Query 025789
Match_columns 248
No_of_seqs 160 out of 1181
Neff 8.9
Searched_HMMs 29240
Date Mon Mar 25 17:38:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025789.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025789hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3v0s_A Perakine reductase; AKR 100.0 4.9E-53 1.7E-57 368.6 17.9 240 7-246 95-334 (337)
2 1pyf_A IOLS protein; beta-alph 100.0 3.9E-50 1.3E-54 347.0 22.6 215 9-223 96-311 (312)
3 3n2t_A Putative oxidoreductase 100.0 3.9E-50 1.3E-54 351.7 21.4 225 9-234 117-344 (348)
4 1pz1_A GSP69, general stress p 100.0 1.1E-49 3.8E-54 346.9 21.1 222 10-231 97-322 (333)
5 3erp_A Putative oxidoreductase 100.0 2.5E-47 8.7E-52 334.4 23.2 212 9-221 130-349 (353)
6 3n6q_A YGHZ aldo-keto reductas 100.0 2.2E-47 7.7E-52 334.1 22.4 221 9-234 109-342 (346)
7 1lqa_A TAS protein; TIM barrel 100.0 3.7E-47 1.3E-51 332.7 23.3 214 9-222 103-339 (346)
8 3eau_A Voltage-gated potassium 100.0 5.1E-47 1.8E-51 329.4 23.5 215 9-225 95-325 (327)
9 3lut_A Voltage-gated potassium 100.0 7.4E-47 2.5E-51 333.1 21.4 221 9-231 129-365 (367)
10 1gve_A Aflatoxin B1 aldehyde r 100.0 3.3E-46 1.1E-50 324.4 21.4 220 10-232 81-326 (327)
11 2bp1_A Aflatoxin B1 aldehyde r 100.0 1.3E-45 4.6E-50 324.2 20.8 219 10-232 114-359 (360)
12 1ynp_A Oxidoreductase, AKR11C1 100.0 4.6E-45 1.6E-49 315.6 21.0 203 7-225 108-311 (317)
13 3up8_A Putative 2,5-diketo-D-g 100.0 5.6E-45 1.9E-49 312.0 20.8 194 8-234 98-295 (298)
14 1ur3_M Hypothetical oxidoreduc 100.0 9.1E-45 3.1E-49 314.0 21.6 193 9-224 120-316 (319)
15 1qwk_A Aldose reductase, aldo- 100.0 3.5E-44 1.2E-48 310.3 21.5 220 8-244 84-314 (317)
16 4gac_A Alcohol dehydrogenase [ 100.0 2.7E-44 9.1E-49 312.0 20.6 214 7-244 81-322 (324)
17 3ln3_A Dihydrodiol dehydrogena 100.0 6.9E-44 2.3E-48 309.4 22.8 211 8-243 88-321 (324)
18 3b3d_A YTBE protein, putative 100.0 5.1E-44 1.7E-48 308.7 20.0 188 6-226 118-305 (314)
19 3o3r_A Aldo-keto reductase fam 100.0 1.4E-43 4.6E-48 306.5 22.4 210 8-243 81-313 (316)
20 4f40_A Prostaglandin F2-alpha 100.0 1E-43 3.6E-48 303.4 21.0 184 8-225 86-278 (288)
21 3f7j_A YVGN protein; aldo-keto 100.0 1.4E-43 4.9E-48 300.7 21.6 184 8-226 82-267 (276)
22 4gie_A Prostaglandin F synthas 100.0 1.5E-43 5.1E-48 302.6 21.3 188 7-226 88-277 (290)
23 3b3e_A YVGN protein; aldo-keto 100.0 2.7E-43 9.3E-48 303.2 21.7 184 8-226 116-301 (310)
24 1vbj_A Prostaglandin F synthas 100.0 3.7E-43 1.3E-47 298.8 22.2 182 9-225 86-269 (281)
25 3buv_A 3-OXO-5-beta-steroid 4- 100.0 4.3E-43 1.5E-47 304.5 22.9 196 9-227 91-309 (326)
26 1afs_A 3-alpha-HSD, 3-alpha-hy 100.0 3.7E-43 1.3E-47 304.6 22.2 196 9-227 88-306 (323)
27 1us0_A Aldose reductase; oxido 100.0 9.7E-43 3.3E-47 301.1 24.1 197 8-228 81-300 (316)
28 3o0k_A Aldo/keto reductase; ss 100.0 1.9E-43 6.6E-48 300.7 19.2 179 8-220 101-282 (283)
29 1zgd_A Chalcone reductase; pol 100.0 3.6E-43 1.2E-47 303.3 21.1 196 8-231 90-303 (312)
30 1hw6_A 2,5-diketo-D-gluconic a 100.0 3.6E-43 1.2E-47 298.5 20.0 184 8-223 78-264 (278)
31 2wzm_A Aldo-keto reductase; ox 100.0 5.6E-43 1.9E-47 297.9 20.3 183 9-225 87-272 (283)
32 1s1p_A Aldo-keto reductase fam 100.0 1.6E-42 5.3E-47 301.5 22.1 196 9-227 88-306 (331)
33 1vp5_A 2,5-diketo-D-gluconic a 100.0 1.5E-42 5.1E-47 297.0 20.2 182 9-224 95-278 (298)
34 3h7u_A Aldo-keto reductase; st 100.0 1.8E-42 6.2E-47 301.4 20.3 199 8-233 104-318 (335)
35 3h7r_A Aldo-keto reductase; st 100.0 1.4E-42 4.9E-47 301.6 19.4 200 8-234 100-315 (331)
36 1mi3_A Xylose reductase, XR; a 100.0 5.1E-42 1.8E-46 297.3 21.6 197 9-225 85-308 (322)
37 1mzr_A 2,5-diketo-D-gluconate 100.0 4.6E-42 1.6E-46 293.7 19.8 180 14-225 104-286 (296)
38 3krb_A Aldose reductase; ssgci 100.0 1.8E-42 6.2E-47 301.4 16.7 195 8-224 95-317 (334)
39 2bgs_A Aldose reductase; holoe 100.0 1.1E-41 3.9E-46 297.0 20.2 187 9-227 116-319 (344)
40 4exb_A Putative uncharacterize 100.0 1.2E-41 4E-46 291.0 11.6 166 5-212 124-292 (292)
41 3cf4_A Acetyl-COA decarboxylas 98.6 1.8E-08 6E-13 96.1 2.3 132 20-198 231-384 (807)
42 2akz_A Gamma enolase, neural; 89.9 3.7 0.00013 36.2 11.6 96 11-115 270-368 (439)
43 2al1_A Enolase 1, 2-phospho-D- 89.4 4 0.00014 36.0 11.4 96 11-115 273-371 (436)
44 1tx2_A DHPS, dihydropteroate s 88.7 1.8 6.1E-05 36.2 8.2 100 12-118 61-167 (297)
45 3qtp_A Enolase 1; glycolysis, 86.9 9.8 0.00033 33.5 12.1 96 11-115 279-378 (441)
46 3tqp_A Enolase; energy metabol 86.2 12 0.00039 32.9 12.3 106 1-115 250-363 (428)
47 1eye_A DHPS 1, dihydropteroate 85.2 15 0.0005 30.3 14.4 177 1-204 19-222 (280)
48 2yci_X 5-methyltetrahydrofolat 83.7 4.9 0.00017 33.0 8.3 100 12-118 32-133 (271)
49 1kko_A 3-methylaspartate ammon 83.0 12 0.00041 32.5 11.0 107 10-119 248-361 (413)
50 3qn3_A Enolase; structural gen 82.6 7.9 0.00027 33.9 9.6 108 2-118 249-364 (417)
51 2pa6_A Enolase; glycolysis, ly 79.3 6 0.0002 34.6 7.7 104 3-115 256-365 (427)
52 2fym_A Enolase; RNA degradosom 78.5 14 0.00048 32.3 9.9 100 11-119 267-371 (431)
53 3otr_A Enolase; structural gen 78.2 28 0.00095 30.7 11.5 98 11-115 281-381 (452)
54 3k13_A 5-methyltetrahydrofolat 77.4 30 0.001 28.7 11.1 104 12-122 35-145 (300)
55 2qgy_A Enolase from the enviro 77.4 21 0.00072 30.6 10.6 98 11-118 205-304 (391)
56 2poz_A Putative dehydratase; o 77.0 11 0.00039 32.3 8.8 83 33-119 226-310 (392)
57 2rdx_A Mandelate racemase/muco 77.0 5.4 0.00019 34.2 6.7 74 49-122 225-300 (379)
58 1aj0_A DHPS, dihydropteroate s 75.9 32 0.0011 28.3 12.6 138 11-171 35-179 (282)
59 2o56_A Putative mandelate race 75.7 15 0.00051 31.7 9.2 70 50-119 255-326 (407)
60 2nql_A AGR_PAT_674P, isomerase 75.1 12 0.0004 32.2 8.3 101 11-122 219-321 (388)
61 2pgw_A Muconate cycloisomerase 74.7 7.6 0.00026 33.3 7.0 101 11-121 201-303 (384)
62 2ovl_A Putative racemase; stru 74.3 24 0.00081 30.0 10.1 99 11-119 202-302 (371)
63 2dqw_A Dihydropteroate synthas 73.6 38 0.0013 28.1 11.8 107 1-118 42-154 (294)
64 1mdl_A Mandelate racemase; iso 72.9 12 0.0004 31.8 7.7 97 11-117 200-298 (359)
65 3uj2_A Enolase 1; enzyme funct 72.6 39 0.0013 29.8 11.1 95 12-115 290-389 (449)
66 2ptz_A Enolase; lyase, glycoly 72.6 44 0.0015 29.2 11.4 95 12-115 273-372 (432)
67 3i4k_A Muconate lactonizing en 72.4 32 0.0011 29.4 10.5 102 11-122 205-308 (383)
68 1nu5_A Chloromuconate cycloiso 72.2 7 0.00024 33.3 6.1 102 11-122 199-302 (370)
69 3gd6_A Muconate cycloisomerase 72.2 9.5 0.00032 32.9 7.0 103 11-122 198-301 (391)
70 2og9_A Mandelate racemase/muco 70.3 20 0.00067 30.8 8.6 98 11-118 218-317 (393)
71 3q45_A Mandelate racemase/muco 70.1 9.4 0.00032 32.6 6.5 74 49-122 223-298 (368)
72 2y5s_A DHPS, dihydropteroate s 70.1 20 0.00067 29.8 8.2 148 1-173 36-189 (294)
73 3dg3_A Muconate cycloisomerase 68.8 17 0.00057 31.0 7.8 91 22-122 206-298 (367)
74 2gl5_A Putative dehydratase pr 68.5 18 0.0006 31.3 8.0 69 50-118 258-328 (410)
75 2qde_A Mandelate racemase/muco 68.2 18 0.00062 31.1 8.0 102 11-122 200-303 (397)
76 3bjs_A Mandelate racemase/muco 67.8 34 0.0012 29.7 9.7 97 10-116 239-338 (428)
77 2zad_A Muconate cycloisomerase 67.3 13 0.00046 31.2 6.8 103 11-122 193-297 (345)
78 1nsj_A PRAI, phosphoribosyl an 67.2 15 0.00053 28.6 6.6 65 24-90 18-83 (205)
79 2pp0_A L-talarate/galactarate 67.1 24 0.00084 30.3 8.6 97 11-117 231-329 (398)
80 3p3b_A Mandelate racemase/muco 67.0 7.2 0.00025 33.6 5.1 79 32-116 227-311 (392)
81 1sjd_A N-acylamino acid racema 66.9 9.2 0.00032 32.5 5.7 101 11-122 194-296 (368)
82 1chr_A Chloromuconate cycloiso 66.7 30 0.001 29.4 8.9 86 33-122 215-302 (370)
83 1r0m_A N-acylamino acid racema 66.5 8.3 0.00028 32.9 5.4 90 24-122 211-302 (375)
84 1nvm_A HOA, 4-hydroxy-2-oxoval 66.1 13 0.00045 31.5 6.5 107 8-116 24-139 (345)
85 2qq6_A Mandelate racemase/muco 65.1 17 0.00059 31.4 7.2 70 50-119 250-321 (410)
86 2p0o_A Hypothetical protein DU 64.7 67 0.0023 27.5 10.6 147 22-203 73-236 (372)
87 1tkk_A Similar to chloromucona 64.4 9.7 0.00033 32.4 5.4 103 11-121 196-300 (366)
88 1f6y_A 5-methyltetrahydrofolat 64.1 56 0.0019 26.4 11.8 100 12-118 23-124 (262)
89 2p8b_A Mandelate racemase/muco 63.9 6.1 0.00021 33.7 4.0 73 49-121 225-299 (369)
90 3s5s_A Mandelate racemase/muco 63.4 18 0.00063 31.1 7.0 87 31-122 215-303 (389)
91 2ox4_A Putative mandelate race 62.8 6.8 0.00023 33.9 4.1 70 50-119 249-320 (403)
92 3ik4_A Mandelate racemase/muco 62.7 19 0.00063 30.7 6.8 86 32-122 215-302 (365)
93 1ydn_A Hydroxymethylglutaryl-C 62.3 11 0.00037 31.1 5.1 104 10-116 22-139 (295)
94 3r0u_A Enzyme of enolase super 62.1 48 0.0016 28.3 9.4 87 32-122 214-302 (379)
95 4dwd_A Mandelate racemase/muco 62.1 46 0.0016 28.6 9.3 100 11-122 202-303 (393)
96 3mwc_A Mandelate racemase/muco 61.9 27 0.00094 30.1 7.8 101 11-122 216-318 (400)
97 1w6t_A Enolase; bacterial infe 61.4 72 0.0025 27.8 10.6 96 11-115 279-379 (444)
98 2xvc_A ESCRT-III, SSO0910; cel 61.3 8 0.00027 23.7 3.0 21 44-64 37-57 (59)
99 1v5x_A PRA isomerase, phosphor 60.9 18 0.00061 28.2 5.9 66 24-91 17-83 (203)
100 3jva_A Dipeptide epimerase; en 60.3 33 0.0011 28.9 8.0 84 32-119 209-294 (354)
101 2hxt_A L-fuconate dehydratase; 60.1 17 0.00057 31.9 6.2 96 11-116 253-351 (441)
102 4h1z_A Enolase Q92ZS5; dehydra 59.5 25 0.00086 30.4 7.2 86 32-123 258-346 (412)
103 2vp8_A Dihydropteroate synthas 59.2 25 0.00084 29.5 6.8 109 1-118 55-168 (318)
104 4dye_A Isomerase; enolase fami 59.0 18 0.00063 31.2 6.2 97 11-119 223-321 (398)
105 3u9i_A Mandelate racemase/muco 57.8 21 0.00071 30.8 6.3 86 32-122 245-332 (393)
106 1kcz_A Beta-methylaspartase; b 57.5 45 0.0015 28.8 8.5 82 36-117 271-359 (413)
107 3i6e_A Muconate cycloisomerase 57.4 24 0.00083 30.2 6.7 93 21-122 212-306 (385)
108 3ddm_A Putative mandelate race 57.4 29 0.001 29.8 7.2 98 11-117 210-309 (392)
109 4e8g_A Enolase, mandelate race 57.1 34 0.0011 29.4 7.5 92 23-123 229-322 (391)
110 2hzg_A Mandelate racemase/muco 56.6 28 0.00095 30.0 7.0 95 12-116 207-304 (401)
111 2zc8_A N-acylamino acid racema 56.5 14 0.00047 31.4 5.0 101 11-122 193-295 (369)
112 3fv9_G Mandelate racemase/muco 56.4 27 0.00092 30.0 6.8 92 23-122 213-306 (386)
113 2ozt_A TLR1174 protein; struct 56.3 70 0.0024 26.6 9.3 104 10-122 171-277 (332)
114 3eez_A Putative mandelate race 56.1 14 0.00047 31.7 4.9 73 50-122 226-300 (378)
115 3ozy_A Putative mandelate race 56.0 78 0.0027 27.0 9.7 97 11-117 206-305 (389)
116 3tj4_A Mandelate racemase; eno 55.9 43 0.0015 28.5 8.0 82 32-117 223-306 (372)
117 1ydo_A HMG-COA lyase; TIM-barr 55.6 54 0.0018 27.1 8.3 104 9-115 23-140 (307)
118 1wuf_A Hypothetical protein LI 55.3 20 0.00068 30.8 5.8 87 32-122 227-315 (393)
119 2ftp_A Hydroxymethylglutaryl-C 55.0 20 0.00069 29.6 5.6 104 9-115 25-142 (302)
120 2vef_A Dihydropteroate synthas 54.9 73 0.0025 26.5 9.0 109 1-118 23-137 (314)
121 3my9_A Muconate cycloisomerase 54.5 25 0.00084 30.0 6.2 93 21-122 211-305 (377)
122 3dip_A Enolase; structural gen 54.2 24 0.00082 30.6 6.2 69 50-118 254-324 (410)
123 2gdq_A YITF; mandelate racemas 53.6 35 0.0012 29.1 7.1 80 33-116 212-293 (382)
124 2oz8_A MLL7089 protein; struct 53.4 37 0.0013 29.0 7.2 92 11-116 201-296 (389)
125 3mkc_A Racemase; metabolic pro 52.9 50 0.0017 28.3 8.0 69 50-118 246-316 (394)
126 1tzz_A Hypothetical protein L1 51.6 38 0.0013 29.0 7.0 97 11-117 221-326 (392)
127 2fkn_A Urocanate hydratase; ro 51.5 52 0.0018 29.4 7.6 58 23-87 199-257 (552)
128 4e4u_A Mandalate racemase/muco 51.1 1.2E+02 0.0041 26.1 10.5 68 50-117 241-310 (412)
129 1x87_A Urocanase protein; stru 50.6 52 0.0018 29.4 7.5 57 24-87 199-256 (551)
130 4djd_D C/Fe-SP, corrinoid/iron 50.2 46 0.0016 28.0 7.0 93 21-119 87-189 (323)
131 4e5t_A Mandelate racemase / mu 50.2 53 0.0018 28.3 7.7 68 50-117 248-317 (404)
132 2chr_A Chloromuconate cycloiso 50.1 17 0.00057 30.9 4.4 73 50-122 228-302 (370)
133 1t57_A Conserved protein MTH16 50.1 88 0.003 24.3 9.4 87 34-122 25-117 (206)
134 3sjn_A Mandelate racemase/muco 49.9 36 0.0012 29.0 6.5 69 50-118 234-304 (374)
135 4hpn_A Putative uncharacterize 49.9 48 0.0016 28.1 7.3 67 50-116 228-296 (378)
136 3l9c_A 3-dehydroquinate dehydr 49.5 47 0.0016 26.9 6.8 26 10-35 105-130 (259)
137 1rvk_A Isomerase/lactonizing e 49.1 98 0.0033 26.1 9.2 96 11-116 211-309 (382)
138 1qwg_A PSL synthase;, (2R)-pho 48.9 60 0.0021 26.2 7.2 97 18-115 26-132 (251)
139 3ekg_A Mandelate racemase/muco 48.8 68 0.0023 27.7 8.1 81 33-117 237-321 (404)
140 2cw6_A Hydroxymethylglutaryl-C 48.8 75 0.0026 26.0 8.2 105 9-116 22-140 (298)
141 3toy_A Mandelate racemase/muco 48.0 96 0.0033 26.4 9.0 99 11-119 224-324 (383)
142 3sbf_A Mandelate racemase / mu 47.4 78 0.0027 27.1 8.4 70 50-119 241-312 (401)
143 3t6c_A RSPA, putative MAND fam 47.2 38 0.0013 29.6 6.4 71 49-119 279-351 (440)
144 2ps2_A Putative mandelate race 47.0 22 0.00075 30.2 4.7 74 49-122 227-302 (371)
145 2qdd_A Mandelate racemase/muco 46.5 33 0.0011 29.2 5.8 74 49-122 225-300 (378)
146 3qld_A Mandelate racemase/muco 46.5 21 0.00072 30.7 4.5 87 32-122 215-303 (388)
147 3dgb_A Muconate cycloisomerase 46.2 31 0.0011 29.5 5.6 73 50-122 234-308 (382)
148 3v3w_A Starvation sensing prot 45.9 38 0.0013 29.5 6.1 68 52-119 268-337 (424)
149 4hb7_A Dihydropteroate synthas 45.4 1.2E+02 0.0042 24.6 9.4 107 1-117 20-132 (270)
150 1uwk_A Urocanate hydratase; hy 45.3 52 0.0018 29.4 6.7 57 24-87 204-261 (557)
151 3r4e_A Mandelate racemase/muco 45.2 35 0.0012 29.6 5.8 52 68-119 279-331 (418)
152 2opj_A O-succinylbenzoate-COA 45.0 55 0.0019 27.3 6.8 84 32-123 150-234 (327)
153 3mqt_A Mandelate racemase/muco 44.9 32 0.0011 29.5 5.5 69 50-118 241-311 (394)
154 2p3z_A L-rhamnonate dehydratas 44.7 77 0.0026 27.4 7.9 96 11-117 233-332 (415)
155 4dxk_A Mandelate racemase / mu 44.5 55 0.0019 28.1 6.9 70 50-119 250-321 (400)
156 3rcy_A Mandelate racemase/muco 44.4 32 0.0011 30.1 5.4 69 50-118 243-313 (433)
157 3noy_A 4-hydroxy-3-methylbut-2 44.0 82 0.0028 26.8 7.6 100 11-122 43-148 (366)
158 3tr9_A Dihydropteroate synthas 43.6 1.4E+02 0.0048 24.8 11.4 100 11-117 46-155 (314)
159 3fcp_A L-Ala-D/L-Glu epimerase 43.6 32 0.0011 29.4 5.2 73 50-122 233-307 (381)
160 3ijw_A Aminoglycoside N3-acety 43.5 25 0.00086 28.7 4.3 50 17-66 17-72 (268)
161 3rr1_A GALD, putative D-galact 43.1 70 0.0024 27.6 7.3 98 11-118 189-288 (405)
162 3vni_A Xylose isomerase domain 42.8 64 0.0022 25.7 6.8 46 74-119 21-70 (294)
163 3v5c_A Mandelate racemase/muco 42.6 58 0.002 27.9 6.7 79 32-118 227-313 (392)
164 3mcm_A 2-amino-4-hydroxy-6-hyd 42.6 72 0.0024 28.0 7.3 107 1-118 204-323 (442)
165 2q5c_A NTRC family transcripti 42.5 22 0.00076 27.3 3.7 66 46-116 80-148 (196)
166 3kws_A Putative sugar isomeras 42.2 54 0.0019 26.1 6.2 63 55-118 16-85 (287)
167 1vp8_A Hypothetical protein AF 42.2 76 0.0026 24.6 6.4 88 34-123 17-111 (201)
168 3stp_A Galactonate dehydratase 41.5 25 0.00086 30.5 4.3 97 11-117 241-339 (412)
169 2nyg_A YOKD protein; PFAM02522 41.3 31 0.0011 28.2 4.5 47 17-63 15-67 (273)
170 2qul_A D-tagatose 3-epimerase; 40.9 1.1E+02 0.0037 24.2 7.9 42 77-118 24-68 (290)
171 3tji_A Mandelate racemase/muco 40.3 37 0.0013 29.5 5.2 70 50-119 262-333 (422)
172 2pju_A Propionate catabolism o 40.2 64 0.0022 25.4 6.1 66 46-116 92-160 (225)
173 4a35_A Mitochondrial enolase s 39.8 1.1E+02 0.0037 26.7 8.1 81 33-117 272-357 (441)
174 3go2_A Putative L-alanine-DL-g 39.5 41 0.0014 29.1 5.3 65 50-116 251-318 (409)
175 3va8_A Probable dehydratase; e 38.6 40 0.0014 29.6 5.1 83 34-122 263-347 (445)
176 3ugv_A Enolase; enzyme functio 38.5 42 0.0014 28.8 5.1 70 50-119 259-330 (390)
177 4g8t_A Glucarate dehydratase; 38.2 18 0.0006 32.1 2.7 73 50-122 290-363 (464)
178 3vcn_A Mannonate dehydratase; 38.1 17 0.00057 31.8 2.6 68 52-119 269-338 (425)
179 2okt_A OSB synthetase, O-succi 37.9 26 0.0009 29.4 3.7 86 32-122 191-277 (342)
180 3vdg_A Probable glucarate dehy 36.1 48 0.0016 29.1 5.2 83 34-122 265-349 (445)
181 1pii_A N-(5'phosphoribosyl)ant 36.0 58 0.002 28.7 5.7 63 25-91 272-335 (452)
182 3sma_A FRBF; N-acetyl transfer 34.9 65 0.0022 26.5 5.5 51 17-67 24-80 (286)
183 4hv0_A AVTR; ribbon-helix-heli 34.5 57 0.002 22.3 4.1 27 155-181 8-34 (106)
184 3tcs_A Racemase, putative; PSI 34.1 66 0.0023 27.5 5.7 69 50-118 239-309 (388)
185 3qxb_A Putative xylose isomera 33.8 1.3E+02 0.0045 24.2 7.4 54 64-117 21-90 (316)
186 3dx5_A Uncharacterized protein 33.8 87 0.003 24.7 6.2 52 100-170 87-138 (286)
187 3vc5_A Mandelate racemase/muco 33.6 51 0.0017 28.9 4.9 83 34-122 260-344 (441)
188 3qc0_A Sugar isomerase; TIM ba 33.5 35 0.0012 26.9 3.6 22 149-170 117-138 (275)
189 2hk0_A D-psicose 3-epimerase; 32.8 85 0.0029 25.3 6.0 40 80-119 46-88 (309)
190 4abx_A DNA repair protein RECN 32.6 52 0.0018 24.7 4.3 31 145-175 119-149 (175)
191 2gwg_A 4-oxalomesaconate hydra 31.4 2.2E+02 0.0074 23.4 8.5 71 49-119 92-181 (350)
192 3ngf_A AP endonuclease, family 31.2 1.9E+02 0.0064 22.6 9.0 53 63-117 11-68 (269)
193 1wue_A Mandelate racemase/muco 30.4 39 0.0013 28.8 3.6 87 32-122 227-315 (386)
194 2jwk_A Protein TOLR; periplasm 30.2 36 0.0012 21.1 2.6 47 11-61 27-73 (74)
195 2a6c_A Helix-turn-helix motif; 29.6 44 0.0015 21.2 3.0 27 155-181 18-44 (83)
196 2r14_A Morphinone reductase; H 29.6 61 0.0021 27.7 4.7 70 18-90 258-328 (377)
197 1z41_A YQJM, probable NADH-dep 29.5 1.3E+02 0.0043 25.1 6.6 70 20-89 234-306 (338)
198 2zvr_A Uncharacterized protein 29.3 1.4E+02 0.0049 23.6 6.8 38 81-118 52-89 (290)
199 3dxi_A Putative aldolase; TIM 29.0 2.5E+02 0.0085 23.3 9.1 108 8-116 18-133 (320)
200 4h2h_A Mandelate racemase/muco 29.0 53 0.0018 27.9 4.2 73 50-122 233-307 (376)
201 1wa3_A 2-keto-3-deoxy-6-phosph 29.0 1.3E+02 0.0046 22.5 6.3 88 12-115 20-109 (205)
202 3f6p_A Transcriptional regulat 28.3 1.1E+02 0.0039 20.1 5.3 21 50-70 62-82 (120)
203 2o7s_A DHQ-SDH PR, bifunctiona 28.0 1.8E+02 0.0062 25.8 7.7 60 10-70 75-159 (523)
204 3kto_A Response regulator rece 27.7 1.4E+02 0.0047 20.2 5.7 68 22-92 41-112 (136)
205 3kz3_A Repressor protein CI; f 27.4 59 0.002 20.3 3.3 52 156-207 13-66 (80)
206 3gl9_A Response regulator; bet 27.4 1.4E+02 0.0047 19.8 5.9 60 25-87 40-103 (122)
207 3lte_A Response regulator; str 27.4 81 0.0028 21.1 4.4 13 16-28 18-30 (132)
208 3ose_A Serine/threonine-protei 27.3 47 0.0016 23.4 3.0 26 7-32 33-58 (120)
209 3cyj_A Mandelate racemase/muco 27.3 2.7E+02 0.0094 23.2 9.9 98 11-119 199-300 (372)
210 2pge_A MENC; OSBS, NYSGXRC, PS 27.2 42 0.0014 28.5 3.2 73 50-122 248-324 (377)
211 3ro6_B Putative chloromuconate 26.8 2.7E+02 0.0094 23.1 9.2 73 50-122 224-299 (356)
212 3fnr_A Arginyl-tRNA synthetase 26.4 87 0.003 27.6 5.2 44 14-62 145-188 (464)
213 3p0w_A Mandelate racemase/muco 26.3 45 0.0015 29.5 3.3 71 50-120 288-359 (470)
214 1vyr_A Pentaerythritol tetrani 26.2 2.2E+02 0.0077 23.9 7.6 66 20-89 256-322 (364)
215 3rfa_A Ribosomal RNA large sub 25.4 3.2E+02 0.011 23.4 9.0 88 35-122 232-350 (404)
216 1sfl_A 3-dehydroquinate dehydr 25.3 2.5E+02 0.0084 22.0 8.3 55 10-70 79-133 (238)
217 2uyg_A 3-dehydroquinate dehydr 25.1 1.5E+02 0.0051 21.8 5.4 78 11-95 24-104 (149)
218 2h9a_B CO dehydrogenase/acetyl 25.1 2.9E+02 0.0099 22.8 8.0 86 26-118 85-181 (310)
219 3v7e_A Ribosome-associated pro 24.9 1.4E+02 0.0048 19.1 4.9 58 53-117 3-60 (82)
220 3kht_A Response regulator; PSI 24.9 1.4E+02 0.0047 20.3 5.3 13 16-28 17-29 (144)
221 3g8r_A Probable spore coat pol 24.8 46 0.0016 28.3 3.0 71 44-120 18-100 (350)
222 2k9i_A Plasmid PRN1, complete 24.6 1.1E+02 0.0036 17.5 4.3 23 155-177 19-41 (55)
223 4e4f_A Mannonate dehydratase; 24.4 1.1E+02 0.0036 26.6 5.3 69 50-118 268-338 (426)
224 2cpg_A REPA protein, transcrip 24.3 96 0.0033 16.9 4.1 22 155-176 12-33 (45)
225 3mzn_A Glucarate dehydratase; 24.1 44 0.0015 29.4 2.8 71 50-120 270-341 (450)
226 1i60_A IOLI protein; beta barr 24.0 1.8E+02 0.0063 22.4 6.5 99 51-170 18-138 (278)
227 3gt7_A Sensor protein; structu 23.9 1.8E+02 0.0063 20.1 6.8 67 23-92 43-113 (154)
228 3hgj_A Chromate reductase; TIM 23.9 1.2E+02 0.004 25.5 5.4 23 45-68 237-259 (349)
229 1jbe_A Chemotaxis protein CHEY 23.8 1.6E+02 0.0055 19.3 6.8 9 31-39 49-57 (128)
230 3l23_A Sugar phosphate isomera 23.7 2.8E+02 0.0096 22.2 9.1 49 100-170 111-159 (303)
231 3nhm_A Response regulator; pro 23.7 86 0.0029 21.0 3.9 39 30-71 46-87 (133)
232 3j21_Z 50S ribosomal protein L 23.6 1.7E+02 0.0057 19.5 5.6 61 49-116 3-63 (99)
233 3pfr_A Mandelate racemase/muco 23.6 49 0.0017 29.1 3.0 70 50-119 273-343 (455)
234 4h83_A Mandelate racemase/muco 23.6 77 0.0026 27.0 4.2 81 33-116 236-318 (388)
235 3k6j_A Protein F01G10.3, confi 23.2 3.5E+02 0.012 23.7 8.4 50 31-80 130-179 (460)
236 3gr7_A NADPH dehydrogenase; fl 23.1 1.7E+02 0.0057 24.5 6.2 39 51-89 267-306 (340)
237 3gka_A N-ethylmaleimide reduct 23.1 1.7E+02 0.0059 24.7 6.3 63 18-89 253-315 (361)
238 3lmz_A Putative sugar isomeras 23.0 1.6E+02 0.0055 22.8 5.8 92 22-119 37-134 (257)
239 1vli_A Spore coat polysacchari 23.0 53 0.0018 28.3 3.0 72 41-120 38-123 (385)
240 2c71_A Glycoside hydrolase, fa 22.7 1.7E+02 0.0058 22.4 5.8 54 3-61 125-180 (216)
241 4hnl_A Mandelate racemase/muco 22.6 53 0.0018 28.4 3.0 71 50-120 261-333 (421)
242 2gou_A Oxidoreductase, FMN-bin 22.6 2.9E+02 0.0098 23.2 7.6 65 19-90 254-322 (365)
243 1wv2_A Thiazole moeity, thiazo 22.5 3.1E+02 0.011 22.2 12.0 71 10-81 83-155 (265)
244 3h87_C Putative uncharacterize 22.5 1.6E+02 0.0054 18.8 5.8 57 155-215 12-69 (73)
245 3aam_A Endonuclease IV, endoiv 22.5 2.7E+02 0.0093 21.5 7.9 20 100-119 52-72 (270)
246 3l5l_A Xenobiotic reductase A; 22.5 1.6E+02 0.0055 24.8 6.0 22 46-68 245-266 (363)
247 1li5_A Cysrs, cysteinyl-tRNA s 22.4 91 0.0031 27.4 4.5 45 14-62 90-134 (461)
248 3t6k_A Response regulator rece 22.4 1.7E+02 0.0058 19.7 5.3 13 16-28 16-28 (136)
249 3cuq_C Vacuolar protein-sortin 21.9 1.4E+02 0.0046 22.6 4.8 39 2-40 60-102 (176)
250 3tc3_A UV damage endonuclease; 21.9 1.6E+02 0.0056 24.4 5.7 54 100-169 63-116 (310)
251 3cny_A Inositol catabolism pro 21.8 1.3E+02 0.0044 23.8 5.2 32 82-116 43-74 (301)
252 4ab4_A Xenobiotic reductase B; 21.6 2E+02 0.0067 24.3 6.4 63 18-89 245-307 (362)
253 3fxg_A Rhamnonate dehydratase; 21.5 1E+02 0.0036 27.1 4.7 69 50-118 256-327 (455)
254 3q9s_A DNA-binding response re 21.5 1.7E+02 0.0057 22.7 5.6 61 30-93 80-141 (249)
255 1k68_A Phytochrome response re 21.5 1.8E+02 0.0063 19.2 6.3 49 30-81 54-106 (140)
256 1dw9_A Cyanate lyase; cyanate 21.4 98 0.0033 23.0 3.8 50 160-220 29-78 (156)
257 3ktc_A Xylose isomerase; putat 21.3 2.9E+02 0.0099 22.4 7.3 36 83-118 47-82 (333)
258 3obe_A Sugar phosphate isomera 21.3 3.2E+02 0.011 21.9 10.3 49 100-170 117-165 (305)
259 3f4w_A Putative hexulose 6 pho 21.2 1.2E+02 0.0039 23.0 4.5 85 25-115 20-108 (211)
260 2ox1_A 3-dehydroquinate dehydr 21.2 2.7E+02 0.0094 21.1 7.1 25 11-36 55-80 (196)
261 3cpk_A Uncharacterized protein 21.1 1.5E+02 0.0052 21.7 4.8 38 83-120 88-125 (150)
262 2hsa_B 12-oxophytodienoate red 21.1 2.8E+02 0.0097 23.7 7.3 70 18-90 263-348 (402)
263 4dlp_A Aminoacyl-tRNA syntheta 20.9 1E+02 0.0034 27.5 4.6 46 14-62 94-139 (536)
264 2lv7_A Calcium-binding protein 20.9 45 0.0015 22.3 1.8 33 191-223 51-83 (100)
265 3cnb_A DNA-binding response re 20.8 1.7E+02 0.006 19.5 5.1 11 16-26 20-30 (143)
266 2wqp_A Polysialic acid capsule 20.6 65 0.0022 27.3 3.1 81 34-120 20-113 (349)
267 3c8z_A Cysteinyl-tRNA syntheta 20.6 2.1E+02 0.0071 24.6 6.4 46 14-63 107-152 (414)
268 1icp_A OPR1, 12-oxophytodienoa 20.5 83 0.0028 26.8 3.8 70 18-90 259-330 (376)
269 3apt_A Methylenetetrahydrofola 20.4 3.6E+02 0.012 22.1 11.2 98 9-112 81-201 (310)
270 3en0_A Cyanophycinase; serine 20.3 98 0.0034 25.4 4.0 57 12-68 68-152 (291)
No 1
>3v0s_A Perakine reductase; AKR superfamily, oxidoreductase; HET: MLZ M3L MLY ATR; 1.77A {Rauvolfia serpentina} PDB: 3v0u_A 3v0t_A* 3uyi_A*
Probab=100.00 E-value=4.9e-53 Score=368.60 Aligned_cols=240 Identities=68% Similarity=1.142 Sum_probs=188.9
Q ss_pred CCCCCCHHHHHHHHHHHHhHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCcccEEeccCCcHHHHHHHhccCCcce
Q 025789 7 IGVKGSPEYVRKCCEASLKRLDVDYIDLYYQHRVDTSVSIEDTMGELKKLVEEGKIKYIGLSEASADTIRRAHAVHPITA 86 (248)
Q Consensus 7 ~~~~~s~~~i~~~~e~SL~rL~~d~iDl~~lH~~~~~~~~~~~~~~l~~l~~~G~ir~iGvS~~~~~~l~~~~~~~~~~~ 86 (248)
+..+++++.+++++++||+||||||||+|+||||+...+.+++|++|++|+++||||+||||||+++++++++...++++
T Consensus 95 ~~~~~~~~~i~~~~~~SL~rLg~dyiDl~~lH~p~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~ 174 (337)
T 3v0s_A 95 VKAXGTPDYVRSCCEASLKRLDVDYIDLFYIHRIDTTVPIEITMGELXXLVEEGKIXYVGLSEASPDTIRRAHAVHPVTA 174 (337)
T ss_dssp EEECCCHHHHHHHHHHHHHHHTCSCEEEEEESSCCTTSCHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHSCCCE
T ss_pred ccCCCCHHHHHHHHHHHHHHhCCCCeeEEEecCCCCCCCHHHHHHHHHHHHHCCCeeEEeccCCCHHHHHHHhccCCceE
Confidence 34578999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccccCCccccchhchHHHHHHcCCcEEeeccccccccccccccCCCCchhhhhcCCCCCchhhHHHHHHHHHHHHHHHH
Q 025789 87 VQMEYSLWTREIEDDIIPLCRELGIGIVAYSPLGRGFFAGKAVVESLPSESILAMHPRFSGENLEKNKLLYTRLETLAAK 166 (248)
Q Consensus 87 ~q~~~~~~~~~~~~~~~~~~~~~gi~v~~~~~l~~G~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ia~~ 166 (248)
+|++||++++..+.+++++|+++||++++|+||++|+|+|+.....++.++.+...|.|.....+......+.+.++|++
T Consensus 175 ~Q~~~~~~~~~~e~~l~~~~~~~gi~v~a~spL~~G~L~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ia~~ 254 (337)
T 3v0s_A 175 LQIEYSLWTRDIEDEIVPLCRQLGIGIVPYSPIGRGLFWGKAIKESLPENSVLTSHPRFVGENLEKNKQIYYRIEALSQK 254 (337)
T ss_dssp EEEECBTTBCGGGTTHHHHHHHHTCEEEEESTTHHHHHHHHHHHC-------------------------CHHHHHHHHH
T ss_pred EEeeccccccchhHHHHHHHHHcCceEEEeccccCcccCCCCCCCCCCCcchhhcccccchhhhhhHHHHHHHHHHHHHH
Confidence 99999999998777899999999999999999999999988444456666677777777777777778888999999999
Q ss_pred hCCCHHHHHHHHHHhCCCCceeecCCCChHhHHHhhcccCCCCCHHHHHHHHhhcCCCCCCCCCCCcccccccccccCCC
Q 025789 167 YGCTTPQLALAWLLHQGDDIVPIPGTTKITNLDNNIGSLALKLKEEDLKEICKTIPVDEVGGHRDYSNLSGYGYKFANTP 246 (248)
Q Consensus 167 ~~~s~~q~al~~~l~~~~v~~~i~G~~~~~~l~enl~a~~~~Lt~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (248)
+|+|++|+||+|+++++.|+++|+|+++++||++|+++++++||++++++|+++.+.....+.+|.....+..|.++.||
T Consensus 255 ~g~t~aqvaL~w~l~~~~v~~~I~g~~~~~~l~en~~a~~~~L~~e~~~~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 334 (337)
T 3v0s_A 255 HGCTPVQLALAWVLHQGEDVVPIPGTTKIKNLHNNVGALKVXLTKEDLKEISDAVPLDEVAGESIHEVIAVTNWKFANTP 334 (337)
T ss_dssp TTSCHHHHHHHHHHTTCTTBCCCCCCSCHHHHHHHHHGGGCCCCHHHHHHHHHTCC-----------------CTTCCCC
T ss_pred hCCCHHHHHHHHHHhCCCCeEEEcCCCCHHHHHHHHHHhccCCCHHHHHHHHHhhcccCCCCCCchHHHhhhhhhcCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999995447889999887
No 2
>1pyf_A IOLS protein; beta-alpha barrel, aldo-keto reductase, TIM barrel, oxidoreductase; 1.80A {Bacillus subtilis} SCOP: c.1.7.1 PDB: 1pz0_A*
Probab=100.00 E-value=3.9e-50 Score=346.96 Aligned_cols=215 Identities=31% Similarity=0.537 Sum_probs=198.6
Q ss_pred CCCCHHHHHHHHHHHHhHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCcccEEeccCCcHHHHHHHhccCCcceec
Q 025789 9 VKGSPEYVRKCCEASLKRLDVDYIDLYYQHRVDTSVSIEDTMGELKKLVEEGKIKYIGLSEASADTIRRAHAVHPITAVQ 88 (248)
Q Consensus 9 ~~~s~~~i~~~~e~SL~rL~~d~iDl~~lH~~~~~~~~~~~~~~l~~l~~~G~ir~iGvS~~~~~~l~~~~~~~~~~~~q 88 (248)
.+++++.+++++++||+||||||||+|+||||+...+.+++|++|++|+++||||+||||||++++++++++..+|+++|
T Consensus 96 ~~~~~~~i~~~~~~SL~rL~~dyiDl~~lH~p~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~Q 175 (312)
T 1pyf_A 96 FDNSPDFLKKSVDESLKRLNTDYIDLFYIHFPDEHTPKDEAVNALNEMKKAGKIRSIGVSNFSLEQLKEANKDGLVDVLQ 175 (312)
T ss_dssp ECCCHHHHHHHHHHHHHHHTSSCBSEEEECSCCSSSCHHHHHHHHHHHHHTTSBSCEEEESCCHHHHHHHTTTSCCCEEE
T ss_pred CCCCHHHHHHHHHHHHHHhCCCcEEEEEeCCCCCCCCHHHHHHHHHHHHHCCCcCEEEecCCCHHHHHHHHhhCCceEEe
Confidence 57899999999999999999999999999999988899999999999999999999999999999999999998999999
Q ss_pred cccCCccccchhchHHHHHHcCCcEEeeccccccccccccc-cCCCCchhhhhcCCCCCchhhHHHHHHHHHHHHHHHHh
Q 025789 89 MEYSLWTREIEDDIIPLCRELGIGIVAYSPLGRGFFAGKAV-VESLPSESILAMHPRFSGENLEKNKLLYTRLETLAAKY 167 (248)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~gi~v~~~~~l~~G~l~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ia~~~ 167 (248)
++||++++..+.+++++|+++||++++|+||++|+|+|+.. ...++.++.|...|.|..+.++..+...+.+.++|+++
T Consensus 176 ~~~~~~~~~~e~~l~~~~~~~gi~v~a~spL~~G~L~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~ia~~~ 255 (312)
T 1pyf_A 176 GEYNLLNREAEKTFFPYTKEHNISFIPYFPLVSGLLAGKYTEDTTFPEGDLRNEQEHFKGERFKENIRKVNKLAPIAEKH 255 (312)
T ss_dssp EECBTTBCGGGTTHHHHHHHHTCEEEEESTTTTTGGGTCCCTTCCCCTTCGGGGSGGGSHHHHHHHHHHHHTTHHHHHHT
T ss_pred ccCCccccchHHHHHHHHHHcCCeEEEecccccccccCCCCCCCCCCCcccccccccccchhHHHHHHHHHHHHHHHHHc
Confidence 99999999876689999999999999999999999999843 34456667776677777666677778889999999999
Q ss_pred CCCHHHHHHHHHHhCCCCceeecCCCChHhHHHhhcccCCCCCHHHHHHHHhhcCC
Q 025789 168 GCTTPQLALAWLLHQGDDIVPIPGTTKITNLDNNIGSLALKLKEEDLKEICKTIPV 223 (248)
Q Consensus 168 ~~s~~q~al~~~l~~~~v~~~i~G~~~~~~l~enl~a~~~~Lt~~~~~~l~~~~~~ 223 (248)
|+|++|+||+|++++|.|+++|+|+++++||++|+++++++||++++++|+++...
T Consensus 256 g~s~aqvaL~w~l~~~~v~~~I~g~~~~~~l~en~~a~~~~L~~~~~~~l~~~~~~ 311 (312)
T 1pyf_A 256 NVDIPHIVLAWYLARPEIDILIPGAKRADQLIDNIKTADVTLSQEDISFIDKLFAP 311 (312)
T ss_dssp TSCHHHHHHHHHHHSTTCCCBCCCCSSHHHHHHHHGGGGCCCCHHHHHHHHHHTCC
T ss_pred CCCHHHHHHHHHHhCCCCeEEEeCCCCHHHHHHHHhhccCCCCHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999999999999998753
No 3
>3n2t_A Putative oxidoreductase; aldo/keto reductase superfamily, AKR, AKR11B4, TIM barrel; 2.00A {Gluconobacter oxydans} SCOP: c.1.7.0
Probab=100.00 E-value=3.9e-50 Score=351.66 Aligned_cols=225 Identities=28% Similarity=0.441 Sum_probs=207.2
Q ss_pred CCCCHHHHHHHHHHHHhHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCcccEEeccCCcHHHHHHHhccCCcceec
Q 025789 9 VKGSPEYVRKCCEASLKRLDVDYIDLYYQHRVDTSVSIEDTMGELKKLVEEGKIKYIGLSEASADTIRRAHAVHPITAVQ 88 (248)
Q Consensus 9 ~~~s~~~i~~~~e~SL~rL~~d~iDl~~lH~~~~~~~~~~~~~~l~~l~~~G~ir~iGvS~~~~~~l~~~~~~~~~~~~q 88 (248)
.+++++.|++++++||+||||||||+|+||||+...+.+++|++|++|+++||||+||||||++++++++++..+|+++|
T Consensus 117 ~~~~~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~Q 196 (348)
T 3n2t_A 117 RDSRPARIRKEVEDSLRRLRVETIDLEQIHWPDDKTPIDESARELQKLHQDGKIRALGVSNFSPEQMDIFREVAPLATIQ 196 (348)
T ss_dssp ECCCHHHHHHHHHHHHHHHTCSSEEEEEESSCCTTSCHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHSCCCEEE
T ss_pred CCCCHHHHHHHHHHHHHHhCCCcEEEEEecCCCCCCCHHHHHHHHHHHHHhCcceEEecCCCCHHHHHHHHHhCCccEEE
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999988999999
Q ss_pred cccCCccccchhchHHHHHHcCCcEEeeccccccccccccc-cCCCCchhhhhcCCCCCchhhHHHHHHHHHHHHHHHHh
Q 025789 89 MEYSLWTREIEDDIIPLCRELGIGIVAYSPLGRGFFAGKAV-VESLPSESILAMHPRFSGENLEKNKLLYTRLETLAAKY 167 (248)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~gi~v~~~~~l~~G~l~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ia~~~ 167 (248)
++||++++..+.+++++|+++||++++|+||++|+|+|+.. ...++.++.+...|.|....++..++..+.+.++|+++
T Consensus 197 ~~~nl~~~~~e~~l~~~~~~~gi~v~a~spL~~G~Ltg~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~iA~~~ 276 (348)
T 3n2t_A 197 PPLNLFERTIEKDILPYAEKHNAVVLAYGALCRGLLTGKMNRDTTFPKDDLRSNDPKFQKPNFEKYLAAMDEFEKLAEKR 276 (348)
T ss_dssp CBCBTTBCGGGGTHHHHHHHHTCEEEEBCTTGGGGGGTCCCTTCCCCTTSGGGGCGGGSTTHHHHHHHHHHHHHHHHHHT
T ss_pred eeecCccCchHHHHHHHHHHcCCeEEEeecccCccccCCccCCCCCCCcchhhcccccchhhHHHHHHHHHHHHHHHHHh
Confidence 99999999877889999999999999999999999999843 34566667777777788888888889999999999999
Q ss_pred CCCHHHHHHHHHHhCCCCceeecCCCChHhHHHhhcccCCCCCHHHHHHHHhhcCCC--CCCCCCCCcc
Q 025789 168 GCTTPQLALAWLLHQGDDIVPIPGTTKITNLDNNIGSLALKLKEEDLKEICKTIPVD--EVGGHRDYSN 234 (248)
Q Consensus 168 ~~s~~q~al~~~l~~~~v~~~i~G~~~~~~l~enl~a~~~~Lt~~~~~~l~~~~~~~--~~~~~~~~~~ 234 (248)
|+|++|+||+|++++ .|+++|+|+++++||++|+++++++||++++++|+++.+.. .+.|++|...
T Consensus 277 g~t~aqvaL~w~l~~-~v~~~I~g~~~~~~l~enl~a~~~~L~~e~~~~l~~~~~~~~~~~~g~~~~~~ 344 (348)
T 3n2t_A 277 GKSVMAFAVRWVLDQ-GPVIALWGARKPGQVSGVKDVFGWSLTDEEKKAVDDILARHVPNPIDPTFMAP 344 (348)
T ss_dssp TCCHHHHHHHHHHTT-TTEEEEEECSSGGGGTTHHHHSSCCCCHHHHHHHHHHHHHHSCCCCCSSCCC-
T ss_pred CCCHHHHHHHHHHHC-CCcEEEeCCCCHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccCCCCccccCC
Confidence 999999999999999 78999999999999999999999999999999999998865 5667777654
No 4
>1pz1_A GSP69, general stress protein 69; beta-alpha barrel, aldo-keto reductase, TIM barrel, oxidoreductase; HET: NAP; 2.20A {Bacillus subtilis} SCOP: c.1.7.1
Probab=100.00 E-value=1.1e-49 Score=346.86 Aligned_cols=222 Identities=28% Similarity=0.439 Sum_probs=201.7
Q ss_pred CCCHHHHHHHHHHHHhHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCcccEEeccCCcHHHHHHHhccCCcceecc
Q 025789 10 KGSPEYVRKCCEASLKRLDVDYIDLYYQHRVDTSVSIEDTMGELKKLVEEGKIKYIGLSEASADTIRRAHAVHPITAVQM 89 (248)
Q Consensus 10 ~~s~~~i~~~~e~SL~rL~~d~iDl~~lH~~~~~~~~~~~~~~l~~l~~~G~ir~iGvS~~~~~~l~~~~~~~~~~~~q~ 89 (248)
+++++.+++++++||+||||||||+|+||||+...+.+++|++|++|+++||||+||||||++++++++++..+|+++|+
T Consensus 97 ~~~~~~i~~~~~~SL~rLg~dyiDl~~lH~p~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~Q~ 176 (333)
T 1pz1_A 97 HANRARIVEEVENSLKRLQTDYIDLYQVHWPDPLVPIEETAEVMKELYDAGKIRAIGVSNFSIEQMDTFRAVAPLHTIQP 176 (333)
T ss_dssp CCCHHHHHHHHHHHHHHTTSSCBSEEEECSCCTTSCHHHHHHHHHHHHHTTSBSCEEECSCCHHHHHHHHTTSCCCEECC
T ss_pred CCCHHHHHHHHHHHHHHhCCCceeEEEecCCCCCCCHHHHHHHHHHHHHCCcCCEEEecCCCHHHHHHHHhcCCcEEEec
Confidence 67999999999999999999999999999999888999999999999999999999999999999999999999999999
Q ss_pred ccCCccccchhchHHHHHHcCCcEEeeccccccccccccc-cCCCCchhhhhcCCCCCchhhHHHHHHHHHHHHHHHHhC
Q 025789 90 EYSLWTREIEDDIIPLCRELGIGIVAYSPLGRGFFAGKAV-VESLPSESILAMHPRFSGENLEKNKLLYTRLETLAAKYG 168 (248)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~gi~v~~~~~l~~G~l~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ia~~~~ 168 (248)
+||++++..+.+++++|+++||++++|+||++|+|+|+.. ...+++.+.|...|.|....+....+..+.+.++|+++|
T Consensus 177 ~~nl~~~~~e~~l~~~~~~~gi~v~a~spL~~G~Ltg~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~ia~~~g 256 (333)
T 1pz1_A 177 PYNLFEREMEESVLPYAKDNKITTLLYGSLCRGLLTGKMTEEYTFEGDDLRNHDPKFQKPRFKEYLSAVNQLDKLAKTRY 256 (333)
T ss_dssp BCBTTBCGGGGTHHHHHHHTTCEEEEBCTTGGGTTSSCCCTTCCCCTTCGGGSCGGGSTTTHHHHHHHHHHHHHHHHHHH
T ss_pred cccCccCchHHHHHHHHHHcCceEEEeecccCCccCCCccccccCCCccccccccccchhhHHHHHHHHHHHHHHHHHhC
Confidence 9999999876789999999999999999999999999843 233444555555566666667778888899999999999
Q ss_pred C-CHHHHHHHHHHhCCCCceeecCCCChHhHHHhhcccCCCCCHHHHHHHHhhcCCC--CCCCCCC
Q 025789 169 C-TTPQLALAWLLHQGDDIVPIPGTTKITNLDNNIGSLALKLKEEDLKEICKTIPVD--EVGGHRD 231 (248)
Q Consensus 169 ~-s~~q~al~~~l~~~~v~~~i~G~~~~~~l~enl~a~~~~Lt~~~~~~l~~~~~~~--~~~~~~~ 231 (248)
+ |++|+||+|+++++.|+++|+|+++++||++|+++++++||++++++|+++.... .+.+.+|
T Consensus 257 ~~s~aqvaL~w~l~~~~v~~vI~g~~~~~~l~en~~a~~~~L~~e~~~~l~~~~~~~~~~~~g~~~ 322 (333)
T 1pz1_A 257 GKSVIHLAVRWILDQPGADIALWGARKPGQLEALSEITGWTLNSEDQKDINTILENTISDPVGPEF 322 (333)
T ss_dssp SCCHHHHHHHHHHTSTTCCEEEEECCSGGGGTTCTTSSSCCCCHHHHHHHHHHHHHHCSSCCCSGG
T ss_pred CCCHHHHHHHHHHhCCCCeEEEeCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHhhcccCCccccc
Confidence 9 9999999999999999999999999999999999999999999999999998765 5566666
No 5
>3erp_A Putative oxidoreductase; funded by the national institute of allergy and infectious D of NIH contract number HHSN272200700058C; 1.55A {Salmonella enterica subsp}
Probab=100.00 E-value=2.5e-47 Score=334.40 Aligned_cols=212 Identities=31% Similarity=0.529 Sum_probs=181.1
Q ss_pred CCCCHHHHHHHHHHHHhHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCcccEEeccCCcHHHHHHHhcc-----CC
Q 025789 9 VKGSPEYVRKCCEASLKRLDVDYIDLYYQHRVDTSVSIEDTMGELKKLVEEGKIKYIGLSEASADTIRRAHAV-----HP 83 (248)
Q Consensus 9 ~~~s~~~i~~~~e~SL~rL~~d~iDl~~lH~~~~~~~~~~~~~~l~~l~~~G~ir~iGvS~~~~~~l~~~~~~-----~~ 83 (248)
...+++.+++++++||+||||||||+|+||||+...+.+++|++|++|+++||||+||||||++++++++... .+
T Consensus 130 ~~~s~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~~~~~e~~~aL~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~ 209 (353)
T 3erp_A 130 DWGSRKYLIASLDQSLKRMGLEYVDIFYHHRPDPETPLKETMKALDHLVRHGKALYVGISNYPADLARQAIDILEDLGTP 209 (353)
T ss_dssp STTCHHHHHHHHHHHHHHHTCSCEEEEEECSCCTTSCHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHHHHHTCC
T ss_pred CCCCHHHHHHHHHHHHHHhCCCeEeEEEecCCCCCCCHHHHHHHHHHHHHCCCccEEEecCCCHHHHHHHHHHHHHcCCC
Confidence 3458999999999999999999999999999999999999999999999999999999999999999887653 68
Q ss_pred cceeccccCCccccchhchHHHHHHcCCcEEeeccccccccccccccCCCCchhhhhc-CCCCCchh-hHHHHHHHHHHH
Q 025789 84 ITAVQMEYSLWTREIEDDIIPLCRELGIGIVAYSPLGRGFFAGKAVVESLPSESILAM-HPRFSGEN-LEKNKLLYTRLE 161 (248)
Q Consensus 84 ~~~~q~~~~~~~~~~~~~~~~~~~~~gi~v~~~~~l~~G~l~g~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~l~ 161 (248)
++++|++||++++..+.+++++|+++||++++|+||++|+|+|++... .+.+..... .+.|.+.. .+..++..+.+.
T Consensus 210 ~~~~Q~~~~~~~~~~e~~ll~~~~~~gI~v~a~spL~~G~Ltg~~~~~-~p~~~r~~~~~~~~~~~~~~~~~~~~~~~l~ 288 (353)
T 3erp_A 210 CLIHQPKYSLFERWVEDGLLALLQEKGVGSIAFSPLAGGQLTDRYLNG-IPEDSRAASGSRFLKPEQITADKLEKVRRLN 288 (353)
T ss_dssp EEEEECBCBTTBCGGGGTHHHHHHHHTCEEEEBSTTGGGTSSGGGTC--------------------CCHHHHHHHHHHH
T ss_pred eEEeeccccccccchhhHHHHHHHHcCCeEEEeccccccccCCCccCC-CCCcccccccccccccccccHHHHHHHHHHH
Confidence 999999999999987778999999999999999999999999985433 332222111 11232222 234677888999
Q ss_pred HHHHHhCCCHHHHHHHHHHhCCCCceeecCCCChHhHHHhhccc-CCCCCHHHHHHHHhhc
Q 025789 162 TLAAKYGCTTPQLALAWLLHQGDDIVPIPGTTKITNLDNNIGSL-ALKLKEEDLKEICKTI 221 (248)
Q Consensus 162 ~ia~~~~~s~~q~al~~~l~~~~v~~~i~G~~~~~~l~enl~a~-~~~Lt~~~~~~l~~~~ 221 (248)
++|+++|+|++|+||+|+++++.|+++|+|+++++||++|++++ +++||++++++|+++.
T Consensus 289 ~iA~~~g~t~aqvaL~w~l~~~~v~~vI~G~~~~~~l~enl~a~~~~~Ls~ee~~~i~~~~ 349 (353)
T 3erp_A 289 ELAARRGQKLSQMALAWVLRNDNVTSVLIGASKPSQIEDAVGMLANRRFSAAECAEIDAIL 349 (353)
T ss_dssp HHHHHTTCCHHHHHHHHHTTTSCCCEEEECCSSHHHHHHHHHGGGGCCCCHHHHHHHHHHH
T ss_pred HHHHHhCCCHHHHHHHHHHhCCCCcEEEeCCCCHHHHHHHHHHhccCCCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999 8899999999999987
No 6
>3n6q_A YGHZ aldo-keto reductase; TIM barrel, oxidoreductase; 1.80A {Escherichia coli} SCOP: c.1.7.0 PDB: 4ast_A 4aub_A*
Probab=100.00 E-value=2.2e-47 Score=334.05 Aligned_cols=221 Identities=27% Similarity=0.500 Sum_probs=182.6
Q ss_pred CCCCHHHHHHHHHHHHhHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCcccEEeccCCcHHHHHHHhcc-----CC
Q 025789 9 VKGSPEYVRKCCEASLKRLDVDYIDLYYQHRVDTSVSIEDTMGELKKLVEEGKIKYIGLSEASADTIRRAHAV-----HP 83 (248)
Q Consensus 9 ~~~s~~~i~~~~e~SL~rL~~d~iDl~~lH~~~~~~~~~~~~~~l~~l~~~G~ir~iGvS~~~~~~l~~~~~~-----~~ 83 (248)
.+.+++.|++++++||+||||||||+|+||||+...+.+++|++|++|+++||||+||||||++++++++... .+
T Consensus 109 ~~~s~~~i~~~~e~SL~rL~~dyiDl~~lH~p~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~ 188 (346)
T 3n6q_A 109 SGGSRKYLLASLDQSLKRMGLEYVDIFYSHRVDENTPMEETASALAHAVQSGKALYVGISSYSPERTQKMVELLREWKIP 188 (346)
T ss_dssp SSSCHHHHHHHHHHHHHHHTCSCEEEEEECSCCTTSCHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHHHTTTCC
T ss_pred CCCCHHHHHHHHHHHHHHhCCCcEeEEEEeCCCCCCCHHHHHHHHHHHHHcCCeeEEEeCCCCHHHHHHHHHHHHHcCCC
Confidence 4459999999999999999999999999999999999999999999999999999999999999999886553 67
Q ss_pred cceeccccCCccccchh-chHHHHHHcCCcEEeeccccccccccccccCCCCchhhhhcCCC-----CCch-hhHHHHHH
Q 025789 84 ITAVQMEYSLWTREIED-DIIPLCRELGIGIVAYSPLGRGFFAGKAVVESLPSESILAMHPR-----FSGE-NLEKNKLL 156 (248)
Q Consensus 84 ~~~~q~~~~~~~~~~~~-~~~~~~~~~gi~v~~~~~l~~G~l~g~~~~~~~~~~~~~~~~~~-----~~~~-~~~~~~~~ 156 (248)
++++|++||++++..+. +++++|+++||++++|+||++|+|+|++... .+.+. +...+. |.+. ..+..++.
T Consensus 189 ~~~~Q~~~~l~~~~~~~~~l~~~~~~~gi~v~a~spL~~G~L~g~~~~~-~~~~~-r~~~~~~~~~~~~~~~~~~~~~~~ 266 (346)
T 3n6q_A 189 LLIHQPSYNLLNRWVDKSGLLDTLQNNGVGCIAFTPLAQGLLTGKYLNG-IPQDS-RMHREGNKVRGLTPKMLTEANLNS 266 (346)
T ss_dssp CCEEECBCBTTBCHHHHTTHHHHHHHHTCEEEEBSTTGGGGGGTSCC-------------------------CCHHHHHH
T ss_pred eEEEeccCchhhcCcchhhHHHHHHHcCCeEEEeccccCeecCCCccCC-CCCcc-ccccccccccccchhhhhHHHHHH
Confidence 88999999999987655 8999999999999999999999999984332 22211 111110 2221 12456778
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHHhCCCCceeecCCCChHhHHHhhccc-CCCCCHHHHHHHHhhcCCCCCCCCCCCcc
Q 025789 157 YTRLETLAAKYGCTTPQLALAWLLHQGDDIVPIPGTTKITNLDNNIGSL-ALKLKEEDLKEICKTIPVDEVGGHRDYSN 234 (248)
Q Consensus 157 ~~~l~~ia~~~~~s~~q~al~~~l~~~~v~~~i~G~~~~~~l~enl~a~-~~~Lt~~~~~~l~~~~~~~~~~~~~~~~~ 234 (248)
.+.+.++|+++|+|++|+||+|++++|.|+++|+|+++++||++|++++ +++||++++++|+++.+. .+..||.+
T Consensus 267 ~~~l~~iA~~~g~t~aqvaL~w~l~~~~v~~~I~g~~~~~~l~en~~a~~~~~Ls~e~~~~i~~~~~~---~~~~~w~~ 342 (346)
T 3n6q_A 267 LRLLNEMAQQRGQSMAQMALSWLLKDDRVTSVLIGASRAEQLEENVQALNNLTFSTKELAQIDQHIAD---GELNLWQA 342 (346)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHHHTSSTTCSEEEECCSSHHHHHHHHGGGGCCCCCHHHHHHHHHHHHH---TTCC----
T ss_pred HHHHHHHHHHhCcCHHHHHHHHHHhCCCCcEEEcCCCCHHHHHHHHhhccCCCCCHHHHHHHHHHHhc---cCCcchhh
Confidence 8899999999999999999999999999999999999999999999998 689999999999999864 34556654
No 7
>1lqa_A TAS protein; TIM barrel, structure 2 function project, S2F, structural GE oxidoreductase; HET: NDP; 1.60A {Escherichia coli} SCOP: c.1.7.1
Probab=100.00 E-value=3.7e-47 Score=332.68 Aligned_cols=214 Identities=31% Similarity=0.418 Sum_probs=186.3
Q ss_pred CCCCHHHHHHHHHHHHhHcCCCcccEEEeccCC---------------C--CCCHHHHHHHHHHHHHcCcccEEeccCCc
Q 025789 9 VKGSPEYVRKCCEASLKRLDVDYIDLYYQHRVD---------------T--SVSIEDTMGELKKLVEEGKIKYIGLSEAS 71 (248)
Q Consensus 9 ~~~s~~~i~~~~e~SL~rL~~d~iDl~~lH~~~---------------~--~~~~~~~~~~l~~l~~~G~ir~iGvS~~~ 71 (248)
.+++++.+++++++||+||||||||+|+||||. . ..+.+++|++|++|+++||||+||||||+
T Consensus 103 ~~~~~~~i~~~~~~SL~rL~~dyiDl~~lH~p~~~~~~~~~~~~~~~d~~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~ 182 (346)
T 1lqa_A 103 QALDRKNIREALHDSLKRLQTDYLDLYQVHWPQRPTNCFGKLGYSWTDSAPAVSLLDTLDALAEYQRAGKIRYIGVSNET 182 (346)
T ss_dssp CCSSHHHHHHHHHHHHHHHTSSCEEEEEECSCSSCCSCTTCCSCCCCSSCCSSCHHHHHHHHHHHHHTTSEEEEEEESCC
T ss_pred CCCCHHHHHHHHHHHHHHhCCCceeEEEecCccccccccccccccccccccCCCHHHHHHHHHHHHHcCCeEEEEecCCC
Confidence 358999999999999999999999999999993 3 45789999999999999999999999999
Q ss_pred HHHHHHHhc------cCCcceeccccCCccccchhchHHHHHHcCCcEEeeccccccccccccccCCCCchhhhhcCCCC
Q 025789 72 ADTIRRAHA------VHPITAVQMEYSLWTREIEDDIIPLCRELGIGIVAYSPLGRGFFAGKAVVESLPSESILAMHPRF 145 (248)
Q Consensus 72 ~~~l~~~~~------~~~~~~~q~~~~~~~~~~~~~~~~~~~~~gi~v~~~~~l~~G~l~g~~~~~~~~~~~~~~~~~~~ 145 (248)
+.++++++. ..+++++|++||++++..+.+++++|+++||++++|+||++|+|+|+......|.++.+...+.|
T Consensus 183 ~~~l~~~~~~~~~~~~~~~~~~Q~~~~l~~~~~~~~l~~~~~~~gi~v~a~spL~~G~L~g~~~~~~~p~~~~~~~~~~~ 262 (346)
T 1lqa_A 183 AFGVMRYLHLADKHDLPRIVTIQNPYSLLNRSFEVGLAEVSQYEGVELLAYSCLGFGTLTGKYLNGAKPAGARNTLFSRF 262 (346)
T ss_dssp HHHHHHHHHHHHHHTCCCCCEEEEECBTTBCTHHHHHHHHHHHHCCEEEEECTTGGGGGGTTTGGGCCCTTCHHHHCTTC
T ss_pred HHHHHHHHHHHHHcCCCCceEEeccCChhhchhHHHHHHHHHHcCCeEEEecchhhhhhcCccccccCCCcchhhcchhh
Confidence 988776543 25799999999999998767899999999999999999999999988443334443333334445
Q ss_pred CchhhHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHhCCCCceeecCCCChHhHHHhhcccCCCCCHHHHHHHHhhcC
Q 025789 146 SGENLEKNKLLYTRLETLAAKYGCTTPQLALAWLLHQGDDIVPIPGTTKITNLDNNIGSLALKLKEEDLKEICKTIP 222 (248)
Q Consensus 146 ~~~~~~~~~~~~~~l~~ia~~~~~s~~q~al~~~l~~~~v~~~i~G~~~~~~l~enl~a~~~~Lt~~~~~~l~~~~~ 222 (248)
.....+...+..+.+.++|+++|+|++|+||+|+++++.|+++|+|+++++||++|+++++++||++++++|+++.+
T Consensus 263 ~~~~~~~~~~~~~~l~~ia~~~g~s~aqvaL~w~l~~~~v~~~I~g~~~~~~l~enl~a~~~~L~~e~~~~l~~~~~ 339 (346)
T 1lqa_A 263 TRYSGEQTQKAVAAYVDIARRHGLDPAQMALAFVRRQPFVASTLLGATTMDQLKTNIESLHLELSEDVLAEIEAVHQ 339 (346)
T ss_dssp CTTCSHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHTCTTEEEEEECCSSHHHHHHHHGGGGCCCCHHHHHHHHHHHH
T ss_pred cccccHHHHHHHHHHHHHHHHHCcCHHHHHHHHHHhCCCCeEEEeCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHh
Confidence 44445667788899999999999999999999999999999999999999999999999999999999999999865
No 8
>3eau_A Voltage-gated potassium channel subunit beta-2; kvbeta, cortisone, NADPH, cytoplasm, ION transport, ionic channel, NADP, phosphoprotein; HET: NDP PDN; 1.82A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 2r9r_A* 2a79_A* 3lnm_A* 1exb_A* 3eb4_A* 3eb3_A* 1qrq_A* 1zsx_A*
Probab=100.00 E-value=5.1e-47 Score=329.43 Aligned_cols=215 Identities=28% Similarity=0.445 Sum_probs=185.6
Q ss_pred CCCCHHHHHHHHHHHHhHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCcccEEeccCCcHHHHHHHhcc------C
Q 025789 9 VKGSPEYVRKCCEASLKRLDVDYIDLYYQHRVDTSVSIEDTMGELKKLVEEGKIKYIGLSEASADTIRRAHAV------H 82 (248)
Q Consensus 9 ~~~s~~~i~~~~e~SL~rL~~d~iDl~~lH~~~~~~~~~~~~~~l~~l~~~G~ir~iGvS~~~~~~l~~~~~~------~ 82 (248)
.+++++.+++++++||+||||||||+|+||||+...+.+++|++|++|+++||||+||||||++.+++++... .
