BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025788
(248 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q84TF5|RHA4A_ARATH RING-H2 zinc finger protein RHA4a OS=Arabidopsis thaliana GN=RHA4A
PE=2 SV=1
Length = 174
Score = 174 bits (441), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 99/142 (69%), Positives = 120/142 (84%), Gaps = 4/142 (2%)
Query: 12 PQLYPQAIQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASVLSSPP--ILP-TSSNQA 68
P LYPQAIQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRAS LSSP ILP +SS+Q
Sbjct: 10 PHLYPQAIQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSSPSPMILPVSSSHQT 69
Query: 69 TTYVHSTCEHIGWKGEIKDRLPTILFDEELRTRDSQCCVCLGEFEIKEELLQVPSCKHVF 128
++++ S C + K E+KD+L +LF+EEL TRDS CCVCLGEFE+KEEL+++P CKH+F
Sbjct: 70 SSHLPSVCL-LDVKVELKDKLHVVLFNEELGTRDSLCCVCLGEFELKEELVEMPLCKHIF 128
Query: 129 HVECIHYWLHSNTTCPLCRCSI 150
H++CIH WL+S+ TCPLCR S+
Sbjct: 129 HLDCIHLWLYSHNTCPLCRSSV 150
>sp|Q9SN28|ATL7_ARATH RING-H2 finger protein ATL7 OS=Arabidopsis thaliana GN=ATL7 PE=2
SV=1
Length = 236
Score = 135 bits (340), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 61/150 (40%), Positives = 95/150 (63%), Gaps = 15/150 (10%)
Query: 11 APQLYPQAIQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASV--------LSSPPILP 62
AP ++ +LKLYQAFIFS+PI F+ I+ + Y+ YL+R ++ + +P
Sbjct: 16 APSNSTESEKLKLYQAFIFSVPICFTFIVLFVLYVIYLRRNSTTNVDWSSLGMRGGTFVP 75
Query: 63 TSSNQATTYVHSTCEHIGWKGEIKDRLPTILFDEELRTRDSQCCVCLGEFEIKEELLQVP 122
T++N +T +G +I++ LP +++ E +DSQC VCLG+++ +E+L Q+P
Sbjct: 76 TNNNLSTA-------ELGLSKDIREMLPVVIYKESFIVKDSQCSVCLGDYQAEEKLQQMP 128
Query: 123 SCKHVFHVECIHYWLHSNTTCPLCRCSIVP 152
SC H FH+ECI WL S+TTCPLCR S++P
Sbjct: 129 SCGHTFHMECIDLWLTSHTTCPLCRLSLIP 158
>sp|Q570X5|ATL58_ARATH RING-H2 finger protein ATL58 OS=Arabidopsis thaliana GN=ATL58 PE=2
SV=1
Length = 261
Score = 122 bits (306), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/137 (46%), Positives = 91/137 (66%), Gaps = 12/137 (8%)
Query: 20 QLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASVLSSPPILPTSSNQATTYVH----ST 75
+LKLYQAFIFS+PI F+ I+ LFYL YL+R +S L +S TT++ ST
Sbjct: 19 ELKLYQAFIFSVPICFTFIILFLFYLIYLRRSSSDL-------SSLGMRTTFIPGNSLST 71
Query: 76 CEHIGWKGEIKDRLPTILFDEELRTRDSQCCVCLGEFEIKEELLQVPSCKHVFHVECIHY 135
E +G E+++ LP ++F E DSQC VCLG+++ ++L Q+P CKH FH++CI
Sbjct: 72 IE-LGLSKELREMLPIVVFKESFTVMDSQCSVCLGDYQPNDKLQQIPVCKHTFHMDCIDL 130
Query: 136 WLHSNTTCPLCRCSIVP 152
WL S+TTCPLCR +++P
Sbjct: 131 WLTSHTTCPLCRLALIP 147
>sp|Q9SN27|ATL59_ARATH E3 ubiquitin-protein ligase ATL59 OS=Arabidopsis thaliana GN=ATL59
PE=1 SV=1
Length = 225
Score = 106 bits (265), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/153 (35%), Positives = 86/153 (56%), Gaps = 11/153 (7%)
Query: 2 MGFPDTPSEAPQLYPQAIQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASVLSSP--P 59
M F D + P ++ LK FI +PI +I+ L+ Y+ +V S
Sbjct: 1 MSFIDPRTYIPSNSTESQILKF--TFIVCVPICVILIVLLVLYIMRRNSNTNVDWSSLGG 58
Query: 60 ILPTSSNQATTYVHSTCEHIGWKGEIKDRLPTILFDEELRTRDSQCCVCLGEFEIKEELL 119
+PT++N +T +G +I++ LP +++ E D+QC VCLG+++ +E+L
Sbjct: 59 FVPTNNNLSTA-------ELGLSKDIREMLPIVIYKESFTVNDTQCSVCLGDYQAEEKLQ 111
Query: 120 QVPSCKHVFHVECIHYWLHSNTTCPLCRCSIVP 152
Q+PSC H FH+ECI WL S+TTCPLCR S++P
Sbjct: 112 QMPSCGHTFHMECIDLWLTSHTTCPLCRLSLIP 144
>sp|Q8GW38|ATL47_ARATH RING-H2 finger protein ATL47 OS=Arabidopsis thaliana GN=ATL47 PE=2
SV=1
Length = 369
