECCCCCCTHHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CEEEEECCGGGGBTCCSSSBCTTTCCEEECCTTCTTHH
T ss_pred             CEEEECceecCccccccCHHHHHHhhhHHHHHHHHHHHHhC-CEEEEEecHHHcCCCCCcccCCCccccccCcccCCCCC
Confidence            99999999754322234566778889999999999999887 89999999999987766677787642       45668


Q ss_pred             HHHHHHHHHHHHHHHhhcCCCcEEEEecC
Q 025786          220 YGKAKKMAEDIILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       220 Y~~sK~a~e~l~~~~~~~~gi~~~~v~Pf  248 (248)
                      |+.||.++|.+++.++.++|++++++||+
T Consensus       463 Y~~sK~~~E~~~~~~~~~~gi~~~ilRpg  491 (660)
T 1z7e_A          463 YSVSKQLLDRVIWAYGEKEGLQFTLFRPF  491 (660)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCCCEEEEEEC
T ss_pred             cHHHHHHHHHHHHHHHHHcCCCEEEECCC
Confidence            99999999999999998889999999995

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=99.92  E-value=8e-25  Score=186.59  Aligned_cols=163  Identities=18%  Similarity=0.148  Sum_probs=118.7

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecC------CCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNL------SRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-  143 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~------~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-  143 (248)
                      |+++||||+||||++++++|+++|++|+++++.      .++.+...+..+++......   ..+|++|.+++++++++ 
T Consensus        10 k~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~---~~~D~~~~~~~~~~~~~~   86 (319)
T 1gz6_A           10 RVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGK---AVANYDSVEAGEKLVKTA   86 (319)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCE---EEEECCCGGGHHHHHHHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCCe---EEEeCCCHHHHHHHHHHH
Confidence            899999999999999999999999999998753      12333333333333222222   35799999887777654 


Q ss_pred             ----CCCCEEEEcccccccCCCCC----CchhhHhhhHHHH----HHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCC
Q 025786          144 ----NAFDAVMHFAAVAYVGESTL----DPLKYYHNITSNT----LVVLESMARHGVDTLIYSSTCATYGEPEKMPITEE  211 (248)
Q Consensus       144 ----~~iD~li~~Ag~~~~~~~~~----~~~~~~~~~~~~~----~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~  211 (248)
                          +++|+||||||+.......+    ..+..++.|+.++    ..+++.|++++.++||++||.+.+.          
T Consensus        87 ~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~grIV~vsS~~~~~----------  156 (319)
T 1gz6_A           87 LDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIY----------  156 (319)
T ss_dssp             HHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH----------
T ss_pred             HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhcc----------
Confidence                68999999999865433222    2233455666664    4466777777778999999975531          


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          212 TPQAPINPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       212 ~~~~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                       +.++...|+.||++.+.+++.++.+   +||++++|+|
T Consensus       157 -~~~~~~~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~P  194 (319)
T 1gz6_A          157 -GNFGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAP  194 (319)
T ss_dssp             -CCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEE
T ss_pred             -CCCCCHHHHHHHHHHHHHHHHHHHHhcccCEEEEEEeC
Confidence             1224678999999999999999988   4899999999

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=99.92  E-value=7.8e-25  Score=180.52  Aligned_cols=152  Identities=14%  Similarity=0.141  Sum_probs=119.2

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~  144 (248)
                      +|+|+||||+||||++++++|+++|++|++++|+..+.               ....+.+|++|.+++++++++     +
T Consensus        22 ~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~---------------~~~~~~~d~~d~~~v~~~~~~~~~~~g   86 (251)
T 3orf_A           22 SKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPN---------------ADHSFTIKDSGEEEIKSVIEKINSKSI   86 (251)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTT---------------SSEEEECSCSSHHHHHHHHHHHHTTTC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccc---------------cccceEEEeCCHHHHHHHHHHHHHHcC
Confidence            48999999999999999999999999999999754321               113478999999999988875     5


Q ss_pred             CCCEEEEcccccccCC-CCCC----chhhHhhhHHHHHHHHHHHHHc--CCCEEEEeccceecCCCCCCCCCCCCCCCCC
Q 025786          145 AFDAVMHFAAVAYVGE-STLD----PLKYYHNITSNTLVVLESMARH--GVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (248)
Q Consensus       145 ~iD~li~~Ag~~~~~~-~~~~----~~~~~~~~~~~~~~ll~~~~~~--~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (248)
                      ++|+||||||+..... ..+.    .+..++.|+.++..+++.+...  ..++||++||..++.           +.++.
T Consensus        87 ~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~~  155 (251)
T 3orf_A           87 KVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAALN-----------RTSGM  155 (251)
T ss_dssp             CEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGS-----------CCTTB
T ss_pred             CCCEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhhcc-----------CCCCC
Confidence            8999999999864433 2222    2344556777777776666542  236999999988762           34557


Q ss_pred             ChHHHHHHHHHHHHHHHhhc-----CCCcEEEEec
Q 025786          218 NPYGKAKKMAEDIILDFSKN-----SDMAVLQCHR  247 (248)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~~~~-----~gi~~~~v~P  247 (248)
                      ..|+.||++.+.+++.++.+     .|+++++++|
T Consensus       156 ~~Y~~sKaa~~~~~~~la~e~~~~~~gi~v~~v~P  190 (251)
T 3orf_A          156 IAYGATKAATHHIIKDLASENGGLPAGSTSLGILP  190 (251)
T ss_dssp             HHHHHHHHHHHHHHHHHTSTTSSSCTTCEEEEEEE
T ss_pred             chhHHHHHHHHHHHHHHHHHhcccCCCcEEEEEec
Confidence            78999999999999999988     5799999998

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=99.92  E-value=2.2e-25  Score=184.01  Aligned_cols=159  Identities=11%  Similarity=0.038  Sum_probs=120.7

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc--CCCC
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE--NAFD  147 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~~iD  147 (248)
                      ||+++||||+||||++++++|+++|++|++++|+..+.+.               . +.+|++|.+++++++++  +++|
T Consensus         1 mk~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~---------------~-~~~Dl~~~~~v~~~~~~~~~~id   64 (257)
T 1fjh_A            1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA---------------D-LSTAEGRKQAIADVLAKCSKGMD   64 (257)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC---------------C-TTSHHHHHHHHHHHHTTCTTCCS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc---------------c-cccCCCCHHHHHHHHHHhCCCCC
Confidence            5899999999999999999999999999999975432110               1 57899999999999875  4789


Q ss_pred             EEEEcccccccCCCCCCchhhHhhhHHHHHH----HHHHHHHcCCCEEEEeccceecCCCCCCCCCCC------------
Q 025786          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEE------------  211 (248)
Q Consensus       148 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~----ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~------------  211 (248)
                      +||||||+...   ....+..++.|+.++..    +++.|++++.++||++||.+++......+..+.            
T Consensus        65 ~lv~~Ag~~~~---~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~  141 (257)
T 1fjh_A           65 GLVLCAGLGPQ---TKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARA  141 (257)
T ss_dssp             EEEECCCCCTT---CSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHH
T ss_pred             EEEECCCCCCC---cccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhhccccccchhhhhhcccchhhhhh
Confidence            99999997541   12356677888777555    455555666789999999888732111110000            


Q ss_pred             -----CCCCCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          212 -----TPQAPINPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       212 -----~~~~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                           .+.++...|+.||++.+.+++.++.+   .|+++++++|
T Consensus       142 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~P  185 (257)
T 1fjh_A          142 IVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAP  185 (257)
T ss_dssp             HHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEE
T ss_pred             hhhcccCCCCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEee
Confidence                 12234678999999999999999987   6899999998

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=99.92  E-value=8.5e-25  Score=174.16  Aligned_cols=146  Identities=12%  Similarity=0.088  Sum_probs=116.9

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-CCCCEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-NAFDAV  149 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-~~iD~l  149 (248)
                      |+++||||+||||++++++|+ +|++|++++|+..                    .+.+|++|++++++++++ +++|+|
T Consensus         4 M~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~--------------------~~~~D~~~~~~~~~~~~~~~~~d~v   62 (202)
T 3d7l_A            4 MKILLIGASGTLGSAVKERLE-KKAEVITAGRHSG--------------------DVTVDITNIDSIKKMYEQVGKVDAI   62 (202)
T ss_dssp             CEEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS--------------------SEECCTTCHHHHHHHHHHHCCEEEE
T ss_pred             cEEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc--------------------ceeeecCCHHHHHHHHHHhCCCCEE
Confidence            479999999999999999999 9999999986421                    378999999999999876 579999


Q ss_pred             EEcccccccCCCCCCch----hhHhhhHHHHHHHHHHHHHc--CCCEEEEeccceecCCCCCCCCCCCCCCCCCChHHHH
Q 025786          150 MHFAAVAYVGESTLDPL----KYYHNITSNTLVVLESMARH--GVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKA  223 (248)
Q Consensus       150 i~~Ag~~~~~~~~~~~~----~~~~~~~~~~~~ll~~~~~~--~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~s  223 (248)
                      |||||........+.+.    ..++.|..++.++++.+.+.  +.++||++||..++.           +.++...|+.|
T Consensus        63 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~-----------~~~~~~~Y~~s  131 (202)
T 3d7l_A           63 VSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDKGSFTLTTGIMMED-----------PIVQGASAAMA  131 (202)
T ss_dssp             EECCCCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEEEEEEEECCGGGTS-----------CCTTCHHHHHH
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccCCEEEEEcchhhcC-----------CCCccHHHHHH
Confidence            99999764433322222    34456777788888877654  126999999977652           34456789999


Q ss_pred             HHHHHHHHHHHhhcC--CCcEEEEecC
Q 025786          224 KKMAEDIILDFSKNS--DMAVLQCHRF  248 (248)
Q Consensus       224 K~a~e~l~~~~~~~~--gi~~~~v~Pf  248 (248)
                      |++.|.+++.++.++  |+++++++|.
T Consensus       132 K~~~~~~~~~~~~e~~~gi~v~~v~pg  158 (202)
T 3d7l_A          132 NGAVTAFAKSAAIEMPRGIRINTVSPN  158 (202)
T ss_dssp             HHHHHHHHHHHTTSCSTTCEEEEEEEC
T ss_pred             HHHHHHHHHHHHHHccCCeEEEEEecC
Confidence            999999999999875  9999999994

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=99.92  E-value=2.1e-24  Score=177.09  Aligned_cols=155  Identities=15%  Similarity=0.185  Sum_probs=120.9

Q ss_pred             ceEEEEecCCchhHHHHHHHHHH-CCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc---CC
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLK-DSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE---NA  145 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~-~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~---~~  145 (248)
                      ||++|||||+||||++++++|++ .|++|++++|.....             ...+.++++|++|.++++++++.   ++
T Consensus         4 ~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~-------------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   70 (244)
T 4e4y_A            4 MANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFS-------------AENLKFIKADLTKQQDITNVLDIIKNVS   70 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCC-------------CTTEEEEECCTTCHHHHHHHHHHTTTCC
T ss_pred             CCeEEEeCCCChHHHHHHHHHHhcCCcEEEEeccccccc-------------cccceEEecCcCCHHHHHHHHHHHHhCC
Confidence            48999999999999999999999 789999888643211             23568899999999999988854   48


Q ss_pred             CCEEEEcccccccCCCCCCchh----hHhhhHHHHHHHHHHHHHc--CCCEEEEeccceecCCCCCCCCCCCCCCCCCCh
Q 025786          146 FDAVMHFAAVAYVGESTLDPLK----YYHNITSNTLVVLESMARH--GVDTLIYSSTCATYGEPEKMPITEETPQAPINP  219 (248)
Q Consensus       146 iD~li~~Ag~~~~~~~~~~~~~----~~~~~~~~~~~ll~~~~~~--~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~  219 (248)
                      +|+||||||+.......+.+.+    .++.|+.++..+.+.+...  ..++||++||...+.           +.++...
T Consensus        71 id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~-----------~~~~~~~  139 (244)
T 4e4y_A           71 FDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSDQCFI-----------AKPNSFA  139 (244)
T ss_dssp             EEEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCGGGTC-----------CCTTBHH
T ss_pred             CCEEEECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECCHHHcc-----------CCCCCch
Confidence            9999999998755444333333    4456666677776666543  125899999987762           3445678


Q ss_pred             HHHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          220 YGKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       220 Y~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                      |+.||++.+.+++.++.|   +|+++++++|.
T Consensus       140 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG  171 (244)
T 4e4y_A          140 YTLSKGAIAQMTKSLALDLAKYQIRVNTVCPG  171 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEES
T ss_pred             hHHHHHHHHHHHHHHHHHHHHcCeEEEEEecC
Confidence            999999999999999986   68999999993

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=99.92  E-value=1.7e-25  Score=178.67  Aligned_cols=157  Identities=16%  Similarity=0.138  Sum_probs=123.7

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-CCCCEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-NAFDAV  149 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-~~iD~l  149 (248)
                      |+++||||+||||++++++|+++  +|++++|+..   ...+..+++.    . .++.+|++|++++++++++ +++|+|
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~---~~~~~~~~~~----~-~~~~~D~~~~~~~~~~~~~~~~id~v   70 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAG---ALAELAREVG----A-RALPADLADELEAKALLEEAGPLDLL   70 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHH---HHHHHHHHHT----C-EECCCCTTSHHHHHHHHHHHCSEEEE
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHH---HHHHHHHhcc----C-cEEEeeCCCHHHHHHHHHhcCCCCEE
Confidence            57999999999999999999999  9999986432   2222222221    1 7889999999999999875 579999


Q ss_pred             EEcccccccCCC----CCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCCChHHHHHH
Q 025786          150 MHFAAVAYVGES----TLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKK  225 (248)
Q Consensus       150 i~~Ag~~~~~~~----~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~  225 (248)
                      |||||.......    .+..+..++.|..++..+++.+.+.+.++||++||..++.           +.++...|+.||+
T Consensus        71 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~sS~~~~~-----------~~~~~~~Y~~sK~  139 (207)
T 2yut_A           71 VHAVGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHARFQKGARAVFFGAYPRYV-----------QVPGFAAYAAAKG  139 (207)
T ss_dssp             EECCCCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCHHHH-----------SSTTBHHHHHHHH
T ss_pred             EECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHhcCCcEEEEEcChhhcc-----------CCCCcchHHHHHH
Confidence            999997644332    2334456677888888888888666667999999988773           3345779999999


Q ss_pred             HHHHHHHHHhhc---CCCcEEEEecC
Q 025786          226 MAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       226 a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                      +.+.+++.++.+   .|+++++++|.
T Consensus       140 a~~~~~~~~~~~~~~~gi~v~~v~pg  165 (207)
T 2yut_A          140 ALEAYLEAARKELLREGVHLVLVRLP  165 (207)
T ss_dssp             HHHHHHHHHHHHHHTTTCEEEEECCC
T ss_pred             HHHHHHHHHHHHHhhhCCEEEEEecC
Confidence            999999999988   69999999984

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=99.92  E-value=8.8e-25  Score=181.58  Aligned_cols=175  Identities=19%  Similarity=0.160  Sum_probs=127.4

Q ss_pred             ceEEEEecCCchhHHHHHHHHHH-CCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLK-DSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~-~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----  143 (248)
                      +|+|+||||+||||++++++|++ +|++|++++|+....+...+.++.   .+.++.++.+|++|.+++++++++     
T Consensus         4 ~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~---~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   80 (276)
T 1wma_A            4 IHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQA---EGLSPRFHQLDIDDLQSIRALRDFLRKEY   80 (276)
T ss_dssp             CCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHH---TTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHh---cCCeeEEEECCCCCHHHHHHHHHHHHHhc
Confidence            38999999999999999999999 999999999754332222222222   245788999999999999988875     


Q ss_pred             CCCCEEEEcccccccCCCC----CCchhhHhhhHHHHHHHHHHHHHc--CCCEEEEeccceecCC-CC----------CC
Q 025786          144 NAFDAVMHFAAVAYVGEST----LDPLKYYHNITSNTLVVLESMARH--GVDTLIYSSTCATYGE-PE----------KM  206 (248)
Q Consensus       144 ~~iD~li~~Ag~~~~~~~~----~~~~~~~~~~~~~~~~ll~~~~~~--~~~~iV~~SS~~~~g~-~~----------~~  206 (248)
                      +++|+||||||........    +..+..++.|+.++.+++..+.+.  ..++||++||..++.. ..          ..
T Consensus        81 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~  160 (276)
T 1wma_A           81 GGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSE  160 (276)
T ss_dssp             SSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHHHCS
T ss_pred             CCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECChhhhcccccCChhHHhhcccc
Confidence            5899999999976433222    223445677888888888887654  2359999999876621 00          00


Q ss_pred             CCCCC-------------------CCCCCCChHHHHHHHHHHHHHHHhhc-------CCCcEEEEec
Q 025786          207 PITEE-------------------TPQAPINPYGKAKKMAEDIILDFSKN-------SDMAVLQCHR  247 (248)
Q Consensus       207 ~~~e~-------------------~~~~~~~~Y~~sK~a~e~l~~~~~~~-------~gi~~~~v~P  247 (248)
                      +++|+                   .+..|...|+.||++++.+++.++.+       .|+++++++|
T Consensus       161 ~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~P  227 (276)
T 1wma_A          161 TITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCP  227 (276)
T ss_dssp             SCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEEC
T ss_pred             ccchhhhhhhhhhhhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecC
Confidence            11111                   11224589999999999999999877       5899999998

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.92  E-value=7e-25  Score=177.10  Aligned_cols=156  Identities=12%  Similarity=0.013  Sum_probs=118.6

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li  150 (248)
                      |+|+||||||+||++++++|+++|++|++++|+..+   .    ..+.  ..++.++.+|++|.++  +.+.  ++|+||
T Consensus         1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~---~----~~~~--~~~~~~~~~D~~d~~~--~~~~--~~d~vi   67 (224)
T 3h2s_A            1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQK---A----ADRL--GATVATLVKEPLVLTE--ADLD--SVDAVV   67 (224)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHH---H----HHHT--CTTSEEEECCGGGCCH--HHHT--TCSEEE
T ss_pred             CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccc---c----cccc--CCCceEEecccccccH--hhcc--cCCEEE
Confidence            469999999999999999999999999999874322   1    1111  2468899999999887  4554  789999


Q ss_pred             EcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCC-CCC--CCCCCCCCCCCCChHHHHHHHH
Q 025786          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGE-PEK--MPITEETPQAPINPYGKAKKMA  227 (248)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~-~~~--~~~~e~~~~~~~~~Y~~sK~a~  227 (248)
                      ||||....       ......|..++.+++++|++.+ ++||++||.+.+.. ...  .+.++.....|.+.|+.+|.+.
T Consensus        68 ~~ag~~~~-------~~~~~~n~~~~~~l~~a~~~~~-~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~  139 (224)
T 3h2s_A           68 DALSVPWG-------SGRGYLHLDFATHLVSLLRNSD-TLAVFILGSASLAMPGADHPMILDFPESAASQPWYDGALYQY  139 (224)
T ss_dssp             ECCCCCTT-------SSCTHHHHHHHHHHHHTCTTCC-CEEEEECCGGGSBCTTCSSCGGGGCCGGGGGSTTHHHHHHHH
T ss_pred             ECCccCCC-------cchhhHHHHHHHHHHHHHHHcC-CcEEEEecceeeccCCCCccccccCCCCCccchhhHHHHHHH
Confidence            99997521       1124568888999999999988 89999999866543 222  1233334444578999999999


Q ss_pred             HHHHHHHhhcCCCcEEEEecC
Q 025786          228 EDIILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       228 e~l~~~~~~~~gi~~~~v~Pf  248 (248)
                      |.+ ..+.++.+++++++||.
T Consensus       140 e~~-~~~~~~~~i~~~ivrp~  159 (224)
T 3h2s_A          140 YEY-QFLQMNANVNWIGISPS  159 (224)
T ss_dssp             HHH-HHHTTCTTSCEEEEEEC
T ss_pred             HHH-HHHHhcCCCcEEEEcCc
Confidence            954 56667789999999994

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=99.92  E-value=8.9e-25  Score=179.66  Aligned_cols=160  Identities=13%  Similarity=0.049  Sum_probs=121.8

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc--CCCC
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE--NAFD  147 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~~iD  147 (248)
                      ||+||||||+||||++++++|+++|++|++++|+..+.+          .      .+.+|++|.+++++++++  +++|
T Consensus         1 Mk~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~----------~------~~~~D~~~~~~~~~~~~~~~~~~d   64 (255)
T 2dkn_A            1 MSVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIE----------A------DLSTPGGRETAVAAVLDRCGGVLD   64 (255)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEE----------C------CTTSHHHHHHHHHHHHHHHTTCCS
T ss_pred             CcEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHcc----------c------cccCCcccHHHHHHHHHHcCCCcc
Confidence            579999999999999999999999999999997543211          0      157899999999988875  4799


Q ss_pred             EEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHH----HcCCCEEEEeccceecCCCCCCC-C-------CCCC---
Q 025786          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMA----RHGVDTLIYSSTCATYGEPEKMP-I-------TEET---  212 (248)
Q Consensus       148 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~----~~~~~~iV~~SS~~~~g~~~~~~-~-------~e~~---  212 (248)
                      +||||||....   ....+..++.|+.++.++++.+.    +.+.++||++||..+|+.....+ .       +|+.   
T Consensus        65 ~vi~~Ag~~~~---~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~  141 (255)
T 2dkn_A           65 GLVCCAGVGVT---AANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAAELPMVEAMLAGDEARAIE  141 (255)
T ss_dssp             EEEECCCCCTT---SSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTTGGGCHHHHHHHHTCHHHHHH
T ss_pred             EEEECCCCCCc---chhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEeccccccccccccchhhhhcccchhhhhh
Confidence            99999997542   23466778888888877766544    44568999999998886431100 0       0000   


Q ss_pred             ----CCCCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          213 ----PQAPINPYGKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       213 ----~~~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                          ..++...|+.||++++.+++.++.+   .|+++++++|.
T Consensus       142 ~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg  184 (255)
T 2dkn_A          142 LAEQQGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPG  184 (255)
T ss_dssp             HHHHHCCHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEEC
T ss_pred             hccccCCcchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCC
Confidence                0135678999999999999999987   79999999994

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=99.91  E-value=3.3e-24  Score=173.66  Aligned_cols=144  Identities=18%  Similarity=0.148  Sum_probs=115.4

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-CCCCE
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-NAFDA  148 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-~~iD~  148 (248)
                      +|+++||||+||||++++++|+++|++|++++|+..                       +|++|++++++++++ +++|+
T Consensus         6 ~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~-----------------------~D~~~~~~v~~~~~~~g~id~   62 (223)
T 3uce_A            6 KTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG-----------------------LDISDEKSVYHYFETIGAFDH   62 (223)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT-----------------------CCTTCHHHHHHHHHHHCSEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc-----------------------cCCCCHHHHHHHHHHhCCCCE
Confidence            389999999999999999999999999999885321                       899999999999987 68999


Q ss_pred             EEEccccc-ccCCCCCCch----hhHhhhHHHHHHHHHHHHHc--CCCEEEEeccceecCCCCCCCCCCCCCCCCCChHH
Q 025786          149 VMHFAAVA-YVGESTLDPL----KYYHNITSNTLVVLESMARH--GVDTLIYSSTCATYGEPEKMPITEETPQAPINPYG  221 (248)
Q Consensus       149 li~~Ag~~-~~~~~~~~~~----~~~~~~~~~~~~ll~~~~~~--~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~  221 (248)
                      ||||||.. ...+..+.+.    ..++.|+.++..+.+.+.+.  +.++||++||...+.           +.++...|+
T Consensus        63 lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~-----------~~~~~~~Y~  131 (223)
T 3uce_A           63 LIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLSRK-----------VVANTYVKA  131 (223)
T ss_dssp             EEECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGGTS-----------CCTTCHHHH
T ss_pred             EEECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchhhcc-----------CCCCchHHH
Confidence            99999986 3333333333    34556667777777766543  236899999987763           345577999


Q ss_pred             HHHHHHHHHHHHHhhcCC-CcEEEEec
Q 025786          222 KAKKMAEDIILDFSKNSD-MAVLQCHR  247 (248)
Q Consensus       222 ~sK~a~e~l~~~~~~~~g-i~~~~v~P  247 (248)
                      .||++.+.+++.++.+++ +++++++|
T Consensus       132 asK~a~~~~~~~la~e~~~i~vn~v~P  158 (223)
T 3uce_A          132 AINAAIEATTKVLAKELAPIRVNAISP  158 (223)
T ss_dssp             HHHHHHHHHHHHHHHHHTTSEEEEEEE
T ss_pred             HHHHHHHHHHHHHHHhhcCcEEEEEEe
Confidence            999999999999999965 99999998

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.91  E-value=4.3e-24  Score=174.46  Aligned_cols=152  Identities=21%  Similarity=0.226  Sum_probs=118.3

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc----CCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----NAF  146 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~----~~i  146 (248)
                      |+++||||+||||++++++|+++|++|++++|+.. .              .++.++.+|++|.+++++++++    +++
T Consensus         3 k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-~--------------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   67 (242)
T 1uay_A            3 RSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-G--------------EDLIYVEGDVTREEDVRRAVARAQEEAPL   67 (242)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-S--------------SSSEEEECCTTCHHHHHHHHHHHHHHSCE
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-c--------------cceEEEeCCCCCHHHHHHHHHHHHhhCCc
Confidence            89999999999999999999999999999987532 1              1357899999999999988874    489


Q ss_pred             CEEEEcccccccCCCCC--------CchhhHhhhHHHHHHHHHHHH----HcC---C---CEEEEeccceecCCCCCCCC
Q 025786          147 DAVMHFAAVAYVGESTL--------DPLKYYHNITSNTLVVLESMA----RHG---V---DTLIYSSTCATYGEPEKMPI  208 (248)
Q Consensus       147 D~li~~Ag~~~~~~~~~--------~~~~~~~~~~~~~~~ll~~~~----~~~---~---~~iV~~SS~~~~g~~~~~~~  208 (248)
                      |+||||||........+        ..+..++.|..++.++++.+.    +.+   .   ++||++||..++.       
T Consensus        68 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~-------  140 (242)
T 1uay_A           68 FAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFE-------  140 (242)
T ss_dssp             EEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHH-------
T ss_pred             eEEEEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhcc-------
Confidence            99999999765433222        233455667777666555543    332   2   3999999988774       


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHhhcC---CCcEEEEecC
Q 025786          209 TEETPQAPINPYGKAKKMAEDIILDFSKNS---DMAVLQCHRF  248 (248)
Q Consensus       209 ~e~~~~~~~~~Y~~sK~a~e~l~~~~~~~~---gi~~~~v~Pf  248 (248)
                          +.++...|+.||++.+.+++.++.++   |+++++++|.
T Consensus       141 ----~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg  179 (242)
T 1uay_A          141 ----GQIGQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPG  179 (242)
T ss_dssp             ----CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred             ----CCCCCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEec
Confidence                23456789999999999999998874   8999999994

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=99.91  E-value=2.3e-24  Score=190.55  Aligned_cols=171  Identities=20%  Similarity=0.209  Sum_probs=127.6

Q ss_pred             CceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchh---hhhhhhhc------CCCCceEEEEccCCCHHHHHH
Q 025786           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGA---VKVLQELF------PEPGRLQFIYADLGDAKAVNK  139 (248)
Q Consensus        69 ~~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~---~~~~~~~~------~~~~~~~~~~~Dl~~~~~~~~  139 (248)
                      .+|+||||||+|+||++++++|+++|++|++++|+....+..   .+.++...      ....++.++.+|++|.+++. 
T Consensus        68 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~-  146 (427)
T 4f6c_A           68 PLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV-  146 (427)
T ss_dssp             CCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCCC-
T ss_pred             CCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccCC-
Confidence            348999999999999999999999999999999865422221   11121110      01357899999999988887 


Q ss_pred             HhhcCCCCEEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCC-----CCCCCCCCCCC-
Q 025786          140 FFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGE-----PEKMPITEETP-  213 (248)
Q Consensus       140 ~~~~~~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~-----~~~~~~~e~~~-  213 (248)
                        ...++|+||||||....   .......++.|+.++.++++++.+ +.++||++||..+ |.     ....+++|+.+ 
T Consensus       147 --~~~~~d~Vih~A~~~~~---~~~~~~~~~~Nv~g~~~l~~aa~~-~~~~~v~~SS~~~-G~~~~~~~~~~~~~E~~~~  219 (427)
T 4f6c_A          147 --LPENMDTIIHAGARTDH---FGDDDEFEKVNVQGTVDVIRLAQQ-HHARLIYVSTISV-GTYFDIDTEDVTFSEADVY  219 (427)
T ss_dssp             --CSSCCSEEEECCCCC----------CHHHHHHHHHHHHHHHHHH-TTCEEEEEEEGGG-GSEECSSCSCCEECTTCSC
T ss_pred             --CcCCCCEEEECCcccCC---CCCHHHHHHHHHHHHHHHHHHHHh-cCCcEEEECchHh-CCCccCCCCCccccccccc
Confidence              33589999999997632   245567788999999999999988 6789999999887 43     23456777776 


Q ss_pred             --CCCCChHHHHHHHHHHHHHHHhhcCCCcEEEEecC
Q 025786          214 --QAPINPYGKAKKMAEDIILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       214 --~~~~~~Y~~sK~a~e~l~~~~~~~~gi~~~~v~Pf  248 (248)
                        ..+.+.|+.||.++|.+++.+++ .|++++++||.
T Consensus       220 ~~~~~~~~Y~~sK~~~E~~~~~~~~-~g~~~~ivRpg  255 (427)
T 4f6c_A          220 KGQLLTSPYTRSKFYSELKVLEAVN-NGLDGRIVRVG  255 (427)
T ss_dssp             SSCCCCSHHHHHHHHHHHHHHHHHH-TTCCEEEEEEC
T ss_pred             cCCCCCCchHHHHHHHHHHHHHHHH-cCCCEEEEeCC
Confidence              45788999999999999999865 69999999983

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.91  E-value=1.2e-23  Score=167.27  Aligned_cols=149  Identities=16%  Similarity=0.216  Sum_probs=119.5

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li  150 (248)
                      |+|+||||+|+||++++++|+++|++|++++|+..+...       .  ...++.++.+|++|.+++.++++  ++|+||
T Consensus         4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~-------~--~~~~~~~~~~D~~~~~~~~~~~~--~~d~vi   72 (206)
T 1hdo_A            4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPS-------E--GPRPAHVVVGDVLQAADVDKTVA--GQDAVI   72 (206)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCS-------S--SCCCSEEEESCTTSHHHHHHHHT--TCSEEE
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhccc-------c--cCCceEEEEecCCCHHHHHHHHc--CCCEEE
Confidence            689999999999999999999999999999975432211       0  13468899999999999999987  689999


Q ss_pred             EcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCCChHHHHHHHHHHH
Q 025786          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDI  230 (248)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e~l  230 (248)
                      ||||....    ..   ..+.|..++.++++++++.+.++||++||..+|+.....       ..+...|+.+|.++|.+
T Consensus        73 ~~a~~~~~----~~---~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss~~~~~~~~~~-------~~~~~~y~~~K~~~e~~  138 (206)
T 1hdo_A           73 VLLGTRND----LS---PTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKV-------PPRLQAVTDDHIRMHKV  138 (206)
T ss_dssp             ECCCCTTC----CS---CCCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCTTCS-------CGGGHHHHHHHHHHHHH
T ss_pred             ECccCCCC----CC---ccchHHHHHHHHHHHHHHhCCCeEEEEeeeeeccCcccc-------cccchhHHHHHHHHHHH
Confidence            99996532    11   124677889999999999888899999999888643321       11567899999999998


Q ss_pred             HHHHhhcCCCcEEEEecC
Q 025786          231 ILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       231 ~~~~~~~~gi~~~~v~Pf  248 (248)
                      ++    +.+++++++||.
T Consensus       139 ~~----~~~i~~~~lrp~  152 (206)
T 1hdo_A          139 LR----ESGLKYVAVMPP  152 (206)
T ss_dssp             HH----HTCSEEEEECCS
T ss_pred             HH----hCCCCEEEEeCC
Confidence            85    478999999984

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=99.91  E-value=4.3e-24  Score=177.76  Aligned_cols=160  Identities=12%  Similarity=0.065  Sum_probs=119.6

Q ss_pred             eEEEEecC--CchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----
Q 025786           71 THVLVTGG--AGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (248)
Q Consensus        71 k~vlITGa--sg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----  143 (248)
                      |+++||||  +||||++++++|+++|++|++++|+..+  ...+..+++   +.++.++.+|++|++++++++++     
T Consensus         8 k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~--~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   82 (269)
T 2h7i_A            8 KRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLR--LIQRITDRL---PAKAPLLELDVQNEEHLASLAGRVTEAI   82 (269)
T ss_dssp             CEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHH--HHHHHHTTS---SSCCCEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHH--HHHHHHHhc---CCCceEEEccCCCHHHHHHHHHHHHHHh
Confidence            89999999  9999999999999999999999874321  112222222   34678899999999999988875     


Q ss_pred             C---CCCEEEEcccccc-----cCCCCCCch----hhHhhhHHHHHHHHHHHHHc--CCCEEEEeccceecCCCCCCCCC
Q 025786          144 N---AFDAVMHFAAVAY-----VGESTLDPL----KYYHNITSNTLVVLESMARH--GVDTLIYSSTCATYGEPEKMPIT  209 (248)
Q Consensus       144 ~---~iD~li~~Ag~~~-----~~~~~~~~~----~~~~~~~~~~~~ll~~~~~~--~~~~iV~~SS~~~~g~~~~~~~~  209 (248)
                      +   ++|+||||||+..     ..+..+.+.    ..++.|+.++..+.+.+.+.  ..++||++||...+         
T Consensus        83 g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~iss~~~~---------  153 (269)
T 2h7i_A           83 GAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSR---------  153 (269)
T ss_dssp             CTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSS---------
T ss_pred             CCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEcCcccc---------
Confidence            4   8999999999764     122222222    33456666666666666542  23699999986543         


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          210 EETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       210 e~~~~~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                         +.+....|+.||++.+.+++.++.+   .|+++++|+|
T Consensus       154 ---~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~P  191 (269)
T 2h7i_A          154 ---AMPAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAA  191 (269)
T ss_dssp             ---CCTTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEE
T ss_pred             ---ccCchHHHHHHHHHHHHHHHHHHHHhcccCcEEEEEec
Confidence               2334678999999999999999988   5899999999

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.91  E-value=3.3e-24  Score=175.25  Aligned_cols=147  Identities=12%  Similarity=0.025  Sum_probs=119.8

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC--EEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~  148 (248)
                      |+|+||||+||||++++++|+++|+  +|++++|+..+.+...         ..++.++.+|++|.+++.++++  ++|+
T Consensus        19 ~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~---------~~~~~~~~~D~~d~~~~~~~~~--~~d~   87 (242)
T 2bka_A           19 KSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA---------YKNVNQEVVDFEKLDDYASAFQ--GHDV   87 (242)
T ss_dssp             CEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG---------GGGCEEEECCGGGGGGGGGGGS--SCSE
T ss_pred             CeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccc---------cCCceEEecCcCCHHHHHHHhc--CCCE
Confidence            7999999999999999999999999  9999998654332211         1257889999999999998887  7999


Q ss_pred             EEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCCChHHHHHHHHH
Q 025786          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAE  228 (248)
Q Consensus       149 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e  228 (248)
                      ||||||.....   ...+..++.|..++.++++.+++.+.++||++||.++|+.             +..+|+.||.++|
T Consensus        88 vi~~ag~~~~~---~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~-------------~~~~Y~~sK~~~e  151 (242)
T 2bka_A           88 GFCCLGTTRGK---AGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKS-------------SNFLYLQVKGEVE  151 (242)
T ss_dssp             EEECCCCCHHH---HHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTT-------------CSSHHHHHHHHHH
T ss_pred             EEECCCccccc---CCcccceeeeHHHHHHHHHHHHHCCCCEEEEEccCcCCCC-------------CcchHHHHHHHHH
Confidence            99999964321   1245667788889999999999888889999999888742             2468999999999


Q ss_pred             HHHHHHhhcCCC-cEEEEecC
Q 025786          229 DIILDFSKNSDM-AVLQCHRF  248 (248)
Q Consensus       229 ~l~~~~~~~~gi-~~~~v~Pf  248 (248)
                      .+++.    .++ +++++||.
T Consensus       152 ~~~~~----~~~~~~~~vrpg  168 (242)
T 2bka_A          152 AKVEE----LKFDRYSVFRPG  168 (242)
T ss_dssp             HHHHT----TCCSEEEEEECC
T ss_pred             HHHHh----cCCCCeEEEcCc
Confidence            99876    467 59999984

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.91  E-value=1.8e-23  Score=191.94  Aligned_cols=163  Identities=12%  Similarity=0.090  Sum_probs=120.2

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccC-CCHHHH-HHHhhc-CCC
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL-GDAKAV-NKFFSE-NAF  146 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl-~~~~~~-~~~~~~-~~i  146 (248)
                      +|+++||||++|||++++++|+++|++|++.++  +..++..+.+++   .+.++..+.+|+ ++.+.+ +++.++ +++
T Consensus       322 gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~--~~~~~~~~~i~~---~g~~~~~~~~Dv~~~~~~~~~~~~~~~G~i  396 (604)
T 2et6_A          322 DKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDF--KDATKTVDEIKA---AGGEAWPDQHDVAKDSEAIIKNVIDKYGTI  396 (604)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHHTTCEEEEECS--SCCHHHHHHHHH---TTCEEEEECCCHHHHHHHHHHHHHHHHSCC
T ss_pred             CCeEEEECcchHHHHHHHHHHHHCCCEEEEEeC--ccHHHHHHHHHh---cCCeEEEEEcChHHHHHHHHHHHHHhcCCC
Confidence            399999999999999999999999999999875  223333333332   245677788999 555443 233333 789


Q ss_pred             CEEEEcccccccCCCCCCchhhHh----hhHHH----HHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCCC
Q 025786          147 DAVMHFAAVAYVGESTLDPLKYYH----NITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPIN  218 (248)
Q Consensus       147 D~li~~Ag~~~~~~~~~~~~~~~~----~~~~~----~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~  218 (248)
                      |+||||||+.......+.+.+.|+    .|+.+    ++.++|.|++++.++||++||.+.+-           +.+...
T Consensus       397 DiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag~~-----------~~~~~~  465 (604)
T 2et6_A          397 DILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIY-----------GNFGQA  465 (604)
T ss_dssp             CEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHS-----------CCTTBH
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhcc-----------CCCCCh
Confidence            999999998755444444444444    44444    45588888887778999999977652           233467


Q ss_pred             hHHHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          219 PYGKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       219 ~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                      .|++||++...|++.++.|   +||++++|.|.
T Consensus       466 ~Y~asKaal~~lt~~la~El~~~gIrVn~v~PG  498 (604)
T 2et6_A          466 NYSSSKAGILGLSKTMAIEGAKNNIKVNIVAPH  498 (604)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred             hHHHHHHHHHHHHHHHHHHhCccCeEEEEEcCC
Confidence            8999999999999999988   58999999993

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=99.91  E-value=5e-24  Score=176.96  Aligned_cols=152  Identities=22%  Similarity=0.218  Sum_probs=124.1

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li  150 (248)
                      |+|+||||+|+||++++++|+ +|++|++++|+...        .     . +   +.+|++|.+++.++++..++|+||
T Consensus         1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~~--------~-----~-~---~~~Dl~~~~~~~~~~~~~~~d~vi   62 (273)
T 2ggs_A            1 MRTLITGASGQLGIELSRLLS-ERHEVIKVYNSSEI--------Q-----G-G---YKLDLTDFPRLEDFIIKKRPDVII   62 (273)
T ss_dssp             CCEEEETTTSHHHHHHHHHHT-TTSCEEEEESSSCC--------T-----T-C---EECCTTSHHHHHHHHHHHCCSEEE
T ss_pred             CEEEEECCCChhHHHHHHHHh-cCCeEEEecCCCcC--------C-----C-C---ceeccCCHHHHHHHHHhcCCCEEE
Confidence            469999999999999999999 58999999975421        0     1 1   789999999999998754699999


Q ss_pred             EcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCCChHHHHHHHHHHH
Q 025786          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDI  230 (248)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e~l  230 (248)
                      ||||.........+.+..++.|..++.++++++.+.+. +||++||..+|+.... +++|+.+..|.+.|+.||.++|.+
T Consensus        63 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~iv~~SS~~~~~~~~~-~~~e~~~~~~~~~Y~~sK~~~e~~  140 (273)
T 2ggs_A           63 NAAAMTDVDKCEIEKEKAYKINAEAVRHIVRAGKVIDS-YIVHISTDYVFDGEKG-NYKEEDIPNPINYYGLSKLLGETF  140 (273)
T ss_dssp             ECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTC-EEEEEEEGGGSCSSSC-SBCTTSCCCCSSHHHHHHHHHHHH
T ss_pred             ECCcccChhhhhhCHHHHHHHhHHHHHHHHHHHHHhCC-eEEEEecceeEcCCCC-CcCCCCCCCCCCHHHHHHHHHHHH
Confidence            99997543222345667788899999999999988775 9999999999975543 788888888899999999999999


Q ss_pred             HHHHhhcCCCcEEEEecC
Q 025786          231 ILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       231 ~~~~~~~~gi~~~~v~Pf  248 (248)
                      ++.      ++++++||.
T Consensus       141 ~~~------~~~~~iR~~  152 (273)
T 2ggs_A          141 ALQ------DDSLIIRTS  152 (273)
T ss_dssp             HCC------TTCEEEEEC
T ss_pred             HhC------CCeEEEecc
Confidence            876      566788873

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=99.91  E-value=3.4e-24  Score=175.95  Aligned_cols=157  Identities=17%  Similarity=0.164  Sum_probs=103.6

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHH---HHhhc-CC
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVN---KFFSE-NA  145 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~---~~~~~-~~  145 (248)
                      +|++|||||+||||++++++|++ |++|++++|+..   ...+. .+    ..++.++.+|+++.++..   +.+++ ++
T Consensus         5 ~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~---~~~~~-~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   75 (245)
T 3e9n_A            5 KKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPE---HLAAL-AE----IEGVEPIESDIVKEVLEEGGVDKLKNLDH   75 (245)
T ss_dssp             -CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHH---HHHHH-HT----STTEEEEECCHHHHHHTSSSCGGGTTCSC
T ss_pred             CCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHH---HHHHH-Hh----hcCCcceecccchHHHHHHHHHHHHhcCC
Confidence            38999999999999999999987 999999986432   22221 11    236888999999876522   22222 58


Q ss_pred             CCEEEEcccccccCCCCCCchh----hHhhhHHH----HHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYVGESTLDPLK----YYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (248)
Q Consensus       146 iD~li~~Ag~~~~~~~~~~~~~----~~~~~~~~----~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (248)
                      +|+||||||+.......+.+.+    .++.|+.+    ++.+++.|++.+ ++||++||..++.           +.++.
T Consensus        76 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-g~iv~isS~~~~~-----------~~~~~  143 (245)
T 3e9n_A           76 VDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAAS-GCVIYINSGAGNG-----------PHPGN  143 (245)
T ss_dssp             CSEEEECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEC---------------------C
T ss_pred             CCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEcCccccc-----------CCCCc
Confidence            9999999998755444333333    34455555    444666676665 7999999988763           34457


Q ss_pred             ChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          218 NPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      ..|+.||++.+.+++.++.+   .|+++++++|
T Consensus       144 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~P  176 (245)
T 3e9n_A          144 TIYAASKHALRGLADAFRKEEANNGIRVSTVSP  176 (245)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEE
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEec
Confidence            78999999999999999987   5899999998

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.91  E-value=4.3e-24  Score=171.89  Aligned_cols=154  Identities=10%  Similarity=0.068  Sum_probs=110.9

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li  150 (248)
                      |+|+||||||+||++++++|+++|++|++++|+..+   .    ..+.   .++.++.+|++|.++  +.+.  ++|+||
T Consensus         1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~---~----~~~~---~~~~~~~~D~~d~~~--~~~~--~~d~vi   66 (221)
T 3ew7_A            1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGK---I----TQTH---KDINILQKDIFDLTL--SDLS--DQNVVV   66 (221)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHH---H----HHHC---SSSEEEECCGGGCCH--HHHT--TCSEEE
T ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchh---h----hhcc---CCCeEEeccccChhh--hhhc--CCCEEE
Confidence            469999999999999999999999999999975322   1    1121   468899999999887  5554  689999


Q ss_pred             EcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecC-CCCCCCCCCCCCCCCCChHHHHHHHHHH
Q 025786          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYG-EPEKMPITEETPQAPINPYGKAKKMAED  229 (248)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g-~~~~~~~~e~~~~~~~~~Y~~sK~a~e~  229 (248)
                      ||||....         ....+..++.+++++|++.+.+++|++||.+++. .....+..|+.+..|.+.|+.+|.+.|.
T Consensus        67 ~~ag~~~~---------~~~~~~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~~k~~~e~  137 (221)
T 3ew7_A           67 DAYGISPD---------EAEKHVTSLDHLISVLNGTVSPRLLVVGGAASLQIDEDGNTLLESKGLREAPYYPTARAQAKQ  137 (221)
T ss_dssp             ECCCSSTT---------TTTSHHHHHHHHHHHHCSCCSSEEEEECCCC-------------------CCCSCCHHHHHHH
T ss_pred             ECCcCCcc---------ccchHHHHHHHHHHHHHhcCCceEEEEecceEEEcCCCCccccccCCCCCHHHHHHHHHHHHH
Confidence            99997321         2345778899999999988888999999987653 3333355666677778889999999999


Q ss_pred             HHHHHhh-cCCCcEEEEecC
Q 025786          230 IILDFSK-NSDMAVLQCHRF  248 (248)
Q Consensus       230 l~~~~~~-~~gi~~~~v~Pf  248 (248)
                      + ..+.. +.|++++++||.
T Consensus       138 ~-~~~~~~~~gi~~~ivrp~  156 (221)
T 3ew7_A          138 L-EHLKSHQAEFSWTYISPS  156 (221)
T ss_dssp             H-HHHHTTTTTSCEEEEECS
T ss_pred             H-HHHHhhccCccEEEEeCc
Confidence            7 44554 789999999994

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=99.91  E-value=1.2e-23  Score=172.68  Aligned_cols=158  Identities=13%  Similarity=0.125  Sum_probs=109.7

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEE-e--cCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHH-HHhhc-C
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIV-D--NLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVN-KFFSE-N  144 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~-~--r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~-~~~~~-~  144 (248)
                      +|+++||||+||||++++++|+++|++|+++ +  |+..   .+.+..+++  .  ...+.  |..+.+.+. ++.+. +
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~---~~~~~~~~~--~--~~~~~--~~~~v~~~~~~~~~~~g   71 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAA---ERQRFESEN--P--GTIAL--AEQKPERLVDATLQHGE   71 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHH---HHHHHHHHS--T--TEEEC--CCCCGGGHHHHHGGGSS
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHH---HHHHHHHHh--C--CCccc--CHHHHHHHHHHHHHHcC
Confidence            3899999999999999999999999999998 5  6432   222222222  1  12211  443333332 22222 6


Q ss_pred             CCCEEEEccccccc---CCCCCCchh----hHhhhHHHHH----HHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCC
Q 025786          145 AFDAVMHFAAVAYV---GESTLDPLK----YYHNITSNTL----VVLESMARHGVDTLIYSSTCATYGEPEKMPITEETP  213 (248)
Q Consensus       145 ~iD~li~~Ag~~~~---~~~~~~~~~----~~~~~~~~~~----~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~  213 (248)
                      ++|+||||||+...   .+..+.+.+    .++.|+.++.    .+++.|++++.++||++||..++.           +
T Consensus        72 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~-----------~  140 (244)
T 1zmo_A           72 AIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGKK-----------P  140 (244)
T ss_dssp             CEEEEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTS-----------C
T ss_pred             CCCEEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhCC-----------C
Confidence            89999999998654   343333333    3445555543    466777777778999999987763           3


Q ss_pred             CCCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          214 QAPINPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       214 ~~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      .++...|+.||++.+.+++.++.+   +|+++++|+|
T Consensus       141 ~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~P  177 (244)
T 1zmo_A          141 LAYNPLYGPARAATVALVESAAKTLSRDGILLYAIGP  177 (244)
T ss_dssp             CTTCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEee
Confidence            345678999999999999999987   4899999998

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=99.91  E-value=1.7e-23  Score=175.09  Aligned_cols=146  Identities=16%  Similarity=0.169  Sum_probs=119.3

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~l  149 (248)
                      ||+|+|||| |+||++++++|+++|++|++++|+..+..    .+.     ..++.++.+|++|.+     ++  ++|+|
T Consensus         5 ~~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~----~~~-----~~~~~~~~~D~~d~~-----~~--~~d~v   67 (286)
T 3ius_A            5 TGTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQME----AIR-----ASGAEPLLWPGEEPS-----LD--GVTHL   67 (286)
T ss_dssp             CCEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHH----HHH-----HTTEEEEESSSSCCC-----CT--TCCEE
T ss_pred             cCcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhh----hHh-----hCCCeEEEecccccc-----cC--CCCEE
Confidence            489999998 99999999999999999999997543221    111     136889999999844     33  78999


Q ss_pred             EEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHH--cCCCEEEEeccceecCCCCCCCCCCCCCCCCCChHHHHHHHH
Q 025786          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMAR--HGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMA  227 (248)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~--~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~  227 (248)
                      ||+|+.....    .         ..+.++++++.+  .+.++||++||.++||.....+++|+.+..|.+.|+.+|.++
T Consensus        68 i~~a~~~~~~----~---------~~~~~l~~a~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~  134 (286)
T 3ius_A           68 LISTAPDSGG----D---------PVLAALGDQIAARAAQFRWVGYLSTTAVYGDHDGAWVDETTPLTPTAARGRWRVMA  134 (286)
T ss_dssp             EECCCCBTTB----C---------HHHHHHHHHHHHTGGGCSEEEEEEEGGGGCCCTTCEECTTSCCCCCSHHHHHHHHH
T ss_pred             EECCCccccc----c---------HHHHHHHHHHHhhcCCceEEEEeecceecCCCCCCCcCCCCCCCCCCHHHHHHHHH
Confidence            9999965321    1         124678888887  667899999999999988777899999999999999999999


Q ss_pred             HHHHHHHhhcCCCcEEEEecC
Q 025786          228 EDIILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       228 e~l~~~~~~~~gi~~~~v~Pf  248 (248)
                      |++++.+   .+++++++||+
T Consensus       135 E~~~~~~---~~~~~~ilRp~  152 (286)
T 3ius_A          135 EQQWQAV---PNLPLHVFRLA  152 (286)
T ss_dssp             HHHHHHS---TTCCEEEEEEC
T ss_pred             HHHHHhh---cCCCEEEEecc
Confidence            9999887   69999999985

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=99.90  E-value=4.8e-23  Score=183.28  Aligned_cols=161  Identities=14%  Similarity=0.048  Sum_probs=123.5

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~  144 (248)
                      +|++|||||+||||+++++.|+++|++|++++|... .+...+..++.     .+.++.+|++|.+++++++++     +
T Consensus       213 gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~-~~~l~~~~~~~-----~~~~~~~Dvtd~~~v~~~~~~~~~~~g  286 (454)
T 3u0b_A          213 GKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGA-AEDLKRVADKV-----GGTALTLDVTADDAVDKITAHVTEHHG  286 (454)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGG-HHHHHHHHHHH-----TCEEEECCTTSTTHHHHHHHHHHHHST
T ss_pred             CCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCcc-HHHHHHHHHHc-----CCeEEEEecCCHHHHHHHHHHHHHHcC
Confidence            399999999999999999999999999999986421 22222333332     356899999999999888875     3


Q ss_pred             -CCCEEEEcccccccCCCCCCch----hhHhhhHHHHHHHHHHHHHc----CCCEEEEeccceecCCCCCCCCCCCCCCC
Q 025786          145 -AFDAVMHFAAVAYVGESTLDPL----KYYHNITSNTLVVLESMARH----GVDTLIYSSTCATYGEPEKMPITEETPQA  215 (248)
Q Consensus       145 -~iD~li~~Ag~~~~~~~~~~~~----~~~~~~~~~~~~ll~~~~~~----~~~~iV~~SS~~~~g~~~~~~~~e~~~~~  215 (248)
                       ++|+||||||+.......+.+.    ..++.|+.++.++.+.+...    +.++||++||.+.+.           +.+
T Consensus       287 ~~id~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~~-----------g~~  355 (454)
T 3u0b_A          287 GKVDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIA-----------GNR  355 (454)
T ss_dssp             TCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHHH-----------CCT
T ss_pred             CCceEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhCC-----------CCC
Confidence             4999999999876544333333    34556666777777766554    568999999987752           234


Q ss_pred             CCChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          216 PINPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      .+..|+.||++.+.|++.++.+   .|+++++|+|
T Consensus       356 g~~~YaasKaal~~l~~~la~e~~~~gI~vn~v~P  390 (454)
T 3u0b_A          356 GQTNYATTKAGMIGLAEALAPVLADKGITINAVAP  390 (454)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEE
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEc
Confidence            4778999999999999999977   5899999998

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.90  E-value=3.1e-23  Score=190.44  Aligned_cols=164  Identities=16%  Similarity=0.133  Sum_probs=116.5

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCC------CCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS------RGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-  143 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~------~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-  143 (248)
                      |+++||||++|||++++++|+++|++|++.++..      ++.+.+.+..+++...+.++.   +|++|.+++++++++ 
T Consensus         9 kvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~~---~d~~d~~~~~~~v~~~   85 (604)
T 2et6_A            9 KVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVAV---ADYNNVLDGDKIVETA   85 (604)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTCEEE---EECCCTTCHHHHHHHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCCeEE---EEcCCHHHHHHHHHHH
Confidence            9999999999999999999999999999988643      111233333333322233333   466665544444432 


Q ss_pred             ----CCCCEEEEcccccccCCCCCCchhhHh----hhHHH----HHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCC
Q 025786          144 ----NAFDAVMHFAAVAYVGESTLDPLKYYH----NITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEE  211 (248)
Q Consensus       144 ----~~iD~li~~Ag~~~~~~~~~~~~~~~~----~~~~~----~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~  211 (248)
                          +++|+||||||+.......+.+.+.|+    .|+.+    ++.++|.|++++.++||++||.+++-          
T Consensus        86 ~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ag~~----------  155 (604)
T 2et6_A           86 VKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLY----------  155 (604)
T ss_dssp             HHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH----------
T ss_pred             HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcC----------
Confidence                789999999998655444444444444    44444    45588899888778999999976641          


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          212 TPQAPINPYGKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       212 ~~~~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                       +.+....|++||++...|++.++.|   +||++++|.|.
T Consensus       156 -~~~~~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg  194 (604)
T 2et6_A          156 -GNFGQANYASAKSALLGFAETLAKEGAKYNIKANAIAPL  194 (604)
T ss_dssp             -CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred             -CCCCchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEccC
Confidence             2234668999999999999999988   58999999994

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.90  E-value=4.9e-23  Score=184.55  Aligned_cols=165  Identities=21%  Similarity=0.177  Sum_probs=131.0

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC-EEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~----~~  145 (248)
                      +++|||||+||||+++++.|+++|+ +|++++|+....+...+..+++...+.++.++.+|++|.+++.+++++    ++
T Consensus       240 ~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~g~  319 (496)
T 3mje_A          240 GSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLAELPEDAP  319 (496)
T ss_dssp             SEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTCCTTSC
T ss_pred             CEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHhCC
Confidence            8999999999999999999999999 788888765444444444444444456899999999999999999876    57


Q ss_pred             CCEEEEccccc-ccCCCCCCc----hhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCCChH
Q 025786          146 FDAVMHFAAVA-YVGESTLDP----LKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPY  220 (248)
Q Consensus       146 iD~li~~Ag~~-~~~~~~~~~----~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y  220 (248)
                      +|+||||||+. ......+.+    ...+..|+.++.++.+.+.....++||++||.+.+-           ..+.+..|
T Consensus       320 ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~~~~~iV~~SS~a~~~-----------g~~g~~~Y  388 (496)
T 3mje_A          320 LTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADLDLDAFVLFSSGAAVW-----------GSGGQPGY  388 (496)
T ss_dssp             EEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTSCCSEEEEEEEHHHHT-----------TCTTCHHH
T ss_pred             CeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeChHhcC-----------CCCCcHHH
Confidence            99999999986 443333332    334567778888899999888888999999977652           23447789


Q ss_pred             HHHHHHHHHHHHHHhhcCCCcEEEEec
Q 025786          221 GKAKKMAEDIILDFSKNSDMAVLQCHR  247 (248)
Q Consensus       221 ~~sK~a~e~l~~~~~~~~gi~~~~v~P  247 (248)
                      +++|++.+.|+++++. .|+++++|+|
T Consensus       389 aAaKa~ldala~~~~~-~Gi~v~sV~p  414 (496)
T 3mje_A          389 AAANAYLDALAEHRRS-LGLTASSVAW  414 (496)
T ss_dssp             HHHHHHHHHHHHHHHH-TTCCCEEEEE
T ss_pred             HHHHHHHHHHHHHHHh-cCCeEEEEEC
Confidence            9999999999998765 6999999988

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=99.90  E-value=1.1e-23  Score=193.98  Aligned_cols=166  Identities=15%  Similarity=0.079  Sum_probs=115.2

Q ss_pred             CCCceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCC------CCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHH
Q 025786           67 EEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS------RGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKF  140 (248)
Q Consensus        67 ~~~~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~------~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~  140 (248)
                      ..+ |++|||||++|||+++|++|+++|++|++++|..      ++.+.+.+..+++......   ..+|++|.++++++
T Consensus        17 l~g-k~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~---~~~D~~d~~~~~~~   92 (613)
T 3oml_A           17 YDG-RVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGE---AVADYNSVIDGAKV   92 (613)
T ss_dssp             CTT-CEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTCC---EEECCCCGGGHHHH
T ss_pred             CCC-CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCCe---EEEEeCCHHHHHHH
Confidence            344 9999999999999999999999999999988621      1222233333333222222   24799999988888


Q ss_pred             hhc-----CCCCEEEEcccccccCCCCCCchhh----HhhhHHH----HHHHHHHHHHcCCCEEEEeccceecCCCCCCC
Q 025786          141 FSE-----NAFDAVMHFAAVAYVGESTLDPLKY----YHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMP  207 (248)
Q Consensus       141 ~~~-----~~iD~li~~Ag~~~~~~~~~~~~~~----~~~~~~~----~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~  207 (248)
                      +++     +++|+||||||+.......+.+.+.    ++.|+.+    ++.+++.|++++.++||++||.+++.      
T Consensus        93 ~~~~~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~isS~a~~~------  166 (613)
T 3oml_A           93 IETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIY------  166 (613)
T ss_dssp             HC----------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCHHHHH------
T ss_pred             HHHHHHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcC------
Confidence            875     5899999999987654443333333    3455555    34467777887778999999977652      


Q ss_pred             CCCCCCCCCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          208 ITEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       208 ~~e~~~~~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                           +.++...|++||++++.+++.++.+   +||++++|.|
T Consensus       167 -----~~~~~~~Y~asKaal~~lt~~la~e~~~~gI~vn~v~P  204 (613)
T 3oml_A          167 -----GNFGQVNYTAAKMGLIGLANTVAIEGARNNVLCNVIVP  204 (613)
T ss_dssp             -----CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE
T ss_pred             -----CCCCChHHHHHHHHHHHHHHHHHHHhCccCeEEEEEEC
Confidence                 2334678999999999999999988   4899999998

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.90  E-value=5.8e-23  Score=165.81  Aligned_cols=147  Identities=13%  Similarity=0.144  Sum_probs=112.8

Q ss_pred             ceEEEEecCCchhHHHHHHHHH-HCCCEEEEEecCCC-CcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCC
Q 025786           70 VTHVLVTGGAGYIGSHAALRLL-KDSYRVTIVDNLSR-GNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFD  147 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~-~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD  147 (248)
                      ||+|+||||+|+||++++++|+ ++|++|++++|+.. +.+.+    .   ....++.++.+|++|.+++.++++  ++|
T Consensus         5 mk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~----~---~~~~~~~~~~~D~~d~~~~~~~~~--~~d   75 (221)
T 3r6d_A            5 YXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPE----I---IDHERVTVIEGSFQNPGXLEQAVT--NAE   75 (221)
T ss_dssp             CSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHH----H---HTSTTEEEEECCTTCHHHHHHHHT--TCS
T ss_pred             EEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhh----c---cCCCceEEEECCCCCHHHHHHHHc--CCC
Confidence            4679999999999999999999 89999999997533 22111    1   113578999999999999999997  789


Q ss_pred             EEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCCC-hHHHHHHH
Q 025786          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPIN-PYGKAKKM  226 (248)
Q Consensus       148 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~-~Y~~sK~a  226 (248)
                      +||||||..               ++. +.++++.|++.+.++||++||..+|+..... ..+. ...... .|+.+|.+
T Consensus        76 ~vv~~ag~~---------------n~~-~~~~~~~~~~~~~~~iv~iSs~~~~~~~~~~-~~~~-~~~~~~~~y~~~K~~  137 (221)
T 3r6d_A           76 VVFVGAMES---------------GSD-MASIVKALSRXNIRRVIGVSMAGLSGEFPVA-LEKW-TFDNLPISYVQGERQ  137 (221)
T ss_dssp             EEEESCCCC---------------HHH-HHHHHHHHHHTTCCEEEEEEETTTTSCSCHH-HHHH-HHHTSCHHHHHHHHH
T ss_pred             EEEEcCCCC---------------Chh-HHHHHHHHHhcCCCeEEEEeeceecCCCCcc-cccc-cccccccHHHHHHHH
Confidence            999999843               223 8889999999888999999998887532210 0000 001123 79999999


Q ss_pred             HHHHHHHHhhcCCCcEEEEec
Q 025786          227 AEDIILDFSKNSDMAVLQCHR  247 (248)
Q Consensus       227 ~e~l~~~~~~~~gi~~~~v~P  247 (248)
                      +|.+++.    .|++++++||
T Consensus       138 ~e~~~~~----~~i~~~~vrp  154 (221)
T 3r6d_A          138 ARNVLRE----SNLNYTILRL  154 (221)
T ss_dssp             HHHHHHH----SCSEEEEEEE
T ss_pred             HHHHHHh----CCCCEEEEec
Confidence            9998864    7999999998

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.90  E-value=3.6e-23  Score=169.57  Aligned_cols=155  Identities=17%  Similarity=0.162  Sum_probs=118.0

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHC--CCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCC
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKD--SYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFD  147 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD  147 (248)
                      +|+|+||||+|+||++++++|+++  |++|++++|+..+   .    +.+   ..++.++.+|++|.+++.++++  ++|
T Consensus         4 ~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~---~----~~~---~~~~~~~~~D~~d~~~~~~~~~--~~d   71 (253)
T 1xq6_A            4 LPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQG---K----EKI---GGEADVFIGDITDADSINPAFQ--GID   71 (253)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHH---H----HHT---TCCTTEEECCTTSHHHHHHHHT--TCS
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCc---h----hhc---CCCeeEEEecCCCHHHHHHHHc--CCC
Confidence            489999999999999999999999  8999999874321   1    112   2357789999999999999997  689


Q ss_pred             EEEEcccccccCC------CC-------CCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCC
Q 025786          148 AVMHFAAVAYVGE------ST-------LDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQ  214 (248)
Q Consensus       148 ~li~~Ag~~~~~~------~~-------~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~  214 (248)
                      +||||||......      ..       +.....++.|+.++.++++++++.+.++||++||..++..        ..+.
T Consensus        72 ~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~~~--------~~~~  143 (253)
T 1xq6_A           72 ALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNP--------DHPL  143 (253)
T ss_dssp             EEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTCT--------TCGG
T ss_pred             EEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcCCCEEEEEcCccCCCC--------CCcc
Confidence            9999999753211      01       1112346788889999999999988889999999876521        1111


Q ss_pred             CC--CChHHHHHHHHHHHHHHHhhcCCCcEEEEecC
Q 025786          215 AP--INPYGKAKKMAEDIILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       215 ~~--~~~Y~~sK~a~e~l~~~~~~~~gi~~~~v~Pf  248 (248)
                      .+  ...|+.+|.++|.+++.    .|++++++||.
T Consensus       144 ~~~~~~~y~~sK~~~e~~~~~----~~i~~~~vrpg  175 (253)
T 1xq6_A          144 NKLGNGNILVWKRKAEQYLAD----SGTPYTIIRAG  175 (253)
T ss_dssp             GGGGGCCHHHHHHHHHHHHHT----SSSCEEEEEEC
T ss_pred             ccccchhHHHHHHHHHHHHHh----CCCceEEEecc
Confidence            11  13588899999998754    79999999984

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=99.90  E-value=1e-22  Score=175.97  Aligned_cols=168  Identities=12%  Similarity=-0.032  Sum_probs=118.1

Q ss_pred             CceEEEEecCCchhHHHHHHHHHH-CCCEEEEEecCCCCcchh---------hhhhhhhcCCCCceEEEEccCCCHHHHH
Q 025786           69 GVTHVLVTGGAGYIGSHAALRLLK-DSYRVTIVDNLSRGNIGA---------VKVLQELFPEPGRLQFIYADLGDAKAVN  138 (248)
Q Consensus        69 ~~k~vlITGasg~IG~~la~~L~~-~G~~V~~~~r~~~~~~~~---------~~~~~~~~~~~~~~~~~~~Dl~~~~~~~  138 (248)
                      ++|++|||||++|||+++++.|++ +|++|+++++.....+..         ....+.....+.++..+.+|++|.++++
T Consensus        46 ~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvtd~~~v~  125 (405)
T 3zu3_A           46 GPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFSDEIKQ  125 (405)
T ss_dssp             CCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHH
T ss_pred             CCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCCCHHHHH
Confidence            449999999999999999999999 999999998754432211         0111111122457888999999999998


Q ss_pred             HHhhc-----CCCCEEEEcccccc-------------cCCC---------------------CCCchhhHhhhHHH----
Q 025786          139 KFFSE-----NAFDAVMHFAAVAY-------------VGES---------------------TLDPLKYYHNITSN----  175 (248)
Q Consensus       139 ~~~~~-----~~iD~li~~Ag~~~-------------~~~~---------------------~~~~~~~~~~~~~~----  175 (248)
                      +++++     +++|+||||||...             ..+.                     .+.+++.|+..+..    
T Consensus       126 ~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v~Vn~~~  205 (405)
T 3zu3_A          126 LTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVAVMGGE  205 (405)
T ss_dssp             HHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSSH
T ss_pred             HHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHHHHhhchh
Confidence            88875     78999999999741             1122                     23344555544332    


Q ss_pred             HH-HHHHHHHH----cCCCEEEEeccceecCCCCCCCCCCCCCCCCC--ChHHHHHHHHHHHHHHHhhc---C-CCcEEE
Q 025786          176 TL-VVLESMAR----HGVDTLIYSSTCATYGEPEKMPITEETPQAPI--NPYGKAKKMAEDIILDFSKN---S-DMAVLQ  244 (248)
Q Consensus       176 ~~-~ll~~~~~----~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~--~~Y~~sK~a~e~l~~~~~~~---~-gi~~~~  244 (248)
                      .. .+...+..    .+.++||++||.+..-           +.+..  ..|++||++++.+++.++.+   + ||++++
T Consensus       206 ~~~~~~~~~~~~~m~~~gG~IVniSSi~~~~-----------~~p~~~~~aY~AaKaal~~ltrsLA~Ela~~~GIRVNa  274 (405)
T 3zu3_A          206 DWQMWIDALLDAGVLAEGAQTTAFTYLGEKI-----------THDIYWNGSIGAAKKDLDQKVLAIRESLAAHGGGDARV  274 (405)
T ss_dssp             HHHHHHHHHHHHTCEEEEEEEEEEECCCCGG-----------GTTTTTTSHHHHHHHHHHHHHHHHHHHHHTTTSCEEEE
T ss_pred             HHHHHHHHHHHHhhhhCCcEEEEEeCchhhC-----------cCCCccchHHHHHHHHHHHHHHHHHHHhCcccCeEEEE
Confidence            22 23333322    2247999999976641           22223  78999999999999999988   5 899999


Q ss_pred             Eec
Q 025786          245 CHR  247 (248)
Q Consensus       245 v~P  247 (248)
                      +.|
T Consensus       275 VaP  277 (405)
T 3zu3_A          275 SVL  277 (405)
T ss_dssp             EEC
T ss_pred             EEe
Confidence            998

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.90  E-value=1.3e-22  Score=182.92  Aligned_cols=166  Identities=17%  Similarity=0.172  Sum_probs=128.3

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCC-EEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~  148 (248)
                      .+++|||||+||||++++++|+++|+ +|++++|+........+..+++...+.++.++.+|++|.+++.++++++++|+
T Consensus       259 ~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~~~ld~  338 (511)
T 2z5l_A          259 SGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALVTAYPPNA  338 (511)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHHSCCSE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhcCCCcE
Confidence            48999999999999999999999999 68888876543333344444444445679999999999999999998778999


Q ss_pred             EEEcccccccCCCCCCc----hhhHhhhHHHHHHHHHHHHHc-CCCEEEEeccceecCCCCCCCCCCCCCCCCCChHHHH
Q 025786          149 VMHFAAVAYVGESTLDP----LKYYHNITSNTLVVLESMARH-GVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKA  223 (248)
Q Consensus       149 li~~Ag~~~~~~~~~~~----~~~~~~~~~~~~~ll~~~~~~-~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~s  223 (248)
                      ||||||+.......+.+    ...+..|+.++.++.+.+... +.++||++||.+.+.           .......|+.+
T Consensus       339 VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~~V~~SS~a~~~-----------g~~g~~~Yaaa  407 (511)
T 2z5l_A          339 VFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIKGLDAFVLFSSVTGTW-----------GNAGQGAYAAA  407 (511)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCTTCCCEEEEEEGGGTT-----------CCTTBHHHHHH
T ss_pred             EEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeCHHhcC-----------CCCCCHHHHHH
Confidence            99999986544333222    234456777788888877655 668999999976541           22336789999


Q ss_pred             HHHHHHHHHHHhhcCCCcEEEEec
Q 025786          224 KKMAEDIILDFSKNSDMAVLQCHR  247 (248)
Q Consensus       224 K~a~e~l~~~~~~~~gi~~~~v~P  247 (248)
                      |++.+.+++.+. ..|+++++|+|
T Consensus       408 Ka~ld~la~~~~-~~gi~v~sv~p  430 (511)
T 2z5l_A          408 NAALDALAERRR-AAGLPATSVAW  430 (511)
T ss_dssp             HHHHHHHHHHHH-TTTCCCEEEEE
T ss_pred             HHHHHHHHHHHH-HcCCcEEEEEC
Confidence            999999999875 46999999987

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=99.89  E-value=2.9e-23  Score=187.46  Aligned_cols=171  Identities=20%  Similarity=0.221  Sum_probs=128.3

Q ss_pred             CceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhh---hhhhhc------CCCCceEEEEccCCCHHHHHH
Q 025786           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVK---VLQELF------PEPGRLQFIYADLGDAKAVNK  139 (248)
Q Consensus        69 ~~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~---~~~~~~------~~~~~~~~~~~Dl~~~~~~~~  139 (248)
                      .+|+||||||||+||++++++|.++|++|++++|.........+   .++...      ....++.++.+|+++.+++. 
T Consensus       149 ~~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~-  227 (508)
T 4f6l_B          149 PLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV-  227 (508)
T ss_dssp             CCEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC-
T ss_pred             CCCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC-
Confidence            35899999999999999999999999999999986543222111   111110      11357999999999987776 


Q ss_pred             HhhcCCCCEEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCC-----CCCCCCCCCCC-
Q 025786          140 FFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGE-----PEKMPITEETP-  213 (248)
Q Consensus       140 ~~~~~~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~-----~~~~~~~e~~~-  213 (248)
                      .  ..++|+||||||...   ........+..|+.++.++++++.+ +.++|||+||.++ |.     ....+++|+.+ 
T Consensus       228 ~--~~~~D~Vih~Aa~~~---~~~~~~~~~~~Nv~gt~~ll~~a~~-~~~~~v~iSS~~v-G~~~~~~~~~~~~~E~~~~  300 (508)
T 4f6l_B          228 L--PENMDTIIHAGARTD---HFGDDDEFEKVNVQGTVDVIRLAQQ-HHARLIYVSTISV-GTYFDIDTEDVTFSEADVY  300 (508)
T ss_dssp             C--SSCCSEEEECCCC-----------CCHHHHHHHHHHHHHHHHT-TTCEEEEEEESCT-TSEECTTCSCCEECTTCSC
T ss_pred             C--ccCCCEEEECCceec---CCCCHHHHhhhHHHHHHHHHHHHHh-CCCcEEEeCChhh-ccCCccCCcCccccccccc
Confidence            2  247999999999753   2334566788899999999999988 6689999999888 43     23345677766 


Q ss_pred             --CCCCChHHHHHHHHHHHHHHHhhcCCCcEEEEecC
Q 025786          214 --QAPINPYGKAKKMAEDIILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       214 --~~~~~~Y~~sK~a~e~l~~~~~~~~gi~~~~v~Pf  248 (248)
                        ..+.+.|+.||.++|.+++.+++ .|++++++||.
T Consensus       301 ~~~~~~~~Y~~sK~~~E~~~~~~~~-~gi~~~ilRp~  336 (508)
T 4f6l_B          301 KGQLLTSPYTRSKFYSELKVLEAVN-NGLDGRIVRVG  336 (508)
T ss_dssp             SSBCCCSHHHHHHHHHHHHHHHHHH-TTCEEEEEEEC
T ss_pred             ccccCCCcHHHHHHHHHHHHHHHHH-cCCCEEEEecc
Confidence              34678999999999999999865 69999999984

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=99.89  E-value=3.8e-22  Score=172.17  Aligned_cols=159  Identities=19%  Similarity=0.227  Sum_probs=130.8

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCC-----CEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDS-----YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G-----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~  145 (248)
                      |+||||||||+||++++++|+++|     ++|++++|......        .  ...++.++.+|++|.+++.++++..+
T Consensus         2 ~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~--------~--~~~~~~~~~~Dl~d~~~~~~~~~~~~   71 (364)
T 2v6g_A            2 SVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW--------H--EDNPINYVQCDISDPDDSQAKLSPLT   71 (364)
T ss_dssp             EEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC--------C--CSSCCEEEECCTTSHHHHHHHHTTCT
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc--------c--ccCceEEEEeecCCHHHHHHHHhcCC
Confidence            789999999999999999999999     99999998654321        0  12468889999999999999987533


Q ss_pred             -CCEEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHc--CCCEEE-------EeccceecCCC--CCCCCCCCCC
Q 025786          146 -FDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARH--GVDTLI-------YSSTCATYGEP--EKMPITEETP  213 (248)
Q Consensus       146 -iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~--~~~~iV-------~~SS~~~~g~~--~~~~~~e~~~  213 (248)
                       +|+|||+||...     .++.+.++.|..++.++++++.+.  +.+++|       ++||.++||..  ...+++|+.+
T Consensus        72 ~~d~vih~a~~~~-----~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~~g~~i~~Ss~~vyg~~~~~~~~~~E~~~  146 (364)
T 2v6g_A           72 DVTHVFYVTWANR-----STEQENCEANSKMFRNVLDAVIPNCPNLKHISLQTGRKHYMGPFESYGKIESHDPPYTEDLP  146 (364)
T ss_dssp             TCCEEEECCCCCC-----SSHHHHHHHHHHHHHHHHHHHTTTCTTCCEEEEECCTHHHHCCGGGTTTSCCCCSSBCTTSC
T ss_pred             CCCEEEECCCCCc-----chHHHHHHHhHHHHHHHHHHHHHhccccceEEeccCceEEEechhhccccccCCCCCCcccc
Confidence             999999999652     356778889999999999999887  678887       79999999864  3457788877


Q ss_pred             CCC-CChHHHHHHHHHHHHHHHhhcCC-CcEEEEecC
Q 025786          214 QAP-INPYGKAKKMAEDIILDFSKNSD-MAVLQCHRF  248 (248)
Q Consensus       214 ~~~-~~~Y~~sK~a~e~l~~~~~~~~g-i~~~~v~Pf  248 (248)
                      ..+ .+.|    .++|++++.++++++ ++++++||+
T Consensus       147 ~~~~~~~y----~~~E~~~~~~~~~~~~~~~~ilRp~  179 (364)
T 2v6g_A          147 RLKYMNFY----YDLEDIMLEEVEKKEGLTWSVHRPG  179 (364)
T ss_dssp             CCSSCCHH----HHHHHHHHHHHTTSTTCEEEEEEES
T ss_pred             CCccchhh----HHHHHHHHHHhhcCCCceEEEECCC
Confidence            654 6678    458999999888887 999999985

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.89  E-value=2.9e-22  Score=179.72  Aligned_cols=166  Identities=17%  Similarity=0.158  Sum_probs=128.4

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCE-EEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc----C
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYR-VTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----N  144 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~----~  144 (248)
                      .+++|||||+||||+++++.|+++|++ |++++|+........+..+++...+.++.++.+|++|.+++.+++++    +
T Consensus       226 ~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i~~~g  305 (486)
T 2fr1_A          226 TGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDDV  305 (486)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTTS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHHHhcC
Confidence            489999999999999999999999995 88998865433333333333333356789999999999999999875    4


Q ss_pred             CCCEEEEcccccccCCCCCC----chhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCCChH
Q 025786          145 AFDAVMHFAAVAYVGESTLD----PLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPY  220 (248)
Q Consensus       145 ~iD~li~~Ag~~~~~~~~~~----~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y  220 (248)
                      ++|+||||||+.......+.    ....+..|+.++.++.+.+.+.+.++||++||.+.+.           ..+....|
T Consensus       306 ~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~V~~SS~a~~~-----------g~~g~~~Y  374 (486)
T 2fr1_A          306 PLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAF-----------GAPGLGGY  374 (486)
T ss_dssp             CEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHT-----------CCTTCTTT
T ss_pred             CCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcChHhcC-----------CCCCCHHH
Confidence            68999999998654332222    2334556788899999998887788999999976642           12336789


Q ss_pred             HHHHHHHHHHHHHHhhcCCCcEEEEec
Q 025786          221 GKAKKMAEDIILDFSKNSDMAVLQCHR  247 (248)
Q Consensus       221 ~~sK~a~e~l~~~~~~~~gi~~~~v~P  247 (248)
                      +.+|.+.+.+.+.++. .|+++++|+|
T Consensus       375 aaaka~l~~la~~~~~-~gi~v~~i~p  400 (486)
T 2fr1_A          375 APGNAYLDGLAQQRRS-DGLPATAVAW  400 (486)
T ss_dssp             HHHHHHHHHHHHHHHH-TTCCCEEEEE
T ss_pred             HHHHHHHHHHHHHHHh-cCCeEEEEEC
Confidence            9999999999988765 5999999997

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.89  E-value=3.4e-22  Score=163.11  Aligned_cols=146  Identities=19%  Similarity=0.229  Sum_probs=103.0

Q ss_pred             CceEEEEecCCchhHHHHHHHHHHCC-CEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCC
Q 025786           69 GVTHVLVTGGAGYIGSHAALRLLKDS-YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFD  147 (248)
Q Consensus        69 ~~k~vlITGasg~IG~~la~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD  147 (248)
                      .||+||||||+|+||++++++|+++| ++|++++|+..+...       .  ...++.++++|++|.+++.++++  ++|
T Consensus        22 ~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~-------~--~~~~~~~~~~Dl~d~~~~~~~~~--~~D   90 (236)
T 3qvo_A           22 HMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHK-------P--YPTNSQIIMGDVLNHAALKQAMQ--GQD   90 (236)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCS-------S--CCTTEEEEECCTTCHHHHHHHHT--TCS
T ss_pred             cccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcc-------c--ccCCcEEEEecCCCHHHHHHHhc--CCC
Confidence            35899999999999999999999999 899999975433221       1  12468899999999999999998  689


Q ss_pred             EEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCCCCC--CCCCCCCCCCChHHHHHH
Q 025786          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMP--ITEETPQAPINPYGKAKK  225 (248)
Q Consensus       148 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~--~~e~~~~~~~~~Y~~sK~  225 (248)
                      +||||||...              ....+.++++.|++.+.++||++||..+|+......  ..+.....+...|..+  
T Consensus        91 ~vv~~a~~~~--------------~~~~~~~~~~~~~~~~~~~iV~iSS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  154 (236)
T 3qvo_A           91 IVYANLTGED--------------LDIQANSVIAAMKACDVKRLIFVLSLGIYDEVPGKFVEWNNAVIGEPLKPFRRA--  154 (236)
T ss_dssp             EEEEECCSTT--------------HHHHHHHHHHHHHHTTCCEEEEECCCCC----------------CGGGHHHHHH--
T ss_pred             EEEEcCCCCc--------------hhHHHHHHHHHHHHcCCCEEEEEecceecCCCCcccccchhhcccchHHHHHHH--
Confidence            9999998411              112466899999999889999999999987543322  2222223333445444  


Q ss_pred             HHHHHHHHHhhcCCCcEEEEec
Q 025786          226 MAEDIILDFSKNSDMAVLQCHR  247 (248)
Q Consensus       226 a~e~l~~~~~~~~gi~~~~v~P  247 (248)
                        +..+    ++.|++++++||
T Consensus       155 --~~~l----~~~gi~~~~vrP  170 (236)
T 3qvo_A          155 --ADAI----EASGLEYTILRP  170 (236)
T ss_dssp             --HHHH----HTSCSEEEEEEE
T ss_pred             --HHHH----HHCCCCEEEEeC
Confidence              3332    357999999998

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=99.88  E-value=3.1e-22  Score=181.00  Aligned_cols=167  Identities=17%  Similarity=0.164  Sum_probs=124.8

Q ss_pred             CceEEEEecCCchhHHHHHHHHHHCCCE-EEEE-ecCCCC----------cchhhhhhhhhcCCCCceEEEEccCCCHHH
Q 025786           69 GVTHVLVTGGAGYIGSHAALRLLKDSYR-VTIV-DNLSRG----------NIGAVKVLQELFPEPGRLQFIYADLGDAKA  136 (248)
Q Consensus        69 ~~k~vlITGasg~IG~~la~~L~~~G~~-V~~~-~r~~~~----------~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~  136 (248)
                      ..+++|||||+||||.++++.|+++|++ |+++ +|+...          .+...+..+++...+.++.++.+|++|.++
T Consensus       250 ~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~  329 (525)
T 3qp9_A          250 ADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTDAEA  329 (525)
T ss_dssp             TTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTSHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCCHHH
Confidence            3489999999999999999999999997 6666 776422          223333333333335689999999999999


Q ss_pred             HHHHhhc----CCCCEEEEcccccccCCCCCCch----hhHhhhHHHHHHHHHHHHHcC-----CCEEEEeccceecCCC
Q 025786          137 VNKFFSE----NAFDAVMHFAAVAYVGESTLDPL----KYYHNITSNTLVVLESMARHG-----VDTLIYSSTCATYGEP  203 (248)
Q Consensus       137 ~~~~~~~----~~iD~li~~Ag~~~~~~~~~~~~----~~~~~~~~~~~~ll~~~~~~~-----~~~iV~~SS~~~~g~~  203 (248)
                      +.+++++    +++|+||||||+.......+.+.    ..+..|+.++.++.+.+....     .++||++||.+.+-  
T Consensus       330 v~~~~~~i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a~~~--  407 (525)
T 3qp9_A          330 AARLLAGVSDAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAAIW--  407 (525)
T ss_dssp             HHHHHHTSCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGGGTT--
T ss_pred             HHHHHHHHHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCHHHcC--
Confidence            9999986    57999999999876554433333    345567777777777766544     68999999987752  


Q ss_pred             CCCCCCCCCCCCCCChHHHHHHHHHHHHHHHhhcCCCcEEEEec
Q 025786          204 EKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVLQCHR  247 (248)
Q Consensus       204 ~~~~~~e~~~~~~~~~Y~~sK~a~e~l~~~~~~~~gi~~~~v~P  247 (248)
                               +.+.+..|+++|++.+.|+++++. .|+++++|+|
T Consensus       408 ---------g~~g~~~YaaaKa~l~~lA~~~~~-~gi~v~sI~p  441 (525)
T 3qp9_A          408 ---------GGAGQGAYAAGTAFLDALAGQHRA-DGPTVTSVAW  441 (525)
T ss_dssp             ---------CCTTCHHHHHHHHHHHHHHTSCCS-SCCEEEEEEE
T ss_pred             ---------CCCCCHHHHHHHHHHHHHHHHHHh-CCCCEEEEEC
Confidence                     234477899999999999877654 5999999988

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=99.88  E-value=1.5e-22  Score=176.28  Aligned_cols=167  Identities=11%  Similarity=-0.063  Sum_probs=116.4

Q ss_pred             ceEEEEecCCchhHHHHHHHHHH-CCCEEEEEecCCCCcchh---------hhhhhhhcCCCCceEEEEccCCCHHHHHH
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLK-DSYRVTIVDNLSRGNIGA---------VKVLQELFPEPGRLQFIYADLGDAKAVNK  139 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~-~G~~V~~~~r~~~~~~~~---------~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~  139 (248)
                      +|++|||||++|||+++++.|++ +|++|++++|.....+..         ....+.+...+.++..+.+|++|.+++++
T Consensus        61 gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvtd~~~v~~  140 (422)
T 3s8m_A           61 PKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAFSDAARAQ  140 (422)
T ss_dssp             CSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHHH
T ss_pred             CCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCCCHHHHHH
Confidence            49999999999999999999999 999999998765443321         00111122224578889999999999888


Q ss_pred             Hhhc------CCCCEEEEccccc-------------ccCCC---------------------CCCchhhHhhhHHH----
Q 025786          140 FFSE------NAFDAVMHFAAVA-------------YVGES---------------------TLDPLKYYHNITSN----  175 (248)
Q Consensus       140 ~~~~------~~iD~li~~Ag~~-------------~~~~~---------------------~~~~~~~~~~~~~~----  175 (248)
                      ++++      +++|+||||||..             ...+.                     .+.+++.|+..+..    
T Consensus       141 ~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~v~Vn~~~  220 (422)
T 3s8m_A          141 VIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITVMGGQ  220 (422)
T ss_dssp             HHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSSH
T ss_pred             HHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHHHHhhchh
Confidence            7764      6899999999872             11121                     12344445443322    


Q ss_pred             HH-HHHHHHHHc----CCCEEEEeccceecCCCCCCCCCCCCCCCC--CChHHHHHHHHHHHHHHHhhc---CCCcEEEE
Q 025786          176 TL-VVLESMARH----GVDTLIYSSTCATYGEPEKMPITEETPQAP--INPYGKAKKMAEDIILDFSKN---SDMAVLQC  245 (248)
Q Consensus       176 ~~-~ll~~~~~~----~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~--~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v  245 (248)
                      .. .+...+...    +.++||++||.+..-           +.+.  ...|++||++++.+++.++.|   +||++++|
T Consensus       221 ~~~~~~~a~~~~~m~~~gG~IVniSSi~g~~-----------~~p~~~~~aY~ASKaAl~~lTrsLA~Ela~~GIRVNaV  289 (422)
T 3s8m_A          221 DWELWIDALEGAGVLADGARSVAFSYIGTEI-----------TWPIYWHGALGKAKVDLDRTAQRLNARLAKHGGGANVA  289 (422)
T ss_dssp             HHHHHHHHHHHTTCEEEEEEEEEEEECCCGG-----------GHHHHTSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEE
T ss_pred             HHHHHHHHHHHHHHhhCCCEEEEEeCchhhc-----------cCCCccchHHHHHHHHHHHHHHHHHHHhCccCEEEEEE
Confidence            21 333433322    246899999976541           1111  368999999999999999988   68999999


Q ss_pred             ec
Q 025786          246 HR  247 (248)
Q Consensus       246 ~P  247 (248)
                      .|
T Consensus       290 aP  291 (422)
T 3s8m_A          290 VL  291 (422)
T ss_dssp             EE
T ss_pred             Ec
Confidence            98

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=99.88  E-value=4.6e-23  Score=176.43  Aligned_cols=166  Identities=9%  Similarity=-0.021  Sum_probs=113.1

Q ss_pred             eEEEEecCCc--hhHHHHHHHHHHCCCEEEEEecCC---------CCcchhhhhhhhhcCCCCceEEEEccCCCH--H--
Q 025786           71 THVLVTGGAG--YIGSHAALRLLKDSYRVTIVDNLS---------RGNIGAVKVLQELFPEPGRLQFIYADLGDA--K--  135 (248)
Q Consensus        71 k~vlITGasg--~IG~~la~~L~~~G~~V~~~~r~~---------~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~--~--  135 (248)
                      |+++||||++  |||+++|++|+++|++|+++++.+         .+.+...+...........+.++.+|+++.  +  
T Consensus         3 k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~   82 (329)
T 3lt0_A            3 DICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTANDI   82 (329)
T ss_dssp             CEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGGGC
T ss_pred             cEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchhhh
Confidence            8999999875  999999999999999999776432         111111111111111123477889999887  7  


Q ss_pred             ----------------HHHHHhhc-----CCCCEEEEcccccc--cCCCCCCch----hhHhhhHHHHHHHHHHHHHc--
Q 025786          136 ----------------AVNKFFSE-----NAFDAVMHFAAVAY--VGESTLDPL----KYYHNITSNTLVVLESMARH--  186 (248)
Q Consensus       136 ----------------~~~~~~~~-----~~iD~li~~Ag~~~--~~~~~~~~~----~~~~~~~~~~~~ll~~~~~~--  186 (248)
                                      ++.+++++     +++|+||||||+..  .....+.+.    ..++.|+.++..+...+...  
T Consensus        83 ~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~  162 (329)
T 3lt0_A           83 DEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIMK  162 (329)
T ss_dssp             CHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEE
T ss_pred             hhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHh
Confidence                            77777765     68999999999742  223222233    33445555555544444321  


Q ss_pred             CCCEEEEeccceecCCCCCCCCCCCCCCCCCC-hHHHHHHHHHHHHHHHhhc----CCCcEEEEec
Q 025786          187 GVDTLIYSSTCATYGEPEKMPITEETPQAPIN-PYGKAKKMAEDIILDFSKN----SDMAVLQCHR  247 (248)
Q Consensus       187 ~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~-~Y~~sK~a~e~l~~~~~~~----~gi~~~~v~P  247 (248)
                      ..++||++||.+.+.           +.+... .|+.||++.+.|++.++.+    +||++++|+|
T Consensus       163 ~~g~Iv~isS~~~~~-----------~~~~~~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~P  217 (329)
T 3lt0_A          163 PQSSIISLTYHASQK-----------VVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISA  217 (329)
T ss_dssp             EEEEEEEEECGGGTS-----------CCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEE
T ss_pred             hCCeEEEEeCccccC-----------CCCcchHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEec
Confidence            126999999987652           333454 8999999999999999877    4899999998

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.88  E-value=8.1e-23  Score=163.84  Aligned_cols=142  Identities=15%  Similarity=0.102  Sum_probs=117.6

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC--EEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~  148 (248)
                      |+|+||||+|+||++++++|+++|+  +|++++|+..+             ...++.++.+|++|.+++.+++    +|+
T Consensus         6 ~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~-------------~~~~~~~~~~D~~~~~~~~~~~----~d~   68 (215)
T 2a35_A            6 KRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA-------------EHPRLDNPVGPLAELLPQLDGS----IDT   68 (215)
T ss_dssp             CEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC-------------CCTTEECCBSCHHHHGGGCCSC----CSE
T ss_pred             ceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc-------------cCCCceEEeccccCHHHHHHhh----hcE
Confidence            7899999999999999999999998  99998875432             0235778899999988877665    899


Q ss_pred             EEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCCChHHHHHHHHH
Q 025786          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAE  228 (248)
Q Consensus       149 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e  228 (248)
                      ||||||....  .....++.++.|..++.++++++.+.+.++||++||..+|+.             +.+.|+.+|.++|
T Consensus        69 vi~~a~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~-------------~~~~y~~sK~~~e  133 (215)
T 2a35_A           69 AFCCLGTTIK--EAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADAK-------------SSIFYNRVKGELE  133 (215)
T ss_dssp             EEECCCCCHH--HHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTT-------------CSSHHHHHHHHHH
T ss_pred             EEECeeeccc--cCCCHHHHHHhhHHHHHHHHHHHHHcCCCEEEEECCcccCCC-------------CccHHHHHHHHHH
Confidence            9999996532  123556777888899999999999988889999999888742             3568999999999


Q ss_pred             HHHHHHhhcCCCc-EEEEecC
Q 025786          229 DIILDFSKNSDMA-VLQCHRF  248 (248)
Q Consensus       229 ~l~~~~~~~~gi~-~~~v~Pf  248 (248)
                      ++++.    .|++ ++++||.
T Consensus       134 ~~~~~----~~~~~~~~vrp~  150 (215)
T 2a35_A          134 QALQE----QGWPQLTIARPS  150 (215)
T ss_dssp             HHHTT----SCCSEEEEEECC
T ss_pred             HHHHH----cCCCeEEEEeCc
Confidence            98865    5899 9999984

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=99.87  E-value=2.2e-21  Score=162.20  Aligned_cols=138  Identities=16%  Similarity=0.243  Sum_probs=112.5

Q ss_pred             eEEEEecCCchhHHHHHHHHHHC--CCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKD--SYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~  148 (248)
                      |+|+||||||+||++++++|+++  |++|++++|+..+...    +..     .++.++.+|++|.+++.++++  ++|+
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~----l~~-----~~~~~~~~D~~d~~~l~~~~~--~~d~   69 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKAST----LAD-----QGVEVRHGDYNQPESLQKAFA--GVSK   69 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHH----HHH-----TTCEEEECCTTCHHHHHHHTT--TCSE
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhH----Hhh-----cCCeEEEeccCCHHHHHHHHh--cCCE
Confidence            47999999999999999999999  9999999975433211    111     257889999999999999987  6899


Q ss_pred             EEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCCChHHHHHHHHH
Q 025786          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAE  228 (248)
Q Consensus       149 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e  228 (248)
                      |||+|+...      .  .  ..|..++.++++++++.+.++||++||.+++..              ..+|+.+|.++|
T Consensus        70 vi~~a~~~~------~--~--~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~--------------~~~y~~~K~~~E  125 (287)
T 2jl1_A           70 LLFISGPHY------D--N--TLLIVQHANVVKAARDAGVKHIAYTGYAFAEES--------------IIPLAHVHLATE  125 (287)
T ss_dssp             EEECCCCCS------C--H--HHHHHHHHHHHHHHHHTTCSEEEEEEETTGGGC--------------CSTHHHHHHHHH
T ss_pred             EEEcCCCCc------C--c--hHHHHHHHHHHHHHHHcCCCEEEEECCCCCCCC--------------CCchHHHHHHHH
Confidence            999998521      1  1  457788999999999988889999999877621              137999999999


Q ss_pred             HHHHHHhhcCCCcEEEEec
Q 025786          229 DIILDFSKNSDMAVLQCHR  247 (248)
Q Consensus       229 ~l~~~~~~~~gi~~~~v~P  247 (248)
                      ++++.    .|++++++||
T Consensus       126 ~~~~~----~~~~~~ilrp  140 (287)
T 2jl1_A          126 YAIRT----TNIPYTFLRN  140 (287)
T ss_dssp             HHHHH----TTCCEEEEEE
T ss_pred             HHHHH----cCCCeEEEEC
Confidence            98864    7999999998

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=99.86  E-value=1.1e-21  Score=165.37  Aligned_cols=166  Identities=11%  Similarity=-0.065  Sum_probs=109.1

Q ss_pred             eEEEEecCC--chhHHHHHHHHHHCCCEEEEEecCCC--------CcchhhhhhhhhcCCC--CceEEEEcc--------
Q 025786           71 THVLVTGGA--GYIGSHAALRLLKDSYRVTIVDNLSR--------GNIGAVKVLQELFPEP--GRLQFIYAD--------  130 (248)
Q Consensus        71 k~vlITGas--g~IG~~la~~L~~~G~~V~~~~r~~~--------~~~~~~~~~~~~~~~~--~~~~~~~~D--------  130 (248)
                      |+++||||+  +|||++++++|+++|++|++++|+..        +.+.+.+ .+++....  .....+.+|        
T Consensus         9 k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d   87 (297)
T 1d7o_A            9 KRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQ-SRVLPDGSLMEIKKVYPLDAVFDNPED   87 (297)
T ss_dssp             CEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTG-GGBCTTSSBCCEEEEEEECTTCCSGGG
T ss_pred             CEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhh-hhhhccccccccccccccceeccchhh
Confidence            899999999  99999999999999999999885310        0111111 11111100  112333333        


Q ss_pred             CC----C--------HHHHHHHhhc-----CCCCEEEEcccccc--cCCCCCC----chhhHhhhHHHHHHHHHHHHHc-
Q 025786          131 LG----D--------AKAVNKFFSE-----NAFDAVMHFAAVAY--VGESTLD----PLKYYHNITSNTLVVLESMARH-  186 (248)
Q Consensus       131 l~----~--------~~~~~~~~~~-----~~iD~li~~Ag~~~--~~~~~~~----~~~~~~~~~~~~~~ll~~~~~~-  186 (248)
                      ++    |        ++++++++++     +++|+||||||+..  ..+..+.    .+..++.|+.++..+.+.+... 
T Consensus        88 v~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m  167 (297)
T 1d7o_A           88 VPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIM  167 (297)
T ss_dssp             SCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGE
T ss_pred             hhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHh
Confidence            32    2        4456555543     68999999999643  2222222    2334556666777776666542 


Q ss_pred             -CCCEEEEeccceecCCCCCCCCCCCCCCCCC-ChHHHHHHHHHHHHHHHhhc----CCCcEEEEecC
Q 025786          187 -GVDTLIYSSTCATYGEPEKMPITEETPQAPI-NPYGKAKKMAEDIILDFSKN----SDMAVLQCHRF  248 (248)
Q Consensus       187 -~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~-~~Y~~sK~a~e~l~~~~~~~----~gi~~~~v~Pf  248 (248)
                       ..++||++||.+.+.           +.+.. ..|+.||++.+.+++.++.+    +|+++++|+|.
T Consensus       168 ~~~g~iv~isS~~~~~-----------~~~~~~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG  224 (297)
T 1d7o_A          168 NPGGASISLTYIASER-----------IIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAG  224 (297)
T ss_dssp             EEEEEEEEEECGGGTS-----------CCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEC
T ss_pred             ccCceEEEEecccccc-----------CCCCcchHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEecc
Confidence             136999999987652           22334 58999999999999999877    58999999994

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.86  E-value=4.7e-21  Score=164.70  Aligned_cols=148  Identities=17%  Similarity=0.292  Sum_probs=118.2

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li  150 (248)
                      |+|+||||||+||++++++|+++|++|++++|.........+.++.+.  ..++.++.+|++|.+++.+++++.++|+||
T Consensus        11 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~--~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vi   88 (346)
T 3i6i_A           11 GRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALE--DKGAIIVYGLINEQEAMEKILKEHEIDIVV   88 (346)
T ss_dssp             CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHH--HTTCEEEECCTTCHHHHHHHHHHTTCCEEE
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHH--hCCcEEEEeecCCHHHHHHHHhhCCCCEEE
Confidence            789999999999999999999999999999986533222222222222  246889999999999999999876799999


Q ss_pred             EcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcC-CCEEEEeccceecCCCCCCCCCCCCCCCCCChHHHHHHHHHH
Q 025786          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHG-VDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAED  229 (248)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~-~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e~  229 (248)
                      |+||..               |..++.++++++++.+ .++||+ |+   ||.    +.+|..+..|...|+.+|.++|.
T Consensus        89 ~~a~~~---------------n~~~~~~l~~aa~~~g~v~~~v~-S~---~g~----~~~e~~~~~p~~~y~~sK~~~e~  145 (346)
T 3i6i_A           89 STVGGE---------------SILDQIALVKAMKAVGTIKRFLP-SE---FGH----DVNRADPVEPGLNMYREKRRVRQ  145 (346)
T ss_dssp             ECCCGG---------------GGGGHHHHHHHHHHHCCCSEEEC-SC---CSS----CTTTCCCCTTHHHHHHHHHHHHH
T ss_pred             ECCchh---------------hHHHHHHHHHHHHHcCCceEEee-cc---cCC----CCCccCcCCCcchHHHHHHHHHH
Confidence            999862               5567889999999988 888885 43   432    24556677788899999999999


Q ss_pred             HHHHHhhcCCCcEEEEec
Q 025786          230 IILDFSKNSDMAVLQCHR  247 (248)
Q Consensus       230 l~~~~~~~~gi~~~~v~P  247 (248)
                      +++.    .|++++++||
T Consensus       146 ~l~~----~g~~~tivrp  159 (346)
T 3i6i_A          146 LVEE----SGIPFTYICC  159 (346)
T ss_dssp             HHHH----TTCCBEEEEC
T ss_pred             HHHH----cCCCEEEEEe
Confidence            8875    6899999997

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=99.86  E-value=3.9e-21  Score=168.39  Aligned_cols=167  Identities=11%  Similarity=-0.033  Sum_probs=115.3

Q ss_pred             ceEEEEecCCchhHHH--HHHHHHHCCCEEEEEecCCCCcchh--------hhhhh-hhcCCCCceEEEEccCCCHHHHH
Q 025786           70 VTHVLVTGGAGYIGSH--AALRLLKDSYRVTIVDNLSRGNIGA--------VKVLQ-ELFPEPGRLQFIYADLGDAKAVN  138 (248)
Q Consensus        70 ~k~vlITGasg~IG~~--la~~L~~~G~~V~~~~r~~~~~~~~--------~~~~~-~~~~~~~~~~~~~~Dl~~~~~~~  138 (248)
                      +|++|||||++|||++  +++.|+++|++|++++|.....+..        .+... .....+.++.++.+|++|.++++
T Consensus        60 gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd~~~v~  139 (418)
T 4eue_A           60 PKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFSNETKD  139 (418)
T ss_dssp             CSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTCHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCCHHHHH
Confidence            4999999999999999  9999999999999999764432210        11111 11122457889999999999998


Q ss_pred             HHhhc-----CCCCEEEEccccc-------------ccCCC---------------------CCCchhhHhhhHHH----
Q 025786          139 KFFSE-----NAFDAVMHFAAVA-------------YVGES---------------------TLDPLKYYHNITSN----  175 (248)
Q Consensus       139 ~~~~~-----~~iD~li~~Ag~~-------------~~~~~---------------------~~~~~~~~~~~~~~----  175 (248)
                      +++++     +++|+||||||..             ...+.                     ....++.|+..+..    
T Consensus       140 ~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~~~vn~~~  219 (418)
T 4eue_A          140 KVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEETRKVMGGE  219 (418)
T ss_dssp             HHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHHHHHHHSSH
T ss_pred             HHHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHHhhHH
Confidence            88875     6899999999974             11111                     11233444433322    


Q ss_pred             HH-HHHHHHHHc----CCCEEEEeccceecCCCCCCCCCCCCCCCCC--ChHHHHHHHHHHHHHHHhhc----CCCcEEE
Q 025786          176 TL-VVLESMARH----GVDTLIYSSTCATYGEPEKMPITEETPQAPI--NPYGKAKKMAEDIILDFSKN----SDMAVLQ  244 (248)
Q Consensus       176 ~~-~ll~~~~~~----~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~--~~Y~~sK~a~e~l~~~~~~~----~gi~~~~  244 (248)
                      .. .++..+...    +.++||++||.+..-           +.+..  ..|++||++++.+++.++.+    +||++++
T Consensus       220 ~~~~~~~~l~~~~~~~~gg~IV~iSSi~~~~-----------~~p~~~~~aY~ASKaAL~~ltrsLA~ELa~~~GIrVN~  288 (418)
T 4eue_A          220 DWQEWCEELLYEDCFSDKATTIAYSYIGSPR-----------TYKIYREGTIGIAKKDLEDKAKLINEKLNRVIGGRAFV  288 (418)
T ss_dssp             HHHHHHHHHHHTTCEEEEEEEEEEECCCCGG-----------GTTTTTTSHHHHHHHHHHHHHHHHHHHHHHHHSCEEEE
T ss_pred             HHHHHHHHHHHHhhhcCCcEEEEEeCchhcC-----------CCCccccHHHHHHHHHHHHHHHHHHHHhCCccCeEEEE
Confidence            11 233333322    246899999976541           22334  79999999999999999987    5799999


Q ss_pred             Eec
Q 025786          245 CHR  247 (248)
Q Consensus       245 v~P  247 (248)
                      |.|
T Consensus       289 V~P  291 (418)
T 4eue_A          289 SVN  291 (418)
T ss_dssp             EEC
T ss_pred             EEC
Confidence            988

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=99.86  E-value=2e-21  Score=165.22  Aligned_cols=164  Identities=13%  Similarity=-0.013  Sum_probs=108.1

Q ss_pred             eEEEEecC--CchhHHHHHHHHHHCCCEEEEEecCCC--------CcchhhhhhhhhcCCCC---ceEEEEcc-------
Q 025786           71 THVLVTGG--AGYIGSHAALRLLKDSYRVTIVDNLSR--------GNIGAVKVLQELFPEPG---RLQFIYAD-------  130 (248)
Q Consensus        71 k~vlITGa--sg~IG~~la~~L~~~G~~V~~~~r~~~--------~~~~~~~~~~~~~~~~~---~~~~~~~D-------  130 (248)
                      |+++||||  ++|||++++++|+++|++|++++|+..        ..+.+.+ .+++.. +.   .+.++.+|       
T Consensus        10 k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~d~~~~~~~   87 (315)
T 2o2s_A           10 QTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDE-DRKLPD-GSLIEFAGVYPLDAAFDKPE   87 (315)
T ss_dssp             CEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHH-HHBCTT-SCBCCCSCEEECCTTCSSTT
T ss_pred             CEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhh-hhhhhc-cccccccccccccccccccc
Confidence            89999999  899999999999999999999986420        0011111 122211 11   12344443       


Q ss_pred             -----CCC--------HHHHHHHhhc-----CCCCEEEEcccccc--cCCCCCCc----hhhHhhhHHHHHHHHHHHHHc
Q 025786          131 -----LGD--------AKAVNKFFSE-----NAFDAVMHFAAVAY--VGESTLDP----LKYYHNITSNTLVVLESMARH  186 (248)
Q Consensus       131 -----l~~--------~~~~~~~~~~-----~~iD~li~~Ag~~~--~~~~~~~~----~~~~~~~~~~~~~ll~~~~~~  186 (248)
                           ++|        .+++++++++     +++|+||||||+..  ..+..+.+    +..++.|+.++..+...+...
T Consensus        88 ~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~  167 (315)
T 2o2s_A           88 DVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQHFGPI  167 (315)
T ss_dssp             SSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHSTT
T ss_pred             hhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence                 332        4456665553     68999999999753  22222222    234456666666666665432


Q ss_pred             --CCCEEEEeccceecCCCCCCCCCCCCCCCCC-ChHHHHHHHHHHHHHHHhhc----CCCcEEEEec
Q 025786          187 --GVDTLIYSSTCATYGEPEKMPITEETPQAPI-NPYGKAKKMAEDIILDFSKN----SDMAVLQCHR  247 (248)
Q Consensus       187 --~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~-~~Y~~sK~a~e~l~~~~~~~----~gi~~~~v~P  247 (248)
                        ..++||++||.+.+.           +.+.. ..|+.||++.+.+++.++.+    +||++++|+|
T Consensus       168 m~~~g~Iv~isS~~~~~-----------~~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~P  224 (315)
T 2o2s_A          168 MNEGGSAVTLSYLAAER-----------VVPGYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISA  224 (315)
T ss_dssp             EEEEEEEEEEEEGGGTS-----------CCTTCCTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEE
T ss_pred             HhcCCEEEEEecccccc-----------cCCCccHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEec
Confidence              126999999987652           22233 47999999999999999876    5899999998

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=99.85  E-value=4.1e-21  Score=166.47  Aligned_cols=129  Identities=18%  Similarity=0.272  Sum_probs=111.6

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC-EEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~l  149 (248)
                      |+||||||||+||++++++|+++|+ +|+.++|.                            +|.+++.++++  ++|+|
T Consensus         1 M~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~----------------------------~d~~~l~~~~~--~~d~V   50 (369)
T 3st7_A            1 MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ----------------------------TKEEELESALL--KADFI   50 (369)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT----------------------------CCHHHHHHHHH--HCSEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC----------------------------CCHHHHHHHhc--cCCEE
Confidence            5799999999999999999999998 88776531                            67888888887  58999


Q ss_pred             EEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCC-EEEEeccceecCCCCCCCCCCCCCCCCCChHHHHHHHHH
Q 025786          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD-TLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAE  228 (248)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~-~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e  228 (248)
                      ||+||....    ..+.+.++.|..++.++++++++.+.+ +||++||..+|+               .+.|+.||.++|
T Consensus        51 ih~a~~~~~----~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~Ss~~~~~---------------~~~Y~~sK~~~E  111 (369)
T 3st7_A           51 VHLAGVNRP----EHDKEFSLGNVSYLDHVLDILTRNTKKPAILLSSSIQATQ---------------DNPYGESKLQGE  111 (369)
T ss_dssp             EECCCSBCT----TCSTTCSSSCCBHHHHHHHHHTTCSSCCEEEEEEEGGGGS---------------CSHHHHHHHHHH
T ss_pred             EECCcCCCC----CCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCchhhcC---------------CCCchHHHHHHH
Confidence            999997643    245566778888999999999988876 999999999885               568999999999


Q ss_pred             HHHHHHhhcCCCcEEEEecC
Q 025786          229 DIILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       229 ~l~~~~~~~~gi~~~~v~Pf  248 (248)
                      ++++.++++.|++++++||.
T Consensus       112 ~~~~~~~~~~g~~~~i~R~~  131 (369)
T 3st7_A          112 QLLREYAEEYGNTVYIYRWP  131 (369)
T ss_dssp             HHHHHHHHHHCCCEEEEEEC
T ss_pred             HHHHHHHHHhCCCEEEEECC
Confidence            99999999999999999984

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=99.85  E-value=1.1e-20  Score=157.66  Aligned_cols=135  Identities=15%  Similarity=0.196  Sum_probs=106.8

Q ss_pred             EEEEecCCchhHHHHHHHHHHC--CCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 025786           72 HVLVTGGAGYIGSHAALRLLKD--SYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (248)
Q Consensus        72 ~vlITGasg~IG~~la~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~l  149 (248)
                      +|+||||||+||++++++|+++  |++|++++|+..+...    +..     .++.++.+|++|.+++.++++  ++|+|
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~----~~~-----~~~~~~~~D~~d~~~~~~~~~--~~d~v   69 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQA----LAA-----QGITVRQADYGDEAALTSALQ--GVEKL   69 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHH----HHH-----TTCEEEECCTTCHHHHHHHTT--TCSEE
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhh----hhc-----CCCeEEEcCCCCHHHHHHHHh--CCCEE
Confidence            4899999999999999999999  9999999975443221    111     257889999999999999987  68999


Q ss_pred             EEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCCChHHHHHHHHHH
Q 025786          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAED  229 (248)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e~  229 (248)
                      ||+|+...            ..++.++.++++++++.+.++||++||.++|.              ...+|+.+|.++|+
T Consensus        70 i~~a~~~~------------~~~~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~--------------~~~~y~~sK~~~e~  123 (286)
T 2zcu_A           70 LLISSSEV------------GQRAPQHRNVINAAKAAGVKFIAYTSLLHADT--------------SPLGLADEHIETEK  123 (286)
T ss_dssp             EECC--------------------CHHHHHHHHHHHHTCCEEEEEEETTTTT--------------CCSTTHHHHHHHHH
T ss_pred             EEeCCCCc------------hHHHHHHHHHHHHHHHcCCCEEEEECCCCCCC--------------CcchhHHHHHHHHH
Confidence            99998521            13566789999999998889999999987761              11379999999999


Q ss_pred             HHHHHhhcCCCcEEEEec
Q 025786          230 IILDFSKNSDMAVLQCHR  247 (248)
Q Consensus       230 l~~~~~~~~gi~~~~v~P  247 (248)
                      +++.    .|++++++||
T Consensus       124 ~~~~----~~~~~~ilrp  137 (286)
T 2zcu_A          124 MLAD----SGIVYTLLRN  137 (286)
T ss_dssp             HHHH----HCSEEEEEEE
T ss_pred             HHHH----cCCCeEEEeC
Confidence            8865    5899999998

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.85  E-value=3.6e-20  Score=155.96  Aligned_cols=148  Identities=17%  Similarity=0.139  Sum_probs=115.5

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCC-CEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDS-YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~l  149 (248)
                      |+|+||||||+||++++++|+++| ++|++++|+..+..  .+.+.     ...+.++.+|++|.+++.++++  ++|+|
T Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~--~~~l~-----~~~~~~~~~D~~d~~~l~~~~~--~~d~v   76 (299)
T 2wm3_A            6 KLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKA--AKELR-----LQGAEVVQGDQDDQVIMELALN--GAYAT   76 (299)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHH--HHHHH-----HTTCEEEECCTTCHHHHHHHHT--TCSEE
T ss_pred             CEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHH--HHHHH-----HCCCEEEEecCCCHHHHHHHHh--cCCEE
Confidence            789999999999999999999999 99999998643321  11111     1257889999999999999997  68999


Q ss_pred             EEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCCChHHHHHHHHHH
Q 025786          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAED  229 (248)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e~  229 (248)
                      ||||+.....        ....+...+.++++++++.+.++||++||..+++...         ..+..+|+.+|.++|.
T Consensus        77 i~~a~~~~~~--------~~~~~~~~~~~~~~aa~~~gv~~iv~~S~~~~~~~~~---------~~~~~~y~~sK~~~e~  139 (299)
T 2wm3_A           77 FIVTNYWESC--------SQEQEVKQGKLLADLARRLGLHYVVYSGLENIKKLTA---------GRLAAAHFDGKGEVEE  139 (299)
T ss_dssp             EECCCHHHHT--------CHHHHHHHHHHHHHHHHHHTCSEEEECCCCCHHHHTT---------TSCCCHHHHHHHHHHH
T ss_pred             EEeCCCCccc--------cchHHHHHHHHHHHHHHHcCCCEEEEEcCccccccCC---------CcccCchhhHHHHHHH
Confidence            9999853211        1334566788999999998889999988877664221         1235689999999999


Q ss_pred             HHHHHhhcCCCcEEEEecC
Q 025786          230 IILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       230 l~~~~~~~~gi~~~~v~Pf  248 (248)
                      +++.    .|++++++||.
T Consensus       140 ~~~~----~gi~~~ilrp~  154 (299)
T 2wm3_A          140 YFRD----IGVPMTSVRLP  154 (299)
T ss_dssp             HHHH----HTCCEEEEECC
T ss_pred             HHHH----CCCCEEEEeec
Confidence            8875    48999999983

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=99.85  E-value=5.3e-21  Score=172.97  Aligned_cols=156  Identities=15%  Similarity=0.119  Sum_probs=119.5

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~l  149 (248)
                      +|+||||||||+||++++++|+++|++|++++|+..+.                 ..+.+|+.+.  +.+.++  ++|+|
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~-----------------~~v~~d~~~~--~~~~l~--~~D~V  205 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKP-----------------GKRFWDPLNP--ASDLLD--GADVL  205 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCT-----------------TCEECCTTSC--CTTTTT--TCSEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCc-----------------cceeecccch--hHHhcC--CCCEE
Confidence            48999999999999999999999999999999754321                 1156677642  233443  79999