T Consensus 95 ~~~s~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~ 174 (327)
T 3eau_A 95 RGLSRKHIIEGLKASLERLQLEYVDVVFANRPDPNTPMEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAYSVARQFNLI 174 (327)
T ss_dssp BSSSHHHHHHHHHHHHHHHTCSCEEEEEESSCCTTSCHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHHHHTTCC
T ss_pred CCCCHHHHHHHHHHHHHHhCCCccceEEEeCCCCCCCHHHHHHHHHHHHHcCCeeEEeecCCCHHHHHHHHHHHHHcCCC
Confidence 4679999999999999999999999999999999999999999999999999999999999999999887653 5
Q ss_pred CcceeccccCCccccc-hhchHHHHHHcCCcEEeeccccccccccccccCCCCchhhhhcCCCC-------CchhhHHHH
Q 025789 83 PITAVQMEYSLWTREI-EDDIIPLCRELGIGIVAYSPLGRGFFAGKAVVESLPSESILAMHPRF-------SGENLEKNK 154 (248)
Q Consensus 83 ~~~~~q~~~~~~~~~~-~~~~~~~~~~~gi~v~~~~~l~~G~l~g~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~ 154 (248)
+++++|++||++++.. +.+++++|+++||++++|+||++|+|+|+.... .+.. .+...+.| ..+...+..
T Consensus 175 ~~~~~Q~~~~~~~~~~~~~~l~~~~~~~gi~v~a~spL~~G~Ltg~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 252 (327)
T 3eau_A 175 PPICEQAEYHMFQREKVEVQLPELFHKIGVGAMTWSPLACGIVSGKYDSG-IPPY-SRASLKGYQWLKDKILSEEGRRQQ 252 (327)
T ss_dssp CCCEEEEECBTTBCHHHHHHHHHHHHHHCCEEEEECTTGGGGGGTTTTTS-CCTT-SGGGSTTCHHHHHHHHSHHHHHHH
T ss_pred CceeecccccccccchhHhhHHHHHHHcCCeEEEeccccCceecCcccCC-CCCC-cccccccccccccccccchhHHHH
Confidence 8899999999999863 357899999999999999999999999985432 2221 22211111 112233456
Q ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHhCCCCceeecCCCChHhHHHhhcccCC--CCCHHHHHHHHhhcCCCC
Q 025789 155 LLYTRLETLAAKYGCTTPQLALAWLLHQGDDIVPIPGTTKITNLDNNIGSLAL--KLKEEDLKEICKTIPVDE 225 (248)
Q Consensus 155 ~~~~~l~~ia~~~~~s~~q~al~~~l~~~~v~~~i~G~~~~~~l~enl~a~~~--~Lt~~~~~~l~~~~~~~~ 225 (248)
...+.+.++|+++|+|++|+||+|+++++.|+++|+|+++++||++|++++++ +||++++++|+++.+..+
T Consensus 253 ~~~~~l~~ia~~~g~s~aqvaL~w~l~~~~v~~vI~g~~~~~~l~en~~a~~~~~~L~~e~~~~i~~~~~~~p 325 (327)
T 3eau_A 253 AKLKELQAIAERLGCTLPQLAIAWCLRNEGVSSVLLGASNAEQLMENIGAIQVLPKLSSSIVHEIDSILGNKP 325 (327)
T ss_dssp HHHHHHHHHHHHHTSCHHHHHHHHHHSSTTCCEEEECCSSHHHHHHHHGGGGGGGGCCHHHHHHHHHHHCCCC
T ss_pred HHHHHHHHHHHHhCcCHHHHHHHHHHhCCCCceEEeCCCCHHHHHHHHHHhccCCCCCHHHHHHHHHHhhccC
Confidence 67789999999999999999999999999999999999999999999999998 899999999999988654
No 9
>3lut_A Voltage-gated potassium channel subunit beta-2; voltage gating, potassium channel, KV1.2, gating charges, no analysis, ION transport; HET: NAP; 2.90A {Rattus norvegicus}
Probab=100.00 E-value=7.4e-47 Score=333.15 Aligned_cols=221 Identities=27% Similarity=0.421 Sum_probs=187.1
Q ss_pred CCCCHHHHHHHHHHHHhHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCcccEEeccCCcHHHHHHHhcc------C
Q 025789 9 VKGSPEYVRKCCEASLKRLDVDYIDLYYQHRVDTSVSIEDTMGELKKLVEEGKIKYIGLSEASADTIRRAHAV------H 82 (248)
Q Consensus 9 ~~~s~~~i~~~~e~SL~rL~~d~iDl~~lH~~~~~~~~~~~~~~l~~l~~~G~ir~iGvS~~~~~~l~~~~~~------~ 82 (248)
.+++++.|++++++||+||||||||+|+||||+...+.+++|++|++|+++||||+||||||++.++++++.. .
T Consensus 129 ~~~s~~~i~~~~e~SL~rLg~dyiDl~~lH~pd~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~ 208 (367)
T 3lut_A 129 RGLSRKHIIEGLKASLERLQLEYVDVVFANRPDPNTPMEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAYSVARQFNLI 208 (367)
T ss_dssp BSSCHHHHHHHHHHHHHHHTCSCEEEEEESSCCTTSCHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHHHHHTCC
T ss_pred CCCCHHHHHHHHHHHHHHhCCCccceEEecCCCCCCCHHHHHHHHHHHHHcCCeeEEEecCCCHHHHHHHHHHHHHcCCC
Confidence 4678999999999999999999999999999999999999999999999999999999999999999887653 6
Q ss_pred CcceeccccCCccccc-hhchHHHHHHcCCcEEeeccccccccccccccCCCCchhhhhcCCCC-------CchhhHHHH
Q 025789 83 PITAVQMEYSLWTREI-EDDIIPLCRELGIGIVAYSPLGRGFFAGKAVVESLPSESILAMHPRF-------SGENLEKNK 154 (248)
Q Consensus 83 ~~~~~q~~~~~~~~~~-~~~~~~~~~~~gi~v~~~~~l~~G~l~g~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~ 154 (248)
+++++|++||++++.. +.+++++|+++||++++|+||++|+|+|+..... +. +.+...+.+ ..+......
T Consensus 209 ~~~~~Q~~~~~~~~~~~e~~l~~~~~~~gi~v~a~spL~~G~Ltgk~~~~~-~~-~~r~~~~~~~~~~~~~~~~~~~~~~ 286 (367)
T 3lut_A 209 PPICEQAEYHMFQREKVEVQLPELFHKIGVGAMTWSPLACGIVSGKYDSGI-PP-YSRASLKGYQWLKDKILSEEGRRQQ 286 (367)
T ss_dssp CCCEEEEECBTTBCHHHHTHHHHHHHHHCCEEEEECTTGGGGGGTTTTTSC-CT-TSGGGSTTCHHHHHHHTSHHHHHHH
T ss_pred CceeeeccccceecchhHhHHHHHHHHcCCeEEEecccccccccCCcCCCC-CC-cccccccccccccccccchhhHHHH
Confidence 8899999999999875 4589999999999999999999999999854322 21 122211111 111223345
Q ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHhCCCCceeecCCCChHhHHHhhcccCC--CCCHHHHHHHHhhcCCCCCCCCCC
Q 025789 155 LLYTRLETLAAKYGCTTPQLALAWLLHQGDDIVPIPGTTKITNLDNNIGSLAL--KLKEEDLKEICKTIPVDEVGGHRD 231 (248)
Q Consensus 155 ~~~~~l~~ia~~~~~s~~q~al~~~l~~~~v~~~i~G~~~~~~l~enl~a~~~--~Lt~~~~~~l~~~~~~~~~~~~~~ 231 (248)
...+.+.++|+++|+|++|+||+|+++++.|+++|+|+++++||++|++++++ +||++++++|+++.+..+..+.+|
T Consensus 287 ~~~~~l~~iA~~~g~t~aqvaL~w~l~~~~v~~vI~g~~~~~~l~en~~a~~~~~~Ls~e~~~~i~~~~~~~~~~~~~~ 365 (367)
T 3lut_A 287 AKLKELQAIAERLGCTLPQLAIAWCLRNEGVSSVLLGASNAEQLMENIGAIQVLPKLSSSIVHEIDSILGNKPYSKKDY 365 (367)
T ss_dssp HHHHHHHHHHHHTTSCHHHHHHHHHHTSTTEEEEEECCSSHHHHHHHHTHHHHGGGCCHHHHHHHHHHHCCCCCC----
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHhCCCCcEEecCCCCHHHHHHHHHhhcccCCCCHHHHHHHHHHHhcCCCccccc
Confidence 67789999999999999999999999999999999999999999999999986 899999999999999887776665
No 10
>1gve_A Aflatoxin B1 aldehyde reductase member 3; oxidoreductase, aldo-keto reductase, succinic semialdehyde oxidoreductase, AKR7 family; HET: NAP CIT; 1.38A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 2clp_A* 2c91_A*
Probab=100.00 E-value=3.3e-46 Score=324.36 Aligned_cols=220 Identities=23% Similarity=0.308 Sum_probs=186.2
Q ss_pred CCCHHHHHHHHHHHHhHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCcccEEeccCCcHHHHHHHhcc------CC
Q 025789 10 KGSPEYVRKCCEASLKRLDVDYIDLYYQHRVDTSVSIEDTMGELKKLVEEGKIKYIGLSEASADTIRRAHAV------HP 83 (248)
Q Consensus 10 ~~s~~~i~~~~e~SL~rL~~d~iDl~~lH~~~~~~~~~~~~~~l~~l~~~G~ir~iGvS~~~~~~l~~~~~~------~~ 83 (248)
+++++.+++++++||+||||||||+|+||||+...+.+++|++|++|+++||||+||||||+..++++++.. .+
T Consensus 81 ~~~~~~i~~~~~~SL~rL~~dyiDl~~lH~p~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~g~~~ 160 (327)
T 1gve_A 81 TLKPADVRFQLETSLKRLQCPRVDLFYLHFPDHGTPIEETLQACHQLHQEGKFVELGLSNYVSWEVAEICTLCKKNGWIM 160 (327)
T ss_dssp CSSHHHHHHHHHHHHHHTTCSCEEEEEECSCCTTSCHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHHHHHTCCC
T ss_pred CCCHHHHHHHHHHHHHHHCCCeEeEEEecCCCCCCCHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHcCCCC
Confidence 679999999999999999999999999999999889999999999999999999999999999998887653 67
Q ss_pred cceeccccCCccccchhchHHHHHHcCCcEEeeccccccccccccccCCCCchhhhhcCCCCCch----------hhHHH
Q 025789 84 ITAVQMEYSLWTREIEDDIIPLCRELGIGIVAYSPLGRGFFAGKAVVESLPSESILAMHPRFSGE----------NLEKN 153 (248)
Q Consensus 84 ~~~~q~~~~~~~~~~~~~~~~~~~~~gi~v~~~~~l~~G~l~g~~~~~~~~~~~~~~~~~~~~~~----------~~~~~ 153 (248)
++++|++||++++..+.+++++|+++||++++|+||++|+|+|+......+. +...+.|... ..+..
T Consensus 161 ~~~~Q~~~~~~~~~~e~~l~~~~~~~gi~v~a~spL~~G~Ltg~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (327)
T 1gve_A 161 PTVYQGMYNAITRQVETELFPCLRHFGLRFYAFNPLAGGLLTGRYKYQDKDG---KNPESRFFGNPFSQLYMDRYWKEEH 237 (327)
T ss_dssp EEEEEEECBTTBCGGGTTHHHHHHHHTCEEEEECTTGGGGGGTCCCGGGGGS---CCCSSSSSSCTTHHHHHHHHCSHHH
T ss_pred eEEEeccCcceecccHHHHHHHHHHcCCeEEEecccccccccCcccCCCccc---cCCCccccccccchhhhhcccChHH
Confidence 8999999999999876789999999999999999999999998732111000 0000111110 01344
Q ss_pred HHHHHHHHHHHHH----hCCCHHHHHHHHHHhCCCC-----ceeecCCCChHhHHHhhcccCC-CCCHHHHHHHHhhcCC
Q 025789 154 KLLYTRLETLAAK----YGCTTPQLALAWLLHQGDD-----IVPIPGTTKITNLDNNIGSLAL-KLKEEDLKEICKTIPV 223 (248)
Q Consensus 154 ~~~~~~l~~ia~~----~~~s~~q~al~~~l~~~~v-----~~~i~G~~~~~~l~enl~a~~~-~Lt~~~~~~l~~~~~~ 223 (248)
....+.+.++|++ +|+|++|+||+|++++|.| +++|+|+++++||++|++++++ +||++++++|+++...
T Consensus 238 ~~~~~~l~~ia~~~~~~~g~s~aqvaL~w~l~~~~v~~~~g~~~I~g~~~~~~l~en~~a~~~~~L~~e~~~~l~~~~~~ 317 (327)
T 1gve_A 238 FNGIALVEKALKTTYGPTAPSMISAAVRWMYHHSQLKGTQGDAVILGMSSLEQLEQNLALVEEGPLEPAVVDAFDQAWNL 317 (327)
T ss_dssp HHHHHHHHHHHHHHHCTTCCCHHHHHHHHHHHTSSCCGGGTCEEEECCSSHHHHHHHHHHTTCCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhccccCCCHHHHHHHHHHhCCCccccCCCeEEECCCCHHHHHHHHHhcCCCCCCHHHHHHHHHHHHh
Confidence 5677899999999 9999999999999999988 7999999999999999999987 8999999999999876
Q ss_pred CCCCCCCCC
Q 025789 224 DEVGGHRDY 232 (248)
Q Consensus 224 ~~~~~~~~~ 232 (248)
.+...+.||
T Consensus 318 ~~~~~~~~~ 326 (327)
T 1gve_A 318 VAHECPNYF 326 (327)
T ss_dssp HGGGCCCSC
T ss_pred ccCCCcccc
Confidence 555555554
No 11
>2bp1_A Aflatoxin B1 aldehyde reductase member 2; oxidoreductase, aldo-keto reductase family 7, SSA reductase, barrel; HET: FLC NDP; 2.4A {Homo sapiens}
Probab=100.00 E-value=1.3e-45 Score=324.19 Aligned_cols=219 Identities=25% Similarity=0.336 Sum_probs=185.8
Q ss_pred CCCHHHHHHHHHHHHhHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCcccEEeccCCcHHHHHHHhcc------CC
Q 025789 10 KGSPEYVRKCCEASLKRLDVDYIDLYYQHRVDTSVSIEDTMGELKKLVEEGKIKYIGLSEASADTIRRAHAV------HP 83 (248)
Q Consensus 10 ~~s~~~i~~~~e~SL~rL~~d~iDl~~lH~~~~~~~~~~~~~~l~~l~~~G~ir~iGvS~~~~~~l~~~~~~------~~ 83 (248)
+++++.+++++++||+||||||||+|+||||+...+.+++|++|++|+++||||+||||||+..++++++.. .+
T Consensus 114 ~~~~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~~~~~e~~~aL~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~g~~~ 193 (360)
T 2bp1_A 114 SLKPDSVRSQLETSLKRLQCPQVDLFYLHAPDHGTPVEETLHACQRLHQEGKFVELGLSNYASWEVAEICTLCKSNGWIL 193 (360)
T ss_dssp CSSHHHHHHHHHHHHHHHTCSCEEEEEECSCCTTSCHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHHHHHTCCC
T ss_pred CCCHHHHHHHHHHHHHHhCCCeEeEEEecCCCCCCCHHHHHHHHHHHHHCCCccEEEEeCCCHHHHHHHHHHHHHcCCCC
Confidence 689999999999999999999999999999999889999999999999999999999999999998887653 57
Q ss_pred cceeccccCCccccchhchHHHHHHcCCcEEeeccccccccccccccC-CCCchhhhhcCCCCCch----------hhHH
Q 025789 84 ITAVQMEYSLWTREIEDDIIPLCRELGIGIVAYSPLGRGFFAGKAVVE-SLPSESILAMHPRFSGE----------NLEK 152 (248)
Q Consensus 84 ~~~~q~~~~~~~~~~~~~~~~~~~~~gi~v~~~~~l~~G~l~g~~~~~-~~~~~~~~~~~~~~~~~----------~~~~ 152 (248)
++++|++||++++..+.+++++|+++||++++|+||++|+|+|+.... .++ +...+.|... ..+.
T Consensus 194 ~~~~Q~~yn~~~~~~e~~l~~~~~~~gi~v~a~spL~~G~Ltg~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 269 (360)
T 2bp1_A 194 PTVYQGMYNATTRQVETELFPCLRHFGLRFYAYNPLAGGLLTGKYKYEDKDG----KQPVGRFFGNSWAETYRNRFWKEH 269 (360)
T ss_dssp EEEEEEECBTTBCGGGTTHHHHHHHHTCEEEEECTTGGGGGGTCCCGGGGTT----TCCSBTTBSSTTHHHHHHHHCCHH
T ss_pred ceEEeeccchhhccchhhHHHHHHHcCCeEEEecccccCcccCCccCcCccc----ccccccccccccchhhhhcccchh
Confidence 899999999999987678999999999999999999999999874321 111 0000112110 0134
Q ss_pred HHHHHHHHHHHHHH----hCCCHHHHHHHHHHhCCCC-----ceeecCCCChHhHHHhhcccCC-CCCHHHHHHHHhhcC
Q 025789 153 NKLLYTRLETLAAK----YGCTTPQLALAWLLHQGDD-----IVPIPGTTKITNLDNNIGSLAL-KLKEEDLKEICKTIP 222 (248)
Q Consensus 153 ~~~~~~~l~~ia~~----~~~s~~q~al~~~l~~~~v-----~~~i~G~~~~~~l~enl~a~~~-~Lt~~~~~~l~~~~~ 222 (248)
.....+.+.++|++ +|+|++|+||+|++++|.| .++|+|+++++||++|++++++ +||++++++|+++..
T Consensus 270 ~~~~~~~l~~ia~~~~~~~g~s~aqvaL~w~l~~~~v~~~~g~~vI~G~~~~~~l~enl~a~~~~~L~~e~~~~l~~~~~ 349 (360)
T 2bp1_A 270 HFEAIALVEKALQAAYGASAPSVTSAALRWMYHHSQLQGAHGDAVILGMSSLEQLEQNLAATEEGPLEPAVVDAFNQAWH 349 (360)
T ss_dssp HHHHHHHHHHHHHHHHGGGCCCHHHHHHHHHHHHSSCCGGGTCEEEECCSSHHHHHHHHHHHTSCCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHhCCcccccCCCeEEECCCCHHHHHHHHHhcCCCCCCHHHHHHHHHHHH
Confidence 45677899999999 9999999999999999988 7999999999999999999997 899999999999987
Q ss_pred CCCCCCCCCC
Q 025789 223 VDEVGGHRDY 232 (248)
Q Consensus 223 ~~~~~~~~~~ 232 (248)
..+...+.||
T Consensus 350 ~~~~~~~~~~ 359 (360)
T 2bp1_A 350 LVAHECPNYF 359 (360)
T ss_dssp HHGGGCCCSC
T ss_pred hccCCccccc
Confidence 6554444554
No 12
>1ynp_A Oxidoreductase, AKR11C1; aldo-keto reductase, NADPH; HET: SUC; 1.25A {Bacillus halodurans} PDB: 1ynq_A*
Probab=100.00 E-value=4.6e-45 Score=315.63 Aligned_cols=203 Identities=25% Similarity=0.388 Sum_probs=175.3
Q ss_pred CCCCCCHHHHHHHHHHHHhHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCcccEEeccCCcHHHHHHHhccCCcce
Q 025789 7 IGVKGSPEYVRKCCEASLKRLDVDYIDLYYQHRVDTSVSIEDTMGELKKLVEEGKIKYIGLSEASADTIRRAHAVHPITA 86 (248)
Q Consensus 7 ~~~~~s~~~i~~~~e~SL~rL~~d~iDl~~lH~~~~~~~~~~~~~~l~~l~~~G~ir~iGvS~~~~~~l~~~~~~~~~~~ 86 (248)
+..+++++.+++++++||+||||||||+|+||||+...+.+++|++|++|+++||||+||||||++++++++++..++++
T Consensus 108 ~~~~~~~~~v~~~~e~SL~rL~~dyiDl~llH~p~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~ 187 (317)
T 1ynp_A 108 WWWDPSKAYIKEAVKDSLRRLQTDYIDLYQLHGGTIDDPIDETIEAFEELKQEGVIRYYGISSIRPNVIKEYLKRSNIVS 187 (317)
T ss_dssp -----CHHHHHHHHHHHHHHHTCSCEEEEEECSCCTTSCHHHHHHHHHHHHHHTSEEEEEEECCCHHHHHHHHHHSCCCE
T ss_pred ccCCCCHHHHHHHHHHHHHHHCCCcEeEEEecCCCCCCChHHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHhcCCCEE
Confidence 34578999999999999999999999999999999888899999999999999999999999999999999999888999
Q ss_pred eccccCCccccchhchHHHHHHcCCcEEeeccccccccccccccCCCCchhhhhcCCCCCchhhHHHHHHHHHHHHHHHH
Q 025789 87 VQMEYSLWTREIEDDIIPLCRELGIGIVAYSPLGRGFFAGKAVVESLPSESILAMHPRFSGENLEKNKLLYTRLETLAAK 166 (248)
Q Consensus 87 ~q~~~~~~~~~~~~~~~~~~~~~gi~v~~~~~l~~G~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ia~~ 166 (248)
+|++||++++..+. ++++|+++||++++|+||++|+|+++ .+. . + +.|.... .....+.+.++|+
T Consensus 188 ~Q~~~nl~~~~~e~-l~~~~~~~gI~v~a~spL~~G~L~~~-~~~-~-----~---~~~~~~~---~~~~~~~l~~ia~- 252 (317)
T 1ynp_A 188 IMMQYSILDRRPEE-WFPLIQEHGVSVVVRGPVARGLLSRR-PLP-E-----G---EGYLNYR---YDELKLLRESLPT- 252 (317)
T ss_dssp EEEECBTTBCGGGG-GHHHHHHTTCEEEEECTTGGGTTSSS-CCC-T-----T---CCBTTBC---HHHHHHHHHHSCS-
T ss_pred EeccCCchhCCHHH-HHHHHHHcCCeEEEecCccCcccCCC-CCc-c-----c---ccccccc---HHHHHHHHHHHHc-
Confidence 99999999997644 99999999999999999999999876 111 0 0 1111111 1234467888887
Q ss_pred hCCCHHHHHHHHHHhCCCCceeecCCCChHhHHHhhcccC-CCCCHHHHHHHHhhcCCCC
Q 025789 167 YGCTTPQLALAWLLHQGDDIVPIPGTTKITNLDNNIGSLA-LKLKEEDLKEICKTIPVDE 225 (248)
Q Consensus 167 ~~~s~~q~al~~~l~~~~v~~~i~G~~~~~~l~enl~a~~-~~Lt~~~~~~l~~~~~~~~ 225 (248)
|+|++|+||+|++++|.|+++|+|+++++||++|+++++ ++||++++++|+++....+
T Consensus 253 -g~s~aqvaL~w~l~~~~v~~vI~g~~~~~~l~en~~a~~~~~Ls~ee~~~l~~~~~~~~ 311 (317)
T 1ynp_A 253 -DRPLHELALQYCLAHDVVATVAAGASSIDQVKANVQAVEATPLTAEERQHIQKLAKAAV 311 (317)
T ss_dssp -SSCHHHHHHHHHHTSTTEEEEECCCSSHHHHHHHHHHHTSCCCCHHHHHHHHHHSCCCC
T ss_pred -CCCHHHHHHHHHHhCCCCeEEEeCCCCHHHHHHHHHhccCCCCCHHHHHHHHHHHhhhc
Confidence 999999999999999999999999999999999999999 8999999999999987544
No 13
>3up8_A Putative 2,5-diketo-D-gluconic acid reductase B; nysgrc, PSI-biology, structural genomics; 1.96A {Sinorhizobium meliloti}
Probab=100.00 E-value=5.6e-45 Score=312.04 Aligned_cols=194 Identities=22% Similarity=0.394 Sum_probs=173.8
Q ss_pred CCCCCHHHHHHHHHHHHhHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCcccEEeccCCcHHHHHHHhcc--CCcc
Q 025789 8 GVKGSPEYVRKCCEASLKRLDVDYIDLYYQHRVDTSVSIEDTMGELKKLVEEGKIKYIGLSEASADTIRRAHAV--HPIT 85 (248)
Q Consensus 8 ~~~~s~~~i~~~~e~SL~rL~~d~iDl~~lH~~~~~~~~~~~~~~l~~l~~~G~ir~iGvS~~~~~~l~~~~~~--~~~~ 85 (248)
..+++++.+++++++||+||||||||+|+||||+...+.+++|++|++++++||||+||||||++++++++++. .+++
T Consensus 98 ~~~~~~~~i~~~~e~SL~rLg~dyiDl~llH~p~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~ 177 (298)
T 3up8_A 98 VDNYRHDAFIASVDESLRKLRTDHVDLLLLHWPGSDVPMAERIGALNEVRNAGKVRHIGISNFNTTQMEEAARLSDAPIA 177 (298)
T ss_dssp GGGCSHHHHHHHHHHHHHHHTSSCEEEEEESCSCCSSCHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHCSSCEE
T ss_pred CCCCCHHHHHHHHHHHHHHhCCCcEEEEEEccCCCCCCHHHHHHHHHHHHHcCCccEEEEcCCCHHHHHHHHHhCCCCce
Confidence 35789999999999999999999999999999999889999999999999999999999999999999998776 3789
Q ss_pred eeccccCCccccchhchHHHHHHcCCcEEeeccccccccccccccCCCCchhhhhcCCCCCchhhHHHHHHHHHHHHHHH
Q 025789 86 AVQMEYSLWTREIEDDIIPLCRELGIGIVAYSPLGRGFFAGKAVVESLPSESILAMHPRFSGENLEKNKLLYTRLETLAA 165 (248)
Q Consensus 86 ~~q~~~~~~~~~~~~~~~~~~~~~gi~v~~~~~l~~G~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ia~ 165 (248)
++|++||++.+ +.+++++|+++||++++|+||++|.+.+. +.+.++|+
T Consensus 178 ~~Q~~~~~~~~--~~~l~~~~~~~gi~v~a~spL~~G~l~~~------------------------------~~l~~ia~ 225 (298)
T 3up8_A 178 TNQVEYHPYLD--QTKVLQTARRLGMSLTSYYAMANGKVPAD------------------------------PLLTEIGG 225 (298)
T ss_dssp EEEEECBTTBC--CHHHHHHHHHHTCEEEEECTTGGGHHHHC------------------------------HHHHHHHH
T ss_pred EEEEecccccc--cHHHHHHHHHCCCEEEEECCCcCCccccc------------------------------chHHHHHH
Confidence 99999999987 46899999999999999999999865321 37899999
Q ss_pred HhCCCHHHHHHHHHHhCCCCceeecCCCChHhHHHhhcccCCCCCHHHHHHHHhh-cCCCCCCCC-CCCcc
Q 025789 166 KYGCTTPQLALAWLLHQGDDIVPIPGTTKITNLDNNIGSLALKLKEEDLKEICKT-IPVDEVGGH-RDYSN 234 (248)
Q Consensus 166 ~~~~s~~q~al~~~l~~~~v~~~i~G~~~~~~l~enl~a~~~~Lt~~~~~~l~~~-~~~~~~~~~-~~~~~ 234 (248)
++|+|++|+||+|++++|.|+ +|+|+++++|+++|+++++++||++|++.|+++ .+..+..++ .|..+
T Consensus 226 ~~g~s~aqvaL~w~l~~p~v~-~I~g~~~~~~l~en~~a~~~~L~~ee~~~l~~l~~~~~r~~~p~~~~~~ 295 (298)
T 3up8_A 226 RHGKTAAQVALRWLVQQQDVI-VLSKTATEARLKENFAIFDFALTREEMAAVRELARPNGRIVNPQGLAPE 295 (298)
T ss_dssp HHTCCHHHHHHHHHHTSTTEE-EEECCCSHHHHHHHHCCSSCCCCHHHHHHHHTTCCTTCCCCCBTTTSCC
T ss_pred HcCCCHHHHHHHHHHHCCCcE-EEECCCCHHHHHHHHHhCCCCCCHHHHHHHHHHhccCCcccCCCCCCCC
Confidence 999999999999999998775 899999999999999999999999999999999 554444444 34443
No 14
>1ur3_M Hypothetical oxidoreductase YDHF; NADP binding, aldo-keto reductase; 2.57A {Escherichia coli} SCOP: c.1.7.1 PDB: 1og6_A*
Probab=100.00 E-value=9.1e-45 Score=313.95 Aligned_cols=193 Identities=22% Similarity=0.298 Sum_probs=176.0
Q ss_pred CCCCHHHHHHHHHHHHhHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCcccEEeccCCcHHHHHHHhccC--Ccce
Q 025789 9 VKGSPEYVRKCCEASLKRLDVDYIDLYYQHRVDTSVSIEDTMGELKKLVEEGKIKYIGLSEASADTIRRAHAVH--PITA 86 (248)
Q Consensus 9 ~~~s~~~i~~~~e~SL~rL~~d~iDl~~lH~~~~~~~~~~~~~~l~~l~~~G~ir~iGvS~~~~~~l~~~~~~~--~~~~ 86 (248)
.+++++.+++++++||+||||||||+|+||||+...+.+++|++|++++++||||+||||||++++++++.+.. ++++
T Consensus 120 ~~~~~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~ 199 (319)
T 1ur3_M 120 YITDRDHIIKSAEQSLINLATDHLDLLLIHRPDPLMDADEVADAFKHLHQSGKVRHFGVSNFTPAQFALLQSRLPFTLAT 199 (319)
T ss_dssp ECCCHHHHHHHHHHHHHHHTCSCBSEEEECSCCTTCCHHHHHHHHHHHHHTTSBCCEEEESCCHHHHHHHHTTCSSCCCC
T ss_pred CCCCHHHHHHHHHHHHHHhCCCCeeEEEecCCCCCCCHHHHHHHHHHHHHCCCccEEEecCCCHHHHHHHHHhcCCCcEE
Confidence 47899999999999999999999999999999988889999999999999999999999999999999988763 7899
Q ss_pred eccccCCccccc-hhchHHHHHHcCCcEEeeccccccccccccccCCCCchhhhhcCCCCCchhhHHHHHHHHHHHHHHH
Q 025789 87 VQMEYSLWTREI-EDDIIPLCRELGIGIVAYSPLGRGFFAGKAVVESLPSESILAMHPRFSGENLEKNKLLYTRLETLAA 165 (248)
Q Consensus 87 ~q~~~~~~~~~~-~~~~~~~~~~~gi~v~~~~~l~~G~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ia~ 165 (248)
+|++||++++.. +.+++++|+++||++++|+||++|+|.+. +......+.+.++|+
T Consensus 200 ~Q~~~~~~~~~~~~~~ll~~~~~~gi~v~a~spL~~G~L~~~-----------------------~~~~~~~~~l~~ia~ 256 (319)
T 1ur3_M 200 NQVEISPVHQPLLLDGTLDQLQQLRVRPMAWSCLGGGRLFND-----------------------DYFQPLRDELAVVAE 256 (319)
T ss_dssp EEEECBTTBCGGGTSSHHHHHHHHTCCCEEECCCTTTCSSSC-----------------------GGGHHHHHHHHHHHH
T ss_pred EEccCchhhCchhhHHHHHHHHHcCCeEEEeccccCccccCC-----------------------chhHHHHHHHHHHHH
Confidence 999999999875 46799999999999999999999987421 012345678999999
Q ss_pred HhCCCH-HHHHHHHHHhCCCCceeecCCCChHhHHHhhcccCCCCCHHHHHHHHhhcCCC
Q 025789 166 KYGCTT-PQLALAWLLHQGDDIVPIPGTTKITNLDNNIGSLALKLKEEDLKEICKTIPVD 224 (248)
Q Consensus 166 ~~~~s~-~q~al~~~l~~~~v~~~i~G~~~~~~l~enl~a~~~~Lt~~~~~~l~~~~~~~ 224 (248)
++|+|+ +|+||+|++++|.++++|+|+++++||++|+++++++||++++++|+++.+..
T Consensus 257 ~~g~t~~aqvaL~w~l~~~~~~~~I~G~~~~~~l~en~~a~~~~Ls~ee~~~l~~~~~~~ 316 (319)
T 1ur3_M 257 ELNAGSIEQVVNAWVLRLPSQPLPIIGSGKIERVRAAVEAETLKMTRQQWFRIRKAALGY 316 (319)
T ss_dssp HTTCSCHHHHHHHHHHTSTTCCEEEECCSCHHHHHHHHGGGGCCCCHHHHHHHHHHHHSS
T ss_pred HcCCChHHHHHHHHHHhCCCCeEEEeCCCCHHHHHHHHHhccCCCCHHHHHHHHHHhcCC
Confidence 999999 99999999999999999999999999999999999999999999999987643
No 15
>1qwk_A Aldose reductase, aldo-keto reductase family 1 member C1, XH961; structural genomics, PSI, protein structure initiative; 1.60A {Caenorhabditis elegans} SCOP: c.1.7.1
Probab=100.00 E-value=3.5e-44 Score=310.25 Aligned_cols=220 Identities=22% Similarity=0.318 Sum_probs=178.7
Q ss_pred CCCCCHHHHHHHHHHHHhHcCCCcccEEEeccCCC---------CCCHHHHHHHHHHHHHcCcccEEeccCCcHHHHHHH
Q 025789 8 GVKGSPEYVRKCCEASLKRLDVDYIDLYYQHRVDT---------SVSIEDTMGELKKLVEEGKIKYIGLSEASADTIRRA 78 (248)
Q Consensus 8 ~~~~s~~~i~~~~e~SL~rL~~d~iDl~~lH~~~~---------~~~~~~~~~~l~~l~~~G~ir~iGvS~~~~~~l~~~ 78 (248)
..+++++.+++++++||+||||||||+|+||||+. ..+.+++|++|++|+++||||+||||||++++++++
T Consensus 84 ~~~~~~~~i~~~~~~SL~rL~~dyiDl~~lH~p~~~~~~~~~~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~ 163 (317)
T 1qwk_A 84 THELAPGKLEGGLRESLKKLQLEYVDLYLAHMPAAFNDDMSEHIASPVEDVWRQFDAVYKAGLAKAVGVSNWNNDQISRA 163 (317)
T ss_dssp TTTSSTTTHHHHHHHHHHHHTCSCBSEEEESCSCEECTTSCSEECCCHHHHHHHHHHHHHTTSBSSEEEESCCHHHHHHH
T ss_pred CCcCCHHHHHHHHHHHHHHhCCCceeEEEEeccCccccccccccCCCHHHHHHHHHHHHHcCCeeEEEecCCCHHHHHHH
Confidence 34678999999999999999999999999999974 347899999999999999999999999999999999
Q ss_pred hcc--CCcceeccccCCccccchhchHHHHHHcCCcEEeeccccccccccccccCCCCchhhhhcCCCCCchhhHHHHHH
Q 025789 79 HAV--HPITAVQMEYSLWTREIEDDIIPLCRELGIGIVAYSPLGRGFFAGKAVVESLPSESILAMHPRFSGENLEKNKLL 156 (248)
Q Consensus 79 ~~~--~~~~~~q~~~~~~~~~~~~~~~~~~~~~gi~v~~~~~l~~G~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (248)
++. .+++++|++||++++. .+++++|+++||++++|+||++|.++ +.........+.+. .|.+ . .
T Consensus 164 ~~~~~~~~~~~Q~~~~~~~~~--~~l~~~~~~~gI~v~a~spL~~G~l~-~~~~~~~~~~~~~~-~~~~----~-----~ 230 (317)
T 1qwk_A 164 LALGLTPVHNSQVELHLYFPQ--HDHVDFCKKHNISVTSYATLGSPGRV-NFTLPTGQKLDWAP-APSD----L-----Q 230 (317)
T ss_dssp HTTCSSCCCEEEEECBTTBCC--HHHHHHHHHTTCEEEEESTTCSCCEE-CCBCTTCCBCCCEE-CSSG----G-----G
T ss_pred HHhcCCccceecceeccccCc--HHHHHHHHHcCCEEEEecCccCCCcc-cccccccccccccc-cchh----h-----c
Confidence 876 4579999999999874 67999999999999999999999775 31111000011110 0100 0 1
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHHhCCCCceeecCCCChHhHHHhhcccCCCCCHHHHHHHHhhcCCCCCCCCCCCcccc
Q 025789 157 YTRLETLAAKYGCTTPQLALAWLLHQGDDIVPIPGTTKITNLDNNIGSLALKLKEEDLKEICKTIPVDEVGGHRDYSNLS 236 (248)
Q Consensus 157 ~~~l~~ia~~~~~s~~q~al~~~l~~~~v~~~i~G~~~~~~l~enl~a~~~~Lt~~~~~~l~~~~~~~~~~~~~~~~~~~ 236 (248)
.+.+.++|+++|+|++|+||+|+++++. ++|+|+++++||++|+++++++||++++++|+++.+..+.....+...
T Consensus 231 ~~~l~~ia~~~g~s~aqvaL~w~l~~~~--~vI~g~~~~~~l~en~~a~~~~L~~e~~~~l~~~~~~~~~~~~~~~~~-- 306 (317)
T 1qwk_A 231 DQNVLALAEKTHKTPAQVLLRYALDRGC--AILPKSIQENRIKENFEVFDFSLTEEDIAKLEESKNSQRLFLQDFMTG-- 306 (317)
T ss_dssp CHHHHHHHHHHTCCHHHHHHHHHHHTTC--EEECCCCSHHHHHHHHCCSSCCCCHHHHHHHTTTCCCCCSCCCGGGTT--
T ss_pred cHHHHHHHHHHCcCHHHHHHHHHHhCCC--eEEeCCCCHHHHHHHHhhcCCCCCHHHHHHHHHHhhcCccccchhccC--
Confidence 2588999999999999999999999984 899999999999999999999999999999999988765544333322
Q ss_pred cccccccC
Q 025789 237 GYGYKFAN 244 (248)
Q Consensus 237 ~~~~~~~~ 244 (248)
+..|.|++
T Consensus 307 ~~~~~~~~ 314 (317)
T 1qwk_A 307 HPEDAFAA 314 (317)
T ss_dssp CTTCTTGG
T ss_pred CCCCCCCc
Confidence 34555543
No 16
>4gac_A Alcohol dehydrogenase [NADP(+)]; TIM barrel, aldheyde reductase AKR1A4, SMAR1, oxidoreductase; HET: FLC; 1.64A {Mus musculus} PDB: 2alr_A 3h4g_A* 3cv7_A* 3fx4_A* 1ae4_A* 1cwn_A* 1hqt_A*
Probab=100.00 E-value=2.7e-44 Score=311.95 Aligned_cols=214 Identities=25% Similarity=0.355 Sum_probs=182.1
Q ss_pred CCCCCCHHHHHHHHHHHHhHcCCCcccEEEeccCCC-------------------CCCHHHHHHHHHHHHHcCcccEEec
Q 025789 7 IGVKGSPEYVRKCCEASLKRLDVDYIDLYYQHRVDT-------------------SVSIEDTMGELKKLVEEGKIKYIGL 67 (248)
Q Consensus 7 ~~~~~s~~~i~~~~e~SL~rL~~d~iDl~~lH~~~~-------------------~~~~~~~~~~l~~l~~~G~ir~iGv 67 (248)
+..+.+++.+++++++||+||||||||+|++|||+. ..+++|+|++|++|+++||||+||+
T Consensus 81 ~~~~~~~~~i~~~~~~SL~rL~~dyiDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~al~~l~~~Gkir~iGv 160 (324)
T 4gac_A 81 WNTKHHPEDVEPALRKTLADLQLEYLDLYLMHWPYAFERGDNPFPKNADGTVRYDSTHYKETWKALEVLVAKGLVKALGL 160 (324)
T ss_dssp CGGGCSHHHHHHHHHHHHHHHTCSCBSEEEESCSSEECSSSCSSCBCTTSCBCEECCCHHHHHHHHHHHHHTTSBSCEEE
T ss_pred CCCCCCHHHHHHHHHHHHHHhCCCccceeeeccCcccccccccccccccCccccCCCCHHHHHHHHHHHHHCCCeeEecC
Confidence 456789999999999999999999999999999863 3568999999999999999999999
Q ss_pred cCCcHHHHHHHhcc--CCcceeccccCCccccchhchHHHHHHcCCcEEeeccccccccccccccCCCCchhhhhcCCCC
Q 025789 68 SEASADTIRRAHAV--HPITAVQMEYSLWTREIEDDIIPLCRELGIGIVAYSPLGRGFFAGKAVVESLPSESILAMHPRF 145 (248)
Q Consensus 68 S~~~~~~l~~~~~~--~~~~~~q~~~~~~~~~~~~~~~~~~~~~gi~v~~~~~l~~G~l~g~~~~~~~~~~~~~~~~~~~ 145 (248)
|||++++++++... ..+.++|++||+... +.+++++|+++||++++|+||++|.++++...... +
T Consensus 161 Sn~~~~~l~~~~~~~~~~~~~~q~~~~~~~~--~~~l~~~~~~~gi~~~a~spL~~g~~~~~~~~~~~-----------~ 227 (324)
T 4gac_A 161 SNFNSRQIDDVLSVASVRPAVLQVECHPYLA--QNELIAHCHARGLEVTAYSPLGSSDRAWRHPDEPV-----------L 227 (324)
T ss_dssp ESCCHHHHHHHHHHCSSCCCEEEEECBTTBC--CHHHHHHHHHHTCEEEEESTTCCGGGGGGSTTSCC-----------G
T ss_pred CCCCHHHHHHHHHhCCCCcceeeeccCchhh--HHHHHHHHHHhceeeeecCCcccCccccCCCCCcc-----------h
Confidence 99999999988765 456889999998776 46899999999999999999999998877432110 0
Q ss_pred CchhhHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHhCCCCceeecCCCChHhHHHhhcccCCCCCHHHHHHHHhhcCCCC
Q 025789 146 SGENLEKNKLLYTRLETLAAKYGCTTPQLALAWLLHQGDDIVPIPGTTKITNLDNNIGSLALKLKEEDLKEICKTIPVDE 225 (248)
Q Consensus 146 ~~~~~~~~~~~~~~l~~ia~~~~~s~~q~al~~~l~~~~v~~~i~G~~~~~~l~enl~a~~~~Lt~~~~~~l~~~~~~~~ 225 (248)
...+.+.++|+++|+|++|+||+|+++++. ++|+|+++++||++|++++++.||++|+++|+++.+..+
T Consensus 228 ---------~~~~~l~~iA~~~g~t~aqvaL~w~l~~~~--v~I~G~~~~~~l~eN~~a~~~~Ls~ee~~~id~l~~~~R 296 (324)
T 4gac_A 228 ---------LEEPVVLALAEKHGRSPAQILLRWQVQRKV--ICIPKSINPSRILQNIQVFDFTFSPEEMKQLDALNKNWR 296 (324)
T ss_dssp ---------GGCHHHHHHHHHHTCCHHHHHHHHHHHTTC--EECCBCCCHHHHHHHTCCSSCCCCHHHHHHHHTTCCCCC
T ss_pred ---------hhHHHHHHHHHHhCCCHHHHHHHHHHHCCC--EEEECCCCHHHHHHHHhhCCCCCCHHHHHHHhccCcCCC
Confidence 011378899999999999999999999996 689999999999999999999999999999999987665
Q ss_pred CC-------CCCCCcccccccccccC
Q 025789 226 VG-------GHRDYSNLSGYGYKFAN 244 (248)
Q Consensus 226 ~~-------~~~~~~~~~~~~~~~~~ 244 (248)
.. +.+|.....+..|+|.+
T Consensus 297 ~~~p~~~~~g~~~p~~~~hp~ypf~~ 322 (324)
T 4gac_A 297 YIVPMITVDGKRVPRDAGHPLYPFND 322 (324)
T ss_dssp CCCCEEEETTEEEESSTTSTTCSTTS
T ss_pred ccCCccccccccCccccCCCCCCCCC
Confidence 43 44465555566676654
No 17
>3ln3_A Dihydrodiol dehydrogenase; putative reductase, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: MLY MSE NAD; 1.18A {Mus musculus} SCOP: c.1.7.1
Probab=100.00 E-value=6.9e-44 Score=309.35 Aligned_cols=211 Identities=23% Similarity=0.305 Sum_probs=179.9
Q ss_pred CCCCCHHHHHHHHHHHHhHcCCCcccEEEeccCCC-------------------CCCHHHHHHHHHHHHHcCcccEEecc
Q 025789 8 GVKGSPEYVRKCCEASLKRLDVDYIDLYYQHRVDT-------------------SVSIEDTMGELKKLVEEGKIKYIGLS 68 (248)
Q Consensus 8 ~~~~s~~~i~~~~e~SL~rL~~d~iDl~~lH~~~~-------------------~~~~~~~~~~l~~l~~~G~ir~iGvS 68 (248)
..+++++.+++++++||+||||||||+|+||||+. ..+.+++|++|++|+++||||+||||
T Consensus 88 ~~~~~~~~v~~~~~~SL~rL~~dyiDl~llH~p~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~al~~l~~~Gkir~iGvS 167 (324)
T 3ln3_A 88 CTCFRPELVXPALEXSLXXLQLDYVDLYIMHYPVPMXSGDNDFPVNEQGXSLLDTVDFCDTWERLEECXDAGLVXSIGVS 167 (324)
T ss_dssp GGGCSHHHHHHHHHHHHHHHTCSCEEEEEESCSCCBCCSSCSSCBCTTCCBCBCCCCHHHHHHHHHHHHHTTSEEEEEEE
T ss_pred CccCCHHHHHHHHHHHHHHhCCCcceEEEEecCccccccccccccccccccccccCCHHHHHHHHHHHHhcCCeeEEEec
Confidence 34678999999999999999999999999999975 34689999999999999999999999
Q ss_pred CCcHHHHHHHhccC----CcceeccccCCccccchhchHHHHHHcCCcEEeeccccccccccccccCCCCchhhhhcCCC
Q 025789 69 EASADTIRRAHAVH----PITAVQMEYSLWTREIEDDIIPLCRELGIGIVAYSPLGRGFFAGKAVVESLPSESILAMHPR 144 (248)
Q Consensus 69 ~~~~~~l~~~~~~~----~~~~~q~~~~~~~~~~~~~~~~~~~~~gi~v~~~~~l~~G~l~g~~~~~~~~~~~~~~~~~~ 144 (248)
||++++++++++.. ++.++|++||++.+ +.+++++|+++||++++|+||++|.+..... ... |.
T Consensus 168 n~~~~~l~~~~~~~~~~~~p~~~Q~~~~~~~~--~~~l~~~~~~~gi~v~a~spL~~g~~~~~~~-~~~---------~~ 235 (324)
T 3ln3_A 168 NFNHRQLERILNXPGLXYXPVCNQVECHLYLN--QRXLLDYCESXDIVLVAYGALGTQRYXEWVD-QNS---------PV 235 (324)
T ss_dssp SCCHHHHHHHHTCTTCCCCCSEEEEECBTTBC--CHHHHHHHHHTTCEEEEESTTSCCCCTTTSC-TTS---------CC
T ss_pred CCcHHHHHHHHHhcCccCCceeeEeeeCcccc--hHHHHHHHHHcCCEEEEecCCCCCCcccccc-cCC---------cc
Confidence 99999999998763 27799999999887 4789999999999999999999987532110 000 00
Q ss_pred CCchhhHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHhCCCCceeecCCCChHhHHHhhcccCCCCCHHHHHHHHhhcCCC
Q 025789 145 FSGENLEKNKLLYTRLETLAAKYGCTTPQLALAWLLHQGDDIVPIPGTTKITNLDNNIGSLALKLKEEDLKEICKTIPVD 224 (248)
Q Consensus 145 ~~~~~~~~~~~~~~~l~~ia~~~~~s~~q~al~~~l~~~~v~~~i~G~~~~~~l~enl~a~~~~Lt~~~~~~l~~~~~~~ 224 (248)
+ ...+.+.++|+++|+|++|+||+|+++++. ++|+|+++++||++|+++++++||++++++|+++....
T Consensus 236 ~---------~~~~~l~~ia~~~g~t~aqvaL~w~l~~~~--~~I~g~~~~~~l~en~~~~~~~L~~e~~~~l~~l~~~~ 304 (324)
T 3ln3_A 236 L---------LNDPVLCDVAXXNXRSPALIALRYLIQRGI--VPLAQSFXENEMRENLQVFGFQLSPEDMXTLDGLNXNF 304 (324)
T ss_dssp G---------GGCHHHHHHHHHHTSCHHHHHHHHHHHTTC--EEEECCSSHHHHHHHGGGGGCCCCHHHHHHHHTTCCCC
T ss_pred h---------hcCHHHHHHHHhhCCCHHHHHHHHHHhCCC--EEEeCCCCHHHHHHHHhhCCCCcCHHHHHHHHhcccCC
Confidence 0 011489999999999999999999999996 79999999999999999999999999999999999988
Q ss_pred CCCCCCCCccccccccccc
Q 025789 225 EVGGHRDYSNLSGYGYKFA 243 (248)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~ 243 (248)
+.....++.. +..+.|.
T Consensus 305 r~~~~~~~~~--~~~~p~~ 321 (324)
T 3ln3_A 305 RYLPAEFLVD--HPEYPFV 321 (324)
T ss_dssp CSCCCGGGCS--STTCTTS
T ss_pred cccCchhhhc--CCCCCCC
Confidence 8877777665 4555554
No 18
>3b3d_A YTBE protein, putative morphine dehydrogenase; aldo-keto reductase, oxidoreductase; 2.30A {Bacillus subtilis}
Probab=100.00 E-value=5.1e-44 Score=308.65 Aligned_cols=188 Identities=26% Similarity=0.399 Sum_probs=170.1
Q ss_pred CCCCCCCHHHHHHHHHHHHhHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCcccEEeccCCcHHHHHHHhccCCcc
Q 025789 6 SIGVKGSPEYVRKCCEASLKRLDVDYIDLYYQHRVDTSVSIEDTMGELKKLVEEGKIKYIGLSEASADTIRRAHAVHPIT 85 (248)
Q Consensus 6 ~~~~~~s~~~i~~~~e~SL~rL~~d~iDl~~lH~~~~~~~~~~~~~~l~~l~~~G~ir~iGvS~~~~~~l~~~~~~~~~~ 85 (248)
.+..+++++.+++++++||+||||||||+|++|||+.. ...++|++|++|+++||||+||||||++++++++.....+.
T Consensus 118 ~~~~~~~~~~~~~~~e~SL~rL~~dyiDL~~~H~~~~~-~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~i~ 196 (314)
T 3b3d_A 118 VWNADLGYEETLAAFETSLSKLGLDYLDLYLIHWPVEG-KYKEAWRALETLYKEGRIKAIGVSNFQIHHLEDLMTAAEIK 196 (314)
T ss_dssp ECGGGCSHHHHHHHHHHHHHHHTCSCEEEEEESSCCTT-THHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHTTTCSSC
T ss_pred CcCCCCCHHHHHHHHHHHHHHhCCCccccccccccccc-chhHHHHHHHHHHHCCCEeEEEecCCchHHHHHHHHhcCCC
Confidence 35567899999999999999999999999999999764 57889999999999999999999999999999999887777
Q ss_pred eeccccCCccccchhchHHHHHHcCCcEEeeccccccccccccccCCCCchhhhhcCCCCCchhhHHHHHHHHHHHHHHH
Q 025789 86 AVQMEYSLWTREIEDDIIPLCRELGIGIVAYSPLGRGFFAGKAVVESLPSESILAMHPRFSGENLEKNKLLYTRLETLAA 165 (248)
Q Consensus 86 ~~q~~~~~~~~~~~~~~~~~~~~~gi~v~~~~~l~~G~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ia~ 165 (248)
.+|++|++..+..+.+++++|+++||++++|+||++|.|+++ ..+.++|+
T Consensus 197 ~~~nq~~~~~~~~~~~ll~~c~~~gI~v~a~sPL~~G~L~~~------------------------------~~~~~ia~ 246 (314)
T 3b3d_A 197 PMINQVEFHPRLTQKELIRYCQNQGIQMEAWSPLMQGQLLDH------------------------------PVLADIAQ 246 (314)
T ss_dssp CSEEEEECBTTBCCHHHHHHHHHHTCEEEEESTTGGGTTTTC------------------------------HHHHHHHH
T ss_pred eEEEEeccccccchHHHHHHHHHcCCEEEEeccccCCcccCc------------------------------hhhHHHHH
Confidence 677777776666668899999999999999999999998754 25778999
Q ss_pred HhCCCHHHHHHHHHHhCCCCceeecCCCChHhHHHhhcccCCCCCHHHHHHHHhhcCCCCC
Q 025789 166 KYGCTTPQLALAWLLHQGDDIVPIPGTTKITNLDNNIGSLALKLKEEDLKEICKTIPVDEV 226 (248)
Q Consensus 166 ~~~~s~~q~al~~~l~~~~v~~~i~G~~~~~~l~enl~a~~~~Lt~~~~~~l~~~~~~~~~ 226 (248)
++|+|++|+||+|++++|. ++|+|+++++||++|++++++.||++|+++|+++.+..+.
T Consensus 247 ~~g~t~aqvaL~w~l~~~~--v~I~G~~~~~~l~eNl~a~~~~Ls~ee~~~ld~l~~~~r~ 305 (314)
T 3b3d_A 247 TYNKSVAQIILRWDLQHGI--ITIPKSTKEHRIKENASVFDFELTQDDMNRIDALNENLRV 305 (314)
T ss_dssp HTTCCHHHHHHHHHHHTTC--EECCBCCCHHHHHHHHCCSSCCCCHHHHHHHHTTCCCCCC
T ss_pred HcCCCHHHHHHHHHHhCCC--EEEECCCCHHHHHHHHHhcCCCCCHHHHHHHhccCCCCCC
Confidence 9999999999999999997 6899999999999999999999999999999999876554
No 19
>3o3r_A Aldo-keto reductase family 1, member B7; aldose reductase like protein, AKR1B14, oxidoreductase; HET: NAP; 1.86A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 3qkz_A*
Probab=100.00 E-value=1.4e-43 Score=306.47 Aligned_cols=210 Identities=23% Similarity=0.349 Sum_probs=175.5
Q ss_pred CCCCCHHHHHHHHHHHHhHcCCCcccEEEeccCC-------------------CCCCHHHHHHHHHHHHHcCcccEEecc
Q 025789 8 GVKGSPEYVRKCCEASLKRLDVDYIDLYYQHRVD-------------------TSVSIEDTMGELKKLVEEGKIKYIGLS 68 (248)
Q Consensus 8 ~~~~s~~~i~~~~e~SL~rL~~d~iDl~~lH~~~-------------------~~~~~~~~~~~l~~l~~~G~ir~iGvS 68 (248)
...++++.+++++++||+||||||||+|+||||+ ...+.+++|++|++|+++||||+||||
T Consensus 81 ~~~~~~~~i~~~~~~SL~rL~~dyiDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~al~~l~~~Gkir~iGvS 160 (316)
T 3o3r_A 81 STFFEKSLMKEAFQKTLSDLKLDYLDLYLIHWPQGLQAGKEFLPKDSQGKVLMSKSTFLDAWEGMEELVDQGLVKALGVS 160 (316)
T ss_dssp GGGCSHHHHHHHHHHHHHHHTCSCEEEEEESCSSCBCCSSCSSCBCTTSCBCBCSCCHHHHHHHHHHHHHTTSEEEEEEE
T ss_pred CCcCCHHHHHHHHHHHHHHcCCCeeeEEEEcCCccccCcccccccccccccccccccHHHHHHHHHHHHHcCCCcEEEEe
Confidence 3457899999999999999999999999999996 346789999999999999999999999
Q ss_pred CCcHHHHHHHhccC----CcceeccccCCccccchhchHHHHHHcCCcEEeeccccccccccccccCCCCchhhhhcCCC
Q 025789 69 EASADTIRRAHAVH----PITAVQMEYSLWTREIEDDIIPLCRELGIGIVAYSPLGRGFFAGKAVVESLPSESILAMHPR 144 (248)
Q Consensus 69 ~~~~~~l~~~~~~~----~~~~~q~~~~~~~~~~~~~~~~~~~~~gi~v~~~~~l~~G~l~g~~~~~~~~~~~~~~~~~~ 144 (248)
||++++++++++.. +++++|++||++.+ +.+++++|+++||++++|+||++|... ... +. .+.
T Consensus 161 n~~~~~l~~~~~~~~~~~~p~~~Q~~~~~~~~--~~~l~~~~~~~gi~v~a~spL~~G~~~--~~~---~~------~~~ 227 (316)
T 3o3r_A 161 NFNHFQIERLLNKPGLKHKPVTNQVECHPYLT--QEKLIQYCHSKGIAVIAYSPLGSPDRP--YAK---PE------DPV 227 (316)
T ss_dssp SCCHHHHHHHHTCTTCCSCCCEEEEECBTTBC--CHHHHHHHHTTTCEEEEECTTCCTTCT--TCC---TT------SCC
T ss_pred cCCHHHHHHHHHhCCCCCCceEeeccCCcccc--hHHHHHHHHHcCCEEEEecccCCCCCc--ccc---cc------chh
Confidence 99999999998753 47899999999887 478999999999999999999998311 000 00 000
Q ss_pred CCchhhHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHhCCCCceeecCCCChHhHHHhhcccCCCCCHHHHHHHHhhcCCC
Q 025789 145 FSGENLEKNKLLYTRLETLAAKYGCTTPQLALAWLLHQGDDIVPIPGTTKITNLDNNIGSLALKLKEEDLKEICKTIPVD 224 (248)
Q Consensus 145 ~~~~~~~~~~~~~~~l~~ia~~~~~s~~q~al~~~l~~~~v~~~i~G~~~~~~l~enl~a~~~~Lt~~~~~~l~~~~~~~ 224 (248)
+. ..+.+.++|+++|+|++|+||+|+++++. ++|+|+++++||++|+++++++||++++++|+++.+..
T Consensus 228 ~~---------~~~~l~~ia~~~g~t~aqvaL~w~l~~~~--~vi~g~~~~~~l~en~~a~~~~L~~ee~~~l~~l~~~~ 296 (316)
T 3o3r_A 228 VL---------EIPKIKEIAAKHKKTIAQVLIRFHVQRNV--AVIPKSVTLSHIKENIQVFDFQLSEEDMAAILSLNRNW 296 (316)
T ss_dssp ST---------TCHHHHHHHHHHTCCHHHHHHHHHHTTTC--EECCBCCSHHHHHHHTCCSSCCCCHHHHHHHHTTCCCC
T ss_pred hh---------cCHHHHHHHHHhCCCHHHHHHHHHHhCCC--EEeCCCCCHHHHHHHHhhCCCCcCHHHHHHHHccccCC
Confidence 00 01489999999999999999999999985 79999999999999999999999999999999999877
Q ss_pred CCCCCCCCccccccccccc
Q 025789 225 EVGGHRDYSNLSGYGYKFA 243 (248)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~ 243 (248)
+......+.. +..+.|+
T Consensus 297 r~~~~~~~~~--~~~~pf~ 313 (316)
T 3o3r_A 297 RACGLFVTSD--EEDFPFH 313 (316)
T ss_dssp CCCSCGGGTT--STTCGGG
T ss_pred cccccccccc--CCCCCCC
Confidence 7665444333 3444443
No 20
>4f40_A Prostaglandin F2-alpha synthase/D-arabinose dehyd; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: CIT; 1.60A {Leishmania major} PDB: 4g5d_A*
Probab=100.00 E-value=1e-43 Score=303.36 Aligned_cols=184 Identities=25% Similarity=0.374 Sum_probs=166.9
Q ss_pred CCCCCHHHHHHHHHHHHhHcCCCcccEEEeccCCCC-------CCHHHHHHHHHHHHHcCcccEEeccCCcHHHHHHHhc
Q 025789 8 GVKGSPEYVRKCCEASLKRLDVDYIDLYYQHRVDTS-------VSIEDTMGELKKLVEEGKIKYIGLSEASADTIRRAHA 80 (248)
Q Consensus 8 ~~~~s~~~i~~~~e~SL~rL~~d~iDl~~lH~~~~~-------~~~~~~~~~l~~l~~~G~ir~iGvS~~~~~~l~~~~~ 80 (248)
..+++++.+++++++||+||||||||+|++|||+.. .+.+++|++|++++++||||+||||||+++++++++.
T Consensus 86 ~~~~~~~~i~~~~~~SL~rLg~dyiDl~llH~p~~~~~~~~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~ 165 (288)
T 4f40_A 86 NTEQGYESTLAAFEESRQKLGVDYIDLYLIHWPRGKDILSKEGKKYLDSWRAFEQLYKEKKVRAIGVSNFHIHHLEDVLA 165 (288)
T ss_dssp GGGCSHHHHHHHHHHHHHHHTCSCEEEEEECCCCCHHHHHHHCCHHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHT
T ss_pred CCcCCHHHHHHHHHHHHHHhCCCcEEEEEEecCCCCcccccccccHHHHHHHHHHHHHcCCccEEEeccCCHHHHHHHHH
Confidence 456789999999999999999999999999999863 5678999999999999999999999999999999987
Q ss_pred c--CCcceeccccCCccccchhchHHHHHHcCCcEEeeccccccccccccccCCCCchhhhhcCCCCCchhhHHHHHHHH
Q 025789 81 V--HPITAVQMEYSLWTREIEDDIIPLCRELGIGIVAYSPLGRGFFAGKAVVESLPSESILAMHPRFSGENLEKNKLLYT 158 (248)
Q Consensus 81 ~--~~~~~~q~~~~~~~~~~~~~~~~~~~~~gi~v~~~~~l~~G~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (248)
. .+++++|++||++++. .+++++|+++||++++|+||++|.+.+. +
T Consensus 166 ~~~~~~~~~Q~~~~~~~~~--~~l~~~~~~~gi~v~a~spl~~G~l~~~------------------------------~ 213 (288)
T 4f40_A 166 MCTVTPMVNQVELHPLNNQ--ADLRAFCDAKQIKVEAWSPLGQGKLLSN------------------------------P 213 (288)
T ss_dssp TCSSCCCEEEEECBTTBCC--HHHHHHHHHTTCEEEEESTTC--CGGGC------------------------------H
T ss_pred hCCCCCeEEeccCccccCC--HHHHHHHHHCCCEEEEecCCCCCccccc------------------------------H
Confidence 5 5689999999999985 6799999999999999999999976532 2
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHhCCCCceeecCCCChHhHHHhhcccCCCCCHHHHHHHHhhcCCCC
Q 025789 159 RLETLAAKYGCTTPQLALAWLLHQGDDIVPIPGTTKITNLDNNIGSLALKLKEEDLKEICKTIPVDE 225 (248)
Q Consensus 159 ~l~~ia~~~~~s~~q~al~~~l~~~~v~~~i~G~~~~~~l~enl~a~~~~Lt~~~~~~l~~~~~~~~ 225 (248)
.+.++|+++|+|++|+||+|+++++. ++|+|+++++|+++|+++++++||++++++|+++.+..+
T Consensus 214 ~l~~ia~~~g~t~aqvaL~w~l~~~~--~~i~g~~~~~~l~en~~~~~~~L~~ee~~~i~~l~~~~r 278 (288)
T 4f40_A 214 ILSAIGAKYNKTAAQVILRWNIQKNL--ITIPKSVHRERIEENADIFDFELGAEDVMSIDALNTNSR 278 (288)
T ss_dssp HHHHHHHHHTCCHHHHHHHHHHHTTC--EECCBCSSHHHHHHHHCCSSCCCCHHHHHHHHTTCCCCC
T ss_pred HHHHHHHHhCCCHHHHHHHHHHhCCC--eEeeCCCCHHHHHHHhhhcCCCCCHHHHHHHHhhccCCc
Confidence 78999999999999999999999994 899999999999999999999999999999999987544
No 21
>3f7j_A YVGN protein; aldo-keto reductase, oxidoreductase; 1.70A {Bacillus subtilis} PDB: 3d3f_A*
Probab=100.00 E-value=1.4e-43 Score=300.70 Aligned_cols=184 Identities=28% Similarity=0.396 Sum_probs=167.9
Q ss_pred CCCCCHHHHHHHHHHHHhHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCcccEEeccCCcHHHHHHHhcc--CCcc
Q 025789 8 GVKGSPEYVRKCCEASLKRLDVDYIDLYYQHRVDTSVSIEDTMGELKKLVEEGKIKYIGLSEASADTIRRAHAV--HPIT 85 (248)
Q Consensus 8 ~~~~s~~~i~~~~e~SL~rL~~d~iDl~~lH~~~~~~~~~~~~~~l~~l~~~G~ir~iGvS~~~~~~l~~~~~~--~~~~ 85 (248)
..+++++.+++++++||+||||||||+|++|||+... .+++|++|++++++||||+||||||+++++++++.. .++.
T Consensus 82 ~~~~~~~~v~~~~~~SL~rLg~dyiDl~~lH~p~~~~-~~~~~~~l~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~ 160 (276)
T 3f7j_A 82 NEDQGYETTLAAFEKSLERLQLDYLDLYLIHWPGKDK-YKDTWRALEKLYKDGKIRAIGVSNFQVHHLEELLKDAEIKPM 160 (276)
T ss_dssp GGGCSHHHHHHHHHHHHHHHTCSCEEEEEESCCCSSS-HHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHCSSCCS
T ss_pred CCCCCHHHHHHHHHHHHHHhCCCeeEEEEEecCCCCc-HHHHHHHHHHHHHcCCccEEEeccCCHHHHHHHHHhcCCCce
Confidence 3467899999999999999999999999999998765 889999999999999999999999999999998765 4567
Q ss_pred eeccccCCccccchhchHHHHHHcCCcEEeeccccccccccccccCCCCchhhhhcCCCCCchhhHHHHHHHHHHHHHHH
Q 025789 86 AVQMEYSLWTREIEDDIIPLCRELGIGIVAYSPLGRGFFAGKAVVESLPSESILAMHPRFSGENLEKNKLLYTRLETLAA 165 (248)
Q Consensus 86 ~~q~~~~~~~~~~~~~~~~~~~~~gi~v~~~~~l~~G~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ia~ 165 (248)
++|++||++.+. .+++++|+++||++++|+||++|.|.+. +.+.++|+
T Consensus 161 ~~Q~~~~~~~~~--~~l~~~~~~~gi~v~a~spl~~G~l~~~------------------------------~~l~~ia~ 208 (276)
T 3f7j_A 161 VNQVEFHPRLTQ--KELRDYCKGQGIQLEAWSPLMQGQLLDN------------------------------EVLTQIAE 208 (276)
T ss_dssp EEEEECBTTBCC--HHHHHHHHHHTCEEEEESTTGGGTTTTC------------------------------HHHHHHHH
T ss_pred eeeeeeccccCC--HHHHHHHHHCCCEEEEecCCCCCccCCC------------------------------HHHHHHHH
Confidence 999999999874 6899999999999999999999975421 37899999
Q ss_pred HhCCCHHHHHHHHHHhCCCCceeecCCCChHhHHHhhcccCCCCCHHHHHHHHhhcCCCCC
Q 025789 166 KYGCTTPQLALAWLLHQGDDIVPIPGTTKITNLDNNIGSLALKLKEEDLKEICKTIPVDEV 226 (248)
Q Consensus 166 ~~~~s~~q~al~~~l~~~~v~~~i~G~~~~~~l~enl~a~~~~Lt~~~~~~l~~~~~~~~~ 226 (248)
++|+|++|+||+|+++++. ++|+|+++++|+++|+++++++||++++++|+++.+..+.