Score = 80.5 bits (197), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 73/143 (51%), Gaps = 20/143 (13%)
Query: 28 IFSIPILFSIILFL-----LFYLFYLKRRASVLSSPPILPTSSNQATTYVHSTCE----- 77
I I +L S+I F+ L +YLK++ S LSS P SNQ + S
Sbjct: 53 ILFIIVLLSVIFFICSILHLLVRYYLKKKRSNLSSSP---NESNQNPEFSDSDTYQRQLQ 109
Query: 78 ---HI---GWKGEIKDRLPTILFDEELRTRDS-QCCVCLGEFEIKEELLQVPSCKHVFHV 130
H+ G + D LP L+ E T++ C VCL EF ++L +P+C H FH+
Sbjct: 110 QLFHLHDSGLDQALIDALPVFLYKEIKGTKEPFDCAVCLCEFSEDDKLRLLPNCSHAFHI 169
Query: 131 ECIHYWLHSNTTCPLCRCSIVPI 153
+CI WL SN+TCPLCR ++ +
Sbjct: 170 DCIDTWLLSNSTCPLCRGTLFSL 192
>sp|O64763|ATL9_ARATH E3 ubiquitin-protein ligase ATL9 OS=Arabidopsis thaliana GN=ATL9
PE=1 SV=1
Length = 378
Score = 78.2 bits (191), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 63/130 (48%), Gaps = 6/130 (4%)
Query: 28 IFSIPILFSIILFLLFYLFYLKRRASVLSSPPILPTSSNQATTYVHS--TCEHIGWKGEI 85
+ I +LF +I F++F + +R + S I ++ A + V G E
Sbjct: 52 VVVITVLFLVIFFMVFGSIFCRRSNAQFSRSSIFRSTDADAESQVVRIRRLTARGLDAEA 111
Query: 86 KDRLPTILFDEELRTR----DSQCCVCLGEFEIKEELLQVPSCKHVFHVECIHYWLHSNT 141
+ PT L+ E R +C VCL EFE E L +P C HVFH +C+ WL ++
Sbjct: 112 IETFPTFLYSEVKAVRIGKGGVECAVCLCEFEDDETLRLMPPCCHVFHADCVDVWLSEHS 171
Query: 142 TCPLCRCSIV 151
TCPLCR +V
Sbjct: 172 TCPLCRADLV 181
>sp|Q84W40|ATL11_ARATH RING-H2 finger protein ATL11 OS=Arabidopsis thaliana GN=ATL11 PE=2
SV=2
Length = 404
Score = 76.6 bits (187), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 64/127 (50%), Gaps = 9/127 (7%)
Query: 33 ILFSIILFLLFYLFYLKR-RASVLSSPPILPTSSNQATTYVHSTCEHI-GWKGEIKDRLP 90
+L S+ FL F+ Y++R V+ P N A ++ + + G I + P
Sbjct: 69 VLVSVFFFLGFFSVYIRRCLERVMGMDYGNP---NDAGNWLATNRQQARGLDASIIETFP 125
Query: 91 TILFD--EELRTRDS--QCCVCLGEFEIKEELLQVPSCKHVFHVECIHYWLHSNTTCPLC 146
T + + LR +C VCL EFE E L +P C HVFH CI WL S+TTCPLC
Sbjct: 126 TFQYSTVKTLRIGKEALECSVCLNEFEDDETLRLIPKCCHVFHPGCIDAWLRSHTTCPLC 185
Query: 147 RCSIVPI 153
R ++P+
Sbjct: 186 RADLIPV 192
>sp|Q8RXX9|ATL6_ARATH E3 ubiquitin-protein ligase ATL6 OS=Arabidopsis thaliana GN=ATL6
PE=1 SV=2
Length = 398
Score = 75.5 bits (184), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 65/134 (48%), Gaps = 7/134 (5%)
Query: 22 KLYQAFIFSIPILFSIILFLLFYLFYLKRRASVLSSPPILPTSSNQATTYVHSTCEHIGW 81
+L A + IL + + F+ F+ Y R S + + P ++ V++ G
Sbjct: 44 RLSPAMAVIVVILIAALFFMGFFSIYF-RHCSGVPDAGVSPAGGARSRATVNAAAR--GL 100
Query: 82 KGEIKDRLPTILFDE----ELRTRDSQCCVCLGEFEIKEELLQVPSCKHVFHVECIHYWL 137
+ + PT L+ + +L + +C +CL EFE E L +P C HVFH CI WL
Sbjct: 101 DVSVVETFPTFLYSDVKTQKLGKGELECAICLNEFEDDETLRLLPKCDHVFHPHCIDAWL 160
Query: 138 HSNTTCPLCRCSIV 151
++ TCP+CR ++
Sbjct: 161 EAHVTCPVCRANLA 174
>sp|Q8L9T5|ATL2_ARATH RING-H2 finger protein ATL2 OS=Arabidopsis thaliana GN=ATL2 PE=2
SV=2
Length = 304
Score = 74.7 bits (182), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 66/143 (46%), Gaps = 10/143 (6%)
Query: 30 SIPILFSIILFLLFYLFYLKRRASVLSSPPILPTSSNQATTYVHSTCE----------HI 79
+I ILF +++ ++F Y + + S N+ T V T +
Sbjct: 34 AIVILFFVVILMVFLHLYARWYLLRARRRHLRRRSRNRRATMVFFTADPSTAATSVVASR 93
Query: 80 GWKGEIKDRLPTILFDEELRTRDSQCCVCLGEFEIKEELLQVPSCKHVFHVECIHYWLHS 139
G + LP F +E +C VCL EFE E +P+C+H FHV+CI W HS
Sbjct: 94 GLDPNVIKSLPVFTFSDETHKDPIECAVCLSEFEESETGRVLPNCQHTFHVDCIDMWFHS 153
Query: 140 NTTCPLCRCSIVPITKLYNPATA 162
++TCPLCR + + + + A A
Sbjct: 154 HSTCPLCRSLVESLAGIESTAAA 176
>sp|Q9SK92|ATL15_ARATH E3 ubiquitin-protein ligase ATL15 OS=Arabidopsis thaliana GN=ATL15