Q ss_pred             EEcccccccCC-CCCCchhhHhhhHHHHHHHHHH-HHHcCCCEEEEeccceecC-CCCCCCCCCCCCCCCCChHHHHHHH
Q 025786          150 MHFAAVAYVGE-STLDPLKYYHNITSNTLVVLES-MARHGVDTLIYSSTCATYG-EPEKMPITEETPQAPINPYGKAKKM  226 (248)
Q Consensus       150 i~~Ag~~~~~~-~~~~~~~~~~~~~~~~~~ll~~-~~~~~~~~iV~~SS~~~~g-~~~~~~~~e~~~~~~~~~Y~~sK~a  226 (248)
                      ||+||...... ........++.|+.++.+++++ +.+.+.++||++||.++|| .....+++|+.+. +.+.|+.+|..
T Consensus       206 ih~A~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~a~~~~~~r~V~~SS~~vyg~~~~~~~~~E~~~~-~~~~y~~~~~~  284 (516)
T 3oh8_A          206 VHLAGEPIFGRFNDSHKEAIRESRVLPTKFLAELVAESTQCTTMISASAVGFYGHDRGDEILTEESES-GDDFLAEVCRD  284 (516)
T ss_dssp             EECCCC-----CCGGGHHHHHHHTHHHHHHHHHHHHHCSSCCEEEEEEEGGGGCSEEEEEEECTTSCC-CSSHHHHHHHH
T ss_pred             EECCCCccccccchhHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCcceEecCCCCCCccCCCCCC-CcChHHHHHHH
Confidence            99999754322 2334566778899999999998 4556678999999999998 4455567888776 78899999999


Q ss_pred             HHHHHHHHhhcCCCcEEEEecC
Q 025786          227 AEDIILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       227 ~e~l~~~~~~~~gi~~~~v~Pf  248 (248)
                      .|.+... +.+.|++++++||.
T Consensus       285 ~E~~~~~-~~~~gi~~~ilRp~  305 (516)
T 3oh8_A          285 WEHATAP-ASDAGKRVAFIRTG  305 (516)
T ss_dssp             HHHTTHH-HHHTTCEEEEEEEC
T ss_pred             HHHHHHH-HHhCCCCEEEEEee
Confidence            9987654 45579999999995

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=99.85  E-value=2.8e-21  Score=164.57  Aligned_cols=166  Identities=13%  Similarity=-0.021  Sum_probs=94.4

Q ss_pred             eEEEEecC--CchhHHHHHHHHHHCCCEEEEEecCC--------CCcchhh-----------hhhhhhcCCCC---ceEE
Q 025786           71 THVLVTGG--AGYIGSHAALRLLKDSYRVTIVDNLS--------RGNIGAV-----------KVLQELFPEPG---RLQF  126 (248)
Q Consensus        71 k~vlITGa--sg~IG~~la~~L~~~G~~V~~~~r~~--------~~~~~~~-----------~~~~~~~~~~~---~~~~  126 (248)
                      |++|||||  ++|||++++++|+++|++|++++|+.        +..+.+.           +..+++...+.   ...+
T Consensus        10 k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (319)
T 2ptg_A           10 KTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPVDLVFDKI   89 (319)
T ss_dssp             CEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC--------------------------------CCSEE
T ss_pred             CEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhcccccccccc
Confidence            89999999  89999999999999999999998631        1111111           01111111110   1244


Q ss_pred             EEcc------------CCC--------HHHHHHHhhc-----CCCCEEEEcccccc--cCCCCCCch----hhHhhhHHH
Q 025786          127 IYAD------------LGD--------AKAVNKFFSE-----NAFDAVMHFAAVAY--VGESTLDPL----KYYHNITSN  175 (248)
Q Consensus       127 ~~~D------------l~~--------~~~~~~~~~~-----~~iD~li~~Ag~~~--~~~~~~~~~----~~~~~~~~~  175 (248)
                      +.+|            ++|        .+++++++++     +++|+||||||+..  ..+..+.+.    ..++.|+.+
T Consensus        90 ~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g  169 (319)
T 2ptg_A           90 YPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAAVSSSSYS  169 (319)
T ss_dssp             EECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHHHHHHHHTHH
T ss_pred             ccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHHHHHhHhhHH
Confidence            4443            232        2356555553     68999999999752  222222222    344566666


Q ss_pred             HHHHHHHHHHc--CCCEEEEeccceecCCCCCCCCCCCCCCCCC-ChHHHHHHHHHHHHHHHhhc----CCCcEEEEec
Q 025786          176 TLVVLESMARH--GVDTLIYSSTCATYGEPEKMPITEETPQAPI-NPYGKAKKMAEDIILDFSKN----SDMAVLQCHR  247 (248)
Q Consensus       176 ~~~ll~~~~~~--~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~-~~Y~~sK~a~e~l~~~~~~~----~gi~~~~v~P  247 (248)
                      +..+...+...  ..++||++||...+.           +.+.. ..|+.||++.+.+++.++.+    +||++++|+|
T Consensus       170 ~~~l~~~~~~~m~~~g~Iv~isS~~~~~-----------~~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~P  237 (319)
T 2ptg_A          170 FVSLLQHFLPLMKEGGSALALSYIASEK-----------VIPGYGGGMSSAKAALESDCRTLAFEAGRARAVRVNCISA  237 (319)
T ss_dssp             HHHHHHHHGGGEEEEEEEEEEEECC-----------------------------THHHHHHHHHHHHHHHCCEEEEEEE
T ss_pred             HHHHHHHHHHHHhcCceEEEEecccccc-----------ccCccchhhHHHHHHHHHHHHHHHHHhccccCeeEEEEee
Confidence            66666655442  137999999977652           22234 57999999999999999877    4899999998

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.83  E-value=1.7e-19  Score=155.68  Aligned_cols=141  Identities=17%  Similarity=0.172  Sum_probs=109.9

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEcc-CCCHHHHHHHhhcCCCCEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYAD-LGDAKAVNKFFSENAFDAV  149 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D-l~~~~~~~~~~~~~~iD~l  149 (248)
                      |+|+||||||+||++++++|+++|++|++++|+..+..  .+.+..    ..++.++.+| ++|.+++.++++  ++|+|
T Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~--~~~l~~----~~~v~~v~~D~l~d~~~l~~~~~--~~d~V   77 (352)
T 1xgk_A            6 KTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLI--AEELQA----IPNVTLFQGPLLNNVPLMDTLFE--GAHLA   77 (352)
T ss_dssp             CCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHH--HHHHHT----STTEEEEESCCTTCHHHHHHHHT--TCSEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhh--HHHHhh----cCCcEEEECCccCCHHHHHHHHh--cCCEE
Confidence            78999999999999999999999999999987543321  111111    2368889999 999999999987  68999


Q ss_pred             EEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcC-CCEEEEeccce--ecCCCCCCCCCCCCCCCCCChHHHHHHH
Q 025786          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHG-VDTLIYSSTCA--TYGEPEKMPITEETPQAPINPYGKAKKM  226 (248)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~-~~~iV~~SS~~--~~g~~~~~~~~e~~~~~~~~~Y~~sK~a  226 (248)
                      |||++...           ...|..+ .++++++++.+ .++||++||..  .|+.            .+..+|+.||.+
T Consensus        78 i~~a~~~~-----------~~~~~~~-~~l~~aa~~~g~v~~~V~~SS~~~~~~~~------------~~~~~y~~sK~~  133 (352)
T 1xgk_A           78 FINTTSQA-----------GDEIAIG-KDLADAAKRAGTIQHYIYSSMPDHSLYGP------------WPAVPMWAPKFT  133 (352)
T ss_dssp             EECCCSTT-----------SCHHHHH-HHHHHHHHHHSCCSEEEEEECCCGGGTSS------------CCCCTTTHHHHH
T ss_pred             EEcCCCCC-----------cHHHHHH-HHHHHHHHHcCCccEEEEeCCccccccCC------------CCCccHHHHHHH
Confidence            99987431           0224444 88999999988 89999999975  3321            234679999999


Q ss_pred             HHHHHHHHhhcCCCcEEEEec
Q 025786          227 AEDIILDFSKNSDMAVLQCHR  247 (248)
Q Consensus       227 ~e~l~~~~~~~~gi~~~~v~P  247 (248)
                      +|+++++    .+++++++||
T Consensus       134 ~E~~~~~----~gi~~~ivrp  150 (352)
T 1xgk_A          134 VENYVRQ----LGLPSTFVYA  150 (352)
T ss_dssp             HHHHHHT----SSSCEEEEEE
T ss_pred             HHHHHHH----cCCCEEEEec
Confidence            9999876    4899999998

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.82  E-value=6.8e-20  Score=172.93  Aligned_cols=164  Identities=19%  Similarity=0.243  Sum_probs=126.5

Q ss_pred             ceEEEEecCCchhHHHHHHHHH-HCCC-EEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc----
Q 025786           70 VTHVLVTGGAGYIGSHAALRLL-KDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----  143 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~-~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~----  143 (248)
                      .++++||||+||||+++++.|+ ++|+ +|++++|+....+...+.++++...+.++.++.||++|.+++++++++    
T Consensus       530 ~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~~~~~  609 (795)
T 3slk_A          530 AGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACDVADRETLAKVLASIPDE  609 (795)
T ss_dssp             TSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTT
T ss_pred             ccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Confidence            3899999999999999999999 7999 588889875445555555555544466899999999999999999876    


Q ss_pred             CCCCEEEEcccccccCCCCCCchhhH----hhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCCCh
Q 025786          144 NAFDAVMHFAAVAYVGESTLDPLKYY----HNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINP  219 (248)
Q Consensus       144 ~~iD~li~~Ag~~~~~~~~~~~~~~~----~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~  219 (248)
                      .++|+||||||+.......+.+.+.|    +.|+.++.++.+.+. ... +||++||.+.+-           ..+.+..
T Consensus       610 ~~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~-~~l-~iV~~SS~ag~~-----------g~~g~~~  676 (795)
T 3slk_A          610 HPLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELID-PDV-ALVLFSSVSGVL-----------GSGGQGN  676 (795)
T ss_dssp             SCEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSC-TTS-EEEEEEETHHHH-----------TCSSCHH
T ss_pred             CCCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHh-hCC-EEEEEccHHhcC-----------CCCCCHH
Confidence            47999999999876554444444444    455666777777662 223 899999987652           2344779


Q ss_pred             HHHHHHHHHHHHHHHhhcCCCcEEEEec
Q 025786          220 YGKAKKMAEDIILDFSKNSDMAVLQCHR  247 (248)
Q Consensus       220 Y~~sK~a~e~l~~~~~~~~gi~~~~v~P  247 (248)
                      |++||+..+.+.++++. .|+++++|.|
T Consensus       677 YaAaka~~~alA~~~~~-~Gi~v~sI~p  703 (795)
T 3slk_A          677 YAAANSFLDALAQQRQS-RGLPTRSLAW  703 (795)
T ss_dssp             HHHHHHHHHHHHHHHHH-TTCCEEEEEE
T ss_pred             HHHHHHHHHHHHHHHHH-cCCeEEEEEC
Confidence            99999988888888765 5999999988

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=99.82  E-value=2.1e-19  Score=178.35  Aligned_cols=166  Identities=16%  Similarity=0.107  Sum_probs=118.8

Q ss_pred             ceEEEEecCCch-hHHHHHHHHHHCCCEEEEEe-cCCCCcchhhhhh-hhhcCCCCceEEEEccCCCHHHHHHHhhc---
Q 025786           70 VTHVLVTGGAGY-IGSHAALRLLKDSYRVTIVD-NLSRGNIGAVKVL-QELFPEPGRLQFIYADLGDAKAVNKFFSE---  143 (248)
Q Consensus        70 ~k~vlITGasg~-IG~~la~~L~~~G~~V~~~~-r~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~---  143 (248)
                      +|++|||||++| ||+++++.|+++|++|++++ |+....++..+.+ +++...+.++.++.+|++|.+++++++++   
T Consensus       675 gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv~~i~~  754 (1887)
T 2uv8_A          675 DKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEFIYD  754 (1887)
T ss_dssp             TCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHHHS
T ss_pred             CCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHHHHHHH
Confidence            389999999998 99999999999999999985 3322222222222 22222345789999999999999988863   


Q ss_pred             C--------CCCEEEEcccccccC-CCCCCc------hhhHhhhHHHHHHHHHHHH------HcCCCEEEEeccceecCC
Q 025786          144 N--------AFDAVMHFAAVAYVG-ESTLDP------LKYYHNITSNTLVVLESMA------RHGVDTLIYSSTCATYGE  202 (248)
Q Consensus       144 ~--------~iD~li~~Ag~~~~~-~~~~~~------~~~~~~~~~~~~~ll~~~~------~~~~~~iV~~SS~~~~g~  202 (248)
                      .        ++|+||||||+.... ...+.+      +..+..|+.+...+...++      +++.++||++||.+++..
T Consensus       755 ~~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~IVnISS~ag~~g  834 (1887)
T 2uv8_A          755 TEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHGTFG  834 (1887)
T ss_dssp             CTTTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEEEEECSCTTCSS
T ss_pred             hccccccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEEEEEcChHhccC
Confidence            2        699999999986544 333222      3344566666656655552      222369999999765421


Q ss_pred             CCCCCCCCCCCCCCCChHHHHHHHHHHH-HHHHhhcCC--CcEEEEecC
Q 025786          203 PEKMPITEETPQAPINPYGKAKKMAEDI-ILDFSKNSD--MAVLQCHRF  248 (248)
Q Consensus       203 ~~~~~~~e~~~~~~~~~Y~~sK~a~e~l-~~~~~~~~g--i~~~~v~Pf  248 (248)
                                   ....|+.||++++.| .+.++.+++  |++++|+|.
T Consensus       835 -------------g~~aYaASKAAL~~Lttr~lA~ela~~IrVNaV~PG  870 (1887)
T 2uv8_A          835 -------------GDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIG  870 (1887)
T ss_dssp             -------------CBTTHHHHHHHGGGHHHHHHHSSCTTTEEEEEEEEC
T ss_pred             -------------CCchHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEec
Confidence                         356899999999999 888888755  999999983

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=99.82  E-value=2e-19  Score=151.44  Aligned_cols=152  Identities=16%  Similarity=0.172  Sum_probs=113.4

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li  150 (248)
                      |+|||||||||||++++++|+++||+|+++.|++..               .++   ..|    +...+.+  .++|+||
T Consensus         1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~---------------~~~---~~~----~~~~~~l--~~~d~vi   56 (298)
T 4b4o_A            1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGP---------------GRI---TWD----ELAASGL--PSCDAAV   56 (298)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCT---------------TEE---EHH----HHHHHCC--CSCSEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCc---------------Cee---ecc----hhhHhhc--cCCCEEE
Confidence            569999999999999999999999999999874321               111   122    1112222  2689999


Q ss_pred             EcccccccCC----CCCCchhhHhhhHHHHHHHHHHHHHcCC--CEEEEeccceecCCCCCCCCCCCCCCCCCChHHHHH
Q 025786          151 HFAAVAYVGE----STLDPLKYYHNITSNTLVVLESMARHGV--DTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAK  224 (248)
Q Consensus       151 ~~Ag~~~~~~----~~~~~~~~~~~~~~~~~~ll~~~~~~~~--~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK  224 (248)
                      |+|+......    ........+..+..+|.++++.+.+.+.  .++|++||.++||.....+.+|+.+..+.+.|+.+|
T Consensus        57 hla~~~i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~~~~~~~i~~Ss~~vyg~~~~~~~~E~~p~~~~~~~~~~~  136 (298)
T 4b4o_A           57 NLAGENILNPLRRWNETFQKEVLGSRLETTQLLAKAITKAPQPPKAWVLVTGVAYYQPSLTAEYDEDSPGGDFDFFSNLV  136 (298)
T ss_dssp             ECCCCCSSCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCCSEEEEEEEGGGSCCCSSCCBCTTCCCSCSSHHHHHH
T ss_pred             EeccCcccchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHhCCCceEEEEEeeeeeecCCCCCcccccCCccccchhHHHH
Confidence            9998532221    1122344567788889999999987654  468889999999998888999999999999999988


Q ss_pred             HHHHHHHHHHhhcCCCcEEEEecC
Q 025786          225 KMAEDIILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       225 ~a~e~l~~~~~~~~gi~~~~v~Pf  248 (248)
                      ...|..  .+..+.+++++++||.
T Consensus       137 ~~~e~~--~~~~~~~~~~~~~r~~  158 (298)
T 4b4o_A          137 TKWEAA--ARLPGDSTRQVVVRSG  158 (298)
T ss_dssp             HHHHHH--HCCSSSSSEEEEEEEC
T ss_pred             HHHHHH--HHhhccCCceeeeeee
Confidence            887764  3445678999999984

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.81  E-value=4.7e-19  Score=148.31  Aligned_cols=140  Identities=13%  Similarity=0.163  Sum_probs=102.6

Q ss_pred             eEEEEecCCchhHHHHHHHHHHC-CCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKD-SYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~l  149 (248)
                      |+||||||||+||++++++|+++ |++|++++|+..+....       .  ..++.++.+|++|++++.++++  ++|+|
T Consensus         1 M~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~-------~--~~~v~~~~~D~~d~~~l~~~~~--~~d~v   69 (289)
T 3e48_A            1 MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDD-------W--RGKVSVRQLDYFNQESMVEAFK--GMDTV   69 (289)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGG-------G--BTTBEEEECCTTCHHHHHHHTT--TCSEE
T ss_pred             CEEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHh-------h--hCCCEEEEcCCCCHHHHHHHHh--CCCEE
Confidence            46999999999999999999998 99999999765432211       1  2368899999999999999997  78999


Q ss_pred             EEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCCChHHHHHHHHHH
Q 025786          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAED  229 (248)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e~  229 (248)
                      |||||....          ...+...+.++++++++.+.++||++||.+..   .      ..+.    .+...+..+|.
T Consensus        70 i~~a~~~~~----------~~~~~~~~~~l~~aa~~~gv~~iv~~Ss~~~~---~------~~~~----~~~~~~~~~e~  126 (289)
T 3e48_A           70 VFIPSIIHP----------SFKRIPEVENLVYAAKQSGVAHIIFIGYYADQ---H------NNPF----HMSPYFGYASR  126 (289)
T ss_dssp             EECCCCCCS----------HHHHHHHHHHHHHHHHHTTCCEEEEEEESCCS---T------TCCS----TTHHHHHHHHH
T ss_pred             EEeCCCCcc----------chhhHHHHHHHHHHHHHcCCCEEEEEcccCCC---C------CCCC----ccchhHHHHHH
Confidence            999985421          12356778999999999998999999994321   1      0111    12222223333


Q ss_pred             HHHHHhhcCCCcEEEEecC
Q 025786          230 IILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       230 l~~~~~~~~gi~~~~v~Pf  248 (248)
                          ...+.|++++++||.
T Consensus       127 ----~~~~~g~~~~ilrp~  141 (289)
T 3e48_A          127 ----LLSTSGIDYTYVRMA  141 (289)
T ss_dssp             ----HHHHHCCEEEEEEEC
T ss_pred             ----HHHHcCCCEEEEecc
Confidence                334569999999984

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=99.81  E-value=7.5e-20  Score=176.89  Aligned_cols=164  Identities=16%  Similarity=0.125  Sum_probs=115.4

Q ss_pred             eEEEEecCCch-hHHHHHHHHHHCCCEEEEEe-cCCCCcchhhhhh-hhhcCCCCceEEEEccCCCHHHHHHHhhc---C
Q 025786           71 THVLVTGGAGY-IGSHAALRLLKDSYRVTIVD-NLSRGNIGAVKVL-QELFPEPGRLQFIYADLGDAKAVNKFFSE---N  144 (248)
Q Consensus        71 k~vlITGasg~-IG~~la~~L~~~G~~V~~~~-r~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~---~  144 (248)
                      |++|||||++| ||+++|+.|+++|++|++++ |+....++..+.+ ++....+.++.++.+|++|.+++++++++   .
T Consensus       477 KvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaLVe~I~e~  556 (1688)
T 2pff_A          477 KYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEFIYDT  556 (1688)
T ss_dssp             CCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHHHHHHHSC
T ss_pred             CEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHHHHHHHHh
Confidence            89999999998 99999999999999999984 4333333222222 11222245788999999999999888763   2


Q ss_pred             --------CCCEEEEcccccccC-CCCCCc------hhhHhhhHHHHHHHHHHH------HHcCCCEEEEeccceecCCC
Q 025786          145 --------AFDAVMHFAAVAYVG-ESTLDP------LKYYHNITSNTLVVLESM------ARHGVDTLIYSSTCATYGEP  203 (248)
Q Consensus       145 --------~iD~li~~Ag~~~~~-~~~~~~------~~~~~~~~~~~~~ll~~~------~~~~~~~iV~~SS~~~~g~~  203 (248)
                              ++|+||||||+.... ...+.+      ...++.|+.++..+...+      .+++.++||++||.+++.. 
T Consensus       557 ~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krggGrIVnISSiAG~~G-  635 (1688)
T 2pff_A          557 EKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHGTFG-  635 (1688)
T ss_dssp             TTSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCEEECCCCCSCTTTSS-
T ss_pred             ccccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCCCEEEEEEChHhccC-
Confidence                    699999999986544 333332      233455666655555544      2233469999999765421 


Q ss_pred             CCCCCCCCCCCCCCChHHHHHHHHHHH-HHHHhhcCC--CcEEEEec
Q 025786          204 EKMPITEETPQAPINPYGKAKKMAEDI-ILDFSKNSD--MAVLQCHR  247 (248)
Q Consensus       204 ~~~~~~e~~~~~~~~~Y~~sK~a~e~l-~~~~~~~~g--i~~~~v~P  247 (248)
                                  ....|++||++.+.+ .+.++.+++  |++++|+|
T Consensus       636 ------------g~saYaASKAAL~aLttrsLAeEla~~IRVNaVaP  670 (1688)
T 2pff_A          636 ------------GDGMYSESKLSLETLFNRWHSESWANQLTVCGAII  670 (1688)
T ss_dssp             ------------CBTTHHHHHHHHTHHHHHTTTSSCTTTEECCCCCC
T ss_pred             ------------CchHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEE
Confidence                        356899999999999 666666654  88888877

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.81  E-value=7e-19  Score=148.73  Aligned_cols=151  Identities=18%  Similarity=0.229  Sum_probs=110.0

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCc-chhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGN-IGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~  148 (248)
                      +|+|+||||||+||++++++|+++|++|++++|..... .+..+.++.+.  ..++.++.+|++|.+++.++++  ++|+
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~l~~~~~--~~d~   79 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFK--QLGAKLIEASLDDHQRLVDALK--QVDV   79 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHH--TTTCEEECCCSSCHHHHHHHHT--TCSE
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHH--hCCeEEEeCCCCCHHHHHHHHh--CCCE
Confidence            47899999999999999999999999999999864332 11112222221  2368889999999999999997  6999


Q ss_pred             EEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcC-CCEEEEeccceecCCCCCCCCCCCCCCCC-CChHHHHHHH
Q 025786          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHG-VDTLIYSSTCATYGEPEKMPITEETPQAP-INPYGKAKKM  226 (248)
Q Consensus       149 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~-~~~iV~~SS~~~~g~~~~~~~~e~~~~~~-~~~Y~~sK~a  226 (248)
                      |||+|+.....           .+...+.++++++++.+ .++||+ |+   ||.....+   ..+..| ...| .+|.+
T Consensus        80 vi~~a~~~~~~-----------~~~~~~~~l~~aa~~~g~v~~~v~-S~---~g~~~~~~---~~~~~p~~~~y-~sK~~  140 (313)
T 1qyd_A           80 VISALAGGVLS-----------HHILEQLKLVEAIKEAGNIKRFLP-SE---FGMDPDIM---EHALQPGSITF-IDKRK  140 (313)
T ss_dssp             EEECCCCSSSS-----------TTTTTHHHHHHHHHHSCCCSEEEC-SC---CSSCTTSC---CCCCSSTTHHH-HHHHH
T ss_pred             EEECCccccch-----------hhHHHHHHHHHHHHhcCCCceEEe-cC---CcCCcccc---ccCCCCCcchH-HHHHH
Confidence            99999865321           13456788999999988 889985 33   44221111   122233 4578 99999


Q ss_pred             HHHHHHHHhhcCCCcEEEEec
Q 025786          227 AEDIILDFSKNSDMAVLQCHR  247 (248)
Q Consensus       227 ~e~l~~~~~~~~gi~~~~v~P  247 (248)
                      +|++++    +.|++++++||
T Consensus       141 ~e~~~~----~~g~~~~ilrp  157 (313)
T 1qyd_A          141 VRRAIE----AASIPYTYVSS  157 (313)
T ss_dssp             HHHHHH----HTTCCBCEEEC
T ss_pred             HHHHHH----hcCCCeEEEEe
Confidence            999886    36899999998

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.80  E-value=5e-19  Score=149.31  Aligned_cols=146  Identities=14%  Similarity=0.243  Sum_probs=107.6

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCc--chhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCC
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGN--IGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFD  147 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD  147 (248)
                      ||+|+||||||+||++++++|+++|++|++++|.....  ....+.++.+.  ...+.++.+|++|.+++.++++  ++|
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~--~~~v~~v~~D~~d~~~l~~~~~--~~d   79 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFK--ASGANIVHGSIDDHASLVEAVK--NVD   79 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHH--TTTCEEECCCTTCHHHHHHHHH--TCS
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHH--hCCCEEEEeccCCHHHHHHHHc--CCC
Confidence            47899999999999999999999999999998864332  11112222221  2368889999999999999998  689


Q ss_pred             EEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcC-CCEEEEeccceecCCCCCCCCCCCCCCCC-CChHHHHHH
Q 025786          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHG-VDTLIYSSTCATYGEPEKMPITEETPQAP-INPYGKAKK  225 (248)
Q Consensus       148 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~-~~~iV~~SS~~~~g~~~~~~~~e~~~~~~-~~~Y~~sK~  225 (248)
                      +|||+|+...               ...+.++++++++.+ .++||+ |+   ||..    .+|..+..| ...| .+|.
T Consensus        80 ~vi~~a~~~~---------------~~~~~~l~~aa~~~g~v~~~v~-S~---~g~~----~~~~~~~~p~~~~y-~sK~  135 (308)
T 1qyc_A           80 VVISTVGSLQ---------------IESQVNIIKAIKEVGTVKRFFP-SE---FGND----VDNVHAVEPAKSVF-EVKA  135 (308)
T ss_dssp             EEEECCCGGG---------------SGGGHHHHHHHHHHCCCSEEEC-SC---CSSC----TTSCCCCTTHHHHH-HHHH
T ss_pred             EEEECCcchh---------------hhhHHHHHHHHHhcCCCceEee-cc---cccC----ccccccCCcchhHH-HHHH
Confidence            9999998532               234577899999887 889984 43   3321    122233333 4578 9999


Q ss_pred             HHHHHHHHHhhcCCCcEEEEec
Q 025786          226 MAEDIILDFSKNSDMAVLQCHR  247 (248)
Q Consensus       226 a~e~l~~~~~~~~gi~~~~v~P  247 (248)
                      ++|.+++.    .+++++++||
T Consensus       136 ~~e~~~~~----~~~~~~~~r~  153 (308)
T 1qyc_A          136 KVRRAIEA----EGIPYTYVSS  153 (308)
T ss_dssp             HHHHHHHH----HTCCBEEEEC
T ss_pred             HHHHHHHh----cCCCeEEEEe
Confidence            99988865    5889999987

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=99.80  E-value=2.8e-19  Score=177.21  Aligned_cols=164  Identities=16%  Similarity=0.126  Sum_probs=115.6

Q ss_pred             eEEEEecCCch-hHHHHHHHHHHCCCEEEEEecC-CCCcchhhhhh-hhhcCCCCceEEEEccCCCHHHHHHHhhc----
Q 025786           71 THVLVTGGAGY-IGSHAALRLLKDSYRVTIVDNL-SRGNIGAVKVL-QELFPEPGRLQFIYADLGDAKAVNKFFSE----  143 (248)
Q Consensus        71 k~vlITGasg~-IG~~la~~L~~~G~~V~~~~r~-~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~----  143 (248)
                      |++|||||++| ||+++++.|+++|++|+++++. ....++..+.+ +++...+.++.++.+|++|.+++.+++++    
T Consensus       653 KvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv~~i~~~  732 (1878)
T 2uv9_A          653 KHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALVNYIYDT  732 (1878)
T ss_dssp             CEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHHHCS
T ss_pred             CEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHh
Confidence            89999999999 9999999999999999998642 21111112222 33333345789999999999999988863    


Q ss_pred             ----C-CCCEEEEcccccccC-CCCCCc------hhhHhhhHHHHHHHHHH------HHHcCCCEEEEeccceecCCCCC
Q 025786          144 ----N-AFDAVMHFAAVAYVG-ESTLDP------LKYYHNITSNTLVVLES------MARHGVDTLIYSSTCATYGEPEK  205 (248)
Q Consensus       144 ----~-~iD~li~~Ag~~~~~-~~~~~~------~~~~~~~~~~~~~ll~~------~~~~~~~~iV~~SS~~~~g~~~~  205 (248)
                          + ++|+||||||+.... ...+.+      ...+..|+.++..+...      |.+++.++||++||.+++..   
T Consensus       733 ~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G~IVnISS~ag~~g---  809 (1878)
T 2uv9_A          733 KNGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPAQVILPLSPNHGTFG---  809 (1878)
T ss_dssp             SSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCEEECCEECSCSSSSS---
T ss_pred             hcccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCEEEEEcchhhccC---
Confidence                2 699999999986544 333333      23445555555544433      22233469999999766421   


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHHHHHHHHhhc-C--CCcEEEEec
Q 025786          206 MPITEETPQAPINPYGKAKKMAEDIILDFSKN-S--DMAVLQCHR  247 (248)
Q Consensus       206 ~~~~e~~~~~~~~~Y~~sK~a~e~l~~~~~~~-~--gi~~~~v~P  247 (248)
                                ....|+.||++++.|++.++.+ +  .|++++|+|
T Consensus       810 ----------g~~aYaASKAAL~aLt~~laAeEla~~IrVNaVaP  844 (1878)
T 2uv9_A          810 ----------NDGLYSESKLALETLFNRWYSESWGNYLTICGAVI  844 (1878)
T ss_dssp             ----------CCSSHHHHHHHHTTHHHHHHHSTTTTTEEEEEEEE
T ss_pred             ----------CchHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEe
Confidence                      2568999999999998876554 2  299999988

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.80  E-value=8.8e-19  Score=147.71  Aligned_cols=146  Identities=14%  Similarity=0.209  Sum_probs=106.7

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCC-CCcc--hhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCC
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS-RGNI--GAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAF  146 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~-~~~~--~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~i  146 (248)
                      ||+|+||||||+||++++++|+++|++|++++|.. ....  ...+.++.+.  ...+.++.+|++|.+++.++++  ++
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~--~~~v~~v~~D~~d~~~l~~~~~--~~   77 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQ--SLGVILLEGDINDHETLVKAIK--QV   77 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHH--HTTCEEEECCTTCHHHHHHHHT--TC
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHH--hCCCEEEEeCCCCHHHHHHHHh--CC
Confidence            47899999999999999999999999999999864 1111  1111122221  1357889999999999999998  69


Q ss_pred             CEEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcC-CCEEEEeccceecCCCCCCCCCCCCCCCC-CChHHHHH
Q 025786          147 DAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHG-VDTLIYSSTCATYGEPEKMPITEETPQAP-INPYGKAK  224 (248)
Q Consensus       147 D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~-~~~iV~~SS~~~~g~~~~~~~~e~~~~~~-~~~Y~~sK  224 (248)
                      |+|||+|+...               ...+.++++++++.+ .++||+ |+   ||..    .++..+..| ...| .+|
T Consensus        78 d~vi~~a~~~~---------------~~~~~~l~~aa~~~g~v~~~v~-S~---~g~~----~~~~~~~~p~~~~y-~sK  133 (307)
T 2gas_A           78 DIVICAAGRLL---------------IEDQVKIIKAIKEAGNVKKFFP-SE---FGLD----VDRHDAVEPVRQVF-EEK  133 (307)
T ss_dssp             SEEEECSSSSC---------------GGGHHHHHHHHHHHCCCSEEEC-SC---CSSC----TTSCCCCTTHHHHH-HHH
T ss_pred             CEEEECCcccc---------------cccHHHHHHHHHhcCCceEEee-cc---cccC----cccccCCCcchhHH-HHH
Confidence            99999998532               235678899999887 889983 33   3321    122233333 4579 999


Q ss_pred             HHHHHHHHHHhhcCCCcEEEEec
Q 025786          225 KMAEDIILDFSKNSDMAVLQCHR  247 (248)
Q Consensus       225 ~a~e~l~~~~~~~~gi~~~~v~P  247 (248)
                      .++|.+++.    .+++++++||
T Consensus       134 ~~~e~~~~~----~~i~~~~lrp  152 (307)
T 2gas_A          134 ASIRRVIEA----EGVPYTYLCC  152 (307)
T ss_dssp             HHHHHHHHH----HTCCBEEEEC
T ss_pred             HHHHHHHHH----cCCCeEEEEc
Confidence            999988864    5899999998

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.79  E-value=1.1e-18  Score=148.05  Aligned_cols=142  Identities=18%  Similarity=0.287  Sum_probs=105.7

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li  150 (248)
                      ++|+||||||+||++++++|+++|++|++++|+.....   +.++++.  ...++++.+|++|.+++.++++  ++|+||
T Consensus        12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~---~~~~~l~--~~~v~~v~~Dl~d~~~l~~a~~--~~d~vi   84 (318)
T 2r6j_A           12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKT---TLLDEFQ--SLGAIIVKGELDEHEKLVELMK--KVDVVI   84 (318)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCH---HHHHHHH--HTTCEEEECCTTCHHHHHHHHT--TCSEEE
T ss_pred             CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchh---hHHHHhh--cCCCEEEEecCCCHHHHHHHHc--CCCEEE
Confidence            68999999999999999999999999999998653221   1111111  1357889999999999999997  699999


Q ss_pred             EcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcC-CCEEEEeccceecCCCCCCCCCCCCCCCC-CChHHHHHHHHH
Q 025786          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHG-VDTLIYSSTCATYGEPEKMPITEETPQAP-INPYGKAKKMAE  228 (248)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~-~~~iV~~SS~~~~g~~~~~~~~e~~~~~~-~~~Y~~sK~a~e  228 (248)
                      |+|+...               ...+.++++++++.+ .++||+ |+   ||..    .+|..+..| ...| .+|.++|
T Consensus        85 ~~a~~~~---------------~~~~~~l~~aa~~~g~v~~~v~-S~---~g~~----~~~~~~~~p~~~~y-~sK~~~e  140 (318)
T 2r6j_A           85 SALAFPQ---------------ILDQFKILEAIKVAGNIKRFLP-SD---FGVE----EDRINALPPFEALI-ERKRMIR  140 (318)
T ss_dssp             ECCCGGG---------------STTHHHHHHHHHHHCCCCEEEC-SC---CSSC----TTTCCCCHHHHHHH-HHHHHHH
T ss_pred             ECCchhh---------------hHHHHHHHHHHHhcCCCCEEEe-ec---cccC----cccccCCCCcchhH-HHHHHHH
Confidence            9998532               234678999999887 889984 43   4321    122222223 3468 9999999


Q ss_pred             HHHHHHhhcCCCcEEEEec
Q 025786          229 DIILDFSKNSDMAVLQCHR  247 (248)
Q Consensus       229 ~l~~~~~~~~gi~~~~v~P  247 (248)
                      .+++.    .+++++++||
T Consensus       141 ~~~~~----~~~~~~~lr~  155 (318)
T 2r6j_A          141 RAIEE----ANIPYTYVSA  155 (318)
T ss_dssp             HHHHH----TTCCBEEEEC
T ss_pred             HHHHh----cCCCeEEEEc
Confidence            88864    6899999997

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.78  E-value=9.7e-19  Score=148.51  Aligned_cols=146  Identities=15%  Similarity=0.249  Sum_probs=106.9

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCC-CCc-chhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCC
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS-RGN-IGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFD  147 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~-~~~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD  147 (248)
                      ||+|+||||||+||++++++|+++|++|++++|+. ... ....+.+..+.  ...+.++.+|++|.+++.++++  ++|
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~--~~~v~~v~~D~~d~~~l~~a~~--~~d   79 (321)
T 3c1o_A            4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFR--SMGVTIIEGEMEEHEKMVSVLK--QVD   79 (321)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHH--HTTCEEEECCTTCHHHHHHHHT--TCS
T ss_pred             ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhh--cCCcEEEEecCCCHHHHHHHHc--CCC
Confidence            47899999999999999999999999999999864 211 11112222221  1358899999999999999998  689


Q ss_pred             EEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcC-CCEEEEeccceecCCCCCCCCCCCCCCCC-CChHHHHHH
Q 025786          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHG-VDTLIYSSTCATYGEPEKMPITEETPQAP-INPYGKAKK  225 (248)
Q Consensus       148 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~-~~~iV~~SS~~~~g~~~~~~~~e~~~~~~-~~~Y~~sK~  225 (248)
                      +|||+|+...               ...+.++++++++.+ .++||+ |+   ||..    .+|..+..| ...| .+|.
T Consensus        80 ~vi~~a~~~~---------------~~~~~~l~~aa~~~g~v~~~v~-S~---~g~~----~~~~~~~~p~~~~y-~sK~  135 (321)
T 3c1o_A           80 IVISALPFPM---------------ISSQIHIINAIKAAGNIKRFLP-SD---FGCE----EDRIKPLPPFESVL-EKKR  135 (321)
T ss_dssp             EEEECCCGGG---------------SGGGHHHHHHHHHHCCCCEEEC-SC---CSSC----GGGCCCCHHHHHHH-HHHH
T ss_pred             EEEECCCccc---------------hhhHHHHHHHHHHhCCccEEec-cc---cccC----ccccccCCCcchHH-HHHH
Confidence            9999998542               334678999999888 889983 32   3321    122222223 4579 9999


Q ss_pred             HHHHHHHHHhhcCCCcEEEEec
Q 025786          226 MAEDIILDFSKNSDMAVLQCHR  247 (248)
Q Consensus       226 a~e~l~~~~~~~~gi~~~~v~P  247 (248)
                      ++|.+++.    .+++++++||
T Consensus       136 ~~e~~~~~----~~~~~~~lrp  153 (321)
T 3c1o_A          136 IIRRAIEA----AALPYTYVSA  153 (321)
T ss_dssp             HHHHHHHH----HTCCBEEEEC
T ss_pred             HHHHHHHH----cCCCeEEEEe
Confidence            99998864    5899999997

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.74  E-value=2.5e-17  Score=170.25  Aligned_cols=165  Identities=14%  Similarity=0.058  Sum_probs=115.9

Q ss_pred             CceEEEEecCCchhHHHHHHHHHHCCCE-EEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc----
Q 025786           69 GVTHVLVTGGAGYIGSHAALRLLKDSYR-VTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----  143 (248)
Q Consensus        69 ~~k~vlITGasg~IG~~la~~L~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~----  143 (248)
                      .+|+++||||+||||+++++.|+++|++ |++++|+..+.+...+.++++...+.++.++.+|++|.+++++++++    
T Consensus      1883 ~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~ 1962 (2512)
T 2vz8_A         1883 PHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQGVQVLVSTSNASSLDGARSLITEATQL 1962 (2512)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHTTCEEEEECCCSSSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhCCCEEEEEecCCCCHHHHHHHHHHHHhc
Confidence            3489999999999999999999999997 77778765444333333443333355788899999999999888865    


Q ss_pred             CCCCEEEEcccccccCCCC----CCchhhHhhhHHHHHHHHHHHHHc--CCCEEEEeccceecCCCCCCCCCCCCCCCCC
Q 025786          144 NAFDAVMHFAAVAYVGEST----LDPLKYYHNITSNTLVVLESMARH--GVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (248)
Q Consensus       144 ~~iD~li~~Ag~~~~~~~~----~~~~~~~~~~~~~~~~ll~~~~~~--~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (248)
                      +++|+||||||+.......    +.....++.|+.++.++...+...  ..++||++||.++.-           +.+.+
T Consensus      1963 g~id~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~g~iV~iSS~ag~~-----------g~~g~ 2031 (2512)
T 2vz8_A         1963 GPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPELDYFVIFSSVSCGR-----------GNAGQ 2031 (2512)
T ss_dssp             SCEEEEEECCCC----------------CTTTTHHHHHHHHHHHHHHCTTCCEEEEECCHHHHT-----------TCTTC
T ss_pred             CCCcEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCEEEEecchhhcC-----------CCCCc
Confidence            6899999999986443322    233344567777877765555432  247999999977652           23346


Q ss_pred             ChHHHHHHHHHHHHHHHhhcCCCcEEEE
Q 025786          218 NPYGKAKKMAEDIILDFSKNSDMAVLQC  245 (248)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~~~~~gi~~~~v  245 (248)
                      ..|++||++.+.|++..+.+ |++...+
T Consensus      2032 ~~Y~aaKaal~~l~~~rr~~-Gl~~~a~ 2058 (2512)
T 2vz8_A         2032 ANYGFANSAMERICEKRRHD-GLPGLAV 2058 (2512)
T ss_dssp             HHHHHHHHHHHHHHHHHHHT-TSCCCEE
T ss_pred             HHHHHHHHHHHHHHHHHHHC-CCcEEEE
Confidence            78999999999999976654 6655444

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=99.72  E-value=1.8e-16  Score=164.21  Aligned_cols=166  Identities=11%  Similarity=0.030  Sum_probs=110.2

Q ss_pred             CCceEEEEecCCch-hHHHHHHHHHHCCCEEEEEecCCCCc--chhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-
Q 025786           68 EGVTHVLVTGGAGY-IGSHAALRLLKDSYRVTIVDNLSRGN--IGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-  143 (248)
Q Consensus        68 ~~~k~vlITGasg~-IG~~la~~L~~~G~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-  143 (248)
                      .+ |++|||||++| ||+++|+.|+++|++|++++|+....  +.+.+..+++...+.++..+.+|++|.+++++++++ 
T Consensus      2135 ~g-KvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv~~i 2213 (3089)
T 3zen_D         2135 XD-EVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLVEWV 2213 (3089)
T ss_dssp             CC-CEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CC-CEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHHH
Confidence            44 99999999999 99999999999999999998753321  013333444444456788899999999999888642 


Q ss_pred             --------CCCCEEEEcccc----cccC-C----CCCCchhh----HhhhHHHHHH----HHHHHHHcCCC---EEE-Ee
Q 025786          144 --------NAFDAVMHFAAV----AYVG-E----STLDPLKY----YHNITSNTLV----VLESMARHGVD---TLI-YS  194 (248)
Q Consensus       144 --------~~iD~li~~Ag~----~~~~-~----~~~~~~~~----~~~~~~~~~~----ll~~~~~~~~~---~iV-~~  194 (248)
                              +++|+||||||+    .... .    ..++....    ++.|..++..    +.+.|.+.+.+   .+| ..
T Consensus      2214 ~~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g~~~~ii~~~ 2293 (3089)
T 3zen_D         2214 GTEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERDIASRLHVVLPG 2293 (3089)
T ss_dssp             TSCCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCCEEEEEEE
T ss_pred             HhhhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceeEEEEEC
Confidence                    579999999997    2111 1    11112222    3444444433    45555555432   222 22


Q ss_pred             ccceecCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHhhc--C--CCcEEEEec
Q 025786          195 STCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKN--S--DMAVLQCHR  247 (248)
Q Consensus       195 SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e~l~~~~~~~--~--gi~~~~v~P  247 (248)
                      |+...             .......|++||++++.|++.++.|  +  +|+++.+.|
T Consensus      2294 ss~~g-------------~~g~~~aYsASKaAl~~LtrslA~E~~~a~~IrVn~v~P 2337 (3089)
T 3zen_D         2294 SPNRG-------------MFGGDGAYGEAKSALDALENRWSAEKSWAERVSLAHALI 2337 (3089)
T ss_dssp             CSSTT-------------SCSSCSSHHHHGGGHHHHHHHHHHCSTTTTTEEEEEEEC
T ss_pred             Ccccc-------------cCCCchHHHHHHHHHHHHHHHHHhccccCCCeEEEEEee
Confidence            32111             1112457999999999999999999  4  477777776

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=99.69  E-value=6.2e-18  Score=144.44  Aligned_cols=166  Identities=16%  Similarity=0.116  Sum_probs=116.3

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC-------EEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY-------RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE  143 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~-------~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~  143 (248)
                      ++|+||||+|+||++++..|+++|+       +|+++|+... .+.......++...  .+.++ .|+.+.+++.+.++ 
T Consensus         5 mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~-~~~~~g~~~dl~~~--~~~~~-~di~~~~~~~~a~~-   79 (327)
T 1y7t_A            5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQA-MKALEGVVMELEDC--AFPLL-AGLEATDDPKVAFK-   79 (327)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGG-HHHHHHHHHHHHTT--TCTTE-EEEEEESCHHHHTT-
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCc-hhhccchhhhhhcc--ccccc-CCeEeccChHHHhC-
Confidence            6899999999999999999999996       8999886321 01111111122111  11222 46666556666675 


Q ss_pred             CCCCEEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcC-CC-EEEEeccceecCCCCCCCCC-CCC-CCCCCCh
Q 025786          144 NAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHG-VD-TLIYSSTCATYGEPEKMPIT-EET-PQAPINP  219 (248)
Q Consensus       144 ~~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~-~~-~iV~~SS~~~~g~~~~~~~~-e~~-~~~~~~~  219 (248)
                       ++|+|||+||.....  ..+..+.+..|..++.++++.+.+.+ .+ +++++|+.....    .++. +.. ..+|...
T Consensus        80 -~~D~Vih~Ag~~~~~--~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~~~~----~~~~~~~~~~~~p~~~  152 (327)
T 1y7t_A           80 -DADYALLVGAAPRKA--GMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPANTN----ALIAYKNAPGLNPRNF  152 (327)
T ss_dssp             -TCSEEEECCCCCCCT--TCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHH----HHHHHHTCTTSCGGGE
T ss_pred             -CCCEEEECCCcCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCchhhh----HHHHHHHcCCCChhhe
Confidence             689999999976432  34567789999999999999999875 54 788777643100    0011 112 3456678


Q ss_pred             HHHHHHHHHHHHHHHhhcCCCcEEEEecC
Q 025786          220 YGKAKKMAEDIILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       220 Y~~sK~a~e~l~~~~~~~~gi~~~~v~Pf  248 (248)
                      |+.||...|++...+++.+|++++++|||
T Consensus       153 yg~tkl~~er~~~~~a~~~g~~~~~vr~~  181 (327)
T 1y7t_A          153 TAMTRLDHNRAKAQLAKKTGTGVDRIRRM  181 (327)
T ss_dssp             EECCHHHHHHHHHHHHHHHTCCGGGEECC
T ss_pred             eccchHHHHHHHHHHHHHhCcChhheeee
Confidence            99999999999999999999999999875

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=99.58  E-value=6.4e-14  Score=120.17  Aligned_cols=88  Identities=16%  Similarity=0.006  Sum_probs=67.8

Q ss_pred             CceEEEEecCCchhHHHHHHHHH-HCCCEEEEEecCCCCcchh---------hhhhhhhcCCCCceEEEEccCCCHHHHH
Q 025786           69 GVTHVLVTGGAGYIGSHAALRLL-KDSYRVTIVDNLSRGNIGA---------VKVLQELFPEPGRLQFIYADLGDAKAVN  138 (248)
Q Consensus        69 ~~k~vlITGasg~IG~~la~~L~-~~G~~V~~~~r~~~~~~~~---------~~~~~~~~~~~~~~~~~~~Dl~~~~~~~  138 (248)
                      +.|++||||||+|||++++..|+ ..|+.|+++.+.....++.         ....+.....+.++..+.||++|.++++
T Consensus        49 ~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e~i~  128 (401)
T 4ggo_A           49 APKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDEIKA  128 (401)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHHHHH
Confidence            34999999999999999999998 6899999888654332211         1111222233568899999999999999


Q ss_pred             HHhhc-----CCCCEEEEccccc
Q 025786          139 KFFSE-----NAFDAVMHFAAVA  156 (248)
Q Consensus       139 ~~~~~-----~~iD~li~~Ag~~  156 (248)
                      +++++     +++|+|||++|..
T Consensus       129 ~vi~~i~~~~G~IDiLVhS~A~~  151 (401)
T 4ggo_A          129 QVIEEAKKKGIKFDLIVYSLASP  151 (401)
T ss_dssp             HHHHHHHHTTCCEEEEEECCCCS
T ss_pred             HHHHHHHHhcCCCCEEEEecccc
Confidence            98876     7999999999965

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=99.21  E-value=2.2e-11  Score=101.92  Aligned_cols=80  Identities=15%  Similarity=0.166  Sum_probs=62.5

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li  150 (248)
                      |+++||||+||||++++..|+++|++|++++|+..+.++..+.+...    .++.++.+|++|.+++.++++  .+|+||
T Consensus       120 k~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~----~~~~~~~~D~~~~~~~~~~~~--~~DvlV  193 (287)
T 1lu9_A          120 KKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKR----FKVNVTAAETADDASRAEAVK--GAHFVF  193 (287)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH----HTCCCEEEECCSHHHHHHHTT--TCSEEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhc----CCcEEEEecCCCHHHHHHHHH--hCCEEE
Confidence            89999999999999999999999999999987543332222222211    135667899999999998887  589999


Q ss_pred             Eccccc
Q 025786          151 HFAAVA  156 (248)
Q Consensus       151 ~~Ag~~  156 (248)
                      ||||..
T Consensus       194 n~ag~g  199 (287)
T 1lu9_A          194 TAGAIG  199 (287)
T ss_dssp             ECCCTT
T ss_pred             ECCCcc
Confidence            999864

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=99.21  E-value=8e-11  Score=84.59  Aligned_cols=93  Identities=25%  Similarity=0.250  Sum_probs=69.8

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCC-CEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDS-YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~  148 (248)
                      +++|+|+|+ |++|+++++.|.++| ++|++++|+..+   ... ..     ...+.++.+|+++.+++.++++  ++|+
T Consensus         5 ~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~---~~~-~~-----~~~~~~~~~d~~~~~~~~~~~~--~~d~   72 (118)
T 3ic5_A            5 RWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAA---LAV-LN-----RMGVATKQVDAKDEAGLAKALG--GFDA   72 (118)
T ss_dssp             CEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHH---HHH-HH-----TTTCEEEECCTTCHHHHHHHTT--TCSE
T ss_pred             cCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHH---HHH-HH-----hCCCcEEEecCCCHHHHHHHHc--CCCE
Confidence            489999999 999999999999999 899999864322   111 11     2356778999999999999887  6899


Q ss_pred             EEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEE
Q 025786          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI  192 (248)
Q Consensus       149 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV  192 (248)
                      |||+++..                  .+..++..+.+.+..++.
T Consensus        73 vi~~~~~~------------------~~~~~~~~~~~~g~~~~~   98 (118)
T 3ic5_A           73 VISAAPFF------------------LTPIIAKAAKAAGAHYFD   98 (118)
T ss_dssp             EEECSCGG------------------GHHHHHHHHHHTTCEEEC
T ss_pred             EEECCCch------------------hhHHHHHHHHHhCCCEEE
Confidence            99998521                  134566777777764444

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=98.98  E-value=1.7e-09  Score=86.77  Aligned_cols=74  Identities=20%  Similarity=0.195  Sum_probs=55.8

Q ss_pred             ceEEEEecC----------------CchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCC
Q 025786           70 VTHVLVTGG----------------AGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD  133 (248)
Q Consensus        70 ~k~vlITGa----------------sg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~  133 (248)
                      +|+||||||                ||+||.++|+.|+++|++|+++++.. ..+          . +..+  -.+|+++
T Consensus         8 gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~-~l~----------~-~~g~--~~~dv~~   73 (226)
T 1u7z_A            8 HLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPV-SLP----------T-PPFV--KRVDVMT   73 (226)
T ss_dssp             TCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSC-CCC----------C-CTTE--EEEECCS
T ss_pred             CCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCc-ccc----------c-CCCC--eEEccCc
Confidence            399999999                69999999999999999999987532 110          0 1122  3568888


Q ss_pred             HHHHHHHhhc--CCCCEEEEcccccc
Q 025786          134 AKAVNKFFSE--NAFDAVMHFAAVAY  157 (248)
Q Consensus       134 ~~~~~~~~~~--~~iD~li~~Ag~~~  157 (248)
                      .+++.+.+.+  +++|++|||||+..
T Consensus        74 ~~~~~~~v~~~~~~~Dili~~Aav~d   99 (226)
T 1u7z_A           74 ALEMEAAVNASVQQQNIFIGCAAVAD   99 (226)
T ss_dssp             HHHHHHHHHHHGGGCSEEEECCBCCS
T ss_pred             HHHHHHHHHHhcCCCCEEEECCcccC
Confidence            8776555543  57999999999864

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=98.96  E-value=1.1e-09  Score=93.33  Aligned_cols=162  Identities=12%  Similarity=0.043  Sum_probs=99.3

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC-------EEEEEecCCCC-cchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhh
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY-------RVTIVDNLSRG-NIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFS  142 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~-------~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~  142 (248)
                      ++|+||||+|+||++++..|+.+|.       +|+++|+.... .+.......++......+   ..|+...++..+.++
T Consensus         6 ~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~---~~~i~~~~~~~~al~   82 (329)
T 1b8p_A            6 MRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPL---LAGMTAHADPMTAFK   82 (329)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTT---EEEEEEESSHHHHTT
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcccc---cCcEEEecCcHHHhC
Confidence            6899999999999999999999885       78888753100 111211122221110011   124444445566666


Q ss_pred             cCCCCEEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcC-CC-EEEEeccceecCCCCCCCCCCCC-CCCCCCh
Q 025786          143 ENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHG-VD-TLIYSSTCATYGEPEKMPITEET-PQAPINP  219 (248)
Q Consensus       143 ~~~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~-~~-~iV~~SS~~~~g~~~~~~~~e~~-~~~~~~~  219 (248)
                        +.|+|||+||....  ......+.+..|...+..+++.+.+.. +. +||++|.-...-..   ...+.. ..++...
T Consensus        83 --~aD~Vi~~ag~~~~--~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SNPv~~~t~---~~~~~~~~~p~~~v  155 (329)
T 1b8p_A           83 --DADVALLVGARPRG--PGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGNPANTNAY---IAMKSAPSLPAKNF  155 (329)
T ss_dssp             --TCSEEEECCCCCCC--TTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHH---HHHHTCTTSCGGGE
T ss_pred             --CCCEEEEeCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccCchHHHHH---HHHHHcCCCCHHHE
Confidence              68999999996532  233456678889999999999999874 44 88888862210000   000001 1223335


Q ss_pred             HHHHHHHHHHHHHHHhhcCCCcE
Q 025786          220 YGKAKKMAEDIILDFSKNSDMAV  242 (248)
Q Consensus       220 Y~~sK~a~e~l~~~~~~~~gi~~  242 (248)
                      |+.++.-...+...+++..|++.
T Consensus       156 ~g~t~Ld~~r~~~~la~~lgv~~  178 (329)
T 1b8p_A          156 TAMLRLDHNRALSQIAAKTGKPV  178 (329)
T ss_dssp             EECCHHHHHHHHHHHHHHHTCCG
T ss_pred             EEeecHHHHHHHHHHHHHhCcCH
Confidence            77777777777777777766643

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=98.93  E-value=1.6e-08  Score=85.95  Aligned_cols=115  Identities=12%  Similarity=0.121  Sum_probs=78.7

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCC--CEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDS--YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~  148 (248)
                      ++|+||||+|++|..++..|+.+|  .+|+++|+...  +.....+.+.. ....+..    +.+.+++.++++  +.|+
T Consensus         9 mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~--~~~~~dL~~~~-~~~~v~~----~~~t~d~~~al~--gaDv   79 (326)
T 1smk_A            9 FKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNA--PGVTADISHMD-TGAVVRG----FLGQQQLEAALT--GMDL   79 (326)
T ss_dssp             EEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSH--HHHHHHHHTSC-SSCEEEE----EESHHHHHHHHT--TCSE
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCc--HhHHHHhhccc-ccceEEE----EeCCCCHHHHcC--CCCE
Confidence            789999999999999999999999  78999885432  11111111111 1112222    234556767776  6899


Q ss_pred             EEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEecc
Q 025786          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSST  196 (248)
Q Consensus       149 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS  196 (248)
                      |||+||.....  .....+.+..|..++..+++.+.+.++..+|+++|
T Consensus        80 Vi~~ag~~~~~--g~~r~dl~~~N~~~~~~i~~~i~~~~p~~~viv~S  125 (326)
T 1smk_A           80 IIVPAGVPRKP--GMTRDDLFKINAGIVKTLCEGIAKCCPRAIVNLIS  125 (326)
T ss_dssp             EEECCCCCCCS--SCCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEECC
T ss_pred             EEEcCCcCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEEC
Confidence            99999964322  22345667889899999999999987766766666

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=98.91  E-value=2.7e-09  Score=93.44  Aligned_cols=83  Identities=14%  Similarity=0.204  Sum_probs=63.2

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCC---CEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCC
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDS---YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAF  146 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~i  146 (248)
                      |++|+|+|| |+||+++++.|+++|   .+|++++|+..+.+...+.+...  .+.++..+.+|++|.+++++++++.++
T Consensus         1 M~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~--~~~~~~~~~~D~~d~~~l~~~l~~~~~   77 (405)
T 4ina_A            1 MAKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAK--GYGEIDITTVDADSIEELVALINEVKP   77 (405)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHT--TCCCCEEEECCTTCHHHHHHHHHHHCC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhh--cCCceEEEEecCCCHHHHHHHHHhhCC
Confidence            578999998 999999999999998   38999987544333322222211  123578899999999999999986568


Q ss_pred             CEEEEcccc
Q 025786          147 DAVMHFAAV  155 (248)
Q Consensus       147 D~li~~Ag~  155 (248)
                      |+|||||+.
T Consensus        78 DvVin~ag~   86 (405)
T 4ina_A           78 QIVLNIALP   86 (405)
T ss_dssp             SEEEECSCG
T ss_pred             CEEEECCCc
Confidence            999999985

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=98.84  E-value=9.6e-09  Score=82.55  Aligned_cols=75  Identities=21%  Similarity=0.324  Sum_probs=54.2

Q ss_pred             eEEEEecC----------------CchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCH
Q 025786           71 THVLVTGG----------------AGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDA  134 (248)
Q Consensus        71 k~vlITGa----------------sg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~  134 (248)
                      |+||||||                ||++|.++|+.|+++|++|+++++...-..          ..+..+..  .|+.+.
T Consensus         4 k~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~~----------~~~~~~~~--~~v~s~   71 (232)
T 2gk4_A            4 MKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALKP----------EPHPNLSI--REITNT   71 (232)
T ss_dssp             CEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCCC----------CCCTTEEE--EECCSH
T ss_pred             CEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCccccc----------cCCCCeEE--EEHhHH
Confidence            89999999                899999999999999999999986431100          00123433  466666


Q ss_pred             HHHHHHhhc--CCCCEEEEcccccc
Q 025786          135 KAVNKFFSE--NAFDAVMHFAAVAY  157 (248)
Q Consensus       135 ~~~~~~~~~--~~iD~li~~Ag~~~  157 (248)
                      +++.+.+.+  +++|++|||||+..
T Consensus        72 ~em~~~v~~~~~~~Dili~aAAvsD   96 (232)
T 2gk4_A           72 KDLLIEMQERVQDYQVLIHSMAVSD   96 (232)
T ss_dssp             HHHHHHHHHHGGGCSEEEECSBCCS
T ss_pred             HHHHHHHHHhcCCCCEEEEcCcccc
Confidence            655554433  57999999999754

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=98.80  E-value=2.6e-08  Score=84.13  Aligned_cols=160  Identities=13%  Similarity=0.097  Sum_probs=90.3

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC--EEEEEec--CCCCcchhhhhhhhhcCC-CCceEEEEccCCCHHHHHHHhhcCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY--RVTIVDN--LSRGNIGAVKVLQELFPE-PGRLQFIYADLGDAKAVNKFFSENA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~--~V~~~~r--~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~  145 (248)
                      ++|+||||+|++|++++..|+.+|.  ++.++|+  ...+.+.....+.+.... +..+.+...|    +++.+.++  +
T Consensus         1 mKI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~----d~l~~al~--g   74 (313)
T 1hye_A            1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVES----DENLRIID--E   74 (313)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEE----TTCGGGGT--T
T ss_pred             CEEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCC----cchHHHhC--C
Confidence            4799999999999999999999885  6777875  211111101112211111 1122222211    12344454  6


Q ss_pred             CCEEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCCChHHH-HH
Q 025786          146 FDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGK-AK  224 (248)
Q Consensus       146 iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~-sK  224 (248)
                      .|+|||.||....  ......+.+..|..++..+++.+.+.+ .++|+++|.-+-....  ........++...+|. +.
T Consensus        75 aD~Vi~~Ag~~~~--~g~~r~dl~~~N~~i~~~i~~~i~~~~-~~~vlv~SNPv~~~t~--~~~k~~~~p~~rviG~gt~  149 (313)
T 1hye_A           75 SDVVIITSGVPRK--EGMSRMDLAKTNAKIVGKYAKKIAEIC-DTKIFVITNPVDVMTY--KALVDSKFERNQVFGLGTH  149 (313)
T ss_dssp             CSEEEECCSCCCC--TTCCHHHHHHHHHHHHHHHHHHHHHHC-CCEEEECSSSHHHHHH--HHHHHHCCCTTSEEECTTH
T ss_pred             CCEEEECCCCCCC--CCCcHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEecCcHHHHHH--HHHHhhCcChhcEEEeCcc
Confidence            8999999996532  223446678899999999999999988 7677766621100000  0000012333445555 55


Q ss_pred             HHHHHHHHHHhhcCCCc
Q 025786          225 KMAEDIILDFSKNSDMA  241 (248)
Q Consensus       225 ~a~e~l~~~~~~~~gi~  241 (248)
                      .-...+...+++..|++
T Consensus       150 LD~~r~~~~la~~lgv~  166 (313)
T 1hye_A          150 LDSLRFKVAIAKFFGVH  166 (313)
T ss_dssp             HHHHHHHHHHHHHHTCC
T ss_pred             HHHHHHHHHHHHHhCcC
Confidence            54555555555555543

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=98.74  E-value=6.2e-08  Score=81.46  Aligned_cols=115  Identities=16%  Similarity=0.133  Sum_probs=74.5

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC--EEEEEec--CCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY--RVTIVDN--LSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAF  146 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~--~V~~~~r--~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~i  146 (248)
                      ++|+||||+|++|..++..|+.+|.  +++++|+  ...+.+.....+.+.......+.+.. |  +.    +.++  +.
T Consensus         1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~-~--~~----~a~~--~a   71 (303)
T 1o6z_A            1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQ-G--GY----EDTA--GS   71 (303)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEE-C--CG----GGGT--TC
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEe-C--CH----HHhC--CC
Confidence            4799999999999999999999885  6888875  22111111111222111122333332 2  22    2343  68


Q ss_pred             CEEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEecc
Q 025786          147 DAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSST  196 (248)
Q Consensus       147 D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS  196 (248)
                      |+|||+||....  ......+.+..|..++..+++.+.+.++..+|+++|
T Consensus        72 DvVi~~ag~~~~--~g~~r~dl~~~N~~i~~~i~~~i~~~~p~~~viv~S  119 (303)
T 1o6z_A           72 DVVVITAGIPRQ--PGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTS  119 (303)
T ss_dssp             SEEEECCCCCCC--TTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECC
T ss_pred             CEEEEcCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEeC
Confidence            999999996432  123445678889999999999999987777777666

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.72  E-value=5.7e-08  Score=86.08  Aligned_cols=77  Identities=21%  Similarity=0.227  Sum_probs=59.1

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~l  149 (248)
                      +++|+||| +|++|+++++.|++.|++|++++|+..   ...+    +......+..+.+|++|.+++.++++  ++|+|
T Consensus         3 ~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~---~a~~----la~~~~~~~~~~~Dv~d~~~l~~~l~--~~DvV   72 (450)
T 1ff9_A            3 TKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLE---SAKK----LSAGVQHSTPISLDVNDDAALDAEVA--KHDLV   72 (450)
T ss_dssp             CCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHH---HHHH----TTTTCTTEEEEECCTTCHHHHHHHHT--TSSEE
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHH---HHHH----HHHhcCCceEEEeecCCHHHHHHHHc--CCcEE
Confidence            37899998 899999999999999999999986432   2211    11111246788999999999988886  69999


Q ss_pred             EEccccc
Q 025786          150 MHFAAVA  156 (248)
Q Consensus       150 i~~Ag~~  156 (248)
                      |||++..
T Consensus        73 In~a~~~   79 (450)
T 1ff9_A           73 ISLIPYT   79 (450)
T ss_dssp             EECCC--
T ss_pred             EECCccc
Confidence            9999863

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=98.71  E-value=8.3e-08  Score=70.96  Aligned_cols=101  Identities=11%  Similarity=0.081  Sum_probs=67.8

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHH-hhcCCCCE
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKF-FSENAFDA  148 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~~iD~  148 (248)
                      +++|+|+|+ |.+|+.+++.|.+.|++|++++++...   .    +....  .....+.+|.++.+.+.++ ++  ++|+
T Consensus         6 ~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~---~----~~~~~--~~~~~~~~d~~~~~~l~~~~~~--~~d~   73 (144)
T 2hmt_A            6 NKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEK---V----NAYAS--YATHAVIANATEENELLSLGIR--NFEY   73 (144)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHH---H----HTTTT--TCSEEEECCTTCHHHHHTTTGG--GCSE
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHH---H----HHHHH--hCCEEEEeCCCCHHHHHhcCCC--CCCE
Confidence            378999998 999999999999999999999863211   1    11111  1245678999998877665 33  6899


Q ss_pred             EEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccce
Q 025786          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCA  198 (248)
Q Consensus       149 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~  198 (248)
                      ||++++..            ..    .+..+...+++.+.+++|..++..
T Consensus        74 vi~~~~~~------------~~----~~~~~~~~~~~~~~~~ii~~~~~~  107 (144)
T 2hmt_A           74 VIVAIGAN------------IQ----ASTLTTLLLKELDIPNIWVKAQNY  107 (144)
T ss_dssp             EEECCCSC------------HH----HHHHHHHHHHHTTCSEEEEECCSH
T ss_pred             EEECCCCc------------hH----HHHHHHHHHHHcCCCeEEEEeCCH
Confidence            99987621            01    122344455566666777766543

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=98.53  E-value=8.4e-08  Score=72.83  Aligned_cols=77  Identities=16%  Similarity=0.096  Sum_probs=54.0

Q ss_pred             CchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCH--HHHHHHhhc-----CCCCEEEE
Q 025786           79 AGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDA--KAVNKFFSE-----NAFDAVMH  151 (248)
Q Consensus        79 sg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~--~~~~~~~~~-----~~iD~li~  151 (248)
                      ++.++.++++.|+++|++|++..|.........+..+.....+.++..+++|++++  ++++++++.     ++ |+|||
T Consensus        25 s~~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~~G~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~G~-dVLVn  103 (157)
T 3gxh_A           25 SGLPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQAGMDYVYIPVDWQNPKVEDVEAFFAAMDQHKGK-DVLVH  103 (157)
T ss_dssp             EBCCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHHTTCEEEECCCCTTSCCHHHHHHHHHHHHHTTTS-CEEEE
T ss_pred             cCCCCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHHcCCeEEEecCCCCCCCHHHHHHHHHHHHhcCCC-CEEEE
Confidence            35789999999999999999987644322211111111212245678889999998  888887764     56 99999


Q ss_pred             ccccc
Q 025786          152 FAAVA  156 (248)
Q Consensus       152 ~Ag~~  156 (248)
                      |||..
T Consensus       104 nAgg~  108 (157)
T 3gxh_A          104 CLANY  108 (157)
T ss_dssp             CSBSH
T ss_pred             CCCCC
Confidence            99953

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=98.50  E-value=2.3e-07  Score=68.75  Aligned_cols=74  Identities=18%  Similarity=0.163  Sum_probs=55.3

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~l  149 (248)
                      |++++|+|+ |.+|+++++.|.++|++|+++++++..   . +...+     ..+.++.+|.++++.++++- ..+.|+|
T Consensus         6 ~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~---~-~~~~~-----~~~~~~~gd~~~~~~l~~~~-~~~~d~v   74 (141)
T 3llv_A            6 RYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEK---I-ELLED-----EGFDAVIADPTDESFYRSLD-LEGVSAV   74 (141)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHH---H-HHHHH-----TTCEEEECCTTCHHHHHHSC-CTTCSEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHH---H-HHHHH-----CCCcEEECCCCCHHHHHhCC-cccCCEE
Confidence            478999997 889999999999999999999864321   1 11121     13677899999998887652 2368999


Q ss_pred             EEccc
Q 025786          150 MHFAA  154 (248)
Q Consensus       150 i~~Ag  154 (248)
                      |.+.+
T Consensus        75 i~~~~   79 (141)
T 3llv_A           75 LITGS   79 (141)
T ss_dssp             EECCS
T ss_pred             EEecC
Confidence            97654

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=98.50  E-value=1.6e-07  Score=73.76  Aligned_cols=74  Identities=16%  Similarity=0.148  Sum_probs=50.3

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhh---cCCCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFS---ENAFD  147 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---~~~iD  147 (248)
                      ++|+||||+|+||..+++.+...|++|++++++..+    .+..+++   +...   ..|.++.+..+.+.+   ..++|
T Consensus        40 ~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~----~~~~~~~---g~~~---~~d~~~~~~~~~~~~~~~~~~~D  109 (198)
T 1pqw_A           40 ERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAK----REMLSRL---GVEY---VGDSRSVDFADEILELTDGYGVD  109 (198)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHH----HHHHHTT---CCSE---EEETTCSTHHHHHHHHTTTCCEE
T ss_pred             CEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHH----HHHHHHc---CCCE---EeeCCcHHHHHHHHHHhCCCCCe
Confidence            899999999999999999999999999998864221    1222222   1121   246665443333332   24699


Q ss_pred             EEEEccc
Q 025786          148 AVMHFAA  154 (248)
Q Consensus       148 ~li~~Ag  154 (248)
                      ++|||+|
T Consensus       110 ~vi~~~g  116 (198)
T 1pqw_A          110 VVLNSLA  116 (198)
T ss_dssp             EEEECCC
T ss_pred             EEEECCc
Confidence            9999987

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=98.46  E-value=6.2e-07  Score=79.66  Aligned_cols=76  Identities=20%  Similarity=0.265  Sum_probs=59.2

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHC-CCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKD-SYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~  148 (248)
                      +++|+|+|+ |++|++++..|++. |++|++++|+..+   +.+..+.     ..+..+.+|+.|.+++.++++  ++|+
T Consensus        23 ~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~k---a~~la~~-----~~~~~~~~D~~d~~~l~~~l~--~~Dv   91 (467)
T 2axq_A           23 GKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLAN---AQALAKP-----SGSKAISLDVTDDSALDKVLA--DNDV   91 (467)
T ss_dssp             CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHH---HHHHHGG-----GTCEEEECCTTCHHHHHHHHH--TSSE
T ss_pred             CCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHH---HHHHHHh-----cCCcEEEEecCCHHHHHHHHc--CCCE
Confidence            489999997 99999999999998 7899999864322   2222111     135667899999999988887  6899


Q ss_pred             EEEccccc
Q 025786          149 VMHFAAVA  156 (248)
Q Consensus       149 li~~Ag~~  156 (248)
                      |||+++..
T Consensus        92 VIn~tp~~   99 (467)
T 2axq_A           92 VISLIPYT   99 (467)
T ss_dssp             EEECSCGG
T ss_pred             EEECCchh
Confidence            99999864

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=98.37  E-value=8.1e-06  Score=59.75  Aligned_cols=74  Identities=15%  Similarity=0.098  Sum_probs=52.8

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li  150 (248)
                      |+|+|+|+ |.+|..+++.|.+.|++|++++++..   ...+ +.+.    ..+.++.+|.++.+.+.+..- .+.|+||
T Consensus         5 m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~---~~~~-~~~~----~~~~~~~~d~~~~~~l~~~~~-~~~d~vi   74 (140)
T 1lss_A            5 MYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKD---ICKK-ASAE----IDALVINGDCTKIKTLEDAGI-EDADMYI   74 (140)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHH---HHHH-HHHH----CSSEEEESCTTSHHHHHHTTT-TTCSEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHH---HHHH-HHHh----cCcEEEEcCCCCHHHHHHcCc-ccCCEEE
Confidence            67999986 99999999999999999999986322   1111 1111    135567889998887765411 2689999


Q ss_pred             Eccc
Q 025786          151 HFAA  154 (248)
Q Consensus       151 ~~Ag  154 (248)
                      ++.+
T Consensus        75 ~~~~   78 (140)
T 1lss_A           75 AVTG   78 (140)
T ss_dssp             ECCS
T ss_pred             EeeC
Confidence            9864

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=98.35  E-value=3.3e-07  Score=77.83  Aligned_cols=74  Identities=14%  Similarity=0.145  Sum_probs=51.0

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc---CCCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE---NAFD  147 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~---~~iD  147 (248)
                      ++|+||||+|+||..+++.+...|++|++++++..+   . +..+++.   ..   ..+|.++.+++.+.+.+   +++|
T Consensus       147 ~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~---~-~~~~~~g---~~---~~~d~~~~~~~~~~~~~~~~~~~d  216 (333)
T 1v3u_A          147 ETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEK---I-AYLKQIG---FD---AAFNYKTVNSLEEALKKASPDGYD  216 (333)
T ss_dssp             CEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHH---H-HHHHHTT---CS---EEEETTSCSCHHHHHHHHCTTCEE
T ss_pred             CEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHH---H-HHHHhcC---Cc---EEEecCCHHHHHHHHHHHhCCCCe
Confidence            899999999999999999999999999999864322   2 2223331   11   23466653333333322   5799


Q ss_pred             EEEEccc
Q 025786          148 AVMHFAA  154 (248)
Q Consensus       148 ~li~~Ag  154 (248)
                      ++|+|+|
T Consensus       217 ~vi~~~g  223 (333)
T 1v3u_A          217 CYFDNVG  223 (333)
T ss_dssp             EEEESSC
T ss_pred             EEEECCC
Confidence            9999998

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=98.34  E-value=2.6e-06  Score=73.40  Aligned_cols=71  Identities=20%  Similarity=0.229  Sum_probs=55.0

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li  150 (248)
                      |+|+|.|| |++|+.+++.|.+ .++|.+.+++.++.       +..   ...+..+.+|+.|.+++.++++  +.|+||
T Consensus        17 mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~-------~~~---~~~~~~~~~d~~d~~~l~~~~~--~~DvVi   82 (365)
T 3abi_A           17 MKVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENL-------EKV---KEFATPLKVDASNFDKLVEVMK--EFELVI   82 (365)
T ss_dssp             CEEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHH-------HHH---TTTSEEEECCTTCHHHHHHHHT--TCSEEE
T ss_pred             cEEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHH-------HHH---hccCCcEEEecCCHHHHHHHHh--CCCEEE
Confidence            57999998 9999999998865 58999988643221       112   1245678899999999999988  679999


Q ss_pred             Ecccc
Q 025786          151 HFAAV  155 (248)
Q Consensus       151 ~~Ag~  155 (248)
                      |+++.
T Consensus        83 ~~~p~   87 (365)
T 3abi_A           83 GALPG   87 (365)
T ss_dssp             ECCCG
T ss_pred             EecCC
Confidence            98863

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=98.25  E-value=5.7e-06  Score=69.67  Aligned_cols=82  Identities=12%  Similarity=0.144  Sum_probs=56.6

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC-EEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~l  149 (248)
                      ++++|+|+ ||+|++++..|++.|+ +|++++|+....+++.+..+++.... ...+...++.+.+++.+.+.  ..|+|
T Consensus       155 k~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~-~~~~~~~~~~~~~~l~~~l~--~aDiI  230 (315)
T 3tnl_A          155 KKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKT-DCKAQLFDIEDHEQLRKEIA--ESVIF  230 (315)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHS-SCEEEEEETTCHHHHHHHHH--TCSEE
T ss_pred             CEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhc-CCceEEeccchHHHHHhhhc--CCCEE
Confidence            89999997 8999999999999999 89999986322333333333321111 13334456777777777766  57999


Q ss_pred             EEccccc
Q 025786          150 MHFAAVA  156 (248)
Q Consensus       150 i~~Ag~~  156 (248)
                      ||+....
T Consensus       231 INaTp~G  237 (315)
T 3tnl_A          231 TNATGVG  237 (315)
T ss_dssp             EECSSTT
T ss_pred             EECccCC
Confidence            9987653

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=98.24  E-value=5e-06  Score=70.63  Aligned_cols=117  Identities=15%  Similarity=0.090  Sum_probs=73.6

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC--E-----EEEEecCCCCcchhhhhhhhhcC-CCCceEEEEccCCCHHHHHHHhh
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY--R-----VTIVDNLSRGNIGAVKVLQELFP-EPGRLQFIYADLGDAKAVNKFFS  142 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~--~-----V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~  142 (248)
                      ++|.||||+|+||.+++..|+..|.  +     ++++|+... .+.+.....++.. ...-..-+.  +.  ++..+.++
T Consensus         4 ~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~-~~~~~g~a~DL~~~~~~~~~~~~--~~--~~~~~~~~   78 (333)
T 5mdh_A            4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPM-MGVLDGVLMELQDCALPLLKDVI--AT--DKEEIAFK   78 (333)
T ss_dssp             EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGG-HHHHHHHHHHHHHTCCTTEEEEE--EE--SCHHHHTT
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCc-cccchhhHhhhHhhhhcccCCEE--Ec--CCcHHHhC
Confidence            7899999999999999999998875  5     888885321 1111111122211 001111111  11  12233344


Q ss_pred             cCCCCEEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCC--EEEEecc
Q 025786          143 ENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD--TLIYSST  196 (248)
Q Consensus       143 ~~~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~--~iV~~SS  196 (248)
                        +.|+||+.||....  ...+..+.++.|......+++.+.+.+.+  +++.+|.
T Consensus        79 --daDvVvitAg~prk--pG~tR~dll~~N~~i~~~i~~~i~~~~~~~~~vivvsN  130 (333)
T 5mdh_A           79 --DLDVAILVGSMPRR--DGMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVGN  130 (333)
T ss_dssp             --TCSEEEECCSCCCC--TTCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred             --CCCEEEEeCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCC
Confidence              68999999986432  23355677888999999999999988754  5777665

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=98.22  E-value=1.4e-06  Score=73.67  Aligned_cols=74  Identities=9%  Similarity=0.011  Sum_probs=50.6

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHh---hcCCCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFF---SENAFD  147 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~---~~~~iD  147 (248)
                      ++|+||||+|+||..+++.+...|++|++++++..+    .+..+++.   ...   ..|.++.+..+++.   ...++|
T Consensus       142 ~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~----~~~~~~~g---~~~---~~~~~~~~~~~~~~~~~~~~~~D  211 (327)
T 1qor_A          142 EQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQK----AQSALKAG---AWQ---VINYREEDLVERLKEITGGKKVR  211 (327)
T ss_dssp             CEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHH----HHHHHHHT---CSE---EEETTTSCHHHHHHHHTTTCCEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHH----HHHHHHcC---CCE---EEECCCccHHHHHHHHhCCCCce
Confidence            899999999999999999999999999999864322    12223331   121   23555544333333   224699


Q ss_pred             EEEEccc
Q 025786          148 AVMHFAA  154 (248)
Q Consensus       148 ~li~~Ag  154 (248)
                      ++|+|+|
T Consensus       212 ~vi~~~g  218 (327)
T 1qor_A          212 VVYDSVG  218 (327)
T ss_dssp             EEEECSC
T ss_pred             EEEECCc
Confidence            9999998

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=98.22  E-value=2.6e-05  Score=58.59  Aligned_cols=73  Identities=18%  Similarity=0.155  Sum_probs=53.0

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHH-hhcCCCCEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKF-FSENAFDAV  149 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~~iD~l  149 (248)
                      ++|+|.|+ |.+|..+++.|.+.|++|++++++....+       .+.. ......+..|..+.+.+.+. ++  +.|+|
T Consensus        20 ~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~-------~~~~-~~g~~~~~~d~~~~~~l~~~~~~--~ad~V   88 (155)
T 2g1u_A           20 KYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFH-------RLNS-EFSGFTVVGDAAEFETLKECGME--KADMV   88 (155)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGG-------GSCT-TCCSEEEESCTTSHHHHHTTTGG--GCSEE
T ss_pred             CcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHH-------HHHh-cCCCcEEEecCCCHHHHHHcCcc--cCCEE
Confidence            78999985 99999999999999999999986543221       1110 11345677898888776654 33  58999


Q ss_pred             EEccc
Q 025786          150 MHFAA  154 (248)
Q Consensus       150 i~~Ag  154 (248)
                      |.+.+
T Consensus        89 i~~~~   93 (155)
T 2g1u_A           89 FAFTN   93 (155)
T ss_dssp             EECSS
T ss_pred             EEEeC
Confidence            98765

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=98.22  E-value=1.8e-05  Score=66.68  Aligned_cols=113  Identities=18%  Similarity=0.157  Sum_probs=73.1

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCC--CEEEEEecCCCCcchhhhhhhhhcCC--CCceEEEEccCCCHHHHHHHhhcCCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDS--YRVTIVDNLSRGNIGAVKVLQELFPE--PGRLQFIYADLGDAKAVNKFFSENAF  146 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~i  146 (248)
                      ++|.|+||+|++|..++..|+.+|  .+|+++|+..  .+   ....++...  ..++....    ..++.+++++  +.
T Consensus         1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~--~~---~~a~dL~~~~~~~~l~~~~----~t~d~~~a~~--~a   69 (314)
T 1mld_A            1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH--TP---GVAADLSHIETRATVKGYL----GPEQLPDCLK--GC   69 (314)
T ss_dssp             CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS--HH---HHHHHHTTSSSSCEEEEEE----SGGGHHHHHT--TC
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc--cH---HHHHHHhccCcCceEEEec----CCCCHHHHhC--CC
Confidence            479999999999999999999988  7899999754  11   111222111  11222221    1134455555  68


Q ss_pred             CEEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCC-CEEEEecc
Q 025786          147 DAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV-DTLIYSST  196 (248)
Q Consensus       147 D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~-~~iV~~SS  196 (248)
                      |+||+.||.....  .....+.+..|......+.+.+.+..+ .+||++|-
T Consensus        70 DvVvi~ag~~~~~--g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~sN  118 (314)
T 1mld_A           70 DVVVIPAGVPRKP--GMTRDDLFNTNATIVATLTAACAQHCPDAMICIISN  118 (314)
T ss_dssp             SEEEECCSCCCCT--TCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSS
T ss_pred             CEEEECCCcCCCC--CCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECC
Confidence            9999999975322  223345677888888888888887654 47777654

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=98.22  E-value=1.9e-06  Score=73.58  Aligned_cols=75  Identities=20%  Similarity=0.288  Sum_probs=51.6

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc---CCCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE---NAFD  147 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~---~~iD  147 (248)
                      ++|+|||++|+||..+++.+...|++|++++++..+.    +..+++.   ..   ...|+++.+++.+.+.+   +++|
T Consensus       171 ~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~----~~~~~~g---~~---~~~d~~~~~~~~~~~~~~~~~~~D  240 (347)
T 2hcy_A          171 HWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKE----ELFRSIG---GE---VFIDFTKEKDIVGAVLKATDGGAH  240 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHH----HHHHHTT---CC---EEEETTTCSCHHHHHHHHHTSCEE
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHH----HHHHHcC---Cc---eEEecCccHhHHHHHHHHhCCCCC
Confidence            8999999999999999999999999999998643322    2223331   11   22466643344333332   3799


Q ss_pred             EEEEcccc
Q 025786          148 AVMHFAAV  155 (248)
Q Consensus       148 ~li~~Ag~  155 (248)
                      ++|+++|.
T Consensus       241 ~vi~~~g~  248 (347)
T 2hcy_A          241 GVINVSVS  248 (347)
T ss_dssp             EEEECSSC
T ss_pred             EEEECCCc
Confidence            99999983

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=98.21  E-value=1.8e-06  Score=73.20  Aligned_cols=75  Identities=13%  Similarity=0.031  Sum_probs=50.9

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHH---HHHHhhcCCCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKA---VNKFFSENAFD  147 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~---~~~~~~~~~iD  147 (248)
                      ++|+||||+|+||..+++.+...|++|++++++..+    .+..+++.   ...   ..|.++.+.   +.+.....++|
T Consensus       147 ~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~----~~~~~~~g---~~~---~~d~~~~~~~~~i~~~~~~~~~d  216 (333)
T 1wly_A          147 DYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEK----AETARKLG---CHH---TINYSTQDFAEVVREITGGKGVD  216 (333)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHH----HHHHHHHT---CSE---EEETTTSCHHHHHHHHHTTCCEE
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHH----HHHHHHcC---CCE---EEECCCHHHHHHHHHHhCCCCCe
Confidence            899999999999999999999999999999864322    12223332   121   235554333   33333234699


Q ss_pred             EEEEcccc
Q 025786          148 AVMHFAAV  155 (248)
Q Consensus       148 ~li~~Ag~  155 (248)
                      ++|+|+|.
T Consensus       217 ~vi~~~g~  224 (333)
T 1wly_A          217 VVYDSIGK  224 (333)
T ss_dssp             EEEECSCT
T ss_pred             EEEECCcH
Confidence            99999983

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=98.16  E-value=2.9e-06  Score=72.65  Aligned_cols=75  Identities=11%  Similarity=0.045  Sum_probs=50.9

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHH---HHHHhhcCCCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKA---VNKFFSENAFD  147 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~---~~~~~~~~~iD  147 (248)
                      ++|+||||+|+||..+++.+...|++|++++++..+.    +..+++.   ..   ..+|..+.+.   +.+.....++|
T Consensus       164 ~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~----~~~~~~g---~~---~~~~~~~~~~~~~~~~~~~~~~~d  233 (354)
T 2j8z_A          164 DYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKL----QMAEKLG---AA---AGFNYKKEDFSEATLKFTKGAGVN  233 (354)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHH----HHHHHHT---CS---EEEETTTSCHHHHHHHHTTTSCEE
T ss_pred             CEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHH----HHHHHcC---Cc---EEEecCChHHHHHHHHHhcCCCce
Confidence            8999999999999999999999999999998643221    2223332   12   1245554333   33333224699


Q ss_pred             EEEEcccc
Q 025786          148 AVMHFAAV  155 (248)
Q Consensus       148 ~li~~Ag~  155 (248)
                      ++|+|+|.
T Consensus       234 ~vi~~~G~  241 (354)
T 2j8z_A          234 LILDCIGG  241 (354)
T ss_dssp             EEEESSCG
T ss_pred             EEEECCCc
Confidence            99999983

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=98.12  E-value=4.6e-06  Score=71.37  Aligned_cols=74  Identities=18%  Similarity=0.218  Sum_probs=50.5

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHh---hcCCCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFF---SENAFD  147 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~---~~~~iD  147 (248)
                      ++|+||||+|+||..+++.+...|++|++++++..+.    +..+++.   ..   ..+|..+.+..+++.   ...++|
T Consensus       172 ~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~----~~~~~~g---a~---~~~d~~~~~~~~~~~~~~~~~~~D  241 (351)
T 1yb5_A          172 ESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQ----KIVLQNG---AH---EVFNHREVNYIDKIKKYVGEKGID  241 (351)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHH----HHHHHTT---CS---EEEETTSTTHHHHHHHHHCTTCEE
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHH----HHHHHcC---CC---EEEeCCCchHHHHHHHHcCCCCcE
Confidence            8999999999999999999999999999988643221    2223331   11   124555543333332   223699


Q ss_pred             EEEEccc
Q 025786          148 AVMHFAA  154 (248)
Q Consensus       148 ~li~~Ag  154 (248)
                      ++|+|+|
T Consensus       242 ~vi~~~G  248 (351)
T 1yb5_A          242 IIIEMLA  248 (351)
T ss_dssp             EEEESCH
T ss_pred             EEEECCC
Confidence            9999998

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=98.10  E-value=1.9e-05  Score=59.17  Aligned_cols=76  Identities=21%  Similarity=0.343  Sum_probs=55.2

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHH-hhcCCCCEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKF-FSENAFDAV  149 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~~iD~l  149 (248)
                      ++++|.|+ |.+|+.+++.|.+.|++|+++++...  +. .+.+.+..  ...+.++.+|.++++.+.++ ++  +.|+|
T Consensus         4 ~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~--~~-~~~~~~~~--~~~~~~i~gd~~~~~~l~~a~i~--~ad~v   75 (153)
T 1id1_A            4 DHFIVCGH-SILAINTILQLNQRGQNVTVISNLPE--DD-IKQLEQRL--GDNADVIPGDSNDSSVLKKAGID--RCRAI   75 (153)
T ss_dssp             SCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCH--HH-HHHHHHHH--CTTCEEEESCTTSHHHHHHHTTT--TCSEE
T ss_pred             CcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCCh--HH-HHHHHHhh--cCCCeEEEcCCCCHHHHHHcChh--hCCEE
Confidence            57899985 99999999999999999999986321  11 11122211  23478899999999988776 44  67999


Q ss_pred             EEccc
Q 025786          150 MHFAA  154 (248)
Q Consensus       150 i~~Ag  154 (248)
                      |.+.+
T Consensus        76 i~~~~   80 (153)
T 1id1_A           76 LALSD   80 (153)
T ss_dssp             EECSS
T ss_pred             EEecC
Confidence            87653

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=98.06  E-value=2.2e-06  Score=70.84  Aligned_cols=73  Identities=16%  Similarity=0.241  Sum_probs=48.3

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li  150 (248)
                      ++++|+|+ |++|++++..|++.|++|++++|+..+.   .+..+++... ..+  ...|+   +++.+    +++|+||
T Consensus       120 k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~---~~la~~~~~~-~~~--~~~~~---~~~~~----~~~DivV  185 (271)
T 1nyt_A          120 LRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRA---EELAKLFAHT-GSI--QALSM---DELEG----HEFDLII  185 (271)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHH---HHHHHHTGGG-SSE--EECCS---GGGTT----CCCSEEE
T ss_pred             CEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHH---HHHHHHhhcc-CCe--eEecH---HHhcc----CCCCEEE
Confidence            89999998 8999999999999999999998654332   2222222111 122  12333   22221    4789999


Q ss_pred             Ecccccc
Q 025786          151 HFAAVAY  157 (248)
Q Consensus       151 ~~Ag~~~  157 (248)
                      |+++...
T Consensus       186 n~t~~~~  192 (271)
T 1nyt_A          186 NATSSGI  192 (271)
T ss_dssp             ECCSCGG
T ss_pred             ECCCCCC
Confidence            9998754

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.05  E-value=1.3e-05  Score=69.01  Aligned_cols=103  Identities=20%  Similarity=0.187  Sum_probs=65.3

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li  150 (248)
                      ++|+|+|+ |+||+.+++.+...|++|++++++..+   .....+..   +..   +.+|.++.+++.+.+.  +.|+||
T Consensus       167 ~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~---~~~~~~~~---g~~---~~~~~~~~~~l~~~~~--~~DvVi  234 (369)
T 2eez_A          167 ASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKR---LQYLDDVF---GGR---VITLTATEANIKKSVQ--HADLLI  234 (369)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHH---HHHHHHHT---TTS---EEEEECCHHHHHHHHH--HCSEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHH---HHHHHHhc---Cce---EEEecCCHHHHHHHHh--CCCEEE
Confidence            89999999 999999999999999999999864322   21111112   112   4567788888888886  589999


Q ss_pred             EcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccce
Q 025786          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCA  198 (248)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~  198 (248)
                      ++++......    +       ...+...++.|+  ..+.||++|+..
T Consensus       235 ~~~g~~~~~~----~-------~li~~~~l~~mk--~gg~iV~v~~~~  269 (369)
T 2eez_A          235 GAVLVPGAKA----P-------KLVTRDMLSLMK--EGAVIVDVAVDQ  269 (369)
T ss_dssp             ECCC------------------CCSCHHHHTTSC--TTCEEEECC---
T ss_pred             ECCCCCcccc----c-------hhHHHHHHHhhc--CCCEEEEEecCC
Confidence            9998542100    0       001223444453  246899998754

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=98.01  E-value=1.3e-05  Score=68.63  Aligned_cols=73  Identities=16%  Similarity=0.083  Sum_probs=49.0

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC-EEEEEecCCCCcchhhhhhhh-hcCCCCceEEEEccCCCHH---HHHHHhhcCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQE-LFPEPGRLQFIYADLGDAK---AVNKFFSENA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~~Dl~~~~---~~~~~~~~~~  145 (248)
                      ++|+||||+|+||..+++.+...|+ +|++++++..   .. +...+ +   +..   ..+|..+.+   .+.+... ++
T Consensus       162 ~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~---~~-~~~~~~~---g~~---~~~d~~~~~~~~~~~~~~~-~~  230 (357)
T 2zb4_A          162 KTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHE---KC-ILLTSEL---GFD---AAINYKKDNVAEQLRESCP-AG  230 (357)
T ss_dssp             CEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHH---HH-HHHHHTS---CCS---EEEETTTSCHHHHHHHHCT-TC
T ss_pred             cEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHH---HH-HHHHHHc---CCc---eEEecCchHHHHHHHHhcC-CC
Confidence            7999999999999999999999999 9999886422   11 22222 2   111   224555532   2233222 36


Q ss_pred             CCEEEEccc
Q 025786          146 FDAVMHFAA  154 (248)
Q Consensus       146 iD~li~~Ag  154 (248)
                      +|++|+|+|
T Consensus       231 ~d~vi~~~G  239 (357)
T 2zb4_A          231 VDVYFDNVG  239 (357)
T ss_dssp             EEEEEESCC
T ss_pred             CCEEEECCC
Confidence            999999998

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=98.01  E-value=1e-05  Score=68.65  Aligned_cols=75  Identities=19%  Similarity=0.176  Sum_probs=50.3

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCH---HHHHHHhhcCCCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDA---KAVNKFFSENAFD  147 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~---~~~~~~~~~~~iD  147 (248)
                      ++|+|+||+|+||..++..+...|++|++++++..+    .+..+++.   ... .  .|..+.   +.+.+.....++|
T Consensus       150 ~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~----~~~~~~~g---a~~-~--~~~~~~~~~~~~~~~~~~~g~D  219 (334)
T 3qwb_A          150 DYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEK----LKIAKEYG---AEY-L--INASKEDILRQVLKFTNGKGVD  219 (334)
T ss_dssp             CEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHH----HHHHHHTT---CSE-E--EETTTSCHHHHHHHHTTTSCEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHH----HHHHHHcC---CcE-E--EeCCCchHHHHHHHHhCCCCce
Confidence            899999999999999999999999999999864322    22333332   122 2  233332   3333333334799


Q ss_pred             EEEEcccc
Q 025786          148 AVMHFAAV  155 (248)
Q Consensus       148 ~li~~Ag~  155 (248)
                      ++|+|+|.
T Consensus       220 ~vid~~g~  227 (334)
T 3qwb_A          220 ASFDSVGK  227 (334)
T ss_dssp             EEEECCGG
T ss_pred             EEEECCCh
Confidence            99999983

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=98.01  E-value=1.5e-05  Score=67.70  Aligned_cols=75  Identities=19%  Similarity=0.091  Sum_probs=50.9

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCH---HHHHHHhhcCCCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDA---KAVNKFFSENAFD  147 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~---~~~~~~~~~~~iD  147 (248)
                      ++|+|+||+|+||..++..+...|++|++++++..+.+    ..+++.   ... .  .|..+.   +.+.+.....++|
T Consensus       146 ~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~----~~~~lg---a~~-~--~~~~~~~~~~~~~~~~~~~g~D  215 (340)
T 3gms_A          146 DVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTE----ELLRLG---AAY-V--IDTSTAPLYETVMELTNGIGAD  215 (340)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHH----HHHHHT---CSE-E--EETTTSCHHHHHHHHTTTSCEE
T ss_pred             CEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHH----HHHhCC---CcE-E--EeCCcccHHHHHHHHhCCCCCc
Confidence            89999999999999999999889999999987554332    223332   122 1  244332   2333333334799


Q ss_pred             EEEEcccc
Q 025786          148 AVMHFAAV  155 (248)
Q Consensus       148 ~li~~Ag~  155 (248)
                      ++|+|+|.
T Consensus       216 vvid~~g~  223 (340)
T 3gms_A          216 AAIDSIGG  223 (340)
T ss_dssp             EEEESSCH
T ss_pred             EEEECCCC
Confidence            99999984

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=98.01  E-value=7.1e-06  Score=69.86  Aligned_cols=73  Identities=14%  Similarity=0.118  Sum_probs=49.0

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhh-hhcCCCCceEEEEccCCCHH----HHHHHhhcCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQ-ELFPEPGRLQFIYADLGDAK----AVNKFFSENA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~~Dl~~~~----~~~~~~~~~~  145 (248)
                      ++|+|+||+|+||..+++.+...|++|++++++..+   . +..+ ++   +...   ..|.++.+    .+.+.. ..+
T Consensus       157 ~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~---~-~~~~~~~---g~~~---~~d~~~~~~~~~~~~~~~-~~~  225 (345)
T 2j3h_A          157 ETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEK---V-DLLKTKF---GFDD---AFNYKEESDLTAALKRCF-PNG  225 (345)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHH---H-HHHHHTS---CCSE---EEETTSCSCSHHHHHHHC-TTC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHH---H-HHHHHHc---CCce---EEecCCHHHHHHHHHHHh-CCC
Confidence            899999999999999999999999999998864322   1 2222 22   1121   23555432    233332 246


Q ss_pred             CCEEEEccc
Q 025786          146 FDAVMHFAA  154 (248)
Q Consensus       146 iD~li~~Ag  154 (248)
                      +|++|+|+|
T Consensus       226 ~d~vi~~~g  234 (345)
T 2j3h_A          226 IDIYFENVG  234 (345)
T ss_dssp             EEEEEESSC
T ss_pred             CcEEEECCC
Confidence            999999987

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=98.00  E-value=9.7e-06  Score=69.14  Aligned_cols=75  Identities=15%  Similarity=0.147  Sum_probs=50.4

Q ss_pred             eEEEEecCCchhHHHHHHHHHHC-CCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHH---HHHHhhcCCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKD-SYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKA---VNKFFSENAF  146 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~---~~~~~~~~~i  146 (248)
                      ++|+|||++|+||..+++.+... |++|++++++..+.    +..+++.   ...   ..|..+.+.   +.++...+++
T Consensus       172 ~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~----~~~~~~g---~~~---~~~~~~~~~~~~~~~~~~~~~~  241 (347)
T 1jvb_A          172 KTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAV----EAAKRAG---ADY---VINASMQDPLAEIRRITESKGV  241 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHH----HHHHHHT---CSE---EEETTTSCHHHHHHHHTTTSCE
T ss_pred             CEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHH----HHHHHhC---CCE---EecCCCccHHHHHHHHhcCCCc
Confidence            89999999999999999999999 99999988643221    2223332   122   234444332   4443321479


Q ss_pred             CEEEEcccc
Q 025786          147 DAVMHFAAV  155 (248)
Q Consensus       147 D~li~~Ag~  155 (248)
                      |++|+|+|.
T Consensus       242 d~vi~~~g~  250 (347)
T 1jvb_A          242 DAVIDLNNS  250 (347)
T ss_dssp             EEEEESCCC
T ss_pred             eEEEECCCC
Confidence            999999984

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=97.99  E-value=1.9e-05  Score=66.93  Aligned_cols=75  Identities=19%  Similarity=0.157  Sum_probs=49.6

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhh-hhhcCCCCceEEEEccCCCHHHHHHHhh--cCCCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVL-QELFPEPGRLQFIYADLGDAKAVNKFFS--ENAFD  147 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~~iD  147 (248)
                      ++|+||||+|+||..+++.+...|++|++++++..+.    +.. +++   +...   ..|..+.+..+.+.+  .+++|
T Consensus       151 ~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~----~~~~~~~---g~~~---~~~~~~~~~~~~~~~~~~~~~d  220 (336)
T 4b7c_A          151 ETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKC----RFLVEEL---GFDG---AIDYKNEDLAAGLKRECPKGID  220 (336)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHH----HHHHHTT---CCSE---EEETTTSCHHHHHHHHCTTCEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH----HHHHHHc---CCCE---EEECCCHHHHHHHHHhcCCCce
Confidence            8999999999999999999999999999998643221    222 333   1111   234444332222222  24699


Q ss_pred             EEEEcccc
Q 025786          148 AVMHFAAV  155 (248)
Q Consensus       148 ~li~~Ag~  155 (248)
                      ++|+|+|.
T Consensus       221 ~vi~~~g~  228 (336)
T 4b7c_A          221 VFFDNVGG  228 (336)
T ss_dssp             EEEESSCH
T ss_pred             EEEECCCc
Confidence            99999983

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=97.97  E-value=4.7e-05  Score=64.81  Aligned_cols=116  Identities=14%  Similarity=0.120  Sum_probs=69.7

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCC--CEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCC
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDS--YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFD  147 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD  147 (248)
                      +++|.|+|++|++|..++..++..|  .+|+++|....+.+.....+....-...++.+ .   +|   ..+.++  +.|
T Consensus         8 ~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~~~~~i~~-t---~d---~~~al~--dAD   78 (343)
T 3fi9_A            8 EEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGFEGLNLTF-T---SD---IKEALT--DAK   78 (343)
T ss_dssp             SSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCCTTCCCEE-E---SC---HHHHHT--TEE
T ss_pred             CCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcCCCCceEE-c---CC---HHHHhC--CCC
Confidence            4789999999999999999999998  48999985332212111112222111112221 1   22   333344  579


Q ss_pred             EEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCE--EEEecc
Q 025786          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDT--LIYSST  196 (248)
Q Consensus       148 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~--iV~~SS  196 (248)
                      +||.+||...  ....+..+.+..|......+.+.+.+..+..  ++.+|.
T Consensus        79 vVvitaG~p~--kpG~~R~dLl~~N~~I~~~i~~~i~~~~p~a~~vlvvsN  127 (343)
T 3fi9_A           79 YIVSSGGAPR--KEGMTREDLLKGNAEIAAQLGKDIKSYCPDCKHVIIIFN  127 (343)
T ss_dssp             EEEECCC---------CHHHHHHHHHHHHHHHHHHHHHHCTTCCEEEECSS
T ss_pred             EEEEccCCCC--CCCCCHHHHHHHHHHHHHHHHHHHHHhccCcEEEEEecC
Confidence            9999999642  2223445667788888888889888876443  455554

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=97.96  E-value=1.1e-05  Score=68.07  Aligned_cols=75  Identities=13%  Similarity=-0.005  Sum_probs=50.2

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHH---HHHHHhhcCCCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAK---AVNKFFSENAFD  147 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~---~~~~~~~~~~iD  147 (248)
                      ++|+|+||+|+||..+++.+...|++|++++++..+.    +..+++.   ... .  .|..+.+   .+.+.....++|
T Consensus       142 ~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~----~~~~~~G---a~~-~--~~~~~~~~~~~~~~~~~~~g~D  211 (325)
T 3jyn_A          142 EIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKA----AHAKALG---AWE-T--IDYSHEDVAKRVLELTDGKKCP  211 (325)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHH----HHHHHHT---CSE-E--EETTTSCHHHHHHHHTTTCCEE
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH----HHHHHcC---CCE-E--EeCCCccHHHHHHHHhCCCCce
Confidence            8999999999999999999999999999998643222    2233332   111 2  3443332   333333324799


Q ss_pred             EEEEcccc
Q 025786          148 AVMHFAAV  155 (248)
Q Consensus       148 ~li~~Ag~  155 (248)
                      ++|+|+|.
T Consensus       212 vvid~~g~  219 (325)
T 3jyn_A          212 VVYDGVGQ  219 (325)
T ss_dssp             EEEESSCG
T ss_pred             EEEECCCh
Confidence            99999983

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=97.96  E-value=1.5e-05  Score=68.23  Aligned_cols=74  Identities=14%  Similarity=0.105  Sum_probs=50.4

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCH---HHHHHHhhcCCCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDA---KAVNKFFSENAFD  147 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~---~~~~~~~~~~~iD  147 (248)
                      ++|+|+||+|+||..+++.+...|++|++++++..+.    +..+++.   ... .  .|..+.   +.+.+.. ..++|
T Consensus       169 ~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~----~~~~~lG---a~~-~--~~~~~~~~~~~~~~~~-~~g~D  237 (353)
T 4dup_A          169 ESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKC----EACERLG---AKR-G--INYRSEDFAAVIKAET-GQGVD  237 (353)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHH----HHHHHHT---CSE-E--EETTTSCHHHHHHHHH-SSCEE
T ss_pred             CEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHH----HHHHhcC---CCE-E--EeCCchHHHHHHHHHh-CCCce
Confidence            8999999999999999999999999999998643322    2233332   121 2  233332   2333333 35799


Q ss_pred             EEEEcccc
Q 025786          148 AVMHFAAV  155 (248)
Q Consensus       148 ~li~~Ag~  155 (248)
                      ++|+|+|.
T Consensus       238 vvid~~g~  245 (353)
T 4dup_A          238 IILDMIGA  245 (353)
T ss_dssp             EEEESCCG
T ss_pred             EEEECCCH
Confidence            99999983

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=97.91  E-value=5.5e-06  Score=68.96  Aligned_cols=77  Identities=12%  Similarity=0.192  Sum_probs=47.7

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li  150 (248)
                      ++++|||++ ++|++++..|++.| +|++++|+..+.+++.+.+.....  ... .+.+|+.+.   .+.+  +++|+||
T Consensus       129 k~vlV~GaG-giG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~--~~~-~~~~d~~~~---~~~~--~~~DilV  198 (287)
T 1nvt_A          129 KNIVIYGAG-GAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLN--KKF-GEEVKFSGL---DVDL--DGVDIII  198 (287)
T ss_dssp             CEEEEECCS-HHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHT--CCH-HHHEEEECT---TCCC--TTCCEEE
T ss_pred             CEEEEECch-HHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhcc--ccc-ceeEEEeeH---HHhh--CCCCEEE
Confidence            899999986 99999999999999 999988654332222222211100  000 112344331   1112  4789999


Q ss_pred             Ecccccc
Q 025786          151 HFAAVAY  157 (248)
Q Consensus       151 ~~Ag~~~  157 (248)
                      ||++...
T Consensus       199 n~ag~~~  205 (287)
T 1nvt_A          199 NATPIGM  205 (287)
T ss_dssp             ECSCTTC
T ss_pred             ECCCCCC
Confidence            9999754

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=97.91  E-value=1.6e-05  Score=67.62  Aligned_cols=74  Identities=14%  Similarity=0.047  Sum_probs=50.2

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHH---HHHHHhhcCCCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAK---AVNKFFSENAFD  147 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~---~~~~~~~~~~iD  147 (248)
                      ++|+|+|++|+||..+++.+...|++|++++++..+.    +..+++.   ...   .+|.++.+   .+.+.....++|
T Consensus       168 ~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~----~~~~~~g---a~~---~~d~~~~~~~~~~~~~~~~~~~d  237 (343)
T 2eih_A          168 DDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKL----RRAKALG---ADE---TVNYTHPDWPKEVRRLTGGKGAD  237 (343)
T ss_dssp             CEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHH----HHHHHHT---CSE---EEETTSTTHHHHHHHHTTTTCEE
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHH----HHHHhcC---CCE---EEcCCcccHHHHHHHHhCCCCce
Confidence            8999999999999999999999999999988643222    2223332   111   24655533   233333223799


Q ss_pred             EEEEccc
Q 025786          148 AVMHFAA  154 (248)
Q Consensus       148 ~li~~Ag  154 (248)
                      ++|+++|
T Consensus       238 ~vi~~~g  244 (343)
T 2eih_A          238 KVVDHTG  244 (343)
T ss_dssp             EEEESSC
T ss_pred             EEEECCC
Confidence            9999998

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=97.91  E-value=3.5e-05  Score=65.57  Aligned_cols=76  Identities=22%  Similarity=0.152  Sum_probs=50.0

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCH-HHHHHHhhcCCCCEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDA-KAVNKFFSENAFDAV  149 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~iD~l  149 (248)
                      ++|+|+||+|+||..++..+...|++|++++++..+.    +..+++.   .. .++..+ .+. +.+.+.....++|++
T Consensus       161 ~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~----~~~~~~g---a~-~v~~~~-~~~~~~v~~~~~~~g~Dvv  231 (342)
T 4eye_A          161 ETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAAT----EFVKSVG---AD-IVLPLE-EGWAKAVREATGGAGVDMV  231 (342)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGH----HHHHHHT---CS-EEEESS-TTHHHHHHHHTTTSCEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHH----HHHHhcC---Cc-EEecCc-hhHHHHHHHHhCCCCceEE
Confidence            8999999999999999999999999999998644332    2333332   11 223333 222 223333322369999


Q ss_pred             EEcccc
Q 025786          150 MHFAAV  155 (248)
Q Consensus       150 i~~Ag~  155 (248)
                      |+|+|.
T Consensus       232 id~~g~  237 (342)
T 4eye_A          232 VDPIGG  237 (342)
T ss_dssp             EESCC-
T ss_pred             EECCch
Confidence            999983

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.86  E-value=1.9e-05  Score=60.90  Aligned_cols=72  Identities=18%  Similarity=0.126  Sum_probs=52.9

Q ss_pred             eEEEEecCCchhHHHHHHHHHHC-CCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHH--hhcCCCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKD-SYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKF--FSENAFD  147 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~--~~~~~iD  147 (248)
                      ++|+|.| .|.+|..+++.|.+. |++|++++++...   . +.+.+.     .+..+.+|.++.+.+.++  ++  +.|
T Consensus        40 ~~v~IiG-~G~~G~~~a~~L~~~~g~~V~vid~~~~~---~-~~~~~~-----g~~~~~gd~~~~~~l~~~~~~~--~ad  107 (183)
T 3c85_A           40 AQVLILG-MGRIGTGAYDELRARYGKISLGIEIREEA---A-QQHRSE-----GRNVISGDATDPDFWERILDTG--HVK  107 (183)
T ss_dssp             CSEEEEC-CSHHHHHHHHHHHHHHCSCEEEEESCHHH---H-HHHHHT-----TCCEEECCTTCHHHHHTBCSCC--CCC
T ss_pred             CcEEEEC-CCHHHHHHHHHHHhccCCeEEEEECCHHH---H-HHHHHC-----CCCEEEcCCCCHHHHHhccCCC--CCC
Confidence            6788998 599999999999999 9999999864322   1 112221     355678899998877765  33  689


Q ss_pred             EEEEccc
Q 025786          148 AVMHFAA  154 (248)
Q Consensus       148 ~li~~Ag  154 (248)
                      +||.+.+
T Consensus       108 ~vi~~~~  114 (183)
T 3c85_A          108 LVLLAMP  114 (183)
T ss_dssp             EEEECCS
T ss_pred             EEEEeCC
Confidence            9997654

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=97.85  E-value=5.3e-05  Score=60.15  Aligned_cols=73  Identities=16%  Similarity=0.160  Sum_probs=53.5

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li  150 (248)
                      |+|+|.|+ |.+|+++++.|.++|++|+++++++..   .. .+.+.    ....++.+|.++.+.+.++-- .+.|++|
T Consensus         1 M~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~---~~-~l~~~----~~~~~i~gd~~~~~~l~~a~i-~~ad~vi   70 (218)
T 3l4b_C            1 MKVIIIGG-ETTAYYLARSMLSRKYGVVIINKDREL---CE-EFAKK----LKATIIHGDGSHKEILRDAEV-SKNDVVV   70 (218)
T ss_dssp             CCEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHH---HH-HHHHH----SSSEEEESCTTSHHHHHHHTC-CTTCEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHH---HH-HHHHH----cCCeEEEcCCCCHHHHHhcCc-ccCCEEE
Confidence            46899996 999999999999999999999854322   11 11111    146789999999988877622 2679998


Q ss_pred             Ecc
Q 025786          151 HFA  153 (248)
Q Consensus       151 ~~A  153 (248)
                      -+.
T Consensus        71 ~~~   73 (218)
T 3l4b_C           71 ILT   73 (218)
T ss_dssp             ECC
T ss_pred             Eec
Confidence            654

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=97.84  E-value=3.4e-05  Score=65.80  Aligned_cols=75  Identities=7%  Similarity=0.061  Sum_probs=50.1

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCH---HHHHHHhhcCCCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDA---KAVNKFFSENAFD  147 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~---~~~~~~~~~~~iD  147 (248)
                      ++++|+||+|+||...++.+...|++|++++++..+.    +..+++.   .. ..  .|..+.   +.+.+.....++|
T Consensus       166 ~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~----~~~~~~G---a~-~~--~~~~~~~~~~~v~~~~~~~g~D  235 (349)
T 3pi7_A          166 KAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQI----ALLKDIG---AA-HV--LNEKAPDFEATLREVMKAEQPR  235 (349)
T ss_dssp             SEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGH----HHHHHHT---CS-EE--EETTSTTHHHHHHHHHHHHCCC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH----HHHHHcC---CC-EE--EECCcHHHHHHHHHHhcCCCCc
Confidence            7999999999999999999999999999998644332    2233332   11 12  233332   2333333324799


Q ss_pred             EEEEcccc
Q 025786          148 AVMHFAAV  155 (248)
Q Consensus       148 ~li~~Ag~  155 (248)
                      ++|+++|.
T Consensus       236 ~vid~~g~  243 (349)
T 3pi7_A          236 IFLDAVTG  243 (349)
T ss_dssp             EEEESSCH
T ss_pred             EEEECCCC
Confidence            99999983

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.81  E-value=6.2e-05  Score=55.49  Aligned_cols=72  Identities=15%  Similarity=0.245  Sum_probs=53.3

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li  150 (248)
                      ++|+|.|+ |.+|..+++.|.+.|++|+++++++..    .+.+.+     ..+.++.+|.++++.++++-- .+.|++|
T Consensus         8 ~~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~----~~~~~~-----~g~~~i~gd~~~~~~l~~a~i-~~ad~vi   76 (140)
T 3fwz_A            8 NHALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTR----VDELRE-----RGVRAVLGNAANEEIMQLAHL-ECAKWLI   76 (140)
T ss_dssp             SCEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHH----HHHHHH-----TTCEEEESCTTSHHHHHHTTG-GGCSEEE
T ss_pred             CCEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHH----HHHHHH-----cCCCEEECCCCCHHHHHhcCc-ccCCEEE
Confidence            67999985 999999999999999999999864322    122222     246778999999988776421 2578888


Q ss_pred             Ecc
Q 025786          151 HFA  153 (248)
Q Consensus       151 ~~A  153 (248)
                      -+.
T Consensus        77 ~~~   79 (140)
T 3fwz_A           77 LTI   79 (140)
T ss_dssp             ECC
T ss_pred             EEC
Confidence            654

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=97.80  E-value=6.7e-05  Score=63.02  Aligned_cols=82  Identities=12%  Similarity=0.124  Sum_probs=52.7

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC-EEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~l  149 (248)
                      ++++|+|+ ||+|++++..|++.|+ +|+++.|+..+.+++.+..+++... ....+...+..+.+.+.+.+.  ..|+|
T Consensus       149 k~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~-~~~~v~~~~~~~l~~~~~~l~--~~DiI  224 (312)
T 3t4e_A          149 KTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNEN-TDCVVTVTDLADQHAFTEALA--SADIL  224 (312)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHH-SSCEEEEEETTCHHHHHHHHH--HCSEE
T ss_pred             CEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhc-cCcceEEechHhhhhhHhhcc--CceEE
Confidence            89999996 9999999999999998 8999987632233333333322111 112233445556444444444  47999


Q ss_pred             EEccccc
Q 025786          150 MHFAAVA  156 (248)
Q Consensus       150 i~~Ag~~  156 (248)
                      ||+-...
T Consensus       225 INaTp~G  231 (312)
T 3t4e_A          225 TNGTKVG  231 (312)
T ss_dssp             EECSSTT
T ss_pred             EECCcCC
Confidence            9987654

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=97.77  E-value=4.5e-05  Score=63.27  Aligned_cols=77  Identities=17%  Similarity=0.268  Sum_probs=50.9