T Consensus 209 ~~g~t~aqval~w~l~~~~--v~i~g~~~~~~l~en~~a~~~~L~~e~~~~l~~l~~~~r~ 267 (276)
T 3f7j_A 209 KHNKSVAQVILRWDLQHGV--VTIPKSIKEHRIIENADIFDFELSQEDMDKIDALNKDERV 267 (276)
T ss_dssp HHTCCHHHHHHHHHHHTTC--EECCBCCSHHHHHHHTCCSSCCCCHHHHHHHHTTCCCCCS
T ss_pred HhCCCHHHHHHHHHHhCCC--EEeeCCCCHHHHHHHHhhCCCCCCHHHHHHHHhhccCCcc
Confidence 9999999999999999997 6899999999999999999999999999999999876543
No 22
>4gie_A Prostaglandin F synthase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: NAP; 1.25A {Trypanosoma cruzi} PDB: 4fzi_A*
Probab=100.00 E-value=1.5e-43 Score=302.63 Aligned_cols=188 Identities=27% Similarity=0.374 Sum_probs=165.4
Q ss_pred CCCCCCHHHHHHHHHHHHhHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCcccEEeccCCcHHHHHHHhccCCc--
Q 025789 7 IGVKGSPEYVRKCCEASLKRLDVDYIDLYYQHRVDTSVSIEDTMGELKKLVEEGKIKYIGLSEASADTIRRAHAVHPI-- 84 (248)
Q Consensus 7 ~~~~~s~~~i~~~~e~SL~rL~~d~iDl~~lH~~~~~~~~~~~~~~l~~l~~~G~ir~iGvS~~~~~~l~~~~~~~~~-- 84 (248)
+..+.+++.+++++++||+||||||||+|+||||+. .+..|+|++|++|+++||||+||+|||+++++.++.....+
T Consensus 88 ~~~~~~~~~~~~~~e~SL~rL~~dyiDly~lH~p~~-~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~ 166 (290)
T 4gie_A 88 WNSDQGYEKTLAAFERSRELLGLEYIDLYLIHWPGK-KKFVDTWKALEKLYEEKKVRAIGVSNFEPHHLTELFKSCKIRP 166 (290)
T ss_dssp CGGGCSHHHHHHHHHHHHHHHTCSCEEEEEECCCCS-SSHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHTTCSSCC
T ss_pred cccCCChHHHHHHHHHHHHHhCCCceeeEEecCCCC-CcchHHHHHHHHHHHCCCcceeeecCCCHHHHHHHHHhccCCC
Confidence 456788999999999999999999999999999876 46889999999999999999999999999999999887544
Q ss_pred ceeccccCCccccchhchHHHHHHcCCcEEeeccccccccccccccCCCCchhhhhcCCCCCchhhHHHHHHHHHHHHHH
Q 025789 85 TAVQMEYSLWTREIEDDIIPLCRELGIGIVAYSPLGRGFFAGKAVVESLPSESILAMHPRFSGENLEKNKLLYTRLETLA 164 (248)
Q Consensus 85 ~~~q~~~~~~~~~~~~~~~~~~~~~gi~v~~~~~l~~G~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ia 164 (248)
.++|+++++... +.+++++|+++||++++|+||++|.+++.... +.+.++|
T Consensus 167 ~~~q~~~~~~~~--~~~l~~~~~~~gi~~~a~spl~~G~l~~~~~~---------------------------~~l~~iA 217 (290)
T 4gie_A 167 MVNQVELHPLFQ--QRTLREFCKQHNIAITAWSPLGSGEEAGILKN---------------------------HVLGEIA 217 (290)
T ss_dssp SEEEEECBTTBC--CHHHHHHHHHTTCEEEEESTTCSSGGGCGGGC---------------------------HHHHHHH
T ss_pred ceeeEeccccch--hHHHHHHHHHcCceEeeecccccccccccchh---------------------------HHHHHHH
Confidence 455555554443 57899999999999999999999988754211 3789999
Q ss_pred HHhCCCHHHHHHHHHHhCCCCceeecCCCChHhHHHhhcccCCCCCHHHHHHHHhhcCCCCC
Q 025789 165 AKYGCTTPQLALAWLLHQGDDIVPIPGTTKITNLDNNIGSLALKLKEEDLKEICKTIPVDEV 226 (248)
Q Consensus 165 ~~~~~s~~q~al~~~l~~~~v~~~i~G~~~~~~l~enl~a~~~~Lt~~~~~~l~~~~~~~~~ 226 (248)
+++|+|++|+||+|++++|. ++|+|+++++||++|+++++++||++|+++|+++.+..+.
T Consensus 218 ~~~g~t~aqvaL~w~l~~~~--v~I~G~~~~~~l~eNl~a~~~~Ls~ee~~~ld~l~~~~r~ 277 (290)
T 4gie_A 218 KKHNKSPAQVVIRWDIQHGI--VTIPKSTNKGRIQENFNVWDFKLTEEEMRQIDELNEDKRI 277 (290)
T ss_dssp HHHTCCHHHHHHHHHHHTTC--EECCBCCSHHHHHHHHCCSSCCCCHHHHHHHHTTCCCCCC
T ss_pred HHhCCCHHHHHHHHHHhCCC--EEEECCCCHHHHHHHHhhcCCCCCHHHHHHHhccCCCCCc
Confidence 99999999999999999997 6899999999999999999999999999999999876543
No 23
>3b3e_A YVGN protein; aldo-keto reductase, oxidoreductase; 1.80A {Bacillus subtilis} PDB: 3b3d_A
Probab=100.00 E-value=2.7e-43 Score=303.17 Aligned_cols=184 Identities=28% Similarity=0.396 Sum_probs=168.0
Q ss_pred CCCCCHHHHHHHHHHHHhHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCcccEEeccCCcHHHHHHHhcc--CCcc
Q 025789 8 GVKGSPEYVRKCCEASLKRLDVDYIDLYYQHRVDTSVSIEDTMGELKKLVEEGKIKYIGLSEASADTIRRAHAV--HPIT 85 (248)
Q Consensus 8 ~~~~s~~~i~~~~e~SL~rL~~d~iDl~~lH~~~~~~~~~~~~~~l~~l~~~G~ir~iGvS~~~~~~l~~~~~~--~~~~ 85 (248)
..+++++.+++++++||+||||||||+|+||||+... .+++|++|++++++||||+||||||++++++++++. .++.
T Consensus 116 ~~~~~~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~~-~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~p~ 194 (310)
T 3b3e_A 116 NEDQGYETTLAAFEKSLERLQLDYLDLYLIHWPGKDK-YKDTWRALEKLYKDGKIRAIGVSNFQVHHLEELLKDAEIKPM 194 (310)
T ss_dssp GGGCSHHHHHHHHHHHHHHHTCSCEEEEEESCCCSSC-HHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHCSSCCS
T ss_pred CCCCCHHHHHHHHHHHHHHhCCCeeEEEEeeCCCccc-HHHHHHHHHHHHHcCCcceEeecCCCHHHHHHHHHhcCCCcc
Confidence 3467899999999999999999999999999998765 889999999999999999999999999999998765 4568
Q ss_pred eeccccCCccccchhchHHHHHHcCCcEEeeccccccccccccccCCCCchhhhhcCCCCCchhhHHHHHHHHHHHHHHH
Q 025789 86 AVQMEYSLWTREIEDDIIPLCRELGIGIVAYSPLGRGFFAGKAVVESLPSESILAMHPRFSGENLEKNKLLYTRLETLAA 165 (248)
Q Consensus 86 ~~q~~~~~~~~~~~~~~~~~~~~~gi~v~~~~~l~~G~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ia~ 165 (248)
++|++||++.+. .+++++|+++||++++|+||++|.|.+. +.+.++|+
T Consensus 195 ~~Q~~~~~~~~~--~~l~~~~~~~gi~v~a~spL~~G~l~~~------------------------------~~l~~iA~ 242 (310)
T 3b3e_A 195 VNQVEFHPRLTQ--KELRDYCKGQGIQLEAWSPLMQGQLLDN------------------------------EVLTQIAE 242 (310)
T ss_dssp EEEEECBTTBCC--HHHHHHHHHHTCEEEEESTTGGGTTTTC------------------------------HHHHHHHH
T ss_pred eeeeeccCccCC--HHHHHHHHHcCCEEEEeccccCCCcCCC------------------------------HHHHHHHH
Confidence 999999999874 6899999999999999999999976421 37899999
Q ss_pred HhCCCHHHHHHHHHHhCCCCceeecCCCChHhHHHhhcccCCCCCHHHHHHHHhhcCCCCC
Q 025789 166 KYGCTTPQLALAWLLHQGDDIVPIPGTTKITNLDNNIGSLALKLKEEDLKEICKTIPVDEV 226 (248)
Q Consensus 166 ~~~~s~~q~al~~~l~~~~v~~~i~G~~~~~~l~enl~a~~~~Lt~~~~~~l~~~~~~~~~ 226 (248)
++|+|++|+||+|+++++. ++|+|+++++||++|+++++++||++|+++|+++.+..+.
T Consensus 243 ~~g~t~aqvaL~w~l~~~~--v~I~gs~~~~~l~en~~a~~~~Ls~ee~~~l~~l~~~~r~ 301 (310)
T 3b3e_A 243 KHNKSVAQVILRWDLQHGV--VTIPKSIKEHRIIENADIFDFELSQEDMDKIDALNKDERV 301 (310)
T ss_dssp HHTCCHHHHHHHHHHHTTC--EECCBCCSHHHHHHHTCCSSCCCCHHHHHHHHTTCCCCCS
T ss_pred HhCCCHHHHHHHHHHcCCC--eEEeCCCCHHHHHHHHHhccCCCCHHHHHHHHhhhhCCcc
Confidence 9999999999999999997 5899999999999999999999999999999999876543
No 24
>1vbj_A Prostaglandin F synthase; TIM barrel, oxidoreductase; HET: NAP CIT; 2.10A {Trypanosoma brucei}
Probab=100.00 E-value=3.7e-43 Score=298.76 Aligned_cols=182 Identities=25% Similarity=0.409 Sum_probs=166.2
Q ss_pred CCCCHHHHHHHHHHHHhHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCcccEEeccCCcHHHHHHHhcc--CCcce
Q 025789 9 VKGSPEYVRKCCEASLKRLDVDYIDLYYQHRVDTSVSIEDTMGELKKLVEEGKIKYIGLSEASADTIRRAHAV--HPITA 86 (248)
Q Consensus 9 ~~~s~~~i~~~~e~SL~rL~~d~iDl~~lH~~~~~~~~~~~~~~l~~l~~~G~ir~iGvS~~~~~~l~~~~~~--~~~~~ 86 (248)
.+++++.+++++++||+||||||||+|+||||+ ..+.+++|++|++++++||||+||||||++++++++++. .++++
T Consensus 86 ~~~~~~~v~~~~~~SL~rL~~dyiDl~~lH~p~-~~~~~~~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~p~~ 164 (281)
T 1vbj_A 86 SDQGYESTLSAFEKSIKKLGLEYVDLYLIHWPG-KDKFIDTWKAFEKLYADKKVRAIGVSNFHEHHIEELLKHCKVAPMV 164 (281)
T ss_dssp GGCSHHHHHHHHHHHHHHHTCSCBSEEEESCCC-SSCHHHHHHHHHHHHHTTSBSCEEEESCCHHHHHHHHTSCSSCCSE
T ss_pred CCCCHHHHHHHHHHHHHHhCCCcEEEEEEcCCC-CCCHHHHHHHHHHHHHCCCccEEEeeCCCHHHHHHHHHhCCCCcee
Confidence 467899999999999999999999999999998 667899999999999999999999999999999999875 45689
Q ss_pred eccccCCccccchhchHHHHHHcCCcEEeeccccccccccccccCCCCchhhhhcCCCCCchhhHHHHHHHHHHHHHHHH
Q 025789 87 VQMEYSLWTREIEDDIIPLCRELGIGIVAYSPLGRGFFAGKAVVESLPSESILAMHPRFSGENLEKNKLLYTRLETLAAK 166 (248)
Q Consensus 87 ~q~~~~~~~~~~~~~~~~~~~~~gi~v~~~~~l~~G~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ia~~ 166 (248)
+|++||++++. .+++++|+++||++++|+||++|.+... +.+.++|++
T Consensus 165 ~Q~~~~~~~~~--~~l~~~~~~~gi~v~a~spL~~G~~~~~------------------------------~~l~~ia~~ 212 (281)
T 1vbj_A 165 NQIELHPLLNQ--KALCEYCKSKNIAVTAWSPLGQGHLVED------------------------------ARLKAIGGK 212 (281)
T ss_dssp EEEECBTTBCC--HHHHHHHHHTTCEEEEESTTGGGTTTTC------------------------------HHHHHHHHT
T ss_pred eeEEeccccCC--HHHHHHHHHcCCEEEEecCCcCCCCCCC------------------------------HHHHHHHHH
Confidence 99999999875 5799999999999999999999842100 278999999
Q ss_pred hCCCHHHHHHHHHHhCCCCceeecCCCChHhHHHhhcccCCCCCHHHHHHHHhhcCCCC
Q 025789 167 YGCTTPQLALAWLLHQGDDIVPIPGTTKITNLDNNIGSLALKLKEEDLKEICKTIPVDE 225 (248)
Q Consensus 167 ~~~s~~q~al~~~l~~~~v~~~i~G~~~~~~l~enl~a~~~~Lt~~~~~~l~~~~~~~~ 225 (248)
+|+|++|+||+|+++++. ++|+|+++++||++|+++++++||++++++|+++.+..+
T Consensus 213 ~g~s~aqvaL~w~l~~~~--~~I~g~~~~~~l~en~~a~~~~L~~e~~~~l~~~~~~~~ 269 (281)
T 1vbj_A 213 YGKTAAQVMLRWEIQAGV--ITIPKSGNEARIKENGNIFDFELTAEDIQVIDGMNAGHR 269 (281)
T ss_dssp TTCCHHHHHHHHHHHTTC--EECCBCSCHHHHHHHHCCSSCCCCHHHHHHHHTTCCCCC
T ss_pred hCCCHHHHHHHHHHHCCC--EEecCCCCHHHHHHHHhhcCCCCCHHHHHHHHHhhccCC
Confidence 999999999999999974 899999999999999999999999999999999987644
No 25
>3buv_A 3-OXO-5-beta-steroid 4-dehydrogenase; 5-beta-reductase, catalytic tetrad, hepes, NADP, bIle catabolism, disease mutation, lipid metabolism; HET: NAP EPE; 1.35A {Homo sapiens} PDB: 3bur_A* 3bv7_A* 3caq_A* 3cas_A* 3cav_A* 3g1r_A* 3cot_A* 3dop_A* 3cmf_A* 3uzx_A* 3uzw_A* 3uzy_A* 3uzz_A*
Probab=100.00 E-value=4.3e-43 Score=304.51 Aligned_cols=196 Identities=25% Similarity=0.355 Sum_probs=169.6
Q ss_pred CCCCHHHHHHHHHHHHhHcCCCcccEEEeccCCC-------------------CCCHHHHHHHHHHHHHcCcccEEeccC
Q 025789 9 VKGSPEYVRKCCEASLKRLDVDYIDLYYQHRVDT-------------------SVSIEDTMGELKKLVEEGKIKYIGLSE 69 (248)
Q Consensus 9 ~~~s~~~i~~~~e~SL~rL~~d~iDl~~lH~~~~-------------------~~~~~~~~~~l~~l~~~G~ir~iGvS~ 69 (248)
.+++++.+++++++||+||||||||+|+||||+. ..+.+++|++|++|+++||||+|||||
T Consensus 91 ~~~~~~~v~~~~~~SL~rL~~dyiDl~llH~p~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ale~l~~~Gkir~iGvSn 170 (326)
T 3buv_A 91 TNHVPEMVRPTLERTLRVLQLDYVDLYIIEVPMAFKPGDEIYPRDENGKWLYHKSNLCATWEAMEACKDAGLVKSLGVSN 170 (326)
T ss_dssp GGCSHHHHHHHHHHHHHHHTCSCEEEEEESCSCCBCCSSCSSCBCTTCCBCBCCCCHHHHHHHHHHHHHTTSEEEEEEES
T ss_pred CcCCHHHHHHHHHHHHHHhCCCceeEEEEccCCccCCccccCccccccccccccccHHHHHHHHHHHHHcCCccEEEEeC
Confidence 4678999999999999999999999999999963 236789999999999999999999999
Q ss_pred CcHHHHHHHhccC--C--cceeccccCCccccchhchHHHHHHcCCcEEeeccccccccccccccCCCCchhhhhcCCCC
Q 025789 70 ASADTIRRAHAVH--P--ITAVQMEYSLWTREIEDDIIPLCRELGIGIVAYSPLGRGFFAGKAVVESLPSESILAMHPRF 145 (248)
Q Consensus 70 ~~~~~l~~~~~~~--~--~~~~q~~~~~~~~~~~~~~~~~~~~~gi~v~~~~~l~~G~l~g~~~~~~~~~~~~~~~~~~~ 145 (248)
|++++++++++.. + ++++|++||++.+. .+++++|+++||++++|+||++|.++ +..... . |.+
T Consensus 171 ~~~~~l~~~~~~~~~~~~p~~~Q~~~~~~~~~--~~l~~~~~~~gI~v~a~spL~~G~l~-~~~~~~--~-------~~~ 238 (326)
T 3buv_A 171 FNRRQLELILNKPGLKHKPVSNQVECHPYFTQ--PKLLKFCQQHDIVITAYSPLGTSRNP-IWVNVS--S-------PPL 238 (326)
T ss_dssp CCHHHHHHHHTCTTCCSCCCEEEEECBTTBCC--HHHHHHHHHTTCEEEEESTTCCCCCT-TTSCTT--S-------CCG
T ss_pred CCHHHHHHHHHhCCCCCCCeeeeeecccccCc--HHHHHHHHHcCCEEEEeccccCCccc-cccccC--C-------ccc
Confidence 9999999998763 3 67999999998874 67999999999999999999999876 311100 0 100
Q ss_pred CchhhHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHhCCCCceeecCCCChHhHHHhhcccCCCCCHHHHHHHHhhcCCCC
Q 025789 146 SGENLEKNKLLYTRLETLAAKYGCTTPQLALAWLLHQGDDIVPIPGTTKITNLDNNIGSLALKLKEEDLKEICKTIPVDE 225 (248)
Q Consensus 146 ~~~~~~~~~~~~~~l~~ia~~~~~s~~q~al~~~l~~~~v~~~i~G~~~~~~l~enl~a~~~~Lt~~~~~~l~~~~~~~~ 225 (248)
. ..+.+.++|+++|+|++|+||+|+++++. ++|+|+++++||++|+++++++||++++++|+++.+..+
T Consensus 239 ----~-----~~~~l~~ia~~~g~s~aqvaL~w~l~~~~--~~I~g~~~~~~l~en~~~~~~~L~~e~~~~l~~~~~~~~ 307 (326)
T 3buv_A 239 ----L-----KDALLNSLGKRYNKTAAQIVLRFNIQRGV--VVIPKSFNLERIKENFQIFDFSLTEEEMKDIEALNKNVR 307 (326)
T ss_dssp ----G-----GCHHHHHHHHHHTCCHHHHHHHHHHHTTC--EECCBCCSHHHHHHHHCCSSCCCCHHHHHHHHTTCCSCC
T ss_pred ----c-----ccHHHHHHHHHhCCCHHHHHHHHHHhCCC--EEEeCCCCHHHHHHHHhhcCCCCCHHHHHHHHHhccCCc
Confidence 0 12488999999999999999999999984 899999999999999999999999999999999987655
Q ss_pred CC
Q 025789 226 VG 227 (248)
Q Consensus 226 ~~ 227 (248)
..
T Consensus 308 ~~ 309 (326)
T 3buv_A 308 FV 309 (326)
T ss_dssp SC
T ss_pred cc
Confidence 44
No 26
>1afs_A 3-alpha-HSD, 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, NAD; HET: NAP TES; 2.50A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 1lwi_A*
Probab=100.00 E-value=3.7e-43 Score=304.56 Aligned_cols=196 Identities=27% Similarity=0.348 Sum_probs=169.9
Q ss_pred CCCCHHHHHHHHHHHHhHcCCCcccEEEeccCCC-------------------CCCHHHHHHHHHHHHHcCcccEEeccC
Q 025789 9 VKGSPEYVRKCCEASLKRLDVDYIDLYYQHRVDT-------------------SVSIEDTMGELKKLVEEGKIKYIGLSE 69 (248)
Q Consensus 9 ~~~s~~~i~~~~e~SL~rL~~d~iDl~~lH~~~~-------------------~~~~~~~~~~l~~l~~~G~ir~iGvS~ 69 (248)
.+++++.+++++++||+||||||||+|+||||+. ..+.+++|++|++|+++||||+|||||
T Consensus 88 ~~~~~~~v~~~~~~SL~rLg~dyiDl~llH~p~~~~~~~~~~~~d~~~~~~~~~~~~~e~~~ale~l~~~Gkir~iGvSn 167 (323)
T 1afs_A 88 TFHRPELVRTCLEKTLKSTQLDYVDLYIIHFPMALQPGDIFFPRDEHGKLLFETVDICDTWEAMEKCKDAGLAKSIGVSN 167 (323)
T ss_dssp GGCSTTTHHHHHHHHHHHHCCSSEEEEEESCSCEECSSSSSSCBCTTCCBCEECCCHHHHHHHHHHHHHTTSEEEEEEES
T ss_pred CcCCHHHHHHHHHHHHHHhCCCceeEEEecCcCcCCCCcccCcccccccccccCCCHHHHHHHHHHHHHcCCcCEEEeeC
Confidence 4578899999999999999999999999999942 236789999999999999999999999
Q ss_pred CcHHHHHHHhccC----CcceeccccCCccccchhchHHHHHHcCCcEEeeccccccccccccccCCCCchhhhhcCCCC
Q 025789 70 ASADTIRRAHAVH----PITAVQMEYSLWTREIEDDIIPLCRELGIGIVAYSPLGRGFFAGKAVVESLPSESILAMHPRF 145 (248)
Q Consensus 70 ~~~~~l~~~~~~~----~~~~~q~~~~~~~~~~~~~~~~~~~~~gi~v~~~~~l~~G~l~g~~~~~~~~~~~~~~~~~~~ 145 (248)
|++++++++++.. +++++|++||++.+. .+++++|+++||++++|+||++|.|++-..+. . |.+
T Consensus 168 ~~~~~l~~~~~~~~~~~~p~~~Q~~~~~~~~~--~~l~~~~~~~gI~v~a~spL~~G~l~~~~~~~---~-------~~~ 235 (323)
T 1afs_A 168 FNCRQLERILNKPGLKYKPVCNQVECHLYLNQ--SKMLDYCKSKDIILVSYCTLGSSRDKTWVDQK---S-------PVL 235 (323)
T ss_dssp CCHHHHHHHHTCTTCCSCCSEEEEECBTTBCC--HHHHHHHHHHTCEEEEESTTSCCCCTTTSCTT---S-------CCG
T ss_pred CCHHHHHHHHHhcCcCCCCEEEeeccccccch--HHHHHHHHHcCCEEEEecCccCCccccccccC---C-------cch
Confidence 9999999998763 669999999998874 67999999999999999999999887521100 0 100
Q ss_pred CchhhHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHhCCCCceeecCCCChHhHHHhhcccCCCCCHHHHHHHHhhcCCCC
Q 025789 146 SGENLEKNKLLYTRLETLAAKYGCTTPQLALAWLLHQGDDIVPIPGTTKITNLDNNIGSLALKLKEEDLKEICKTIPVDE 225 (248)
Q Consensus 146 ~~~~~~~~~~~~~~l~~ia~~~~~s~~q~al~~~l~~~~v~~~i~G~~~~~~l~enl~a~~~~Lt~~~~~~l~~~~~~~~ 225 (248)
. ..+.+.++|+++|+|++|+||+|+++++. ++|+|+++++||++|+++++++||++++++|+++.+..+
T Consensus 236 ----~-----~~~~l~~ia~~~g~s~aqvaL~w~l~~~~--~vI~g~~~~~~l~en~~~~~~~L~~e~~~~l~~~~~~~~ 304 (323)
T 1afs_A 236 ----L-----DDPVLCAIAKKYKQTPALVALRYQLQRGV--VPLIRSFNAKRIKELTQVFEFQLASEDMKALDGLNRNFR 304 (323)
T ss_dssp ----G-----GCHHHHHHHHHTTCCHHHHHHHHHHHTTC--EEEECCSCHHHHHHHTTTTSCCCCHHHHHHHHTTCCCCC
T ss_pred ----h-----cCHHHHHHHHHhCCCHHHHHHHHHHhCCC--EEeeCCCCHHHHHHHHhhccCCCCHHHHHHHHhhcccCC
Confidence 0 12489999999999999999999999983 899999999999999999999999999999999987655
Q ss_pred CC
Q 025789 226 VG 227 (248)
Q Consensus 226 ~~ 227 (248)
..
T Consensus 305 ~~ 306 (323)
T 1afs_A 305 YN 306 (323)
T ss_dssp SC
T ss_pred cc
Confidence 44
No 27
>1us0_A Aldose reductase; oxidoreductase, NADP, IDD594; HET: NDP LDT CIT; 0.66A {Homo sapiens} SCOP: c.1.7.1 PDB: 1pwl_A* 1t41_A* 1pwm_A* 1x96_A* 1x97_A* 1x98_A* 1z89_A* 1z8a_A* 2dux_A* 2duz_A* 2dv0_A* 2fz8_A* 2fz9_A* 2fzb_A* 2fzd_A* 2hv5_A* 2hvn_A* 2hvo_A* 2i16_A* 2i17_A* ...
Probab=100.00 E-value=9.7e-43 Score=301.10 Aligned_cols=197 Identities=24% Similarity=0.354 Sum_probs=169.6
Q ss_pred CCCCCHHHHHHHHHHHHhHcCCCcccEEEeccCCC-------------------CCCHHHHHHHHHHHHHcCcccEEecc
Q 025789 8 GVKGSPEYVRKCCEASLKRLDVDYIDLYYQHRVDT-------------------SVSIEDTMGELKKLVEEGKIKYIGLS 68 (248)
Q Consensus 8 ~~~~s~~~i~~~~e~SL~rL~~d~iDl~~lH~~~~-------------------~~~~~~~~~~l~~l~~~G~ir~iGvS 68 (248)
..+++++.+++++++||+||||||||+|+||||+. ..+.+++|++|++|+++||||+||||
T Consensus 81 ~~~~~~~~v~~~~~~SL~rL~~dyiDl~llH~p~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ale~l~~~Gkir~iGvS 160 (316)
T 1us0_A 81 CTYHEKGLVKGACQKTLSDLKLDYLDLYLIHWPTGFKPGKEFFPLDESGNVVPSDTNILDTWAAMEELVDEGLVKAIGIS 160 (316)
T ss_dssp GGGCSHHHHHHHHHHHHHHHTCSCBSEEEESSSCCBCCSSCSSCBCTTSCBCBCSCCHHHHHHHHHHHHHTTSBSCEEEE
T ss_pred CCcCCHHHHHHHHHHHHHHhCCCceeeEEEecCccccccccccccccccccccccccHHHHHHHHHHHHHCCCccEEEEe
Confidence 34678999999999999999999999999999963 23678999999999999999999999
Q ss_pred CCcHHHHHHHhccC----CcceeccccCCccccchhchHHHHHHcCCcEEeeccccccccccccccCCCCchhhhhcCCC
Q 025789 69 EASADTIRRAHAVH----PITAVQMEYSLWTREIEDDIIPLCRELGIGIVAYSPLGRGFFAGKAVVESLPSESILAMHPR 144 (248)
Q Consensus 69 ~~~~~~l~~~~~~~----~~~~~q~~~~~~~~~~~~~~~~~~~~~gi~v~~~~~l~~G~l~g~~~~~~~~~~~~~~~~~~ 144 (248)
||++++++++++.. +++++|++||++.+. .+++++|+++||++++|+||++|.+. ..... .|.
T Consensus 161 n~~~~~l~~~~~~~~~~~~p~~~Q~~~~~~~~~--~~l~~~~~~~gI~v~a~spL~~G~l~--~~~~~---------~~~ 227 (316)
T 1us0_A 161 NFNHLQVEMILNKPGLKYKPAVNQIECHPYLTQ--EKLIQYCQSKGIVVTAYSPLGSPDRP--WAKPE---------DPS 227 (316)
T ss_dssp SCCHHHHHHHHTCTTCCSCCSEEEEECBTTBCC--HHHHHHHHHTTCEEEEESTTCCTTCT--TCCTT---------SCC
T ss_pred cCCHHHHHHHHHhCcccCCceeeehhcCCccCC--HHHHHHHHHcCCEEEEecccccCccc--cccCC---------Ccc
Confidence 99999999998763 569999999999874 67999999999999999999999762 10000 011
Q ss_pred CCchhhHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHhCCCCceeecCCCChHhHHHhhcccCCCCCHHHHHHHHhhcCCC
Q 025789 145 FSGENLEKNKLLYTRLETLAAKYGCTTPQLALAWLLHQGDDIVPIPGTTKITNLDNNIGSLALKLKEEDLKEICKTIPVD 224 (248)
Q Consensus 145 ~~~~~~~~~~~~~~~l~~ia~~~~~s~~q~al~~~l~~~~v~~~i~G~~~~~~l~enl~a~~~~Lt~~~~~~l~~~~~~~ 224 (248)
+. ..+.+.++|+++|+|++|+||+|+++++. ++|+|+++++||++|+++++++||++++++|+++.+..
T Consensus 228 ~~---------~~~~l~~ia~~~g~s~aqvaL~w~l~~~~--~~I~g~~~~~~l~en~~~~~~~L~~e~~~~l~~~~~~~ 296 (316)
T 1us0_A 228 LL---------EDPRIKAIAAKHNKTTAQVLIRFPMQRNL--VVIPKSVTPERIAENFKVFDFELSSQDMTTLLSYNRNW 296 (316)
T ss_dssp TT---------TCHHHHHHHHHHTCCHHHHHHHHHHHTTC--EECCBCCCHHHHHHHHCCSSCCCCHHHHHHHHTTCCCC
T ss_pred cc---------cCHHHHHHHHHhCCCHHHHHHHHHHHCCC--EEEeCCCCHHHHHHHhhhcCCCCCHHHHHHHHhhccCC
Confidence 10 01488999999999999999999999983 99999999999999999999999999999999998765
Q ss_pred CCCC
Q 025789 225 EVGG 228 (248)
Q Consensus 225 ~~~~ 228 (248)
+...
T Consensus 297 ~~~~ 300 (316)
T 1us0_A 297 RVCA 300 (316)
T ss_dssp CSCC
T ss_pred cccc
Confidence 5543
No 28
>3o0k_A Aldo/keto reductase; ssgcid, ALS collaborative crystallography; 1.80A {Brucella melitensis biovar}
Probab=100.00 E-value=1.9e-43 Score=300.69 Aligned_cols=179 Identities=27% Similarity=0.382 Sum_probs=163.1
Q ss_pred CCCCCHHHHHHHHHHHHhHcCCCcccEEEeccCCCC-CCHHHHHHHHHHHHHcCcccEEeccCCcHHHHHHHhcc--CCc
Q 025789 8 GVKGSPEYVRKCCEASLKRLDVDYIDLYYQHRVDTS-VSIEDTMGELKKLVEEGKIKYIGLSEASADTIRRAHAV--HPI 84 (248)
Q Consensus 8 ~~~~s~~~i~~~~e~SL~rL~~d~iDl~~lH~~~~~-~~~~~~~~~l~~l~~~G~ir~iGvS~~~~~~l~~~~~~--~~~ 84 (248)
..+.+++.+++++++||+||||||||+|+||||+.. .+.+++|++|++++++||||+||||||++++++++++. .++
T Consensus 101 ~~~~~~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~p 180 (283)
T 3o0k_A 101 NSDQGYESTLKAFDTSLKKLGTDYVDLYLIHWPMPSKDLFMETWRAFIKLKEEGRVKSIGVSNFRTADLERLIKESGVTP 180 (283)
T ss_dssp GGGCSHHHHHHHHHHHHHHHTSSCEEEEEECCSCSCHHHHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHHSCCC
T ss_pred CCCCCHHHHHHHHHHHHHHhCCCceeEEEECCCCCCcccHHHHHHHHHHHHHCCCcceEEeccCcHHHHHHHHHhCCCCe
Confidence 345789999999999999999999999999999876 46789999999999999999999999999999998765 456
Q ss_pred ceeccccCCccccchhchHHHHHHcCCcEEeeccccccccccccccCCCCchhhhhcCCCCCchhhHHHHHHHHHHHHHH
Q 025789 85 TAVQMEYSLWTREIEDDIIPLCRELGIGIVAYSPLGRGFFAGKAVVESLPSESILAMHPRFSGENLEKNKLLYTRLETLA 164 (248)
Q Consensus 85 ~~~q~~~~~~~~~~~~~~~~~~~~~gi~v~~~~~l~~G~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ia 164 (248)
+++|++||++++. .+++++|+++||++++|+||++|.+... +.+.++|
T Consensus 181 ~~~Q~~~~~~~~~--~~l~~~~~~~gi~v~a~spL~~G~l~~~------------------------------~~l~~ia 228 (283)
T 3o0k_A 181 VLNQIELHPQFQQ--DELRLFHGKHDIATEAWSPLGQGKLLED------------------------------PTLKSIA 228 (283)
T ss_dssp SEEEEECBTTBCC--HHHHHHHHHTTCEEEEESTTCCC-CTTC------------------------------HHHHHHH
T ss_pred EEEEeecCcccCc--HHHHHHHHHCCcEEEEecCCCCCccccc------------------------------hHHHHHH
Confidence 8999999999874 6799999999999999999999965321 3899999
Q ss_pred HHhCCCHHHHHHHHHHhCCCCceeecCCCChHhHHHhhcccCCCCCHHHHHHHHhh
Q 025789 165 AKYGCTTPQLALAWLLHQGDDIVPIPGTTKITNLDNNIGSLALKLKEEDLKEICKT 220 (248)
Q Consensus 165 ~~~~~s~~q~al~~~l~~~~v~~~i~G~~~~~~l~enl~a~~~~Lt~~~~~~l~~~ 220 (248)
+++|+|++|+||+|+++++. ++|+|+++++|+++|+++++++||++|+++|+++
T Consensus 229 ~~~g~t~aqvaL~w~l~~~~--v~I~g~~~~~~l~en~~a~~~~Ls~ee~~~i~~l 282 (283)
T 3o0k_A 229 EKHAKSVAQIILRWHIETGN--IVIPKSITPARIKENFDIFDFTLNGTDHDAITKL 282 (283)
T ss_dssp HHHTSCHHHHHHHHHHHHTC--EECCCCCSHHHHHHHHCCSSCCCCHHHHHHHHTT
T ss_pred HHhCCCHHHHHHHHHHHCCC--EEEeCCCCHHHHHHHHHhCCCCCCHHHHHHHhcc
Confidence 99999999999999999998 5899999999999999999999999999999876
No 29
>1zgd_A Chalcone reductase; polyketide, deoxychalcone, isoflavonoid, biosynthesis, plant protein; HET: NAP; 1.70A {Medicago sativa}
Probab=100.00 E-value=3.6e-43 Score=303.27 Aligned_cols=196 Identities=23% Similarity=0.366 Sum_probs=171.9
Q ss_pred CCCCCHHHHHHHHHHHHhHcCCCcccEEEeccCCC----------------CCCHHHHHHHHHHHHHcCcccEEeccCCc
Q 025789 8 GVKGSPEYVRKCCEASLKRLDVDYIDLYYQHRVDT----------------SVSIEDTMGELKKLVEEGKIKYIGLSEAS 71 (248)
Q Consensus 8 ~~~~s~~~i~~~~e~SL~rL~~d~iDl~~lH~~~~----------------~~~~~~~~~~l~~l~~~G~ir~iGvS~~~ 71 (248)
..+++++.+++++++||+||||||||+|+||||+. ..+.+++|++|++++++||||+||||||+
T Consensus 90 ~~~~~~~~v~~~~~~SL~rL~~dyiDl~llH~p~~~~~~~~~~~~~~~~~~~~~~~e~~~ale~l~~~Gkir~iGvSn~~ 169 (312)
T 1zgd_A 90 VTENHPHLVIPALQKSLKTLQLDYLDLYLIHWPLSSQPGKFSFPIDVADLLPFDVKGVWESMEESLKLGLTKAIGVSNFS 169 (312)
T ss_dssp GGGCSGGGHHHHHHHHHHHHTCSCBSEEEECCSCEECTTCCCSSEEGGGEECCCHHHHHHHHHHHHHTTSBSCEEEESCC
T ss_pred CCCCCHHHHHHHHHHHHHHhCCCceeEEEEeccCcccCccccccccccccccccHHHHHHHHHHHHHcCCCCEEEEeCCC
Confidence 34678999999999999999999999999999963 24688999999999999999999999999
Q ss_pred HHHHHHHhcc--CCcceeccccCCccccchhchHHHHHHcCCcEEeeccccccccccccccCCCCchhhhhcCCCCCchh
Q 025789 72 ADTIRRAHAV--HPITAVQMEYSLWTREIEDDIIPLCRELGIGIVAYSPLGRGFFAGKAVVESLPSESILAMHPRFSGEN 149 (248)
Q Consensus 72 ~~~l~~~~~~--~~~~~~q~~~~~~~~~~~~~~~~~~~~~gi~v~~~~~l~~G~l~g~~~~~~~~~~~~~~~~~~~~~~~ 149 (248)
+++++++++. .+++++|++||++++. .+++++|+++||++++|+||++|.+.+.. +.+.
T Consensus 170 ~~~l~~~~~~~~~~p~~~Q~~~~~~~~~--~~l~~~~~~~gi~v~a~spl~~G~~~~~~--------------~~~~--- 230 (312)
T 1zgd_A 170 VKKLENLLSVATVLPAVNQVEMNLAWQQ--KKLREFCNAHGIVLTAFSPVRKGASRGPN--------------EVME--- 230 (312)
T ss_dssp HHHHHHHHTTCSSCCSEEEEECBTTBCC--HHHHHHHHHTTCEEEEESTTTTTTTTSSC--------------TTTT---
T ss_pred HHHHHHHHHhCCCCceEEeeecCcccCC--HHHHHHHHHcCCEEEEecCCCCCCCCCCc--------------cccc---
Confidence 9999999876 4789999999999874 67999999999999999999988643210 0010
Q ss_pred hHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHhCCCCceeecCCCChHhHHHhhcccCCCCCHHHHHHHHhhcCCCCCCCC
Q 025789 150 LEKNKLLYTRLETLAAKYGCTTPQLALAWLLHQGDDIVPIPGTTKITNLDNNIGSLALKLKEEDLKEICKTIPVDEVGGH 229 (248)
Q Consensus 150 ~~~~~~~~~~l~~ia~~~~~s~~q~al~~~l~~~~v~~~i~G~~~~~~l~enl~a~~~~Lt~~~~~~l~~~~~~~~~~~~ 229 (248)
.+.+.++|+++|+|++|+||+|+++++. ++|+|+++++||++|+++++++||++++++|+++....+..+.
T Consensus 231 -------~~~l~~ia~~~g~s~aqvaL~w~l~~~~--~~I~g~~~~~~l~en~~~~~~~L~~e~~~~l~~~~~~~~~~~~ 301 (312)
T 1zgd_A 231 -------NDMLKEIADAHGKSVAQISLRWLYEQGV--TFVPKSYDKERMNQNLRIFDWSLTKEDHEKIAQIKQNRLIPGP 301 (312)
T ss_dssp -------CHHHHHHHHHHTSCHHHHHHHHHHHTTC--EECCCCCSHHHHHHTTCCSSCCCCHHHHHHHTTSCCCCSCCCS
T ss_pred -------cHHHHHHHHHcCCCHHHHHHHHHHHCCC--EEEeCCCCHHHHHHHHHhccCCCCHHHHHHHHHHhccCccCCC
Confidence 1488999999999999999999999974 8999999999999999999999999999999999887666665
Q ss_pred CC
Q 025789 230 RD 231 (248)
Q Consensus 230 ~~ 231 (248)
+|
T Consensus 302 ~~ 303 (312)
T 1zgd_A 302 TK 303 (312)
T ss_dssp EE
T ss_pred CC
Confidence 54
No 30
>1hw6_A 2,5-diketo-D-gluconic acid reductase; aldo-keto reductase, TIM barrel, oxidoreductase; 1.90A {Corynebacterium SP} SCOP: c.1.7.1 PDB: 1a80_A* 1m9h_A*
Probab=100.00 E-value=3.6e-43 Score=298.51 Aligned_cols=184 Identities=22% Similarity=0.303 Sum_probs=161.0
Q ss_pred CCCCCHHHHHHHHHHHHhHcCCCcccEEEeccCCC-CCCHHHHHHHHHHHHHcCcccEEeccCCcHHHHHHHhcc--CCc
Q 025789 8 GVKGSPEYVRKCCEASLKRLDVDYIDLYYQHRVDT-SVSIEDTMGELKKLVEEGKIKYIGLSEASADTIRRAHAV--HPI 84 (248)
Q Consensus 8 ~~~~s~~~i~~~~e~SL~rL~~d~iDl~~lH~~~~-~~~~~~~~~~l~~l~~~G~ir~iGvS~~~~~~l~~~~~~--~~~ 84 (248)
..+++++.+++++++||+||||||||+|+||||+. ..+.+++|++|++++++||||+||||||++++++++++. .++
T Consensus 78 ~~~~~~~~v~~~~~~SL~rLg~dyiDl~llH~p~~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~p 157 (278)
T 1hw6_A 78 NDRHDGDEPAAAIAESLAKLALDQVDLYLVHWPTPAADNYVHAWEKMIELRAAGLTRSIGVSNHLVPHLERIVAATGVVP 157 (278)
T ss_dssp CC-----CHHHHHHHHHHHHTCSCEEEEEECCCCTTCSSHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHHSCCC
T ss_pred CCCCCHHHHHHHHHHHHHHhCCCCEEEEEEcCCCCCCCCHHHHHHHHHHHHHcCCccEEEecCCCHHHHHHHHHhcCCCc
Confidence 34678999999999999999999999999999987 467899999999999999999999999999999998775 456
Q ss_pred ceeccccCCccccchhchHHHHHHcCCcEEeeccccccccccccccCCCCchhhhhcCCCCCchhhHHHHHHHHHHHHHH
Q 025789 85 TAVQMEYSLWTREIEDDIIPLCRELGIGIVAYSPLGRGFFAGKAVVESLPSESILAMHPRFSGENLEKNKLLYTRLETLA 164 (248)
Q Consensus 85 ~~~q~~~~~~~~~~~~~~~~~~~~~gi~v~~~~~l~~G~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ia 164 (248)
+++|++||++++. .+++++|+++||++++|+||++|. ++ .+.. +.+.++|
T Consensus 158 ~~~Q~~~~~~~~~--~~l~~~~~~~gi~v~a~spl~~G~--~~----------------~~~~----------~~l~~ia 207 (278)
T 1hw6_A 158 AVNQIELHPAYQQ--REITDWAAAHDVKIESWGPLGQGK--YD----------------LFGA----------EPVTAAA 207 (278)
T ss_dssp SEEEEECBTTBCC--HHHHHHHHHTTCEEEEESTTGGGS--SC----------------CTTS----------HHHHHHH
T ss_pred eeEEEEeCcccCC--HHHHHHHHHcCCEEEEeccccCCC--cc----------------cccc----------HHHHHHH
Confidence 9999999999985 679999999999999999999984 11 0000 2789999
Q ss_pred HHhCCCHHHHHHHHHHhCCCCceeecCCCChHhHHHhhcccCCCCCHHHHHHHHhhcCC
Q 025789 165 AKYGCTTPQLALAWLLHQGDDIVPIPGTTKITNLDNNIGSLALKLKEEDLKEICKTIPV 223 (248)
Q Consensus 165 ~~~~~s~~q~al~~~l~~~~v~~~i~G~~~~~~l~enl~a~~~~Lt~~~~~~l~~~~~~ 223 (248)
+++|+|++|+||+|+++++ + ++|+|+++++||++|+++++++||++++++|+++...
T Consensus 208 ~~~g~s~aqvaL~w~l~~~-v-~~I~g~~~~~~l~en~~~~~~~L~~~~~~~l~~~~~~ 264 (278)
T 1hw6_A 208 AAHGKTPAQAVLRWHLQKG-F-VVFPKSVRRERLEENLDVFDFDLTDTEIAAIDAMDPG 264 (278)
T ss_dssp HHHTCCHHHHHHHHHHHTT-C-BBCCCCCSHHHHHHHHCCSSCCCCHHHHHHHHTTCC-
T ss_pred HHhCCCHHHHHHHHHHHCC-C-EEEcCCCCHHHHHHHHhhcCCCCCHHHHHHHHHhhcc
Confidence 9999999999999999996 4 8999999999999999999999999999999999765
No 31
>2wzm_A Aldo-keto reductase; oxidoreductase; HET: NA7; 1.64A {Mycobacterium smegmatis} PDB: 2wzt_A
Probab=100.00 E-value=5.6e-43 Score=297.91 Aligned_cols=183 Identities=22% Similarity=0.344 Sum_probs=166.0
Q ss_pred CCCCHHHHHHHHHHHHhHcCCCcccEEEeccCCCC-CCHHHHHHHHHHHHHcCcccEEeccCCcHHHHHHHhcc--CCcc
Q 025789 9 VKGSPEYVRKCCEASLKRLDVDYIDLYYQHRVDTS-VSIEDTMGELKKLVEEGKIKYIGLSEASADTIRRAHAV--HPIT 85 (248)
Q Consensus 9 ~~~s~~~i~~~~e~SL~rL~~d~iDl~~lH~~~~~-~~~~~~~~~l~~l~~~G~ir~iGvS~~~~~~l~~~~~~--~~~~ 85 (248)
.+++++.+++++++||+||||||||+|+||||+.. .+..++|++|++|+++||||+||||||++++++++++. .+++
T Consensus 87 ~~~~~~~v~~~~~~SL~rL~~dyiDl~llH~p~~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~p~ 166 (283)
T 2wzm_A 87 PDQGFTSSQAAARASLERLGLDYVDLYLIHWPGGDTSKYVDSWGGLMKVKEDGIARSIGVCNFGAEDLETIVSLTYFTPA 166 (283)
T ss_dssp GGCSHHHHHHHHHHHHHHHTCSCEEEEEECCCTTCHHHHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHHCCCCS
T ss_pred CCCCHHHHHHHHHHHHHHhCCCCEeEEEEcCCCCCCCCHHHHHHHHHHHHHcCCccEEEEcCCCHHHHHHHHHhcCCCcc
Confidence 46789999999999999999999999999999874 45789999999999999999999999999999998775 4569
Q ss_pred eeccccCCccccchhchHHHHHHcCCcEEeeccccccccccccccCCCCchhhhhcCCCCCchhhHHHHHHHHHHHHHHH
Q 025789 86 AVQMEYSLWTREIEDDIIPLCRELGIGIVAYSPLGRGFFAGKAVVESLPSESILAMHPRFSGENLEKNKLLYTRLETLAA 165 (248)
Q Consensus 86 ~~q~~~~~~~~~~~~~~~~~~~~~gi~v~~~~~l~~G~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ia~ 165 (248)
++|++||++++. .+++++|+++||++++|+||++|.+... +.+.++|+
T Consensus 167 ~~Q~~~~~~~~~--~~l~~~~~~~gi~v~a~spl~~G~l~~~------------------------------~~l~~ia~ 214 (283)
T 2wzm_A 167 VNQIELHPLLNQ--AALREVNAGYNIVTEAYGPLGVGRLLDH------------------------------PAVTAIAE 214 (283)
T ss_dssp EEEEECBTTBCC--HHHHHHHHHTTCEEEEECTTTTTGGGGC------------------------------HHHHHHHH
T ss_pred cccccCCcccCC--HHHHHHHHHCCCEEEEecCCCCCcccch------------------------------HHHHHHHH
Confidence 999999999985 5799999999999999999999843210 27899999
Q ss_pred HhCCCHHHHHHHHHHhCCCCceeecCCCChHhHHHhhcccCCCCCHHHHHHHHhhcCCCC
Q 025789 166 KYGCTTPQLALAWLLHQGDDIVPIPGTTKITNLDNNIGSLALKLKEEDLKEICKTIPVDE 225 (248)
Q Consensus 166 ~~~~s~~q~al~~~l~~~~v~~~i~G~~~~~~l~enl~a~~~~Lt~~~~~~l~~~~~~~~ 225 (248)
++|+|++|+||+|+++++. ++|+|+++++||++|+++++++||++++++|+++.+..+
T Consensus 215 ~~g~s~aqvaL~w~l~~~~--~~I~g~~~~~~l~en~~~~~~~L~~~~~~~l~~~~~~~~ 272 (283)
T 2wzm_A 215 AHGRTAAQVLLRWSIQLGN--VVISRSANPERIASNLDVFGFELTADEMETLNGLDDGTR 272 (283)
T ss_dssp HHTCCHHHHHHHHHHHTTC--EEEECCSSHHHHHHHHCCSSCCCCHHHHHHHHTCCCCCC
T ss_pred HhCCCHHHHHHHHHHHCCC--EEEeCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHhhcCC
Confidence 9999999999999999974 899999999999999999999999999999999987643
No 32
>1s1p_A Aldo-keto reductase family 1 member C3; TIM-barrel, oxidoreductase; HET: NAP; 1.20A {Homo sapiens} SCOP: c.1.7.1 PDB: 1s1r_A* 1s2a_A* 1s2c_A* 3uwe_A* 3r58_A* 3r43_A* 3r7m_A* 3r6i_A* 3r8h_A* 3r94_A* 3r8g_A* 1zq5_A* 1ry8_A* 1xf0_A* 1ry0_A* 2f38_A* 2fgb_A* 4dbs_A* 4dbu_A* 3gug_A* ...
Probab=100.00 E-value=1.6e-42 Score=301.53 Aligned_cols=196 Identities=26% Similarity=0.292 Sum_probs=169.7
Q ss_pred CCCCHHHHHHHHHHHHhHcCCCcccEEEeccCCC-------------------CCCHHHHHHHHHHHHHcCcccEEeccC
Q 025789 9 VKGSPEYVRKCCEASLKRLDVDYIDLYYQHRVDT-------------------SVSIEDTMGELKKLVEEGKIKYIGLSE 69 (248)
Q Consensus 9 ~~~s~~~i~~~~e~SL~rL~~d~iDl~~lH~~~~-------------------~~~~~~~~~~l~~l~~~G~ir~iGvS~ 69 (248)
.+.+++.+++++++||+||||||||+|+||||+. ..+.+++|++|++|+++||||+|||||
T Consensus 88 ~~~~~~~v~~~~e~SL~rLg~dyiDl~llH~p~~~~~~~~~~~~d~~g~~~~~~~~~~e~~~ale~l~~~Gkir~iGvSn 167 (331)
T 1s1p_A 88 TFHRPELVRPALENSLKKAQLDYVDLYLIHSPMSLKPGEELSPTDENGKVIFDIVDLCTTWEAMEKCKDAGLAKSIGVSN 167 (331)
T ss_dssp GGCSHHHHHHHHHHHHHHHTCSCEEEEEECCSCCBCCSSCSSCBCTTSCBCBCCCCHHHHHHHHHHHHHTTSEEEEEEES
T ss_pred ccCCHHHHHHHHHHHHHHhCCCcEEEEEeccCcccCCCcccCCccccccccccccCHHHHHHHHHHHHHcCCccEEEEeC
Confidence 4678999999999999999999999999999942 236789999999999999999999999
Q ss_pred CcHHHHHHHhccC----CcceeccccCCccccchhchHHHHHHcCCcEEeeccccccccccccccCCCCchhhhhcCCCC
Q 025789 70 ASADTIRRAHAVH----PITAVQMEYSLWTREIEDDIIPLCRELGIGIVAYSPLGRGFFAGKAVVESLPSESILAMHPRF 145 (248)
Q Consensus 70 ~~~~~l~~~~~~~----~~~~~q~~~~~~~~~~~~~~~~~~~~~gi~v~~~~~l~~G~l~g~~~~~~~~~~~~~~~~~~~ 145 (248)
|++++++++++.. +++++|++||++.+. .+++++|+++||++++|+||++|.|++-..+. . |.+
T Consensus 168 ~~~~~l~~~~~~~~~~~~p~v~Q~~~~~~~~~--~~l~~~~~~~gI~v~a~spL~~G~l~~~~~~~---~-------~~~ 235 (331)
T 1s1p_A 168 FNRRQLEMILNKPGLKYKPVCNQVECHPYFNR--SKLLDFCKSKDIVLVAYSALGSQRDKRWVDPN---S-------PVL 235 (331)
T ss_dssp CCHHHHHHHHTCTTCCCCCSEEEEECBTTBCC--HHHHHHHHHTTCEEEEESTTSCCCCTTTSCTT---S-------CCG
T ss_pred CCHHHHHHHHHhcCccCCCceeeeecCCCcCh--HHHHHHHHHcCCEEEEeccccCCcccccccCC---C-------ccc
Confidence 9999999998863 669999999999874 67999999999999999999999887521000 0 100
Q ss_pred CchhhHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHhCCCCceeecCCCChHhHHHhhcccCCCCCHHHHHHHHhhcCCCC
Q 025789 146 SGENLEKNKLLYTRLETLAAKYGCTTPQLALAWLLHQGDDIVPIPGTTKITNLDNNIGSLALKLKEEDLKEICKTIPVDE 225 (248)
Q Consensus 146 ~~~~~~~~~~~~~~l~~ia~~~~~s~~q~al~~~l~~~~v~~~i~G~~~~~~l~enl~a~~~~Lt~~~~~~l~~~~~~~~ 225 (248)
+ ..+.+.++|+++|+|++|+||+|+++++. ++|+|+++++||++|+++++++||++++++|+++.+..+
T Consensus 236 ----~-----~~~~l~~ia~~~g~s~aqvaL~w~l~~~~--~vI~g~~~~~~l~en~~~~~~~L~~e~~~~l~~~~~~~~ 304 (331)
T 1s1p_A 236 ----L-----EDPVLCALAKKHKRTPALIALRYQLQRGV--VVLAKSYNEQRIRQNVQVFEFQLTAEDMKAIDGLDRNLH 304 (331)
T ss_dssp ----G-----GCHHHHHHHHHHTSCHHHHHHHHHHHTTC--EEEEECCSHHHHHHHGGGGGCCCCHHHHHHHHTTCCCCC
T ss_pred ----c-----cCHHHHHHHHHhCCCHHHHHHHHHHhCCC--EEeeCCCCHHHHHHHhhhcCCCcCHHHHHHHHHHhcCCc
Confidence 0 01488999999999999999999999984 899999999999999999999999999999999987655
Q ss_pred CC
Q 025789 226 VG 227 (248)
Q Consensus 226 ~~ 227 (248)
.+
T Consensus 305 ~~ 306 (331)
T 1s1p_A 305 YF 306 (331)
T ss_dssp SC
T ss_pred cc
Confidence 43
No 33
>1vp5_A 2,5-diketo-D-gluconic acid reductase; TM1009, structural genomics, joint center for structural genomics, PSI, protein structure initiative; HET: NAP; 2.40A {Thermotoga maritima} SCOP: c.1.7.1
Probab=100.00 E-value=1.5e-42 Score=297.02 Aligned_cols=182 Identities=26% Similarity=0.413 Sum_probs=164.5
Q ss_pred CCCCHHHHHHHHHHHHhHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCcccEEeccCCcHHHHHHHhcc--CCcce
Q 025789 9 VKGSPEYVRKCCEASLKRLDVDYIDLYYQHRVDTSVSIEDTMGELKKLVEEGKIKYIGLSEASADTIRRAHAV--HPITA 86 (248)
Q Consensus 9 ~~~s~~~i~~~~e~SL~rL~~d~iDl~~lH~~~~~~~~~~~~~~l~~l~~~G~ir~iGvS~~~~~~l~~~~~~--~~~~~ 86 (248)
.+++++.+++++++||+||||||||+|+||||+. +.+++|++|++++++||||+||||||++++++++++. .++++
T Consensus 95 ~~~~~~~v~~~~~~SL~rLg~dyiDl~llH~p~~--~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~p~v 172 (298)
T 1vp5_A 95 SDVGYESTKKAFEKSLKKLQLEYIDLYLIHQPFG--DVHCAWKAMEEMYKDGLVRAIGVSNFYPDRLMDLMVHHEIVPAV 172 (298)
T ss_dssp GGCSSHHHHHHHHHHHHHHTCSCEEEEEECSSCS--CHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHCSSCCSE
T ss_pred CCCCHHHHHHHHHHHHHHHCCCcEEEEEecCCCC--CHHHHHHHHHHHHHcCCccEEEecCCCHHHHHHHHHhCCCCceE
Confidence 4678999999999999999999999999999987 7899999999999999999999999999999998875 45699
Q ss_pred eccccCCccccchhchHHHHHHcCCcEEeeccccccccccccccCCCCchhhhhcCCCCCchhhHHHHHHHHHHHHHHHH
Q 025789 87 VQMEYSLWTREIEDDIIPLCRELGIGIVAYSPLGRGFFAGKAVVESLPSESILAMHPRFSGENLEKNKLLYTRLETLAAK 166 (248)
Q Consensus 87 ~q~~~~~~~~~~~~~~~~~~~~~gi~v~~~~~l~~G~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ia~~ 166 (248)
+|++||++++. .+++++|+++||++++|+||++|. ++. +.. +.+.++|++
T Consensus 173 ~Q~~~~~~~~~--~~l~~~~~~~gI~v~a~spL~~G~--~~~----------------l~~----------~~l~~ia~~ 222 (298)
T 1vp5_A 173 NQIEIHPFYQR--QEEIEFMRNYNIQPEAWGPFAEGR--KNI----------------FQN----------GVLRSIAEK 222 (298)
T ss_dssp EEEECBTTBCC--HHHHHHHHHTTCEEEEESTTGGGG--GGG----------------GGC----------HHHHHHHHH
T ss_pred EEEecccccCC--HHHHHHHHHCCCEEEEecccccCC--ccc----------------cCc----------HHHHHHHHH
Confidence 99999999985 579999999999999999999984 110 000 378999999
Q ss_pred hCCCHHHHHHHHHHhCCCCceeecCCCChHhHHHhhcccCCCCCHHHHHHHHhhcCCC
Q 025789 167 YGCTTPQLALAWLLHQGDDIVPIPGTTKITNLDNNIGSLALKLKEEDLKEICKTIPVD 224 (248)
Q Consensus 167 ~~~s~~q~al~~~l~~~~v~~~i~G~~~~~~l~enl~a~~~~Lt~~~~~~l~~~~~~~ 224 (248)
+|+|++|+||+|+++++. ++|+|+++++||++|+++++++||++++++|+++....
T Consensus 223 ~g~s~aqvaL~w~l~~~v--~vI~g~~~~~~l~enl~a~~~~Ls~e~~~~l~~~~~~~ 278 (298)
T 1vp5_A 223 YGKTVAQVILRWLTQKGI--VAIPKTVRRERMKENISIFDFELTQEDMEKIATLDEGQ 278 (298)
T ss_dssp HTCCHHHHHHHHHHHTTC--EECCCCSCHHHHHHHHCCSSCCCCHHHHHHHHTTCCSS
T ss_pred hCCCHHHHHHHHHHhCCC--EEEeCCCCHHHHHHHHhhcCCCCCHHHHHHHHHhhccc
Confidence 999999999999999974 89999999999999999999999999999999998753
No 34
>3h7u_A Aldo-keto reductase; stress response, NADP, drought tolerance, oxidoreductase; HET: NAP; 1.25A {Arabidopsis thaliana}
Probab=100.00 E-value=1.8e-42 Score=301.41 Aligned_cols=199 Identities=24% Similarity=0.362 Sum_probs=170.5
Q ss_pred CCCCCHHHHHHHHHHHHhHcCCCcccEEEeccCCC--------------CCCHHHHHHHHHHHHHcCcccEEeccCCcHH
Q 025789 8 GVKGSPEYVRKCCEASLKRLDVDYIDLYYQHRVDT--------------SVSIEDTMGELKKLVEEGKIKYIGLSEASAD 73 (248)
Q Consensus 8 ~~~~s~~~i~~~~e~SL~rL~~d~iDl~~lH~~~~--------------~~~~~~~~~~l~~l~~~G~ir~iGvS~~~~~ 73 (248)
..+++++.+++++++||+||||||||+|+||||+. ..+.+++|++|++|+++||||+||||||+++
T Consensus 104 ~~~~~~~~v~~~~e~SL~rLg~dyiDl~llH~p~~~~~~~~~~~~~~~~~~~~~e~~~aL~~l~~~Gkir~iGvSn~~~~ 183 (335)
T 3h7u_A 104 CTDHDPQDVPEALNRTLKDLQLEYVDLYLIHWPARIKKGSVGIKPENLLPVDIPSTWKAMEALYDSGKARAIGVSNFSTK 183 (335)
T ss_dssp GGGCSTTHHHHHHHHHHHHHTCSCBSEEEECSSCEECSSCSSCCGGGEECCCHHHHHHHHHHHHHTTSBSSEEEESCCHH
T ss_pred CCCCCHHHHHHHHHHHHHHcCCCceeEEEEcCCCccccccccccccccccCCHHHHHHHHHHHHHcCCccEEEecCCCHH
Confidence 45678999999999999999999999999999964 2468999999999999999999999999999
Q ss_pred HHHHHhcc--CCcceeccccCCccccchhchHHHHHHcCCcEEeeccccccccccccccCCCCchhhhhcCCCCCchhhH
Q 025789 74 TIRRAHAV--HPITAVQMEYSLWTREIEDDIIPLCRELGIGIVAYSPLGRGFFAGKAVVESLPSESILAMHPRFSGENLE 151 (248)
Q Consensus 74 ~l~~~~~~--~~~~~~q~~~~~~~~~~~~~~~~~~~~~gi~v~~~~~l~~G~l~g~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (248)
+++++++. .+++++|++||++.+. .+++++|+++||++++|+||++|... .. .....
T Consensus 184 ~l~~~~~~~~~~~~~~Q~~~~~~~~~--~~l~~~~~~~gI~v~a~sPL~~g~~~--~~-----~~~~~------------ 242 (335)
T 3h7u_A 184 KLADLLELARVPPAVNQVECHPSWRQ--TKLQEFCKSKGVHLSAYSPLGSPGTT--WL-----KSDVL------------ 242 (335)
T ss_dssp HHHHHHHHCSSCCSEEEEECBTTBCC--HHHHHHHHHHTCEEEEESTTCCTTCT--TS-----CCCGG------------
T ss_pred HHHHHHHhCCCCeEEEecccccccCC--HHHHHHHHHCCCEEEEeccCcCCCCC--CC-----Ccccc------------
Confidence 99998765 5679999999999885 68999999999999999999976311 00 00000
Q ss_pred HHHHHHHHHHHHHHHhCCCHHHHHHHHHHhCCCCceeecCCCChHhHHHhhcccCCCCCHHHHHHHHhhcCCCCCCCCCC
Q 025789 152 KNKLLYTRLETLAAKYGCTTPQLALAWLLHQGDDIVPIPGTTKITNLDNNIGSLALKLKEEDLKEICKTIPVDEVGGHRD 231 (248)
Q Consensus 152 ~~~~~~~~l~~ia~~~~~s~~q~al~~~l~~~~v~~~i~G~~~~~~l~enl~a~~~~Lt~~~~~~l~~~~~~~~~~~~~~ 231 (248)
..+.+.++|+++|+|++|+||+|+++++. ++|+|+++++||++|+++++++||++++++|+++.+.....+..|
T Consensus 243 ----~~~~l~~iA~~~g~t~aqvaL~w~l~~~~--~vI~g~~~~~~l~enl~a~~~~L~~e~~~~i~~l~~~~~~~~~~~ 316 (335)
T 3h7u_A 243 ----KNPILNMVAEKLGKSPAQVALRWGLQMGH--SVLPKSTNEGRIKENFNVFDWSIPDYMFAKFAEIEQARLVTGSFL 316 (335)
T ss_dssp ----GCHHHHHHHHHHTCCHHHHHHHHHHHTTC--EECCBCSCHHHHHHHHCCSSCCCCHHHHHHGGGSCCCCSCCCGGG
T ss_pred ----ccHHHHHHHHHHCcCHHHHHHHHHHHCCC--EEEeCCCCHHHHHHHHhhCCCCcCHHHHHHHHhHhhcCcccccee
Confidence 01489999999999999999999999984 999999999999999999999999999999999987655544444
Q ss_pred Cc
Q 025789 232 YS 233 (248)
Q Consensus 232 ~~ 233 (248)
.+
T Consensus 317 ~~ 318 (335)
T 3h7u_A 317 VH 318 (335)
T ss_dssp BC
T ss_pred cc
Confidence 43
No 35
>3h7r_A Aldo-keto reductase; stress response, NADP, drought tolerance, oxidoreductase; HET: NAP; 1.40A {Arabidopsis thaliana}
Probab=100.00 E-value=1.4e-42 Score=301.55 Aligned_cols=200 Identities=25% Similarity=0.335 Sum_probs=172.2
Q ss_pred CCCCCHHHHHHHHHHHHhHcCCCcccEEEeccCCC--------------CCCHHHHHHHHHHHHHcCcccEEeccCCcHH
Q 025789 8 GVKGSPEYVRKCCEASLKRLDVDYIDLYYQHRVDT--------------SVSIEDTMGELKKLVEEGKIKYIGLSEASAD 73 (248)
Q Consensus 8 ~~~~s~~~i~~~~e~SL~rL~~d~iDl~~lH~~~~--------------~~~~~~~~~~l~~l~~~G~ir~iGvS~~~~~ 73 (248)
..+++++.+++++++||+||||||||+|+||||+. ..+.+++|++|++|+++||||+||||||+++
T Consensus 100 ~~~~~~~~i~~~~e~SL~rLg~dyiDl~llH~p~~~~~~~~~~~~~~~~~~~~~e~~~aL~~l~~~Gkir~iGvSn~~~~ 179 (331)
T 3h7r_A 100 SNDHLPEDVPKALEKTLQDLQIDYVDLYLIHWPASLKKESLMPTPEMLTKPDITSTWKAMEALYDSGKARAIGVSNFSSK 179 (331)
T ss_dssp GGGCSTTHHHHHHHHHHHHHTCSCBSEEEECCSCEECTTCSSCCGGGEECCCHHHHHHHHHHHHHTTSBSSEEEESCCHH
T ss_pred CCCCCHHHHHHHHHHHHHHcCCCeeEEEEEecCcccccccccccccccccCCHHHHHHHHHHHHHcCCCcEEEecCCCHH
Confidence 45678999999999999999999999999999964 3568999999999999999999999999999
Q ss_pred HHHHHhcc--CCcceeccccCCccccchhchHHHHHHcCCcEEeeccccccccccccccCCCCchhhhhcCCCCCchhhH
Q 025789 74 TIRRAHAV--HPITAVQMEYSLWTREIEDDIIPLCRELGIGIVAYSPLGRGFFAGKAVVESLPSESILAMHPRFSGENLE 151 (248)
Q Consensus 74 ~l~~~~~~--~~~~~~q~~~~~~~~~~~~~~~~~~~~~gi~v~~~~~l~~G~l~g~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (248)
+++++++. .+++++|++||++.+. .+++++|+++||++++|+||++|... .....
T Consensus 180 ~l~~~~~~~~~~~~~~Q~~~~~~~~~--~~l~~~~~~~gI~v~a~spL~~g~~~-------~~~~~-------------- 236 (331)
T 3h7r_A 180 KLTDLLNVARVTPAVNQVECHPVWQQ--QGLHELCKSKGVHLSGYSPLGSQSKG-------EVRLK-------------- 236 (331)
T ss_dssp HHHHHHHHCSSCCSEEEEECBTTBCC--HHHHHHHHHHTCEEEEESTTSCSCTT-------TTTHH--------------
T ss_pred HHHHHHHhcCCCceeEEeecccccCC--HHHHHHHHHCCCEEEEeCCCCCCCCC-------CCccc--------------
Confidence 99998765 4689999999999884 68999999999999999999976210 00000
Q ss_pred HHHHHHHHHHHHHHHhCCCHHHHHHHHHHhCCCCceeecCCCChHhHHHhhcccCCCCCHHHHHHHHhhcCCCCCCCCCC
Q 025789 152 KNKLLYTRLETLAAKYGCTTPQLALAWLLHQGDDIVPIPGTTKITNLDNNIGSLALKLKEEDLKEICKTIPVDEVGGHRD 231 (248)
Q Consensus 152 ~~~~~~~~l~~ia~~~~~s~~q~al~~~l~~~~v~~~i~G~~~~~~l~enl~a~~~~Lt~~~~~~l~~~~~~~~~~~~~~ 231 (248)
....+.+.++|+++|+|++|+||+|+++++. ++|+|+++++||++|+++++++||++++++|+++.+.....+..|
T Consensus 237 --~~~~~~l~~iA~~~g~t~aqvaL~w~l~~~~--~vI~g~~~~~~l~en~~a~~~~L~~ee~~~l~~l~~~~~~~~~~~ 312 (331)
T 3h7r_A 237 --VLQNPIVTEVAEKLGKTTAQVALRWGLQTGH--SVLPKSSSGARLKENLDVFDWSIPEDLFTKFSNIPQEKFCRATEF 312 (331)
T ss_dssp --HHTCHHHHHHHHHHTCCHHHHHHHHHHHTTC--EECCCCSCHHHHHHHTCCSSCCCCHHHHGGGGGSCCCCSCCCGGG
T ss_pred --hhcCHHHHHHHHHHCcCHHHHHHHHHHHCCC--EEEeCCCCHHHHHHHHhhCCCCcCHHHHHHHHHhhhcCcccCccc
Confidence 0112589999999999999999999999984 899999999999999999999999999999999988765555455
Q ss_pred Ccc
Q 025789 232 YSN 234 (248)
Q Consensus 232 ~~~ 234 (248)
++.