PE=1 SV=1
Length = 381
Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 67/126 (53%), Gaps = 10/126 (7%)
Query: 104 QCCVCLGEFEIKEELLQVPSCKHVFHVECIHYWLHSNTTCPLCRCSIVPITKLYNPATAS 163
+C VCL EFE E L +P C HVFH CI WL S TTCPLCR ++VP+ + +S
Sbjct: 117 ECPVCLNEFEDDETLRLIPQCCHVFHPGCIDAWLRSQTTCPLCRANLVPVP---GESVSS 173
Query: 164 VVTRLLQDSGTNSNQNQQNTPSEQQEQQQLDGICTEQL--TIHIEGSSSASSTCSSSSKR 221
+ L +++G QN TP + ++ L E+L ++ G+ S S+ +
Sbjct: 174 EIPGLARETG----QNSLRTPIDDNRKRVLTS-PDERLIDSVAWTGNQSMPRKSMSTGWK 228
Query: 222 LSEMSS 227
L+E+ S
Sbjct: 229 LAELYS 234
>sp|P93823|ATL1_ARATH RING-H2 finger protein ATL1 OS=Arabidopsis thaliana GN=ATL1 PE=2
SV=1
Length = 381
Score = 71.6 bits (174), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 68/136 (50%), Gaps = 15/136 (11%)
Query: 28 IFSIPILFSIILFLLFYLFYLK------------RRASVLSSPPILPTSSNQATTYVHST 75
I I IL + L + +Y+F +K RR P++ S ++ + +
Sbjct: 46 IAVIGILATAFLLVSYYIFVIKCCLNWHQIDIFRRRRRSSDQNPLMIYSPHEVNRGLDES 105
Query: 76 CEHIGWKGEIKDRLPTILFDEELRTRDSQ-CCVCLGEFEIKEELLQVPSCKHVFHVECIH 134
+ K R ++ EE ++++SQ C VCL EF+ E+L +P+C HVFH++CI
Sbjct: 106 AIRAIPVFKFKKR--DVVAGEEDQSKNSQECSVCLNEFQEDEKLRIIPNCCHVFHIDCID 163
Query: 135 YWLHSNTTCPLCRCSI 150
WL N CPLCR S+
Sbjct: 164 IWLQGNANCPLCRTSV 179
>sp|Q8LF65|ATL17_ARATH RING-H2 finger protein ATL17 OS=Arabidopsis thaliana GN=ATL17 PE=2
SV=2
Length = 235
Score = 69.7 bits (169), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 54/113 (47%), Gaps = 7/113 (6%)
Query: 42 LFYLFYLKRRASVLSSPPILPTSSNQATTYVHSTCEHIGWKGEIKDRLPTILFDEELRTR 101
L+Y +YL R SSP ++ +T + + G I LP F
Sbjct: 20 LYYRWYLLR-----SSP--FNRTTAASTFFTDPSSTPGGLNPSIIKSLPIFTFSAVTALF 72
Query: 102 DSQCCVCLGEFEIKEELLQVPSCKHVFHVECIHYWLHSNTTCPLCRCSIVPIT 154
+C VCL EF+ E +P+CKH FHV CI W HS+++CPLCR I P
Sbjct: 73 AMECSVCLSEFKDNESGRVMPNCKHTFHVHCIDMWFHSHSSCPLCRSQIEPFA 125
>sp|Q9FHG8|ATL50_ARATH Putative RING-H2 finger protein ATL50 OS=Arabidopsis thaliana
GN=ATL50 PE=3 SV=1
Length = 210
Score = 69.7 bits (169), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 55/86 (63%), Gaps = 2/86 (2%)
Query: 98 LRTRDSQCCVCLGEFEIKEELLQVPSCKHVFHVECIHYWLHSNTTCPLCRCSIVPITKLY 157
LR S C VCL EF ++EL +P C H FHVECI WL +N+TCPLCR +++ +
Sbjct: 115 LRHDLSDCAVCLREFTAEDELRLLPKCSHAFHVECIDTWLLTNSTCPLCRDNLLLLGLTG 174
Query: 158 NPATASVVTRLLQDSGTNSNQNQQNT 183
+++++V L+ +S +++Q+ ++
Sbjct: 175 TASSSTIV--LVHESDGDNSQDSDSS 198
>sp|Q8RX29|ATL70_ARATH RING-H2 finger protein ATL70 OS=Arabidopsis thaliana GN=ATL70 PE=2
SV=1
Length = 217
Score = 69.7 bits (169), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 90 PTILFDEELRTRDSQCC-VCLGEFEIKEELLQVPSCKHVFHVECIHYWLHSNTTCPLCRC 148
P IL+ E + CC +CLG+++ K L Q+P C H+FH++CI WL N TCP+CR
Sbjct: 131 PKILYSEAKGPTTASCCAICLGDYKGKHLLRQLPDCNHLFHLKCIDTWLRLNPTCPVCRT 190
Query: 149 SIVP 152
S +P
Sbjct: 191 SPLP 194
>sp|Q8LGA5|ATL31_ARATH E3 ubiquitin-protein ligase ATL31 OS=Arabidopsis thaliana GN=ATL31
PE=1 SV=2
Length = 368
Score = 69.3 bits (168), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 68/153 (44%), Gaps = 9/153 (5%)
Query: 3 GFPDTPSEAPQLYPQAIQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASVLSSPPILP 62
G P TP + + P A L A + ++ + + F+ F+ Y++ +
Sbjct: 23 GQPGTPDQ--RHDPYAYSGSLSPAMAVVVVVVIAALFFMGFFTVYIRHCTGAVDGSV--- 77
Query: 63 TSSNQATTYVHSTCEHIGWKGEIKDRLPTILFDE----ELRTRDSQCCVCLGEFEIKEEL 118
T + A V + G E + PT ++ E ++ +C +CL EFE E L