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC-EEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~l  149 (248)
                      ++++|+|+ ||+|++++..|++.|+ +|++++|+..+.+++.+.+.....   .+.+...+..+   +.+.+.  ..|+|
T Consensus       128 k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~---~~~i~~~~~~~---l~~~l~--~~DiV  198 (283)
T 3jyo_A          128 DSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVG---REAVVGVDARG---IEDVIA--AADGV  198 (283)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHT---SCCEEEECSTT---HHHHHH--HSSEE
T ss_pred             CEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcC---CceEEEcCHHH---HHHHHh--cCCEE
Confidence            89999997 8999999999999998 799998765444433333332211   12233334333   444444  47999


Q ss_pred             EEccccc
Q 025786          150 MHFAAVA  156 (248)
Q Consensus       150 i~~Ag~~  156 (248)
                      ||+....
T Consensus       199 InaTp~G  205 (283)
T 3jyo_A          199 VNATPMG  205 (283)
T ss_dssp             EECSSTT
T ss_pred             EECCCCC
Confidence            9987643

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=97.74  E-value=0.00026  Score=59.85  Aligned_cols=114  Identities=17%  Similarity=0.216  Sum_probs=69.4

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC--EEEEEecCCCCcchhhhhhhhhcCC-CCceEEEEccCCCHHHHHHHhhcCCCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELFPE-PGRLQFIYADLGDAKAVNKFFSENAFD  147 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~iD  147 (248)
                      ++|.|+|+ |.+|..++..|+..|.  +|+++|+...+.+.....+.+..+. +..+.....|   ++    .++  +.|
T Consensus         6 ~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~---~~----a~~--~aD   75 (326)
T 3pqe_A            6 NKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGT---YE----DCK--DAD   75 (326)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEEC---GG----GGT--TCS
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCc---HH----HhC--CCC
Confidence            78999995 9999999999999987  8999986432222111112222111 1233333222   22    233  679


Q ss_pred             EEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCC-EEEEecc
Q 025786          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD-TLIYSST  196 (248)
Q Consensus       148 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~-~iV~~SS  196 (248)
                      +||..||...  ....+..+.+..|......+.+.+.+..+. .++.+|.
T Consensus        76 vVvi~ag~p~--kpG~~R~dL~~~N~~Iv~~i~~~I~~~~p~a~vlvvtN  123 (326)
T 3pqe_A           76 IVCICAGANQ--KPGETRLELVEKNLKIFKGIVSEVMASGFDGIFLVATN  123 (326)
T ss_dssp             EEEECCSCCC--CTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECSS
T ss_pred             EEEEecccCC--CCCccHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcCC
Confidence            9999999642  222344556677777777788888776543 4555553

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=97.72  E-value=2.1e-05  Score=70.88  Aligned_cols=71  Identities=17%  Similarity=0.275  Sum_probs=44.4

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li  150 (248)
                      ++++|||| ||+|++++..|++.|++|++++|+..   .+.+..+++.   .++  +  ++.|   +.++ ....+|+||
T Consensus       365 k~vlV~Ga-GGig~aia~~L~~~G~~V~i~~R~~~---~a~~la~~~~---~~~--~--~~~d---l~~~-~~~~~DilV  429 (523)
T 2o7s_A          365 KTVVVIGA-GGAGKALAYGAKEKGAKVVIANRTYE---RALELAEAIG---GKA--L--SLTD---LDNY-HPEDGMVLA  429 (523)
T ss_dssp             -CEEEECC-SHHHHHHHHHHHHHCC-CEEEESSHH---HHHHHHHHTT---C-C--E--ETTT---TTTC---CCSEEEE
T ss_pred             CEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHH---HHHHHHHHcC---Cce--e--eHHH---hhhc-cccCceEEE
Confidence            88999999 69999999999999999999886432   2333333331   122  1  1212   1111 112589999


Q ss_pred             Eccccc
Q 025786          151 HFAAVA  156 (248)
Q Consensus       151 ~~Ag~~  156 (248)
                      ||+|+.
T Consensus       430 N~agvg  435 (523)
T 2o7s_A          430 NTTSMG  435 (523)
T ss_dssp             ECSSTT
T ss_pred             ECCCCC
Confidence            999974

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=97.71  E-value=1.8e-05  Score=62.44  Aligned_cols=34  Identities=26%  Similarity=0.383  Sum_probs=30.7

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~  104 (248)
                      |+|+|+||+|.+|.++++.|++.|++|++++|+.
T Consensus         1 m~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~   34 (212)
T 1jay_A            1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRRE   34 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSH
T ss_pred             CeEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence            3689999999999999999999999999998753

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=97.70  E-value=9.1e-05  Score=62.60  Aligned_cols=114  Identities=16%  Similarity=0.196  Sum_probs=59.8

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCC--EEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCC
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFD  147 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD  147 (248)
                      +++|.|+|+ |.+|..++..|+..|.  +|+++|+.....+.....+....+....+.+...   +++    .++  +.|
T Consensus         9 ~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~---~~~----a~~--~aD   78 (326)
T 3vku_A            9 HQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSA---EYS----DAK--DAD   78 (326)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEEC---CGG----GGT--TCS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEEC---cHH----Hhc--CCC
Confidence            378999996 9999999999999987  8999986332222111122221111112333322   232    233  679


Q ss_pred             EEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCC-EEEEec
Q 025786          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD-TLIYSS  195 (248)
Q Consensus       148 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~-~iV~~S  195 (248)
                      +||..||....  ...+..+.+..|......+.+.+.+..+. .++.+|
T Consensus        79 iVvi~ag~~~k--pG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~ilvvt  125 (326)
T 3vku_A           79 LVVITAGAPQK--PGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAA  125 (326)
T ss_dssp             EEEECCCCC------------------CHHHHHHHHHTTTCCSEEEECS
T ss_pred             EEEECCCCCCC--CCchHHHHHHHHHHHHHHHHHHHHhcCCceEEEEcc
Confidence            99999996422  12233455666666677777777765533 444444

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=97.70  E-value=0.00027  Score=59.85  Aligned_cols=115  Identities=15%  Similarity=0.116  Sum_probs=69.9

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC--EEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~  148 (248)
                      ++|.|+|+ |.+|..++..|+.+|.  +|+++|+.....+.....+............+..  .|+++    ++  +.|+
T Consensus        20 ~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~--~d~~~----~~--~aDi   90 (331)
T 4aj2_A           20 NKITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSS--KDYSV----TA--NSKL   90 (331)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEEC--SSGGG----GT--TEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEc--CCHHH----hC--CCCE
Confidence            78999997 9999999999999997  8999986432222211122222111111122222  23332    33  6799


Q ss_pred             EEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCC-CEEEEecc
Q 025786          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV-DTLIYSST  196 (248)
Q Consensus       149 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~-~~iV~~SS  196 (248)
                      +|..||....  ...+..+.+..|......+.+.+.+..+ ..++.+|.
T Consensus        91 Vvi~aG~~~k--pG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~vlvvtN  137 (331)
T 4aj2_A           91 VIITAGARQQ--EGESRLNLVQRNVNIFKFIIPNVVKYSPQCKLLIVSN  137 (331)
T ss_dssp             EEECCSCCCC--TTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred             EEEccCCCCC--CCccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence            9999997432  2344566777887777777777776643 34555553

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=97.68  E-value=7.1e-05  Score=64.25  Aligned_cols=74  Identities=20%  Similarity=0.254  Sum_probs=51.0

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li  150 (248)
                      ++|+|+|+ |++|+.+++.+...|++|++++|+..+.+.+    .+...  ..+..   +..+.+++.+.+.  +.|+||
T Consensus       168 ~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~----~~~~~--~~~~~---~~~~~~~~~~~~~--~~DvVI  235 (361)
T 1pjc_A          168 GKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYL----ETLFG--SRVEL---LYSNSAEIETAVA--EADLLI  235 (361)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHH----HHHHG--GGSEE---EECCHHHHHHHHH--TCSEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHH----HHhhC--ceeEe---eeCCHHHHHHHHc--CCCEEE
Confidence            89999998 9999999999999999999998754332222    22111  11212   2234556666665  689999


Q ss_pred             Eccccc
Q 025786          151 HFAAVA  156 (248)
Q Consensus       151 ~~Ag~~  156 (248)
                      |+++..
T Consensus       236 ~~~~~~  241 (361)
T 1pjc_A          236 GAVLVP  241 (361)
T ss_dssp             ECCCCT
T ss_pred             ECCCcC
Confidence            999863

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=97.68  E-value=7.8e-05  Score=63.93  Aligned_cols=73  Identities=21%  Similarity=0.153  Sum_probs=47.8

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCH---HHHHHHhhcCCCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDA---KAVNKFFSENAFD  147 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~---~~~~~~~~~~~iD  147 (248)
                      ++|+|+||+|+||..+++.+...|++|++++++..+    .+..+++.   .. ..+  |..+.   +.+.+.. ..++|
T Consensus       165 ~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~----~~~~~~~G---a~-~~~--~~~~~~~~~~~~~~~-~~g~D  233 (362)
T 2c0c_A          165 KKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEK----SAFLKSLG---CD-RPI--NYKTEPVGTVLKQEY-PEGVD  233 (362)
T ss_dssp             CEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHH----HHHHHHTT---CS-EEE--ETTTSCHHHHHHHHC-TTCEE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHH----HHHHHHcC---Cc-EEE--ecCChhHHHHHHHhc-CCCCC
Confidence            899999999999999999999999999998864222    22233331   12 122  33332   1222222 24699


Q ss_pred             EEEEccc
Q 025786          148 AVMHFAA  154 (248)
Q Consensus       148 ~li~~Ag  154 (248)
                      ++|+++|
T Consensus       234 ~vid~~g  240 (362)
T 2c0c_A          234 VVYESVG  240 (362)
T ss_dssp             EEEECSC
T ss_pred             EEEECCC
Confidence            9999987

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=97.65  E-value=0.0012  Score=55.97  Aligned_cols=112  Identities=13%  Similarity=0.054  Sum_probs=65.1

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC-EEEEEecCCCCcchhhhhhhhh---cCCCCceEEEEccCCCHHHHHHHhhcCCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQEL---FPEPGRLQFIYADLGDAKAVNKFFSENAF  146 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~~~~Dl~~~~~~~~~~~~~~i  146 (248)
                      ++|.|.|| |.+|..++..|+..|+ +|+++|+.....+.....+...   .....++.+.    +|.   ++.++  +.
T Consensus        10 ~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t----~d~---~ea~~--~a   79 (331)
T 1pzg_A           10 KKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAE----YSY---EAALT--GA   79 (331)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEE----CSH---HHHHT--TC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEEe----CCH---HHHhC--CC
Confidence            68999998 9999999999999998 9999987543322211111111   1112223221    233   33344  67


Q ss_pred             CEEEEcccccccCCCCC---CchhhHhhhHHHHHHHHHHHHHcCCCEEE
Q 025786          147 DAVMHFAAVAYVGESTL---DPLKYYHNITSNTLVVLESMARHGVDTLI  192 (248)
Q Consensus       147 D~li~~Ag~~~~~~~~~---~~~~~~~~~~~~~~~ll~~~~~~~~~~iV  192 (248)
                      |+||..+|.........   ...+....|......+.+.+.+..+..++
T Consensus        80 DiVi~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~p~a~v  128 (331)
T 1pzg_A           80 DCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFI  128 (331)
T ss_dssp             SEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEE
T ss_pred             CEEEEccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEE
Confidence            99999998643211100   23344555666666677777665444333

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=97.63  E-value=8.9e-05  Score=65.38  Aligned_cols=33  Identities=24%  Similarity=0.134  Sum_probs=30.4

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNL  103 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~  103 (248)
                      ++|+|+||+|+||..++..+...|++|++++++
T Consensus       222 ~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~  254 (447)
T 4a0s_A          222 DIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSS  254 (447)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCC
Confidence            899999999999999999999999999988753

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*

Probab=97.58  E-value=0.0006  Score=57.16  Aligned_cols=110  Identities=12%  Similarity=0.101  Sum_probs=63.9

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC-EEEEEecCCCCcchhhhhhhhhcC------CCCceEEEEccCCCHHHHHHHhhc
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFP------EPGRLQFIYADLGDAKAVNKFFSE  143 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~------~~~~~~~~~~Dl~~~~~~~~~~~~  143 (248)
                      ++|.|+|+ |.+|..++..|+..|+ +|+++|++..+.+   ....++..      ...++...    +|.+    .++ 
T Consensus         3 ~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~~~~~---g~~~dl~~~~~~~~~~~~i~~t----~d~~----a~~-   69 (309)
T 1ur5_A            3 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQ---GKALDLYEASPIEGFDVRVTGT----NNYA----DTA-   69 (309)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSSSHHH---HHHHHHHTTHHHHTCCCCEEEE----SCGG----GGT-
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCccHHH---HHHHhHHHhHhhcCCCeEEEEC----CCHH----HHC-
Confidence            68999998 9999999999999997 9888886533222   21122211      11222221    2222    233 


Q ss_pred             CCCCEEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEecc
Q 025786          144 NAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSST  196 (248)
Q Consensus       144 ~~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS  196 (248)
                       +.|+||..+|.....  .....+....|......+.+.+.+..+..+|.+.|
T Consensus        70 -~aD~Vi~a~g~p~~~--g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~t  119 (309)
T 1ur5_A           70 -NSDVIVVTSGAPRKP--GMSREDLIKVNADITRACISQAAPLSPNAVIIMVN  119 (309)
T ss_dssp             -TCSEEEECCCC----------CHHHHHHHHHHHHHHHHHGGGCTTCEEEECC
T ss_pred             -CCCEEEEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEcC
Confidence             679999999864321  11223345566666677777777765554544444

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=97.57  E-value=0.00019  Score=59.88  Aligned_cols=74  Identities=15%  Similarity=0.210  Sum_probs=49.7

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC-EEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~l  149 (248)
                      ++++|+|+ |++|++++..|++.|+ +|++++|+..+   +.+..+++.....       ++.+.+++.+.+.  +.|+|
T Consensus       142 ~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~k---a~~la~~~~~~~~-------~~~~~~~~~~~~~--~aDiv  208 (297)
T 2egg_A          142 KRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEK---AERLVREGDERRS-------AYFSLAEAETRLA--EYDII  208 (297)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHH---HHHHHHHSCSSSC-------CEECHHHHHHTGG--GCSEE
T ss_pred             CEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHH---HHHHHHHhhhccC-------ceeeHHHHHhhhc--cCCEE
Confidence            89999997 8999999999999998 99998864332   2233233211100       1223345555554  58999


Q ss_pred             EEcccccc
Q 025786          150 MHFAAVAY  157 (248)
Q Consensus       150 i~~Ag~~~  157 (248)
                      ||+.+...
T Consensus       209 In~t~~~~  216 (297)
T 2egg_A          209 INTTSVGM  216 (297)
T ss_dssp             EECSCTTC
T ss_pred             EECCCCCC
Confidence            99998643

>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1

Probab=97.57  E-value=0.00069  Score=57.04  Aligned_cols=112  Identities=16%  Similarity=0.234  Sum_probs=63.2

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC--EEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~  148 (248)
                      ++|.|+|+ |.+|..++..|+..|.  +|+++|....+.+.....+.+..+....+.+. .  .+.+    .++  +.|+
T Consensus         8 ~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~-~--~~~~----a~~--~aDv   77 (318)
T 1y6j_A            8 SKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLY-A--GDYS----DVK--DCDV   77 (318)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----CGG----GGT--TCSE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEE-E--CCHH----HhC--CCCE
Confidence            67999998 9999999999999987  89999975443332222222211111122222 1  2322    233  6899


Q ss_pred             EEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCC-EEEEe
Q 025786          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD-TLIYS  194 (248)
Q Consensus       149 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~-~iV~~  194 (248)
                      ||..+|....  ....-.+....|......+.+.+.+..+. .||++
T Consensus        78 Vii~~g~p~k--~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~  122 (318)
T 1y6j_A           78 IVVTAGANRK--PGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVV  122 (318)
T ss_dssp             EEECCCC--------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEEC
T ss_pred             EEEcCCCCCC--CCcCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEEe
Confidence            9999986432  12233445566666666777777665433 44443

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=97.56  E-value=2e-05  Score=65.01  Aligned_cols=73  Identities=18%  Similarity=0.321  Sum_probs=47.0

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li  150 (248)
                      ++++|+|+ |++|++++..|++.|++|++++|+..+.+++.   +++... ..+..  .|+   +++.   + ++.|+||
T Consensus       120 ~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~---~~~~~~-~~~~~--~~~---~~~~---~-~~~DivI  185 (272)
T 1p77_A          120 QHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELA---ERFQPY-GNIQA--VSM---DSIP---L-QTYDLVI  185 (272)
T ss_dssp             CEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHH---HHHGGG-SCEEE--EEG---GGCC---C-SCCSEEE
T ss_pred             CEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH---HHcccc-CCeEE--eeH---HHhc---c-CCCCEEE
Confidence            89999997 89999999999999999999987543333322   222111 12222  232   1111   1 3689999


Q ss_pred             Ecccccc
Q 025786          151 HFAAVAY  157 (248)
Q Consensus       151 ~~Ag~~~  157 (248)
                      |+++...
T Consensus       186 n~t~~~~  192 (272)
T 1p77_A          186 NATSAGL  192 (272)
T ss_dssp             ECCCC--
T ss_pred             ECCCCCC
Confidence            9998653

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=97.55  E-value=0.00032  Score=56.96  Aligned_cols=78  Identities=21%  Similarity=0.246  Sum_probs=52.7

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC-EEEEEecCC-------------------CCcchhhhhhhhhcCCCCceEEEEcc
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLS-------------------RGNIGAVKVLQELFPEPGRLQFIYAD  130 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~-~V~~~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~D  130 (248)
                      ++|+|.| .|++|.++++.|+..|. +|+++|+..                   .+.+.+.+.+.++.+ ..++..+..+
T Consensus        32 ~~VlVvG-~Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np-~~~v~~~~~~  109 (249)
T 1jw9_B           32 SRVLIVG-LGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINP-HIAITPVNAL  109 (249)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCT-TSEEEEECSC
T ss_pred             CeEEEEe-eCHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCC-CcEEEEEecc
Confidence            7899998 58999999999999997 899998654                   122222233333321 2245566666


Q ss_pred             CCCHHHHHHHhhcCCCCEEEEcc
Q 025786          131 LGDAKAVNKFFSENAFDAVMHFA  153 (248)
Q Consensus       131 l~~~~~~~~~~~~~~iD~li~~A  153 (248)
                      ++ .+.+.++++  +.|+||.+.
T Consensus       110 ~~-~~~~~~~~~--~~DvVi~~~  129 (249)
T 1jw9_B          110 LD-DAELAALIA--EHDLVLDCT  129 (249)
T ss_dssp             CC-HHHHHHHHH--TSSEEEECC
T ss_pred             CC-HhHHHHHHh--CCCEEEEeC
Confidence            65 355666666  689999874

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=97.55  E-value=0.00013  Score=60.81  Aligned_cols=71  Identities=20%  Similarity=0.185  Sum_probs=48.3

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li  150 (248)
                      ++|+|+|++|++|..+++.+...|++|++++++..+.+    ..+++.   .. .  ..|..+.+++.+.+  .++|++|
T Consensus       127 ~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~----~~~~~g---a~-~--~~~~~~~~~~~~~~--~~~d~vi  194 (302)
T 1iz0_A          127 EKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLA----LPLALG---AE-E--AATYAEVPERAKAW--GGLDLVL  194 (302)
T ss_dssp             CEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSH----HHHHTT---CS-E--EEEGGGHHHHHHHT--TSEEEEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH----HHHhcC---CC-E--EEECCcchhHHHHh--cCceEEE
Confidence            89999999999999999999999999999986543332    222331   11 1  23554412333333  3799999


Q ss_pred             Eccc
Q 025786          151 HFAA  154 (248)
Q Consensus       151 ~~Ag  154 (248)
                      + +|
T Consensus       195 d-~g  197 (302)
T 1iz0_A          195 E-VR  197 (302)
T ss_dssp             E-CS
T ss_pred             E-CC
Confidence            9 87

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=97.52  E-value=0.00025  Score=59.40  Aligned_cols=24  Identities=25%  Similarity=0.329  Sum_probs=21.8

Q ss_pred             chhHHHHHHHHHHCCCEEEEEecC
Q 025786           80 GYIGSHAALRLLKDSYRVTIVDNL  103 (248)
Q Consensus        80 g~IG~~la~~L~~~G~~V~~~~r~  103 (248)
                      |-.|.++|+.++++|++|+++.+.
T Consensus        65 GkmG~aiAe~~~~~Ga~V~lv~g~   88 (313)
T 1p9o_A           65 GRRGATSAEAFLAAGYGVLFLYRA   88 (313)
T ss_dssp             CHHHHHHHHHHHHTTCEEEEEEET
T ss_pred             cHHHHHHHHHHHHCCCEEEEEecC
Confidence            669999999999999999998763

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=97.51  E-value=0.00084  Score=56.66  Aligned_cols=113  Identities=14%  Similarity=0.025  Sum_probs=67.5

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC-EEEEEecCCCCcchhhhhhhhh---cCCCCceEEEEccCCCHHHHHHHhhcCCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQEL---FPEPGRLQFIYADLGDAKAVNKFFSENAF  146 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~~~~Dl~~~~~~~~~~~~~~i  146 (248)
                      ++|.|+|+ |.+|..++..|+..|. +|+++|+.....+.....+...   ...+.++.. ..   |+    +.++  +.
T Consensus         8 ~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~-t~---d~----~a~~--~a   76 (324)
T 3gvi_A            8 NKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTG-AN---DY----AAIE--GA   76 (324)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEE-ES---SG----GGGT--TC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEE-eC---CH----HHHC--CC
Confidence            68999998 9999999999999998 9999997543322111122221   111222222 12   22    2333  67


Q ss_pred             CEEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCC-EEEEecc
Q 025786          147 DAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD-TLIYSST  196 (248)
Q Consensus       147 D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~-~iV~~SS  196 (248)
                      |+||..||....  ...+..+.+..|......+.+.+.+..+. .++.+|.
T Consensus        77 DiVIiaag~p~k--~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvtN  125 (324)
T 3gvi_A           77 DVVIVTAGVPRK--PGMSRDDLLGINLKVMEQVGAGIKKYAPEAFVICITN  125 (324)
T ss_dssp             SEEEECCSCCCC-------CHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred             CEEEEccCcCCC--CCCCHHHHHHhhHHHHHHHHHHHHHHCCCeEEEecCC
Confidence            999999986432  12234456667777777777777776543 5555553

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=97.51  E-value=0.0002  Score=60.92  Aligned_cols=73  Identities=21%  Similarity=0.216  Sum_probs=47.7

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCH-HHHHHHhhcCCCCEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDA-KAVNKFFSENAFDAV  149 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~iD~l  149 (248)
                      ++|||+||+|+||..+++.+...|++|+++ ++..+    .+..+++.     +..+. +-.+. +.+.+.....++|++
T Consensus       152 ~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~----~~~~~~lG-----a~~i~-~~~~~~~~~~~~~~~~g~D~v  220 (343)
T 3gaz_A          152 QTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSD----LEYVRDLG-----ATPID-ASREPEDYAAEHTAGQGFDLV  220 (343)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHH----HHHHHHHT-----SEEEE-TTSCHHHHHHHHHTTSCEEEE
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHH----HHHHHHcC-----CCEec-cCCCHHHHHHHHhcCCCceEE
Confidence            899999999999999999999999999987 43222    22334442     12222 22222 233333333479999


Q ss_pred             EEccc
Q 025786          150 MHFAA  154 (248)
Q Consensus       150 i~~Ag  154 (248)
                      |+++|
T Consensus       221 id~~g  225 (343)
T 3gaz_A          221 YDTLG  225 (343)
T ss_dssp             EESSC
T ss_pred             EECCC
Confidence            99987

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=97.50  E-value=0.00017  Score=61.42  Aligned_cols=74  Identities=15%  Similarity=0.113  Sum_probs=48.8

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCC--HHHHHHHhhcCCCCE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD--AKAVNKFFSENAFDA  148 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~iD~  148 (248)
                      ++|+|+||+|+||...++.+...|++|++++++..+    .+..+++.   .. .+  .|..+  .+.+.+. ...++|+
T Consensus       152 ~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~----~~~~~~lG---a~-~v--i~~~~~~~~~~~~~-~~~g~Dv  220 (346)
T 3fbg_A          152 KTLLIINGAGGVGSIATQIAKAYGLRVITTASRNET----IEWTKKMG---AD-IV--LNHKESLLNQFKTQ-GIELVDY  220 (346)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHH----HHHHHHHT---CS-EE--ECTTSCHHHHHHHH-TCCCEEE
T ss_pred             CEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHH----HHHHHhcC---Cc-EE--EECCccHHHHHHHh-CCCCccE
Confidence            899999999999999999999999999998753322    23333332   11 11  22222  2233333 2246999


Q ss_pred             EEEcccc
Q 025786          149 VMHFAAV  155 (248)
Q Consensus       149 li~~Ag~  155 (248)
                      +|+++|.
T Consensus       221 v~d~~g~  227 (346)
T 3fbg_A          221 VFCTFNT  227 (346)
T ss_dssp             EEESSCH
T ss_pred             EEECCCc
Confidence            9999873

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=97.50  E-value=0.00016  Score=62.08  Aligned_cols=73  Identities=18%  Similarity=0.259  Sum_probs=48.8

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCC--HHHHHHHhhcCCCCE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD--AKAVNKFFSENAFDA  148 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~iD~  148 (248)
                      ++|+|+|+ |+||..+++.+...|++|++++++....++ .+..+++.     +..+  | .+  .+.+.+ .. .++|+
T Consensus       182 ~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~-~~~~~~~g-----a~~v--~-~~~~~~~~~~-~~-~~~d~  249 (366)
T 2cdc_A          182 RKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVE-QTVIEETK-----TNYY--N-SSNGYDKLKD-SV-GKFDV  249 (366)
T ss_dssp             CEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHH-HHHHHHHT-----CEEE--E-CTTCSHHHHH-HH-CCEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHH-HHHHHHhC-----Ccee--c-hHHHHHHHHH-hC-CCCCE
Confidence            89999999 999999999999999999999865410011 22333332     2223  4 43  223443 22 57999


Q ss_pred             EEEcccc
Q 025786          149 VMHFAAV  155 (248)
Q Consensus       149 li~~Ag~  155 (248)
                      +|+++|.
T Consensus       250 vid~~g~  256 (366)
T 2cdc_A          250 IIDATGA  256 (366)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9999984

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=97.49  E-value=0.0004  Score=59.69  Aligned_cols=75  Identities=19%  Similarity=0.209  Sum_probs=49.3

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li  150 (248)
                      ++|+|+||+|+||..+++.+...|++|+++++ ..+    .+..+++.   ... .  .|..+.+..+++.+..++|++|
T Consensus       185 ~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~~-~~~----~~~~~~lG---a~~-v--~~~~~~~~~~~~~~~~g~D~vi  253 (375)
T 2vn8_A          185 KRVLILGASGGVGTFAIQVMKAWDAHVTAVCS-QDA----SELVRKLG---ADD-V--IDYKSGSVEEQLKSLKPFDFIL  253 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC-GGG----HHHHHHTT---CSE-E--EETTSSCHHHHHHTSCCBSEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEeC-hHH----HHHHHHcC---CCE-E--EECCchHHHHHHhhcCCCCEEE
Confidence            89999999999999999999899999988773 221    22333332   121 2  2444433233333335799999


Q ss_pred             Eccccc
Q 025786          151 HFAAVA  156 (248)
Q Consensus       151 ~~Ag~~  156 (248)
                      +++|..
T Consensus       254 d~~g~~  259 (375)
T 2vn8_A          254 DNVGGS  259 (375)
T ss_dssp             ESSCTT
T ss_pred             ECCCCh
Confidence            999853

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=97.44  E-value=0.00061  Score=56.73  Aligned_cols=115  Identities=13%  Similarity=0.151  Sum_probs=68.9

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC--EEEEEecCCCCcchhhhhhhhhc-CCCCceEEEEccCCCHHHHHHHhhcCCCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELF-PEPGRLQFIYADLGDAKAVNKFFSENAFD  147 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD  147 (248)
                      |+|.|+|+ |.+|..++..|+..|.  +|+++|+.....+.....+.... ..+....+...  +|+    +.++  +.|
T Consensus         1 MkI~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d~----~a~~--~aD   71 (294)
T 1oju_A            1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--ADY----SLLK--GSE   71 (294)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEE--SCG----GGGT--TCS
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEe--CCH----HHhC--CCC
Confidence            46899998 9999999999999998  89999865432221111111111 01112222211  133    2333  579


Q ss_pred             EEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCC-CEEEEecc
Q 025786          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV-DTLIYSST  196 (248)
Q Consensus       148 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~-~~iV~~SS  196 (248)
                      +||..||....  ...+..+.+..|......+.+.+.+..+ ..|+.+|.
T Consensus        72 iVViaag~~~k--pG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvsN  119 (294)
T 1oju_A           72 IIVVTAGLARK--PGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTN  119 (294)
T ss_dssp             EEEECCCCCCC--SSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSS
T ss_pred             EEEECCCCCCC--CCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeCC
Confidence            99999986432  2234456667777777778888877654 34555553

>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*

Probab=97.44  E-value=0.0018  Score=54.25  Aligned_cols=114  Identities=19%  Similarity=0.153  Sum_probs=69.6

Q ss_pred             eEEEEecCCchhHHHHHHHHHHC-C--CEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEc-cCCCHHHHHHHhhcCCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKD-S--YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYA-DLGDAKAVNKFFSENAF  146 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~-G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-Dl~~~~~~~~~~~~~~i  146 (248)
                      |+|.|+||+|.+|..++..|..+ +  .+++++|... ..+   ....++............ .-.+++++    +  +.
T Consensus         1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~-~~~---G~a~Dl~~~~~~~~v~~~~~~~~~~~~----~--~a   70 (312)
T 3hhp_A            1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTP---GVAVDLSHIPTAVKIKGFSGEDATPAL----E--GA   70 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST-THH---HHHHHHHTSCSSEEEEEECSSCCHHHH----T--TC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC-Cch---hHHHHhhCCCCCceEEEecCCCcHHHh----C--CC
Confidence            47899999999999999999875 5  4888888643 211   222222221222222211 11234333    2  68


Q ss_pred             CEEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCC-CEEEEecc
Q 025786          147 DAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV-DTLIYSST  196 (248)
Q Consensus       147 D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~-~~iV~~SS  196 (248)
                      |++|-.||...  ....+..+.+..|......+.+.+.+..+ ..++.+|.
T Consensus        71 Divii~ag~~r--kpG~~R~dll~~N~~I~~~i~~~i~~~~p~a~vlvvtN  119 (312)
T 3hhp_A           71 DVVLISAGVAR--KPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIITN  119 (312)
T ss_dssp             SEEEECCSCSC--CTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECSS
T ss_pred             CEEEEeCCCCC--CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEecC
Confidence            99999999642  22345566777887777778888777653 35555553

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=97.41  E-value=0.00017  Score=62.18  Aligned_cols=75  Identities=24%  Similarity=0.172  Sum_probs=52.2

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~l  149 (248)
                      +++|+|+|+ |.||+.+++.+...|++|++.+++..+.   . ..++..  +..+   ..+..+.+++.+.+.  +.|+|
T Consensus       168 g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l---~-~~~~~~--g~~~---~~~~~~~~~l~~~l~--~aDvV  235 (377)
T 2vhw_A          168 PADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKL---R-QLDAEF--CGRI---HTRYSSAYELEGAVK--RADLV  235 (377)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHH---H-HHHHHT--TTSS---EEEECCHHHHHHHHH--HCSEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHH---H-HHHHhc--CCee---EeccCCHHHHHHHHc--CCCEE
Confidence            389999998 9999999999999999999998643221   1 122211  1122   233455667777776  57999


Q ss_pred             EEccccc
Q 025786          150 MHFAAVA  156 (248)
Q Consensus       150 i~~Ag~~  156 (248)
                      |++++..
T Consensus       236 i~~~~~p  242 (377)
T 2vhw_A          236 IGAVLVP  242 (377)
T ss_dssp             EECCCCT
T ss_pred             EECCCcC
Confidence            9988753

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=97.40  E-value=0.0017  Score=54.73  Aligned_cols=114  Identities=19%  Similarity=0.114  Sum_probs=68.2

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC-EEEEEecCCCCcchhhhhhhhhcC-CCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFP-EPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~  148 (248)
                      ++|.|+| +|.+|..++..|+..|. +|+++|+.....+.....+.+... ......+...  .|++    .++  +.|+
T Consensus         6 ~kI~iiG-aG~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t--~d~~----a~~--~aDv   76 (321)
T 3p7m_A            6 KKITLVG-AGNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGT--NDYK----DLE--NSDV   76 (321)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE--SCGG----GGT--TCSE
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEc--CCHH----HHC--CCCE
Confidence            6899999 59999999999999988 999998754332221112222100 0111222211  1232    333  5799


Q ss_pred             EEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCC-EEEEec
Q 025786          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD-TLIYSS  195 (248)
Q Consensus       149 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~-~iV~~S  195 (248)
                      ||..||....  ...+..+.+..|......+.+.+.+..+. .++.+|
T Consensus        77 VIi~ag~p~k--~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvt  122 (321)
T 3p7m_A           77 VIVTAGVPRK--PGMSRDDLLGINIKVMQTVGEGIKHNCPNAFVICIT  122 (321)
T ss_dssp             EEECCSCCCC--TTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             EEEcCCcCCC--CCCCHHHHHHHhHHHHHHHHHHHHHHCCCcEEEEec
Confidence            9999986432  22344556667777777788877776543 555554

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=97.37  E-value=0.0002  Score=57.41  Aligned_cols=69  Identities=16%  Similarity=0.108  Sum_probs=52.2

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHH-hhcCCCCEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKF-FSENAFDAV  149 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~~iD~l  149 (248)
                      ++++|.|+ |.+|+.+++.|.++|+ |+++++++.   .. +   ...   ..+.++.+|.+|.+.+.++ ++  +.|.|
T Consensus        10 ~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~~---~~-~---~~~---~~~~~i~gd~~~~~~l~~a~i~--~ad~v   75 (234)
T 2aef_A           10 RHVVICGW-SESTLECLRELRGSEV-FVLAEDENV---RK-K---VLR---SGANFVHGDPTRVSDLEKANVR--GARAV   75 (234)
T ss_dssp             CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGGG---HH-H---HHH---TTCEEEESCTTCHHHHHHTTCT--TCSEE
T ss_pred             CEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCHH---HH-H---HHh---cCCeEEEcCCCCHHHHHhcCcc--hhcEE
Confidence            68999997 9999999999999999 998875322   11 1   111   2477899999999888766 43  67998


Q ss_pred             EEcc
Q 025786          150 MHFA  153 (248)
Q Consensus       150 i~~A  153 (248)
                      |.+.
T Consensus        76 i~~~   79 (234)
T 2aef_A           76 IVDL   79 (234)
T ss_dssp             EECC
T ss_pred             EEcC
Confidence            8764

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.36  E-value=5.1e-05  Score=56.18  Aligned_cols=70  Identities=14%  Similarity=0.288  Sum_probs=46.4

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li  150 (248)
                      ++|+|.|+ |.+|+.+++.|.+.|++|++++|+..+   ..+..+++.     ....  +..+   +.+.++  +.|+||
T Consensus        22 ~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~---~~~~a~~~~-----~~~~--~~~~---~~~~~~--~~Divi   85 (144)
T 3oj0_A           22 NKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDH---VRAFAEKYE-----YEYV--LIND---IDSLIK--NNDVII   85 (144)
T ss_dssp             CEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHH---HHHHHHHHT-----CEEE--ECSC---HHHHHH--TCSEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHH---HHHHHHHhC-----CceE--eecC---HHHHhc--CCCEEE
Confidence            89999995 999999999999999998888864332   222222221     1211  2223   344444  579999


Q ss_pred             Eccccc
Q 025786          151 HFAAVA  156 (248)
Q Consensus       151 ~~Ag~~  156 (248)
                      ++.+..
T Consensus        86 ~at~~~   91 (144)
T 3oj0_A           86 TATSSK   91 (144)
T ss_dssp             ECSCCS
T ss_pred             EeCCCC
Confidence            987643

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=97.35  E-value=0.00034  Score=59.99  Aligned_cols=73  Identities=14%  Similarity=0.192  Sum_probs=50.5

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li  150 (248)
                      ++|+|+|+ |+||..+++.+...|++|++++++..+.   ....+++   +.. .  ..|..+.+.+.++.  +++|++|
T Consensus       189 ~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~---~~~~~~l---Ga~-~--v~~~~~~~~~~~~~--~~~D~vi  256 (366)
T 1yqd_A          189 KHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKK---EEALKNF---GAD-S--FLVSRDQEQMQAAA--GTLDGII  256 (366)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGH---HHHHHTS---CCS-E--EEETTCHHHHHHTT--TCEEEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHH---HHHHHhc---CCc-e--EEeccCHHHHHHhh--CCCCEEE
Confidence            79999996 9999999999999999999988643322   1111122   111 1  24666666666554  3799999


Q ss_pred             Ecccc
Q 025786          151 HFAAV  155 (248)
Q Consensus       151 ~~Ag~  155 (248)
                      +++|.
T Consensus       257 d~~g~  261 (366)
T 1yqd_A          257 DTVSA  261 (366)
T ss_dssp             ECCSS
T ss_pred             ECCCc
Confidence            99984

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}

Probab=97.35  E-value=0.00094  Score=55.84  Aligned_cols=110  Identities=18%  Similarity=0.183  Sum_probs=59.8

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC--EEEEEecCCCCcchhhhhhhhhcCC---CCceEEEEccCCCHHHHHHHhhcCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELFPE---PGRLQFIYADLGDAKAVNKFFSENA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~  145 (248)
                      ++|.|+|+ |.+|..++..|+..|+  +|+++|+...   .+.....++...   .....+..   .+.+    .++  +
T Consensus         1 mkI~VIGa-G~vG~~la~~la~~g~~~eV~L~D~~~~---~~~~~~~~l~~~~~~~~~~~i~~---~~~~----a~~--~   67 (304)
T 2v6b_A            1 MKVGVVGT-GFVGSTAAFALVLRGSCSELVLVDRDED---RAQAEAEDIAHAAPVSHGTRVWH---GGHS----ELA--D   67 (304)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHH---HHHHHHHHHTTSCCTTSCCEEEE---ECGG----GGT--T
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCHH---HHHHHHHhhhhhhhhcCCeEEEE---CCHH----HhC--C
Confidence            47899998 9999999999999998  9999986432   122212222111   11222221   2322    233  6


Q ss_pred             CCEEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCC-EEEEec
Q 025786          146 FDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD-TLIYSS  195 (248)
Q Consensus       146 iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~-~iV~~S  195 (248)
                      .|+||.+++.....  ...-.+....|......+.+.+.+.... .+|++|
T Consensus        68 aDvVIi~~~~~~~~--g~~r~dl~~~n~~i~~~i~~~i~~~~p~~~vi~~t  116 (304)
T 2v6b_A           68 AQVVILTAGANQKP--GESRLDLLEKNADIFRELVPQITRAAPDAVLLVTS  116 (304)
T ss_dssp             CSEEEECC--------------CHHHHHHHHHHHHHHHHHHCSSSEEEECS
T ss_pred             CCEEEEcCCCCCCC--CCcHHHHHHhHHHHHHHHHHHHHHhCCCeEEEEec
Confidence            79999999864321  1222344556666666677777665433 444433

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=97.33  E-value=0.0024  Score=53.67  Aligned_cols=113  Identities=17%  Similarity=0.155  Sum_probs=69.1

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC-EEEEEecCC--CCcchhhhhhhhh---cCCCCceEEEEccCCCHHHHHHHhhcC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLS--RGNIGAVKVLQEL---FPEPGRLQFIYADLGDAKAVNKFFSEN  144 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~-~V~~~~r~~--~~~~~~~~~~~~~---~~~~~~~~~~~~Dl~~~~~~~~~~~~~  144 (248)
                      ++|.|+|+ |.+|..++..|+..|. +|+++|+..  ...+.....+.+.   .....++..  .  +|++    .++  
T Consensus         9 ~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~--t--~d~~----a~~--   77 (315)
T 3tl2_A            9 KKVSVIGA-GFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIG--T--SDYA----DTA--   77 (315)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEE--E--SCGG----GGT--
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEE--c--CCHH----HhC--
Confidence            68999996 9999999999999999 999998642  1111111111111   011122221  1  1222    233  


Q ss_pred             CCCEEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCC-EEEEecc
Q 025786          145 AFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD-TLIYSST  196 (248)
Q Consensus       145 ~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~-~iV~~SS  196 (248)
                      +.|+||..||....  ...+..+.+..|......+.+.+.+..+. .++.+|.
T Consensus        78 ~aDvVIiaag~p~k--pg~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vlvvsN  128 (315)
T 3tl2_A           78 DSDVVVITAGIARK--PGMSRDDLVATNSKIMKSITRDIAKHSPNAIIVVLTN  128 (315)
T ss_dssp             TCSEEEECCSCCCC--TTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred             CCCEEEEeCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEECCC
Confidence            68999999996432  22344566777777777888888776543 5555553

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=97.32  E-value=0.00088  Score=55.61  Aligned_cols=81  Identities=17%  Similarity=0.228  Sum_probs=55.5

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC-EEEEEecCC------------------CCcchhhhhhhhhcCCCCceEEEEccC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLS------------------RGNIGAVKVLQELFPEPGRLQFIYADL  131 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~-~V~~~~r~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~Dl  131 (248)
                      .+|+|.| .||+|.++++.|+..|. ++.++|...                  .+.+.+.+.++++.+ ..+++.+..++
T Consensus        37 ~~VlVvG-aGGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP-~v~v~~~~~~l  114 (292)
T 3h8v_A           37 FAVAIVG-VGGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINP-DVLFEVHNYNI  114 (292)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCT-TSEEEEECCCT
T ss_pred             CeEEEEC-cCHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCC-CcEEEEecccC
Confidence            7899998 59999999999999996 888888543                  112223333444432 33567777788


Q ss_pred             CCHHHHHHHhhc---------CCCCEEEEcc
Q 025786          132 GDAKAVNKFFSE---------NAFDAVMHFA  153 (248)
Q Consensus       132 ~~~~~~~~~~~~---------~~iD~li~~A  153 (248)
                      ++.+.+.++++.         .++|+||.+.
T Consensus       115 ~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~  145 (292)
T 3h8v_A          115 TTVENFQHFMDRISNGGLEEGKPVDLVLSCV  145 (292)
T ss_dssp             TSHHHHHHHHHHHHHBSSSTTBCCSEEEECC
T ss_pred             CcHHHHHHHhhhhcccccccCCCCCEEEECC
Confidence            877777766531         2689999654

>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}

Probab=97.31  E-value=0.00062  Score=57.21  Aligned_cols=115  Identities=17%  Similarity=0.086  Sum_probs=67.3

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC--EEEEEecCCCCcchhhhhhhhhc-CCCCceEEEEccCCCHHHHHHHhhcCCCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELF-PEPGRLQFIYADLGDAKAVNKFFSENAFD  147 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD  147 (248)
                      |+|.|+|+ |.+|..++..|+..|.  +|+++|+.....+.....+.+.. .......+...|  +++    .++  +.|
T Consensus         1 Mkv~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~--~~~----a~~--~aD   71 (314)
T 3nep_X            1 MKVTVIGA-GNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTN--DYG----PTE--DSD   71 (314)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEES--SSG----GGT--TCS
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECC--CHH----HhC--CCC
Confidence            46889996 9999999999999987  89999875433221111122210 001122222112  232    233  679


Q ss_pred             EEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCC-EEEEecc
Q 025786          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD-TLIYSST  196 (248)
Q Consensus       148 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~-~iV~~SS  196 (248)
                      ++|..||....  ...+..+.+..|......+.+.+.+..+. .++.+|.
T Consensus        72 vVii~ag~~~k--pG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvtN  119 (314)
T 3nep_X           72 VCIITAGLPRS--PGMSRDDLLAKNTEIVGGVTEQFVEGSPDSTIIVVAN  119 (314)
T ss_dssp             EEEECCCC---------CHHHHHHHHHHHHHHHHHHHTTCTTCEEEECCS
T ss_pred             EEEECCCCCCC--CCCCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEecCC
Confidence            99999996432  22344566777777778888888876543 5555553

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=97.31  E-value=0.00035  Score=58.84  Aligned_cols=72  Identities=24%  Similarity=0.267  Sum_probs=45.6

Q ss_pred             EEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHH--HHHHHhhcCCCCEE
Q 025786           72 HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAK--AVNKFFSENAFDAV  149 (248)
Q Consensus        72 ~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~--~~~~~~~~~~iD~l  149 (248)
                      +|+|+||+|++|...++.+...|++|++++++..+.    +..+++.   ... .  .|..+.+  .+.++ ...++|++
T Consensus       152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~----~~~~~lG---a~~-~--i~~~~~~~~~~~~~-~~~~~d~v  220 (328)
T 1xa0_A          152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEH----DYLRVLG---AKE-V--LAREDVMAERIRPL-DKQRWAAA  220 (328)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCH----HHHHHTT---CSE-E--EECC---------C-CSCCEEEE
T ss_pred             eEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHH----HHHHHcC---CcE-E--EecCCcHHHHHHHh-cCCcccEE
Confidence            799999999999999999989999999988654332    2223332   111 1  2443331  12222 22469999


Q ss_pred             EEccc
Q 025786          150 MHFAA  154 (248)
Q Consensus       150 i~~Ag  154 (248)
                      |+++|
T Consensus       221 id~~g  225 (328)
T 1xa0_A          221 VDPVG  225 (328)
T ss_dssp             EECST
T ss_pred             EECCc
Confidence            99987

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=97.30  E-value=0.00029  Score=59.69  Aligned_cols=72  Identities=18%  Similarity=0.075  Sum_probs=48.2

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCH---HHHHHHhhcCCCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDA---KAVNKFFSENAFD  147 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~---~~~~~~~~~~~iD  147 (248)
                      ++|+|+|+ |+||..+++.+...|++|++++++..+.    +..+++.   ..   ...|..+.   +.+.+..  +++|
T Consensus       166 ~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~----~~~~~lG---a~---~~~d~~~~~~~~~~~~~~--~~~d  232 (339)
T 1rjw_A          166 EWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKL----ELAKELG---AD---LVVNPLKEDAAKFMKEKV--GGVH  232 (339)
T ss_dssp             CEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHH----HHHHHTT---CS---EEECTTTSCHHHHHHHHH--SSEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHH----HHHHHCC---CC---EEecCCCccHHHHHHHHh--CCCC
Confidence            79999999 8899999999999999999988543222    2223332   11   12455543   2333332  4799


Q ss_pred             EEEEcccc
Q 025786          148 AVMHFAAV  155 (248)
Q Consensus       148 ~li~~Ag~  155 (248)
                      ++|+++|.
T Consensus       233 ~vid~~g~  240 (339)
T 1rjw_A          233 AAVVTAVS  240 (339)
T ss_dssp             EEEESSCC
T ss_pred             EEEECCCC
Confidence            99999883

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=97.28  E-value=0.00052  Score=60.63  Aligned_cols=33  Identities=27%  Similarity=0.238  Sum_probs=30.3

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNL  103 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~  103 (248)
                      .+|+|+||+|+||...+..+...|++|++++++
T Consensus       230 ~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~  262 (456)
T 3krt_A          230 DNVLIWGASGGLGSYATQFALAGGANPICVVSS  262 (456)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CEEEEECCCCHHHHHHHHHHHHcCCeEEEEECC
Confidence            899999999999999999999999999988753

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=97.27  E-value=0.00025  Score=58.55  Aligned_cols=67  Identities=15%  Similarity=0.157  Sum_probs=46.6

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC-EEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~l  149 (248)
                      ++++|+|+ |++|++++..|++.|+ +|++++|+..+.+++.          ..+...     ..+++.+.+.  ..|+|
T Consensus       118 k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la----------~~~~~~-----~~~~~~~~~~--~aDiV  179 (277)
T 3don_A          118 AYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFNNWS----------LNINKI-----NLSHAESHLD--EFDII  179 (277)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCC----------SCCEEE-----CHHHHHHTGG--GCSEE
T ss_pred             CEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHH----------Hhcccc-----cHhhHHHHhc--CCCEE
Confidence            89999996 8999999999999999 8999887544332211          112211     3455655555  57999


Q ss_pred             EEcccc
Q 025786          150 MHFAAV  155 (248)
Q Consensus       150 i~~Ag~  155 (248)
                      ||+-..
T Consensus       180 InaTp~  185 (277)
T 3don_A          180 INTTPA  185 (277)
T ss_dssp             EECCC-
T ss_pred             EECccC
Confidence            998654

>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1

Probab=97.27  E-value=0.0035  Score=52.90  Aligned_cols=115  Identities=14%  Similarity=0.103  Sum_probs=69.6

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCC--EEEEEecCCCCcchhhhhhhhhcCCCCceEEE-EccCCCHHHHHHHhhcCCC
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFI-YADLGDAKAVNKFFSENAF  146 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~Dl~~~~~~~~~~~~~~i  146 (248)
                      .++|.|+|+ |.+|..++..|+..|.  +|+++|......+.....+.+........... ..|.   ++    ++  +.
T Consensus        21 ~~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~---~~----~~--da   90 (330)
T 3ldh_A           21 YNKITVVGC-DAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDY---SV----SA--GS   90 (330)
T ss_dssp             CCEEEEEST-THHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEESSS---CS----CS--SC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEcCCH---HH----hC--CC
Confidence            378999998 9999999999999997  89999864322221111122211111111222 2333   21    22  67


Q ss_pred             CEEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCC-EEEEecc
Q 025786          147 DAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD-TLIYSST  196 (248)
Q Consensus       147 D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~-~iV~~SS  196 (248)
                      |+||-.||....  ...+..+.+..|......+.+.+.+..+. .++.+|.
T Consensus        91 DiVIitaG~p~k--pG~tR~dll~~N~~I~k~i~~~I~k~~P~a~ilvvtN  139 (330)
T 3ldh_A           91 KLVVITAGARQQ--EGESRLNLVQRNVNIFKFIIPNIVKHSPDCLKELHPE  139 (330)
T ss_dssp             SEEEECCSCCCC--SSCCTTGGGHHHHHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred             CEEEEeCCCCCC--CCCCHHHHHHhhHHHHHHHHHHHHhhCCCceEEeCCC
Confidence            999999997532  22344566777777777788888776543 4555553

>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*

Probab=97.25  E-value=0.0022  Score=53.90  Aligned_cols=113  Identities=19%  Similarity=0.198  Sum_probs=65.6

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC--EEEEEecCCCCcchhhhhhhhhcCC-CCceEEEEccCCCHHHHHHHhhcCCCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELFPE-PGRLQFIYADLGDAKAVNKFFSENAFD  147 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~iD  147 (248)
                      ++|.|+|+ |.+|..++..|+.+|.  +|+++|....+.+.....+....+. +..+.+.. |  +.++    ++  +.|
T Consensus         7 ~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~-~--~~~a----~~--~aD   76 (317)
T 3d0o_A            7 NKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVKA-G--EYSD----CH--DAD   76 (317)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEEE-C--CGGG----GT--TCS
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEEe-C--CHHH----hC--CCC
Confidence            68999998 9999999999998884  8999886432221111111111111 12333332 2  3332    33  689


Q ss_pred             EEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCC-EEEEec
Q 025786          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD-TLIYSS  195 (248)
Q Consensus       148 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~-~iV~~S  195 (248)
                      +||..+|.....  ...-.+....|......+.+.+.+..+. .+|++|
T Consensus        77 vVvi~ag~~~~~--g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~t  123 (317)
T 3d0o_A           77 LVVICAGAAQKP--GETRLDLVSKNLKIFKSIVGEVMASKFDGIFLVAT  123 (317)
T ss_dssp             EEEECCCCCCCT--TCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             EEEECCCCCCCC--CCcHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEec
Confidence            999999864321  2233345566666666777777766543 444443

>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*

Probab=97.22  E-value=0.0014  Score=54.42  Aligned_cols=115  Identities=13%  Similarity=0.162  Sum_probs=69.5

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC--EEEEEecCCCCcchhhhhhhhhcC-CCCceEEEEccCCCHHHHHHHhhcCCCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELFP-EPGRLQFIYADLGDAKAVNKFFSENAFD  147 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~iD  147 (248)
                      |+|.|+|+ |+||..++..|+.++.  +++++|......+.....+..... .+........  .|+++    ++  +.|
T Consensus         1 MKV~IiGa-G~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~--~d~~~----~~--~aD   71 (294)
T 2x0j_A            1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--ADYSL----LK--GSE   71 (294)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEE--SCGGG----GT--TCS
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecC--CCHHH----hC--CCC
Confidence            46888895 9999999999988874  799988643221111111222110 1112222222  13333    22  579


Q ss_pred             EEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCC-EEEEecc
Q 025786          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD-TLIYSST  196 (248)
Q Consensus       148 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~-~iV~~SS  196 (248)
                      +||-.||...  ....+..+.+..|......+.+.+.+..+. .++.+|.
T Consensus        72 vVvitAG~pr--kpGmtR~dLl~~Na~I~~~i~~~i~~~~p~aivlvvsN  119 (294)
T 2x0j_A           72 IIVVTAGLAR--KPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTN  119 (294)
T ss_dssp             EEEECCCCCC--CSSSCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSS
T ss_pred             EEEEecCCCC--CCCCchHHHHHHHHHHHHHHHHHHHhcCCceEEEEecC
Confidence            9999999653  223456677888888888888888887654 4444543

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=97.20  E-value=0.0012  Score=56.19  Aligned_cols=76  Identities=17%  Similarity=0.138  Sum_probs=48.5

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEcc--CCCHHHHHHHhh---cCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYAD--LGDAKAVNKFFS---ENA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D--l~~~~~~~~~~~---~~~  145 (248)
                      ++|+|+|+ |++|...++.+...|++|++++++..+    .+..+++.   .. ..+..+  -...+.+.+...   ..+
T Consensus       170 ~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~----~~~~~~lG---a~-~~~~~~~~~~~~~~i~~~~~~~~g~g  240 (352)
T 1e3j_A          170 TTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRR----LEVAKNCG---AD-VTLVVDPAKEEESSIIERIRSAIGDL  240 (352)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHH----HHHHHHTT---CS-EEEECCTTTSCHHHHHHHHHHHSSSC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCEEEEEcCCHHH----HHHHHHhC---CC-EEEcCcccccHHHHHHHHhccccCCC
Confidence            89999996 999999999888899999888753322    22233332   12 222211  122345555443   246


Q ss_pred             CCEEEEcccc
Q 025786          146 FDAVMHFAAV  155 (248)
Q Consensus       146 iD~li~~Ag~  155 (248)
                      +|++|+++|.
T Consensus       241 ~D~vid~~g~  250 (352)
T 1e3j_A          241 PNVTIDCSGN  250 (352)
T ss_dssp             CSEEEECSCC
T ss_pred             CCEEEECCCC
Confidence            9999999873

>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*

Probab=97.20  E-value=0.004  Score=52.27  Aligned_cols=113  Identities=16%  Similarity=0.196  Sum_probs=65.1

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCC--EEEEEecCCCCcchhhhhhhhhcCC-CCceEEEEccCCCHHHHHHHhhcCCC
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELFPE-PGRLQFIYADLGDAKAVNKFFSENAF  146 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~i  146 (248)
                      +++|.|+|+ |.+|..++..|+..|.  +|+++|++....+.....+.+.... ...+.+.. |  +.+    .++  +.
T Consensus         6 ~~kI~IIGa-G~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~~-~--~~~----al~--~a   75 (316)
T 1ldn_A            6 GARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWH-G--DYD----DCR--DA   75 (316)
T ss_dssp             SCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEE-C--CGG----GTT--TC
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEEc-C--cHH----HhC--CC
Confidence            378999998 9999999999998874  8999986532111111112221111 11333332 2  222    233  67


Q ss_pred             CEEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCC-EEEEe
Q 025786          147 DAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD-TLIYS  194 (248)
Q Consensus       147 D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~-~iV~~  194 (248)
                      |+||.++++..... . ...+.+..|......+.+.+.+..+. .++++
T Consensus        76 DvViia~~~~~~~g-~-~r~dl~~~n~~i~~~i~~~i~~~~p~a~~iv~  122 (316)
T 1ldn_A           76 DLVVICAGANQKPG-E-TRLDLVDKNIAIFRSIVESVMASGFQGLFLVA  122 (316)
T ss_dssp             SEEEECCSCCCCTT-T-CSGGGHHHHHHHHHHHHHHHHHHTCCSEEEEC
T ss_pred             CEEEEcCCCCCCCC-C-CHHHHHHcChHHHHHHHHHHHHHCCCCEEEEe
Confidence            99999998754322 1 22444556666666677777665433 34443

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=97.16  E-value=0.0004  Score=59.05  Aligned_cols=74  Identities=15%  Similarity=0.167  Sum_probs=47.7

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC-EEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHH---HHHHHhhcCCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAK---AVNKFFSENAF  146 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~---~~~~~~~~~~i  146 (248)
                      ++|+|+|+ |+||..+++.+...|+ +|++++++..+    .+..+++.   .. ..  .|..+.+   .+.++....++
T Consensus       169 ~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~----~~~~~~~G---a~-~~--~~~~~~~~~~~v~~~~~g~g~  237 (348)
T 2d8a_A          169 KSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFR----RELAKKVG---AD-YV--INPFEEDVVKEVMDITDGNGV  237 (348)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHH----HHHHHHHT---CS-EE--ECTTTSCHHHHHHHHTTTSCE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHH----HHHHHHhC---CC-EE--ECCCCcCHHHHHHHHcCCCCC
Confidence            78999999 9999999999999999 99998854322    22233332   11 11  3443322   23333222369


Q ss_pred             CEEEEcccc
Q 025786          147 DAVMHFAAV  155 (248)
Q Consensus       147 D~li~~Ag~  155 (248)
                      |++|+++|.
T Consensus       238 D~vid~~g~  246 (348)
T 2d8a_A          238 DVFLEFSGA  246 (348)
T ss_dssp             EEEEECSCC
T ss_pred             CEEEECCCC
Confidence            999999873

>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}

Probab=97.16  E-value=0.0077  Score=51.15  Aligned_cols=115  Identities=15%  Similarity=0.120  Sum_probs=69.4

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC-------EEEEEecCCCCcchhh---hhhhhhcCCCCceEEEEccCCCHHHHHHH
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY-------RVTIVDNLSRGNIGAV---KVLQELFPEPGRLQFIYADLGDAKAVNKF  140 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~-------~V~~~~r~~~~~~~~~---~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~  140 (248)
                      -+|.||||+|+||..++..|+....       ++.++|.... ...+.   -.+... ..+.....+..+  |   ..+.
T Consensus        25 vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~-~~~~~Gva~DL~~~-~~~~~~~~~~~~--~---~~~a   97 (345)
T 4h7p_A           25 VKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPA-LKALAGVEAELEDC-AFPLLDKVVVTA--D---PRVA   97 (345)
T ss_dssp             EEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGG-HHHHHHHHHHHHHT-TCTTEEEEEEES--C---HHHH
T ss_pred             CEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCc-cccchhhhhhhhhc-CccCCCcEEEcC--C---hHHH
Confidence            5899999999999999998887642       6788774221 11111   122222 111122222221  2   2334


Q ss_pred             hhcCCCCEEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcC-CC-EEEEecc
Q 025786          141 FSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHG-VD-TLIYSST  196 (248)
Q Consensus       141 ~~~~~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~-~~-~iV~~SS  196 (248)
                      ++  +.|++|-.||...  ....+-.+.+..|......+.+.+.+.. .. +|+.+|.
T Consensus        98 ~~--~advVvi~aG~pr--kpGmtR~DLl~~Na~I~~~~~~~i~~~a~~~~~vlvvsN  151 (345)
T 4h7p_A           98 FD--GVAIAIMCGAFPR--KAGMERKDLLEMNARIFKEQGEAIAAVAASDCRVVVVGN  151 (345)
T ss_dssp             TT--TCSEEEECCCCCC--CTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred             hC--CCCEEEECCCCCC--CCCCCHHHHHHHhHHHHHHHHHHHHhhccCceEEEEeCC
Confidence            44  6899999999753  2234566778888888888888887753 33 4455553

>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*

Probab=97.15  E-value=0.0069  Score=50.97  Aligned_cols=114  Identities=11%  Similarity=0.077  Sum_probs=63.7

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC-EEEEEecCCCCcchhhhhhhhh---cCCCCceEEEEccCCCHHHHHHHhhcCCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQEL---FPEPGRLQFIYADLGDAKAVNKFFSENAF  146 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~~~~Dl~~~~~~~~~~~~~~i  146 (248)
                      ++|.|+|+ |.+|..++..|+..|. +|+++|++....+.....+...   .....++...    +|.+    .++  +.
T Consensus         5 ~kI~VIGa-G~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t----~d~~----al~--~a   73 (322)
T 1t2d_A            5 AKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGS----NTYD----DLA--GA   73 (322)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEE----CCGG----GGT--TC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEEC----CCHH----HhC--CC
Confidence            68999998 9999999999999998 9888886543322211112111   0112223221    2222    233  67


Q ss_pred             CEEEEcccccccCCCC---CCchhhHhhhHHHHHHHHHHHHHcCCC-EEEEec
Q 025786          147 DAVMHFAAVAYVGEST---LDPLKYYHNITSNTLVVLESMARHGVD-TLIYSS  195 (248)
Q Consensus       147 D~li~~Ag~~~~~~~~---~~~~~~~~~~~~~~~~ll~~~~~~~~~-~iV~~S  195 (248)
                      |+||..+|........   ..-.+....|......+.+.+.+..+. .+|++|
T Consensus        74 D~Vi~a~g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t  126 (322)
T 1t2d_A           74 DVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIVVT  126 (322)
T ss_dssp             SEEEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred             CEEEEeCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            9999999864211110   002344455555566666666665433 444443

>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1

Probab=97.14  E-value=0.0022  Score=53.96  Aligned_cols=113  Identities=14%  Similarity=0.164  Sum_probs=63.8

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC--EEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~  148 (248)
                      ++|.|+|+ |.+|..++..|+..+.  +|+++|+...+.+.....+.+..+....+.+.. |  ++++    ++  +.|+
T Consensus         6 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~~-~--~~~a----~~--~aDv   75 (318)
T 1ez4_A            6 QKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYS-G--EYSD----CK--DADL   75 (318)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEE-C--CGGG----GT--TCSE
T ss_pred             CEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEEE-C--CHHH----hC--CCCE
Confidence            68999998 9999999999998886  899998643222211111222111112333332 2  3332    33  6799


Q ss_pred             EEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCC-CEEEEec
Q 025786          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV-DTLIYSS  195 (248)
Q Consensus       149 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~-~~iV~~S  195 (248)
                      ||..+|.....  ...-.+....|......+.+.+.+..+ ..|+++|
T Consensus        76 Vii~ag~~~~~--g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t  121 (318)
T 1ez4_A           76 VVITAGAPQKP--GESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAA  121 (318)
T ss_dssp             EEECCCC------------CHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             EEECCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeC
Confidence            99999874321  122334556666667777777776643 3555554

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=97.13  E-value=0.0011  Score=54.71  Aligned_cols=71  Identities=11%  Similarity=0.184  Sum_probs=46.5

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC-EEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~l  149 (248)
                      ++++|+|+ |++|++++..|++.|+ +|++++|+..+.+++.   +++... ..+.....     +++.     .+.|+|
T Consensus       127 k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la---~~~~~~-~~~~~~~~-----~~l~-----~~aDiI  191 (281)
T 3o8q_A          127 ATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKAEQLA---ELVAAY-GEVKAQAF-----EQLK-----QSYDVI  191 (281)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHH---HHHGGG-SCEEEEEG-----GGCC-----SCEEEE
T ss_pred             CEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHH---HHhhcc-CCeeEeeH-----HHhc-----CCCCEE
Confidence            89999997 8999999999999996 9999987543333332   222211 12333322     1111     267999


Q ss_pred             EEccccc
Q 025786          150 MHFAAVA  156 (248)
Q Consensus       150 i~~Ag~~  156 (248)
                      ||+-...
T Consensus       192 InaTp~g  198 (281)
T 3o8q_A          192 INSTSAS  198 (281)
T ss_dssp             EECSCCC
T ss_pred             EEcCcCC
Confidence            9987653

>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A

Probab=97.12  E-value=0.003  Score=52.95  Aligned_cols=114  Identities=17%  Similarity=0.086  Sum_probs=67.7

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCC--CEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDS--YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~  148 (248)
                      ++|.|+|+ |.+|..++..|+.++  .+|+++|+...+.+.....+.+..+....+.+.. |  ++++    ++  +.|+
T Consensus         1 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~~-~--~~~a----~~--~aD~   70 (310)
T 2xxj_A            1 MKVGIVGS-GMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVWA-G--SYGD----LE--GARA   70 (310)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEEE-C--CGGG----GT--TEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEEE-C--CHHH----hC--CCCE
Confidence            47899998 999999999999987  5899998643222211111111111012333332 2  3333    33  6799


Q ss_pred             EEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCC-CEEEEecc
Q 025786          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV-DTLIYSST  196 (248)
Q Consensus       149 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~-~~iV~~SS  196 (248)
                      ||..+|.....  ...-.+....|......+.+.+.+..+ ..|+++|-
T Consensus        71 Vii~ag~~~~~--g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tN  117 (310)
T 2xxj_A           71 VVLAAGVAQRP--GETRLQLLDRNAQVFAQVVPRVLEAAPEAVLLVATN  117 (310)
T ss_dssp             EEECCCCCCCT--TCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred             EEECCCCCCCC--CcCHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEecC
Confidence            99999864321  223345566676667778888777653 45555543

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=97.11  E-value=0.0036  Score=51.43  Aligned_cols=71  Identities=24%  Similarity=0.288  Sum_probs=46.8

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC-EEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~l  149 (248)
                      ++++|+|+ ||+|++++..|++.|+ +|++++|+..+   +.+..+++..  ..+..+  ++.   ++..    .+.|+|
T Consensus       121 k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~---a~~la~~~~~--~~~~~~--~~~---~l~~----~~~Div  185 (272)
T 3pwz_A          121 RRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAK---ALALRNELDH--SRLRIS--RYE---ALEG----QSFDIV  185 (272)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHH---HHHHHHHHCC--TTEEEE--CSG---GGTT----CCCSEE
T ss_pred             CEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHH---HHHHHHHhcc--CCeeEe--eHH---Hhcc----cCCCEE
Confidence            89999996 8999999999999996 99998865433   3333333322  233333  222   2211    368999


Q ss_pred             EEccccc
Q 025786          150 MHFAAVA  156 (248)
Q Consensus       150 i~~Ag~~  156 (248)
                      ||+-...
T Consensus       186 InaTp~g  192 (272)
T 3pwz_A          186 VNATSAS  192 (272)
T ss_dssp             EECSSGG
T ss_pred             EECCCCC
Confidence            9987543

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=97.11  E-value=0.00091  Score=57.20  Aligned_cols=75  Identities=15%  Similarity=0.106  Sum_probs=48.2

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCC-HHHHHHHhhcCCCCEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD-AKAVNKFFSENAFDAV  149 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~iD~l  149 (248)
                      ++|+|+| +|+||...+..+...|++|++++++..+    .+..+++.   .. ..+.-+-.+ .+.+.++....++|++
T Consensus       191 ~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~----~~~~~~lG---a~-~vi~~~~~~~~~~v~~~~~g~g~D~v  261 (363)
T 3uog_A          191 DRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREK----LDRAFALG---AD-HGINRLEEDWVERVYALTGDRGADHI  261 (363)
T ss_dssp             CEEEEES-SBHHHHHHHHHHHHTTCEEEEEESCHHH----HHHHHHHT---CS-EEEETTTSCHHHHHHHHHTTCCEEEE
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHcCCEEEEEecCchh----HHHHHHcC---CC-EEEcCCcccHHHHHHHHhCCCCceEE
Confidence            8999999 8999999999999999999998854322    22234442   11 122211112 2234444333479999


Q ss_pred             EEccc
Q 025786          150 MHFAA  154 (248)
Q Consensus       150 i~~Ag  154 (248)
                      |+++|
T Consensus       262 id~~g  266 (363)
T 3uog_A          262 LEIAG  266 (363)
T ss_dssp             EEETT
T ss_pred             EECCC
Confidence            99988

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=97.11  E-value=0.0016  Score=55.53  Aligned_cols=76  Identities=18%  Similarity=0.099  Sum_probs=50.7

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCE-EEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYR-VTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~----~~  145 (248)
                      ++|||+|+ |++|...++.+...|++ |++++++..+    .+..+++ .  ..+..+..|-.+.+++.+.+.+    .+
T Consensus       181 ~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~----~~~a~~l-~--~~~~~~~~~~~~~~~~~~~v~~~t~g~g  252 (363)
T 3m6i_A          181 DPVLICGA-GPIGLITMLCAKAAGACPLVITDIDEGR----LKFAKEI-C--PEVVTHKVERLSAEESAKKIVESFGGIE  252 (363)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCHHH----HHHHHHH-C--TTCEEEECCSCCHHHHHHHHHHHTSSCC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHH----HHHHHHh-c--hhcccccccccchHHHHHHHHHHhCCCC
Confidence            78999998 99999999888889997 8888754322    2233333 1  2333344554455555444432    47


Q ss_pred             CCEEEEccc
Q 025786          146 FDAVMHFAA  154 (248)
Q Consensus       146 iD~li~~Ag  154 (248)
                      +|++|.+.|
T Consensus       253 ~Dvvid~~g  261 (363)
T 3m6i_A          253 PAVALECTG  261 (363)
T ss_dssp             CSEEEECSC
T ss_pred             CCEEEECCC
Confidence            999999987

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=97.06  E-value=0.0013  Score=56.14  Aligned_cols=80  Identities=15%  Similarity=0.108  Sum_probs=48.1

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEcc-C--CC-HHHHHHHh--hcC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYAD-L--GD-AKAVNKFF--SEN  144 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D-l--~~-~~~~~~~~--~~~  144 (248)
                      .+|+|+||+|++|...+..+...|++|+++++...+.++..+.++++.   ... ++..+ .  .+ .+.+.++.  ...
T Consensus       169 ~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lG---a~~-vi~~~~~~~~~~~~~i~~~t~~~~~  244 (364)
T 1gu7_A          169 DWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELG---ATQ-VITEDQNNSREFGPTIKEWIKQSGG  244 (364)
T ss_dssp             CEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHT---CSE-EEEHHHHHCGGGHHHHHHHHHHHTC
T ss_pred             cEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHHhcC---CeE-EEecCccchHHHHHHHHHHhhccCC
Confidence            789999999999999988888889999888753322111122334442   111 12111 0  01 22344443  234


Q ss_pred             CCCEEEEccc
Q 025786          145 AFDAVMHFAA  154 (248)
Q Consensus       145 ~iD~li~~Ag  154 (248)
                      ++|++|.+.|
T Consensus       245 g~Dvvid~~G  254 (364)
T 1gu7_A          245 EAKLALNCVG  254 (364)
T ss_dssp             CEEEEEESSC
T ss_pred             CceEEEECCC
Confidence            6999999987

>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1

Probab=97.04  E-value=0.0043  Score=52.17  Aligned_cols=113  Identities=19%  Similarity=0.184  Sum_probs=62.9

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC--EEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~  148 (248)
                      |+|.|.|+ |.+|..++..|+..|+  +|++++++....+.....+...........+..   +|.+    .++  +.|+
T Consensus         1 mkI~VIGa-G~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~i~~---~d~~----~~~--~aDv   70 (319)
T 1a5z_A            1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYA---GDYA----DLK--GSDV   70 (319)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEE---CCGG----GGT--TCSE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHhhhhhcCCcEEEe---CCHH----HhC--CCCE
Confidence            46889997 9999999999999999  999998653222221111111110001122221   2332    233  6799


Q ss_pred             EEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCC-EEEEec
Q 025786          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD-TLIYSS  195 (248)
Q Consensus       149 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~-~iV~~S  195 (248)
                      ||-+++.....  .....+....|......+.+.+.+.... .+|.+|
T Consensus        71 Viiav~~~~~~--g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~ii~~t  116 (319)
T 1a5z_A           71 VIVAAGVPQKP--GETRLQLLGRNARVMKEIARNVSKYAPDSIVIVVT  116 (319)
T ss_dssp             EEECCCCCCCS--SCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             EEEccCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeC
Confidence            99998754311  1123344555555566666666654333 444443

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=97.02  E-value=0.0071  Score=51.95  Aligned_cols=34  Identities=24%  Similarity=0.143  Sum_probs=30.6

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSR  105 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~  105 (248)
                      .+|+|.|+ |.+|..+++.+...|++|++.+++..
T Consensus       185 ~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~  218 (381)
T 3p2y_A          185 ASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPE  218 (381)
T ss_dssp             CEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGG
T ss_pred             CEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence            78999997 99999999999999999999987543

>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*

Probab=97.01  E-value=0.0033  Score=53.08  Aligned_cols=113  Identities=15%  Similarity=0.186  Sum_probs=65.1

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC--EEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~  148 (248)
                      ++|.|+|+ |.+|..++..|+..+.  +|+++|+...+.+.....+.+..+....+.+.. |  ++++    ++  +.|+
T Consensus        10 ~KI~IiGa-G~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~-~--~~~a----~~--~aDv   79 (326)
T 2zqz_A           10 QKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIYS-A--EYSD----AK--DADL   79 (326)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEE-C--CGGG----GG--GCSE
T ss_pred             CEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEEE-C--CHHH----hC--CCCE
Confidence            68999998 9999999999998885  899988633222111111111111112333332 2  3333    33  5799


Q ss_pred             EEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCC-CEEEEec
Q 025786          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV-DTLIYSS  195 (248)
Q Consensus       149 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~-~~iV~~S  195 (248)
                      ||..+|.....  ...-.+....|......+.+.+.+..+ ..||++|
T Consensus        80 Vii~ag~~~k~--g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t  125 (326)
T 2zqz_A           80 VVITAGAPQKP--GETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAA  125 (326)
T ss_dssp             EEECCCCC-------CHHHHHHHHHHHHHHHHHHHHHHTCCSEEEECS
T ss_pred             EEEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeC
Confidence            99999864321  223345556666666777777766543 3555554

>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}

Probab=96.95  E-value=0.01  Score=50.06  Aligned_cols=112  Identities=18%  Similarity=0.168  Sum_probs=64.7

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC-EEEEEecCCCCcchhhhhhhhh---cCCCCceEEEEccCCCHHHHHHHhhcCCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQEL---FPEPGRLQFIYADLGDAKAVNKFFSENAF  146 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~~~~Dl~~~~~~~~~~~~~~i  146 (248)
                      ++|.|.|| |.+|..++..|+..|+ +|++.|++....+.....+...   .....++... .   |.+    .++  +.
T Consensus        15 ~kI~ViGa-G~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t-~---d~~----al~--~a   83 (328)
T 2hjr_A           15 KKISIIGA-GQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFGE-N---NYE----YLQ--NS   83 (328)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEE-S---CGG----GGT--TC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEEC-C---CHH----HHC--CC
Confidence            58999997 9999999999999998 9999987543322211111111   0112233321 2   222    233  67


Q ss_pred             CEEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCC-EEEEec
Q 025786          147 DAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD-TLIYSS  195 (248)
Q Consensus       147 D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~-~iV~~S  195 (248)
                      |+||-.+|.... + .....+....|......+.+.+.+..+. .+|++|
T Consensus        84 D~VI~avg~p~k-~-g~tr~dl~~~n~~i~~~i~~~i~~~~p~a~viv~t  131 (328)
T 2hjr_A           84 DVVIITAGVPRK-P-NMTRSDLLTVNAKIVGSVAENVGKYCPNAFVICIT  131 (328)
T ss_dssp             SEEEECCSCCCC-T-TCCSGGGHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             CEEEEcCCCCCC-C-CCchhhHHhhhHHHHHHHHHHHHHHCCCeEEEEec
Confidence            999999986431 1 1122344455665666677777665433 444443

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=96.93  E-value=0.00036  Score=58.82  Aligned_cols=34  Identities=35%  Similarity=0.403  Sum_probs=30.4

Q ss_pred             EEEEecCCchhHHHHHHHHHHCCCEEEEEecCCC
Q 025786           72 HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSR  105 (248)
Q Consensus        72 ~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~  105 (248)
                      +|+|+||+|++|...++.+...|++|++++++..
T Consensus       153 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~  186 (330)
T 1tt7_A          153 SVLVTGATGGVGGIAVSMLNKRGYDVVASTGNRE  186 (330)
T ss_dssp             CEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSS
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence            7999999999999999988889999999886543

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=96.91  E-value=0.0027  Score=51.53  Aligned_cols=78  Identities=24%  Similarity=0.306  Sum_probs=49.8

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC-EEEEEecCC-------C------------CcchhhhhhhhhcCCCCceEEEEcc
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLS-------R------------GNIGAVKVLQELFPEPGRLQFIYAD  130 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~-~V~~~~r~~-------~------------~~~~~~~~~~~~~~~~~~~~~~~~D  130 (248)
                      ++|+|.|+ ||+|.++++.|+..|. +++++|...       +            +.+.+.+.++++.+ ..++..+..+
T Consensus        29 ~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np-~~~v~~~~~~  106 (251)
T 1zud_1           29 SQVLIIGL-GGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNP-DIQLTALQQR  106 (251)
T ss_dssp             CEEEEECC-STTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCT-TSEEEEECSC
T ss_pred             CcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCC-CCEEEEEecc
Confidence            78999995 8899999999999997 788887532       1            11112222333321 2245555555


Q ss_pred             CCCHHHHHHHhhcCCCCEEEEcc
Q 025786          131 LGDAKAVNKFFSENAFDAVMHFA  153 (248)
Q Consensus       131 l~~~~~~~~~~~~~~iD~li~~A  153 (248)
                      ++ .+.+.++++  +.|+||++.
T Consensus       107 ~~-~~~~~~~~~--~~DvVi~~~  126 (251)
T 1zud_1          107 LT-GEALKDAVA--RADVVLDCT  126 (251)
T ss_dssp             CC-HHHHHHHHH--HCSEEEECC
T ss_pred             CC-HHHHHHHHh--cCCEEEECC
Confidence            54 456667776  579999764

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=96.91  E-value=0.0022  Score=56.76  Aligned_cols=72  Identities=15%  Similarity=0.262  Sum_probs=53.8

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li  150 (248)
                      |+|+|.|+ |-+|+++++.|.++|++|+++++++   +...+..+.+     .+..+.+|-++++.++++-- .+.|++|
T Consensus         4 M~iiI~G~-G~vG~~la~~L~~~~~~v~vId~d~---~~~~~~~~~~-----~~~~i~Gd~~~~~~L~~Agi-~~ad~~i   73 (461)
T 4g65_A            4 MKIIILGA-GQVGGTLAENLVGENNDITIVDKDG---DRLRELQDKY-----DLRVVNGHASHPDVLHEAGA-QDADMLV   73 (461)
T ss_dssp             EEEEEECC-SHHHHHHHHHTCSTTEEEEEEESCH---HHHHHHHHHS-----SCEEEESCTTCHHHHHHHTT-TTCSEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCEEEEECCH---HHHHHHHHhc-----CcEEEEEcCCCHHHHHhcCC-CcCCEEE
Confidence            78999985 8999999999999999999998532   2222221222     46789999999998887643 2678888


Q ss_pred             Ec
Q 025786          151 HF  152 (248)
Q Consensus       151 ~~  152 (248)
                      -.
T Consensus        74 a~   75 (461)
T 4g65_A           74 AV   75 (461)
T ss_dssp             EC
T ss_pred             EE
Confidence            54

>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*

Probab=96.90  E-value=0.013  Score=48.98  Aligned_cols=112  Identities=16%  Similarity=0.153  Sum_probs=63.9

Q ss_pred             eEEEEecCCchhHHHHHHHHHHC--CCEEEEEecCCCCcchhhhhhhhh---cCCCCceEEEEccCCCHHHHHHHhhcCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKD--SYRVTIVDNLSRGNIGAVKVLQEL---FPEPGRLQFIYADLGDAKAVNKFFSENA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~~~~Dl~~~~~~~~~~~~~~  145 (248)
                      |+|.|.|+ |.+|..++..|+..  |++|+++|+.....+.....+.+.   .....++.. .   +|.+   + ++  +
T Consensus         1 mkI~VIGa-G~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~-t---~d~~---~-l~--~   69 (310)
T 1guz_A            1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTG-S---NDYA---D-TA--N   69 (310)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEE-E---SCGG---G-GT--T
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEEE-C---CCHH---H-HC--C
Confidence            46889998 99999999999985  789999997543322211111110   001112221 1   2332   2 33  6


Q ss_pred             CCEEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCC-CEEEEec
Q 025786          146 FDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV-DTLIYSS  195 (248)
Q Consensus       146 iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~-~~iV~~S  195 (248)
                      .|+||-+++...  .......+.+..|......+.+.+.+... ..+|.+|
T Consensus        70 aDvViiav~~p~--~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~viv~t  118 (310)
T 1guz_A           70 SDIVIITAGLPR--KPGMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVVS  118 (310)
T ss_dssp             CSEEEECCSCCC--CTTCCHHHHHHHHHHHHHHHHHHHHHHCSSCEEEECC
T ss_pred             CCEEEEeCCCCC--CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEc
Confidence            799999987432  11122344555666666677777766543 3555554

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=96.89  E-value=0.0013  Score=57.50  Aligned_cols=72  Identities=14%  Similarity=0.284  Sum_probs=52.6

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li  150 (248)
                      ++|+|.|. |-+|+.+++.|.++|++|+++++++..    .+.++..     .+.++.+|.++.+.+.++-- .+.|+||
T Consensus         5 ~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~----v~~~~~~-----g~~vi~GDat~~~~L~~agi-~~A~~vi   73 (413)
T 3l9w_A            5 MRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDH----IETLRKF-----GMKVFYGDATRMDLLESAGA-AKAEVLI   73 (413)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHH----HHHHHHT-----TCCCEESCTTCHHHHHHTTT-TTCSEEE
T ss_pred             CeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHH----HHHHHhC-----CCeEEEcCCCCHHHHHhcCC-CccCEEE
Confidence            57999995 899999999999999999999864322    2222221     35668899999988876621 2578887


Q ss_pred             Ecc
Q 025786          151 HFA  153 (248)
Q Consensus       151 ~~A  153 (248)
                      -+.
T Consensus        74 v~~   76 (413)
T 3l9w_A           74 NAI   76 (413)
T ss_dssp             ECC
T ss_pred             ECC
Confidence            654

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=96.89  E-value=0.0051  Score=52.68  Aligned_cols=73  Identities=12%  Similarity=0.108  Sum_probs=47.7

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHH---HHHHHhhcCCCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAK---AVNKFFSENAFD  147 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~---~~~~~~~~~~iD  147 (248)
                      .+|+|+||+|++|...+..+...|++|+++. +..+    .+..+++.   .. .+  .|..+.+   .+.++.. +++|
T Consensus       166 ~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~----~~~~~~lG---a~-~v--i~~~~~~~~~~v~~~t~-g~~d  233 (371)
T 3gqv_A          166 VYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHN----FDLAKSRG---AE-EV--FDYRAPNLAQTIRTYTK-NNLR  233 (371)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGG----HHHHHHTT---CS-EE--EETTSTTHHHHHHHHTT-TCCC
T ss_pred             cEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHH----HHHHHHcC---Cc-EE--EECCCchHHHHHHHHcc-CCcc
Confidence            8999999999999999999999999998875 2221    22334442   11 22  2333322   2333322 4699


Q ss_pred             EEEEcccc
Q 025786          148 AVMHFAAV  155 (248)
Q Consensus       148 ~li~~Ag~  155 (248)
                      ++|.+.|.
T Consensus       234 ~v~d~~g~  241 (371)
T 3gqv_A          234 YALDCITN  241 (371)
T ss_dssp             EEEESSCS
T ss_pred             EEEECCCc
Confidence            99999873

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=96.89  E-value=0.00098  Score=57.06  Aligned_cols=73  Identities=21%  Similarity=0.180  Sum_probs=45.3

Q ss_pred             eEEEEecCCchhHHHHHHHHHH-CCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCC--HHHHHHHhhcCCCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLK-DSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD--AKAVNKFFSENAFD  147 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~-~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~iD  147 (248)
                      .+|+|+||+|++|...+..+.. .|++|++++++..+    .+..+++.   ... +  .|..+  .+.+.+. ...++|
T Consensus       173 ~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~----~~~~~~lG---ad~-v--i~~~~~~~~~v~~~-~~~g~D  241 (363)
T 4dvj_A          173 PAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPET----QEWVKSLG---AHH-V--IDHSKPLAAEVAAL-GLGAPA  241 (363)
T ss_dssp             EEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHH----HHHHHHTT---CSE-E--ECTTSCHHHHHHTT-CSCCEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHH----HHHHHHcC---CCE-E--EeCCCCHHHHHHHh-cCCCce
Confidence            8999999999999988776655 58999998753322    22333332   111 1  23322  1222222 224799


Q ss_pred             EEEEccc
Q 025786          148 AVMHFAA  154 (248)
Q Consensus       148 ~li~~Ag  154 (248)
                      ++|.++|
T Consensus       242 vvid~~g  248 (363)
T 4dvj_A          242 FVFSTTH  248 (363)
T ss_dssp             EEEECSC
T ss_pred             EEEECCC
Confidence            9999987

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=96.87  E-value=0.00072  Score=59.90  Aligned_cols=34  Identities=21%  Similarity=0.185  Sum_probs=30.5

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCC
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~  104 (248)
                      +|+++|||++ +||+.+++.|...|++|+++++++
T Consensus       265 GKtVvVtGaG-gIG~aiA~~Laa~GA~Viv~D~~~  298 (488)
T 3ond_A          265 GKVAVVAGYG-DVGKGCAAALKQAGARVIVTEIDP  298 (488)
T ss_dssp             TCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCH
T ss_pred             CCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCH
Confidence            3999999976 999999999999999999988643

>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A

Probab=96.86  E-value=0.013  Score=48.85  Aligned_cols=109  Identities=14%  Similarity=0.144  Sum_probs=64.5

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCC--EEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCC
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFD  147 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD  147 (248)
                      +++|.|+|| |.+|..++..|+.+|.  +|++.|..........+.. .+.  ..++.. ..   |+++    ++  +.|
T Consensus        14 ~~kV~ViGa-G~vG~~~a~~l~~~g~~~ev~L~Di~~~~~g~a~dl~-~~~--~~~i~~-t~---d~~~----l~--~aD   79 (303)
T 2i6t_A           14 VNKITVVGG-GELGIACTLAISAKGIADRLVLLDLSEGTKGATMDLE-IFN--LPNVEI-SK---DLSA----SA--HSK   79 (303)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECCC-----CHHHHH-HHT--CTTEEE-ES---CGGG----GT--TCS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEcCCcchHHHHHHHh-hhc--CCCeEE-eC---CHHH----HC--CCC
Confidence            478999995 8999999999999998  9999997543111222222 221  124443 22   3322    33  689


Q ss_pred             EEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCC-EEEEec
Q 025786          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD-TLIYSS  195 (248)
Q Consensus       148 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~-~iV~~S  195 (248)
                      +||..+|...  + ...-.+....|......+.+.+.+..+. .++++|
T Consensus        80 ~Vi~aag~~~--p-G~tR~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~s  125 (303)
T 2i6t_A           80 VVIFTVNSLG--S-SQSYLDVVQSNVDMFRALVPALGHYSQHSVLLVAS  125 (303)
T ss_dssp             EEEECCCC-------CCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEECS
T ss_pred             EEEEcCCCCC--C-CCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcC
Confidence            9999998742  2 2233455566666666677777665433 444444

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=96.85  E-value=0.0014  Score=55.44  Aligned_cols=72  Identities=17%  Similarity=0.244  Sum_probs=46.5

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC-EEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCH---HHHHHHhhcCCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDA---KAVNKFFSENAF  146 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~---~~~~~~~~~~~i  146 (248)
                      .+|+|+|+ |++|..+++.+...|+ +|++++++..+.    +..+++ .   . .  ..|..+.   +.+.++. ..++
T Consensus       166 ~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~----~~~~~l-a---~-~--v~~~~~~~~~~~~~~~~-~~g~  232 (343)
T 2dq4_A          166 KSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRL----AFARPY-A---D-R--LVNPLEEDLLEVVRRVT-GSGV  232 (343)
T ss_dssp             SCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHH----GGGTTT-C---S-E--EECTTTSCHHHHHHHHH-SSCE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHH----HHHHHh-H---H-h--ccCcCccCHHHHHHHhc-CCCC
Confidence            78999999 9999999998888999 899988543221    111221 1   1 1  1344332   2333333 3469


Q ss_pred             CEEEEcccc
Q 025786          147 DAVMHFAAV  155 (248)
Q Consensus       147 D~li~~Ag~  155 (248)
                      |++|+++|.
T Consensus       233 D~vid~~g~  241 (343)
T 2dq4_A          233 EVLLEFSGN  241 (343)
T ss_dssp             EEEEECSCC
T ss_pred             CEEEECCCC
Confidence            999999873

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=96.85  E-value=0.00091  Score=57.60  Aligned_cols=75  Identities=11%  Similarity=0.083  Sum_probs=48.7

Q ss_pred             eEEEEec-CCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCH---HHHHHHhhcCCC
Q 025786           71 THVLVTG-GAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDA---KAVNKFFSENAF  146 (248)
Q Consensus        71 k~vlITG-asg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~---~~~~~~~~~~~i  146 (248)
                      .+|+|.| |+|++|...+..+...|++|++++++..+    .+..+++.   ... ++  |..+.   +.+.++....++
T Consensus       172 ~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~----~~~~~~lG---a~~-~~--~~~~~~~~~~v~~~t~~~g~  241 (379)
T 3iup_A          172 HSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQ----ADLLKAQG---AVH-VC--NAASPTFMQDLTEALVSTGA  241 (379)
T ss_dssp             CSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHHH----HHHHHHTT---CSC-EE--ETTSTTHHHHHHHHHHHHCC
T ss_pred             CEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHH----HHHHHhCC---CcE-EE--eCCChHHHHHHHHHhcCCCc
Confidence            6799987 99999999998888889999998854322    22333332   111 22  33332   334444333479


Q ss_pred             CEEEEcccc
Q 025786          147 DAVMHFAAV  155 (248)
Q Consensus       147 D~li~~Ag~  155 (248)
                      |++|.+.|.
T Consensus       242 d~v~d~~g~  250 (379)
T 3iup_A          242 TIAFDATGG  250 (379)
T ss_dssp             CEEEESCEE
T ss_pred             eEEEECCCc
Confidence            999999984

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=96.84  E-value=0.0023  Score=55.51  Aligned_cols=74  Identities=20%  Similarity=0.224  Sum_probs=47.4

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC-EEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCH---HHHHHHhhcCCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDA---KAVNKFFSENAF  146 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~---~~~~~~~~~~~i  146 (248)
                      .+|+|+|+ |++|...+..+...|+ +|++++++..+    .+..+++.   .. .+  .|..+.   +.+.++....++
T Consensus       215 ~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~----~~~~~~lG---a~-~v--i~~~~~~~~~~i~~~t~g~g~  283 (404)
T 3ip1_A          215 DNVVILGG-GPIGLAAVAILKHAGASKVILSEPSEVR----RNLAKELG---AD-HV--IDPTKENFVEAVLDYTNGLGA  283 (404)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHH----HHHHHHHT---CS-EE--ECTTTSCHHHHHHHHTTTCCC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHH----HHHHHHcC---CC-EE--EcCCCCCHHHHHHHHhCCCCC
Confidence            89999998 9999999988888999 88888753322    23334442   11 12  233332   233333332469


Q ss_pred             CEEEEcccc
Q 025786          147 DAVMHFAAV  155 (248)
Q Consensus       147 D~li~~Ag~  155 (248)
                      |++|.++|.
T Consensus       284 D~vid~~g~  292 (404)
T 3ip1_A          284 KLFLEATGV  292 (404)
T ss_dssp             SEEEECSSC
T ss_pred             CEEEECCCC
Confidence            999999873

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=96.84  E-value=0.016  Score=50.13  Aligned_cols=34  Identities=21%  Similarity=0.222  Sum_probs=30.6

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSR  105 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~  105 (248)
                      .+|+|.|+ |-+|..+++.+...|++|++.|++..
T Consensus       191 ~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~  224 (405)
T 4dio_A          191 AKIFVMGA-GVAGLQAIATARRLGAVVSATDVRPA  224 (405)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSTT
T ss_pred             CEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence            78999997 99999999999999999999987543

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=96.83  E-value=0.0023  Score=52.43  Aligned_cols=37  Identities=27%  Similarity=0.359  Sum_probs=32.2

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcc
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNI  108 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~  108 (248)
                      ++++|.|+ ||.|++++..|++.|.+|++++|+..+.+
T Consensus       119 k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~  155 (269)
T 3phh_A          119 QNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLD  155 (269)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence            89999996 99999999999999999999987654433

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=96.83  E-value=0.0012  Score=55.36  Aligned_cols=71  Identities=21%  Similarity=0.261  Sum_probs=45.3

Q ss_pred             EEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEEEc
Q 025786           73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVMHF  152 (248)
Q Consensus        73 vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li~~  152 (248)
                      |+|+||+|++|...+..+...|++|++++++..+.    +..+++.   ....+   |..+.+.+++ +..+++|++|.+
T Consensus       150 VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~----~~~~~lG---a~~vi---~~~~~~~~~~-~~~~~~d~v~d~  218 (324)
T 3nx4_A          150 VVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTH----GYLKSLG---ANRIL---SRDEFAESRP-LEKQLWAGAIDT  218 (324)
T ss_dssp             EEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGH----HHHHHHT---CSEEE---EGGGSSCCCS-SCCCCEEEEEES
T ss_pred             EEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHH----HHHHhcC---CCEEE---ecCCHHHHHh-hcCCCccEEEEC
Confidence            99999999999999999999999999998654332    2333332   12211   2222111111 122468999998


Q ss_pred             cc
Q 025786          153 AA  154 (248)
Q Consensus       153 Ag  154 (248)
                      +|
T Consensus       219 ~g  220 (324)
T 3nx4_A          219 VG  220 (324)
T ss_dssp             SC
T ss_pred             CC
Confidence            76

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=96.83  E-value=0.0016  Score=55.53  Aligned_cols=74  Identities=20%  Similarity=0.196  Sum_probs=47.7

Q ss_pred             eEEEEecCCchhHHHHHHHHHHC-CCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCH--HHHHHHhhcCCCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKD-SYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDA--KAVNKFFSENAFD  147 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~--~~~~~~~~~~~iD  147 (248)
                      .+|+|+|+ |++|...+..+... |++|++++++..+    .+..+++.   .. .+  .|..+.  +.+.++....++|
T Consensus       188 ~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~~~~~----~~~~~~lG---a~-~v--i~~~~~~~~~v~~~~~g~g~D  256 (359)
T 1h2b_A          188 AYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEK----LKLAERLG---AD-HV--VDARRDPVKQVMELTRGRGVN  256 (359)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHH----HHHHHHTT---CS-EE--EETTSCHHHHHHHHTTTCCEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHH----HHHHHHhC---CC-EE--EeccchHHHHHHHHhCCCCCc
Confidence            89999999 89999999888888 9999998854322    22233332   11 12  244433  3333333222699


Q ss_pred             EEEEcccc
Q 025786          148 AVMHFAAV  155 (248)
Q Consensus       148 ~li~~Ag~  155 (248)
                      ++|.++|.
T Consensus       257 vvid~~G~  264 (359)
T 1h2b_A          257 VAMDFVGS  264 (359)
T ss_dssp             EEEESSCC
T ss_pred             EEEECCCC
Confidence            99999874

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=96.82  E-value=0.0024  Score=54.76  Aligned_cols=72  Identities=15%  Similarity=0.143  Sum_probs=49.0

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li  150 (248)
                      .+|+|+|+ |++|...++.+...|++|++++++..+.    +..+++.   .. .  ..|..+.+.++++.  .++|++|
T Consensus       196 ~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~----~~a~~lG---a~-~--vi~~~~~~~~~~~~--~g~Dvvi  262 (369)
T 1uuf_A          196 KKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKR----EAAKALG---AD-E--VVNSRNADEMAAHL--KSFDFIL  262 (369)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGH----HHHHHHT---CS-E--EEETTCHHHHHTTT--TCEEEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHH----HHHHHcC---Cc-E--EeccccHHHHHHhh--cCCCEEE
Confidence            78999997 8999999988888999999988644332    2223332   11 1  23555555444433  4799999


Q ss_pred             Ecccc
Q 025786          151 HFAAV  155 (248)
Q Consensus       151 ~~Ag~  155 (248)
                      +++|.
T Consensus       263 d~~g~  267 (369)
T 1uuf_A          263 NTVAA  267 (369)
T ss_dssp             ECCSS
T ss_pred             ECCCC
Confidence            99874

>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*

Probab=96.80  E-value=0.029  Score=48.11  Aligned_cols=118  Identities=14%  Similarity=0.079  Sum_probs=68.8

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC--E---EEEEecCCCCc-chhhhhhhhhcCCC-CceEEEEccCCCHHHHHHHhhc
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY--R---VTIVDNLSRGN-IGAVKVLQELFPEP-GRLQFIYADLGDAKAVNKFFSE  143 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~--~---V~~~~r~~~~~-~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~  143 (248)
                      .+|.||||+|.||.+++-.|+..+.  +   |.+.+...... +.+.....++.... .-..-+.  +.+  .-.+.++ 
T Consensus        33 ~KV~ViGAaG~VG~~la~~l~~~~l~~e~~~l~L~d~d~~~~~~~~~G~amDL~h~~~p~~~~v~--i~~--~~y~~~~-  107 (375)
T 7mdh_A           33 VNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVS--IGI--DPYEVFE-  107 (375)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEE--EES--CHHHHTT-
T ss_pred             CEEEEECCCChHHHHHHHHHHcCCcCCCCceeEEEecCccchhhhhHHHHHhHHhhhhhhcCCcE--Eec--CCHHHhC-
Confidence            7899999999999999999998864  2   66654322221 11222222222111 1111111  111  1123333 


Q ss_pred             CCCCEEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHc-C-CCEEEEecc
Q 025786          144 NAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARH-G-VDTLIYSST  196 (248)
Q Consensus       144 ~~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~-~-~~~iV~~SS  196 (248)
                       +.|++|-.||...  ....+-.+.+..|......+.+.+.+. . ...|+.+|.
T Consensus       108 -daDvVVitag~pr--kpG~tR~DLl~~N~~I~k~i~~~i~~~a~p~~ivlVvsN  159 (375)
T 7mdh_A          108 -DVDWALLIGAKPR--GPGMERAALLDINGQIFADQGKALNAVASKNVKVLVVGN  159 (375)
T ss_dssp             -TCSEEEECCCCCC--CTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred             -CCCEEEEcCCCCC--CCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecC
Confidence             6799999998642  223455677788888888888888774 3 345665654

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=96.80  E-value=0.0013  Score=56.16  Aligned_cols=73  Identities=16%  Similarity=0.137  Sum_probs=47.7

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li  150 (248)
                      ++|+|+|+ |++|..+++.+...|++|++++++..+.+    ..+++.   .. .+  .|..+.+++.+.+. +++|++|
T Consensus       181 ~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~----~~~~lG---a~-~v--~~~~~~~~~~~~~~-~~~D~vi  248 (360)
T 1piw_A          181 KKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKRE----DAMKMG---AD-HY--IATLEEGDWGEKYF-DTFDLIV  248 (360)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHH----HHHHHT---CS-EE--EEGGGTSCHHHHSC-SCEEEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHH----HHHHcC---CC-EE--EcCcCchHHHHHhh-cCCCEEE
Confidence            89999999 99999999888889999999986544332    223332   11 12  23333202222222 4799999


Q ss_pred             Ecccc
Q 025786          151 HFAAV  155 (248)
Q Consensus       151 ~~Ag~  155 (248)
                      +++|.
T Consensus       249 d~~g~  253 (360)
T 1piw_A          249 VCASS  253 (360)
T ss_dssp             ECCSC
T ss_pred             ECCCC
Confidence            99885

>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*

Probab=96.80  E-value=0.0098  Score=49.68  Aligned_cols=107  Identities=14%  Similarity=0.071  Sum_probs=59.5

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCC--EEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCC
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFD  147 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD  147 (248)
                      +++|.|.|+ |.+|..++..|+..|+  +|++++++....+.....+...........+...  ++.+.    ++  +.|
T Consensus         7 ~mkI~IiGa-G~vG~~~a~~l~~~g~~~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~----~~--~aD   77 (319)
T 1lld_A            7 PTKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGS--DDPEI----CR--DAD   77 (319)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEE--SCGGG----GT--TCS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHhhhhhcCCeEEEeC--CCHHH----hC--CCC
Confidence            368999997 9999999999999998  9999986432211000001111000011222111  12222    22  689


Q ss_pred             EEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcC
Q 025786          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHG  187 (248)
Q Consensus       148 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~  187 (248)
                      +||-+++....  ......+....|......+++.+.+..
T Consensus        78 ~Vii~v~~~~~--~g~~r~~~~~~n~~~~~~~~~~i~~~~  115 (319)
T 1lld_A           78 MVVITAGPRQK--PGQSRLELVGATVNILKAIMPNLVKVA  115 (319)
T ss_dssp             EEEECCCCCCC--TTCCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             EEEECCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHhC
Confidence            99999875322  122334445555555556666665543

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=96.78  E-value=0.0033  Score=54.06  Aligned_cols=74  Identities=14%  Similarity=0.174  Sum_probs=47.5

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCC-CEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCC--CHHHHHHHhhc----
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDS-YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG--DAKAVNKFFSE----  143 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~--~~~~~~~~~~~----  143 (248)
                      ++|+|+| +|++|...++.+...| ++|++++++..+    .+..+++.   .. .++  |..  +.+++.+.+.+    
T Consensus       197 ~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~----~~~~~~lG---a~-~vi--~~~~~~~~~~~~~v~~~~~g  265 (380)
T 1vj0_A          197 KTVVIQG-AGPLGLFGVVIARSLGAENVIVIAGSPNR----LKLAEEIG---AD-LTL--NRRETSVEERRKAIMDITHG  265 (380)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEESCHHH----HHHHHHTT---CS-EEE--ETTTSCHHHHHHHHHHHTTT
T ss_pred             CEEEEEC-cCHHHHHHHHHHHHcCCceEEEEcCCHHH----HHHHHHcC---Cc-EEE--eccccCcchHHHHHHHHhCC
Confidence            8999999 8999999999888899 599999854322    22233332   11 222  333  13343333322    


Q ss_pred             CCCCEEEEcccc
Q 025786          144 NAFDAVMHFAAV  155 (248)
Q Consensus       144 ~~iD~li~~Ag~  155 (248)
                      .++|++|+++|.
T Consensus       266 ~g~Dvvid~~g~  277 (380)
T 1vj0_A          266 RGADFILEATGD  277 (380)
T ss_dssp             SCEEEEEECSSC
T ss_pred             CCCcEEEECCCC
Confidence            269999999873

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=96.77  E-value=0.0013  Score=56.18  Aligned_cols=78  Identities=12%  Similarity=0.045  Sum_probs=46.9

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCH--HHHHHHhhc-CCCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDA--KAVNKFFSE-NAFD  147 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~--~~~~~~~~~-~~iD  147 (248)
                      .+|||+||+|++|...+..+...|++|+++.+...+.++..+..+++.   ... ++  |..+.  +.+.++... +++|
T Consensus       169 ~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lG---a~~-vi--~~~~~~~~~~~~~~~~~~~~D  242 (357)
T 1zsy_A          169 DSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLG---AEH-VI--TEEELRRPEMKNFFKDMPQPR  242 (357)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHHHTT---CSE-EE--EHHHHHSGGGGGTTSSSCCCS
T ss_pred             CEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHHHhcC---CcE-EE--ecCcchHHHHHHHHhCCCCce
Confidence            899999999999999988888889998887643322222223334432   111 22  21111  123232222 2589


Q ss_pred             EEEEccc
Q 025786          148 AVMHFAA  154 (248)
Q Consensus       148 ~li~~Ag  154 (248)
                      ++|.+.|
T Consensus       243 vvid~~g  249 (357)
T 1zsy_A          243 LALNCVG  249 (357)
T ss_dssp             EEEESSC
T ss_pred             EEEECCC
Confidence            9999987

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=96.76  E-value=0.001  Score=56.41  Aligned_cols=74  Identities=14%  Similarity=0.111  Sum_probs=47.2

Q ss_pred             eEEEEecCCchhHHHHHHHHHHC--CCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCC-HHHHHHHhhcCCCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKD--SYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD-AKAVNKFFSENAFD  147 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~iD  147 (248)
                      .+|+|+|+ |+||...++.+...  |++|++++++..+    .+..+++.   .. .+  .|..+ .+.+.++....++|
T Consensus       172 ~~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~~~~----~~~~~~lG---a~-~v--i~~~~~~~~~~~~~~g~g~D  240 (344)
T 2h6e_A          172 PVVIVNGI-GGLAVYTIQILKALMKNITIVGISRSKKH----RDFALELG---AD-YV--SEMKDAESLINKLTDGLGAS  240 (344)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHCTTCEEEEECSCHHH----HHHHHHHT---CS-EE--ECHHHHHHHHHHHHTTCCEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHhcCCCEEEEEeCCHHH----HHHHHHhC---CC-EE--eccccchHHHHHhhcCCCcc
Confidence            89999999 99999999888888  9999998753322    22333332   11 11  23333 33333333223699


Q ss_pred             EEEEcccc
Q 025786          148 AVMHFAAV  155 (248)
Q Consensus       148 ~li~~Ag~  155 (248)
                      ++|+++|.
T Consensus       241 ~vid~~g~  248 (344)
T 2h6e_A          241 IAIDLVGT  248 (344)
T ss_dssp             EEEESSCC
T ss_pred             EEEECCCC
Confidence            99999873

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=96.76  E-value=0.0021  Score=54.60  Aligned_cols=67  Identities=19%  Similarity=0.114  Sum_probs=45.6

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li  150 (248)
                      .+|+|+|+ |+||...+..+...|++|++++++..+.+    ..+++.   .... +    .+.+.+    ++ ++|++|
T Consensus       178 ~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~----~~~~lG---a~~v-~----~~~~~~----~~-~~D~vi  239 (348)
T 3two_A          178 TKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQ----DALSMG---VKHF-Y----TDPKQC----KE-ELDFII  239 (348)
T ss_dssp             CEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTTHH----HHHHTT---CSEE-E----SSGGGC----CS-CEEEEE
T ss_pred             CEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHH----HHHhcC---CCee-c----CCHHHH----hc-CCCEEE
Confidence            89999997 99999999988889999999886544332    233332   2222 2    333332    22 689999


Q ss_pred             Ecccc
Q 025786          151 HFAAV  155 (248)
Q Consensus       151 ~~Ag~  155 (248)
                      +++|.
T Consensus       240 d~~g~  244 (348)
T 3two_A          240 STIPT  244 (348)
T ss_dssp             ECCCS
T ss_pred             ECCCc
Confidence            99874

>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A

Probab=96.76  E-value=0.022  Score=47.63  Aligned_cols=113  Identities=19%  Similarity=0.119  Sum_probs=63.6

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC-EEEEEecCCCCcchhhhhhhhh---cCCCCceEEEEccCCCHHHHHHHhhcCCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQEL---FPEPGRLQFIYADLGDAKAVNKFFSENAF  146 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~~~~Dl~~~~~~~~~~~~~~i  146 (248)
                      ++|.|.|+ |.+|..++..|+..|+ +|++.|++....+.....+...   .....++... .   |.+    .++  +.
T Consensus         5 ~kI~VIGa-G~~G~~ia~~la~~g~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t-~---d~~----a~~--~a   73 (317)
T 2ewd_A            5 RKIAVIGS-GQIGGNIAYIVGKDNLADVVLFDIAEGIPQGKALDITHSMVMFGSTSKVIGT-D---DYA----DIS--GS   73 (317)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEE-S---CGG----GGT--TC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCchHHHHHHHHHHhhhhhcCCCcEEEEC-C---CHH----HhC--CC
Confidence            68999997 9999999999999998 9999987543222211111110   0111222221 2   222    233  67


Q ss_pred             CEEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCC-EEEEecc
Q 025786          147 DAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD-TLIYSST  196 (248)
Q Consensus       147 D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~-~iV~~SS  196 (248)
                      |+||-++|.....  .....+....+......+++.+.+.... .+|++|.
T Consensus        74 DiVi~avg~p~~~--g~~r~d~~~~~~~i~~~i~~~i~~~~~~~iii~~sN  122 (317)
T 2ewd_A           74 DVVIITASIPGRP--KDDRSELLFGNARILDSVAEGVKKYCPNAFVICITN  122 (317)
T ss_dssp             SEEEECCCCSSCC--SSCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECCS
T ss_pred             CEEEEeCCCCCCC--CCcHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEeCC
Confidence            9999999864322  1222334444555555666666654333 4544443

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=96.75  E-value=0.0032  Score=52.79  Aligned_cols=72  Identities=19%  Similarity=0.174  Sum_probs=48.5

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li  150 (248)
                      .+|+|+||+|++|...+..+...|++|+++++.    ++ .+..+++..   . ..  .|..+.+.+.+.+  .++|++|
T Consensus       154 ~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~----~~-~~~~~~lGa---~-~~--i~~~~~~~~~~~~--~g~D~v~  220 (321)
T 3tqh_A          154 DVVLIHAGAGGVGHLAIQLAKQKGTTVITTASK----RN-HAFLKALGA---E-QC--INYHEEDFLLAIS--TPVDAVI  220 (321)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCEEEEEECH----HH-HHHHHHHTC---S-EE--EETTTSCHHHHCC--SCEEEEE
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHcCCEEEEEecc----ch-HHHHHHcCC---C-EE--EeCCCcchhhhhc--cCCCEEE
Confidence            899999999999999999999999999987632    11 233344421   1 12  3444433243333  3789999


Q ss_pred             Ecccc
Q 025786          151 HFAAV  155 (248)
Q Consensus       151 ~~Ag~  155 (248)
                      ++.|.
T Consensus       221 d~~g~  225 (321)
T 3tqh_A          221 DLVGG  225 (321)
T ss_dssp             ESSCH
T ss_pred             ECCCc
Confidence            99873

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=96.72  E-value=0.0028  Score=53.54  Aligned_cols=73  Identities=18%  Similarity=0.135  Sum_probs=46.2

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhh-cCCCCEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFS-ENAFDAV  149 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-~~~iD~l  149 (248)
                      ++|+|+|+ |++|...++.+...|++|++++++..+    .+..+++.   ... .  .|..+.+..+.+.+ .+++|++
T Consensus       168 ~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~----~~~~~~lG---a~~-~--i~~~~~~~~~~~~~~~g~~d~v  236 (340)
T 3s2e_A          168 QWVVISGI-GGLGHVAVQYARAMGLRVAAVDIDDAK----LNLARRLG---AEV-A--VNARDTDPAAWLQKEIGGAHGV  236 (340)
T ss_dssp             SEEEEECC-STTHHHHHHHHHHTTCEEEEEESCHHH----HHHHHHTT---CSE-E--EETTTSCHHHHHHHHHSSEEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCCHHH----HHHHHHcC---CCE-E--EeCCCcCHHHHHHHhCCCCCEE
Confidence            89999996 899999999888999999998854322    22333332   122 2  23333222222221 2478999


Q ss_pred             EEccc
Q 025786          150 MHFAA  154 (248)
Q Consensus       150 i~~Ag  154 (248)
                      |.++|
T Consensus       237 id~~g  241 (340)
T 3s2e_A          237 LVTAV  241 (340)
T ss_dssp             EESSC
T ss_pred             EEeCC
Confidence            99876

>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A

Probab=96.71  E-value=0.0046  Score=52.70  Aligned_cols=32  Identities=31%  Similarity=0.478  Sum_probs=27.6

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCC-----C-EEEEEe
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDS-----Y-RVTIVD  101 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G-----~-~V~~~~  101 (248)
                      |++|.|.||||.+|+.+++.|.+++     . +|+.+.
T Consensus         9 m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~   46 (352)
T 2nqt_A            9 ATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALT   46 (352)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEE
Confidence            4789999999999999999999987     4 666664

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=96.68  E-value=0.0017  Score=53.72  Aligned_cols=33  Identities=15%  Similarity=0.110  Sum_probs=29.8

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC-EEEEEecCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLS  104 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~-~V~~~~r~~  104 (248)
                      ++++|.|+ ||.|++++..|.+.|+ +|+++.|+.
T Consensus       123 k~vlvlGa-GGaaraia~~L~~~G~~~v~v~nRt~  156 (282)
T 3fbt_A          123 NICVVLGS-GGAARAVLQYLKDNFAKDIYVVTRNP  156 (282)
T ss_dssp             SEEEEECS-STTHHHHHHHHHHTTCSEEEEEESCH
T ss_pred             CEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence            89999996 8999999999999998 899988654

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=96.67  E-value=0.0013  Score=57.22  Aligned_cols=70  Identities=21%  Similarity=0.261  Sum_probs=47.3

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCC-EEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~  148 (248)
                      +++|+|.|+ |++|+.+++.|...|+ +|++++|+..+   ..+..+++.     ...  .+.   +++.+.+.  +.|+
T Consensus       167 g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~r---a~~la~~~g-----~~~--~~~---~~l~~~l~--~aDv  230 (404)
T 1gpj_A          167 DKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYER---AVELARDLG-----GEA--VRF---DELVDHLA--RSDV  230 (404)
T ss_dssp             TCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHH---HHHHHHHHT-----CEE--CCG---GGHHHHHH--TCSE
T ss_pred             CCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHH---HHHHHHHcC-----Cce--ecH---HhHHHHhc--CCCE
Confidence            389999997 9999999999999998 89998864322   222222321     121  222   34555554  6899


Q ss_pred             EEEcccc
Q 025786          149 VMHFAAV  155 (248)
Q Consensus       149 li~~Ag~  155 (248)
                      ||++.+.
T Consensus       231 Vi~at~~  237 (404)
T 1gpj_A          231 VVSATAA  237 (404)
T ss_dssp             EEECCSS
T ss_pred             EEEccCC
Confidence            9998753

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=96.66  E-value=0.0061  Score=52.18  Aligned_cols=73  Identities=16%  Similarity=0.167  Sum_probs=46.7

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC-EEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCC----H-HHHHHHhhcC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD----A-KAVNKFFSEN  144 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~----~-~~~~~~~~~~  144 (248)
                      ++|+|+|+ |++|...+..+...|+ +|++++++..+.    +..+++.   .. ..  .|..+    . +.+.++.. +
T Consensus       194 ~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~----~~~~~lG---a~-~v--i~~~~~~~~~~~~~~~~~~-~  261 (374)
T 1cdo_A          194 STCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKF----EKAKVFG---AT-DF--VNPNDHSEPISQVLSKMTN-G  261 (374)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGH----HHHHHTT---CC-EE--ECGGGCSSCHHHHHHHHHT-S
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHH----HHHHHhC---Cc-eE--EeccccchhHHHHHHHHhC-C
Confidence            79999995 9999999998888999 798887543322    2233332   11 11  24332    1 22333333 4


Q ss_pred             CCCEEEEcccc
Q 025786          145 AFDAVMHFAAV  155 (248)
Q Consensus       145 ~iD~li~~Ag~  155 (248)
                      ++|++|+++|.
T Consensus       262 g~D~vid~~g~  272 (374)
T 1cdo_A          262 GVDFSLECVGN  272 (374)
T ss_dssp             CBSEEEECSCC
T ss_pred             CCCEEEECCCC
Confidence            79999999873

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=96.64  E-value=0.0045  Score=52.70  Aligned_cols=73  Identities=16%  Similarity=0.152  Sum_probs=48.2