T Consensus 313 ~~~ 315 (331)
T 3h7r_A 313 AHE 315 (331)
T ss_dssp CCT
T ss_pred ccC
Confidence 543
No 36
>1mi3_A Xylose reductase, XR; aldo-keto reductase, beta-alpha barrel, dimer, oxidoreductase; HET: NAD; 1.80A {Candida tenuis} SCOP: c.1.7.1 PDB: 1jez_A* 1k8c_A* 1ye6_A* 1ye4_A* 1sm9_A* 1r38_A* 1z9a_A*
Probab=100.00 E-value=5.1e-42 Score=297.31 Aligned_cols=197 Identities=27% Similarity=0.348 Sum_probs=166.5
Q ss_pred CCCCHHHHHHHHHHHHhHcCCCcccEEEeccCCC-------------------------CCCHHHHHHHHHHHHHcCccc
Q 025789 9 VKGSPEYVRKCCEASLKRLDVDYIDLYYQHRVDT-------------------------SVSIEDTMGELKKLVEEGKIK 63 (248)
Q Consensus 9 ~~~s~~~i~~~~e~SL~rL~~d~iDl~~lH~~~~-------------------------~~~~~~~~~~l~~l~~~G~ir 63 (248)
.+++++.+++++++||+||||||||+|+||||+. ..+.+++|++|++|+++||||
T Consensus 85 ~~~~~~~v~~~~~~SL~rL~~dyiDl~llH~p~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~e~~~al~~l~~~Gkir 164 (322)
T 1mi3_A 85 NYHDPKNVETALNKTLADLKVDYVDLFLIHFPIAFKFVPIEEKYPPGFYCGDGNNFVYEDVPILETWKALEKLVAAGKIK 164 (322)
T ss_dssp GGCSHHHHHHHHHHHHHHHTCSCEEEEEECCSCCBCCCCTTTCSSCTTCCSSTTCCCBCCCCHHHHHHHHHHHHHTTSEE
T ss_pred CCCCHHHHHHHHHHHHHHhCCCCeeeEEEecCcccccCcccccccccccccccccccccCCCHHHHHHHHHHHHHcCCcC
Confidence 4678999999999999999999999999999942 236789999999999999999
Q ss_pred EEeccCCcHHHHHHHhcc--CCcceeccccCCccccchhchHHHHHHcCCcEEeeccccccccccccccCCCCchhhhhc
Q 025789 64 YIGLSEASADTIRRAHAV--HPITAVQMEYSLWTREIEDDIIPLCRELGIGIVAYSPLGRGFFAGKAVVESLPSESILAM 141 (248)
Q Consensus 64 ~iGvS~~~~~~l~~~~~~--~~~~~~q~~~~~~~~~~~~~~~~~~~~~gi~v~~~~~l~~G~l~g~~~~~~~~~~~~~~~ 141 (248)
+||||||++++++++++. .+++++|++||++.+. .+++++|+++||++++|+||++|.+... +... ...
T Consensus 165 ~iGvSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~--~~l~~~~~~~gi~v~a~spL~~G~~~~~------~~~~-~~~ 235 (322)
T 1mi3_A 165 SIGVSNFPGALLLDLLRGATIKPAVLQVEHHPYLQQ--PKLIEFAQKAGVTITAYSSFGPQSFVEM------NQGR-ALN 235 (322)
T ss_dssp EEEEESCCHHHHHHHHHHCSSCCCEEEEECBTTBCC--HHHHHHHHHTTCEEEEECTTTTHHHHTT------TCHH-HHT
T ss_pred EEEEcCCCHHHHHHHHHhCCCCceEeecccCcCcCc--HHHHHHHHHcCCEEEEECCCCCCCcccc------cccc-ccc
Confidence 999999999999998875 4689999999999874 6799999999999999999999833211 0000 000
Q ss_pred CCCCCchhhHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHhCCCCceeecCCCChHhHHHhhcccCCCCCHHHHHHHHhhc
Q 025789 142 HPRFSGENLEKNKLLYTRLETLAAKYGCTTPQLALAWLLHQGDDIVPIPGTTKITNLDNNIGSLALKLKEEDLKEICKTI 221 (248)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~l~~ia~~~~~s~~q~al~~~l~~~~v~~~i~G~~~~~~l~enl~a~~~~Lt~~~~~~l~~~~ 221 (248)
.|.+.. .+.+.++|+++|+|++|+||+|+++++. ++|+|+++++||++|+++++++||++++++|+++.
T Consensus 236 ~~~~~~---------~~~l~~iA~~~g~t~aqvaL~w~l~~~~--~vI~g~~~~~~l~en~~~~~~~L~~e~~~~l~~~~ 304 (322)
T 1mi3_A 236 TPTLFA---------HDTIKAIAAKYNKTPAEVLLRWAAQRGI--AVIPKSNLPERLVQNRSFNTFDLTKEDFEEIAKLD 304 (322)
T ss_dssp SCCTTS---------CHHHHHHHHHHTCCHHHHHHHHHHTTTC--EECCCCCSHHHHHHTTSCCSSCCCHHHHHHHHTTC
T ss_pred Cccccc---------CHHHHHHHHHcCCCHHHHHHHHHHhCCC--EEEcCCCCHHHHHHHHhhcCCCcCHHHHHHHHhhc
Confidence 111110 1478999999999999999999999983 99999999999999999999999999999999997
Q ss_pred CCCC
Q 025789 222 PVDE 225 (248)
Q Consensus 222 ~~~~ 225 (248)
+..+
T Consensus 305 ~~~~ 308 (322)
T 1mi3_A 305 IGLR 308 (322)
T ss_dssp CCCC
T ss_pred ccCc
Confidence 6544
No 37
>1mzr_A 2,5-diketo-D-gluconate reductase A; alpha/beta-barrel, aldo-ketoreductase, NADPH dependant, BACT targets at IGS-CNRS, france, BIGS; 2.13A {Escherichia coli} SCOP: c.1.7.1
Probab=100.00 E-value=4.6e-42 Score=293.74 Aligned_cols=180 Identities=26% Similarity=0.354 Sum_probs=162.4
Q ss_pred HHHHHHHHHHHhHcCCCcccEEEeccCCC-CCCHHHHHHHHHHHHHcCcccEEeccCCcHHHHHHHhcc--CCcceeccc
Q 025789 14 EYVRKCCEASLKRLDVDYIDLYYQHRVDT-SVSIEDTMGELKKLVEEGKIKYIGLSEASADTIRRAHAV--HPITAVQME 90 (248)
Q Consensus 14 ~~i~~~~e~SL~rL~~d~iDl~~lH~~~~-~~~~~~~~~~l~~l~~~G~ir~iGvS~~~~~~l~~~~~~--~~~~~~q~~ 90 (248)
+.+++++++||+||||||||+|+||||+. ..+.+++|++|++++++||||+||||||++++++++++. .+++++|++
T Consensus 104 ~~v~~~~e~SL~rLg~dyiDl~llH~p~~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~p~v~Q~~ 183 (296)
T 1mzr_A 104 KRPREALLDSLKKLQLDYIDLYLMHWPVPAIDHYVEAWKGMIELQKEGLIKSIGVCNFQIHHLQRLIDETGVTPVINQIE 183 (296)
T ss_dssp TCHHHHHHHHHHHHTCSCEEEEEESCCCTTTCCHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHHSCCCSEEEEE
T ss_pred HHHHHHHHHHHHHhCCCcEEEEEEccCCCCcCCHHHHHHHHHHHHHCCCcCEEEEeCCCHHHHHHHHHhcCCCceEEeee
Confidence 78999999999999999999999999987 478899999999999999999999999999999998764 567899999
Q ss_pred cCCccccchhchHHHHHHcCCcEEeeccccccccccccccCCCCchhhhhcCCCCCchhhHHHHHHHHHHHHHHHHhCCC
Q 025789 91 YSLWTREIEDDIIPLCRELGIGIVAYSPLGRGFFAGKAVVESLPSESILAMHPRFSGENLEKNKLLYTRLETLAAKYGCT 170 (248)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~gi~v~~~~~l~~G~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ia~~~~~s 170 (248)
||++++. .+++++|+++||++++|+||++|.+. .+.. +.+.++|+++|+|
T Consensus 184 ~~~~~~~--~~l~~~~~~~gI~v~a~spL~~G~~~------------------~l~~----------~~l~~ia~~~g~s 233 (296)
T 1mzr_A 184 LHPLMQQ--RQLHAWNATHKIQTESWSPLAQGGKG------------------VFDQ----------KVIRDLADKYGKT 233 (296)
T ss_dssp CBTTBCC--HHHHHHHHHTTCEEEEESTTTTTCTT------------------TTTS----------HHHHHHHHHHTCC
T ss_pred cccccCC--HHHHHHHHHCCCeEEEeccccCCcch------------------hcCh----------HHHHHHHHHhCCC
Confidence 9999885 67999999999999999999998431 0000 3788999999999
Q ss_pred HHHHHHHHHHhCCCCceeecCCCChHhHHHhhcccCCCCCHHHHHHHHhhcCCCC
Q 025789 171 TPQLALAWLLHQGDDIVPIPGTTKITNLDNNIGSLALKLKEEDLKEICKTIPVDE 225 (248)
Q Consensus 171 ~~q~al~~~l~~~~v~~~i~G~~~~~~l~enl~a~~~~Lt~~~~~~l~~~~~~~~ 225 (248)
++|+||+|+++++. ++|+|+++++||++|+++++++||++++++|+++.+..+
T Consensus 234 ~aqvaL~w~l~~~v--~vI~g~~~~~~l~enl~a~~~~Ls~e~~~~l~~~~~~~~ 286 (296)
T 1mzr_A 234 PAQIVIRWHLDSGL--VVIPKSVTPSRIAENFDVWDFRLDKDELGEIAKLDQGKR 286 (296)
T ss_dssp HHHHHHHHHHHTTC--EECCBCCCHHHHHHTTCCSSCCCCHHHHHHHHTTCCCCC
T ss_pred HHHHHHHHHHhCCC--EEEeCCCCHHHHHHHHhhcCCCCCHHHHHHHHHhhhcCC
Confidence 99999999999974 899999999999999999999999999999999987643
No 38
>3krb_A Aldose reductase; ssgcid, SBRI, emerald biostructures, university of washingto niaid, oxidoreductase, S genomics; HET: NAP; 1.75A {Giardia lamblia}
Probab=100.00 E-value=1.8e-42 Score=301.39 Aligned_cols=195 Identities=26% Similarity=0.431 Sum_probs=165.3
Q ss_pred CCCCCHHHHHHHHHHHHhHcCCCcccEEEeccCCC--------------C-------CCHHHHHHHHHHHHHcCcccEEe
Q 025789 8 GVKGSPEYVRKCCEASLKRLDVDYIDLYYQHRVDT--------------S-------VSIEDTMGELKKLVEEGKIKYIG 66 (248)
Q Consensus 8 ~~~~s~~~i~~~~e~SL~rL~~d~iDl~~lH~~~~--------------~-------~~~~~~~~~l~~l~~~G~ir~iG 66 (248)
..+++++.+++++++||+||||||||+|+||||+. + .+.+++|++|++|+++||||+||
T Consensus 95 ~~~~~~~~v~~~~e~SL~rLg~dyiDl~llH~p~~~~~~~~~~~~~~d~~g~~~~~~~~~~e~~~al~~l~~~Gkir~iG 174 (334)
T 3krb_A 95 NYNHRPELVREQCKKTMSDLQVDYLDLFLVHWPLAFVRNDVGDLFPKDAEGRAMLEKVPLADTWRAMEQLVEEGLVKHIG 174 (334)
T ss_dssp GGGCSGGGHHHHHHHHHHHHTCSCEEEEEECCSCCBCCCTTCCSSCBCTTSCBCBCCCCHHHHHHHHHHHHHHTSEEEEE
T ss_pred CCCCCHHHHHHHHHHHHHHcCCCceeEEEEccccccccccccccCcccccccccccCCCHHHHHHHHHHHHHcCCccEEE
Confidence 34678999999999999999999999999999943 1 56899999999999999999999
Q ss_pred ccCCcHHHHHHHhccC--CcceeccccCCccccchhchHHHHHHcCCcEEeeccccccccccccccCCCCchhhhhcCCC
Q 025789 67 LSEASADTIRRAHAVH--PITAVQMEYSLWTREIEDDIIPLCRELGIGIVAYSPLGRGFFAGKAVVESLPSESILAMHPR 144 (248)
Q Consensus 67 vS~~~~~~l~~~~~~~--~~~~~q~~~~~~~~~~~~~~~~~~~~~gi~v~~~~~l~~G~l~g~~~~~~~~~~~~~~~~~~ 144 (248)
||||++++++++++.. +++++|++||++++. .+++++|+++||++++|+||++|+|+++........
T Consensus 175 vSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~--~~l~~~c~~~gI~v~ayspL~~G~L~~~~~~~~~~~--------- 243 (334)
T 3krb_A 175 VSNYTVPLLADLLNYAKIKPLVNQIEIHPWHPN--DATVKFCLDNGIGVTAYSPMGGSYADPRDPSGTQKN--------- 243 (334)
T ss_dssp EESCCHHHHHHHHHHCSSCCSEEEEECBTTBCC--HHHHHHHHHTTCEEEEESTTCCSBC-------CCBC---------
T ss_pred EecCCHHHHHHHHHhCCCceEEeeeecCccccc--HHHHHHHHHcCCEEEEEecCCCCcccCCCCCCCccc---------
Confidence 9999999999988764 789999999999874 789999999999999999999999997642211000
Q ss_pred CCchhhHHHHHHHHHHHHHHHHhCCCHHHHHH-----HHHHhCCCCceeecCCCChHhHHHhhcccCCCCCHHHHHHHHh
Q 025789 145 FSGENLEKNKLLYTRLETLAAKYGCTTPQLAL-----AWLLHQGDDIVPIPGTTKITNLDNNIGSLALKLKEEDLKEICK 219 (248)
Q Consensus 145 ~~~~~~~~~~~~~~~l~~ia~~~~~s~~q~al-----~~~l~~~~v~~~i~G~~~~~~l~enl~a~~~~Lt~~~~~~l~~ 219 (248)
.. ...+.+.++|+++|+|++|+|| +|+++ + .++|+|+++++||++|+++++++||++++++|++
T Consensus 244 ---~~-----~~~~~l~~iA~~~g~s~aqvaLaw~~~~w~l~-~--~~vI~gs~~~~~l~en~~a~~~~Ls~ee~~~l~~ 312 (334)
T 3krb_A 244 ---VI-----LECKTLKAIADAKGTSPHCVALAWHVKKWNTS-M--YSVIPKSQTPARIEANFKCTEVQLSDDDMDAINN 312 (334)
T ss_dssp ---GG-----GGCHHHHHHHHHHTSCHHHHHHHHHHHHSCST-T--EEECCBCSSHHHHHHHGGGGGCCCCHHHHHHHHH
T ss_pred ---ch-----hccHHHHHHHHHhCcCHHHhHHhhHhhhhhcC-C--eEEeeCCCCHHHHHHHHhhcCCCCCHHHHHHHHH
Confidence 00 0124899999999999999999 77777 3 6999999999999999999999999999999999
Q ss_pred hcCCC
Q 025789 220 TIPVD 224 (248)
Q Consensus 220 ~~~~~ 224 (248)
+.+..
T Consensus 313 l~~~~ 317 (334)
T 3krb_A 313 IHLNK 317 (334)
T ss_dssp HHHHC
T ss_pred hhcCC
Confidence 97654
No 39
>2bgs_A Aldose reductase; holoenzyme, aldo/keto reductase, oxidoreductase; HET: NDP; 1.64A {Hordeum vulgare} PDB: 2bgq_A* 2vdg_A*
Probab=100.00 E-value=1.1e-41 Score=296.97 Aligned_cols=187 Identities=32% Similarity=0.478 Sum_probs=166.0
Q ss_pred CCCCHHHHHHHHHHHHhHcCCCcccEEEeccCCC---------------CCCHHHHHHHHHHHHHcCcccEEeccCCcHH
Q 025789 9 VKGSPEYVRKCCEASLKRLDVDYIDLYYQHRVDT---------------SVSIEDTMGELKKLVEEGKIKYIGLSEASAD 73 (248)
Q Consensus 9 ~~~s~~~i~~~~e~SL~rL~~d~iDl~~lH~~~~---------------~~~~~~~~~~l~~l~~~G~ir~iGvS~~~~~ 73 (248)
.+.+++.+++++++||+||||||||+|+||||+. ..+.+++|++|++|+++||||+||||||+++
T Consensus 116 ~~~~~~~v~~ale~SL~rLg~dyIDl~llH~p~~~~~~~~~~~~~~~~~~~~~~e~~~aLe~l~~~GkIr~iGvSn~~~~ 195 (344)
T 2bgs_A 116 TNLAPERVRPALENTLKDLQLDYIDLYHIHWPFRLKDGAHMPPEAGEVLEFDMEGVWKEMENLVKDGLVKDIGVCNYTVT 195 (344)
T ss_dssp GGCSHHHHHHHHHHHHHHHTCSCEEEEEESSSCEECTTCCSSCCTTCEECCCHHHHHHHHHHHHHTTSEEEEEEESCCHH
T ss_pred CCCCHHHHHHHHHHHHHHhCCCcEEEEEEecCCccccccccccccccccCCCHHHHHHHHHHHHHcCCccEEEEecCCHH
Confidence 4678999999999999999999999999999963 2368899999999999999999999999999
Q ss_pred HHHHHhcc--CCcceeccccCCccccchhchHHHHHHcCCcEEeeccccccccccccccCCCCchhhhhcCCCCCchhhH
Q 025789 74 TIRRAHAV--HPITAVQMEYSLWTREIEDDIIPLCRELGIGIVAYSPLGRGFFAGKAVVESLPSESILAMHPRFSGENLE 151 (248)
Q Consensus 74 ~l~~~~~~--~~~~~~q~~~~~~~~~~~~~~~~~~~~~gi~v~~~~~l~~G~l~g~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (248)
+++++++. .+++++|++||++.+. .+++++|+++||++++|+||++| +. . .+.
T Consensus 196 ~l~~~~~~~~i~p~v~Q~e~~~~~~~--~~ll~~~~~~gI~v~a~spL~~G---~~---~------------~~~----- 250 (344)
T 2bgs_A 196 KLNRLLRSAKIPPAVCQMEMHPGWKN--DKIFEACKKHGIHITAYSPLGSS---EK---N------------LAH----- 250 (344)
T ss_dssp HHHHHHHHCSSCCSEEEEECBTTBCC--HHHHHHHHHTTCEEEEESTTCTT---TT---C------------CTT-----
T ss_pred HHHHHHHhcCCCceeeecccCcccCc--HHHHHHHHHCCCEEEEeCcccCC---Cc---h------------hhc-----
Confidence 99998775 4679999999999874 67999999999999999999987 10 0 000
Q ss_pred HHHHHHHHHHHHHHHhCCCHHHHHHHHHHhCCCCceeecCCCChHhHHHhhcccCCCCCHHHHHHHHhhcCCCCCC
Q 025789 152 KNKLLYTRLETLAAKYGCTTPQLALAWLLHQGDDIVPIPGTTKITNLDNNIGSLALKLKEEDLKEICKTIPVDEVG 227 (248)
Q Consensus 152 ~~~~~~~~l~~ia~~~~~s~~q~al~~~l~~~~v~~~i~G~~~~~~l~enl~a~~~~Lt~~~~~~l~~~~~~~~~~ 227 (248)
.+.+.++|+++|+|++|+||+|+++++. ++|+|+++++||++|+++++++||++++++|+++.+..+.+
T Consensus 251 -----~~~l~~iA~~~g~s~aqvaL~w~l~~~~--~vI~gs~~~~~l~eNl~a~~~~Ls~ee~~~l~~l~~~~~~~ 319 (344)
T 2bgs_A 251 -----DPVVEKVANKLNKTPGQVLIKWALQRGT--SVIPKSSKDERIKENIQVFGWEIPEEDFKVLCSIKDEKRVL 319 (344)
T ss_dssp -----CHHHHHHHHHHTCCHHHHHHHHHHHHTC--EECCBCSSHHHHHHTTCCSSCCCCHHHHHHHHHSCTTCCSC
T ss_pred -----cHHHHHHHHHhCCCHHHHHHHHHHhCCC--eEEECCCCHHHHHHHHHhcCCCCCHHHHHHHHHHhhcCCcc
Confidence 0378999999999999999999999984 89999999999999999999999999999999998765543
No 40
>4exb_A Putative uncharacterized protein; aldo-keto reductase, NADP+ binding, oxidoreducta; 2.75A {Pseudomonas aeruginosa} PDB: 4exa_A
Probab=100.00 E-value=1.2e-41 Score=290.96 Aligned_cols=166 Identities=25% Similarity=0.238 Sum_probs=145.6
Q ss_pred CCCCCCCCHHHHHHHHHHHHhHcCCCcccEEEeccC--CCCCCHH-HHHHHHHHHHHcCcccEEeccCCcHHHHHHHhcc
Q 025789 5 VSIGVKGSPEYVRKCCEASLKRLDVDYIDLYYQHRV--DTSVSIE-DTMGELKKLVEEGKIKYIGLSEASADTIRRAHAV 81 (248)
Q Consensus 5 ~~~~~~~s~~~i~~~~e~SL~rL~~d~iDl~~lH~~--~~~~~~~-~~~~~l~~l~~~G~ir~iGvS~~~~~~l~~~~~~ 81 (248)
+....+++++.+++++++||+||||||||+|+|||| +...+.+ ++|++|++++++||||+||||||++++++++++.
T Consensus 124 ~~~~~~~~~~~i~~~~e~SL~rLg~dyiDl~llH~p~~d~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~ 203 (292)
T 4exb_A 124 GQSVFDFSAAHTRRSVERSLKRLETDRIELVLVHSDGNDLDILENSEVYPTLAALKREGLIGAYGLSGKTVEGGLRALRE 203 (292)
T ss_dssp CSCCBCCCHHHHHHHHHHHHHHTTSSCEEEEEEECCSCHHHHHHHSSHHHHHHHHHHTTSEEEEEEECSSHHHHHHHHHH
T ss_pred CCccCCCCHHHHHHHHHHHHHHhCCCceeEEEEecCCCCccccchHHHHHHHHHHHHCCCceEEEeCCCCHHHHHHHHHh
Confidence 344568899999999999999999999999999999 4444455 8999999999999999999999999999999887
Q ss_pred CCcceeccccCCccccchhchHHHHHHcCCcEEeeccccccccccccccCCCCchhhhhcCCCCCchhhHHHHHHHHHHH
Q 025789 82 HPITAVQMEYSLWTREIEDDIIPLCRELGIGIVAYSPLGRGFFAGKAVVESLPSESILAMHPRFSGENLEKNKLLYTRLE 161 (248)
Q Consensus 82 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~gi~v~~~~~l~~G~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 161 (248)
++++|++||++++.. .+++++|+++||++++|+||++|+|++
T Consensus 204 --~~~~Q~~~~~~~~~~-~~l~~~~~~~gi~v~a~spL~~G~L~~----------------------------------- 245 (292)
T 4exb_A 204 --GDCAMVTYNLNERAE-RPVIEYAAAHAKGILVKKALASGHACL----------------------------------- 245 (292)
T ss_dssp --SSEEEEECSSSCCTT-HHHHHHHHHTTCEEEEECCSCC----------------------------------------
T ss_pred --hcEEeeccccccCCH-HHHHHHHHHCCcEEEEeccccCCccCC-----------------------------------
Confidence 899999999999875 689999999999999999999997641
Q ss_pred HHHHHhCCCHHHHHHHHHHhCCCCceeecCCCChHhHHHhhcccCCCCCHH
Q 025789 162 TLAAKYGCTTPQLALAWLLHQGDDIVPIPGTTKITNLDNNIGSLALKLKEE 212 (248)
Q Consensus 162 ~ia~~~~~s~~q~al~~~l~~~~v~~~i~G~~~~~~l~enl~a~~~~Lt~~ 212 (248)
++|+|++|+||+|++++|.|+++|+|+++++||++|++++++.||++
T Consensus 246 ----~~g~t~aqvaL~w~l~~~~v~~vI~g~~~~~~l~en~~a~~~~Ls~~ 292 (292)
T 4exb_A 246 ----GAGQDPVRASFELVFDQPGVAAAIVGTINPLHLAHNVAMAAQALKKA 292 (292)
T ss_dssp -------CCHHHHHHHHHHHSTTCCEEEECCCCHHHHHHHHHHHHHHHC--
T ss_pred ----CCCCCHHHHHHHHHHhCCCCeEEEeCCCCHHHHHHHHHHhhccCCCC
Confidence 27899999999999999999999999999999999999999988875
No 41
>3cf4_A Acetyl-COA decarboxylase/synthase alpha subunit; methanomicrobia, iron-nikel-sulfur, 4Fe-NI-4S, oxidoreductas; 2.00A {Methanosarcina barkeri}
Probab=98.55 E-value=1.8e-08 Score=96.07 Aligned_cols=132 Identities=12% Similarity=0.031 Sum_probs=96.3
Q ss_pred HHHHHhHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCcccEE--eccCCcH---H----------------HHHHH
Q 025789 20 CEASLKRLDVDYIDLYYQHRVDTSVSIEDTMGELKKLVEEGKIKYI--GLSEASA---D----------------TIRRA 78 (248)
Q Consensus 20 ~e~SL~rL~~d~iDl~~lH~~~~~~~~~~~~~~l~~l~~~G~ir~i--GvS~~~~---~----------------~l~~~ 78 (248)
++.||.+|++||+|| ++|..+... .+++++++++++.+|+|+++ |+|++.. . ...++
T Consensus 231 ~e~sL~~L~~d~vdI-~I~Ghn~~~-~~~iLeaa~~a~~~g~I~~iG~c~T~he~lr~~~~~~~~~~~pv~G~~~~~~~~ 308 (807)
T 3cf4_A 231 VEIGMGTIDKSKPFL-CVIGHNVAG-VTYMMDYMEDNNLTDKMEIAGLCCTAIDLTRYKEADRRPPYAKVIGSMSKELKV 308 (807)
T ss_dssp EEESGGGSCTTSCEE-EEESSCCHH-HHHHHHHHHHTTCTTTSEEEEESHHHHHHTTTTCTTCCCCCSEEEESGGGHHHH
T ss_pred eeccccccCCCCceE-EEECCcCcc-HHHHHHHHHHCCCCCCCcEEeeccCCCchhhccccccccccccccccHHHHHHH
Confidence 567899999999999 577544332 46889999999999999999 5555544 1 23344
Q ss_pred hccCCcceeccccCCccccchhchHHHHHHcCCcEEeeccccc-cccccccccCCCCchhhhhcCCCCCchhhHHHHHHH
Q 025789 79 HAVHPITAVQMEYSLWTREIEDDIIPLCRELGIGIVAYSPLGR-GFFAGKAVVESLPSESILAMHPRFSGENLEKNKLLY 157 (248)
Q Consensus 79 ~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~gi~v~~~~~l~~-G~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (248)
+..+.++++++.|+-.++ .+++.|.++|++|++.+|.++ |.+..
T Consensus 309 i~tGa~dv~vV~~n~i~~----~ll~~a~~~Gm~Vit~sp~~~~Grpd~------------------------------- 353 (807)
T 3cf4_A 309 IRSGMPDVIVVDEQCVRG----DIVPEAQKLKIPVIASNPKIMYGLPNR------------------------------- 353 (807)
T ss_dssp HHHTCCSEEEECSSSCCT----THHHHHHHTTCCEEECSTTCCTTCCBC-------------------------------
T ss_pred hhcCCCeEEEEEecCCCh----HHHHHHHHCCCEEEEechhhhcCCCcc-------------------------------
Confidence 557889999999997653 578999999999999999986 43210
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHhCCCCceeecCCCChHhH
Q 025789 158 TRLETLAAKYGCTTPQLALAWLLHQGDDIVPIPGTTKITNL 198 (248)
Q Consensus 158 ~~l~~ia~~~~~s~~q~al~~~l~~~~v~~~i~G~~~~~~l 198 (248)
.+. +.+.+++|+++++...++.+|+.+..++
T Consensus 354 ---------~d~-~~~~~le~LLs~~~~~~l~~g~~~~~el 384 (807)
T 3cf4_A 354 ---------TDA-DVDETMEELKSGKIPGCVMLDYDKLGEL 384 (807)
T ss_dssp ---------TTS-CHHHHHHHHHTTSSSEEECCCHHHHHHH
T ss_pred ---------ccc-hHHHHHHHHHhCCCCCceeeCCccHHHH
Confidence 011 2567888888887544566776666664
No 42
>2akz_A Gamma enolase, neural; fluoride inhibition, negative cooperativity, glycolysis, , isothermal titration calorimetry, lyase; 1.36A {Homo sapiens} SCOP: c.1.11.1 d.54.1.1 PDB: 2akm_A 1te6_A 2psn_A 3b97_A 2xsx_A 1pdz_A 1pdy_A
Probab=89.86 E-value=3.7 Score=36.20 Aligned_cols=96 Identities=10% Similarity=0.066 Sum_probs=69.3
Q ss_pred CCHHHHHHHHHHHHhHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCcccEEeccC--CcHHHHHHHhccCCcceec
Q 025789 11 GSPEYVRKCCEASLKRLDVDYIDLYYQHRVDTSVSIEDTMGELKKLVEEGKIKYIGLSE--ASADTIRRAHAVHPITAVQ 88 (248)
Q Consensus 11 ~s~~~i~~~~e~SL~rL~~d~iDl~~lH~~~~~~~~~~~~~~l~~l~~~G~ir~iGvS~--~~~~~l~~~~~~~~~~~~q 88 (248)
++++...+.+.+.++.. ++++|-.|-... -|+.+.++.++.+|.-.|=-. .++..+.++++..-.+++|
T Consensus 270 ~t~~e~~~~~~~ll~~y-----~i~~IEdPl~~d----D~~g~~~L~~~~~ipI~gDE~~vt~~~~~~~~i~~~a~d~i~ 340 (439)
T 2akz_A 270 ITGDQLGALYQDFVRDY-----PVVSIEDPFDQD----DWAAWSKFTANVGIQIVGDDLTVTNPKRIERAVEEKACNCLL 340 (439)
T ss_dssp BCHHHHHHHHHHHHHHS-----CEEEEECCSCTT----CHHHHHHHHHTCSSEEEESTTTTTCHHHHHHHHHTTCCSEEE
T ss_pred CCHHHHHHHHHHHHHhC-----CCcEEECCCCcc----cHHHHHHHHhCCCCEEEeCCCccCCHHHHHHHHHhCCCCEEE
Confidence 46777666667767654 588888885443 377788888888877666543 4799999999988888998
Q ss_pred cccCCccccc-hhchHHHHHHcCCcEEe
Q 025789 89 MEYSLWTREI-EDDIIPLCRELGIGIVA 115 (248)
Q Consensus 89 ~~~~~~~~~~-~~~~~~~~~~~gi~v~~ 115 (248)
+..+-.-.-- ..++..+|+++|+.++.
T Consensus 341 iKv~qiGGitea~~ia~lA~~~g~~~~~ 368 (439)
T 2akz_A 341 LKVNQIGSVTEAIQACKLAQENGWGVMV 368 (439)
T ss_dssp ECHHHHCCHHHHHHHHHHHHHTTCEEEE
T ss_pred echhhcCCHHHHHHHHHHHHHCCCeEEe
Confidence 8665432211 25788999999999755
No 43
>2al1_A Enolase 1, 2-phospho-D-; beta barrel, lyase; HET: PEP 2PG; 1.50A {Saccharomyces cerevisiae} SCOP: c.1.11.1 d.54.1.1 PDB: 1ebg_A 1ebh_A* 1one_A* 2one_A* 1p48_A* 1p43_A* 1l8p_A 4enl_A 1nel_A 1els_A 3enl_A 5enl_A* 6enl_A 7enl_A* 2al2_A* 2al2_B* 2xh7_A* 2xgz_A* 2xh2_A* 2xh4_A* ...
Probab=89.39 E-value=4 Score=35.99 Aligned_cols=96 Identities=8% Similarity=-0.004 Sum_probs=67.6
Q ss_pred CCHHHHHHHHHHHHhHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCcccEEeccC--CcHHHHHHHhccCCcceec
Q 025789 11 GSPEYVRKCCEASLKRLDVDYIDLYYQHRVDTSVSIEDTMGELKKLVEEGKIKYIGLSE--ASADTIRRAHAVHPITAVQ 88 (248)
Q Consensus 11 ~s~~~i~~~~e~SL~rL~~d~iDl~~lH~~~~~~~~~~~~~~l~~l~~~G~ir~iGvS~--~~~~~l~~~~~~~~~~~~q 88 (248)
++++...+.+.+.++.. ++++|-.|-... -|+.+.++.++.+|--.|=-. .++..+.++++..-.+++|
T Consensus 273 ~t~~eai~~~~~~l~~y-----~i~~iEdPl~~d----D~~g~~~l~~~~~ipI~gDE~~vt~~~~~~~~i~~~a~d~i~ 343 (436)
T 2al1_A 273 LTGPQLADLYHSLMKRY-----PIVSIEDPFAED----DWEAWSHFFKTAGIQIVADDLTVTNPKRIATAIEKKAADALL 343 (436)
T ss_dssp BCHHHHHHHHHHHHHHS-----CEEEEECCSCTT----CHHHHHHHHTTCCSEEEESTTTTTCHHHHHHHHHTTCCSEEE
T ss_pred CCHHHHHHHHHHHHHhC-----CcEEEECCCCCc----CHHHHHHHHhcCCCeEEECCcccCCHHHHHHHHHhCCCCEEE
Confidence 36676666666666654 578888875443 466777788777776665544 3689999999988888888
Q ss_pred cccCCcccc-chhchHHHHHHcCCcEEe
Q 025789 89 MEYSLWTRE-IEDDIIPLCRELGIGIVA 115 (248)
Q Consensus 89 ~~~~~~~~~-~~~~~~~~~~~~gi~v~~ 115 (248)
+..|-.-.- ...++..+|+.+|+.++.
T Consensus 344 ikv~qiGGitea~~ia~lA~~~g~~~~~ 371 (436)
T 2al1_A 344 LKVNQIGTLSESIKAAQDSFAAGWGVMV 371 (436)
T ss_dssp ECHHHHCCHHHHHHHHHHHHHTTCEEEE
T ss_pred echhhcCCHHHHHHHHHHHHHcCCeEEE
Confidence 866542211 125788999999998755
No 44
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=88.74 E-value=1.8 Score=36.19 Aligned_cols=100 Identities=13% Similarity=0.103 Sum_probs=61.5
Q ss_pred CHHHHHHHHHHHHhHcCCCcccEEEec-cCC-CCCCHHH----HHHHHHHHHHc-CcccEEeccCCcHHHHHHHhccCCc
Q 025789 12 SPEYVRKCCEASLKRLDVDYIDLYYQH-RVD-TSVSIED----TMGELKKLVEE-GKIKYIGLSEASADTIRRAHAVHPI 84 (248)
Q Consensus 12 s~~~i~~~~e~SL~rL~~d~iDl~~lH-~~~-~~~~~~~----~~~~l~~l~~~-G~ir~iGvS~~~~~~l~~~~~~~~~ 84 (248)
+.+.+.+..++.+ +-|-|.||+---- +|. .....+| ++..++.+++. +. -|.+-++.++.++++++.+..
T Consensus 61 ~~~~a~~~a~~~v-~~GAdiIDIGgeStrPga~~v~~~eE~~RvvpvI~~l~~~~~v--piSIDT~~~~V~~aAl~aGa~ 137 (297)
T 1tx2_A 61 EVDAAVRHAKEMR-DEGAHIIDIGGESTRPGFAKVSVEEEIKRVVPMIQAVSKEVKL--PISIDTYKAEVAKQAIEAGAH 137 (297)
T ss_dssp HHHHHHHHHHHHH-HTTCSEEEEESCC----CCCCCHHHHHHHHHHHHHHHHHHSCS--CEEEECSCHHHHHHHHHHTCC
T ss_pred CHHHHHHHHHHHH-HcCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhcCCc--eEEEeCCCHHHHHHHHHcCCC
Confidence 4455555555444 6788888887533 233 2233333 34445666654 33 478889999999999887543
Q ss_pred ceeccccCCccccchhchHHHHHHcCCcEEeecc
Q 025789 85 TAVQMEYSLWTREIEDDIIPLCRELGIGIVAYSP 118 (248)
Q Consensus 85 ~~~q~~~~~~~~~~~~~~~~~~~~~gi~v~~~~~ 118 (248)
-+ +.-|.... ..++++.++++|..++.+..
T Consensus 138 iI--Ndvsg~~~--d~~m~~~aa~~g~~vVlmh~ 167 (297)
T 1tx2_A 138 II--NDIWGAKA--EPKIAEVAAHYDVPIILMHN 167 (297)
T ss_dssp EE--EETTTTSS--CTHHHHHHHHHTCCEEEECC
T ss_pred EE--EECCCCCC--CHHHHHHHHHhCCcEEEEeC
Confidence 22 23333322 25789999999999998754
No 45
>3qtp_A Enolase 1; glycolysis, lyase; HET: 2PG; 1.90A {Entamoeba histolytica}
Probab=86.87 E-value=9.8 Score=33.52 Aligned_cols=96 Identities=13% Similarity=0.060 Sum_probs=66.5
Q ss_pred CCHHHHHHHHHHHHhHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHc-CcccEEec--cCCcHHHHHHHhccCCccee
Q 025789 11 GSPEYVRKCCEASLKRLDVDYIDLYYQHRVDTSVSIEDTMGELKKLVEE-GKIKYIGL--SEASADTIRRAHAVHPITAV 87 (248)
Q Consensus 11 ~s~~~i~~~~e~SL~rL~~d~iDl~~lH~~~~~~~~~~~~~~l~~l~~~-G~ir~iGv--S~~~~~~l~~~~~~~~~~~~ 87 (248)
.+++.+.+-..+-++.. ++++|-.|-...+ |+.+.++.+. |+|.-+|= ...++..++++++....+++
T Consensus 279 ~t~~elid~y~~lle~y-----pI~~IEDPl~~dD----~eg~a~Lt~~lg~i~IvGDEl~vTn~~~i~~~Ie~~a~n~I 349 (441)
T 3qtp_A 279 KDVDGLIAEYVDYGKHY-----PIASIEDPFAEDD----WAAWNKFTVEHGNFQIVGDDLLVTNPARVQMAMDKNACNSV 349 (441)
T ss_dssp ECHHHHHHHHHHHHHHS-----CEEEEESCSCTTC----HHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHHTCCSEE
T ss_pred cCHHHHHHHHHHHhhhc-----ceeeecCCCChHH----HHHHHHHHHhcCCceEEeccccccCHHHHHHHHHcCCCCEE
Confidence 56777777777777754 4888888866554 4444455544 35766663 34479999999988888888
Q ss_pred ccccCCcccc-chhchHHHHHHcCCcEEe
Q 025789 88 QMEYSLWTRE-IEDDIIPLCRELGIGIVA 115 (248)
Q Consensus 88 q~~~~~~~~~-~~~~~~~~~~~~gi~v~~ 115 (248)
|+..|-.-.- ...++..+|+++|++++.
T Consensus 350 lIKvnqiGGITEalkaa~lA~~~G~~vmv 378 (441)
T 3qtp_A 350 LIKVNQIGTLTETFKTIKMAQEKGWGVMA 378 (441)
T ss_dssp EECGGGTCCHHHHHHHHHHHHHTTCEEEE
T ss_pred EecccccccHHHHHHHHHHHHHcCCeEEE
Confidence 8877643321 125678999999999775
No 46
>3tqp_A Enolase; energy metabolism, lyase; 2.20A {Coxiella burnetii}
Probab=86.23 E-value=12 Score=32.95 Aligned_cols=106 Identities=10% Similarity=0.057 Sum_probs=69.4
Q ss_pred CCCCCCCC---CCCCHHHHHHHHHHHHhHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHc-C-cccEEecc--CCcHH
Q 025789 1 MLDGVSIG---VKGSPEYVRKCCEASLKRLDVDYIDLYYQHRVDTSVSIEDTMGELKKLVEE-G-KIKYIGLS--EASAD 73 (248)
Q Consensus 1 ~~~~~~~~---~~~s~~~i~~~~e~SL~rL~~d~iDl~~lH~~~~~~~~~~~~~~l~~l~~~-G-~ir~iGvS--~~~~~ 73 (248)
|+++|.|. ..++++...+-+.+-++.+ ++++|-.|-+..+ |+.+.++.+. | .|.-+|=- ..++.
T Consensus 250 ~~~~g~Y~l~~~~~t~~eai~~~~~ll~~y-----~i~~IEdPl~~dD----~eg~~~L~~~~~~pI~ivGDel~vt~~~ 320 (428)
T 3tqp_A 250 LYQNGRYDFENNQLTSEEMIDRLTEWTKKY-----PVISIEDGLSEND----WAGWKLLTERLENKVQLVGDDIFVTNPD 320 (428)
T ss_dssp SEETTEECCSSSCBCHHHHHHHHHHHHHHS-----CEEEEECCSCTTC----HHHHHHHHHHHTTTSEEEESTTTTTCHH
T ss_pred hccCCceeccccccCHHHHHHHHHHHHhhc-----ccceEeCCCCccc----HHHHHHHHHhcCCCcceeccccccCCHH
Confidence 34555553 3467777777777667755 5888888865444 3444555544 2 35445643 34889
Q ss_pred HHHHHhccCCcceeccccCCcccc-chhchHHHHHHcCCcEEe
Q 025789 74 TIRRAHAVHPITAVQMEYSLWTRE-IEDDIIPLCRELGIGIVA 115 (248)
Q Consensus 74 ~l~~~~~~~~~~~~q~~~~~~~~~-~~~~~~~~~~~~gi~v~~ 115 (248)
.+.++++....+++|+..+-.-.- ...++..+|+++|+.++.
T Consensus 321 ~~~~~i~~~a~d~i~iKv~~iGGiTealkia~lA~~~G~~~~v 363 (428)
T 3tqp_A 321 ILEKGIKKNIANAILVKLNQIGTLTETLATVGLAKSNKYGVII 363 (428)
T ss_dssp HHHHHHHTTCCSEEEECHHHHCCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHhCCCCEEEecccccCCHHHHHHHHHHHHHcCCeEEE
Confidence 999999988888888876543221 125688999999999554
No 47
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=85.19 E-value=15 Score=30.31 Aligned_cols=177 Identities=16% Similarity=0.121 Sum_probs=101.8
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHhHcCCCcccEEEec-cCC-----CCCCHHHHHHHHHHHHHcCcccEEeccCCcHHH
Q 025789 1 MLDGVSIGVKGSPEYVRKCCEASLKRLDVDYIDLYYQH-RVD-----TSVSIEDTMGELKKLVEEGKIKYIGLSEASADT 74 (248)
Q Consensus 1 ~~~~~~~~~~~s~~~i~~~~e~SL~rL~~d~iDl~~lH-~~~-----~~~~~~~~~~~l~~l~~~G~ir~iGvS~~~~~~ 74 (248)
|.|+|.+ .+.+.+.+.. +.+.+-|-|.||+---- .|. .+..+..++..++.+++.+ .-|.+-++.++.
T Consensus 19 Fsdgg~~---~~~~~a~~~a-~~~v~~GAdiIDIGgestrpga~~v~~~eE~~Rv~pvi~~l~~~~--~piSIDT~~~~v 92 (280)
T 1eye_A 19 FSDGGCY---LDLDDAVKHG-LAMAAAGAGIVDVGGESSRPGATRVDPAVETSRVIPVVKELAAQG--ITVSIDTMRADV 92 (280)
T ss_dssp TCSSCCC---CSHHHHHHHH-HHHHHTTCSEEEEECC--------------HHHHHHHHHHHHHTT--CCEEEECSCHHH
T ss_pred cCCCccc---CCHHHHHHHH-HHHHHCCCCEEEECCccCCCCCCCCCHHHHHHHHHHHHHHhhcCC--CEEEEeCCCHHH
Confidence 5666654 4677777765 44556789999998522 232 1233455777888887763 357888999999
Q ss_pred HHHHhccCCcceeccccCCccccchhchHHHHHHcCCcEEeeccccccccccccccCCCCchhhhhcC-CCCCchhhHHH
Q 025789 75 IRRAHAVHPITAVQMEYSLWTREIEDDIIPLCRELGIGIVAYSPLGRGFFAGKAVVESLPSESILAMH-PRFSGENLEKN 153 (248)
Q Consensus 75 l~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~gi~v~~~~~l~~G~l~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 153 (248)
++++++.+..-++-+ |-... ..++++.++++|..++.+.. .|. +.... .. |.|. ....+.
T Consensus 93 a~aAl~aGa~iINdv--sg~~~--d~~m~~~~a~~~~~vVlmh~--~G~------p~tm~------~~~~~y~-dv~~~v 153 (280)
T 1eye_A 93 ARAALQNGAQMVNDV--SGGRA--DPAMGPLLAEADVPWVLMHW--RAV------SADTP------HVPVRYG-NVVAEV 153 (280)
T ss_dssp HHHHHHTTCCEEEET--TTTSS--CTTHHHHHHHHTCCEEEECC--CCS------CTTCT------TSCCCCS-SHHHHH
T ss_pred HHHHHHcCCCEEEEC--CCCCC--CHHHHHHHHHhCCeEEEEcC--CCC------Ccchh------hcCcchh-HHHHHH
Confidence 999998854333322 22222 25789999999999998754 332 00000 01 1221 122333
Q ss_pred HHHHHHHHHHHHHhCCCHHH--------------------HHHHHHHhCCCCceeecCCCChHhHHHhhcc
Q 025789 154 KLLYTRLETLAAKYGCTTPQ--------------------LALAWLLHQGDDIVPIPGTTKITNLDNNIGS 204 (248)
Q Consensus 154 ~~~~~~l~~ia~~~~~s~~q--------------------~al~~~l~~~~v~~~i~G~~~~~~l~enl~a 204 (248)
...+....+.|.+.|+...+ -.++.+...+. -+++|+|+..-+.+.+++
T Consensus 154 ~~~l~~~i~~a~~~Gi~~~~IilDPg~Gf~k~~~~n~~ll~~l~~~~~~g~--Pvl~G~Srksfi~~~~~~ 222 (280)
T 1eye_A 154 RADLLASVADAVAAGVDPARLVLDPGLGFAKTAQHNWAILHALPELVATGI--PVLVGASRKRFLGALLAG 222 (280)
T ss_dssp HHHHHHHHHHHHHTTCCGGGEEEECCTTSSCCHHHHHHHHHTHHHHHTTSS--CBEECCTTCHHHHHHTCC
T ss_pred HHHHHHHHHHHHHcCCChhhEEEECCCCcccCHHHHHHHHHHHHHhhcCCC--CEEEEecchHHHHhhhcc
Confidence 44555566666677764211 12333333333 568899998777776643
No 48
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=83.71 E-value=4.9 Score=32.99 Aligned_cols=100 Identities=13% Similarity=0.109 Sum_probs=63.4
Q ss_pred CHHHHHHHHHHHHhHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCcccEEeccCCcHHHHHHHhcc--CCcceecc
Q 025789 12 SPEYVRKCCEASLKRLDVDYIDLYYQHRVDTSVSIEDTMGELKKLVEEGKIKYIGLSEASADTIRRAHAV--HPITAVQM 89 (248)
Q Consensus 12 s~~~i~~~~e~SL~rL~~d~iDl~~lH~~~~~~~~~~~~~~l~~l~~~G~ir~iGvS~~~~~~l~~~~~~--~~~~~~q~ 89 (248)
+.+.+.+..++.. .-|-|.||+-.--. .....+.+...++.+++.-. --+.+-+++++.++++++. +..-++
T Consensus 32 ~~~~a~~~a~~~v-~~GAdiIDIg~~s~--~~eE~~rv~~vi~~l~~~~~-~pisIDT~~~~v~~aal~a~~Ga~iIN-- 105 (271)
T 2yci_X 32 DPRPIQEWARRQA-EKGAHYLDVNTGPT--ADDPVRVMEWLVKTIQEVVD-LPCCLDSTNPDAIEAGLKVHRGHAMIN-- 105 (271)
T ss_dssp CCHHHHHHHHHHH-HTTCSEEEEECCSC--SSCHHHHHHHHHHHHHHHCC-CCEEEECSCHHHHHHHHHHCCSCCEEE--
T ss_pred CHHHHHHHHHHHH-HCCCCEEEEcCCcC--chhHHHHHHHHHHHHHHhCC-CeEEEeCCCHHHHHHHHHhCCCCCEEE--
Confidence 3455555554444 68888888876542 22235566677777776511 2477788999999998877 432222
Q ss_pred ccCCccccchhchHHHHHHcCCcEEeecc
Q 025789 90 EYSLWTREIEDDIIPLCRELGIGIVAYSP 118 (248)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~gi~v~~~~~ 118 (248)
..|..... -.++++.++++|..++.+..
T Consensus 106 dvs~~~d~-~~~~~~~~a~~~~~vv~m~~ 133 (271)
T 2yci_X 106 STSADQWK-MDIFFPMAKKYEAAIIGLTM 133 (271)
T ss_dssp EECSCHHH-HHHHHHHHHHHTCEEEEESC
T ss_pred ECCCCccc-cHHHHHHHHHcCCCEEEEec
Confidence 22322111 15789999999999999865
No 49
>1kko_A 3-methylaspartate ammonia-lyase; enolase superfamily, TIM barrel; 1.33A {Citrobacter amalonaticus} SCOP: c.1.11.2 d.54.1.1 PDB: 1kkr_A*
Probab=82.99 E-value=12 Score=32.53 Aligned_cols=107 Identities=14% Similarity=0.057 Sum_probs=72.3
Q ss_pred CCCHHHHHHHHHHHHhHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHc-----Ccc-cEEeccCCcHHHHHHHhccCC
Q 025789 10 KGSPEYVRKCCEASLKRLDVDYIDLYYQHRVDTSVSIEDTMGELKKLVEE-----GKI-KYIGLSEASADTIRRAHAVHP 83 (248)
Q Consensus 10 ~~s~~~i~~~~e~SL~rL~~d~iDl~~lH~~~~~~~~~~~~~~l~~l~~~-----G~i-r~iGvS~~~~~~l~~~~~~~~ 83 (248)
.++++...+ +-+.|+.++.. +++ +|-.|-+.....+-++.+.+++++ -.| -..|=|.++...+.++++...
T Consensus 248 ~~~~~~A~~-~~~~L~~~~~~-~~l-~iEqP~~~~~~~~d~~~~~~l~~~l~~~g~~ipIa~dE~~~~~~~~~~~i~~~a 324 (413)
T 1kko_A 248 DMDPVRCAE-YIASLEKEAQG-LPL-YIEGPVDAGNKPDQIRMLTAITKELTRLGSGVKIVADEWCNTYQDIVDFTDAGS 324 (413)
T ss_dssp TTCHHHHHH-HHHHTGGGGTT-SCE-EEECCCCCSSHHHHHHHHHHHHHHHHHHTCCCEEEECTTCCSHHHHHHHHHTTC
T ss_pred CCCHHHHHH-HHHHHHhccCC-cce-EEECCcCCCCCcccHHHHHHHHHhcccCCCCCcEEcCCCCCCHHHHHHHHHhCC
Confidence 345555544 33345555543 565 777775432235667888888776 333 455667788999999999888
Q ss_pred cceeccccCCcccc-chhchHHHHHHcCCcEEeeccc
Q 025789 84 ITAVQMEYSLWTRE-IEDDIIPLCRELGIGIVAYSPL 119 (248)
Q Consensus 84 ~~~~q~~~~~~~~~-~~~~~~~~~~~~gi~v~~~~~l 119 (248)
++++|+..+-.-.- ...++..+|+++|+.++..+..
T Consensus 325 ~d~i~ik~~~~GGitea~~i~~~A~~~gi~~~~~~~~ 361 (413)
T 1kko_A 325 CHMVQIKTPDLGGIHNIVDAVLYCNKHGMEAYQGGTC 361 (413)
T ss_dssp CSEEEECGGGGSSTHHHHHHHHHHHHHTCEEEECCCT
T ss_pred CCEEEeCccccCCHHHHHHHHHHHHHcCCeEEecCCC
Confidence 89999877654321 1257899999999999997765
No 50
>3qn3_A Enolase; structural genomics, center for structural genomics of infec diseases, csgid, glycolysis, lyase; 2.13A {Campylobacter jejuni}
Probab=82.63 E-value=7.9 Score=33.89 Aligned_cols=108 Identities=14% Similarity=0.028 Sum_probs=69.3
Q ss_pred CCCCCCCC---CCCHHHHHHHHHHHHhHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHc-C-cccEEec-cCCc-HHH
Q 025789 2 LDGVSIGV---KGSPEYVRKCCEASLKRLDVDYIDLYYQHRVDTSVSIEDTMGELKKLVEE-G-KIKYIGL-SEAS-ADT 74 (248)
Q Consensus 2 ~~~~~~~~---~~s~~~i~~~~e~SL~rL~~d~iDl~~lH~~~~~~~~~~~~~~l~~l~~~-G-~ir~iGv-S~~~-~~~ 74 (248)
+++|+|.. .++++...+-+.+-++.. ++++|-.|-+..+ |+.+.++.+. | +|.-.|= +.++ +..
T Consensus 249 ~~~g~y~l~~~~~t~~eai~~~~~ll~~y-----~i~~IEdPl~~dD----~e~~~~L~~~~g~~ipI~gDE~~~tn~~~ 319 (417)
T 3qn3_A 249 FKDGKYHMEGKAFSSEALIERYVELCAKY-----PICSIEDGLAEND----FEGWIKLTEKLGNKIQLVGDDLFVTNEDI 319 (417)
T ss_dssp EETTEEEETTEEECHHHHHHHHHHHHHHS-----CEEEEESSSCTTC----HHHHHHHHHHHTTTSEEEESTTTTTCHHH
T ss_pred ccCCeeecCCCccCHHHHHHHHHHHHhhc-----ceeEEecCCCccc----HHHHHHHHHhhCCCCceecCCcccCCHHH
Confidence 44455543 246777776666666654 5888888865543 4445555554 4 4544433 4455 899
Q ss_pred HHHHhccCCcceeccccCCcccc-chhchHHHHHHcCCcEEeecc
Q 025789 75 IRRAHAVHPITAVQMEYSLWTRE-IEDDIIPLCRELGIGIVAYSP 118 (248)
Q Consensus 75 l~~~~~~~~~~~~q~~~~~~~~~-~~~~~~~~~~~~gi~v~~~~~ 118 (248)
+.++++....+++|+..+-.-.- ...++..+|+.+|+.++.-..
T Consensus 320 ~~~~i~~~a~d~i~iKv~qiGGiTea~kia~lA~~~G~~v~vsh~ 364 (417)
T 3qn3_A 320 LREGIIKKMANAVLIKPNQIGTITQTMRTVRLAQRNNYKCVMSHR 364 (417)
T ss_dssp HHHHHHHTCCSEEEECHHHHCSHHHHHHHHHHHHHTTCEEEEECC
T ss_pred HHHHHHhCCCCEEEecCCCCCCHHHHHHHHHHHHHcCCeEEEeCC
Confidence 99999888888888876543221 125688999999999876443
No 51
>2pa6_A Enolase; glycolysis, lyase, magnesium, metal-binding, structural GENO NPPSFA; 1.85A {Methanocaldococcus jannaschii}
Probab=79.30 E-value=6 Score=34.64 Aligned_cols=104 Identities=13% Similarity=0.066 Sum_probs=68.2
Q ss_pred CCCCCCC---CCCHHHHHHHHHHHHhHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCcccEE-ecc-CCcHHHHHH
Q 025789 3 DGVSIGV---KGSPEYVRKCCEASLKRLDVDYIDLYYQHRVDTSVSIEDTMGELKKLVEEGKIKYI-GLS-EASADTIRR 77 (248)
Q Consensus 3 ~~~~~~~---~~s~~~i~~~~e~SL~rL~~d~iDl~~lH~~~~~~~~~~~~~~l~~l~~~G~ir~i-GvS-~~~~~~l~~ 77 (248)
+|+.|.. .++++...+-+.+.|+.+ ++++|-.|-+... ++.+.++++...|.-. |=+ ..+...+.+
T Consensus 256 ~n~~~~~~n~~~~~~~ai~~~~~~l~~~-----~i~~iEeP~~~~d----~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~ 326 (427)
T 2pa6_A 256 KDGYYYVEGKKLTREELLDYYKALVDEY-----PIVSIEDPFHEED----FEGFAMITKELDIQIVGDDLFVTNVERLRK 326 (427)
T ss_dssp ETTEEEETTEEECHHHHHHHHHHHHHHS-----CEEEEECCSCTTC----HHHHHHHHHHSSSEEEESTTTTTCHHHHHH
T ss_pred cCCceeecCCCCCHHHHHHHHHHHHhhC-----CCcEEEcCCChhh----HHHHHHHHhhCCCeEEeCccccCCHHHHHH
Confidence 3555532 246766666666666654 6888888865433 5566677766555333 334 234899999
Q ss_pred HhccCCcceeccccCCcccc-chhchHHHHHHcCCcEEe
Q 025789 78 AHAVHPITAVQMEYSLWTRE-IEDDIIPLCRELGIGIVA 115 (248)
Q Consensus 78 ~~~~~~~~~~q~~~~~~~~~-~~~~~~~~~~~~gi~v~~ 115 (248)
+++....+++|+..+-.-.- ...++...|+++|+.++.
T Consensus 327 ~i~~~a~d~i~ik~~~~GGitea~~ia~lA~~~g~~~~~ 365 (427)
T 2pa6_A 327 GIEMKAANALLLKVNQIGTLSEAVDAAQLAFRNGYGVVV 365 (427)
T ss_dssp HHHHTCCSEEEECHHHHCSHHHHHHHHHHHHTTTCEEEE
T ss_pred HHHhCCCCEEEEcccccCCHHHHHHHHHHHHHcCCeEEE
Confidence 98888888998866543211 125788999999999876
No 52
>2fym_A Enolase; RNA degradosome, enolase, lyase; 1.60A {Escherichia coli} SCOP: c.1.11.1 d.54.1.1 PDB: 1e9i_A 3h8a_A
Probab=78.53 E-value=14 Score=32.32 Aligned_cols=100 Identities=9% Similarity=-0.001 Sum_probs=64.8
Q ss_pred CCHHHHHHHHHHHHhHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHc-C-cccE-Eec-cCCcHHHHHHHhccCCcce
Q 025789 11 GSPEYVRKCCEASLKRLDVDYIDLYYQHRVDTSVSIEDTMGELKKLVEE-G-KIKY-IGL-SEASADTIRRAHAVHPITA 86 (248)
Q Consensus 11 ~s~~~i~~~~e~SL~rL~~d~iDl~~lH~~~~~~~~~~~~~~l~~l~~~-G-~ir~-iGv-S~~~~~~l~~~~~~~~~~~ 86 (248)
++.+...+-+++-.++ .++++|-.|-+..+ ++.+.++.++ | .|.- .|= +.++...+.++++....++
T Consensus 267 ~t~~~ai~~~~~L~~~-----~~i~~iEePl~~~d----~~~~~~l~~~~~~~ipIa~dEl~~~~~~~~~~~i~~~a~d~ 337 (431)
T 2fym_A 267 FTSEEFTHFLEELTKQ-----YPIVSIEDGLDESD----WDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANS 337 (431)
T ss_dssp ECHHHHHHHHHHHHHH-----SCEEEEESCSCTTC----HHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHTTCCSE
T ss_pred CCHHHHHHHHHHHHHh-----CCceEEECCCCccc----HHHHHHHHHHhCCCCeEEeCCcccCCHHHHHHHHHhCCCCE
Confidence 5666655544443332 36889988865544 4455555544 2 4432 233 6678999999999888899
Q ss_pred eccccCCccccc-hhchHHHHHHcCCcEEeeccc
Q 025789 87 VQMEYSLWTREI-EDDIIPLCRELGIGIVAYSPL 119 (248)
Q Consensus 87 ~q~~~~~~~~~~-~~~~~~~~~~~gi~v~~~~~l 119 (248)
+|+..+-.-.-- ..++..+|+++|+.++..+-.
T Consensus 338 i~ik~~~~GGite~~~i~~~A~~~g~~~~~~h~~ 371 (431)
T 2fym_A 338 ILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRS 371 (431)
T ss_dssp EEECGGGTCSHHHHHHHHHHHHHTTCEEEEECCS
T ss_pred EEECccccCCHHHHHHHHHHHHHCCCeEEEeCCC
Confidence 999766533211 256889999999999764444
No 53
>3otr_A Enolase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel, TIM barrel; 2.75A {Toxoplasma gondii}
Probab=78.17 E-value=28 Score=30.74 Aligned_cols=98 Identities=14% Similarity=0.087 Sum_probs=64.9
Q ss_pred CCHHHHHHHHHHHHhHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCcccEEec--cCCcHHHHHHHhccCCcceec
Q 025789 11 GSPEYVRKCCEASLKRLDVDYIDLYYQHRVDTSVSIEDTMGELKKLVEEGKIKYIGL--SEASADTIRRAHAVHPITAVQ 88 (248)
Q Consensus 11 ~s~~~i~~~~e~SL~rL~~d~iDl~~lH~~~~~~~~~~~~~~l~~l~~~G~ir~iGv--S~~~~~~l~~~~~~~~~~~~q 88 (248)
.+++.+.+-+.+-+++. ++++|-.|-...+++ .|..|.+.. ..+|.-+|= +..++..++++++....++++
T Consensus 281 ~t~~Elid~y~~lle~y-----pIv~IEDPl~~dD~e-g~a~Lt~~l-g~~iqIvGDDl~vTn~~~i~~~Ie~~a~n~Il 353 (452)
T 3otr_A 281 LTGEKLKEVYEGWLKKY-----PIISVEDPFDQDDFA-SFSAFTKDV-GEKTQVIGDDILVTNILRIEKALKDKACNCLL 353 (452)
T ss_dssp ECHHHHHHHHHHHHHHS-----CEEEEECCSCTTCHH-HHHHHHHHH-TTTSEEEESTTTTTCHHHHHHHHHHTCCSEEE
T ss_pred ccHHHHHHHHHHHHhhh-----CceEEecCCChhhHH-HHHHHHHhh-CCCeEEEeCccccCCHHHHHHHHhcCCCCEEE
Confidence 57788887777777764 488998887665554 233332222 124666663 345799999998888888887
Q ss_pred cccCCcccc-chhchHHHHHHcCCcEEe
Q 025789 89 MEYSLWTRE-IEDDIIPLCRELGIGIVA 115 (248)
Q Consensus 89 ~~~~~~~~~-~~~~~~~~~~~~gi~v~~ 115 (248)
+..|-.-.- ...++..+|+++|++++.
T Consensus 354 IKvnQIGgITEalka~~lA~~~G~~vmv 381 (452)
T 3otr_A 354 LKVNQIGSVTEAIEACLLAQKSGWGVQV 381 (452)
T ss_dssp ECHHHHCCHHHHHHHHHHHHHTTCEEEE
T ss_pred eeccccccHHHHHHHHHHHHHcCCeEEE
Confidence 766532221 125678899999999776
No 54
>3k13_A 5-methyltetrahydrofolate-homocysteine methyltrans; 5-methyltetrahydrofolate,methyltransferase, TIM barrel, STRU genomics, PSI-2; HET: MSE THH GOL; 2.00A {Bacteroides thetaiotaomicron}
Probab=77.42 E-value=30 Score=28.75 Aligned_cols=104 Identities=11% Similarity=0.031 Sum_probs=60.6
Q ss_pred CHHHHHHHHHHHHhHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHc--Ccc-cEEeccCCcHHHHHHHhcc--CCcce
Q 025789 12 SPEYVRKCCEASLKRLDVDYIDLYYQHRVDTSVSIEDTMGELKKLVEE--GKI-KYIGLSEASADTIRRAHAV--HPITA 86 (248)
Q Consensus 12 s~~~i~~~~e~SL~rL~~d~iDl~~lH~~~~~~~~~~~~~~l~~l~~~--G~i-r~iGvS~~~~~~l~~~~~~--~~~~~ 86 (248)
+.+.+.+..++.. +-|-|.||+-. .....+.++.++.+..+.+. ... --|.+-++.++.++++++. +..-+
T Consensus 35 ~~~~a~~~A~~~v-~~GAdiIDIg~---g~~~v~~~eem~rvv~~i~~~~~~~~vpisIDT~~~~V~eaaL~~~~Ga~iI 110 (300)
T 3k13_A 35 KYDEALSIARQQV-EDGALVIDVNM---DDGLLDARTEMTTFLNLIMSEPEIARVPVMIDSSKWEVIEAGLKCLQGKSIV 110 (300)
T ss_dssp CHHHHHHHHHHHH-HTTCSEEEEEC---CCTTSCHHHHHHHHHHHHHTCHHHHTSCEEEECSCHHHHHHHHHHCSSCCEE
T ss_pred CHHHHHHHHHHHH-HCCCCEEEECC---CCCCCCHHHHHHHHHHHHHHhhhcCCCeEEEeCCCHHHHHHHHHhcCCCCEE
Confidence 4455555554444 67999999986 12223343433333333331 011 2478889999999999883 33222
Q ss_pred eccccCCccc--cchhchHHHHHHcCCcEEeecccccc
Q 025789 87 VQMEYSLWTR--EIEDDIIPLCRELGIGIVAYSPLGRG 122 (248)
Q Consensus 87 ~q~~~~~~~~--~~~~~~~~~~~~~gi~v~~~~~l~~G 122 (248)
+..|.... .. .++++.++++|..++.+.--..|
T Consensus 111 --NdIs~~~~d~~~-~~~~~l~a~~ga~vV~mh~d~~G 145 (300)
T 3k13_A 111 --NSISLKEGEEVF-LEHARIIKQYGAATVVMAFDEKG 145 (300)
T ss_dssp --EEECSTTCHHHH-HHHHHHHHHHTCEEEEESEETTE
T ss_pred --EeCCcccCChhH-HHHHHHHHHhCCeEEEEeeCCCC
Confidence 23333321 11 37899999999999987543333
No 55
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=77.37 E-value=21 Score=30.61 Aligned_cols=98 Identities=9% Similarity=0.001 Sum_probs=65.1
Q ss_pred CCHHHHHHHHHHHHhHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCcccEEe-ccCCcHHHHHHHhccCCcceecc
Q 025789 11 GSPEYVRKCCEASLKRLDVDYIDLYYQHRVDTSVSIEDTMGELKKLVEEGKIKYIG-LSEASADTIRRAHAVHPITAVQM 89 (248)
Q Consensus 11 ~s~~~i~~~~e~SL~rL~~d~iDl~~lH~~~~~~~~~~~~~~l~~l~~~G~ir~iG-vS~~~~~~l~~~~~~~~~~~~q~ 89 (248)
++.+...+-++. |+.++++++ ..|-+. +-++.+.++++.-.|--++ =+-+++..++++++....+++|+
T Consensus 205 ~~~~~a~~~~~~-l~~~~i~~i-----EqP~~~----~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~i 274 (391)
T 2qgy_A 205 EDLDQTKSFLKE-VSSFNPYWI-----EEPVDG----ENISLLTEIKNTFNMKVVTGEKQSGLVHFRELISRNAADIFNP 274 (391)
T ss_dssp SCHHHHHHHHHH-HGGGCCSEE-----ECSSCT----TCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCCSEECC
T ss_pred CCHHHHHHHHHH-HHhcCCCeE-----eCCCCh----hhHHHHHHHHhhCCCCEEEcCCcCCHHHHHHHHHcCCCCEEEE
Confidence 455555554444 777776654 344321 3466677777765554443 35567899999998888999999
Q ss_pred ccCCcccc-chhchHHHHHHcCCcEEeecc
Q 025789 90 EYSLWTRE-IEDDIIPLCRELGIGIVAYSP 118 (248)
Q Consensus 90 ~~~~~~~~-~~~~~~~~~~~~gi~v~~~~~ 118 (248)
..+..-.- ....+..+|+++|+.++..+.
T Consensus 275 k~~~~GGit~~~~i~~~A~~~gi~~~~~~~ 304 (391)
T 2qgy_A 275 DISGMGGLIDIIEISNEASNNGIFISPHCW 304 (391)
T ss_dssp BTTTSSCHHHHHHHHHHHHHTTCEECCBCC
T ss_pred CcchhCCHHHHHHHHHHHHHCCCEEeccCC
Confidence 77654321 125788999999999988765
No 56
>2poz_A Putative dehydratase; octamer, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics, nysgxrc; 2.04A {Mesorhizobium loti}
Probab=77.01 E-value=11 Score=32.29 Aligned_cols=83 Identities=10% Similarity=0.010 Sum_probs=55.1
Q ss_pred cEEEeccCCCCCCHHHHHHHHHHHHHcCcccEEec-cCCcHHHHHHHhccCCcceeccccCCcccc-chhchHHHHHHcC
Q 025789 33 DLYYQHRVDTSVSIEDTMGELKKLVEEGKIKYIGL-SEASADTIRRAHAVHPITAVQMEYSLWTRE-IEDDIIPLCRELG 110 (248)
Q Consensus 33 Dl~~lH~~~~~~~~~~~~~~l~~l~~~G~ir~iGv-S~~~~~~l~~~~~~~~~~~~q~~~~~~~~~-~~~~~~~~~~~~g 110 (248)
++.++..|-+. +-++.+.++++.-.|--++- +-++...++++++....+++|+..+-.-.- ....+..+|+++|
T Consensus 226 ~i~~iE~P~~~----~~~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g 301 (392)
T 2poz_A 226 DICFVEEPCDP----FDNGALKVISEQIPLPIAVGERVYTRFGFRKIFELQACGIIQPDIGTAGGLMETKKICAMAEAYN 301 (392)
T ss_dssp CEEEEECCSCT----TCHHHHHHHHHHCSSCEEECTTCCHHHHHHHHHTTTCCSEECCCTTTSSCHHHHHHHHHHHHTTT
T ss_pred CCCEEECCCCc----ccHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcCCCCEEecCccccCCHHHHHHHHHHHHHcC
Confidence 34445555322 23566667776655544433 455788899999888889999876654321 1257889999999
Q ss_pred CcEEeeccc
Q 025789 111 IGIVAYSPL 119 (248)
Q Consensus 111 i~v~~~~~l 119 (248)
+.++..+..