Sbjct: 78 TPAGGARRRVTNATVARGLDAETIETFPTFVYSEVKTQKIGKGALECAICLNEFEDDETL 137
Query: 119 LQVPSCKHVFHVECIHYWLHSNTTCPLCRCSIV 151
+P C HVFH CI WL + TCP+CR ++
Sbjct: 138 RLLPKCDHVFHPHCIGAWLQGHVTCPVCRTNLA 170
>sp|Q9SJJ7|ATL57_ARATH RING-H2 finger protein ATL57 OS=Arabidopsis thaliana GN=ATL57 PE=2
SV=1
Length = 237
Score = 67.8 bits (164), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 58/135 (42%), Gaps = 20/135 (14%)
Query: 29 FSIPILFSIILFLLFYLFYLK----------------RRASVLSSPPILPTSSNQATTYV 72
+I IL + F+ F+ Y + R S SP L TS + Y
Sbjct: 52 LTIFILLVALFFMGFFSVYFRHFADSSSSTVDISSMPRTRSSRMSPRRLSTSVVVSRPYS 111
Query: 73 HSTCEHIGWKGEIKDRLPTILFDEELRTRDSQCCVCLGEFEIKEELLQVPSCKHVFHVEC 132
G + LP + + + R+ C +CL +FE E + +P C HVFHV+C
Sbjct: 112 FRR----GLDSQAVRSLPVYRYTKAAKQRNEDCVICLSDFEEGETVKVIPHCGHVFHVDC 167
Query: 133 IHYWLHSNTTCPLCR 147
+ WL S TCPLCR
Sbjct: 168 VDTWLSSYVTCPLCR 182
>sp|Q9LSW9|ATL16_ARATH RING-H2 finger protein ATL16 OS=Arabidopsis thaliana GN=ATL16 PE=2
SV=1
Length = 375
Score = 67.8 bits (164), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 42/67 (62%), Gaps = 5/67 (7%)
Query: 101 RDSQCCVCLGEFEIKEELLQVPSCKHVFHVECIHYWLHSNTTCPLCRCSI-----VPITK 155
R +C VCL EF+ +E+L +P+C H+FH++CI WL +N CPLCR + P +
Sbjct: 134 RSQECSVCLSEFQDEEKLRIIPNCSHLFHIDCIDVWLQNNANCPLCRTRVSCDTSFPPDR 193
Query: 156 LYNPATA 162
+ P+T+
Sbjct: 194 VSAPSTS 200
>sp|Q9M0R6|ATL35_ARATH Putative RING-H2 finger protein ATL35 OS=Arabidopsis thaliana
GN=ATL35 PE=3 SV=1
Length = 302
Score = 67.4 bits (163), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 80/190 (42%), Gaps = 29/190 (15%)
Query: 28 IFSIPILFSIILFLLFYLFYLKRRASVLSSPPILPTSSNQATTYVHSTCEHIGWKGEIKD 87
+ +I I S++ L FY RA V A+ V + G + E+ +
Sbjct: 56 VLAIFISLSMVACFLHKTFY---RAEV-----------EAASQEVFHSRARRGLEKELVE 101
Query: 88 RLPTILFDE----ELRTRDSQCCVCLGEFEIKEELLQVPSCKHVFHVECIHYWLHSNTTC 143
P L+ E ++ +C +CL EF KE L +P C H FH CI WL S +TC
Sbjct: 102 SFPIFLYSEVKGLKIGKGGVECAICLSEFVDKETLRWMPPCSHTFHANCIDVWLSSQSTC 161
Query: 144 PLCRCSI---------VPITKLYNPATASVVTRLLQDSGTNSNQNQQNTPSEQQEQ-QQL 193
P CR ++ PIT L LLQ GTN ++ P E Q Q L
Sbjct: 162 PACRANLSLKPGESYPYPITDLETGNEQRDEHSLLQ-LGTNLDRFTLQLPEEMQRQLVSL 220
Query: 194 DGICTEQLTI 203
+ I T +T+
Sbjct: 221 NLIRTSNMTL 230
>sp|Q5EAE9|ATL43_ARATH RING-H2 finger protein ATL43 OS=Arabidopsis thaliana GN=ATL43 PE=2
SV=2
Length = 407
Score = 67.0 bits (162), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 89 LPTILFDEELRTRDS-QCCVCLGEFEIKEELLQVPSCKHVFHVECIHYWLHSNTTCPLCR 147
LP F +D +C VCL FE E L +P CKH FHVEC+ WL +++TCPLCR
Sbjct: 129 LPVFRFGALSGHKDGLECAVCLARFEPTEVLRLLPKCKHAFHVECVDTWLDAHSTCPLCR 188
Query: 148 CSIVP 152
+ P
Sbjct: 189 YRVDP 193
>sp|Q7X843|ATL48_ARATH RING-H2 finger protein ATL48 OS=Arabidopsis thaliana GN=ATL48 PE=2
SV=2
Length = 349
Score = 67.0 bits (162), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 65/135 (48%), Gaps = 17/135 (12%)
Query: 37 IILFL--LFYLFYLKRRASVL-------SSPPILPTSSNQA--TTYVHSTCEHIGWKGEI 85
II+FL L+ +F R++S L +P + SS Q ++H + G
Sbjct: 130 IIVFLGVLYLIFKFLRKSSTLFPIPHFNYNPDLFSFSSPQLQHLFFLHDS----GLDQTA 185
Query: 86 KDRLPTILFDEELRTRDS--QCCVCLGEFEIKEELLQVPSCKHVFHVECIHYWLHSNTTC 143
D LP L+ + + C VCL EF ++L +P C H FH+ CI WL SN+TC
Sbjct: 186 IDALPVFLYGNVTISLEQPFDCAVCLNEFSDTDKLRLLPVCSHAFHLHCIDTWLLSNSTC 245
Query: 144 PLCRCSIVPITKLYN 158
PLCR S+ YN
Sbjct: 246 PLCRRSLSTSNVCYN 260
>sp|Q9M0R5|ATL36_ARATH Putative RING-H2 finger protein ATL36 OS=Arabidopsis thaliana