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li  150 (248)
                      .+|+|+|+ |+||...+..+...|++|++++++..+.   ....+++.   ... +  .|..+.+.+.++.  +++|++|
T Consensus       182 ~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~---~~~~~~lG---a~~-v--i~~~~~~~~~~~~--~g~D~vi  249 (357)
T 2cf5_A          182 LRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSNKKR---EEALQDLG---ADD-Y--VIGSDQAKMSELA--DSLDYVI  249 (357)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSTTHH---HHHHTTSC---CSC-E--EETTCHHHHHHST--TTEEEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCChHHH---HHHHHHcC---Cce-e--eccccHHHHHHhc--CCCCEEE
Confidence            79999995 9999999988888899999988643221   11111221   111 1  3445555555443  3699999


Q ss_pred             Ecccc
Q 025786          151 HFAAV  155 (248)
Q Consensus       151 ~~Ag~  155 (248)
                      +++|.
T Consensus       250 d~~g~  254 (357)
T 2cf5_A          250 DTVPV  254 (357)
T ss_dssp             ECCCS
T ss_pred             ECCCC
Confidence            99884

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=96.60  E-value=0.0041  Score=53.82  Aligned_cols=73  Identities=21%  Similarity=0.304  Sum_probs=47.8

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC-EEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCC----HHHHHHHhhcCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD----AKAVNKFFSENA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~----~~~~~~~~~~~~  145 (248)
                      .+|+|+|+ |+||...+..+...|+ +|++++++..+    .+..+++   +  +..+  |..+    .+.+.++....+
T Consensus       187 ~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~----~~~a~~l---G--a~~i--~~~~~~~~~~~~~~~~~g~g  254 (398)
T 2dph_A          187 SHVYIAGA-GPVGRCAAAGARLLGAACVIVGDQNPER----LKLLSDA---G--FETI--DLRNSAPLRDQIDQILGKPE  254 (398)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEEESCHHH----HHHHHTT---T--CEEE--ETTSSSCHHHHHHHHHSSSC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHH----HHHHHHc---C--CcEE--cCCCcchHHHHHHHHhCCCC
Confidence            89999996 9999999888888899 89998854322    1223333   2  2333  4333    334444433236


Q ss_pred             CCEEEEcccc
Q 025786          146 FDAVMHFAAV  155 (248)
Q Consensus       146 iD~li~~Ag~  155 (248)
                      +|++|.++|.
T Consensus       255 ~Dvvid~~g~  264 (398)
T 2dph_A          255 VDCGVDAVGF  264 (398)
T ss_dssp             EEEEEECSCT
T ss_pred             CCEEEECCCC
Confidence            9999999884

>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1

Probab=96.60  E-value=0.012  Score=49.00  Aligned_cols=115  Identities=14%  Similarity=0.113  Sum_probs=62.3

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCC--CEEEEEecCCCCcchhhhhhhhhc-CCCCceEEEEccCCCHHHHHHHhhcCCC
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDS--YRVTIVDNLSRGNIGAVKVLQELF-PEPGRLQFIYADLGDAKAVNKFFSENAF  146 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G--~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~~i  146 (248)
                      |++|.|.| +|.+|..++..|++.|  ++|++++++....+.....+.... ..+..+.....   |.+    .++  +.
T Consensus         1 m~kI~VIG-aG~~G~~la~~L~~~g~~~~V~l~d~~~~~~~~~~~~l~~~~~~~~~~~~~~~~---d~~----~~~--~a   70 (309)
T 1hyh_A            1 ARKIGIIG-LGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVIN---DWA----ALA--DA   70 (309)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEES---CGG----GGT--TC
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhCCCCCEEEEEcCCHHHHHHHHHHHHhhhhhcCCCeEEEeC---CHH----HhC--CC
Confidence            46899999 7999999999999999  799999875332222221111110 00112332222   322    233  67


Q ss_pred             CEEEEccccccc-CC-CCCCchhhHhhhHHHHHHHHHHHHHcCC-CEEEEe
Q 025786          147 DAVMHFAAVAYV-GE-STLDPLKYYHNITSNTLVVLESMARHGV-DTLIYS  194 (248)
Q Consensus       147 D~li~~Ag~~~~-~~-~~~~~~~~~~~~~~~~~~ll~~~~~~~~-~~iV~~  194 (248)
                      |+||-+++.... .. ......+....|......+++.+.+... ..||++
T Consensus        71 DvViiav~~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~~~~~ii~~  121 (309)
T 1hyh_A           71 DVVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGFHGVLVVI  121 (309)
T ss_dssp             SEEEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTTCCSEEEEC
T ss_pred             CEEEEecCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEE
Confidence            999998875431 00 0112223445555555666666665433 344443

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=96.59  E-value=0.0035  Score=53.79  Aligned_cols=73  Identities=14%  Similarity=0.102  Sum_probs=47.1

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC-EEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCC----C-HHHHHHHhhcC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG----D-AKAVNKFFSEN  144 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~----~-~~~~~~~~~~~  144 (248)
                      .+|+|+|+ |+||...+..+...|+ +|++++++..+.    +..+++.   ... +  .|..    + .+.+.++.. +
T Consensus       195 ~~VlV~Ga-G~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~----~~a~~lG---a~~-v--i~~~~~~~~~~~~i~~~~~-g  262 (378)
T 3uko_A          195 SNVAIFGL-GTVGLAVAEGAKTAGASRIIGIDIDSKKY----ETAKKFG---VNE-F--VNPKDHDKPIQEVIVDLTD-G  262 (378)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHHTCSCEEEECSCTTHH----HHHHTTT---CCE-E--ECGGGCSSCHHHHHHHHTT-S
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHH----HHHHHcC---CcE-E--EccccCchhHHHHHHHhcC-C
Confidence            78999998 9999999988888899 799987544332    2233332   111 2  2332    1 223333333 4


Q ss_pred             CCCEEEEcccc
Q 025786          145 AFDAVMHFAAV  155 (248)
Q Consensus       145 ~iD~li~~Ag~  155 (248)
                      ++|++|.++|.
T Consensus       263 g~D~vid~~g~  273 (378)
T 3uko_A          263 GVDYSFECIGN  273 (378)
T ss_dssp             CBSEEEECSCC
T ss_pred             CCCEEEECCCC
Confidence            79999999873

>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*

Probab=96.58  E-value=0.007  Score=51.18  Aligned_cols=32  Identities=38%  Similarity=0.498  Sum_probs=28.3

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC-EEEEEecC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNL  103 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~-~V~~~~r~  103 (248)
                      ++|+|.| .||+|.++++.|+..|. +++++|+.
T Consensus        35 ~~VlIvG-aGGlGs~va~~La~aGVg~ItlvD~D   67 (340)
T 3rui_A           35 TKVLLLG-AGTLGCYVSRALIAWGVRKITFVDNG   67 (340)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHcCCCEEEEecCC
Confidence            7899998 59999999999999997 78888753

>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}

Probab=96.58  E-value=0.021  Score=47.66  Aligned_cols=114  Identities=11%  Similarity=0.127  Sum_probs=66.9

Q ss_pred             EEEEecCCchhHHHHHHHHHHCCC-EEEEEecCCCCcchhhhhhhhhc-CCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 025786           72 HVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELF-PEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (248)
Q Consensus        72 ~vlITGasg~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~l  149 (248)
                      +|.|+|| |.+|..++..|+..|. +|++.|+...+.+.....+.+.. .......+...  +|++    .++  +.|+|
T Consensus         1 KI~IiGa-G~vG~~~a~~l~~~~l~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d~~----a~~--~aD~V   71 (308)
T 2d4a_B            1 MITILGA-GKVGMATAVMLMMRGYDDLLLIARTPGKPQGEALDLAHAAAELGVDIRISGS--NSYE----DMR--GSDIV   71 (308)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHHTCSCEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEE--SCGG----GGT--TCSEE
T ss_pred             CEEEECc-CHHHHHHHHHHHhCCCCEEEEEcCChhhHHHHHHHHHHhhhhcCCCeEEEEC--CCHH----HhC--CCCEE
Confidence            4789998 9999999999998887 69999865432222111121110 00112222221  2222    233  68999


Q ss_pred             EEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCC-EEEEecc
Q 025786          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD-TLIYSST  196 (248)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~-~iV~~SS  196 (248)
                      |..+|.....  ...-.+....|......+.+.+.+..+. .+|++|-
T Consensus        72 i~~ag~~~k~--G~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tN  117 (308)
T 2d4a_B           72 LVTAGIGRKP--GMTREQLLEANANTMADLAEKIKAYAKDAIVVITTN  117 (308)
T ss_dssp             EECCSCCCCS--SCCTHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred             EEeCCCCCCC--CCcHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence            9999874322  2233455667777777788888775443 5666543

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=96.57  E-value=0.0077  Score=51.58  Aligned_cols=73  Identities=14%  Similarity=0.135  Sum_probs=46.7

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC-EEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCC-----HHHHHHHhhcC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD-----AKAVNKFFSEN  144 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-----~~~~~~~~~~~  144 (248)
                      .+|+|+|+ |+||...+..+...|+ +|++++++..+.    +..+++.   .. ..  .|..+     .+.+.++.. +
T Consensus       197 ~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~----~~a~~lG---a~-~v--i~~~~~~~~~~~~v~~~~~-~  264 (376)
T 1e3i_A          197 STCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKF----PKAKALG---AT-DC--LNPRELDKPVQDVITELTA-G  264 (376)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGH----HHHHHTT---CS-EE--ECGGGCSSCHHHHHHHHHT-S
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHH----HHHHHhC---Cc-EE--EccccccchHHHHHHHHhC-C
Confidence            79999995 9999999988888999 898887543322    2233332   11 11  23332     123333333 4


Q ss_pred             CCCEEEEcccc
Q 025786          145 AFDAVMHFAAV  155 (248)
Q Consensus       145 ~iD~li~~Ag~  155 (248)
                      ++|++|+++|.
T Consensus       265 g~Dvvid~~G~  275 (376)
T 1e3i_A          265 GVDYSLDCAGT  275 (376)
T ss_dssp             CBSEEEESSCC
T ss_pred             CccEEEECCCC
Confidence            79999999873

>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A

Probab=96.57  E-value=0.0021  Score=54.35  Aligned_cols=69  Identities=14%  Similarity=0.117  Sum_probs=52.3

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHH-hhcCCCCEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKF-FSENAFDAV  149 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~~iD~l  149 (248)
                      ++++|.|+ |.+|+.++++|.++|+ |+++++++..   . + +++     ..+.++.+|.+|++.++++ ++  +.|.+
T Consensus       116 ~~viI~G~-G~~g~~l~~~L~~~g~-v~vid~~~~~---~-~-~~~-----~~~~~i~gd~~~~~~L~~a~i~--~a~~v  181 (336)
T 1lnq_A          116 RHVVICGW-SESTLECLRELRGSEV-FVLAEDENVR---K-K-VLR-----SGANFVHGDPTRVSDLEKANVR--GARAV  181 (336)
T ss_dssp             CEEEEESC-CHHHHHHHTTGGGSCE-EEEESCGGGH---H-H-HHH-----TTCEEEESCTTSHHHHHHTCST--TEEEE
T ss_pred             CCEEEECC-cHHHHHHHHHHHhCCc-EEEEeCChhh---h-h-HHh-----CCcEEEEeCCCCHHHHHhcChh--hccEE
Confidence            68999996 9999999999999999 9988754322   1 2 222     2578899999999988876 33  57888


Q ss_pred             EEcc
Q 025786          150 MHFA  153 (248)
Q Consensus       150 i~~A  153 (248)
                      |-+.
T Consensus       182 i~~~  185 (336)
T 1lnq_A          182 IVDL  185 (336)
T ss_dssp             EECC
T ss_pred             EEcC
Confidence            7654

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=96.53  E-value=0.0073  Score=51.63  Aligned_cols=73  Identities=14%  Similarity=0.048  Sum_probs=46.5

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC-EEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCC-----HHHHHHHhhcC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD-----AKAVNKFFSEN  144 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-----~~~~~~~~~~~  144 (248)
                      .+|||+|+ |++|...++.+...|+ +|++++++..+.    +..+++..   . ..  .|..+     .+.+.++.. +
T Consensus       192 ~~VlV~Ga-G~vG~~avqla~~~Ga~~Vi~~~~~~~~~----~~~~~lGa---~-~v--i~~~~~~~~~~~~v~~~~~-~  259 (373)
T 2fzw_A          192 SVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKF----ARAKEFGA---T-EC--INPQDFSKPIQEVLIEMTD-G  259 (373)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGH----HHHHHHTC---S-EE--ECGGGCSSCHHHHHHHHTT-S
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHH----HHHHHcCC---c-eE--eccccccccHHHHHHHHhC-C
Confidence            79999995 9999999988888899 798887543332    22333321   1 11  23332     122333332 4


Q ss_pred             CCCEEEEcccc
Q 025786          145 AFDAVMHFAAV  155 (248)
Q Consensus       145 ~iD~li~~Ag~  155 (248)
                      ++|++|+++|.
T Consensus       260 g~D~vid~~g~  270 (373)
T 2fzw_A          260 GVDYSFECIGN  270 (373)
T ss_dssp             CBSEEEECSCC
T ss_pred             CCCEEEECCCc
Confidence            79999999873

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=96.49  E-value=0.0049  Score=52.42  Aligned_cols=73  Identities=16%  Similarity=0.160  Sum_probs=45.9

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC-EEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCC--C-HHHHHHHhhc--C
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG--D-AKAVNKFFSE--N  144 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~--~-~~~~~~~~~~--~  144 (248)
                      .+|+|+|+ |++|...+..+...|+ +|++++++..+    .+..+++.   .. ..  .|..  + .+..+++.+.  .
T Consensus       173 ~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~----~~~a~~lG---a~-~v--i~~~~~~~~~~~~~i~~~~~~  241 (356)
T 1pl8_A          173 HKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATR----LSKAKEIG---AD-LV--LQISKESPQEIARKVEGQLGC  241 (356)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHH----HHHHHHTT---CS-EE--EECSSCCHHHHHHHHHHHHTS
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHH----HHHHHHhC---CC-EE--EcCcccccchHHHHHHHHhCC
Confidence            79999996 9999999988888999 89998753322    22333332   12 22  2333  2 2222222221  4


Q ss_pred             CCCEEEEccc
Q 025786          145 AFDAVMHFAA  154 (248)
Q Consensus       145 ~iD~li~~Ag  154 (248)
                      ++|++|+++|
T Consensus       242 g~D~vid~~g  251 (356)
T 1pl8_A          242 KPEVTIECTG  251 (356)
T ss_dssp             CCSEEEECSC
T ss_pred             CCCEEEECCC
Confidence            6999999987

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=96.47  E-value=0.0097  Score=50.91  Aligned_cols=73  Identities=14%  Similarity=0.103  Sum_probs=46.5

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC-EEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCC-----HHHHHHHhhcC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD-----AKAVNKFFSEN  144 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-----~~~~~~~~~~~  144 (248)
                      ++|+|+| +|+||..+++.+...|+ +|++++++..+.    +..+++.   .. ..  .|..+     .+.+.++.. +
T Consensus       193 ~~VlV~G-aG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~----~~~~~lG---a~-~v--i~~~~~~~~~~~~~~~~~~-~  260 (374)
T 2jhf_A          193 STCAVFG-LGGVGLSVIMGCKAAGAARIIGVDINKDKF----AKAKEVG---AT-EC--VNPQDYKKPIQEVLTEMSN-G  260 (374)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCSEEEEECSCGGGH----HHHHHTT---CS-EE--ECGGGCSSCHHHHHHHHTT-S
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHH----HHHHHhC---Cc-eE--ecccccchhHHHHHHHHhC-C
Confidence            7999999 59999999998888999 798887543322    2223332   11 11  23332     122333322 4


Q ss_pred             CCCEEEEcccc
Q 025786          145 AFDAVMHFAAV  155 (248)
Q Consensus       145 ~iD~li~~Ag~  155 (248)
                      ++|++|+++|.
T Consensus       261 g~D~vid~~g~  271 (374)
T 2jhf_A          261 GVDFSFEVIGR  271 (374)
T ss_dssp             CBSEEEECSCC
T ss_pred             CCcEEEECCCC
Confidence            79999999873

>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}

Probab=96.47  E-value=0.018  Score=48.95  Aligned_cols=33  Identities=24%  Similarity=0.405  Sum_probs=27.9

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCC-EEEEEec
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSY-RVTIVDN  102 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~-~V~~~~r  102 (248)
                      |++|.|.||+|.||+.+++.|.++.. +++.+.+
T Consensus         4 ~~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s   37 (345)
T 2ozp_A            4 KKTLSIVGASGYAGGEFLRLALSHPYLEVKQVTS   37 (345)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHcCCCcEEEEEEC
Confidence            37899999999999999999998764 7776653

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=96.47  E-value=0.009  Score=51.50  Aligned_cols=36  Identities=25%  Similarity=0.143  Sum_probs=31.2

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCC
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRG  106 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~  106 (248)
                      .++|+|+|+ |.+|..+++.+...|++|++++++..+
T Consensus       172 g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~~~d~~~~~  207 (384)
T 1l7d_A          172 PARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAAT  207 (384)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTT
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence            389999995 999999999999999999998875433

>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*

Probab=96.46  E-value=0.018  Score=49.38  Aligned_cols=71  Identities=17%  Similarity=0.221  Sum_probs=52.3

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~l  149 (248)
                      +|+|+|+|+ |.+|+.+++.+.+.|++|++++..+..  ...    ..   .  -..+..|..|.+.+.+++++.++|+|
T Consensus        11 ~~~ili~g~-g~~~~~~~~a~~~~G~~v~~~~~~~~~--~~~----~~---~--d~~~~~~~~d~~~l~~~~~~~~~d~v   78 (391)
T 1kjq_A           11 ATRVMLLGS-GELGKEVAIECQRLGVEVIAVDRYADA--PAM----HV---A--HRSHVINMLDGDALRRVVELEKPHYI   78 (391)
T ss_dssp             CCEEEEESC-SHHHHHHHHHHHTTTCEEEEEESSTTC--GGG----GG---S--SEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCEEEEEECCCCC--chh----hh---c--cceEECCCCCHHHHHHHHHHcCCCEE
Confidence            478999986 689999999999999999998853321  111    11   1  13456788899999888876679998


Q ss_pred             EEc
Q 025786          150 MHF  152 (248)
Q Consensus       150 i~~  152 (248)
                      +..
T Consensus        79 ~~~   81 (391)
T 1kjq_A           79 VPE   81 (391)
T ss_dssp             EEC
T ss_pred             EEC
Confidence            863

>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A

Probab=96.44  E-value=0.0071  Score=51.58  Aligned_cols=78  Identities=19%  Similarity=0.192  Sum_probs=52.4

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC-EEEEEecCCCC-------------------cchhhhhhhhhcCCCCceEEEEcc
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRG-------------------NIGAVKVLQELFPEPGRLQFIYAD  130 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~-~V~~~~r~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~D  130 (248)
                      ++|+|.|+ ||+|.++++.|+..|. ++.++|+..-.                   .+.+.+.+.++.+ ..++..+..+
T Consensus       119 ~~VlvvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np-~v~v~~~~~~  196 (353)
T 3h5n_A          119 AKVVILGC-GGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNS-EISVSEIALN  196 (353)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCT-TSEEEEEECC
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCCCeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHHCC-CCeEEEeecc
Confidence            78999985 9999999999999997 78888854211                   1112223333322 2356677777


Q ss_pred             CCCHHHHHHHhhcCCCCEEEEcc
Q 025786          131 LGDAKAVNKFFSENAFDAVMHFA  153 (248)
Q Consensus       131 l~~~~~~~~~~~~~~iD~li~~A  153 (248)
                      +++..++.+ ++  +.|+||.+.
T Consensus       197 i~~~~~~~~-~~--~~DlVvd~~  216 (353)
T 3h5n_A          197 INDYTDLHK-VP--EADIWVVSA  216 (353)
T ss_dssp             CCSGGGGGG-SC--CCSEEEECC
T ss_pred             cCchhhhhH-hc--cCCEEEEec
Confidence            776654555 54  689999864

>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}

Probab=96.44  E-value=0.02  Score=48.97  Aligned_cols=68  Identities=21%  Similarity=0.326  Sum_probs=50.2

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~l  149 (248)
                      ||+|+|+|+ |.+|+.+++.+.+.|++|++++......  ..    ..   . . ..+..|..|.+.+.++++  ++|+|
T Consensus         1 M~~Ililg~-g~~g~~~~~a~~~~G~~v~~~~~~~~~~--~~----~~---~-~-~~~~~~~~d~~~l~~~~~--~~d~v   66 (380)
T 3ax6_A            1 MKKIGIIGG-GQLGKMMTLEAKKMGFYVIVLDPTPRSP--AG----QV---A-D-EQIVAGFFDSERIEDLVK--GSDVT   66 (380)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSTTCT--TG----GG---S-S-EEEECCTTCHHHHHHHHH--TCSEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCc--hh----hh---C-c-eEEECCCCCHHHHHHHHh--cCCEE
Confidence            588999996 6899999999999999999987432211  11    11   1 1 245678999999988884  68988


Q ss_pred             EE
Q 025786          150 MH  151 (248)
Q Consensus       150 i~  151 (248)
                      +.
T Consensus        67 ~~   68 (380)
T 3ax6_A           67 TY   68 (380)
T ss_dssp             EE
T ss_pred             Ee
Confidence            75

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=96.43  E-value=0.0034  Score=53.28  Aligned_cols=74  Identities=15%  Similarity=0.102  Sum_probs=46.4

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC-EEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCH---HHHHHHhhcCCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDA---KAVNKFFSENAF  146 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~---~~~~~~~~~~~i  146 (248)
                      .+|+|+|+ |+||...+..+...|+ +|++++++..    ..+..+++..   . .+  .|..+.   +.+.+.....++
T Consensus       168 ~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~----~~~~~~~lGa---~-~v--i~~~~~~~~~~v~~~t~g~g~  236 (352)
T 3fpc_A          168 DTVCVIGI-GPVGLMSVAGANHLGAGRIFAVGSRKH----CCDIALEYGA---T-DI--INYKNGDIVEQILKATDGKGV  236 (352)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHTTTCSSEEEECCCHH----HHHHHHHHTC---C-EE--ECGGGSCHHHHHHHHTTTCCE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHH----HHHHHHHhCC---c-eE--EcCCCcCHHHHHHHHcCCCCC
Confidence            78999985 9999999988888899 7998874322    2233344421   1 12  233222   233333332469


Q ss_pred             CEEEEcccc
Q 025786          147 DAVMHFAAV  155 (248)
Q Consensus       147 D~li~~Ag~  155 (248)
                      |++|.++|.
T Consensus       237 D~v~d~~g~  245 (352)
T 3fpc_A          237 DKVVIAGGD  245 (352)
T ss_dssp             EEEEECSSC
T ss_pred             CEEEECCCC
Confidence            999998874

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=96.40  E-value=0.0055  Score=51.83  Aligned_cols=76  Identities=21%  Similarity=0.223  Sum_probs=46.8

Q ss_pred             eEEEEecCCchhHHHHHHHHHHC-CCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKD-SYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~l  149 (248)
                      .+|+|+|+ |++|...+..+... |.+|++++++..+    .+..+++.   ... ++..+-...+.+.++....++|++
T Consensus       173 ~~vlv~Ga-G~vG~~a~qla~~~g~~~Vi~~~~~~~~----~~~~~~lG---a~~-~i~~~~~~~~~v~~~t~g~g~d~v  243 (345)
T 3jv7_A          173 STAVVIGV-GGLGHVGIQILRAVSAARVIAVDLDDDR----LALAREVG---ADA-AVKSGAGAADAIRELTGGQGATAV  243 (345)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESCHHH----HHHHHHTT---CSE-EEECSTTHHHHHHHHHGGGCEEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHH----HHHHHHcC---CCE-EEcCCCcHHHHHHHHhCCCCCeEE
Confidence            89999997 99999988777666 7899998754322    22333432   122 222221122344444433479999


Q ss_pred             EEcccc
Q 025786          150 MHFAAV  155 (248)
Q Consensus       150 i~~Ag~  155 (248)
                      |.+.|.
T Consensus       244 ~d~~G~  249 (345)
T 3jv7_A          244 FDFVGA  249 (345)
T ss_dssp             EESSCC
T ss_pred             EECCCC
Confidence            999873

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=96.40  E-value=0.005  Score=52.68  Aligned_cols=72  Identities=14%  Similarity=0.177  Sum_probs=45.4

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC-EEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCC---HHHHHHHhhcCCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD---AKAVNKFFSENAF  146 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~---~~~~~~~~~~~~i  146 (248)
                      ++|+|+|+ |+||...+..+...|+ +|++++++..+    .+..+++.   .. .++  |..+   .+.+.++.. +++
T Consensus       192 ~~VlV~Ga-G~vG~~a~qlak~~Ga~~Vi~~~~~~~~----~~~a~~lG---a~-~vi--~~~~~~~~~~~~~~~~-gg~  259 (371)
T 1f8f_A          192 SSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESR----LELAKQLG---AT-HVI--NSKTQDPVAAIKEITD-GGV  259 (371)
T ss_dssp             CEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHH----HHHHHHHT---CS-EEE--ETTTSCHHHHHHHHTT-SCE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHH----HHHHHHcC---CC-EEe--cCCccCHHHHHHHhcC-CCC
Confidence            79999995 9999999988888898 68888754322    22333332   11 122  3322   233433333 379


Q ss_pred             CEEEEccc
Q 025786          147 DAVMHFAA  154 (248)
Q Consensus       147 D~li~~Ag  154 (248)
                      |++|+++|
T Consensus       260 D~vid~~g  267 (371)
T 1f8f_A          260 NFALESTG  267 (371)
T ss_dssp             EEEEECSC
T ss_pred             cEEEECCC
Confidence            99999987

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=96.39  E-value=0.0094  Score=50.98  Aligned_cols=73  Identities=16%  Similarity=0.060  Sum_probs=46.0

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC-EEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCC-----HHHHHHHhhcC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD-----AKAVNKFFSEN  144 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-----~~~~~~~~~~~  144 (248)
                      .+|+|+|+ |+||...+..+...|+ +|++++++..+.    +..+++.   .. ..  .|..+     .+.+.++.. +
T Consensus       193 ~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~----~~a~~lG---a~-~v--i~~~~~~~~~~~~i~~~t~-g  260 (373)
T 1p0f_A          193 STCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKF----PKAIELG---AT-EC--LNPKDYDKPIYEVICEKTN-G  260 (373)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGH----HHHHHTT---CS-EE--ECGGGCSSCHHHHHHHHTT-S
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHH----HHHHHcC---Cc-EE--EecccccchHHHHHHHHhC-C
Confidence            79999995 9999999988888898 798887543322    2233332   11 11  23322     123333332 4


Q ss_pred             CCCEEEEcccc
Q 025786          145 AFDAVMHFAAV  155 (248)
Q Consensus       145 ~iD~li~~Ag~  155 (248)
                      ++|++|.++|.
T Consensus       261 g~Dvvid~~g~  271 (373)
T 1p0f_A          261 GVDYAVECAGR  271 (373)
T ss_dssp             CBSEEEECSCC
T ss_pred             CCCEEEECCCC
Confidence            79999999873

>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A

Probab=96.38  E-value=0.033  Score=47.06  Aligned_cols=32  Identities=19%  Similarity=0.446  Sum_probs=27.5

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHC-CCEEEEEe
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKD-SYRVTIVD  101 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~-G~~V~~~~  101 (248)
                      |++|.|.||||.+|..+.+.|.++ .+++..+.
T Consensus         4 M~kv~IvGatG~vG~~l~~~L~~~p~~el~~l~   36 (337)
T 3dr3_A            4 MLNTLIVGASGYAGAELVTYVNRHPHMNITALT   36 (337)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEE
T ss_pred             ceEEEEECCCChHHHHHHHHHHhCCCCcEEEEE
Confidence            578999999999999999999985 55777664

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=96.38  E-value=0.0088  Score=51.63  Aligned_cols=73  Identities=21%  Similarity=0.195  Sum_probs=46.8

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC-EEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCC----HHHHHHHhhcCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD----AKAVNKFFSENA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~----~~~~~~~~~~~~  145 (248)
                      .+|+|+| +|++|...+..+...|+ +|++++++..+    .+..+++   +  +..  .|.++    .+.+.++....+
T Consensus       187 ~~VlV~G-aG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~----~~~a~~l---G--a~~--i~~~~~~~~~~~v~~~t~g~g  254 (398)
T 1kol_A          187 STVYVAG-AGPVGLAAAASARLLGAAVVIVGDLNPAR----LAHAKAQ---G--FEI--ADLSLDTPLHEQIAALLGEPE  254 (398)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCSEEEEEESCHHH----HHHHHHT---T--CEE--EETTSSSCHHHHHHHHHSSSC
T ss_pred             CEEEEEC-CcHHHHHHHHHHHHCCCCeEEEEcCCHHH----HHHHHHc---C--CcE--EccCCcchHHHHHHHHhCCCC
Confidence            7999999 59999999888888899 68888753322    2233333   2  222  34333    233444333236


Q ss_pred             CCEEEEcccc
Q 025786          146 FDAVMHFAAV  155 (248)
Q Consensus       146 iD~li~~Ag~  155 (248)
                      +|++|.++|.
T Consensus       255 ~Dvvid~~G~  264 (398)
T 1kol_A          255 VDCAVDAVGF  264 (398)
T ss_dssp             EEEEEECCCT
T ss_pred             CCEEEECCCC
Confidence            9999999985

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=96.36  E-value=0.012  Score=51.15  Aligned_cols=33  Identities=24%  Similarity=0.163  Sum_probs=29.9

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~  104 (248)
                      ++|+|+|+ |.+|..+++.+...|++|++++++.
T Consensus       173 ~~V~ViGa-G~iG~~aa~~a~~~Ga~V~v~D~~~  205 (401)
T 1x13_A          173 AKVMVIGA-GVAGLAAIGAANSLGAIVRAFDTRP  205 (401)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCG
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCH
Confidence            89999995 9999999999999999999998654

>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*

Probab=96.36  E-value=0.022  Score=46.74  Aligned_cols=32  Identities=16%  Similarity=0.364  Sum_probs=26.7

Q ss_pred             eEEEEecCCchhHHHHHHHHHH-CCCEEE-EEec
Q 025786           71 THVLVTGGAGYIGSHAALRLLK-DSYRVT-IVDN  102 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~-~G~~V~-~~~r  102 (248)
                      ++|.|+|++|.+|+.+++.+.+ .|++|+ ++++
T Consensus         6 mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~   39 (273)
T 1dih_A            6 IRVAIAGAGGRMGRQLIQAALALEGVQLGAALER   39 (273)
T ss_dssp             EEEEETTTTSHHHHHHHHHHHHSTTEECCCEECC
T ss_pred             cEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEec
Confidence            6899999999999999999874 578887 4454

>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A

Probab=96.32  E-value=0.031  Score=47.93  Aligned_cols=68  Identities=24%  Similarity=0.285  Sum_probs=50.4

Q ss_pred             CceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 025786           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (248)
Q Consensus        69 ~~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~  148 (248)
                      .+++|+|.| +|.+|+.+++.+.+.|++|++++..+..  ...+    .     --.++..|..|.+.+.++++  ++|+
T Consensus        11 ~~~~IlIlG-~G~lg~~la~aa~~lG~~viv~d~~~~~--p~~~----~-----ad~~~~~~~~d~~~l~~~~~--~~dv   76 (377)
T 3orq_A           11 FGATIGIIG-GGQLGKMMAQSAQKMGYKVVVLDPSEDC--PCRY----V-----AHEFIQAKYDDEKALNQLGQ--KCDV   76 (377)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCTTC--TTGG----G-----SSEEEECCTTCHHHHHHHHH--HCSE
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEECCCCC--hhhh----h-----CCEEEECCCCCHHHHHHHHH--hCCc
Confidence            348999998 5789999999999999999999853321  1111    1     11356789999999999887  4787


Q ss_pred             EE
Q 025786          149 VM  150 (248)
Q Consensus       149 li  150 (248)
                      |.
T Consensus        77 i~   78 (377)
T 3orq_A           77 IT   78 (377)
T ss_dssp             EE
T ss_pred             ce
Confidence            64

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=96.32  E-value=0.0018  Score=52.61  Aligned_cols=66  Identities=14%  Similarity=0.175  Sum_probs=43.8

Q ss_pred             EEEEecCCchhHHHHHHHHHHCCC-EEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 025786           72 HVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (248)
Q Consensus        72 ~vlITGasg~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li  150 (248)
                      +++|.|+ |+.|++++..|++.|+ +|++++|+..+.   .+    +..   +....  +   .+++.+.++  +.|+||
T Consensus       110 ~vliiGa-Gg~a~ai~~~L~~~G~~~I~v~nR~~~ka---~~----la~---~~~~~--~---~~~~~~~~~--~aDiVI  171 (253)
T 3u62_A          110 PVVVVGA-GGAARAVIYALLQMGVKDIWVVNRTIERA---KA----LDF---PVKIF--S---LDQLDEVVK--KAKSLF  171 (253)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTCCCEEEEESCHHHH---HT----CCS---SCEEE--E---GGGHHHHHH--TCSEEE
T ss_pred             eEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHH---HH----HHH---HcccC--C---HHHHHhhhc--CCCEEE
Confidence            7899985 9999999999999998 899998753222   11    111   11111  1   234445555  579999


Q ss_pred             Ecccc
Q 025786          151 HFAAV  155 (248)
Q Consensus       151 ~~Ag~  155 (248)
                      |+...
T Consensus       172 natp~  176 (253)
T 3u62_A          172 NTTSV  176 (253)
T ss_dssp             ECSST
T ss_pred             ECCCC
Confidence            97653

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=96.32  E-value=0.0043  Score=53.16  Aligned_cols=73  Identities=18%  Similarity=0.203  Sum_probs=46.3

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC-EEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhh-----cC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFS-----EN  144 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----~~  144 (248)
                      .+|+|+|+ |++|...+..+...|+ +|++++++..    ..+..+++..   ..   ..|..+.+..+.+.+     .+
T Consensus       184 ~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~----~~~~a~~lGa---~~---vi~~~~~~~~~~i~~~~~~~~g  252 (370)
T 4ej6_A          184 STVAILGG-GVIGLLTVQLARLAGATTVILSTRQAT----KRRLAEEVGA---TA---TVDPSAGDVVEAIAGPVGLVPG  252 (370)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHH----HHHHHHHHTC---SE---EECTTSSCHHHHHHSTTSSSTT
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHH----HHHHHHHcCC---CE---EECCCCcCHHHHHHhhhhccCC
Confidence            89999997 9999999988888999 8888764322    2233344421   11   234443322222222     14


Q ss_pred             CCCEEEEccc
Q 025786          145 AFDAVMHFAA  154 (248)
Q Consensus       145 ~iD~li~~Ag  154 (248)
                      ++|++|+++|
T Consensus       253 g~Dvvid~~G  262 (370)
T 4ej6_A          253 GVDVVIECAG  262 (370)
T ss_dssp             CEEEEEECSC
T ss_pred             CCCEEEECCC
Confidence            7999999987

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=96.28  E-value=0.0065  Score=51.71  Aligned_cols=73  Identities=16%  Similarity=0.291  Sum_probs=46.0

Q ss_pred             eEEEEecCCchhHHHH-HHHH-HHCCCE-EEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCC--HHHHHHHhhcCC
Q 025786           71 THVLVTGGAGYIGSHA-ALRL-LKDSYR-VTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD--AKAVNKFFSENA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~l-a~~L-~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~  145 (248)
                      ++|+|+|+ |++|... +..+ ...|++ |++++++.....+ .+..+++.     +..+  |..+  ..++.++ . ++
T Consensus       174 ~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~-~~~~~~lG-----a~~v--~~~~~~~~~i~~~-~-gg  242 (357)
T 2b5w_A          174 SSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPT-IDIIEELD-----ATYV--DSRQTPVEDVPDV-Y-EQ  242 (357)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHH-HHHHHHTT-----CEEE--ETTTSCGGGHHHH-S-CC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHH-HHHHHHcC-----Cccc--CCCccCHHHHHHh-C-CC
Confidence            78999999 9999999 7766 677997 9999864430001 22233332     2223  4432  2224444 3 37


Q ss_pred             CCEEEEccc
Q 025786          146 FDAVMHFAA  154 (248)
Q Consensus       146 iD~li~~Ag  154 (248)
                      +|++|+++|
T Consensus       243 ~Dvvid~~g  251 (357)
T 2b5w_A          243 MDFIYEATG  251 (357)
T ss_dssp             EEEEEECSC
T ss_pred             CCEEEECCC
Confidence            999999987

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}

Probab=96.26  E-value=0.0074  Score=50.32  Aligned_cols=66  Identities=15%  Similarity=0.161  Sum_probs=43.0

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li  150 (248)
                      .+|+|+|+ |++|...+..+...|++|++++ +..+.    +..+++.   . -.++  |  |   .+++  ..++|++|
T Consensus       144 ~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~-~~~~~----~~~~~lG---a-~~v~--~--d---~~~v--~~g~Dvv~  204 (315)
T 3goh_A          144 REVLIVGF-GAVNNLLTQMLNNAGYVVDLVS-ASLSQ----ALAAKRG---V-RHLY--R--E---PSQV--TQKYFAIF  204 (315)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCEEEEEC-SSCCH----HHHHHHT---E-EEEE--S--S---GGGC--CSCEEEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCEEEEEE-ChhhH----HHHHHcC---C-CEEE--c--C---HHHh--CCCccEEE
Confidence            89999999 9999999988888899999987 44332    2233331   1 1222  3  2   2222  34799999


Q ss_pred             Ecccc
Q 025786          151 HFAAV  155 (248)
Q Consensus       151 ~~Ag~  155 (248)
                      .+.|.
T Consensus       205 d~~g~  209 (315)
T 3goh_A          205 DAVNS  209 (315)
T ss_dssp             CC---
T ss_pred             ECCCc
Confidence            99874

>2dwc_A PH0318, 433AA long hypothetical phosphoribosylglycinamide transferase; purine ribonucleotide biosynthesis; HET: ADP; 1.70A {Pyrococcus horikoshii} PDB: 2czg_A*

Probab=96.17  E-value=0.025  Score=49.24  Aligned_cols=72  Identities=17%  Similarity=0.237  Sum_probs=53.1

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~l  149 (248)
                      +|+|+|+|+ |.+|+.+++.+.+.|++|++++..+..  ...    ..   .  -..+..|..|.+.+.+++++.++|+|
T Consensus        19 ~~~ili~g~-g~~g~~~~~a~~~~G~~v~~v~~~~~~--~~~----~~---a--d~~~~~~~~d~~~l~~~~~~~~~d~V   86 (433)
T 2dwc_A           19 AQKILLLGS-GELGKEIAIEAQRLGVEVVAVDRYANA--PAM----QV---A--HRSYVGNMMDKDFLWSVVEREKPDAI   86 (433)
T ss_dssp             CCEEEEESC-SHHHHHHHHHHHHTTCEEEEEESSTTC--HHH----HH---S--SEEEESCTTCHHHHHHHHHHHCCSEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCCC--hhh----hh---c--ceEEECCCCCHHHHHHHHHHcCCCEE
Confidence            478999987 689999999999999999998853221  111    11   0  13456788899999888876679998


Q ss_pred             EEcc
Q 025786          150 MHFA  153 (248)
Q Consensus       150 i~~A  153 (248)
                      +..-
T Consensus        87 ~~~~   90 (433)
T 2dwc_A           87 IPEI   90 (433)
T ss_dssp             EECS
T ss_pred             EECc
Confidence            8643

>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A

Probab=96.16  E-value=0.011  Score=53.58  Aligned_cols=32  Identities=38%  Similarity=0.498  Sum_probs=28.4

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC-EEEEEecC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNL  103 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~-~V~~~~r~  103 (248)
                      .+|+|.| .||+|.++++.|+..|. +++++|..
T Consensus       327 arVLIVG-aGGLGs~vA~~La~aGVG~ItLvD~D  359 (615)
T 4gsl_A          327 TKVLLLG-AGTLGCYVSRALIAWGVRKITFVDNG  359 (615)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred             CeEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence            7899998 59999999999999997 78888853

>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A

Probab=96.13  E-value=0.011  Score=53.48  Aligned_cols=31  Identities=39%  Similarity=0.561  Sum_probs=27.9

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC-EEEEEec
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDN  102 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~-~V~~~~r  102 (248)
                      .+|+|.| .||+|.++++.|+..|. +++++|.
T Consensus       328 ~kVLIVG-aGGLGs~va~~La~aGVG~ItLvD~  359 (598)
T 3vh1_A          328 TKVLLLG-AGTLGCYVSRALIAWGVRKITFVDN  359 (598)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHTTTCCEEEEECC
T ss_pred             CeEEEEC-CCHHHHHHHHHHHHcCCCEEEEECC
Confidence            7899998 68999999999999997 7888874

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}

Probab=96.10  E-value=0.024  Score=47.79  Aligned_cols=76  Identities=17%  Similarity=0.161  Sum_probs=45.6

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEE-EEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-CCCCE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVT-IVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-NAFDA  148 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~-~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-~~iD~  148 (248)
                      ++|+|+|+ |++|...+..+...|+.++ ++++++.    ..+..+++.   .. ..+..+=.+..+..+.+.. ..+|+
T Consensus       162 ~~VlV~Ga-G~vG~~aiq~ak~~G~~~vi~~~~~~~----k~~~a~~lG---a~-~~i~~~~~~~~~~~~~~~~~~g~d~  232 (346)
T 4a2c_A          162 KNVIIIGA-GTIGLLAIQCAVALGAKSVTAIDISSE----KLALAKSFG---AM-QTFNSSEMSAPQMQSVLRELRFNQL  232 (346)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHH----HHHHHHHTT---CS-EEEETTTSCHHHHHHHHGGGCSSEE
T ss_pred             CEEEEECC-CCcchHHHHHHHHcCCcEEEEEechHH----HHHHHHHcC---Ce-EEEeCCCCCHHHHHHhhcccCCccc
Confidence            78999987 9999999998889998764 5553222    223334442   12 2222222233333333333 56899


Q ss_pred             EEEcccc
Q 025786          149 VMHFAAV  155 (248)
Q Consensus       149 li~~Ag~  155 (248)
                      ++.++|.
T Consensus       233 v~d~~G~  239 (346)
T 4a2c_A          233 ILETAGV  239 (346)
T ss_dssp             EEECSCS
T ss_pred             ccccccc
Confidence            9998873

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=96.10  E-value=0.0097  Score=56.22  Aligned_cols=32  Identities=22%  Similarity=0.137  Sum_probs=29.5

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEec
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDN  102 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r  102 (248)
                      .+|||.||+|++|...+......|++|+++++
T Consensus       347 ~~VLI~gaaGgvG~~aiqlAk~~Ga~V~~t~~  378 (795)
T 3slk_A          347 ESLLVHSAAGGVGMAAIQLARHLGAEVYATAS  378 (795)
T ss_dssp             CCEEEESTTBHHHHHHHHHHHHTTCCEEEECC
T ss_pred             CEEEEecCCCHHHHHHHHHHHHcCCEEEEEeC
Confidence            89999999999999999888889999999874

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=96.05  E-value=0.019  Score=48.11  Aligned_cols=81  Identities=16%  Similarity=0.030  Sum_probs=52.1

Q ss_pred             CCCceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCC
Q 025786           67 EEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAF  146 (248)
Q Consensus        67 ~~~~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~i  146 (248)
                      ..+ ++++|.|++.-+|+.+++.|+..|++|++++|+..+.....   .++..  ..........++.+++.+.+.  +.
T Consensus       175 l~g-k~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra---~~la~--~~~~~t~~~~t~~~~L~e~l~--~A  246 (320)
T 1edz_A          175 LYG-KKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRG---ESLKL--NKHHVEDLGEYSEDLLKKCSL--DS  246 (320)
T ss_dssp             TTT-CEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESC---CCSSC--CCCEEEEEEECCHHHHHHHHH--HC
T ss_pred             CCC-CEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHH---HHHhh--hcccccccccccHhHHHHHhc--cC
Confidence            344 99999998888999999999999999999986422111100   11110  001111111244577888877  46


Q ss_pred             CEEEEcccc
Q 025786          147 DAVMHFAAV  155 (248)
Q Consensus       147 D~li~~Ag~  155 (248)
                      |+||...|.
T Consensus       247 DIVIsAtg~  255 (320)
T 1edz_A          247 DVVITGVPS  255 (320)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999998875

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=95.93  E-value=0.02  Score=46.14  Aligned_cols=74  Identities=14%  Similarity=0.110  Sum_probs=48.2

Q ss_pred             eEEEEecCCchhHHHHHHHHHHC-CCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc---CCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKD-SYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE---NAF  146 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~---~~i  146 (248)
                      ++|.|.|++|.+|+.+++.+.+. +++|+.+.....   ...+.+.   . ..+   +..|+++++.+.+.++.   .++
T Consensus         1 mkV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~---dl~~~~~---~-~~D---vvIDfT~p~a~~~~~~~a~~~g~   70 (245)
T 1p9l_A            1 MRVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGD---PLSLLTD---G-NTE---VVIDFTHPDVVMGNLEFLIDNGI   70 (245)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTC---CTHHHHH---T-TCC---EEEECSCTTTHHHHHHHHHHTTC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCC---CHHHHhc---c-CCc---EEEEccChHHHHHHHHHHHHcCC
Confidence            37999999999999999999866 899886543221   1222211   1 112   56788888776655532   568


Q ss_pred             CEEEEccc
Q 025786          147 DAVMHFAA  154 (248)
Q Consensus       147 D~li~~Ag  154 (248)
                      ++|+-..|
T Consensus        71 ~~VigTTG   78 (245)
T 1p9l_A           71 HAVVGTTG   78 (245)
T ss_dssp             EEEECCCC
T ss_pred             CEEEcCCC
Confidence            88875444

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A

Probab=95.91  E-value=0.0032  Score=51.70  Aligned_cols=32  Identities=22%  Similarity=0.327  Sum_probs=28.9

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNL  103 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~  103 (248)
                      ++++|.|+ |++|++++..|.+.|++|++++|+
T Consensus       130 ~~v~iiGa-G~~g~aia~~L~~~g~~V~v~~r~  161 (275)
T 2hk9_A          130 KSILVLGA-GGASRAVIYALVKEGAKVFLWNRT  161 (275)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHHTCEEEEECSS
T ss_pred             CEEEEECc-hHHHHHHHHHHHHcCCEEEEEECC
Confidence            78999995 899999999999999999988864

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=95.88  E-value=0.0057  Score=50.37  Aligned_cols=34  Identities=12%  Similarity=0.296  Sum_probs=31.2

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecC
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNL  103 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~  103 (248)
                      |++|.|.|++|.+|..+++.|.+.|++|++++|+
T Consensus        11 mm~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~   44 (286)
T 3c24_A           11 PKTVAILGAGGKMGARITRKIHDSAHHLAAIEIA   44 (286)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHSSSEEEEECCS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECC
Confidence            4789999999999999999999999999998864

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=95.85  E-value=0.017  Score=47.78  Aligned_cols=67  Identities=15%  Similarity=0.157  Sum_probs=45.6

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li  150 (248)
                      ++++|.| .|.||+.+++.|...|++|++.+|+..+.    +...+.     .+..+  +   .+++.++++  ..|+|+
T Consensus       156 ~~v~IiG-~G~iG~~~a~~l~~~G~~V~~~dr~~~~~----~~~~~~-----g~~~~--~---~~~l~~~l~--~aDvVi  218 (293)
T 3d4o_A          156 ANVAVLG-LGRVGMSVARKFAALGAKVKVGARESDLL----ARIAEM-----GMEPF--H---ISKAAQELR--DVDVCI  218 (293)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSHHHH----HHHHHT-----TSEEE--E---GGGHHHHTT--TCSEEE
T ss_pred             CEEEEEe-eCHHHHHHHHHHHhCCCEEEEEECCHHHH----HHHHHC-----CCeec--C---hhhHHHHhc--CCCEEE
Confidence            8999999 69999999999999999999998643221    111121     12222  1   234555565  579999


Q ss_pred             Eccc
Q 025786          151 HFAA  154 (248)
Q Consensus       151 ~~Ag  154 (248)
                      ++..
T Consensus       219 ~~~p  222 (293)
T 3d4o_A          219 NTIP  222 (293)
T ss_dssp             ECCS
T ss_pred             ECCC
Confidence            8864

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=95.84  E-value=0.014  Score=48.43  Aligned_cols=67  Identities=16%  Similarity=0.134  Sum_probs=45.7

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li  150 (248)
                      ++++|.|+ |.||+.+++.|...|++|++.+|+..+   . +...+.     .+..+.     .+++.++++  +.|+||
T Consensus       158 ~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~~~~---~-~~~~~~-----g~~~~~-----~~~l~~~l~--~aDvVi  220 (300)
T 2rir_A          158 SQVAVLGL-GRTGMTIARTFAALGANVKVGARSSAH---L-ARITEM-----GLVPFH-----TDELKEHVK--DIDICI  220 (300)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHH---H-HHHHHT-----TCEEEE-----GGGHHHHST--TCSEEE
T ss_pred             CEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECCHHH---H-HHHHHC-----CCeEEc-----hhhHHHHhh--CCCEEE
Confidence            89999995 999999999999999999999864321   1 111111     122221     234556665  579999


Q ss_pred             Eccc
Q 025786          151 HFAA  154 (248)
Q Consensus       151 ~~Ag  154 (248)
                      ++..
T Consensus       221 ~~~p  224 (300)
T 2rir_A          221 NTIP  224 (300)
T ss_dssp             ECCS
T ss_pred             ECCC
Confidence            8875

>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}

Probab=95.83  E-value=0.016  Score=51.07  Aligned_cols=73  Identities=14%  Similarity=0.193  Sum_probs=45.5

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCC-C---EEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHH-HHHHhhcCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDS-Y---RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKA-VNKFFSENA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G-~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~-~~~~~~~~~  145 (248)
                      ++|+|.| .|+||+.+++.|+++. +   +|++++......    +..+..   +.++..+++|-.|.++ +.+++++ +
T Consensus        14 ~rVlIIG-aGgVG~~va~lla~~~dv~~~~I~vaD~~~~~~----~~~~~~---g~~~~~~~Vdadnv~~~l~aLl~~-~   84 (480)
T 2ph5_A           14 NRFVILG-FGCVGQALMPLIFEKFDIKPSQVTIIAAEGTKV----DVAQQY---GVSFKLQQITPQNYLEVIGSTLEE-N   84 (480)
T ss_dssp             SCEEEEC-CSHHHHHHHHHHHHHBCCCGGGEEEEESSCCSC----CHHHHH---TCEEEECCCCTTTHHHHTGGGCCT-T
T ss_pred             CCEEEEC-cCHHHHHHHHHHHhCCCCceeEEEEeccchhhh----hHHhhc---CCceeEEeccchhHHHHHHHHhcC-C
Confidence            5799999 8999999999999874 4   688887433222    111222   1233333344445544 5557764 3


Q ss_pred             CCEEEEcc
Q 025786          146 FDAVMHFA  153 (248)
Q Consensus       146 iD~li~~A  153 (248)
                       |+|||.+
T Consensus        85 -DvVIN~s   91 (480)
T 2ph5_A           85 -DFLIDVS   91 (480)
T ss_dssp             -CEEEECC
T ss_pred             -CEEEECC
Confidence             9999854

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=95.83  E-value=0.024  Score=46.60  Aligned_cols=34  Identities=24%  Similarity=0.415  Sum_probs=31.0

Q ss_pred             CCceEEEEecCCchhHHHHHHHHHHCCCEEEEEec
Q 025786           68 EGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDN  102 (248)
Q Consensus        68 ~~~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r  102 (248)
                      .| ++++|.|+++-+|+.++..|+..|+.|+++.+
T Consensus       159 ~G-k~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~  192 (285)
T 3p2o_A          159 EG-KDAVIIGASNIVGRPMATMLLNAGATVSVCHI  192 (285)
T ss_dssp             TT-CEEEEECCCTTTHHHHHHHHHHTTCEEEEECT
T ss_pred             CC-CEEEEECCCchHHHHHHHHHHHCCCeEEEEeC
Confidence            44 99999999999999999999999999998753

>2w70_A Biotin carboxylase; ligase, ATP-binding, fatty acid biosynthesis, nucleotide-BIN lipid synthesis, ATP-grAsp domain, fragment screening; HET: L22; 1.77A {Escherichia coli} PDB: 1bnc_A 2j9g_A* 2v58_A* 2v59_A* 2v5a_A* 2vr1_A* 2w6m_A* 1dv1_A* 2w6o_A* 2w6n_A* 2w6q_A* 2w6z_A* 2w6p_A* 2w71_A* 3jzf_A* 3jzi_A* 3rv3_A* 3rup_A* 1dv2_A* 3rv4_A* ...

Probab=95.82  E-value=0.015  Score=50.91  Aligned_cols=75  Identities=9%  Similarity=-0.015  Sum_probs=50.2

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEE-----ccCCCHHHHHHHhhcC
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIY-----ADLGDAKAVNKFFSEN  144 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-----~Dl~~~~~~~~~~~~~  144 (248)
                      ||+|||+|+ |.+|..+++.+.+.|++|++++.........    ...   ......+.     .|..|.+.+.+++++.
T Consensus         2 ~k~ilI~g~-g~~~~~~~~a~~~~G~~vv~v~~~~~~~~~~----~~~---ad~~~~~~p~~~~~~~~d~~~l~~~~~~~   73 (449)
T 2w70_A            2 LDKIVIANR-GEIALRILRACKELGIKTVAVHSSADRDLKH----VLL---ADETVCIGPAPSVKSYLNIPAIISAAEIT   73 (449)
T ss_dssp             CSEEEECCC-HHHHHHHHHHHHHHTCEEEEEEEGGGTTCHH----HHH---SSEEEEEECSSGGGTTTCHHHHHHHHHHH
T ss_pred             CceEEEeCC-cHHHHHHHHHHHHcCCeEEEEeccccccCch----hhh---CCEEEEcCCCCccccccCHHHHHHHHHHc
Confidence            579999996 6899999999999999999886322111111    111   11121111     1777888898888776


Q ss_pred             CCCEEEEc
Q 025786          145 AFDAVMHF  152 (248)
Q Consensus       145 ~iD~li~~  152 (248)
                      ++|.|+-.
T Consensus        74 ~~d~v~~~   81 (449)
T 2w70_A           74 GAVAIHPG   81 (449)
T ss_dssp             TCCEEECC
T ss_pred             CCCEEEEC
Confidence            79998754

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}

Probab=95.78  E-value=0.037  Score=45.81  Aligned_cols=34  Identities=32%  Similarity=0.514  Sum_probs=30.9

Q ss_pred             CCceEEEEecCCchhHHHHHHHHHHCCCEEEEEec
Q 025786           68 EGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDN  102 (248)
Q Consensus        68 ~~~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r  102 (248)
                      .| ++++|.|+++-+|+.++..|+..|+.|+++.+
T Consensus       164 ~G-k~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~  197 (300)
T 4a26_A          164 AG-KRAVVLGRSNIVGAPVAALLMKENATVTIVHS  197 (300)
T ss_dssp             TT-CEEEEECCCTTTHHHHHHHHHHTTCEEEEECT
T ss_pred             CC-CEEEEECCCchHHHHHHHHHHHCCCeEEEEeC
Confidence            44 99999999999999999999999999998864

>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*

Probab=95.77  E-value=0.087  Score=45.18  Aligned_cols=67  Identities=22%  Similarity=0.312  Sum_probs=48.6

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~l  149 (248)
                      +|+|+|.|+ |.+|+.+++.+.+.|++|++++......  ...    .     .-..+..|..|.+.+.++++  .+|+|
T Consensus        14 ~k~IlIlG~-G~~g~~la~aa~~~G~~vi~~d~~~~~~--~~~----~-----ad~~~~~~~~d~~~l~~~~~--~~dvI   79 (389)
T 3q2o_A           14 GKTIGIIGG-GQLGRMMALAAKEMGYKIAVLDPTKNSP--CAQ----V-----ADIEIVASYDDLKAIQHLAE--ISDVV   79 (389)
T ss_dssp             TSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSTTCT--TTT----T-----CSEEEECCTTCHHHHHHHHH--TCSEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCCCCc--hHH----h-----CCceEecCcCCHHHHHHHHH--hCCEe
Confidence            489999985 6799999999999999999998533211  000    0     11245678899999998887  46877


Q ss_pred             E
Q 025786          150 M  150 (248)
Q Consensus       150 i  150 (248)
                      .
T Consensus        80 ~   80 (389)
T 3q2o_A           80 T   80 (389)
T ss_dssp             E
T ss_pred             e
Confidence            3

>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6

Probab=95.66  E-value=0.072  Score=44.03  Aligned_cols=35  Identities=26%  Similarity=0.507  Sum_probs=31.7

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCC
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~  104 (248)
                      +++|.|.||.|.+|..++..|.+.|++|++++|+.
T Consensus        21 ~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~   55 (298)
T 2pv7_A           21 IHKIVIVGGYGKLGGLFARYLRASGYPISILDRED   55 (298)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTC
T ss_pred             CCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCc
Confidence            46899999999999999999999999999998654

>2vpq_A Acetyl-COA carboxylase; bacteria, ATP-grAsp domain, biotin carboxylase, ligase; HET: ANP; 2.1A {Staphylococcus aureus}

Probab=95.62  E-value=0.051  Score=47.56  Aligned_cols=75  Identities=8%  Similarity=0.013  Sum_probs=50.6

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEE-----ccCCCHHHHHHHhhcC
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIY-----ADLGDAKAVNKFFSEN  144 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-----~Dl~~~~~~~~~~~~~  144 (248)
                      ||+|+|.| +|.+|..+++.+.+.|++|++++..........    ..   ......+.     .|..|.+.+.+++++.
T Consensus         1 ~k~ilI~g-~g~~~~~i~~a~~~~G~~vv~v~~~~~~~~~~~----~~---ad~~~~i~~~~~~~~~~d~~~l~~~~~~~   72 (451)
T 2vpq_A            1 MKKVLIAN-RGEIAVRIIRACRDLGIQTVAIYSEGDKDALHT----QI---ADEAYCVGPTLSKDSYLNIPNILSIATST   72 (451)
T ss_dssp             -CEEEECC-CHHHHHHHHHHHHHTTCEEEEEEEGGGTTCHHH----HH---SSEEEEEECSSGGGTTTCHHHHHHHHHHT
T ss_pred             CceEEEeC-CCHHHHHHHHHHHHcCCEEEEEecccccccchh----hh---CCEEEEcCCCCccccccCHHHHHHHHHHc
Confidence            47899999 568999999999999999998874221111111    11   11122221     4777888898888777


Q ss_pred             CCCEEEEc
Q 025786          145 AFDAVMHF  152 (248)
Q Consensus       145 ~iD~li~~  152 (248)
                      ++|+|+-.
T Consensus        73 ~~d~v~~~   80 (451)
T 2vpq_A           73 GCDGVHPG   80 (451)
T ss_dssp             TCSEEECC
T ss_pred             CCCEEEEC
Confidence            89998864

>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*

Probab=95.60  E-value=0.082  Score=44.80  Aligned_cols=69  Identities=19%  Similarity=0.240  Sum_probs=46.1

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCC-CHHHHHHHhhcCCCCE
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG-DAKAVNKFFSENAFDA  148 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-~~~~~~~~~~~~~iD~  148 (248)
                      ||+|+|.| +|..|..++..+.+.|++|++++.++...  ..    .+   ..  .++..|.. |.+.+..+.+  ++|+
T Consensus         1 MK~I~ilG-gg~~g~~~~~~Ak~~G~~vv~vd~~~~~~--~~----~~---aD--~~~~~~~~~d~~~~~~~~~--~~D~   66 (363)
T 4ffl_A            1 MKTICLVG-GKLQGFEAAYLSKKAGMKVVLVDKNPQAL--IR----NY---AD--EFYCFDVIKEPEKLLELSK--RVDA   66 (363)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCTTCT--TT----TT---SS--EEEECCTTTCHHHHHHHHT--SSSE
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCCCCh--hH----hh---CC--EEEECCCCcCHHHHHHHhc--CCCE
Confidence            69999999 47899999999999999999998543211  00    01   11  34455654 5555555444  6898


Q ss_pred             EEEc
Q 025786          149 VMHF  152 (248)
Q Consensus       149 li~~  152 (248)
                      |+-.
T Consensus        67 v~~~   70 (363)
T 4ffl_A           67 VLPV   70 (363)
T ss_dssp             EEEC
T ss_pred             EEEC
Confidence            8744

>4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii}

Probab=95.59  E-value=0.05  Score=46.79  Aligned_cols=71  Identities=10%  Similarity=0.039  Sum_probs=51.7

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~l  149 (248)
                      +++|||+|++ .++..+++.+.+.|++|++++..... ....    ..   .  -.++.+|..|.+.+.+++++.++|.|
T Consensus         7 ~~~ilI~g~g-~~~~~~~~a~~~~G~~~v~v~~~~~~-~~~~----~~---a--d~~~~~~~~d~~~l~~~~~~~~~d~v   75 (403)
T 4dim_A            7 NKRLLILGAG-RGQLGLYKAAKELGIHTIAGTMPNAH-KPCL----NL---A--DEISYMDISNPDEVEQKVKDLNLDGA   75 (403)
T ss_dssp             CCEEEEECCC-GGGHHHHHHHHHHTCEEEEEECSSCC-HHHH----HH---C--SEEEECCTTCHHHHHHHTTTSCCSEE
T ss_pred             CCEEEEECCc-HhHHHHHHHHHHCCCEEEEEcCCCCC-Ccch----hh---C--CeEEEecCCCHHHHHHHHHHcCCCEE
Confidence            3799999975 47999999999999999998742111 1111    11   1  13467788999999999988789998


Q ss_pred             EE
Q 025786          150 MH  151 (248)
Q Consensus       150 i~  151 (248)
                      +-
T Consensus        76 ~~   77 (403)
T 4dim_A           76 AT   77 (403)
T ss_dssp             EC
T ss_pred             Ee
Confidence            74

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	248
d1db3a_	357	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric	2e-49
d2b69a1	312	c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1	3e-43
d1kewa_	361	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	2e-41
d1t2aa_	347	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H	8e-41
d1udca_	338	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	2e-37
d1z45a2	347	c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-ep	3e-36
d1sb8a_	341	c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase W	9e-36
d1e6ua_	315	c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimeras	7e-34
d1r6da_	322	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	4e-33
d1orra_	338	c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella	3e-31
d1oc2a_	346	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	3e-29
d1n7ha_	339	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cr	3e-28
d1rpna_	321	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomo	9e-26
d1ek6a_	346	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	1e-25
d2c5aa1	363	c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {T	2e-25
d1rkxa_	356	c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia	4e-18
d1i24a_	393	c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1	7e-17
d1n2sa_	298	c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reduct	9e-16
d1gy8a_	383	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	5e-15
d2blla1	342	c.2.1.2 (A:316-657) Polymyxin resistance protein A	2e-14
d1y1pa1	342	c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo	5e-12
d1vl0a_	281	c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD	8e-12
d1eq2a_	307	c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimer	1e-11
d1qyca_	307	c.2.1.2 (A:) Phenylcoumaran benzylic ether reducta	3e-10
d2q46a1	252	c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (	7e-10
d1hdoa_	205	c.2.1.2 (A:) Biliverdin IX beta reductase {Human (	8e-10
d1qyda_	312	c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {	4e-09
d2gdza1	254	c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog	3e-08
d1yxma1	297	c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA re	3e-08
d1g0oa_	272	c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase	4e-08
d1xkqa_	272	c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorh	4e-08
d1vl8a_	251	c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga	6e-08
d1h5qa_	260	c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga	7e-08
d2bgka1	268	c.2.1.2 (A:11-278) Rhizome secoisolariciresinol de	7e-08
d1zk4a1	251	c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase	8e-08
d1gega_	255	c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Kl	8e-08
d1zema1	260	c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconoba	1e-07
d1spxa_	264	c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato	1e-07
d2ae2a_	259	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	1e-07
d2rhca1	257	c.2.1.2 (A:5-261) beta-keto acyl carrier protein r	2e-07
d1xgka_	350	c.2.1.2 (A:) Negative transcriptional regulator Nm	2e-07
d1xhla_	274	c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh	2e-07
d1w6ua_	294	c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondr	2e-07
d1cyda_	242	c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul	2e-07
d1ja9a_	259	c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reduc	3e-07
d2c07a1	251	c.2.1.2 (A:54-304) beta-keto acyl carrier protein	3e-07
d1iy8a_	258	c.2.1.2 (A:) Levodione reductase {Corynebacterium	3e-07
d1ae1a_	258	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	3e-07
d1hxha_	253	c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge	3e-07
d1fmca_	255	c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase	4e-07
d2a4ka1	241	c.2.1.2 (A:2-242) beta-keto acyl carrier protein r	4e-07
d1pr9a_	244	c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie	4e-07
d1geea_	261	c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megat	5e-07
d1edoa_	244	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	5e-07
d1xg5a_	257	c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41	6e-07
d1hdca_	254	c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr	8e-07
d1ydea1	250	c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase	9e-07
d1xq1a_	259	c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara	1e-06
d1bdba_	276	c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy	2e-06
d2ew8a1	247	c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenas	2e-06
d1yb1a_	244	c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase	3e-06
d1k2wa_	256	c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter s	4e-06
d1x1ta1	260	c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydroge	4e-06
d1nffa_	244	c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycob	4e-06
d2bd0a1	240	c.2.1.2 (A:2-241) Bacterial sepiapterin reductase	6e-06
d2d1ya1	248	c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T	1e-05
d1uzma1	237	c.2.1.2 (A:9-245) beta-keto acyl carrier protein r	1e-05
d1ulsa_	242	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	2e-05
d2a35a1	212	c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pse	2e-05
d1yo6a1	250	c.2.1.2 (A:1-250) Putative carbonyl reductase snif	3e-05
d1gz6a_	302	c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase do	4e-05
d1zmta1	252	c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Ag	5e-05
d1jtva_	285	c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroi	6e-05
d1wmaa1	275	c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydrox	8e-05
d1sbya1	254	c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase	9e-05
d2bkaa1	232	c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {H	1e-04
d1dhra_	236	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	1e-04
d1mxha_	266	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	2e-04
d1oaaa_	259	c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus mus	4e-04
d1ooea_	235	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	5e-04
d1fjha_	257	c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase	9e-04
d1uaya_	241	c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogena	0.001
d1q7ba_	243	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	0.001
d1xu9a_	269	c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase	0.001
d2fr1a1	259	c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI	0.001
d1qsga_	258	c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli	0.001
d2o23a1	248	c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydr	0.002
d1o5ia_	234	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	0.002
d2ag5a1	245	c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR fami	0.002
d1e7wa_	284	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	0.002
d1snya_	248	c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly	0.002
d1ulua_	256	c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermoph	0.002

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

 Score =  163 bits (414), Expect = 2e-49
 Identities = 47/175 (26%), Positives = 75/175 (42%), Gaps = 5/175 (2%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNL-SRGNIGAVKVL-QELFPEPGRLQFIYAD 130
            L+TG  G  GS+ A  LL+  Y V  +    S  N   V  + Q+      +    Y D
Sbjct: 4   ALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGD 63

Query: 131 LGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDT 190
           L D   + +   E   D V +  A+++V  S   P          TL +LE++   G++ 
Sbjct: 64  LSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEK 123

Query: 191 ---LIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAV 242
                 +ST   YG  +++P  E TP  P +PY  AK  A  I +++ ++  M  
Sbjct: 124 KTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGMYA 178

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  146 bits (370), Expect = 3e-43
 Identities = 50/175 (28%), Positives = 79/175 (45%), Gaps = 17/175 (9%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           +L+TGGAG++GSH   +L+ D + VT+VDN   G    V+           +     +L 
Sbjct: 4   ILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHW---------IGHENFELI 54

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
           +   V   + E   D + H A+ A       +P+K     T  TL +L    R G   L+
Sbjct: 55  NHDVVEPLYIE--VDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA-RLL 111

Query: 193 YSSTCATYGEPEKMPITEE-----TPQAPINPYGKAKKMAEDIILDFSKNSDMAV 242
            +ST   YG+PE  P +E+      P  P   Y + K++AE +   + K   + V
Sbjct: 112 LASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEV 166

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score =  142 bits (360), Expect = 2e-41
 Identities = 45/190 (23%), Positives = 82/190 (43%), Gaps = 23/190 (12%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTI-VDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
           +L+TGGAG+IGS     ++K++    + +D L+    G ++ L ++     R  F +AD+
Sbjct: 3   ILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYA--GNLESLSDISESN-RYNFEHADI 59

Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDT- 190
            D+  + + F +   DAVMH AA ++V  S   P  +       T  +LE   ++     
Sbjct: 60  CDSAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALG 119

Query: 191 --------LIYSSTCATYGEPEKMPI----------TEETPQAPINPYGKAKKMAEDIIL 232
                     + ST   YG+                TE T  AP +PY  +K  ++ ++ 
Sbjct: 120 EDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVR 179

Query: 233 DFSKNSDMAV 242
            + +   +  
Sbjct: 180 AWRRTYGLPT 189

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  141 bits (355), Expect = 8e-41
 Identities = 46/174 (26%), Positives = 79/174 (45%), Gaps = 6/174 (3%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNL-SRGNIGAVKVLQELFPE--PGRLQFIYA 129
            L+TG  G  GS+ A  LL+  Y V  +    S  N G ++ L +       G ++  Y 
Sbjct: 4   ALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYG 63

Query: 130 DLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD 189
           DL D+  + K  +E     + +  A ++V  S              TL +L+++   G+ 
Sbjct: 64  DLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLI 123

Query: 190 ---TLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDM 240
                  +ST   YG+ +++P  E TP  P +PYG AK  A  I+++F +  ++
Sbjct: 124 NSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFREAYNL 177

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

 Score =  132 bits (332), Expect = 2e-37
 Identities = 62/177 (35%), Positives = 96/177 (54%), Gaps = 3/177 (1%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           VLVTGG+GYIGSH  ++LL++ + V I+DNL       + V++ L  +     F+  D+ 
Sbjct: 3   VLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGK--HPTFVEGDIR 60

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
           +   + +   ++A D V+HFA +  VGES   PL+YY N  + TL ++ +M    V   I
Sbjct: 61  NEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFI 120

Query: 193 YSSTCATYGEPEKMPITEET-PQAPINPYGKAKKMAEDIILDFSKNSDMAVLQCHRF 248
           +SS+   YG+  K+P  E      P +PYGK+K M E I+ D  K      +   R+
Sbjct: 121 FSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRY 177

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  129 bits (323), Expect = 3e-36
 Identities = 71/168 (42%), Positives = 95/168 (56%), Gaps = 6/168 (3%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           VLVTGGAGYIGSH  + L+++ Y   + DNLS     +V  L+ L      + F   DL 
Sbjct: 4   VLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKH--HIPFYEVDLC 61

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
           D K + K F E   D+V+HFA +  VGEST  PL+YYHN    T+V+LE M ++ V   +
Sbjct: 62  DRKGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFV 121

Query: 193 YSSTCATYGE----PEKMPITEETPQAPINPYGKAKKMAEDIILDFSK 236
           +SS+   YG+    P  +PI EE P  P NPYG  K   E+I+ D   
Sbjct: 122 FSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYAIENILNDLYN 169

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} Length = 341

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

 Score =  127 bits (320), Expect = 9e-36
 Identities = 44/170 (25%), Positives = 75/170 (44%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            L+TG AG+IGS+    LLK   +V  +DN + G+   +  ++ L  E     F +    
Sbjct: 19  WLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGD 78

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
                +   +    D V+H AA+  V  S  DP+          L +L +     V +  
Sbjct: 79  IRNLDDCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFT 138

Query: 193 YSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAV 242
           Y+++ +TYG+   +P  E+T   P++PY   K + E     FS+    + 
Sbjct: 139 YAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNELYADVFSRCYGFST 188

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} Length = 315

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

 Score =  122 bits (306), Expect = 7e-34
 Identities = 28/174 (16%), Positives = 59/174 (33%), Gaps = 29/174 (16%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           V + G  G +GS    +L +      ++                             +L 
Sbjct: 5   VFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDEL-----------------------NLL 41

Query: 133 DAKAVNKFFSENAFDAVMHFA-AVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTL 191
           D++AV+ FF+    D V   A  V  +  +   P  + +        ++ +  ++ V+ L
Sbjct: 42  DSRAVHDFFASERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKL 101

Query: 192 IYSSTCATYGEPEKMPITEE-----TPQAPINPYGKAKKMAEDIILDFSKNSDM 240
           ++  +   Y +  K P+ E      T +    PY  AK     +   +++    
Sbjct: 102 LFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQYGR 155

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} Length = 322

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

 Score =  120 bits (301), Expect = 4e-33
 Identities = 50/176 (28%), Positives = 84/176 (47%), Gaps = 11/176 (6%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSY------RVTIVDNLSRGNIGAVKVLQELFPEPGRLQF 126
           +LVTGGAG+IGSH   +LL  +Y       V ++D+L+    G    L  +  +P RL+F
Sbjct: 3   LLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYA--GNRANLAPVDADP-RLRF 59

Query: 127 IYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARH 186
           ++ D+ DA            DA++HFAA ++V  S      +       T  +L+     
Sbjct: 60  VHGDIRDAG--LLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDA 117

Query: 187 GVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAV 242
           GV  +++ ST   YG  +    TE +P  P +PY  +K  ++ +   + +   + V
Sbjct: 118 GVGRVVHVSTNQVYGSIDSGSWTESSPLEPNSPYAASKAGSDLVARAYHRTYGLDV 173

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

 Score =  115 bits (288), Expect = 3e-31
 Identities = 48/193 (24%), Positives = 85/193 (44%), Gaps = 20/193 (10%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           +L+TGG G++GS+ A   L     + + DNLSR   GA   L  L    G  +F++ D+ 
Sbjct: 3   LLITGGCGFLGSNLASFALSQGIDLIVFDNLSRK--GATDNLHWL-SSLGNFEFVHGDIR 59

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDT-L 191
           +   V +  ++   D+  H A    +  S  +P   +      TL +LE++ ++  +  +
Sbjct: 60  NKNDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNI 119

Query: 192 IYSSTCATYGEPEKMP----------------ITEETPQAPINPYGKAKKMAEDIILDFS 235
           IYSST   YG+ E+                    E T     +PYG +K  A+  +LD++
Sbjct: 120 IYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYA 179

Query: 236 KNSDMAVLQCHRF 248
           +   +  +     
Sbjct: 180 RIFGLNTVVFRHS 192

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score =  110 bits (275), Expect = 3e-29
 Identities = 43/183 (23%), Positives = 84/183 (45%), Gaps = 21/183 (11%)

Query: 72  HVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYA 129
           +++VTGGAG+IGS+    +  +     VT++D L+    G    L+ +  +  R++ +  
Sbjct: 4   NIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYA--GNKANLEAILGD--RVELVVG 59

Query: 130 DLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD 189
           D+ DA+ V+K  ++      +H+AA ++   S  DP  + H     T  +LE+  ++ + 
Sbjct: 60  DIADAELVDKLAAKADAI--VHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDIR 117

Query: 190 TLIYSSTCATYGE------------PEKMPITEETPQAPINPYGKAKKMAEDIILDFSKN 237
              + ST   YG+                  T ET   P +PY   K  ++ I+  + ++
Sbjct: 118 F-HHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRS 176

Query: 238 SDM 240
             +
Sbjct: 177 FGV 179

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 339

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  107 bits (268), Expect = 3e-28
 Identities = 39/177 (22%), Positives = 67/177 (37%), Gaps = 7/177 (3%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNL-SRGNIGAVKVLQEL--FPEPGRLQFIYA 129
            L+TG  G  GS+    LL   Y V  +    S  N   +  +           ++  YA
Sbjct: 4   ALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYA 63

Query: 130 DLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLES----MAR 185
           DL DA ++ ++      D V + AA ++V  S   P      + +  L +LE+       
Sbjct: 64  DLTDASSLRRWIDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTID 123

Query: 186 HGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAV 242
            G     Y +  +        P +E TP  P +PY  +K  A    +++ +   +  
Sbjct: 124 SGRTVKYYQAGSSEMFGSTPPPQSETTPFHPRSPYAASKCAAHWYTVNYREAYGLFA 180

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Length = 321

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score =  100 bits (250), Expect = 9e-26
 Identities = 44/171 (25%), Positives = 75/171 (43%), Gaps = 4/171 (2%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            LVTG  G  G++ A  LL+  YRV  +      +      L+EL  E   +Q+   D+ 
Sbjct: 3   ALVTGITGQDGAYLAKLLLEKGYRVHGLVARR--SSDTRWRLRELGIEG-DIQYEDGDMA 59

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
           DA +V +   +     V + AA ++VG S   P+            +LE++ +   +T  
Sbjct: 60  DACSVQRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRF 119

Query: 193 -YSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAV 242
             +ST   +G  +     E TP  P +PYG AK     I +++ ++  +  
Sbjct: 120 YQASTSEMFGLIQAERQDENTPFYPRSPYGVAKLYGHWITVNYRESFGLHA 170

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  100 bits (249), Expect = 1e-25
 Identities = 66/181 (36%), Positives = 94/181 (51%), Gaps = 5/181 (2%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFP----EPGRLQFIY 128
           VLVTGGAGYIGSH  L LL+  Y   ++DN      G   + + L          ++F  
Sbjct: 5   VLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEE 64

Query: 129 ADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV 188
            D+ D  A+ + F + +F AV+HFA +  VGES   PL YY    + T+ +LE M  HGV
Sbjct: 65  MDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGV 124

Query: 189 DTLIYSSTCATYGEPEKMPITEETPQ-APINPYGKAKKMAEDIILDFSKNSDMAVLQCHR 247
             L++SS+   YG P+ +P+ E  P     NPYGK+K   E++I D  +          R
Sbjct: 125 KNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTWNAVLLR 184

Query: 248 F 248
           +
Sbjct: 185 Y 185

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 363

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  100 bits (250), Expect = 2e-25
 Identities = 30/177 (16%), Positives = 64/177 (36%), Gaps = 17/177 (9%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           + +TG  G+I SH A RL  + + V   D     +         +  +    +F   DL 
Sbjct: 18  ISITGAGGFIASHIARRLKHEGHYVIASDWKKNEH---------MTEDMFCDEFHLVDLR 68

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
             +   K          +           +   +  Y+N    +  ++E+   +G+    
Sbjct: 69  VMENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTM-ISFNMIEAARINGIKRFF 127

Query: 193 YSSTCATYGEPEKMPIT-------EETPQAPINPYGKAKKMAEDIILDFSKNSDMAV 242
           Y+S+   Y E +++  T       +  P  P + +G  K   E++   ++K+  +  
Sbjct: 128 YASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDFGIEC 184

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Length = 356

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

 Score = 80.3 bits (196), Expect = 4e-18
 Identities = 33/178 (18%), Positives = 59/178 (33%), Gaps = 6/178 (3%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           V VTG  G+ G   +L L      V      +         L E       +Q    D+ 
Sbjct: 11  VFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTV----PSLFETARVADGMQSEIGDIR 66

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
           D   + +   E   + V H AA   V  S  +P++ Y      T+ +LE++   G    +
Sbjct: 67  DQNKLLESIREFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAV 126

Query: 193 YSSTCATYGEPEKMPITEETPQ--APINPYGKAKKMAEDIILDFSKNSDMAVLQCHRF 248
            + T     + ++        +     +PY  +K  AE +   +  +           
Sbjct: 127 VNITSDKCYDNKEWIWGYRENEAMGGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHG 184

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 393

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 76.9 bits (187), Expect = 7e-17
 Identities = 29/99 (29%), Positives = 40/99 (40%), Gaps = 14/99 (14%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPG---------- 122
           V+V GG GY G   AL L K +Y V IVDNL R        L+ L P             
Sbjct: 4   VMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKA 63

Query: 123 ----RLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAY 157
                ++    D+ D + + + F     D+V+HF     
Sbjct: 64  LTGKSIELYVGDICDFEFLAESFKSFEPDSVVHFGEQRS 102

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} Length = 298

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

 Score = 73.1 bits (177), Expect = 9e-16
 Identities = 30/176 (17%), Positives = 57/176 (32%), Gaps = 22/176 (12%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           +L+ G  G +G     R L     +  +D  S+                        D  
Sbjct: 3   ILLFGKTGQVGWELQ-RSLAPVGNLIALDVHSK--------------------EFCGDFS 41

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
           + K V +   +   D +++ AA   V ++  +P        ++   + ++    G   + 
Sbjct: 42  NPKGVAETVRKLRPDVIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGAWVVH 101

Query: 193 YSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVLQCHRF 248
           YS+     G    +P  E    +P+N YGK K   E  + D      +        
Sbjct: 102 YSTDYVFPG-TGDIPWQETDATSPLNVYGKTKLAGEKALQDNCPKHLIFRTSWVYA 156

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} Length = 383

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

 Score = 71.4 bits (173), Expect = 5e-15
 Identities = 61/199 (30%), Positives = 91/199 (45%), Gaps = 23/199 (11%)

Query: 73  VLVTGGAGYIGSHAALRLLKDS-YRVTIVDNLSRGNIGAVKV--------------LQEL 117
           VLV GGAGYIGSH    LL+D+ + V IVD+L   +  +  V                + 
Sbjct: 5   VLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKP 64

Query: 118 FPEPGRLQFIYADLGDAKAVNK-FFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNT 176
                       D+ +   +N  F      DAV+H  A   VGES  DPLKYY N     
Sbjct: 65  PWADRYAALEVGDVRNEDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGI 124

Query: 177 LVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQ-------APINPYGKAKKMAED 229
           L +L++M  H  D +I+SS+ A +G P    ++            +P +PYG++K +AE 
Sbjct: 125 LRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAER 184

Query: 230 IILDFSKNSDMAVLQCHRF 248
           +I D ++   +  +    F
Sbjct: 185 MIRDCAEAYGIKGICLRYF 203

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

 Score = 69.6 bits (168), Expect = 2e-14
 Identities = 33/183 (18%), Positives = 68/183 (37%), Gaps = 16/183 (8%)

Query: 73  VLVTGGAGYIGSHAALRLLKD-SYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
           VL+ G  G+IG+H   RLL++  Y V  +D  S         +      P    F+  D+
Sbjct: 3   VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDA-------ISRFLNHP-HFHFVEGDI 54

Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTL 191
                  ++  +   D V+   A+A   E T +PL+ +       L ++    ++    +
Sbjct: 55  SIHSEWIEYHVKK-CDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRII 113

Query: 192 IYSSTCATYGEPEKMPITEETPQ------APINPYGKAKKMAEDIILDFSKNSDMAVLQC 245
             S++       +K    + +         P   Y  +K++ + +I  + +   +     
Sbjct: 114 FPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLF 173

Query: 246 HRF 248
             F
Sbjct: 174 RPF 176

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

 Score = 62.5 bits (150), Expect = 5e-12
 Identities = 32/182 (17%), Positives = 56/182 (30%), Gaps = 25/182 (13%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           VLVTG  G++ SH   +LL+  Y+V      S   +  ++   +          +  D+ 
Sbjct: 14  VLVTGANGFVASHVVEQLLEHGYKVRGTAR-SASKLANLQKRWDAKYPGRFETAVVEDML 72

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
              A ++     A  A +       V  S          I      +  + A   V   +
Sbjct: 73  KQGAYDEVIKGAAGVAHIAS----VVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFV 128

Query: 193 YSSTCATYGEPEK--------------------MPITEETPQAPINPYGKAKKMAEDIIL 232
            +S+  +   P+                       + E  PQ  +  Y  +K  AE    
Sbjct: 129 LTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAW 188

Query: 233 DF 234
            F
Sbjct: 189 KF 190

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} Length = 281

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

 Score = 61.4 bits (147), Expect = 8e-12
 Identities = 34/168 (20%), Positives = 56/168 (33%), Gaps = 25/168 (14%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           +L+TG  G +G     +L   +  V   D                            D+ 
Sbjct: 4   ILITGANGQLGREIQKQLKGKNVEVIPTD------------------------VQDLDIT 39

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
           +  AVNKFF+E   + V++ AA   V +        Y         +  +    G + + 
Sbjct: 40  NVLAVNKFFNEKKPNVVINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGAEIVQ 99

Query: 193 YSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDM 240
            S+         K PITE     P + YGK K   E+ +   +    +
Sbjct: 100 ISTDYVFD-GEAKEPITEFDEVNPQSAYGKTKLEGENFVKALNPKYYI 146

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

 Score = 61.2 bits (146), Expect = 1e-11
 Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 1/36 (2%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGN 107
           ++VTGGAG+IGS+    L       + +VDNL  G 
Sbjct: 2   IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGT 37

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

 Score = 57.1 bits (136), Expect = 3e-10
 Identities = 11/59 (18%), Positives = 22/59 (37%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
           +L+ G  GYIG H A   L   +   ++   S  +  + K       +      ++  +
Sbjct: 6   ILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSI 64

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 55.6 bits (132), Expect = 7e-10
 Identities = 23/178 (12%), Positives = 44/178 (24%), Gaps = 12/178 (6%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           VLVTG +G  G     +L + S +      +                  G       D+ 
Sbjct: 6   VLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQ--------GKEKIGGEADVFIGDIT 57

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITS--NTLVVLESMARHGVDT 190
           DA   +   +    DA++   +     +   DP K         +     +       + 
Sbjct: 58  DAD--SINPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQ 115

Query: 191 LIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVLQCHRF 248
           +  +             +    P  P+N  G    +      +             R 
Sbjct: 116 IDAAKVAGVKHIVVVGSMGGTNPDHPLNKLGNGNILVWKRKAEQYLADSGTPYTIIRA 173

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 205

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.6 bits (130), Expect = 8e-10
 Identities = 22/135 (16%), Positives = 44/135 (32%), Gaps = 18/135 (13%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           + + G  G  G     + ++  Y VT++    R +                     AD+ 
Sbjct: 6   IAIFGATGQTGLTTLAQAVQAGYEVTVLV---RDSSRLPSEGPRPAHVVVGDVLQAADVD 62

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
              A          DAV+             + L     ++     ++ +M  HGVD ++
Sbjct: 63  KTVA--------GQDAVIVLLGTR-------NDLSPTTVMSEGARNIVAAMKAHGVDKVV 107

Query: 193 YSSTCATYGEPEKMP 207
             ++     +P K+P
Sbjct: 108 ACTSAFLLWDPTKVP 122

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

 Score = 53.6 bits (127), Expect = 4e-09
 Identities = 18/136 (13%), Positives = 38/136 (27%), Gaps = 14/136 (10%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           VL+ GG GYIG       +   +   ++      +      +   F + G  + I A L 
Sbjct: 6   VLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLG-AKLIEASLD 64

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
           D + +     +                           +     L ++E++   G     
Sbjct: 65  DHQRLVDALKQVDVVISALAG-------------GVLSHHILEQLKLVEAIKEAGNIKRF 111

Query: 193 YSSTCATYGEPEKMPI 208
             S      +  +  +
Sbjct: 112 LPSEFGMDPDIMEHAL 127

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.8 bits (121), Expect = 3e-08
 Identities = 33/140 (23%), Positives = 49/140 (35%), Gaps = 10/140 (7%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            LVTG A  IG   A  LL    +V +VD      +     L E F EP +  FI  D+ 
Sbjct: 6   ALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQF-EPQKTLFIQCDVA 64

Query: 133 DAKAVNKFFSE--NAFDAVMHFAAVAYVGESTLDPLKYYHNITSN---TLVVLESMARHG 187
           D + +   F +  + F  +      A V            N+ S    T + L+ M++  
Sbjct: 65  DQQQLRDTFRKVVDHFGRLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQN 124

Query: 188 VDT----LIYSSTCATYGEP 203
                  +  SS        
Sbjct: 125 GGEGGIIINMSSLAGLMPVA 144

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.8 bits (121), Expect = 3e-08
 Identities = 31/167 (18%), Positives = 49/167 (29%), Gaps = 5/167 (2%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEP--GRLQFIYAD 130
            +VTGGA  IG      LL+    V I          A   LQ   P     R+  I  +
Sbjct: 15  AIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCN 74

Query: 131 LGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDT 190
           + + + VN                V   G   L P     +I+S     +      G   
Sbjct: 75  IRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPA---EHISSKGWHAVLETNLTGTFY 131

Query: 191 LIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKN 237
           +  +   +   E     +    P     P       A   + + +K+
Sbjct: 132 MCKAVYSSWMKEHGGSIVNIIVPTKAGFPLAVHSGAARAGVYNLTKS 178

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 50.5 bits (120), Expect = 4e-08
 Identities = 20/91 (21%), Positives = 34/91 (37%), Gaps = 5/91 (5%)

Query: 53  QSPTFSSPSPFSQHEEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVK 112
             P    P   S   EG    LVTG    IG   A+ L +   +V +    +     A +
Sbjct: 4   AIPGPLGPQSASL--EGKV-ALVTGAGRGIGREMAMELGRRGCKVIVNY--ANSTESAEE 58

Query: 113 VLQELFPEPGRLQFIYADLGDAKAVNKFFSE 143
           V+  +         + A++G  + + + F E
Sbjct: 59  VVAAIKKNGSDAACVKANVGVVEDIVRMFEE 89

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 50.4 bits (120), Expect = 4e-08
 Identities = 12/71 (16%), Positives = 29/71 (40%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           V++TG +  IG   A+   ++   VTI    S       +++ +      ++  + AD+ 
Sbjct: 8   VIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVT 67

Query: 133 DAKAVNKFFSE 143
                ++  + 
Sbjct: 68  TEDGQDQIINS 78

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

 Score = 49.6 bits (118), Expect = 6e-08
 Identities = 29/161 (18%), Positives = 47/161 (29%), Gaps = 12/161 (7%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPG-RLQFIYADL 131
            LVTGG+  +G   A  L +    V +     R    A +  Q+L  + G        D+
Sbjct: 8   ALVTGGSRGLGFGIAQGLAEAGCSVVVAS---RNLEEASEAAQKLTEKYGVETMAFRCDV 64

Query: 132 GDAKAVNKFFSE-----NAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARH 186
            + + V K            D V++ A +     +   PL  +  +    L     + R 
Sbjct: 65  SNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCRE 124

Query: 187 GVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMA 227
                                +T E    P      A K  
Sbjct: 125 ---AFSLLRESDNPSIINIGSLTVEEVTMPNISAYAASKGG 162

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

 Score = 49.7 bits (118), Expect = 7e-08
 Identities = 16/72 (22%), Positives = 30/72 (41%), Gaps = 4/72 (5%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPG-RLQFIYADL 131
           ++VTGG   IG      +      V ++    R    AV+V +++  E G + +    D+
Sbjct: 12  IIVTGGNRGIGLAFTRAVAAAGANVAVIY---RSAADAVEVTEKVGKEFGVKTKAYQCDV 68

Query: 132 GDAKAVNKFFSE 143
            +   V K   +
Sbjct: 69  SNTDIVTKTIQQ 80

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

 Score = 49.7 bits (118), Expect = 7e-08
 Identities = 17/97 (17%), Positives = 32/97 (32%), Gaps = 9/97 (9%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            ++TGGAG IG   A   ++   +V I D          + +      P  + F++ D+ 
Sbjct: 9   AIITGGAGGIGETTAKLFVRYGAKVVIADI----ADDHGQKVCNNIGSPDVISFVHCDVT 64

Query: 133 DAKAVNKFFSENA-----FDAVMHFAAVAYVGESTLD 164
             + V              D +     V      ++ 
Sbjct: 65  KDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSIL 101

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

 Score = 49.6 bits (118), Expect = 8e-08
 Identities = 20/121 (16%), Positives = 41/121 (33%), Gaps = 9/121 (7%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            ++TGG   IG   A + +++  +V I       +    +   +    P ++QF   D  
Sbjct: 9   AIITGGTLGIGLAIATKFVEEGAKVMITGR----HSDVGEKAAKSVGTPDQIQFFQHDSS 64

Query: 133 DAKAVNKFFSE-----NAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHG 187
           D     K F            +++ A +A            +  + +  L  +    R G
Sbjct: 65  DEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLG 124

Query: 188 V 188
           +
Sbjct: 125 I 125

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

 Score = 49.4 bits (117), Expect = 8e-08
 Identities = 22/71 (30%), Positives = 29/71 (40%), Gaps = 3/71 (4%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            LVTG    IG   ALRL+KD + V I D     +  A  V  E+    G    +  D+ 
Sbjct: 4   ALVTGAGQGIGKAIALRLVKDGFAVAIAD---YNDATAKAVASEINQAGGHAVAVKVDVS 60

Query: 133 DAKAVNKFFSE 143
           D   V     +
Sbjct: 61  DRDQVFAAVEQ 71

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

 Score = 49.0 bits (116), Expect = 1e-07
 Identities = 27/155 (17%), Positives = 48/155 (30%), Gaps = 6/155 (3%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            LVTG  G IG   ALRL ++   + ++D          K    +  +    +    D+ 
Sbjct: 8   CLVTGAGGNIGLATALRLAEEGTAIALLD---MNREALEKAEASVREKGVEARSYVCDVT 64

Query: 133 DAKAVNKFFSE--NAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDT 190
             +AV          F  +      A    +      Y  +  +  L +  + A H +  
Sbjct: 65  SEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKA 124

Query: 191 LIYSSTCATYGEPEKMP-ITEETPQAPINPYGKAK 224
           +        YG       +        +  YG +K
Sbjct: 125 VSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSK 159

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 49.2 bits (117), Expect = 1e-07
 Identities = 14/92 (15%), Positives = 32/92 (34%), Gaps = 5/92 (5%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            ++TG +  IG   A+   ++  +VTI    +       + +         +  + AD+ 
Sbjct: 8   AIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVT 67

Query: 133 DAKAVNKFFSE-----NAFDAVMHFAAVAYVG 159
                ++  S         D +++ A  A   
Sbjct: 68  TDAGQDEILSTTLGKFGKLDILVNNAGAAIPD 99

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

 Score = 48.8 bits (116), Expect = 1e-07
 Identities = 22/150 (14%), Positives = 41/150 (27%), Gaps = 18/150 (12%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            LVTGG+  IG      L      V       R        L +   +  +++    DL 
Sbjct: 11  ALVTGGSRGIGYGIVEELASLGASVYTCS---RNQKELNDCLTQWRSKGFKVEASVCDLS 67

Query: 133 DAKAVNKFFSE------NAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTL--------- 177
                 +  +          + +++ A +    E+    ++ Y  I S            
Sbjct: 68  SRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVL 127

Query: 178 VVLESMARHGVDTLIYSSTCATYGEPEKMP 207
                 A    + +  SS       P +  
Sbjct: 128 AHPFLKASERGNVVFISSVSGALAVPYEAV 157

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

 Score = 48.6 bits (115), Expect = 2e-07
 Identities = 19/71 (26%), Positives = 25/71 (35%), Gaps = 3/71 (4%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            LVTG    IG   A RL K+  RV +     RG  G    L+EL            D+ 
Sbjct: 5   ALVTGATSGIGLEIARRLGKEGLRVFVCA---RGEEGLRTTLKELREAGVEADGRTCDVR 61

Query: 133 DAKAVNKFFSE 143
               +    + 
Sbjct: 62  SVPEIEALVAA 72

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Length = 350

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

 Score = 48.9 bits (115), Expect = 2e-07
 Identities = 16/135 (11%), Positives = 39/135 (28%), Gaps = 19/135 (14%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           + V G  G  G+          + V         ++  +   +EL   P  +      L 
Sbjct: 6   IAVVGATGRQGASLIRVAAAVGHHVRA---QVH-SLKGLI-AEELQAIPN-VTLFQGPLL 59

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
           +   +         D +   A +A++  ++        +  +    + ++  R G     
Sbjct: 60  NNVPL--------MDTLFEGAHLAFINTTS-----QAGDEIAIGKDLADAAKRAGTIQHY 106

Query: 193 YSSTCATYGEPEKMP 207
             S+   +      P
Sbjct: 107 IYSSMPDHSLYGPWP 121

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 48.1 bits (114), Expect = 2e-07
 Identities = 14/71 (19%), Positives = 30/71 (42%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           V++TG +  IG  AA+   K+  +VTI            + + +      ++  + AD+ 
Sbjct: 7   VIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVT 66

Query: 133 DAKAVNKFFSE 143
           +A   +   + 
Sbjct: 67  EASGQDDIINT 77

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} Length = 294

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

 Score = 48.2 bits (114), Expect = 2e-07
 Identities = 16/100 (16%), Positives = 30/100 (30%), Gaps = 4/100 (4%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPG-RLQFIYADL 131
             +TGG   +G      L     +  I     R         +++  + G ++  I  D+
Sbjct: 28  AFITGGGTGLGKGMTTLLSSLGAQCVIAS---RKMDVLKATAEQISSQTGNKVHAIQCDV 84

Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHN 171
            D   V    SE    A      +     + + P +    
Sbjct: 85  RDPDMVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSP 124

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 48.1 bits (114), Expect = 2e-07
 Identities = 22/88 (25%), Positives = 33/88 (37%), Gaps = 8/88 (9%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            LVTG    IG      L     +V  V    R N   V + +E       ++ +  DLG
Sbjct: 8   ALVTGAGKGIGRDTVKALHASGAKVVAVT---RTNSDLVSLAKEC----PGIEPVCVDLG 60

Query: 133 DAKAVNKFFSE-NAFDAVMHFAAVAYVG 159
           D  A  K        D +++ AA+  + 
Sbjct: 61  DWDATEKALGGIGPVDLLVNNAALVIMQ 88

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 47.8 bits (113), Expect = 3e-07
 Identities = 28/144 (19%), Positives = 44/144 (30%), Gaps = 15/144 (10%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            L TG    IG   A+ L +    V +    S     A +V+ EL     +   I AD+ 
Sbjct: 9   ALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSK--AAEEVVAELKKLGAQGVAIQADIS 66

Query: 133 DAKAVNKFFSE-----NAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLV--------V 179
               V   F +        D VM  + +    +      + +  + +             
Sbjct: 67  KPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQG 126

Query: 180 LESMARHGVDTLIYSSTCATYGEP 203
           L+   R G   L  S      G P
Sbjct: 127 LKHCRRGGRIILTSSIAAVMTGIP 150

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 47.7 bits (113), Expect = 3e-07
 Identities = 14/69 (20%), Positives = 22/69 (31%), Gaps = 3/69 (4%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            LVTG    IG   A  L K    V  +    R       V+ E+            D+ 
Sbjct: 13  ALVTGAGRGIGREIAKMLAKSVSHVICIS---RTQKSCDSVVDEIKSFGYESSGYAGDVS 69

Query: 133 DAKAVNKFF 141
             + +++  
Sbjct: 70  KKEEISEVI 78

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

 Score = 47.8 bits (113), Expect = 3e-07
 Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 1/71 (1%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           VL+TGG   +G   A+RL  +  ++++VD  S G   +   + E  P+   +    AD+ 
Sbjct: 7   VLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPD-AEVLTTVADVS 65

Query: 133 DAKAVNKFFSE 143
           D   V  + + 
Sbjct: 66  DEAQVEAYVTA 76

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

 Score = 47.8 bits (113), Expect = 3e-07
 Identities = 15/71 (21%), Positives = 22/71 (30%), Gaps = 3/71 (4%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            LVTGG+  IG      L     RV       R      + L+    +   ++    DL 
Sbjct: 9   ALVTGGSKGIGYAIVEELAGLGARVYTCS---RNEKELDECLEIWREKGLNVEGSVCDLL 65

Query: 133 DAKAVNKFFSE 143
                +K    
Sbjct: 66  SRTERDKLMQT 76

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score = 47.7 bits (113), Expect = 3e-07
 Identities = 22/150 (14%), Positives = 46/150 (30%), Gaps = 19/150 (12%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            LVTGGA  +G      LL +  +V   D          ++  EL     R  F+  D+ 
Sbjct: 9   ALVTGGASGVGLEVVKLLLGEGAKVAFSD---INEAAGQQLAAEL---GERSMFVRHDVS 62

Query: 133 DAKAVNKFFSE-----NAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTL--------VV 179
                    +         + +++ A +   G+     L+ +  +               
Sbjct: 63  SEADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQG 122

Query: 180 LESMARHGVDTLIYSSTCATYGEPEKMPIT 209
           + +M   G   +  +S  +     +    +
Sbjct: 123 IAAMKETGGSIINMASVSSWLPIEQYAGYS 152

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

 Score = 47.3 bits (112), Expect = 4e-07
 Identities = 14/98 (14%), Positives = 29/98 (29%), Gaps = 8/98 (8%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            ++TG    IG   A+        V + D        A  V+ E+    G+      D+ 
Sbjct: 14  AIITGAGAGIGKEIAITFATAGASVVVSD---INADAANHVVDEIQQLGGQAFACRCDIT 70

Query: 133 DAKAVNKFFSE-----NAFDAVMHFAAVAYVGESTLDP 165
             + ++             D +++ A         +  
Sbjct: 71  SEQELSALADFAISKLGKVDILVNNAGGGGPKPFDMPM 108

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

 Score = 47.0 bits (111), Expect = 4e-07
 Identities = 33/130 (25%), Positives = 49/130 (37%), Gaps = 11/130 (8%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           +LVTG A  IG  A     ++   +  VD   R      + +  L         + AD+ 
Sbjct: 8   ILVTGAASGIGRAALDLFAREGASLVAVD---REERLLAEAVAAL---EAEAIAVVADVS 61

Query: 133 DAKAVNKFFSE-----NAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHG 187
           D KAV   F+E          V HFA VA+   S   PL+ +  +    L     +AR  
Sbjct: 62  DPKAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKA 121

Query: 188 VDTLIYSSTC 197
            + L    + 
Sbjct: 122 GEVLEEGGSL 131

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.3 bits (112), Expect = 4e-07
 Identities = 29/146 (19%), Positives = 48/146 (32%), Gaps = 17/146 (11%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           VLVTG    IG      L     RV  V             L  L  E   ++ +  DLG
Sbjct: 10  VLVTGAGKGIGRGTVQALHATGARVVAVSR-------TQADLDSLVRECPGIEPVCVDLG 62

Query: 133 DAKAVNKFFSE-NAFDAVMHFAAVAYVGE-STLDPLKYYHNITSNT--------LVVLES 182
           D +A  +        D +++ AAVA +     +    +  +   N         +V    
Sbjct: 63  DWEATERALGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGL 122

Query: 183 MARHGVDTLIYSSTCATYGEPEKMPI 208
           +AR     ++  S+  +        +
Sbjct: 123 IARGVPGAIVNVSSQCSQRAVTNHSV 148

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} Length = 261

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

 Score = 47.0 bits (111), Expect = 5e-07
 Identities = 14/71 (19%), Positives = 26/71 (36%), Gaps = 2/71 (2%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           V++TG +  +G   A+R   +  +V +          A  VL+E+    G    +  D+ 
Sbjct: 10  VVITGSSTGLGKSMAIRFATEKAKVVVNYR--SKEDEANSVLEEIKKVGGEAIAVKGDVT 67

Query: 133 DAKAVNKFFSE 143
               V      
Sbjct: 68  VESDVINLVQS 78

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score = 47.0 bits (111), Expect = 5e-07
 Identities = 17/69 (24%), Positives = 28/69 (40%), Gaps = 2/69 (2%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           V+VTG +  IG   AL L K   +V +    +R    A +V +++    G+      D+ 
Sbjct: 4   VVVTGASRGIGKAIALSLGKAGCKVLVNY--ARSAKAAEEVSKQIEAYGGQAITFGGDVS 61

Query: 133 DAKAVNKFF 141
               V    
Sbjct: 62  KEADVEAMM 70

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.8 bits (111), Expect = 6e-07
 Identities = 23/92 (25%), Positives = 38/92 (41%), Gaps = 6/92 (6%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            LVTG +G IG+  A  L++   +V      + GNI  +    +    PG L     DL 
Sbjct: 13  ALVTGASGGIGAAVARALVQQGLKVVGCA-RTVGNIEELAAECKSAGYPGTLIPYRCDLS 71

Query: 133 DAKAVNKFFSE-----NAFDAVMHFAAVAYVG 159
           + + +   FS      +  D  ++ A +A   
Sbjct: 72  NEEDILSMFSAIRSQHSGVDICINNAGLARPD 103

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

 Score = 46.5 bits (110), Expect = 8e-07
 Identities = 17/119 (14%), Positives = 46/119 (38%), Gaps = 11/119 (9%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           V++TGGA  +G+ AA + +    RV + D     +       +EL       ++ + D+ 
Sbjct: 8   VIITGGARGLGAEAARQAVAAGARVVLAD---VLDEEGAATAREL---GDAARYQHLDVT 61

Query: 133 DAKAVNKFFSE-----NAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARH 186
             +   +  +       + D +++ A ++       + ++ +  +    L  +    + 
Sbjct: 62  IEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKT 120

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.1 bits (109), Expect = 9e-07
 Identities = 28/143 (19%), Positives = 43/143 (30%), Gaps = 21/143 (14%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           V+VTGG   IG+      +    RV I D             + L  E     FI  D+ 
Sbjct: 9   VVVTGGGRGIGAGIVRAFVNSGARVVICDK-------DESGGRALEQELPGAVFILCDVT 61

Query: 133 DAKAVNKFFSE-----NAFDAVMHFAAVAYVGEST--LDPLKYYHNITSN-------TLV 178
               V    SE        D V++ A      +         +   +  N       T +
Sbjct: 62  QEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKL 121

Query: 179 VLESMARHGVDTLIYSSTCATYG 201
            L  + +   + +  SS     G
Sbjct: 122 ALPYLRKSQGNVINISSLVGAIG 144

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 46.2 bits (109), Expect = 1e-06
 Identities = 12/71 (16%), Positives = 18/71 (25%), Gaps = 3/71 (4%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           VLVTGG   IG             +       R      + L +   +  ++     D  
Sbjct: 11  VLVTGGTKGIGHAIVEEFAGFGAVIHTCA---RNEYELNECLSKWQKKGFQVTGSVCDAS 67

Query: 133 DAKAVNKFFSE 143
                 K    
Sbjct: 68  LRPEREKLMQT 78

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

 Score = 45.8 bits (108), Expect = 2e-06
 Identities = 19/149 (12%), Positives = 47/149 (31%), Gaps = 24/149 (16%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           VL+TGGA  +G     R + +  +V ++D   +      ++  +       +  I  D+ 
Sbjct: 8   VLITGGASGLGRALVDRFVAEGAKVAVLD---KSAERLAELETDH---GDNVLGIVGDVR 61

Query: 133 DAKAVNKFFSE-----NAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLV--------- 178
             +   +  S         D ++  A +     + +D  +   +   + +          
Sbjct: 62  SLEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIH 121

Query: 179 ----VLESMARHGVDTLIYSSTCATYGEP 203
                L ++     + +   S    Y   
Sbjct: 122 AVKACLPALVASRGNVIFTISNAGFYPNG 150

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} Length = 247

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

 Score = 45.6 bits (108), Expect = 2e-06
 Identities = 19/92 (20%), Positives = 36/92 (39%), Gaps = 10/92 (10%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            ++TGGA  IG   A R   +   + I D +      A   ++ L     R+  +  D+ 
Sbjct: 8   AVITGGANGIGRAIAERFAVEGADIAIADLVPAP--EAEAAIRNL---GRRVLTVKCDVS 62

Query: 133 DAKAVNKFFSE--NAF---DAVMHFAAVAYVG 159
               V  F  +  + F   D +++ A +  + 
Sbjct: 63  QPGDVEAFGKQVISTFGRCDILVNNAGIYPLI 94

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.6 bits (105), Expect = 3e-06
 Identities = 14/92 (15%), Positives = 29/92 (31%), Gaps = 8/92 (8%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           VL+TG    IG   A    K   ++ + D       G  +   +      ++     D  
Sbjct: 10  VLITGAGHGIGRLTAYEFAKLKSKLVLWD---INKHGLEETAAKCKGLGAKVHTFVVDCS 66

Query: 133 DAKAVNKFFSENA-----FDAVMHFAAVAYVG 159
           + + +     +          +++ A V Y  
Sbjct: 67  NREDIYSSAKKVKAEIGDVSILVNNAGVVYTS 98

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

 Score = 44.4 bits (104), Expect = 4e-06
 Identities = 17/71 (23%), Positives = 28/71 (39%), Gaps = 6/71 (8%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            L+TG A  IG   A   +++  RV I D        A     E+         I  D+ 
Sbjct: 8   ALITGSARGIGRAFAEAYVREGARVAIAD---INLEAARATAAEI---GPAACAIALDVT 61

Query: 133 DAKAVNKFFSE 143
           D  ++++  +E
Sbjct: 62  DQASIDRCVAE 72

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

 Score = 44.4 bits (104), Expect = 4e-06
 Identities = 16/72 (22%), Positives = 24/72 (33%), Gaps = 3/72 (4%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPG-RLQFIYADL 131
            +VTG    IG   A  L      + +            KV   L  + G ++ +  ADL
Sbjct: 7   AVVTGSTSGIGLGIATALAAQGADIVLNGF--GDAAEIEKVRAGLAAQHGVKVLYDGADL 64

Query: 132 GDAKAVNKFFSE 143
              +AV      
Sbjct: 65  SKGEAVRGLVDN 76

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 44.3 bits (104), Expect = 4e-06
 Identities = 15/105 (14%), Positives = 35/105 (33%), Gaps = 11/105 (10%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            LV+GGA  +G+     ++ +  +V   D     +     +  EL       ++++ D+ 
Sbjct: 9   ALVSGGARGMGASHVRAMVAEGAKVVFGD---ILDEEGKAMAAEL---ADAARYVHLDVT 62

Query: 133 DAKAVNKFFSE-----NAFDAVMHFAAVAYVGESTLDPLKYYHNI 172
                                +++ A +  +G      L  +  I
Sbjct: 63  QPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRI 107

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} Length = 240

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

 Score = 44.0 bits (103), Expect = 6e-06
 Identities = 17/75 (22%), Positives = 27/75 (36%), Gaps = 4/75 (5%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRV----TIVDNLSRGNIGAVKVLQELFPEPGRLQFIY 128
           +L+TG    IG   AL   + +        ++   SR      K+  E   E      I 
Sbjct: 4   LLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTIT 63

Query: 129 ADLGDAKAVNKFFSE 143
           AD+ D   V +  + 
Sbjct: 64  ADISDMADVRRLTTH 78

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

 Score = 42.9 bits (101), Expect = 1e-05
 Identities = 25/92 (27%), Positives = 37/92 (40%), Gaps = 14/92 (15%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           VLVTGGA  IG   A    ++   V + D          +V + +        F   DL 
Sbjct: 8   VLVTGGARGIGRAIAQAFAREGALVALCDL----RPEGKEVAEAI-----GGAFFQVDLE 58

Query: 133 DAKAVNKFFSE--NAF---DAVMHFAAVAYVG 159
           D +   +F  E   A    D +++ AA+A  G
Sbjct: 59  DERERVRFVEEAAYALGRVDVLVNNAAIAAPG 90

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 237

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 42.8 bits (100), Expect = 1e-05
 Identities = 21/71 (29%), Positives = 30/71 (42%), Gaps = 14/71 (19%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           VLVTGG   IG   A RL  D ++V +    S                P  L  +  D+ 
Sbjct: 10  VLVTGGNRGIGLAIAQRLAADGHKVAVTHRGS--------------GAPKGLFGVEVDVT 55

Query: 133 DAKAVNKFFSE 143
           D+ AV++ F+ 
Sbjct: 56  DSDAVDRAFTA 66

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

 Score = 42.3 bits (99), Expect = 2e-05
 Identities = 23/142 (16%), Positives = 48/142 (33%), Gaps = 21/142 (14%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           VL+TG A  IG        K+  R+   D          +  + +         +  D+ 
Sbjct: 8   VLITGAAHGIGRATLELFAKEGARLVACD---IEEGPLREAAEAV-----GAHPVVMDVA 59

Query: 133 DAKAVNKFFSE-----NAFDAVMHFAAVAYVG---ESTLDPLKYYHNITSN-----TLVV 179
           D  +V + F+E        D V+H+A +       +  L+  +    +            
Sbjct: 60  DPASVERGFAEALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAA 119

Query: 180 LESMARHGVDTLIYSSTCATYG 201
            E+M      +++ +++    G
Sbjct: 120 SEAMREKNPGSIVLTASRVYLG 141

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 42.1 bits (97), Expect = 2e-05
 Identities = 8/29 (27%), Positives = 13/29 (44%)

Query: 72  HVLVTGGAGYIGSHAALRLLKDSYRVTIV 100
            VL+ G  G  G H   R+L +     ++
Sbjct: 4   RVLLAGATGLTGEHLLDRILSEPTLAKVI 32

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 41.8 bits (97), Expect = 3e-05
 Identities = 18/100 (18%), Positives = 40/100 (40%), Gaps = 11/100 (11%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           V+VTG    IG     +L+KD     I+   +R ++     L+ +  +  R+  +   + 
Sbjct: 6   VVVTGANRGIGLGLVQQLVKDKNIRHIIA-TAR-DVEKATELKSI--KDSRVHVLPLTVT 61

Query: 133 DAKAVNKF-------FSENAFDAVMHFAAVAYVGESTLDP 165
             K+++ F          +    +++ A V     +  +P
Sbjct: 62  CDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEP 101

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 302

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 41.5 bits (97), Expect = 4e-05
 Identities = 22/95 (23%), Positives = 39/95 (41%), Gaps = 8/95 (8%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVD------NLSRGNIGAVKVLQELFPEPGRLQF 126
           VLVTG  G +G   AL   +    V + D       + +G+  A KV++E+    G+   
Sbjct: 10  VLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVA 69

Query: 127 IYADLGDAKAVNKFFSEN--AFDAVMHFAAVAYVG 159
            Y  +   + + K   +     D V++ A +    
Sbjct: 70  NYDSVEAGEKLVKTALDTFGRIDVVVNNAGILRDR 104

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

 Score = 41.2 bits (96), Expect = 5e-05
 Identities = 16/97 (16%), Positives = 30/97 (30%), Gaps = 14/97 (14%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            +VT    + G  +ALRL +  + V   D        + K   EL  E     +      
Sbjct: 3   AIVTNVKHFGGMGSALRLSEAGHTVACHDE-------SFKQKDEL--EAFAETYPQLKPM 53

Query: 133 DAKAVNKFFSE--NAF---DAVMHFAAVAYVGESTLD 164
             +   +      +A+   D ++     A   +    
Sbjct: 54  SEQEPAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDK 90

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.0 bits (95), Expect = 6e-05
 Identities = 32/146 (21%), Positives = 48/146 (32%), Gaps = 15/146 (10%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSR---GNIGAVKVLQELFPEPGRLQFIYA 129
           VL+TG +  IG H A+RL  D  +   V    R         +  + L   PG L+ +  
Sbjct: 5   VLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQL 64

Query: 130 DLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYY--------HNITSNTLV--- 178
           D+ D+K+V           V      A +G                   N+     +   
Sbjct: 65  DVRDSKSVAAARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQA 124

Query: 179 VLESMARHGVDTLIY-SSTCATYGEP 203
            L  M R G   ++   S     G P
Sbjct: 125 FLPDMKRRGSGRVLVTGSVGGLMGLP 150

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 275

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.6 bits (94), Expect = 8e-05
 Identities = 28/181 (15%), Positives = 57/181 (31%), Gaps = 18/181 (9%)

Query: 73  VLVTGGAGYIGSHAALRLLKDS-YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
            LVTGG   IG      L +     V +     R        +Q+L  E    +F   D+
Sbjct: 6   ALVTGGNKGIGLAIVRDLCRLFSGDVVLTA---RDVTRGQAAVQQLQAEGLSPRFHQLDI 62

Query: 132 GDAKAVNKFFS-----ENAFDAVMHFAAVAYVGES-TLDPLKYYHNITSN-------TLV 178
            D +++              D +++ A +A+     T   ++    + +N          
Sbjct: 63  DDLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTE 122