T Consensus 302 ~~~~~h~~~ 310 (392)
T 2poz_A 302 MRVAPHVCG 310 (392)
T ss_dssp CEECCCCCS
T ss_pred CeEecCCCC
Confidence 999887654
No 57
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=76.99 E-value=5.4 Score=34.20 Aligned_cols=74 Identities=9% Similarity=-0.061 Sum_probs=52.6
Q ss_pred HHHHHHHHHHcCcccEEec-cCCcHHHHHHHhccCCcceeccccCCcccc-chhchHHHHHHcCCcEEeecccccc
Q 025789 49 TMGELKKLVEEGKIKYIGL-SEASADTIRRAHAVHPITAVQMEYSLWTRE-IEDDIIPLCRELGIGIVAYSPLGRG 122 (248)
Q Consensus 49 ~~~~l~~l~~~G~ir~iGv-S~~~~~~l~~~~~~~~~~~~q~~~~~~~~~-~~~~~~~~~~~~gi~v~~~~~l~~G 122 (248)
-++.+.++++.-.|--++. +-++++.++++++....+++|+..+..-.- ....+..+|+++|+.++..+.+.++
T Consensus 225 ~~~~~~~l~~~~~iPI~~de~i~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~~es~ 300 (379)
T 2rdx_A 225 SYEECQQVRRVADQPMKLDECVTGLHMAQRIVADRGAEICCLKISNLGGLSKARRTRDFLIDNRMPVVAEDSWGGE 300 (379)
T ss_dssp SHHHHHHHHTTCCSCEEECTTCCSHHHHHHHHHHTCCSEEEEETTTTTSHHHHHHHHHHHHHTTCCEEEECSBCSH
T ss_pred CHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEEeccccCCHHHHHHHHHHHHHcCCeEEEeeccCcH
Confidence 4667777777655544433 456788899998888889999877764321 1257889999999999988655443
No 58
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=75.88 E-value=32 Score=28.29 Aligned_cols=138 Identities=12% Similarity=0.178 Sum_probs=81.0
Q ss_pred CCHHHHHHHHHHHHhHcCCCcccEEEec-cCCCC-CCH----HHHHHHHHHHHHc-CcccEEeccCCcHHHHHHHhccCC
Q 025789 11 GSPEYVRKCCEASLKRLDVDYIDLYYQH-RVDTS-VSI----EDTMGELKKLVEE-GKIKYIGLSEASADTIRRAHAVHP 83 (248)
Q Consensus 11 ~s~~~i~~~~e~SL~rL~~d~iDl~~lH-~~~~~-~~~----~~~~~~l~~l~~~-G~ir~iGvS~~~~~~l~~~~~~~~ 83 (248)
.+.+.+.+..+ .+..-|-|.||+---- +|... ... +.+...++.+++. +. -|.+-++.++.++++++.+.
T Consensus 35 ~~~~~a~~~a~-~~v~~GAdiIDIGgestrPga~~v~~~eE~~rv~pvi~~l~~~~~~--piSIDT~~~~va~aAl~aGa 111 (282)
T 1aj0_A 35 NSLIDAVKHAN-LMINAGATIIDVGGESTRPGAAEVSVEEELQRVIPVVEAIAQRFEV--WISVDTSKPEVIRESAKVGA 111 (282)
T ss_dssp THHHHHHHHHH-HHHHHTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHHHHCCC--EEEEECCCHHHHHHHHHTTC
T ss_pred CCHHHHHHHHH-HHHHCCCCEEEECCCcCCCCCCcCCHHHHHHHHHHHHHHHHhhcCC--eEEEeCCCHHHHHHHHHcCC
Confidence 35566666554 4455688999987743 34422 222 2345666666655 32 57888999999999998854
Q ss_pred cceeccccCCccccchhchHHHHHHcCCcEEeeccccccccccccccCCCCchhhhhcCCCCCchhhHHHHHHHHHHHHH
Q 025789 84 ITAVQMEYSLWTREIEDDIIPLCRELGIGIVAYSPLGRGFFAGKAVVESLPSESILAMHPRFSGENLEKNKLLYTRLETL 163 (248)
Q Consensus 84 ~~~~q~~~~~~~~~~~~~~~~~~~~~gi~v~~~~~l~~G~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i 163 (248)
.-++-+. -. . ..++++.++++|..++.+.- .|.-. .. ...|.|. ....+....+....+.
T Consensus 112 ~iINdvs--g~-~--d~~~~~~~a~~~~~vVlmh~--~G~p~------tm------~~~~~y~-d~~~ev~~~l~~~i~~ 171 (282)
T 1aj0_A 112 HIINDIR--SL-S--EPGALEAAAETGLPVCLMHM--QGNPK------TM------QEAPKYD-DVFAEVNRYFIEQIAR 171 (282)
T ss_dssp CEEEETT--TT-C--STTHHHHHHHHTCCEEEECC--SSCTT------CC------SCCCCCS-CHHHHHHHHHHHHHHH
T ss_pred CEEEECC--CC-C--CHHHHHHHHHhCCeEEEEcc--CCCCc------cc------cccCccc-hHHHHHHHHHHHHHHH
Confidence 3333332 22 1 35789999999999998754 33210 00 0112332 2234445555566666
Q ss_pred HHHhCCCH
Q 025789 164 AAKYGCTT 171 (248)
Q Consensus 164 a~~~~~s~ 171 (248)
|.+.|++.
T Consensus 172 a~~~Gi~~ 179 (282)
T 1aj0_A 172 CEQAGIAK 179 (282)
T ss_dssp HHHTTCCG
T ss_pred HHHcCCCh
Confidence 77777653
No 59
>2o56_A Putative mandelate racemase; dehydratase, structural genomics, protein structure initiati 2; 2.00A {Salmonella typhimurium}
Probab=75.70 E-value=15 Score=31.70 Aligned_cols=70 Identities=7% Similarity=-0.084 Sum_probs=48.5
Q ss_pred HHHHHHHHHcCcccEEe-ccCCcHHHHHHHhccCCcceeccccCCcccc-chhchHHHHHHcCCcEEeeccc
Q 025789 50 MGELKKLVEEGKIKYIG-LSEASADTIRRAHAVHPITAVQMEYSLWTRE-IEDDIIPLCRELGIGIVAYSPL 119 (248)
Q Consensus 50 ~~~l~~l~~~G~ir~iG-vS~~~~~~l~~~~~~~~~~~~q~~~~~~~~~-~~~~~~~~~~~~gi~v~~~~~l 119 (248)
++.+.+++++-.|--++ =+-++...++++++....+++|+..+-.-.- ....+..+|+++|+.++..+..
T Consensus 255 ~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGite~~~i~~~A~~~g~~~~~h~~~ 326 (407)
T 2o56_A 255 PAQMKQVADKVNIPLAAGERIYWRWGYRPFLENGSLSVIQPDICTCGGITEVKKICDMAHVYDKTVQIHVCG 326 (407)
T ss_dssp HHHHHHHHHHCCSCEEECTTCCHHHHHHHHHHTTCCSEECCCTTTTTHHHHHHHHHHHHHTTTCEECCCCCS
T ss_pred HHHHHHHHHhCCCCEEeCCCcCCHHHHHHHHHcCCCCEEecCccccCCHHHHHHHHHHHHHcCCeEeecCCC
Confidence 55566666654454333 3445788888888888889998877654321 1257889999999999887664
No 60
>2nql_A AGR_PAT_674P, isomerase/lactonizing enzyme; enolase, structural genomics, protein structure initiative, nysgxrc; 1.80A {Agrobacterium tumefaciens str} PDB: 4dn1_A
Probab=75.12 E-value=12 Score=32.20 Aligned_cols=101 Identities=17% Similarity=0.126 Sum_probs=67.5
Q ss_pred CCHHHHHHHHHHHHhHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCcccEEec-cCCcHHHHHHHhccCCcceecc
Q 025789 11 GSPEYVRKCCEASLKRLDVDYIDLYYQHRVDTSVSIEDTMGELKKLVEEGKIKYIGL-SEASADTIRRAHAVHPITAVQM 89 (248)
Q Consensus 11 ~s~~~i~~~~e~SL~rL~~d~iDl~~lH~~~~~~~~~~~~~~l~~l~~~G~ir~iGv-S~~~~~~l~~~~~~~~~~~~q~ 89 (248)
++.+...+-++ .|+.+++++| ..|-.. +-++.+.++++.-.|--++- +-++++.++++++....+++|+
T Consensus 219 ~~~~~a~~~~~-~l~~~~i~~i-----EqP~~~----~d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~i 288 (388)
T 2nql_A 219 QTPERALELIA-EMQPFDPWFA-----EAPVWT----EDIAGLEKVSKNTDVPIAVGEEWRTHWDMRARIERCRIAIVQP 288 (388)
T ss_dssp SCHHHHHHHHH-HHGGGCCSCE-----ECCSCT----TCHHHHHHHHTSCCSCEEECTTCCSHHHHHHHHTTSCCSEECC
T ss_pred CCHHHHHHHHH-HHhhcCCCEE-----ECCCCh----hhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEe
Confidence 45666555444 3788877765 344221 34677777877655654443 4568899999999888899988
Q ss_pred ccCCcccc-chhchHHHHHHcCCcEEeecccccc
Q 025789 90 EYSLWTRE-IEDDIIPLCRELGIGIVAYSPLGRG 122 (248)
Q Consensus 90 ~~~~~~~~-~~~~~~~~~~~~gi~v~~~~~l~~G 122 (248)
..+. -.- ....+..+|+++|+.++..+.+.++
T Consensus 289 k~~~-GGit~~~~i~~~A~~~g~~~~~h~~~es~ 321 (388)
T 2nql_A 289 EMGH-KGITNFIRIGALAAEHGIDVIPHATVGAG 321 (388)
T ss_dssp CHHH-HCHHHHHHHHHHHHHHTCEECCCCCSSCS
T ss_pred cCCC-CCHHHHHHHHHHHHHcCCeEEeecCCCcH
Confidence 6654 211 1256789999999999887555444
No 61
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=74.73 E-value=7.6 Score=33.33 Aligned_cols=101 Identities=10% Similarity=0.055 Sum_probs=65.6
Q ss_pred CCHHHHHHHHHHHHhHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCcccEEec-cCCcHHHHHHHhccCCcceecc
Q 025789 11 GSPEYVRKCCEASLKRLDVDYIDLYYQHRVDTSVSIEDTMGELKKLVEEGKIKYIGL-SEASADTIRRAHAVHPITAVQM 89 (248)
Q Consensus 11 ~s~~~i~~~~e~SL~rL~~d~iDl~~lH~~~~~~~~~~~~~~l~~l~~~G~ir~iGv-S~~~~~~l~~~~~~~~~~~~q~ 89 (248)
++.+...+- -+.|+.+|+++|. .|-+. +-++.+.++++.-.|--++. +-++++.++++++....+++|+
T Consensus 201 ~~~~~a~~~-~~~l~~~~i~~iE-----qP~~~----~~~~~~~~l~~~~~iPI~~de~i~~~~~~~~~i~~~~~d~v~i 270 (384)
T 2pgw_A 201 WSVHDAINM-CRKLEKYDIEFIE-----QPTVS----WSIPAMAHVREKVGIPIVADQAAFTLYDVYEICRQRAADMICI 270 (384)
T ss_dssp CCHHHHHHH-HHHHGGGCCSEEE-----CCSCT----TCHHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHTTCCSEEEE
T ss_pred CCHHHHHHH-HHHHHhcCCCEEe-----CCCCh----hhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEE
Confidence 455555543 3467777776544 44321 24666777777655654444 4457899999998888899888
Q ss_pred ccCCccc-cchhchHHHHHHcCCcEEeeccccc
Q 025789 90 EYSLWTR-EIEDDIIPLCRELGIGIVAYSPLGR 121 (248)
Q Consensus 90 ~~~~~~~-~~~~~~~~~~~~~gi~v~~~~~l~~ 121 (248)
.-+-.-. .....+..+|+++|+.++..+.+.+
T Consensus 271 k~~~~GGit~~~~i~~~A~~~g~~~~~~~~~es 303 (384)
T 2pgw_A 271 GPREIGGIQPMMKAAAVAEAAGLKICIHSSFTT 303 (384)
T ss_dssp CHHHHTSHHHHHHHHHHHHHTTCCEEECCCSCC
T ss_pred cchhhCCHHHHHHHHHHHHHCCCeEeeccCcCC
Confidence 6554321 1125788999999999998764443
No 62
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=74.35 E-value=24 Score=29.99 Aligned_cols=99 Identities=11% Similarity=0.059 Sum_probs=64.2
Q ss_pred CCHHHHHHHHHHHHhHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCcccEE-eccCCcHHHHHHHhccCCcceecc
Q 025789 11 GSPEYVRKCCEASLKRLDVDYIDLYYQHRVDTSVSIEDTMGELKKLVEEGKIKYI-GLSEASADTIRRAHAVHPITAVQM 89 (248)
Q Consensus 11 ~s~~~i~~~~e~SL~rL~~d~iDl~~lH~~~~~~~~~~~~~~l~~l~~~G~ir~i-GvS~~~~~~l~~~~~~~~~~~~q~ 89 (248)
++.+...+-++ .|+.+|++++ ..|-.. +-++.+.++++.-.|--+ |=+-++...++++++....+++|+
T Consensus 202 ~~~~~a~~~~~-~l~~~~i~~i-----EqP~~~----~d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~i 271 (371)
T 2ovl_A 202 WTVDGAIRAAR-ALAPFDLHWI-----EEPTIP----DDLVGNARIVRESGHTIAGGENLHTLYDFHNAVRAGSLTLPEP 271 (371)
T ss_dssp SCHHHHHHHHH-HHGGGCCSEE-----ECCSCT----TCHHHHHHHHHHHCSCEEECTTCCSHHHHHHHHHHTCCSEECC
T ss_pred CCHHHHHHHHH-HHHhcCCCEE-----ECCCCc----ccHHHHHHHHhhCCCCEEeCCCCCCHHHHHHHHHcCCCCEEee
Confidence 45555555444 3777776644 444322 235666666665445433 335568899999998888999999
Q ss_pred ccCCcccc-chhchHHHHHHcCCcEEeeccc
Q 025789 90 EYSLWTRE-IEDDIIPLCRELGIGIVAYSPL 119 (248)
Q Consensus 90 ~~~~~~~~-~~~~~~~~~~~~gi~v~~~~~l 119 (248)
..+-.-.- ....+..+|+++|+.++..+.+
T Consensus 272 k~~~~GGi~~~~~i~~~A~~~gi~~~~h~~~ 302 (371)
T 2ovl_A 272 DVSNIGGYTTFRKVAALAEANNMLLTSHGVH 302 (371)
T ss_dssp CTTTTTSHHHHHHHHHHHHHTTCCEEECSCH
T ss_pred CccccCCHHHHHHHHHHHHHcCCeEccccHH
Confidence 77654321 1257889999999999986543
No 63
>2dqw_A Dihydropteroate synthase; dimer, structural genomics; 1.65A {Thermus thermophilus} PDB: 2dza_A* 2dzb_A*
Probab=73.60 E-value=38 Score=28.06 Aligned_cols=107 Identities=14% Similarity=0.162 Sum_probs=60.9
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHhHcCCCcccEEEec-cCC-----CCCCHHHHHHHHHHHHHcCcccEEeccCCcHHH
Q 025789 1 MLDGVSIGVKGSPEYVRKCCEASLKRLDVDYIDLYYQH-RVD-----TSVSIEDTMGELKKLVEEGKIKYIGLSEASADT 74 (248)
Q Consensus 1 ~~~~~~~~~~~s~~~i~~~~e~SL~rL~~d~iDl~~lH-~~~-----~~~~~~~~~~~l~~l~~~G~ir~iGvS~~~~~~ 74 (248)
|.|+|.+. +.+.+.+.. +.+..-|-|.||+=--- +|. .+..++.++..++.+++.+. -|.+-++.++.
T Consensus 42 Fsdgg~~~---~~~~a~~~a-~~~v~~GAdIIDIGgeSTrPga~~v~~~eE~~Rv~pvI~~l~~~~v--piSIDT~~~~V 115 (294)
T 2dqw_A 42 FSDGGRYL---DPERALERA-REMVAEGADILDLGAESTRPGAAPVPVEEEKRRLLPVLEAVLSLGV--PVSVDTRKPEV 115 (294)
T ss_dssp --------------CCHHHH-HHHHHHTCSEEEEECC-----------CCHHHHHHHHHHHHHTTCS--CEEEECSCHHH
T ss_pred CCCCCCCC---CHHHHHHHH-HHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhCCC--eEEEECCCHHH
Confidence 56677652 333333333 23445688999987632 232 22334567777877776632 47888999999
Q ss_pred HHHHhccCCcceeccccCCccccchhchHHHHHHcCCcEEeecc
Q 025789 75 IRRAHAVHPITAVQMEYSLWTREIEDDIIPLCRELGIGIVAYSP 118 (248)
Q Consensus 75 l~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~gi~v~~~~~ 118 (248)
++++++.+.--++ ..|-. . ..++++.++++|..++.+.-
T Consensus 116 a~aAl~aGa~iIN--dVsg~-~--d~~m~~v~a~~~~~vVlmh~ 154 (294)
T 2dqw_A 116 AEEALKLGAHLLN--DVTGL-R--DERMVALAARHGVAAVVMHM 154 (294)
T ss_dssp HHHHHHHTCSEEE--CSSCS-C--CHHHHHHHHHHTCEEEEECC
T ss_pred HHHHHHhCCCEEE--ECCCC-C--ChHHHHHHHHhCCCEEEEcC
Confidence 9999887542222 22322 1 35789999999999998754
No 64
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=72.90 E-value=12 Score=31.76 Aligned_cols=97 Identities=9% Similarity=-0.027 Sum_probs=65.2
Q ss_pred CCHHHHHHHHHHHHhHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCcccEEec-cCCcHHHHHHHhccCCcceecc
Q 025789 11 GSPEYVRKCCEASLKRLDVDYIDLYYQHRVDTSVSIEDTMGELKKLVEEGKIKYIGL-SEASADTIRRAHAVHPITAVQM 89 (248)
Q Consensus 11 ~s~~~i~~~~e~SL~rL~~d~iDl~~lH~~~~~~~~~~~~~~l~~l~~~G~ir~iGv-S~~~~~~l~~~~~~~~~~~~q~ 89 (248)
++.+...+-++. |+.++++++ ..|-.. +-++.+.++++.-.|--++- +-++++.++++++....+++|+
T Consensus 200 ~~~~~a~~~~~~-l~~~~i~~i-----E~P~~~----~~~~~~~~l~~~~~iPI~~de~~~~~~~~~~~i~~~~~d~v~i 269 (359)
T 1mdl_A 200 LDVPAAIKRSQA-LQQEGVTWI-----EEPTLQ----HDYEGHQRIQSKLNVPVQMGENWLGPEEMFKALSIGACRLAMP 269 (359)
T ss_dssp SCHHHHHHHHHH-HHHHTCSCE-----ECCSCT----TCHHHHHHHHHTCSSCEEECTTCCSHHHHHHHHHTTCCSEECC
T ss_pred CCHHHHHHHHHH-HHHhCCCeE-----ECCCCh----hhHHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHcCCCCEEee
Confidence 455555554444 777777654 333221 34677777877766654443 4567899999999888999999
Q ss_pred ccCCcccc-chhchHHHHHHcCCcEEeec
Q 025789 90 EYSLWTRE-IEDDIIPLCRELGIGIVAYS 117 (248)
Q Consensus 90 ~~~~~~~~-~~~~~~~~~~~~gi~v~~~~ 117 (248)
.-+-.-.- ...++..+|+++|+.++..+
T Consensus 270 k~~~~GGi~~~~~i~~~A~~~g~~~~~~~ 298 (359)
T 1mdl_A 270 DAMKIGGVTGWIRASALAQQFGIPMSSHL 298 (359)
T ss_dssp BTTTTTHHHHHHHHHHHHHHTTCCBCCBS
T ss_pred cchhhCCHHHHHHHHHHHHHcCCeEeecc
Confidence 77664321 12578899999999988764
No 65
>3uj2_A Enolase 1; enzyme function initiative, EFI, lyase; 2.00A {Anaerostipes caccae}
Probab=72.61 E-value=39 Score=29.78 Aligned_cols=95 Identities=11% Similarity=0.088 Sum_probs=63.0
Q ss_pred CHHHHHHHHHHHHhHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHc-C-cccEEeccC-C-cHHHHHHHhccCCccee
Q 025789 12 SPEYVRKCCEASLKRLDVDYIDLYYQHRVDTSVSIEDTMGELKKLVEE-G-KIKYIGLSE-A-SADTIRRAHAVHPITAV 87 (248)
Q Consensus 12 s~~~i~~~~e~SL~rL~~d~iDl~~lH~~~~~~~~~~~~~~l~~l~~~-G-~ir~iGvS~-~-~~~~l~~~~~~~~~~~~ 87 (248)
+++...+-+.+-|+.+ ++++|-.|-+..+ ++.+.++.+. | .|.-.|=-. . ++..+.++++....+++
T Consensus 290 t~~eai~~~~~lle~y-----~i~~IEdPl~~dD----~eg~~~L~~~~~~~ipI~gDE~~~tn~~~~~~~i~~~a~d~i 360 (449)
T 3uj2_A 290 ASEELVAHWKSLCERY-----PIVSIEDGLDEED----WEGWQYMTRELGDKIQLVGDDLFVTNTERLNKGIKERCGNSI 360 (449)
T ss_dssp EHHHHHHHHHHHHHHS-----CEEEEESCSCTTC----HHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHTTCCSEE
T ss_pred CHHHHHHHHHHHHHhc-----CceEEECCCCcch----HHHHHHHHHHhCCCceEECCcceeCCHHHHHHHHHcCCCCEE
Confidence 5666666666666654 5888888865443 4455555554 3 455445433 3 59999999998888899
Q ss_pred ccccCCcccc-chhchHHHHHHcCCcEEe
Q 025789 88 QMEYSLWTRE-IEDDIIPLCRELGIGIVA 115 (248)
Q Consensus 88 q~~~~~~~~~-~~~~~~~~~~~~gi~v~~ 115 (248)
|+..+-.-.- ...++..+|+++|+.++.
T Consensus 361 ~iKv~~iGGiTea~kia~lA~~~Gi~~~v 389 (449)
T 3uj2_A 361 LIKLNQIGTVSETLEAIKMAHKAGYTAVV 389 (449)
T ss_dssp EECHHHHCSHHHHHHHHHHHHHTTCEEEE
T ss_pred EECccccCCHHHHHHHHHHHHHcCCeEEE
Confidence 8876543321 125788999999999554
No 66
>2ptz_A Enolase; lyase, glycolysis,His-TAG; 1.65A {Trypanosoma brucei} SCOP: c.1.11.1 d.54.1.1 PDB: 2ptx_A 2pty_A* 2ptw_A 2pu0_A 2pu1_A* 1oep_A
Probab=72.56 E-value=44 Score=29.19 Aligned_cols=95 Identities=12% Similarity=0.089 Sum_probs=65.0
Q ss_pred CHHHHHHHHHHHHhHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcC--cccEEeccC--CcHHHHHHHhccCCccee
Q 025789 12 SPEYVRKCCEASLKRLDVDYIDLYYQHRVDTSVSIEDTMGELKKLVEEG--KIKYIGLSE--ASADTIRRAHAVHPITAV 87 (248)
Q Consensus 12 s~~~i~~~~e~SL~rL~~d~iDl~~lH~~~~~~~~~~~~~~l~~l~~~G--~ir~iGvS~--~~~~~l~~~~~~~~~~~~ 87 (248)
+...+.+-+.+.|+.+ ++++|-.|-...+ ++.+.++.++- .|.-+|=-. +++..+.++++..-.+++
T Consensus 273 ~a~~~~~~~~~~l~~y-----~i~~iEdPl~~~D----~~g~~~l~~~~g~~ipI~gDe~~v~~~~~~~~~i~~~a~d~i 343 (432)
T 2ptz_A 273 TAEQLRETYCKWAHDY-----PIVSIEDPYDQDD----FAGFAGITEALKGKTQIVGDDLTVTNTERIKMAIEKKACNSL 343 (432)
T ss_dssp CHHHHHHHHHHHHHHS-----CEEEEECCSCTTC----HHHHHHHHHHTTTTSEEEESTTTTTCHHHHHHHHHTTCCSEE
T ss_pred CHHHHHHHHHHHHHhC-----CceEEECCCCcch----HHHHHHHHHhcCCCCeEEecCcccCCHHHHHHHHHcCCCCEE
Confidence 5555555555666654 6888988865443 55666666653 565555543 678999999998888999
Q ss_pred ccccCCccccc-hhchHHHHHHcCCcEEe
Q 025789 88 QMEYSLWTREI-EDDIIPLCRELGIGIVA 115 (248)
Q Consensus 88 q~~~~~~~~~~-~~~~~~~~~~~gi~v~~ 115 (248)
|+..+-.-.-- ..++..+|+++|+.++.
T Consensus 344 ~ik~~~~GGitea~~i~~lA~~~g~~v~~ 372 (432)
T 2ptz_A 344 LLKINQIGTISEAIASSKLCMENGWSVMV 372 (432)
T ss_dssp EECHHHHCCHHHHHHHHHHHHHTTCEEEE
T ss_pred EecccccCCHHHHHHHHHHHHHcCCeEEe
Confidence 88765432211 25788999999999965
No 67
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=72.43 E-value=32 Score=29.39 Aligned_cols=102 Identities=7% Similarity=0.035 Sum_probs=65.0
Q ss_pred CCHHHHHHHHHHHHhHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCcc-cEEeccCCcHHHHHHHhccCCcceecc
Q 025789 11 GSPEYVRKCCEASLKRLDVDYIDLYYQHRVDTSVSIEDTMGELKKLVEEGKI-KYIGLSEASADTIRRAHAVHPITAVQM 89 (248)
Q Consensus 11 ~s~~~i~~~~e~SL~rL~~d~iDl~~lH~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvS~~~~~~l~~~~~~~~~~~~q~ 89 (248)
++.+...+ +-+.|+.+++++|+ .|-... -++.+.++++.-.| -..|=+-++..++.++++....+++|+
T Consensus 205 ~~~~~A~~-~~~~l~~~~i~~iE-----qP~~~~----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~~ 274 (383)
T 3i4k_A 205 WDRRTALH-YLPILAEAGVELFE-----QPTPAD----DLETLREITRRTNVSVMADESVWTPAEALAVVKAQAADVIAL 274 (383)
T ss_dssp SCHHHHHH-HHHHHHHTTCCEEE-----SCSCTT----CHHHHHHHHHHHCCEEEESTTCSSHHHHHHHHHHTCCSEEEE
T ss_pred CCHHHHHH-HHHHHHhcCCCEEE-----CCCChh----hHHHHHHHHhhCCCCEEecCccCCHHHHHHHHHcCCCCEEEE
Confidence 34444433 34566666655543 443322 24556666655334 344556778899999998888899998
Q ss_pred ccCCcccc-chhchHHHHHHcCCcEEeecccccc
Q 025789 90 EYSLWTRE-IEDDIIPLCRELGIGIVAYSPLGRG 122 (248)
Q Consensus 90 ~~~~~~~~-~~~~~~~~~~~~gi~v~~~~~l~~G 122 (248)
..+..-.- ....+...|+++|+.++..+.+.++
T Consensus 275 k~~~~GGit~~~~ia~~A~~~gi~~~~~~~~es~ 308 (383)
T 3i4k_A 275 KTTKHGGLLESKKIAAIAEAGGLACHGATSLEGP 308 (383)
T ss_dssp CTTTTTSHHHHHHHHHHHHHTTCEEEECCSCCCH
T ss_pred cccccCCHHHHHHHHHHHHHcCCeEEeCCCCccH
Confidence 87654321 1266889999999999887766554
No 68
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=72.20 E-value=7 Score=33.32 Aligned_cols=102 Identities=13% Similarity=0.108 Sum_probs=65.7
Q ss_pred CCHHHHHHHHHHHHhHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCcccEE-eccCCcHHHHHHHhccCCcceecc
Q 025789 11 GSPEYVRKCCEASLKRLDVDYIDLYYQHRVDTSVSIEDTMGELKKLVEEGKIKYI-GLSEASADTIRRAHAVHPITAVQM 89 (248)
Q Consensus 11 ~s~~~i~~~~e~SL~rL~~d~iDl~~lH~~~~~~~~~~~~~~l~~l~~~G~ir~i-GvS~~~~~~l~~~~~~~~~~~~q~ 89 (248)
++.+...+-+ +.|+.+++++ +..|-+. +-++.+.+++++-.|--+ |=+-++...++++++....+++|+
T Consensus 199 ~~~~~a~~~~-~~l~~~~i~~-----iEqP~~~----~~~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~i 268 (370)
T 1nu5_A 199 WDEQTASIWI-PRLEEAGVEL-----VEQPVPR----ANFGALRRLTEQNGVAILADESLSSLSSAFELARDHAVDAFSL 268 (370)
T ss_dssp CCHHHHHHHH-HHHHHHTCCE-----EECCSCT----TCHHHHHHHHHHCSSEEEESTTCCSHHHHHHHHHTTCCSEEEE
T ss_pred CCHHHHHHHH-HHHHhcCcce-----EeCCCCc----ccHHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHhCCCCEEEE
Confidence 4555555433 3577777654 3444322 235666777766555433 345568899999998888889988
Q ss_pred ccCCcccc-chhchHHHHHHcCCcEEeecccccc
Q 025789 90 EYSLWTRE-IEDDIIPLCRELGIGIVAYSPLGRG 122 (248)
Q Consensus 90 ~~~~~~~~-~~~~~~~~~~~~gi~v~~~~~l~~G 122 (248)
..+..-.- ....+...|+++|+.++..+.+.++
T Consensus 269 k~~~~GGit~~~~i~~~A~~~g~~~~~~~~~es~ 302 (370)
T 1nu5_A 269 KLCNMGGIANTLKVAAVAEAAGISSYGGTMLDST 302 (370)
T ss_dssp CHHHHTSHHHHHHHHHHHHHHTCEEEECCSSCCH
T ss_pred chhhcCCHHHHHHHHHHHHHcCCcEEecCCcchH
Confidence 65543211 1257889999999999988766544
No 69
>3gd6_A Muconate cycloisomerase; structural genomics, NYSGXRC, target 9375A, divergent enolase, lyase, PSI-2; 1.60A {Oceanobacillus iheyensis HTE831} PDB: 2oqy_A 3es8_A 3es7_A 3fyy_A 3hpf_A*
Probab=72.17 E-value=9.5 Score=32.90 Aligned_cols=103 Identities=8% Similarity=-0.078 Sum_probs=69.4
Q ss_pred CCHHHHHHHHHHHHhHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCcccEEeccCCcHHHHHHHhccCCcceeccc
Q 025789 11 GSPEYVRKCCEASLKRLDVDYIDLYYQHRVDTSVSIEDTMGELKKLVEEGKIKYIGLSEASADTIRRAHAVHPITAVQME 90 (248)
Q Consensus 11 ~s~~~i~~~~e~SL~rL~~d~iDl~~lH~~~~~~~~~~~~~~l~~l~~~G~ir~iGvS~~~~~~l~~~~~~~~~~~~q~~ 90 (248)
++.+...+ +-+.|+.+++ ++.++..|-... -++.+.++++.-.|.- |=|.++...++++++...++++|+.
T Consensus 198 ~~~~~A~~-~~~~l~~~~i---~~~~iEqP~~~~----d~~~~~~l~~~~~iPI-dE~~~~~~~~~~~~~~~~~d~v~~k 268 (391)
T 3gd6_A 198 LNWKDAHR-AIKRLTKYDL---GLEMIESPAPRN----DFDGLYQLRLKTDYPI-SEHVWSFKQQQEMIKKDAIDIFNIS 268 (391)
T ss_dssp SCHHHHHH-HHHHHTTCCS---SCCEEECCSCTT----CHHHHHHHHHHCSSCE-EEECCCHHHHHHHHHHTCCSEEEEC
T ss_pred cCHHHHHH-HHHHHHhcCC---CcceecCCCChh----hHHHHHHHHHHcCCCc-CCCCCCHHHHHHHHHcCCCCEEEEC
Confidence 34444333 3345555554 235566664322 3667778887766665 8899999999999988888999887
Q ss_pred cCCcccc-chhchHHHHHHcCCcEEeecccccc
Q 025789 91 YSLWTRE-IEDDIIPLCRELGIGIVAYSPLGRG 122 (248)
Q Consensus 91 ~~~~~~~-~~~~~~~~~~~~gi~v~~~~~l~~G 122 (248)
.+-.-.- ....+..+|+++|+.++..+.+.++
T Consensus 269 ~~~~GGit~~~~ia~~A~~~gi~~~~~~~~es~ 301 (391)
T 3gd6_A 269 PVFIGGLTSAKKAAYAAEVASKDVVLGTTQELS 301 (391)
T ss_dssp HHHHTSHHHHHHHHHHHHHTTCEEEECCCCCCH
T ss_pred chhcCCHHHHHHHHHHHHHcCCEEEecCCCccH
Confidence 6543211 1257899999999999987766544
No 70
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=70.32 E-value=20 Score=30.83 Aligned_cols=98 Identities=9% Similarity=-0.027 Sum_probs=63.6
Q ss_pred CCHHHHHHHHHHHHhHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCcccEE-eccCCcHHHHHHHhccCCcceecc
Q 025789 11 GSPEYVRKCCEASLKRLDVDYIDLYYQHRVDTSVSIEDTMGELKKLVEEGKIKYI-GLSEASADTIRRAHAVHPITAVQM 89 (248)
Q Consensus 11 ~s~~~i~~~~e~SL~rL~~d~iDl~~lH~~~~~~~~~~~~~~l~~l~~~G~ir~i-GvS~~~~~~l~~~~~~~~~~~~q~ 89 (248)
++.+...+-++. |+.+++++|. .|-.. +-++.+.+++++-.|--+ |=+.++++.++++++....+++|+
T Consensus 218 ~~~~~a~~~~~~-l~~~~i~~iE-----~P~~~----~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~i 287 (393)
T 2og9_A 218 WDRPTAQRMCRI-FEPFNLVWIE-----EPLDA----YDHEGHAALALQFDTPIATGEMLTSAAEHGDLIRHRAADYLMP 287 (393)
T ss_dssp CCHHHHHHHHHH-HGGGCCSCEE-----CCSCT----TCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCCSEECC
T ss_pred CCHHHHHHHHHH-HHhhCCCEEE-----CCCCc----ccHHHHHHHHHhCCCCEEeCCCcCCHHHHHHHHHCCCCCEEee
Confidence 466666555544 7777776553 34221 235666777766555444 335568899999998888898888
Q ss_pred ccCCcccc-chhchHHHHHHcCCcEEeecc
Q 025789 90 EYSLWTRE-IEDDIIPLCRELGIGIVAYSP 118 (248)
Q Consensus 90 ~~~~~~~~-~~~~~~~~~~~~gi~v~~~~~ 118 (248)
..+-.-.- ....+..+|+++|+.++..+.
T Consensus 288 k~~~~GGit~~~~i~~~A~~~gi~~~~h~~ 317 (393)
T 2og9_A 288 DAPRVGGITPFLKIASLAEHAGLMLAPHFA 317 (393)
T ss_dssp CHHHHTSHHHHHHHHHHHHHTTCEECCCSC
T ss_pred CccccCCHHHHHHHHHHHHHcCCEEeccCc
Confidence 65542211 125789999999999986543
No 71
>3q45_A Mandelate racemase/muconate lactonizing enzyme FA possible chloromuconate cycloisomerase...; (beta/alpha)8-barrel; 3.00A {Cytophaga hutchinsonii} PDB: 3q4d_A
Probab=70.15 E-value=9.4 Score=32.62 Aligned_cols=74 Identities=14% Similarity=0.048 Sum_probs=53.1
Q ss_pred HHHHHHHHHHcCcc-cEEeccCCcHHHHHHHhccCCcceeccccCCcccc-chhchHHHHHHcCCcEEeecccccc
Q 025789 49 TMGELKKLVEEGKI-KYIGLSEASADTIRRAHAVHPITAVQMEYSLWTRE-IEDDIIPLCRELGIGIVAYSPLGRG 122 (248)
Q Consensus 49 ~~~~l~~l~~~G~i-r~iGvS~~~~~~l~~~~~~~~~~~~q~~~~~~~~~-~~~~~~~~~~~~gi~v~~~~~l~~G 122 (248)
-++.+.+++++-.| -..|=|-++...+.++++....+++|+..+..-.- ....+..+|+++|+.++..+.+.++
T Consensus 223 ~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~i~~~A~~~gi~~~~~~~~es~ 298 (368)
T 3q45_A 223 LYTALPKIRQACRIPIMADESCCNSFDAERLIQIQACDSFNLKLSKSAGITNALNIIRLAEQAHMPVQVGGFLESR 298 (368)
T ss_dssp GGGGHHHHHHTCSSCEEESTTCCSHHHHHHHHHTTCCSEEEECTTTTTSHHHHHHHHHHHHHTTCCEEECCSSCCH
T ss_pred HHHHHHHHHhhCCCCEEEcCCcCCHHHHHHHHHcCCCCeEEechhhcCCHHHHHHHHHHHHHcCCcEEecCccccH
Confidence 35566677766444 34455678899999999888899999887654321 1267889999999999987666544
No 72
>2y5s_A DHPS, dihydropteroate synthase; transferase, folate biosynthesis; HET: 78H; 1.95A {Burkholderia cenocepacia} PDB: 2y5j_A*
Probab=70.15 E-value=20 Score=29.78 Aligned_cols=148 Identities=12% Similarity=0.111 Sum_probs=79.8
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHhHcCCCcccEEEec-cCCCC-CCH----HHHHHHHHHHHHcCcccEEeccCCcHHH
Q 025789 1 MLDGVSIGVKGSPEYVRKCCEASLKRLDVDYIDLYYQH-RVDTS-VSI----EDTMGELKKLVEEGKIKYIGLSEASADT 74 (248)
Q Consensus 1 ~~~~~~~~~~~s~~~i~~~~e~SL~rL~~d~iDl~~lH-~~~~~-~~~----~~~~~~l~~l~~~G~ir~iGvS~~~~~~ 74 (248)
|.|+|.+ .+.+.+.+..+ .+..-|-|.||+=--- +|... .+. +.++..++.+++.+ --|.+-++.++.
T Consensus 36 Fsdgg~~---~~~~~a~~~a~-~~v~~GAdiIDIGgeSTrPga~~v~~~eE~~Rv~pvi~~l~~~~--vpiSIDT~~~~V 109 (294)
T 2y5s_A 36 FSDGGRF---LARDDALRRAE-RMIAEGADLLDIGGESTRPGAPPVPLDEELARVIPLVEALRPLN--VPLSIDTYKPAV 109 (294)
T ss_dssp -----------CTTHHHHHHH-HHHHTTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHGGGC--SCEEEECCCHHH
T ss_pred CCCCCCc---CCHHHHHHHHH-HHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHhhCC--CeEEEECCCHHH
Confidence 5566654 24455555443 4555788889987633 34321 222 33556666666553 247888999999
Q ss_pred HHHHhccCCcceeccccCCccccchhchHHHHHHcCCcEEeeccccccccccccccCCCCchhhhhcCCCCCchhhHHHH
Q 025789 75 IRRAHAVHPITAVQMEYSLWTREIEDDIIPLCRELGIGIVAYSPLGRGFFAGKAVVESLPSESILAMHPRFSGENLEKNK 154 (248)
Q Consensus 75 l~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~gi~v~~~~~l~~G~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (248)
++++++.+..-++ ..|... ..++++.++++|.+++.+.. +|.- .... ...|.|. .-..+..
T Consensus 110 a~aAl~aGa~iIN--dVsg~~---d~~m~~~~a~~~~~vVlmh~--~G~p------~tm~-----~~~~~y~-dv~~ev~ 170 (294)
T 2y5s_A 110 MRAALAAGADLIN--DIWGFR---QPGAIDAVRDGNSGLCAMHM--LGEP------QTMQ-----VGEPDYG-DVVTDVR 170 (294)
T ss_dssp HHHHHHHTCSEEE--ETTTTC---STTHHHHHSSSSCEEEEECC--CEET------TTTE-----ECCCCCS-SHHHHHH
T ss_pred HHHHHHcCCCEEE--ECCCCC---chHHHHHHHHhCCCEEEECC--CCCC------cccc-----ccCCccc-cHHHHHH
Confidence 9999887543232 223222 25789999999999998764 3320 0000 0112232 1223445
Q ss_pred HHHHHHHHHHHHhCCCHHH
Q 025789 155 LLYTRLETLAAKYGCTTPQ 173 (248)
Q Consensus 155 ~~~~~l~~ia~~~~~s~~q 173 (248)
..+....+.|.+.|+...+
T Consensus 171 ~~l~~~i~~a~~~Gi~~~~ 189 (294)
T 2y5s_A 171 DFLAARAQALRDAGVAAER 189 (294)
T ss_dssp HHHHHHHHHHHHTTCCGGG
T ss_pred HHHHHHHHHHHHcCCChhh
Confidence 5555666667777776443
No 73
>3dg3_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding; 1.60A {Mycobacterium smegmatis} PDB: 3dg6_A* 3dg7_A*
Probab=68.77 E-value=17 Score=31.00 Aligned_cols=91 Identities=13% Similarity=0.130 Sum_probs=61.2
Q ss_pred HHHhHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCccc-EEeccCCcHHHHHHHhccCCcceeccccCCccccc-h
Q 025789 22 ASLKRLDVDYIDLYYQHRVDTSVSIEDTMGELKKLVEEGKIK-YIGLSEASADTIRRAHAVHPITAVQMEYSLWTREI-E 99 (248)
Q Consensus 22 ~SL~rL~~d~iDl~~lH~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvS~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~-~ 99 (248)
+.|+.++++ ++..|-... -++.+.++++.-.|. ..|=|-++...+.+++.....+++|+...-. .-. .
T Consensus 206 ~~l~~~~i~-----~iEqP~~~~----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~~k~~~~-Git~~ 275 (367)
T 3dg3_A 206 REMADLDLL-----FAEELCPAD----DVLSRRRLVGQLDMPFIADESVPTPADVTREVLGGSATAISIKTART-GFTGS 275 (367)
T ss_dssp HHTTTSCCS-----CEESCSCTT----SHHHHHHHHHHCSSCEEECTTCSSHHHHHHHHHHTSCSEEEECHHHH-TTHHH
T ss_pred HHHHHhCCC-----EEECCCCcc----cHHHHHHHHHhCCCCEEecCCcCCHHHHHHHHHcCCCCEEEeehhhh-hHHHH
Confidence 344555444 445554322 356667777765554 4455677899999999888889999876554 211 2
Q ss_pred hchHHHHHHcCCcEEeecccccc
Q 025789 100 DDIIPLCRELGIGIVAYSPLGRG 122 (248)
Q Consensus 100 ~~~~~~~~~~gi~v~~~~~l~~G 122 (248)
..+..+|+++|+.++..+.+.++
T Consensus 276 ~~ia~~A~~~gi~~~~~~~~es~ 298 (367)
T 3dg3_A 276 TRVHHLAEGLGLDMVMGNQIDGQ 298 (367)
T ss_dssp HHHHHHHHHHTCEEEECCSSCCH
T ss_pred HHHHHHHHHcCCeEEECCcCCcH
Confidence 56889999999999987666554
No 74
>2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A*
Probab=68.50 E-value=18 Score=31.28 Aligned_cols=69 Identities=10% Similarity=-0.013 Sum_probs=47.2
Q ss_pred HHHHHHHHHcCcccEEe-ccCCcHHHHHHHhccCCcceeccccCCcccc-chhchHHHHHHcCCcEEeecc
Q 025789 50 MGELKKLVEEGKIKYIG-LSEASADTIRRAHAVHPITAVQMEYSLWTRE-IEDDIIPLCRELGIGIVAYSP 118 (248)
Q Consensus 50 ~~~l~~l~~~G~ir~iG-vS~~~~~~l~~~~~~~~~~~~q~~~~~~~~~-~~~~~~~~~~~~gi~v~~~~~ 118 (248)
++.+.+++++-.|--++ =+-++...++++++....+++|+..+-.-.- ....+..+|+++|+.++..+.
T Consensus 258 ~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~ia~~A~~~gi~~~~h~~ 328 (410)
T 2gl5_A 258 SDNMQKVSRSTTIPIATGERSYTRWGYRELLEKQSIAVAQPDLCLCGGITEGKKICDYANIYDTTVQVHVC 328 (410)
T ss_dssp HHHHHHHHHHCSSCEEECTTCCTTHHHHHHHHTTCCSEECCCTTTTTHHHHHHHHHHHHHTTTCEECCCCC
T ss_pred HHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcCCCCEEecCccccCCHHHHHHHHHHHHHcCCeEeecCC
Confidence 55566666654454333 3445778888888888888888876653221 125788999999999988765
No 75
>2qde_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-II, NYSGXRC, enolase, structural genomics, protei structure initiative, PSI-2; 1.93A {Azoarcus SP}
Probab=68.23 E-value=18 Score=31.09 Aligned_cols=102 Identities=8% Similarity=0.029 Sum_probs=65.2
Q ss_pred CCHHHHHHHHHHHHhHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCcccEE-eccCCcHHHHHHHhccCCcceecc
Q 025789 11 GSPEYVRKCCEASLKRLDVDYIDLYYQHRVDTSVSIEDTMGELKKLVEEGKIKYI-GLSEASADTIRRAHAVHPITAVQM 89 (248)
Q Consensus 11 ~s~~~i~~~~e~SL~rL~~d~iDl~~lH~~~~~~~~~~~~~~l~~l~~~G~ir~i-GvS~~~~~~l~~~~~~~~~~~~q~ 89 (248)
++.+...+-+ +.|+.+++++| ..|-.. +-++.+.+++++-.|--. |=+.++...++++++....+++|+
T Consensus 200 ~~~~~a~~~~-~~l~~~~i~~i-----EqP~~~----~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~i 269 (397)
T 2qde_A 200 WTYDQALTTI-RALEKYNLSKI-----EQPLPA----WDLDGMARLRGKVATPIYADESAQELHDLLAIINKGAADGLMI 269 (397)
T ss_dssp CCHHHHHHHH-HHHGGGCCSCE-----ECCSCT----TCHHHHHHHHTTCSSCEEESTTCCSHHHHHHHHHHTCCSEEEE
T ss_pred CCHHHHHHHH-HHHHhCCCCEE-----ECCCCh----hhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEE
Confidence 4555555433 35677766654 344221 236667777766555433 335567888999888888888888
Q ss_pred ccCCcccc-chhchHHHHHHcCCcEEeecccccc
Q 025789 90 EYSLWTRE-IEDDIIPLCRELGIGIVAYSPLGRG 122 (248)
Q Consensus 90 ~~~~~~~~-~~~~~~~~~~~~gi~v~~~~~l~~G 122 (248)
..+-.-.- ....+...|+++|+.++..+-+.+|
T Consensus 270 k~~~~GGit~~~~i~~~A~~~g~~~~~~~~~es~ 303 (397)
T 2qde_A 270 KTQKAGGLLKAQRWLTLARLANLPVICGCMVGSG 303 (397)
T ss_dssp CHHHHTSHHHHHHHHHHHHHHTCCEEECCCSCCH
T ss_pred eccccCCHHHHHHHHHHHHHcCCeEEEecCcccH
Confidence 65543211 1256889999999999998666544
No 76
>3bjs_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI-2, protein struc initiative; 2.70A {Polaromonas SP}
Probab=67.77 E-value=34 Score=29.73 Aligned_cols=97 Identities=9% Similarity=0.046 Sum_probs=63.7
Q ss_pred CCCHHHHHHHHHHHHhHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCc-ccEE-eccCCcHHHHHHHhccCCccee
Q 025789 10 KGSPEYVRKCCEASLKRLDVDYIDLYYQHRVDTSVSIEDTMGELKKLVEEGK-IKYI-GLSEASADTIRRAHAVHPITAV 87 (248)
Q Consensus 10 ~~s~~~i~~~~e~SL~rL~~d~iDl~~lH~~~~~~~~~~~~~~l~~l~~~G~-ir~i-GvS~~~~~~l~~~~~~~~~~~~ 87 (248)
.++.+...+-++. |+.+++++| ..|-.. +.++.+.+++++-. |--+ |=+-++...++++++....+++
T Consensus 239 ~~~~~eai~~~~~-L~~~~i~~i-----EqP~~~----~d~~~~~~l~~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v 308 (428)
T 3bjs_A 239 AYTMADARRVLPV-LAEIQAGWL-----EEPFAC----NDFASYREVAKITPLVPIAAGENHYTRFEFGQMLDAGAVQVW 308 (428)
T ss_dssp CCCHHHHHHHHHH-HHHTTCSCE-----ECCSCT----TCHHHHHHHTTTCSSSCEEECTTCCSHHHHHHHHTTCCEEEE
T ss_pred CCCHHHHHHHHHH-HHhcCCCEE-----ECCCCc----cCHHHHHHHHHhCCCCcEEcCCCcCCHHHHHHHHHhCCCCEE
Confidence 3456665554443 777776654 344221 23666667766543 4333 4455688999999998889999
Q ss_pred ccccCCcccc-chhchHHHHHHcCCcEEee
Q 025789 88 QMEYSLWTRE-IEDDIIPLCRELGIGIVAY 116 (248)
Q Consensus 88 q~~~~~~~~~-~~~~~~~~~~~~gi~v~~~ 116 (248)
|+..+-.-.- ....+..+|+++|+.++..
T Consensus 309 ~ik~~~~GGitea~~ia~~A~~~gi~~~~~ 338 (428)
T 3bjs_A 309 QPDLSKCGGITEGIRIAAMASAYRIPINAH 338 (428)
T ss_dssp CCBTTTSSCHHHHHHHHHHHHHTTCCBCCB
T ss_pred EeCccccCCHHHHHHHHHHHHHcCCeEEec
Confidence 9987664321 1257889999999998887
No 77
>2zad_A Muconate cycloisomerase; muconate lactonizing enzyme (MLE), TM0006, struct genomics, NPPSFA; HET: 1PE; 1.60A {Thermotoga maritima} PDB: 3deq_A 3der_A* 3des_A* 3dfy_A
Probab=67.30 E-value=13 Score=31.22 Aligned_cols=103 Identities=8% Similarity=0.002 Sum_probs=65.4
Q ss_pred CCHHHHHHHHHHHHhHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCcccEE-eccCCcHHHHHHHhccCCcceecc
Q 025789 11 GSPEYVRKCCEASLKRLDVDYIDLYYQHRVDTSVSIEDTMGELKKLVEEGKIKYI-GLSEASADTIRRAHAVHPITAVQM 89 (248)
Q Consensus 11 ~s~~~i~~~~e~SL~rL~~d~iDl~~lH~~~~~~~~~~~~~~l~~l~~~G~ir~i-GvS~~~~~~l~~~~~~~~~~~~q~ 89 (248)
++.+...+-+ +.|+.++++ +.++..|-+. +-++.+.+++++-.|--. |=+-++...++++++....+++|+
T Consensus 193 ~~~~~a~~~~-~~l~~~~i~---~~~iE~P~~~----~~~~~~~~l~~~~~ipia~dE~~~~~~~~~~~i~~~~~d~v~i 264 (345)
T 2zad_A 193 YTQKEAVEFA-RAVYQKGID---IAVYEQPVRR----EDIEGLKFVRFHSPFPVAADESARTKFDVMRLVKEEAVDYVNI 264 (345)
T ss_dssp SCHHHHHHHH-HHHHHTTCC---CSEEECCSCT----TCHHHHHHHHHHSSSCEEESTTCCSHHHHHHHHHHTCCSEEEE
T ss_pred CCHHHHHHHH-HHHHhcCCC---eeeeeCCCCc----ccHHHHHHHHHhCCCCEEEeCCcCCHHHHHHHHHhCCCCEEEE
Confidence 4566655544 347777665 1134455322 235666677766555433 345568889999988888888888
Q ss_pred ccCCcccc-chhchHHHHHHcCCcEEeecccccc
Q 025789 90 EYSLWTRE-IEDDIIPLCRELGIGIVAYSPLGRG 122 (248)
Q Consensus 90 ~~~~~~~~-~~~~~~~~~~~~gi~v~~~~~l~~G 122 (248)
..+- -.- ....+...|+++|+.++..+.+.++
T Consensus 265 k~~~-GGit~~~~i~~~A~~~g~~~~~~~~~es~ 297 (345)
T 2zad_A 265 KLMK-SGISDALAIVEIAESSGLKLMIGCMGESS 297 (345)
T ss_dssp CHHH-HHHHHHHHHHHHHHTTTCEEEECCSSCCH
T ss_pred eccc-ccHHHHHHHHHHHHHcCCeEEEecCcccH
Confidence 5543 110 1256889999999999988765443
No 78
>1nsj_A PRAI, phosphoribosyl anthranilate isomerase; thermostability; 2.00A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1lbm_A 1dl3_A
Probab=67.19 E-value=15 Score=28.60 Aligned_cols=65 Identities=14% Similarity=0.176 Sum_probs=42.8
Q ss_pred HhHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCcccEEecc-CCcHHHHHHHhccCCcceeccc
Q 025789 24 LKRLDVDYIDLYYQHRVDTSVSIEDTMGELKKLVEEGKIKYIGLS-EASADTIRRAHAVHPITAVQME 90 (248)
Q Consensus 24 L~rL~~d~iDl~~lH~~~~~~~~~~~~~~l~~l~~~G~ir~iGvS-~~~~~~l~~~~~~~~~~~~q~~ 90 (248)
..++|.||+=+++.-........+.+ ..+.... ...+..+||- |.+++.+.++.....++++|+.
T Consensus 18 a~~~GaD~iGfif~~~SpR~V~~~~a-~~i~~~~-~~~~~~VgVfvn~~~~~i~~~~~~~~ld~vQLH 83 (205)
T 1nsj_A 18 SVESGADAVGFVFYPKSKRYISPEDA-RRISVEL-PPFVFRVGVFVNEEPEKILDVASYVQLNAVQLH 83 (205)
T ss_dssp HHHHTCSEEEEECCTTCTTBCCHHHH-HHHHHHS-CSSSEEEEEESSCCHHHHHHHHHHHTCSEEEEC
T ss_pred HHHcCCCEEEEEecCCCCCcCCHHHH-HHHHHhC-CCCCCEEEEEeCCCHHHHHHHHHhhCCCEEEEC
Confidence 45789999998853211222344333 3332221 2468899995 6688999999888889999986
No 79
>2pp0_A L-talarate/galactarate dehydratase; enolase superfamily, LYA; 2.20A {Salmonella typhimurium} PDB: 2pp1_A* 2pp3_A*
Probab=67.11 E-value=24 Score=30.31 Aligned_cols=97 Identities=10% Similarity=-0.046 Sum_probs=62.8
Q ss_pred CCHHHHHHHHHHHHhHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCcccEE-eccCCcHHHHHHHhccCCcceecc
Q 025789 11 GSPEYVRKCCEASLKRLDVDYIDLYYQHRVDTSVSIEDTMGELKKLVEEGKIKYI-GLSEASADTIRRAHAVHPITAVQM 89 (248)
Q Consensus 11 ~s~~~i~~~~e~SL~rL~~d~iDl~~lH~~~~~~~~~~~~~~l~~l~~~G~ir~i-GvS~~~~~~l~~~~~~~~~~~~q~ 89 (248)
++.+...+-++. |+.+++++| ..|-.. +-++.+.+++++-.|--+ |=+.++...++++++....+++|+
T Consensus 231 ~~~~~ai~~~~~-l~~~~i~~i-----EqP~~~----~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~i 300 (398)
T 2pp0_A 231 WDRETAIRMGRK-MEQFNLIWI-----EEPLDA----YDIEGHAQLAAALDTPIATGEMLTSFREHEQLILGNASDFVQP 300 (398)
T ss_dssp SCHHHHHHHHHH-HGGGTCSCE-----ECCSCT----TCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCCSEECC
T ss_pred CCHHHHHHHHHH-HHHcCCcee-----eCCCCh----hhHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcCCCCEEEe
Confidence 456665554443 777776654 344322 236666777776555443 335568899999998888888888
Q ss_pred ccCCcccc-chhchHHHHHHcCCcEEeec
Q 025789 90 EYSLWTRE-IEDDIIPLCRELGIGIVAYS 117 (248)
Q Consensus 90 ~~~~~~~~-~~~~~~~~~~~~gi~v~~~~ 117 (248)
..+-.-.- ....+..+|+++|+.++.++
T Consensus 301 k~~~~GGite~~~i~~~A~~~gi~~~~h~ 329 (398)
T 2pp0_A 301 DAPRVGGISPFLKIMDLAAKHGRKLAPHF 329 (398)
T ss_dssp CHHHHTSHHHHHHHHHHHHHTTCEECCCS
T ss_pred CccccCCHHHHHHHHHHHHHcCCeEeecC
Confidence 65542211 12578999999999998654
No 80
>3p3b_A Mandelate racemase/muconate lactonizing protein; enolase superfamily fold, galacturonate dehydratase, D-tartr galacturonate, lyase; HET: TAR; 1.65A {Geobacillus SP} PDB: 3ops_A* 3n4f_A* 3qpe_A*
Probab=67.04 E-value=7.2 Score=33.64 Aligned_cols=79 Identities=8% Similarity=-0.026 Sum_probs=53.4
Q ss_pred ccEEEeccCCCCCCHHHHHHHHHHHHHc-----CcccEEeccCCcHHHHHHHhccCCcceeccccCCccccc-hhchHHH
Q 025789 32 IDLYYQHRVDTSVSIEDTMGELKKLVEE-----GKIKYIGLSEASADTIRRAHAVHPITAVQMEYSLWTREI-EDDIIPL 105 (248)
Q Consensus 32 iDl~~lH~~~~~~~~~~~~~~l~~l~~~-----G~ir~iGvS~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~-~~~~~~~ 105 (248)
.++.++..|-+ +.++.+.++++. -.|--.+--.++...++++++....+++|+..+-. .-. ...+..+
T Consensus 227 ~~i~~iE~P~~-----~d~~~~~~l~~~l~~~g~~iPIa~dE~~~~~~~~~~i~~~~~d~v~ik~~~~-Git~~~~i~~~ 300 (392)
T 3p3b_A 227 VNLYWLEEAFH-----EDEALYEDLKEWLGQRGQNVLIADGEGLASPHLIEWATRGRVDVLQYDIIWP-GFTHWMELGEK 300 (392)
T ss_dssp SCEEEEECSSS-----CCHHHHHHHHHHHHHHTCCCEEEECCSSCCTTHHHHHHTTSCCEECCBTTTB-CHHHHHHHHHH
T ss_pred cCCCEEecCCc-----ccHHHHHHHHHhhccCCCCccEEecCCCCHHHHHHHHHcCCCCEEEeCcccc-CHHHHHHHHHH
Confidence 35556666644 235556666665 34433322255678888888888899999987765 321 2578899
Q ss_pred HHHcCCcEEee
Q 025789 106 CRELGIGIVAY 116 (248)
Q Consensus 106 ~~~~gi~v~~~ 116 (248)
|+++|+.++..
T Consensus 301 A~~~gi~~~~h 311 (392)
T 3p3b_A 301 LDAHGLRSAPH 311 (392)
T ss_dssp HHHTTCEECCB
T ss_pred HHHcCCEEEec
Confidence 99999999886
No 81
>1sjd_A N-acylamino acid racemase; lyase, isomerase; HET: NPG; 1.87A {Amycolatopsis SP} SCOP: c.1.11.2 d.54.1.1 PDB: 1sja_A* 1sjb_A* 1sjc_A*
Probab=66.87 E-value=9.2 Score=32.53 Aligned_cols=101 Identities=12% Similarity=0.022 Sum_probs=63.9
Q ss_pred CCHHHHHHHHHHHHhHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCcccE-EeccCCcHHHHHHHhccCCcceecc
Q 025789 11 GSPEYVRKCCEASLKRLDVDYIDLYYQHRVDTSVSIEDTMGELKKLVEEGKIKY-IGLSEASADTIRRAHAVHPITAVQM 89 (248)
Q Consensus 11 ~s~~~i~~~~e~SL~rL~~d~iDl~~lH~~~~~~~~~~~~~~l~~l~~~G~ir~-iGvS~~~~~~l~~~~~~~~~~~~q~ 89 (248)
++.+. .+-+ +.|+.+++++ +..|-+. +-++.+.+++++-.|-- .|=+-++.+.++++++....+++|+
T Consensus 194 ~~~~~-~~~~-~~l~~~~i~~-----iE~P~~~----~~~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~i 262 (368)
T 1sjd_A 194 YTLGD-APQL-ARLDPFGLLL-----IEQPLEE----EDVLGHAELARRIQTPICLDESIVSARAAADAIKLGAVQIVNI 262 (368)
T ss_dssp CCGGG-HHHH-HTTGGGCCSE-----EECCSCT----TCHHHHHHHHTTCSSCEEESTTCCSHHHHHHHHHTTCCSEEEE
T ss_pred CCHHH-HHHH-HHHHhcCCCe-----EeCCCCh----hhHHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHcCCCCEEEe
Confidence 34444 3333 3366666654 4455322 24667777777655533 3445678999999999888999999
Q ss_pred ccCCcccc-chhchHHHHHHcCCcEEeecccccc
Q 025789 90 EYSLWTRE-IEDDIIPLCRELGIGIVAYSPLGRG 122 (248)
Q Consensus 90 ~~~~~~~~-~~~~~~~~~~~~gi~v~~~~~l~~G 122 (248)
..+..-.- ....+..+|+++|+.++.-+-+.+|
T Consensus 263 k~~~~GGit~~~~i~~~A~~~g~~~~~~~~~es~ 296 (368)
T 1sjd_A 263 KPGRVGGYLEARRVHDVCAAHGIPVWCGGMIETG 296 (368)
T ss_dssp CTTTTTSHHHHHHHHHHHHHTTCCEEECCCCCCH
T ss_pred cccccCCHHHHHHHHHHHHHcCCcEEeCCccccH
Confidence 77654321 1257889999999996654444433
No 82
>1chr_A Chloromuconate cycloisomerase; 3.00A {Ralstonia eutropha} PDB: 2chr_A
Probab=66.66 E-value=30 Score=29.40 Aligned_cols=86 Identities=8% Similarity=0.043 Sum_probs=59.5
Q ss_pred cEEEeccCCCCCCHHHHHHHHHHHHHcCcc-cEEeccCCcHHHHHHHhccCCcceeccccCCcccc-chhchHHHHHHcC
Q 025789 33 DLYYQHRVDTSVSIEDTMGELKKLVEEGKI-KYIGLSEASADTIRRAHAVHPITAVQMEYSLWTRE-IEDDIIPLCRELG 110 (248)
Q Consensus 33 Dl~~lH~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvS~~~~~~l~~~~~~~~~~~~q~~~~~~~~~-~~~~~~~~~~~~g 110 (248)
++.++..|-... -++.+.+++++-.| -..|=|-++...+.++++....+++|+..+..-.- ....+...|+++|
T Consensus 215 ~i~~iEqP~~~~----~~~~~~~l~~~~~iPia~dE~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~i~~~A~~~g 290 (370)
T 1chr_A 215 GVELIEQPVGRE----NTQALRRLSDNNRVAIMADESLSTLASAFDLARDRSVDVFSLKLCNMGGVSATQKIAAVAEASG 290 (370)
T ss_dssp TEEEEECCSCTT----CHHHHHHHHHHSCSEEEESSSCCSHHHHHHHHTTTSCSEEEECTTTSCSHHHHHHHHHHHHHHT
T ss_pred CCCEEECCCCcc----cHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHcCCCCEEEECccccCCHHHHHHHHHHHHHcC
Confidence 445555554322 35666777776444 34455678899999999988899999977654321 1267889999999
Q ss_pred CcEEeecccccc
Q 025789 111 IGIVAYSPLGRG 122 (248)
Q Consensus 111 i~v~~~~~l~~G 122 (248)
+.++..+.+.++
T Consensus 291 ~~~~~~~~~es~ 302 (370)
T 1chr_A 291 IASYGGTMLDST 302 (370)
T ss_dssp CEEEECCSCCTT
T ss_pred CeEEecCCCccH
Confidence 999987766654
No 83
>1r0m_A N-acylamino acid racemase; isomerase; 1.30A {Deinococcus radiodurans} SCOP: c.1.11.2 d.54.1.1 PDB: 1xpy_A* 1xs2_A 2ggj_A 2ggi_A 2ggh_A* 2ggg_A* 2fkp_A
Probab=66.48 E-value=8.3 Score=32.93 Aligned_cols=90 Identities=18% Similarity=0.186 Sum_probs=58.8
Q ss_pred HhHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCccc-EEeccCCcHHHHHHHhccCCcceeccccCCcccc-chhc
Q 025789 24 LKRLDVDYIDLYYQHRVDTSVSIEDTMGELKKLVEEGKIK-YIGLSEASADTIRRAHAVHPITAVQMEYSLWTRE-IEDD 101 (248)
Q Consensus 24 L~rL~~d~iDl~~lH~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvS~~~~~~l~~~~~~~~~~~~q~~~~~~~~~-~~~~ 101 (248)
|+.+++++| ..|-+. +-++.+.+++++-.|- ..|=+-++...++++++....+++|+..+..-.- ....
T Consensus 211 l~~~~i~~i-----EqP~~~----~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~ 281 (375)
T 1r0m_A 211 LDEYDLTYI-----EQPLAW----DDLVDHAELARRIRTPLCLDESVASASDARKALALGAGGVINLKVARVGGHAESRR 281 (375)
T ss_dssp TGGGCCSCE-----ECCSCT----TCSHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHHTSCSEEEECTTTTTSHHHHHH
T ss_pred HHhCCCcEE-----ECCCCc----ccHHHHHHHHHhCCCCEEecCccCCHHHHHHHHHhCCCCEEEECcchhcCHHHHHH
Confidence 666665554 455332 2355666777664443 4445667899999999888899999977654321 1257
Q ss_pred hHHHHHHcCCcEEeecccccc
Q 025789 102 IIPLCRELGIGIVAYSPLGRG 122 (248)
Q Consensus 102 ~~~~~~~~gi~v~~~~~l~~G 122 (248)
+...|+++|+.++.-+-+.+|
T Consensus 282 i~~~A~~~g~~~~~~~~~es~ 302 (375)
T 1r0m_A 282 VHDVAQSFGAPVWCGGMLESG 302 (375)
T ss_dssp HHHHHHHTTCCEEECCCCCCH
T ss_pred HHHHHHHcCCcEEecCccccH
Confidence 889999999996654444433
No 84
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=66.14 E-value=13 Score=31.45 Aligned_cols=107 Identities=15% Similarity=0.209 Sum_probs=59.6
Q ss_pred CCCCCHHHHHHHHHHHHhHcCCCcccEE-----EeccCCCCCCHHHHHHHHHHHHHc-CcccEEec--cCC-cHHHHHHH
Q 025789 8 GVKGSPEYVRKCCEASLKRLDVDYIDLY-----YQHRVDTSVSIEDTMGELKKLVEE-GKIKYIGL--SEA-SADTIRRA 78 (248)
Q Consensus 8 ~~~~s~~~i~~~~e~SL~rL~~d~iDl~-----~lH~~~~~~~~~~~~~~l~~l~~~-G~ir~iGv--S~~-~~~~l~~~ 78 (248)
...++.+...+ +-+.|.++|+|+|.+= ---.|.........++.++++++. ..++...+ -+. ....++.+
T Consensus 24 ~~~~~~e~k~~-i~~~L~~~Gvd~IEvG~~~g~p~ssp~~g~~~~~~~e~l~~i~~~~~~~~i~~l~~p~~~~~~~i~~a 102 (345)
T 1nvm_A 24 RHQYTLDDVRA-IARALDKAKVDSIEVAHGDGLQGSSFNYGFGRHTDLEYIEAVAGEISHAQIATLLLPGIGSVHDLKNA 102 (345)
T ss_dssp TTCCCHHHHHH-HHHHHHHHTCSEEECSCTTSTTCCBTTTBCCSSCHHHHHHHHHTTCSSSEEEEEECBTTBCHHHHHHH
T ss_pred CCCCCHHHHHH-HHHHHHHcCCCEEEEecCCCCCCCCCcccCCCCCHHHHHHHHHhhCCCCEEEEEecCCcccHHHHHHH
Confidence 45567776665 4556788999888883 222222111223355666666654 23454444 222 35667766
Q ss_pred hccCCcceeccccCCccccchhchHHHHHHcCCcEEee
Q 025789 79 HAVHPITAVQMEYSLWTREIEDDIIPLCRELGIGIVAY 116 (248)
Q Consensus 79 ~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~gi~v~~~ 116 (248)
.+. .++.+.+..++-+.....+.+++|+++|+.+...
T Consensus 103 ~~a-Gvd~v~I~~~~s~~~~~~~~i~~ak~~G~~v~~~ 139 (345)
T 1nvm_A 103 YQA-GARVVRVATHCTEADVSKQHIEYARNLGMDTVGF 139 (345)
T ss_dssp HHH-TCCEEEEEEETTCGGGGHHHHHHHHHHTCEEEEE
T ss_pred HhC-CcCEEEEEEeccHHHHHHHHHHHHHHCCCEEEEE
Confidence 654 3344444332221122367889999999987765
No 85
>2qq6_A Mandelate racemase/muconate lactonizing enzyme- like protein; enolase, Mg ION, PSI-2, NYSGXRC, structural genomics; 2.90A {Rubrobacter xylanophilus dsm 9941}
Probab=65.08 E-value=17 Score=31.37 Aligned_cols=70 Identities=11% Similarity=-0.018 Sum_probs=46.3
Q ss_pred HHHHHHHHHcCcccEE-eccCCcHHHHHHHhccCCcceeccccCCcccc-chhchHHHHHHcCCcEEeeccc
Q 025789 50 MGELKKLVEEGKIKYI-GLSEASADTIRRAHAVHPITAVQMEYSLWTRE-IEDDIIPLCRELGIGIVAYSPL 119 (248)
Q Consensus 50 ~~~l~~l~~~G~ir~i-GvS~~~~~~l~~~~~~~~~~~~q~~~~~~~~~-~~~~~~~~~~~~gi~v~~~~~l 119 (248)
++.+.+++++-.|--+ |=+.++...++++++....+++|+..+-.-.- ....+..+|+++|+.++..+..