GN=ATL36 PE=3 SV=1
Length = 345
Score = 66.2 bits (160), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 80 GWKGEIKDRLPTILFDE----ELRTRDSQCCVCLGEFEIKEELLQVPSCKHVFHVECIHY 135
G + E+ + PT L+ E ++ +C +CL EFE +E L +P C H FH CI
Sbjct: 94 GLEKEVIESFPTFLYSEVKGLKIGKGGVECAICLSEFEDQETLRWMPPCSHTFHANCIDV 153
Query: 136 WLHSNTTCPLCRCSI 150
WL S +TCP+CR ++
Sbjct: 154 WLSSWSTCPVCRANL 168
>sp|Q9C7I1|ATL34_ARATH RING-H2 finger protein ATL34 OS=Arabidopsis thaliana GN=ATL34 PE=2
SV=1
Length = 327
Score = 65.5 bits (158), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 80 GWKGEIKDRLPTILFDE----ELRTRDSQCCVCLGEFEIKEELLQVPSCKHVFHVECIHY 135
G ++ + P+ L+ + ++ +C +CL EFE +E L +P C H FH CI
Sbjct: 99 GLGKDVINSFPSFLYSQVKGLKIGKGGVECAICLNEFEDEETLRLMPPCSHAFHASCIDV 158
Query: 136 WLHSNTTCPLCRCSIVP 152
WL S +TCP+CR S+ P
Sbjct: 159 WLSSRSTCPVCRASLPP 175
>sp|Q9LZJ6|ATL5_ARATH RING-H2 finger protein ATL5 OS=Arabidopsis thaliana GN=ATL5 PE=2
SV=1
Length = 257
Score = 65.5 bits (158), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 48/84 (57%), Gaps = 5/84 (5%)
Query: 85 IKDRLPTILFDEELRTRDS---QCCVCLGEFEIKEELLQVPSCKHVFHVECIHYWLHSNT 141
+ +++P ++ ++T +S +C VCL EFE +E +P C HVFHV+CI W S +
Sbjct: 92 VLEKIPIFVY--SVKTHESPLEECSVCLSEFEEDDEGRVLPKCGHVFHVDCIDTWFRSRS 149
Query: 142 TCPLCRCSIVPITKLYNPATASVV 165
+CPLCR + P + P + V
Sbjct: 150 SCPLCRAPVQPAQPVTEPEPVAAV 173
>sp|Q8LFY8|ATL54_ARATH RING-H2 finger protein ATL54 OS=Arabidopsis thaliana GN=ATL54 PE=2
SV=2
Length = 413
Score = 65.1 bits (157), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 32/52 (61%)
Query: 103 SQCCVCLGEFEIKEELLQVPSCKHVFHVECIHYWLHSNTTCPLCRCSIVPIT 154
+ C VCL EFE E L +P C H FH+ CI WL S+T CPLCR I I+
Sbjct: 175 TDCPVCLNEFEEDESLRLLPKCNHAFHISCIDTWLSSHTNCPLCRAGIAMIS 226
>sp|P0C041|ATL53_ARATH Putative RING-H2 finger protein ATL53 OS=Arabidopsis thaliana
GN=ATL53 PE=3 SV=2
Length = 310
Score = 64.7 bits (156), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 98 LRTRDSQCCVCLGEFEIKEELLQVPSCKHVFHVECIHYWLHSNTTCPLCRCS-IVPITK 155
+ + C +CLGEF E L +P C H FHV CI WL S++ CPLCR IVP T+
Sbjct: 148 FKINGTDCSICLGEFNEDESLRLLPKCNHTFHVVCIDRWLKSHSNCPLCRAKIIVPTTQ 206
>sp|Q9ZV53|ATL49_ARATH Putative RING-H2 finger protein ATL49 OS=Arabidopsis thaliana
GN=ATL49 PE=3 SV=1
Length = 423
Score = 64.7 bits (156), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 35/48 (72%)
Query: 104 QCCVCLGEFEIKEELLQVPSCKHVFHVECIHYWLHSNTTCPLCRCSIV 151
C VCL EFE +++L +P C H FHVECI WL S++TCPLCR +++
Sbjct: 125 DCPVCLCEFETEDKLRLLPKCSHAFHVECIDTWLLSHSTCPLCRSNLL 172
>sp|Q9FL07|ATL46_ARATH RING-H2 finger protein ATL46 OS=Arabidopsis thaliana GN=ATL46 PE=2
SV=1
Length = 376
Score = 64.7 bits (156), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 105 CCVCLGEFEIKEELLQVPSCKHVFHVECIHYWLHSNTTCPLCRCSIV-PITKLYNP 159
C VCL EF K++L +P C H FH+ CI WL SN+TCPLCR ++ P + NP
Sbjct: 143 CAVCLCEFSEKDKLRLLPMCSHAFHLNCIDTWLQSNSTCPLCRGTLFSPGFSMENP 198
>sp|Q9FGJ6|ATL79_ARATH RING-H2 finger protein ATL79 OS=Arabidopsis thaliana GN=ATL79 PE=2
SV=1
Length = 166
Score = 64.7 bits (156), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 42/63 (66%), Gaps = 2/63 (3%)
Query: 90 PTILF--DEELRTRDSQCCVCLGEFEIKEELLQVPSCKHVFHVECIHYWLHSNTTCPLCR 147
PT+++ D EL +++C +CL EFE E + + C+H FHV+CIH WL + ++CP CR
Sbjct: 90 PTLVYSSDLELAGAEAECAICLSEFEQGESIQVLEKCQHGFHVKCIHKWLSTRSSCPTCR 149
Query: 148 CSI 150
SI