Query: 179 VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNS 238
           +L  +   G    + SS  +        P  ++  ++      +   +    + D  K  
Sbjct: 123 LLPLIKPQGRVVNV-SSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTKKGV 181

Query: 239 D 239
            
Sbjct: 182 H 182

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

 Score = 40.4 bits (94), Expect = 9e-05
 Identities = 12/72 (16%), Positives = 26/72 (36%), Gaps = 1/72 (1%)

Query: 72  HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
           +V+     G IG   +  L+K + +  ++ +    N  A+  L+ + P+       Y   
Sbjct: 7   NVIFVAALGGIGLDTSRELVKRNLKNFVILDRVE-NPTALAELKAINPKVNITFHTYDVT 65

Query: 132 GDAKAVNKFFSE 143
                  K   +
Sbjct: 66  VPVAESKKLLKK 77

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} Length = 232

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.1 bits (92), Expect = 1e-04
 Identities = 5/28 (17%), Positives = 10/28 (35%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIV 100
           V + G +G  G      +L+      + 
Sbjct: 17  VFILGASGETGRVLLKEILEQGLFSKVT 44

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 236

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 39.8 bits (92), Expect = 1e-04
 Identities = 17/81 (20%), Positives = 30/81 (37%), Gaps = 6/81 (7%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           VLV GG G +GS         ++ V  +D +      A  +++       +   + A   
Sbjct: 5   VLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEASASVIVKMTDSFTEQADQVTA--- 61

Query: 133 DAKAVNKFFSENAFDAVMHFA 153
               V K   +   DA++  A
Sbjct: 62  ---EVGKLLGDQKVDAILCVA 79

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} Length = 266

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

 Score = 39.1 bits (90), Expect = 2e-04
 Identities = 21/79 (26%), Positives = 34/79 (43%), Gaps = 4/79 (5%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPE-PGRLQFIYADL 131
            ++TGGA  IG   A+RL +  +RV +    S G   A +++ EL     G       DL
Sbjct: 4   AVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEG--AAQRLVAELNAARAGSAVLCKGDL 61

Query: 132 GDAKAVNKFFSENAFDAVM 150
             + ++     E+  D   
Sbjct: 62  SLSSSLLDCC-EDIIDCSF 79

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 38.2 bits (88), Expect = 4e-04
 Identities = 14/88 (15%), Positives = 31/88 (35%), Gaps = 2/88 (2%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEP--GRLQFIYAD 130
            ++TG +   G   A +L +     +++   +R      ++ +EL  +    ++    AD
Sbjct: 9   CVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAAD 68

Query: 131 LGDAKAVNKFFSENAFDAVMHFAAVAYV 158
           LG    V +  S               +
Sbjct: 69  LGTEAGVQRLLSAVRELPRPEGLQRLLL 96

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 235

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 37.9 bits (87), Expect = 5e-04
 Identities = 11/29 (37%), Positives = 15/29 (51%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVD 101
           V+V GG G +GS       K+ Y V  +D
Sbjct: 5   VIVYGGKGALGSAILEFFKKNGYTVLNID 33

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score = 37.2 bits (85), Expect = 9e-04
 Identities = 17/88 (19%), Positives = 34/88 (38%), Gaps = 14/88 (15%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           ++++G A  IG+     L    +++  +D      I   +V+ +L    GR Q I     
Sbjct: 4   IVISGCATGIGAATRKVLEAAGHQIVGID------IRDAEVIADLSTAEGRKQAI----- 52

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGE 160
            A  + K       D ++  A +    +
Sbjct: 53  -ADVLAKCS--KGMDGLVLCAGLGPQTK 77

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

 Score = 37.1 bits (85), Expect = 0.001
 Identities = 21/80 (26%), Positives = 32/80 (40%), Gaps = 15/80 (18%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            LVTGGA  +G  AAL L    YRV ++D               L  E   L ++  D+ 
Sbjct: 4   ALVTGGASGLGRAAALALKARGYRVVVLD---------------LRREGEDLIYVEGDVT 48

Query: 133 DAKAVNKFFSENAFDAVMHF 152
             + V +  +    +A +  
Sbjct: 49  REEDVRRAVARAQEEAPLFA 68

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} Length = 243

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

 Score = 37.0 bits (85), Expect = 0.001
 Identities = 13/69 (18%), Positives = 22/69 (31%), Gaps = 6/69 (8%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            LVTG +  IG   A  L     +V           GA  +   L       + +  ++ 
Sbjct: 7   ALVTGASRGIGRAIAETLAARGAKVIGTA---TSENGAQAISDYL---GANGKGLMLNVT 60

Query: 133 DAKAVNKFF 141
           D  ++    
Sbjct: 61  DPASIESVL 69

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.0 bits (85), Expect = 0.001
 Identities = 22/145 (15%), Positives = 40/145 (27%), Gaps = 17/145 (11%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPG-RLQFIYADL 131
           V+VTG +  IG   A  L K    V +     R      KV+            +I   +
Sbjct: 17  VIVTGASKGIGREMAYHLAKMGAHVVVTA---RSKETLQKVVSHCLELGAASAHYIAGTM 73

Query: 132 GDAKAVNKFFSE-----NAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLV-------- 178
            D     +F ++        D ++             D + +         +        
Sbjct: 74  EDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVA 133

Query: 179 VLESMARHGVDTLIYSSTCATYGEP 203
            L  + +     ++ SS       P
Sbjct: 134 ALPMLKQSNGSIVVVSSLAGKVAYP 158

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

 Score = 36.9 bits (84), Expect = 0.001
 Identities = 20/81 (24%), Positives = 34/81 (41%), Gaps = 1/81 (1%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNI-GAVKVLQELFPEPGRLQFIYADL 131
           VLVTGG G +G   A  L +      ++ + S  +  GA +++ EL     R      D+
Sbjct: 12  VLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDV 71

Query: 132 GDAKAVNKFFSENAFDAVMHF 152
            D ++V +       D  +  
Sbjct: 72  TDRESVRELLGGIGDDVPLSA 92

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

 Score = 36.8 bits (84), Expect = 0.001
 Identities = 17/101 (16%), Positives = 35/101 (34%), Gaps = 6/101 (5%)

Query: 73  VLVTGGAGY--IGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYAD 130
           +LVTG A    I    A  + ++   +         N      ++E   + G    +  D
Sbjct: 8   ILVTGVASKLSIAYGIAQAMHREGAELAFTYQ----NDKLKGRVEEFAAQLGSDIVLQCD 63

Query: 131 LGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHN 171
           + +  +++  F+E           V  +G +  D L   + 
Sbjct: 64  VAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYV 104

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.4 bits (83), Expect = 0.002
 Identities = 9/29 (31%), Positives = 15/29 (51%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVD 101
            ++TGGA  +G   A RL+       ++D
Sbjct: 8   AVITGGASGLGLATAERLVGQGASAVLLD 36

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} Length = 234

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

 Score = 36.2 bits (83), Expect = 0.002
 Identities = 10/29 (34%), Positives = 13/29 (44%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVD 101
           VLV   +  IG   A  L ++   VTI  
Sbjct: 7   VLVLAASRGIGRAVADVLSQEGAEVTICA 35

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} Length = 245

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.2 bits (83), Expect = 0.002
 Identities = 9/29 (31%), Positives = 15/29 (51%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVD 101
           +++T  A  IG  AAL   ++  +V   D
Sbjct: 9   IILTAAAQGIGQAAALAFAREGAKVIATD 37

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} Length = 284

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

 Score = 36.2 bits (82), Expect = 0.002
 Identities = 17/92 (18%), Positives = 25/92 (27%), Gaps = 2/92 (2%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            LVTG A  +G   A  L  + Y V +  +  R    A  +   L               
Sbjct: 5   ALVTGAAKRLGRSIAEGLHAEGYAVCLHYH--RSAAEANALSATLNARRPNSAITVQADL 62

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLD 164
              A       +    V  F   A +  +   
Sbjct: 63  SNVATAPVSGADGSAPVTLFTRCAELVAACYT 94

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 36.2 bits (82), Expect = 0.002
 Identities = 15/72 (20%), Positives = 27/72 (37%), Gaps = 1/72 (1%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           +L+TG    +G      LL        +    R N    K L++L      +  +  DL 
Sbjct: 5   ILITGCNRGLGLGLVKALLNLPQPPQHLFTTCR-NREQAKELEDLAKNHSNIHILEIDLR 63

Query: 133 DAKAVNKFFSEN 144
           +  A +K  ++ 
Sbjct: 64  NFDAYDKLVADI 75

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

 Score = 36.0 bits (82), Expect = 0.002
 Identities = 13/75 (17%), Positives = 24/75 (32%), Gaps = 6/75 (8%)

Query: 73  VLVTGGAGY--IGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYAD 130
            LV G      +G   A +L +    V +     R         ++L    G      AD
Sbjct: 11  ALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAER----LRPEAEKLAEALGGALLFRAD 66

Query: 131 LGDAKAVNKFFSENA 145
           +   + ++  F+   
Sbjct: 67  VTQDEELDALFAGVK 81

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	248
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	99.98
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	99.97
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	99.97
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	99.97
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	99.97
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	99.97
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	99.97
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	99.97
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	99.97
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	99.97
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	99.97
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	99.97
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	99.96
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	99.96
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	99.96
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	99.96
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	99.96
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	99.96
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	99.96
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	99.96
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.96
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	99.96
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	99.96
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	99.96
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	99.96
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.96
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	99.96
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	99.96
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	99.96
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	99.96
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	99.96
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	99.96
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	99.96
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	99.96
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	99.96
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	99.96
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	99.95
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	99.95
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	99.95
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	99.95
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	99.95
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	99.95
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	99.95
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.95
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	99.95
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	99.95
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	99.94
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	99.94
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	99.94
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	99.94
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	99.94
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	99.94
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	99.94
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.94
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	99.94
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	99.94
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	99.94
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	99.94
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	99.94
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	99.93
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	99.93
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	99.93
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	99.93
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.93
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	99.93
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	99.93
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.93
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	99.92
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.92
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	99.92
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	99.92
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	99.91
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	99.9
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	99.9
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	99.9
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	99.9
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	99.89
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	99.89
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.89
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	99.87
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	99.86
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	99.85
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	99.85
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	99.84
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	99.84
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	99.83
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.83
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	99.81
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	99.8
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	99.77
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	99.77
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	99.73
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.72
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	99.67
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	99.65
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	99.64
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	99.51
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	98.24
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	98.21
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	98.15
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	98.15
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	98.11
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	98.1
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	98.02
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	98.0
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	97.99
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	97.97
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	97.96
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	97.94
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	97.92
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	97.87
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	97.85
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	97.83
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	97.82
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	97.78
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	97.78
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	97.76
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	97.76
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	97.75
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	97.67
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	97.65
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	97.65
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	97.64
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	97.59
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	97.58
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	97.57
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	97.56
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	97.5
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	97.48
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	97.47
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	97.45
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	97.44
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	97.39
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.37
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	97.37
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	97.36
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	97.34
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	97.34
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	97.27
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	97.26
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	97.25
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	97.14
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	97.13
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	97.07
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	97.06
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	97.02
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	96.98
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	96.97
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	96.97
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	96.96
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	96.96
d2g17a1	179	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	96.93
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	96.68
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	96.67
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	96.66
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	96.66
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	96.62
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	96.54
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	96.5
d1vkna1	176	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	96.45
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	96.43
d1mb4a1	147	Aspartate beta-semialdehyde dehydrogenase {Vibrio	96.36
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	96.21
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	96.14
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	96.12
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	96.08
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	96.04
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	96.01
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	95.98
d2hjsa1	144	Usg-1 protein homolog PA3116 {Pseudomonas aerugino	95.87
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	95.86
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	95.81
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	95.77
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	95.75
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	95.71
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	95.69
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	95.63
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	95.56
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	95.48
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	95.44
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	95.43
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	95.4
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	95.31
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	95.29
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	95.27
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	95.17
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	95.15
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.14
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	95.13
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	95.12
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	95.1
d2csua1	129	Acetate-CoA ligase alpha chain, AcdA, N-terminal d	95.06
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	95.05
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	95.01
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	95.01
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	95.01
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	94.81
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	94.8
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	94.64
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	94.6
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	94.58
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	94.57
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	94.43
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	94.38
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	94.23
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	94.2
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	94.17
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	94.16
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	94.11
d2cvoa1	183	Putative semialdehyde dehydrogenase {Rice (Oryza s	94.04
d1a9xa4	121	Carbamoyl phosphate synthetase (CPS), large subuni	94.03
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	93.96
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	93.91
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	93.91
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	93.85
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	93.82
d1p9oa_	290	Phosphopantothenoylcysteine synthetase {Human (Hom	93.67
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	93.64
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	93.59
d1gsoa2	105	Glycinamide ribonucleotide synthetase (GAR-syn), N	93.43
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	93.33
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	93.28
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	93.18
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	93.08
d2gz1a1	154	Aspartate beta-semialdehyde dehydrogenase {Strepto	93.07
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	93.06
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	93.03
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	92.98
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	92.83
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	92.71
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	92.68
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	92.44
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	92.41
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	92.3
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	92.28
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	92.2
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	91.98
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	91.84
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	91.79
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	91.77
d1i8ta1	298	UDP-galactopyranose mutase, N-terminal domain {Esc	91.46
d2blna2	203	Polymyxin resistance protein ArnA, N-terminal doma	91.41
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	91.33
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	91.28
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	91.28
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	90.97
d1gtma1	239	Glutamate dehydrogenase {Archaeon Pyrococcus furio	90.74
d1m6ya2	192	TM0872, methyltransferase domain {Thermotoga marit	90.69
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	90.68
d1hyqa_	232	Cell division regulator MinD {Archaeon Archaeoglob	90.59
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	90.52
d1cp2a_	269	Nitrogenase iron protein {Clostridium pasteurianum	90.41
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	90.33
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	90.29
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	90.2
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	90.19
d1byia_	224	Dethiobiotin synthetase {Escherichia coli [TaxId:	90.13
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	90.13
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	89.77
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	89.67
d1f0ka_	351	Peptidoglycan biosynthesis glycosyltransferase Mur	89.63
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	89.61
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	89.58
d1yova1	529	Amyloid beta precursor protein-binding protein 1,	89.29
d2as0a2	324	Hypothetical protein PH1915, middle and C-terminal	88.75
d1ydwa1	184	Probable oxidoreductase At4g09670 {Thale cress (Ar	88.64
d1jyea_	271	Lac-repressor (lacR) core (C-terminal domain) {Esc	88.55
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	88.49
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	88.45
d1ihua2	279	Arsenite-translocating ATPase ArsA {Escherichia co	88.37
d2gv8a1	335	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	88.27
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	88.18
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	88.04
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	87.88
d1obba1	171	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	87.77
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	87.5
d1feca2	117	Trypanothione reductase {Crithidia fasciculata [Ta	87.22
d2v5za1	383	Monoamine oxidase B {Human (Homo sapiens) [TaxId:	87.21
d1g3qa_	237	Cell division regulator MinD {Archaeon Pyrococcus	87.08
d1s6ya1	169	6-phospho-beta-glucosidase {Bacillus stearothermop	86.56
d2bisa1	437	Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI	86.09
d1yb2a1	250	Hypothetical protein Ta0852 {Thermoplasma acidophi	86.05
d1nvmb1	157	Acetaldehyde dehydrogenase (acylating) {Pseudomona	85.94
d1kifa1	246	D-aminoacid oxidase, N-terminal domain {Pig (Sus s	85.87
d2igta1	309	Putative methyltransferase Atu0340 {Agrobacterium	85.71
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	85.33
d1b7go1	178	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	85.19
d1n4wa1	367	Cholesterol oxidase of GMC family {Streptomyces sp	84.98
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	84.84
d1m6ia2	137	Apoptosis-inducing factor (AIF) {Human (Homo sapie	84.69
d1rzua_	477	Glycogen synthase 1, GlgA {Agrobacterium tumefacie	84.59
d1xhca1	167	NADH oxidase /nitrite reductase {Pyrococcus furios	84.5
d1xk7a1	402	Crotonobetainyl-CoA:carnitine CoA-transferase, Cai	84.47
d2afhe1	289	Nitrogenase iron protein {Azotobacter vinelandii [	84.45
d1y0pa2	308	Flavocytochrome c3 (respiratory fumarate reductase	84.35
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	83.96
d2csua3	163	Acetate-CoA ligase alpha chain, AcdA, domains 2 an	83.73
d3c96a1	288	Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId:	83.15
d1nhpa1	198	NADH peroxidase {Enterococcus faecalis [TaxId: 135	83.01
d1up7a1	162	6-phospho-beta-glucosidase {Thermotoga maritima [T	82.83
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	82.82
d2bw0a2	203	10-formyltetrahydrofolate dehydrogenase domain 1 {	82.48
d1vl5a_	231	Hypothetical protein BH2331 {Bacillus halodurans [	82.42
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	82.17
d1ve3a1	226	Hypothetical protein PH0226 {Archaeon Pyrococcus h	82.16
d1nv8a_	271	N5-glutamine methyltransferase, HemK {Thermotoga m	81.88
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	81.87
d1dusa_	194	Hypothetical protein MJ0882 {Archaeon Methanococcu	81.75
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	81.65
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	81.38
d2b78a2	317	Hypothetical protein SMu776, middle and C-terminal	81.33
d2nxca1	254	PrmA-like protein TTHA0656 (TT0836) {Thermus therm	81.01
d1rp0a1	278	Thiazole biosynthetic enzyme Thi4 {Thale cress(Ara	80.78
d1uwva2	358	rRNA (Uracil-5-)-methyltransferase RumA, catalytic	80.38
d1d4ca2	322	Flavocytochrome c3 (respiratory fumarate reductase	80.14

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=99.98  E-value=8.7e-32  Score=231.00  Aligned_cols=178  Identities=25%  Similarity=0.295  Sum_probs=147.5

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCC--cchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRG--NIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~  148 (248)
                      |+||||||||+||++++++|+++|++|++++|....  .........+......++.++++|++|.+++.++++...+|+
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~   81 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPDE   81 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCSE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhccCCCE
Confidence            789999999999999999999999999999975322  111111111111224579999999999999999998777899


Q ss_pred             EEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCC---CEEEEeccceecCCCCCCCCCCCCCCCCCChHHHHHH
Q 025786          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV---DTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKK  225 (248)
Q Consensus       149 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~---~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~  225 (248)
                      |||+|+.........+++.+++.|+.+|.++++++++.+.   .+||++||..+||.....+++|+++..|.++|+.||.
T Consensus        82 v~h~aa~~~~~~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS~~vYG~~~~~~~~E~~~~~P~~~Y~~sK~  161 (357)
T d1db3a_          82 VYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKL  161 (357)
T ss_dssp             EEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTTSCCCCCSHHHHHHH
T ss_pred             EEEeecccccchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEchhhhCCCCCCCcCCCCCCCCCChHHHHHH
Confidence            9999998776667778888999999999999999988653   4799999999999888889999999999999999999


Q ss_pred             HHHHHHHHHhhcCCCcEEEEecC
Q 025786          226 MAEDIILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       226 a~e~l~~~~~~~~gi~~~~v~Pf  248 (248)
                      ++|.+++.++++++++++++|||
T Consensus       162 ~~E~~~~~~~~~~~l~~~ilR~~  184 (357)
T d1db3a_         162 YAYWITVNYRESYGMYACNGILF  184 (357)
T ss_dssp             HHHHHHHHHHHHHCCCEEEEEEC
T ss_pred             HHHHHHHHHHHHhCCCEEEEEec
Confidence            99999999999999999999985

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=99.97  E-value=3.7e-30  Score=210.01  Aligned_cols=165  Identities=15%  Similarity=0.175  Sum_probs=132.7

Q ss_pred             CCCCceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc--
Q 025786           66 HEEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE--  143 (248)
Q Consensus        66 ~~~~~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--  143 (248)
                      ++++ |+++||||++|||+++|+.|+++|++|++++|+..  +...+.+++.   +.++.++++|++|++++++++++  
T Consensus         2 rL~g-KvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~--~~~~~~~~~~---g~~~~~~~~Dvs~~~~v~~~~~~~~   75 (247)
T d2ew8a1           2 RLKD-KLAVITGGANGIGRAIAERFAVEGADIAIADLVPA--PEAEAAIRNL---GRRVLTVKCDVSQPGDVEAFGKQVI   75 (247)
T ss_dssp             TTTT-CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCC--HHHHHHHHHT---TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCC-CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCch--HHHHHHHHHc---CCcEEEEEeeCCCHHHHHHHHHHHH
Confidence            3456 99999999999999999999999999999997432  2333333333   46789999999999999998876  


Q ss_pred             ---CCCCEEEEcccccccCCCCCCchhhHhhhHH----H----HHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCC
Q 025786          144 ---NAFDAVMHFAAVAYVGESTLDPLKYYHNITS----N----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEET  212 (248)
Q Consensus       144 ---~~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~----~----~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~  212 (248)
                         +++|+||||||+....+..+.+.+.|+..+.    +    ++.++|.|++++.++||++||.+..           .
T Consensus        76 ~~~G~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~~-----------~  144 (247)
T d2ew8a1          76 STFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYW-----------L  144 (247)
T ss_dssp             HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGG-----------S
T ss_pred             HHcCCCCEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchhc-----------c
Confidence               7899999999987666555555555554433    3    4558899998888899999998775           2


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          213 PQAPINPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       213 ~~~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      +.+...+|++||++.+.|++.++.|   +||++++|.|
T Consensus       145 ~~~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~P  182 (247)
T d2ew8a1         145 KIEAYTHYISTKAANIGFTRALASDLGKDGITVNAIAP  182 (247)
T ss_dssp             CCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE
T ss_pred             cCcccccchhhhccHHHHHHHHHHHhcccCeEEEEEee
Confidence            3445778999999999999999987   5899999998

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.97  E-value=4.6e-30  Score=209.92  Aligned_cols=165  Identities=15%  Similarity=0.117  Sum_probs=133.7

Q ss_pred             CCceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc----
Q 025786           68 EGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----  143 (248)
Q Consensus        68 ~~~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~----  143 (248)
                      .+ |++|||||++|||+++|+.|+++|++|++++|+..   .+.+..+++...+.++.++.+|++|++++++++++    
T Consensus         9 en-KvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~---~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~   84 (251)
T d2c07a1           9 EN-KVALVTGAGRGIGREIAKMLAKSVSHVICISRTQK---SCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTE   84 (251)
T ss_dssp             SS-CEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHH---HHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CC-CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHH---HHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHh
Confidence            44 99999999999999999999999999999996443   34444444444456899999999999999998876    


Q ss_pred             -CCCCEEEEcccccccCCCCCCchhhHhhhHHH--------HHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCC
Q 025786          144 -NAFDAVMHFAAVAYVGESTLDPLKYYHNITSN--------TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQ  214 (248)
Q Consensus       144 -~~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~--------~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~  214 (248)
                       +++|+||||||........+.+.+.|+..+..        ++.+++.|++++.++||++||.+.+-           +.
T Consensus        85 ~g~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~-----------~~  153 (251)
T d2c07a1          85 HKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLT-----------GN  153 (251)
T ss_dssp             CSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHH-----------CC
T ss_pred             cCCceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHhcC-----------CC
Confidence             79999999999876666555555555544433        45588889888889999999987752           33


Q ss_pred             CCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          215 APINPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       215 ~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      +...+|++||++.+.|++.++.|   +||++++|.|
T Consensus       154 ~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~V~P  189 (251)
T d2c07a1         154 VGQANYSSSKAGVIGFTKSLAKELASRNITVNAIAP  189 (251)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEcc
Confidence            44678999999999999999988   6899999998

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.97  E-value=1.3e-29  Score=206.27  Aligned_cols=163  Identities=17%  Similarity=0.214  Sum_probs=132.1

Q ss_pred             CCCceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc---
Q 025786           67 EEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE---  143 (248)
Q Consensus        67 ~~~~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~---  143 (248)
                      +.+ |+++||||++|||+++|+.|+++|++|++++|+.   +++.+..+++   ..++.++++|++|++++++++++   
T Consensus         4 L~g-K~alITGas~GIG~aia~~la~~G~~V~~~~r~~---~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~   76 (244)
T d1nffa_           4 LTG-KVALVSGGARGMGASHVRAMVAEGAKVVFGDILD---EEGKAMAAEL---ADAARYVHLDVTQPAQWKAAVDTAVT   76 (244)
T ss_dssp             TTT-CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH---HHHHHHHHHT---GGGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCC-CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH---HHHHHHHHHh---hCcceEEEeecCCHHHHHHHHHHHHH
Confidence            455 9999999999999999999999999999999643   3444444444   34688899999999999988876   


Q ss_pred             --CCCCEEEEcccccccCCCCCCchhhHhhhHH----H----HHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCC
Q 025786          144 --NAFDAVMHFAAVAYVGESTLDPLKYYHNITS----N----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETP  213 (248)
Q Consensus       144 --~~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~----~----~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~  213 (248)
                        +++|+||||||.....+..+.+.+.|+..+.    +    ++.+++.|++++.++||++||...+           .+
T Consensus        77 ~~g~idilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~-----------~~  145 (244)
T d1nffa_          77 AFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGL-----------AG  145 (244)
T ss_dssp             HHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT-----------SC
T ss_pred             HhCCCeEEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEeccccccc-----------cc
Confidence              7899999999987766666655565554433    3    4457888888888899999998775           23


Q ss_pred             CCCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          214 QAPINPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       214 ~~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      .+...+|+.||++.+.|++.++.|   +||++++|.|
T Consensus       146 ~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~P  182 (244)
T d1nffa_         146 TVACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHP  182 (244)
T ss_dssp             CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE
T ss_pred             cccccchhhHHHHHHHHHHHHHHHhcccCEEEEEEee
Confidence            444678999999999999999988   6899999998

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=99.97  E-value=5.5e-30  Score=210.59  Aligned_cols=166  Identities=16%  Similarity=0.122  Sum_probs=131.0

Q ss_pred             CCceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCC-CcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc---
Q 025786           68 EGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSR-GNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE---  143 (248)
Q Consensus        68 ~~~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~---  143 (248)
                      ++ |++|||||++|||+++|++|+++|++|++++|+.. ..++..+.+.+.  .+.++.++++|++|++++++++++   
T Consensus         3 ~g-K~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~--~g~~~~~~~~Dv~~~~~v~~~~~~~~~   79 (260)
T d1x1ta1           3 KG-KVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQ--HGVKVLYDGADLSKGEAVRGLVDNAVR   79 (260)
T ss_dssp             TT-CEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHH--HTSCEEEECCCTTSHHHHHHHHHHHHH
T ss_pred             Cc-CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHh--cCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            44 99999999999999999999999999999997432 122222222221  145788999999999999998876   


Q ss_pred             --CCCCEEEEcccccccCCCCCCchhhHhhhHH----H----HHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCC
Q 025786          144 --NAFDAVMHFAAVAYVGESTLDPLKYYHNITS----N----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETP  213 (248)
Q Consensus       144 --~~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~----~----~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~  213 (248)
                        +++|+||||||+....+..+.+.+.|+..+.    +    ++.++|.|++++.++||++||.+..           .+
T Consensus        80 ~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~-----------~~  148 (260)
T d1x1ta1          80 QMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGL-----------VA  148 (260)
T ss_dssp             HHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT-----------SC
T ss_pred             HhCCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccccce-----------ec
Confidence              7899999999987666655555555554433    3    4558999998888899999998775           23


Q ss_pred             CCCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          214 QAPINPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       214 ~~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      .+...+|+.||++.+.|++.++.|   +||++++|.|
T Consensus       149 ~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~P  185 (260)
T d1x1ta1         149 SANKSAYVAAKHGVVGFTKVTALETAGQGITANAICP  185 (260)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEE
T ss_pred             cCCcchhhhhhhhHHHhHHHHHHHhchhCcEEEEEec
Confidence            445778999999999999999988   6899999998

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=99.97  E-value=1.1e-29  Score=208.47  Aligned_cols=168  Identities=16%  Similarity=0.180  Sum_probs=130.9

Q ss_pred             CCCceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc---
Q 025786           67 EEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE---  143 (248)
Q Consensus        67 ~~~~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~---  143 (248)
                      +.+ |++|||||++|||+++++.|+++|++|++++|+....++..+.+.+.. .+.++.++++|++|++++++++++   
T Consensus         2 l~g-K~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~-~~~~~~~~~~Dvt~~~~v~~~~~~~~~   79 (258)
T d1iy8a_           2 FTD-RVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETA-PDAEVLTTVADVSDEAQVEAYVTATTE   79 (258)
T ss_dssp             CTT-CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHC-TTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCC-CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhC-CCCeEEEEeccCCCHHHHHHHHHHHHH
Confidence            345 999999999999999999999999999999975544333333333332 245788999999999999988876   


Q ss_pred             --CCCCEEEEccccccc-CCCCCCchhhHhh----hHHH----HHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCC
Q 025786          144 --NAFDAVMHFAAVAYV-GESTLDPLKYYHN----ITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEET  212 (248)
Q Consensus       144 --~~iD~li~~Ag~~~~-~~~~~~~~~~~~~----~~~~----~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~  212 (248)
                        +++|+||||||+... .+..+.+.+.|+.    |+.+    ++.+++.|++++.++||++||.+.+           .
T Consensus        80 ~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~-----------~  148 (258)
T d1iy8a_          80 RFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGI-----------R  148 (258)
T ss_dssp             HHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGT-----------S
T ss_pred             HhCCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhc-----------c
Confidence              789999999997643 3344444444543    3333    4457888888888999999998775           2


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          213 PQAPINPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       213 ~~~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      +.+...+|+.||++.+.|++.++.|   +||++++|.|
T Consensus       149 ~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~i~P  186 (258)
T d1iy8a_         149 GIGNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAP  186 (258)
T ss_dssp             BCSSBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEE
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHHhCccCceEEEEee
Confidence            3445779999999999999999988   5899999998

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=99.97  E-value=1.2e-29  Score=207.61  Aligned_cols=162  Identities=18%  Similarity=0.227  Sum_probs=131.7

Q ss_pred             CCceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc----
Q 025786           68 EGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----  143 (248)
Q Consensus        68 ~~~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~----  143 (248)
                      ++ |++|||||++|||+++|++|+++|++|++++|+.   +++.+..+++   +.++.++++|++|++++++++++    
T Consensus         4 ~g-K~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~---~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~   76 (254)
T d1hdca_           4 SG-KTVIITGGARGLGAEAARQAVAAGARVVLADVLD---EEGAATAREL---GDAARYQHLDVTIEEDWQRVVAYAREE   76 (254)
T ss_dssp             CC-SEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH---HHHHHHHHTT---GGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CC-CEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCH---HHHHHHHHHh---CCceEEEEcccCCHHHHHHHHHHHHHH
Confidence            44 9999999999999999999999999999999643   3444444444   45789999999999999998876    


Q ss_pred             -CCCCEEEEcccccccCCCCCCchhhHhhhH----HH----HHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCC
Q 025786          144 -NAFDAVMHFAAVAYVGESTLDPLKYYHNIT----SN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQ  214 (248)
Q Consensus       144 -~~iD~li~~Ag~~~~~~~~~~~~~~~~~~~----~~----~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~  214 (248)
                       +++|+||||||+....+..+.+.+.|+..+    .+    ++.++|.|++++.++||++||.+.+           .+.
T Consensus        77 ~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~-----------~~~  145 (254)
T d1hdca_          77 FGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGL-----------MGL  145 (254)
T ss_dssp             HSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT-----------SCC
T ss_pred             cCCccEEEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhc-----------ccc
Confidence             789999999998766665555555555433    33    4558888888888899999998775           234


Q ss_pred             CCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          215 APINPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       215 ~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      +...+|++||++.+.|++.++.|   +||++++|.|
T Consensus       146 ~~~~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~P  181 (254)
T d1hdca_         146 ALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHP  181 (254)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE
T ss_pred             cchhhHHHHHHHHHHHHHHHHHHhCCCceEEEEeee
Confidence            45779999999999999999987   5899999998

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.97  E-value=6.1e-30  Score=208.31  Aligned_cols=164  Identities=16%  Similarity=0.119  Sum_probs=129.9

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      ++||||||++|||+++|++|+++|++|++.+++  +.+.+.+..+++...+.++.++++|++|++++++++++     ++
T Consensus         2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~--~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   79 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYAR--SAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGT   79 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESS--CHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC--CHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            589999999999999999999999999987642  22223333333322356889999999999999988876     78


Q ss_pred             CCEEEEcccccccCCCCCCchhhHhhhHH----H----HHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYVGESTLDPLKYYHNITS----N----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (248)
Q Consensus       146 iD~li~~Ag~~~~~~~~~~~~~~~~~~~~----~----~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (248)
                      +|+||||||.....+..+.+.+.|+..+.    +    ++.++|.|++++.++||++||.+++           .+.+..
T Consensus        80 iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~-----------~~~~~~  148 (244)
T d1edoa_          80 IDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGL-----------IGNIGQ  148 (244)
T ss_dssp             CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHH-----------HCCTTC
T ss_pred             CCccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhc-----------CCCCCC
Confidence            99999999987666655555555554433    3    5558999988888999999998765           234446


Q ss_pred             ChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          218 NPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      .+|+.||++.+.|++.++.|   +||++++|.|
T Consensus       149 ~~Y~asKaal~~ltk~lA~el~~~gIrvN~I~P  181 (244)
T d1edoa_         149 ANYAAAKAGVIGFSKTAAREGASRNINVNVVCP  181 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEE
T ss_pred             HHHHHHHHHHHHChHHHHHHHhhhCcEEEEEec
Confidence            79999999999999999988   6899999998

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=99.97  E-value=1.9e-29  Score=206.62  Aligned_cols=165  Identities=15%  Similarity=0.195  Sum_probs=131.0

Q ss_pred             CCCceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc---
Q 025786           67 EEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE---  143 (248)
Q Consensus        67 ~~~~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~---  143 (248)
                      +++ |++|||||++|||+++|++|+++|++|++++|+..+   +.+..+++...+.++.++++|++|++++++++++   
T Consensus         9 L~g-K~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~---~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~   84 (255)
T d1fmca_           9 LDG-KCAIITGAGAGIGKEIAITFATAGASVVVSDINADA---ANHVVDEIQQLGGQAFACRCDITSEQELSALADFAIS   84 (255)
T ss_dssp             CTT-CEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHH---HHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCC-CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHH---HHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            455 999999999999999999999999999999975433   3333344433456889999999999999988876   


Q ss_pred             --CCCCEEEEcccccccCCCCCCchhhHhh----hHHH----HHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCC
Q 025786          144 --NAFDAVMHFAAVAYVGESTLDPLKYYHN----ITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETP  213 (248)
Q Consensus       144 --~~iD~li~~Ag~~~~~~~~~~~~~~~~~----~~~~----~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~  213 (248)
                        +++|+||||||.......+ .+.+.|+.    |+.+    ++.+++.|++++.++||++||.+.+           .+
T Consensus        85 ~~g~iDilvnnAG~~~~~~~e-~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~~-----------~~  152 (255)
T d1fmca_          85 KLGKVDILVNNAGGGGPKPFD-MPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAE-----------NK  152 (255)
T ss_dssp             HHSSCCEEEECCCCCCCCCTT-CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT-----------CC
T ss_pred             HcCCCCEeeeCCcCCCCCccc-CCHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccccchh-----------cc
Confidence              7899999999987655443 34444443    3333    4457888888888899999997775           23


Q ss_pred             CCCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          214 QAPINPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       214 ~~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      .+...+|++||++.+.|++.++.|   +||+|++|.|
T Consensus       153 ~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~P  189 (255)
T d1fmca_         153 NINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAP  189 (255)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEE
T ss_pred             ccccccchhHHHHHHHHHHHHHHHhCccCeEEEEeee
Confidence            445779999999999999999988   6899999998

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=99.97  E-value=1.6e-29  Score=206.20  Aligned_cols=160  Identities=20%  Similarity=0.260  Sum_probs=129.1

Q ss_pred             CCCceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc---
Q 025786           67 EEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE---  143 (248)
Q Consensus        67 ~~~~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~---  143 (248)
                      +.| |++|||||++|||+++++.|+++|++|++++|+...    .+..++.     ...++++|++|++++++++++   
T Consensus         3 l~G-K~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~----~~~~~~~-----~~~~~~~Dv~~~~~v~~~~~~~~~   72 (248)
T d2d1ya1           3 FAG-KGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG----KEVAEAI-----GGAFFQVDLEDERERVRFVEEAAY   72 (248)
T ss_dssp             TTT-CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH----HHHHHHH-----TCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCC-CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHH----HHHHHHc-----CCeEEEEeCCCHHHHHHHHHHHHH
Confidence            345 999999999999999999999999999999975322    2233333     346789999999999988876   


Q ss_pred             --CCCCEEEEcccccccCCCCCCchhhHhhhH----HH----HHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCC
Q 025786          144 --NAFDAVMHFAAVAYVGESTLDPLKYYHNIT----SN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETP  213 (248)
Q Consensus       144 --~~iD~li~~Ag~~~~~~~~~~~~~~~~~~~----~~----~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~  213 (248)
                        +++|+||||||+..+.+..+.+++.|+..+    .+    ++.++|.|++++.++||++||...+           .+
T Consensus        73 ~~G~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~-----------~~  141 (248)
T d2d1ya1          73 ALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGL-----------FA  141 (248)
T ss_dssp             HHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGT-----------SB
T ss_pred             hcCCCCeEEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhccccccccccccccccccccc-----------cc
Confidence              799999999998776666665556555443    33    4558889988888899999998775           23


Q ss_pred             CCCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          214 QAPINPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       214 ~~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      .+...+|+.||++.+.|++.++.|   +||++++|.|
T Consensus       142 ~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~P  178 (248)
T d2d1ya1         142 EQENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAP  178 (248)
T ss_dssp             CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE
T ss_pred             ccccchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEee
Confidence            445778999999999999999988   5899999998

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=99.97  E-value=9.6e-30  Score=207.02  Aligned_cols=162  Identities=15%  Similarity=0.133  Sum_probs=130.8

Q ss_pred             CCceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc----
Q 025786           68 EGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----  143 (248)
Q Consensus        68 ~~~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~----  143 (248)
                      ++ |+++||||++|||+++|+.|+++|++|++++|+.   +.+.+..+++   +.+...+.+|++|++++++++++    
T Consensus         3 ~g-K~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~---~~l~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~   75 (243)
T d1q7ba_           3 EG-KIALVTGASRGIGRAIAETLAARGAKVIGTATSE---NGAQAISDYL---GANGKGLMLNVTDPASIESVLEKIRAE   75 (243)
T ss_dssp             TT-CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSH---HHHHHHHHHH---GGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CC-CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCH---HHHHHHHHHh---CCCCcEEEEEecCHHHhhhhhhhhhcc
Confidence            44 9999999999999999999999999999999643   3334444444   24678899999999999988876    


Q ss_pred             -CCCCEEEEcccccccCCCCCCchhhHhhhHH----H----HHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCC
Q 025786          144 -NAFDAVMHFAAVAYVGESTLDPLKYYHNITS----N----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQ  214 (248)
Q Consensus       144 -~~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~----~----~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~  214 (248)
                       +++|+||||||.....+..+.+.+.|+..+.    +    ++.++|.|++++.++||++||.+.+-           +.
T Consensus        76 ~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~-----------~~  144 (243)
T d1q7ba_          76 FGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTM-----------GN  144 (243)
T ss_dssp             TCSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH-----------CC
T ss_pred             cCCcceehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhhcC-----------CC
Confidence             7899999999987766655555555554433    3    55588999888888999999987752           33


Q ss_pred             CCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          215 APINPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       215 ~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      +...+|++||++.+.|++.++.|   +||++++|.|
T Consensus       145 ~~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~I~P  180 (243)
T d1q7ba_         145 GGQANYAAAKAGLIGFSKSLAREVASRGITVNVVAP  180 (243)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEec
Confidence            44779999999999999999988   6899999998

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=99.97  E-value=1.6e-29  Score=207.78  Aligned_cols=166  Identities=16%  Similarity=0.157  Sum_probs=132.1

Q ss_pred             CCCceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc---
Q 025786           67 EEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE---  143 (248)
Q Consensus        67 ~~~~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~---  143 (248)
                      +.+ |++|||||++|||+++++.|+++|++|++++|+.   +.+.+..+++...+.++.++++|++|++++++++++   
T Consensus         3 L~g-K~alITGas~GIG~aia~~la~~Ga~V~~~~r~~---~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~   78 (260)
T d1zema1           3 FNG-KVCLVTGAGGNIGLATALRLAEEGTAIALLDMNR---EALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVR   78 (260)
T ss_dssp             TTT-CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH---HHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCC-CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH---HHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            345 9999999999999999999999999999999643   334444444444466899999999999999988876   


Q ss_pred             --CCCCEEEEccccccc-CCCCCCchhhHhhhH----HH----HHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCC
Q 025786          144 --NAFDAVMHFAAVAYV-GESTLDPLKYYHNIT----SN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEET  212 (248)
Q Consensus       144 --~~iD~li~~Ag~~~~-~~~~~~~~~~~~~~~----~~----~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~  212 (248)
                        +++|+||||||.... .+..+.+.+.|+..+    .+    ++.+++.|.+++.++||++||.+.+.           
T Consensus        79 ~~g~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~-----------  147 (260)
T d1zema1          79 DFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVK-----------  147 (260)
T ss_dssp             HHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHS-----------
T ss_pred             HhCCCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhhcc-----------
Confidence              789999999997643 344444555555433    33    45578888888889999999987762           


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          213 PQAPINPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       213 ~~~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      +.+...+|++||++.+.|++.++.|   +||++++|.|
T Consensus       148 ~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~P  185 (260)
T d1zema1         148 GPPNMAAYGTSKGAIIALTETAALDLAPYNIRVNAISP  185 (260)
T ss_dssp             CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE
T ss_pred             CCcchHHHHHHHHHHHHHHHHHHHHhhhhCCEEEEecc
Confidence            3344678999999999999999988   5799999998

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.96  E-value=1.8e-29  Score=206.38  Aligned_cols=167  Identities=16%  Similarity=0.161  Sum_probs=129.6

Q ss_pred             CCceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc----
Q 025786           68 EGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----  143 (248)
Q Consensus        68 ~~~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~----  143 (248)
                      ++ |++|||||++|||+++|+.|+++|++|++++|+..+.++..+.+.+.  .+.++.++++|++|++++++++++    
T Consensus         4 ~g-K~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~--~g~~~~~~~~Dv~~~~~v~~~~~~~~~~   80 (251)
T d1vl8a_           4 RG-RVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEK--YGVETMAFRCDVSNYEEVKKLLEAVKEK   80 (251)
T ss_dssp             TT-CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH--HCCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CC-CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHH--hCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            44 99999999999999999999999999999997543333322222221  145788999999999999998876    


Q ss_pred             -CCCCEEEEcccccccCCCCCCchhhHhhhH----HH----HHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCC
Q 025786          144 -NAFDAVMHFAAVAYVGESTLDPLKYYHNIT----SN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQ  214 (248)
Q Consensus       144 -~~iD~li~~Ag~~~~~~~~~~~~~~~~~~~----~~----~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~  214 (248)
                       +++|+||||||+....+..+.+.+.|+..+    .+    ++.++|.|++++.++||++||.....          .+.
T Consensus        81 ~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~~----------~~~  150 (251)
T d1vl8a_          81 FGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEE----------VTM  150 (251)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTC----------CCS
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchhcc----------ccC
Confidence             789999999998766655555555555433    33    45588888888888999999865421          123


Q ss_pred             CCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          215 APINPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       215 ~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      +...+|+.||++.+.|++.++.|   +||++++|.|
T Consensus       151 ~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~P  186 (251)
T d1vl8a_         151 PNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAP  186 (251)
T ss_dssp             SSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEE
T ss_pred             ccccchHHHHHhHHHHHHHHHHHhcccCeEEEEEee
Confidence            34678999999999999999988   6899999998

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=1.2e-29  Score=206.47  Aligned_cols=164  Identities=13%  Similarity=0.093  Sum_probs=130.8

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~  144 (248)
                      +|+++||||++|||+++|++|+++|++|++++|+..+   +.+..+++...+.++.++.||++|++++++++++     +
T Consensus         7 Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~---l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g   83 (244)
T d1yb1a_           7 GEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHG---LEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIG   83 (244)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHH---HHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHH---HHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHcC
Confidence            4999999999999999999999999999999975443   3333333333456899999999999999988875     7


Q ss_pred             CCCEEEEcccccccCCCCCCchhhHhh----hHHH----HHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCC
Q 025786          145 AFDAVMHFAAVAYVGESTLDPLKYYHN----ITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (248)
Q Consensus       145 ~iD~li~~Ag~~~~~~~~~~~~~~~~~----~~~~----~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~  216 (248)
                      ++|++|||||........+.+.+.|+.    |+.+    ++.++|.|.+++.++||++||.+++           .+.+.
T Consensus        84 ~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~-----------~~~~~  152 (244)
T d1yb1a_          84 DVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGH-----------VSVPF  152 (244)
T ss_dssp             CCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-C-----------CCHHH
T ss_pred             CCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhc-----------CCCCC
Confidence            899999999987766655555554443    3333    4558899999888999999997775           23444


Q ss_pred             CChHHHHHHHHHHHHHHHhhc------CCCcEEEEec
Q 025786          217 INPYGKAKKMAEDIILDFSKN------SDMAVLQCHR  247 (248)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~~~~------~gi~~~~v~P  247 (248)
                      +.+|++||++.+.|++.++.|      .||+++++.|
T Consensus       153 ~~~Y~asKaal~~~~~~La~El~~~~~~gI~V~~i~P  189 (244)
T d1yb1a_         153 LLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCP  189 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEE
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHhhcCCCEEEEEEEc
Confidence            678999999999999999976      4799999998

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=99.96  E-value=2.2e-29  Score=206.88  Aligned_cols=166  Identities=16%  Similarity=0.183  Sum_probs=130.2

Q ss_pred             CCceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc----
Q 025786           68 EGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----  143 (248)
Q Consensus        68 ~~~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~----  143 (248)
                      ++ |+++||||++|||+++|++|+++|++|++++|+..  +.+.+..+++...+.++.++++|++|++++++++++    
T Consensus         6 ~g-K~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~--~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~   82 (261)
T d1geea_           6 EG-KVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKE--DEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKE   82 (261)
T ss_dssp             TT-CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCH--HHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CC-CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcH--HHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            44 99999999999999999999999999999997532  223333333333356889999999999999988876    


Q ss_pred             -CCCCEEEEcccccccCCCCCCchhhHhhh----HHH----HHHHHHHHHHcCC-CEEEEeccceecCCCCCCCCCCCCC
Q 025786          144 -NAFDAVMHFAAVAYVGESTLDPLKYYHNI----TSN----TLVVLESMARHGV-DTLIYSSTCATYGEPEKMPITEETP  213 (248)
Q Consensus       144 -~~iD~li~~Ag~~~~~~~~~~~~~~~~~~----~~~----~~~ll~~~~~~~~-~~iV~~SS~~~~g~~~~~~~~e~~~  213 (248)
                       +++|+||||||+....+..+.+.+.|+..    +.+    ++.+++.|++++. ++||++||.+..           .+
T Consensus        83 ~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~-----------~~  151 (261)
T d1geea_          83 FGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEK-----------IP  151 (261)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGT-----------SC
T ss_pred             hCCCCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhc-----------cc
Confidence             78999999999876665555555555543    333    4557888887764 468999997765           23


Q ss_pred             CCCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          214 QAPINPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       214 ~~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      .+...+|+.||++.+.|++.++.|   +||++++|.|
T Consensus       152 ~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~P  188 (261)
T d1geea_         152 WPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGP  188 (261)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEE
T ss_pred             CccccccccCCccchhhHHHHHHHhhhhCcEEEEEee
Confidence            445778999999999999999988   5899999998

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.96  E-value=2.8e-29  Score=203.50  Aligned_cols=155  Identities=18%  Similarity=0.196  Sum_probs=121.9

Q ss_pred             CCCceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc---
Q 025786           67 EEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE---  143 (248)
Q Consensus        67 ~~~~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~---  143 (248)
                      +++ |++|||||++|||+++++.|+++|++|++++|+...              ..++..+++|++|++++++++++   
T Consensus         5 l~g-K~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~--------------~~~~~~~~~Dv~~~~~v~~~~~~~~~   69 (237)
T d1uzma1           5 FVS-RSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGA--------------PKGLFGVEVDVTDSDAVDRAFTAVEE   69 (237)
T ss_dssp             CCC-CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCC--------------CTTSEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCC-CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcch--------------hcCceEEEEecCCHHHHHHHHHHHHH
Confidence            355 999999999999999999999999999999975422              23567799999999999988876   


Q ss_pred             --CCCCEEEEcccccccCCCCCCchhhHhhh----HHH----HHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCC
Q 025786          144 --NAFDAVMHFAAVAYVGESTLDPLKYYHNI----TSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETP  213 (248)
Q Consensus       144 --~~iD~li~~Ag~~~~~~~~~~~~~~~~~~----~~~----~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~  213 (248)
                        +++|+||||||+....+..+.+.+.|+..    +.+    ++.+++.|++++.++||++||.+..           .+
T Consensus        70 ~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~~-----------~~  138 (237)
T d1uzma1          70 HQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGL-----------WG  138 (237)
T ss_dssp             HHSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC--------------
T ss_pred             hcCCceEEEeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcchhhc-----------cC
Confidence              78999999999876666555555555443    333    4557888998888899999997765           23


Q ss_pred             CCCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          214 QAPINPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       214 ~~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      .+...+|++||++.+.|++.++.|   +||++++|.|
T Consensus       139 ~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~P  175 (237)
T d1uzma1         139 IGNQANYAASKAGVIGMARSIARELSKANVTANVVAP  175 (237)
T ss_dssp             --CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE
T ss_pred             CcccHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeee
Confidence            345778999999999999999988   6899999998

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=99.96  E-value=2.7e-29  Score=206.26  Aligned_cols=165  Identities=14%  Similarity=0.133  Sum_probs=131.3

Q ss_pred             CCceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc----
Q 025786           68 EGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----  143 (248)
Q Consensus        68 ~~~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~----  143 (248)
                      ++ |++|||||++|||+++|+.|+++|++|++++|+.   +++.+..+++...+.++.++++|++|++++++++++    
T Consensus         7 ~G-K~alITGas~GIG~aia~~la~~Ga~V~~~~r~~---~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~   82 (259)
T d2ae2a_           7 EG-CTALVTGGSRGIGYGIVEELASLGASVYTCSRNQ---KELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANH   82 (259)
T ss_dssp             TT-CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCH---HHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CC-CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH---HHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHH
Confidence            44 9999999999999999999999999999999643   344444444444456888999999999999888765    


Q ss_pred             -C-CCCEEEEcccccccCCCCCCchhhHhhh----HHH----HHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCC
Q 025786          144 -N-AFDAVMHFAAVAYVGESTLDPLKYYHNI----TSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETP  213 (248)
Q Consensus       144 -~-~iD~li~~Ag~~~~~~~~~~~~~~~~~~----~~~----~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~  213 (248)
                       + ++|+||||||+....+..+.+.+.|+..    +.+    ++.++|.|++++.++||++||....           .+
T Consensus        83 ~~~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~-----------~~  151 (259)
T d2ae2a_          83 FHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGA-----------LA  151 (259)
T ss_dssp             TTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGT-----------SC
T ss_pred             hCCCceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhcccccccccccccc-----------cc
Confidence             3 7999999999876655555555555443    333    4558888888888899999997765           23


Q ss_pred             CCCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          214 QAPINPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       214 ~~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      .+...+|++||++.+.|++.++.|   +||++++|.|
T Consensus       152 ~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~P  188 (259)
T d2ae2a_         152 VPYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGP  188 (259)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEE
T ss_pred             cccccchHHHHHHHHHHHHHHHHHhCcCceEEEEeee
Confidence            445778999999999999999988   5799999998

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=99.96  E-value=7.4e-29  Score=202.72  Aligned_cols=165  Identities=18%  Similarity=0.265  Sum_probs=131.0

Q ss_pred             CCCceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc---
Q 025786           67 EEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE---  143 (248)
Q Consensus        67 ~~~~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~---  143 (248)
                      +++ |++|||||++|||+++|+.|+++|++|++++|+.   +.+.+..+++. .+.++.++++|++|++++++++++   
T Consensus         4 L~g-K~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~---~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~~~   78 (251)
T d1zk4a1           4 LDG-KVAIITGGTLGIGLAIATKFVEEGAKVMITGRHS---DVGEKAAKSVG-TPDQIQFFQHDSSDEDGWTKLFDATEK   78 (251)
T ss_dssp             TTT-CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCH---HHHHHHHHHHC-CTTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCC-CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH---HHHHHHHHHhC-CCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            455 9999999999999999999999999999999643   33444444443 356899999999999999988876   


Q ss_pred             --CCCCEEEEcccccccCCCCCCchhhHhhhH----HH----HHHHHHHHHHcCCC-EEEEeccceecCCCCCCCCCCCC
Q 025786          144 --NAFDAVMHFAAVAYVGESTLDPLKYYHNIT----SN----TLVVLESMARHGVD-TLIYSSTCATYGEPEKMPITEET  212 (248)
Q Consensus       144 --~~iD~li~~Ag~~~~~~~~~~~~~~~~~~~----~~----~~~ll~~~~~~~~~-~iV~~SS~~~~g~~~~~~~~e~~  212 (248)
                        +++|+||||||.....+..+.+.+.|+..+    .+    ++.+++.|++++.+ +||++||.+.+           .
T Consensus        79 ~~G~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~-----------~  147 (251)
T d1zk4a1          79 AFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGF-----------V  147 (251)
T ss_dssp             HHSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGT-----------S
T ss_pred             HhCCceEEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeecccee-----------c
Confidence              789999999998776666665555555443    33    44578888877654 89999998765           2


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHhhc-----CCCcEEEEec
Q 025786          213 PQAPINPYGKAKKMAEDIILDFSKN-----SDMAVLQCHR  247 (248)
Q Consensus       213 ~~~~~~~Y~~sK~a~e~l~~~~~~~-----~gi~~~~v~P  247 (248)
                      +.+...+|+.||++++.|++.++.|     +||++++|.|
T Consensus       148 ~~~~~~~Y~asKaal~~lt~~lA~e~~l~~~gIrVN~I~P  187 (251)
T d1zk4a1         148 GDPSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHP  187 (251)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEE
T ss_pred             cCCCchhHHHHHHHHhcchHHHHHHHhcCCCcEEEEEEeC
Confidence            3444679999999999999998865     5899999998

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=99.96  E-value=3.3e-29  Score=203.48  Aligned_cols=163  Identities=15%  Similarity=0.174  Sum_probs=131.1

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCE-------EEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYR-------VTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE  143 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~-------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~  143 (248)
                      ++||||||++|||+++|++|+++|++       |++++|+.   +.+.+..+++...+.++.++.+|++|++++++++++
T Consensus         2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~---~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~   78 (240)
T d2bd0a1           2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTA---ADLEKISLECRAEGALTDTITADISDMADVRRLTTH   78 (240)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCH---HHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHH
T ss_pred             CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCH---HHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHH
Confidence            57899999999999999999999997       77777543   344444444444566889999999999999988876


Q ss_pred             -----CCCCEEEEcccccccCCCCCCchhhHhh----hHHH----HHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCC
Q 025786          144 -----NAFDAVMHFAAVAYVGESTLDPLKYYHN----ITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITE  210 (248)
Q Consensus       144 -----~~iD~li~~Ag~~~~~~~~~~~~~~~~~----~~~~----~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e  210 (248)
                           +++|+||||||.....+..+.+.+.|+.    |+.+    ++.++|.|++++.++||++||.+.+          
T Consensus        79 ~~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~----------  148 (240)
T d2bd0a1          79 IVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAAT----------  148 (240)
T ss_dssp             HHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT----------
T ss_pred             HHHHcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhhc----------
Confidence                 7899999999987666655555555544    3333    5558999998888899999998776          


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          211 ETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       211 ~~~~~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                       .+.+...+|++||++.+.|++.++.|   +||++++|.|
T Consensus       149 -~~~~~~~~Y~asK~al~~lt~~la~el~~~gIrvn~i~P  187 (240)
T d2bd0a1         149 -KAFRHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQP  187 (240)
T ss_dssp             -SCCTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEE
T ss_pred             -CCCCCChHHHHHHHHHHHHHHHHHHHhCcCCeEEEEeee
Confidence             24455779999999999999999987   6899999998

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.96  E-value=4.4e-29  Score=204.93  Aligned_cols=165  Identities=11%  Similarity=0.060  Sum_probs=122.4

Q ss_pred             CCceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc----
Q 025786           68 EGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----  143 (248)
Q Consensus        68 ~~~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~----  143 (248)
                      ++ |++|||||++|||+++|+.|+++|++|++++|+..   ++.+..+++.....++.++.+|+++++++++++++    
T Consensus         7 kg-K~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~---~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   82 (259)
T d1xq1a_           7 KA-KTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEY---ELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSM   82 (259)
T ss_dssp             TT-CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHH---HHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CC-CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHH---HHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHH
Confidence            45 99999999999999999999999999999996543   34444444433456899999999999999888764    


Q ss_pred             --CCCCEEEEcccccccCCCCCCchhhHhhh----HHH----HHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCC
Q 025786          144 --NAFDAVMHFAAVAYVGESTLDPLKYYHNI----TSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETP  213 (248)
Q Consensus       144 --~~iD~li~~Ag~~~~~~~~~~~~~~~~~~----~~~----~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~  213 (248)
                        +++|+||||||.....+..+.+.+.|+..    +.+    ++.++|.|++++.++||++||....           .+
T Consensus        83 ~~g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~-----------~~  151 (259)
T d1xq1a_          83 FGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGV-----------VS  151 (259)
T ss_dssp             HTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC------------------
T ss_pred             hCCCcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhccccccccccccccccccc-----------cc
Confidence              57999999999876666555555555543    333    4557888888888999999997765           23


Q ss_pred             CCCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          214 QAPINPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       214 ~~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      .+...+|++||++.+.|++.++.|   +||++++|.|
T Consensus       152 ~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~V~P  188 (259)
T d1xq1a_         152 ASVGSIYSATKGALNQLARNLACEWASDGIRANAVAP  188 (259)
T ss_dssp             ---CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEC
T ss_pred             ccccccccccccchhhhhHHHHHHhcccCeEEEEecc
Confidence            445778999999999999999988   6899999998

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=99.96  E-value=5.4e-29  Score=211.77  Aligned_cols=176  Identities=36%  Similarity=0.633  Sum_probs=145.9

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li  150 (248)
                      |+||||||+||||+++++.|+++|++|++++|..+.........+...  ..++.++++|++|.+.+.++++..++|+||
T Consensus         1 MKiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~l~~~~~~~~~d~Vi   78 (338)
T d1udca_           1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLG--GKHPTFVEGDIRNEALMTEILHDHAIDTVI   78 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHH--TSCCEEEECCTTCHHHHHHHHHHTTCSEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhhc--CCCCEEEEeecCCHHHHHHHHhccCCCEEE
Confidence            459999999999999999999999999999986655444333333332  347899999999999999999887899999


Q ss_pred             EcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCC-CCCCCChHHHHHHHHHH
Q 025786          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEET-PQAPINPYGKAKKMAED  229 (248)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~-~~~~~~~Y~~sK~a~e~  229 (248)
                      |+|+.........++.+.++.|+.++.++++++++.+.+++|++||.++|+.....+..|.. ...|..+|+.+|.++|.
T Consensus        79 HlAa~~~~~~~~~~~~~~~~~Nv~gt~nlL~~~~~~~v~~~i~~Ss~~vy~~~~~~~~~e~~~~~~p~~~Y~~sK~~~e~  158 (338)
T d1udca_          79 HFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQ  158 (338)
T ss_dssp             ECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSSHHHHHHHHHHH
T ss_pred             ECCCccchhhHHhCHHHHHHhHHHHHHHHHHHHHHhCCCEEEecCcceEEccccccccccccccCCCcchHHHHHhhhhH
Confidence            99997644444456778899999999999999999999999999999999866655555444 55789999999999999


Q ss_pred             HHHHHhhc-CCCcEEEEecC
Q 025786          230 IILDFSKN-SDMAVLQCHRF  248 (248)
Q Consensus       230 l~~~~~~~-~gi~~~~v~Pf  248 (248)
                      ++..+..+ .+++++++||+
T Consensus       159 ~~~~~~~~~~~~~~~ilR~~  178 (338)
T d1udca_         159 ILTDLQKAQPDWSIALLRYF  178 (338)
T ss_dssp             HHHHHHHHSTTCEEEEEEEC
T ss_pred             HHHHHHhhccCCeEEEEeec
Confidence            99976665 58999999986

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=99.96  E-value=6.1e-29  Score=203.80  Aligned_cols=163  Identities=20%  Similarity=0.158  Sum_probs=129.1

Q ss_pred             CCCceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc---
Q 025786           67 EEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE---  143 (248)
Q Consensus        67 ~~~~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~---  143 (248)
                      +++ |+++||||++|||+++|+.|+++|++|++++|+   .+.+.+..+++   +.++.++++|++|++++++++++   
T Consensus         3 L~g-K~alVTGas~GIG~aia~~la~~Ga~V~~~~r~---~~~l~~~~~~~---~~~~~~~~~Dvt~~~~v~~~~~~~~~   75 (256)
T d1k2wa_           3 LDG-KTALITGSARGIGRAFAEAYVREGARVAIADIN---LEAARATAAEI---GPAACAIALDVTDQASIDRCVAELLD   75 (256)
T ss_dssp             TTT-EEEEEETCSSHHHHHHHHHHHHTTEEEEEEESC---HHHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCC-CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC---HHHHHHHHHHh---CCceEEEEeeCCCHHHHHHHHHHHHH
Confidence            445 999999999999999999999999999999964   34455555555   45788999999999999998876   


Q ss_pred             --CCCCEEEEcccccccCCCCCCchhhHhh----hHHH----HHHHHHHHHHc-CCCEEEEeccceecCCCCCCCCCCCC
Q 025786          144 --NAFDAVMHFAAVAYVGESTLDPLKYYHN----ITSN----TLVVLESMARH-GVDTLIYSSTCATYGEPEKMPITEET  212 (248)
Q Consensus       144 --~~iD~li~~Ag~~~~~~~~~~~~~~~~~----~~~~----~~~ll~~~~~~-~~~~iV~~SS~~~~g~~~~~~~~e~~  212 (248)
                        +++|+||||||+....+..+.+.+.|+.    |+.+    ++.+++.|.++ ..++||++||.+.+           .
T Consensus        76 ~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~-----------~  144 (256)
T d1k2wa_          76 RWGSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGR-----------R  144 (256)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGT-----------S
T ss_pred             HhCCccEEEeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhc-----------c
Confidence              7999999999987665555545555543    3333    33466665554 46799999998775           3


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          213 PQAPINPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       213 ~~~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      +.+...+|++||++.+.|++.++.|   +||++++|.|
T Consensus       145 ~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~P  182 (256)
T d1k2wa_         145 GEALVGVYCATKAAVISLTQSAGLNLIRHGINVNAIAP  182 (256)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE
T ss_pred             ccccccchhhhhhHHHHHHHHHHHHhcccCeEEEEEec
Confidence            4455779999999999999999987   6899999998

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=99.96  E-value=3.1e-29  Score=205.75  Aligned_cols=164  Identities=17%  Similarity=0.168  Sum_probs=127.8

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~  144 (248)
                      +|++|||||++|||+++|++|+++|++|++++|+..   .+.+..+++...+.++.++++|++|++++++++++     +
T Consensus         2 gKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~---~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g   78 (257)
T d2rhca1           2 SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEE---GLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYG   78 (257)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHH---HHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHH---HHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhC
Confidence            389999999999999999999999999999997543   33344444433456899999999999999988876     7


Q ss_pred             CCCEEEEcccccccCCCCCCchhhHh----hhHHHHHH----HHHH--HHHcCCCEEEEeccceecCCCCCCCCCCCCCC
Q 025786          145 AFDAVMHFAAVAYVGESTLDPLKYYH----NITSNTLV----VLES--MARHGVDTLIYSSTCATYGEPEKMPITEETPQ  214 (248)
Q Consensus       145 ~iD~li~~Ag~~~~~~~~~~~~~~~~----~~~~~~~~----ll~~--~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~  214 (248)
                      ++|+||||||+....+..+.+.+.|+    .|+.++..    ++|.  |.+++.++||++||...+           .+.
T Consensus        79 ~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~-----------~~~  147 (257)
T d2rhca1          79 PVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGK-----------QGV  147 (257)
T ss_dssp             SCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGT-----------SCC
T ss_pred             CCCEEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCcccccccccccc-----------ccc
Confidence            89999999998766555444444444    44444443    4553  345566799999997775           234


Q ss_pred             CCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          215 APINPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       215 ~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      +...+|++||++++.|++.++.|   +||++++|.|
T Consensus       148 ~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~P  183 (257)
T d2rhca1         148 VHAAPYSASKHGVVGFTKALGLELARTGITVNAVCP  183 (257)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEE
T ss_pred             ccchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEee
Confidence            45778999999999999999998   5799999998

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=3.5e-29  Score=213.15  Aligned_cols=178  Identities=25%  Similarity=0.274  Sum_probs=145.3

Q ss_pred             eEE-EEecCCchhHHHHHHHHHHCCCEEEEEecCCCCc--chhhhhhhhhc-CCCCceEEEEccCCCHHHHHHHhhcCCC
Q 025786           71 THV-LVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGN--IGAVKVLQELF-PEPGRLQFIYADLGDAKAVNKFFSENAF  146 (248)
Q Consensus        71 k~v-lITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~--~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~~i  146 (248)
                      |+| ||||||||||++++++|+++||+|++++|.....  ........... ....++.++.+|++|.+.+.+++.+.++
T Consensus         1 kKI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~   80 (347)
T d1t2aa_           1 RNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKP   80 (347)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHCC
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhccc
Confidence            456 9999999999999999999999999999854321  11111111111 1134789999999999999999988788


Q ss_pred             CEEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCC---CEEEEeccceecCCCCCCCCCCCCCCCCCChHHHH
Q 025786          147 DAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV---DTLIYSSTCATYGEPEKMPITEETPQAPINPYGKA  223 (248)
Q Consensus       147 D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~---~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~s  223 (248)
                      ++++|+|+..........+..+++.|+.+|.++++++++.+.   .++|++||.++||.....+++|+++..|.++|+.|
T Consensus        81 ~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~P~~~Yg~s  160 (347)
T d1t2aa_          81 TEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAA  160 (347)
T ss_dssp             SEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTTSCCCCCSHHHHH
T ss_pred             ceeeeeeeccccchhhccchhhhhhHHHHHHHHHHHHHHcCCCCCcEEEEecchheecCCCCCCCCCCCCCCCCCHHHHH
Confidence            999999987654444556677788999999999999988753   48999999999998888889999999999999999


Q ss_pred             HHHHHHHHHHHhhcCCCcEEEEecC
Q 025786          224 KKMAEDIILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       224 K~a~e~l~~~~~~~~gi~~~~v~Pf  248 (248)
                      |.++|++++.++++++++++++||+
T Consensus       161 K~~aE~~~~~~~~~~~~~~~ilr~~  185 (347)
T d1t2aa_         161 KLYAYWIVVNFREAYNLFAVNGILF  185 (347)
T ss_dssp             HHHHHHHHHHHHHHHCCEEEEEEEC
T ss_pred             HHHHHHHHHHHHHHhCCCEEEEEec
Confidence            9999999999999999999999985

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.96  E-value=8.4e-29  Score=201.29  Aligned_cols=160  Identities=16%  Similarity=0.166  Sum_probs=125.9

Q ss_pred             CCCceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc---
Q 025786           67 EEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE---  143 (248)
Q Consensus        67 ~~~~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~---  143 (248)
                      +++ |++|||||++|||+++|+.|+++|++|++++|+.   +.+.+..+++     +..++++|++|++++++++++   
T Consensus         3 L~g-K~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~---~~l~~~~~~~-----~~~~~~~Dv~~~~~v~~~~~~~~~   73 (242)
T d1ulsa_           3 LKD-KAVLITGAAHGIGRATLELFAKEGARLVACDIEE---GPLREAAEAV-----GAHPVVMDVADPASVERGFAEALA   73 (242)
T ss_dssp             TTT-CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH---HHHHHHHHTT-----TCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCC-CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH---HHHHHHHHHc-----CCeEEEEecCCHHHHHHHHHHHHH
Confidence            345 9999999999999999999999999999999643   3333333332     467899999999999998876   


Q ss_pred             --CCCCEEEEcccccccCCCCCCchhhHhhhH----HH----HHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCC
Q 025786          144 --NAFDAVMHFAAVAYVGESTLDPLKYYHNIT----SN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETP  213 (248)
Q Consensus       144 --~~iD~li~~Ag~~~~~~~~~~~~~~~~~~~----~~----~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~  213 (248)
                        +++|+||||||+....+..+.+.+.|+..+    .+    ++.+++.|++++.++++++||....            +
T Consensus        74 ~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss~~~~------------~  141 (242)
T d1ulsa_          74 HLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVYL------------G  141 (242)
T ss_dssp             HHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGGGG------------C
T ss_pred             hcCCceEEEECCcccccCchhhCcchhhhccccccchhhhhhhhhccccccccccceeeeecccccc------------C
Confidence              789999999998766665555555555443    33    4457888887777788888886544            2


Q ss_pred             CCCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          214 QAPINPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       214 ~~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      .++..+|++||++.+.|++.++.|   +||++++|.|
T Consensus       142 ~~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~P  178 (242)
T d1ulsa_         142 NLGQANYAASMAGVVGLTRTLALELGRWGIRVNTLAP  178 (242)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE
T ss_pred             CCCCcchHHHHHHHHHHHHHHHHHHhhhCcEEEEEee
Confidence            334678999999999999999988   5899999998

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.96  E-value=6.7e-29  Score=211.82  Aligned_cols=176  Identities=40%  Similarity=0.664  Sum_probs=147.4

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li  150 (248)
                      |+|||||||||||++++++|+++|++|+++++..++............  ..++.++++|++|.++++.+++..++|+||
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~--~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vi   79 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLT--KHHIPFYEVDLCDRKGLEKVFKEYKIDSVI   79 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHH--TSCCCEEECCTTCHHHHHHHHHHSCCCEEE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhc--ccCCeEEEeecCCHHHHHHHHhccCCCEEE
Confidence            689999999999999999999999999999876555433322223322  346889999999999999999877899999


Q ss_pred             EcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCC----CCCCCCCCCCCCCChHHHHHHH
Q 025786          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPE----KMPITEETPQAPINPYGKAKKM  226 (248)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~----~~~~~e~~~~~~~~~Y~~sK~a  226 (248)
                      |+|+........+.+..++..|+.++.++++++++.+.+++|++||..+||...    ..+++|+.+..|.++|+.||.+
T Consensus        80 hlAa~~~~~~~~~~~~~~~~~N~~~t~~ll~~~~~~~i~~~i~~SS~~vyg~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~  159 (347)
T d1z45a2          80 HFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYA  159 (347)
T ss_dssp             ECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCCCCSHHHHHHHH
T ss_pred             EccccccccccccCcccccccchhhhHHHHHHHHhcccceEEeecceeeecCcccCCCCCccccccCCCCCChhHhHHHH
Confidence            999976544445567788889999999999999999999999999999998543    3457888888999999999999


Q ss_pred             HHHHHHHHhhc--CCCcEEEEecC
Q 025786          227 AEDIILDFSKN--SDMAVLQCHRF  248 (248)
Q Consensus       227 ~e~l~~~~~~~--~gi~~~~v~Pf  248 (248)
                      +|++++.+.+.  .+++++++||+
T Consensus       160 ~E~~~~~~~~~~~~~~~~~~lR~~  183 (347)
T d1z45a2         160 IENILNDLYNSDKKSWKFAILRYF  183 (347)
T ss_dssp             HHHHHHHHHHHSTTSCEEEEEEEC
T ss_pred             HHHHHHHHHHhhccCCcEEEEeec
Confidence            99999998764  68999999985

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=99.96  E-value=8.4e-29  Score=202.88  Aligned_cols=163  Identities=21%  Similarity=0.219  Sum_probs=128.0

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~  145 (248)
                      |++|||||++|||+++|++|+++|++|++++|+..+   +.+..+++...+.++.++++|++|++++++++++     ++
T Consensus         2 KValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~---l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   78 (255)
T d1gega_           2 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDAT---AKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGG   78 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHH---HHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTC
T ss_pred             CEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHH---HHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCC
Confidence            678999999999999999999999999999975433   3333333433456889999999999999988876     78


Q ss_pred             CCEEEEcccccccCCCCCCchhhHh----hhHHH----HHHHHHHHHHcC-CCEEEEeccceecCCCCCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYVGESTLDPLKYYH----NITSN----TLVVLESMARHG-VDTLIYSSTCATYGEPEKMPITEETPQAP  216 (248)
Q Consensus       146 iD~li~~Ag~~~~~~~~~~~~~~~~----~~~~~----~~~ll~~~~~~~-~~~iV~~SS~~~~g~~~~~~~~e~~~~~~  216 (248)
                      +|+||||||+....+..+.+.+.|+    .|+.+    ++.++|.|.+.+ .++||++||.+.+           .+.+.
T Consensus        79 iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~-----------~~~~~  147 (255)
T d1gega_          79 FDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGH-----------VGNPE  147 (255)
T ss_dssp             CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGT-----------SCCTT
T ss_pred             ccEEEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhc-----------ccCcc
Confidence            9999999998766555555555554    34433    344677766664 5689999997765           24445


Q ss_pred             CChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          217 INPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      ..+|++||++.+.|++.++.|   +||++++|.|
T Consensus       148 ~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~P  181 (255)
T d1gega_         148 LAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCP  181 (255)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE
T ss_pred             cccchhCHHHHHhhHHHHHHHhhhhCcEEEEEec
Confidence            778999999999999999988   6899999998

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.96  E-value=1.1e-28  Score=204.11  Aligned_cols=169  Identities=16%  Similarity=0.122  Sum_probs=125.4

Q ss_pred             CCCceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc---
Q 025786           67 EEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE---  143 (248)
Q Consensus        67 ~~~~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~---  143 (248)
                      +++ |++|||||++|||+++|+.|+++|++|++++|+..+.++..+.+++......++.++++|++|++++++++++   
T Consensus         3 L~g-K~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~   81 (272)
T d1xkqa_           3 FSN-KTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLK   81 (272)
T ss_dssp             TTT-CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCC-CEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHH
Confidence            455 9999999999999999999999999999999754443444444433322345789999999999999988876   


Q ss_pred             --CCCCEEEEcccccccCCCC----CCchhhHh----hhHHH----HHHHHHHHHHcCCCEEEEeccceecCCCCCCCCC
Q 025786          144 --NAFDAVMHFAAVAYVGEST----LDPLKYYH----NITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPIT  209 (248)
Q Consensus       144 --~~iD~li~~Ag~~~~~~~~----~~~~~~~~----~~~~~----~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~  209 (248)
                        +++|+||||||........    +.+.+.|+    .|+.+    ++.++|.|++++.+.|+++||.+..         
T Consensus        82 ~~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~Ss~a~~---------  152 (272)
T d1xkqa_          82 QFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGP---------  152 (272)
T ss_dssp             HHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSS---------
T ss_pred             HhCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccCCccccccchhccc---------
Confidence              7899999999986544322    22233343    34333    4557888877765445555555543         


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          210 EETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       210 e~~~~~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                        .+.+...+|++||++.+.|++.++.|   +||+|++|.|
T Consensus       153 --~~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~P  191 (272)
T d1xkqa_         153 --QAQPDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSP  191 (272)
T ss_dssp             --SCCCSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEE
T ss_pred             --cCCCCcchhhhHHHHHHHHHHHHHHHhcccCeEEEEEee
Confidence              23444678999999999999999988   6899999998

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=2.6e-28  Score=198.62  Aligned_cols=162  Identities=18%  Similarity=0.176  Sum_probs=127.6

Q ss_pred             CCCceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-CC
Q 025786           67 EEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-NA  145 (248)
Q Consensus        67 ~~~~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-~~  145 (248)
                      +.| |++|||||++|||+++|+.|+++|++|++++|+.   +++.+..+++    ..+..+.+|++|++++++++++ ++
T Consensus         5 L~G-K~~lITGas~GIG~aia~~la~~G~~V~~~~r~~---~~l~~~~~~~----~~~~~~~~Dv~d~~~v~~~~~~~g~   76 (244)
T d1pr9a_           5 LAG-RRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQ---ADLDSLVREC----PGIEPVCVDLGDWEATERALGSVGP   76 (244)
T ss_dssp             CTT-CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH---HHHHHHHHHS----TTCEEEECCTTCHHHHHHHHTTCCC
T ss_pred             CCC-CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCH---HHHHHHHHhc----CCCeEEEEeCCCHHHHHHHHHHhCC
Confidence            345 9999999999999999999999999999999643   3344433333    3578899999999999999987 78


Q ss_pred             CCEEEEcccccccCCCCCCchhhHhhhHH----H----HHHHHHHHH-HcCCCEEEEeccceecCCCCCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYVGESTLDPLKYYHNITS----N----TLVVLESMA-RHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (248)
Q Consensus       146 iD~li~~Ag~~~~~~~~~~~~~~~~~~~~----~----~~~ll~~~~-~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~  216 (248)
                      +|+||||||.....+..+.+.+.|+..+.    +    ++.+++.+. +.+.++||++||.+...           +.+.
T Consensus        77 iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~-----------~~~~  145 (244)
T d1pr9a_          77 VDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQR-----------AVTN  145 (244)
T ss_dssp             CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTS-----------CCTT
T ss_pred             ceEEEeccccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeecccccccc-----------cccc
Confidence            99999999987666655555555554433    3    444777554 44568999999987752           3444


Q ss_pred             CChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          217 INPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      ..+|+.||++.+.|++.++.|   +||++++|.|
T Consensus       146 ~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~P  179 (244)
T d1pr9a_         146 HSVYCSTKGALDMLTKVMALELGPHKIRVNAVNP  179 (244)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE
T ss_pred             hhhhhhhHHHHHHHHHHHHHHhCCCcEEEEEEee
Confidence            678999999999999999988   5899999998

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.96  E-value=1.2e-28  Score=203.00  Aligned_cols=168  Identities=13%  Similarity=0.133  Sum_probs=121.2

Q ss_pred             CCCceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc---
Q 025786           67 EEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE---  143 (248)
Q Consensus        67 ~~~~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~---  143 (248)
                      +++ |++|||||++|||+++|++|+++|++|++++|+..+.++..+.+.+......++.++++|++|++++++++++   
T Consensus         3 l~g-KvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~   81 (264)
T d1spxa_           3 FAE-KVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLG   81 (264)
T ss_dssp             TTT-CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCC-CEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHH
Confidence            455 9999999999999999999999999999999765444444444444333345789999999999999998876   


Q ss_pred             --CCCCEEEEcccccccCC----CCCCchhhHh----hhHHH----HHHHHHHHHHcCCCEEEEecc-ceecCCCCCCCC
Q 025786          144 --NAFDAVMHFAAVAYVGE----STLDPLKYYH----NITSN----TLVVLESMARHGVDTLIYSST-CATYGEPEKMPI  208 (248)
Q Consensus       144 --~~iD~li~~Ag~~~~~~----~~~~~~~~~~----~~~~~----~~~ll~~~~~~~~~~iV~~SS-~~~~g~~~~~~~  208 (248)
                        +++|+||||||......    ..+.+.+.|+    .|+.+    ++.++|.|++.+. .+|+++| .+.+        
T Consensus        82 ~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~g-~iI~~~S~~~~~--------  152 (264)
T d1spxa_          82 KFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKG-EIVNISSIASGL--------  152 (264)
T ss_dssp             HHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC-EEEEECCTTSSS--------
T ss_pred             HhCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCccccccC-cceeeeeecccc--------
Confidence              78999999999754322    2222334444    34443    4557888877764 5555554 4333        


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          209 TEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       209 ~e~~~~~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                         .+.+...+|+.||++.+.|++.++.|   +||++++|.|
T Consensus       153 ---~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~P  191 (264)
T d1spxa_         153 ---HATPDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISP  191 (264)
T ss_dssp             ---SCCTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEE
T ss_pred             ---ccCCCchhhhhhhhhHHHHHHHHHHHhcccCeEEEEEee
Confidence               23344678999999999999999988   6899999998

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.96  E-value=1.6e-28  Score=203.26  Aligned_cols=169  Identities=17%  Similarity=0.158  Sum_probs=128.8

Q ss_pred             CCCceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc---
Q 025786           67 EEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE---  143 (248)
Q Consensus        67 ~~~~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~---  143 (248)
                      +.| |+++||||++|||+++|++|+++|++|++++|+..+.++..+.+.+......++.++.+|++|++++++++++   
T Consensus         2 L~g-K~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   80 (274)
T d1xhla_           2 FSG-KSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLA   80 (274)
T ss_dssp             CTT-CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCC-CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHH
Confidence            345 9999999999999999999999999999999754443444444444322334789999999999999988876   


Q ss_pred             --CCCCEEEEcccccccCC--CCCCchhhHh----hhHHH----HHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCC
Q 025786          144 --NAFDAVMHFAAVAYVGE--STLDPLKYYH----NITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEE  211 (248)
Q Consensus       144 --~~iD~li~~Ag~~~~~~--~~~~~~~~~~----~~~~~----~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~  211 (248)
                        +++|++|||||......  ..+.+.+.|+    .|+.+    ++.+++.|++++.++|+++||.+..           
T Consensus        81 ~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~~-----------  149 (274)
T d1xhla_          81 KFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGP-----------  149 (274)
T ss_dssp             HHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSS-----------
T ss_pred             HcCCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccccccccchhhhhcc-----------
Confidence              78999999999754332  2222334444    33333    5568888888877888888886654           


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          212 TPQAPINPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       212 ~~~~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      .+.+...+|+.||++.+.|++.++.|   +||++++|.|
T Consensus       150 ~~~~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~P  188 (274)
T d1xhla_         150 QAHSGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSP  188 (274)
T ss_dssp             SCCTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEE
T ss_pred             ccCCCCceehhhhhHHHHHHHHHHHHHhHhCCceeeecc
Confidence            23344678999999999999999988   5899999998

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=2.7e-28  Score=199.07  Aligned_cols=161  Identities=22%  Similarity=0.199  Sum_probs=125.7

Q ss_pred             CCCceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc---
Q 025786           67 EEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE---  143 (248)
Q Consensus        67 ~~~~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~---  143 (248)
                      +.| |++|||||++|||+++++.|+++|++|++++|+.   +.+.+..+++    .++.++.+|++|++++++++++   
T Consensus         4 l~G-K~alITGas~GIG~aia~~la~~Ga~V~i~~r~~---~~~~~~~~~~----~~~~~~~~Dvs~~~~v~~~~~~~~~   75 (250)
T d1ydea1           4 YAG-KVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDE---SGGRALEQEL----PGAVFILCDVTQEDDVKTLVSETIR   75 (250)
T ss_dssp             TTT-CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCH---HHHHHHHHHC----TTEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCC-CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH---HHHHHHHHhc----CCCeEEEccCCCHHHHHHHHHHHHH
Confidence            455 9999999999999999999999999999999643   3333333332    3678899999999999998876   


Q ss_pred             --CCCCEEEEccccccc-CCCCCCchhhHh----hhHHH----HHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCC
Q 025786          144 --NAFDAVMHFAAVAYV-GESTLDPLKYYH----NITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEET  212 (248)
Q Consensus       144 --~~iD~li~~Ag~~~~-~~~~~~~~~~~~----~~~~~----~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~  212 (248)
                        +++|+||||||.... ...++.+.+.|+    .|+.+    ++.++|.|++.+ ++||++||.+..-           
T Consensus        76 ~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-G~Ii~isS~~~~~-----------  143 (250)
T d1ydea1          76 RFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQ-GNVINISSLVGAI-----------  143 (250)
T ss_dssp             HHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCHHHHH-----------
T ss_pred             hcCCCCEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCC-CCCcccccccccc-----------
Confidence              789999999997543 333344444444    34333    455888887765 7999999987752           


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          213 PQAPINPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       213 ~~~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      +.+...+|+.||++.+.|++.++.|   +||++++|.|
T Consensus       144 ~~~~~~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~P  181 (250)
T d1ydea1         144 GQAQAVPYVATKGAVTAMTKALALDESPYGVRVNCISP  181 (250)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEE
T ss_pred             cccCcchhHHHHhhHHHHHHHHHHHhcccCeEEEEEee
Confidence            3445679999999999999999988   6899999998

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=99.96  E-value=7.1e-28  Score=198.73  Aligned_cols=166  Identities=14%  Similarity=0.181  Sum_probs=128.8

Q ss_pred             CCCCceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc--
Q 025786           66 HEEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE--  143 (248)
Q Consensus        66 ~~~~~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--  143 (248)
                      ++.+ |++|||||++|||+++|+.|+++|++|++++|+.   +.+.+..+++.. .+.+.++++|++|++++++++++  
T Consensus         3 rL~g-KvalITGas~GIG~aia~~la~~Ga~V~i~~r~~---~~~~~~~~~l~~-~~~~~~~~~Dv~~~~~v~~~~~~~~   77 (268)
T d2bgka1           3 RLQD-KVAIITGGAGGIGETTAKLFVRYGAKVVIADIAD---DHGQKVCNNIGS-PDVISFVHCDVTKDEDVRNLVDTTI   77 (268)
T ss_dssp             TTTT-CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH---HHHHHHHHHHCC-TTTEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCC-CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCH---HHHHHHHHHhcC-CCceEEEEccCCCHHHHHHHHHHHH
Confidence            3455 9999999999999999999999999999999643   344444455533 45688899999999999998876  


Q ss_pred             ---CCCCEEEEcccccccCC--CCCCchhhHhh----hHHH----HHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCC
Q 025786          144 ---NAFDAVMHFAAVAYVGE--STLDPLKYYHN----ITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITE  210 (248)
Q Consensus       144 ---~~iD~li~~Ag~~~~~~--~~~~~~~~~~~----~~~~----~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e  210 (248)
                         +++|+||||||+....+  ..+.+.+.|+.    |+.+    ++.+++.|++++.++||++||...+-         
T Consensus        78 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~~---------  148 (268)
T d2bgka1          78 AKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFT---------  148 (268)
T ss_dssp             HHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTC---------
T ss_pred             HHcCCcceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCccccccccccc---------
Confidence               79999999999865432  33444444443    3333    55588888888888999999977652         


Q ss_pred             CCCCCC-CChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          211 ETPQAP-INPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       211 ~~~~~~-~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                        +..+ ...|++||++.+.|++.++.|   +||+|++|.|
T Consensus       149 --~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~P  187 (268)
T d2bgka1         149 --AGEGVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSP  187 (268)
T ss_dssp             --CCTTSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE
T ss_pred             --cccccccccchhHHHHHhCHHHHHHHhChhCeEEEecCC
Confidence              2222 347999999999999999988   6899999998

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.96  E-value=3.9e-28  Score=197.28  Aligned_cols=161  Identities=17%  Similarity=0.178  Sum_probs=126.6

Q ss_pred             CCceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-CCC
Q 025786           68 EGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-NAF  146 (248)
Q Consensus        68 ~~~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-~~i  146 (248)
                      .| |++|||||++|||++++++|+++|++|++++|+.   +++.+..++.    ..+.++.+|++|++++++++++ +++
T Consensus         4 ~G-K~alITGas~GIG~aia~~la~~Ga~V~~~~r~~---~~l~~~~~~~----~~~~~~~~Dv~~~~~v~~~~~~~g~i   75 (242)
T d1cyda_           4 SG-LRALVTGAGKGIGRDTVKALHASGAKVVAVTRTN---SDLVSLAKEC----PGIEPVCVDLGDWDATEKALGGIGPV   75 (242)
T ss_dssp             TT-CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH---HHHHHHHHHS----TTCEEEECCTTCHHHHHHHHTTCCCC
T ss_pred             CC-CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCH---HHHHHHHHhc----CCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence            45 9999999999999999999999999999999643   3333433333    3578899999999999999988 789


Q ss_pred             CEEEEcccccccCCCCCCchhhHhhhH----HH----HHHHHHHHHHc-CCCEEEEeccceecCCCCCCCCCCCCCCCCC
Q 025786          147 DAVMHFAAVAYVGESTLDPLKYYHNIT----SN----TLVVLESMARH-GVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (248)
Q Consensus       147 D~li~~Ag~~~~~~~~~~~~~~~~~~~----~~----~~~ll~~~~~~-~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (248)
                      |+||||||+....+..+.+.+.|+..+    .+    ++.+++.|.++ ..++||++||...+           .+.+..
T Consensus        76 DilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~-----------~~~~~~  144 (242)
T d1cyda_          76 DLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAH-----------VTFPNL  144 (242)
T ss_dssp             SEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGT-----------SCCTTB
T ss_pred             eEEEECCccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhcc-----------ccCCcc
Confidence            999999998766665555555555433    33    33466665544 45799999997765           234446


Q ss_pred             ChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          218 NPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      .+|+.||++.+.|++.++.|   +||++++|.|
T Consensus       145 ~~Y~asKaal~~lt~~lA~e~~~~gIrvN~I~P  177 (242)
T d1cyda_         145 ITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNP  177 (242)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE
T ss_pred             ccccchHHHHHHHHHHHHHHhCccCeecccCCC
Confidence            78999999999999999988   6899999998

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.96  E-value=3e-28  Score=199.28  Aligned_cols=162  Identities=17%  Similarity=0.262  Sum_probs=128.2

Q ss_pred             CCCceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc---
Q 025786           67 EEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE---  143 (248)
Q Consensus        67 ~~~~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~---  143 (248)
                      +++ |++|||||++|||+++++.|+++|++|++++|+   .+.+.+..+++   +.+..++++|++|++++++++++   
T Consensus         4 L~g-K~alITGas~GIG~aia~~la~~Ga~V~~~~~~---~~~~~~~~~~~---~~~~~~~~~Dv~~~~~~~~~~~~~~~   76 (253)
T d1hxha_           4 LQG-KVALVTGGASGVGLEVVKLLLGEGAKVAFSDIN---EAAGQQLAAEL---GERSMFVRHDVSSEADWTLVMAAVQR   76 (253)
T ss_dssp             TTT-CEEEETTTTSHHHHHHHHHHHHTTCEEEEECSC---HHHHHHHHHHH---CTTEEEECCCTTCHHHHHHHHHHHHH
T ss_pred             CCC-CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC---HHHHHHHHHHh---CCCeEEEEeecCCHHHHHHHHHHHHH
Confidence            455 999999999999999999999999999999864   33444444444   35688899999999999988876   


Q ss_pred             --CCCCEEEEcccccccCCCCCCchhhHhhhHH----H----HHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCC
Q 025786          144 --NAFDAVMHFAAVAYVGESTLDPLKYYHNITS----N----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETP  213 (248)
Q Consensus       144 --~~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~----~----~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~  213 (248)
                        +++|+||||||+....+..+.+.+.|+..+.    +    ++.++|.|++++ ++||++||.+.+           .+
T Consensus        77 ~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-G~Iv~isS~~~~-----------~~  144 (253)
T d1hxha_          77 RLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-GSIINMASVSSW-----------LP  144 (253)
T ss_dssp             HHCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-EEEEEECCGGGT-----------SC
T ss_pred             HhCCCCeEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcC-Cceecccchhhh-----------cC
Confidence              7899999999987666555555555554433    3    455788886554 799999998775           24


Q ss_pred             CCCCChHHHHHHHHHHHHHHHhhc-----CCCcEEEEec
Q 025786          214 QAPINPYGKAKKMAEDIILDFSKN-----SDMAVLQCHR  247 (248)
Q Consensus       214 ~~~~~~Y~~sK~a~e~l~~~~~~~-----~gi~~~~v~P  247 (248)
                      .+...+|+.||++.+.|++.++.|     ++|++++|.|
T Consensus       145 ~~~~~~Y~asKaal~~lt~~lA~e~~~~g~~IrVN~I~P  183 (253)
T d1hxha_         145 IEQYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHP  183 (253)
T ss_dssp             CTTBHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEE
T ss_pred             ccccccccchhHHHHHHHHHHHHHHhhcCCCEEEEEEeE
Confidence            445678999999999999999876     4599999998

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=6.2e-28  Score=197.85  Aligned_cols=170  Identities=16%  Similarity=0.140  Sum_probs=129.9

Q ss_pred             CCCceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc---
Q 025786           67 EEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE---  143 (248)
Q Consensus        67 ~~~~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~---  143 (248)
                      .++ |++|||||++|||+++|+.|+++|++|++++|+..+.+++.+.+++.. .+.++.+++||++|++++++++++   
T Consensus         8 lk~-Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~-~~~~~~~~~~Dls~~~~v~~~v~~~~~   85 (257)
T d1xg5a_           8 WRD-RLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAG-YPGTLIPYRCDLSNEEDILSMFSAIRS   85 (257)
T ss_dssp             GTT-CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-CSSEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCC-CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-CCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            445 999999999999999999999999999999975444344444344321 235788999999999999998876   


Q ss_pred             --CCCCEEEEcccccccCCCCCCchhhHhhhHH----H----HHHHHHHHHHcC--CCEEEEeccceecCCCCCCCCCCC
Q 025786          144 --NAFDAVMHFAAVAYVGESTLDPLKYYHNITS----N----TLVVLESMARHG--VDTLIYSSTCATYGEPEKMPITEE  211 (248)
Q Consensus       144 --~~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~----~----~~~ll~~~~~~~--~~~iV~~SS~~~~g~~~~~~~~e~  211 (248)
                        +++|+||||||.....+..+.+.+.|+..+.    +    ++.+++.|++++  .++||++||.+.+..         
T Consensus        86 ~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~---------  156 (257)
T d1xg5a_          86 QHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRV---------  156 (257)
T ss_dssp             HHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSC---------
T ss_pred             hcCCCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCC---------
Confidence              7899999999987766665555555554433    3    344677777654  579999999876521         


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHhhc-----CCCcEEEEec
Q 025786          212 TPQAPINPYGKAKKMAEDIILDFSKN-----SDMAVLQCHR  247 (248)
Q Consensus       212 ~~~~~~~~Y~~sK~a~e~l~~~~~~~-----~gi~~~~v~P  247 (248)
                      .|......|+.||++.+.+++.++.|     +||++++|.|
T Consensus       157 ~p~~~~~~Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~P  197 (257)
T d1xg5a_         157 LPLSVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISP  197 (257)
T ss_dssp             CSCGGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEE
T ss_pred             CCCcccHHHHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeC
Confidence            12233557999999999999999865     6899999998

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.95  E-value=4.4e-28  Score=206.15  Aligned_cols=177  Identities=27%  Similarity=0.375  Sum_probs=149.6

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcC--CCCceEEEEccCCCHHHHHHHhhcCCCC
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFP--EPGRLQFIYADLGDAKAVNKFFSENAFD  147 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~~~~iD  147 (248)
                      +|+||||||||+||++++++|.++|++|+++||..+..............  ...++.++.+|+.|...+.....  ..|
T Consensus        16 ~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~--~~~   93 (341)
T d1sb8a_          16 PKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACA--GVD   93 (341)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHT--TCS
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeeccccccccccccc--ccc
Confidence            38999999999999999999999999999999765544333222222211  12468899999999988776665  679


Q ss_pred             EEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCCChHHHHHHHH
Q 025786          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMA  227 (248)
Q Consensus       148 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~  227 (248)
                      .++|+++.........++...+..|+.++.++++++.+.+.+++|++||..+||.....+++|+.+..|.+.|+.||.++
T Consensus        94 ~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~  173 (341)
T d1sb8a_          94 YVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVN  173 (341)
T ss_dssp             EEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHHHHH
T ss_pred             ccccccccccccccccCccchhheeehhHHHHHHHHHhcCCceEEEcccceeeCCCCCCCccCCCCCCCCCcchHHHHHH
Confidence            99999986554445567778899999999999999999998899999999999988888999999999999999999999


Q ss_pred             HHHHHHHhhcCCCcEEEEecC
Q 025786          228 EDIILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       228 e~l~~~~~~~~gi~~~~v~Pf  248 (248)
                      |.+++.++++++++++++||+
T Consensus       174 E~~~~~~~~~~~i~~~ilR~~  194 (341)
T d1sb8a_         174 ELYADVFSRCYGFSTIGLRYF  194 (341)
T ss_dssp             HHHHHHHHHHHCCCCEEEEEC
T ss_pred             HHHHHHHHHHhCCCeEEEEec
Confidence            999999999999999999985

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=1.9e-28  Score=200.62  Aligned_cols=162  Identities=23%  Similarity=0.215  Sum_probs=125.3

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~  144 (248)
                      +|++|||||++|||+++|+.|+++|++|++++|+..+.++..+.+.+. ..+.++.++++|++|++++++++++     +
T Consensus         3 GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~-~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G   81 (254)
T d2gdza1           3 GKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQ-FEPQKTLFIQCDVADQQQLRDTFRKVVDHFG   81 (254)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTT-SCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHh-cCCCcEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence            499999999999999999999999999999997543333332222221 1245788999999999999988876     7


Q ss_pred             CCCEEEEcccccccCCCCCCchhhHhhhHHH----HHHHHHHHHHcC---CCEEEEeccceecCCCCCCCCCCCCCCCCC
Q 025786          145 AFDAVMHFAAVAYVGESTLDPLKYYHNITSN----TLVVLESMARHG---VDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (248)
Q Consensus       145 ~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~----~~~ll~~~~~~~---~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (248)
                      ++|+||||||....    .+.++.++.|+.+    ++.+++.|.+++   .++||++||.+++           .+.+..
T Consensus        82 ~iDilVnnAg~~~~----~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~-----------~~~~~~  146 (254)
T d2gdza1          82 RLDILVNNAGVNNE----KNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGL-----------MPVAQQ  146 (254)
T ss_dssp             CCCEEEECCCCCCS----SSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGT-----------SCCTTC
T ss_pred             CcCeeccccccccc----ccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhc-----------cCCCCc
Confidence            89999999997643    3445566666654    556788887653   3689999998775           344557


Q ss_pred             ChHHHHHHHHHHHHHH--Hhhc---CCCcEEEEec
Q 025786          218 NPYGKAKKMAEDIILD--FSKN---SDMAVLQCHR  247 (248)
Q Consensus       218 ~~Y~~sK~a~e~l~~~--~~~~---~gi~~~~v~P  247 (248)
                      .+|++||++.+.|+++  ++.+   +||++++|.|
T Consensus       147 ~~Y~asKaal~~ltrs~ala~e~~~~gIrVN~I~P  181 (254)
T d2gdza1         147 PVYCASKHGIVGFTRSAALAANLMNSGVRLNAICP  181 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEE
T ss_pred             cchHHHHHHHHHHHHHHHHHHHhcCCCEEEEEEEc
Confidence            7899999999999986  4544   7899999998

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=9.5e-28  Score=199.58  Aligned_cols=166  Identities=19%  Similarity=0.149  Sum_probs=132.2

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCC---CcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc---C
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSR---GNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE---N  144 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~---~  144 (248)
                      |+||||||++|||+++|++|+++|++|+.+++..+   ..+.+.+..+++...+.++.++.+|++|.+++.+++++   +
T Consensus         3 kVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~g   82 (285)
T d1jtva_           3 TVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTEG   82 (285)
T ss_dssp             EEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTTS
T ss_pred             CEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhcccc
Confidence            78999999999999999999999998766554333   33334444555555567899999999999999998876   7


Q ss_pred             CCCEEEEcccccccCCCCCCchhhHhh----hHHH----HHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCC
Q 025786          145 AFDAVMHFAAVAYVGESTLDPLKYYHN----ITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (248)
Q Consensus       145 ~iD~li~~Ag~~~~~~~~~~~~~~~~~----~~~~----~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~  216 (248)
                      .+|+||||||........+.+.+.|+.    |+.+    ++.++|.|++++.++||++||.++.           .+.+.
T Consensus        83 ~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g~-----------~~~~~  151 (285)
T d1jtva_          83 RVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGL-----------MGLPF  151 (285)
T ss_dssp             CCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGT-----------SCCTT
T ss_pred             chhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhhc-----------CCCCC
Confidence            899999999987666555555555543    4333    5568999999888999999998775           34455


Q ss_pred             CChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          217 INPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      ..+|++||++.+.|++.++.|   +||++++|.|
T Consensus       152 ~~~Y~asKaal~~l~~~la~El~~~gIrVn~V~P  185 (285)
T d1jtva_         152 NDVYCASKFALEGLCESLAVLLLPFGVHLSLIEC  185 (285)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE
T ss_pred             chHHHHHHHHHHHHHHHHHHHhhccCcEEEEEec
Confidence            778999999999999999988   6899999998

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=6.8e-28  Score=201.41  Aligned_cols=169  Identities=15%  Similarity=0.139  Sum_probs=130.3

Q ss_pred             CCCCceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhc--CCCCceEEEEccCCCHHHHHHHhhc
Q 025786           66 HEEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELF--PEPGRLQFIYADLGDAKAVNKFFSE  143 (248)
Q Consensus        66 ~~~~~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~~Dl~~~~~~~~~~~~  143 (248)
                      ++++ |++|||||++|||+++|+.|+++|++|++++|+..+.++..+.++...  ..+.++.++++|++|++++++++++
T Consensus         9 ~L~g-KvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~   87 (297)
T d1yxma1           9 LLQG-QVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKS   87 (297)
T ss_dssp             TTTT-CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCC-CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHH
Confidence            3455 999999999999999999999999999999975544443333333221  1245789999999999999998876


Q ss_pred             -----CCCCEEEEcccccccCCCCCCchhhHhhh----HHH----HHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCC
Q 025786          144 -----NAFDAVMHFAAVAYVGESTLDPLKYYHNI----TSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITE  210 (248)
Q Consensus       144 -----~~iD~li~~Ag~~~~~~~~~~~~~~~~~~----~~~----~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e  210 (248)
                           +++|+||||||.....+..+.+.+.|+..    +.+    ++.+++.|.+++.++||++||....          
T Consensus        88 ~~~~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~ss~~~~----------  157 (297)
T d1yxma1          88 TLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKA----------  157 (297)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCCTT----------
T ss_pred             HHHHhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhccccccccccccccccc----------
Confidence                 78999999999876665555555555543    333    4457788888777889988764332          


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          211 ETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       211 ~~~~~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                        ..+....|+.||++++.|++.++.+   +||+|++|.|
T Consensus       158 --~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~P  195 (297)
T d1yxma1         158 --GFPLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAP  195 (297)
T ss_dssp             --CCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEE
T ss_pred             --cccccccchhHHHHHHHHHHHHHHHhcccCceEEEeee
Confidence              2334678999999999999999988   4799999998

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=99.95  E-value=1.7e-27  Score=195.23  Aligned_cols=165  Identities=17%  Similarity=0.168  Sum_probs=132.0

Q ss_pred             CCceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc----
Q 025786           68 EGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----  143 (248)
Q Consensus        68 ~~~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~----  143 (248)
                      ++ |+||||||++|||++++++|+++|++|++++|+..+   +.+..+++...+..+.++.+|+++.+++++++++    
T Consensus         5 ~g-K~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~---l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~   80 (258)
T d1ae1a_           5 KG-TTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKE---LDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHV   80 (258)
T ss_dssp             TT-CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHH---HHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CC-CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHH---HHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHH
Confidence            44 999999999999999999999999999999975433   3333344433456788999999999999888765    


Q ss_pred             --CCCCEEEEcccccccCCCCCCchhhHhhhHHH--------HHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCC
Q 025786          144 --NAFDAVMHFAAVAYVGESTLDPLKYYHNITSN--------TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETP  213 (248)
Q Consensus       144 --~~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~--------~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~  213 (248)
                        +.+|+||||||........+.+.+.|+..+..        ++.+++.|.+.+.++||++||.+..           .+
T Consensus        81 ~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~-----------~~  149 (258)
T d1ae1a_          81 FDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGF-----------SA  149 (258)
T ss_dssp             TTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGT-----------SC
T ss_pred             hCCCcEEEeccccccccCccccCCHHHHhhhhhhccccccccccccccccccccccccccccccccc-----------cc
Confidence              46999999999877666665555666544433        4457788888888999999998775           23


Q ss_pred             CCCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          214 QAPINPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       214 ~~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      .+...+|+.+|++.+.|++.++.|   +||++++|.|
T Consensus       150 ~~~~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~P  186 (258)
T d1ae1a_         150 LPSVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAP  186 (258)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE
T ss_pred             cccchhHHHHHHHHHHHHHHHHHhcCcCcEEEEEEee
Confidence            445779999999999999999988   5799999998

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.95  E-value=3.5e-28  Score=203.61  Aligned_cols=166  Identities=19%  Similarity=0.146  Sum_probs=127.0

Q ss_pred             CCCceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCC------CcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHH
Q 025786           67 EEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSR------GNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKF  140 (248)
Q Consensus        67 ~~~~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~------~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~  140 (248)
                      +.+ |++|||||++|||+++|++|+++|++|++.++...      ..+.+.+..+++..   ......+|++|.++++++
T Consensus         5 l~g-KvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~d~~~~~~~~~~   80 (302)
T d1gz6a_           5 FDG-RVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRR---RGGKAVANYDSVEAGEKL   80 (302)
T ss_dssp             CTT-CEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHH---TTCEEEEECCCGGGHHHH
T ss_pred             cCC-CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhh---cccccccccchHHHHHHH
Confidence            455 99999999999999999999999999999987532      12223333333322   334567888888777776


Q ss_pred             hhc-----CCCCEEEEcccccccCCCCCCchhhHhhh----HHH----HHHHHHHHHHcCCCEEEEeccceecCCCCCCC
Q 025786          141 FSE-----NAFDAVMHFAAVAYVGESTLDPLKYYHNI----TSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMP  207 (248)
Q Consensus       141 ~~~-----~~iD~li~~Ag~~~~~~~~~~~~~~~~~~----~~~----~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~  207 (248)
                      +++     +++|+||||||+....+..+.+.+.|+..    +.+    ++.++|.|++++.++||++||.+++-      
T Consensus        81 v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~~~------  154 (302)
T d1gz6a_          81 VKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIY------  154 (302)
T ss_dssp             HHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH------
T ss_pred             HHHHHHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhhcC------
Confidence            654     78999999999977666555555555543    333    45588999988889999999977652      


Q ss_pred             CCCCCCCCCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          208 ITEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       208 ~~e~~~~~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                           +.+....|++||++.+.|++.++.|   +||++++|.|
T Consensus       155 -----~~~~~~~Y~asKaal~~lt~~la~E~~~~gIrVN~I~P  192 (302)
T d1gz6a_         155 -----GNFGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAP  192 (302)
T ss_dssp             -----CCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEE
T ss_pred             -----CCCCcHHHHHHHHHHHHHHHHHHHHHhccCCceeeeCC
Confidence                 3344779999999999999999988   5899999998

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.95  E-value=2.8e-27  Score=199.21  Aligned_cols=175  Identities=25%  Similarity=0.264  Sum_probs=148.7

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li  150 (248)
                      |+||||||||+||++++++|+++||+|++++|......  ...++.+. ...++.++.+|++|.+.+.+.+.....++++
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~--~~~l~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~   77 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDT--RWRLRELG-IEGDIQYEDGDMADACSVQRAVIKAQPQEVY   77 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCC--CHHHHHTT-CGGGEEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCccc--HHHHHHhc-ccCCcEEEEccccChHHhhhhhccccccccc
Confidence            68999999999999999999999999999997543221  22233332 2357899999999999999998887789999


Q ss_pred             EcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCC-CEEEEeccceecCCCCCCCCCCCCCCCCCChHHHHHHHHHH
Q 025786          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV-DTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAED  229 (248)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~-~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e~  229 (248)
                      |+|+..........+.+.+..|..++.++++++++.+. .+|++.||..+||.....+.+|+++..|.++|+.||.++|.
T Consensus        78 ~~a~~~~~~~~~~~~~~~~~~n~~g~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~  157 (321)
T d1rpna_          78 NLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDENTPFYPRSPYGVAKLYGHW  157 (321)
T ss_dssp             ECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHH
T ss_pred             cccccccccccccchHHHHhhhhhchHHHHHHHHHhCCCcccccccchhhcCcccCCCCCCCCCccccChhHHHHHHHHH
Confidence            99987655555567788899999999999999998875 47888888888988888888999999999999999999999


Q ss_pred             HHHHHhhcCCCcEEEEecC
Q 025786          230 IILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       230 l~~~~~~~~gi~~~~v~Pf  248 (248)
                      +++.++.+++++++++|||
T Consensus       158 ~~~~~~~~~~~~~~~lr~~  176 (321)
T d1rpna_         158 ITVNYRESFGLHASSGILF  176 (321)
T ss_dssp             HHHHHHHHHCCCEEEEEEC
T ss_pred             HHHHHHhhcCCcEEEEEEe
Confidence            9999999999999999986

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.95  E-value=9.9e-28  Score=205.87  Aligned_cols=175  Identities=26%  Similarity=0.399  Sum_probs=139.7

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEE-EEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVT-IVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~-~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~l  149 (248)
                      |+||||||||+||++|+++|+++|++|+ ++++......  .+.++.+ ....+++++.+|++|.+.+.++++..++|+|
T Consensus         1 MkILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~--~~~~~~~-~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~V   77 (361)
T d1kewa_           1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGN--LESLSDI-SESNRYNFEHADICDSAEITRIFEQYQPDAV   77 (361)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCC--GGGGTTT-TTCTTEEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcccc--HHHHHhh-hhcCCcEEEEccCCCHHHHHHHHHhCCCCEE
Confidence            4799999999999999999999999755 4554322211  1222222 2245799999999999999999987789999


Q ss_pred             EEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcC---------CCEEEEeccceecCCCCCCC----------CCC
Q 025786          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHG---------VDTLIYSSTCATYGEPEKMP----------ITE  210 (248)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~---------~~~iV~~SS~~~~g~~~~~~----------~~e  210 (248)
                      ||+|+.........++...++.|+.++.+++..+++.+         .++||++||..+||.....+          ..|
T Consensus        78 ihlAa~~~~~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~e  157 (361)
T d1kewa_          78 MHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTE  157 (361)
T ss_dssp             EECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCT
T ss_pred             EECccccchhhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCccccccCCCCccc
Confidence            99999765444455778889999999999999997653         45899999999998654322          235


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHhhcCCCcEEEEecC
Q 025786          211 ETPQAPINPYGKAKKMAEDIILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       211 ~~~~~~~~~Y~~sK~a~e~l~~~~~~~~gi~~~~v~Pf  248 (248)
                      ..+..|.+.|+.||.++|.+++.++++++++++++|||
T Consensus       158 ~~~~~p~s~Yg~sK~~~E~~~~~~~~~~~i~~~~lR~~  195 (361)
T d1kewa_         158 TTAYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCS  195 (361)
T ss_dssp             TSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEEC
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEecC
Confidence            66778899999999999999999999999999999997

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=99.95  E-value=2.6e-27  Score=194.51  Aligned_cols=175  Identities=11%  Similarity=0.081  Sum_probs=128.2

Q ss_pred             CCCCceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc--
Q 025786           66 HEEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE--  143 (248)
Q Consensus        66 ~~~~~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--  143 (248)
                      .+++ |++|||||++|||+++|+.|+++|++|++++|+..+.++..+.+.+.  .+.++.++++|++|++++++++++  
T Consensus         6 ~l~g-K~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~--~g~~~~~~~~Dv~~~~~v~~~~~~~~   82 (260)
T d1h5qa_           6 SFVN-KTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKE--FGVKTKAYQCDVSNTDIVTKTIQQID   82 (260)
T ss_dssp             CCTT-EEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHH--HTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCC-CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHH--hCCceEEEEccCCCHHHHHHHHHHHH
Confidence            3455 99999999999999999999999999999998665544433333221  145789999999999999988875  


Q ss_pred             ---CCCCEEEEcccccccCCCCCCchhhHhh----hHHH----HHHHHHHHHHc-CCCEEEEeccceecCCCCCCCCCCC
Q 025786          144 ---NAFDAVMHFAAVAYVGESTLDPLKYYHN----ITSN----TLVVLESMARH-GVDTLIYSSTCATYGEPEKMPITEE  211 (248)
Q Consensus       144 ---~~iD~li~~Ag~~~~~~~~~~~~~~~~~----~~~~----~~~ll~~~~~~-~~~~iV~~SS~~~~g~~~~~~~~e~  211 (248)
                         +++|+||||||.....+..+.+.+.|+.    |+.+    ++.+++.|.++ ..++|+++||.........    ..
T Consensus        83 ~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~~----~~  158 (260)
T d1h5qa_          83 ADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQS----SL  158 (260)
T ss_dssp             HHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEE----ET
T ss_pred             HHhCCCcEecccccccccCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeecccccccccc----cc
Confidence               7899999999987665555555555543    3333    34467777554 4557777777655421110    00


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          212 TPQAPINPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       212 ~~~~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      .+.+...+|++||++.+.+++.++.|   +||++++|.|
T Consensus       159 ~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~P  197 (260)
T d1h5qa_         159 NGSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSP  197 (260)
T ss_dssp             TEECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE
T ss_pred             ccCccccchhhhhhhHHHHHHHHHHHhchhCeEEeecCC
Confidence            12234568999999999999999987   6899999998

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.95  E-value=1.1e-26  Score=189.44  Aligned_cols=166  Identities=13%  Similarity=0.141  Sum_probs=123.8

Q ss_pred             ceEEEEecCCchhHHHHHHHHH---HCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc---
Q 025786           70 VTHVLVTGGAGYIGSHAALRLL---KDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE---  143 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~---~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~---  143 (248)
                      ||+||||||++|||+++|++|+   ++|++|++++|+..+.+++.+..+    ...++.++++|++|++++++++++   
T Consensus         2 MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~~Dvs~~~~v~~~~~~i~~   77 (248)
T d1snya_           2 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAK----NHSNIHILEIDLRNFDAYDKLVADIEG   77 (248)
T ss_dssp             CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHH----HCTTEEEEECCTTCGGGHHHHHHHHHH
T ss_pred             cCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHh----cCCcEEEEEEEeccHHHHHHHHhhhHH
Confidence            6999999999999999999996   579999999987665544433222    245899999999999998887763   


Q ss_pred             ----CCCCEEEEcccccccCC-CCCCchh----hHhhhHHH----HHHHHHHHHHc-----------CCCEEEEecccee
Q 025786          144 ----NAFDAVMHFAAVAYVGE-STLDPLK----YYHNITSN----TLVVLESMARH-----------GVDTLIYSSTCAT  199 (248)
Q Consensus       144 ----~~iD~li~~Ag~~~~~~-~~~~~~~----~~~~~~~~----~~~ll~~~~~~-----------~~~~iV~~SS~~~  199 (248)
                          +++|+||||||+..... ..+.+.+    .++.|..+    ++.++|.|++.           +.+++|++||...
T Consensus        78 ~~~~~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g  157 (248)
T d1snya_          78 VTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILG  157 (248)
T ss_dssp             HHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGG
T ss_pred             HhhcCCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhcccccccccccccccccccccc
Confidence                67999999999865432 2232233    34445444    44577778754           3579999999765


Q ss_pred             cCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          200 YGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       200 ~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      .-.        ..+.+...+|+.||++...|++.++.+   .||+++.|+|
T Consensus       158 ~~~--------~~~~~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~P  200 (248)
T d1snya_         158 SIQ--------GNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHP  200 (248)
T ss_dssp             CST--------TCCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECC
T ss_pred             ccC--------CCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCC
Confidence            311        123344668999999999999999877   5799999999

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=99.94  E-value=2.1e-26  Score=190.61  Aligned_cols=162  Identities=15%  Similarity=0.164  Sum_probs=123.2