T Consensus 250 ~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGite~~~ia~~A~~~g~~~~~h~~~ 321 (410)
T 2qq6_A 250 LDALAEVRRSTSTPICAGENVYTRFDFRELFAKRAVDYVMPDVAKCGGLAEAKRIANLAELDYIPFAPHNVS 321 (410)
T ss_dssp HHHHHHHHTTCSSCEEECTTCCSHHHHHHHHHTTCCSEECCBHHHHTHHHHHHHHHHHHHTTTCCBCCBCCS
T ss_pred HHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHcCCCCEEecCccccCCHHHHHHHHHHHHHcCCeEeecCCC
Confidence 5566666665444333 33455788888888888888888865542211 1256789999999999887663
No 86
>2p0o_A Hypothetical protein DUF871; structural genomics, TIM barrel, PF05 2, protein structure initiative, midwest center for structu genomics; 2.15A {Enterococcus faecalis}
Probab=64.68 E-value=67 Score=27.51 Aligned_cols=147 Identities=14% Similarity=0.121 Sum_probs=85.5
Q ss_pred HHHhHcCCCcccEEEeccC-------CCCCCHHHHHHHHHHHHHcCcccEEeccCCcHHHHHHHhccC-CcceeccccCC
Q 025789 22 ASLKRLDVDYIDLYYQHRV-------DTSVSIEDTMGELKKLVEEGKIKYIGLSEASADTIRRAHAVH-PITAVQMEYSL 93 (248)
Q Consensus 22 ~SL~rL~~d~iDl~~lH~~-------~~~~~~~~~~~~l~~l~~~G~ir~iGvS~~~~~~l~~~~~~~-~~~~~q~~~~~ 93 (248)
++|+.||.+|=|+-.+|.. |.....+++.. +-.+ .--.+=.|+.+.+.+..++... .++-+..-.|.
T Consensus 73 ~~l~~Lg~s~~dl~~~~~lGi~glRLD~Gf~~~eia~----ls~n-lkIeLNASti~~~~l~~l~~~~~n~~~l~a~HNF 147 (372)
T 2p0o_A 73 EALKRAGFSFDELEPLIELGVTGLRMDYGITIEQMAH----ASHK-IDIGLNASTITLEEVAELKAHQADFSRLEAWHNY 147 (372)
T ss_dssp HHHHTTTCBTTBCHHHHHHTCCEEEECSSCCHHHHHH----HHTT-SEEEEETTTCCHHHHHHHHHTTCCGGGEEEECCC
T ss_pred HHHHHcCCCHHHHHHHHHcCCCEEEEcCCCCHHHHHH----HhcC-CEEEEECccCCHHHHHHHHHcCCChHHeEEeecc
Confidence 4678888888787777754 33343433332 3223 3345566888889999988763 45555555666
Q ss_pred ccccch-------hchHHHHHHcCCcEEeeccccccccccccccCCCCchhhhhcCCCCCchhhHHHHHHHHHHHHHHHH
Q 025789 94 WTREIE-------DDIIPLCRELGIGIVAYSPLGRGFFAGKAVVESLPSESILAMHPRFSGENLEKNKLLYTRLETLAAK 166 (248)
Q Consensus 94 ~~~~~~-------~~~~~~~~~~gi~v~~~~~l~~G~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ia~~ 166 (248)
+-+... .+.-.+.+++|+.+.|+-|=..+ ..|+ ....+|.-. ..
T Consensus 148 YPr~~TGLs~~~f~~~n~~~k~~Gi~t~AFI~g~~~-~rGP-l~eGLPTLE---------------------------~H 198 (372)
T 2p0o_A 148 YPRPETGIGTTFFNEKNRWLKELGLQVFTFVPGDGQ-TRGP-IFAGLPTLE---------------------------KH 198 (372)
T ss_dssp CCSTTCSBCHHHHHHHHHHHHHTTCEEEEEECCSSS-CCTT-TCSCCCSBG---------------------------GG
T ss_pred CCCCCCCCCHHHHHHHHHHHHHCCCcEEEEecCCCc-cCCC-ccCCCCchH---------------------------Hh
Confidence 554321 34456778889999998776532 2222 011122210 01
Q ss_pred hCCCHHHHHHHHHHhCCCCceeecCCC--ChHhHHHhhc
Q 025789 167 YGCTTPQLALAWLLHQGDDIVPIPGTT--KITNLDNNIG 203 (248)
Q Consensus 167 ~~~s~~q~al~~~l~~~~v~~~i~G~~--~~~~l~enl~ 203 (248)
.++++. ++...+...+.|.-|++|-. +.+.+++...
T Consensus 199 R~~~~~-~~a~~L~~~~~iD~V~IGd~~~S~~el~~l~~ 236 (372)
T 2p0o_A 199 RGQNPF-AAAVGLMADPYVDAVYIGDPTISERTMAQFGY 236 (372)
T ss_dssp TTSCHH-HHHHHHHHSTTCCEEEECSSCCCHHHHHHHHH
T ss_pred CCCCHH-HHHHHHHhcCCCCEEEECCCCCCHHHHHHHHH
Confidence 234443 56667778878999999874 4455554433
No 87
>1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A
Probab=64.38 E-value=9.7 Score=32.37 Aligned_cols=103 Identities=9% Similarity=0.050 Sum_probs=63.7
Q ss_pred CCHHHHHHHHHHHHhHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCcccE-EeccCCcHHHHHHHhccCCcceecc
Q 025789 11 GSPEYVRKCCEASLKRLDVDYIDLYYQHRVDTSVSIEDTMGELKKLVEEGKIKY-IGLSEASADTIRRAHAVHPITAVQM 89 (248)
Q Consensus 11 ~s~~~i~~~~e~SL~rL~~d~iDl~~lH~~~~~~~~~~~~~~l~~l~~~G~ir~-iGvS~~~~~~l~~~~~~~~~~~~q~ 89 (248)
++.+...+-++. |+..+ .++.++..|-+. +-++.+.+++++-.|-- .|=+.++...+.++++....+++|+
T Consensus 196 ~~~~~a~~~~~~-l~~~~---~~i~~iEqP~~~----~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~i 267 (366)
T 1tkk_A 196 WRPKEAVTAIRK-MEDAG---LGIELVEQPVHK----DDLAGLKKVTDATDTPIMADESVFTPRQAFEVLQTRSADLINI 267 (366)
T ss_dssp SCHHHHHHHHHH-HHHTT---CCEEEEECCSCT----TCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHHTCCSEEEE
T ss_pred CCHHHHHHHHHH-HhhcC---CCceEEECCCCc----ccHHHHHHHHhhCCCCEEEcCCCCCHHHHHHHHHhCCCCEEEe
Confidence 455555444443 65511 244455665432 23566666766644433 3445678888888888888888888
Q ss_pred ccCCcccc-chhchHHHHHHcCCcEEeeccccc
Q 025789 90 EYSLWTRE-IEDDIIPLCRELGIGIVAYSPLGR 121 (248)
Q Consensus 90 ~~~~~~~~-~~~~~~~~~~~~gi~v~~~~~l~~ 121 (248)
..+..-.- ....+..+|+++|+.++..+.+.+
T Consensus 268 k~~~~GGit~~~~i~~~A~~~g~~~~~~~~~es 300 (366)
T 1tkk_A 268 KLMKAGGISGAEKINAMAEACGVECMVGSMIET 300 (366)
T ss_dssp CHHHHTSHHHHHHHHHHHHHHTCCEEECCSSCC
T ss_pred ehhhhcCHHHHHHHHHHHHHcCCcEEecCcccc
Confidence 65543211 125688999999999988776543
No 88
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A*
Probab=64.08 E-value=56 Score=26.39 Aligned_cols=100 Identities=14% Similarity=0.104 Sum_probs=57.7
Q ss_pred CHHHHHHHHHHHHhHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCcccEEeccCCcHHHHHHHhcc--CCcceecc
Q 025789 12 SPEYVRKCCEASLKRLDVDYIDLYYQHRVDTSVSIEDTMGELKKLVEEGKIKYIGLSEASADTIRRAHAV--HPITAVQM 89 (248)
Q Consensus 12 s~~~i~~~~e~SL~rL~~d~iDl~~lH~~~~~~~~~~~~~~l~~l~~~G~ir~iGvS~~~~~~l~~~~~~--~~~~~~q~ 89 (248)
+.+.+.+..++.. .-|-|.||+-- .. .....+|-++.+-...++-.=--|.+-+++++.++++++. +..-+ +
T Consensus 23 ~~~~a~~~a~~~v-~~GAdiIDIg~--g~-~~v~~~ee~~rvv~~i~~~~~~pisIDT~~~~v~~aAl~a~~Ga~iI--N 96 (262)
T 1f6y_A 23 DPAPVQEWARRQE-EGGARALDLNV--GP-AVQDKVSAMEWLVEVTQEVSNLTLCLDSTNIKAIEAGLKKCKNRAMI--N 96 (262)
T ss_dssp CHHHHHHHHHHHH-HHTCSEEEEBC--C-----CHHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHCSSCEEE--E
T ss_pred CHHHHHHHHHHHH-HCCCcEEEECC--CC-CCCChHHHHHHHHHHHHHhCCCeEEEeCCCHHHHHHHHhhCCCCCEE--E
Confidence 4455555554444 68889999876 11 1223333333333333331112577789999999999886 33222 2
Q ss_pred ccCCccccchhchHHHHHHcCCcEEeecc
Q 025789 90 EYSLWTREIEDDIIPLCRELGIGIVAYSP 118 (248)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~gi~v~~~~~ 118 (248)
..|... ...+++++.++++|..++.+..
T Consensus 97 dvs~~~-d~~~~~~~~~a~~~~~vvlmh~ 124 (262)
T 1f6y_A 97 STNAER-EKVEKLFPLAVEHGAALIGLTM 124 (262)
T ss_dssp EECSCH-HHHHHHHHHHHHTTCEEEEESC
T ss_pred ECCCCc-ccHHHHHHHHHHhCCcEEEEcC
Confidence 233321 1113789999999999998764
No 89
>2p8b_A Mandelate racemase/muconate lactonizing enzyme family protein; enolase superfamily, prediction of function; HET: NSK; 1.70A {Bacillus cereus atcc 14579} PDB: 2p88_A* 2p8c_A*
Probab=63.95 E-value=6.1 Score=33.70 Aligned_cols=73 Identities=8% Similarity=0.049 Sum_probs=51.2
Q ss_pred HHHHHHHHHHcCcccEE-eccCCcHHHHHHHhccCCcceeccccCCcccc-chhchHHHHHHcCCcEEeeccccc
Q 025789 49 TMGELKKLVEEGKIKYI-GLSEASADTIRRAHAVHPITAVQMEYSLWTRE-IEDDIIPLCRELGIGIVAYSPLGR 121 (248)
Q Consensus 49 ~~~~l~~l~~~G~ir~i-GvS~~~~~~l~~~~~~~~~~~~q~~~~~~~~~-~~~~~~~~~~~~gi~v~~~~~l~~ 121 (248)
-++.+.++++.-.|--+ |=+-+++..++++++....+++|+..+-.-.- ....+...|+++|+.++..+.+.+
T Consensus 225 d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~~es 299 (369)
T 2p8b_A 225 DIDAMAHIRSKTDLPLMIDEGLKSSREMRQIIKLEAADKVNIKLMKCGGIYPAVKLAHQAEMAGIECQVGSMVES 299 (369)
T ss_dssp CHHHHHHHHHTCCSCEEESTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEECCSSCC
T ss_pred cHHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHhCCCCEEEeecchhCCHHHHHHHHHHHHHcCCcEEecCCCcc
Confidence 46677777777555443 33556889999999888888888865543211 125688999999999988766543
No 90
>3s5s_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-biology, structural genomics, NEW YORK structural genomi research consortium; 2.40A {Sorangium cellulosum}
Probab=63.44 E-value=18 Score=31.07 Aligned_cols=87 Identities=17% Similarity=0.142 Sum_probs=62.7
Q ss_pred cccEEEeccCCCCCCHHHHHHHHHHHHHcCcc-cEEeccCCcHHHHHHHhccCCcceeccccCCccc-cchhchHHHHHH
Q 025789 31 YIDLYYQHRVDTSVSIEDTMGELKKLVEEGKI-KYIGLSEASADTIRRAHAVHPITAVQMEYSLWTR-EIEDDIIPLCRE 108 (248)
Q Consensus 31 ~iDl~~lH~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvS~~~~~~l~~~~~~~~~~~~q~~~~~~~~-~~~~~~~~~~~~ 108 (248)
-.++.++-.|-.... ++.+.+++++-.| -..|=|.++...+.+++....++++|+..+. -. .....+...|++
T Consensus 215 ~~~i~~iEeP~~~~d----~~~~~~l~~~~~iPIa~dEs~~~~~~~~~~i~~~a~d~v~~k~~~-GGit~~~~i~~~A~~ 289 (389)
T 3s5s_A 215 GADVALLEQPVPRDD----WDGMKEVTRRAGVDVAADESAASAEDVLRVAAERAATVVNIKLMK-GGIAEALDIAAVARA 289 (389)
T ss_dssp TCEEEEEECCSCTTC----HHHHHHHHHHSSSCEEESTTCSSHHHHHHHHHTTCCSEEEECHHH-HHHHHHHHHHHHHHH
T ss_pred CCCeEEEECCCCccc----HHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHcCCCCEEEecCCC-CCHHHHHHHHHHHHH
Confidence 348888888754333 4556666665444 4667788899999999988888999887665 21 112567899999
Q ss_pred cCCcEEeecccccc
Q 025789 109 LGIGIVAYSPLGRG 122 (248)
Q Consensus 109 ~gi~v~~~~~l~~G 122 (248)
+|+.++..+.+.++
T Consensus 290 ~gi~~~~~~~~es~ 303 (389)
T 3s5s_A 290 AGLGLMIGGMVESV 303 (389)
T ss_dssp TTCEEEECCSSCCH
T ss_pred cCCeEEecCCcccH
Confidence 99999998777654
No 91
>2ox4_A Putative mandelate racemase; enolase, dehydratase, structural genomics, protein structure initiative, PSI, nysgrc; 1.80A {Zymomonas mobilis}
Probab=62.76 E-value=6.8 Score=33.88 Aligned_cols=70 Identities=11% Similarity=-0.099 Sum_probs=46.4
Q ss_pred HHHHHHHHHcCcccEEec-cCCcHHHHHHHhccCCcceeccccCCcccc-chhchHHHHHHcCCcEEeeccc
Q 025789 50 MGELKKLVEEGKIKYIGL-SEASADTIRRAHAVHPITAVQMEYSLWTRE-IEDDIIPLCRELGIGIVAYSPL 119 (248)
Q Consensus 50 ~~~l~~l~~~G~ir~iGv-S~~~~~~l~~~~~~~~~~~~q~~~~~~~~~-~~~~~~~~~~~~gi~v~~~~~l 119 (248)
++.+.+++++-.|--++- +.++.+.++++++....+++|+..+-.-.- ....+..+|+++|+.++..+..
T Consensus 249 ~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGite~~~i~~~A~~~g~~~~~h~~~ 320 (403)
T 2ox4_A 249 PRLLKEAKKKIDIPLASGERIYSRWGFLPFLEDRSIDVIQPDLGTCGGFTEFKKIADMAHIFEVTVQAHVAG 320 (403)
T ss_dssp THHHHHHHHTCCSCEEECTTCCHHHHHHHHHHTTCCSEECCCHHHHTHHHHHHHHHHHHHHTTCEECCCCCS
T ss_pred HHHHHHHHHhCCCCEEecCCcCCHHHHHHHHHcCCCCEEecCccccCCHHHHHHHHHHHHHcCCEEeecCCC
Confidence 555666666555543333 445678888888877788888765542211 1257889999999999887664
No 92
>3ik4_A Mandelate racemase/muconate lactonizing protein; structural genomics, enolase, epimerase, PSI-2, protein STRU initiative; 2.10A {Herpetosiphon aurantiacus atcc 23779}
Probab=62.71 E-value=19 Score=30.71 Aligned_cols=86 Identities=9% Similarity=0.072 Sum_probs=61.9
Q ss_pred ccEEEeccCCCCCCHHHHHHHHHHHHHcCcc-cEEeccCCcHHHHHHHhccCCcceeccccCCcccc-chhchHHHHHHc
Q 025789 32 IDLYYQHRVDTSVSIEDTMGELKKLVEEGKI-KYIGLSEASADTIRRAHAVHPITAVQMEYSLWTRE-IEDDIIPLCREL 109 (248)
Q Consensus 32 iDl~~lH~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvS~~~~~~l~~~~~~~~~~~~q~~~~~~~~~-~~~~~~~~~~~~ 109 (248)
.++.++-.|-... -++.+.+++++-.| -..|=|.++...+.+++....++++|+..+. -.- ....+...|+++
T Consensus 215 ~~i~~iEeP~~~~----d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~a~d~v~ik~~~-GGit~~~~i~~~A~~~ 289 (365)
T 3ik4_A 215 IPMVLFEQPLPRE----DWAGMAQVTAQSGFAVAADESARSAHDVLRIAREGTASVINIKLMK-AGVAEGLKMIAIAQAA 289 (365)
T ss_dssp CCEEEEECCSCTT----CHHHHHHHHHHSSSCEEESTTCSSHHHHHHHHHHTCCSEEEECHHH-HCHHHHHHHHHHHHHH
T ss_pred CCceEEECCCCcc----cHHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHhCCCCEEEEcCCc-cCHHHHHHHHHHHHHc
Confidence 4788888775433 25566677766444 4556778889999999888888999887665 211 125678999999
Q ss_pred CCcEEeecccccc
Q 025789 110 GIGIVAYSPLGRG 122 (248)
Q Consensus 110 gi~v~~~~~l~~G 122 (248)
|+.++..+.+.++
T Consensus 290 gi~~~~~~~~es~ 302 (365)
T 3ik4_A 290 GLGLMIGGMVESI 302 (365)
T ss_dssp TCEEEECCSSCCH
T ss_pred CCeEEecCCcccH
Confidence 9999998777654
No 93
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=62.34 E-value=11 Score=31.11 Aligned_cols=104 Identities=13% Similarity=0.043 Sum_probs=62.8
Q ss_pred CCCHHHHHHHHHHHHhHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCcccEEeccCCcHHHHHHHhccCCcceecc
Q 025789 10 KGSPEYVRKCCEASLKRLDVDYIDLYYQHRVDTSVSIEDTMGELKKLVEEGKIKYIGLSEASADTIRRAHAVHPITAVQM 89 (248)
Q Consensus 10 ~~s~~~i~~~~e~SL~rL~~d~iDl~~lH~~~~~~~~~~~~~~l~~l~~~G~ir~iGvS~~~~~~l~~~~~~~~~~~~q~ 89 (248)
.++.+...+ +-+.|.++|+++|.+-..-.+...-.+.+.++.++.+++...++...+. .+...++.+.+.+ ++.+.+
T Consensus 22 ~~~~e~k~~-i~~~L~~~Gv~~IE~g~~~~~~~~p~~~~~~e~~~~i~~~~~~~v~~l~-~n~~~i~~a~~~G-~~~V~i 98 (295)
T 1ydn_A 22 FVPTADKIA-LINRLSDCGYARIEATSFVSPKWVPQLADSREVMAGIRRADGVRYSVLV-PNMKGYEAAAAAH-ADEIAV 98 (295)
T ss_dssp CCCHHHHHH-HHHHHTTTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCCCSSSEEEEEC-SSHHHHHHHHHTT-CSEEEE
T ss_pred CcCHHHHHH-HHHHHHHcCcCEEEEccCcCccccccccCHHHHHHHHHhCCCCEEEEEe-CCHHHHHHHHHCC-CCEEEE
Confidence 466666555 5566789999999987654333111123556666666655566665655 4567777777653 345555
Q ss_pred ccCCc--------cccc------hhchHHHHHHcCCcEEee
Q 025789 90 EYSLW--------TREI------EDDIIPLCRELGIGIVAY 116 (248)
Q Consensus 90 ~~~~~--------~~~~------~~~~~~~~~~~gi~v~~~ 116 (248)
..+.- .... ..+.+.+|+++|+.+.++
T Consensus 99 ~~~~S~~h~~~~~~~~~~e~~~~~~~~v~~a~~~G~~V~~~ 139 (295)
T 1ydn_A 99 FISASEGFSKANINCTIAESIERLSPVIGAAINDGLAIRGY 139 (295)
T ss_dssp EEESCHHHHHHHTSSCHHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred EEecCHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCeEEEE
Confidence 42111 1111 155689999999998754
No 94
>3r0u_A Enzyme of enolase superfamily; structural genomics, putative epimerase, PSI-biolog YORK structural genomics research consortium; HET: MSE TAR; 1.90A {Francisella philomiragia subsp} PDB: 3px5_A* 3r0k_A* 3r10_A 3r11_A 3r1z_A*
Probab=62.14 E-value=48 Score=28.32 Aligned_cols=87 Identities=9% Similarity=0.034 Sum_probs=59.4
Q ss_pred ccEEEeccCCCCCCHHHHHHHHHHHHHcCcc-cEEeccCCcHHHHHHHhccCCcceeccccCCccc-cchhchHHHHHHc
Q 025789 32 IDLYYQHRVDTSVSIEDTMGELKKLVEEGKI-KYIGLSEASADTIRRAHAVHPITAVQMEYSLWTR-EIEDDIIPLCREL 109 (248)
Q Consensus 32 iDl~~lH~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvS~~~~~~l~~~~~~~~~~~~q~~~~~~~~-~~~~~~~~~~~~~ 109 (248)
.++.++-.|-... -++.+.+++++-.| -..|-|-++..++.++++....+++|+.....-. .....+...|+++
T Consensus 214 ~~l~~iEeP~~~~----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~k~~~~GGi~~~~~ia~~A~~~ 289 (379)
T 3r0u_A 214 LNVEIIEQPVKYY----DIKAMAEITKFSNIPVVADESVFDAKDAERVIDEQACNMINIKLAKTGGILEAQKIKKLADSA 289 (379)
T ss_dssp CCEEEEECCSCTT----CHHHHHHHHHHCSSCEEESTTCSSHHHHHHHHHTTCCSEEEECHHHHTSHHHHHHHHHHHHHT
T ss_pred CCcEEEECCCCcc----cHHHHHHHHhcCCCCEEeCCccCCHHHHHHHHHcCCCCEEEECccccCCHHHHHHHHHHHHHc
Confidence 4666777664432 24566666665444 4556677888999999888888888886554321 1125688999999
Q ss_pred CCcEEeecccccc
Q 025789 110 GIGIVAYSPLGRG 122 (248)
Q Consensus 110 gi~v~~~~~l~~G 122 (248)
|+.++..+.+.++
T Consensus 290 gi~~~~~~~~es~ 302 (379)
T 3r0u_A 290 GISCMVGCMMESP 302 (379)
T ss_dssp TCEEEECCCSCCH
T ss_pred CCEEEEeCCCccH
Confidence 9999987766544
No 95
>4dwd_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, EFI, enzyme function initiative, metal protein; HET: MSE; 1.50A {Paracoccus denitrificans} PDB: 3n4e_A*
Probab=62.13 E-value=46 Score=28.60 Aligned_cols=100 Identities=12% Similarity=0.071 Sum_probs=62.7
Q ss_pred CCHHHHHHHHHHHHhHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCccc-EEeccCCcHHHHHHHhccCCcceecc
Q 025789 11 GSPEYVRKCCEASLKRLDVDYIDLYYQHRVDTSVSIEDTMGELKKLVEEGKIK-YIGLSEASADTIRRAHAVHPITAVQM 89 (248)
Q Consensus 11 ~s~~~i~~~~e~SL~rL~~d~iDl~~lH~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvS~~~~~~l~~~~~~~~~~~~q~ 89 (248)
++.+...+ +-+.|+.+++++| ..|-.. +.++.+.+++++-.|- ..|=|-++...++++++.. ++++|+
T Consensus 202 ~~~~~A~~-~~~~L~~~~i~~i-----EqP~~~----~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~-~d~v~~ 270 (393)
T 4dwd_A 202 YSVGGAIR-VGRALEDLGYSWF-----EEPVQH----YHVGAMGEVAQRLDITVSAGEQTYTLQALKDLILSG-VRMVQP 270 (393)
T ss_dssp CCHHHHHH-HHHHHHHTTCSEE-----ECCSCT----TCHHHHHHHHHHCSSEEEBCTTCCSHHHHHHHHHHT-CCEECC
T ss_pred CCHHHHHH-HHHHHHhhCCCEE-----ECCCCc----ccHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcC-CCEEEe
Confidence 34444333 2345566655444 344322 1356666777665443 3345667888999988888 999998
Q ss_pred ccCCcccc-chhchHHHHHHcCCcEEeecccccc
Q 025789 90 EYSLWTRE-IEDDIIPLCRELGIGIVAYSPLGRG 122 (248)
Q Consensus 90 ~~~~~~~~-~~~~~~~~~~~~gi~v~~~~~l~~G 122 (248)
..+..-.- ....+..+|+.+|+.++..+. .++
T Consensus 271 k~~~~GGit~~~~ia~~A~~~gi~~~~h~~-~~~ 303 (393)
T 4dwd_A 271 DIVKMGGITGMMQCAALAHAHGVEFVPHQT-QPG 303 (393)
T ss_dssp CTTTTTHHHHHHHHHHHHHHHTCEECCCCC-CSS
T ss_pred CccccCCHHHHHHHHHHHHHcCCEEeecCC-CcH
Confidence 77664321 125788999999999988776 443
No 96
>3mwc_A Mandelate racemase/muconate lactonizing protein; enolase, structural genomics, protein structure initiative, nysgrc; 1.80A {Kosmotoga olearia}
Probab=61.87 E-value=27 Score=30.09 Aligned_cols=101 Identities=10% Similarity=-0.053 Sum_probs=66.5
Q ss_pred CCHHHHHHHHHHHHhHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCcc-cEEeccCCcHHHHHHHhccCCcceecc
Q 025789 11 GSPEYVRKCCEASLKRLDVDYIDLYYQHRVDTSVSIEDTMGELKKLVEEGKI-KYIGLSEASADTIRRAHAVHPITAVQM 89 (248)
Q Consensus 11 ~s~~~i~~~~e~SL~rL~~d~iDl~~lH~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvS~~~~~~l~~~~~~~~~~~~q~ 89 (248)
++.+. .+ +-+.|+.+++++| ..|-... -++.+.++++.-.| -..|=|-++...+.++++...++++|+
T Consensus 216 w~~~~-~~-~~~~l~~~~i~~i-----EqP~~~~----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~~~d~v~~ 284 (400)
T 3mwc_A 216 FELDQ-WE-TFKAMDAAKCLFH-----EQPLHYE----ALLDLKELGERIETPICLDESLISSRVAEFVAKLGISNIWNI 284 (400)
T ss_dssp CCGGG-HH-HHHHHGGGCCSCE-----ESCSCTT----CHHHHHHHHHHSSSCEEESTTCCSHHHHHHHHHTTCCSEEEE
T ss_pred CCHHH-HH-HHHHHHhcCCCEE-----eCCCChh----hHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHhcCCCCEEEE
Confidence 34444 32 3356777776554 4553322 35667777776444 355667788999999999888899988
Q ss_pred ccCCccc-cchhchHHHHHHcCCcEEeecccccc
Q 025789 90 EYSLWTR-EIEDDIIPLCRELGIGIVAYSPLGRG 122 (248)
Q Consensus 90 ~~~~~~~-~~~~~~~~~~~~~gi~v~~~~~l~~G 122 (248)
..+..-. .....+...|+++|+.++..+.+.+|
T Consensus 285 k~~~~GGit~~~~ia~~A~~~gi~~~~~~~~es~ 318 (400)
T 3mwc_A 285 KIQRVGGLLEAIKIYKIATDNGIKLWGGTMPESG 318 (400)
T ss_dssp CHHHHTSHHHHHHHHHHHHHTTCEEEECCSCCCH
T ss_pred cchhhCCHHHHHHHHHHHHHcCCEEEecCCCCCH
Confidence 7654321 11267889999999999887655544
No 97
>1w6t_A Enolase; bacterial infection, surface protein, moonlighting protein, glycolysis, phosphopyruvate hydratase, lyase; HET: 2PE; 2.10A {Streptococcus pneumoniae} SCOP: c.1.11.1 d.54.1.1 PDB: 1iyx_A
Probab=61.40 E-value=72 Score=27.85 Aligned_cols=96 Identities=13% Similarity=0.062 Sum_probs=63.1
Q ss_pred CCHHHHHHHHHHHHhHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHc-C-ccc-EEecc-CCcHHHHHHHhccCCcce
Q 025789 11 GSPEYVRKCCEASLKRLDVDYIDLYYQHRVDTSVSIEDTMGELKKLVEE-G-KIK-YIGLS-EASADTIRRAHAVHPITA 86 (248)
Q Consensus 11 ~s~~~i~~~~e~SL~rL~~d~iDl~~lH~~~~~~~~~~~~~~l~~l~~~-G-~ir-~iGvS-~~~~~~l~~~~~~~~~~~ 86 (248)
++++...+-+++-.+++ ++++|-.|-+..+ ++.+.++++. | .|. ..|=+ .++...+.++++....++
T Consensus 279 ~t~~eai~~~~~l~~~~-----~i~~iEePl~~~d----~~~~~~l~~~~~~~ipIa~dE~~~~~~~~~~~~i~~~a~d~ 349 (444)
T 1w6t_A 279 RTSAEQIDYLEELVNKY-----PIITIEDGMDEND----WDGWKALTERLGKKVQLVGDDFFVTNTDYLARGIQEGAANS 349 (444)
T ss_dssp ECHHHHHHHHHHHHHHS-----CEEEEESCSCTTC----HHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHHTCCSE
T ss_pred CCHHHHHHHHHHHHHhC-----CcEEEECCCChhh----HHHHHHHHHhhCCCCeEEeCCcccCCHHHHHHHHHcCCCCE
Confidence 56666666555544433 6888988865443 3445555544 2 343 34445 678999999998888889
Q ss_pred eccccCCcccc-chhchHHHHHHcCCcEEe
Q 025789 87 VQMEYSLWTRE-IEDDIIPLCRELGIGIVA 115 (248)
Q Consensus 87 ~q~~~~~~~~~-~~~~~~~~~~~~gi~v~~ 115 (248)
+|+..+-.-.- ...++...|+++|+.++.
T Consensus 350 i~ik~~~~GGitea~~ia~lA~~~g~~v~~ 379 (444)
T 1w6t_A 350 ILIKVNQIGTLTETFEAIEMAKEAGYTAVV 379 (444)
T ss_dssp EEECHHHHCSHHHHHHHHHHHHHTTCEEEE
T ss_pred EEEcccccCCHHHHHHHHHHHHHCCCeEEe
Confidence 98875543221 125688999999999987
No 98
>2xvc_A ESCRT-III, SSO0910; cell cycle, cell division, cytokinesis, winged-helix; 2.15A {Sulfolobus solfataricus}
Probab=61.26 E-value=8 Score=23.66 Aligned_cols=21 Identities=24% Similarity=0.316 Sum_probs=18.5
Q ss_pred CCHHHHHHHHHHHHHcCcccE
Q 025789 44 VSIEDTMGELKKLVEEGKIKY 64 (248)
Q Consensus 44 ~~~~~~~~~l~~l~~~G~ir~ 64 (248)
...++++++|.+|.++|+|+-
T Consensus 37 V~kdeV~~~LrrLe~KGLI~l 57 (59)
T 2xvc_A 37 VEKQEVVKLLEALKNKGLIAV 57 (59)
T ss_dssp CCHHHHHHHHHHHHHTTSEEE
T ss_pred CCHHHHHHHHHHHHHCCCeec
Confidence 457899999999999999974
No 99
>1v5x_A PRA isomerase, phosphoribosylanthranilate isomerase; alpha-beta barrel, TRPF, riken structural genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.1.2.4
Probab=60.87 E-value=18 Score=28.21 Aligned_cols=66 Identities=8% Similarity=0.091 Sum_probs=43.6
Q ss_pred HhHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCcccEEecc-CCcHHHHHHHhccCCcceecccc
Q 025789 24 LKRLDVDYIDLYYQHRVDTSVSIEDTMGELKKLVEEGKIKYIGLS-EASADTIRRAHAVHPITAVQMEY 91 (248)
Q Consensus 24 L~rL~~d~iDl~~lH~~~~~~~~~~~~~~l~~l~~~G~ir~iGvS-~~~~~~l~~~~~~~~~~~~q~~~ 91 (248)
..++|.||+=+++.-........+.+ ..+.... ...+..+||- |.+++.+.++.....++++|+.-
T Consensus 17 a~~~GaD~iGfif~~~SpR~V~~~~a-~~i~~~~-~~~~~~VgVfvn~~~~~i~~~~~~~~ld~vQLHG 83 (203)
T 1v5x_A 17 AEALGAFALGFVLAPGSRRRIAPEAA-RAIGEAL-GPFVVRVGVFRDQPPEEVLRLMEEARLQVAQLHG 83 (203)
T ss_dssp HHHHTCSEEEEECCTTCTTBCCHHHH-HHHHHHS-CSSSEEEEEESSCCHHHHHHHHHHTTCSEEEECS
T ss_pred HHHcCCCEEEEEecCCCCCcCCHHHH-HHHHHhC-CCCCCEEEEEeCCCHHHHHHHHHhhCCCEEEECC
Confidence 45789999998853211222334333 3332222 2458899996 56899999999989999999963
No 100
>3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A*
Probab=60.32 E-value=33 Score=28.90 Aligned_cols=84 Identities=10% Similarity=-0.005 Sum_probs=58.5
Q ss_pred ccEEEeccCCCCCCHHHHHHHHHHHHHcCcc-cEEeccCCcHHHHHHHhccCCcceeccccCCcccc-chhchHHHHHHc
Q 025789 32 IDLYYQHRVDTSVSIEDTMGELKKLVEEGKI-KYIGLSEASADTIRRAHAVHPITAVQMEYSLWTRE-IEDDIIPLCREL 109 (248)
Q Consensus 32 iDl~~lH~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvS~~~~~~l~~~~~~~~~~~~q~~~~~~~~~-~~~~~~~~~~~~ 109 (248)
.++.+|..|-... -++.+.+++++-.| -..|=|-++...+.++++....+++|+..+..-.- ....+..+|+++
T Consensus 209 ~~i~~iEqP~~~~----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~k~~~~GGit~~~~i~~~A~~~ 284 (354)
T 3jva_A 209 YQIELVEQPVKRR----DLEGLKYVTSQVNTTIMADESCFDAQDALELVKKGTVDVINIKLMKCGGIHEALKINQICETA 284 (354)
T ss_dssp SCEEEEECCSCTT----CHHHHHHHHHHCSSEEEESTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHT
T ss_pred cCCCEEECCCChh----hHHHHHHHHHhCCCCEEEcCCcCCHHHHHHHHHcCCCCEEEECchhcCCHHHHHHHHHHHHHc
Confidence 4666776664432 35666777776555 34455677899999998888888888875543211 126788999999
Q ss_pred CCcEEeeccc
Q 025789 110 GIGIVAYSPL 119 (248)
Q Consensus 110 gi~v~~~~~l 119 (248)
|+.++..+.+
T Consensus 285 gi~~~~~~~~ 294 (354)
T 3jva_A 285 GIECMIGCMA 294 (354)
T ss_dssp TCEEEECCCT
T ss_pred CCeEEecCCC
Confidence 9999987777
No 101
>2hxt_A L-fuconate dehydratase; enolase superfamily, D-erythromohydr unknown function; HET: EHM; 1.70A {Xanthomonas campestris PV} PDB: 1yey_A 2hxu_A* 2hne_A
Probab=60.12 E-value=17 Score=31.86 Aligned_cols=96 Identities=8% Similarity=0.076 Sum_probs=61.1
Q ss_pred CCHHHHHHHHHHHHhHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHc-Ccc-cEEeccCCcHHHHHHHhccCCcceec
Q 025789 11 GSPEYVRKCCEASLKRLDVDYIDLYYQHRVDTSVSIEDTMGELKKLVEE-GKI-KYIGLSEASADTIRRAHAVHPITAVQ 88 (248)
Q Consensus 11 ~s~~~i~~~~e~SL~rL~~d~iDl~~lH~~~~~~~~~~~~~~l~~l~~~-G~i-r~iGvS~~~~~~l~~~~~~~~~~~~q 88 (248)
++.+...+-++. |+.+++++ +..|-.. +-++.+.++++. +.| -..|=+.++...++++++....+++|
T Consensus 253 ~~~~~a~~~~~~-l~~~~i~~-----iEqP~~~----~d~~~~~~l~~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ 322 (441)
T 2hxt_A 253 WDVGPAIDWMRQ-LAEFDIAW-----IEEPTSP----DDVLGHAAIRQGITPVPVSTGEHTQNRVVFKQLLQAGAVDLIQ 322 (441)
T ss_dssp CCHHHHHHHHHT-TGGGCCSC-----EECCSCT----TCHHHHHHHHHHHTTSCEEECTTCCSHHHHHHHHHHTCCSEEC
T ss_pred CCHHHHHHHHHH-HHhcCCCe-----eeCCCCH----HHHHHHHHHHhhCCCCCEEEeCCcCCHHHHHHHHHcCCCCEEE
Confidence 455554444433 66666554 3444322 235566666665 223 34455677899999999888899999
Q ss_pred cccCCcccc-chhchHHHHHHcCCcEEee
Q 025789 89 MEYSLWTRE-IEDDIIPLCRELGIGIVAY 116 (248)
Q Consensus 89 ~~~~~~~~~-~~~~~~~~~~~~gi~v~~~ 116 (248)
+..+-.-.- ....+...|+++|+.++.+
T Consensus 323 ik~~~~GGite~~~ia~~A~~~g~~~~~h 351 (441)
T 2hxt_A 323 IDAARVGGVNENLAILLLAAKFGVRVFPH 351 (441)
T ss_dssp CCTTTSSHHHHHHHHHHHHHHTTCEECCC
T ss_pred eCcceeCCHHHHHHHHHHHHHcCCeEEEe
Confidence 877654321 1256889999999998654
No 102
>4h1z_A Enolase Q92ZS5; dehydratase, magnesium binding site, enzyme function initiat isomerase; 2.01A {Sinorhizobium meliloti} PDB: 2ppg_A
Probab=59.47 E-value=25 Score=30.44 Aligned_cols=86 Identities=14% Similarity=0.147 Sum_probs=60.0
Q ss_pred ccEEEeccCCCCCCHHHHHHHHHHHHHcCcc-cEEeccCCcHHHHHHHhccCCcceeccccCCccccc--hhchHHHHHH
Q 025789 32 IDLYYQHRVDTSVSIEDTMGELKKLVEEGKI-KYIGLSEASADTIRRAHAVHPITAVQMEYSLWTREI--EDDIIPLCRE 108 (248)
Q Consensus 32 iDl~~lH~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvS~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~--~~~~~~~~~~ 108 (248)
.++.++-.|-... -++.+.+++++-.| -..|=|.++...+.++++...++++|....- ... ...+...|+.
T Consensus 258 ~~l~~iEqP~~~~----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~div~~d~~~--GGit~~~kia~~A~~ 331 (412)
T 4h1z_A 258 HGLWFAEAPVRTE----DIDGLARVAASVSTAIAVGEEWRTVHDMVPRVARRALAIVQPEMGH--KGITQFMRIGAYAHV 331 (412)
T ss_dssp GCEEEEECCSCTT----CHHHHHHHHHHCSSEEEECTTCCSHHHHHHHHHTTCCSEECCCHHH--HHHHHHHHHHHHHHH
T ss_pred cccceecCCCCcc----chHHHHHHHhhcCCccccCCcccchHhHHHHHHcCCCCEEEecCCC--CChHHHHHHHHHHHH
Confidence 3566676664332 25566677776544 4556778899999999888888888887431 111 1567889999
Q ss_pred cCCcEEeeccccccc
Q 025789 109 LGIGIVAYSPLGRGF 123 (248)
Q Consensus 109 ~gi~v~~~~~l~~G~ 123 (248)
+|+.++..+.++.|+
T Consensus 332 ~gi~v~~h~~~~~~i 346 (412)
T 4h1z_A 332 HHIKVIPHATIGAGI 346 (412)
T ss_dssp TTCEECCCCCSSCSH
T ss_pred CCCcEEecCCcchHH
Confidence 999999988877654
No 103
>2vp8_A Dihydropteroate synthase 2; RV1207 transferase, folate biosynthesis, antibiotic resistance; 2.64A {Mycobacterium tuberculosis}
Probab=59.22 E-value=25 Score=29.54 Aligned_cols=109 Identities=15% Similarity=0.042 Sum_probs=59.1
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHhHcCCCcccEEEec-cCCCCCCHHH----HHHHHHHHHHcCcccEEeccCCcHHHH
Q 025789 1 MLDGVSIGVKGSPEYVRKCCEASLKRLDVDYIDLYYQH-RVDTSVSIED----TMGELKKLVEEGKIKYIGLSEASADTI 75 (248)
Q Consensus 1 ~~~~~~~~~~~s~~~i~~~~e~SL~rL~~d~iDl~~lH-~~~~~~~~~~----~~~~l~~l~~~G~ir~iGvS~~~~~~l 75 (248)
|.|+|.+. +.+.+.+..+ .+-.-|-|.||+=--- +|....+.+| ++..++.++++--=--|.|-++.++.+
T Consensus 55 Fsdgg~~~---~~~~a~~~A~-~~v~~GAdIIDIGgeSTrPG~~v~~~eEl~Rv~pvI~~l~~~~~~vpISIDT~~~~Va 130 (318)
T 2vp8_A 55 FYDKGATF---SDAAARDAVH-RAVADGADVIDVGGVKAGPGERVDVDTEITRLVPFIEWLRGAYPDQLISVDTWRAQVA 130 (318)
T ss_dssp ------------CHHHHHHHH-HHHHTTCSEEEEC----------CHHHHHHHHHHHHHHHHHHSTTCEEEEECSCHHHH
T ss_pred ccCCCccC---CHHHHHHHHH-HHHHCCCCEEEECCCcCCCCCCCCHHHHHHHHHHHHHHHHhhCCCCeEEEeCCCHHHH
Confidence 55666542 4455555544 4455688888886532 2332233332 445566766651012578889999999
Q ss_pred HHHhccCCcceeccccCCccccchhchHHHHHHcCCcEEeecc
Q 025789 76 RRAHAVHPITAVQMEYSLWTREIEDDIIPLCRELGIGIVAYSP 118 (248)
Q Consensus 76 ~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~gi~v~~~~~ 118 (248)
+++++.+.--++ ..+-.. ..++++.++++|..++.+.-
T Consensus 131 eaAl~aGa~iIN--DVsg~~---d~~m~~vaa~~g~~vVlmh~ 168 (318)
T 2vp8_A 131 KAACAAGADLIN--DTWGGV---DPAMPEVAAEFGAGLVCAHT 168 (318)
T ss_dssp HHHHHHTCCEEE--ETTSSS---STTHHHHHHHHTCEEEEECC
T ss_pred HHHHHhCCCEEE--ECCCCC---chHHHHHHHHhCCCEEEECC
Confidence 999887542222 223222 35789999999999998763
No 104
>4dye_A Isomerase; enolase family protein, EFI, enzym function initiative; 1.60A {Streptomyces coelicolor} PDB: 2oqh_A
Probab=58.97 E-value=18 Score=31.23 Aligned_cols=97 Identities=12% Similarity=0.197 Sum_probs=62.8
Q ss_pred CCHHHHHHHHHHHHhHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCcc-cEEeccCCcHHHHHHHhccCCcceecc
Q 025789 11 GSPEYVRKCCEASLKRLDVDYIDLYYQHRVDTSVSIEDTMGELKKLVEEGKI-KYIGLSEASADTIRRAHAVHPITAVQM 89 (248)
Q Consensus 11 ~s~~~i~~~~e~SL~rL~~d~iDl~~lH~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvS~~~~~~l~~~~~~~~~~~~q~ 89 (248)
++.+...+ +-+.|+.++++ ++..|-. -++.+.+++++-.| -..|=|-++...+.++++...++++|+
T Consensus 223 w~~~~A~~-~~~~l~~~~i~-----~iEqP~~------d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~ 290 (398)
T 4dye_A 223 WSVPDSVR-AGIALEELDLE-----YLEDPCV------GIEGMAQVKAKVRIPLCTNMCVVRFEDFAPAMRLNAVDVIHG 290 (398)
T ss_dssp SCHHHHHH-HHHHHGGGCCS-----EEECCSS------HHHHHHHHHHHCCSCEEESSSCCSGGGHHHHHHTTCCSEEEE
T ss_pred CCHHHHHH-HHHHHhhcCCC-----EEcCCCC------CHHHHHHHHhhCCCCEEeCCcCCCHHHHHHHHHhCCCCEEEe
Confidence 44444333 33455555544 3444432 46777777776444 445567778888999988888888888
Q ss_pred ccCCcccc-chhchHHHHHHcCCcEEeeccc
Q 025789 90 EYSLWTRE-IEDDIIPLCRELGIGIVAYSPL 119 (248)
Q Consensus 90 ~~~~~~~~-~~~~~~~~~~~~gi~v~~~~~l 119 (248)
.....-.- ....+..+|+++|+.++..+..
T Consensus 291 k~~~~GGit~~~~ia~~A~~~gi~~~~h~~~ 321 (398)
T 4dye_A 291 DVYKWGGIAATKALAAHCETFGLGMNLHSGG 321 (398)
T ss_dssp CHHHHTSHHHHHHHHHHHHHHTCEEEECCSC
T ss_pred CccccCCHHHHHHHHHHHHHcCCeEEEcCCc
Confidence 75543211 1256899999999999997744
No 105
>3u9i_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, PSI-biology; 2.90A {Roseiflexus SP}
Probab=57.80 E-value=21 Score=30.79 Aligned_cols=86 Identities=14% Similarity=0.054 Sum_probs=59.6
Q ss_pred ccEEEeccCCCCCCHHHHHHHHHHHHHcCcc-cEEeccCCcHHHHHHHhccCCcceeccccCCcccc-chhchHHHHHHc
Q 025789 32 IDLYYQHRVDTSVSIEDTMGELKKLVEEGKI-KYIGLSEASADTIRRAHAVHPITAVQMEYSLWTRE-IEDDIIPLCREL 109 (248)
Q Consensus 32 iDl~~lH~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvS~~~~~~l~~~~~~~~~~~~q~~~~~~~~~-~~~~~~~~~~~~ 109 (248)
.++.++-.|-... -++.+.+++++-.| -+.|=|.++...+.++++...++++|+.... -.- ....+...|+++
T Consensus 245 ~~i~~iEeP~~~~----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~i~~k~~~-GGit~~~~ia~~A~~~ 319 (393)
T 3u9i_A 245 IVPALFEQPVAKD----DEEGLRRLTATRRVPVAADESVASATDAARLARNAAVDVLNIKLMK-CGIVEALDIAAIARTA 319 (393)
T ss_dssp CCCSEEECCSCTT----CTTHHHHHHHTCSSCEEESTTCCSHHHHHHHHHTTCCSEEEECHHH-HCHHHHHHHHHHHHHH
T ss_pred CCeEEEECCCCCC----cHHHHHHHHhhCCCcEEeCCcCCCHHHHHHHHHcCCCCEEEecccc-cCHHHHHHHHHHHHHc
Confidence 4666666664322 24455666665444 4667788889999999888888999887665 211 125688999999
Q ss_pred CCcEEeecccccc
Q 025789 110 GIGIVAYSPLGRG 122 (248)
Q Consensus 110 gi~v~~~~~l~~G 122 (248)
|+.++..+.+.++
T Consensus 320 gi~~~~~~~~es~ 332 (393)
T 3u9i_A 320 GLHLMIGGMVESL 332 (393)
T ss_dssp TCEEEECCSSCCH
T ss_pred CCeEEecCCcccH
Confidence 9999988777554
No 106
>1kcz_A Beta-methylaspartase; beta zigzag, alpha/beta-barrel, lyase; 1.90A {Clostridium tetanomorphum} SCOP: c.1.11.2 d.54.1.1 PDB: 1kd0_A* 3zvi_A 3zvh_A
Probab=57.51 E-value=45 Score=28.82 Aligned_cols=82 Identities=12% Similarity=0.022 Sum_probs=57.5
Q ss_pred EeccCCCCCCHHHHHHHHHHHHHc-----Ccc-cEEeccCCcHHHHHHHhccCCcceeccccCCcccc-chhchHHHHHH
Q 025789 36 YQHRVDTSVSIEDTMGELKKLVEE-----GKI-KYIGLSEASADTIRRAHAVHPITAVQMEYSLWTRE-IEDDIIPLCRE 108 (248)
Q Consensus 36 ~lH~~~~~~~~~~~~~~l~~l~~~-----G~i-r~iGvS~~~~~~l~~~~~~~~~~~~q~~~~~~~~~-~~~~~~~~~~~ 108 (248)
+|-.|-+.....+-++.+.+++++ -.| -..|=|.++...+.++++....+++|+..+-.-.- ....+..+|++
T Consensus 271 ~iEqP~~~~~~~~d~~~~~~l~~~l~~~g~~ipIa~dE~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~i~~~A~~ 350 (413)
T 1kcz_A 271 RIEGPMDVEDRQKQMEAMRDLRAELDGRGVDAELVADEWCNTVEDVKFFTDNKAGHMVQIKTPDLGGVNNIADAIMYCKA 350 (413)
T ss_dssp EEECSBCCSSHHHHHHHHHHHHHHHHHHTCCEEEEECTTCCSHHHHHHHHHTTCSSEEEECTGGGSSTHHHHHHHHHHHH
T ss_pred EEecCCCCCCCcccHHHHHHHHHhhhcCCCCCcEEeCCCcCCHHHHHHHHHhCCCCEEEeCccccCCHHHHHHHHHHHHH
Confidence 666664322145567777777776 233 34566778899999999888889999877654321 12578899999
Q ss_pred cCCcEEeec
Q 025789 109 LGIGIVAYS 117 (248)
Q Consensus 109 ~gi~v~~~~ 117 (248)
+|+.++..+
T Consensus 351 ~gi~~~~~~ 359 (413)
T 1kcz_A 351 NGMGAYCGG 359 (413)
T ss_dssp TTCEEEECC
T ss_pred cCCEEEecC
Confidence 999999865
No 107
>3i6e_A Muconate cycloisomerase I; structural genomics, NYSGXRC, targer 9468A, muconate lactonizing enzyme, PSI-2, protein structure initiative; 1.70A {Ruegeria pomeroyi} PDB: 3i6t_A
Probab=57.41 E-value=24 Score=30.23 Aligned_cols=93 Identities=10% Similarity=0.063 Sum_probs=61.0
Q ss_pred HHHHhHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCcc-cEEeccCCcHHHHHHHhccCCcceeccccCCccc-cc
Q 025789 21 EASLKRLDVDYIDLYYQHRVDTSVSIEDTMGELKKLVEEGKI-KYIGLSEASADTIRRAHAVHPITAVQMEYSLWTR-EI 98 (248)
Q Consensus 21 e~SL~rL~~d~iDl~~lH~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvS~~~~~~l~~~~~~~~~~~~q~~~~~~~~-~~ 98 (248)
-+.|+.+++++| ..|-.. +-++.+.+++++-.| -..|=|-++...+.++++...++++|+..+..-. ..
T Consensus 212 ~~~L~~~~i~~i-----EqP~~~----~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~ 282 (385)
T 3i6e_A 212 VLDVAQFQPDFI-----EQPVRA----HHFELMARLRGLTDVPLLADESVYGPEDMVRAAHEGICDGVSIKIMKSGGLTR 282 (385)
T ss_dssp HHHHHTTCCSCE-----ECCSCT----TCHHHHHHHHTTCSSCEEESTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHH
T ss_pred HHHHHhcCCCEE-----ECCCCc----ccHHHHHHHHHhCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEecccccCCHHH
Confidence 345566665554 344322 235677777776444 3456677889999999888888888886554221 11
Q ss_pred hhchHHHHHHcCCcEEeecccccc
Q 025789 99 EDDIIPLCRELGIGIVAYSPLGRG 122 (248)
Q Consensus 99 ~~~~~~~~~~~gi~v~~~~~l~~G 122 (248)
...+..+|+++|+.++..+.+.+|
T Consensus 283 ~~~i~~~A~~~gi~~~~~~~~es~ 306 (385)
T 3i6e_A 283 AQTVARIAAAHGLMAYGGDMFEAG 306 (385)
T ss_dssp HHHHHHHHHHTTCEEEECCCSCCH
T ss_pred HHHHHHHHHHcCCEEEeCCCCccH
Confidence 256889999999999876655544
No 108
>3ddm_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9284B, enolase family, PSI-2; 2.60A {Bordetella bronchiseptica}
Probab=57.40 E-value=29 Score=29.81 Aligned_cols=98 Identities=12% Similarity=0.075 Sum_probs=62.7
Q ss_pred CCHHHHHHHHHHHHhHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCcc-cEEeccCCcHHHHHHHhccCCcceecc
Q 025789 11 GSPEYVRKCCEASLKRLDVDYIDLYYQHRVDTSVSIEDTMGELKKLVEEGKI-KYIGLSEASADTIRRAHAVHPITAVQM 89 (248)
Q Consensus 11 ~s~~~i~~~~e~SL~rL~~d~iDl~~lH~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvS~~~~~~l~~~~~~~~~~~~q~ 89 (248)
++.+...+ +-+.|+.+++++| ..|-+... .++.+.++++.-.| -..|=|-++..+++++++...++++|+
T Consensus 210 ~~~~~A~~-~~~~L~~~~i~~i-----EeP~~~~d---~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~ 280 (392)
T 3ddm_A 210 WDLPRARQ-MAQRLGPAQLDWL-----EEPLRADR---PAAEWAELAQAAPMPLAGGENIAGVAAFETALAARSLRVMQP 280 (392)
T ss_dssp CCHHHHHH-HHHHHGGGCCSEE-----ECCSCTTS---CHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHHTCEEEECC
T ss_pred CCHHHHHH-HHHHHHHhCCCEE-----ECCCCccc---hHHHHHHHHHhcCCCEEeCCCCCCHHHHHHHHHcCCCCEEEe
Confidence 44444333 3345666665544 34433211 15667777776444 344567788999999988888899988
Q ss_pred ccCCcccc-chhchHHHHHHcCCcEEeec
Q 025789 90 EYSLWTRE-IEDDIIPLCRELGIGIVAYS 117 (248)
Q Consensus 90 ~~~~~~~~-~~~~~~~~~~~~gi~v~~~~ 117 (248)
...-.-.- ....+..+|+++|+.++...
T Consensus 281 k~~~~GGit~~~~ia~~A~~~gi~~~~h~ 309 (392)
T 3ddm_A 281 DLAKWGGFSGCLPVARAVVAAGLRYCPHY 309 (392)
T ss_dssp CTTTTTHHHHHHHHHHHHHHTTCEECCEE
T ss_pred CcchhCCHHHHHHHHHHHHHcCCEEEecC
Confidence 76653211 12578999999999997544
No 109
>4e8g_A Enolase, mandelate racemase/muconate lactonizing enzyme, N domain protein; putative racemase, nysgrc, structural genomics, PSI-biology; 2.00A {Paracoccus denitrificans}
Probab=57.13 E-value=34 Score=29.44 Aligned_cols=92 Identities=12% Similarity=0.086 Sum_probs=62.6
Q ss_pred HHhHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCcc-cEEeccCCcHHHHHHHhccCCcceeccccCCcccc-chh
Q 025789 23 SLKRLDVDYIDLYYQHRVDTSVSIEDTMGELKKLVEEGKI-KYIGLSEASADTIRRAHAVHPITAVQMEYSLWTRE-IED 100 (248)
Q Consensus 23 SL~rL~~d~iDl~~lH~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvS~~~~~~l~~~~~~~~~~~~q~~~~~~~~~-~~~ 100 (248)
-+++|. + .++ ++-.|-. .++.+.++++.-.| -..|=|.++...+.++++...++++|+.....-.- ...
T Consensus 229 ~~~~L~-~-~~i-~iEeP~~------~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~a~d~v~ik~~~~GGit~~~ 299 (391)
T 4e8g_A 229 LSRECP-E-IPF-VLEQPCN------TLEEIAAIRGRVQHGIYLDESGEDLSTVIRAAGQGLCDGFGMKLTRIGGLQQMA 299 (391)
T ss_dssp HHHHCT-T-SCE-EEESCSS------SHHHHHHHGGGCCSCEEESTTCCSHHHHHHHHHTTCCSEEEEEHHHHTSHHHHH
T ss_pred HHHHHh-h-cCe-EEecCCc------cHHHHHHHHhhCCCCEEeCCCCCCHHHHHHHHHcCCCCEEEeCccccCCHHHHH
Confidence 344453 2 367 6766621 35667777766544 35566788899999999888888988865543211 125
Q ss_pred chHHHHHHcCCcEEeeccccccc
Q 025789 101 DIIPLCRELGIGIVAYSPLGRGF 123 (248)
Q Consensus 101 ~~~~~~~~~gi~v~~~~~l~~G~ 123 (248)
.+..+|+++|+.++..+.+.+++
T Consensus 300 ~ia~~A~~~gi~~~~~~~~es~i 322 (391)
T 4e8g_A 300 AFRDICEARALPHSCDDAWGGDI 322 (391)
T ss_dssp HHHHHHHHTTCCEEEECSSCSHH
T ss_pred HHHHHHHHcCCeEEeCCcCCCHH
Confidence 68899999999999887776543
No 110
>2hzg_A Mandelate racemase/muconate lactonizing enzyme/EN superfamily; structural genomics, predicted mandelate racemase, PSI; 2.02A {Rhodobacter sphaeroides}
Probab=56.57 E-value=28 Score=29.95 Aligned_cols=95 Identities=11% Similarity=0.071 Sum_probs=60.8
Q ss_pred CHHHHHHHHHHHHhHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHH-cCcccEEec-cCCcHHHHHHHhccCCcceecc
Q 025789 12 SPEYVRKCCEASLKRLDVDYIDLYYQHRVDTSVSIEDTMGELKKLVE-EGKIKYIGL-SEASADTIRRAHAVHPITAVQM 89 (248)
Q Consensus 12 s~~~i~~~~e~SL~rL~~d~iDl~~lH~~~~~~~~~~~~~~l~~l~~-~G~ir~iGv-S~~~~~~l~~~~~~~~~~~~q~ 89 (248)
+.+...+-++. |+.+++++| ..|-.. +-++.+.++++ .-.|--++- +.++.+.++++++....+++|+
T Consensus 207 ~~~~a~~~~~~-l~~~~i~~i-----EqP~~~----~d~~~~~~l~~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~i 276 (401)
T 2hzg_A 207 DVEAAAARLPT-LDAAGVLWL-----EEPFDA----GALAAHAALAGRGARVRIAGGEAAHNFHMAQHLMDYGRIGFIQI 276 (401)
T ss_dssp CHHHHHTTHHH-HHHTTCSEE-----ECCSCT----TCHHHHHHHHTTCCSSEEEECTTCSSHHHHHHHHHHSCCSEEEE
T ss_pred CHHHHHHHHHH-HHhcCCCEE-----ECCCCc----cCHHHHHHHHhhCCCCCEEecCCcCCHHHHHHHHHCCCCCEEEe
Confidence 55554444433 677766643 344321 24667777776 555544433 4557888999988888888888
Q ss_pred ccCCccc-cchhchHHHHHHcCCcEEee
Q 025789 90 EYSLWTR-EIEDDIIPLCRELGIGIVAY 116 (248)
Q Consensus 90 ~~~~~~~-~~~~~~~~~~~~~gi~v~~~ 116 (248)
..+..-. ....++..+|+++|+.++..
T Consensus 277 k~~~~GGit~~~~i~~~A~~~g~~~~~h 304 (401)
T 2hzg_A 277 DCGRIGGLGPAKRVADAAQARGITYVNH 304 (401)
T ss_dssp CHHHHTSHHHHHHHHHHHHHHTCEEEEC
T ss_pred CcchhCCHHHHHHHHHHHHHcCCEEecC
Confidence 6554321 11256889999999999876
No 111
>2zc8_A N-acylamino acid racemase; octamer, TIM beta/alpha-barrel, metal-binding, metal binding; 1.95A {Thermus thermophilus}
Probab=56.48 E-value=14 Score=31.41 Aligned_cols=101 Identities=19% Similarity=0.111 Sum_probs=62.1
Q ss_pred CCHHHHHHHHHHHHhHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCccc-EEeccCCcHHHHHHHhccCCcceecc
Q 025789 11 GSPEYVRKCCEASLKRLDVDYIDLYYQHRVDTSVSIEDTMGELKKLVEEGKIK-YIGLSEASADTIRRAHAVHPITAVQM 89 (248)
Q Consensus 11 ~s~~~i~~~~e~SL~rL~~d~iDl~~lH~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvS~~~~~~l~~~~~~~~~~~~q~ 89 (248)
++.+. .+ +-+.|+.+++++|+ .|-+. +-++.+.+++++-.|. ..|=+-++...+.++++....+++|+
T Consensus 193 ~~~~~-~~-~~~~l~~~~i~~iE-----qP~~~----~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~i 261 (369)
T 2zc8_A 193 YSLAN-LA-QLKRLDELRLDYIE-----QPLAY----DDLLDHAKLQRELSTPICLDESLTGAEKARKAIELGAGRVFNV 261 (369)
T ss_dssp CCGGG-HH-HHHGGGGGCCSCEE-----CCSCT----TCSHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHHTCCSEEEE
T ss_pred CCHHH-HH-HHHHHHhCCCcEEE-----CCCCc----ccHHHHHHHHhhCCCCEEEcCccCCHHHHHHHHHhCCCCEEEE
Confidence 34444 33 33346666655544 55322 2355666677664443 44556678999999998888889988
Q ss_pred ccCCcccc-chhchHHHHHHcCCcEEeecccccc
Q 025789 90 EYSLWTRE-IEDDIIPLCRELGIGIVAYSPLGRG 122 (248)
Q Consensus 90 ~~~~~~~~-~~~~~~~~~~~~gi~v~~~~~l~~G 122 (248)
..+-.-.- ....+..+|+++|+.++.-+-+.++
T Consensus 262 k~~~~GGit~~~~i~~~A~~~g~~~~~~~~~es~ 295 (369)
T 2zc8_A 262 KPARLGGHGESLRVHALAESAGIPLWMGGMLEAG 295 (369)
T ss_dssp CHHHHTSHHHHHHHHHHHHHTTCCEEECCCCCCH
T ss_pred chhhhCCHHHHHHHHHHHHHcCCcEEecCccccH
Confidence 65542211 1257889999999996654444433
No 112
>3fv9_G Mandelate racemase/muconate lactonizing enzyme; structural genomics, mandelate racemase/muconatelactonizing hydrolase, PSI-2; 1.90A {Roseovarius nubinhibens ism} PDB: 2pce_A
Probab=56.41 E-value=27 Score=29.97 Aligned_cols=92 Identities=12% Similarity=0.003 Sum_probs=61.9
Q ss_pred HHhHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCcc-cEEeccCCcHHHHHHHhccCCcceeccccCCcccc-chh
Q 025789 23 SLKRLDVDYIDLYYQHRVDTSVSIEDTMGELKKLVEEGKI-KYIGLSEASADTIRRAHAVHPITAVQMEYSLWTRE-IED 100 (248)
Q Consensus 23 SL~rL~~d~iDl~~lH~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvS~~~~~~l~~~~~~~~~~~~q~~~~~~~~~-~~~ 100 (248)
-+++|. +..++ ++-.|-. .++.+.+++++-.| -..|=|-++...+.++++...++++|+..+..-.- ...
T Consensus 213 ~~~~l~-~~~~i-~iEeP~~------~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~a~d~v~~k~~~~GGit~~~ 284 (386)
T 3fv9_G 213 MLSLLP-PGLDI-VLEAPCA------SWAETKSLRARCALPLLLDELIQTETDLIAAIRDDLCDGVGLKVSKQGGITPML 284 (386)
T ss_dssp HHHHSC-SSCCC-EEECCCS------SHHHHHHHHTTCCSCEEESTTCCSHHHHHHHHHTTCCSEEEEEHHHHTSHHHHH
T ss_pred HHHHhh-ccCCc-EEecCCC------CHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHhCCCCEEEECccccCCHHHHH
Confidence 344553 23466 6666643 25566777766444 34566778889999999888888888866543211 125
Q ss_pred chHHHHHHcCCcEEeecccccc
Q 025789 101 DIIPLCRELGIGIVAYSPLGRG 122 (248)
Q Consensus 101 ~~~~~~~~~gi~v~~~~~l~~G 122 (248)
.+..+|+++|+.++..+.+.++
T Consensus 285 ~i~~~A~~~gi~~~~~~~~es~ 306 (386)
T 3fv9_G 285 RQRAIAAAAGMVMSVQDTVGSQ 306 (386)
T ss_dssp HHHHHHHHTTCEEEEECSSCCH
T ss_pred HHHHHHHHcCCEEEeCCCCCCH
Confidence 6889999999999987766554
No 113
>2ozt_A TLR1174 protein; structural genomics, O-succinylbenzoate synthase, PSI, protein structure initiative; 1.42A {Synechococcus elongatus} PDB: 3h7v_A
Probab=56.30 E-value=70 Score=26.61 Aligned_cols=104 Identities=16% Similarity=0.011 Sum_probs=65.0
Q ss_pred CCCHHHHHHHHHHHHhHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCcc-cEEeccCCcHHHHHHHhccCCcceec
Q 025789 10 KGSPEYVRKCCEASLKRLDVDYIDLYYQHRVDTSVSIEDTMGELKKLVEEGKI-KYIGLSEASADTIRRAHAVHPITAVQ 88 (248)
Q Consensus 10 ~~s~~~i~~~~e~SL~rL~~d~iDl~~lH~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvS~~~~~~l~~~~~~~~~~~~q 88 (248)
.++.+...+-+ +.|+.++ -.++.+|-.|-+... ++.+.+++++-.| -..|=|.++...+.++++....+++|
T Consensus 171 ~~~~~~A~~~~-~~l~~~~--~~~i~~iEqP~~~~d----~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~a~~~i~ 243 (332)
T 2ozt_A 171 SWDRATANRWF-AWLDRHG--NGKIEYVEQPLPPDQ----WQALLSLAQTVTTAIALDESVVSAAEVQRWVDRGWPGFFV 243 (332)
T ss_dssp CCCHHHHHHHH-HHHHHHC--CTTEEEEECCSCTTC----HHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHTTCCSEEE
T ss_pred CCCHHHHHHHH-HHHHhhc--cCCcceeECCCCCCC----HHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHhCCCCEEE
Confidence 34555554444 3355542 126777877754332 4455556554333 45566777888888888877777777
Q ss_pred cccCCccccchhchHHHHHHc--CCcEEeecccccc
Q 025789 89 MEYSLWTREIEDDIIPLCREL--GIGIVAYSPLGRG 122 (248)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~--gi~v~~~~~l~~G 122 (248)
+..+..-. . ..+..+|+.+ |+.++..+.+.++
T Consensus 244 ik~~~~GG-i-~~i~~~A~~~~~gi~~~~~~~~es~ 277 (332)
T 2ozt_A 244 IKTALFGD-P-DSLSLLLRRGLEPQRLVFSSALEGA 277 (332)
T ss_dssp ECHHHHSC-H-HHHHHHHHTTCCGGGEEEBCCSCCH
T ss_pred EChhhhCC-H-HHHHHHHHHhCCCCcEEEeCCcchH
Confidence 76444321 1 4678899999 9999887766543
No 114
>3eez_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, unknown function, PSI-2, protein structure initiative; 2.80A {Silicibacter pomeroyi}
Probab=56.09 E-value=14 Score=31.69 Aligned_cols=73 Identities=5% Similarity=-0.000 Sum_probs=51.9
Q ss_pred HHHHHHHHHcCccc-EEeccCCcHHHHHHHhccCCcceeccccCCccc-cchhchHHHHHHcCCcEEeecccccc
Q 025789 50 MGELKKLVEEGKIK-YIGLSEASADTIRRAHAVHPITAVQMEYSLWTR-EIEDDIIPLCRELGIGIVAYSPLGRG 122 (248)
Q Consensus 50 ~~~l~~l~~~G~ir-~iGvS~~~~~~l~~~~~~~~~~~~q~~~~~~~~-~~~~~~~~~~~~~gi~v~~~~~l~~G 122 (248)
++.+.++++.-.|- ..|=+-++...++++++...++++|+.....-. .....+..+|+++|+.++..+.+.++
T Consensus 226 ~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~ik~~~~GGit~~~~ia~~A~~~g~~~~~~~~~es~ 300 (378)
T 3eez_A 226 LDDIAAIRPLHSAPVSVDECLVTLQDAARVARDGLAEVFGIKLNRVGGLTRAARMRDIALTHGIDMFVMATGGSV 300 (378)
T ss_dssp HHHHHHTGGGCCCCEEECTTCCSHHHHHHHHHTTCCSEEEEEHHHHTSHHHHHHHHHHHHHTTCEEEEECSSCSH
T ss_pred HHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHcCCCCEEEeCchhcCCHHHHHHHHHHHHHcCCEEEcCCCCCCH
Confidence 55666676665553 344566788999999988888888886554321 11257889999999999987777654
No 115
>3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A*
Probab=56.01 E-value=78 Score=27.01 Aligned_cols=97 Identities=8% Similarity=-0.062 Sum_probs=62.5
Q ss_pred CCHHHHHHHHHHHHhHcCCCcccEEEeccCCCCCCHHHHHHHHHHHH-HcCccc-EEeccCCcHHHHHHHhccCCcceec
Q 025789 11 GSPEYVRKCCEASLKRLDVDYIDLYYQHRVDTSVSIEDTMGELKKLV-EEGKIK-YIGLSEASADTIRRAHAVHPITAVQ 88 (248)
Q Consensus 11 ~s~~~i~~~~e~SL~rL~~d~iDl~~lH~~~~~~~~~~~~~~l~~l~-~~G~ir-~iGvS~~~~~~l~~~~~~~~~~~~q 88 (248)
++.+...+ +-+.|+.+++++| ..|-.. +-++.+.+++ +.-.|- ..|=+-++...++++++...++++|
T Consensus 206 ~~~~~A~~-~~~~l~~~~i~~i-----EqP~~~----~d~~~~~~l~~~~~~iPIa~dE~i~~~~~~~~~i~~~~~d~v~ 275 (389)
T 3ozy_A 206 LGRHDALA-MLRILDEAGCYWF-----EEPLSI----DDIEGHRILRAQGTPVRIATGENLYTRNAFNDYIRNDAIDVLQ 275 (389)
T ss_dssp CCHHHHHH-HHHHHHHTTCSEE-----ESCSCT----TCHHHHHHHHTTCCSSEEEECTTCCHHHHHHHHHHTTCCSEEC
T ss_pred cCHHHHHH-HHHHHHhcCCCEE-----ECCCCc----ccHHHHHHHHhcCCCCCEEeCCCCCCHHHHHHHHHcCCCCEEE
Confidence 44444433 3345666665554 444332 2356677777 654453 3344567888999999888899999
Q ss_pred cccCCcccc-chhchHHHHHHcCCcEEeec
Q 025789 89 MEYSLWTRE-IEDDIIPLCRELGIGIVAYS 117 (248)
Q Consensus 89 ~~~~~~~~~-~~~~~~~~~~~~gi~v~~~~ 117 (248)
+..+..-.- ....+..+|+++|+.++..+
T Consensus 276 ik~~~~GGit~~~~ia~~A~~~gi~~~~h~ 305 (389)
T 3ozy_A 276 ADASRAGGITEALAISASAASAHLAWNPHT 305 (389)
T ss_dssp CCTTTSSCHHHHHHHHHHHHHTTCEECCCC
T ss_pred eCccccCCHHHHHHHHHHHHHcCCEEEecC
Confidence 977664321 12578899999999998774
No 116
>3tj4_A Mandelate racemase; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.50A {Agrobacterium tumefaciens} PDB: 4h19_A*
Probab=55.90 E-value=43 Score=28.46 Aligned_cols=82 Identities=13% Similarity=0.090 Sum_probs=58.0
Q ss_pred ccEEEeccCCCCCCHHHHHHHHHHHHHcCccc-EEeccCCcHHHHHHHhccCCcceeccccCCcccc-chhchHHHHHHc
Q 025789 32 IDLYYQHRVDTSVSIEDTMGELKKLVEEGKIK-YIGLSEASADTIRRAHAVHPITAVQMEYSLWTRE-IEDDIIPLCREL 109 (248)
Q Consensus 32 iDl~~lH~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvS~~~~~~l~~~~~~~~~~~~q~~~~~~~~~-~~~~~~~~~~~~ 109 (248)
.++.++..|-... -++.+.+++++-.|. ..|=|-++...+.++++...++++|+..+-.-.- ....+...|+++
T Consensus 223 ~~i~~iEqP~~~~----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~~k~~~~GGit~~~~ia~~A~~~ 298 (372)
T 3tj4_A 223 LDIYWFEEPLWYD----DVTSHARLARNTSIPIALGEQLYTVDAFRSFIDAGAVAYVQPDVTRLGGITEYIQVADLALAH 298 (372)
T ss_dssp SCEEEEESCSCTT----CHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCCSEECCCTTTTTHHHHHHHHHHHHHHT
T ss_pred cCCCEEECCCCch----hHHHHHHHHhhcCCCEEeCCCccCHHHHHHHHHcCCCCEEEeCccccCCHHHHHHHHHHHHHc
Confidence 4666777664432 356667777764443 5566778899999999988899999877654321 126789999999
Q ss_pred CCcEEeec
Q 025789 110 GIGIVAYS 117 (248)
Q Consensus 110 gi~v~~~~ 117 (248)
|+.++.++
T Consensus 299 gi~~~~h~ 306 (372)
T 3tj4_A 299 RLPVVPHA 306 (372)
T ss_dssp TCCBCCCC
T ss_pred CCEEEecC
Confidence 99998765
No 117
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=55.59 E-value=54 Score=27.14 Aligned_cols=104 Identities=14% Similarity=0.085 Sum_probs=59.1
Q ss_pred CCCCHHHHHHHHHHHHhHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCcccEEeccCCcHHHHHHHhccCCcceec
Q 025789 9 VKGSPEYVRKCCEASLKRLDVDYIDLYYQHRVDTSVSIEDTMGELKKLVEEGKIKYIGLSEASADTIRRAHAVHPITAVQ 88 (248)
Q Consensus 9 ~~~s~~~i~~~~e~SL~rL~~d~iDl~~lH~~~~~~~~~~~~~~l~~l~~~G~ir~iGvS~~~~~~l~~~~~~~~~~~~q 88 (248)
..++.+...+ +-+.|.++|+++|.+-..-.|.....+.+..+.+..+.+...++..++. -+...++.+.+.+ ++.+.