Sbjct: 150 TSI 152
>sp|Q9LF64|ATL52_ARATH RING-H2 finger protein ATL52 OS=Arabidopsis thaliana GN=ATL52 PE=2
SV=1
Length = 362
Score = 64.7 bits (156), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 38/62 (61%), Gaps = 4/62 (6%)
Query: 103 SQCCVCLGEFEIKEELLQVPSCKHVFHVECIHYWLHSNTTCPLCRCSIVPITKLYNPATA 162
S C VCL EFE E L +P C H FH+ CI WL S++ CPLCR +T + NP TA
Sbjct: 140 SDCSVCLSEFEENESLRLLPKCNHAFHLPCIDTWLKSHSNCPLCRAF---VTGVNNP-TA 195
Query: 163 SV 164
SV
Sbjct: 196 SV 197
>sp|Q9M0R7|ATL39_ARATH RING-H2 finger protein ATL39 OS=Arabidopsis thaliana GN=ATL39 PE=2
SV=1
Length = 132
Score = 64.7 bits (156), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Query: 80 GWKGEIKDRLPTILFDE----ELRTRDSQCCVCLGEFEIKEELLQVPSCKHVFHVECIHY 135
G E P+ ++ E E + +C VCL EF+ E L VP C HVFH +C+
Sbjct: 56 GLDAEAIKSFPSFVYTEARGIEPGIGELECVVCLNEFKDDETLRLVPPCVHVFHADCVDI 115
Query: 136 WLHSNTTCPLCRCSIVP 152
WL ++TCP+CR +VP
Sbjct: 116 WLSHSSTCPICRAKVVP 132
>sp|Q9SRQ8|ATL51_ARATH RING-H2 finger protein ATL51 OS=Arabidopsis thaliana GN=ATL51 PE=2
SV=2
Length = 356
Score = 64.3 bits (155), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 52/112 (46%), Gaps = 19/112 (16%)
Query: 103 SQCCVCLGEFEIKEELLQVPSCKHVFHVECIHYWLHSNTTCPLCRC-----SIVPITKLY 157
S C VCL EF+ E L +P C H FHV CI WL S++ CPLCR S V I L
Sbjct: 157 SDCSVCLSEFQENESLRLLPKCNHAFHVPCIDTWLKSHSNCPLCRAFIVTSSAVEIVDLT 216
Query: 158 NPATAS-------------VVTRLLQDSGT-NSNQNQQNTPSEQQEQQQLDG 195
N + VV L++S + N N+ +TP + Q DG
Sbjct: 217 NQQIVTENNSISTGDDSVVVVNLDLENSRSRNETVNEGSTPKPPEMQDSRDG 268
>sp|O64762|ATL38_ARATH RING-H2 finger protein ATL38 OS=Arabidopsis thaliana GN=ATL38 PE=2
SV=1
Length = 302
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 68/157 (43%), Gaps = 10/157 (6%)
Query: 33 ILFSIILFLLFYLFYLKRRASVLSSPPILPTSSNQATTYVHSTCEHIGWKGEIKDRLPTI 92
ILF+I + L + + S I P + + + T G I + PT
Sbjct: 21 ILFAIFIVGLASVCFRWTSRQFYSQESINPFTDSDVESRTSITAVR-GLDEAIINSFPTF 79
Query: 93 LFDEELRTR----DSQCCVCLGEFEIKEELLQVPSCKHVFHVECIHYWLHSNTTCPLCRC 148
L+ E R +C VC+ EFE E L +P C HVFH +C+ WL ++TCPLCR
Sbjct: 80 LYSEVKERRIGIGGVECAVCICEFEDHETLRLMPECCHVFHADCVSVWLSDHSTCPLCRV 139
Query: 149 SIV--PITKLY---NPATASVVTRLLQDSGTNSNQNQ 180
+ P + Y P L D T +N+N+
Sbjct: 140 DLCLQPGERSYLNPEPDLVESTNSHLFDGVTWTNRNR 176
>sp|Q9SL78|ATL12_ARATH Putative RING-H2 finger protein ATL12 OS=Arabidopsis thaliana
GN=ATL12 PE=3 SV=1
Length = 390
Score = 63.5 bits (153), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 44/86 (51%)
Query: 104 QCCVCLGEFEIKEELLQVPSCKHVFHVECIHYWLHSNTTCPLCRCSIVPITKLYNPATAS 163
+C VCL +FE E L +P C+H FH+ CI WL + TCPLCR + L +S
Sbjct: 123 ECSVCLSKFEDVEILRLLPKCRHAFHIGCIDQWLEQHATCPLCRNRVNIEDDLSVLGNSS 182
Query: 164 VVTRLLQDSGTNSNQNQQNTPSEQQE 189
R+L S T ++ E++E
Sbjct: 183 TSLRILNQSETREEDSRLEIYIEREE 208
>sp|Q9SG96|ATL72_ARATH RING-H2 finger protein ATL72 OS=Arabidopsis thaliana GN=ATL72 PE=2
SV=1
Length = 181
Score = 63.5 bits (153), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 50/90 (55%), Gaps = 1/90 (1%)
Query: 63 TSSNQATTYVHSTCEHIGWKGEIKDRLPTILFDEEL-RTRDSQCCVCLGEFEIKEELLQV 121
++++ A + G K + ++P L+ + + ++C +CLG+FE E++ +
Sbjct: 71 SNASNANANLGRLAAATGLKKQALKQIPVGLYGSGIIDMKATECLICLGDFEDGEKVRVL 130
Query: 122 PSCKHVFHVECIHYWLHSNTTCPLCRCSIV 151
P C H FHV CI WL S ++CP CR S++
Sbjct: 131 PKCNHGFHVRCIDTWLLSRSSCPTCRQSLL 160
>sp|Q7XLY8|ATL41_ORYSJ E3 ubiquitin-protein ligase Os04g0590900 OS=Oryza sativa subsp.