Q ss_pred             CCCceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc---
Q 025786           67 EEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE---  143 (248)
Q Consensus        67 ~~~~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~---  143 (248)
                      +++ |++|||||++|||+++|++|+++|++|++++|+.   +.+.+..++.   +.++..+.+|+++.+++++++++   
T Consensus         3 L~g-K~alITGas~GIG~aia~~la~~Ga~V~i~~r~~---~~l~~~~~~~---~~~~~~~~~Dv~~~~~~~~~~~~~~~   75 (276)
T d1bdba_           3 LKG-EAVLITGGASGLGRALVDRFVAEGAKVAVLDKSA---ERLAELETDH---GDNVLGIVGDVRSLEDQKQAASRCVA   75 (276)
T ss_dssp             TTT-CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH---HHHHHHHHHH---GGGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCC-CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH---HHHHHHHHHc---CCCeeEEecccccHHHHHHHHHHHHH
Confidence            345 9999999999999999999999999999999643   3444444443   35789999999999999988875   


Q ss_pred             --CCCCEEEEcccccccCC-----CCCCchhhHh----hhHHH----HHHHHHHHHHcCCCEEEEeccceecCCCCCCCC
Q 025786          144 --NAFDAVMHFAAVAYVGE-----STLDPLKYYH----NITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPI  208 (248)
Q Consensus       144 --~~iD~li~~Ag~~~~~~-----~~~~~~~~~~----~~~~~----~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~  208 (248)
                        +++|++|||||+.....     ..+..++.|+    .|+.+    ++.++|.|++++ +++|++||...+        
T Consensus        76 ~~g~idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-g~iI~i~S~~~~--------  146 (276)
T d1bdba_          76 RFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASR-GNVIFTISNAGF--------  146 (276)
T ss_dssp             HHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGT--------
T ss_pred             HhCCcccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcC-CCceeeeechhc--------
Confidence              78999999999754322     1222222333    44444    455788888776 688888886654        


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHhhcC--CCcEEEEec
Q 025786          209 TEETPQAPINPYGKAKKMAEDIILDFSKNS--DMAVLQCHR  247 (248)
Q Consensus       209 ~e~~~~~~~~~Y~~sK~a~e~l~~~~~~~~--gi~~~~v~P  247 (248)
                         .+.+...+|++||++.+.|++.++.|+  +|++++|.|
T Consensus       147 ---~~~~~~~~Y~asKaal~~ltr~lA~ela~~IrVN~I~P  184 (276)
T d1bdba_         147 ---YPNGGGPLYTAAKHAIVGLVRELAFELAPYVRVNGVGS  184 (276)
T ss_dssp             ---STTSSCHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEE
T ss_pred             ---cCCCCCchHHHHHHHHHHHHHHHHHHhhcceEEcccCC
Confidence               233446789999999999999999884  499999988

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=7.2e-28  Score=202.75  Aligned_cols=166  Identities=30%  Similarity=0.497  Sum_probs=131.2

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li  150 (248)
                      |+||||||+|+||++++++|+++|++|+++++.........   ... ....++.....|+.+     .++.  ++|+||
T Consensus         2 KKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~---~~~-~~~~~~d~~~~~~~~-----~~~~--~~d~Vi   70 (312)
T d2b69a1           2 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNV---EHW-IGHENFELINHDVVE-----PLYI--EVDQIY   70 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGT---GGG-TTCTTEEEEECCTTS-----CCCC--CCSEEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHH---HHh-cCCCceEEEehHHHH-----HHHc--CCCEEE
Confidence            78999999999999999999999999999987543322211   111 112345555555543     2332  689999


Q ss_pred             EcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCC-----CCCCCCChHHHHHH
Q 025786          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEE-----TPQAPINPYGKAKK  225 (248)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~-----~~~~~~~~Y~~sK~  225 (248)
                      |+|+.........++.+.++.|+.++.++++++++.+. ++|++||.++||.....+++|+     .+..|.++|+.||.
T Consensus        71 hlAa~~~~~~~~~~~~~~~~~Nv~g~~~ll~~~~~~~~-k~I~~SS~~vy~~~~~~~~~e~~~~~~~~~~p~~~Y~~sK~  149 (312)
T d2b69a1          71 HLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA-RLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKR  149 (312)
T ss_dssp             ECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTC-EEEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTTHHHHHHHH
T ss_pred             ECcccCCchhHHhCHHHHHHHHHHHHHHHHHHHHHcCC-cEEEEEChheecCCCCCCCCccccCCCCCCCCccHHHHHHH
Confidence            99997654445567788899999999999999998875 8999999999997666555554     46678899999999


Q ss_pred             HHHHHHHHHhhcCCCcEEEEecC
Q 025786          226 MAEDIILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       226 a~e~l~~~~~~~~gi~~~~v~Pf  248 (248)
                      ++|.+++.+++++|++++++||+
T Consensus       150 ~~E~~~~~~~~~~~~~~~~lR~~  172 (312)
T d2b69a1         150 VAETMCYAYMKQEGVEVRVARIF  172 (312)
T ss_dssp             HHHHHHHHHHHHHCCCEEEEEEC
T ss_pred             HHHHHHHHHHHHhCCcEEEEEee
Confidence            99999999999999999999996

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=99.94  E-value=1.9e-26  Score=194.61  Aligned_cols=173  Identities=27%  Similarity=0.408  Sum_probs=143.4

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEE------EEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRV------TIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSEN  144 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V------~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~  144 (248)
                      |+||||||||+||++++++|+++|++|      +.+++.......  ..+... ....++.++.+|+++.........  
T Consensus         1 MkIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~--~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~~--   75 (322)
T d1r6da_           1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNR--ANLAPV-DADPRLRFVHGDIRDAGLLARELR--   75 (322)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCG--GGGGGG-TTCTTEEEEECCTTCHHHHHHHTT--
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccH--hHhhhh-hcCCCeEEEEeccccchhhhcccc--
Confidence            469999999999999999999999854      444433222111  111222 224579999999999998887665  


Q ss_pred             CCCEEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCCChHHHHH
Q 025786          145 AFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAK  224 (248)
Q Consensus       145 ~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK  224 (248)
                      .+|+|+|+|+..........+.+.++.|+.++.++++.+.+.+.+++|++||..+||.....+++|+.+..|.+.|+.||
T Consensus        76 ~~d~vi~~a~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~I~~Ss~~~yg~~~~~~~~E~~~~~p~~~Y~~sK  155 (322)
T d1r6da_          76 GVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDSGSWTESSPLEPNSPYAASK  155 (322)
T ss_dssp             TCCEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCCSSSCBCTTSCCCCCSHHHHHH
T ss_pred             ccceEEeecccccccccccchHHHhhhhHHHHHHHHHHHHHcCCceEEEeecceeecCCCCCCCCCCCCCCCCCHHHHHH
Confidence            68999999987654444556778889999999999999999998999999999999998888999999999999999999


Q ss_pred             HHHHHHHHHHhhcCCCcEEEEecC
Q 025786          225 KMAEDIILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       225 ~a~e~l~~~~~~~~gi~~~~v~Pf  248 (248)
                      .++|.+++.++++++++++++||+
T Consensus       156 ~~~E~~~~~~~~~~~~~~~~lR~~  179 (322)
T d1r6da_         156 AGSDLVARAYHRTYGLDVRITRCC  179 (322)
T ss_dssp             HHHHHHHHHHHHHHCCCEEEEEEC
T ss_pred             HHHHHHHHHHHHHhCCCEEEEEee
Confidence            999999999999999999999996

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=99.94  E-value=8.4e-27  Score=190.68  Aligned_cols=162  Identities=10%  Similarity=0.135  Sum_probs=126.2

Q ss_pred             CCceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCC-CHHHHHHHhhc---
Q 025786           68 EGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG-DAKAVNKFFSE---  143 (248)
Q Consensus        68 ~~~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-~~~~~~~~~~~---  143 (248)
                      ++ |+||||||++|||+++|++|+++|++|++++|...+.+...+ +... ....++.++.+|++ +.+++++++++   
T Consensus         4 ~g-K~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~-~~~~-~~~~~~~~~~~d~~~~~~~~~~~~~~~~~   80 (254)
T d1sbya1           4 TN-KNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAE-LKAI-NPKVNITFHTYDVTVPVAESKKLLKKIFD   80 (254)
T ss_dssp             TT-CEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHH-HHHH-CTTSEEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred             CC-CEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHH-HHhh-CCCCCEEEEEeecCCCHHHHHHHHHHHHH
Confidence            45 999999999999999999999999999999876554333322 2222 22457889999998 66778777765   


Q ss_pred             --CCCCEEEEcccccccCCCCCCchhhHhhhHHH----HHHHHHHHHHc---CCCEEEEeccceecCCCCCCCCCCCCCC
Q 025786          144 --NAFDAVMHFAAVAYVGESTLDPLKYYHNITSN----TLVVLESMARH---GVDTLIYSSTCATYGEPEKMPITEETPQ  214 (248)
Q Consensus       144 --~~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~----~~~ll~~~~~~---~~~~iV~~SS~~~~g~~~~~~~~e~~~~  214 (248)
                        +++|+||||||...    .+..+..++.|+.+    ++.+++.|.++   ..++||++||.+++           .+.
T Consensus        81 ~~g~iDilvnnAG~~~----~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~-----------~~~  145 (254)
T d1sbya1          81 QLKTVDILINGAGILD----DHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGF-----------NAI  145 (254)
T ss_dssp             HHSCCCEEEECCCCCC----TTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGT-----------SCC
T ss_pred             HcCCCCEEEeCCCCCC----HHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhc-----------cCC
Confidence              78999999999642    34556677777766    44577777654   24789999998776           244


Q ss_pred             CCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          215 APINPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       215 ~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      +.+.+|++||++...|++.++.+   +||+++.|.|
T Consensus       146 ~~~~~Y~asKaal~~~t~~la~el~~~gIrVn~I~P  181 (254)
T d1sbya1         146 HQVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINP  181 (254)
T ss_dssp             TTSHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEE
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhhccccCeEEEEEEe
Confidence            55779999999999999999988   5899999999

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.94  E-value=6.9e-27  Score=191.83  Aligned_cols=165  Identities=19%  Similarity=0.176  Sum_probs=121.9

Q ss_pred             CCCceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc---
Q 025786           67 EEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE---  143 (248)
Q Consensus        67 ~~~~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~---  143 (248)
                      +.| |+||||||++|||+++++.|+++|++|++++++  +.+.+.+..+++...+.++.++++|++|++++++++++   
T Consensus         4 L~G-K~alITGas~GIG~aia~~la~~G~~Vvi~~~~--~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~   80 (259)
T d1ja9a_           4 LAG-KVALTTGAGRGIGRGIAIELGRRGASVVVNYGS--SSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVS   80 (259)
T ss_dssp             TTT-CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESS--CHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCC-CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCC--ChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHH
Confidence            345 999999999999999999999999999987753  22223333334434456899999999999999988876   


Q ss_pred             --CCCCEEEEcccccccCCCCCCchhhHhhhHH----H----HHHHHHHHHHcCCCEEEEeccc-eecCCCCCCCCCCCC
Q 025786          144 --NAFDAVMHFAAVAYVGESTLDPLKYYHNITS----N----TLVVLESMARHGVDTLIYSSTC-ATYGEPEKMPITEET  212 (248)
Q Consensus       144 --~~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~----~----~~~ll~~~~~~~~~~iV~~SS~-~~~g~~~~~~~~e~~  212 (248)
                        +++|+||||||.....+..+.+.+.|+..+.    +    ++.+++.|+++  +++++++|. +.+           .
T Consensus        81 ~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~--g~~iii~s~~~~~-----------~  147 (259)
T d1ja9a_          81 HFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG--GRIILTSSIAAVM-----------T  147 (259)
T ss_dssp             HHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEE--EEEEEECCGGGTC-----------C
T ss_pred             HcCCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcC--Ccccccccccccc-----------c
Confidence              7899999999987666555555555554333    3    33456666443  456666553 333           1


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          213 PQAPINPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       213 ~~~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      +.+....|++||++.+.+++.++.+   +||++++|.|
T Consensus       148 ~~~~~~~Y~asK~al~~l~r~lA~e~~~~gIrvN~I~P  185 (259)
T d1ja9a_         148 GIPNHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAP  185 (259)
T ss_dssp             SCCSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEE
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHHHHhhcCeEEeccCc
Confidence            2344678999999999999999988   5899999998

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.94  E-value=6.1e-27  Score=191.37  Aligned_cols=156  Identities=15%  Similarity=0.169  Sum_probs=119.8

Q ss_pred             EEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----CCC
Q 025786           72 HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NAF  146 (248)
Q Consensus        72 ~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~i  146 (248)
                      ++|||||++|||+++|+.|+++|++|++++|+.+..+++.....         .+.++|++|.+++++++++     +++
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~~---------~~~~~dv~~~~~~~~~~~~~~~~~G~i   72 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAE---------TYPQLKPMSEQEPAELIEAVTSAYGQV   72 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHH---------HCTTSEECCCCSHHHHHHHHHHHHSCC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhhhC---------cEEEeccCCHHHHHHHHHHHHHHcCCC
Confidence            79999999999999999999999999999876544333322211         2346888888888777765     799


Q ss_pred             CEEEEccccccc-CCCCCCchhhHhh----hHHH----HHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCC
Q 025786          147 DAVMHFAAVAYV-GESTLDPLKYYHN----ITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (248)
Q Consensus       147 D~li~~Ag~~~~-~~~~~~~~~~~~~----~~~~----~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (248)
                      |+||||||.... .+..+.+.+.|+.    |+.+    ++.+++.|++++.++||++||.+.+.           +.+..
T Consensus        73 DiLVnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~~-----------~~~~~  141 (252)
T d1zmta1          73 DVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFG-----------PWKEL  141 (252)
T ss_dssp             CEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTS-----------CCTTC
T ss_pred             CEEEECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeeccccccccc-----------ccccc
Confidence            999999997543 3444444455543    3333    55688889888889999999977652           34446


Q ss_pred             ChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          218 NPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      .+|+.||++.+.|++.++.|   +||++++|.|
T Consensus       142 ~~Y~asKaal~~lt~~lA~ela~~gIrVN~I~P  174 (252)
T d1zmta1         142 STYTSARAGACTLANALSKELGEYNIPVFAIGP  174 (252)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCCEEEEEE
T ss_pred             cccccccccHHHHHHHHHHHhcccCcEEEEEec
Confidence            78999999999999999988   5899999998

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.94  E-value=3.5e-26  Score=188.85  Aligned_cols=166  Identities=17%  Similarity=0.178  Sum_probs=123.7

Q ss_pred             CCCceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc---
Q 025786           67 EEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE---  143 (248)
Q Consensus        67 ~~~~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~---  143 (248)
                      +.| |++|||||++|||+++++.|+++|++|++++++.  .+.+.+..+++...+.++.++++|++|++++.+++++   
T Consensus        16 L~g-K~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~--~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~   92 (272)
T d1g0oa_          16 LEG-KVALVTGAGRGIGREMAMELGRRGCKVIVNYANS--TESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVK   92 (272)
T ss_dssp             CTT-CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSC--HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCC-CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCc--hHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHH
Confidence            345 9999999999999999999999999999998632  2233333334434456899999999999999998876   


Q ss_pred             --CCCCEEEEcccccccCCCCCCchhhHhhh----HHHH----HHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCC
Q 025786          144 --NAFDAVMHFAAVAYVGESTLDPLKYYHNI----TSNT----LVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETP  213 (248)
Q Consensus       144 --~~iD~li~~Ag~~~~~~~~~~~~~~~~~~----~~~~----~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~  213 (248)
                        +++|++|||||.....+..+...+.|+..    +.+.    +.+++.|.+  .+++++++|.....          .+
T Consensus        93 ~~g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~--~g~~i~i~s~~~~~----------~~  160 (272)
T d1g0oa_          93 IFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEI--GGRLILMGSITGQA----------KA  160 (272)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCT--TCEEEEECCGGGTC----------SS
T ss_pred             HhCCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeecccccccccc--cccccccccccccc----------cc
Confidence              78999999999876655554444444443    3333    335555544  35778877754321          13


Q ss_pred             CCCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          214 QAPINPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       214 ~~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      .+....|+.||++.+.+++.++.+   +||+|++|.|
T Consensus       161 ~~~~~~Y~asKaal~~ltk~lA~e~~~~gIrVN~I~P  197 (272)
T d1g0oa_         161 VPKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAP  197 (272)
T ss_dssp             CSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEE
T ss_pred             ccchhhHHHHHHHHHHHHHHHHHHhchhCeEEEEEcc
Confidence            344667999999999999999988   5899999998

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.94  E-value=2.1e-26  Score=196.18  Aligned_cols=172  Identities=25%  Similarity=0.363  Sum_probs=137.4

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEE--EEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCC
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVT--IVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFD  147 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~--~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD  147 (248)
                      ||+||||||||+||++++++|+++|++|.  ++++......  .......  ...++.++.+|++|.+.+.++++  ..|
T Consensus         2 ~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~--~~~~~~~--~~~~i~~~~~Di~d~~~~~~~~~--~~~   75 (346)
T d1oc2a_           2 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGN--KANLEAI--LGDRVELVVGDIADAELVDKLAA--KAD   75 (346)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCC--GGGTGGG--CSSSEEEEECCTTCHHHHHHHHT--TCS
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCcccc--HHHHHHh--hcCCeEEEEccCCCHHHHHHHHh--hhh
Confidence            69999999999999999999999998654  4443222211  1111222  13579999999999999999987  579


Q ss_pred             EEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCC------------CCCCCCCCCCCC
Q 025786          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEP------------EKMPITEETPQA  215 (248)
Q Consensus       148 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~------------~~~~~~e~~~~~  215 (248)
                      .++|+|+.........++.+.++.|+.++.+++..+.+.+ .++|++||..+||..            ....++|..+..
T Consensus        76 ~v~~~a~~~~~~~~~~~~~~~~~~N~~g~~nll~~~~~~~-~k~i~~ss~~vyg~~~~~~~~~~~~~~~~~~~~e~~~~~  154 (346)
T d1oc2a_          76 AIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYD-IRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYN  154 (346)
T ss_dssp             EEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHT-CEEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCC
T ss_pred             hhhhhhhcccccchhhCcccceeeehHhHHhhhhhhcccc-ccccccccceEecccCccccccccccCcccccccCCCCC
Confidence            9999998765544445677889999999999999998887 489999999999742            123456677788


Q ss_pred             CCChHHHHHHHHHHHHHHHhhcCCCcEEEEecC
Q 025786          216 PINPYGKAKKMAEDIILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~~~~~gi~~~~v~Pf  248 (248)
                      |.+.|+.||.++|.+++.++++++++++++|||
T Consensus       155 p~s~Y~~sK~~~E~~~~~~~~~~~i~~~ilR~~  187 (346)
T d1oc2a_         155 PSSPYSSTKAASDLIVKAWVRSFGVKATISNCS  187 (346)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEEC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHcCCCEEEEeec
Confidence            899999999999999999999999999999996

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=1.3e-25  Score=185.09  Aligned_cols=166  Identities=16%  Similarity=0.193  Sum_probs=125.9

Q ss_pred             CCCceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc---
Q 025786           67 EEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE---  143 (248)
Q Consensus        67 ~~~~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~---  143 (248)
                      ++| |++||||||+|||+++|++|+++|++|++++|+..+.++..+.....  .+..+..+.+|+.+.+++....+.   
T Consensus        12 L~G-K~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~--~~~~~~~~~~d~~~~~~~~~~~~~~~~   88 (269)
T d1xu9a_          12 LQG-KKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLEL--GAASAHYIAGTMEDMTFAEQFVAQAGK   88 (269)
T ss_dssp             GTT-CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH--TCSEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCC-CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhh--hcccchhhhhhhhhHHHHHHHHHHHHH
Confidence            345 99999999999999999999999999999997544333333222222  245788899999999888776654   


Q ss_pred             --CCCCEEEEcccccccCCCCCCchhhHh----hhHHH----HHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCC
Q 025786          144 --NAFDAVMHFAAVAYVGESTLDPLKYYH----NITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETP  213 (248)
Q Consensus       144 --~~iD~li~~Ag~~~~~~~~~~~~~~~~----~~~~~----~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~  213 (248)
                        +.+|+++||||........+.+.+.+.    .|+.+    ++.++|.|++.+ ++||++||.+++           .+
T Consensus        89 ~~g~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~-G~ii~isS~~~~-----------~~  156 (269)
T d1xu9a_          89 LMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSN-GSIVVVSSLAGK-----------VA  156 (269)
T ss_dssp             HHTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEEEGGGT-----------SC
T ss_pred             HhCCccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhcC-CcceEeccchhc-----------CC
Confidence              689999999998765554444444443    33333    555888887654 799999997765           34


Q ss_pred             CCCCChHHHHHHHHHHHHHHHhhc-----CCCcEEEEec
Q 025786          214 QAPINPYGKAKKMAEDIILDFSKN-----SDMAVLQCHR  247 (248)
Q Consensus       214 ~~~~~~Y~~sK~a~e~l~~~~~~~-----~gi~~~~v~P  247 (248)
                      .+...+|+.||++.+.|+++++.|     .||+++.|+|
T Consensus       157 ~p~~~~Y~asKaal~~~~~~La~El~~~~~~I~V~~v~P  195 (269)
T d1xu9a_         157 YPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVL  195 (269)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEE
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHHhhhcCCCEEEEEEec
Confidence            555789999999999999999977     4699999998

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.94  E-value=2.1e-26  Score=188.87  Aligned_cols=166  Identities=14%  Similarity=0.068  Sum_probs=123.2

Q ss_pred             ceEEEEecCCchhHHHHHHHHHH---CCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc---
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLK---DSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE---  143 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~---~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~---  143 (248)
                      +|+++||||++|||+++|++|++   +|++|++++|+....+++.+.+.... .+.++.++++|++|+++++++++.   
T Consensus         6 gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~-~~~~~~~~~~Dvs~~~~v~~l~~~~~~   84 (259)
T d1oaaa_           6 CAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQ-PDLKVVLAAADLGTEAGVQRLLSAVRE   84 (259)
T ss_dssp             SEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHC-TTSEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhc-CCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            39999999999999999999986   79999999975444333333333322 245789999999999999888743   


Q ss_pred             ------CCCCEEEEcccccccC---CCCCCchhh----HhhhHHHH----HHHHHHHHHcC--CCEEEEeccceecCCCC
Q 025786          144 ------NAFDAVMHFAAVAYVG---ESTLDPLKY----YHNITSNT----LVVLESMARHG--VDTLIYSSTCATYGEPE  204 (248)
Q Consensus       144 ------~~iD~li~~Ag~~~~~---~~~~~~~~~----~~~~~~~~----~~ll~~~~~~~--~~~iV~~SS~~~~g~~~  204 (248)
                            +.+|++|||||.....   ...+.+.+.    ++.|+.+.    +.+++.|++++  .++||++||.+.+    
T Consensus        85 ~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~----  160 (259)
T d1oaaa_          85 LPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCAL----  160 (259)
T ss_dssp             SCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGT----
T ss_pred             hhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCccccccccccccc----
Confidence                  3678999999975432   223333333    34454443    34566665554  3689999998775    


Q ss_pred             CCCCCCCCCCCCCChHHHHHHHHHHHHHHHhhc-CCCcEEEEec
Q 025786          205 KMPITEETPQAPINPYGKAKKMAEDIILDFSKN-SDMAVLQCHR  247 (248)
Q Consensus       205 ~~~~~e~~~~~~~~~Y~~sK~a~e~l~~~~~~~-~gi~~~~v~P  247 (248)
                             .+.+...+|++||++.+.|++.++.| .||++++|.|
T Consensus       161 -------~~~~~~~~Y~asKaal~~lt~~la~e~~gIrVn~v~P  197 (259)
T d1oaaa_         161 -------QPYKGWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAP  197 (259)
T ss_dssp             -------SCCTTCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEEC
T ss_pred             -------CCCccchHHHHHHHHHHHHHHHHHhCCCCCEEEEEEc
Confidence                   34555789999999999999999987 6899999998

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=9.2e-27  Score=192.70  Aligned_cols=174  Identities=17%  Similarity=0.124  Sum_probs=123.4

Q ss_pred             CceEEEEecCCchhHHHHHHHHHHC-CCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc----
Q 025786           69 GVTHVLVTGGAGYIGSHAALRLLKD-SYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----  143 (248)
Q Consensus        69 ~~k~vlITGasg~IG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~----  143 (248)
                      |++++|||||++|||+++|++|+++ |++|++++|+..+.++..+   ++.....++.++++|++|.+++++++++    
T Consensus         2 g~rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~---~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~   78 (275)
T d1wmaa1           2 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQ---QLQAEGLSPRFHQLDIDDLQSIRALRDFLRKE   78 (275)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHH---HHHHTTCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCeEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH---HHHhcCCcEEEEEEecCCHHHHHHHHHHHHHh
Confidence            4467799999999999999999986 8999999976544444333   3333356789999999999999988776    


Q ss_pred             -CCCCEEEEcccccccCCCCCCchhhH----hhhHHHHHH----HHHHHHHcCCCEEEEeccceecCC-CCCC-------
Q 025786          144 -NAFDAVMHFAAVAYVGESTLDPLKYY----HNITSNTLV----VLESMARHGVDTLIYSSTCATYGE-PEKM-------  206 (248)
Q Consensus       144 -~~iD~li~~Ag~~~~~~~~~~~~~~~----~~~~~~~~~----ll~~~~~~~~~~iV~~SS~~~~g~-~~~~-------  206 (248)
                       +++|+||||||+.......+...+.|    +.|+.++..    ++|.|++  .++||++||...... ....       
T Consensus        79 ~g~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~--~g~ivnisS~~~~~~~~~~~~y~~~k~  156 (275)
T d1wmaa1          79 YGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKP--QGRVVNVSSIMSVRALKSCSPELQQKF  156 (275)
T ss_dssp             HSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEECCHHHHHHHHTSCHHHHHHH
T ss_pred             cCCcEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cCCcccccccceeccccccchhhhhhh
Confidence             78999999999876555444444433    445555444    4555533  369999999754310 0000       


Q ss_pred             ----------------------CCCCCCCCCCCChHHHHHHHHHHHHHHHhhc-------CCCcEEEEec
Q 025786          207 ----------------------PITEETPQAPINPYGKAKKMAEDIILDFSKN-------SDMAVLQCHR  247 (248)
Q Consensus       207 ----------------------~~~e~~~~~~~~~Y~~sK~a~e~l~~~~~~~-------~gi~~~~v~P  247 (248)
                                            ......+..+...|+.||++...+++.++.+       .||++++++|
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~P  226 (275)
T d1wmaa1         157 RSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCP  226 (275)
T ss_dssp             HCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEEC
T ss_pred             cccccchhhhccccccchhcccccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEec
Confidence                                  0001123345678999999999999887766       3899999999

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=99.94  E-value=1.8e-26  Score=187.34  Aligned_cols=162  Identities=22%  Similarity=0.241  Sum_probs=118.5

Q ss_pred             CCCceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc---
Q 025786           67 EEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE---  143 (248)
Q Consensus        67 ~~~~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~---  143 (248)
                      +.+ |++|||||++|||+++|++|+++|++|++++|+.   +.+.+..+++   +.++.++++|+++++++++++++   
T Consensus         3 l~g-K~alItGas~GIG~aia~~l~~~G~~V~~~~r~~---~~~~~~~~~~---~~~~~~~~~Dls~~~~i~~~~~~i~~   75 (241)
T d2a4ka1           3 LSG-KTILVTGAASGIGRAALDLFAREGASLVAVDREE---RLLAEAVAAL---EAEAIAVVADVSDPKAVEAVFAEALE   75 (241)
T ss_dssp             TTT-CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH---HHHHHHHHTC---CSSEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCC-CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH---HHHHHHHHHc---CCceEEEEecCCCHHHHHHHHHHHHH
Confidence            345 9999999999999999999999999999999643   3344444443   45788999999999999998876   


Q ss_pred             --CCCCEEEEcccccccCCCCCCchhhHhhhHH----HHHHHHHHHHH--cCCCEEEEeccceecCCCCCCCCCCCCCCC
Q 025786          144 --NAFDAVMHFAAVAYVGESTLDPLKYYHNITS----NTLVVLESMAR--HGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (248)
Q Consensus       144 --~~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~----~~~~ll~~~~~--~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~  215 (248)
                        +++|+||||||.....+..+.+.+.|+..+.    +...+...+..  .+.+.++++||.+..            +.+
T Consensus        76 ~~g~iDiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~a~~------------~~~  143 (241)
T d2a4ka1          76 EFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGL------------GAF  143 (241)
T ss_dssp             HHSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTC------------CHH
T ss_pred             HhCCccEeccccccccccchhhhhccccccccccccccccccccccccccccccceeeccccccc------------ccc
Confidence              7899999999987666655555555554433    33333333222  233466666665432            223


Q ss_pred             CCChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          216 PINPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      ....|+.+|++.+.|++.++.|   +||++++|.|
T Consensus       144 ~~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~P  178 (241)
T d2a4ka1         144 GLAHYAAGKLGVVGLARTLALELARKGVRVNVLLP  178 (241)
T ss_dssp             HHHHHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEE
T ss_pred             CccccchhhHHHHHHHHHHHHHHhHhCCEEeeecc
Confidence            3568999999999999999988   5799999998

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.94  E-value=6.9e-26  Score=183.08  Aligned_cols=154  Identities=16%  Similarity=0.162  Sum_probs=119.0

Q ss_pred             CCceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-CCC
Q 025786           68 EGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-NAF  146 (248)
Q Consensus        68 ~~~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-~~i  146 (248)
                      ++ |++|||||++|||+++|+.|+++|++|++++|+.   +    .+++.     ...++.+|+++.  ++.++++ +++
T Consensus         3 kg-K~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~---~----~l~~~-----~~~~~~~Dv~~~--~~~~~~~~g~i   67 (234)
T d1o5ia_           3 RD-KGVLVLAASRGIGRAVADVLSQEGAEVTICARNE---E----LLKRS-----GHRYVVCDLRKD--LDLLFEKVKEV   67 (234)
T ss_dssp             TT-CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCH---H----HHHHT-----CSEEEECCTTTC--HHHHHHHSCCC
T ss_pred             CC-CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCH---H----HHHhc-----CCcEEEcchHHH--HHHHHHHhCCC
Confidence            44 9999999999999999999999999999999642   1    12222     245688999863  5555555 689


Q ss_pred             CEEEEcccccccCCCCCCchhhHhhhHH----H----HHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCCC
Q 025786          147 DAVMHFAAVAYVGESTLDPLKYYHNITS----N----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPIN  218 (248)
Q Consensus       147 D~li~~Ag~~~~~~~~~~~~~~~~~~~~----~----~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~  218 (248)
                      |+||||||.....+..+.+.+.|+..+.    +    ++.+++.|++++.++||++||....           .+.+...
T Consensus        68 D~lVnnAG~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~~-----------~~~~~~~  136 (234)
T d1o5ia_          68 DILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVI-----------SPIENLY  136 (234)
T ss_dssp             SEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT-----------SCCTTBH
T ss_pred             cEEEecccccCCcchhhhhhHHHHHHhhhhhhhhhhhhhccccccccccccccccccccccc-----------ccccccc
Confidence            9999999986655555555555554333    3    5568888888888899999997665           2444567


Q ss_pred             hHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          219 PYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       219 ~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      .|+.||++.+.|++.++.|   +||++++|.|
T Consensus       137 ~Y~asKaal~~ltk~lA~ela~~gIrVN~I~P  168 (234)
T d1o5ia_         137 TSNSARMALTGFLKTLSFEVAPYGITVNCVAP  168 (234)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE
T ss_pred             cchhHHHHHHHHHHHHHHHhcccCeEEeeccc
Confidence            8999999999999999988   5899999998

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.93  E-value=3.5e-26  Score=193.65  Aligned_cols=177  Identities=22%  Similarity=0.239  Sum_probs=138.4

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCC--cchhhhhhhhh-cCCCCceEEEEccCCCHHHHHHHhhcCCCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRG--NIGAVKVLQEL-FPEPGRLQFIYADLGDAKAVNKFFSENAFD  147 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~--~~~~~~~~~~~-~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD  147 (248)
                      |++|||||||+||++++++|+++||+|++++|....  ........... ......+.++.+|+++.+++.+.++..++|
T Consensus         2 k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~D   81 (339)
T d1n7ha_           2 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKPD   81 (339)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhhccc
Confidence            799999999999999999999999999999985431  11111111100 012346889999999999999998877899


Q ss_pred             EEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHc-----CCCEEEEeccceecCCCCCCCCCCCCCCCCCChHHH
Q 025786          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARH-----GVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGK  222 (248)
Q Consensus       148 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~-----~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~  222 (248)
                      +|||+|+........+.+...+..|..++.+++.++++.     ...++++.||...++.. ..+++|+.+..|.+.|+.
T Consensus        82 ~Vih~Aa~~~~~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~~-~~~~~E~~~~~p~~~Y~~  160 (339)
T d1n7ha_          82 EVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGST-PPPQSETTPFHPRSPYAA  160 (339)
T ss_dssp             EEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTS-CSSBCTTSCCCCCSHHHH
T ss_pred             hhhhccccccccccccCccccccccccccchhhhhhhhcccccccceeeeecccceecccC-CCCCCCCCCCCCcchhhH
Confidence            999999976544444577788888888888888887643     23467777777766543 356899999999999999


Q ss_pred             HHHHHHHHHHHHhhcCCCcEEEEecC
Q 025786          223 AKKMAEDIILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       223 sK~a~e~l~~~~~~~~gi~~~~v~Pf  248 (248)
                      ||.++|.++..++++++++++++|||
T Consensus       161 sK~~~E~~~~~~~~~~~~~~~ilR~~  186 (339)
T d1n7ha_         161 SKCAAHWYTVNYREAYGLFACNGILF  186 (339)
T ss_dssp             HHHHHHHHHHHHHHHHCCEEEEEEEC
T ss_pred             HHHHHHHHHHHHHHHhCCCEEEEEEc
Confidence            99999999999999999999999996

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=99.93  E-value=2.3e-26  Score=193.10  Aligned_cols=155  Identities=17%  Similarity=0.223  Sum_probs=130.4

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li  150 (248)
                      |+||||||||+||++|+++|+++|+.|+++++.  +                     ++|+.|.+.+.++++...+|.++
T Consensus         3 kkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~--~---------------------~~~~~~~~~~~~~~~~~~~d~v~   59 (315)
T d1e6ua_           3 QRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTR--D---------------------ELNLLDSRAVHDFFASERIDQVY   59 (315)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTCTTEEEECCCT--T---------------------TCCTTCHHHHHHHHHHHCCSEEE
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCc--h---------------------hccccCHHHHHHHHhhcCCCEEE
Confidence            789999999999999999999999998876521  0                     25899999999999877899999


Q ss_pred             EcccccccC-CCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCC-----CCCChHHHHH
Q 025786          151 HFAAVAYVG-ESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQ-----APINPYGKAK  224 (248)
Q Consensus       151 ~~Ag~~~~~-~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~-----~~~~~Y~~sK  224 (248)
                      |+|+..... .....+.+.+.+|+.+|.+++.++.+.+.+++||+||.++||.....+++|+.+.     ++.++|+.||
T Consensus        60 ~~a~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~v~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~~~~~~Y~~sK  139 (315)
T d1e6ua_          60 LAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAK  139 (315)
T ss_dssp             ECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHHHHHHH
T ss_pred             EcchhccccccchhhHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCceEcCCCCCCCccCCccccCCCCCCCCHHHHHH
Confidence            999764321 1234556678899999999999999999999999999999998777777776543     3345799999


Q ss_pred             HHHHHHHHHHhhcCCCcEEEEecC
Q 025786          225 KMAEDIILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       225 ~a~e~l~~~~~~~~gi~~~~v~Pf  248 (248)
                      .++|++++.+.+++|++++++||+
T Consensus       140 ~~~E~~~~~~~~~~gl~~~ilR~~  163 (315)
T d1e6ua_         140 IAGIKLCESYNRQYGRDYRSVMPT  163 (315)
T ss_dssp             HHHHHHHHHHHHHHCCEEEEEEEC
T ss_pred             HHHHHHHHHHHHHhCCCEEEEeec
Confidence            999999999999999999999985

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.93  E-value=1.5e-25  Score=191.83  Aligned_cols=170  Identities=20%  Similarity=0.243  Sum_probs=138.0

Q ss_pred             CCCceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCC
Q 025786           67 EEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAF  146 (248)
Q Consensus        67 ~~~~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~i  146 (248)
                      ..+ |+|||||||||||++|+++|+++|++|+++++......  ..   .    .....+..+|+.+.+.+.++++  ++
T Consensus        13 ~~n-MKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~--~~---~----~~~~~~~~~D~~~~~~~~~~~~--~~   80 (363)
T d2c5aa1          13 SEN-LKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHM--TE---D----MFCDEFHLVDLRVMENCLKVTE--GV   80 (363)
T ss_dssp             TSC-CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSS--CG---G----GTCSEEEECCTTSHHHHHHHHT--TC
T ss_pred             CCC-CEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccch--hh---h----cccCcEEEeechhHHHHHHHhh--cC
Confidence            355 67999999999999999999999999999986433211  11   1    1245778899999999988876  68


Q ss_pred             CEEEEcccccccCC-CCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCCCCCC-------CCCCCCCCCC
Q 025786          147 DAVMHFAAVAYVGE-STLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPI-------TEETPQAPIN  218 (248)
Q Consensus       147 D~li~~Ag~~~~~~-~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~-------~e~~~~~~~~  218 (248)
                      |+|||+|+...... ....+...+..|..++.+++.++.+.+.+++|++||..+|+.....+.       .|..+..|.+
T Consensus        81 d~Vih~a~~~~~~~~~~~~~~~~~~~n~~gt~~ll~~~~~~~vk~~i~~SS~~~~~~~~~~~~~~~~~~~~e~~~~~p~~  160 (363)
T d2c5aa1          81 DHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQD  160 (363)
T ss_dssp             SEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCSS
T ss_pred             CeEeecccccccccccccccccccccccchhhHHHHhHHhhCccccccccccccccccccccccccccccccCCcCCCCC
Confidence            99999998654322 245666778889999999999999999999999999999986544333       3445677899


Q ss_pred             hHHHHHHHHHHHHHHHhhcCCCcEEEEecC
Q 025786          219 PYGKAKKMAEDIILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       219 ~Y~~sK~a~e~l~~~~~~~~gi~~~~v~Pf  248 (248)
                      +|+.||.++|.+++.+.+++|++++++||+
T Consensus       161 ~Yg~sK~~~E~~~~~~~~~~gl~~~ilR~~  190 (363)
T d2c5aa1         161 AFGLEKLATEELCKHYNKDFGIECRIGRFH  190 (363)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCCEEEEEEEC
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCCEEEEEee
Confidence            999999999999999999999999999996

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=1.7e-25  Score=181.96  Aligned_cols=162  Identities=16%  Similarity=0.151  Sum_probs=125.7

Q ss_pred             CCCceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-CC
Q 025786           67 EEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-NA  145 (248)
Q Consensus        67 ~~~~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-~~  145 (248)
                      +.+ |++|||||++|||+++++.|+++|++|++++|+..   .+.+. .+    ...+....+|+.+.+.++...+. ++
T Consensus         4 l~g-K~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~---~l~~~-~~----~~~~~~~~~d~~~~~~~~~~~~~~~~   74 (245)
T d2ag5a1           4 LDG-KVIILTAAAQGIGQAAALAFAREGAKVIATDINES---KLQEL-EK----YPGIQTRVLDVTKKKQIDQFANEVER   74 (245)
T ss_dssp             TTT-CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHH---HHGGG-GG----STTEEEEECCTTCHHHHHHHHHHCSC
T ss_pred             CCC-CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHH---HHHHH-Hh----ccCCceeeeecccccccccccccccc
Confidence            345 99999999999999999999999999999997432   22222 11    23577889999999888887776 78


Q ss_pred             CCEEEEcccccccCCCCCCchhhHhhhHH----H----HHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCC
Q 025786          146 FDAVMHFAAVAYVGESTLDPLKYYHNITS----N----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (248)
Q Consensus       146 iD~li~~Ag~~~~~~~~~~~~~~~~~~~~----~----~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~  217 (248)
                      +|+||||||.....+..+.+.+.|+..+.    +    ++.+++.|.+.+.++||++||....          ..+.+..
T Consensus        75 id~lVn~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~----------~~~~~~~  144 (245)
T d2ag5a1          75 LDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASS----------VKGVVNR  144 (245)
T ss_dssp             CSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTT----------TBCCTTB
T ss_pred             ceeEEecccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeechhhc----------cCCccch
Confidence            99999999987766555555555554433    3    4557888888888899999986542          0234456


Q ss_pred             ChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          218 NPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      .+|+.||++.+.+++.++.|   +||++++|.|
T Consensus       145 ~~Y~~sKaal~~l~r~lA~e~~~~gIrvN~I~P  177 (245)
T d2ag5a1         145 CVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCP  177 (245)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEee
Confidence            78999999999999999988   5899999998

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=3.2e-25  Score=188.56  Aligned_cols=176  Identities=37%  Similarity=0.631  Sum_probs=142.4

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcc------hhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNI------GAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSEN  144 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~------~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~  144 (248)
                      |+||||||||+||++|+++|+++|++|+++|+..+...      ...+..+...  ..++.++++|++|.+.+.+++...
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~l~~~~~~~   80 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELT--GRSVEFEEMDILDQGALQRLFKKY   80 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHH--TCCCEEEECCTTCHHHHHHHHHHC
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHhc--CCCcEEEEeecccccccccccccc
Confidence            78999999999999999999999999999986433211      1122222222  357899999999999999999887


Q ss_pred             CCCEEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCCCCCCC-CCCCCCCCChHHHH
Q 025786          145 AFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPIT-EETPQAPINPYGKA  223 (248)
Q Consensus       145 ~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~-e~~~~~~~~~Y~~s  223 (248)
                      .+|+++|+|+.........++.+.++.|+.++.+++.++++.+.+++|++||..+|+........ +.....+.++|+.+
T Consensus        81 ~~~~i~h~Aa~~~~~~~~~~p~~~~~~Nv~gt~~l~~~~~~~~v~~~i~~ss~~~~~~~~~~~~~~~~~~~~~~~~Y~~~  160 (346)
T d1ek6a_          81 SFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKS  160 (346)
T ss_dssp             CEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSSHHHHH
T ss_pred             ccccccccccccCcHhhHhCHHHHHHhhhcccccccchhhhcCcccccccccceeeeccccccccccccccccCChHHHH
Confidence            88999999997655445556788899999999999999999999999999999999866544333 33345677899999


Q ss_pred             HHHHHHHHHHHhhc-CCCcEEEEecC
Q 025786          224 KKMAEDIILDFSKN-SDMAVLQCHRF  248 (248)
Q Consensus       224 K~a~e~l~~~~~~~-~gi~~~~v~Pf  248 (248)
                      |..+|..++.+++. .+++.+++|||
T Consensus       161 k~~~e~~~~~~~~~~~~~~~~~lR~~  186 (346)
T d1ek6a_         161 KFFIEEMIRDLCQADKTWNAVLLRYF  186 (346)
T ss_dssp             HHHHHHHHHHHHHHCTTCEEEEEEEC
T ss_pred             HHHHHHHHHHHHHhccCCceEEEeec
Confidence            99999999998775 68999999986

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=99.93  E-value=2.4e-25  Score=185.71  Aligned_cols=168  Identities=15%  Similarity=0.136  Sum_probs=120.9

Q ss_pred             CCCCceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc--
Q 025786           66 HEEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE--  143 (248)
Q Consensus        66 ~~~~~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--  143 (248)
                      .++| |++|||||++|||+++|++|+++|++|++++|+..+.++..+.+...  .+.++.++++|+++.++++++++.  
T Consensus        22 ~l~g-K~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~--~g~~~~~~~~D~~~~~~v~~~~~~~~   98 (294)
T d1w6ua_          22 SFQG-KVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQ--TGNKVHAIQCDVRDPDMVQNTVSELI   98 (294)
T ss_dssp             TTTT-CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH--HSSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCC-CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHh--cCCceEEEEecccChHHHHHHhhhhh
Confidence            3455 99999999999999999999999999999997544333333333222  245788999999999999887765  


Q ss_pred             ---CCCCEEEEcccccccCCCCCCchhhHhhhH----HHH----HHHHHHHHH-cCCCEEEEeccceecCCCCCCCCCCC
Q 025786          144 ---NAFDAVMHFAAVAYVGESTLDPLKYYHNIT----SNT----LVVLESMAR-HGVDTLIYSSTCATYGEPEKMPITEE  211 (248)
Q Consensus       144 ---~~iD~li~~Ag~~~~~~~~~~~~~~~~~~~----~~~----~~ll~~~~~-~~~~~iV~~SS~~~~g~~~~~~~~e~  211 (248)
                         +++|+||||||............+.+...+    ...    ...++.+.. ...+.++++||.+...          
T Consensus        99 ~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~----------  168 (294)
T d1w6ua_          99 KVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAET----------  168 (294)
T ss_dssp             HHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHH----------
T ss_pred             hhccccchhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhh----------
Confidence               789999999998765544443333333322    221    222333333 3455677778766542          


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          212 TPQAPINPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       212 ~~~~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                       +.+...+|+.||++.+.|++.++.+   +||+|++|.|
T Consensus       169 -~~~~~~~YsasKaal~~ltk~lA~ela~~gIrVN~I~P  206 (294)
T d1w6ua_         169 -GSGFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQP  206 (294)
T ss_dssp             -CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE
T ss_pred             -cccccchHHHHHHHHHHHHHHHHHHHhHhCeEEEEEcc
Confidence             2334668999999999999999988   6899999998

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.93  E-value=1.3e-25  Score=194.25  Aligned_cols=178  Identities=26%  Similarity=0.276  Sum_probs=133.9

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcc-------------hhhhhhhhhc-CCCCceEEEEccCCCHHH
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNI-------------GAVKVLQELF-PEPGRLQFIYADLGDAKA  136 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~-------------~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~  136 (248)
                      |+||||||||+||++++++|+++||+|+++|+..++..             ...+.+.... ..+.+++++++|++|.+.
T Consensus         2 ~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~   81 (393)
T d1i24a_           2 SRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFEF   81 (393)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHHH
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCCCHHH
Confidence            88999999999999999999999999999974321110             1111111100 013478999999999999


Q ss_pred             HHHHhhcCCCCEEEEcccccccCCCC---CCchhhHhhhHHHHHHHHHHHHHcCCC-EEEEeccceecCCCCCCC-----
Q 025786          137 VNKFFSENAFDAVMHFAAVAYVGEST---LDPLKYYHNITSNTLVVLESMARHGVD-TLIYSSTCATYGEPEKMP-----  207 (248)
Q Consensus       137 ~~~~~~~~~iD~li~~Ag~~~~~~~~---~~~~~~~~~~~~~~~~ll~~~~~~~~~-~iV~~SS~~~~g~~~~~~-----  207 (248)
                      ++++++..++|+|||+|+........   ..+...+..|+.+|.++++.+++.+.. ++++.||...|+......     
T Consensus        82 l~~~~~~~~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~~~~  161 (393)
T d1i24a_          82 LAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNIDIEEGYI  161 (393)
T ss_dssp             HHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCSSCBCSSEE
T ss_pred             HHHHHHhhcchheeccccccccccccccccccccccccccccccHHHHHHHHhccccceeeccccccccccccccccccc
Confidence            99999877899999999975433322   224456788999999999999987754 677788888876443210     


Q ss_pred             -C-------CCCCCCCCCChHHHHHHHHHHHHHHHhhcCCCcEEEEecC
Q 025786          208 -I-------TEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       208 -~-------~e~~~~~~~~~Y~~sK~a~e~l~~~~~~~~gi~~~~v~Pf  248 (248)
                       .       ++..+..|.+.|+.||.++|.+++.++++++++++++||+
T Consensus       162 ~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~~l~~~~lR~~  210 (393)
T d1i24a_         162 TITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQG  210 (393)
T ss_dssp             EEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEEC
T ss_pred             cccccccccccccccccccHHHHHhhhhcccccccccccceeeeecccc
Confidence             0       1223567788999999999999999999999999999985

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.93  E-value=4.3e-25  Score=180.89  Aligned_cols=165  Identities=18%  Similarity=0.173  Sum_probs=131.5

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC-EEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc----CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~----~~  145 (248)
                      +++|||||+||||++++++|+++|+ +|++++|+..+.+...+.++++...+.++.++.+|++|.++++++++.    ++
T Consensus        10 gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i~~~~~   89 (259)
T d2fr1a1          10 GTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDDVP   89 (259)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTTSC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhcccccccc
Confidence            7999999999999999999999999 588888876555555555555544466899999999999999998876    57


Q ss_pred             CCEEEEcccccccCCCCCCchhhH----hhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCCChHH
Q 025786          146 FDAVMHFAAVAYVGESTLDPLKYY----HNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYG  221 (248)
Q Consensus       146 iD~li~~Ag~~~~~~~~~~~~~~~----~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~  221 (248)
                      +|.||||||........+...+.+    ..++.+..++.+.+...+.++||++||.+..           .+.+.+..|+
T Consensus        90 i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~iv~~SS~a~~-----------~g~~~~~~Ya  158 (259)
T d2fr1a1          90 LSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASA-----------FGAPGLGGYA  158 (259)
T ss_dssp             EEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHH-----------TCCTTCTTTH
T ss_pred             ccccccccccccccccccccHHHHHHHhhhhccchhHHHHHhhccCCceEeeecchhhc-----------cCCcccHHHH
Confidence            999999999876655444444444    4555566777777777777899999998775           2334477899


Q ss_pred             HHHHHHHHHHHHHhhcCCCcEEEEec
Q 025786          222 KAKKMAEDIILDFSKNSDMAVLQCHR  247 (248)
Q Consensus       222 ~sK~a~e~l~~~~~~~~gi~~~~v~P  247 (248)
                      ++|++.+.|+++++.+ |+++++|+|
T Consensus       159 Aaka~l~~la~~~~~~-Gi~v~~I~p  183 (259)
T d2fr1a1         159 PGNAYLDGLAQQRRSD-GLPATAVAW  183 (259)
T ss_dssp             HHHHHHHHHHHHHHHT-TCCCEEEEE
T ss_pred             HHHHhHHHHHHHHHhC-CCCEEECCC
Confidence            9999999999998764 999999987

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.92  E-value=3e-25  Score=181.68  Aligned_cols=164  Identities=16%  Similarity=0.109  Sum_probs=117.8

Q ss_pred             CCceEEEEecCCc--hhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc--
Q 025786           68 EGVTHVLVTGGAG--YIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE--  143 (248)
Q Consensus        68 ~~~k~vlITGasg--~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--  143 (248)
                      ++ |++|||||+|  |||++++++|+++|++|++++|+.+..+...+    .....+...++++|++|++++++++++  
T Consensus         7 ~g-K~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~----~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   81 (256)
T d1ulua_           7 SG-KKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEK----LAEALGGALLFRADVTQDEELDALFAGVK   81 (256)
T ss_dssp             TT-CEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH----HHHHTTCCEEEECCTTCHHHHHHHHHHHH
T ss_pred             CC-CEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHH----hhhccCcccccccccCCHHHHHHHHHHHH
Confidence            45 9999999987  99999999999999999998875332222222    212234677899999999999988875  


Q ss_pred             ---CCCCEEEEcccccccC----CCCCCchhhHhh----hHHHHHHHHHHHHH--cCCCEEEEeccceecCCCCCCCCCC
Q 025786          144 ---NAFDAVMHFAAVAYVG----ESTLDPLKYYHN----ITSNTLVVLESMAR--HGVDTLIYSSTCATYGEPEKMPITE  210 (248)
Q Consensus       144 ---~~iD~li~~Ag~~~~~----~~~~~~~~~~~~----~~~~~~~ll~~~~~--~~~~~iV~~SS~~~~g~~~~~~~~e  210 (248)
                         +++|+||||||.....    ...+...+.|..    |..+...+...+..  .+.++||++||....          
T Consensus        82 ~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~Iv~isS~~~~----------  151 (256)
T d1ulua_          82 EAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASE----------  151 (256)
T ss_dssp             HHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGT----------
T ss_pred             HhcCCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccCCEEEEEeehHhc----------
Confidence               7899999999975321    222333333433    33333333333221  123689999997765          


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          211 ETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       211 ~~~~~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                       .+.+...+|+.||++.+.+++.++.|   +||++++|.|
T Consensus       152 -~~~~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~I~P  190 (256)
T d1ulua_         152 -KVVPKYNVMAIAKAALEASVRYLAYELGPKGVRVNAISA  190 (256)
T ss_dssp             -SBCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEE
T ss_pred             -CCCCCchHHHHHHHHHHHHHHHHHHHhcccCCEEeeecc
Confidence             23445778999999999999999988   5899999998

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=99.92  E-value=8.8e-25  Score=188.45  Aligned_cols=178  Identities=35%  Similarity=0.516  Sum_probs=142.0

Q ss_pred             eEEEEecCCchhHHHHHHHHHH-CCCEEEEEecCCCCcch------hhh---hhhhhc-----CCCCceEEEEccCCCHH
Q 025786           71 THVLVTGGAGYIGSHAALRLLK-DSYRVTIVDNLSRGNIG------AVK---VLQELF-----PEPGRLQFIYADLGDAK  135 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~-~G~~V~~~~r~~~~~~~------~~~---~~~~~~-----~~~~~~~~~~~Dl~~~~  135 (248)
                      |+||||||+||||++++++|++ .|++|+++|+..+....      ...   .++...     .....+.++.+|++|.+
T Consensus         3 MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~   82 (383)
T d1gy8a_           3 MRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNED   82 (383)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCHH
Confidence            5899999999999999999986 68999999853322111      111   111110     11346788999999999


Q ss_pred             HHHHHhhc-CCCCEEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCC-------CCC
Q 025786          136 AVNKFFSE-NAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPE-------KMP  207 (248)
Q Consensus       136 ~~~~~~~~-~~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~-------~~~  207 (248)
                      .+++++++ .++|+|||+|+..........+...+..|..++.+++.++++.+.++++++||...|+...       ..+
T Consensus        83 ~l~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~N~~~t~~~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~  162 (383)
T d1gy8a_          83 FLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNAEP  162 (383)
T ss_dssp             HHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSCCC-----CCCC
T ss_pred             HhhhhhhccceeehhhcccccccccccccccccccccccccccccchhhhccCCcccccccccccccccccccccccccc
Confidence            99999976 4689999999976554445566778889999999999999999999999999988886432       235


Q ss_pred             CCCCCCCCCCChHHHHHHHHHHHHHHHhhcCCCcEEEEecC
Q 025786          208 ITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       208 ~~e~~~~~~~~~Y~~sK~a~e~l~~~~~~~~gi~~~~v~Pf  248 (248)
                      +.|+.+..|.++|+.||.++|.+++.+.+.+|++++++||+
T Consensus       163 ~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~gl~~~~lR~~  203 (383)
T d1gy8a_         163 IDINAKKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYF  203 (383)
T ss_dssp             BCTTSCCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEEC
T ss_pred             cccccCCCCCCHHHhhHhHHHHHHHHHHHHhCCCEEEEecc
Confidence            67778888999999999999999999999999999999986

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=99.92  E-value=5e-25  Score=187.02  Aligned_cols=168  Identities=21%  Similarity=0.328  Sum_probs=132.8

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCC-CEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDS-YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~l  149 (248)
                      |+||||||||+||++++++|+++| ++|+++++.......       . ....+++++++|+++.+++.+.+.+ ++|+|
T Consensus         1 MKILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~-------~-~~~~~~~~i~~Di~~~~~~~~~~~~-~~d~V   71 (342)
T d2blla1           1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISR-------F-LNHPHFHFVEGDISIHSEWIEYHVK-KCDVV   71 (342)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGG-------G-TTCTTEEEEECCTTTCSHHHHHHHH-HCSEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhh-------h-ccCCCeEEEECccCChHHHHHHHHh-CCCcc
Confidence            469999999999999999999999 589998864322111       1 1235799999999988777664443 68999


Q ss_pred             EEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCC-------CCCCCCChHHH
Q 025786          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEE-------TPQAPINPYGK  222 (248)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~-------~~~~~~~~Y~~  222 (248)
                      ||+|+.........++...+..|+.++.++++.+.+.+. +++++||..+|+........|.       ....|...|+.
T Consensus        72 ih~a~~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~-~~~~~ss~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~  150 (342)
T d2blla1          72 LPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRK-RIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSV  150 (342)
T ss_dssp             EECBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTC-EEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGHHHH
T ss_pred             ccccccccccccccCCccccccccccccccccccccccc-cccccccccccccccccccccccccccccccCCCcchhhh
Confidence            999998655445556778899999999999999988875 6778899999986655443332       23346678999


Q ss_pred             HHHHHHHHHHHHhhcCCCcEEEEecC
Q 025786          223 AKKMAEDIILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       223 sK~a~e~l~~~~~~~~gi~~~~v~Pf  248 (248)
                      ||.++|++++.+++++|++++++||+
T Consensus       151 sK~~~E~~~~~~~~~~~~~~~i~r~~  176 (342)
T d2blla1         151 SKQLLDRVIWAYGEKEGLQFTLFRPF  176 (342)
T ss_dssp             HHHHHHHHHHHHHHHHCCCEEEEEEC
T ss_pred             cccchhhhhhhhhcccCceeEEeecc
Confidence            99999999999999999999999985

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.92  E-value=2e-24  Score=176.07  Aligned_cols=167  Identities=17%  Similarity=0.184  Sum_probs=118.7

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC--EEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-----
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----  143 (248)
                      |+||||||++|||+++|++|+++|+  +|++++|+..+.   .+ +++.  .+.++.++++|++|.+++++++++     
T Consensus         4 KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~---~~-l~~~--~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~   77 (250)
T d1yo6a1           4 GSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKA---TE-LKSI--KDSRVHVLPLTVTCDKSLDTFVSKVGEIV   77 (250)
T ss_dssp             SEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGC---HH-HHTC--CCTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHH---HH-HHHh--hCCceEEEEEecCCHHHHHHHHHHHHHHh
Confidence            8999999999999999999999996  677777654332   22 2222  245799999999999999888765     


Q ss_pred             --CCCCEEEEccccccc-CCCCCCchh----hHhhhHHH----HHHHHHHHHHcC-----------CCEEEEeccceecC
Q 025786          144 --NAFDAVMHFAAVAYV-GESTLDPLK----YYHNITSN----TLVVLESMARHG-----------VDTLIYSSTCATYG  201 (248)
Q Consensus       144 --~~iD~li~~Ag~~~~-~~~~~~~~~----~~~~~~~~----~~~ll~~~~~~~-----------~~~iV~~SS~~~~g  201 (248)
                        .++|+||||||+... ....+...+    .++.|+.+    ++.++|.|++.+           .++++++||...+-
T Consensus        78 ~~~~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~~  157 (250)
T d1yo6a1          78 GSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSI  157 (250)
T ss_dssp             GGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCS
T ss_pred             CCCCeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceeccccccccccccc
Confidence              259999999998643 333333333    34455555    445778886542           25788888755442


Q ss_pred             CCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          202 EPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       202 ~~~~~~~~e~~~~~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      ...    ....+..+..+|+.||++...+++.++.+   .||++++++|
T Consensus       158 ~~~----~~~~~~~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~P  202 (250)
T d1yo6a1         158 TDN----TSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCP  202 (250)
T ss_dssp             TTC----CSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEEC
T ss_pred             cCC----cccccchhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEec
Confidence            111    01123344567999999999999999987   5799999999

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=99.91  E-value=7.7e-24  Score=178.54  Aligned_cols=174  Identities=25%  Similarity=0.380  Sum_probs=134.5

Q ss_pred             EEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEEE
Q 025786           72 HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVMH  151 (248)
Q Consensus        72 ~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li~  151 (248)
                      +|||||||||||++++++|+++|++|+++++..+...  ...+..+. ...+++++.+|++|.+++.++++..++|+|||
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~--~~~~~~~~-~~~~~~~i~~Di~~~~~l~~~~~~~~~d~Vih   78 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGA--TDNLHWLS-SLGNFEFVHGDIRNKNDVTRLITKYMPDSCFH   78 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTH--HHHHHHHH-TTCCCEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccc--hhHHHHhh-ccCCcEEEEcccCCHHHHHHHHHhcCCceEEe
Confidence            6999999999999999999999999999986433322  12222221 23578999999999999999998777899999


Q ss_pred             cccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccce-ecCCCCCC----------------CCCCCCCC
Q 025786          152 FAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCA-TYGEPEKM----------------PITEETPQ  214 (248)
Q Consensus       152 ~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~-~~g~~~~~----------------~~~e~~~~  214 (248)
                      +|+.........++...++.|+.+|.++++++.+.+..++|+.||.. .++.....                ...+..+.
T Consensus        79 ~aa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~i~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (338)
T d1orra_          79 LAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQL  158 (338)
T ss_dssp             CCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTSCC
T ss_pred             ecccccccccccChHHHHHHHHHHHHHHHHhhhcccccccccccccccccccccccccccccccccccccccCcccCCcc
Confidence            99976544444567788899999999999999998877666655544 44433221                12344456


Q ss_pred             CCCChHHHHHHHHHHHHHHHhhcCCCcEEEEecC
Q 025786          215 APINPYGKAKKMAEDIILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       215 ~~~~~Y~~sK~a~e~l~~~~~~~~gi~~~~v~Pf  248 (248)
                      .|.+.|+.+|...|.+...+...++....+++|+
T Consensus       159 ~~~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~  192 (338)
T d1orra_         159 DFHSPYGCSKGAADQYMLDYARIFGLNTVVFRHS  192 (338)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEC
T ss_pred             ccccccccccchhhhhhhhhhhccCccccccccc
Confidence            6788999999999999999999999888888764

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=99.90  E-value=2.6e-23  Score=176.97  Aligned_cols=174  Identities=20%  Similarity=0.201  Sum_probs=138.7

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li  150 (248)
                      |+||||||||+||++++++|+++|++|++++|...+.....+..    .....++++.+|++|++.+.++++...+|+++
T Consensus         9 KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~----~~~~~i~~~~~Dl~d~~~l~~~~~~~~~~~v~   84 (356)
T d1rkxa_           9 KRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETA----RVADGMQSEIGDIRDQNKLLESIREFQPEIVF   84 (356)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHT----TTTTTSEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhh----hcccCCeEEEeeccChHhhhhhhhhchhhhhh
Confidence            99999999999999999999999999999998665544332221    12346899999999999999999887899999


Q ss_pred             EcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCC-CEEEEeccceecCC-CCCCCCCCCCCCCCCChHHHHHHHHH
Q 025786          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV-DTLIYSSTCATYGE-PEKMPITEETPQAPINPYGKAKKMAE  228 (248)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~-~~iV~~SS~~~~g~-~~~~~~~e~~~~~~~~~Y~~sK~a~e  228 (248)
                      |+|+..........+...+..|+.++.+++.++.+.+. ..++++||...+.. ....+..|+.+..|.++|+.+|.+.|
T Consensus        85 ~~aa~~~~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~y~~~k~~~e  164 (356)
T d1rkxa_          85 HMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENEAMGGYDPYSNSKGCAE  164 (356)
T ss_dssp             ECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTTSCBCCSSHHHHHHHHHH
T ss_pred             hhhccccccccccCCccccccccccchhhhhhhhccccccccccccccccccccccccccccccccCCCCccccccccch
Confidence            99997654444556778888999999999999988654 45666665555543 34456777888889999999999999


Q ss_pred             HHHHHHhhc---------CCCcEEEEecC
Q 025786          229 DIILDFSKN---------SDMAVLQCHRF  248 (248)
Q Consensus       229 ~l~~~~~~~---------~gi~~~~v~Pf  248 (248)
                      ..+..++.+         +++.++++||+
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~  193 (356)
T d1rkxa_         165 LVTSSYRNSFFNPANYGQHGTAVATVRAG  193 (356)
T ss_dssp             HHHHHHHHHHSCGGGHHHHCCEEEEEECC
T ss_pred             hhhhHHhhhcccchhccccCceEEeccCC
Confidence            999887764         46788888875

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.90  E-value=1.5e-23  Score=169.47  Aligned_cols=151  Identities=15%  Similarity=0.163  Sum_probs=108.3

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-------
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-------  143 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-------  143 (248)
                      |+||||||++|||++++++|+++|++|+++++.....             ......+.+|..+.++.+.+...       
T Consensus         3 K~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   69 (236)
T d1dhra_           3 RRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEE-------------ASASVIVKMTDSFTEQADQVTAEVGKLLGD   69 (236)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTT-------------SSEEEECCCCSCHHHHHHHHHHHHHHHHTT
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccc-------------ccccceeecccCcHHHHHHHHHHHHHHhCC
Confidence            9999999999999999999999999999998643221             12334456677666655444332       


Q ss_pred             CCCCEEEEccccccc-CCCCCCchhhH----hhhHHHHHH----HHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCC
Q 025786          144 NAFDAVMHFAAVAYV-GESTLDPLKYY----HNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQ  214 (248)
Q Consensus       144 ~~iD~li~~Ag~~~~-~~~~~~~~~~~----~~~~~~~~~----ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~  214 (248)
                      +++|+||||||.... ....+.+.+.|    +.|+.++..    +++.|+  +.++||++||.+.+           .+.
T Consensus        70 ~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~--~~G~Iv~isS~~~~-----------~~~  136 (236)
T d1dhra_          70 QKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLK--EGGLLTLAGAKAAL-----------DGT  136 (236)
T ss_dssp             CCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEE--EEEEEEEECCGGGG-----------SCC
T ss_pred             CCceEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcc--cccceeEEccHHHc-----------CCc
Confidence            479999999996433 23333444444    344444433    444443  24799999998776           234


Q ss_pred             CCCChHHHHHHHHHHHHHHHhhcC-----CCcEEEEec
Q 025786          215 APINPYGKAKKMAEDIILDFSKNS-----DMAVLQCHR  247 (248)
Q Consensus       215 ~~~~~Y~~sK~a~e~l~~~~~~~~-----gi~~~~v~P  247 (248)
                      +...+|++||++.+.|++.++.|+     ||++++|.|
T Consensus       137 ~~~~~Y~asKaal~~lt~~la~El~~~~~gI~vn~v~P  174 (236)
T d1dhra_         137 PGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLP  174 (236)
T ss_dssp             TTBHHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEE
T ss_pred             cCCcccHHHHHHHHHHHHHHHHHhccCCCcEEEEEEEe
Confidence            446799999999999999999874     699999998

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=99.90  E-value=2.5e-23  Score=176.75  Aligned_cols=172  Identities=20%  Similarity=0.193  Sum_probs=127.5

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~l  149 (248)
                      +|+||||||+|+||++++++|+++|++|+++.|+..+.....+..... ........+.+|+.|.+++.+++.  ++|++
T Consensus        11 gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~--~~~~v   87 (342)
T d1y1pa1          11 GSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAK-YPGRFETAVVEDMLKQGAYDEVIK--GAAGV   87 (342)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH-STTTEEEEECSCTTSTTTTTTTTT--TCSEE
T ss_pred             cCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhcc-ccccccEEEeccccchhhhhhhcc--cchhh
Confidence            399999999999999999999999999999887543322222221111 222344567799999999888886  68999


Q ss_pred             EEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHc-CCCEEEEeccceecCCCC--C--CC----------------C
Q 025786          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARH-GVDTLIYSSTCATYGEPE--K--MP----------------I  208 (248)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~-~~~~iV~~SS~~~~g~~~--~--~~----------------~  208 (248)
                      +|+|+...   ........+..|+.+|.++++.+.+. +.+++|++||+.+++...  .  ..                .
T Consensus        88 ~~~a~~~~---~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~~~i~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~  164 (342)
T d1y1pa1          88 AHIASVVS---FSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTL  164 (342)
T ss_dssp             EECCCCCS---CCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHHS
T ss_pred             hhhccccc---ccccccccccchhhhHHHHHHhhhcccccccccccccceeeccCCCCCCCccccccccccccccccccc
Confidence            99998653   23455667788999999999999886 578999999976543211  1  11                2


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHhhcC--CCcEEEEec
Q 025786          209 TEETPQAPINPYGKAKKMAEDIILDFSKNS--DMAVLQCHR  247 (248)
Q Consensus       209 ~e~~~~~~~~~Y~~sK~a~e~l~~~~~~~~--gi~~~~v~P  247 (248)
                      .|..+..|.++|+.||.++|++++.+++++  ++++++++|
T Consensus       165 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~i~p  205 (342)
T d1y1pa1         165 PESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLP  205 (342)
T ss_dssp             CTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEE
T ss_pred             cccCCCCCcCcccchhHhHHHHHHHhhhhcccccccceecc
Confidence            344455567789999999999999998875  467777776

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.90  E-value=3.2e-23  Score=167.33  Aligned_cols=151  Identities=19%  Similarity=0.206  Sum_probs=106.1

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhh-------c
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFS-------E  143 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~  143 (248)
                      .+||||||++|||++++++|+++|++|++++|+....             ......+.+|+.+.+......+       .
T Consensus         3 gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   69 (235)
T d1ooea_           3 GKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQ-------------ADSNILVDGNKNWTEQEQSILEQTASSLQG   69 (235)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTT-------------SSEEEECCTTSCHHHHHHHHHHHHHHHHTT
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhc-------------ccccceeccccCchhHHHHHHHHHHHHhcC
Confidence            5689999999999999999999999999999754321             1123345567665554433322       2


Q ss_pred             CCCCEEEEccccccc-CCCCCCchhhHh----hhHHHHHH----HHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCC
Q 025786          144 NAFDAVMHFAAVAYV-GESTLDPLKYYH----NITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQ  214 (248)
Q Consensus       144 ~~iD~li~~Ag~~~~-~~~~~~~~~~~~----~~~~~~~~----ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~  214 (248)
                      +++|+||||||.... ....++..+.|+    .|+.++..    +++.|++  .++||++||...+.           +.
T Consensus        70 g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~--~g~Iv~isS~~~~~-----------~~  136 (235)
T d1ooea_          70 SQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKP--GGLLQLTGAAAAMG-----------PT  136 (235)
T ss_dssp             CCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGS-----------CC
T ss_pred             CCeeEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhccccccc--ceEEEEeccHHhcC-----------Cc
Confidence            789999999997543 233344444444    34444333    4444432  36999999987652           44


Q ss_pred             CCCChHHHHHHHHHHHHHHHhhcC-----CCcEEEEec
Q 025786          215 APINPYGKAKKMAEDIILDFSKNS-----DMAVLQCHR  247 (248)
Q Consensus       215 ~~~~~Y~~sK~a~e~l~~~~~~~~-----gi~~~~v~P  247 (248)
                      +...+|++||++.+.|+++++.|+     +++++.++|
T Consensus       137 ~~~~~Y~asKaal~~l~~~la~e~~~~~~~i~v~~i~P  174 (235)
T d1ooea_         137 PSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMP  174 (235)
T ss_dssp             TTBHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEE
T ss_pred             ccccchHHHHHHHHHHHHHHHHHhccCCCceEEEEEec
Confidence            457899999999999999999874     678888888

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=1.3e-22  Score=164.98  Aligned_cols=163  Identities=19%  Similarity=0.254  Sum_probs=120.4

Q ss_pred             CCCceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc---
Q 025786           67 EEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE---  143 (248)
Q Consensus        67 ~~~~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~---  143 (248)
                      .+| |++|||||++|||+++|++|+++|++|++++|+...   +.+..+++   ........+|+.+.+++++....   
T Consensus         3 lkG-KvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~---~~~~~~~l---~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (248)
T d2o23a1           3 VKG-LVAVITGGASGLGLATAERLVGQGASAVLLDLPNSG---GEAQAKKL---GNNCVFAPADVTSEKDVQTALALAKG   75 (248)
T ss_dssp             CTT-CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSS---HHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCC-CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHH---HHHHHHHh---CCCccccccccccccccccccccccc
Confidence            355 999999999999999999999999999999975443   34444444   34678889999998887766654   


Q ss_pred             --CCCCEEEEcccccccCC------CCCCchhhH----hhhHHHH----HHHHHHHHHc------CCCEEEEeccceecC
Q 025786          144 --NAFDAVMHFAAVAYVGE------STLDPLKYY----HNITSNT----LVVLESMARH------GVDTLIYSSTCATYG  201 (248)
Q Consensus       144 --~~iD~li~~Ag~~~~~~------~~~~~~~~~----~~~~~~~----~~ll~~~~~~------~~~~iV~~SS~~~~g  201 (248)
                        ...|.+++|+++.....      ..+.+.+.|    +.|..++    +.+++.|...      +.++||++||.+.+ 
T Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~-  154 (248)
T d2o23a1          76 KFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAF-  154 (248)
T ss_dssp             HHSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHH-
T ss_pred             ccccccccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhc-
Confidence              67899999988643321      222233334    3444443    3355555432      34689999998776 


Q ss_pred             CCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          202 EPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       202 ~~~~~~~~e~~~~~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                                .+.++..+|+.||++.+.|++.++.|   +||++++|.|
T Consensus       155 ----------~~~~~~~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~P  193 (248)
T d2o23a1         155 ----------EGQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAP  193 (248)
T ss_dssp             ----------HCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE
T ss_pred             ----------cCCCCchHHHHHHHHHHHHHHHHHHHhcccCcceeeecc
Confidence                      23445779999999999999999988   5899999998

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=99.89  E-value=5e-23  Score=170.42  Aligned_cols=167  Identities=17%  Similarity=0.083  Sum_probs=109.1

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCC-cchhhhhhhhhcCC---------------CCceEEEEccCCC
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRG-NIGAVKVLQELFPE---------------PGRLQFIYADLGD  133 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~---------------~~~~~~~~~Dl~~  133 (248)
                      +.++|||||++|||+++|++|+++|++|++++++... .+++.+.+......               +..+....+|+++
T Consensus         2 ~pVAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~   81 (284)
T d1e7wa_           2 VPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTL   81 (284)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCCC
Confidence            4789999999999999999999999999998864322 12222233222110               1123345567999


Q ss_pred             HHHHHHHhhc-----CCCCEEEEcccccccCCCCCCchhhH------------------hhhHHHHHHHHHHH-------
Q 025786          134 AKAVNKFFSE-----NAFDAVMHFAAVAYVGESTLDPLKYY------------------HNITSNTLVVLESM-------  183 (248)
Q Consensus       134 ~~~~~~~~~~-----~~iD~li~~Ag~~~~~~~~~~~~~~~------------------~~~~~~~~~ll~~~-------  183 (248)
                      .+++++++++     +++|+||||||.....+..+.+++.|                  ..|..+...+...+       
T Consensus        82 ~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~  161 (284)
T d1e7wa_          82 FTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGT  161 (284)
T ss_dssp             HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHHHhCCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhhh
Confidence            9999988865     79999999999876554433332222                  22222222222221       


Q ss_pred             ---HHcCCCEEEEeccceecCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          184 ---ARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       184 ---~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                         .+.+.++||+++|....           .+.+...+|+.||++.+.|++.++.+   +||++++|.|
T Consensus       162 ~~~~~~~~~~ii~~~s~~~~-----------~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~P  220 (284)
T d1e7wa_         162 PAKHRGTNYSIINMVDAMTN-----------QPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGP  220 (284)
T ss_dssp             CGGGSCSCEEEEEECCTTTT-----------SCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE
T ss_pred             HHHhcCCCCccccccccccc-----------CCccceeeeccccccchhhhHHHHHHhCCcccccccccc
Confidence               11234578888875543           24455779999999999999999987   5899999998

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=2.8e-22  Score=158.40  Aligned_cols=149  Identities=16%  Similarity=0.210  Sum_probs=117.2

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~l  149 (248)
                      ||+|+||||||+||++++++|+++|++|+++.|++.+...         .....++++.+|++|.+++.++++  ++|+|
T Consensus         3 ~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~---------~~~~~~~~~~gD~~d~~~l~~al~--~~d~v   71 (205)
T d1hdoa_           3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPS---------EGPRPAHVVVGDVLQAADVDKTVA--GQDAV   71 (205)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCS---------SSCCCSEEEESCTTSHHHHHHHHT--TCSEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhccc---------ccccccccccccccchhhHHHHhc--CCCEE
Confidence            6899999999999999999999999999999976543211         113468899999999999999998  68999


Q ss_pred             EEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCCChHHHHHHHHHH
Q 025786          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAED  229 (248)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e~  229 (248)
                      ||++|.....       .....+..++.++++++++++.+++|++||...++....       .......|...|..+|+
T Consensus        72 i~~~g~~~~~-------~~~~~~~~~~~~l~~aa~~~~v~r~i~~ss~~~~~~~~~-------~~~~~~~~~~~~~~~e~  137 (205)
T d1hdoa_          72 IVLLGTRNDL-------SPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTK-------VPPRLQAVTDDHIRMHK  137 (205)
T ss_dssp             EECCCCTTCC-------SCCCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCTTC-------SCGGGHHHHHHHHHHHH
T ss_pred             EEEeccCCch-------hhhhhhHHHHHHHHHHHHhcCCCeEEEEeeeeccCCCcc-------ccccccccchHHHHHHH
Confidence            9999864221       112345567889999999999999999999888754332       12234578889999888


Q ss_pred             HHHHHhhcCCCcEEEEec
Q 025786          230 IILDFSKNSDMAVLQCHR  247 (248)
Q Consensus       230 l~~~~~~~~gi~~~~v~P  247 (248)
                      +++    +.+++++++||
T Consensus       138 ~l~----~~~~~~tiirp  151 (205)
T d1hdoa_         138 VLR----ESGLKYVAVMP  151 (205)
T ss_dssp             HHH----HTCSEEEEECC
T ss_pred             HHH----hcCCceEEEec
Confidence            765    47999999998

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=99.87  E-value=9.1e-22  Score=160.71  Aligned_cols=164  Identities=15%  Similarity=0.135  Sum_probs=114.6

Q ss_pred             CCceEEEEecCCc--hhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc--
Q 025786           68 EGVTHVLVTGGAG--YIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE--  143 (248)
Q Consensus        68 ~~~k~vlITGasg--~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--  143 (248)
                      .+ |++|||||+|  |||+++|+.|+++|++|++++|+....+...    ++....+....+..|+++..++.+.+++  
T Consensus         4 ~g-K~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (258)
T d1qsga_           4 SG-KRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVE----EFAAQLGSDIVLQCDVAEDASIDTMFAELG   78 (258)
T ss_dssp             TT-CEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHH----HHHHHTTCCCEEECCTTCHHHHHHHHHHHH
T ss_pred             CC-CEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH----HHHhhcCCcceeecccchHHHHHHHHHHhh
Confidence            45 9999999998  8999999999999999999997643222222    2222234667789999999988877765  


Q ss_pred             ---CCCCEEEEcccccccCCCC-----CCchhhHhhhHHHH----HHHHHHHHH--cCCCEEEEeccceecCCCCCCCCC
Q 025786          144 ---NAFDAVMHFAAVAYVGEST-----LDPLKYYHNITSNT----LVVLESMAR--HGVDTLIYSSTCATYGEPEKMPIT  209 (248)
Q Consensus       144 ---~~iD~li~~Ag~~~~~~~~-----~~~~~~~~~~~~~~----~~ll~~~~~--~~~~~iV~~SS~~~~g~~~~~~~~  209 (248)
                         +++|++||||+........     ....+.+..+...+    ..+...+..  .+.+.||++||....         
T Consensus        79 ~~~~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~iss~~~~---------  149 (258)
T d1qsga_          79 KVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAE---------  149 (258)
T ss_dssp             TTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGT---------
T ss_pred             hcccccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCCcEEEEecchhhc---------
Confidence               6899999999875433221     12222333333322    222222222  234578888886653         


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          210 EETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       210 e~~~~~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                        .+.+....|+.||++.+.+++.++.+   +||++++|.|
T Consensus       150 --~~~~~~~~Y~~sKaal~~ltr~lA~el~~~gIrVN~I~P  188 (258)
T d1qsga_         150 --RAIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISA  188 (258)
T ss_dssp             --SBCTTTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEE
T ss_pred             --cCCCCcHHHHHHHHHHHHHHHHHHHHhCccCceeecccc
Confidence              23445678999999999999999988   5799999998

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=99.86  E-value=2.5e-21  Score=159.45  Aligned_cols=166  Identities=13%  Similarity=0.061  Sum_probs=112.1

Q ss_pred             CCCceEEEEecCCc--hhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-
Q 025786           67 EEGVTHVLVTGGAG--YIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-  143 (248)
Q Consensus        67 ~~~~k~vlITGasg--~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-  143 (248)
                      +++ |++|||||+|  |||+++|++|+++|++|++++|+...    .+..+++........+..+|+++.+++++++++ 
T Consensus         3 L~g-K~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~~----~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~   77 (274)
T d2pd4a1           3 LKG-KKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESL----EKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSV   77 (274)
T ss_dssp             TTT-CEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTT----HHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHH
T ss_pred             CCC-CEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH----HHHHHHHHhhCCceeEeeecccchhhHHHHHHHH
Confidence            345 9999999876  89999999999999999999976322    222222222244667889999999998888865 


Q ss_pred             ----CCCCEEEEcccccccCCCCC----CchhhHhhhHHH----HHHHHHHHHH-cCCC-EEEEeccceecCCCCCCCCC
Q 025786          144 ----NAFDAVMHFAAVAYVGESTL----DPLKYYHNITSN----TLVVLESMAR-HGVD-TLIYSSTCATYGEPEKMPIT  209 (248)
Q Consensus       144 ----~~iD~li~~Ag~~~~~~~~~----~~~~~~~~~~~~----~~~ll~~~~~-~~~~-~iV~~SS~~~~g~~~~~~~~  209 (248)
                          +++|++|||+|.........    .....+..+...    .......+.+ .+.+ .|+++||.+...        
T Consensus        78 ~~~~g~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~--------  149 (274)
T d2pd4a1          78 KKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTK--------  149 (274)
T ss_dssp             HHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTS--------
T ss_pred             HHHcCCCCeEEeecccccccccccccccccchhhhhhhccccccccccccccccccccCcceeeeccccccc--------
Confidence                78999999999764322211    111222222222    1122222222 2223 455566655542        


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEecC
Q 025786          210 EETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVLQCHRF  248 (248)
Q Consensus       210 e~~~~~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~Pf  248 (248)
                         +......|+.||++.+.+++.++.+   +||++++|.|.
T Consensus       150 ---~~~~~~~y~asK~al~~ltr~lA~e~~~~GIrvN~I~PG  188 (274)
T d2pd4a1         150 ---YMAHYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAG  188 (274)
T ss_dssp             ---BCTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEEC
T ss_pred             ---ccccchhhhHHHHHHHHHHHhhHHHhcCcCceecccccC
Confidence               3344678999999999999999988   68999999984

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=99.85  E-value=1.7e-21  Score=160.99  Aligned_cols=144  Identities=19%  Similarity=0.239  Sum_probs=119.7

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li  150 (248)
                      |+||||||||+||++++++|.++|+.| .+++....                    +.+|++|.+.+++++++.++|+||
T Consensus         1 MKILItG~tGfiG~~l~~~L~~~g~~v-~~~~~~~~--------------------~~~Dl~~~~~~~~~i~~~~~D~Vi   59 (298)
T d1n2sa_           1 MNILLFGKTGQVGWELQRSLAPVGNLI-ALDVHSKE--------------------FCGDFSNPKGVAETVRKLRPDVIV   59 (298)
T ss_dssp             CEEEEECTTSHHHHHHHHHTTTTSEEE-EECTTCSS--------------------SCCCTTCHHHHHHHHHHHCCSEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEE-EEECCCcc--------------------ccCcCCCHHHHHHHHHHcCCCEEE
Confidence            469999999999999999999998644 44432110                    347999999999999877899999


Q ss_pred             EcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCCChHHHHHHHHHHH
Q 025786          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDI  230 (248)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e~l  230 (248)
                      |+||..........+...+..|..++.+++.++.+.+ .+++++||..+|+.....+.+|+.+..|.+.|+.+|.++|.+
T Consensus        60 h~Aa~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~~ss~~~~~~~~~~~~~E~~~~~p~~~y~~~k~~~e~~  138 (298)
T d1n2sa_          60 NAAAHTAVDKAESEPELAQLLNATSVEAIAKAANETG-AWVVHYSTDYVFPGTGDIPWQETDATSPLNVYGKTKLAGEKA  138 (298)
T ss_dssp             ECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTT-CEEEEEEEGGGSCCCTTCCBCTTSCCCCSSHHHHHHHHHHHH
T ss_pred             EecccccccccccCccccccccccccccchhhhhccc-cccccccccccccCCCCCCCccccccCCCchHhhhhhhhhhh
Confidence            9999776555566777888889999999999997776 578889998888888888899999999999999999999998


Q ss_pred             HHHHhh
Q 025786          231 ILDFSK  236 (248)
Q Consensus       231 ~~~~~~  236 (248)
                      ++....
T Consensus       139 ~~~~~~  144 (298)
T d1n2sa_         139 LQDNCP  144 (298)
T ss_dssp             HHHHCS
T ss_pred             HHhhhc
Confidence            876544

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=99.85  E-value=8.7e-21  Score=153.03  Aligned_cols=151  Identities=21%  Similarity=0.249  Sum_probs=109.1

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc----CCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----NAF  146 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~----~~i  146 (248)
                      |++|||||++|||+++|++|+++|++|++++|+..               ..+...+++|+++......+..+    ...
T Consensus         2 K~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~---------------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~   66 (241)
T d1uaya_           2 RSALVTGGASGLGRAAALALKARGYRVVVLDLRRE---------------GEDLIYVEGDVTREEDVRRAVARAQEEAPL   66 (241)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC---------------SSSSEEEECCTTCHHHHHHHHHHHHHHSCE
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcc---------------cccceEeeccccchhhhHHHHHhhhccccc
Confidence            89999999999999999999999999999997432               12456788999998877766654    456


Q ss_pred             CEEEEcccccccC----CCCCCchhh----HhhhHHHHH----HHHHHH------HHcCCCEEEEeccceecCCCCCCCC
Q 025786          147 DAVMHFAAVAYVG----ESTLDPLKY----YHNITSNTL----VVLESM------ARHGVDTLIYSSTCATYGEPEKMPI  208 (248)
Q Consensus       147 D~li~~Ag~~~~~----~~~~~~~~~----~~~~~~~~~----~ll~~~------~~~~~~~iV~~SS~~~~g~~~~~~~  208 (248)
                      |.++++++.....    .......+.    ++.|.....    .+++.+      .+.+.++||++||...+        
T Consensus        67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~--------  138 (241)
T d1uaya_          67 FAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAF--------  138 (241)
T ss_dssp             EEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHH--------
T ss_pred             cchhhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhc--------
Confidence            7777777753321    112222222    333433332    334442      23345799999998775        


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          209 TEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       209 ~e~~~~~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                         .+.+...+|+.||++.+.|++.++.|   +||++++|.|
T Consensus       139 ---~~~~~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~V~P  177 (241)
T d1uaya_         139 ---EGQIGQAAYAASKGGVVALTLPAARELAGWGIRVVTVAP  177 (241)
T ss_dssp             ---HCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE
T ss_pred             ---cCCCCchhhHHHHHHHHHHHHHHHHHHhhcCCceeeecC
Confidence               23445779999999999999999987   6899999998

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=99.84  E-value=1.3e-20  Score=154.81  Aligned_cols=149  Identities=23%  Similarity=0.248  Sum_probs=122.5

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li  150 (248)
                      |+||||||||+||++++++|.++|++|+.++|.                        .+|++|.++++++++..++|+||
T Consensus         2 MKIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~------------------------~~D~~d~~~~~~~l~~~~~d~vi   57 (281)
T d1vl0a_           2 MKILITGANGQLGREIQKQLKGKNVEVIPTDVQ------------------------DLDITNVLAVNKFFNEKKPNVVI   57 (281)
T ss_dssp             EEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT------------------------TCCTTCHHHHHHHHHHHCCSEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEeech------------------------hccCCCHHHHHHHHHHcCCCEEE
Confidence            569999999999999999999999999998752                        15899999999999877899999


Q ss_pred             EcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCCChHHHHHHHHHHH
Q 025786          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDI  230 (248)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e~l  230 (248)
                      |+|+..........+......+...+..+...+.... ..++++||..+|+.....+.+|..+..+...|+.+|...|.+
T Consensus        58 h~a~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~-~~~~~~ss~~v~~~~~~~~~~e~~~~~~~~~~~~~k~~~e~~  136 (281)
T d1vl0a_          58 NCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVG-AEIVQISTDYVFDGEAKEPITEFDEVNPQSAYGKTKLEGENF  136 (281)
T ss_dssp             ECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHT-CEEEEEEEGGGSCSCCSSCBCTTSCCCCCSHHHHHHHHHHHH
T ss_pred             eeccccccccccccchhhccccccccccccccccccc-ccccccccceeeeccccccccccccccchhhhhhhhhHHHHH
Confidence            9998765433444555566666666777777776665 578888998999888888899999999999999999999988


Q ss_pred             HHHHhhcCCCcEEEEecC
Q 025786          231 ILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       231 ~~~~~~~~gi~~~~v~Pf  248 (248)
                      ++.    ++.+.+++||.
T Consensus       137 ~~~----~~~~~~i~R~~  150 (281)
T d1vl0a_         137 VKA----LNPKYYIVRTA  150 (281)
T ss_dssp             HHH----HCSSEEEEEEC
T ss_pred             HHH----hCCCcccccee
Confidence            765    47788999984

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=99.84  E-value=2.2e-20  Score=152.79  Aligned_cols=164  Identities=18%  Similarity=0.167  Sum_probs=105.0

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCc-chhhhhhhhhcCCCCceEEEEccCCC----HHHHHHHhhc--
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGN-IGAVKVLQELFPEPGRLQFIYADLGD----AKAVNKFFSE--  143 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~Dl~~----~~~~~~~~~~--  143 (248)
                      .++|||||++|||+++|++|+++|++|++++|+.++. +++.+.+....  ..+...++.|+.+    .+.+.+++++  
T Consensus         2 ~vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (266)
T d1mxha_           2 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAAR--AGSAVLCKGDLSLSSSLLDCCEDIIDCSF   79 (266)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHS--TTCEEEEECCCSSSTTHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhc--CCceEEEecccccchhHHHHHHHHHHHHH
Confidence            4799999999999999999999999999999754322 22222333322  3456667766644    4455555443  


Q ss_pred             ---CCCCEEEEcccccccCCCCCC-----------chhhH----hhhHHHHHHHHHHHHH---------cCCCEEEEecc
Q 025786          144 ---NAFDAVMHFAAVAYVGESTLD-----------PLKYY----HNITSNTLVVLESMAR---------HGVDTLIYSST  196 (248)
Q Consensus       144 ---~~iD~li~~Ag~~~~~~~~~~-----------~~~~~----~~~~~~~~~ll~~~~~---------~~~~~iV~~SS  196 (248)
                         +++|++|||||+.........           .+..+    ..+.............         .....++++||
T Consensus        80 ~~~g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (266)
T d1mxha_          80 RAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCD  159 (266)
T ss_dssp             HHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECC
T ss_pred             HHhCCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccchhhhh
Confidence               789999999998654332111           01111    1111111111111111         12346667777


Q ss_pred             ceecCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          197 CATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       197 ~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                      ....           .+.+....|+.||++.+.+++.++.+   +||+++.|+|
T Consensus       160 ~~~~-----------~~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~P  202 (266)
T d1mxha_         160 AMTD-----------LPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAP  202 (266)
T ss_dssp             GGGG-----------SCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE
T ss_pred             cccc-----------ccCcchhhhhhhHHHHhhhHHHHHHHhCccCcEEEEecc
Confidence            6554           24445789999999999999999987   6899999998

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=99.83  E-value=6.8e-20  Score=150.13  Aligned_cols=163  Identities=12%  Similarity=0.070  Sum_probs=106.2

Q ss_pred             CCceEEEEecC--CchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc--
Q 025786           68 EGVTHVLVTGG--AGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE--  143 (248)
Q Consensus        68 ~~~k~vlITGa--sg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--  143 (248)
                      .+ |++|||||  +.|||+++|++|+++|++|++++|+.   ++..+.+.+.  .+.+...+++|+++.+++.++++.  
T Consensus         5 ~g-K~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~---~~~~~~~~~~--~~~~~~~~~~dv~~~~~~~~~~~~v~   78 (268)
T d2h7ma1           5 DG-KRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDR---LRLIQRITDR--LPAKAPLLELDVQNEEHLASLAGRVT   78 (268)
T ss_dssp             TT-CEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSC---HHHHHHHHTT--SSSCCCEEECCTTCHHHHHHHHHHHH
T ss_pred             CC-CEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCCh---HHHHHHHHHH--cCCceeeEeeecccccccccccchhh
Confidence            45 99999995  56899999999999999999998643   3333333322  245677899999999877666544  


Q ss_pred             ------CCCCEEEEcccccccCCC-----CCCchhhHhhhHHH----HHHHHHHHHH-cCCCEEEEeccceecCCCCCCC
Q 025786          144 ------NAFDAVMHFAAVAYVGES-----TLDPLKYYHNITSN----TLVVLESMAR-HGVDTLIYSSTCATYGEPEKMP  207 (248)
Q Consensus       144 ------~~iD~li~~Ag~~~~~~~-----~~~~~~~~~~~~~~----~~~ll~~~~~-~~~~~iV~~SS~~~~g~~~~~~  207 (248)
                            +.+|++|||||.......     .+...+.+...+..    .......... .+.+.+++++|....       
T Consensus        79 ~~~~~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~-------  151 (268)
T d2h7ma1          79 EAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPS-------  151 (268)
T ss_dssp             HHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCS-------
T ss_pred             hccccCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhccccccccccccccc-------
Confidence                  568999999997532221     12222223222221    1111111111 112334444443332       


Q ss_pred             CCCCCCCCCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          208 ITEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       208 ~~e~~~~~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                          .+.+....|+.||++.+.+++.++.+   +||++++|+|
T Consensus       152 ----~~~p~~~~y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~P  190 (268)
T d2h7ma1         152 ----RAMPAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAA  190 (268)
T ss_dssp             ----SCCTTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEE
T ss_pred             ----ccCcccchhhccccchhhccccchhhhhccCCcceEEec
Confidence                23344678999999999999999988   6899999998

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=3.3e-20  Score=149.12  Aligned_cols=146  Identities=12%  Similarity=0.040  Sum_probs=114.2

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC--EEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~  148 (248)
                      |+||||||||+||++++++|+++|.  +|++++|++.+....         ....+....+|+.+.+++.+.++  ++|+
T Consensus        15 k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~---------~~~~i~~~~~D~~~~~~~~~~~~--~~d~   83 (232)
T d2bkaa1          15 KSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEE---------AYKNVNQEVVDFEKLDDYASAFQ--GHDV   83 (232)
T ss_dssp             CEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSG---------GGGGCEEEECCGGGGGGGGGGGS--SCSE
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhccc---------ccceeeeeeeccccccccccccc--cccc
Confidence            7899999999999999999999995  899998754332210         02356777889988888877776  6899


Q ss_pred             EEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCCChHHHHHHHHH
Q 025786          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAE  228 (248)
Q Consensus       149 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e  228 (248)
                      +||++|....   .....+++..+..++.++++.+.+.+.++||++||...+..             +...|+.+|..+|
T Consensus        84 vi~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~a~~~~v~~fi~~Ss~~~~~~-------------~~~~Y~~~K~~~E  147 (232)
T d2bkaa1          84 GFCCLGTTRG---KAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKS-------------SNFLYLQVKGEVE  147 (232)
T ss_dssp             EEECCCCCHH---HHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTT-------------CSSHHHHHHHHHH
T ss_pred             cccccccccc---ccchhhhhhhcccccceeeecccccCccccccCCccccccC-------------ccchhHHHHHHhh
Confidence            9999986421   22345567788888999999999999999999999776532             2457999999999


Q ss_pred             HHHHHHhhcCCC-cEEEEec
Q 025786          229 DIILDFSKNSDM-AVLQCHR  247 (248)
Q Consensus       229 ~l~~~~~~~~gi-~~~~v~P  247 (248)
                      ..++.    .+. .++++||
T Consensus       148 ~~l~~----~~~~~~~IlRP  163 (232)
T d2bkaa1         148 AKVEE----LKFDRYSVFRP  163 (232)
T ss_dssp             HHHHT----TCCSEEEEEEC
T ss_pred             hcccc----ccccceEEecC
Confidence            87754    455 4889998

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=99.81  E-value=5.4e-19  Score=146.25  Aligned_cols=162  Identities=25%  Similarity=0.377  Sum_probs=116.3

Q ss_pred             EEEecCCchhHHHHHHHHHHCCC-EEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHH-HHhhc---CCCC
Q 025786           73 VLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVN-KFFSE---NAFD  147 (248)
Q Consensus        73 vlITGasg~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~-~~~~~---~~iD  147 (248)
                      |||||||||||++++++|+++|+ +|+++++..+... ... +.+.         ..+|..+.+.+. .....   ..++
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~-~~~-~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~   70 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK-FVN-LVDL---------NIADYMDKEDFLIQIMAGEEFGDVE   70 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGG-GHH-HHTS---------CCSEEEEHHHHHHHHHTTCCCSSCC
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcch-hhc-cccc---------chhhhccchHHHHHHhhhhcccchh
Confidence            89999999999999999999996 7888875433221 111 1111         112333333332 22221   4688


Q ss_pred             EEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCCChHHHHHHHH
Q 025786          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMA  227 (248)
Q Consensus       148 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~  227 (248)
                      +++|.|+....  ...........+..++..++..+...+.+ +|+.||..+++........++.+..|.+.|+.+|.++
T Consensus        71 ~i~~~aa~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~i~-~v~~ss~~~~~~~~~~~~~~~~~~~~~~~Y~~~K~~~  147 (307)
T d1eq2a_          71 AIFHEGACSST--TEWDGKYMMDNNYQYSKELLHYCLEREIP-FLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFLF  147 (307)
T ss_dssp             EEEECCSCCCT--TCCCHHHHHHHTHHHHHHHHHHHHHHTCC-EEEEEEGGGGTTCCSCBCSSGGGCCCSSHHHHHHHHH
T ss_pred             hhhhhcccccc--ccccccccccccccccccccccccccccc-ccccccccccccccccccccccccccccccccccchh
Confidence            99999985432  23345566777788899999999888875 6666666666655555566677778899999999999


Q ss_pred             HHHHHHHhhcCCCcEEEEecC
Q 025786          228 EDIILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       228 e~l~~~~~~~~gi~~~~v~Pf  248 (248)
                      |.+++.+.++++++++++||+
T Consensus       148 e~~~~~~~~~~~~~~~~~r~~  168 (307)
T d1eq2a_         148 DEYVRQILPEANSQIVGFRYF  168 (307)
T ss_dssp             HHHHHHHGGGCSSCEEEEEEC
T ss_pred             hhhccccccccccccccccce
Confidence            999999999999999999986

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.80  E-value=2e-19  Score=151.83  Aligned_cols=167  Identities=11%  Similarity=0.012  Sum_probs=104.1

Q ss_pred             ceEEEEec--CCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhh-----hhc----CCCCceEEEEc---------
Q 025786           70 VTHVLVTG--GAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQ-----ELF----PEPGRLQFIYA---------  129 (248)
Q Consensus        70 ~k~vlITG--asg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-----~~~----~~~~~~~~~~~---------  129 (248)
                      .|++||||  +++|||++++++|+++|++|++.++.............     +..    ..........+         
T Consensus         2 ~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (329)
T d1uh5a_           2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAND   81 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGGG
T ss_pred             CcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhcc
Confidence            38999999  66899999999999999999998864322111110000     000    00111223333         


Q ss_pred             -----------cCCCHHHHHHHhhc-----CCCCEEEEccccccc--CCCCCCchhhHhhhHHH----HHHHHHHHHH--
Q 025786          130 -----------DLGDAKAVNKFFSE-----NAFDAVMHFAAVAYV--GESTLDPLKYYHNITSN----TLVVLESMAR--  185 (248)
Q Consensus       130 -----------Dl~~~~~~~~~~~~-----~~iD~li~~Ag~~~~--~~~~~~~~~~~~~~~~~----~~~ll~~~~~--  185 (248)
                                 |+++.++++++++.     +++|+||||||....  .+..+.+.+.|+..+..    ...+...+.+  
T Consensus        82 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~~m  161 (329)
T d1uh5a_          82 IDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIM  161 (329)
T ss_dssp             CCHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGE
T ss_pred             cchhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHhhc
Confidence                       45555555555543     799999999997542  23334444455443332    2223333222  


Q ss_pred             cCCCEEEEeccceecCCCCCCCCCCCCCCC-CCChHHHHHHHHHHHHHHHhhc----CCCcEEEEec
Q 025786          186 HGVDTLIYSSTCATYGEPEKMPITEETPQA-PINPYGKAKKMAEDIILDFSKN----SDMAVLQCHR  247 (248)
Q Consensus       186 ~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~-~~~~Y~~sK~a~e~l~~~~~~~----~gi~~~~v~P  247 (248)
                      ...++||++||.+...           ..+ +...|+.||++.+.|++.++.|    +||+|++|.|
T Consensus       162 ~~~GsIv~iss~~~~~-----------~~p~y~~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~P  217 (329)
T d1uh5a_         162 KPQSSIISLTYHASQK-----------VVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISA  217 (329)
T ss_dssp             EEEEEEEEEECGGGTS-----------CCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEE
T ss_pred             ccccccccceeehhcc-----------cccccchhhhhhhccccccchhhHHHHhcccCcEEEEEec
Confidence            1246899999876642           222 2567999999999999999876    4899999998

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.77  E-value=4.8e-18  Score=138.02  Aligned_cols=155  Identities=13%  Similarity=0.090  Sum_probs=100.3

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc------
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE------  143 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~------  143 (248)
                      ||+||||||++|||+++|++|+++|++|++++|+...                    ...|+.+.+..+....+      
T Consensus         1 mkVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~--------------------~~~d~~~~~~~~~~~~~~~~~~~   60 (257)
T d1fjha_           1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAE--------------------VIADLSTAEGRKQAIADVLAKCS   60 (257)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSS--------------------EECCTTSHHHHHHHHHHHHTTCT
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHH--------------------HHHHhcCHHHHHHHHHHHHHHhC
Confidence            6999999999999999999999999999999864211                    24577777665544332      


Q ss_pred             CCCCEEEEcccccccCCCCCCchhhHhhhHHH----HHHHHHHHHHcCCCEEEEeccceecCCC-CCCCCC---------
Q 025786          144 NAFDAVMHFAAVAYVGESTLDPLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEP-EKMPIT---------  209 (248)
Q Consensus       144 ~~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~----~~~ll~~~~~~~~~~iV~~SS~~~~g~~-~~~~~~---------  209 (248)
                      +.+|+++||||+....   .........+..+    ....++.+.+.....+.++++....... ...+..         
T Consensus        61 ~~id~lv~~Ag~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  137 (257)
T d1fjha_          61 KGMDGLVLCAGLGPQT---KVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEA  137 (257)
T ss_dssp             TCCSEEEECCCCCTTC---SSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHH
T ss_pred             CCCcEEEEcCCCCCcH---HHHHHHHHHHHHHHHHHHHHhhhhhhhhccCcceeeeeccccchhhhhhhhhhhccCCcEE
Confidence            4699999999975322   2222223333333    2334555555555566666553322110 000000         


Q ss_pred             -------CCCCCCCCChHHHHHHHHHHHHHHHhhc---CCCcEEEEec
Q 025786          210 -------EETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVLQCHR  247 (248)
Q Consensus       210 -------e~~~~~~~~~Y~~sK~a~e~l~~~~~~~---~gi~~~~v~P  247 (248)
                             .....++..+|+.||++.+.|++.++.+   +||++++|.|
T Consensus       138 ~i~s~~~~~~~~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~P  185 (257)
T d1fjha_         138 KARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAP  185 (257)
T ss_dssp             HHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEE
T ss_pred             EEeeehhccCCCcchHHHHHHhhhhhcccccccccccccccccccccc
Confidence                   0001112346999999999999999977   6899999998

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.77  E-value=7.9e-19  Score=145.76  Aligned_cols=170  Identities=14%  Similarity=0.015  Sum_probs=97.9

Q ss_pred             CCCceEEEEecCCc--hhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhh------hhhcCCCC--c-eEEEEcc--C--
Q 025786           67 EEGVTHVLVTGGAG--YIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVL------QELFPEPG--R-LQFIYAD--L--  131 (248)
Q Consensus        67 ~~~~k~vlITGasg--~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~--~-~~~~~~D--l--  131 (248)
                      +++ |++|||||+|  |||+++|+.|+++|++|++++|+...........      ........  . -....+|  +  
T Consensus         6 L~g-K~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (297)
T d1d7oa_           6 LRG-KRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFDN   84 (297)
T ss_dssp             CTT-CEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCCS
T ss_pred             CCC-CEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhhccc
Confidence            355 9999999886  9999999999999999999986432111100000      00000000  1 1122222  1  


Q ss_pred             ----------------CCHHHHHHHhhc-----CCCCEEEEccccccc--CCCCCCchhhHhhhH----HHHHHHHHHHH
Q 025786          132 ----------------GDAKAVNKFFSE-----NAFDAVMHFAAVAYV--GESTLDPLKYYHNIT----SNTLVVLESMA  184 (248)
Q Consensus       132 ----------------~~~~~~~~~~~~-----~~iD~li~~Ag~~~~--~~~~~~~~~~~~~~~----~~~~~ll~~~~  184 (248)
                                      ++..++++++++     +++|+||||||....  .+..+.+.+.|...+    .+...+...+.
T Consensus        85 ~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~  164 (297)
T d1d7oa_          85 PEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFL  164 (297)
T ss_dssp             GGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHG
T ss_pred             cccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhhhhhhhhhHHH
Confidence                            222233333332     789999999997532  233334444444433    33333333333


Q ss_pred             Hc--CCCEEEEeccceecCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHhhc----CCCcEEEEec
Q 025786          185 RH--GVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKN----SDMAVLQCHR  247 (248)
Q Consensus       185 ~~--~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e~l~~~~~~~----~gi~~~~v~P  247 (248)
                      ..  ..+.++.+++.+...          ...+....|+.+|++++.+++.++.+    +||++++|.|
T Consensus       165 ~~~~~~g~~~~~~~~~~~~----------~~~~~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~P  223 (297)
T d1d7oa_         165 PIMNPGGASISLTYIASER----------IIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISA  223 (297)
T ss_dssp             GGEEEEEEEEEEECGGGTS----------CCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEE
T ss_pred             HHhhcCCcceeeeehhhcc----------cccccccceecccccccccccccchhccccceEEeccccc
Confidence            22  224555555544321          12234568999999999998877665    5799999998

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.73  E-value=1.7e-17  Score=130.91  Aligned_cols=141  Identities=14%  Similarity=0.140  Sum_probs=102.7

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC--EEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~  148 (248)
                      |+||||||||+||++++++|+++|+  +|++..|....             ...+   +..++.|..++.+.+. ..+|+
T Consensus         3 KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~-------------~~~~---~~~~~~d~~~~~~~~~-~~~d~   65 (212)
T d2a35a1           3 KRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA-------------EHPR---LDNPVGPLAELLPQLD-GSIDT   65 (212)
T ss_dssp             CEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC-------------CCTT---EECCBSCHHHHGGGCC-SCCSE
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchh-------------hccc---ccccccchhhhhhccc-cchhe
Confidence            8999999999999999999999998  55554442211             0112   3445555555544333 46899


Q ss_pred             EEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCCChHHHHHHHHH
Q 025786          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAE  228 (248)
Q Consensus       149 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e  228 (248)
                      +||++|.....  ......+...+...+.++++.+++.+.+++|++||..+++.             +.+.|..+|..+|
T Consensus        66 vi~~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~a~~~~v~~~i~~Ss~~~~~~-------------~~~~y~~~K~~~E  130 (212)
T d2a35a1          66 AFCCLGTTIKE--AGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADAK-------------SSIFYNRVKGELE  130 (212)
T ss_dssp             EEECCCCCHHH--HSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTT-------------CSSHHHHHHHHHH
T ss_pred             eeeeeeeeccc--cccccccccchhhhhhhcccccccccccccccccccccccc-------------cccchhHHHHHHh
Confidence            99999864321  22345667788888999999999999999999999777632             3568999999999


Q ss_pred             HHHHHHhhcCCC-cEEEEec
Q 025786          229 DIILDFSKNSDM-AVLQCHR  247 (248)
Q Consensus       229 ~l~~~~~~~~gi-~~~~v~P  247 (248)
                      +.++.    .+. +++++||
T Consensus       131 ~~l~~----~~~~~~~I~Rp  146 (212)
T d2a35a1         131 QALQE----QGWPQLTIARP  146 (212)
T ss_dssp             HHHTT----SCCSEEEEEEC
T ss_pred             hhccc----cccccceeeCC
Confidence            87753    455 5899998

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.72  E-value=3.9e-17  Score=130.13  Aligned_cols=158  Identities=15%  Similarity=0.120  Sum_probs=107.7

Q ss_pred             CceEEEEecCCchhHHHHHHHHHHCCCEEEE--EecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCC
Q 025786           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTI--VDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAF  146 (248)
Q Consensus        69 ~~k~vlITGasg~IG~~la~~L~~~G~~V~~--~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~i  146 (248)
                      +|++||||||||+||++++++|+++|++|.+  +.|++.   .    ...+   ..+++++.+|+++.+++.++++  ++
T Consensus         2 ~~~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~---~----~~~~---~~~~~~~~~d~~~~~~~~~~~~--~~   69 (252)
T d2q46a1           2 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQ---G----KEKI---GGEADVFIGDITDADSINPAFQ--GI   69 (252)
T ss_dssp             SCCEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHH---H----HHHT---TCCTTEEECCTTSHHHHHHHHT--TC
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHH---H----HHhc---cCCcEEEEeeeccccccccccc--cc
Confidence            4699999999999999999999999986544  444221   1    1111   2467889999999999999987  68


Q ss_pred             CEEEEcccccccCCC-------------CCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCC
Q 025786          147 DAVMHFAAVAYVGES-------------TLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETP  213 (248)
Q Consensus       147 D~li~~Ag~~~~~~~-------------~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~  213 (248)
                      |+|||+|+.......             ..........+..++.+++........+...+.|+...+.....      ..
T Consensus        70 d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~------~~  143 (252)
T d2q46a1          70 DALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNPDHP------LN  143 (252)
T ss_dssp             SEEEECCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTCTTCG------GG
T ss_pred             eeeEEEEeeccccccccchhhhhhcccccccchhhhccccccceeeccccccccccccccccccccCCCCcc------cc
Confidence            999999986432111             11233344566678888998888888888888888555421110      01


Q ss_pred             CCCCChHHHHHHHHHHHHHHHhhcCCCcEEEEecC
Q 025786          214 QAPINPYGKAKKMAEDIILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       214 ~~~~~~Y~~sK~a~e~l~~~~~~~~gi~~~~v~Pf  248 (248)
                      ..+...|...|.+.    ..+..+.|++++++||+
T Consensus       144 ~~~~~~~~~~~~~~----~~~~~~~~~~~~ilRp~  174 (252)
T d2q46a1         144 KLGNGNILVWKRKA----EQYLADSGTPYTIIRAG  174 (252)
T ss_dssp             GGGGCCHHHHHHHH----HHHHHHSSSCEEEEEEC
T ss_pred             cccccchhhhhhhh----hhhhhcccccceeecce
Confidence            11233455555444    34456689999999995

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=99.67  E-value=7.3e-16  Score=127.32  Aligned_cols=153  Identities=16%  Similarity=0.108  Sum_probs=107.4

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcch-hhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIG-AVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~l  149 (248)
                      ++||||||||+||++++++|+++|++|+++.|....... ..+......  ..+++++++|++|.+++.+.+.  +.+.+
T Consensus         4 ~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~--~~~v~~v~~d~~d~~~~~~~~~--~~~~~   79 (312)
T d1qyda_           4 SRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFK--QLGAKLIEASLDDHQRLVDALK--QVDVV   79 (312)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHH--TTTCEEECCCSSCHHHHHHHHT--TCSEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhc--cCCcEEEEeecccchhhhhhcc--Ccchh
Confidence            679999999999999999999999999999886443321 112222222  3468899999999999998887  67999


Q ss_pred             EEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCCChHHHHHHHHHH
Q 025786          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAED  229 (248)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e~  229 (248)
                      +++++.....           .+...+.+++..+.+.+..++++.||.+.+..      .+..+..+...|..+|..++.
T Consensus        80 ~~~~~~~~~~-----------~~~~~~~~~l~~a~~~~~~~~v~~Ss~g~~~~------~~~~~~~~~~~~~~~~~~~~~  142 (312)
T d1qyda_          80 ISALAGGVLS-----------HHILEQLKLVEAIKEAGNIKRFLPSEFGMDPD------IMEHALQPGSITFIDKRKVRR  142 (312)
T ss_dssp             EECCCCSSSS-----------TTTTTHHHHHHHHHHSCCCSEEECSCCSSCTT------SCCCCCSSTTHHHHHHHHHHH
T ss_pred             hhhhhhcccc-----------cchhhhhHHHHHHHHhcCCcEEEEeeccccCC------CcccccchhhhhhHHHHHHHH
Confidence            9998753221           22333556677777777677888887655432      223344556677777776665


Q ss_pred             HHHHHhhcCCCcEEEEecC
Q 025786          230 IILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       230 l~~~~~~~~gi~~~~v~Pf  248 (248)
                      +    ..+.+++++++||.
T Consensus       143 ~----~~~~~~~~~i~r~~  157 (312)
T d1qyda_         143 A----IEAASIPYTYVSSN  157 (312)
T ss_dssp             H----HHHTTCCBCEEECC
T ss_pred             h----hcccccceEEeccc
Confidence            4    45578889998873

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=99.65  E-value=2.8e-18  Score=133.76  Aligned_cols=82  Identities=16%  Similarity=0.194  Sum_probs=66.3

Q ss_pred             CCceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCC
Q 025786           68 EGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFD  147 (248)
Q Consensus        68 ~~~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD  147 (248)
                      .+ |+|+||||+||||+++++.|+++|++|++++|+.++.++..+.+.+.    .++.+..+|++|.+++++++.  ++|
T Consensus        22 ~g-K~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~d~~~~~~~~~~~~--~iD   94 (191)
T d1luaa1          22 KG-KKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKR----FKVNVTAAETADDASRAEAVK--GAH   94 (191)
T ss_dssp             TT-CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH----HTCCCEEEECCSHHHHHHHTT--TCS
T ss_pred             CC-CEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhc----cchhhhhhhcccHHHHHHHhc--CcC
Confidence            45 99999999999999999999999999999997654444333333322    245568899999999999886  799


Q ss_pred             EEEEccccc
Q 025786          148 AVMHFAAVA  156 (248)
Q Consensus       148 ~li~~Ag~~  156 (248)
                      +||||||+.
T Consensus        95 ilin~Ag~g  103 (191)
T d1luaa1          95 FVFTAGAIG  103 (191)
T ss_dssp             EEEECCCTT
T ss_pred             eeeecCccc
Confidence            999999964

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=99.64  E-value=1.7e-15  Score=124.32  Aligned_cols=148  Identities=13%  Similarity=0.172  Sum_probs=101.7

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhh--hhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVK--VLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~--~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~  148 (248)
                      |+||||||||+||++++++|+++|++|++++|.........+  .+..+.  ...+.++.+|+.+.+.+.+.++  ..|.
T Consensus         4 kKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~--~~~~   79 (307)
T d1qyca_           4 SRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFK--ASGANIVHGSIDDHASLVEAVK--NVDV   79 (307)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHH--TTTCEEECCCTTCHHHHHHHHH--TCSE
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhc--cCCcEEEEeecccchhhhhhhh--hcee
Confidence            789999999999999999999999999999986554332221  122222  2457889999999999988887  6799