T Consensus 23 ~~~~~e~k~~-i~~~L~~~Gv~~IE~g~~~~~~~~p~~~d~~~~~~~~~~~~~~~~~~l~-~~~~~i~~a~~~g-~~~v~ 99 (307)
T 1ydo_A 23 VWIATEDKIT-WINQLSRTGLSYIEITSFVHPKWIPALRDAIDVAKGIDREKGVTYAALV-PNQRGLENALEGG-INEAC 99 (307)
T ss_dssp SCCCHHHHHH-HHHHHHTTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCCCTTCEEEEEC-CSHHHHHHHHHHT-CSEEE
T ss_pred CCCCHHHHHH-HHHHHHHcCCCEEEECCCcCcccccccCCHHHHHHHhhhcCCCeEEEEe-CCHHhHHHHHhCC-cCEEE
Confidence 4466666555 6667899999999998755543211112233334444444556666665 3566777776542 23333
Q ss_pred cc---------cCCcccc-----chhchHHHHHHcCCcEEe
Q 025789 89 ME---------YSLWTRE-----IEDDIIPLCRELGIGIVA 115 (248)
Q Consensus 89 ~~---------~~~~~~~-----~~~~~~~~~~~~gi~v~~ 115 (248)
+. .|+-... ...+.+.+++++|+.+.+
T Consensus 100 i~~~~sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~v~~ 140 (307)
T 1ydo_A 100 VFMSASETHNRKNINKSTSESLHILKQVNNDAQKANLTTRA 140 (307)
T ss_dssp EEEESSHHHHHTTTCSCHHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred EEeecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEE
Confidence 32 2221110 015678999999998864
No 118
>1wuf_A Hypothetical protein LIN2664; structural genomics, unknown function, nysgxrc target T2186, superfamily, protein structure initiative, PSI; 2.90A {Listeria innocua} SCOP: c.1.11.2 d.54.1.1
Probab=55.33 E-value=20 Score=30.84 Aligned_cols=87 Identities=15% Similarity=0.069 Sum_probs=59.8
Q ss_pred ccEEEeccCCCCCCHHHHHHHHHHHHHcCcc-cEEeccCCcHHHHHHHhccCCcceeccccCCcccc-chhchHHHHHHc
Q 025789 32 IDLYYQHRVDTSVSIEDTMGELKKLVEEGKI-KYIGLSEASADTIRRAHAVHPITAVQMEYSLWTRE-IEDDIIPLCREL 109 (248)
Q Consensus 32 iDl~~lH~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvS~~~~~~l~~~~~~~~~~~~q~~~~~~~~~-~~~~~~~~~~~~ 109 (248)
.++.+|-.|-... -++.+.+++++-.| -..|=|.++...+.++++....+++|+..+-.-.- ....+..+|+++
T Consensus 227 ~~i~~iEqP~~~~----d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~~~~ia~~A~~~ 302 (393)
T 1wuf_A 227 YDLEMIEQPFGTK----DFVDHAWLQKQLKTRICLDENIRSVKDVEQAHSIGSCRAINLKLARVGGMSSALKIAEYCALN 302 (393)
T ss_dssp GTCSEEECCSCSS----CSHHHHHHHTTCSSEEEECTTCCSHHHHHHHHHHTCCSEEEECTGGGTSHHHHHHHHHHHHHT
T ss_pred CCCeEEECCCCCc----CHHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHhCCCCEEEeChhhhCCHHHHHHHHHHHHHc
Confidence 4666777775432 24556666665444 34455677899999999888889999876654221 125788999999
Q ss_pred CCcEEeecccccc
Q 025789 110 GIGIVAYSPLGRG 122 (248)
Q Consensus 110 gi~v~~~~~l~~G 122 (248)
|+.++..+.+.+|
T Consensus 303 gi~~~~~~~~es~ 315 (393)
T 1wuf_A 303 EILVWCGGMLEAG 315 (393)
T ss_dssp TCEEEECCCCCCH
T ss_pred CCeEEecCCcccH
Confidence 9999877666544
No 119
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=54.99 E-value=20 Score=29.62 Aligned_cols=104 Identities=9% Similarity=0.020 Sum_probs=61.4
Q ss_pred CCCCHHHHHHHHHHHHhHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCcccEEeccCCcHHHHHHHhccCCcceec
Q 025789 9 VKGSPEYVRKCCEASLKRLDVDYIDLYYQHRVDTSVSIEDTMGELKKLVEEGKIKYIGLSEASADTIRRAHAVHPITAVQ 88 (248)
Q Consensus 9 ~~~s~~~i~~~~e~SL~rL~~d~iDl~~lH~~~~~~~~~~~~~~l~~l~~~G~ir~iGvS~~~~~~l~~~~~~~~~~~~q 88 (248)
..++.+...+ +-+.|.++|+++|.+-....|.....+.+..+.+..+.+...+...+.. -+.+.++.+++.+ ++.+.
T Consensus 25 ~~~~~e~k~~-i~~~L~~~Gv~~IE~g~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~-~~~~~i~~a~~aG-~~~v~ 101 (302)
T 2ftp_A 25 QPIEVADKIR-LVDDLSAAGLDYIEVGSFVSPKWVPQMAGSAEVFAGIRQRPGVTYAALA-PNLKGFEAALESG-VKEVA 101 (302)
T ss_dssp SCCCHHHHHH-HHHHHHHTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCCCTTSEEEEEC-CSHHHHHHHHHTT-CCEEE
T ss_pred CCCCHHHHHH-HHHHHHHcCcCEEEECCCcCccccccccCHHHHHHHhhhcCCCEEEEEe-CCHHHHHHHHhCC-cCEEE
Confidence 4566666555 5567899999999998754443111112333334444444556666655 4677888887753 44555
Q ss_pred cccCCcc--------cc------chhchHHHHHHcCCcEEe
Q 025789 89 MEYSLWT--------RE------IEDDIIPLCRELGIGIVA 115 (248)
Q Consensus 89 ~~~~~~~--------~~------~~~~~~~~~~~~gi~v~~ 115 (248)
+..+.-+ .. ...+.+++|+++|+.+.+
T Consensus 102 i~~~~s~~~~~~~~~~s~ee~l~~~~~~v~~a~~~G~~V~~ 142 (302)
T 2ftp_A 102 VFAAASEAFSQRNINCSIKDSLERFVPVLEAARQHQVRVRG 142 (302)
T ss_dssp EEEESCHHHHHHHHSSCHHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred EEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEE
Confidence 4322211 11 015678999999999864
No 120
>2vef_A Dihydropteroate synthase; antibiotic resistance, transferase, folate biosynthesis; 1.8A {Streptococcus pneumoniae} PDB: 2veg_A*
Probab=54.94 E-value=73 Score=26.53 Aligned_cols=109 Identities=14% Similarity=0.084 Sum_probs=61.3
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHhHcCCCcccEEEec-cCCCC-----CCHHHHHHHHHHHHHcCcccEEeccCCcHHH
Q 025789 1 MLDGVSIGVKGSPEYVRKCCEASLKRLDVDYIDLYYQH-RVDTS-----VSIEDTMGELKKLVEEGKIKYIGLSEASADT 74 (248)
Q Consensus 1 ~~~~~~~~~~~s~~~i~~~~e~SL~rL~~d~iDl~~lH-~~~~~-----~~~~~~~~~l~~l~~~G~ir~iGvS~~~~~~ 74 (248)
|.|+|.+ .+.+.+.+.. ..+..-|-|.||+=--- +|... ..++.+...++.+++.-. --|.|-++.++.
T Consensus 23 Fsdgg~~---~~~~~a~~~a-~~~v~~GAdIIDIGgeSTrPGa~~v~~~eE~~Rv~pvI~~l~~~~~-vpiSIDT~~~~V 97 (314)
T 2vef_A 23 FSDGGQF---FALEQALQQA-RKLIAEGASMLDIGGESTRPGSSYVEIEEEIQRVVPVIKAIRKESD-VLISIDTWKSQV 97 (314)
T ss_dssp ----------CHHHHHHHHH-HHHHHTTCSEEEEECCC-----CHHHHHHHHHHHHHHHHHHHHHCC-CEEEEECSCHHH
T ss_pred CCCCCCC---CCHHHHHHHH-HHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhhCC-ceEEEeCCCHHH
Confidence 5566654 2455555544 34455688888886532 23321 112235666666766522 257888999999
Q ss_pred HHHHhccCCcceeccccCCccccchhchHHHHHHcCCcEEeecc
Q 025789 75 IRRAHAVHPITAVQMEYSLWTREIEDDIIPLCRELGIGIVAYSP 118 (248)
Q Consensus 75 l~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~gi~v~~~~~ 118 (248)
++++++.+..-++ ..+-... ..++++.++++|.+++.+..
T Consensus 98 a~aAl~aGa~iIN--DVsg~~~--d~~m~~v~a~~~~~vvlmh~ 137 (314)
T 2vef_A 98 AEAALAAGADLVN--DITGLMG--DEKMPHVVAEARAQVVIMFN 137 (314)
T ss_dssp HHHHHHTTCCEEE--ETTTTCS--CTTHHHHHHHHTCEEEEECC
T ss_pred HHHHHHcCCCEEE--ECCCCCC--ChHHHHHHHHcCCCEEEEec
Confidence 9999987542222 2232222 25789999999999998753
No 121
>3my9_A Muconate cycloisomerase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics, nysgx; 2.20A {Azorhizobium caulinodans}
Probab=54.54 E-value=25 Score=30.05 Aligned_cols=93 Identities=6% Similarity=0.013 Sum_probs=59.1
Q ss_pred HHHHhHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCcc-cEEeccCCcHHHHHHHhccCCcceeccccCCccc-cc
Q 025789 21 EASLKRLDVDYIDLYYQHRVDTSVSIEDTMGELKKLVEEGKI-KYIGLSEASADTIRRAHAVHPITAVQMEYSLWTR-EI 98 (248)
Q Consensus 21 e~SL~rL~~d~iDl~~lH~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvS~~~~~~l~~~~~~~~~~~~q~~~~~~~~-~~ 98 (248)
-+.|+.+++++| ..|-.. +-++.+.+++++-.| -..|=|-++..++.++++....+++|+..+..-. ..
T Consensus 211 ~~~l~~~~i~~i-----EqP~~~----~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~~k~~~~GGit~ 281 (377)
T 3my9_A 211 LRDVDAFRPTFI-----EQPVPR----RHLDAMAGFAAALDTPILADESCFDAVDLMEVVRRQAADAISVKIMKCGGLMK 281 (377)
T ss_dssp HHHHHTTCCSCE-----ECCSCT----TCHHHHHHHHHHCSSCEEESTTCSSHHHHHHHHHHTCCSEEECCHHHHTSHHH
T ss_pred HHHHhhcCCCEE-----ECCCCc----cCHHHHHHHHHhCCCCEEECCccCCHHHHHHHHHcCCCCEEEecccccCCHHH
Confidence 344555555544 344322 235667777776444 3445567789999999888888888886554321 11
Q ss_pred hhchHHHHHHcCCcEEeecccccc
Q 025789 99 EDDIIPLCRELGIGIVAYSPLGRG 122 (248)
Q Consensus 99 ~~~~~~~~~~~gi~v~~~~~l~~G 122 (248)
...+..+|+++|+.++..+.+.+|
T Consensus 282 ~~~i~~~a~~~gi~~~~~~~~es~ 305 (377)
T 3my9_A 282 AQSLMAIADTAGLPGYGGTLWEGG 305 (377)
T ss_dssp HHHHHHHHHHHTCCEECCEECCSH
T ss_pred HHHHHHHHHHcCCeEecCCCCCcH
Confidence 256889999999999765555443
No 122
>3dip_A Enolase; structural genomics, isomerase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, NYSGXRC, lyase; HET: SIC; 2.50A {Unidentified}
Probab=54.18 E-value=24 Score=30.57 Aligned_cols=69 Identities=10% Similarity=0.060 Sum_probs=49.3
Q ss_pred HHHHHHHHHcCcc-cEEeccCCcHHHHHHHhccCCcceeccccCCcccc-chhchHHHHHHcCCcEEeecc
Q 025789 50 MGELKKLVEEGKI-KYIGLSEASADTIRRAHAVHPITAVQMEYSLWTRE-IEDDIIPLCRELGIGIVAYSP 118 (248)
Q Consensus 50 ~~~l~~l~~~G~i-r~iGvS~~~~~~l~~~~~~~~~~~~q~~~~~~~~~-~~~~~~~~~~~~gi~v~~~~~ 118 (248)
++.+.+++++-.| -..|=|-++...++++++....+++|+..+..-.- ....+..+|+++|+.++..+.
T Consensus 254 ~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~~ 324 (410)
T 3dip_A 254 IPAVADLRRQTRAPICGGENLAGTRRFHEMLCADAIDFVMLDLTWCGGLSEGRKIAALAETHARPLAPHXT 324 (410)
T ss_dssp HHHHHHHHHHHCCCEEECTTCCSHHHHHHHHHTTCCSEEEECTTTSSCHHHHHHHHHHHHHTTCCEEECSS
T ss_pred HHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcCCCCeEeecccccCCHHHHHHHHHHHHHcCCEEeeeCc
Confidence 4455566655334 34455677888899998888889999987764321 125688999999999988766
No 123
>2gdq_A YITF; mandelate racemase/muconate lactonizing enzyme, TIM-barrel, octamer, structural genomics, PSI; 1.80A {Bacillus subtilis subsp} SCOP: c.1.11.2 d.54.1.1 PDB: 2gge_A
Probab=53.64 E-value=35 Score=29.08 Aligned_cols=80 Identities=11% Similarity=0.014 Sum_probs=54.0
Q ss_pred cEEEeccCCCCCCHHHHHHHHHHHHHcCcccEE-eccCCcHHHHHHHhccCCcceeccccCCcccc-chhchHHHHHHcC
Q 025789 33 DLYYQHRVDTSVSIEDTMGELKKLVEEGKIKYI-GLSEASADTIRRAHAVHPITAVQMEYSLWTRE-IEDDIIPLCRELG 110 (248)
Q Consensus 33 Dl~~lH~~~~~~~~~~~~~~l~~l~~~G~ir~i-GvS~~~~~~l~~~~~~~~~~~~q~~~~~~~~~-~~~~~~~~~~~~g 110 (248)
++.++..|-+. +.++.+.+++++-.|--. |=+.++...++++++....+++|+..+-.-.- ....+..+|+++|
T Consensus 212 ~i~~iEqP~~~----~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g 287 (382)
T 2gdq_A 212 NIGWLEEPLPF----DQPQDYAMLRSRLSVPVAGGENMKGPAQYVPLLSQRCLDIIQPDVMHVNGIDEFRDCLQLARYFG 287 (382)
T ss_dssp CEEEEECCSCS----SCHHHHHHHHTTCSSCEEECTTCCSHHHHHHHHHTTCCSEECCCTTTTTHHHHHHHHHHHHHHHT
T ss_pred CCeEEECCCCc----ccHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcCCCCEEecCccccCCHHHHHHHHHHHHHcC
Confidence 44455555432 235666677766555433 44556788999999888889998877654221 1257889999999
Q ss_pred CcEEee
Q 025789 111 IGIVAY 116 (248)
Q Consensus 111 i~v~~~ 116 (248)
+.++..
T Consensus 288 ~~~~~~ 293 (382)
T 2gdq_A 288 VRASAH 293 (382)
T ss_dssp CEECCC
T ss_pred CEEeec
Confidence 999887
No 124
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=53.37 E-value=37 Score=29.01 Aligned_cols=92 Identities=16% Similarity=0.010 Sum_probs=60.7
Q ss_pred CCHHHHHHHHHHHHhH--cCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcC-cccEE-eccCCcHHHHHHHhccCCcce
Q 025789 11 GSPEYVRKCCEASLKR--LDVDYIDLYYQHRVDTSVSIEDTMGELKKLVEEG-KIKYI-GLSEASADTIRRAHAVHPITA 86 (248)
Q Consensus 11 ~s~~~i~~~~e~SL~r--L~~d~iDl~~lH~~~~~~~~~~~~~~l~~l~~~G-~ir~i-GvS~~~~~~l~~~~~~~~~~~ 86 (248)
++.+...+-++. |+. ++++ ++..|-.. +-++.+.++++.- .|--+ |=+- +.+.++++++....++
T Consensus 201 ~~~~~a~~~~~~-l~~~g~~i~-----~iEqP~~~----~~~~~~~~l~~~~~~iPIa~dE~~-~~~~~~~~i~~~~~d~ 269 (389)
T 2oz8_A 201 WTSKEALTKLVA-IREAGHDLL-----WVEDPILR----HDHDGLRTLRHAVTWTQINSGEYL-DLQGKRLLLEAHAADI 269 (389)
T ss_dssp BCHHHHHHHHHH-HHHTTCCCS-----EEESCBCT----TCHHHHHHHHHHCCSSEEEECTTC-CHHHHHHHHHTTCCSE
T ss_pred CCHHHHHHHHHH-HHhcCCCce-----EEeCCCCC----cCHHHHHHHHhhCCCCCEEeCCCC-CHHHHHHHHHcCCCCE
Confidence 456665554443 777 4443 45555322 2466777777764 55433 3355 8899999999888999
Q ss_pred eccccCCccccchhchHHHHHHcCCcEEee
Q 025789 87 VQMEYSLWTREIEDDIIPLCRELGIGIVAY 116 (248)
Q Consensus 87 ~q~~~~~~~~~~~~~~~~~~~~~gi~v~~~ 116 (248)
+|+. .=+.. ...+..+|+++|+.++..
T Consensus 270 v~ik-GGit~--a~~i~~~A~~~gi~~~~~ 296 (389)
T 2oz8_A 270 LNVH-GQVTD--VMRIGWLAAELGIPISIG 296 (389)
T ss_dssp EEEC-SCHHH--HHHHHHHHHHHTCCEEEC
T ss_pred EEEC-cCHHH--HHHHHHHHHHcCCeEeec
Confidence 9998 21111 257889999999999988
No 125
>3mkc_A Racemase; metabolic process, PSI2, NYSGXRC, structu genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.77A {Pseudovibrio SP} PDB: 3nzg_A
Probab=52.94 E-value=50 Score=28.31 Aligned_cols=69 Identities=10% Similarity=0.018 Sum_probs=49.8
Q ss_pred HHHHHHHHHcCccc-EEeccCCcHHHHHHHhccCCcceeccccCCcccc-chhchHHHHHHcCCcEEeecc
Q 025789 50 MGELKKLVEEGKIK-YIGLSEASADTIRRAHAVHPITAVQMEYSLWTRE-IEDDIIPLCRELGIGIVAYSP 118 (248)
Q Consensus 50 ~~~l~~l~~~G~ir-~iGvS~~~~~~l~~~~~~~~~~~~q~~~~~~~~~-~~~~~~~~~~~~gi~v~~~~~ 118 (248)
++.+.+++++-.|. ..|=|-++...++++++...++++|+...-.-.- ....+...|+.+|+.++..+.
T Consensus 246 ~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~~ 316 (394)
T 3mkc_A 246 LSGHAKLVENTRSRICGAEMSTTRFEAEEWITKGKVHLLQSDYNRCGGLTELRRITEMATANNVQVMPHNW 316 (394)
T ss_dssp HHHHHHHHHHCSSCBEECTTCCHHHHHHHHHHTTCCSEECCCTTTTTHHHHHHHHHHHHHHTTCEECCCCC
T ss_pred HHHHHHHHhhCCCCEEeCCCCCCHHHHHHHHHcCCCCeEecCccccCCHHHHHHHHHHHHHcCCEEeecCC
Confidence 45666777665553 4455667888999999888899999877664321 125688999999999987653
No 126
>1tzz_A Hypothetical protein L1841; structural genomics, mandelate racemase like fold, nysgxrc target T1523, PSI, protein structure initiative; 1.86A {Bradyrhizobium japonicum} SCOP: c.1.11.2 d.54.1.1 PDB: 2dw7_A* 2dw6_A*
Probab=51.60 E-value=38 Score=28.95 Aligned_cols=97 Identities=11% Similarity=-0.049 Sum_probs=60.8
Q ss_pred CCHHHHHHHHHHHHhHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCcccEE-eccCCcHHHHHHHhccC----Ccc
Q 025789 11 GSPEYVRKCCEASLKRLDVDYIDLYYQHRVDTSVSIEDTMGELKKLVEEGKIKYI-GLSEASADTIRRAHAVH----PIT 85 (248)
Q Consensus 11 ~s~~~i~~~~e~SL~rL~~d~iDl~~lH~~~~~~~~~~~~~~l~~l~~~G~ir~i-GvS~~~~~~l~~~~~~~----~~~ 85 (248)
++.+...+-++. |+.+++++ +..|-.. +-++.+.+++++-.|--. |=+-++...++++++.. ..+
T Consensus 221 ~~~~~a~~~~~~-l~~~~i~~-----iEqP~~~----~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~~~~~d 290 (392)
T 1tzz_A 221 FNLETGIAYAKM-LRDYPLFW-----YEEVGDP----LDYALQAALAEFYPGPMATGENLFSHQDARNLLRYGGMRPDRD 290 (392)
T ss_dssp CCHHHHHHHHHH-HTTSCCSE-----EECCSCT----TCHHHHHHHTTTCCSCEEECTTCCSHHHHHHHHHHSCCCTTTC
T ss_pred CCHHHHHHHHHH-HHHcCCCe-----ecCCCCh----hhHHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHcCCCccCCc
Confidence 455555444333 66665554 3444321 246666777766555433 33456788888888877 788
Q ss_pred eeccccCCcccc-chhchHHHHHHcCCc---EEeec
Q 025789 86 AVQMEYSLWTRE-IEDDIIPLCRELGIG---IVAYS 117 (248)
Q Consensus 86 ~~q~~~~~~~~~-~~~~~~~~~~~~gi~---v~~~~ 117 (248)
++|+..+..-.- ....+..+|+++|+. ++..+
T Consensus 291 ~v~ik~~~~GGit~~~~i~~~A~~~gi~~~~~~~~~ 326 (392)
T 1tzz_A 291 WLQFDCALSYGLCEYQRTLEVLKTHGWSPSRCIPHG 326 (392)
T ss_dssp EECCCTTTTTCHHHHHHHHHHHHHTTCCGGGBCCSC
T ss_pred EEEECccccCCHHHHHHHHHHHHHCCCCCceEeecH
Confidence 888876654321 125788999999999 87764
No 127
>2fkn_A Urocanate hydratase; rossman fold, lyase; HET: NAD; 2.20A {Bacillus subtilis}
Probab=51.55 E-value=52 Score=29.38 Aligned_cols=58 Identities=24% Similarity=0.189 Sum_probs=47.7
Q ss_pred HHhHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCcccEEeccCCcHHHHHHHhcc-CCccee
Q 025789 23 SLKRLDVDYIDLYYQHRVDTSVSIEDTMGELKKLVEEGKIKYIGLSEASADTIRRAHAV-HPITAV 87 (248)
Q Consensus 23 SL~rL~~d~iDl~~lH~~~~~~~~~~~~~~l~~l~~~G~ir~iGvS~~~~~~l~~~~~~-~~~~~~ 87 (248)
.-+|+.+.|+|.+- ..++++++..++.+++|+...||+-..-.+.++++.+. ..+|++
T Consensus 199 i~~R~~~gyld~~~-------~~ldeal~~~~~a~~~~~~~SIg~~GNaadv~~~l~~~~i~~Dlv 257 (552)
T 2fkn_A 199 IDKRIETKYCDRKT-------ASIEEALAWAEEAKLAGKPLSIALLGNAAEVHHTLLNRGVKIDIV 257 (552)
T ss_dssp HHHHHHTTSCSEEE-------SCHHHHHHHHHHHHHTTCCEEEEEESCHHHHHHHHHTTTCCCSEE
T ss_pred HHHHHhCCcceeEc-------CCHHHHHHHHHHHHHcCCceEEEEeccHHHHHHHHHHCCCCCCCC
Confidence 34678888999864 35899999999999999999999999999999998876 344444
No 128
>4e4u_A Mandalate racemase/muconate lactonizing enzyme; mandelate racemase, aldolase, structural genomics, biology; 1.35A {Unidentified}
Probab=51.06 E-value=1.2e+02 Score=26.11 Aligned_cols=68 Identities=9% Similarity=-0.011 Sum_probs=48.9
Q ss_pred HHHHHHHHHcCccc-EEeccCCcHHHHHHHhccCCcceeccccCCcccc-chhchHHHHHHcCCcEEeec
Q 025789 50 MGELKKLVEEGKIK-YIGLSEASADTIRRAHAVHPITAVQMEYSLWTRE-IEDDIIPLCRELGIGIVAYS 117 (248)
Q Consensus 50 ~~~l~~l~~~G~ir-~iGvS~~~~~~l~~~~~~~~~~~~q~~~~~~~~~-~~~~~~~~~~~~gi~v~~~~ 117 (248)
++.+.++++.-.|- ..|=|-++...++++++....+++|+..+-.-.- ....+...|+.+|+.++.+.
T Consensus 241 ~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~d~~~~GGit~~~kia~~A~~~gi~v~~h~ 310 (412)
T 4e4u_A 241 EEAIAQVAKHTSIPIATGERLTTKYEFHKLLQAGGASILQLNVARVGGLLEAKKIATLAEVHYAQIAPHL 310 (412)
T ss_dssp HHHHHHHHHTCSSCEEECTTCCHHHHHHHHHHTTCCSEECCCTTTTTSHHHHHHHHHHHHHTTCEECCCC
T ss_pred HHHHHHHHhhCCCCEEecCccCCHHHHHHHHHcCCCCEEEeCccccCCHHHHHHHHHHHHHcCCEEEecC
Confidence 56667777765553 3455667888889998888889999877654321 12578899999999987764
No 129
>1x87_A Urocanase protein; structural genomics, protein STR initiative, MCSG, PSI, midwest center for structural genomi; HET: MSE NAD; 2.40A {Geobacillus stearothermophilus} SCOP: e.51.1.1
Probab=50.59 E-value=52 Score=29.37 Aligned_cols=57 Identities=25% Similarity=0.335 Sum_probs=47.2
Q ss_pred HhHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCcccEEeccCCcHHHHHHHhcc-CCccee
Q 025789 24 LKRLDVDYIDLYYQHRVDTSVSIEDTMGELKKLVEEGKIKYIGLSEASADTIRRAHAV-HPITAV 87 (248)
Q Consensus 24 L~rL~~d~iDl~~lH~~~~~~~~~~~~~~l~~l~~~G~ir~iGvS~~~~~~l~~~~~~-~~~~~~ 87 (248)
-+|+.+.|+|.+- ..++++++..++.+++|+...||+-..-.+.++++.+. ..+|++
T Consensus 199 ~~R~~~gyld~~~-------~~ldeal~~~~~a~~~~~~~SIg~~GNaadv~~~l~~~~i~~Dlv 256 (551)
T 1x87_A 199 QRRIDTNYLDTMT-------DSLDAALEMAKQAKEEKKALSIGLVGNAAEVLPRLVETGFVPDVL 256 (551)
T ss_dssp HHHHHTTSCSEEE-------SCHHHHHHHHHHHHHTTCCEEEEEESCHHHHHHHHHHTTCCCSEE
T ss_pred HHHHhCCCceeEc-------CCHHHHHHHHHHHHHcCCceEEEEeccHHHHHHHHHHCCCCCCCC
Confidence 4678888999864 35899999999999999999999999999999998776 344444
No 130
>4djd_D C/Fe-SP, corrinoid/iron-sulfur protein small subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_D* 4djf_D*
Probab=50.23 E-value=46 Score=27.96 Aligned_cols=93 Identities=14% Similarity=0.191 Sum_probs=58.8
Q ss_pred HHHHhHcCCCcccEEEe-ccCCC-CCCHHHHHHHHHHHHHcCcccEEecc-----CCcHHHHHHHhccC---Ccceeccc
Q 025789 21 EASLKRLDVDYIDLYYQ-HRVDT-SVSIEDTMGELKKLVEEGKIKYIGLS-----EASADTIRRAHAVH---PITAVQME 90 (248)
Q Consensus 21 e~SL~rL~~d~iDl~~l-H~~~~-~~~~~~~~~~l~~l~~~G~ir~iGvS-----~~~~~~l~~~~~~~---~~~~~q~~ 90 (248)
.+..+..|.|.||+-.- -+|+. ....++..+.++.+++.-. --|.+- +++++.++++++.. ...++-+.
T Consensus 87 ~~~v~~~GAdiIDIg~eStrP~~~~vs~ee~~~~V~~v~~~~~-vPlsIDg~~~~T~~~eV~eaAleagag~~~lINsv~ 165 (323)
T 4djd_D 87 QKCVAEYGADLIYLKLDGADPEGANHSVDQCVATVKEVLQAVG-VPLVVVGCGDVEKDHEVLEAVAEAAAGENLLLGNAE 165 (323)
T ss_dssp HHHHHTTCCSEEEEECGGGCTTTTCCCHHHHHHHHHHHHHHCC-SCEEEECCSCHHHHHHHHHHHHHHTTTSCCEEEEEB
T ss_pred HHHHHHcCCCEEEEcCccCCCCCCCCCHHHHHHHHHHHHhhCC-ceEEEECCCCCCCCHHHHHHHHHhcCCCCCeEEECC
Confidence 33336789999998644 34442 3456677777777776522 124444 55678888887764 22333222
Q ss_pred cCCccccchhchHHHHHHcCCcEEeeccc
Q 025789 91 YSLWTREIEDDIIPLCRELGIGIVAYSPL 119 (248)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~gi~v~~~~~l 119 (248)
.. + ..++.+.++++|..++.+.|.
T Consensus 166 ~~----~-~~~m~~laa~~g~~vVlmh~~ 189 (323)
T 4djd_D 166 QE----N-YKSLTAACMVHKHNIIARSPL 189 (323)
T ss_dssp TT----B-CHHHHHHHHHHTCEEEEECSS
T ss_pred cc----c-HHHHHHHHHHhCCeEEEEccc
Confidence 21 1 257899999999999998863
No 131
>4e5t_A Mandelate racemase / muconate lactonizing enzyme, terminal domain protein; aldolase, structural genomics, biology; 2.90A {Labrenzia alexandrii}
Probab=50.19 E-value=53 Score=28.28 Aligned_cols=68 Identities=10% Similarity=0.022 Sum_probs=48.6
Q ss_pred HHHHHHHHHcCccc-EEeccCCcHHHHHHHhccCCcceeccccCCcccc-chhchHHHHHHcCCcEEeec
Q 025789 50 MGELKKLVEEGKIK-YIGLSEASADTIRRAHAVHPITAVQMEYSLWTRE-IEDDIIPLCRELGIGIVAYS 117 (248)
Q Consensus 50 ~~~l~~l~~~G~ir-~iGvS~~~~~~l~~~~~~~~~~~~q~~~~~~~~~-~~~~~~~~~~~~gi~v~~~~ 117 (248)
++.+.++++.-.|. ..|=|-++...++++++....+++|+..+-.-.- ....+...|+.+|+.++.++
T Consensus 248 ~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~d~~~~GGit~~~~ia~~A~~~gi~~~~h~ 317 (404)
T 4e5t_A 248 PEDMAEVARYTSIPVATGERLCTKYEFSRVLETGAASILQMNLGRVGGLLEAKKIAAMAECHSAQIAPHL 317 (404)
T ss_dssp HHHHHHHHHHCSSCEEECTTCCHHHHHHHHHHHTCCSEECCCTTTSSCHHHHHHHHHHHHHTTCEECCCC
T ss_pred HHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHhCCCCEEecCccccCCHHHHHHHHHHHHHcCCEEeecC
Confidence 45666777664453 3444667888888998888889999877664321 12578899999999987764
No 132
>2chr_A Chloromuconate cycloisomerase; 3.00A {Cupriavidus necator} SCOP: c.1.11.2 d.54.1.1
Probab=50.07 E-value=17 Score=30.92 Aligned_cols=73 Identities=10% Similarity=0.088 Sum_probs=53.0
Q ss_pred HHHHHHHHHcCcc-cEEeccCCcHHHHHHHhccCCcceeccccCCcccc-chhchHHHHHHcCCcEEeecccccc
Q 025789 50 MGELKKLVEEGKI-KYIGLSEASADTIRRAHAVHPITAVQMEYSLWTRE-IEDDIIPLCRELGIGIVAYSPLGRG 122 (248)
Q Consensus 50 ~~~l~~l~~~G~i-r~iGvS~~~~~~l~~~~~~~~~~~~q~~~~~~~~~-~~~~~~~~~~~~gi~v~~~~~l~~G 122 (248)
++.+.+++++-.| -..|=|.++...+.++++...++++|+.....-.- ....+..+|+++|+.++..+.+.++
T Consensus 228 ~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~~~a~d~i~~d~~~~GGit~~~~ia~~A~~~gi~~~~~~~~~~~ 302 (370)
T 2chr_A 228 TQALRRLSDNNRVAIMADESLSTLASAFDLARDRSVDVFSLKLCNMGGVSATQKIAAVAEASGIASYGGTMLDST 302 (370)
T ss_dssp HHHHHHHHHHCSSEEEESSSCCSHHHHHHHHTTTCCSEECCCHHHHTSHHHHHHHHHHHHHHTCEECCCCCSCCH
T ss_pred hhhhhHHhhhccCCccCCccCCCHHHHHHHHHcCCCcEEEeCCcccCCHHHHHHHHHHHHHcCCeEEeCCCcccH
Confidence 5667777777665 35566778899999999888888888865443211 1267889999999999877766554
No 133
>1t57_A Conserved protein MTH1675; structural genomics, FMN; HET: FMN; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.49.1.2
Probab=50.06 E-value=88 Score=24.29 Aligned_cols=87 Identities=20% Similarity=0.171 Sum_probs=51.9
Q ss_pred EEEeccCCCCCCHHHHH-HHHHHHHHcCcccEEeccCCcHHHHHHHhccC--CcceeccccCCcc---ccchhchHHHHH
Q 025789 34 LYYQHRVDTSVSIEDTM-GELKKLVEEGKIKYIGLSEASADTIRRAHAVH--PITAVQMEYSLWT---REIEDDIIPLCR 107 (248)
Q Consensus 34 l~~lH~~~~~~~~~~~~-~~l~~l~~~G~ir~iGvS~~~~~~l~~~~~~~--~~~~~q~~~~~~~---~~~~~~~~~~~~ 107 (248)
++|.-.|..+. .++++ -+.+++++.| |++|=|.+.+.+-..++.+.. .+.+|--.+..-. ..+..+.....+
T Consensus 25 i~YF~~~G~eN-T~~tl~la~era~e~~-Ik~iVVASssG~TA~k~~e~~~~~lVvVTh~~GF~~pg~~e~~~e~~~~L~ 102 (206)
T 1t57_A 25 ICYFEEPGKEN-TERVLELVGERADQLG-IRNFVVASVSGETALRLSEMVEGNIVSVTHHAGFREKGQLELEDEARDALL 102 (206)
T ss_dssp EEEESSCSGGG-HHHHHHHHHHHHHHHT-CCEEEEECSSSHHHHHHHTTCCSEEEEECCCTTSSSTTCCSSCHHHHHHHH
T ss_pred EEEecCCCccc-HHHHHHHHHHHHHHcC-CCEEEEEeCCCHHHHHHHHHccCCEEEEeCcCCCCCCCCCcCCHHHHHHHH
Confidence 56666665543 44555 4455555555 899988877655555555533 3333322222211 123478899999
Q ss_pred HcCCcEEeecccccc
Q 025789 108 ELGIGIVAYSPLGRG 122 (248)
Q Consensus 108 ~~gi~v~~~~~l~~G 122 (248)
+.|+.++..+=+.+|
T Consensus 103 ~~G~~V~t~tH~lsG 117 (206)
T 1t57_A 103 ERGVNVYAGSHALSG 117 (206)
T ss_dssp HHTCEEECCSCTTTT
T ss_pred hCCCEEEEeeccccc
Confidence 999999876555545
No 134
>3sjn_A Mandelate racemase/muconate lactonizing protein; enolase, magnesium binding site, lyase; 1.90A {Shewanella pealeana}
Probab=49.92 E-value=36 Score=28.99 Aligned_cols=69 Identities=13% Similarity=-0.001 Sum_probs=50.1
Q ss_pred HHHHHHHHHcCccc-EEeccCCcHHHHHHHhccCCcceeccccCCcccc-chhchHHHHHHcCCcEEeecc
Q 025789 50 MGELKKLVEEGKIK-YIGLSEASADTIRRAHAVHPITAVQMEYSLWTRE-IEDDIIPLCRELGIGIVAYSP 118 (248)
Q Consensus 50 ~~~l~~l~~~G~ir-~iGvS~~~~~~l~~~~~~~~~~~~q~~~~~~~~~-~~~~~~~~~~~~gi~v~~~~~ 118 (248)
++.+.++++.-.|- ..|=+-++...++++++...++++|+..+..-.- ....+...|+.+|+.++..+.
T Consensus 234 ~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~~ 304 (374)
T 3sjn_A 234 LISYEKLSRQVSQKIAGGESLTTRYEFQEFITKSNADIVQPDITRCGGITEMKKIYDIAQMNGTQLIPHGF 304 (374)
T ss_dssp HHHHHHHHHHCSSEEEECTTCCHHHHHHHHHHHHCCSEECCBTTTSSHHHHHHHHHHHHHHHTCEECCBCC
T ss_pred HHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHcCCCCEEEeCccccCCHHHHHHHHHHHHHcCCEEEecCC
Confidence 56677777765453 4455667888899988888888998877664321 125788999999999988766
No 135
>4hpn_A Putative uncharacterized protein; enolase, enzyme function initiative, EFI, structural genomic isomerase; 1.60A {Agrobacterium tumefaciens} PDB: 4ggb_A
Probab=49.91 E-value=48 Score=28.10 Aligned_cols=67 Identities=13% Similarity=0.033 Sum_probs=49.4
Q ss_pred HHHHHHHHHcCcc-cEEeccCCcHHHHHHHhccCCcceeccccCCcccc-chhchHHHHHHcCCcEEee
Q 025789 50 MGELKKLVEEGKI-KYIGLSEASADTIRRAHAVHPITAVQMEYSLWTRE-IEDDIIPLCRELGIGIVAY 116 (248)
Q Consensus 50 ~~~l~~l~~~G~i-r~iGvS~~~~~~l~~~~~~~~~~~~q~~~~~~~~~-~~~~~~~~~~~~gi~v~~~ 116 (248)
++.+.+++++-.+ -..|=|.++...+.++++...++++|+...-.-.- ....+...|+++|+.++.+
T Consensus 228 ~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~a~d~i~~d~~~~GGit~~~~ia~~A~~~gi~v~~h 296 (378)
T 4hpn_A 228 LDAYARVRAGQPIPVAGGETWHGRYGMWQALSAGAVDILQPDLCGCGGFSEIQKIATLATLHGVRIVPH 296 (378)
T ss_dssp HHHHHHHHHHSSSCEEECTTCCHHHHHHHHHHTTCCSEECCBTTTTTHHHHHHHHHHHHHHHTCEECCB
T ss_pred hhhhHHHHhhCCceeeCCcCccchHhHHHHHHcCCCCEEeeCCeeCCChhHHHHHHHHHHHcCCeEEeC
Confidence 5666777766555 45577888999999999988899998876653321 1267889999999998654
No 136
>3l9c_A 3-dehydroquinate dehydratase; AROD, amino-acid biosynthesis, aromatic amino acid biosynthe schiff base, lyase; 1.60A {Streptococcus mutans}
Probab=49.54 E-value=47 Score=26.86 Aligned_cols=26 Identities=23% Similarity=0.079 Sum_probs=19.7
Q ss_pred CCCHHHHHHHHHHHHhHcCCCcccEE
Q 025789 10 KGSPEYVRKCCEASLKRLDVDYIDLY 35 (248)
Q Consensus 10 ~~s~~~i~~~~e~SL~rL~~d~iDl~ 35 (248)
..+.+.-.+-++..++.++.||||+=
T Consensus 105 ~~~~~~y~~ll~~~~~~~~~dyIDVE 130 (259)
T 3l9c_A 105 SLSNEDYLAIIRDIAALYQPDYIDFE 130 (259)
T ss_dssp CCCHHHHHHHHHHHHHHHCCSEEEEE
T ss_pred CCCHHHHHHHHHHHHHhcCCCEEEEE
Confidence 45566666677777777999999984
No 137
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=49.07 E-value=98 Score=26.13 Aligned_cols=96 Identities=11% Similarity=-0.016 Sum_probs=60.1
Q ss_pred CCHHHHHHHHHHHHhHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCcccEE-eccCCc-HHHHHHHhccCCcceec
Q 025789 11 GSPEYVRKCCEASLKRLDVDYIDLYYQHRVDTSVSIEDTMGELKKLVEEGKIKYI-GLSEAS-ADTIRRAHAVHPITAVQ 88 (248)
Q Consensus 11 ~s~~~i~~~~e~SL~rL~~d~iDl~~lH~~~~~~~~~~~~~~l~~l~~~G~ir~i-GvS~~~-~~~l~~~~~~~~~~~~q 88 (248)
++.+...+-+ +.|+.+++++ +..|-.. +-++.+.++++.-.|--+ |=+-++ ...++++++....+++|
T Consensus 211 ~~~~~a~~~~-~~l~~~~i~~-----iE~P~~~----~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~i~~~~~d~v~ 280 (382)
T 1rvk_A 211 YSRTDALALG-RGLEKLGFDW-----IEEPMDE----QSLSSYKWLSDNLDIPVVGPESAAGKHWHRAEWIKAGACDILR 280 (382)
T ss_dssp CCHHHHHHHH-HHHHTTTCSE-----EECCSCT----TCHHHHHHHHHHCSSCEEECSSCSSHHHHHHHHHHTTCCSEEE
T ss_pred CCHHHHHHHH-HHHHhcCCCE-----EeCCCCh----hhHHHHHHHHhhCCCCEEEeCCccCcHHHHHHHHHcCCCCEEe
Confidence 3455544433 3566666553 3444322 235666677766555433 334567 88899998888888888
Q ss_pred cccCCcccc-chhchHHHHHHcCCcEEee
Q 025789 89 MEYSLWTRE-IEDDIIPLCRELGIGIVAY 116 (248)
Q Consensus 89 ~~~~~~~~~-~~~~~~~~~~~~gi~v~~~ 116 (248)
+..+-.-.- ...++..+|+++|+.++..
T Consensus 281 ik~~~~GGit~~~~i~~~A~~~g~~~~~~ 309 (382)
T 1rvk_A 281 TGVNDVGGITPALKTMHLAEAFGMECEVH 309 (382)
T ss_dssp ECHHHHTSHHHHHHHHHHHHHTTCCEEEC
T ss_pred eCchhcCCHHHHHHHHHHHHHcCCeEeec
Confidence 865543211 1257889999999999887
No 138
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=48.90 E-value=60 Score=26.17 Aligned_cols=97 Identities=20% Similarity=0.192 Sum_probs=61.2
Q ss_pred HHHHHHHhHcCCCcccEEEeccCCCCCCHHHHHH-HHHHHHHcCcccEEecc-------CCcHHHHHHHhccCCcceecc
Q 025789 18 KCCEASLKRLDVDYIDLYYQHRVDTSVSIEDTMG-ELKKLVEEGKIKYIGLS-------EASADTIRRAHAVHPITAVQM 89 (248)
Q Consensus 18 ~~~e~SL~rL~~d~iDl~~lH~~~~~~~~~~~~~-~l~~l~~~G~ir~iGvS-------~~~~~~l~~~~~~~~~~~~q~ 89 (248)
+.+++.|+-.| +|||++=+-|-......+++++ .++-+++.|---+.|=. .-..+++.+.++...|+++.+
T Consensus 26 ~~~~d~Le~~g-~yID~lKfg~Gt~~l~~~~~l~eki~l~~~~gV~v~~GGTl~E~~~~qg~~~~yl~~~k~lGf~~iEi 104 (251)
T 1qwg_A 26 KFVEDYLKVCG-DYIDFVKFGWGTSAVIDRDVVKEKINYYKDWGIKVYPGGTLFEYAYSKGKFDEFLNECEKLGFEAVEI 104 (251)
T ss_dssp HHHHHHHHHHG-GGCSEEEECTTGGGGSCHHHHHHHHHHHHTTTCEEEECHHHHHHHHHTTCHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHhh-hhcceEEecCceeeecCHHHHHHHHHHHHHcCCeEECCcHHHHHHHHcCcHHHHHHHHHHcCCCEEEE
Confidence 45677788888 8999999999765544445554 44444555655555542 113444444455566777777
Q ss_pred ccCCccccch--hchHHHHHHcCCcEEe
Q 025789 90 EYSLWTREIE--DDIIPLCRELGIGIVA 115 (248)
Q Consensus 90 ~~~~~~~~~~--~~~~~~~~~~gi~v~~ 115 (248)
.-..++-..+ ..++..+++.|..++.
T Consensus 105 S~G~i~l~~~~~~~~I~~~~~~G~~v~~ 132 (251)
T 1qwg_A 105 SDGSSDISLEERNNAIKRAKDNGFMVLT 132 (251)
T ss_dssp CCSSSCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCcccCCHHHHHHHHHHHHHCCCEEee
Confidence 6555554322 4578888888888854
No 139
>3ekg_A Mandelate racemase/muconate lactonizing enzyme; structural genomics, nysgrc, L-rhamnonate dehydratase,target PSI-2; HET: TLA; 1.60A {Azotobacter vinelandii avop} PDB: 2oz3_A*
Probab=48.79 E-value=68 Score=27.71 Aligned_cols=81 Identities=12% Similarity=-0.036 Sum_probs=55.8
Q ss_pred cEEEeccCCCCCCHHHHHHHHHHHHHcCcc---cEEeccCCcHHHHHHHhccCCcceeccccCCccc-cchhchHHHHHH
Q 025789 33 DLYYQHRVDTSVSIEDTMGELKKLVEEGKI---KYIGLSEASADTIRRAHAVHPITAVQMEYSLWTR-EIEDDIIPLCRE 108 (248)
Q Consensus 33 Dl~~lH~~~~~~~~~~~~~~l~~l~~~G~i---r~iGvS~~~~~~l~~~~~~~~~~~~q~~~~~~~~-~~~~~~~~~~~~ 108 (248)
++.++-.|-... -++.+.+++++-.+ -..|=+.++...+.++++...++++|+..+-.-. .....+...|+.
T Consensus 237 ~l~~iEeP~~~~----d~~~~a~l~~~~~~pi~Ia~gE~~~~~~~~~~li~~~a~dii~~d~~~~GGitea~kia~lA~a 312 (404)
T 3ekg_A 237 GLKWIEEALPPD----DYWGYAELRRNAPTGMMVTTGEHEATRWGFRMLLEMGCCDIIQPDVGWCGGVTELLKISALADA 312 (404)
T ss_dssp TCCEEECCSCTT----CHHHHHHHHHHSCTTCEEEECTTCCHHHHHHHHHHTTCCSEECCCTTTTTHHHHHHHHHHHHHH
T ss_pred CCcEEecCCCcc----cHHHHHHHHHhcCCCeEEEecCccCCHHHHHHHHHcCCCCeEecChhhcCCccHHHHHHHHHHH
Confidence 455555553322 25566677776544 3567788888999999988888999987765431 112678999999
Q ss_pred cCCcEEeec
Q 025789 109 LGIGIVAYS 117 (248)
Q Consensus 109 ~gi~v~~~~ 117 (248)
+|+.++..+
T Consensus 313 ~gv~v~~h~ 321 (404)
T 3ekg_A 313 HNALVVPHG 321 (404)
T ss_dssp TTCEECCCC
T ss_pred cCCEEEecC
Confidence 999997654
No 140
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=48.77 E-value=75 Score=25.98 Aligned_cols=105 Identities=15% Similarity=0.008 Sum_probs=58.3
Q ss_pred CCCCHHHHHHHHHHHHhHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCcccEEeccCCcHHHHHHHhccCCcceec
Q 025789 9 VKGSPEYVRKCCEASLKRLDVDYIDLYYQHRVDTSVSIEDTMGELKKLVEEGKIKYIGLSEASADTIRRAHAVHPITAVQ 88 (248)
Q Consensus 9 ~~~s~~~i~~~~e~SL~rL~~d~iDl~~lH~~~~~~~~~~~~~~l~~l~~~G~ir~iGvS~~~~~~l~~~~~~~~~~~~q 88 (248)
..++.+... .+-+.|.++|+++|.+-..-.|.....+.+..+.+..+++...++..++. .+...++.+.+.+ ++.+.
T Consensus 22 ~~~~~e~k~-~i~~~L~~~Gv~~IE~g~~~~~~~~p~~~d~~~~~~~~~~~~~~~~~~l~-~~~~~i~~a~~ag-~~~v~ 98 (298)
T 2cw6_A 22 NIVSTPVKI-KLIDMLSEAGLSVIETTSFVSPKWVPQMGDHTEVLKGIQKFPGINYPVLT-PNLKGFEAAVAAG-AKEVV 98 (298)
T ss_dssp SCCCHHHHH-HHHHHHHHTTCSEECCEECCCTTTCGGGTTHHHHHHHSCCCTTCBCCEEC-CSHHHHHHHHHTT-CSEEE
T ss_pred CCCCHHHHH-HHHHHHHHcCcCEEEECCCcCcccccccCCHHHHHHHHhhCCCCEEEEEc-CCHHhHHHHHHCC-CCEEE
Confidence 456777766 46678899999999998754442111112223333333333233433433 4567777776652 34444
Q ss_pred cccCCccc--------c------chhchHHHHHHcCCcEEee
Q 025789 89 MEYSLWTR--------E------IEDDIIPLCRELGIGIVAY 116 (248)
Q Consensus 89 ~~~~~~~~--------~------~~~~~~~~~~~~gi~v~~~ 116 (248)
+..+.-+. . ...+.+.+++++|+.+..+
T Consensus 99 i~~~~sd~~~~~~~~~~~~e~l~~~~~~i~~a~~~G~~v~~~ 140 (298)
T 2cw6_A 99 IFGAASELFTKKNINCSIEESFQRFDAILKAAQSANISVRGY 140 (298)
T ss_dssp EEEESCHHHHHHHHSCCHHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred EEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEE
Confidence 43332211 0 1145789999999988653
No 141
>3toy_A Mandelate racemase/muconate lactonizing enzyme FA protein; enolase, magnesium binding site, lyase; HET: P4C; 1.80A {Bradyrhizobium SP} PDB: 3tte_A*
Probab=48.02 E-value=96 Score=26.39 Aligned_cols=99 Identities=10% Similarity=-0.067 Sum_probs=62.0
Q ss_pred CCHHHHHHHHHHHHhHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCcc-cEEeccCCcHHHHHHHhccCCcceecc
Q 025789 11 GSPEYVRKCCEASLKRLDVDYIDLYYQHRVDTSVSIEDTMGELKKLVEEGKI-KYIGLSEASADTIRRAHAVHPITAVQM 89 (248)
Q Consensus 11 ~s~~~i~~~~e~SL~rL~~d~iDl~~lH~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvS~~~~~~l~~~~~~~~~~~~q~ 89 (248)
++.+...+ +-+.|+.++++ ++..|-+.. -++.+.+++++-.| -..|=|-++...+.++++...++++|+
T Consensus 224 ~~~~~A~~-~~~~l~~~~i~-----~iEeP~~~~----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~i 293 (383)
T 3toy_A 224 LDPAEATR-RIARLADYDLT-----WIEEPVPQE----NLSGHAAVRERSEIPIQAGENWWFPRGFAEAIAAGASDFIMP 293 (383)
T ss_dssp SCHHHHHH-HHHHHGGGCCS-----EEECCSCTT----CHHHHHHHHHHCSSCEEECTTCCHHHHHHHHHHHTCCSEECC
T ss_pred CCHHHHHH-HHHHHHhhCCC-----EEECCCCcc----hHHHHHHHHhhcCCCEEeCCCcCCHHHHHHHHHcCCCCEEEe
Confidence 34444333 23345555544 344553322 34566677766444 345667788899999988888899988
Q ss_pred ccCCcccc-chhchHHHHHHcCCcEEeeccc
Q 025789 90 EYSLWTRE-IEDDIIPLCRELGIGIVAYSPL 119 (248)
Q Consensus 90 ~~~~~~~~-~~~~~~~~~~~~gi~v~~~~~l 119 (248)
...-.-.- ....+...|+++|+.++..+.+
T Consensus 294 k~~~~GGit~~~~ia~~A~~~gi~~~~h~~~ 324 (383)
T 3toy_A 294 DLMKVGGITGWLNVAGQADAASIPMSSHILP 324 (383)
T ss_dssp CTTTTTHHHHHHHHHHHHHHHTCCBCCCSCH
T ss_pred CccccCCHHHHHHHHHHHHHcCCEEeecCHH
Confidence 77654211 1257889999999999775543
No 142
>3sbf_A Mandelate racemase / muconate lactonizing enzyme; enolase fold, acid sugar dehydratase, D-araninonate, isomera; HET: EPE D8T; 1.50A {Vibrionales bacterium swat-3} PDB: 3r25_A 3dfh_A 4gis_A 4gir_A 4ggh_A 3gy1_A
Probab=47.40 E-value=78 Score=27.12 Aligned_cols=70 Identities=13% Similarity=0.088 Sum_probs=49.0
Q ss_pred HHHHHHHHHcCccc-EEeccCCcHHHHHHHhccCCcceeccccCCcccc-chhchHHHHHHcCCcEEeeccc
Q 025789 50 MGELKKLVEEGKIK-YIGLSEASADTIRRAHAVHPITAVQMEYSLWTRE-IEDDIIPLCRELGIGIVAYSPL 119 (248)
Q Consensus 50 ~~~l~~l~~~G~ir-~iGvS~~~~~~l~~~~~~~~~~~~q~~~~~~~~~-~~~~~~~~~~~~gi~v~~~~~l 119 (248)
++.+.++++.-.|- ..|=+-++...++++++...++++|+..+..-.- ....+...|+.+|+.++.++..
T Consensus 241 ~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~~k~~~~GGit~~~kia~~A~~~gi~~~~h~~~ 312 (401)
T 3sbf_A 241 TEWLDNIRSQSSVSLGLGELFNNPEEWKSLIANRRIDFIRCHVSQIGGITPALKLGHLCQNFGVRIAWHCAP 312 (401)
T ss_dssp GGGHHHHHTTCCCCEEECTTCCSHHHHHHHHHTTCCSEECCCGGGGTSHHHHHHHHHHHHHHTCEECCCCCT
T ss_pred HHHHHHHHhhCCCCEEeCCccCCHHHHHHHHhcCCCCEEecCccccCCHHHHHHHHHHHHHcCCEEEecCCc
Confidence 44556666654443 3445667888999998888889988876653221 1256889999999999887764
No 143
>3t6c_A RSPA, putative MAND family dehydratase; enolase, mannonate dehydratase related protein, enzyme funct intitiative, lyase, hydro-lyases; HET: GCO; 1.60A {Pantoea ananatis} PDB: 3tw9_A 3twa_A 3twb_A*
Probab=47.24 E-value=38 Score=29.63 Aligned_cols=71 Identities=14% Similarity=-0.008 Sum_probs=50.7
Q ss_pred HHHHHHHHHHcCcc-cEEeccCCcHHHHHHHhccCCcceeccccCCcccc-chhchHHHHHHcCCcEEeeccc
Q 025789 49 TMGELKKLVEEGKI-KYIGLSEASADTIRRAHAVHPITAVQMEYSLWTRE-IEDDIIPLCRELGIGIVAYSPL 119 (248)
Q Consensus 49 ~~~~l~~l~~~G~i-r~iGvS~~~~~~l~~~~~~~~~~~~q~~~~~~~~~-~~~~~~~~~~~~gi~v~~~~~l 119 (248)
-++.+.+++++-.| -..|=|-++...+.++++...++++|+..+-.-.- ....+...|+.+|+.++..+..
T Consensus 279 d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~~~ 351 (440)
T 3t6c_A 279 NTEWLKMLRQQSSTPIAMGELFVNVNEWKPLIDNKLIDYIRCHISSIGGITPAKKIAIYSELNGVRTAWHSPG 351 (440)
T ss_dssp GGGGHHHHHHHCCSCEEECTTCCSHHHHHHHHHTTCCSEECCCGGGGTSHHHHHHHHHHHHHTTCEECCCCSS
T ss_pred hHHHHHHHHhhcCCCEEeCcccCCHHHHHHHHHcCCccceeechhhhCCHHHHHHHHHHHHHcCCEEEeccCC
Confidence 35566667665444 34556778899999999888889998876653321 1257889999999999877663
No 144
>2ps2_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9440A, enolase superfamily, PSI-2; 1.80A {Aspergillus oryzae RIB40}
Probab=46.96 E-value=22 Score=30.19 Aligned_cols=74 Identities=15% Similarity=0.070 Sum_probs=50.7
Q ss_pred HHHHHHHHHHcCcccEEec-cCCcHHHHHHHhccCCcceeccccCCcccc-chhchHHHHHHcCCcEEeecccccc
Q 025789 49 TMGELKKLVEEGKIKYIGL-SEASADTIRRAHAVHPITAVQMEYSLWTRE-IEDDIIPLCRELGIGIVAYSPLGRG 122 (248)
Q Consensus 49 ~~~~l~~l~~~G~ir~iGv-S~~~~~~l~~~~~~~~~~~~q~~~~~~~~~-~~~~~~~~~~~~gi~v~~~~~l~~G 122 (248)
-++.+.++++.-.|--++- +-++++.++++++....+++|+..+..-.- ...++...|+++|+.++..+.+.++
T Consensus 227 ~~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~~es~ 302 (371)
T 2ps2_A 227 TWRECISLRRKTDIPIIYDELATNEMSIVKILADDAAEGIDLKISKAGGLTRGRRQRDICLAAGYSVSVQETCGSD 302 (371)
T ss_dssp SHHHHHHHHTTCCSCEEESTTCCSHHHHHHHHHHTCCSEEEEEHHHHTSHHHHHHHHHHHHHHTCEEEEECSSCCH
T ss_pred CHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHhCCCCEEEechhhcCCHHHHHHHHHHHHHcCCeEEecCCCcCH
Confidence 3566677776655544433 446788888888888888888865543211 1256789999999999988777554
No 145
>2qdd_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.30A {Roseovarius nubinhibens} PDB: 3fvd_B
Probab=46.55 E-value=33 Score=29.18 Aligned_cols=74 Identities=8% Similarity=-0.076 Sum_probs=51.1
Q ss_pred HHHHHHHHHHcCcccEEe-ccCCcHHHHHHHhccCCcceeccccCCcccc-chhchHHHHHHcCCcEEeecccccc
Q 025789 49 TMGELKKLVEEGKIKYIG-LSEASADTIRRAHAVHPITAVQMEYSLWTRE-IEDDIIPLCRELGIGIVAYSPLGRG 122 (248)
Q Consensus 49 ~~~~l~~l~~~G~ir~iG-vS~~~~~~l~~~~~~~~~~~~q~~~~~~~~~-~~~~~~~~~~~~gi~v~~~~~l~~G 122 (248)
-++.+.+++++-.|--++ =+-++.+.++++++....+++|+.-+..-.- ....+..+|+++|+.++..+.+.++
T Consensus 225 d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGi~~~~~i~~~A~~~g~~~~~~~~~es~ 300 (378)
T 2qdd_A 225 TLDQCAHVARRVANPIMLDECLHEFSDHLAAWSRGACEGVKIKPNRVGGLTRARQIRDFGVSVGWQMHIEDVGGTA 300 (378)
T ss_dssp SHHHHHHHHTTCCSCEEECTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHHTCEEEECCSSCCH
T ss_pred CHHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHhCCCCEEEecccccCCHHHHHHHHHHHHHcCCeEEecCCCCcH
Confidence 466777777765554443 3456788888888888888888866543211 1257889999999999988655443
No 146
>3qld_A Mandelate racemase/muconate lactonizing protein; structural genomics, PSI-2, isomerase; HET: MSE; 1.85A {Alicyclobacillus acidocaldarius LAA1}
Probab=46.53 E-value=21 Score=30.69 Aligned_cols=87 Identities=11% Similarity=0.035 Sum_probs=60.3
Q ss_pred ccEEEeccCCCCCCHHHHHHHHHHHHHcCcc-cEEeccCCcHHHHHHHhccCCcceeccccCCcccc-chhchHHHHHHc
Q 025789 32 IDLYYQHRVDTSVSIEDTMGELKKLVEEGKI-KYIGLSEASADTIRRAHAVHPITAVQMEYSLWTRE-IEDDIIPLCREL 109 (248)
Q Consensus 32 iDl~~lH~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvS~~~~~~l~~~~~~~~~~~~q~~~~~~~~~-~~~~~~~~~~~~ 109 (248)
.++.++-.|-.... ++.+.++++.-.| -..|=|.++...+.++++...++++|+..+..-.- ....+...|+++
T Consensus 215 ~~i~~iEeP~~~~d----~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~~~a~d~v~~k~~~~GGit~~~~ia~~A~~~ 290 (388)
T 3qld_A 215 YDLQFIEQPLPEDD----WFDLAKLQASLRTPVCLDESVRSVRELKLTARLGAARVLNVKPGRLGGFGATLRALDVAGEA 290 (388)
T ss_dssp GCCSCEECCSCTTC----HHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHT
T ss_pred CCCcEEECCCCccc----HHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHcCCCCEEEECchhhCCHHHHHHHHHHHHHC
Confidence 45667777654332 4566667666444 45677888999999999888888988875543211 125788999999
Q ss_pred CCcEEeecccccc
Q 025789 110 GIGIVAYSPLGRG 122 (248)
Q Consensus 110 gi~v~~~~~l~~G 122 (248)
|+.++..+.+.+|
T Consensus 291 gi~~~~~~~~es~ 303 (388)
T 3qld_A 291 GMAAWVGGMYETG 303 (388)
T ss_dssp TCEEEECCCCCCH
T ss_pred CCeEEecCccchH
Confidence 9999877666544
No 147
>3dgb_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding, isomeras structural genomics, PSI-2; HET: MUC; 1.70A {Pseudomonas fluorescens} PDB: 3ct2_A* 3fj4_A* 1muc_A 1bkh_A 3muc_A 2muc_A 1f9c_A
Probab=46.21 E-value=31 Score=29.47 Aligned_cols=73 Identities=10% Similarity=0.036 Sum_probs=51.1
Q ss_pred HHHHHHHHHcCcc-cEEeccCCcHHHHHHHhccCCcceeccccCCccc-cchhchHHHHHHcCCcEEeecccccc
Q 025789 50 MGELKKLVEEGKI-KYIGLSEASADTIRRAHAVHPITAVQMEYSLWTR-EIEDDIIPLCRELGIGIVAYSPLGRG 122 (248)
Q Consensus 50 ~~~l~~l~~~G~i-r~iGvS~~~~~~l~~~~~~~~~~~~q~~~~~~~~-~~~~~~~~~~~~~gi~v~~~~~l~~G 122 (248)
++.+.++++.-.| -..|=|.++...+.++++...++++|+..+..-. .....+..+|+++|+.++..+.+.++
T Consensus 234 ~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~i~~~A~~~gi~~~~~~~~es~ 308 (382)
T 3dgb_A 234 RAGMVRLNASSPAPIMADESIECVEDAFNLAREGAASVFALKIAKNGGPRATLRTAAIAEAAGIGLYGGTMLEGG 308 (382)
T ss_dssp HHHHHHHHHHCSSCEEESTTCSSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHHTCEEEECCSCCCH
T ss_pred HHHHHHHHHhCCCCEEeCCCcCCHHHHHHHHHcCCCCEEEecccccCCHHHHHHHHHHHHHcCCeEeecCCCccH
Confidence 5566667665444 3556677888889988888888888886544321 11256889999999999887766554
No 148
>3v3w_A Starvation sensing protein RSPA; enolase, enzyme function initiative, EFI, lyase; HET: NHE; 1.40A {Cellvibrio japonicus} PDB: 3v4b_A* 4f4r_A 3qkf_A* 3qke_A* 3p93_A* 3ow1_A 3pk7_A* 3rgt_A* 3bsm_A
Probab=45.85 E-value=38 Score=29.48 Aligned_cols=68 Identities=9% Similarity=-0.059 Sum_probs=42.1
Q ss_pred HHHHHHHcCccc-EEeccCCcHHHHHHHhccCCcceeccccCCccc-cchhchHHHHHHcCCcEEeeccc
Q 025789 52 ELKKLVEEGKIK-YIGLSEASADTIRRAHAVHPITAVQMEYSLWTR-EIEDDIIPLCRELGIGIVAYSPL 119 (248)
Q Consensus 52 ~l~~l~~~G~ir-~iGvS~~~~~~l~~~~~~~~~~~~q~~~~~~~~-~~~~~~~~~~~~~gi~v~~~~~l 119 (248)
.+.++++.-.|- ..|=+-++...++++++...++++|+..+..-. .....+...|+.+|+.++..+..