japonica GN=Os04g0590900 PE=2 SV=2
Length = 383
Score = 63.5 bits (153), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 33/52 (63%)
Query: 103 SQCCVCLGEFEIKEELLQVPSCKHVFHVECIHYWLHSNTTCPLCRCSIVPIT 154
+ C VCLGEF E L +P C H FH +CI WL S++ CPLCR +I +T
Sbjct: 155 TDCSVCLGEFSDGESLRLLPRCSHAFHQQCIDTWLKSHSNCPLCRANITFVT 206
>sp|Q9LUL6|ATL61_ARATH Putative RING-H2 finger protein ATL61 OS=Arabidopsis thaliana
GN=ATL61 PE=3 SV=1
Length = 204
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 41/71 (57%)
Query: 77 EHIGWKGEIKDRLPTILFDEELRTRDSQCCVCLGEFEIKEELLQVPSCKHVFHVECIHYW 136
E +G K + +P + F+ + +C VCL E ++ +PSC H FHVECI W
Sbjct: 60 ERVGIKPYVLRSIPIVDFNTKDFKYVLECVVCLSELADGDKARVLPSCDHWFHVECIDSW 119
Query: 137 LHSNTTCPLCR 147
L SN+TCP+CR
Sbjct: 120 LQSNSTCPICR 130
>sp|Q9SLC4|ATL40_ARATH RING-H2 finger protein ATL40 OS=Arabidopsis thaliana GN=ATL40 PE=2
SV=1
Length = 217
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 53/120 (44%), Gaps = 25/120 (20%)
Query: 40 FLLFYLFYLKRRA-------SVLSSPPILPTSSNQATTYVHSTCEHIGWKGEIKDRLPTI 92
+ L+ F L RR+ SV+S PP G + LPT
Sbjct: 46 YYLYAKFVLHRRSAFQDLSFSVVSQPP------------------KRGLDSLVIASLPTF 87
Query: 93 LFDEELRTRDSQCCVCLGEFEIKEELLQVPSCKHVFHVECIHYWLHSNTTCPLCRCSIVP 152
+ + ++C VCL E K+ +P+CKHVFHV C+ WL + +TCP+CR P
Sbjct: 88 VVGIKNDVAGTECAVCLSLLEEKDNARMLPNCKHVFHVSCVDTWLTTQSTCPVCRTEAEP 147
>sp|Q9C1X4|YKW3_SCHPO Uncharacterized RING finger protein P32A8.03c
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPAP32A8.03c PE=4 SV=1
Length = 513
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 41/71 (57%), Gaps = 6/71 (8%)
Query: 88 RLPTILFDEELRTRDSQCCVCLGEFEIKEELLQVPSCKHVFHVECIHYWLHSNTTCPLCR 147
+ P L DEE +C +C+ F+I ++++Q+P CKH FH CI WL N TC +CR
Sbjct: 384 KPPKELIDEE-----GECTICMEMFKINDDVIQLP-CKHYFHENCIKPWLRVNGTCAICR 437
Query: 148 CSIVPITKLYN 158
+ P ++ N
Sbjct: 438 APVDPNSQQRN 448
>sp|Q8W571|ATL32_ARATH RING-H2 finger protein ATL32 OS=Arabidopsis thaliana GN=ATL32 PE=2
SV=3
Length = 323
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 39/56 (69%)
Query: 95 DEELRTRDSQCCVCLGEFEIKEELLQVPSCKHVFHVECIHYWLHSNTTCPLCRCSI 150
+ ++ ++D +C +CL E E E + +P C H+FH++CI WL+S+ TCP+CR ++
Sbjct: 114 ESKIGSKDLECAICLNELEDHETVRLLPICNHLFHIDCIDTWLYSHATCPVCRSNL 169
>sp|Q9FLC6|ATL73_ARATH RING-H2 finger protein ATL73 OS=Arabidopsis thaliana GN=ATL73 PE=2
SV=1
Length = 176
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%)
Query: 80 GWKGEIKDRLPTILFDEELRTRDSQCCVCLGEFEIKEELLQVPSCKHVFHVECIHYWLHS 139
G K +P + EL+ + ++C +CLG+F E + +P C H FHV+CI WL S
Sbjct: 88 GIKKRALKVIPVDSYSPELKMKATECLICLGDFVEGETVRVLPKCNHGFHVKCIDTWLLS 147
Query: 140 NTTCPLCRCSIV 151
+++CP CR S++
Sbjct: 148 HSSCPTCRQSLL 159
>sp|Q9LX93|ATL55_ARATH E3 ubiquitin-protein ligase RING1 OS=Arabidopsis thaliana GN=ATL55
PE=1 SV=1
Length = 301
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 34/53 (64%)
Query: 103 SQCCVCLGEFEIKEELLQVPSCKHVFHVECIHYWLHSNTTCPLCRCSIVPITK 155
++C VCL EFE E L +P C H FH+ CI WL S+ CPLCR ++ IT+
Sbjct: 133 TECSVCLNEFEEDESLRLLPKCSHAFHLNCIDTWLLSHKNCPLCRAPVLLITE 185
>sp|Q9SLC3|ATL41_ARATH E3 ubiquitin-protein ligase ATL41 OS=Arabidopsis thaliana GN=ATL41
PE=1 SV=1
Length = 236
Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 67/139 (48%), Gaps = 13/139 (9%)
Query: 22 KLYQAFIFSIPILFSIILFL-LFYLFYLKRRASVLSSPPILPTSSNQATTYVHS-TCEHI 79
K+ A + S+ + I+ L L+ F L+RR P++ + H
Sbjct: 30 KIMLAAVASLSGVILIVFALHLYARFVLRRRREAFRGLPVI---------FRHPFEMPKR 80
Query: 80 GWKGEIKDRLPTILFD--EELRTRDSQCCVCLGEFEIKEELLQVPSCKHVFHVECIHYWL 137
G + LPT + + ++C VCL + +++ ++P+CKH+FHV+C+ WL
Sbjct: 81 GLNPTVIASLPTFTVGATDGVAASATECAVCLSVLKEQDKARELPNCKHIFHVDCVDTWL 140
Query: 138 HSNTTCPLCRCSIVPITKL 156
+ +TCP+CR + P +L
Sbjct: 141 TTCSTCPVCRTEVEPRPRL 159
>sp|Q940Q4|ATL13_ARATH RING-H2 finger protein ATL13 OS=Arabidopsis thaliana GN=ATL13 PE=2
SV=2
Length = 472
Score = 62.4 bits (150), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 32/44 (72%)
Query: 104 QCCVCLGEFEIKEELLQVPSCKHVFHVECIHYWLHSNTTCPLCR 147
C VCL EFE +++L +P C H FH++CI WL S++TCPLCR