Q ss_pred             EEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCCChHHHHHHHHH
Q 025786          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAE  228 (248)
Q Consensus       149 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e  228 (248)
                      +||+++...               ...+..+++++...+..++++.||......       +.....+...|...|...+
T Consensus        80 vi~~~~~~~---------------~~~~~~~~~a~~~~~~~~~~~~s~~~~~~~-------~~~~~~~~~~~~~~~~~~~  137 (307)
T d1qyca_          80 VISTVGSLQ---------------IESQVNIIKAIKEVGTVKRFFPSEFGNDVD-------NVHAVEPAKSVFEVKAKVR  137 (307)
T ss_dssp             EEECCCGGG---------------SGGGHHHHHHHHHHCCCSEEECSCCSSCTT-------SCCCCTTHHHHHHHHHHHH
T ss_pred             eeecccccc---------------cchhhHHHHHHHHhccccceeeeccccccc-------ccccccccccccccccccc
Confidence            999987431               123445667777777778888887544321       1122222334444444444


Q ss_pred             HHHHHHhhcCCCcEEEEecC
Q 025786          229 DIILDFSKNSDMAVLQCHRF  248 (248)
Q Consensus       229 ~l~~~~~~~~gi~~~~v~Pf  248 (248)
                      .    +..+.+++++++||+
T Consensus       138 ~----~~~~~~~~~~i~r~~  153 (307)
T d1qyca_         138 R----AIEAEGIPYTYVSSN  153 (307)
T ss_dssp             H----HHHHHTCCBEEEECC
T ss_pred             c----hhhccCCCceecccc
Confidence            4    444568999999984

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=99.51  E-value=2.5e-13  Score=114.45  Aligned_cols=144  Identities=13%  Similarity=0.045  Sum_probs=101.2

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHH-HHHHhhcCCCCEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKA-VNKFFSENAFDAV  149 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~-~~~~~~~~~iD~l  149 (248)
                      |+|+||||||+||++++++|+++|++|+++.|+..+..  .+.+..    ..+++++++|+.|..+ +..++.  .+|.+
T Consensus         4 ktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~--~~~~~~----~~~v~~~~gD~~d~~~~~~~a~~--~~~~~   75 (350)
T d1xgka_           4 KTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLI--AEELQA----IPNVTLFQGPLLNNVPLMDTLFE--GAHLA   75 (350)
T ss_dssp             CCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHH--HHHHHT----STTEEEEESCCTTCHHHHHHHHT--TCSEE
T ss_pred             CEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhh--hhhhcc----cCCCEEEEeeCCCcHHHHHHHhc--CCceE
Confidence            89999999999999999999999999999988654321  111111    2468999999998654 555665  67888


Q ss_pred             EEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEeccceecCCCCCCCCCCCCCCCCCChHHHHHHHHHH
Q 025786          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAED  229 (248)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e~  229 (248)
                      +++....            ...+...+.++++++.+.+..++|+.||......         ....+..+|..+|...+.
T Consensus        76 ~~~~~~~------------~~~~~~~~~~~~~aa~~agv~~~v~~Ss~~~~~~---------~~~~~~~~~~~~k~~~~~  134 (350)
T d1xgka_          76 FINTTSQ------------AGDEIAIGKDLADAAKRAGTIQHYIYSSMPDHSL---------YGPWPAVPMWAPKFTVEN  134 (350)
T ss_dssp             EECCCST------------TSCHHHHHHHHHHHHHHHSCCSEEEEEECCCGGG---------TSSCCCCTTTHHHHHHHH
T ss_pred             Eeecccc------------cchhhhhhhHHHHHHHHhCCCceEEEeecccccc---------CCcccchhhhhhHHHHHH
Confidence            7764321            1123445677888998888878888888654321         223345567888988777


Q ss_pred             HHHHHhhcCCCcEEEEec
Q 025786          230 IILDFSKNSDMAVLQCHR  247 (248)
Q Consensus       230 l~~~~~~~~gi~~~~v~P  247 (248)
                      +..    +.+++.++++|
T Consensus       135 ~~~----~~~~~~~~vr~  148 (350)
T d1xgka_         135 YVR----QLGLPSTFVYA  148 (350)
T ss_dssp             HHH----TSSSCEEEEEE
T ss_pred             HHH----hhccCceeeee
Confidence            654    45788888887

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.24  E-value=3.5e-07  Score=69.10  Aligned_cols=45  Identities=20%  Similarity=0.258  Sum_probs=35.4

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhh
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQ  115 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~  115 (248)
                      |+|.|+||+|+||+++++.|+++|++|++.+|++.+.+++.+.+.
T Consensus         1 Mki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~l~~~i~   45 (212)
T d1jaya_           1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYR   45 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHH
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHH
Confidence            457788999999999999999999999999976544444444333

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=98.21  E-value=1.2e-05  Score=58.10  Aligned_cols=117  Identities=12%  Similarity=0.104  Sum_probs=72.6

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCC--CEEEEEecCCCC--cchhhhhhhhh-cCCCCceEEEEccCCCHHHHHHHhhcCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDS--YRVTIVDNLSRG--NIGAVKVLQEL-FPEPGRLQFIYADLGDAKAVNKFFSENA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G--~~V~~~~r~~~~--~~~~~~~~~~~-~~~~~~~~~~~~Dl~~~~~~~~~~~~~~  145 (248)
                      |+|.|.||+|.+|..++..|+.+|  .+++++|+...-  .+.....+... ............--.|++++    +  +
T Consensus         1 MKV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~d~~~l----~--~   74 (145)
T d1hyea1           1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDENLRII----D--E   74 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCGGGG----T--T
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhcccccccCCccccCCcchHHHh----c--c
Confidence            469999999999999999999998  489999864211  11111122221 11122222211111133322    2  5


Q ss_pred             CCEEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEec
Q 025786          146 FDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSS  195 (248)
Q Consensus       146 iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~S  195 (248)
                      .|+||-.||...  ....+..+.+..|......+.+.+.+...+.|+.+|
T Consensus        75 aDvVVitAG~~~--~~g~sR~dl~~~Na~iv~~i~~~i~~~~~~~iivVt  122 (145)
T d1hyea1          75 SDVVIITSGVPR--KEGMSRMDLAKTNAKIVGKYAKKIAEICDTKIFVIT  122 (145)
T ss_dssp             CSEEEECCSCCC--CTTCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECS
T ss_pred             ceEEEEeccccc--CCCCChhhhhhhhHHHHHHHHHHHhccCCCeEEEEc
Confidence            799999999643  223355677888888888899999887766666554

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=98.15  E-value=7.1e-06  Score=59.47  Aligned_cols=114  Identities=15%  Similarity=0.174  Sum_probs=67.2

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCC--CEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDS--YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~  148 (248)
                      ++|.|.|+ |.+|..++..|+.+|  .+|+++|+.....+.....+...............|   ++++    +  +.|+
T Consensus         6 ~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d---~~~~----~--~adi   75 (146)
T d1ez4a1           6 QKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGE---YSDC----K--DADL   75 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECC---GGGG----T--TCSE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeecc---HHHh----c--cccE
Confidence            68888895 999999999999988  589999864322211111122111112223344444   3332    2  6799


Q ss_pred             EEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEecc
Q 025786          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSST  196 (248)
Q Consensus       149 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS  196 (248)
                      +|..||....  ...+..+....|......+.+.+.+.+++.++.+.|
T Consensus        76 vvitag~~~~--~g~~r~~l~~~N~~i~~~~~~~i~~~~p~aivivvt  121 (146)
T d1ez4a1          76 VVITAGAPQK--PGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAA  121 (146)
T ss_dssp             EEECCCC------------CHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             EEEecccccC--CCCCHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEeC
Confidence            9999986432  223445566777777888899888887665555544

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.15  E-value=3.6e-05  Score=55.47  Aligned_cols=114  Identities=19%  Similarity=0.197  Sum_probs=72.7

Q ss_pred             EEEEecCCchhHHHHHHHHHHCCC--EEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 025786           72 HVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (248)
Q Consensus        72 ~vlITGasg~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~l  149 (248)
                      +|.|+||+|.+|++++..|+.+|.  +++++|...   .+  ....++..... ......-+ ...+..+.++  +.|+|
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~---~~--~~a~Dl~~~~~-~~~~~~~~-~~~~~~~~~~--~aDiv   72 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH---TP--GVAADLSHIET-RATVKGYL-GPEQLPDCLK--GCDVV   72 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS---HH--HHHHHHTTSSS-SCEEEEEE-SGGGHHHHHT--TCSEE
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEeccc---cc--hhhHHHhhhhh-hcCCCeEE-cCCChHHHhC--CCCEE
Confidence            689999999999999999999885  788888532   11  11122221111 11111111 2233444444  68999


Q ss_pred             EEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEecc
Q 025786          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSST  196 (248)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS  196 (248)
                      |..||...  ....+..+.+..|......+++.+.+.++..+|.+-|
T Consensus        73 Vitag~~~--~~g~sR~~ll~~N~~i~~~i~~~i~~~~p~~iiivvt  117 (144)
T d1mlda1          73 VIPAGVPR--KPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIIS  117 (144)
T ss_dssp             EECCSCCC--CTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred             EECCCcCC--CCCCCcchHHHHHHHHHHHHHHHHHhcCCCeEEEEec
Confidence            99999643  2234556778888888999999999987654444444

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=98.11  E-value=3.8e-06  Score=63.17  Aligned_cols=77  Identities=18%  Similarity=0.204  Sum_probs=53.2

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li  150 (248)
                      .+|||+||+|++|...++.....|++|+.++++..    ..+..++.   +....+..-|-...+.+.+.....++|+++
T Consensus        31 ~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~----~~~~~~~~---Ga~~vi~~~~~~~~~~~~~~~~~~Gvd~v~  103 (182)
T d1v3va2          31 ETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDE----KIAYLKQI---GFDAAFNYKTVNSLEEALKKASPDGYDCYF  103 (182)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHH----HHHHHHHT---TCSEEEETTSCSCHHHHHHHHCTTCEEEEE
T ss_pred             CEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHH----HHHHHHhh---hhhhhcccccccHHHHHHHHhhcCCCceeE
Confidence            89999999999999999999999999999885322    22333333   223333333444445555555546799999


Q ss_pred             Eccc
Q 025786          151 HFAA  154 (248)
Q Consensus       151 ~~Ag  154 (248)
                      ++.|
T Consensus       104 D~vG  107 (182)
T d1v3va2         104 DNVG  107 (182)
T ss_dssp             ESSC
T ss_pred             EecC
Confidence            9886

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=98.10  E-value=8.2e-06  Score=57.98  Aligned_cols=72  Identities=15%  Similarity=0.095  Sum_probs=53.1

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li  150 (248)
                      |+|+|.|+ |.+|+.+++.|.++|++|++++.++.   ...+ +.+.    ....++.+|.+|++.++++-- ...|.++
T Consensus         1 M~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~---~~~~-~~~~----~~~~vi~Gd~~~~~~l~~~~i-~~a~~vv   70 (132)
T d1lssa_           1 MYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKD---ICKK-ASAE----IDALVINGDCTKIKTLEDAGI-EDADMYI   70 (132)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHH---HHHH-HHHH----CSSEEEESCTTSHHHHHHTTT-TTCSEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCcceecCChh---hhhh-hhhh----hhhhhccCcccchhhhhhcCh-hhhhhhc
Confidence            57999997 99999999999999999999985332   2222 2221    146788999999998877632 2578877


Q ss_pred             Ec
Q 025786          151 HF  152 (248)
Q Consensus       151 ~~  152 (248)
                      -.
T Consensus        71 ~~   72 (132)
T d1lssa_          71 AV   72 (132)
T ss_dssp             EC
T ss_pred             cc
Confidence            53

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=98.02  E-value=8.7e-06  Score=60.38  Aligned_cols=73  Identities=19%  Similarity=0.216  Sum_probs=52.3

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li  150 (248)
                      |+|+|.|| |.+|+.+|+.|.++|++|++++|+..+.   .+..+    ..........+..+.......+.  ..|.++
T Consensus         3 K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a---~~l~~----~~~~~~~~~~~~~~~~~~~~~i~--~~~~~i   72 (182)
T d1e5qa1           3 KSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESA---KKLSA----GVQHSTPISLDVNDDAALDAEVA--KHDLVI   72 (182)
T ss_dssp             CEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHH---HHHHT----TCTTEEEEECCTTCHHHHHHHHT--TSSEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHH---HHHHh----cccccccccccccchhhhHhhhh--ccceeE
Confidence            88999986 9999999999999999999999754332   22222    22345556677777777777776  457777


Q ss_pred             Ecc
Q 025786          151 HFA  153 (248)
Q Consensus       151 ~~A  153 (248)
                      ...
T Consensus        73 ~~~   75 (182)
T d1e5qa1          73 SLI   75 (182)
T ss_dssp             ECS
T ss_pred             eec
Confidence            543

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=98.00  E-value=0.00018  Score=51.73  Aligned_cols=113  Identities=18%  Similarity=0.162  Sum_probs=70.6

Q ss_pred             eEEEEecCCchhHHHHHHHHHHC---CCEEEEEecCCCCcchhhhhhhhhcCC--CCceEEEEccCCCHHHHHHHhhcCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKD---SYRVTIVDNLSRGNIGAVKVLQELFPE--PGRLQFIYADLGDAKAVNKFFSENA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~---G~~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~  145 (248)
                      |+|.|+|++|.+|.+++..|+.+   +.++.+.|..+ ..   .....++...  ...... ..+-.++++++      +
T Consensus         1 MKV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~-~~---~g~a~Dl~h~~~~~~~~~-~~~~~~~~~~~------~   69 (145)
T d2cmda1           1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VT---PGVAVDLSHIPTAVKIKG-FSGEDATPALE------G   69 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSST-TH---HHHHHHHHTSCSSCEEEE-ECSSCCHHHHT------T
T ss_pred             CEEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccc-cc---hhHHHHHHCCccccCCcE-EEcCCCccccC------C
Confidence            57889999999999999888643   46899888532 21   1111222211  111222 22333444332      5


Q ss_pred             CCEEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCC-EEEEecc
Q 025786          146 FDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD-TLIYSST  196 (248)
Q Consensus       146 iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~-~iV~~SS  196 (248)
                      .|+||..||...  ....+-.+.+..|......+.+.+.+..+. .+|.+|.
T Consensus        70 aDvvvitaG~~~--k~g~~R~dl~~~N~~i~~~v~~~i~~~~p~aivivvtN  119 (145)
T d2cmda1          70 ADVVLISAGVRR--KPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIITN  119 (145)
T ss_dssp             CSEEEECCSCCC--CTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSS
T ss_pred             CCEEEECCCccC--CCCcchhhHHHHHHHHHHHHHHHHHhhCCCcEEEEccC
Confidence            799999999753  223355667788888888899999887655 4555554

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.99  E-value=3.9e-05  Score=55.54  Aligned_cols=114  Identities=16%  Similarity=0.231  Sum_probs=71.2

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCC--EEEEEecCCCCcchhhhhhhhhcC-CCCceEEEEccCCCHHHHHHHhhcCCC
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELFP-EPGRLQFIYADLGDAKAVNKFFSENAF  146 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~i  146 (248)
                      .++|.|.|+ |.+|..++..|+.+|.  +++++|+.+...+.....+..... ......+...|   ++++    +  +.
T Consensus         6 ~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d---~~~l----~--da   75 (148)
T d1ldna1           6 GARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGD---YDDC----R--DA   75 (148)
T ss_dssp             SCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECC---GGGT----T--TC
T ss_pred             CCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECC---HHHh----c--cc
Confidence            378999996 9999999999999885  799988643222211112222211 12233333333   3332    2  57


Q ss_pred             CEEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCC-EEEEec
Q 025786          147 DAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD-TLIYSS  195 (248)
Q Consensus       147 D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~-~iV~~S  195 (248)
                      |++|..||...  .......+.+..|......+.+.+.+..+. .++.+|
T Consensus        76 Dvvvitag~~~--~~~~~R~dl~~~N~~i~~~i~~~i~~~~p~a~~ivvt  123 (148)
T d1ldna1          76 DLVVICAGANQ--KPGETRLDLVDKNIAIFRSIVESVMASGFQGLFLVAT  123 (148)
T ss_dssp             SEEEECCSCCC--CTTTCSGGGHHHHHHHHHHHHHHHHHHTCCSEEEECS
T ss_pred             eeEEEeccccc--ccCcchhHHHHHHHHHHHHHHHHHHhhCCCceEEEec
Confidence            99999999643  223344566777877788889988887654 455554

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=97.97  E-value=2.3e-05  Score=58.84  Aligned_cols=82  Identities=12%  Similarity=0.110  Sum_probs=60.5

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC-EEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~l  149 (248)
                      ++|+|.|+ ||.|++++..|.+.|. +++++.|+..+.+++....+.+... ........|+.+.+++.+.+.  ..|+|
T Consensus        19 k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~dii   94 (182)
T d1vi2a1          19 KTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNEN-TDCVVTVTDLADQQAFAEALA--SADIL   94 (182)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHH-SSCEEEEEETTCHHHHHHHHH--TCSEE
T ss_pred             CEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhh-cCcceEeeecccccchhhhhc--cccee
Confidence            89999996 8999999999999998 6888887665555544443333211 123455788889888887776  67999


Q ss_pred             EEccccc
Q 025786          150 MHFAAVA  156 (248)
Q Consensus       150 i~~Ag~~  156 (248)
                      ||+....
T Consensus        95 IN~Tp~G  101 (182)
T d1vi2a1          95 TNGTKVG  101 (182)
T ss_dssp             EECSSTT
T ss_pred             ccccCCc
Confidence            9997653

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=97.96  E-value=5.5e-05  Score=54.32  Aligned_cols=113  Identities=16%  Similarity=0.225  Sum_probs=67.8

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC--EEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~  148 (248)
                      ++|.|.|+ |.+|..++..|+.++.  +++++|+.....+.....+...............   +++++    +  +.|+
T Consensus         2 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~---~~~~~----~--~adi   71 (142)
T d1y6ja1           2 SKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAG---DYSDV----K--DCDV   71 (142)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----CGGGG----T--TCSE
T ss_pred             CeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeC---cHHHh----C--CCce
Confidence            46778896 9999999999999975  8999997654433222222222122223332222   33322    2  5799


Q ss_pred             EEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCE-EEEec
Q 025786          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDT-LIYSS  195 (248)
Q Consensus       149 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~-iV~~S  195 (248)
                      +|-.||....  ...+..+....|......+.+.+.+..+.. ++.+|
T Consensus        72 vvitag~~~~--~~~~r~~l~~~N~~i~~~i~~~i~~~~p~ai~ivvt  117 (142)
T d1y6ja1          72 IVVTAGANRK--PGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVVS  117 (142)
T ss_dssp             EEECCCC--------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEECS
T ss_pred             EEEecccccC--cCcchhHHhhHHHHHHHHHHHHhhccCCCceEEEec
Confidence            9999996532  234556677788888888999998876544 44444

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=97.94  E-value=4.9e-05  Score=55.39  Aligned_cols=118  Identities=14%  Similarity=0.063  Sum_probs=69.9

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC-EEEEEecCCCCcchhhhhhhhhcC-CCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFP-EPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~  148 (248)
                      ++|.|.|+ |.+|..++..|+.++. +++++|......+.....+..... ..........  ++.   ++.++  +.|+
T Consensus         8 ~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~--~~~---~~~~~--~adi   79 (154)
T d1pzga1           8 KKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAE--YSY---EAALT--GADC   79 (154)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEE--CSH---HHHHT--TCSE
T ss_pred             CcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccCCeeEEecc--Cch---hhhhc--CCCe
Confidence            78888997 9999999998888884 898888544322222111211100 0111111111  122   22333  5799


Q ss_pred             EEEcccccccCC---CCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEecc
Q 025786          149 VMHFAAVAYVGE---STLDPLKYYHNITSNTLVVLESMARHGVDTLIYSST  196 (248)
Q Consensus       149 li~~Ag~~~~~~---~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS  196 (248)
                      ||-.||......   ...+-.+.+..|......+++.+.+.++..++.+-|
T Consensus        80 Vvitag~~~~~g~~~~~~tR~~l~~~n~~iv~~i~~~i~~~~p~aiviivs  130 (154)
T d1pzga1          80 VIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIVVT  130 (154)
T ss_dssp             EEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             EEEecccccCCCCCCcccchhhhhhhhHHHHHHHHHHHHhcCCCcEEEEeC
Confidence            999999754321   112445667778888888999998887655555444

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.92  E-value=1.1e-05  Score=59.96  Aligned_cols=74  Identities=16%  Similarity=0.240  Sum_probs=49.6

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHH---HHhhcCCCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVN---KFFSENAFD  147 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~---~~~~~~~iD  147 (248)
                      .+|||+||+|++|...++.+...|++|+++++++.    ..+..+++.   .. .+  .|.++.+-.+   +.....++|
T Consensus        30 ~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~----~~~~~~~~G---a~-~v--i~~~~~~~~~~i~~~t~~~g~d   99 (174)
T d1yb5a2          30 ESVLVHGASGGVGLAACQIARAYGLKILGTAGTEE----GQKIVLQNG---AH-EV--FNHREVNYIDKIKKYVGEKGID   99 (174)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHH----HHHHHHHTT---CS-EE--EETTSTTHHHHHHHHHCTTCEE
T ss_pred             CEEEEEeccccccccccccccccCccccccccccc----ccccccccC---cc-cc--cccccccHHHHhhhhhccCCce
Confidence            79999999999999999999999999999875322    223334432   11 22  2554443333   333335699


Q ss_pred             EEEEccc
Q 025786          148 AVMHFAA  154 (248)
Q Consensus       148 ~li~~Ag  154 (248)
                      +++.+.|
T Consensus       100 ~v~d~~g  106 (174)
T d1yb5a2         100 IIIEMLA  106 (174)
T ss_dssp             EEEESCH
T ss_pred             EEeeccc
Confidence            9999876

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=97.87  E-value=9e-05  Score=53.14  Aligned_cols=112  Identities=16%  Similarity=0.131  Sum_probs=71.9

Q ss_pred             EEEEecCCchhHHHHHHHHHHCCC--EEEEEecCCCCcchhhh---hhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCC
Q 025786           72 HVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVK---VLQELFPEPGRLQFIYADLGDAKAVNKFFSENAF  146 (248)
Q Consensus        72 ~vlITGasg~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~---~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~i  146 (248)
                      +|.|+||+|.+|..++..|+.+|.  +++++|.... .+.+..   .+...............|   ++++    +  +.
T Consensus         2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~-~~~~~g~a~Dl~~~~~~~~~~~i~~~~---~~~~----~--~a   71 (142)
T d1o6za1           2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDK-EDDTVGQAADTNHGIAYDSNTRVRQGG---YEDT----A--GS   71 (142)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGG-HHHHHHHHHHHHHHHTTTCCCEEEECC---GGGG----T--TC
T ss_pred             eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCc-ccccceeecchhhcccccCCceEeeCC---HHHh----h--hc
Confidence            689999999999999999999985  7888874211 111111   122111223334443333   3332    2  67


Q ss_pred             CEEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCE-EEEec
Q 025786          147 DAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDT-LIYSS  195 (248)
Q Consensus       147 D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~-iV~~S  195 (248)
                      |+||-.||...  ....+-.+.+..|......+.+.+.+..++. ++.+|
T Consensus        72 DiVvitaG~~~--~~g~~R~dl~~~N~~I~~~i~~~i~~~~p~~i~ivvt  119 (142)
T d1o6za1          72 DVVVITAGIPR--QPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTS  119 (142)
T ss_dssp             SEEEECCCCCC--CTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECC
T ss_pred             CEEEEeccccc--ccCCchhhHHHHHHHHHHHHHHHHHhcCCCceEEEec
Confidence            99999999642  2234566778888888888999998877554 44444

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.85  E-value=7.1e-05  Score=53.60  Aligned_cols=114  Identities=18%  Similarity=0.170  Sum_probs=69.6

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCC--CEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDS--YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~  148 (248)
                      ++|.|.|+ |.+|..++..|+.++  .+++++|......+.....+...............   +++++    +  +.|+
T Consensus         1 mKI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~---~~~~~----~--~adi   70 (140)
T d1a5za1           1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAG---DYADL----K--GSDV   70 (140)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEEC---CGGGG----T--TCSE
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCC---cHHHh----c--CCCE
Confidence            45777786 999999999998887  48999886432222111111111111223333333   33333    2  5799


Q ss_pred             EEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEecc
Q 025786          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSST  196 (248)
Q Consensus       149 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS  196 (248)
                      +|-.||....  ......+.+..|......+.+.+.+..+..++.+-|
T Consensus        71 vvitag~~~~--~g~~r~dl~~~N~~I~~~i~~~i~~~~p~aivivvt  116 (140)
T d1a5za1          71 VIVAAGVPQK--PGETRLQLLGRNARVMKEIARNVSKYAPDSIVIVVT  116 (140)
T ss_dssp             EEECCCCCCC--SSCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             EEEecccccC--CCcchhhhhccccchHHHHHHHHHhcCCCcEEEEeC
Confidence            9999996432  233455667778877888999998877655555444

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=97.83  E-value=5.6e-05  Score=54.29  Aligned_cols=115  Identities=15%  Similarity=0.149  Sum_probs=69.2

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCC--CEEEEEecCCCCcchhhhhhhhhc-CCCCceEEEEccCCCHHHHHHHhhcCCCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDS--YRVTIVDNLSRGNIGAVKVLQELF-PEPGRLQFIYADLGDAKAVNKFFSENAFD  147 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G--~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD  147 (248)
                      |+|.|+|+ |.+|..++..|+.+|  .+++++|......+.....+.... .......+...  .+++++    +  +.|
T Consensus         1 mKI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~--~~~~~~----~--dad   71 (142)
T d1guza1           1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGS--NDYADT----A--NSD   71 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEE--SCGGGG----T--TCS
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEec--CCHHHh----c--CCe
Confidence            35778896 999999999999998  489999865433221111111110 00122333322  233332    2  579


Q ss_pred             EEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEecc
Q 025786          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSST  196 (248)
Q Consensus       148 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS  196 (248)
                      ++|..||...  .......+....|......+.+.+.+..+..++.+-|
T Consensus        72 vvvitag~~~--~~g~~r~~l~~~N~~i~~~i~~~i~~~~p~aivivvt  118 (142)
T d1guza1          72 IVIITAGLPR--KPGMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVVS  118 (142)
T ss_dssp             EEEECCSCCC--CTTCCHHHHHHHHHHHHHHHHHHHHHHCSSCEEEECC
T ss_pred             EEEEEEecCC--CCCCchHHHHHHHHHHHHHHHHHhhccCCCeEEEEec
Confidence            9999998643  2223455667777777888888888876554444433

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.82  E-value=1.8e-05  Score=59.14  Aligned_cols=74  Identities=23%  Similarity=0.234  Sum_probs=46.8

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCH-HHHHHHhhcCCCCEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDA-KAVNKFFSENAFDAV  149 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~iD~l  149 (248)
                      .+|||+||+||+|...++-....|++|+.+.+++.+.    +..+++.   .... +  |-.+. ++..+.....++|++
T Consensus        33 ~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~----~~~~~lG---a~~v-i--~~~~~~~~~~~~~~~~gvD~v  102 (176)
T d1xa0a2          33 GPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEH----DYLRVLG---AKEV-L--AREDVMAERIRPLDKQRWAAA  102 (176)
T ss_dssp             CCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCH----HHHHHTT---CSEE-E--ECC---------CCSCCEEEE
T ss_pred             CEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHH----HHHHhcc---ccee-e--ecchhHHHHHHHhhccCcCEE
Confidence            8999999999999999998889999999988654432    2333332   2222 2  22211 222222333579999


Q ss_pred             EEccc
Q 025786          150 MHFAA  154 (248)
Q Consensus       150 i~~Ag  154 (248)
                      |++.|
T Consensus       103 id~vg  107 (176)
T d1xa0a2         103 VDPVG  107 (176)
T ss_dssp             EECST
T ss_pred             EEcCC
Confidence            99987

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.78  E-value=1.7e-05  Score=59.29  Aligned_cols=74  Identities=16%  Similarity=0.134  Sum_probs=49.1

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCH---HHHHHHhhcCCCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDA---KAVNKFFSENAFD  147 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~---~~~~~~~~~~~iD  147 (248)
                      .+|||+||+|++|...+..+...|++|+++++++.   + .+.+++.   +.. .+  .|-.++   +.+.+.....++|
T Consensus        27 ~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~---~-~~~l~~~---Ga~-~v--i~~~~~~~~~~v~~~t~~~g~d   96 (183)
T d1pqwa_          27 ERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDA---K-REMLSRL---GVE-YV--GDSRSVDFADEILELTDGYGVD   96 (183)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHH---H-HHHHHTT---CCS-EE--EETTCSTHHHHHHHHTTTCCEE
T ss_pred             CEEEEECCCCCcccccchhhccccccceeeecccc---c-ccccccc---ccc-cc--ccCCccCHHHHHHHHhCCCCEE
Confidence            79999999999999999988889999999875322   1 2333333   222 22  233333   3333333335799


Q ss_pred             EEEEccc
Q 025786          148 AVMHFAA  154 (248)
Q Consensus       148 ~li~~Ag  154 (248)
                      ++|.+.|
T Consensus        97 ~v~d~~g  103 (183)
T d1pqwa_          97 VVLNSLA  103 (183)
T ss_dssp             EEEECCC
T ss_pred             EEEeccc
Confidence            9999886

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=97.78  E-value=2.1e-05  Score=58.68  Aligned_cols=74  Identities=9%  Similarity=0.025  Sum_probs=50.1

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHH---HHHHHhhcCCCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAK---AVNKFFSENAFD  147 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~---~~~~~~~~~~iD  147 (248)
                      ++|+|+||+|++|...++-....|++|+++++++.+    .+..+++.   .. .+  .|-++++   .+.++.....+|
T Consensus        30 ~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k----~~~~~~lG---a~-~v--i~~~~~d~~~~v~~~t~g~g~d   99 (179)
T d1qora2          30 EQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQK----AQSALKAG---AW-QV--INYREEDLVERLKEITGGKKVR   99 (179)
T ss_dssp             CEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHH----HHHHHHHT---CS-EE--EETTTSCHHHHHHHHTTTCCEE
T ss_pred             CEEEEEccccccchHHHHHHHHhCCeEeecccchHH----HHHHHhcC---Ce-EE--EECCCCCHHHHHHHHhCCCCeE
Confidence            799999999999999999999999999999864332    23334442   12 22  3444433   333333335689


Q ss_pred             EEEEccc
Q 025786          148 AVMHFAA  154 (248)
Q Consensus       148 ~li~~Ag  154 (248)
                      +++.+.|
T Consensus       100 ~v~d~~g  106 (179)
T d1qora2         100 VVYDSVG  106 (179)
T ss_dssp             EEEECSC
T ss_pred             EEEeCcc
Confidence            9999886

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=97.76  E-value=0.00032  Score=51.19  Aligned_cols=114  Identities=18%  Similarity=0.160  Sum_probs=71.2

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC--EEEEEecCCCCcchhhhhhhhhcC-CCCceEEEEccCCCHHHHHHHhhcCCCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELFP-EPGRLQFIYADLGDAKAVNKFFSENAFD  147 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~iD  147 (248)
                      ++|-|.|+ |.+|..++..|+.+|.  +++++|+.....+.....+..... ..... .+..  .+++++.      +.|
T Consensus        21 ~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~-~~~~--~d~~~~~------~ad   90 (160)
T d1i0za1          21 NKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPK-IVAD--KDYSVTA------NSK   90 (160)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSE-EEEC--SSGGGGT------TCS
T ss_pred             CeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCe-EEec--cchhhcc------ccc
Confidence            68888895 9999999999999986  899988643222111111221111 11122 2221  2333332      579


Q ss_pred             EEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCC-EEEEecc
Q 025786          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD-TLIYSST  196 (248)
Q Consensus       148 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~-~iV~~SS  196 (248)
                      +||..||....  ...+..+.+..|......+.+.+.+.+.+ .+|.+|.
T Consensus        91 iVVitAg~~~~--~g~tR~~l~~~N~~i~~~i~~~i~~~~p~aiiivvtN  138 (160)
T d1i0za1          91 IVVVTAGVRQQ--EGESRLNLVQRNVNVFKFIIPQIVKYSPDCIIIVVSN  138 (160)
T ss_dssp             EEEECCSCCCC--TTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred             EEEEecCCccc--cCcchHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCC
Confidence            99999996432  23455677778888888899999887754 4555554

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=97.76  E-value=0.00015  Score=52.02  Aligned_cols=114  Identities=13%  Similarity=0.091  Sum_probs=69.5

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC--EEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~  148 (248)
                      .+|.|.|+ |.+|.+++..|+.+|.  +++++|......+.....++..............  .+++++    +  +.|+
T Consensus         2 ~Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~--~~~~~~----~--daDv   72 (143)
T d1llda1           2 TKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGS--DDPEIC----R--DADM   72 (143)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEE--SCGGGG----T--TCSE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCceeecC--CCHHHh----h--CCcE
Confidence            46788896 9999999999999985  8999885432221111112221111122233222  233322    2  5799


Q ss_pred             EEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEE-Eec
Q 025786          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI-YSS  195 (248)
Q Consensus       149 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV-~~S  195 (248)
                      ||-.||...  ....+..+.+..|......+.+.+.+.+...++ .+|
T Consensus        73 VVitaG~~~--~~g~~R~dl~~~N~~i~~~i~~~i~~~~p~ai~ivvt  118 (143)
T d1llda1          73 VVITAGPRQ--KPGQSRLELVGATVNILKAIMPNLVKVAPNAIYMLIT  118 (143)
T ss_dssp             EEECCCCCC--CTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECC
T ss_pred             EEEeccccc--CCCCchhhhhhhhHHHHHHHHHHHHhhCCCeEEEEeC
Confidence            999999643  223445567778888888888988888765444 444

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.75  E-value=3.9e-05  Score=56.90  Aligned_cols=72  Identities=18%  Similarity=0.135  Sum_probs=47.6

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li  150 (248)
                      ++|+|+||+|++|...+..+...|++|+++++++.+.    +..+++.   ....   .|..+  ...+.-...++|++|
T Consensus        29 ~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~----~~~~~lG---a~~~---i~~~~--~~~~~~~~~g~D~v~   96 (171)
T d1iz0a2          29 EKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKL----ALPLALG---AEEA---ATYAE--VPERAKAWGGLDLVL   96 (171)
T ss_dssp             CEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGS----HHHHHTT---CSEE---EEGGG--HHHHHHHTTSEEEEE
T ss_pred             CEEEEEeccccchhhhhhhhccccccccccccccccc----ccccccc---ccee---eehhh--hhhhhhccccccccc
Confidence            8999999999999999999889999999988644332    2233332   1111   23322  222332335799999


Q ss_pred             Eccc
Q 025786          151 HFAA  154 (248)
Q Consensus       151 ~~Ag  154 (248)
                      ++.|
T Consensus        97 d~~G  100 (171)
T d1iz0a2          97 EVRG  100 (171)
T ss_dssp             ECSC
T ss_pred             cccc
Confidence            9765

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=97.67  E-value=0.00016  Score=52.45  Aligned_cols=117  Identities=16%  Similarity=0.102  Sum_probs=67.5

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC----E-E--EEEecCCCCcchhhhhhhhhc-CCCCceEEEEccCCCHHHHHHHhh
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY----R-V--TIVDNLSRGNIGAVKVLQELF-PEPGRLQFIYADLGDAKAVNKFFS  142 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~----~-V--~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~  142 (248)
                      ++|.|+||+|.+|++++..|+..+.    . +  .+++ .....+.......++. ........+...-.++    +.++
T Consensus         5 ~KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~   79 (154)
T d1y7ta1           5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLE-IPQAMKALEGVVMELEDCAFPLLAGLEATDDPK----VAFK   79 (154)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEEC-CGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHH----HHTT
T ss_pred             CEEEEECCCCHHHHHHHHHHHhccccccccchhHhHhc-cccchhhHcCchhhhhccccccccccccCCchh----hhcc
Confidence            6899999999999999999988753    1 1  2222 1111112221111111 1112233333322223    3333


Q ss_pred             cCCCCEEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcC-C-CEEEEecc
Q 025786          143 ENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHG-V-DTLIYSST  196 (248)
Q Consensus       143 ~~~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~-~-~~iV~~SS  196 (248)
                        +.|++|-.||...  ....+..+.+..|......+.+.+.+.. . ..|+.+|.
T Consensus        80 --~advViitaG~~~--~pg~~r~dl~~~N~~i~~~~~~~i~k~a~~~~~vivvsN  131 (154)
T d1y7ta1          80 --DADYALLVGAAPR--KAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGN  131 (154)
T ss_dssp             --TCSEEEECCCCCC--CTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred             --cccEEEeecCcCC--CCCCcHHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEecC
Confidence              6799999999753  2334566777888888888999988853 3 34555553

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.65  E-value=3e-05  Score=49.54  Aligned_cols=34  Identities=35%  Similarity=0.467  Sum_probs=30.7

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~  104 (248)
                      ++++|+||+|++|...+..+...|++|+++.+++
T Consensus        33 ~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~   66 (77)
T d1o8ca2          33 GEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRE   66 (77)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCG
T ss_pred             CcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCH
Confidence            7899999999999999998889999999887544

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=97.65  E-value=0.00045  Score=51.16  Aligned_cols=116  Identities=14%  Similarity=0.104  Sum_probs=67.2

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCC---C----EEEEEecCCCCcchhhhhhhhhcCC-CCceEEEEccCCCHHHHHHHhh
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDS---Y----RVTIVDNLSRGNIGAVKVLQELFPE-PGRLQFIYADLGDAKAVNKFFS  142 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G---~----~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~  142 (248)
                      .+|.||||+|.||.+++..|+...   .    .+.+++.. .....+....-++... ......+..- ++   ..+.++
T Consensus        25 ~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~-~~~~~l~g~~mdl~d~a~~~~~~~~~~-~~---~~~~~~   99 (175)
T d7mdha1          25 VNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSE-RSFQALEGVAMELEDSLYPLLREVSIG-ID---PYEVFE   99 (175)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCG-GGHHHHHHHHHHHHTTTCTTEEEEEEE-SC---HHHHTT
T ss_pred             cEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCc-cccchhcchhhhhcccccccccCcccc-cc---chhhcc
Confidence            589999999999999999998753   1    34444421 1111122211111111 1112111111 12   223343


Q ss_pred             cCCCCEEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCC-C-EEEEec
Q 025786          143 ENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV-D-TLIYSS  195 (248)
Q Consensus       143 ~~~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~-~-~iV~~S  195 (248)
                        +.|++|-.||..  .....+..+.+..|......+.+.+.+... . +|+.+|
T Consensus       100 --~aDvVvi~ag~~--rkpg~tR~Dll~~N~~I~k~~~~~i~~~a~~~~~vlvv~  150 (175)
T d7mdha1         100 --DVDWALLIGAKP--RGPGMERAALLDINGQIFADQGKALNAVASKNVKVLVVG  150 (175)
T ss_dssp             --TCSEEEECCCCC--CCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             --CCceEEEeeccC--CCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCcEEEEec
Confidence              689999999864  234456677888888888889999988533 3 455554

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=97.64  E-value=0.00014  Score=52.39  Aligned_cols=116  Identities=14%  Similarity=0.118  Sum_probs=68.0

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC--EEEEEecCCCCcchhhhhhhhhcC-CCCceEEEEccCCCHHHHHHHhhcCCCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELFP-EPGRLQFIYADLGDAKAVNKFFSENAFD  147 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~iD  147 (248)
                      |+|.|.| +|.+|..++..|+.+|.  +++++|......+.....+.+... ..........   |+++++      +.|
T Consensus         2 kKI~IIG-aG~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~---d~~~l~------~ad   71 (146)
T d1hyha1           2 RKIGIIG-LGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVIN---DWAALA------DAD   71 (146)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEES---CGGGGT------TCS
T ss_pred             CeEEEEC-cCHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceecc---CHHHhc------ccc
Confidence            6788999 59999999999999883  899888643322211111222111 1222333333   343332      579


Q ss_pred             EEEEcccccccCC--CCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEecc
Q 025786          148 AVMHFAAVAYVGE--STLDPLKYYHNITSNTLVVLESMARHGVDTLIYSST  196 (248)
Q Consensus       148 ~li~~Ag~~~~~~--~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS  196 (248)
                      +||-.||......  ...+-.+.+..|......+.+.+.+..+..++.+-|
T Consensus        72 iVVitaG~~~~~~~~~g~~R~~l~~~N~~i~~~i~~~i~~~~p~aivivvt  122 (146)
T d1hyha1          72 VVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGFHGVLVVIS  122 (146)
T ss_dssp             EEEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             EEEEeccccccccccCCccHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEec
Confidence            9999999653221  112234456677777888888888876554544444

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=97.59  E-value=3.7e-05  Score=54.45  Aligned_cols=71  Identities=15%  Similarity=0.113  Sum_probs=49.7

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li  150 (248)
                      |+++|.|. |-+|+++++.|.++|++|++++.++.   .    .+++..  .....+.+|.++++.+.++-- .+.|.+|
T Consensus         1 k~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~---~----~~~~~~--~~~~~~~gd~~~~~~l~~a~i-~~a~~vi   69 (134)
T d2hmva1           1 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEE---K----VNAYAS--YATHAVIANATEENELLSLGI-RNFEYVI   69 (134)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHH---H----HHHTTT--TCSEEEECCTTCTTHHHHHTG-GGCSEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHH---H----HHHHHH--hCCcceeeecccchhhhccCC-ccccEEE
Confidence            46778875 89999999999999999999984321   1    122221  234567799999988877622 2568776


Q ss_pred             Ec
Q 025786          151 HF  152 (248)
Q Consensus       151 ~~  152 (248)
                      -.
T Consensus        70 ~~   71 (134)
T d2hmva1          70 VA   71 (134)
T ss_dssp             EC
T ss_pred             EE
Confidence            43

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.58  E-value=0.00023  Score=51.94  Aligned_cols=114  Identities=16%  Similarity=0.122  Sum_probs=68.8

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC--EEEEEecCCCCcchhhhhhhhhcCC-CCceEEEEccCCCHHHHHHHhhcCCCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELFPE-PGRLQFIYADLGDAKAVNKFFSENAFD  147 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~iD  147 (248)
                      .+|.|.|+ |.+|..++..|+.+|.  +++++|+.....+.....+...... +........   |++++.      +.|
T Consensus        20 ~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~---d~~~~~------~ad   89 (159)
T d2ldxa1          20 CKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGK---DYNVSA------NSK   89 (159)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEES---SGGGGT------TEE
T ss_pred             CeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEecc---chhhhc------ccc
Confidence            56888885 9999999999999985  8999885432221111122221111 112222222   333221      579


Q ss_pred             EEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCC-EEEEecc
Q 025786          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD-TLIYSST  196 (248)
Q Consensus       148 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~-~iV~~SS  196 (248)
                      ++|..||.....  ..+..+.+..|......+.+.+.+.+.. .++.+|.
T Consensus        90 ivvitag~~~~~--~~~R~dll~~N~~i~~~i~~~i~~~~p~~ivivvtN  137 (159)
T d2ldxa1          90 LVIITAGARMVS--GQTRLDLLQRNVAIMKAIVPGVIQNSPDCKIIVVTN  137 (159)
T ss_dssp             EEEECCSCCCCT--TTCSSCTTHHHHHHHHHHTTTHHHHSTTCEEEECSS
T ss_pred             EEEEecccccCC--CCCHHHHHHHHHHHHHHHHHHHhccCCCeEEEEeCC
Confidence            999999865322  2344456777877788888888877654 4555554

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=97.57  E-value=7e-05  Score=55.40  Aligned_cols=72  Identities=19%  Similarity=0.302  Sum_probs=46.8

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li  150 (248)
                      |+|+|.|+ ||.+++++..|.+.|.+|+++.|+..+.+.+.+.....    ..+..+  +..+.       ...+.|+||
T Consensus        19 k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~----~~~~~~--~~~~~-------~~~~~dliI   84 (170)
T d1nyta1          19 LRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHT----GSIQAL--SMDEL-------EGHEFDLII   84 (170)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGG----SSEEEC--CSGGG-------TTCCCSEEE
T ss_pred             CEEEEECC-cHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhc----cccccc--ccccc-------cccccceee
Confidence            89999995 99999999999999999999887544433333222211    123322  22111       113689999


Q ss_pred             Eccccc
Q 025786          151 HFAAVA  156 (248)
Q Consensus       151 ~~Ag~~  156 (248)
                      |+..+.
T Consensus        85 N~Tp~G   90 (170)
T d1nyta1          85 NATSSG   90 (170)
T ss_dssp             ECCSCG
T ss_pred             cccccC
Confidence            997654

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.56  E-value=0.00024  Score=50.88  Aligned_cols=115  Identities=15%  Similarity=0.151  Sum_probs=68.7

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC--EEEEEecCCCCcchhhhhhhhhc-CCCCceEEEEccCCCHHHHHHHhhcCCCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELF-PEPGRLQFIYADLGDAKAVNKFFSENAFD  147 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD  147 (248)
                      |+|.|.|+ |.+|..++..|+.+|.  +++++|......+.....+.... ..+........  .|++++    +  +.|
T Consensus         1 MKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~--~d~~~~----~--~ad   71 (142)
T d1ojua1           1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--ADYSLL----K--GSE   71 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEE--SCGGGG----T--TCS
T ss_pred             CEEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccC--CCHHHh----c--ccc
Confidence            45777785 9999999999998884  79998854322211111121111 11122222222  123322    2  579


Q ss_pred             EEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEecc
Q 025786          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSST  196 (248)
Q Consensus       148 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS  196 (248)
                      ++|-.||...  ....+..+.+..|......+.+.+.+.++..++.+-|
T Consensus        72 iVvitag~~~--~~g~~r~~l~~~n~~i~~~i~~~i~~~~p~aivivvt  118 (142)
T d1ojua1          72 IIVVTAGLAR--KPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVT  118 (142)
T ss_dssp             EEEECCCCCC--CSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECS
T ss_pred             EEEEeccccC--CCCCchHHHHHHhhHHHHHHHHHHHhhCCCcEEEEec
Confidence            9999998643  2233556677788878888999998876555555444

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.50  E-value=0.00051  Score=49.73  Aligned_cols=116  Identities=16%  Similarity=0.063  Sum_probs=64.8

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC-------EEEEEecCCCCcchhhhhhhhhc-CCCCceEEEEccCCCHHHHHHHhh
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY-------RVTIVDNLSRGNIGAVKVLQELF-PEPGRLQFIYADLGDAKAVNKFFS  142 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~-------~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~  142 (248)
                      ++|.|+||+|.+|++++..|+..+-       .+++.+.. +....+.....++. ........+..--.++    +.++
T Consensus         4 ~KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~----~~~~   78 (154)
T d5mdha1           4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDIT-PMMGVLDGVLMELQDCALPLLKDVIATDKEE----IAFK   78 (154)
T ss_dssp             EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCG-GGHHHHHHHHHHHHHTCCTTEEEEEEESCHH----HHTT
T ss_pred             eEEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCc-cchhhhhhhhhhhcccccccccccccCcccc----cccC
Confidence            6899999999999999999986542       34444421 11111221111110 1111222222111122    3333


Q ss_pred             cCCCCEEEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHc-CCC-EEEEec
Q 025786          143 ENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARH-GVD-TLIYSS  195 (248)
Q Consensus       143 ~~~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~-~~~-~iV~~S  195 (248)
                        +.|++|-.||....  ...+..+.+..|......+.+.+.+. +.. .++.+|
T Consensus        79 --~~dvVVitag~~~~--~g~sr~dll~~N~~i~k~~~~~i~k~a~~~~~iivvs  129 (154)
T d5mdha1          79 --DLDVAILVGSMPRR--DGMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVG  129 (154)
T ss_dssp             --TCSEEEECCSCCCC--TTCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             --CceEEEEecccCCC--CCCchhHHHHHhHHHHHHHHHHHHhhCCCceEEEEec
Confidence              67999999986532  23344566788888888888888775 333 344454

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=97.48  E-value=0.00021  Score=52.43  Aligned_cols=76  Identities=18%  Similarity=0.172  Sum_probs=49.7

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEcc--CCCHHHHHHHhhc---CC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYAD--LGDAKAVNKFFSE---NA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D--l~~~~~~~~~~~~---~~  145 (248)
                      .+|+|+| +|+||...+..+...|++|+++++++.+    .+..+++.   ....+ ..|  -.+.+++.+.+++   .+
T Consensus        28 ~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r----~~~a~~~g---a~~~~-~~~~~~~~~~~~~~~~~~~~g~g   98 (170)
T d1e3ja2          28 TTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRR----LEVAKNCG---ADVTL-VVDPAKEEESSIIERIRSAIGDL   98 (170)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHH----HHHHHHTT---CSEEE-ECCTTTSCHHHHHHHHHHHSSSC
T ss_pred             CEEEEEc-ccccchhhHhhHhhhcccccccchHHHH----HHHHHHcC---CcEEE-eccccccccchhhhhhhcccccC
Confidence            7899997 7999999999999999999999854322    22233332   22222 222  2344455454443   46


Q ss_pred             CCEEEEcccc
Q 025786          146 FDAVMHFAAV  155 (248)
Q Consensus       146 iD~li~~Ag~  155 (248)
                      +|++|.++|.
T Consensus        99 ~D~vid~~g~  108 (170)
T d1e3ja2          99 PNVTIDCSGN  108 (170)
T ss_dssp             CSEEEECSCC
T ss_pred             CceeeecCCC
Confidence            9999999874

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=97.47  E-value=0.00029  Score=54.36  Aligned_cols=74  Identities=20%  Similarity=0.225  Sum_probs=51.1

Q ss_pred             eEEEEecC----------------CchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCH
Q 025786           71 THVLVTGG----------------AGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDA  134 (248)
Q Consensus        71 k~vlITGa----------------sg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~  134 (248)
                      ++||||+|                ||-.|.+||+++..+|++|+++.-....            ..+..+..+.  +.+.
T Consensus         7 ~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~------------~~p~~~~~~~--~~t~   72 (223)
T d1u7za_           7 LNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSL------------PTPPFVKRVD--VMTA   72 (223)
T ss_dssp             CEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCC------------CCCTTEEEEE--CCSH
T ss_pred             CEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhccccc------------Ccccccccce--ehhh
Confidence            78888876                7999999999999999999988632110            1123444443  3455


Q ss_pred             HHHHHHhhc--CCCCEEEEccccccc
Q 025786          135 KAVNKFFSE--NAFDAVMHFAAVAYV  158 (248)
Q Consensus       135 ~~~~~~~~~--~~iD~li~~Ag~~~~  158 (248)
                      ++....+.+  ...|++|++|++...
T Consensus        73 ~~m~~~~~~~~~~~D~~i~aAAvsDf   98 (223)
T d1u7za_          73 LEMEAAVNASVQQQNIFIGCAAVADY   98 (223)
T ss_dssp             HHHHHHHHHHGGGCSEEEECCBCCSE
T ss_pred             HHHHHHHHhhhccceeEeeeechhhh
Confidence            555444432  368999999998654

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=97.45  E-value=0.0009  Score=47.93  Aligned_cols=32  Identities=22%  Similarity=0.344  Sum_probs=25.9

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCC----CEEEEEe
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDS----YRVTIVD  101 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G----~~V~~~~  101 (248)
                      ||+|.|.||||.+|+.+++.|+++.    .+++...
T Consensus         1 MkkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~   36 (146)
T d1t4ba1           1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFS   36 (146)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEE
T ss_pred             CcEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEee
Confidence            6899999999999999999888763    2555554

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=97.44  E-value=0.00041  Score=49.92  Aligned_cols=37  Identities=24%  Similarity=0.483  Sum_probs=33.5

Q ss_pred             CCceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCC
Q 025786           68 EGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (248)
Q Consensus        68 ~~~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~  104 (248)
                      ..|++|.|.||.|.+|..+++.|.++||+|.+.++..
T Consensus         7 ~~~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~   43 (152)
T d2pv7a2           7 SDIHKIVIVGGYGKLGGLFARYLRASGYPISILDRED   43 (152)
T ss_dssp             TTCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTC
T ss_pred             CCCCeEEEEcCCCHHHHHHHHHHHHcCCCcEeccccc
Confidence            3468999999999999999999999999999998754

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=97.39  E-value=0.00054  Score=49.38  Aligned_cols=117  Identities=12%  Similarity=0.092  Sum_probs=68.4

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC-EEEEEecCCCCcchhhhhhhhhcC-CCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFP-EPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~  148 (248)
                      .+|-|.|+ |.+|..++..|..++. +++++|+.....+.....+..... ...+..+...|  +++++.      +.|+
T Consensus         4 ~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~--~~~~~~------~adv   74 (150)
T d1t2da1           4 AKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSN--TYDDLA------GADV   74 (150)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEEC--CGGGGT------TCSE
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEecc--cccccC------CCcE
Confidence            56888895 9999999988888774 888888644322221111111100 01122222222  233322      5799


Q ss_pred             EEEcccccccCC-C--CCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEecc
Q 025786          149 VMHFAAVAYVGE-S--TLDPLKYYHNITSNTLVVLESMARHGVDTLIYSST  196 (248)
Q Consensus       149 li~~Ag~~~~~~-~--~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS  196 (248)
                      +|-.||...... .  ...-.+.+..|......+.+.+++..+..++.+-|
T Consensus        75 vvitag~~~~~g~~~~~~~R~~l~~~N~~iv~~i~~~i~~~~p~aivivvt  125 (150)
T d1t2da1          75 VIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIVVT  125 (150)
T ss_dssp             EEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred             EEEecccccCCCCCccccchhHHHHHHHHHHHHHHHHHHhcCCCeEEEEec
Confidence            999999753221 1  12345567777777888899898877655544433

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.37  E-value=9.1e-05  Score=54.21  Aligned_cols=69  Identities=22%  Similarity=0.227  Sum_probs=48.2

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC-EEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~l  149 (248)
                      ++|+|.|+ |.+|..+++.|...|+ +|+++.|+.   +.+.+..+++.     ...     .+.+++.+.+.  ..|+|
T Consensus        25 ~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~---~ka~~l~~~~~-----~~~-----~~~~~~~~~l~--~~Div   88 (159)
T d1gpja2          25 KTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTY---ERAVELARDLG-----GEA-----VRFDELVDHLA--RSDVV   88 (159)
T ss_dssp             CEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSH---HHHHHHHHHHT-----CEE-----CCGGGHHHHHH--TCSEE
T ss_pred             CeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcH---HHHHHHHHhhh-----ccc-----ccchhHHHHhc--cCCEE
Confidence            89999997 9999999999999998 587877543   33333333331     122     23356666666  68999


Q ss_pred             EEcccc
Q 025786          150 MHFAAV  155 (248)
Q Consensus       150 i~~Ag~  155 (248)
                      |++.+.
T Consensus        89 i~atss   94 (159)
T d1gpja2          89 VSATAA   94 (159)
T ss_dssp             EECCSS
T ss_pred             EEecCC
Confidence            998763

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=97.37  E-value=0.00035  Score=50.77  Aligned_cols=36  Identities=19%  Similarity=0.117  Sum_probs=31.7

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCc
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGN  107 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~  107 (248)
                      |+|.|.|+ |.||..++..|++.|++|.+++|.....
T Consensus         1 MkI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~~   36 (167)
T d1ks9a2           1 MKITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQPY   36 (167)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSE
T ss_pred             CEEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHHh
Confidence            57889987 9999999999999999999999865543

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=97.36  E-value=0.0012  Score=46.99  Aligned_cols=115  Identities=13%  Similarity=0.111  Sum_probs=64.5

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC-EEEEEecCCCCcchhhhhhhhhc-CCCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELF-PEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~  148 (248)
                      ++|-|.|+ |.+|..++..|+.++. +++++|......+.....+.... ..+....+...  .|++++.      +.|+
T Consensus         2 ~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~--~d~~~~~------~adv   72 (142)
T d1uxja1           2 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGT--NNYADTA------NSDV   72 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE--SCGGGGT------TCSE
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccccCCCCEEEec--CcHHHhc------CCCE
Confidence            67888895 9999999999988874 88888854332221111111100 00112222211  2333322      5799


Q ss_pred             EEEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEecc
Q 025786          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSST  196 (248)
Q Consensus       149 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS  196 (248)
                      +|-+||....  ...+..+.+..|......+.+.+.+..+..++.+.|
T Consensus        73 vvitag~~~~--~~~~r~dl~~~N~~i~~~i~~~i~k~~p~aivivvt  118 (142)
T d1uxja1          73 IVVTSGAPRK--PGMSREDLIKVNADITRACISQAAPLSPNAVIIMVN  118 (142)
T ss_dssp             EEECCSCC-----------CHHHHHHHHHHHHHHHGGGCTTCEEEECS
T ss_pred             EEEeeeccCC--cCcchhHHHhHHHHHHHHHHHHHhccCCCceEEEeC
Confidence            9999996532  223344566777777888999998877655555444

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.34  E-value=0.00029  Score=52.74  Aligned_cols=77  Identities=14%  Similarity=0.028  Sum_probs=44.9

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHH-HHHHHhhcCCCCEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAK-AVNKFFSENAFDAV  149 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~iD~l  149 (248)
                      ++|||+||+|++|...++-....|+++++...  .+.+...+..+++.   .. .++...-.+.. .+++.. ..++|++
T Consensus        32 etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~--~~~e~~~~l~~~~g---ad-~vi~~~~~~~~~~~~~~~-~~GvDvv  104 (187)
T d1vj1a2          32 QTMVVSGAAGACGSLAGQIGHLLGCSRVVGIC--GTQEKCLFLTSELG---FD-AAVNYKTGNVAEQLREAC-PGGVDVY  104 (187)
T ss_dssp             CEEEESSTTSTTGGGHHHHHHHTTCSEEEEEE--SSHHHHHHHHHHSC---CS-EEEETTSSCHHHHHHHHC-TTCEEEE
T ss_pred             CEEEEECCCchhhHHHHHHHHHcCCcceeccc--chHHHHhhhhhccc---ce-EEeeccchhHHHHHHHHh-ccCceEE
Confidence            78999999999999999888889987554321  22222222222331   12 22222222222 233333 2469999


Q ss_pred             EEccc
Q 025786          150 MHFAA  154 (248)
Q Consensus       150 i~~Ag  154 (248)
                      +.+.|
T Consensus       105 ~D~vG  109 (187)
T d1vj1a2         105 FDNVG  109 (187)
T ss_dssp             EESSC
T ss_pred             EecCC
Confidence            99876

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=97.34  E-value=0.00022  Score=53.06  Aligned_cols=76  Identities=13%  Similarity=0.156  Sum_probs=47.0

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC-EEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHH----HhhcCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNK----FFSENA  145 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~----~~~~~~  145 (248)
                      .+|+|+|+ |+||...+..+...|+ +|+++++++.+    .+..+++.   ... ++...=.+..+..+    .....+
T Consensus        30 ~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~----~~~a~~lG---a~~-vi~~~~~~~~~~~~~i~~~~~~~g  100 (182)
T d1vj0a2          30 KTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNR----LKLAEEIG---ADL-TLNRRETSVEERRKAIMDITHGRG  100 (182)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHH----HHHHHHTT---CSE-EEETTTSCHHHHHHHHHHHTTTSC
T ss_pred             CEEEEECC-Cccchhheeccccccccccccccccccc----cccccccc---ceE-EEeccccchHHHHHHHHHhhCCCC
Confidence            89999986 8999999999999998 79998854322    23333432   122 22221123323222    222246


Q ss_pred             CCEEEEcccc
Q 025786          146 FDAVMHFAAV  155 (248)
Q Consensus       146 iD~li~~Ag~  155 (248)
                      +|++|.+.|.
T Consensus       101 ~Dvvid~vG~  110 (182)
T d1vj0a2         101 ADFILEATGD  110 (182)
T ss_dssp             EEEEEECSSC
T ss_pred             ceEEeecCCc
Confidence            9999999874

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=97.27  E-value=0.00016  Score=54.26  Aligned_cols=80  Identities=13%  Similarity=0.090  Sum_probs=49.6

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEc---cCCCH-HHHHHHhhc--C
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYA---DLGDA-KAVNKFFSE--N  144 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---Dl~~~-~~~~~~~~~--~  144 (248)
                      ..++++||+|++|...++-....|++|+++.+.....++..+.++++..   .. ++.-   |..+. +.+.++.+.  .
T Consensus        31 ~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~lGa---d~-vi~~~~~~~~~~~~~v~~~~~~~g~  106 (189)
T d1gu7a2          31 DWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGA---TQ-VITEDQNNSREFGPTIKEWIKQSGG  106 (189)
T ss_dssp             CEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTC---SE-EEEHHHHHCGGGHHHHHHHHHHHTC
T ss_pred             EEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhhccc---cE-EEeccccchhHHHHHHHHHHhhccC
Confidence            3455589999999999988888899999988655554444455555532   22 2222   21111 123333322  4


Q ss_pred             CCCEEEEccc
Q 025786          145 AFDAVMHFAA  154 (248)
Q Consensus       145 ~iD~li~~Ag  154 (248)
                      ++|+++++.|
T Consensus       107 ~vdvv~D~vg  116 (189)
T d1gu7a2         107 EAKLALNCVG  116 (189)
T ss_dssp             CEEEEEESSC
T ss_pred             CceEEEECCC
Confidence            6999999876

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=97.26  E-value=0.00031  Score=51.52  Aligned_cols=75  Identities=20%  Similarity=0.178  Sum_probs=47.9

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC-EEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhh---cCCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFS---ENAF  146 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---~~~i  146 (248)
                      .+|+|.|++|++|..++..+...|+ +|++++++..    ..+..+++.   .. ..+  |.++.+..++..+   ...+
T Consensus        29 ~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~----~~~~~~~~G---a~-~~i--~~~~~~~~~~~~~~~~~~~~   98 (170)
T d1jvba2          29 KTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREE----AVEAAKRAG---AD-YVI--NASMQDPLAEIRRITESKGV   98 (170)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHH----HHHHHHHHT---CS-EEE--ETTTSCHHHHHHHHTTTSCE
T ss_pred             CEEEEEeccccceeeeeecccccccccccccccchh----hHHHHHHcC---Cc-eee--ccCCcCHHHHHHHHhhcccc
Confidence            7899999999999999999988885 7888774322    223333332   12 223  3333333333333   2569


Q ss_pred             CEEEEcccc
Q 025786          147 DAVMHFAAV  155 (248)
Q Consensus       147 D~li~~Ag~  155 (248)
                      |++|.++|.
T Consensus        99 d~vid~~g~  107 (170)
T d1jvba2          99 DAVIDLNNS  107 (170)
T ss_dssp             EEEEESCCC
T ss_pred             hhhhccccc
Confidence            999999874

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.25  E-value=0.00075  Score=49.49  Aligned_cols=76  Identities=14%  Similarity=0.139  Sum_probs=50.5

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC-EEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc---CCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE---NAF  146 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~---~~i  146 (248)
                      .+|+|.|+ |++|...+..+...|+ +|+++++++.+    .+..+++.   .. .++..+-.+..+..+.++.   .++
T Consensus        28 d~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~r----l~~a~~~G---a~-~~~~~~~~~~~~~~~~~~~~~g~g~   98 (171)
T d1pl8a2          28 HKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATR----LSKAKEIG---AD-LVLQISKESPQEIARKVEGQLGCKP   98 (171)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHH----HHHHHHTT---CS-EEEECSSCCHHHHHHHHHHHHTSCC
T ss_pred             CEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHH----HHHHHHhC---Cc-ccccccccccccccccccccCCCCc
Confidence            78999986 9999999999999999 78888854322    22233332   11 2333444555555555443   468


Q ss_pred             CEEEEcccc
Q 025786          147 DAVMHFAAV  155 (248)
Q Consensus       147 D~li~~Ag~  155 (248)
                      |++|.+.|.
T Consensus        99 Dvvid~~G~  107 (171)
T d1pl8a2          99 EVTIECTGA  107 (171)
T ss_dssp             SEEEECSCC
T ss_pred             eEEEeccCC
Confidence            999999873

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=97.14  E-value=0.0013  Score=47.16  Aligned_cols=75  Identities=21%  Similarity=0.325  Sum_probs=53.7

Q ss_pred             EEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEEE
Q 025786           72 HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVMH  151 (248)
Q Consensus        72 ~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li~  151 (248)
                      +++|.|. |-+|..++++|.++|++|++++..+   +...+..++..  ...+.++.+|.+|++.++++--+ +.|.+|-
T Consensus         5 HiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~---~~~~~~~~~~~--~~~~~vi~Gd~~d~~~L~~a~i~-~a~~vi~   77 (153)
T d1id1a_           5 HFIVCGH-SILAINTILQLNQRGQNVTVISNLP---EDDIKQLEQRL--GDNADVIPGDSNDSSVLKKAGID-RCRAILA   77 (153)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCEEEEECCC---HHHHHHHHHHH--CTTCEEEESCTTSHHHHHHHTTT-TCSEEEE
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEeccc---hhHHHHHHHhh--cCCcEEEEccCcchHHHHHhccc-cCCEEEE
Confidence            6888886 8999999999999999999988432   22222222222  23688899999999888766432 5788875


Q ss_pred             cc
Q 025786          152 FA  153 (248)
Q Consensus       152 ~A  153 (248)
                      +.
T Consensus        78 ~~   79 (153)
T d1id1a_          78 LS   79 (153)
T ss_dssp             CS
T ss_pred             cc
Confidence            43

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=97.13  E-value=0.00027  Score=52.35  Aligned_cols=74  Identities=16%  Similarity=0.107  Sum_probs=46.6

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC-EEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCC---HHHHHHHhhcCCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD---AKAVNKFFSENAF  146 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~---~~~~~~~~~~~~i  146 (248)
                      .+|+|.|+ |+||...+..+...|+ +|++++++..+    .+..+++.   .. .+  +|..+   .+.+.+.....++
T Consensus        29 ~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r----~~~a~~lG---a~-~~--i~~~~~~~~~~v~~~t~g~G~   97 (174)
T d1jqba2          29 SSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPIC----VEAAKFYG---AT-DI--LNYKNGHIEDQVMKLTNGKGV   97 (174)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHH----HHHHHHHT---CS-EE--ECGGGSCHHHHHHHHTTTSCE
T ss_pred             CEEEEEcC-Ccchhhhhhhhhcccccccccccchhhh----HHHHHhhC---cc-cc--ccccchhHHHHHHHHhhccCc
Confidence            78999975 9999999998888997 68888753222    22333342   11 22  23333   2334444333469


Q ss_pred             CEEEEcccc
Q 025786          147 DAVMHFAAV  155 (248)
Q Consensus       147 D~li~~Ag~  155 (248)
                      |++|.++|.
T Consensus        98 D~vid~~g~  106 (174)
T d1jqba2          98 DRVIMAGGG  106 (174)
T ss_dssp             EEEEECSSC
T ss_pred             ceEEEccCC
Confidence            999999884

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=97.07  E-value=0.00069  Score=49.90  Aligned_cols=72  Identities=21%  Similarity=0.259  Sum_probs=47.8

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li  150 (248)
                      ++|+|.| +||.+++++..|.+.+.+|+++.|+..+.+...+....    ...+..+..|-.+         ....|+||
T Consensus        19 k~vlIlG-aGGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~----~~~~~~~~~~~~~---------~~~~diiI   84 (171)
T d1p77a1          19 QHVLILG-AGGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQP----YGNIQAVSMDSIP---------LQTYDLVI   84 (171)
T ss_dssp             CEEEEEC-CSHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGG----GSCEEEEEGGGCC---------CSCCSEEE
T ss_pred             CEEEEEC-CcHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhh----ccccchhhhcccc---------ccccceee
Confidence            8899998 58999999999999888999998765443333333222    1234444443211         13689999


Q ss_pred             Eccccc
Q 025786          151 HFAAVA  156 (248)
Q Consensus       151 ~~Ag~~  156 (248)
                      |+....
T Consensus        85 N~tp~g   90 (171)
T d1p77a1          85 NATSAG   90 (171)
T ss_dssp             ECCCC-
T ss_pred             eccccc
Confidence            997654

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=97.06  E-value=0.0017  Score=47.72  Aligned_cols=73  Identities=15%  Similarity=0.213  Sum_probs=44.9

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEE-EecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHH---HHHHHhhcCCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTI-VDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAK---AVNKFFSENAF  146 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~---~~~~~~~~~~i  146 (248)
                      .+|+|.|+ |+||...+..+...|+++++ ++++    +...+..+++.    -..++  |..+.+   .+.++ ..+++
T Consensus        30 ~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~----~~k~~~a~~~G----a~~~i--~~~~~~~~~~i~~~-t~gg~   97 (174)
T d1f8fa2          30 SSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIV----ESRLELAKQLG----ATHVI--NSKTQDPVAAIKEI-TDGGV   97 (174)
T ss_dssp             CEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESC----HHHHHHHHHHT----CSEEE--ETTTSCHHHHHHHH-TTSCE
T ss_pred             CEEEEeCC-CHHHhhhhhcccccccceeeeeccH----HHHHHHHHHcC----CeEEE--eCCCcCHHHHHHHH-cCCCC
Confidence            78999987 99999999888888986654 4432    22233334442    12333  333322   22332 23579


Q ss_pred             CEEEEcccc
Q 025786          147 DAVMHFAAV  155 (248)
Q Consensus       147 D~li~~Ag~  155 (248)
                      |++|.+.|.
T Consensus        98 D~vid~~G~  106 (174)
T d1f8fa2          98 NFALESTGS  106 (174)
T ss_dssp             EEEEECSCC
T ss_pred             cEEEEcCCc
Confidence            999999874

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=97.02  E-value=0.00094  Score=48.80  Aligned_cols=72  Identities=15%  Similarity=0.131  Sum_probs=48.3

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li  150 (248)
                      .+|+|.|+ |+||...+..+...|+++++++++..+    .+..+++..   . .  ..|..+.+......  .++|++|
T Consensus        32 ~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~----~~~a~~lGa---d-~--~i~~~~~~~~~~~~--~~~D~vi   98 (168)
T d1uufa2          32 KKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAK----REAAKALGA---D-E--VVNSRNADEMAAHL--KSFDFIL   98 (168)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGG----HHHHHHHTC---S-E--EEETTCHHHHHTTT--TCEEEEE
T ss_pred             CEEEEecc-chHHHHHHHHhhcccccchhhccchhH----HHHHhccCC---c-E--EEECchhhHHHHhc--CCCceee
Confidence            78999985 999999998888899999988754332    233344421   1 1  23555555443333  3799999


Q ss_pred             Ecccc
Q 025786          151 HFAAV  155 (248)
Q Consensus       151 ~~Ag~  155 (248)
                      .+.|.
T Consensus        99 d~~g~  103 (168)
T d1uufa2          99 NTVAA  103 (168)
T ss_dssp             ECCSS
T ss_pred             eeeec
Confidence            99874

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=96.98  E-value=0.00037  Score=51.26  Aligned_cols=36  Identities=33%  Similarity=0.375  Sum_probs=31.2

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRG  106 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~  106 (248)
                      .+|||+||+|++|...++-....|++|+.+.++.++
T Consensus        25 ~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k   60 (167)
T d1tt7a2          25 GSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREA   60 (167)
T ss_dssp             CCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSST
T ss_pred             CEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHH
Confidence            679999999999999998888889999999865444

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=96.97  E-value=0.0042  Score=42.08  Aligned_cols=69  Identities=19%  Similarity=0.259  Sum_probs=52.8

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~l  149 (248)
                      ..+|.|.| +|-+|+-++....+-|++|+++|.+...  .+.+.         --.++.+|..|.+.+.++.....+|+|
T Consensus        11 ~~kigIlG-gGQL~rMla~aA~~lG~~v~v~d~~~~~--PA~~v---------a~~~i~~~~~d~~~l~~~~~~~~~Dvi   78 (111)
T d1kjqa2          11 ATRVMLLG-SGELGKEVAIECQRLGVEVIAVDRYADA--PAMHV---------AHRSHVINMLDGDALRRVVELEKPHYI   78 (111)
T ss_dssp             CCEEEEES-CSHHHHHHHHHHHTTTCEEEEEESSTTC--GGGGG---------SSEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred             CCEEEEEe-CCHHHHHHHHHHHHCCCEEEEEcCCCCC--chhhc---------CCeEEECCCCCHHHHHHHHHhhCCceE
Confidence            36899999 6999999999999999999999854322  11110         125678999999999998875568987


Q ss_pred             E
Q 025786          150 M  150 (248)
Q Consensus       150 i  150 (248)
                      -
T Consensus        79 T   79 (111)
T d1kjqa2          79 V   79 (111)
T ss_dssp             E
T ss_pred             E
Confidence            4

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=96.97  E-value=0.0021  Score=47.33  Aligned_cols=77  Identities=12%  Similarity=-0.005  Sum_probs=48.6

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC-EEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCC-HHHHHHHhhcCCCCE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD-AKAVNKFFSENAFDA  148 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~iD~  148 (248)
                      .+|+|+|+ |++|...+..+...|+ +|+++|.++.+.    +..+++.   ....+-.-|-.+ .+.+.+.....++|+
T Consensus        31 ~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl----~~Ak~~G---A~~~in~~~~~~~~~~~~~~~~g~G~d~  102 (176)
T d1d1ta2          31 STCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKF----EKAMAVG---ATECISPKDSTKPISEVLSEMTGNNVGY  102 (176)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGH----HHHHHHT---CSEEECGGGCSSCHHHHHHHHHTSCCCE
T ss_pred             CEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHH----HHHHhcC---CcEEECccccchHHHHHHHHhccccceE
Confidence            78999985 9999999999999995 799988544332    2333332   222221122221 233444444457999


Q ss_pred             EEEcccc
Q 025786          149 VMHFAAV  155 (248)
Q Consensus       149 li~~Ag~  155 (248)
                      +|.+.|.
T Consensus       103 vi~~~g~  109 (176)
T d1d1ta2         103 TFEVIGH  109 (176)
T ss_dssp             EEECSCC
T ss_pred             EEEeCCc
Confidence            9998874

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.96  E-value=0.00088  Score=48.99  Aligned_cols=74  Identities=18%  Similarity=0.152  Sum_probs=46.5

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li  150 (248)
                      .+|+|.|+ |++|...+..+...|++|+++++++.+.+    ..+++.   .. .++  |-.+.+++.+... ..+|+++
T Consensus        29 ~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~----~a~~lG---a~-~~i--~~~~~~~~~~~~~-~~~d~vi   96 (168)
T d1piwa2          29 KKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKRE----DAMKMG---AD-HYI--ATLEEGDWGEKYF-DTFDLIV   96 (168)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHH----HHHHHT---CS-EEE--EGGGTSCHHHHSC-SCEEEEE
T ss_pred             CEEEEECC-CCcchhHHHHhhhccccccccccchhHHH----HhhccC---Cc-EEe--eccchHHHHHhhh-cccceEE
Confidence            78999986 99999988888788999999987554332    233342   12 222  2222222222222 3689999


Q ss_pred             Eccccc
Q 025786          151 HFAAVA  156 (248)
Q Consensus       151 ~~Ag~~  156 (248)
                      .+.+..
T Consensus        97 ~~~~~~  102 (168)
T d1piwa2          97 VCASSL  102 (168)
T ss_dssp             ECCSCS
T ss_pred             EEecCC
Confidence            987643

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=96.96  E-value=0.00041  Score=51.50  Aligned_cols=36  Identities=33%  Similarity=0.429  Sum_probs=31.4

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRG  106 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~  106 (248)
                      .+|||+||+||+|...++-....|++|+++.+++.+
T Consensus        33 ~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k   68 (177)
T d1o89a2          33 GEIVVTGASGGVGSTAVALLHKLGYQVVAVSGREST   68 (177)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGG
T ss_pred             CcEEEEEccccchHHHHHHHHHcCCCeEEEecchhH
Confidence            589999999999999999888999999998864433

>d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.93  E-value=0.0018  Score=47.93  Aligned_cols=31  Identities=19%  Similarity=0.446  Sum_probs=27.0

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHC-CCEEEEE
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKD-SYRVTIV  100 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~-G~~V~~~  100 (248)
                      |++|.|.||||+.|.++++.|.++ ..+|..+
T Consensus         1 MikVaIiGATGyvG~eLlrlL~~HP~~ei~~l   32 (179)
T d2g17a1           1 MLNTLIVGASGYAGAELVSYVNRHPHMTITAL   32 (179)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTTEEEEEE
T ss_pred             CcEEEEECcccHHHHHHHHHHHhCCCCceEee
Confidence            689999999999999999999998 5577654

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=96.68  E-value=0.0076  Score=43.97  Aligned_cols=77  Identities=16%  Similarity=0.039  Sum_probs=47.1

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC-EEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCC-HHHHHHHhhcCCCCE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD-AKAVNKFFSENAFDA  148 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~iD~  148 (248)
                      .+|+|.|+ ||+|...+.++...|+ +|+++++++.+.    +..+++   +....+...|-.+ .+.+.+....+++|+
T Consensus        30 dtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~----~~a~~~---Ga~~~i~~~~~~~~~~~~~~~~~~~G~D~  101 (176)
T d2jhfa2          30 STCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKF----AKAKEV---GATECVNPQDYKKPIQEVLTEMSNGGVDF  101 (176)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGH----HHHHHT---TCSEEECGGGCSSCHHHHHHHHTTSCBSE
T ss_pred             CEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHH----HHHHHh---CCeeEEecCCchhHHHHHHHHHhcCCCCE
Confidence            89999998 7899999999999986 777777543322    222332   1122221222221 233334444468999


Q ss_pred             EEEcccc
Q 025786          149 VMHFAAV  155 (248)
Q Consensus       149 li~~Ag~  155 (248)
                      +|.+.|.
T Consensus       102 vid~~G~  108 (176)
T d2jhfa2         102 SFEVIGR  108 (176)
T ss_dssp             EEECSCC
T ss_pred             EEecCCc
Confidence            9999874

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=96.67  E-value=0.0042  Score=45.28  Aligned_cols=76  Identities=14%  Similarity=0.046  Sum_probs=44.6

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCE-EEEEecCCCCcchhhhhhhhhcCCCCceEEEEc-c-CCCHHHHHHHhhcCCCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYR-VTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYA-D-LGDAKAVNKFFSENAFD  147 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-D-l~~~~~~~~~~~~~~iD  147 (248)
                      .+|+|.|+ ||+|...+..+...|+. |+++++++    +..+..+++..   . .++.. | -.+.+...+....+++|
T Consensus        30 ~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~----~k~~~ak~lGa---~-~~i~~~~~~~~~~~~~~~~~~~g~D  100 (176)
T d2fzwa2          30 SVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINK----DKFARAKEFGA---T-ECINPQDFSKPIQEVLIEMTDGGVD  100 (176)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCG----GGHHHHHHHTC---S-EEECGGGCSSCHHHHHHHHTTSCBS
T ss_pred             CEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccH----HHHHHHHHhCC---c-EEEeCCchhhHHHHHHHHHcCCCCc
Confidence            78999987 68999999999999975 55554322    22333444421   1 12221 1 11222333333336799


Q ss_pred             EEEEcccc
Q 025786          148 AVMHFAAV  155 (248)
Q Consensus       148 ~li~~Ag~  155 (248)
                      ++|.+.|.
T Consensus       101 ~vid~~G~  108 (176)
T d2fzwa2         101 YSFECIGN  108 (176)
T ss_dssp             EEEECSCC
T ss_pred             EeeecCCC
Confidence            99999873

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=96.66  E-value=0.004  Score=45.63  Aligned_cols=76  Identities=17%  Similarity=0.008  Sum_probs=46.7

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC-EEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCC--HHHHHHHhhcCCCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD--AKAVNKFFSENAFD  147 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~iD  147 (248)
                      .+|+|.|+ |++|...+..+...|+ +|++++++..+.    +..+++.   . ..++...-.|  .+.+......+++|
T Consensus        29 ~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl----~~a~~lG---a-~~~i~~~~~d~~~~~~~~~~~~~G~d   99 (174)
T d1p0fa2          29 STCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKF----PKAIELG---A-TECLNPKDYDKPIYEVICEKTNGGVD   99 (174)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGH----HHHHHTT---C-SEEECGGGCSSCHHHHHHHHTTSCBS
T ss_pred             CEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHH----HHHHHcC---C-cEEEcCCCchhHHHHHHHHhcCCCCc
Confidence            78999985 9999999999999997 677777543322    2233332   1 1222211112  23333333336799


Q ss_pred             EEEEcccc
Q 025786          148 AVMHFAAV  155 (248)
Q Consensus       148 ~li~~Ag~  155 (248)
                      ++|-+.|.
T Consensus       100 ~vid~~g~  107 (174)
T d1p0fa2         100 YAVECAGR  107 (174)
T ss_dssp             EEEECSCC
T ss_pred             EEEEcCCC
Confidence            99998874

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=96.66  E-value=0.002  Score=47.04  Aligned_cols=33  Identities=15%  Similarity=0.315  Sum_probs=28.6

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC-EEEEEecCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLS  104 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~-~V~~~~r~~  104 (248)
                      ++|+|.|+ ||.+++++..|.+.|+ +|.++.|+.
T Consensus        18 ~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~   51 (167)
T d1npya1          18 AKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNV   51 (167)
T ss_dssp             SCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCH
T ss_pred             CeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccH
Confidence            78999985 9999999999999997 788887654

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=96.62  E-value=0.00066  Score=50.06  Aligned_cols=33  Identities=24%  Similarity=0.029  Sum_probs=30.1

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~  104 (248)
                      |+|.|.|+ |-+|..++..|+++|++|.+.+|.+
T Consensus         2 k~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~   34 (184)
T d1bg6a2           2 KTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDA   34 (184)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred             CEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCH
Confidence            78999996 9999999999999999999998743

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=96.54  E-value=0.0059  Score=44.48  Aligned_cols=76  Identities=20%  Similarity=0.158  Sum_probs=44.6

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC-EEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~l  149 (248)
                      .+|+|.|+ |++|...+..+...|+ .|+++++++    +..+..+++.    ...++.-+=.+.+.+.+.....++|++
T Consensus        34 ~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~----~k~~~~~~~g----a~~~i~~~~~~~~~~~~~~~~~g~d~v  104 (172)
T d1h2ba2          34 AYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKE----EKLKLAERLG----ADHVVDARRDPVKQVMELTRGRGVNVA  104 (172)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSH----HHHHHHHHTT----CSEEEETTSCHHHHHHHHTTTCCEEEE
T ss_pred             CEEEEeCC-ChHHHHHHHHHHhhcCcccccccchh----HHHHHHhhcc----cceeecCcccHHHHHHHhhCCCCceEE
Confidence            78999885 9999999988888886 556666432    2223333332    123333221122333333222469999


Q ss_pred             EEcccc
Q 025786          150 MHFAAV  155 (248)
Q Consensus       150 i~~Ag~  155 (248)
                      |.++|.
T Consensus       105 id~~g~  110 (172)
T d1h2ba2         105 MDFVGS  110 (172)
T ss_dssp             EESSCC
T ss_pred             EEecCc
Confidence            999884

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=96.50  E-value=0.011  Score=43.14  Aligned_cols=76  Identities=14%  Similarity=0.103  Sum_probs=47.1

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC-EEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCC--CHHHHHHHhhcCCCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG--DAKAVNKFFSENAFD  147 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~--~~~~~~~~~~~~~iD  147 (248)
                      .+|+|.| +|+||...+..+...|+ +|++++.++.+    .+..+++.   . ...+...-.  ..+.+.+....+++|
T Consensus        30 ~~VlV~G-~G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r----~~~a~~~G---a-~~~i~~~~~~~~~~~~~~~~~~~G~d  100 (174)
T d1e3ia2          30 STCAVFG-LGCVGLSAIIGCKIAGASRIIAIDINGEK----FPKAKALG---A-TDCLNPRELDKPVQDVITELTAGGVD  100 (174)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCSEEEEECSCGGG----HHHHHHTT---C-SEEECGGGCSSCHHHHHHHHHTSCBS
T ss_pred             CEEEEEC-CChHHHHHHHHHHHhCCceeeeeccchHH----HHHHHHhC---C-CcccCCccchhhhhhhHhhhhcCCCc
Confidence            7899997 59999999999999998 56666643322    23333332   1 122222111  223334444446899


Q ss_pred             EEEEcccc
Q 025786          148 AVMHFAAV  155 (248)
Q Consensus       148 ~li~~Ag~  155 (248)
                      ++|.+.|.
T Consensus       101 ~vie~~G~  108 (174)
T d1e3ia2         101 YSLDCAGT  108 (174)
T ss_dssp             EEEESSCC
T ss_pred             EEEEeccc
Confidence            99999884

>d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Thermotoga maritima [TaxId: 2336]

Probab=96.45  E-value=0.0086  Score=43.96  Aligned_cols=32  Identities=19%  Similarity=0.334  Sum_probs=26.9

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCC-CEEEEEe
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDS-YRVTIVD  101 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G-~~V~~~~  101 (248)
                      |++|.|.||||+.|.++++.|.++- .++..+.
T Consensus         1 MikVaIvGATGyvG~eLirlL~~HP~~ei~~l~   33 (176)
T d1vkna1           1 MIRAGIIGATGYTGLELVRLLKNHPEAKITYLS   33 (176)
T ss_dssp             CEEEEEESTTSHHHHHHHHHHHHCTTEEEEEEE
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhCCCceEEEee
Confidence            6899999999999999999998865 3666554

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=96.43  E-value=0.0025  Score=47.82  Aligned_cols=76  Identities=16%  Similarity=0.108  Sum_probs=45.4

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC-EEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCC-HHHHHHHhhcCCCCE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD-AKAVNKFFSENAFDA  148 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~iD~  148 (248)
                      .+|+|.|+ |++|...+..+...|+ +|+++++++.+    .+..+++   +....+...+ .+ .+.+.++....++|+
T Consensus        27 ~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~r----l~~a~~~---Ga~~~~~~~~-~~~~~~i~~~t~g~g~D~   97 (195)
T d1kola2          27 STVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPAR----LAHAKAQ---GFEIADLSLD-TPLHEQIAALLGEPEVDC   97 (195)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHH----HHHHHHT---TCEEEETTSS-SCHHHHHHHHHSSSCEEE
T ss_pred             CEEEEECc-CHHHHHHHHHHHhhcccceeeecccchh----hHhhhhc---cccEEEeCCC-cCHHHHHHHHhCCCCcEE
Confidence            79999985 9999888888877887 77777753322    2222333   1122111111 12 234444444457999


Q ss_pred             EEEcccc
Q 025786          149 VMHFAAV  155 (248)
Q Consensus       149 li~~Ag~  155 (248)
                      +|.+.|.
T Consensus        98 vid~vG~  104 (195)
T d1kola2          98 AVDAVGF  104 (195)
T ss_dssp             EEECCCT
T ss_pred             EEECccc
Confidence            9999884

>d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Vibrio cholerae [TaxId: 666]

Probab=96.36  E-value=0.03  Score=39.63  Aligned_cols=31  Identities=19%  Similarity=0.304  Sum_probs=24.2

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCC----CEEEEEe
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDS----YRVTIVD  101 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G----~~V~~~~  101 (248)
                      |+|.|.||||+.|.++++.|+++.    .++..+.
T Consensus         1 mKVaIiGATGyvG~eLi~lLl~~~~~p~~~i~~~s   35 (147)
T d1mb4a1           1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFS   35 (147)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEE
T ss_pred             CEEEEECCccHHHHHHHHHHHhcCCCCceEEEEec
Confidence            469999999999999999888653    3555443

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.21  E-value=0.0055  Score=44.26  Aligned_cols=34  Identities=26%  Similarity=0.491  Sum_probs=30.2

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCC
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~  104 (248)
                      |++|-+.| .|-+|+.+++.|+++|++|.+.+|+.
T Consensus         1 M~kIg~IG-lG~MG~~iA~~L~~~g~~v~~~d~~~   34 (162)
T d3cuma2           1 MKQIAFIG-LGHMGAPMATNLLKAGYLLNVFDLVQ   34 (162)
T ss_dssp             CCEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred             CCEEEEEE-EHHHHHHHHHHHHHCCCeEEEEECch
Confidence            57888886 79999999999999999999998754

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.14  E-value=0.038  Score=41.12  Aligned_cols=32  Identities=28%  Similarity=0.300  Sum_probs=27.4

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNL  103 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~  103 (248)
                      |+|.|. |.|++|..++..|+++|++|++.|.+
T Consensus         1 MkI~Vi-GlG~vGl~~a~~la~~g~~V~g~D~n   32 (202)
T d1mv8a2           1 MRISIF-GLGYVGAVCAGCLSARGHEVIGVDVS   32 (202)
T ss_dssp             CEEEEE-CCSTTHHHHHHHHHHTTCEEEEECSC
T ss_pred             CEEEEE-CCCHhHHHHHHHHHhCCCcEEEEeCC
Confidence            346667 58999999999999999999999853

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.12  E-value=0.0023  Score=47.92  Aligned_cols=36  Identities=33%  Similarity=0.421  Sum_probs=31.9

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCC
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRG  106 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~  106 (248)
                      .++|.|.|+ |-+|+.+|..++..|++|++.|+++..
T Consensus         4 IkkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~   39 (192)
T d1f0ya2           4 VKHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDI   39 (192)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             eEEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHH
Confidence            378999997 999999999999999999999976543

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.08  E-value=0.008  Score=43.36  Aligned_cols=32  Identities=22%  Similarity=0.162  Sum_probs=28.3

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNL  103 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~  103 (248)
                      .+|+|.|+ |++|...+..+...|++|++++++
T Consensus        29 ~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~   60 (166)
T d1llua2          29 QWVAISGI-GGLGHVAVQYARAMGLHVAAIDID   60 (166)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CEEEEeec-cccHHHHHHHHHHcCCccceecch
Confidence            78999885 999999999888899999999854

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=96.04  E-value=0.016  Score=41.32  Aligned_cols=47  Identities=17%  Similarity=0.280  Sum_probs=33.8

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHC--CCEEEEEecCCCCcchhhhhhhhh
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKD--SYRVTIVDNLSRGNIGAVKVLQEL  117 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~  117 (248)
                      ||+|.|.|+||-||.....-+.+.  .++|+.+.- .++.+.+.+...++
T Consensus         1 MK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa-~~N~~~L~~q~~~f   49 (151)
T d1q0qa2           1 MKQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVA-GKNVTRMVEQCLEF   49 (151)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEE-SSCHHHHHHHHHHH
T ss_pred             CCeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEe-cCcHHHHHHHHHHH
Confidence            689999999999999999988776  468887642 13334444444444

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=96.01  E-value=0.0023  Score=46.45  Aligned_cols=33  Identities=24%  Similarity=0.226  Sum_probs=28.2

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~  104 (248)
                      |+|.|.| .|.+|..+++.|.++|++|++.+|+.
T Consensus         1 MkI~iIG-~G~mG~~lA~~l~~~g~~V~~~d~~~   33 (165)
T d2f1ka2           1 MKIGVVG-LGLIGASLAGDLRRRGHYLIGVSRQQ   33 (165)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred             CEEEEEe-ecHHHHHHHHHHHHCCCEEEEEECCc
Confidence            3577776 59999999999999999999998653

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=95.98  E-value=0.004  Score=45.78  Aligned_cols=40  Identities=23%  Similarity=0.336  Sum_probs=31.4

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhh
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVK  112 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~  112 (248)
                      |+|+|.| +||.+++++..|.+.| +|+++.|+..+.+.+.+
T Consensus        19 k~vlIlG-aGG~arai~~aL~~~~-~i~I~nR~~~ka~~l~~   58 (177)
T d1nvta1          19 KNIVIYG-AGGAARAVAFELAKDN-NIIIANRTVEKAEALAK   58 (177)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHH
T ss_pred             CEEEEEC-CcHHHHHHHHHHcccc-ceeeehhhhhHHHHHHH
Confidence            8999998 5889999999998777 89998876554444433

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=95.87  E-value=0.0094  Score=42.23  Aligned_cols=31  Identities=23%  Similarity=0.392  Sum_probs=25.7

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC---EEEEEe
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY---RVTIVD  101 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~---~V~~~~  101 (248)
                      ++|.|.||||++|+++++.|.++++   ++..+.
T Consensus         3 mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~   36 (144)
T d2hjsa1           3 LNVAVVGATGSVGEALVGLLDERDFPLHRLHLLA   36 (144)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEe
Confidence            6799999999999999999987654   566554

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=95.86  E-value=0.006  Score=39.71  Aligned_cols=32  Identities=19%  Similarity=0.262  Sum_probs=29.3

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNL  103 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~  103 (248)
                      |+|+|.|. |..|.++++.|.++|++|++.|..
T Consensus         6 K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~   37 (93)
T d2jfga1           6 KNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTR   37 (93)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESS
T ss_pred             CEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCC
Confidence            89999986 889999999999999999999854

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=95.81  E-value=0.0068  Score=44.61  Aligned_cols=31  Identities=29%  Similarity=0.411  Sum_probs=27.7

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEec
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDN  102 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r  102 (248)
                      |+|.|.| +|-.|.+++..|+++|++|.+.+|
T Consensus         1 MkI~ViG-aG~~GtalA~~la~~g~~V~l~~r   31 (180)
T d1txga2           1 MIVSILG-AGAMGSALSVPLVDNGNEVRIWGT   31 (180)
T ss_dssp             CEEEEES-CCHHHHHHHHHHHHHCCEEEEECC
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHCCCEEEEEEe
Confidence            5677888 599999999999999999999876

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=95.77  E-value=0.0069  Score=43.63  Aligned_cols=34  Identities=26%  Similarity=0.414  Sum_probs=28.7

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSR  105 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~  105 (248)
                      |+|-|.| .|-+|+.+++.|+++|++|++.+|++.
T Consensus         1 MkIgiIG-lG~MG~~~A~~L~~~G~~V~~~d~~~~   34 (161)
T d1vpda2           1 MKVGFIG-LGIMGKPMSKNLLKAGYSLVVSDRNPE   34 (161)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHH
T ss_pred             CEEEEEe-hhHHHHHHHHHHHHCCCeEEEEeCCcc
Confidence            3466776 799999999999999999999987543

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=95.75  E-value=0.023  Score=41.14  Aligned_cols=75  Identities=20%  Similarity=0.251  Sum_probs=53.1

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li  150 (248)
                      -+|+|.| .|-.|..-++....-|++|.+.|.+..+.    +.++....  ..++.   -..+.+.+.+.++  +.|+||
T Consensus        33 a~V~ViG-aGvaG~~A~~~A~~lGA~V~~~D~~~~~l----~~l~~~~~--~~~~~---~~~~~~~l~~~~~--~aDivI  100 (168)
T d1pjca1          33 GKVVILG-GGVVGTEAAKMAVGLGAQVQIFDINVERL----SYLETLFG--SRVEL---LYSNSAEIETAVA--EADLLI  100 (168)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHH----HHHHHHHG--GGSEE---EECCHHHHHHHHH--TCSEEE
T ss_pred             cEEEEEC-CChHHHHHHHHHhhCCCEEEEEeCcHHHH----HHHHHhhc--cccee---ehhhhhhHHHhhc--cCcEEE
Confidence            6899998 58999999999999999999999543322    22222221  22333   2457788888887  579999


Q ss_pred             Ecccccc
Q 025786          151 HFAAVAY  157 (248)
Q Consensus       151 ~~Ag~~~  157 (248)
                      ..+-+..
T Consensus       101 ~aalipG  107 (168)
T d1pjca1         101 GAVLVPG  107 (168)
T ss_dssp             ECCCCTT
T ss_pred             EeeecCC
Confidence            9987654

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=95.71  E-value=0.049  Score=39.23  Aligned_cols=76  Identities=16%  Similarity=0.138  Sum_probs=45.6

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC-EEEEEecCCCCcchhhhhhhhhcCCCCceEEEEc-cCC-CHHHHHHHhhcCCCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYA-DLG-DAKAVNKFFSENAFD  147 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-Dl~-~~~~~~~~~~~~~iD  147 (248)
                      .+|+|.|+ |++|...+.++...|. +|+++++++.+    .+..+++.   . -.++.. +-. ..+.+.+....+++|
T Consensus        30 ~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~r----l~~a~~~G---A-d~~in~~~~~~~~~~~~~~~~~~G~d  100 (175)
T d1cdoa2          30 STCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDK----FEKAKVFG---A-TDFVNPNDHSEPISQVLSKMTNGGVD  100 (175)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGG----HHHHHHTT---C-CEEECGGGCSSCHHHHHHHHHTSCBS
T ss_pred             CEEEEEec-CCccchHHHHHHHHhhchheeecchHHH----HHHHHHcC---C-cEEEcCCCcchhHHHHHHhhccCCcc
Confidence            78999985 7788888888888887 57777653322    23333432   1 122221 111 123444444446799


Q ss_pred             EEEEcccc
Q 025786          148 AVMHFAAV  155 (248)
Q Consensus       148 ~li~~Ag~  155 (248)
                      ++|.+.|.
T Consensus       101 ~vid~~G~  108 (175)
T d1cdoa2         101 FSLECVGN  108 (175)
T ss_dssp             EEEECSCC
T ss_pred             eeeeecCC
Confidence            99999884

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=95.69  E-value=0.003  Score=46.98  Aligned_cols=36  Identities=22%  Similarity=0.314  Sum_probs=31.7

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCC
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRG  106 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~  106 (248)
                      .++|.|.|+ |-+|+.+|..++..|++|++.|+++..
T Consensus         4 I~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~   39 (186)
T d1wdka3           4 VKQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEHG   39 (186)
T ss_dssp             CSSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHHH
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHHH
Confidence            478999997 999999999999999999999975443

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=95.63  E-value=0.008  Score=41.52  Aligned_cols=69  Identities=16%  Similarity=0.084  Sum_probs=46.3

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li  150 (248)
                      |+++|.| -|-+|.++++.|.  |.+|++++..+..    .+....     ..+.++.+|.++++.++++-- .+.+.+|
T Consensus         1 kHivI~G-~g~~g~~l~~~L~--~~~i~vi~~d~~~----~~~~~~-----~~~~~i~Gd~~~~~~L~~a~i-~~A~~vi   67 (129)
T d2fy8a1           1 RHVVICG-WSESTLECLRELR--GSEVFVLAEDENV----RKKVLR-----SGANFVHGDPTRVSDLEKANV-RGARAVI   67 (129)
T ss_dssp             CCEEEES-CCHHHHHHHHTSC--GGGEEEEESCTTH----HHHHHH-----TTCEEEESCTTSHHHHHHTTC-TTCSEEE
T ss_pred             CEEEEEC-CCHHHHHHHHHHc--CCCCEEEEcchHH----HHHHHh-----cCccccccccCCHHHHHHhhh-hcCcEEE
Confidence            5688888 5889999999994  5667777643221    121121     257889999999988877432 3567777


Q ss_pred             Ec
Q 025786          151 HF  152 (248)
Q Consensus       151 ~~  152 (248)
                      -+
T Consensus        68 ~~   69 (129)
T d2fy8a1          68 VN   69 (129)
T ss_dssp             EC
T ss_pred             Ee
Confidence            43

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=95.56  E-value=0.0029  Score=47.19  Aligned_cols=35  Identities=23%  Similarity=0.235  Sum_probs=30.6

Q ss_pred             CCceEEEEecCCchhHHHHHHHHHHCCCEEEEEecC
Q 025786           68 EGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNL  103 (248)
Q Consensus        68 ~~~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~  103 (248)
                      ..|++|.|.| +|-.|.+++..|++.|++|.+.+|.
T Consensus         5 ~~m~KI~ViG-aG~wGtAlA~~La~~g~~V~l~~r~   39 (189)
T d1n1ea2           5 LYLNKAVVFG-SGAFGTALAMVLSKKCREVCVWHMN   39 (189)
T ss_dssp             CCEEEEEEEC-CSHHHHHHHHHHHTTEEEEEEECSC
T ss_pred             ceeceEEEEC-CCHHHHHHHHHHHHcCCeEEEEEec
Confidence            3468899998 5889999999999999999999864

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=95.48  E-value=0.011  Score=43.17  Aligned_cols=36  Identities=11%  Similarity=0.231  Sum_probs=30.7

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCc
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGN  107 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~  107 (248)
                      .+|-|.| -|-+|..+++.|+++|++|++.+|++.+.
T Consensus         3 ~nIg~IG-lG~MG~~mA~~L~~~G~~V~v~dr~~~~~   38 (176)
T d2pgda2           3 ADIALIG-LAVMGQNLILNMNDHGFVVCAFNRTVSKV   38 (176)
T ss_dssp             BSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSTHHH
T ss_pred             CcEEEEe-EhHHHHHHHHHHHHCCCeEEEEcCCHHHH
Confidence            5678887 59999999999999999999999765443

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=95.44  E-value=0.0053  Score=44.54  Aligned_cols=34  Identities=24%  Similarity=0.461  Sum_probs=28.9

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCC--EEEEEecCC
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLS  104 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~--~V~~~~r~~  104 (248)
                      ||+|+|.| .|.||..+++.|.+.|+  +|++.|++.
T Consensus         1 Mk~I~IIG-~G~mG~sla~~L~~~g~~~~I~~~D~~~   36 (171)
T d2g5ca2           1 MQNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDINP   36 (171)
T ss_dssp             CCEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred             CCEEEEEc-cCHHHHHHHHHHHhcCCCeEEEEEECCh
Confidence            68899997 69999999999999996  678877543

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=95.43  E-value=0.013  Score=40.01  Aligned_cols=33  Identities=24%  Similarity=0.422  Sum_probs=29.7

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~  104 (248)
                      ++++|.| +|++|.++|..|.+.|.+|+++.+.+
T Consensus        31 ~~vvIIG-gG~iG~E~A~~l~~~g~~Vtli~~~~   63 (121)
T d1d7ya2          31 SRLLIVG-GGVIGLELAATARTAGVHVSLVETQP   63 (121)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CeEEEEC-cchhHHHHHHHhhcccceEEEEeecc
Confidence            7888888 59999999999999999999998654

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=95.40  E-value=0.013  Score=42.16  Aligned_cols=32  Identities=25%  Similarity=0.117  Sum_probs=27.6

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNL  103 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~  103 (248)
                      .+|+|.|+ |.||...+..+...|++|++++++
T Consensus        29 ~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~   60 (168)
T d1rjwa2          29 EWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIG   60 (168)
T ss_dssp             CEEEEECC-STTHHHHHHHHHHTTCEEEEECSC
T ss_pred             CEEEEeec-ccchhhhhHHHhcCCCeEeccCCC
Confidence            78999874 999999999999999999998753

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=95.31  E-value=0.016  Score=39.67  Aligned_cols=33  Identities=42%  Similarity=0.663  Sum_probs=29.3

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~  104 (248)
                      ++|+|.| +|++|.++|..|.+.|.+|+++.+..
T Consensus        31 k~vvViG-gG~iG~E~A~~l~~~g~~Vtlie~~~   63 (123)
T d1nhpa2          31 NNVVVIG-SGYIGIEAAEAFAKAGKKVTVIDILD   63 (123)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CEEEEEC-ChHHHHHHHHHhhccceEEEEEEecC
Confidence            7888887 69999999999999999999998643

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=95.29  E-value=0.016  Score=39.22  Aligned_cols=33  Identities=27%  Similarity=0.453  Sum_probs=29.6

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~  104 (248)
                      ++++|.| +|++|.++|..|.+.|.+|+++.|..
T Consensus        23 ~~v~IiG-gG~ig~E~A~~l~~~G~~Vtlve~~~   55 (117)
T d1ebda2          23 KSLVVIG-GGYIGIELGTAYANFGTKVTILEGAG   55 (117)
T ss_dssp             SEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CeEEEEC-CCccceeeeeeecccccEEEEEEecc
Confidence            7899998 59999999999999999999998643

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.27  E-value=0.0096  Score=42.30  Aligned_cols=33  Identities=24%  Similarity=0.532  Sum_probs=29.9

Q ss_pred             CCCceEEEEecCCchhHHHHHHHHHHCCCEEEEEe
Q 025786           67 EEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVD  101 (248)
Q Consensus        67 ~~~~k~vlITGasg~IG~~la~~L~~~G~~V~~~~  101 (248)
                      ..+ |+|||.|| |.+|..-++.|++.|++|++++
T Consensus        11 l~g-krvLViGg-G~va~~ka~~Ll~~GA~VtVva   43 (150)
T d1kyqa1          11 LKD-KRILLIGG-GEVGLTRLYKLMPTGCKLTLVS   43 (150)
T ss_dssp             CTT-CEEEEEEE-SHHHHHHHHHHGGGTCEEEEEE
T ss_pred             eCC-CEEEEECC-CHHHHHHHHHHHHCCCEEEEEe
Confidence            345 99999997 8899999999999999999986

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.17  E-value=0.016  Score=39.65  Aligned_cols=33  Identities=21%  Similarity=0.304  Sum_probs=29.5

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~  104 (248)
                      ++++|.| +|+||.++|..|.+.|.+|+++.+.+
T Consensus        24 ~~~vIiG-~G~ig~E~A~~l~~lG~~Vtii~~~~   56 (122)
T d1v59a2          24 KRLTIIG-GGIIGLEMGSVYSRLGSKVTVVEFQP   56 (122)
T ss_dssp             SEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CeEEEEC-CCchHHHHHHHHHhhCcceeEEEecc
Confidence            7899998 59999999999999999999997643

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=95.15  E-value=0.038  Score=37.43  Aligned_cols=33  Identities=24%  Similarity=0.307  Sum_probs=29.7

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~  104 (248)
                      ++++|.| +|+||.++|..|.+.|.+|.++.+..
T Consensus        23 ~~i~IiG-~G~ig~E~A~~l~~~G~~Vtiv~~~~   55 (119)
T d3lada2          23 GKLGVIG-AGVIGLELGSVWARLGAEVTVLEAMD   55 (119)
T ss_dssp             SEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CeEEEEC-CChHHHHHHHHHHHcCCceEEEEeec
Confidence            7899998 59999999999999999999998644

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.14  E-value=0.092  Score=37.97  Aligned_cols=80  Identities=19%  Similarity=0.074  Sum_probs=50.0

Q ss_pred             CCCceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccC--CCHHHHHHHhhcC
Q 025786           67 EEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL--GDAKAVNKFFSEN  144 (248)
Q Consensus        67 ~~~~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl--~~~~~~~~~~~~~  144 (248)
                      ..| |+++|.|-|.-+|+-++..|+++|+.|+.+.......  ... .....-    ......|+  ...+.+++...  
T Consensus        27 l~G-K~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~~~~~--~~~-~~~~~~----~~~~~~~~~~~~~~~lk~~~~--   96 (171)
T d1edza1          27 LYG-KKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQK--FTR-GESLKL----NKHHVEDLGEYSEDLLKKCSL--   96 (171)
T ss_dssp             TTT-CEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEE--EES-CCCSSC----CCCEEEEEEECCHHHHHHHHH--
T ss_pred             CCC-CEEEEECCccccHHHHHHHHHHCCCEEEEeccccccc--ccc-ccceee----eeeccccccccchhHHhhccc--
Confidence            345 9999999999999999999999999999876321110  000 000000    00011222  34566777665  


Q ss_pred             CCCEEEEccccc
Q 025786          145 AFDAVMHFAAVA  156 (248)
Q Consensus       145 ~iD~li~~Ag~~  156 (248)
                      ..|++|..+|..
T Consensus        97 ~aDIvIsavG~p  108 (171)
T d1edza1          97 DSDVVITGVPSE  108 (171)
T ss_dssp             HCSEEEECCCCT
T ss_pred             cCCEEEEccCCC
Confidence            469999888754

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.13  E-value=0.016  Score=39.72  Aligned_cols=33  Identities=21%  Similarity=0.257  Sum_probs=29.8

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~  104 (248)
                      |+++|.| +|+||.++|..|.+.|.+|+++.|..
T Consensus        23 k~vvIvG-gG~iG~E~A~~l~~~G~~Vtlv~~~~   55 (125)
T d3grsa2          23 GRSVIVG-AGYIAVEMAGILSALGSKTSLMIRHD   55 (125)
T ss_dssp             SEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CEEEEEc-CCccHHHHHHHHhcCCcEEEEEeecc
Confidence            7899998 58999999999999999999998754

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=95.12  E-value=0.024  Score=38.26  Aligned_cols=33  Identities=24%  Similarity=0.341  Sum_probs=29.4

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~  104 (248)
                      ++++|.| +|++|.++|..|.+.|.+|+++.|.+
T Consensus        22 ~~vvIiG-gG~ig~E~A~~l~~~G~~Vtlve~~~   54 (116)
T d1gesa2          22 ERVAVVG-AGYIGVELGGVINGLGAKTHLFEMFD   54 (116)
T ss_dssp             SEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CEEEEEC-CChhhHHHHHHhhccccEEEEEeecc
Confidence            6788887 59999999999999999999998654

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=95.10  E-value=0.02  Score=39.58  Aligned_cols=68  Identities=15%  Similarity=0.166  Sum_probs=46.6

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEE-ecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc---CCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIV-DNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE---NAF  146 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~---~~i  146 (248)
                      |+|.|.|++|-+|+.+++.+.++|++++.. ++.   ..      +.+ . ..+   +..|++.++.+.+.++.   .++
T Consensus         1 mki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~---~~------~~~-~-~~D---VvIDFS~p~~~~~~l~~~~~~~~   66 (128)
T d1vm6a3           1 MKYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVN---GV------EEL-D-SPD---VVIDFSSPEALPKTVDLCKKYRA   66 (128)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEEETT---EE------EEC-S-CCS---EEEECSCGGGHHHHHHHHHHHTC
T ss_pred             CEEEEECCCCHHHHHHHHHHhcCCCeEEEEECCC---cH------HHh-c-cCC---EEEEecCHHHHHHHHHHHHhcCC
Confidence            469999999999999999999999988754 321   11      011 1 112   45799999887776654   455


Q ss_pred             CEEEEc
Q 025786          147 DAVMHF  152 (248)
Q Consensus       147 D~li~~  152 (248)
                      -+|+=.
T Consensus        67 p~ViGT   72 (128)
T d1vm6a3          67 GLVLGT   72 (128)
T ss_dssp             EEEECC
T ss_pred             CEEEEc
Confidence            666633

>d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=95.06  E-value=0.24  Score=33.83  Aligned_cols=32  Identities=19%  Similarity=0.149  Sum_probs=27.3

Q ss_pred             ceEEEEecCC---chhHHHHHHHHHHCC-CEEEEEe
Q 025786           70 VTHVLVTGGA---GYIGSHAALRLLKDS-YRVTIVD  101 (248)
Q Consensus        70 ~k~vlITGas---g~IG~~la~~L~~~G-~~V~~~~  101 (248)
                      .++|.|.|+|   +-.|..+.+.|.+.| ++|+.+.
T Consensus         8 PksIAVVGaS~~~~~~g~~v~~~L~~~~~g~v~pVn   43 (129)
T d2csua1           8 PKGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVN   43 (129)
T ss_dssp             CSEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEEC
T ss_pred             CCeEEEEccCCCCCCcHHHHHHHHHHcCCCcEEEec
Confidence            3899999999   899999999988766 6888874

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=95.05  E-value=0.041  Score=36.83  Aligned_cols=93  Identities=14%  Similarity=0.100  Sum_probs=56.9

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~l  149 (248)
                      +|+|+|.|+ |-+|..-++.|++.|++|++++..  ..++..+..    . ..++.++.-+..+. ++    .  +.+.+
T Consensus        12 ~k~vlVvG~-G~va~~ka~~ll~~ga~v~v~~~~--~~~~~~~~~----~-~~~i~~~~~~~~~~-dl----~--~~~lv   76 (113)
T d1pjqa1          12 DRDCLIVGG-GDVAERKARLLLEAGARLTVNALT--FIPQFTVWA----N-EGMLTLVEGPFDET-LL----D--SCWLA   76 (113)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTBEEEEEESS--CCHHHHHHH----T-TTSCEEEESSCCGG-GG----T--TCSEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCeEEEEecc--CChHHHHHH----h-cCCceeeccCCCHH-Hh----C--CCcEE
Confidence            399999995 789999999999999999998732  222222221    1 23567666655432 22    1  46777


Q ss_pred             EEcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEecc
Q 025786          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSST  196 (248)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS  196 (248)
                      +.+.+         +.        ..+..+...+++.+  ..||+..
T Consensus        77 ~~at~---------d~--------~~n~~i~~~a~~~~--ilVNv~D  104 (113)
T d1pjqa1          77 IAATD---------DD--------TVNQRVSDAAESRR--IFCNVVD  104 (113)
T ss_dssp             EECCS---------CH--------HHHHHHHHHHHHTT--CEEEETT
T ss_pred             eecCC---------CH--------HHHHHHHHHHHHcC--CEEEeCC
Confidence            75432         10        11334556666654  5788765

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=95.01  E-value=0.017  Score=39.45  Aligned_cols=32  Identities=25%  Similarity=0.498  Sum_probs=28.8

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNL  103 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~  103 (248)
                      ++++|.| +|++|.++|..|.+.|++|+++.+.
T Consensus        33 ~~vvIiG-gG~iG~E~A~~l~~~g~~Vtlv~~~   64 (122)
T d1xhca2          33 GEAIIIG-GGFIGLELAGNLAEAGYHVKLIHRG   64 (122)
T ss_dssp             SEEEEEE-CSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             CcEEEEC-CcHHHHHHHHHhhcccceEEEEecc
Confidence            6788887 5999999999999999999999764

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=95.01  E-value=0.025  Score=38.36  Aligned_cols=33  Identities=15%  Similarity=0.184  Sum_probs=29.6

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~  104 (248)
                      ++++|.| +|++|.++|..|.+.|.+|+++.|..
T Consensus        23 ~~v~IiG-gG~iG~E~A~~l~~~g~~Vtlv~~~~   55 (117)
T d1onfa2          23 KKIGIVG-SGYIAVELINVIKRLGIDSYIFARGN   55 (117)
T ss_dssp             SEEEEEC-CSHHHHHHHHHHHTTTCEEEEECSSS
T ss_pred             CEEEEEC-CchHHHHHHHHHHhccccceeeehhc
Confidence            7889988 59999999999999999999998644

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=95.01  E-value=0.08  Score=38.68  Aligned_cols=34  Identities=24%  Similarity=0.163  Sum_probs=30.2

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCC
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~  104 (248)
                      ++++.|.| .|.||+.+++.+..-|.+|++.++..
T Consensus        42 gk~vgIiG-~G~IG~~va~~l~~~g~~v~~~d~~~   75 (181)
T d1qp8a1          42 GEKVAVLG-LGEIGTRVGKILAALGAQVRGFSRTP   75 (181)
T ss_dssp             TCEEEEES-CSTHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             CceEEEec-cccccccceeeeeccccccccccccc
Confidence            39999998 68899999999999999999998643

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=94.81  E-value=0.081  Score=34.36  Aligned_cols=33  Identities=30%  Similarity=0.382  Sum_probs=26.7

Q ss_pred             ceEEEEecCCchhH-HHHHHHHHHCCCEEEEEecC
Q 025786           70 VTHVLVTGGAGYIG-SHAALRLLKDSYRVTIVDNL  103 (248)
Q Consensus        70 ~k~vlITGasg~IG-~~la~~L~~~G~~V~~~~r~  103 (248)
                      .|++.+.| -||+| +++|+.|.++|++|...|+.
T Consensus         8 ~~~ihfiG-igG~GMs~LA~~L~~~G~~VsGSD~~   41 (96)
T d1p3da1           8 VQQIHFIG-IGGAGMSGIAEILLNEGYQISGSDIA   41 (96)
T ss_dssp             CCEEEEET-TTSTTHHHHHHHHHHHTCEEEEEESC
T ss_pred             CCEEEEEE-ECHHHHHHHHHHHHhCCCEEEEEeCC
Confidence            47888887 45566 56799999999999999853

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=94.80  E-value=0.027  Score=37.93  Aligned_cols=33  Identities=30%  Similarity=0.540  Sum_probs=29.1

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~  104 (248)
                      ++++|.| +|++|.++|..|.+.|++|+++.+.+
T Consensus        22 ~~vvIiG-gG~~G~E~A~~l~~~g~~Vtlve~~~   54 (115)
T d1lvla2          22 QHLVVVG-GGYIGLELGIAYRKLGAQVSVVEARE   54 (115)
T ss_dssp             SEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CeEEEEC-CCHHHHHHHHHHhhcccceEEEeeec
Confidence            6788887 69999999999999999999997643