Sbjct: 133 DCAVCLCEFETEDKLRLLPKCSHAFHMDCIDTWLLSHSTCPLCR 176
>sp|Q9LY41|ATL4_ARATH E3 ubiquitin-protein ligase ATL4 OS=Arabidopsis thaliana GN=ATL4
PE=1 SV=1
Length = 334
Score = 62.4 bits (150), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 82 KGEIKDRLPTILFDEELRTRDS----QCCVCLGEFEIKEELLQVPSCKHVFHVECIHYWL 137
+ + D LP F R S C VCL +FE +++L +P C H FH +CI WL
Sbjct: 90 RSSVLDSLPIFKFSSVTRRSSSMNSGDCAVCLSKFEPEDQLRLLPLCCHAFHADCIDIWL 149
Query: 138 HSNTTCPLCR 147
SN TCPLCR
Sbjct: 150 VSNQTCPLCR 159
>sp|Q8GYT9|SIS3_ARATH E3 ubiquitin-protein ligase SIS3 OS=Arabidopsis thaliana GN=SIS3
PE=2 SV=2
Length = 358
Score = 62.4 bits (150), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 42/86 (48%), Gaps = 8/86 (9%)
Query: 103 SQCCVCLGEFEIKEELLQVPSCKHVFHVECIHYWLHSNTTCPLCRCSIVPITKLYNPATA 162
+C +CL EF I E+ +P C H FHVECI WL N CP CRCS+ P L +
Sbjct: 233 GECLICLEEFHIGHEVRGLP-CAHNFHVECIDQWLRLNVKCPRCRCSVFPDLDLSALSN- 290
Query: 163 SVVTRLLQDSGTNSNQNQQNTPSEQQ 188
LQ SGT + SE +
Sbjct: 291 ------LQSSGTEQHSQVNTETSEAR 310
>sp|Q8H7N9|ATL31_ORYSJ E3 ubiquitin-protein ligase Os03g0188200 OS=Oryza sativa subsp.
japonica GN=Os03g0188200 PE=2 SV=1
Length = 353
Score = 62.4 bits (150), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 44/73 (60%), Gaps = 7/73 (9%)
Query: 84 EIKDRLPTILFDEELRTRDS------QCCVCLGEFEIKEELLQVPSCKHVFHVECIHYWL 137
E+ + PT ++ + ++ R + +C VCL EF +EL +P+C HVFH +CI WL
Sbjct: 107 EVVEAFPTAVYGD-VKARMAAKSGPLECAVCLAEFADSDELRVLPACCHVFHPDCIDPWL 165
Query: 138 HSNTTCPLCRCSI 150
+ TCPLCR ++
Sbjct: 166 AAAVTCPLCRANL 178
>sp|Q9LRB7|EL5_ORYSJ E3 ubiquitin-protein ligase EL5 OS=Oryza sativa subsp. japonica
GN=EL5.1 PE=1 SV=1
Length = 325
Score = 62.4 bits (150), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 29/44 (65%)
Query: 104 QCCVCLGEFEIKEELLQVPSCKHVFHVECIHYWLHSNTTCPLCR 147
+C VCL E E EE +P C H FH EC+ WL S++TCPLCR
Sbjct: 133 ECAVCLAELEDGEEARFLPRCGHGFHAECVDMWLGSHSTCPLCR 176
>sp|Q9M0R4|ATL37_ARATH Putative RING-H2 finger protein ATL37 OS=Arabidopsis thaliana
GN=ATL37 PE=3 SV=1
Length = 357
Score = 62.0 bits (149), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 4/75 (5%)
Query: 80 GWKGEIKDRLPTILFDE----ELRTRDSQCCVCLGEFEIKEELLQVPSCKHVFHVECIHY 135
G ++ + P L+ E ++ +C +CL EFE +E L +P C H FH CI
Sbjct: 91 GIDKDVIESFPAFLYSEVKAFKIGNGGVECAICLCEFEDEEPLRWMPPCSHTFHANCIDE 150
Query: 136 WLHSNTTCPLCRCSI 150
WL S +TCP+CR ++
Sbjct: 151 WLSSRSTCPVCRANL 165
>sp|Q8LPN7|RNG1L_ARATH E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana
GN=At3g19950 PE=2 SV=1
Length = 328
Score = 61.6 bits (148), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 42/62 (67%), Gaps = 2/62 (3%)
Query: 87 DRLPTILFDEE-LRTRDSQCCVCLGEFEIKEELLQVPSCKHVFHVECIHYWLHSNTTCPL 145
D LPT+ ++ L++ +QC VC+ EFE ++ Q+P CKHVFH +C+ WL + +CP+
Sbjct: 197 DALPTVKVTKDMLKSEMNQCAVCMDEFEDGSDVKQMP-CKHVFHQDCLLPWLELHNSCPV 255
Query: 146 CR 147
CR
Sbjct: 256 CR 257
>sp|O22255|ATL64_ARATH RING-H2 finger protein ATL64 OS=Arabidopsis thaliana GN=ATL64 PE=2
SV=1
Length = 227
Score = 61.6 bits (148), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 3/71 (4%)
Query: 85 IKDRLPTILFDEE---LRTRDSQCCVCLGEFEIKEELLQVPSCKHVFHVECIHYWLHSNT 141
+ D++P ++ + +C VCL EFE ++E +P C H FHV+CI W S +
Sbjct: 85 VLDKIPIFVYSSKNPPPPEEKEECSVCLSEFEEEDEGRLLPKCGHSFHVDCIDTWFRSRS 144
Query: 142 TCPLCRCSIVP 152
TCPLCR + P
Sbjct: 145 TCPLCRAPVQP 155
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.132 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 91,189,891
Number of Sequences: 539616
Number of extensions: 3594323
Number of successful extensions: 25936
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 365
Number of HSP's successfully gapped in prelim test: 251
Number of HSP's that attempted gapping in prelim test: 23931
Number of HSP's gapped (non-prelim): 1811
length of query: 248
length of database: 191,569,459
effective HSP length: 114
effective length of query: 134
effective length of database: 130,053,235
effective search space: 17427133490
effective search space used: 17427133490
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)