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=94.64  E-value=0.11  Score=36.65  Aligned_cols=47  Identities=19%  Similarity=0.256  Sum_probs=33.4

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHC--CCEEEEEecCCCCcchhhhhhhhh
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKD--SYRVTIVDNLSRGNIGAVKVLQEL  117 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~  117 (248)
                      +|+|.|.|+||-||.....-+.+.  .++|+.+.- .++.+.+.+..+++
T Consensus         2 pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa-~~N~~~L~~q~~ef   50 (150)
T d1r0ka2           2 PRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTA-NRNVKDLADAAKRT   50 (150)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEE-SSCHHHHHHHHHHT
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEe-CCCHHHHHHHHHhh
Confidence            489999999999999999888765  578887642 13334444444444

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=94.60  E-value=0.0091  Score=43.63  Aligned_cols=35  Identities=23%  Similarity=0.446  Sum_probs=28.9

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRG  106 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~  106 (248)
                      |+|-|.| .|-+|..+++.|+++|++|++.+|+..+
T Consensus         2 MkIGvIG-lG~MG~~ma~~L~~~G~~V~~~dr~~~~   36 (178)
T d1pgja2           2 MDVGVVG-LGVMGANLALNIAEKGFKVAVFNRTYSK   36 (178)
T ss_dssp             BSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSHHH
T ss_pred             CEEEEEe-ehHHHHHHHHHHHHCCCeEEEEECCHHH
Confidence            3466665 8999999999999999999999865433

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=94.58  E-value=0.11  Score=40.88  Aligned_cols=32  Identities=22%  Similarity=0.260  Sum_probs=28.7

Q ss_pred             CCceEEEEecCCchhHHHHHHHHHHCCCEEEEEe
Q 025786           68 EGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVD  101 (248)
Q Consensus        68 ~~~k~vlITGasg~IG~~la~~L~~~G~~V~~~~  101 (248)
                      .+ ++|+|-| .|-+|.++++.|.+.|++|+.++
T Consensus        35 ~g-ktvaIqG-fGnVG~~~A~~L~e~Gakvv~vs   66 (293)
T d1hwxa1          35 GD-KTFAVQG-FGNVGLHSMRYLHRFGAKCVAVG   66 (293)
T ss_dssp             TT-CEEEEEC-CSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CC-CEEEEEC-CCHHHHHHHHHHHHCCCEEEEEE
Confidence            44 8999998 69999999999999999999875

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=94.57  E-value=0.028  Score=38.95  Aligned_cols=34  Identities=35%  Similarity=0.639  Sum_probs=30.0

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSR  105 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~  105 (248)
                      ++++|.| +|++|.++|..|.+.|.+|.++.+.++
T Consensus        36 k~v~VIG-gG~iG~E~A~~l~~~g~~Vtvie~~~~   69 (133)
T d1q1ra2          36 NRLVVIG-GGYIGLEVAATAIKANMHVTLLDTAAR   69 (133)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CEEEEEC-CchHHHHHHHHHHhhCcceeeeeeccc
Confidence            7888887 699999999999999999999986543

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=94.43  E-value=0.093  Score=35.90  Aligned_cols=75  Identities=23%  Similarity=0.340  Sum_probs=51.0

Q ss_pred             ceEEEEecCC----------chhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHH
Q 025786           70 VTHVLVTGGA----------GYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNK  139 (248)
Q Consensus        70 ~k~vlITGas----------g~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~  139 (248)
                      .|+|||.|+.          -+-+.+.+++|.+.|++++++..++..-.--    .+.   ..++   ..+--+.+.+.+
T Consensus         7 ~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~TVstd----~d~---aD~l---YfePlt~e~v~~   76 (127)
T d1a9xa3           7 IKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIMTD----PEM---ADAT---YIEPIHWEVVRK   76 (127)
T ss_dssp             CCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCGGGC----GGG---SSEE---ECSCCCHHHHHH
T ss_pred             CCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHhhhcC----hhh---ccee---eeecCCHHHHHH
Confidence            3899999973          3568899999999999999987544321100    001   1223   344456788999


Q ss_pred             HhhcCCCCEEEEccc
Q 025786          140 FFSENAFDAVMHFAA  154 (248)
Q Consensus       140 ~~~~~~iD~li~~Ag  154 (248)
                      +++..++|.++--.|
T Consensus        77 Ii~~E~pd~il~~~G   91 (127)
T d1a9xa3          77 IIEKERPDAVLPTMG   91 (127)
T ss_dssp             HHHHHCCSEEECSSS
T ss_pred             HHHHhCcCCeEEEee
Confidence            998878999885444

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=94.38  E-value=0.032  Score=42.25  Aligned_cols=32  Identities=38%  Similarity=0.558  Sum_probs=29.4

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNL  103 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~  103 (248)
                      ++|+|.| +|-.|..+|..|+++|++|.+++|.
T Consensus         7 ~kVvVIG-aGiaGl~~A~~L~~~G~~V~vier~   38 (268)
T d1c0pa1           7 KRVVVLG-SGVIGLSSALILARKGYSVHILARD   38 (268)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CcEEEEC-ccHHHHHHHHHHHHCCCCEEEEeCC
Confidence            6899998 5999999999999999999999874

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=94.23  E-value=0.052  Score=39.67  Aligned_cols=34  Identities=29%  Similarity=0.318  Sum_probs=30.7

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCC
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~  104 (248)
                      .|+|+|.| +|..|.+.|..|+++|++|++..+.+
T Consensus        43 ~k~V~IIG-aGPAGL~AA~~la~~G~~Vtl~E~~~   76 (179)
T d1ps9a3          43 KKNLAVVG-AGPAGLAFAINAAARGHQVTLFDAHS   76 (179)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred             CcEEEEEC-ccHHHHHHHHHHHhhccceEEEeccC
Confidence            38999998 59999999999999999999998754

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=94.20  E-value=0.037  Score=37.74  Aligned_cols=33  Identities=33%  Similarity=0.413  Sum_probs=29.9

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~  104 (248)
                      ++++|.| +|+||.++|..|.+.|.+|.++.|.+
T Consensus        26 ~~~viiG-~G~iglE~A~~~~~~G~~Vtvi~~~~   58 (123)
T d1dxla2          26 KKLVVIG-AGYIGLEMGSVWGRIGSEVTVVEFAS   58 (123)
T ss_dssp             SEEEESC-CSHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CeEEEEc-cchHHHHHHHHHHhcCCeEEEEEEcc
Confidence            7899998 59999999999999999999998654

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.17  E-value=0.035  Score=46.43  Aligned_cols=31  Identities=26%  Similarity=0.489  Sum_probs=27.8

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC-EEEEEec
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDN  102 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~-~V~~~~r  102 (248)
                      .+|||.|+ ||||.++++.|+..|. ++.++|.
T Consensus        38 ~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~   69 (426)
T d1yovb1          38 CKVLVIGA-GGLGCELLKNLALSGFRQIHVIDM   69 (426)
T ss_dssp             CCEEEECS-STTHHHHHHHHHTTTCCCEEEECC
T ss_pred             CeEEEECC-CHHHHHHHHHHHHcCCCeEEEEEC
Confidence            68999996 8899999999999998 7888884

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=94.16  E-value=0.072  Score=39.52  Aligned_cols=35  Identities=23%  Similarity=0.081  Sum_probs=30.7

Q ss_pred             CCceEEEEecCCchhHHHHHHHHHHCCCEEEEEecC
Q 025786           68 EGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNL  103 (248)
Q Consensus        68 ~~~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~  103 (248)
                      ..+++|.|.| .|.||+.+++.|..-|.+|++.++.
T Consensus        41 l~gk~vgIiG-~G~IG~~va~~l~~fg~~V~~~d~~   75 (197)
T d1j4aa1          41 VRDQVVGVVG-TGHIGQVFMQIMEGFGAKVITYDIF   75 (197)
T ss_dssp             GGGSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             ccCCeEEEec-ccccchhHHHhHhhhcccccccCcc
Confidence            3449999998 7999999999999999999998753

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=94.11  E-value=0.056  Score=38.16  Aligned_cols=34  Identities=21%  Similarity=0.326  Sum_probs=27.6

Q ss_pred             eEEEE-ecCCchhHHHHHHHHHHCCCEEEEEecCC
Q 025786           71 THVLV-TGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (248)
Q Consensus        71 k~vlI-TGasg~IG~~la~~L~~~G~~V~~~~r~~  104 (248)
                      +.++| -.+.|+||.++|..|++.|++|+++.+..
T Consensus        40 ~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~   74 (156)
T d1djqa2          40 KRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH   74 (156)
T ss_dssp             SEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CceEEEecCCChHHHHHHHHHHHcCCeEEEEecCC
Confidence            44444 44679999999999999999999998643

>d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative semialdehyde dehydrogenase
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=94.04  E-value=0.078  Score=38.76  Aligned_cols=31  Identities=23%  Similarity=0.557  Sum_probs=26.1

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCC-CEEEEEe
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDS-YRVTIVD  101 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G-~~V~~~~  101 (248)
                      .+|.|.||||+.|.++++.|.++- .++..+.
T Consensus         6 ikVaIlGATGyvG~elirLL~~HP~~ei~~l~   37 (183)
T d2cvoa1           6 VRIAVLGASGYTGAEIVRLLANHPQFRIKVMT   37 (183)
T ss_dssp             EEEEEESCSSHHHHHHHHHHTTCSSEEEEEEE
T ss_pred             cEEEEECcccHHHHHHHHHHHhCCCceEEEEe
Confidence            679999999999999999999874 3666554

>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=94.03  E-value=0.16  Score=34.37  Aligned_cols=75  Identities=19%  Similarity=0.214  Sum_probs=49.7

Q ss_pred             ceEEEEecCC----------chhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHH
Q 025786           70 VTHVLVTGGA----------GYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNK  139 (248)
Q Consensus        70 ~k~vlITGas----------g~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~  139 (248)
                      .|+|||.|+.          -+-+.+.++.|.+.|++++++..++..-.-          ...-..-+...--..+.+.+
T Consensus         4 ~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~~~IliN~NPeTVst----------d~d~aD~lYfeplt~e~v~~   73 (121)
T d1a9xa4           4 REKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVST----------DYDTSDRLYFEPVTLEDVLE   73 (121)
T ss_dssp             SCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECCCTTSSTT----------STTSSSEEECCCCSHHHHHH
T ss_pred             CCEEEEECCCcCcccccchhhHHHHHHHHHHHhcCCeEEEEecChhhhhc----------ChhhcCceEEccCCHHHHHH
Confidence            3789999973          367889999999999999998755433210          01111122334446788888


Q ss_pred             HhhcCCCCEEEEccc
Q 025786          140 FFSENAFDAVMHFAA  154 (248)
Q Consensus       140 ~~~~~~iD~li~~Ag  154 (248)
                      +++..++|.|+-.-|
T Consensus        74 Ii~~E~p~~ii~~~G   88 (121)
T d1a9xa4          74 IVRIEKPKGVIVQYG   88 (121)
T ss_dssp             HHHHHCCSEEECSSS
T ss_pred             HHHHhCCCEEEeehh
Confidence            888778898874433

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=93.96  E-value=0.05  Score=37.20  Aligned_cols=33  Identities=21%  Similarity=0.360  Sum_probs=29.6

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~  104 (248)
                      ++++|.| +|+||.++|..|.+.|.+|+++.+.+
T Consensus        27 ~~vvIiG-gG~IG~E~A~~~~~~G~~Vtive~~~   59 (125)
T d1ojta2          27 GKLLIIG-GGIIGLEMGTVYSTLGSRLDVVEMMD   59 (125)
T ss_dssp             SEEEEES-CSHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CeEEEEC-CCHHHHHHHHHhhcCCCEEEEEEeec
Confidence            7899998 59999999999999999999997643

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=93.91  E-value=0.05  Score=37.02  Aligned_cols=31  Identities=29%  Similarity=0.295  Sum_probs=28.2

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEec
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDN  102 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r  102 (248)
                      ++++|.| +|.||.++|..|.+.|.+|+++.|
T Consensus        21 ~~vvIIG-gG~iG~E~A~~l~~lG~~Vtii~~   51 (122)
T d1h6va2          21 GKTLVVG-ASYVALECAGFLAGIGLDVTVMVR   51 (122)
T ss_dssp             CSEEEEC-CSHHHHHHHHHHHHTTCCEEEEES
T ss_pred             CeEEEEC-CCccHHHHHHHHhhcCCeEEEEEe
Confidence            6788888 599999999999999999999875

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=93.91  E-value=0.034  Score=42.81  Aligned_cols=33  Identities=33%  Similarity=0.401  Sum_probs=29.3

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~  104 (248)
                      |+|+|.| +|.-|...|..|+++|++|+++.+..
T Consensus         2 KkV~IIG-aG~aGL~aA~~La~~G~~V~vlE~~~   34 (373)
T d1seza1           2 KRVAVIG-AGVSGLAAAYKLKIHGLNVTVFEAEG   34 (373)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHTTSCEEEEECSSS
T ss_pred             CEEEEEC-cCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            7899998 59999999999999999999998643

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=93.85  E-value=0.019  Score=40.75  Aligned_cols=34  Identities=26%  Similarity=0.425  Sum_probs=27.6

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCC-CEEEEEecCCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDS-YRVTIVDNLSR  105 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G-~~V~~~~r~~~  105 (248)
                      |+|.+.| +|-+|.++++.|++.| ++|++.+|+..
T Consensus         1 MkI~fIG-~G~MG~ai~~~l~~~~~~~i~v~~r~~~   35 (152)
T d1yqga2           1 MNVYFLG-GGNMAAAVAGGLVKQGGYRIYIANRGAE   35 (152)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHCSCEEEEECSSHH
T ss_pred             CEEEEEc-CcHHHHHHHHHHHHCCCCcEEEEeCChh
Confidence            3567776 5999999999999887 89999886543

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=93.82  E-value=0.068  Score=35.96  Aligned_cols=33  Identities=12%  Similarity=0.109  Sum_probs=29.5

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~  104 (248)
                      ++++|.| +|.||.++|..|.+.|.+|.++.+.+
T Consensus        23 ~~vvVvG-gG~ig~E~A~~l~~~g~~vt~i~~~~   55 (121)
T d1mo9a2          23 STVVVVG-GSKTAVEYGCFFNATGRRTVMLVRTE   55 (121)
T ss_dssp             SEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhcchhheEeeccc
Confidence            7888888 69999999999999999999998643

>d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Phosphopantothenoylcysteine synthetase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.67  E-value=0.028  Score=44.55  Aligned_cols=30  Identities=23%  Similarity=0.255  Sum_probs=24.6

Q ss_pred             EEEecCCchhHHHHHHHHHHCCCEEEEEec
Q 025786           73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDN  102 (248)
Q Consensus        73 vlITGasg~IG~~la~~L~~~G~~V~~~~r  102 (248)
                      .+=--.||-.|.++|+.|..+|++|+++.+
T Consensus        39 ~ItN~SSGk~G~alA~~~~~~Ga~V~li~g   68 (290)
T d1p9oa_          39 FLDNFSSGRRGATSAEAFLAAGYGVLFLYR   68 (290)
T ss_dssp             EEEECCCCHHHHHHHHHHHHTTCEEEEEEE
T ss_pred             EeCCCCchHHHHHHHHHHHHcCCEEEEEec
Confidence            333345789999999999999999998864

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=93.64  E-value=0.041  Score=40.03  Aligned_cols=34  Identities=24%  Similarity=0.302  Sum_probs=29.7

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC-EEEEEecCCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSR  105 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~-~V~~~~r~~~  105 (248)
                      |+|+|.| +|..|...|..|+++|+ +|+++.++..
T Consensus         5 ~kVaIIG-aGpaGl~aA~~l~~~G~~~V~v~E~~~~   39 (196)
T d1gtea4           5 AKIALLG-AGPASISCASFLARLGYSDITIFEKQEY   39 (196)
T ss_dssp             CCEEEEC-CSHHHHHHHHHHHHTTCCCEEEEESSSS
T ss_pred             CEEEEEC-ChHHHHHHHHHHHHCCCCeEEEEEecCc
Confidence            8899998 59999999999999998 5989887543

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=93.59  E-value=0.032  Score=43.06  Aligned_cols=30  Identities=30%  Similarity=0.445  Sum_probs=27.5

Q ss_pred             EEEecCCchhHHHHHHHHHHCCCEEEEEecC
Q 025786           73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNL  103 (248)
Q Consensus        73 vlITGasg~IG~~la~~L~~~G~~V~~~~r~  103 (248)
                      |+|.| +|-+|..+|.+|+++|++|+++++.
T Consensus         7 vvIIG-aGi~Gls~A~~La~~G~~V~vlE~~   36 (276)
T d1ryia1           7 AVVIG-GGIIGSAIAYYLAKENKNTALFESG   36 (276)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCcEEEEeCC
Confidence            88888 5999999999999999999999864

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=93.33  E-value=0.16  Score=38.59  Aligned_cols=31  Identities=29%  Similarity=0.454  Sum_probs=28.1

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC-EEEEEec
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDN  102 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~-~V~~~~r  102 (248)
                      ++|+|.| .||+|.+++..|+..|. +++++|.
T Consensus        31 ~~VliiG-~GglGs~va~~La~~Gvg~i~lvD~   62 (247)
T d1jw9b_          31 SRVLIVG-LGGLGCAASQYLASAGVGNLTLLDF   62 (247)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECC
T ss_pred             CCEEEEC-CCHHHHHHHHHHHHcCCCeEEEECC
Confidence            7999999 79999999999999998 7888873

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=93.28  E-value=0.21  Score=34.51  Aligned_cols=68  Identities=19%  Similarity=0.185  Sum_probs=42.7

Q ss_pred             EEEEecCCchhHHHHHHHHHHC-CCEEEEE-ecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc---CCC
Q 025786           72 HVLVTGGAGYIGSHAALRLLKD-SYRVTIV-DNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE---NAF  146 (248)
Q Consensus        72 ~vlITGasg~IG~~la~~L~~~-G~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~---~~i  146 (248)
                      +|.|.|++|-+|+.+++.+.+. +++++.. ++   . +....    ....+.+   +..|++.++.+.+.++.   .++
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~---~-~~~~~----~~~~~~D---vvIDFS~p~~~~~~~~~~~~~~~   69 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDA---G-DPLSL----LTDGNTE---VVIDFTHPDVVMGNLEFLIDNGI   69 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECT---T-CCTHH----HHTTTCS---EEEECCCTTTHHHHHHHHHHTTC
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEec---C-Cchhh----hccccCC---EEEEcccHHHHHHHHHHHHhcCC
Confidence            6899999999999999987664 5677654 32   1 11111    1111112   45799988877665543   456


Q ss_pred             CEEE
Q 025786          147 DAVM  150 (248)
Q Consensus       147 D~li  150 (248)
                      -+|+
T Consensus        70 ~~Vi   73 (135)
T d1yl7a1          70 HAVV   73 (135)
T ss_dssp             EEEE
T ss_pred             CEEE
Confidence            6666

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=93.18  E-value=0.03  Score=39.71  Aligned_cols=32  Identities=16%  Similarity=0.166  Sum_probs=27.0

Q ss_pred             EEEEecCCchhHHHHHHHHHHCCCEEEEEecCC
Q 025786           72 HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (248)
Q Consensus        72 ~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~  104 (248)
                      +|.+.| +|-+|.++++.|.+.|++|++.+|+.
T Consensus         2 kIg~IG-~G~mG~al~~~l~~~~~~i~v~~r~~   33 (152)
T d2ahra2           2 KIGIIG-VGKMASAIIKGLKQTPHELIISGSSL   33 (152)
T ss_dssp             EEEEEC-CSHHHHHHHHHHTTSSCEEEEECSSH
T ss_pred             EEEEEe-ccHHHHHHHHHHHhCCCeEEEEcChH
Confidence            466665 89999999999999999999987643

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=93.08  E-value=0.1  Score=39.34  Aligned_cols=33  Identities=39%  Similarity=0.580  Sum_probs=29.8

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~  104 (248)
                      ++|+|.| +|..|...|..|+++|++|+++.+..
T Consensus        50 k~VvIIG-aGpAGl~aA~~l~~~G~~v~l~E~~~   82 (233)
T d1djqa3          50 DSVLIVG-AGPSGSEAARVLMESGYTVHLTDTAE   82 (233)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             ceEEEEc-ccHHHHHHHHHHHHhccceeeEeecc
Confidence            8999998 59999999999999999999998643

>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=93.07  E-value=0.05  Score=38.67  Aligned_cols=25  Identities=24%  Similarity=0.356  Sum_probs=22.3

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY   95 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~   95 (248)
                      =+|.|.||||++|.++++.|.++.+
T Consensus         2 ~kVaIvGATGyvG~eLirlL~~H~f   26 (154)
T d2gz1a1           2 YTVAVVGATGAVGAQMIKMLEESTL   26 (154)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHTCCS
T ss_pred             CEEEEECCCcHHHHHHHHHHHcCCC
Confidence            4799999999999999999988864

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=93.06  E-value=0.046  Score=38.57  Aligned_cols=31  Identities=23%  Similarity=0.112  Sum_probs=26.3

Q ss_pred             EEEEecCCchhHHHHHHHHHHCCCEEEEEecC
Q 025786           72 HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNL  103 (248)
Q Consensus        72 ~vlITGasg~IG~~la~~L~~~G~~V~~~~r~  103 (248)
                      +|-|.| .|-+|+.+++.|+++|++|++.++.
T Consensus         2 kIgiIG-~G~mG~~ia~~l~~~g~~v~~~~~~   32 (152)
T d1i36a2           2 RVGFIG-FGEVAQTLASRLRSRGVEVVTSLEG   32 (152)
T ss_dssp             EEEEES-CSHHHHHHHHHHHHTTCEEEECCTT
T ss_pred             EEEEEc-HHHHHHHHHHHHHHCCCeEEEEcCc
Confidence            466665 7999999999999999999887753

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=93.03  E-value=0.063  Score=42.73  Aligned_cols=33  Identities=27%  Similarity=0.532  Sum_probs=29.5

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~  104 (248)
                      |+|+|.| +|.-|..+|..|+++|++|.++.++.
T Consensus         3 KKI~IIG-aG~sGL~aA~~L~k~G~~V~viEk~~   35 (314)
T d2bi7a1           3 KKILIVG-AGFSGAVIGRQLAEKGHQVHIIDQRD   35 (314)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred             CEEEEEC-CcHHHHHHHHHHHhCCCCEEEEECCC
Confidence            8899998 69999999999999999999998543

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=92.98  E-value=0.25  Score=35.93  Aligned_cols=36  Identities=25%  Similarity=0.198  Sum_probs=30.3

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCc
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGN  107 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~  107 (248)
                      -+|+|.| .|-.|.+-++....-|+.|.+.|.+..+.
T Consensus        30 a~VvViG-aGvaG~~Aa~~A~~lGA~V~v~D~~~~~~   65 (183)
T d1l7da1          30 ARVLVFG-VGVAGLQAIATAKRLGAVVMATDVRAATK   65 (183)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCSTTH
T ss_pred             cEEEEEc-CcHHHHHHHHHHHHcCCEEEEEeccHHHH
Confidence            4789998 48999999999999999999999655443

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=92.83  E-value=0.047  Score=41.92  Aligned_cols=32  Identities=25%  Similarity=0.360  Sum_probs=28.1

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNL  103 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~  103 (248)
                      |+|+|.|| |.-|...|..|+++|++|+++.+.
T Consensus         1 m~V~IIGa-G~aGL~aA~~L~~~G~~V~vlE~~   32 (347)
T d2ivda1           1 MNVAVVGG-GISGLAVAHHLRSRGTDAVLLESS   32 (347)
T ss_dssp             CCEEEECC-BHHHHHHHHHHHTTTCCEEEECSS
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCCCEEEEecC
Confidence            45888885 999999999999999999999754

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=92.71  E-value=0.074  Score=40.38  Aligned_cols=33  Identities=24%  Similarity=0.304  Sum_probs=29.4

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~  104 (248)
                      ++|+|.| +|.-|..+|..|+++|++|+++++.+
T Consensus         5 ~kV~IiG-aG~aGl~~A~~L~~~G~~v~v~Er~~   37 (265)
T d2voua1           5 DRIAVVG-GSISGLTAALMLRDAGVDVDVYERSP   37 (265)
T ss_dssp             SEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CcEEEEC-cCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            6899998 59999999999999999999998643

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=92.68  E-value=0.18  Score=36.72  Aligned_cols=34  Identities=29%  Similarity=0.208  Sum_probs=29.7

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCC
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~  104 (248)
                      ++++.|.| .|.||+++++.+..-|.+|+..++..
T Consensus        44 ~k~vgiiG-~G~IG~~va~~~~~fg~~v~~~d~~~   77 (184)
T d1ygya1          44 GKTVGVVG-LGRIGQLVAQRIAAFGAYVVAYDPYV   77 (184)
T ss_dssp             TCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTS
T ss_pred             ceeeeecc-ccchhHHHHHHhhhccceEEeecCCC
Confidence            38898888 79999999999999999999988643

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=92.44  E-value=0.084  Score=41.19  Aligned_cols=32  Identities=34%  Similarity=0.504  Sum_probs=29.0

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNL  103 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~  103 (248)
                      |+|+|.| +|--|...|..|+++|++|+++.+.
T Consensus        31 kkV~IIG-aG~aGLsaA~~L~~~G~~V~vlE~~   62 (370)
T d2iida1          31 KHVVIVG-AGMAGLSAAYVLAGAGHQVTVLEAS   62 (370)
T ss_dssp             CEEEEEC-CBHHHHHHHHHHHHHTCEEEEECSS
T ss_pred             CeEEEEC-CCHHHHHHHHHHHHCCCCEEEEeCC
Confidence            7899998 5899999999999999999999754

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=92.41  E-value=0.025  Score=43.19  Aligned_cols=31  Identities=19%  Similarity=0.304  Sum_probs=28.6

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEec
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDN  102 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r  102 (248)
                      ++|+|-| .|-+|.++++.|.+.|++|++++.
T Consensus        40 ~~v~IqG-~GnVG~~~a~~L~~~Gakvv~~d~   70 (230)
T d1leha1          40 LAVSVQG-LGNVAKALCKKLNTEGAKLVVTDV   70 (230)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECS
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHCCCEEEeecc
Confidence            8999987 799999999999999999998873

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=92.30  E-value=0.099  Score=38.86  Aligned_cols=33  Identities=27%  Similarity=0.427  Sum_probs=29.6

Q ss_pred             CCceEEEEecCCchhHHHHHHHHHHCCCEEEEEec
Q 025786           68 EGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDN  102 (248)
Q Consensus        68 ~~~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r  102 (248)
                      .+ ++|+|-| .|-+|.++++.|.+.|++|++.+.
T Consensus        26 ~g-k~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~   58 (201)
T d1c1da1          26 DG-LTVLVQG-LGAVGGSLASLAAEAGAQLLVADT   58 (201)
T ss_dssp             TT-CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECS
T ss_pred             CC-CEEEEEC-CCHHHHHHHHHHHHCCCEEEEecc
Confidence            44 9999997 899999999999999999998874

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=92.28  E-value=0.4  Score=36.47  Aligned_cols=30  Identities=30%  Similarity=0.385  Sum_probs=27.9

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEe
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVD  101 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~  101 (248)
                      ++|+|-| .|-+|.++++.|.+.|++|+.++
T Consensus        32 ~~v~IqG-fGnVG~~~a~~L~~~Gakvv~vs   61 (242)
T d1v9la1          32 KTVAIQG-MGNVGRWTAYWLEKMGAKVIAVS   61 (242)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHTTTCEEEEEE
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHcCCeEEEee
Confidence            8999997 89999999999999999998775

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=92.20  E-value=0.17  Score=37.20  Aligned_cols=34  Identities=24%  Similarity=0.276  Sum_probs=30.2

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCC
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~  104 (248)
                      ++++.|.| .|-||+.+++.|..-|.+|+..++..
T Consensus        49 gktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~   82 (193)
T d1mx3a1          49 GETLGIIG-LGRVGQAVALRAKAFGFNVLFYDPYL   82 (193)
T ss_dssp             TCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTS
T ss_pred             CceEEEec-cccccccceeeeeccccceeeccCcc
Confidence            39999997 79999999999999999999988643

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=91.98  E-value=0.14  Score=36.71  Aligned_cols=33  Identities=21%  Similarity=0.390  Sum_probs=30.7

Q ss_pred             CCceEEEEecCCchhHHHHHHHHHHCCCEEEEEe
Q 025786           68 EGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVD  101 (248)
Q Consensus        68 ~~~k~vlITGasg~IG~~la~~L~~~G~~V~~~~  101 (248)
                      .| |+|+|.|.|.-+|+-++..|.++|+.|+++.
T Consensus        36 ~G-K~v~VIGrS~~VG~Pla~lL~~~gatVt~~h   68 (166)
T d1b0aa1          36 FG-LNAVVIGASNIVGRPMSMELLLAGCTTTVTH   68 (166)
T ss_dssp             TT-CEEEEECCCTTTHHHHHHHHHTTTCEEEEEC
T ss_pred             cc-ceEEEEeccccccHHHHHHHHHhhccccccc
Confidence            45 9999999999999999999999999999875

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=91.84  E-value=0.15  Score=37.29  Aligned_cols=34  Identities=26%  Similarity=0.224  Sum_probs=30.0

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCC
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~  104 (248)
                      .+++.|.| .|.||+++++.|..-|.+|...++..
T Consensus        44 ~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~   77 (188)
T d2naca1          44 AMHVGTVA-AGRIGLAVLRRLAPFDVHLHYTDRHR   77 (188)
T ss_dssp             TCEEEEEC-CSHHHHHHHHHHGGGTCEEEEECSSC
T ss_pred             ccceeecc-ccccchhhhhhhhccCceEEEEeecc
Confidence            38899988 79999999999999999999998643

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.79  E-value=0.12  Score=36.99  Aligned_cols=34  Identities=26%  Similarity=0.201  Sum_probs=30.6

Q ss_pred             CceEEEEecCCchhHHHHHHHHHHCCCEEEEEecC
Q 025786           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNL  103 (248)
Q Consensus        69 ~~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~  103 (248)
                      .+|+++|.| .|-||+.+|+.|...|++|++++..
T Consensus        23 ~Gk~v~V~G-yG~iG~g~A~~~rg~G~~V~v~e~d   56 (163)
T d1li4a1          23 AGKVAVVAG-YGDVGKGCAQALRGFGARVIITEID   56 (163)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred             cCCEEEEec-cccccHHHHHHHHhCCCeeEeeecc
Confidence            349999998 8999999999999999999998853

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=91.77  E-value=0.093  Score=38.84  Aligned_cols=31  Identities=26%  Similarity=0.265  Sum_probs=27.7

Q ss_pred             EEEecCCchhHHHHHHHHHHCCCEEEEEecCC
Q 025786           73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (248)
Q Consensus        73 vlITGasg~IG~~la~~L~~~G~~V~~~~r~~  104 (248)
                      |+|.| +|.-|...|..|+++|++|.++.+..
T Consensus         8 viViG-aG~~Gl~~A~~La~~G~~V~vlE~~~   38 (297)
T d2bcgg1           8 VIVLG-TGITECILSGLLSVDGKKVLHIDKQD   38 (297)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCCEEEEcCCC
Confidence            78887 79999999999999999999998653

>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=91.46  E-value=0.1  Score=41.07  Aligned_cols=33  Identities=21%  Similarity=0.389  Sum_probs=29.2

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecC
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNL  103 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~  103 (248)
                      |..|+|.| +|.-|..+|+.|+++|++|.++.++
T Consensus         1 M~dv~IIG-aG~sGl~~A~~L~~~g~~V~iiEk~   33 (298)
T d1i8ta1           1 MYDYIIVG-SGLFGAVCANELKKLNKKVLVIEKR   33 (298)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHGGGTCCEEEECSS
T ss_pred             CccEEEEC-CcHHHHHHHHHHHhCCCcEEEEECC
Confidence            46789998 5999999999999999999999754

>d2blna2 c.65.1.1 (A:1-203) Polymyxin resistance protein ArnA, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: Polymyxin resistance protein ArnA, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=91.41  E-value=0.48  Score=34.91  Aligned_cols=76  Identities=12%  Similarity=0.137  Sum_probs=42.8

Q ss_pred             EEEEecCCchhHHHHHHHHHHCCCEEEEEe-cCCCCcc-----hhhhhhhhhcCCCCceEEEE-ccCCCHHHHHHHhhcC
Q 025786           72 HVLVTGGAGYIGSHAALRLLKDSYRVTIVD-NLSRGNI-----GAVKVLQELFPEPGRLQFIY-ADLGDAKAVNKFFSEN  144 (248)
Q Consensus        72 ~vlITGasg~IG~~la~~L~~~G~~V~~~~-r~~~~~~-----~~~~~~~~~~~~~~~~~~~~-~Dl~~~~~~~~~~~~~  144 (248)
                      +|++.| ++..|..+.+.|.+.|++|..+. +...+..     ...+..++.     ++.++. -|+.+++.+ +.+++.
T Consensus         2 kiv~~~-~~~~g~~~l~~L~~~g~~I~~Vvt~~~~~~~~~~~~~~~~~a~~~-----~i~~~~~~~~~~~~~~-~~i~~~   74 (203)
T d2blna2           2 KTVVFA-YHDMGCLGIEALLAAGYEISAIFTHTDNPGEKAFYGSVARLAAER-----GIPVYAPDNVNHPLWV-ERIAQL   74 (203)
T ss_dssp             EEEEEE-CHHHHHHHHHHHHHTTCEEEEEECCCC------CCCCHHHHHHHH-----TCCEECCSCCCSHHHH-HHHHHT
T ss_pred             eEEEEe-cCHHHHHHHHHHHHCCCCEEEEEcCCCCCCcccccCHHHHHHHHc-----CCcceecccccchhhh-hhhhhh
Confidence            455554 67789999999999999997654 2111110     111111111     233333 466665544 445556


Q ss_pred             CCCEEEEccc
Q 025786          145 AFDAVMHFAA  154 (248)
Q Consensus       145 ~iD~li~~Ag  154 (248)
                      ++|++|....
T Consensus        75 ~~Dlii~~g~   84 (203)
T d2blna2          75 SPDVIFSFYY   84 (203)
T ss_dssp             CCSEEEEESC
T ss_pred             cccceeeeec
Confidence            8999887653

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.33  E-value=0.2  Score=36.08  Aligned_cols=34  Identities=26%  Similarity=0.358  Sum_probs=31.4

Q ss_pred             CCceEEEEecCCchhHHHHHHHHHHCCCEEEEEec
Q 025786           68 EGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDN  102 (248)
Q Consensus        68 ~~~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r  102 (248)
                      .| |+|+|.|.|.-+|+-++.-|.++|+.|+++..
T Consensus        38 ~G-k~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~   71 (170)
T d1a4ia1          38 AG-RHAVVVGRSKIVGAPMHDLLLWNNATVTTCHS   71 (170)
T ss_dssp             TT-CEEEEECCCTTTHHHHHHHHHHTTCEEEEECT
T ss_pred             cc-ceEEEEecCCccchHHHHHHHhccCceEEEec
Confidence            45 99999999999999999999999999998863

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=91.28  E-value=0.99  Score=32.77  Aligned_cols=35  Identities=20%  Similarity=0.133  Sum_probs=30.3

Q ss_pred             CCceEEEEecCCchhHHHHHHHHHHCCCEEEEEecC
Q 025786           68 EGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNL  103 (248)
Q Consensus        68 ~~~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~  103 (248)
                      ..++++.|.| .|.||+.+++.+..-|.+|+..++.
T Consensus        45 l~g~tvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~   79 (191)
T d1gdha1          45 LDNKTLGIYG-FGSIGQALAKRAQGFDMDIDYFDTH   79 (191)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECSS
T ss_pred             ecccceEEee-cccchHHHHHHHHhhcccccccccc
Confidence            3349999998 7999999999999999999998753

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=91.28  E-value=0.23  Score=36.67  Aligned_cols=36  Identities=28%  Similarity=0.204  Sum_probs=31.1

Q ss_pred             CCceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCC
Q 025786           68 EGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (248)
Q Consensus        68 ~~~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~  104 (248)
                      ..++++.|.| .|-||+.+++.|..-|.+|++.++..
T Consensus        43 l~~ktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~   78 (199)
T d1dxya1          43 LGQQTVGVMG-TGHIGQVAIKLFKGFGAKVIAYDPYP   78 (199)
T ss_dssp             GGGSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             ccceeeeeee-cccccccccccccccceeeeccCCcc
Confidence            3449999998 79999999999999999999988643

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=90.97  E-value=0.22  Score=33.22  Aligned_cols=32  Identities=28%  Similarity=0.298  Sum_probs=25.5

Q ss_pred             eEEEEecCCchhHHHHHHHHH---HCCCEEEEEecC
Q 025786           71 THVLVTGGAGYIGSHAALRLL---KDSYRVTIVDNL  103 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~---~~G~~V~~~~r~  103 (248)
                      ++++|.|| |++|.++|..|.   .+|.+|+++.+.
T Consensus        21 ~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~   55 (117)
T d1aoga2          21 RRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRG   55 (117)
T ss_dssp             SEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESS
T ss_pred             CeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEecc
Confidence            78999986 999999996554   456789998753

>d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=90.74  E-value=0.77  Score=34.71  Aligned_cols=30  Identities=23%  Similarity=0.321  Sum_probs=25.9

Q ss_pred             eEEEEecCCchhHHHHHHHHHHC-CCEEEEEe
Q 025786           71 THVLVTGGAGYIGSHAALRLLKD-SYRVTIVD  101 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~-G~~V~~~~  101 (248)
                      ++|+|-| .|-+|.++++.|.++ |++|+.+.
T Consensus        33 ~~v~IqG-fGnVG~~~a~~L~~~~G~kvv~vs   63 (239)
T d1gtma1          33 KTIAIQG-YGNAGYYLAKIMSEDFGMKVVAVS   63 (239)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCCEEEEEE
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHhcCcceeecc
Confidence            8999998 588999999999865 99988765

>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermotoga maritima [TaxId: 2336]

Probab=90.69  E-value=0.26  Score=36.17  Aligned_cols=82  Identities=17%  Similarity=0.073  Sum_probs=56.1

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li  150 (248)
                      ..+=+|-|+||.-.++.+.+ . +.+|+++|+.+...+.+.+.++..   ..++.++..+..+.+.+..-.....+|.|+
T Consensus        26 ~~lD~t~G~Gghs~~il~~~-~-~~~vi~~D~d~~~l~~a~~~l~~~---~~r~~~~~~~f~~~~~~~~~~~~~~vdgIl  100 (192)
T d1m6ya2          26 IILDCTVGEGGHSRAILEHC-P-GCRIIGIDVDSEVLRIAEEKLKEF---SDRVSLFKVSYREADFLLKTLGIEKVDGIL  100 (192)
T ss_dssp             EEEETTCTTSHHHHHHHHHC-T-TCEEEEEESCHHHHHHHHHHTGGG---TTTEEEEECCGGGHHHHHHHTTCSCEEEEE
T ss_pred             EEEEecCCCcHHHHHHHhcC-C-CCeEEEeechHHHHHHHHHhhccc---cccccchhHHHhhHHHHHHHcCCCCcceee
Confidence            45557888899988888876 3 468999996543333333333322   457999999988776665544446799998


Q ss_pred             Ecccccc
Q 025786          151 HFAAVAY  157 (248)
Q Consensus       151 ~~Ag~~~  157 (248)
                      --.|++.
T Consensus       101 ~DlGvSs  107 (192)
T d1m6ya2         101 MDLGVST  107 (192)
T ss_dssp             EECSCCH
T ss_pred             eccchhH
Confidence            8888753

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=90.68  E-value=0.43  Score=36.62  Aligned_cols=30  Identities=20%  Similarity=0.234  Sum_probs=27.8

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEe
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVD  101 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~  101 (248)
                      ++|+|.| .|-+|+++++.|.+.|++|+.++
T Consensus        37 ~~v~IQG-fGnVG~~~a~~L~e~Gakvvavs   66 (255)
T d1bgva1          37 KTVALAG-FGNVAWGAAKKLAELGAKAVTLS   66 (255)
T ss_dssp             CEEEECC-SSHHHHHHHHHHHHHTCEEEEEE
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHcCCeEEEEe
Confidence            8999998 79999999999999999998764

>d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=90.59  E-value=0.11  Score=38.88  Aligned_cols=34  Identities=32%  Similarity=0.355  Sum_probs=29.0

Q ss_pred             ceEEEEecCCchhHHH-----HHHHHHHCCCEEEEEecC
Q 025786           70 VTHVLVTGGAGYIGSH-----AALRLLKDSYRVTIVDNL  103 (248)
Q Consensus        70 ~k~vlITGasg~IG~~-----la~~L~~~G~~V~~~~r~  103 (248)
                      ||+|.|+++-||+|+.     +|..|+++|.+|.++|-.
T Consensus         1 ~kvIav~s~KGGvGKTtia~nlA~~la~~g~~VlliD~D   39 (232)
T d1hyqa_           1 VRTITVASGKGGTGKTTITANLGVALAQLGHDVTIVDAD   39 (232)
T ss_dssp             CEEEEEEESSSCSCHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             CEEEEEECCCCCChHHHHHHHHHHHHHhCCCCEEEEeCC
Confidence            6999999999999974     567788999999999854

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.52  E-value=0.21  Score=38.63  Aligned_cols=31  Identities=29%  Similarity=0.412  Sum_probs=27.8

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEec
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDN  102 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r  102 (248)
                      ++|+|.| +|.-|...|..|.++|++|.++..
T Consensus         6 ~kViVIG-aG~aGL~aA~~L~~~G~~V~VlEa   36 (449)
T d2dw4a2           6 GKVIIIG-SGVSGLAAARQLQSFGMDVTLLEA   36 (449)
T ss_dssp             CEEEEEC-CBHHHHHHHHHHHHTTCEEEEECS
T ss_pred             CcEEEEC-CCHHHHHHHHHHHhCCCCEEEEeC
Confidence            5799998 599999999999999999999864

>d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium pasteurianum [TaxId: 1501]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Nitrogenase iron protein
species: Clostridium pasteurianum [TaxId: 1501]

Probab=90.41  E-value=0.1  Score=40.23  Aligned_cols=34  Identities=21%  Similarity=0.236  Sum_probs=28.4

Q ss_pred             ceEEEEecCCchhHHHH-----HHHHHHCCCEEEEEecCC
Q 025786           70 VTHVLVTGGAGYIGSHA-----ALRLLKDSYRVTIVDNLS  104 (248)
Q Consensus        70 ~k~vlITGasg~IG~~l-----a~~L~~~G~~V~~~~r~~  104 (248)
                      ||+|.|+| -||+|+-.     +..|+++|++|.++|-.+
T Consensus         1 mr~Iai~g-KGGvGKTT~a~nLA~~LA~~G~rVllID~D~   39 (269)
T d1cp2a_           1 MRQVAIYG-KGGIGKSTTTQNLTSGLHAMGKTIMVVGCDP   39 (269)
T ss_dssp             CEEEEEEE-CTTSSHHHHHHHHHHHHHTTTCCEEEEEECT
T ss_pred             CCEEEEEC-CCcCCHHHHHHHHHHHHHhCCCcEEEEecCC
Confidence            68999998 99999865     458899999999998643

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=90.33  E-value=0.38  Score=30.53  Aligned_cols=32  Identities=22%  Similarity=0.189  Sum_probs=25.3

Q ss_pred             eEEEEecCCchhHH-HHHHHHHHCCCEEEEEecC
Q 025786           71 THVLVTGGAGYIGS-HAALRLLKDSYRVTIVDNL  103 (248)
Q Consensus        71 k~vlITGasg~IG~-~la~~L~~~G~~V~~~~r~  103 (248)
                      |+|-+.| -||+|. ++|+.|.++|++|...|+.
T Consensus         2 ~~ihfiG-IgG~GMs~LA~~L~~~G~~VsGSD~~   34 (89)
T d1j6ua1           2 MKIHFVG-IGGIGMSAVALHEFSNGNDVYGSNIE   34 (89)
T ss_dssp             CEEEEET-TTSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             cEEEEEe-ECHHHHHHHHHHHHhCCCeEEEEeCC
Confidence            4566666 566776 6899999999999999854

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=90.29  E-value=0.17  Score=35.67  Aligned_cols=32  Identities=28%  Similarity=0.327  Sum_probs=27.6

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC--EEEEEecC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNL  103 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~--~V~~~~r~  103 (248)
                      |+|+|.| +|.+|.++|..|.+.|.  +|+++++.
T Consensus         3 krivIvG-gG~~G~e~A~~l~~~~~~~~Vtlie~~   36 (186)
T d1fcda1           3 RKVVVVG-GGTGGATAAKYIKLADPSIEVTLIEPN   36 (186)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHCTTSEEEEECSC
T ss_pred             CcEEEEC-ccHHHHHHHHHHHHcCCCCcEEEEECC
Confidence            8999998 59999999999999885  78888754

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=90.20  E-value=0.32  Score=34.58  Aligned_cols=29  Identities=17%  Similarity=0.269  Sum_probs=24.9

Q ss_pred             eEEEEecCCchhHHHHHHHHHHC-CCEEEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKD-SYRVTI   99 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~-G~~V~~   99 (248)
                      .+|.|.|++|-+|+.+++.+.+. +.+++.
T Consensus         5 ikI~i~Ga~GrMG~~i~~~i~~~~~~~lv~   34 (162)
T d1diha1           5 IRVAIAGAGGRMGRQLIQAALALEGVQLGA   34 (162)
T ss_dssp             EEEEETTTTSHHHHHHHHHHHHSTTEECCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEE
Confidence            68999999999999999998876 567654

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=90.19  E-value=0.11  Score=40.21  Aligned_cols=31  Identities=23%  Similarity=0.240  Sum_probs=27.9

Q ss_pred             EEEEecCCchhHHHHHHHHHHCCCEEEEEecC
Q 025786           72 HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNL  103 (248)
Q Consensus        72 ~vlITGasg~IG~~la~~L~~~G~~V~~~~r~  103 (248)
                      .|+|.|| |-.|..+|..|.++|++|.++++.
T Consensus         4 ~V~IvGa-Gp~Gl~~A~~L~~~G~~v~vlE~~   34 (292)
T d1k0ia1           4 QVAIIGA-GPSGLLLGQLLHKAGIDNVILERQ   34 (292)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHHTCCEEEECSS
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCCEEEEeCC
Confidence            5999985 699999999999999999999864

>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Dethiobiotin synthetase
species: Escherichia coli [TaxId: 562]

Probab=90.13  E-value=0.11  Score=38.18  Aligned_cols=31  Identities=19%  Similarity=0.192  Sum_probs=26.7

Q ss_pred             eEEEEecCCchhHH-----HHHHHHHHCCCEEEEEe
Q 025786           71 THVLVTGGAGYIGS-----HAALRLLKDSYRVTIVD  101 (248)
Q Consensus        71 k~vlITGasg~IG~-----~la~~L~~~G~~V~~~~  101 (248)
                      |+++|||-..|+|+     .|+..|+++|++|.+++
T Consensus         2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~G~rVl~id   37 (224)
T d1byia_           2 KRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYK   37 (224)
T ss_dssp             EEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred             ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEC
Confidence            89999997779997     46688899999999986

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=90.13  E-value=0.19  Score=31.22  Aligned_cols=32  Identities=22%  Similarity=0.076  Sum_probs=29.2

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEec
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDN  102 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r  102 (248)
                      ||+|.|.| +|-+|+-++.+-..-|++|++++-
T Consensus         1 ~k~vgIlG-~GQLgrMl~~Aa~~LG~~v~vldp   32 (78)
T d3etja2           1 MKQVCVLG-NGQLGRMLRQAGEPLGIAVWPVGL   32 (78)
T ss_dssp             CEEEEEEB-CSHHHHHHHHHHGGGTEEEEEECT
T ss_pred             CCEEEEEc-CCHHHHHHHHHHHHcCCEEEEEcC
Confidence            58999998 699999999999999999999874

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=89.77  E-value=0.87  Score=32.91  Aligned_cols=33  Identities=18%  Similarity=0.106  Sum_probs=29.3

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecC
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNL  103 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~  103 (248)
                      .+++.|.| .|.||+.+++.+..-|.+|+..++.
T Consensus        44 ~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~   76 (188)
T d1sc6a1          44 GKKLGIIG-YGHIGTQLGILAESLGMYVYFYDIE   76 (188)
T ss_dssp             TCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             ceEEEEee-cccchhhhhhhcccccceEeecccc
Confidence            38899986 8999999999999999999998753

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=89.67  E-value=0.17  Score=38.82  Aligned_cols=30  Identities=37%  Similarity=0.609  Sum_probs=27.0

Q ss_pred             EEEecCCchhHHHHHHHHHHCCCEEEEEecC
Q 025786           73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNL  103 (248)
Q Consensus        73 vlITGasg~IG~~la~~L~~~G~~V~~~~r~  103 (248)
                      |+|.| +|-.|..+|.+|+++|++|+++++.
T Consensus         6 vvIIG-aGi~Gls~A~~La~~G~~V~viE~~   35 (281)
T d2gf3a1           6 VIVVG-AGSMGMAAGYQLAKQGVKTLLVDAF   35 (281)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCcEEEEeCC
Confidence            77887 5999999999999999999999864

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Peptidoglycan biosynthesis glycosyltransferase MurG
domain: Peptidoglycan biosynthesis glycosyltransferase MurG
species: Escherichia coli [TaxId: 562]

Probab=89.63  E-value=0.16  Score=39.95  Aligned_cols=31  Identities=23%  Similarity=0.407  Sum_probs=22.0

Q ss_pred             eEEEEec-CCchh---HHHHHHHHHHCCCEEEEEe
Q 025786           71 THVLVTG-GAGYI---GSHAALRLLKDSYRVTIVD  101 (248)
Q Consensus        71 k~vlITG-asg~I---G~~la~~L~~~G~~V~~~~  101 (248)
                      |+|+|++ ||||-   ..+++++|.++|++|..++
T Consensus         1 kkili~~~GtGGHv~~a~al~~~L~~~G~eV~~i~   35 (351)
T d1f0ka_           1 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLG   35 (351)
T ss_dssp             CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEE
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHHHHhCCCEEEEEE
Confidence            4555554 55433   4568899999999998876

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=89.61  E-value=0.16  Score=37.18  Aligned_cols=31  Identities=39%  Similarity=0.568  Sum_probs=24.8

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNL  103 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~  103 (248)
                      |+|.|.| .|++|..++..| ++|++|++.|.+
T Consensus         1 MkI~ViG-lG~vGl~~a~~~-a~g~~V~g~Din   31 (196)
T d1dlja2           1 MKIAVAG-SGYVGLSLGVLL-SLQNEVTIVDIL   31 (196)
T ss_dssp             CEEEEEC-CSHHHHHHHHHH-TTTSEEEEECSC
T ss_pred             CEEEEEC-CChhHHHHHHHH-HCCCcEEEEECC
Confidence            3566666 899999999766 579999999854

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=89.58  E-value=1.1  Score=33.79  Aligned_cols=30  Identities=33%  Similarity=0.420  Sum_probs=26.2

Q ss_pred             eEEEEecCCchhHHHHHHHHHH-CCCEEEEEe
Q 025786           71 THVLVTGGAGYIGSHAALRLLK-DSYRVTIVD  101 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~-~G~~V~~~~  101 (248)
                      ++|+|-| .|-+|+++++.|.+ .|++|+.++
T Consensus        32 ~~vaIqG-~GnVG~~~a~~L~~e~Ga~vv~vs   62 (234)
T d1b26a1          32 ATVAVQG-FGNVGQFAALLISQELGSKVVAVS   62 (234)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHHCCEEEEEE
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHhcCCceEEee
Confidence            8888886 89999999999975 599998775

>d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: Amyloid beta precursor protein-binding protein 1, APPBP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.29  E-value=0.73  Score=39.17  Aligned_cols=31  Identities=23%  Similarity=0.310  Sum_probs=27.4

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC-EEEEEec
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDN  102 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~-~V~~~~r  102 (248)
                      .+|+|.|+ |++|.++++.|+..|. +++++|.
T Consensus        26 s~VlvvG~-gglG~Ei~knLvl~GVg~itivD~   57 (529)
T d1yova1          26 AHVCLINA-TATGTEILKNLVLPGIGSFTIIDG   57 (529)
T ss_dssp             CEEEECCC-SHHHHHHHHHHHTTTCSEEEEECC
T ss_pred             CCEEEECC-CHHHHHHHHHHHHhcCCEEEEEcC
Confidence            68999985 8999999999999996 7888874

>d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein PH1915, middle and C-terminal domains
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=88.75  E-value=0.95  Score=35.76  Aligned_cols=77  Identities=22%  Similarity=0.145  Sum_probs=44.8

Q ss_pred             eEEEEec-CCchhHHHHHHHHHHCCC-EEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-CCCC
Q 025786           71 THVLVTG-GAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-NAFD  147 (248)
Q Consensus        71 k~vlITG-asg~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-~~iD  147 (248)
                      ++||=.| ++|+.+.+++    ..|+ +|+.+|.++...+.+.+..+.. ....++.++..|+.+  .+..+... .++|
T Consensus       147 ~~VLDl~~g~G~~si~~a----~~ga~~V~~vD~s~~al~~a~~N~~~n-gl~~~~~~~~~d~~~--~~~~~~~~~~~fD  219 (324)
T d2as0a2         147 DRVLDVFTYTGGFAIHAA----IAGADEVIGIDKSPRAIETAKENAKLN-GVEDRMKFIVGSAFE--EMEKLQKKGEKFD  219 (324)
T ss_dssp             CEEEETTCTTTHHHHHHH----HTTCSEEEEEESCHHHHHHHHHHHHHT-TCGGGEEEEESCHHH--HHHHHHHTTCCEE
T ss_pred             CeeecccCcccchhhhhh----hcCCcEEEeecCCHHHHHHHHHHHHHc-CCCccceeeechhhh--hhHHHHhccCCCC
Confidence            6777666 4566666543    4565 7999986544333333332221 223467888888753  33333333 4799


Q ss_pred             EEEEccc
Q 025786          148 AVMHFAA  154 (248)
Q Consensus       148 ~li~~Ag  154 (248)
                      +||.+.-
T Consensus       220 ~Vi~DpP  226 (324)
T d2as0a2         220 IVVLDPP  226 (324)
T ss_dssp             EEEECCC
T ss_pred             chhcCCc
Confidence            9997753

>d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Probable oxidoreductase At4g09670
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=88.64  E-value=1.2  Score=31.65  Aligned_cols=72  Identities=13%  Similarity=0.082  Sum_probs=41.2

Q ss_pred             eEEEEecCCchhHHHHHHHHHHC-CCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKD-SYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~l  149 (248)
                      .++.|.| +|.+|+..++.|... +.+|+.++-  +..+.+.+..++. ..+....+       .++++++++...+|+|
T Consensus         2 iki~iIG-~G~~g~~~~~~l~~~~~~~i~ai~d--~~~~~~~~~~~~~-~~~~~~~~-------~~~~~~ll~~~~iD~v   70 (184)
T d1ydwa1           2 IRIGVMG-CADIARKVSRAIHLAPNATISGVAS--RSLEKAKAFATAN-NYPESTKI-------HGSYESLLEDPEIDAL   70 (184)
T ss_dssp             EEEEEES-CCTTHHHHHHHHHHCTTEEEEEEEC--SSHHHHHHHHHHT-TCCTTCEE-------ESSHHHHHHCTTCCEE
T ss_pred             eEEEEEc-CCHHHHHHHHHHHhCCCCEEEEEEe--CCccccccchhcc-ccccceee-------cCcHHHhhhcccccee
Confidence            4678888 588999999988775 668876531  2222222222222 11222222       1345566666678998


Q ss_pred             EEcc
Q 025786          150 MHFA  153 (248)
Q Consensus       150 i~~A  153 (248)
                      +-+.
T Consensus        71 ~I~t   74 (184)
T d1ydwa1          71 YVPL   74 (184)
T ss_dssp             EECC
T ss_pred             eecc
Confidence            8553

>d1jyea_ c.93.1.1 (A:) Lac-repressor (lacR) core (C-terminal domain) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Periplasmic binding protein-like I
superfamily: Periplasmic binding protein-like I
family: L-arabinose binding protein-like
domain: Lac-repressor (lacR) core (C-terminal domain)
species: Escherichia coli [TaxId: 562]

Probab=88.55  E-value=2.5  Score=31.77  Aligned_cols=111  Identities=12%  Similarity=-0.021  Sum_probs=58.0

Q ss_pred             chhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEEEcccccccC
Q 025786           80 GYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVG  159 (248)
Q Consensus        80 g~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li~~Ag~~~~~  159 (248)
                      +-+-..+-+++.+.|++|.+..-.....+...+.++.+.....+..++..+..+.+.+...+.+.++=+|+....  ...
T Consensus        16 ~~i~~~i~~~a~~~Gy~v~v~~~~~~~~~~~~~~l~~l~~~~vdgiIl~~~~~~~~~~~~~~~~~~iPvV~~d~~--~~~   93 (271)
T d1jyea_          16 SQIVAAILSRADQLGASVVVSMVERSGVEACKTAVHNLLAQRVSGLIINYPLDDQDAIAVEAACTNVPALFLDVS--DQT   93 (271)
T ss_dssp             HHHHHHHHHHHHHTTCEEEEEECCSSSHHHHHHHHHHHHTTTCSCEEEESCCCHHHHHHHHHHTTTSCEEESSSC--TTS
T ss_pred             HHHHHHHHHHHHHcCCEEEEEECCCCCHHHHHHHHHHHHhcCCCEEEeccccCchhHHHHHHHhcCCCeeeeecc--ccc
Confidence            345667778888999999876522222222333344443322333344445544444444444444555554321  111


Q ss_pred             CCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEecc
Q 025786          160 ESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSST  196 (248)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS  196 (248)
                          ........+......+.+.+.+.|.++|.++++
T Consensus        94 ----~~~~V~~D~~~~~~~~~~~L~~~G~~~i~~i~~  126 (271)
T d1jyea_          94 ----PINSIIFSHEDGTRLGVEHLVALGHQQIALLAG  126 (271)
T ss_dssp             ----SSCEEEECHHHHHHHHHHHHHHHTCCSEEEEEC
T ss_pred             ----cCCccccchhhccccceeeeecccccccccccc
Confidence                111122244455666777788888888888864

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=88.49  E-value=0.2  Score=35.94  Aligned_cols=76  Identities=14%  Similarity=-0.039  Sum_probs=43.1

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhc----------CCCCceEEEEccCCCHHHHHHH
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELF----------PEPGRLQFIYADLGDAKAVNKF  140 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~----------~~~~~~~~~~~Dl~~~~~~~~~  140 (248)
                      ++||..|+..|  + .+..|+++|++|+++|.+....+.+.+..++..          .......++.+|..+...... 
T Consensus        22 ~rvLd~GCG~G--~-~a~~la~~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~-   97 (201)
T d1pjza_          22 ARVLVPLCGKS--Q-DMSWLSGQGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTARDI-   97 (201)
T ss_dssp             CEEEETTTCCS--H-HHHHHHHHCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHHHH-
T ss_pred             CEEEEecCcCC--H-HHHHHHHcCCceEeecccHHHHHHHHHHhccccchhhhhhhhhccccccceecccccccccccc-
Confidence            79999995544  3 566888899999999965433322222221110          012345677777766433221 


Q ss_pred             hhcCCCCEEEEcc
Q 025786          141 FSENAFDAVMHFA  153 (248)
Q Consensus       141 ~~~~~iD~li~~A  153 (248)
                         ...|.|+-..
T Consensus        98 ---~~~D~i~~~~  107 (201)
T d1pjza_          98 ---GHCAAFYDRA  107 (201)
T ss_dssp             ---HSEEEEEEES
T ss_pred             ---cceeEEEEEe
Confidence               1457776543

>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Arsenite-translocating ATPase ArsA
species: Escherichia coli [TaxId: 562]

Probab=88.37  E-value=0.21  Score=38.42  Aligned_cols=34  Identities=21%  Similarity=0.356  Sum_probs=28.8

Q ss_pred             eEEEEecCCchhHHHH-----HHHHHHCCCEEEEEecCC
Q 025786           71 THVLVTGGAGYIGSHA-----ALRLLKDSYRVTIVDNLS  104 (248)
Q Consensus        71 k~vlITGasg~IG~~l-----a~~L~~~G~~V~~~~r~~  104 (248)
                      ++|+|+.|-||+|+-+     +..|+++|++|.++|-.+
T Consensus        20 ~~iii~sGKGGVGKTT~a~nLA~~lA~~G~rVllvD~Dp   58 (279)
T d1ihua2          20 HGLIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSDP   58 (279)
T ss_dssp             CEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESCC
T ss_pred             CEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            6777887799999976     688999999999998653

>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=88.27  E-value=0.33  Score=38.36  Aligned_cols=35  Identities=26%  Similarity=0.377  Sum_probs=28.9

Q ss_pred             CceEEEEecCCchhHHHHHHHHHHCC--CEEEEEecCC
Q 025786           69 GVTHVLVTGGAGYIGSHAALRLLKDS--YRVTIVDNLS  104 (248)
Q Consensus        69 ~~k~vlITGasg~IG~~la~~L~~~G--~~V~~~~r~~  104 (248)
                      .||+|+|.| +|.-|..+|..|+++|  ++|++..+..
T Consensus         3 ~~KrVaIIG-aG~sGl~~A~~L~~~~~~~~v~vfEk~~   39 (335)
T d2gv8a1           3 TIRKIAIIG-AGPSGLVTAKALLAEKAFDQVTLFERRG   39 (335)
T ss_dssp             SCCEEEEEC-CSHHHHHHHHHHHTTTCCSEEEEECSSS
T ss_pred             CCCeEEEEC-cCHHHHHHHHHHHHhCCCCCEEEEECCC
Confidence            468999998 5888999999998877  5999987653

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=88.18  E-value=0.23  Score=38.56  Aligned_cols=31  Identities=26%  Similarity=0.590  Sum_probs=27.1

Q ss_pred             EEEEecCCchhHHHHHHHHHHCCC-EEEEEecC
Q 025786           72 HVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNL  103 (248)
Q Consensus        72 ~vlITGasg~IG~~la~~L~~~G~-~V~~~~r~  103 (248)
                      .|+|.| +|-+|..+|..|+++|. +|+++++.
T Consensus         3 dViIIG-aGi~G~s~A~~La~~G~~~V~liE~~   34 (305)
T d1pj5a2           3 RIVIIG-AGIVGTNLADELVTRGWNNITVLDQG   34 (305)
T ss_dssp             CEEEEC-CSHHHHHHHHHHHHTTCCCEEEECSS
T ss_pred             CEEEEC-cCHHHHHHHHHHHHcCCCcEEEEeCC
Confidence            588888 58999999999999996 69999875

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=88.04  E-value=0.26  Score=35.29  Aligned_cols=78  Identities=18%  Similarity=0.242  Sum_probs=37.5

Q ss_pred             eEEEEecCCchhHHH-HHHHHHHC-----CCEEEEEecCCCCcchhhhhhhhhcC-CCCceEEEEccCCCHHHHHHHhhc
Q 025786           71 THVLVTGGAGYIGSH-AALRLLKD-----SYRVTIVDNLSRGNIGAVKVLQELFP-EPGRLQFIYADLGDAKAVNKFFSE  143 (248)
Q Consensus        71 k~vlITGasg~IG~~-la~~L~~~-----G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~  143 (248)
                      .+|.|.||++ +|.. ++..++.+     +.+|+++|....+.+...+.++.... ..........  +|   ..+.++ 
T Consensus         4 ~KI~iIGaGs-v~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~~--~d---~~eal~-   76 (167)
T d1u8xx1           4 FSIVIAGGGS-TFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAAT--TD---PEEAFT-   76 (167)
T ss_dssp             EEEEEECTTS-SSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEE--SC---HHHHHS-
T ss_pred             ceEEEECCCh-hhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceEec--CC---hhhccC-
Confidence            4677778744 4443 33444432     24899998644332221222222110 0112222211  12   234444 


Q ss_pred             CCCCEEEEccccc
Q 025786          144 NAFDAVMHFAAVA  156 (248)
Q Consensus       144 ~~iD~li~~Ag~~  156 (248)
                       +.|+||+.||..
T Consensus        77 -~AD~Vvitag~~   88 (167)
T d1u8xx1          77 -DVDFVMAHIRVG   88 (167)
T ss_dssp             -SCSEEEECCCTT
T ss_pred             -CCCEEEECCCcC
Confidence             679999999874

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=87.88  E-value=0.28  Score=34.86  Aligned_cols=31  Identities=23%  Similarity=0.343  Sum_probs=26.1

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEec
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDN  102 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r  102 (248)
                      ++|+|.| +|.+|.+++..|.+.|++|.++.+
T Consensus         4 ~~VvIIG-gG~~G~e~A~~l~~~g~~v~v~~~   34 (185)
T d1q1ra1           4 DNVVIVG-TGLAGVEVAFGLRASGWEGNIRLV   34 (185)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCCSEEEEE
T ss_pred             CCEEEEC-CcHHHHHHHHHHHHcCCceEEEEe
Confidence            7888888 599999999999999987665543

>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=87.77  E-value=0.12  Score=37.24  Aligned_cols=78  Identities=17%  Similarity=0.137  Sum_probs=40.3

Q ss_pred             eEEEEecCCchhHHH--HHHHHHHC----CCEEEEEecCCCCcchhhhhhhhhc-CCCCceEEEEccCCCHHHHHHHhhc
Q 025786           71 THVLVTGGAGYIGSH--AALRLLKD----SYRVTIVDNLSRGNIGAVKVLQELF-PEPGRLQFIYADLGDAKAVNKFFSE  143 (248)
Q Consensus        71 k~vlITGasg~IG~~--la~~L~~~----G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~  143 (248)
                      ++|.|.|| |.+|..  +...|+..    +.+++++|..+.+.+......+... ..+....+...  +|   .++.++ 
T Consensus         3 mKI~iIGa-Gsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~i~~~--td---~~eaL~-   75 (171)
T d1obba1           3 VKIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEKT--MN---LDDVII-   75 (171)
T ss_dssp             CEEEEETT-TCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEE--SC---HHHHHT-
T ss_pred             cEEEEECC-CHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCCeEEEEe--CC---hhhccc-
Confidence            57888885 777754  34444432    4599999965433222111122111 11222332221  23   334444 


Q ss_pred             CCCCEEEEccccc
Q 025786          144 NAFDAVMHFAAVA  156 (248)
Q Consensus       144 ~~iD~li~~Ag~~  156 (248)
                       +.|+||+.+++.
T Consensus        76 -dad~Vv~~~~~g   87 (171)
T d1obba1          76 -DADFVINTAMVG   87 (171)
T ss_dssp             -TCSEEEECCCTT
T ss_pred             -CCCeEeeecccc
Confidence             689999998764

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=87.50  E-value=0.29  Score=36.14  Aligned_cols=31  Identities=35%  Similarity=0.489  Sum_probs=26.6

Q ss_pred             EEEEecCCchhHHHHHHHHHHCCC-EEEEEecC
Q 025786           72 HVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNL  103 (248)
Q Consensus        72 ~vlITGasg~IG~~la~~L~~~G~-~V~~~~r~  103 (248)
                      +|+|.| +|.-|...|..|.++|+ +|+++.+.
T Consensus         2 ~V~IIG-aG~aGL~aA~~L~~~G~~~V~vlE~~   33 (347)
T d1b5qa1           2 RVIVVG-AGMSGISAAKRLSEAGITDLLILEAT   33 (347)
T ss_dssp             CEEEEC-CBHHHHHHHHHHHHTTCCCEEEECSS
T ss_pred             CEEEEC-CcHHHHHHHHHHHhCCCCcEEEEECC
Confidence            578888 59999999999999996 69998764

>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=87.22  E-value=0.96  Score=29.69  Aligned_cols=33  Identities=21%  Similarity=0.191  Sum_probs=26.6

Q ss_pred             eEEEEecCCchhHHHHHHHHHH---CCCEEEEEecCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLK---DSYRVTIVDNLS  104 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~---~G~~V~~~~r~~  104 (248)
                      ++++|.| +|++|.++|..|.+   .|.+|.++.+.+
T Consensus        19 ~~v~IiG-gG~ig~E~A~~l~~~~~~g~~Vtli~~~~   54 (117)
T d1feca2          19 KRALCVG-GGYISIEFAGIFNAYKARGGQVDLAYRGD   54 (117)
T ss_dssp             SEEEEEC-SSHHHHHHHHHHHHHSCTTCEEEEEESSS
T ss_pred             CeEEEEC-CChHHHHHHHHhHhhcccccccceecccc
Confidence            7899998 59999999976554   488999988643

>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monoamine oxidase B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.21  E-value=0.34  Score=37.75  Aligned_cols=31  Identities=29%  Similarity=0.404  Sum_probs=26.9

Q ss_pred             EEEecCCchhHHHHHHHHHHCCCEEEEEecCC
Q 025786           73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (248)
Q Consensus        73 vlITGasg~IG~~la~~L~~~G~~V~~~~r~~  104 (248)
                      |+|.| +|.-|...|..|+++|++|+++.+..
T Consensus         2 ViVIG-aG~aGL~aA~~L~~~G~~V~VlE~~~   32 (383)
T d2v5za1           2 VVVVG-GGISGMAAAKLLHDSGLNVVVLEARD   32 (383)
T ss_dssp             EEEEC-CBHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred             EEEEC-CCHHHHHHHHHHHhCCCCEEEEecCC
Confidence            67787 58999999999999999999998543

>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=87.08  E-value=0.32  Score=36.10  Aligned_cols=32  Identities=22%  Similarity=0.301  Sum_probs=27.7

Q ss_pred             eEEEEecCCchhHHH-----HHHHHHHCCCEEEEEec
Q 025786           71 THVLVTGGAGYIGSH-----AALRLLKDSYRVTIVDN  102 (248)
Q Consensus        71 k~vlITGasg~IG~~-----la~~L~~~G~~V~~~~r  102 (248)
                      |+|.|+|+-||+|+.     ++..|+++|.+|.++|-
T Consensus         3 ~vIav~~~kGGvGKTtia~nLA~~la~~g~~VlliD~   39 (237)
T d1g3qa_           3 RIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDG   39 (237)
T ss_dssp             EEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred             eEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeC
Confidence            789999999999974     56778899999999984

>d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=86.56  E-value=0.18  Score=36.24  Aligned_cols=33  Identities=15%  Similarity=0.139  Sum_probs=21.2

Q ss_pred             eEEEEecC-CchhHHHHHHHHHHCC----CEEEEEecC
Q 025786           71 THVLVTGG-AGYIGSHAALRLLKDS----YRVTIVDNL  103 (248)
Q Consensus        71 k~vlITGa-sg~IG~~la~~L~~~G----~~V~~~~r~  103 (248)
                      ++|.|.|| +.+.+..++..+....    -+++++|..
T Consensus         2 ~KI~iIGaGs~~~~~~~~~l~~~~~~~~~~eI~L~Di~   39 (169)
T d1s6ya1           2 LKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIP   39 (169)
T ss_dssp             EEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCG
T ss_pred             cEEEEECCChhhHHHHHHHHHHhccccCCCEEEEEcCC
Confidence            46777775 5566666666555432    388888854

>d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Pyrococcus abyssi [TaxId: 29292]

Probab=86.09  E-value=0.4  Score=38.70  Aligned_cols=23  Identities=13%  Similarity=0.095  Sum_probs=19.0

Q ss_pred             CchhH---HHHHHHHHHCCCEEEEEe
Q 025786           79 AGYIG---SHAALRLLKDSYRVTIVD  101 (248)
Q Consensus        79 sg~IG---~~la~~L~~~G~~V~~~~  101 (248)
                      +||+|   .+|+++|+++||+|.++.
T Consensus        15 ~GG~~~~~~~La~~L~~~Gh~V~Vvt   40 (437)
T d2bisa1          15 VGGLAEALTAISEALASLGHEVLVFT   40 (437)
T ss_dssp             SSSHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred             cCCHHHHHHHHHHHHHHcCCEEEEEe
Confidence            47777   556899999999998875

>d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852 {Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein Ta0852
species: Thermoplasma acidophilum [TaxId: 2303]

Probab=86.05  E-value=0.59  Score=35.64  Aligned_cols=75  Identities=24%  Similarity=0.328  Sum_probs=48.2

Q ss_pred             ceEEEEec-CCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 025786           70 VTHVLVTG-GAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (248)
Q Consensus        70 ~k~vlITG-asg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~  148 (248)
                      +++||=.| |||.+..++++.+... .+|+.+++++...+.+.+.+++.. ...++.+...|+.+.      +.+..+|.
T Consensus        86 G~rVLEiG~GsG~lt~~la~~v~~~-g~V~~vD~~e~~~~~A~~n~~~~~-~~~nv~~~~~Di~~~------~~~~~fD~  157 (250)
T d1yb2a1          86 GMDILEVGVGSGNMSSYILYALNGK-GTLTVVERDEDNLKKAMDNLSEFY-DIGNVRTSRSDIADF------ISDQMYDA  157 (250)
T ss_dssp             TCEEEEECCTTSHHHHHHHHHHTTS-SEEEEECSCHHHHHHHHHHHHTTS-CCTTEEEECSCTTTC------CCSCCEEE
T ss_pred             cCEEEEeeeeCcHHHHHHHHHhCCC-cEEEEEECCHHHHHHHHHHHHHhc-CCCceEEEEeeeecc------cccceeee
Confidence            37888888 5577778888777554 489998865443333444443332 245788999998652      23346898


Q ss_pred             EEEc
Q 025786          149 VMHF  152 (248)
Q Consensus       149 li~~  152 (248)
                      |+.+
T Consensus       158 V~ld  161 (250)
T d1yb2a1         158 VIAD  161 (250)
T ss_dssp             EEEC
T ss_pred             eeec
Confidence            8754

>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Acetaldehyde dehydrogenase (acylating)
species: Pseudomonas sp. [TaxId: 306]

Probab=85.94  E-value=0.85  Score=32.05  Aligned_cols=30  Identities=20%  Similarity=0.253  Sum_probs=20.5

Q ss_pred             eEEEEecCCchhHHHHH-HHHHHC-CCEEEEEe
Q 025786           71 THVLVTGGAGYIGSHAA-LRLLKD-SYRVTIVD  101 (248)
Q Consensus        71 k~vlITGasg~IG~~la-~~L~~~-G~~V~~~~  101 (248)
                      .++.|.| +|+||..+. +.|... ..+++.+.
T Consensus         5 irvaIIG-aG~ig~~~~~~~l~~~~~~el~ava   36 (157)
T d1nvmb1           5 LKVAIIG-SGNIGTDLMIKVLRNAKYLEMGAMV   36 (157)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHHHCSSEEEEEEE
T ss_pred             cEEEEEc-CcHHHHHHHHHHHhhCCcceEEEEE
Confidence            5789999 999999755 444333 34676653

>d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=85.87  E-value=0.056  Score=40.51  Aligned_cols=26  Identities=38%  Similarity=0.469  Sum_probs=22.4

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRV   97 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V   97 (248)
                      |+|+|.| +|-+|..+|.+|+++|++|
T Consensus         1 mkV~VIG-aGi~GlstA~~L~~~G~~v   26 (246)
T d1kifa1           1 MRVVVIG-AGVIGLSTALCIHERYHSV   26 (246)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHHTTT
T ss_pred             CEEEEEC-chHHHHHHHHHHHHCCCCc
Confidence            4688888 5999999999999999754

>d2igta1 c.66.1.51 (A:1-309) Putative methyltransferase Atu0340 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Putative methyltransferase Atu0340
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=85.71  E-value=2.7  Score=32.87  Aligned_cols=77  Identities=18%  Similarity=0.073  Sum_probs=44.1

Q ss_pred             eEEEEe-cCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-CCCCE
Q 025786           71 THVLVT-GGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-NAFDA  148 (248)
Q Consensus        71 k~vlIT-Gasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-~~iD~  148 (248)
                      ++||=. .+||+++.+.    +..|++|+.+|.+....+.+.+..+.-.-...++.++..|+.+  -+++..+. .++|+
T Consensus       134 ~rVLdlf~~tG~~sl~a----a~~GA~V~~VD~s~~al~~a~~N~~ln~~~~~~~~~i~~D~~~--~l~~~~~~~~~fD~  207 (309)
T d2igta1         134 LKVLNLFGYTGVASLVA----AAAGAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMK--FIQREERRGSTYDI  207 (309)
T ss_dssp             CEEEEETCTTCHHHHHH----HHTTCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHH--HHHHHHHHTCCBSE
T ss_pred             CeEEEecCCCcHHHHHH----HhCCCeEEEEeChHHHHHHHHHhhhhhcccCCcEEEEeCCHHH--hHHHHhhcCCCCCE
Confidence            556544 4567666654    4579999999854333222333222211123468899988753  34444433 47899


Q ss_pred             EEEcc
Q 025786          149 VMHFA  153 (248)
Q Consensus       149 li~~A  153 (248)
                      ||..-
T Consensus       208 IilDP  212 (309)
T d2igta1         208 ILTDP  212 (309)
T ss_dssp             EEECC
T ss_pred             EEECC
Confidence            99763

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=85.33  E-value=1  Score=33.23  Aligned_cols=78  Identities=17%  Similarity=0.091  Sum_probs=44.9

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li  150 (248)
                      .+||-.|+..|--..+..++...+..|+.++.++...+.+.+.++...  -.++.++..|..+.     ....+.+|.|+
T Consensus        77 ~~VLdiG~GtG~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~~--~~n~~~~~~d~~~~-----~~~~~~fD~I~  149 (213)
T d1dl5a1          77 MRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLG--IENVIFVCGDGYYG-----VPEFSPYDVIF  149 (213)
T ss_dssp             CEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTT--CCSEEEEESCGGGC-----CGGGCCEEEEE
T ss_pred             ceEEEecCccchhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhhc--ccccccccCchHHc-----cccccchhhhh
Confidence            688888855444444444444455689998865443333344333321  34677777775431     12234689998


Q ss_pred             Ecccc
Q 025786          151 HFAAV  155 (248)
Q Consensus       151 ~~Ag~  155 (248)
                      .+++.
T Consensus       150 ~~~~~  154 (213)
T d1dl5a1         150 VTVGV  154 (213)
T ss_dssp             ECSBB
T ss_pred             hhccH
Confidence            87764

>d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=85.19  E-value=1.1  Score=32.13  Aligned_cols=31  Identities=29%  Similarity=0.433  Sum_probs=25.5

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCC-CEEEEEe
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDS-YRVTIVD  101 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G-~~V~~~~  101 (248)
                      |-+|.|-| .|-||+.+++.+.++. .+|+.+.
T Consensus         1 MIKVaING-fGRIGR~v~Ral~~~~dievVaIn   32 (178)
T d1b7go1           1 MVNVAVNG-YGTIGKRVADAIIKQPDMKLVGVA   32 (178)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHHTCTTEEEEEEE
T ss_pred             CeEEEEEC-CCHHHHHHHHHHHhCCCCEEEEEE
Confidence            45788888 8999999999999875 5777664

>d1n4wa1 c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of GMC family {Streptomyces sp. [TaxId: 1931]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Cholesterol oxidase of GMC family
species: Streptomyces sp. [TaxId: 1931]

Probab=84.98  E-value=0.44  Score=37.93  Aligned_cols=29  Identities=28%  Similarity=0.442  Sum_probs=26.3

Q ss_pred             EEEecCCchhHHHHHHHHHHCCCEEEEEec
Q 025786           73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDN  102 (248)
Q Consensus        73 vlITGasg~IG~~la~~L~~~G~~V~~~~r  102 (248)
                      |+|.| +|.-|..+|.+|+++|++|.++.+
T Consensus         5 VIVVG-sG~aG~v~A~rLaeaG~~VlvLEa   33 (367)
T d1n4wa1           5 AVVIG-TGYGAAVSALRLGEAGVQTLMLEM   33 (367)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEEES
T ss_pred             EEEeC-cCHHHHHHHHHHHHCcCeEEEEec
Confidence            67777 799999999999999999999975

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=84.84  E-value=0.53  Score=35.13  Aligned_cols=31  Identities=29%  Similarity=0.392  Sum_probs=27.1

Q ss_pred             EEEecCCchhHHHHHHHHHHCCCEEEEEecCC
Q 025786           73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (248)
Q Consensus        73 vlITGasg~IG~~la~~L~~~G~~V~~~~r~~  104 (248)
                      |+|.| +|-.|...|..|+++|++|+++++..
T Consensus         5 ViIIG-aG~aGl~aA~~la~~G~~V~liEk~~   35 (251)
T d2i0za1           5 VIVIG-GGPSGLMAAIGAAEEGANVLLLDKGN   35 (251)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            77888 58999999999999999999998643

>d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Apoptosis-inducing factor (AIF)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.69  E-value=0.63  Score=31.71  Aligned_cols=33  Identities=21%  Similarity=0.232  Sum_probs=26.8

Q ss_pred             eEEEEecCCchhHHHHHHHHH----HCCCEEEEEecCC
Q 025786           71 THVLVTGGAGYIGSHAALRLL----KDSYRVTIVDNLS  104 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~----~~G~~V~~~~r~~  104 (248)
                      ++++|.| +|++|.+++..|.    +.|.+|+++.+..
T Consensus        38 k~i~IvG-gG~~G~E~A~~l~~~~~~~g~~Vt~i~~~~   74 (137)
T d1m6ia2          38 KSITIIG-GGFLGSELACALGRKARALGTEVIQLFPEK   74 (137)
T ss_dssp             SEEEEEC-CSHHHHHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHHHHhcCCEEEEecccc
Confidence            6888887 4999999999885    3589999987543

>d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=84.59  E-value=0.48  Score=39.31  Aligned_cols=32  Identities=13%  Similarity=0.149  Sum_probs=24.4

Q ss_pred             ceEEEEecC------CchhH---HHHHHHHHHCCCEEEEEe
Q 025786           70 VTHVLVTGG------AGYIG---SHAALRLLKDSYRVTIVD  101 (248)
Q Consensus        70 ~k~vlITGa------sg~IG---~~la~~L~~~G~~V~~~~  101 (248)
                      ||.+.||.-      +||+|   .+|+++|+++|++|.++.
T Consensus         1 M~i~~v~~e~~P~~~~GGl~~vv~~La~~L~~~Gh~V~Vi~   41 (477)
T d1rzua_           1 MNVLSVSSEIYPLIKTGGLADVVGALPIALEAHGVRTRTLI   41 (477)
T ss_dssp             CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEE
T ss_pred             CEEEEEEEeeecccccCcHHHHHHHHHHHHHHcCCeEEEEe
Confidence            465666642      58888   567899999999998873

>d1xhca1 c.3.1.5 (A:1-103,A:226-289) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=84.50  E-value=0.66  Score=32.26  Aligned_cols=31  Identities=32%  Similarity=0.503  Sum_probs=25.4

Q ss_pred             EEEEecCCchhHHHHHHHHHHCCCEEEEEecCC
Q 025786           72 HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (248)
Q Consensus        72 ~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~  104 (248)
                      +|+|.| +|.+|.++|..|. ++.+|+++++.+
T Consensus         2 rVvIIG-gG~~G~e~A~~l~-~~~~Vtvv~~~~   32 (167)
T d1xhca1           2 KVVIVG-NGPGGFELAKQLS-QTYEVTVIDKEP   32 (167)
T ss_dssp             EEEEEC-CSHHHHHHHHHHT-TTSEEEEECSSS
T ss_pred             eEEEEC-CcHHHHHHHHHHH-cCCCEEEEeccc
Confidence            678887 5899999999985 578999998643

>d1xk7a1 c.123.1.1 (A:4-405) Crotonobetainyl-CoA:carnitine CoA-transferase, CaiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: CoA-transferase family III (CaiB/BaiF)
superfamily: CoA-transferase family III (CaiB/BaiF)
family: CoA-transferase family III (CaiB/BaiF)
domain: Crotonobetainyl-CoA:carnitine CoA-transferase, CaiB
species: Escherichia coli [TaxId: 562]

Probab=84.47  E-value=3.1  Score=33.40  Aligned_cols=83  Identities=12%  Similarity=0.054  Sum_probs=50.5

Q ss_pred             CCCCCCceEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhh--hhhhhcCCCCceEEEEccCCCHHHH---H
Q 025786           64 SQHEEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVK--VLQELFPEPGRLQFIYADLGDAKAV---N  138 (248)
Q Consensus        64 ~~~~~~~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~--~~~~~~~~~~~~~~~~~Dl~~~~~~---~  138 (248)
                      ..++.|.+++=++  ...-|-..++.|++.|++|+=+.+.... +....  ......  ..+-..+.+|+.+++..   .
T Consensus         6 ~gPL~GirVld~~--~~~agp~~~~~Lad~GAeVIkvE~p~~g-d~~r~~~~~~~~~--n~~K~si~ldl~~~~G~~~~~   80 (402)
T d1xk7a1           6 FGPLAGLRVVFSG--IEIAGPFAGQMFAEWGAEVIWIENVAWA-DTIRVQPNYPQLS--RRNLHALSLNIFKDEGREAFL   80 (402)
T ss_dssp             CSTTTTCEEEEEC--CSSHHHHHHHHHHHTTCEEEEEECSSSC-CGGGGSSSHHHHH--TTTCEEEEECTTSHHHHHHHH
T ss_pred             CcCCCCCEEEEeC--ChhHHHHHHHHHHHhCCeEEEECCCCCC-CccccCCchhHHh--CCCCeEEEEeCcCHHHHHHHH
Confidence            3456675555554  3445888889999999999988642211 11100  001111  22345688999988764   4


Q ss_pred             HHhhcCCCCEEEEcc
Q 025786          139 KFFSENAFDAVMHFA  153 (248)
Q Consensus       139 ~~~~~~~iD~li~~A  153 (248)
                      ++++  +.|+||+|-
T Consensus        81 ~Lv~--~aDv~i~n~   93 (402)
T d1xk7a1          81 KLME--TTDIFIEAS   93 (402)
T ss_dssp             HHHT--TCSEEEEEC
T ss_pred             HHHh--hcCCceeee
Confidence            5554  789999984

>d2afhe1 c.37.1.10 (E:1-289) Nitrogenase iron protein {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Nitrogenase iron protein
species: Azotobacter vinelandii [TaxId: 354]

Probab=84.45  E-value=0.4  Score=37.07  Aligned_cols=34  Identities=24%  Similarity=0.256  Sum_probs=28.3

Q ss_pred             ceEEEEecCCchhHHH-----HHHHHHHCCCEEEEEecCC
Q 025786           70 VTHVLVTGGAGYIGSH-----AALRLLKDSYRVTIVDNLS  104 (248)
Q Consensus        70 ~k~vlITGasg~IG~~-----la~~L~~~G~~V~~~~r~~  104 (248)
                      |++|.|.| =||+|+-     ++..|+++|++|.++|-.+
T Consensus         2 Mr~Iaisg-KGGVGKTT~a~NLA~~LA~~G~rVLlID~Dp   40 (289)
T d2afhe1           2 MRQCAIYG-KGGIGKSTTTQNLVAALAEMGKKVMIVGCDP   40 (289)
T ss_dssp             CEEEEEEE-CTTSSHHHHHHHHHHHHHHTTCCEEEEEECS
T ss_pred             ccEEEEEC-CCCCCHHHHHHHHHHHHHHCCCCEEEEecCC
Confidence            68899987 8999986     5788999999999998543

>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=84.35  E-value=0.51  Score=36.53  Aligned_cols=30  Identities=27%  Similarity=0.422  Sum_probs=27.2

Q ss_pred             EEEecCCchhHHHHHHHHHHCCCEEEEEecC
Q 025786           73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNL  103 (248)
Q Consensus        73 vlITGasg~IG~~la~~L~~~G~~V~~~~r~  103 (248)
                      |+|.| +|..|...|..|+++|++|+++.+.
T Consensus        19 VlVIG-~G~aGl~aA~~la~~G~~V~lvEK~   48 (308)
T d1y0pa2          19 VVVVG-SGGAGFSAAISATDSGAKVILIEKE   48 (308)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCcEEEEecC
Confidence            88888 6999999999999999999999864

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=83.96  E-value=4.2  Score=31.69  Aligned_cols=76  Identities=21%  Similarity=0.098  Sum_probs=44.9

Q ss_pred             eEEEEec-CCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-CCCCE
Q 025786           71 THVLVTG-GAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-NAFDA  148 (248)
Q Consensus        71 k~vlITG-asg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-~~iD~  148 (248)
                      ++||=.+ ++|+.+.+++    ..+.+|+.+|.+....+.+.+..+.. . -.++.++.+|..+.  ++.+.+. .++|+
T Consensus       147 ~rVLDl~~gtG~~s~~~a----~g~~~V~~vD~s~~al~~a~~n~~~n-g-l~~~~~i~~d~~~~--~~~~~~~~~~fD~  218 (318)
T d1wxxa2         147 ERALDVFSYAGGFALHLA----LGFREVVAVDSSAEALRRAEENARLN-G-LGNVRVLEANAFDL--LRRLEKEGERFDL  218 (318)
T ss_dssp             EEEEEETCTTTHHHHHHH----HHEEEEEEEESCHHHHHHHHHHHHHT-T-CTTEEEEESCHHHH--HHHHHHTTCCEEE
T ss_pred             CeeeccCCCCcHHHHHHH----hcCCcEEeecchHHHHHHHHHHHHHc-C-CCCcceeeccHHHH--hhhhHhhhcCCCE
Confidence            6776555 5677765543    34679999996554433333333322 1 23688899887543  2233222 47999


Q ss_pred             EEEccc
Q 025786          149 VMHFAA  154 (248)
Q Consensus       149 li~~Ag  154 (248)
                      ||.+.-
T Consensus       219 Vi~DpP  224 (318)
T d1wxxa2         219 VVLDPP  224 (318)
T ss_dssp             EEECCC
T ss_pred             EEEcCC
Confidence            998754

>d2csua3 c.23.4.1 (A:291-453) Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Succinyl-CoA synthetase domains
family: Succinyl-CoA synthetase domains
domain: Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=83.73  E-value=5.1  Score=27.61  Aligned_cols=76  Identities=14%  Similarity=0.154  Sum_probs=45.5

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCC---CHHHHHHHh----hc
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG---DAKAVNKFF----SE  143 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~---~~~~~~~~~----~~  143 (248)
                      +++.|.+.+||.|--++..+.+.|-++--.      .++..+.+++..+.... .-=.+|++   +.+.+.+++    ++
T Consensus         4 ~rvaiit~sGG~~~l~aD~~~~~Gl~l~~l------~~~t~~~L~~~lp~~~~-~~NPlD~~~~~~~~~~~~~l~~~~~d   76 (163)
T d2csua3           4 NKVAIMTNAGGPGVLTADELDKRGLKLATL------EEKTIEELRSFLPPMAA-VKNPVDMIASARGEDYYRTAKLLLQD   76 (163)
T ss_dssp             SEEEEEESCHHHHHHHHHHHHTTTCEECCC------CHHHHHHHHHHSCTTCE-ESSEEECCTTCCHHHHHHHHHHHHHS
T ss_pred             CeEEEEECChHHHHHHHHHHHHcCCccCCC------CHHHHHHHHHhCCCccc-CCCcccccCCCCHHHHHHHHHHHHcC
Confidence            778888889999999999999999877432      23344445554332110 00123332   444444444    44


Q ss_pred             CCCCEEEEcc
Q 025786          144 NAFDAVMHFA  153 (248)
Q Consensus       144 ~~iD~li~~A  153 (248)
                      ..+|.|+...
T Consensus        77 ~~vd~v~v~~   86 (163)
T d2csua3          77 PNVDMLIAIC   86 (163)
T ss_dssp             TTCSEEEEEE
T ss_pred             CCcCEEEEee
Confidence            6789876544

>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monooxygenase PhzS
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=83.15  E-value=0.91  Score=34.00  Aligned_cols=33  Identities=33%  Similarity=0.521  Sum_probs=27.8

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCC-EEEEEecCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLS  104 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~-~V~~~~r~~  104 (248)
                      .+|+|.| +|.-|..+|..|.+.|. +|.++.+.+
T Consensus         2 ~~V~IvG-aG~aGl~~A~~L~~~Gi~~V~V~Er~~   35 (288)
T d3c96a1           2 IDILIAG-AGIGGLSCALALHQAGIGKVTLLESSS   35 (288)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCSEEEEEESSS
T ss_pred             CEEEEEC-cCHHHHHHHHHHHhCCCCeEEEEeCCC
Confidence            4688888 59999999999999995 888887643

>d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=83.01  E-value=0.82  Score=32.91  Aligned_cols=32  Identities=22%  Similarity=0.179  Sum_probs=25.7

Q ss_pred             eEEEEecCCchhHHHHHHHHHHC--CCEEEEEecC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKD--SYRVTIVDNL  103 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~--G~~V~~~~r~  103 (248)
                      |+|+|.|| |++|.++|..|.+.  +.+|+++.|.
T Consensus         1 ~KVvIIGg-G~~G~e~A~~l~~~~~~~~V~v~~~~   34 (198)
T d1nhpa1           1 MKVIVLGS-SHGGYEAVEELLNLHPDAEIQWYEKG   34 (198)
T ss_dssp             CEEEEECS-SHHHHHHHHHHHHHCTTSEEEEEESS
T ss_pred             CEEEEECC-cHHHHHHHHHHHhcCCCCeEEEEeCC
Confidence            46888884 79999999999886  4578888764

>d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Thermotoga maritima [TaxId: 2336]

Probab=82.83  E-value=0.75  Score=32.45  Aligned_cols=76  Identities=13%  Similarity=0.059  Sum_probs=37.6

Q ss_pred             eEEEEecCCchhHHHHHHH-HHH-C----CCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcC
Q 025786           71 THVLVTGGAGYIGSHAALR-LLK-D----SYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSEN  144 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~-L~~-~----G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~  144 (248)
                      |+|.|.||. .+|...+-. |+. .    +.++++.|....+.+...+..+........+.   .. ++.   .+.++  
T Consensus         1 mKIaiIGaG-s~g~~~~~~~l~~~~~~~~~~el~L~Did~~k~~~~~d~~~~~~~~~~~~~---~t-~~~---~~~l~--   70 (162)
T d1up7a1           1 MRIAVIGGG-SSYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVKDRFKVL---IS-DTF---EGAVV--   70 (162)
T ss_dssp             CEEEEETTT-CTTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHHHHHHHHTTSSEEE---EC-SSH---HHHHT--
T ss_pred             CEEEEECCC-HHHHHHHHHHHHhcccccCccEEEEEecCcHHHHHHHHHHHhhhccCceEE---Ee-cCc---ccccC--
Confidence            357888874 366555532 222 1    35899998654333222222222222222221   11 121   23333  


Q ss_pred             CCCEEEEccccc
Q 025786          145 AFDAVMHFAAVA  156 (248)
Q Consensus       145 ~iD~li~~Ag~~  156 (248)
                      +.|+||..|+..
T Consensus        71 ~aDvVVita~~~   82 (162)
T d1up7a1          71 DAKYVIFQFRPG   82 (162)
T ss_dssp             TCSEEEECCCTT
T ss_pred             CCCEEEEecccC
Confidence            679999999864

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=82.82  E-value=1.4  Score=32.53  Aligned_cols=77  Identities=13%  Similarity=0.128  Sum_probs=47.6

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li  150 (248)
                      .+||..|+.+|--.++...|.  |.+|+.+++...-.+.+.+.+++..  -.++.++.+|..+-     .......|.|+
T Consensus        80 ~~VLeIGsGsGY~taila~l~--g~~V~~ie~~~~l~~~a~~~l~~~g--~~nv~~~~gd~~~g-----~~~~~pfD~Ii  150 (215)
T d1jg1a_          80 MNILEVGTGSGWNAALISEIV--KTDVYTIERIPELVEFAKRNLERAG--VKNVHVILGDGSKG-----FPPKAPYDVII  150 (215)
T ss_dssp             CCEEEECCTTSHHHHHHHHHH--CSCEEEEESCHHHHHHHHHHHHHTT--CCSEEEEESCGGGC-----CGGGCCEEEEE
T ss_pred             ceEEEecCCCChhHHHHHHhh--CceeEEEeccHHHHHHHHHHHHHcC--CceeEEEECccccC-----CcccCcceeEE
Confidence            688888866555556666665  4568888754332333334444432  35789999997531     12235789998


Q ss_pred             Eccccc
Q 025786          151 HFAAVA  156 (248)
Q Consensus       151 ~~Ag~~  156 (248)
                      -++++.
T Consensus       151 v~~a~~  156 (215)
T d1jg1a_         151 VTAGAP  156 (215)
T ss_dssp             ECSBBS
T ss_pred             eecccc
Confidence            877753

>d2bw0a2 c.65.1.1 (A:1-203) 10-formyltetrahydrofolate dehydrogenase domain 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: 10-formyltetrahydrofolate dehydrogenase domain 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.48  E-value=1.7  Score=31.72  Aligned_cols=30  Identities=23%  Similarity=0.233  Sum_probs=23.9

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEe
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVD  101 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~  101 (248)
                      |+|++.| ++-.|..+.+.|.++|++|+.+.
T Consensus         1 MkI~~~G-~~~~~~~~l~~L~~~~~~i~~V~   30 (203)
T d2bw0a2           1 MKIAVIG-QSLFGQEVYCHLRKEGHEVVGVF   30 (203)
T ss_dssp             CEEEEEC-CHHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CEEEEEc-CCHHHHHHHHHHHHCCCcEEEEE
Confidence            3466665 67789999999999999998654

>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein BH2331
species: Bacillus halodurans [TaxId: 86665]

Probab=82.42  E-value=1.4  Score=32.28  Aligned_cols=76  Identities=16%  Similarity=0.070  Sum_probs=46.0

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li  150 (248)
                      ++||=.|+..|.-   +..|+++|++|+++|.++...+.+.+..+..  ...++.++.+|..+..     +..+.+|+|+
T Consensus        17 ~rVLDiGcG~G~~---~~~l~~~~~~v~gvD~s~~~i~~A~~~~~~~--~~~~i~~~~~d~~~l~-----~~~~~fD~v~   86 (231)
T d1vl5a_          17 EEVLDVATGGGHV---ANAFAPFVKKVVAFDLTEDILKVARAFIEGN--GHQQVEYVQGDAEQMP-----FTDERFHIVT   86 (231)
T ss_dssp             CEEEEETCTTCHH---HHHHGGGSSEEEEEESCHHHHHHHHHHHHHT--TCCSEEEEECCC-CCC-----SCTTCEEEEE
T ss_pred             CEEEEecccCcHH---HHHHHHhCCEEEEEECCHHHHhhhhhccccc--cccccccccccccccc-----cccccccccc
Confidence            7899998665533   3567788999999985433222222222222  2357889999886532     2234689888


Q ss_pred             Eccccc
Q 025786          151 HFAAVA  156 (248)
Q Consensus       151 ~~Ag~~  156 (248)
                      -+....
T Consensus        87 ~~~~l~   92 (231)
T d1vl5a_          87 CRIAAH   92 (231)
T ss_dssp             EESCGG
T ss_pred             cccccc
Confidence            766543

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=82.17  E-value=0.82  Score=32.37  Aligned_cols=33  Identities=24%  Similarity=0.199  Sum_probs=29.8

Q ss_pred             ceEEEEecCCchhHHHHHHHHHHCCCEEEEEecC
Q 025786           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNL  103 (248)
Q Consensus        70 ~k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~  103 (248)
                      +|+++|.| -|.+|+.+|+.|...|++|+++...
T Consensus        23 Gk~vvV~G-YG~vGrG~A~~~rg~Ga~V~V~E~D   55 (163)
T d1v8ba1          23 GKIVVICG-YGDVGKGCASSMKGLGARVYITEID   55 (163)
T ss_dssp             TSEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSC
T ss_pred             CCEEEEec-ccccchhHHHHHHhCCCEEEEEecC
Confidence            49999998 7999999999999999999998753

>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical protein PH0226
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=82.16  E-value=1  Score=32.72  Aligned_cols=74  Identities=19%  Similarity=0.145  Sum_probs=45.0

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li  150 (248)
                      .+||=.|+..|.   ++..|++.|++|+++|.++...+.+.+.....   ...+..+..|..+..     +.....|+|+
T Consensus        39 ~~ILDiGcG~G~---~~~~la~~~~~v~giD~S~~~i~~ak~~~~~~---~~~~~~~~~d~~~l~-----~~~~~fD~I~  107 (226)
T d1ve3a1          39 GKVLDLACGVGG---FSFLLEDYGFEVVGVDISEDMIRKAREYAKSR---ESNVEFIVGDARKLS-----FEDKTFDYVI  107 (226)
T ss_dssp             CEEEEETCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT---TCCCEEEECCTTSCC-----SCTTCEEEEE
T ss_pred             CEEEEECCCcch---hhhhHhhhhcccccccccccchhhhhhhhccc---ccccccccccccccc-----ccCcCceEEE
Confidence            478999966544   55677788999999996433222222222222   345677888876532     2224689988


Q ss_pred             Ecccc
Q 025786          151 HFAAV  155 (248)
Q Consensus       151 ~~Ag~  155 (248)
                      .+...
T Consensus       108 ~~~~l  112 (226)
T d1ve3a1         108 FIDSI  112 (226)
T ss_dssp             EESCG
T ss_pred             Eecch
Confidence            76543

>d1nv8a_ c.66.1.30 (A:) N5-glutamine methyltransferase, HemK {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: N5-glutamine methyltransferase, HemK
domain: N5-glutamine methyltransferase, HemK
species: Thermotoga maritima [TaxId: 2336]

Probab=81.88  E-value=2.2  Score=32.72  Aligned_cols=78  Identities=15%  Similarity=0.068  Sum_probs=45.6

Q ss_pred             eEEE-EecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 025786           71 THVL-VTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (248)
Q Consensus        71 k~vl-ITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~l  149 (248)
                      ++++ +.+|+|.|+..+++   ...++|+++|.++...+-+.+..+.. ....++.+...|+.+.-.  .  ..+++|+|
T Consensus       112 ~~vld~g~GsG~i~~~la~---~~~~~v~a~Dis~~Al~~A~~Na~~~-~~~~~~~i~~~~~~~~~~--~--~~~~fDlI  183 (271)
T d1nv8a_         112 KTVADIGTGSGAIGVSVAK---FSDAIVFATDVSSKAVEIARKNAERH-GVSDRFFVRKGEFLEPFK--E--KFASIEMI  183 (271)
T ss_dssp             CEEEEESCTTSHHHHHHHH---HSSCEEEEEESCHHHHHHHHHHHHHT-TCTTSEEEEESSTTGGGG--G--GTTTCCEE
T ss_pred             cEEEEeeeeeehhhhhhhh---cccceeeechhhhhHHHHHHHHHHHc-CCCceeEEeecccccccc--c--ccCcccEE
Confidence            4455 55566667766553   35679999996554333333333332 223467778888865311  1  11478999


Q ss_pred             EEccccc
Q 025786          150 MHFAAVA  156 (248)
Q Consensus       150 i~~Ag~~  156 (248)
                      |-|--..
T Consensus       184 VsNPPYI  190 (271)
T d1nv8a_         184 LSNPPYV  190 (271)
T ss_dssp             EECCCCB
T ss_pred             EEccccc
Confidence            9996543

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=81.87  E-value=1.6  Score=30.23  Aligned_cols=31  Identities=19%  Similarity=0.173  Sum_probs=23.8

Q ss_pred             EEEEecCCchhHHHHHHHHHHCCCEEEEEecCC
Q 025786           72 HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (248)
Q Consensus        72 ~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~  104 (248)
                      +|-+.| .|-+|..+++.|++.|+.| +.+|+.
T Consensus         2 kIg~IG-lG~MG~~ma~~L~~~g~~~-~~~~~~   32 (156)
T d2cvza2           2 KVAFIG-LGAMGYPMAGHLARRFPTL-VWNRTF   32 (156)
T ss_dssp             CEEEEC-CSTTHHHHHHHHHTTSCEE-EECSST
T ss_pred             eEEEEe-HHHHHHHHHHHHHhCCCEE-EEeCCH
Confidence            466666 5999999999999999866 455443

>d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein MJ0882
domain: Hypothetical protein MJ0882
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=81.75  E-value=1.9  Score=30.88  Aligned_cols=73  Identities=18%  Similarity=0.214  Sum_probs=43.2

Q ss_pred             eEEEEec-CCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 025786           71 THVLVTG-GAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (248)
Q Consensus        71 k~vlITG-asg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~l  149 (248)
                      ++||=.| |+|.++.    .|++.+.+|++++.++...+.+.+..+...-...++.++..|+.+.      +....+|+|
T Consensus        54 ~~VLDiGcG~G~~~~----~la~~~~~v~~iD~s~~~i~~a~~n~~~~~l~~~~i~~~~~d~~~~------~~~~~fD~I  123 (194)
T d1dusa_          54 DDILDLGCGYGVIGI----ALADEVKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYEN------VKDRKYNKI  123 (194)
T ss_dssp             CEEEEETCTTSHHHH----HHGGGSSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTT------CTTSCEEEE
T ss_pred             CeEEEEeecCChhHH----HHHhhccccceeeeccccchhHHHHHHHhCCccceEEEEEcchhhh------hccCCceEE
Confidence            6677766 5565554    4556778999998654333323332222222234688899998642      223468999


Q ss_pred             EEcc
Q 025786          150 MHFA  153 (248)
Q Consensus       150 i~~A  153 (248)
                      +.|.
T Consensus       124 i~~~  127 (194)
T d1dusa_         124 ITNP  127 (194)
T ss_dssp             EECC
T ss_pred             EEcc
Confidence            9764

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=81.65  E-value=1.1  Score=30.82  Aligned_cols=31  Identities=19%  Similarity=0.248  Sum_probs=28.6

Q ss_pred             eEEEEecCC---chhHHHHHHHHHHCCCEEEEEe
Q 025786           71 THVLVTGGA---GYIGSHAALRLLKDSYRVTIVD  101 (248)
Q Consensus        71 k~vlITGas---g~IG~~la~~L~~~G~~V~~~~  101 (248)
                      |+|.|.|+|   +-.|..+++.|.+.|++|+.+.
T Consensus        20 ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVn   53 (139)
T d2d59a1          20 KKIALVGASPKPERDANIVMKYLLEHGYDVYPVN   53 (139)
T ss_dssp             CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEEC
T ss_pred             CeEEEEeecCCCCCchHHHHHHHHHCCCEEEEEC
Confidence            899999999   6899999999999999998874

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=81.38  E-value=0.52  Score=35.33  Aligned_cols=72  Identities=11%  Similarity=-0.009  Sum_probs=45.7

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li  150 (248)
                      ++||=.|+..|.   ++..|+++|.+|+++|.++...+.+.+....   .+.++.++.+|+.+.+     + ...+|+|+
T Consensus        39 ~~vLDiGCG~G~---~~~~l~~~g~~v~GvD~S~~ml~~A~~~~~~---~~~~v~~~~~d~~~~~-----~-~~~fD~i~  106 (246)
T d1y8ca_          39 DDYLDLACGTGN---LTENLCPKFKNTWAVDLSQEMLSEAENKFRS---QGLKPRLACQDISNLN-----I-NRKFDLIT  106 (246)
T ss_dssp             TEEEEETCTTST---THHHHGGGSSEEEEECSCHHHHHHHHHHHHH---TTCCCEEECCCGGGCC-----C-SCCEEEEE
T ss_pred             CeEEEEeCcCCH---HHHHHHHhCCccEeeccchhhhhhccccccc---cCccceeeccchhhhc-----c-cccccccc
Confidence            679999966553   6678888999999998543322222222222   2346888999886542     1 23689888


Q ss_pred             Eccc
Q 025786          151 HFAA  154 (248)
Q Consensus       151 ~~Ag  154 (248)
                      ...+
T Consensus       107 ~~~~  110 (246)
T d1y8ca_         107 CCLD  110 (246)
T ss_dssp             ECTT
T ss_pred             eeee
Confidence            5433

>d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein SMu776, middle and C-terminal domains
species: Streptococcus mutans [TaxId: 1309]

Probab=81.33  E-value=10  Score=29.39  Aligned_cols=77  Identities=12%  Similarity=0.004  Sum_probs=45.3

Q ss_pred             eEEEEe-cCCchhHHHHHHHHHHCCC-EEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhc-CCCC
Q 025786           71 THVLVT-GGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-NAFD  147 (248)
Q Consensus        71 k~vlIT-Gasg~IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-~~iD  147 (248)
                      ++||=. .++|+.+.+    ++..|+ +|+.+|.+....+.+.+..+.-.-...++.++..|+.  +.++.+.++ .++|
T Consensus       146 ~~VLdlf~~~G~~sl~----aa~~ga~~V~~vD~s~~a~~~a~~N~~~n~l~~~~~~~i~~d~~--~~l~~~~~~~~~fD  219 (317)
T d2b78a2         146 KTVLNLFSYTAAFSVA----AAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVF--DYFKYARRHHLTYD  219 (317)
T ss_dssp             CEEEEETCTTTHHHHH----HHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHH--HHHHHHHHTTCCEE
T ss_pred             CceeecCCCCcHHHHH----HHhCCCceEEEecCCHHHHHHHHHHHHHhcccCcceEEEEccHH--HHHHHHHhhcCCCC
Confidence            666644 466777654    334676 7999986544433333332221112347889999874  334555444 4699


Q ss_pred             EEEEcc
Q 025786          148 AVMHFA  153 (248)
Q Consensus       148 ~li~~A  153 (248)
                      +||-..
T Consensus       220 ~Ii~DP  225 (317)
T d2b78a2         220 IIIIDP  225 (317)
T ss_dssp             EEEECC
T ss_pred             EEEEcC
Confidence            999764

>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ribosomal protein L11 methyltransferase PrmA
domain: PrmA-like protein TTHA0656 (TT0836)
species: Thermus thermophilus [TaxId: 274]

Probab=81.01  E-value=4.1  Score=30.69  Aligned_cols=70  Identities=19%  Similarity=0.039  Sum_probs=43.0

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li  150 (248)
                      ++||=.|...|+   ++..+++.|++|+.+|.++...+.+.+..+.   ++.+..++..|+.      ..+..+..|+|+
T Consensus       122 ~~VLDiGcGsG~---l~i~aa~~g~~V~gvDis~~av~~A~~na~~---n~~~~~~~~~d~~------~~~~~~~fD~V~  189 (254)
T d2nxca1         122 DKVLDLGTGSGV---LAIAAEKLGGKALGVDIDPMVLPQAEANAKR---NGVRPRFLEGSLE------AALPFGPFDLLV  189 (254)
T ss_dssp             CEEEEETCTTSH---HHHHHHHTTCEEEEEESCGGGHHHHHHHHHH---TTCCCEEEESCHH------HHGGGCCEEEEE
T ss_pred             CEEEEcccchhH---HHHHHHhcCCEEEEEECChHHHHHHHHHHHH---cCCceeEEecccc------ccccccccchhh
Confidence            789988866554   2335667799999999765444333333222   2335567777653      233345789988


Q ss_pred             Ec
Q 025786          151 HF  152 (248)
Q Consensus       151 ~~  152 (248)
                      -|
T Consensus       190 an  191 (254)
T d2nxca1         190 AN  191 (254)
T ss_dssp             EE
T ss_pred             hc
Confidence            65

>d1rp0a1 c.3.1.6 (A:7-284) Thiazole biosynthetic enzyme Thi4 {Thale cress(Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Thi4-like
domain: Thiazole biosynthetic enzyme Thi4
species: Thale cress(Arabidopsis thaliana) [TaxId: 3702]

Probab=80.78  E-value=0.92  Score=34.62  Aligned_cols=33  Identities=33%  Similarity=0.514  Sum_probs=28.3

Q ss_pred             eEEEEecCCchhHHHHHHHHHHC-CCEEEEEecCC
Q 025786           71 THVLVTGGAGYIGSHAALRLLKD-SYRVTIVDNLS  104 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~-G~~V~~~~r~~  104 (248)
                      .-|+|.|| |.-|...|..|+++ |++|.++++.+
T Consensus        34 ~DViVIGa-GpaGL~aA~~LA~~~G~~V~vlE~~~   67 (278)
T d1rp0a1          34 TDVVVVGA-GSAGLSAAYEISKNPNVQVAIIEQSV   67 (278)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHTSTTSCEEEEESSS
T ss_pred             CCEEEECC-CHHHHHHHHHHHHccCCeEEEEecCC
Confidence            34899986 99999999999875 99999999754

>d1uwva2 c.66.1.40 (A:75-432) rRNA (Uracil-5-)-methyltransferase RumA, catalytic domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: (Uracil-5-)-methyltransferase
domain: rRNA (Uracil-5-)-methyltransferase RumA, catalytic domain
species: Escherichia coli [TaxId: 562]

Probab=80.38  E-value=1.2  Score=35.38  Aligned_cols=101  Identities=14%  Similarity=0.114  Sum_probs=55.6

Q ss_pred             eEEEEecCCchhHHHHHHHHHHCCCEEEEEecCCCCcchhhhhhhhhcCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 025786           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (248)
Q Consensus        71 k~vlITGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~iD~li  150 (248)
                      ..+=+-.|+|.+|..++    +++.+|+.+..+...-+.+.+..+.  ..-.++.++..|+.+.-.. .......+|+||
T Consensus       215 ~vlDLycG~G~fsl~La----~~~~~V~gvE~~~~ai~~A~~na~~--n~i~n~~~~~~~~~~~~~~-~~~~~~~~d~vi  287 (358)
T d1uwva2         215 RVLDLFCGMGNFTLPLA----TQAASVVGVEGVPALVEKGQQNARL--NGLQNVTFYHENLEEDVTK-QPWAKNGFDKVL  287 (358)
T ss_dssp             EEEEESCTTTTTHHHHH----TTSSEEEEEESCHHHHHHHHHHHHH--TTCCSEEEEECCTTSCCSS-SGGGTTCCSEEE
T ss_pred             eEEEecccccccchhcc----ccccEEEeccCcHHHHHHHHHhHHh--cccccceeeecchhhhhhh-hhhhhccCceEE
Confidence            34446678899988764    5678999997543332222222221  2234788898887652111 011123578887


Q ss_pred             EcccccccCCCCCCchhhHhhhHHHHHHHHHHHHHcCCCEEEEecc
Q 025786          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSST  196 (248)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~iV~~SS  196 (248)
                      -.     ++..  ..           ..++..+.+.++++|||+|-
T Consensus       288 lD-----PPR~--G~-----------~~~~~~l~~~~~~~ivYVSC  315 (358)
T d1uwva2         288 LD-----PARA--GA-----------AGVMQQIIKLEPIRIVYVSC  315 (358)
T ss_dssp             EC-----CCTT--CC-----------HHHHHHHHHHCCSEEEEEES
T ss_pred             eC-----CCCc--cH-----------HHHHHHHHHcCCCEEEEEeC
Confidence            43     1111  11           12334445556789999984

>d1d4ca2 c.3.1.4 (A:103-359,A:506-570) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella putrefaciens [TaxId: 24]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella putrefaciens [TaxId: 24]

Probab=80.14  E-value=0.85  Score=35.56  Aligned_cols=30  Identities=23%  Similarity=0.369  Sum_probs=26.9

Q ss_pred             EEEecCCchhHHHHHHHHHHCCCEEEEEecC
Q 025786           73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNL  103 (248)
Q Consensus        73 vlITGasg~IG~~la~~L~~~G~~V~~~~r~  103 (248)
                      |+|.| +|.-|...|..|+++|++|+++.+.
T Consensus        26 VvVIG-~G~aGl~aA~~la~~G~~V~llEk~   55 (322)
T d1d4ca2          26 VVIIG-SGGAGLAAAVSARDAGAKVILLEKE   55 (322)
T ss_dssp             EEEEC-SSHHHHHHHHHHHTTTCCEEEECSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCcEEEEeCC
Confidence            78887 6899999999999999999999864