T Consensus 268 ~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~ga~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~~~ 337 (424)
T 3v3w_A 268 SFKLIRQHTTTPLAVGEVFNSIHDCRELIQNQWIDYIRTTIVHAGGISQMRRIADFASLFHVRTGFHGAT 337 (424)
T ss_dssp HHHHHHHHCCSCEEECTTCCSGGGTHHHHHTTCCSEECCCTTTTTHHHHHHHHHHHHHTTTCEEEECCCT
T ss_pred HHHHHHhhCCCCEEEccCcCCHHHHHHHHHcCCCCeEeecchhcCCHHHHHHHHHHHHHcCCEEEecCCC
Confidence 344444433332 223344556666666766777777776665321 11256889999999999988875
No 149
>4hb7_A Dihydropteroate synthase; transferase; 1.95A {Staphylococcus aureus} PDB: 1ad1_A 1ad4_A*
Probab=45.44 E-value=1.2e+02 Score=24.62 Aligned_cols=107 Identities=12% Similarity=0.062 Sum_probs=59.0
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHhHcCCCcccEEEec-cCCCC-CCHH----HHHHHHHHHHHcCcccEEeccCCcHHH
Q 025789 1 MLDGVSIGVKGSPEYVRKCCEASLKRLDVDYIDLYYQH-RVDTS-VSIE----DTMGELKKLVEEGKIKYIGLSEASADT 74 (248)
Q Consensus 1 ~~~~~~~~~~~s~~~i~~~~e~SL~rL~~d~iDl~~lH-~~~~~-~~~~----~~~~~l~~l~~~G~ir~iGvS~~~~~~ 74 (248)
|.|+|.+ .+.+...+..++. -.=|.|.||+==-- +|... .+.+ .++..++.+++.+ -.|.+-++.++.
T Consensus 20 FsDGG~~---~~~~~a~~~a~~m-~~~GAdiIDIGgeSTRPga~~vs~eeE~~Rv~pvi~~l~~~~--v~iSIDT~~~~V 93 (270)
T 4hb7_A 20 FSDGGKF---NNVETAINRVKAM-IDEGADIIDVGGVSTRPGHEMVTLEEELNRVLPVVEAIVGFD--VKISVDTFRSEV 93 (270)
T ss_dssp ----------CHHHHHHHHHHHH-HHTTCSEEEEESCCCSTTCCCCCHHHHHHHHHHHHHHHTTSS--SEEEEECSCHHH
T ss_pred CCCCCCC---CCHHHHHHHHHHH-HHCCCCEEEECCccCCCCCCCCchHHHHHHHHHHHHHhhcCC--CeEEEECCCHHH
Confidence 5566654 2445555555443 34577777763211 23322 2232 3566666666544 357888999999
Q ss_pred HHHHhccCCcceeccccCCccccchhchHHHHHHcCCcEEeec
Q 025789 75 IRRAHAVHPITAVQMEYSLWTREIEDDIIPLCRELGIGIVAYS 117 (248)
Q Consensus 75 l~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~gi~v~~~~ 117 (248)
++++++.+---++- .+-... ..++++.+.+++++++.+.
T Consensus 94 a~~al~aGa~iIND--Vs~g~~--d~~m~~~va~~~~~~vlMH 132 (270)
T 4hb7_A 94 AEACLKLGVDMIND--QWAGLY--DHRMFQIVAKYDAEIILMH 132 (270)
T ss_dssp HHHHHHHTCCEEEE--TTTTSS--CTHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHhccceecc--cccccc--chhHHHHHHHcCCCeEEec
Confidence 99998765321221 121111 2578999999999999876
No 150
>1uwk_A Urocanate hydratase; hydrolase, urocanase, imidazolonepropionate, histidine metabolism, lyase; HET: NAD URO; 1.19A {Pseudomonas putida} SCOP: e.51.1.1 PDB: 1w1u_A* 1uwl_A* 2v7g_A*
Probab=45.33 E-value=52 Score=29.38 Aligned_cols=57 Identities=23% Similarity=0.264 Sum_probs=46.5
Q ss_pred HhHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCcccEEeccCCcHHHHHHHhcc-CCccee
Q 025789 24 LKRLDVDYIDLYYQHRVDTSVSIEDTMGELKKLVEEGKIKYIGLSEASADTIRRAHAV-HPITAV 87 (248)
Q Consensus 24 L~rL~~d~iDl~~lH~~~~~~~~~~~~~~l~~l~~~G~ir~iGvS~~~~~~l~~~~~~-~~~~~~ 87 (248)
-+|+.+.|+|.+- ..++++++..++.+++|+...||+-..-.+.++++.+. ..+|++
T Consensus 204 ~~R~~~gyld~~~-------~~ldeal~~~~~a~~~~~~~SIg~~GNaadv~~~l~~~~i~~Dlv 261 (557)
T 1uwk_A 204 DFRLETRYVDEQA-------TDLDDALVRIAKYTAEGKAISIALHGNAAEILPELVKRGVRPDMV 261 (557)
T ss_dssp HHHHHTTSCCEEC-------SSHHHHHHHHHHHHHTTCCCEEEEESCHHHHHHHHHHHTCCCSEE
T ss_pred HHHHhCCCceeEc-------CCHHHHHHHHHHHHHcCCceEEEEeccHHHHHHHHHHCCCCCCCC
Confidence 4677888999753 45899999999999999999999999988888888776 344444
No 151
>3r4e_A Mandelate racemase/muconate lactonizing enzyme; enolase fold, mannonate dehydratase, D-mannonate, lyase; HET: CS2; 1.65A {Novosphingobium aromaticivorans} PDB: 2qjj_A 2qjn_A* 2qjm_A*
Probab=45.18 E-value=35 Score=29.60 Aligned_cols=52 Identities=8% Similarity=-0.137 Sum_probs=36.4
Q ss_pred cCCcHHHHHHHhccCCcceeccccCCccc-cchhchHHHHHHcCCcEEeeccc
Q 025789 68 SEASADTIRRAHAVHPITAVQMEYSLWTR-EIEDDIIPLCRELGIGIVAYSPL 119 (248)
Q Consensus 68 S~~~~~~l~~~~~~~~~~~~q~~~~~~~~-~~~~~~~~~~~~~gi~v~~~~~l 119 (248)
+-++...++++++...++++|+..+-.-. .....+...|+.+|+.++..+.+
T Consensus 279 ~~~~~~~~~~~l~~~a~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~~~ 331 (418)
T 3r4e_A 279 IFNTIWDAKDLIQNQLIDYIRATVVGAGGLTHLRRIADLASLYQVRTGCHGPT 331 (418)
T ss_dssp TCCSGGGTHHHHHTTCCSEECCCTTTTTHHHHHHHHHHHHHHTTCEEEECCCT
T ss_pred CcCCHHHHHHHHHcCCCCeEecCccccCCHHHHHHHHHHHHHcCCEEeecCCC
Confidence 44556666677766777788776665321 11256889999999999988875
No 152
>2opj_A O-succinylbenzoate-COA synthase; TIM barrel, structural genomics, protein structure initiative; 1.60A {Thermobifida fusca} PDB: 2qvh_A*
Probab=45.03 E-value=55 Score=27.29 Aligned_cols=84 Identities=15% Similarity=0.157 Sum_probs=42.5
Q ss_pred ccEEEeccCCCCCCHHHHHHHHHHHHHcCcc-cEEeccCCcHHHHHHHhccCCcceeccccCCccccchhchHHHHHHcC
Q 025789 32 IDLYYQHRVDTSVSIEDTMGELKKLVEEGKI-KYIGLSEASADTIRRAHAVHPITAVQMEYSLWTREIEDDIIPLCRELG 110 (248)
Q Consensus 32 iDl~~lH~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvS~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~g 110 (248)
.++.++-.|-. + ++.+.+++++-.| -..|=|.++...+.++++...++++|+.....-. -.+.+..|+.+|
T Consensus 150 ~~l~~iEqP~~--~----~~~~~~l~~~~~iPIa~dEs~~~~~~~~~~i~~~a~d~i~ik~~~~GG--it~~~~ia~~~g 221 (327)
T 2opj_A 150 FELEYVEQPCA--T----VDELAEVRRRVSVPIAADESIRRAEDPLRVRDAEAADVVVLKVQPLGG--VRAALRLAEECG 221 (327)
T ss_dssp GCEEEEECCSS--S----HHHHHHHHHHCSSCEEC-----------CTTTTTCCSBEEECHHHHTS--HHHHHHHHHHTC
T ss_pred cCCcEEeCCCC--C----HHHHHHHHhhCCCCEEcCCCCCCHHHHHHHHHhCCCCEEEeCccccCC--HHHHHHHHHHcC
Confidence 35566666543 1 3455555554333 2334455556666666666666676665433211 145677888899
Q ss_pred CcEEeeccccccc
Q 025789 111 IGIVAYSPLGRGF 123 (248)
Q Consensus 111 i~v~~~~~l~~G~ 123 (248)
+.++..+.+.+++
T Consensus 222 i~~~~~~~~es~i 234 (327)
T 2opj_A 222 LPVVVSSAVETSV 234 (327)
T ss_dssp SCEEEBCCSCCHH
T ss_pred CcEEEcCCCcCHH
Confidence 9999888776553
No 153
>3mqt_A Mandelate racemase/muconate lactonizing protein; PSI-II, NYSGXRC, muconate lactonizing EN structural genomics, protein structure initiative; 2.10A {Shewanella pealeana}
Probab=44.94 E-value=32 Score=29.53 Aligned_cols=69 Identities=12% Similarity=0.021 Sum_probs=49.2
Q ss_pred HHHHHHHHHcCccc-EEeccCCcHHHHHHHhccCCcceeccccCCcccc-chhchHHHHHHcCCcEEeecc
Q 025789 50 MGELKKLVEEGKIK-YIGLSEASADTIRRAHAVHPITAVQMEYSLWTRE-IEDDIIPLCRELGIGIVAYSP 118 (248)
Q Consensus 50 ~~~l~~l~~~G~ir-~iGvS~~~~~~l~~~~~~~~~~~~q~~~~~~~~~-~~~~~~~~~~~~gi~v~~~~~ 118 (248)
++.+.++++.-.|- ..|=|-++...++++++....+++|+...-.-.- ....+...|+.+|+.++..+.
T Consensus 241 ~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~~ 311 (394)
T 3mqt_A 241 LIGHQKLAAAINTRLCGAEMSTTRFEAQEWLEKTGISVVQSDYNRCGGVTELLRIMDICEHHNAQLMPHNW 311 (394)
T ss_dssp HHHHHHHHHHSSSEEEECTTCCHHHHHHHHHHHHCCSEECCCTTTSSCHHHHHHHHHHHHHHTCEECCCCC
T ss_pred HHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHcCCCCeEecCccccCCHHHHHHHHHHHHHcCCEEeccCC
Confidence 45666777765553 3444667888888888888888998877664321 125688999999999987663
No 154
>2p3z_A L-rhamnonate dehydratase; enolase, structural genomics, PSI, protein structure initiat YORK structural genomics research consortium; 1.80A {Salmonella typhimurium LT2} PDB: 3box_A 3cxo_A* 2gsh_A 3d47_A 3d46_A 2i5q_A
Probab=44.66 E-value=77 Score=27.44 Aligned_cols=96 Identities=14% Similarity=0.122 Sum_probs=59.4
Q ss_pred CCHHHHHHHHHHHHhHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCc--c-cEEeccCCcHHHHHHHhccCCccee
Q 025789 11 GSPEYVRKCCEASLKRLDVDYIDLYYQHRVDTSVSIEDTMGELKKLVEEGK--I-KYIGLSEASADTIRRAHAVHPITAV 87 (248)
Q Consensus 11 ~s~~~i~~~~e~SL~rL~~d~iDl~~lH~~~~~~~~~~~~~~l~~l~~~G~--i-r~iGvS~~~~~~l~~~~~~~~~~~~ 87 (248)
++.+...+-+++ |+. .++.+|-.|-... -++.+.+++++-. | -..|=+.++...+.++++.. ++++
T Consensus 233 ~~~~~Ai~~~~~-l~~-----~~i~~iEqPl~~~----d~~~~~~l~~~~~~~ipIa~dE~~~~~~~~~~~i~~~-~d~i 301 (415)
T 2p3z_A 233 QDVNYATKLAHA-CAP-----FNLKWIEECLPPQ----QYEGYRELKRNAPAGMMVTSGEHHGTLQSFRTLAETG-IDIM 301 (415)
T ss_dssp CCHHHHHHHHHH-HGG-----GTCCEEECCSCTT----CHHHHHHHHHHSCTTCEEEECTTCCSHHHHHHHHHTT-CSEE
T ss_pred CCHHHHHHHHHH-Hhh-----cCCceEeCCCCcc----hHHHHHHHHHhcCCCCcEEcCCCCCCHHHHHHHHHcC-CCEE
Confidence 445444444433 443 3556666664433 2455556665432 2 24466677888999998888 8999
Q ss_pred ccccCCcccc-chhchHHHHHHcCCcEEeec
Q 025789 88 QMEYSLWTRE-IEDDIIPLCRELGIGIVAYS 117 (248)
Q Consensus 88 q~~~~~~~~~-~~~~~~~~~~~~gi~v~~~~ 117 (248)
|+..+-.-.- ....+..+|+++|+.++..+
T Consensus 302 ~ik~~~~GGitea~~ia~lA~~~gi~v~~h~ 332 (415)
T 2p3z_A 302 QPDVGWCGGLTTLVEIAALAKSRGQLVVPHG 332 (415)
T ss_dssp CCCHHHHTCHHHHHHHHHHHHHTTCCBCCCC
T ss_pred EeCccccCCHHHHHHHHHHHHHcCCEEEecC
Confidence 8876543211 12578899999999988754
No 155
>4dxk_A Mandelate racemase / muconate lactonizing enzyme protein; enolase, mandelate racemase subgroup, enzyme function initia EFI; 1.25A {Agrobacterium tumefaciens} PDB: 4dx3_A 2pod_A
Probab=44.51 E-value=55 Score=28.12 Aligned_cols=70 Identities=9% Similarity=0.024 Sum_probs=49.4
Q ss_pred HHHHHHHHHcCccc-EEeccCCcHHHHHHHhccCCcceeccccCCccc-cchhchHHHHHHcCCcEEeeccc
Q 025789 50 MGELKKLVEEGKIK-YIGLSEASADTIRRAHAVHPITAVQMEYSLWTR-EIEDDIIPLCRELGIGIVAYSPL 119 (248)
Q Consensus 50 ~~~l~~l~~~G~ir-~iGvS~~~~~~l~~~~~~~~~~~~q~~~~~~~~-~~~~~~~~~~~~~gi~v~~~~~l 119 (248)
++.+.+++++-.|. ..|=|-++...++++++....+++|+.....-. .....+...|+.+|+.++.++..
T Consensus 250 ~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~a~d~v~~d~~~~GGit~~~kia~~A~~~gi~~~~h~~~ 321 (400)
T 4dxk_A 250 LSSLTRYAAVSPAPISASETLGSRWAFRDLLETGAAGVVMLDISWCGGLSEARKIASMAEAWHLPVAPHXCT 321 (400)
T ss_dssp GGGHHHHHHHCSSCEEECTTCCHHHHHHHHHHTTCCCEEEECTTTTTHHHHHHHHHHHHHHTTCCEEEC-CC
T ss_pred HHHHHHHHHhCCCCEEecCCcCCHHHHHHHHHcCCCCEEEeCccccCCHHHHHHHHHHHHHcCCEEEecCCC
Confidence 44566666654453 345566788899999988889999988776432 11256889999999999887653
No 156
>3rcy_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, protein structure initiative; HET: RIB; 1.99A {Roseovarius SP} PDB: 3t4w_A
Probab=44.45 E-value=32 Score=30.08 Aligned_cols=69 Identities=6% Similarity=-0.023 Sum_probs=48.7
Q ss_pred HHHHHHHHHcCccc-EEeccCCcHHHHHHHhccCCcceeccccCCccc-cchhchHHHHHHcCCcEEeecc
Q 025789 50 MGELKKLVEEGKIK-YIGLSEASADTIRRAHAVHPITAVQMEYSLWTR-EIEDDIIPLCRELGIGIVAYSP 118 (248)
Q Consensus 50 ~~~l~~l~~~G~ir-~iGvS~~~~~~l~~~~~~~~~~~~q~~~~~~~~-~~~~~~~~~~~~~gi~v~~~~~ 118 (248)
++.+.++++.-.|- ..|=+-++...++++++...++++|+..+-.-. .....+..+|+.+|+.++..++
T Consensus 243 ~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~g~~D~v~~d~~~~GGit~~~kia~lA~~~gv~~~~h~~ 313 (433)
T 3rcy_A 243 VGAMAQVARAVRIPVATGERLTTKAEFAPVLREGAAAILQPALGRAGGIWEMKKVAAMAEVYNAQMAPHLY 313 (433)
T ss_dssp HHHHHHHHHHSSSCEEECTTCCSHHHHHHHHHTTCCSEECCCHHHHTHHHHHHHHHHHHHTTTCEECCCCS
T ss_pred HHHHHHHHhccCCCEEecCCCCCHHHHHHHHHcCCCCEEEeCchhcCCHHHHHHHHHHHHHcCCEEEecCC
Confidence 56666777665553 445566788889999888888888886554321 1125688999999999988763
No 157
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=44.01 E-value=82 Score=26.84 Aligned_cols=100 Identities=10% Similarity=0.109 Sum_probs=61.1
Q ss_pred CCHHHHHHHHHHHHhHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCcccEEeccCCcHHHHHHHhccCCcceeccc
Q 025789 11 GSPEYVRKCCEASLKRLDVDYIDLYYQHRVDTSVSIEDTMGELKKLVEEGKIKYIGLSEASADTIRRAHAVHPITAVQME 90 (248)
Q Consensus 11 ~s~~~i~~~~e~SL~rL~~d~iDl~~lH~~~~~~~~~~~~~~l~~l~~~G~ir~iGvS~~~~~~l~~~~~~~~~~~~q~~ 90 (248)
.+.+...+++. .|.+-|.|.|++=. +..+..+++.+.+++=.|--++=-.|++..+.++++.+ .+. +.
T Consensus 43 ~D~~atv~Qi~-~l~~aG~diVRvav--------p~~~~a~al~~I~~~~~vPlvaDiHf~~~lal~a~e~G-~dk--lR 110 (366)
T 3noy_A 43 HDVEATLNQIK-RLYEAGCEIVRVAV--------PHKEDVEALEEIVKKSPMPVIADIHFAPSYAFLSMEKG-VHG--IR 110 (366)
T ss_dssp TCHHHHHHHHH-HHHHTTCCEEEEEC--------CSHHHHHHHHHHHHHCSSCEEEECCSCHHHHHHHHHTT-CSE--EE
T ss_pred cCHHHHHHHHH-HHHHcCCCEEEeCC--------CChHHHHHHHHHHhcCCCCEEEeCCCCHHHHHHHHHhC-CCe--EE
Confidence 45555555554 36677877777622 23556788888888855444554467877777766542 233 34
Q ss_pred cCCccc---cchhchHHHHHHcCCcEEe---ecccccc
Q 025789 91 YSLWTR---EIEDDIIPLCRELGIGIVA---YSPLGRG 122 (248)
Q Consensus 91 ~~~~~~---~~~~~~~~~~~~~gi~v~~---~~~l~~G 122 (248)
.|+-|- ..-.++++.|+++|+.+-. ++.|...
T Consensus 111 INPGNig~~~~~~~vv~~ak~~~~piRIGvN~GSL~~~ 148 (366)
T 3noy_A 111 INPGNIGKEEIVREIVEEAKRRGVAVRIGVNSGSLEKD 148 (366)
T ss_dssp ECHHHHSCHHHHHHHHHHHHHHTCEEEEEEEGGGCCHH
T ss_pred ECCcccCchhHHHHHHHHHHHcCCCEEEecCCcCCCHH
Confidence 444332 1126799999999998744 4444433
No 158
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=43.64 E-value=1.4e+02 Score=24.83 Aligned_cols=100 Identities=10% Similarity=0.029 Sum_probs=62.7
Q ss_pred CCHHHHHHHHHHHHhHcCCCcccEEEe-ccCCCC---CCH---HH---HHHHHHHHHHcCcccEEeccCCcHHHHHHHhc
Q 025789 11 GSPEYVRKCCEASLKRLDVDYIDLYYQ-HRVDTS---VSI---ED---TMGELKKLVEEGKIKYIGLSEASADTIRRAHA 80 (248)
Q Consensus 11 ~s~~~i~~~~e~SL~rL~~d~iDl~~l-H~~~~~---~~~---~~---~~~~l~~l~~~G~ir~iGvS~~~~~~l~~~~~ 80 (248)
.+.+.+.+..++ +..=|-|.||+=-- =.|... .++ +| +...++.+++.-. --|.|-++.++.++++++
T Consensus 46 ~~~~~al~~A~~-~v~~GAdIIDIGgeSTrPga~~~~~~V~~~eE~~Rv~pvI~~l~~~~~-vpISIDT~~~~Va~aAl~ 123 (314)
T 3tr9_A 46 LDLNSALRTAEK-MVDEGADILDIGGEATNPFVDIKTDSPSTQIELDRLLPVIDAIKKRFP-QLISVDTSRPRVMREAVN 123 (314)
T ss_dssp CSHHHHHHHHHH-HHHTTCSEEEEECCCSCTTC-----CHHHHHHHHHHHHHHHHHHHHCC-SEEEEECSCHHHHHHHHH
T ss_pred CCHHHHHHHHHH-HHHCCCCEEEECCCCCCCCcccccCCCCHHHHHHHHHHHHHHHHhhCC-CeEEEeCCCHHHHHHHHH
Confidence 356666665555 34568889998743 234322 022 22 5566667766521 358888999999999988
Q ss_pred cCCcceeccccCCccccchhchHHHHHHcCCcEEeec
Q 025789 81 VHPITAVQMEYSLWTREIEDDIIPLCRELGIGIVAYS 117 (248)
Q Consensus 81 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~gi~v~~~~ 117 (248)
.+.--++ ..|-.. ..++++.++++|.+++.+.
T Consensus 124 aGa~iIN--DVsg~~---~~~m~~v~a~~g~~vVlMh 155 (314)
T 3tr9_A 124 TGADMIN--DQRALQ---LDDALTTVSALKTPVCLMH 155 (314)
T ss_dssp HTCCEEE--ETTTTC---STTHHHHHHHHTCCEEEEC
T ss_pred cCCCEEE--ECCCCC---chHHHHHHHHhCCeEEEEC
Confidence 7542222 223322 2478999999999999865
No 159
>3fcp_A L-Ala-D/L-Glu epimerase, A muconate lactonizing enzyme; structural genomics, nysgrc,target 9450E, PSI-2; 1.80A {Klebsiella pneumoniae subsp}
Probab=43.56 E-value=32 Score=29.41 Aligned_cols=73 Identities=12% Similarity=-0.009 Sum_probs=50.5
Q ss_pred HHHHHHHHHcCcc-cEEeccCCcHHHHHHHhccCCcceeccccCCccc-cchhchHHHHHHcCCcEEeecccccc
Q 025789 50 MGELKKLVEEGKI-KYIGLSEASADTIRRAHAVHPITAVQMEYSLWTR-EIEDDIIPLCRELGIGIVAYSPLGRG 122 (248)
Q Consensus 50 ~~~l~~l~~~G~i-r~iGvS~~~~~~l~~~~~~~~~~~~q~~~~~~~~-~~~~~~~~~~~~~gi~v~~~~~l~~G 122 (248)
++.+.++++.-.| -..|=|.++...+.++++...++++|+..+..-. .....+...|+++|+.++..+.+.+|
T Consensus 233 ~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~~~a~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~~~~~es~ 307 (381)
T 3fcp_A 233 NAALVRLSQQIETAILADEAVATAYDGYQLAQQGFTGAYALKIAKAGGPNSVLALARVAQAAGIGLYGGTMLEGT 307 (381)
T ss_dssp HHHHHHHHHHSSSEEEESTTCCSHHHHHHHHHTTCCSEEEECHHHHTSTTHHHHHHHHHHHHTCEEEECCSCCCH
T ss_pred HHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHcCCCCEEEecccccCCHHHHHHHHHHHHHcCCceecCCCCccH
Confidence 5556666665333 4456677788888888888888888886544221 11266889999999999887766554
No 160
>3ijw_A Aminoglycoside N3-acetyltransferase; anthrax, COA, acyltransferase, structural genom center for structural genomics of infectious diseases; HET: MSE ACO; 1.90A {Bacillus anthracis} SCOP: c.140.1.0 PDB: 3slf_A* 3n0s_A* 3slb_A* 3n0m_A* 3kzl_A* 3e4f_A*
Probab=43.47 E-value=25 Score=28.70 Aligned_cols=50 Identities=18% Similarity=0.117 Sum_probs=36.0
Q ss_pred HHHHHHHHhHcCCCcccEEEeccCCCC-----CCHHHHHHHHHHHHH-cCcccEEe
Q 025789 17 RKCCEASLKRLDVDYIDLYYQHRVDTS-----VSIEDTMGELKKLVE-EGKIKYIG 66 (248)
Q Consensus 17 ~~~~e~SL~rL~~d~iDl~~lH~~~~~-----~~~~~~~~~l~~l~~-~G~ir~iG 66 (248)
+++|.+.|++||+.-=|++++|..-.. -..+.++++|.+++. +|-+--=.
T Consensus 17 ~~~l~~~L~~LGi~~Gd~llVHsSl~~lG~v~gg~~~vi~AL~~~vg~~GTLvmPt 72 (268)
T 3ijw_A 17 IKTITNDLRKLGLKKGMTVIVHSSLSSIGWISGGAVAVVEALMEVITEEGTIIMPT 72 (268)
T ss_dssp HHHHHHHHHHHTCCTTCEEEEEECTGGGCCBTTHHHHHHHHHHHHHCTTSEEEEEC
T ss_pred HHHHHHHHHHcCCCCCCEEEEEechHHhCCCCCCHHHHHHHHHHHhCCCCeEEEec
Confidence 456778899999999999999986322 124567888888875 56654333
No 161
>3rr1_A GALD, putative D-galactonate dehydratase; enolase, magnesium binding site, lyase; 1.95A {Ralstonia pickettii} PDB: 3rra_A
Probab=43.05 E-value=70 Score=27.58 Aligned_cols=98 Identities=11% Similarity=0.060 Sum_probs=62.0
Q ss_pred CCHHHHHHHHHHHHhHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCccc-EEeccCCcHHHHHHHhccCCcceecc
Q 025789 11 GSPEYVRKCCEASLKRLDVDYIDLYYQHRVDTSVSIEDTMGELKKLVEEGKIK-YIGLSEASADTIRRAHAVHPITAVQM 89 (248)
Q Consensus 11 ~s~~~i~~~~e~SL~rL~~d~iDl~~lH~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvS~~~~~~l~~~~~~~~~~~~q~ 89 (248)
++.+...+ +-+.|+.+++++| ..|-.. +-++.+.++++.-.|- ..|=+-++...++++++....+++|+
T Consensus 189 ~~~~~A~~-~~~~L~~~~i~~i-----EeP~~~----~d~~~~~~l~~~~~iPIa~dE~i~~~~~~~~~l~~~a~d~v~~ 258 (405)
T 3rr1_A 189 VSAPMAKV-LIKELEPYRPLFI-----EEPVLA----EQAETYARLAAHTHLPIAAGERMFSRFDFKRVLEAGGVSILQP 258 (405)
T ss_dssp BCHHHHHH-HHHHHGGGCCSCE-----ECSSCC----SSTHHHHHHHTTCSSCEEECTTCCSHHHHHHHHHHCCCSEECC
T ss_pred CCHHHHHH-HHHHHHhcCCCEE-----ECCCCc----ccHHHHHHHHhcCCCCEEecCCcCCHHHHHHHHHHhCCCeEEE
Confidence 34444333 2344555555443 444322 1345666777665554 34456678899999998888899998
Q ss_pred ccCCcccc-chhchHHHHHHcCCcEEeecc
Q 025789 90 EYSLWTRE-IEDDIIPLCRELGIGIVAYSP 118 (248)
Q Consensus 90 ~~~~~~~~-~~~~~~~~~~~~gi~v~~~~~ 118 (248)
..+-.-.- ....+...|+.+|+.++..+.
T Consensus 259 d~~~~GGitea~kia~lA~~~gi~v~~h~~ 288 (405)
T 3rr1_A 259 DLSHAGGITECVKIAAMAEAYDVALAPHCP 288 (405)
T ss_dssp BTTTTTHHHHHHHHHHHHHTTTCEECCBCC
T ss_pred ChhhcCCHHHHHHHHHHHHHcCCEEEeCCC
Confidence 77654321 125789999999999988754
No 162
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=42.77 E-value=64 Score=25.70 Aligned_cols=46 Identities=11% Similarity=0.039 Sum_probs=26.3
Q ss_pred HHHHHhccCCcceeccccCCc---cccchhchHHHHHHcCCcEEe-eccc
Q 025789 74 TIRRAHAVHPITAVQMEYSLW---TREIEDDIIPLCRELGIGIVA-YSPL 119 (248)
Q Consensus 74 ~l~~~~~~~~~~~~q~~~~~~---~~~~~~~~~~~~~~~gi~v~~-~~~l 119 (248)
...+.+....++.+++....+ ......++...++++|+.+.+ +++.
T Consensus 21 ~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~~ 70 (294)
T 3vni_A 21 YYIEKVAKLGFDILEIAASPLPFYSDIQINELKACAHGNGITLTVGHGPS 70 (294)
T ss_dssp HHHHHHHHHTCSEEEEESTTGGGCCHHHHHHHHHHHHHTTCEEEEEECCC
T ss_pred HHHHHHHHcCCCEEEecCcccCCcCHHHHHHHHHHHHHcCCeEEEeecCC
Confidence 333333334566666653321 111126788999999999987 4443
No 163
>3v5c_A Mandelate racemase/muconate lactonizing protein; enolase fold, galacturonate dehydratase, double Mg site, LYA; 1.53A {Paenibacillus SP} PDB: 3v5f_A* 3p3b_A* 3ops_A* 3n4f_A* 3qpe_A*
Probab=42.64 E-value=58 Score=27.91 Aligned_cols=79 Identities=10% Similarity=-0.002 Sum_probs=53.2
Q ss_pred ccEEEeccCCCCCCHHHHHHHHHHHHHc------CcccEEeccCCcHHHHHHHhccCCcceeccccCCccccc--hhchH
Q 025789 32 IDLYYQHRVDTSVSIEDTMGELKKLVEE------GKIKYIGLSEASADTIRRAHAVHPITAVQMEYSLWTREI--EDDII 103 (248)
Q Consensus 32 iDl~~lH~~~~~~~~~~~~~~l~~l~~~------G~ir~iGvS~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~--~~~~~ 103 (248)
.++.++-.|-+ .. ++.+.++++. +.--+.|-+.+ ...+.++++...++++|+..+. - .. ...+.
T Consensus 227 ~~l~~iEeP~~-~d----~~~~~~l~~~~~~~~~~ipIa~gE~~~-~~~~~~li~~~a~dii~~d~~~-G-Gitea~kia 298 (392)
T 3v5c_A 227 VNLYWLEAAFH-ED----EALYEDLKEWLGQRGQNVLIADGEGLA-SPHLIEWATRGRVDVLQYDIIW-P-GFTHWMELG 298 (392)
T ss_dssp SCCCEEECSSS-CC----HHHHHHHHHHHHHHTCCCEEEECCSSC-CTTHHHHHHTTSCCEECCBTTT-B-CHHHHHHHH
T ss_pred CCCeEEeCCCC-cC----HHHHHHHHHhhccCCCCCcEECCCccc-HHHHHHHHHcCCCcEEEeCCCC-C-CHHHHHHHH
Confidence 46667777654 22 3344455442 44456667777 6778888888888999998764 2 22 25688
Q ss_pred HHHHHcCCcEEeecc
Q 025789 104 PLCRELGIGIVAYSP 118 (248)
Q Consensus 104 ~~~~~~gi~v~~~~~ 118 (248)
..|+.+|+.++..+.
T Consensus 299 ~~A~~~gv~~~~h~~ 313 (392)
T 3v5c_A 299 EKLDAHGLRSAPHCY 313 (392)
T ss_dssp HHHHHTTCEECCBCC
T ss_pred HHHHHcCCeEEecCC
Confidence 999999999987764
No 164
>3mcm_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase/dihydropteroate...; folate, TIM barrel, synthase, HPPK, DHPS; 2.20A {Francisella tularensis subsp} PDB: 3mcn_A* 3mco_A*
Probab=42.55 E-value=72 Score=28.04 Aligned_cols=107 Identities=13% Similarity=0.081 Sum_probs=63.0
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHhHcCCCcccEEEec-cCCC-CCCHH----HHHHHHHHHHHcC-c---ccEEeccCC
Q 025789 1 MLDGVSIGVKGSPEYVRKCCEASLKRLDVDYIDLYYQH-RVDT-SVSIE----DTMGELKKLVEEG-K---IKYIGLSEA 70 (248)
Q Consensus 1 ~~~~~~~~~~~s~~~i~~~~e~SL~rL~~d~iDl~~lH-~~~~-~~~~~----~~~~~l~~l~~~G-~---ir~iGvS~~ 70 (248)
|.|+| ++.+.+.+..++ +.+=|-|.||+=--- +|.. ..+.+ .++..++.++++. . =--|.|-++
T Consensus 204 FsDgg-----~~~~~al~~A~~-mv~~GAdIIDIGgeSTrPGa~~Vs~~EE~~Rv~pvI~~l~~~~~~~~~~vpISIDT~ 277 (442)
T 3mcm_A 204 FSDGN-----FDDNQRKLNLDE-LIQSGAEIIDIGAESTKPDAKPISIEEEFNKLNEFLEYFKSQLANLIYKPLVSIDTR 277 (442)
T ss_dssp -CCCS-----SCCCHHHHHHHH-HHHHTCSEEEEECCCCCC----CCHHHHHHHHHHHHHHHHHHTTTCSSCCEEEEECC
T ss_pred CCCCC-----CCHHHHHHHHHH-HHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCCCeEEEeCC
Confidence 56777 344555555544 345688999987432 2322 22232 3455577777621 1 135888899
Q ss_pred cHHHHHHHhc--cCCcc-eeccccCCccccchhchHHHHHHcCCcEEeecc
Q 025789 71 SADTIRRAHA--VHPIT-AVQMEYSLWTREIEDDIIPLCRELGIGIVAYSP 118 (248)
Q Consensus 71 ~~~~l~~~~~--~~~~~-~~q~~~~~~~~~~~~~~~~~~~~~gi~v~~~~~ 118 (248)
.++.++++++ .+.-- ++-+ +.. . ..++++.++++|.+++.+.-
T Consensus 278 ~~~VaeaAL~~~aGa~i~INDV--sg~-~--d~~m~~v~a~~g~~vVlMh~ 323 (442)
T 3mcm_A 278 KLEVMQKILAKHHDIIWMINDV--ECN-N--IEQKAQLIAKYNKKYVIIHN 323 (442)
T ss_dssp CHHHHHHHHHHHGGGCCEEEEC--CCT-T--HHHHHHHHHHHTCEEEEECC
T ss_pred CHHHHHHHHhhCCCCCEEEEcC--CCC-C--ChHHHHHHHHhCCeEEEECC
Confidence 9999999987 43211 2222 221 1 36789999999999998643
No 165
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=42.48 E-value=22 Score=27.35 Aligned_cols=66 Identities=15% Similarity=0.112 Sum_probs=46.0
Q ss_pred HHHHHHHHHHHHHc-CcccEEeccCCc--HHHHHHHhccCCcceeccccCCccccchhchHHHHHHcCCcEEee
Q 025789 46 IEDTMGELKKLVEE-GKIKYIGLSEAS--ADTIRRAHAVHPITAVQMEYSLWTREIEDDIIPLCRELGIGIVAY 116 (248)
Q Consensus 46 ~~~~~~~l~~l~~~-G~ir~iGvS~~~--~~~l~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~gi~v~~~ 116 (248)
.-+++++|..+++. ++|..+|..|.. ...+..++. .+..+..|+--+. ....+..+++.|+.++.-
T Consensus 80 ~~Dil~al~~a~~~~~kIavvg~~~~~~~~~~~~~ll~---~~i~~~~~~~~~e--~~~~i~~l~~~G~~vvVG 148 (196)
T 2q5c_A 80 RFDTMRAVYNAKRFGNELALIAYKHSIVDKHEIEAMLG---VKIKEFLFSSEDE--ITTLISKVKTENIKIVVS 148 (196)
T ss_dssp HHHHHHHHHHHGGGCSEEEEEEESSCSSCHHHHHHHHT---CEEEEEEECSGGG--HHHHHHHHHHTTCCEEEE
T ss_pred HhHHHHHHHHHHhhCCcEEEEeCcchhhHHHHHHHHhC---CceEEEEeCCHHH--HHHHHHHHHHCCCeEEEC
Confidence 56899999999986 668888888764 455555554 3455555543222 256889999999999763
No 166
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=42.19 E-value=54 Score=26.11 Aligned_cols=63 Identities=10% Similarity=-0.038 Sum_probs=34.4
Q ss_pred HHHHcCcc--cEEeccCCc-----HHHHHHHhccCCcceeccccCCccccchhchHHHHHHcCCcEEeecc
Q 025789 55 KLVEEGKI--KYIGLSEAS-----ADTIRRAHAVHPITAVQMEYSLWTREIEDDIIPLCRELGIGIVAYSP 118 (248)
Q Consensus 55 ~l~~~G~i--r~iGvS~~~-----~~~l~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~gi~v~~~~~ 118 (248)
..+..|+. ..+|+++++ .....+.+....++.+++....+... ..++...++++|+.+.+..+
T Consensus 16 ~~~~~~~~m~mklg~~~~~~~~~~~~~~l~~~~~~G~~~vEl~~~~~~~~-~~~~~~~l~~~gl~v~~~~~ 85 (287)
T 3kws_A 16 GSDKTGKDLELKLSFQEGIAPGESLNEKLDFMEKLGVVGFEPGGGGLAGR-VNEIKQALNGRNIKVSAICA 85 (287)
T ss_dssp -------CCCCEEEEETTSSCCSSHHHHHHHHHHTTCCEEECBSTTCGGG-HHHHHHHHTTSSCEECEEEC
T ss_pred cCcccCCcceeeEEEEecccCCCCHHHHHHHHHHcCCCEEEecCCchHHH-HHHHHHHHHHcCCeEEEEec
Confidence 34455553 467877653 34444444446677777766533322 25678888889998876543
No 167
>1vp8_A Hypothetical protein AF0103; putative pyruvate kinase, structural genomics, joint center structural genomics, JCSG; HET: MSE FMN; 1.30A {Archaeoglobus fulgidus} SCOP: c.49.1.2
Probab=42.16 E-value=76 Score=24.58 Aligned_cols=88 Identities=20% Similarity=0.259 Sum_probs=48.3
Q ss_pred EEEeccCCCCCCHHHHHH-HHHHHHHcCcccEEeccCCcHHHHHHHhcc-CCcceeccccCCccc-----cchhchHHHH
Q 025789 34 LYYQHRVDTSVSIEDTMG-ELKKLVEEGKIKYIGLSEASADTIRRAHAV-HPITAVQMEYSLWTR-----EIEDDIIPLC 106 (248)
Q Consensus 34 l~~lH~~~~~~~~~~~~~-~l~~l~~~G~ir~iGvS~~~~~~l~~~~~~-~~~~~~q~~~~~~~~-----~~~~~~~~~~ 106 (248)
++|.-.|..+. .+++++ +.+++++.| |++|=|.+.+.+-..++.+. ..+..+-+.++.-.. .+..+.....
T Consensus 17 ~~YF~~~G~eN-T~~tl~la~era~e~~-Ik~iVVAS~sG~TA~k~~e~~~~i~lVvVTh~~GF~~pg~~e~~~e~~~~L 94 (201)
T 1vp8_A 17 IVYFNKPGREN-TEETLRLAVERAKELG-IKHLVVASSYGDTAMKALEMAEGLEVVVVTYHTGFVREGENTMPPEVEEEL 94 (201)
T ss_dssp CEEESSCSGGG-HHHHHHHHHHHHHHHT-CCEEEEECSSSHHHHHHHHHCTTCEEEEEECCTTSSSTTCCSSCHHHHHHH
T ss_pred EEEecCCCccc-HHHHHHHHHHHHHHcC-CCEEEEEeCCChHHHHHHHHhcCCeEEEEeCcCCCCCCCCCcCCHHHHHHH
Confidence 34444444332 445554 455555555 88988877654443333332 122333333333222 2347889999
Q ss_pred HHcCCcEEeeccccccc
Q 025789 107 RELGIGIVAYSPLGRGF 123 (248)
Q Consensus 107 ~~~gi~v~~~~~l~~G~ 123 (248)
++.|+.++..+=+.+|+
T Consensus 95 ~~~G~~V~t~tH~lsgv 111 (201)
T 1vp8_A 95 RKRGAKIVRQSHILSGL 111 (201)
T ss_dssp HHTTCEEEECCCTTTTT
T ss_pred HhCCCEEEEEeccccch
Confidence 99999998866555553
No 168
>3stp_A Galactonate dehydratase, putative; PSI biology, structural genomics, NEW YORK structural genomi research consortium; 1.88A {Labrenzia aggregata iam 12614} PDB: 3sqs_A 3ssz_A
Probab=41.54 E-value=25 Score=30.50 Aligned_cols=97 Identities=10% Similarity=0.093 Sum_probs=62.0
Q ss_pred CCHHHHHHHHHHHHhHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCccc-EEeccCCcHHHHHHHhccCCcceecc
Q 025789 11 GSPEYVRKCCEASLKRLDVDYIDLYYQHRVDTSVSIEDTMGELKKLVEEGKIK-YIGLSEASADTIRRAHAVHPITAVQM 89 (248)
Q Consensus 11 ~s~~~i~~~~e~SL~rL~~d~iDl~~lH~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvS~~~~~~l~~~~~~~~~~~~q~ 89 (248)
++.+...+ +-+.|+.+++++| ..|-+. +-++.+.+++++-.|. ..|=+-++...++++++...++++|+
T Consensus 241 ~~~~~Ai~-~~~~Le~~~i~~i-----EeP~~~----~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~li~~~a~D~v~i 310 (412)
T 3stp_A 241 WNLDYAKR-MLPKLAPYEPRWL-----EEPVIA----DDVAGYAELNAMNIVPISGGEHEFSVIGCAELINRKAVSVLQY 310 (412)
T ss_dssp SCHHHHHH-HHHHHGGGCCSEE-----ECCSCT----TCHHHHHHHHHTCSSCEEECTTCCSHHHHHHHHHTTCCSEECC
T ss_pred CCHHHHHH-HHHHHHhcCCCEE-----ECCCCc----ccHHHHHHHHhCCCCCEEeCCCCCCHHHHHHHHHcCCCCEEec
Confidence 34444433 2344555555443 444322 2356677777775553 44556678999999998888899888
Q ss_pred ccCCccc-cchhchHHHHHHcCCcEEeec
Q 025789 90 EYSLWTR-EIEDDIIPLCRELGIGIVAYS 117 (248)
Q Consensus 90 ~~~~~~~-~~~~~~~~~~~~~gi~v~~~~ 117 (248)
..+..-. .....+...|+.+|+.++..+
T Consensus 311 k~~~~GGit~a~kia~~A~a~gi~v~~h~ 339 (412)
T 3stp_A 311 DTNRVGGITAAQKINAIAEAAQIPVIPHA 339 (412)
T ss_dssp CHHHHTHHHHHHHHHHHHHHHTCCBCCSS
T ss_pred ChhhcCCHHHHHHHHHHHHHcCCEEEecc
Confidence 7654321 112568899999999998876
No 169
>2nyg_A YOKD protein; PFAM02522, NYSGXRC, aminoglycoside 3-N- acetyltransferase, PSI-2, structural genomics, protein structure initiative; HET: COA; 2.60A {Bacillus subtilis} SCOP: c.140.1.2
Probab=41.33 E-value=31 Score=28.22 Aligned_cols=47 Identities=21% Similarity=0.167 Sum_probs=33.7
Q ss_pred HHHHHHHHhHcCCCcccEEEeccCCCC-----CCHHHHHHHHHHHHH-cCccc
Q 025789 17 RKCCEASLKRLDVDYIDLYYQHRVDTS-----VSIEDTMGELKKLVE-EGKIK 63 (248)
Q Consensus 17 ~~~~e~SL~rL~~d~iDl~~lH~~~~~-----~~~~~~~~~l~~l~~-~G~ir 63 (248)
+++|.+.|+.||+.-=|.+++|..-.. -..+.++++|.+++- +|-+-
T Consensus 15 ~~~L~~~L~~LGI~~Gd~llVHsSl~~lG~v~gg~~~vi~AL~~~vg~~GTLv 67 (273)
T 2nyg_A 15 KQSITEDLKALGLKKGMTVLVHSSLSSIGWVNGGAVAVIQALIDVVTEEGTIV 67 (273)
T ss_dssp HHHHHHHHHHHTCCTTCEEEEEECSGGGCCBTTHHHHHHHHHHHHHTTTSEEE
T ss_pred HHHHHHHHHHcCCCCCCEEEEEechHHhCCCCCCHHHHHHHHHHHhCCCCeEE
Confidence 345777889999999999999986221 224567888888774 56543
No 170
>2qul_A D-tagatose 3-epimerase; beta/alpha barrel, isomerase; 1.79A {Pseudomonas cichorii} PDB: 2ou4_A 2qum_A* 2qun_A*
Probab=40.94 E-value=1.1e+02 Score=24.17 Aligned_cols=42 Identities=7% Similarity=0.187 Sum_probs=26.0
Q ss_pred HHhccCCcceeccccCCccc---cchhchHHHHHHcCCcEEeecc
Q 025789 77 RAHAVHPITAVQMEYSLWTR---EIEDDIIPLCRELGIGIVAYSP 118 (248)
Q Consensus 77 ~~~~~~~~~~~q~~~~~~~~---~~~~~~~~~~~~~gi~v~~~~~ 118 (248)
+.+....++.+++....... ....++...++++|+.+.+..+
T Consensus 24 ~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~ 68 (290)
T 2qul_A 24 KRIAGLGFDLMEISLGEFHNLSDAKKRELKAVADDLGLTVMCCIG 68 (290)
T ss_dssp HHHHHTTCSEEEEESTTGGGSCHHHHHHHHHHHHHHTCEEEEEEE
T ss_pred HHHHHhCCCEEEEecCCccccchhhHHHHHHHHHHcCCceEEecC
Confidence 33344556777765432211 1125788999999999988653
No 171
>3tji_A Mandelate racemase/muconate lactonizing enzyme, N domain protein; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.80A {Enterobacter SP}
Probab=40.27 E-value=37 Score=29.49 Aligned_cols=70 Identities=11% Similarity=0.089 Sum_probs=44.9
Q ss_pred HHHHHHHHHcCccc-EEeccCCcHHHHHHHhccCCcceeccccCCcccc-chhchHHHHHHcCCcEEeeccc
Q 025789 50 MGELKKLVEEGKIK-YIGLSEASADTIRRAHAVHPITAVQMEYSLWTRE-IEDDIIPLCRELGIGIVAYSPL 119 (248)
Q Consensus 50 ~~~l~~l~~~G~ir-~iGvS~~~~~~l~~~~~~~~~~~~q~~~~~~~~~-~~~~~~~~~~~~gi~v~~~~~l 119 (248)
++.+.++++.-.|- ..|=+-++...++++++...++++|+..+-.-.- ....+..+|+.+|+.++.+++.
T Consensus 262 ~~~~~~l~~~~~iPIa~dE~~~~~~~~~~ll~~ga~d~v~~k~~~~GGit~~~kia~lA~a~gv~v~~h~~~ 333 (422)
T 3tji_A 262 SAWLEQVRQQSCVPLALGELFNNPAEWHDLIVNRRIDFIRCHVSQIGGITPALKLAHLCQAFGVRLAWHGPG 333 (422)
T ss_dssp GGGHHHHHHHCCCCEEECTTCCSGGGTHHHHHTTCCSEECCCGGGGTSHHHHHHHHHHHHHTTCEECCCCCS
T ss_pred HHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHhcCCCCEEecCccccCCHHHHHHHHHHHHHcCCEEEecCCC
Confidence 44455555543332 3344556677777777777778888766543211 1256889999999999887763
No 172
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=40.24 E-value=64 Score=25.43 Aligned_cols=66 Identities=15% Similarity=0.032 Sum_probs=44.5
Q ss_pred HHHHHHHHHHHHHc-CcccEEeccCCcH--HHHHHHhccCCcceeccccCCccccchhchHHHHHHcCCcEEee
Q 025789 46 IEDTMGELKKLVEE-GKIKYIGLSEASA--DTIRRAHAVHPITAVQMEYSLWTREIEDDIIPLCRELGIGIVAY 116 (248)
Q Consensus 46 ~~~~~~~l~~l~~~-G~ir~iGvS~~~~--~~l~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~gi~v~~~ 116 (248)
.-+++++|..+++. ++|..+|..+... ..+..++ ..+..+..|+--+. ....+..+++.|+.++.-
T Consensus 92 ~~Dil~aL~~a~~~~~kIavVg~~~~~~~~~~i~~ll---~~~i~~~~~~~~ee--~~~~i~~l~~~G~~vVVG 160 (225)
T 2pju_A 92 GYDVLQFLAKAGKLTSSIGVVTYQETIPALVAFQKTF---NLRLDQRSYITEED--ARGQINELKANGTEAVVG 160 (225)
T ss_dssp HHHHHHHHHHTTCTTSCEEEEEESSCCHHHHHHHHHH---TCCEEEEEESSHHH--HHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHHHhhCCcEEEEeCchhhhHHHHHHHHh---CCceEEEEeCCHHH--HHHHHHHHHHCCCCEEEC
Confidence 46789999999876 6788888888753 3344443 34455555543222 267888999999998764
No 173
>4a35_A Mitochondrial enolase superfamily member 1; isomerase; 1.74A {Homo sapiens}
Probab=39.75 E-value=1.1e+02 Score=26.69 Aligned_cols=81 Identities=5% Similarity=0.035 Sum_probs=54.3
Q ss_pred cEEEeccCCCCCCHHHHHHHHHHHHHc----CcccEEeccCCcHHHHHHHhccCCcceeccccCCccc-cchhchHHHHH
Q 025789 33 DLYYQHRVDTSVSIEDTMGELKKLVEE----GKIKYIGLSEASADTIRRAHAVHPITAVQMEYSLWTR-EIEDDIIPLCR 107 (248)
Q Consensus 33 Dl~~lH~~~~~~~~~~~~~~l~~l~~~----G~ir~iGvS~~~~~~l~~~~~~~~~~~~q~~~~~~~~-~~~~~~~~~~~ 107 (248)
+++++-.|-... -++.+.++++. +.=-..|=+.++...+..+++...++++|+..+-.-. .....+..+|+
T Consensus 272 ~~~~iEeP~~~~----d~~~~~~l~~~l~~~~iPIa~gE~~~~~~~~~~~l~~~a~div~~d~~~~GGit~~~kia~lA~ 347 (441)
T 4a35_A 272 KPLWIEEPTSPD----DILGHATISKALVPLGIGIATGEQCHNRVIFKQLLQAKALQFLQIDSCRLGSVNENLSVLLMAK 347 (441)
T ss_dssp CCSEEECCSCTT----CHHHHHHHHHHHGGGTCEEEECTTCCSHHHHHHHHHTTCCSEECCCTTTSSHHHHHHHHHHHHH
T ss_pred CccEEeCCCCcc----cHHHHHHHHHhccCCCCCEEeCCccccHHHHHHHHHcCCCCEEEECccccCCHHHHHHHHHHHH
Confidence 455555554322 24455555553 3335667788899999999988889999987765432 11257889999
Q ss_pred HcCCcEEeec
Q 025789 108 ELGIGIVAYS 117 (248)
Q Consensus 108 ~~gi~v~~~~ 117 (248)
.+|+.+..++
T Consensus 348 ~~gv~v~~H~ 357 (441)
T 4a35_A 348 KFEIPVCPHA 357 (441)
T ss_dssp HTTCCBCCCC
T ss_pred HcCCEEEEeC
Confidence 9999986553
No 174
>3go2_A Putative L-alanine-DL-glutamate epimerase; structural genomics, isomerase, PSI-2; 1.70A {Burkholderia xenovorans} PDB: 2oo6_A 3sn0_A 3sn1_A* 3sn4_A*
Probab=39.45 E-value=41 Score=29.06 Aligned_cols=65 Identities=5% Similarity=-0.021 Sum_probs=43.7
Q ss_pred HHHHHHHHHcCccc-EEeccCCcHHHHHHHhccCCcceeccccCCccccc--hhchHHHHHHcCCcEEee
Q 025789 50 MGELKKLVEEGKIK-YIGLSEASADTIRRAHAVHPITAVQMEYSLWTREI--EDDIIPLCRELGIGIVAY 116 (248)
Q Consensus 50 ~~~l~~l~~~G~ir-~iGvS~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~--~~~~~~~~~~~gi~v~~~ 116 (248)
++.+.++++.-.|- ..|=|-++...++++++....+++|+..+. ... ...+...|+++|+.++..
T Consensus 251 ~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~~k~~~--GGit~~~~ia~~A~~~gi~~~~h 318 (409)
T 3go2_A 251 PQGLAYVRNHSPHPISSCETLFGIREFKPFFDANAVDVAIVDTIW--NGVWQSMKIAAFADAHDINVAPH 318 (409)
T ss_dssp HHHHHHHHHTCSSCEEECTTCCHHHHHHHHHHTTCCSEEEECHHH--HCHHHHHHHHHHHHHTTCEEEEC
T ss_pred HHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHhCCCCEEEeCCCC--CCHHHHHHHHHHHHHcCCEEeec
Confidence 44455566554443 334455677888888888888888887643 211 156889999999999874
No 175
>3va8_A Probable dehydratase; enolase, magnesium binding site, lyase; 2.00A {Gibberella zeae}
Probab=38.59 E-value=40 Score=29.60 Aligned_cols=83 Identities=10% Similarity=0.230 Sum_probs=56.4
Q ss_pred EEEeccCCCCCCHHHHHHHHHHHHHcCcc-cEEeccCCcHHHHHHHhccCCcceeccccCCccc-cchhchHHHHHHcCC
Q 025789 34 LYYQHRVDTSVSIEDTMGELKKLVEEGKI-KYIGLSEASADTIRRAHAVHPITAVQMEYSLWTR-EIEDDIIPLCRELGI 111 (248)
Q Consensus 34 l~~lH~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvS~~~~~~l~~~~~~~~~~~~q~~~~~~~~-~~~~~~~~~~~~~gi 111 (248)
+.++-.|- + -++.+.++++.-.| -..|-|.++...+.++++...++++|+..+-.-. .....+...|+.+|+
T Consensus 263 l~~iEeP~---~---d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~div~~d~~~~GGitea~kia~lA~~~gv 336 (445)
T 3va8_A 263 VEYLEDPA---G---EIEGMAAVAKEASMPLATNMAVVAFDHLPPSILQDAVQVILSDHHFWGGLRKSQTLASICATWGL 336 (445)
T ss_dssp CSEEESCB---S---HHHHHHHHHTTCSSCEEESSSCCSGGGHHHHHHTTCCSEEEECHHHHTSHHHHHHHHHHHHHHTC
T ss_pred cCeEeecC---c---CHHHHHHHHHcCCCCEEeCCccCCHHHHHHHHHcCCCCEEEecchhcCCHHHHHHHHHHHHHcCC
Confidence 55565552 1 36677777766444 3556677788888888888888888886443221 112678999999999
Q ss_pred cEEeecccccc
Q 025789 112 GIVAYSPLGRG 122 (248)
Q Consensus 112 ~v~~~~~l~~G 122 (248)
.+..++....|
T Consensus 337 ~v~~h~~~e~~ 347 (445)
T 3va8_A 337 RLSMHSNSHLG 347 (445)
T ss_dssp EEEECCCSCCH
T ss_pred EEEEeCCcccH
Confidence 99988776544
No 176
>3ugv_A Enolase; enzyme function initiative, EFI, lyase; 2.30A {Alpha proteobacterium BAL199}
Probab=38.52 E-value=42 Score=28.80 Aligned_cols=70 Identities=11% Similarity=-0.023 Sum_probs=49.2
Q ss_pred HHHHHHHHHcCcc-cEEeccCCcHHHHHHHhccCCcceeccccCCccc-cchhchHHHHHHcCCcEEeeccc
Q 025789 50 MGELKKLVEEGKI-KYIGLSEASADTIRRAHAVHPITAVQMEYSLWTR-EIEDDIIPLCRELGIGIVAYSPL 119 (248)
Q Consensus 50 ~~~l~~l~~~G~i-r~iGvS~~~~~~l~~~~~~~~~~~~q~~~~~~~~-~~~~~~~~~~~~~gi~v~~~~~l 119 (248)
++.+.++++.-.| -..|=|-++...+.++++...++++|+.....-. .....+...|+++|+.++..+.+
T Consensus 259 ~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~~~~i~~~A~~~gi~~~~h~~~ 330 (390)
T 3ugv_A 259 FDGYAQLRHDLKTPLMIGENFYGPREMHQALQAGACDLVMPDFMRIGGVSGWMRAAGVAGAWGIPMSTHLYP 330 (390)
T ss_dssp HHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCCSEECCBHHHHTHHHHHHHHHHHHHHHTCCBCCBSCH
T ss_pred HHHHHHHHHhcCCCEEeCCCcCCHHHHHHHHHcCCCCEEEeCccccCCHHHHHHHHHHHHHcCCEEeecCHH
Confidence 4566677765444 3456677888999999888888888886554321 11257889999999999776543
No 177
>4g8t_A Glucarate dehydratase; enolase, enzyme function INI EFI, structural genomics, lyase; 1.70A {Actinobacillus succinogenes} PDB: 1ec7_A 1ec8_A* 1ec9_A* 1ecq_A* 1jdf_A* 3pwi_A* 1jct_A* 3pwg_A* 1bqg_A
Probab=38.15 E-value=18 Score=32.05 Aligned_cols=73 Identities=8% Similarity=0.112 Sum_probs=48.7
Q ss_pred HHHHHHHHHcCcc-cEEeccCCcHHHHHHHhccCCcceeccccCCccccchhchHHHHHHcCCcEEeecccccc
Q 025789 50 MGELKKLVEEGKI-KYIGLSEASADTIRRAHAVHPITAVQMEYSLWTREIEDDIIPLCRELGIGIVAYSPLGRG 122 (248)
Q Consensus 50 ~~~l~~l~~~G~i-r~iGvS~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~gi~v~~~~~l~~G 122 (248)
.+.+.++++.-.| -+.|-+.++...+.++++...++++|.....---.....+...|+.+|+.+...+-..++
T Consensus 290 ~e~~a~lr~~~~iPIa~gE~~~~~~~~~~~i~~~avdi~~~d~~~GGit~~~kia~lA~~~gi~v~~h~~~~~~ 363 (464)
T 4g8t_A 290 REIMAEFRRATGLPTATNMIATDWRQMGHTISLQSVDIPLADPHFWTMQGSIRVAQMCHEWGLTWGSHSNNHFD 363 (464)
T ss_dssp HHHHHHHHHHHCCCEEESSSSCSHHHHHHHHHHTCCSEEBCCHHHHCHHHHHHHHHHHHHHTCCCBCCCCSCCH
T ss_pred HHHHHhhhccCCCCccccccccchhhHHHHHHhhCCCEEeccccccchHHHHHHHHHHHHcCCEEEEcCCcccH
Confidence 3445555554333 466778888999988888888888887632210011267889999999999887655433
No 178
>3vcn_A Mannonate dehydratase; enolase, magnesium binding site, enzyme function initiative, lyase; 1.45A {Caulobacter crescentus} PDB: 4gme_A* 4fi4_A 3thu_A
Probab=38.10 E-value=17 Score=31.76 Aligned_cols=68 Identities=6% Similarity=-0.096 Sum_probs=42.7
Q ss_pred HHHHHHHcCccc-EEeccCCcHHHHHHHhccCCcceeccccCCccc-cchhchHHHHHHcCCcEEeeccc
Q 025789 52 ELKKLVEEGKIK-YIGLSEASADTIRRAHAVHPITAVQMEYSLWTR-EIEDDIIPLCRELGIGIVAYSPL 119 (248)
Q Consensus 52 ~l~~l~~~G~ir-~iGvS~~~~~~l~~~~~~~~~~~~q~~~~~~~~-~~~~~~~~~~~~~gi~v~~~~~l 119 (248)
.+.++++.-.|- ..|=+-++...++++++...++++|+..+..-. .....+...|+++|+.++..+..
T Consensus 269 ~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~~~ 338 (425)
T 3vcn_A 269 GFRLIRQHTTTPLAVGEIFAHVWDAKQLIEEQLIDYLRATVLHAGGITNLKKIAAFADLHHVKTGCHGAT 338 (425)
T ss_dssp HHHHHHHHCCSCEEECTTCCSGGGTHHHHHTTCCSEECCCTTTTTHHHHHHHHHHHHGGGTCEECCCCCT
T ss_pred HHHHHHhcCCCCEEeCCCcCCHHHHHHHHHcCCCCeEecChhhcCCHHHHHHHHHHHHHcCCEEeeccCC
Confidence 344444443332 233345566667777777777888777665321 11256889999999999887765
No 179
>2okt_A OSB synthetase, O-succinylbenzoic acid synthetase; enolase, structural genom protein structure initiative, PSI, nysgrc; 1.30A {Staphylococcus aureus subsp} PDB: 2ola_A 3h70_A
Probab=37.86 E-value=26 Score=29.37 Aligned_cols=86 Identities=12% Similarity=-0.035 Sum_probs=56.7
Q ss_pred ccEEEeccCCCCCCHHHHHHHHHHHHHcCcccEEeccCCcHHHHHHHhccCCcceeccccCCccc-cchhchHHHHHHcC
Q 025789 32 IDLYYQHRVDTSVSIEDTMGELKKLVEEGKIKYIGLSEASADTIRRAHAVHPITAVQMEYSLWTR-EIEDDIIPLCRELG 110 (248)
Q Consensus 32 iDl~~lH~~~~~~~~~~~~~~l~~l~~~G~ir~iGvS~~~~~~l~~~~~~~~~~~~q~~~~~~~~-~~~~~~~~~~~~~g 110 (248)
.++.++-.|-+... ++.+.+ ++.+.=-..|=|.++...+.++++...++++|+.....-. .....+...|+++|
T Consensus 191 ~~i~~iEqP~~~~d----~~~~~~-~~~~ipIa~dEs~~~~~~~~~~i~~~a~d~i~~k~~~~GGit~~~~ia~~A~~~g 265 (342)
T 2okt_A 191 EQVLYIEEPFKDIS----MLDEVA-DGTIPPIALDEKATSLLDIINLIELYNVKVVVLKPFRLGGIDKVQTAIDTLKSHG 265 (342)
T ss_dssp GCEEEEECCCSSGG----GGGGSC-TTSSCCEEESTTCCCHHHHHHHHHHSCCCEEEECHHHHTSGGGHHHHHHHHHHTT
T ss_pred CCCcEEECCCCCcc----HHHHHH-hcCCCCEEecCCCCCHHHHHHHHHhCCCCEEEEChhhcCCHHHHHHHHHHHHHCC
Confidence 47778877754322 222222 2223334566678889999999888888899886544221 11257889999999
Q ss_pred CcEEeecccccc
Q 025789 111 IGIVAYSPLGRG 122 (248)
Q Consensus 111 i~v~~~~~l~~G 122 (248)
+.++..+.+.++
T Consensus 266 i~~~~~~~~es~ 277 (342)
T 2okt_A 266 AKVVIGGMYEYG 277 (342)
T ss_dssp CEEEEBCSSCCH
T ss_pred CEEEEcCCcccH
Confidence 999998776654
No 180
>3vdg_A Probable glucarate dehydratase; enolase, magnesium binding site, lyase; 1.90A {Mycobacterium smegmatis str} PDB: 3vfc_A*
Probab=36.05 E-value=48 Score=29.09 Aligned_cols=83 Identities=14% Similarity=0.263 Sum_probs=55.1
Q ss_pred EEEeccCCCCCCHHHHHHHHHHHHHcCcc-cEEeccCCcHHHHHHHhccCCcceeccccCCccc-cchhchHHHHHHcCC
Q 025789 34 LYYQHRVDTSVSIEDTMGELKKLVEEGKI-KYIGLSEASADTIRRAHAVHPITAVQMEYSLWTR-EIEDDIIPLCRELGI 111 (248)
Q Consensus 34 l~~lH~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvS~~~~~~l~~~~~~~~~~~~q~~~~~~~~-~~~~~~~~~~~~~gi 111 (248)
+.++-.|-+ -++.+.++++.-.| -..|-|.++..++.++++...++++|+..+..-. .....+...|+++|+
T Consensus 265 l~~iEeP~~------~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~a~div~~d~~~~GGitea~kia~lA~~~gv 338 (445)
T 3vdg_A 265 LEYLEDPTP------GLDGMAEVAAQAPMPLATNMCVVAFDQLPAAVAKNSVQVVLSDHHYWGGLQRSRLLAGICDTFGL 338 (445)
T ss_dssp CSEEECCSS------SHHHHHHHHHHCSSCEEESSSCCSGGGHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHHTC
T ss_pred HHeeeCCCC------CHHHHHHHHhcCCCCEEcCCcCCCHHHHHHHHHcCCCCEEeeCcceeCCHHHHHHHHHHHHHcCC
Confidence 566666632 24566667665443 3556677788888888887778888875443221 112578999999999
Q ss_pred cEEeecccccc
Q 025789 112 GIVAYSPLGRG 122 (248)
Q Consensus 112 ~v~~~~~l~~G 122 (248)
.+..++....|
T Consensus 339 ~v~~h~~~e~~ 349 (445)
T 3vdg_A 339 GLSMHSNSHLG 349 (445)
T ss_dssp EEEECCCSCCH
T ss_pred EEEEeCCcchH
Confidence 99988765433
No 181
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=36.02 E-value=58 Score=28.68 Aligned_cols=63 Identities=16% Similarity=0.234 Sum_probs=44.7
Q ss_pred hHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCcccEEecc-CCcHHHHHHHhccCCcceecccc
Q 025789 25 KRLDVDYIDLYYQHRVDTSVSIEDTMGELKKLVEEGKIKYIGLS-EASADTIRRAHAVHPITAVQMEY 91 (248)
Q Consensus 25 ~rL~~d~iDl~~lH~~~~~~~~~~~~~~l~~l~~~G~ir~iGvS-~~~~~~l~~~~~~~~~~~~q~~~ 91 (248)
.++|.||+=+++.-........+.+-+... ...+..+||- |.+++.+.++.+...++.+|+.=
T Consensus 272 ~~~Gad~iGfIf~~~SpR~V~~~~a~~i~~----~~~v~~VgVFvn~~~~~i~~~~~~~~ld~vQLHG 335 (452)
T 1pii_A 272 YDAGAIYGGLIFVATSPRCVNVEQAQEVMA----AAPLQYVGVFRNHDIADVVDKAKVLSLAAVQLHG 335 (452)
T ss_dssp HHHTCSEEEEECCTTCTTBCCHHHHHHHHH----HCCCEEEEEESSCCHHHHHHHHHHHTCSEEEECS
T ss_pred HhcCCCEEEeecCCCCCCCCCHHHHHHHHh----cCCCCEEEEEeCCCHHHHHHHHHhcCCCEEEECC
Confidence 467999999987533333344444333322 2579999996 66899999999988999999864
No 182
>3sma_A FRBF; N-acetyl transferase, acetyl COA binding, transferase; HET: ACO; 2.00A {Streptomyces rubellomurinus}
Probab=34.94 E-value=65 Score=26.52 Aligned_cols=51 Identities=18% Similarity=0.185 Sum_probs=37.5
Q ss_pred HHHHHHHHhHcCCCcccEEEeccCCCCCC-----HHHHHHHHHHHH-HcCcccEEec
Q 025789 17 RKCCEASLKRLDVDYIDLYYQHRVDTSVS-----IEDTMGELKKLV-EEGKIKYIGL 67 (248)
Q Consensus 17 ~~~~e~SL~rL~~d~iDl~~lH~~~~~~~-----~~~~~~~l~~l~-~~G~ir~iGv 67 (248)
+++|.+.|+.||+.-=|++++|..-.... .+.++++|.+++ ++|-+---..
T Consensus 24 ~~~L~~~L~~LGI~~Gd~llVHsSL~~lG~v~Gga~~vi~AL~~~vg~~GTLvmPt~ 80 (286)
T 3sma_A 24 RDRLASDLAALGVRPGGVLLVHASLSALGWVCGGAQAVVLALQDAVGKEGTLVMPTF 80 (286)
T ss_dssp HHHHHHHHHHHTCCTTCEEEEEECSTTSCEETTHHHHHHHHHHHHHCTTCEEEEECC
T ss_pred HHHHHHHHHHcCCCCCCEEEEEechHHhCCCCCCHHHHHHHHHHHhcCCCEEEEecc
Confidence 46678889999999999999998643322 456788888887 4676554443
No 183
>4hv0_A AVTR; ribbon-helix-helix, DNA, transcription, viral protein; 2.60A {Acidianus filamentous virus 6}
Probab=34.50 E-value=57 Score=22.26 Aligned_cols=27 Identities=22% Similarity=0.262 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHh
Q 025789 155 LLYTRLETLAAKYGCTTPQLALAWLLH 181 (248)
Q Consensus 155 ~~~~~l~~ia~~~~~s~~q~al~~~l~ 181 (248)
+.++.++.+|++.|+|+++++=+.+..
T Consensus 8 slY~~LkelAe~EGvSvSav~RkLL~E 34 (106)
T 4hv0_A 8 EVYEFLKKKAKEEGTSVPAVIRKILKE 34 (106)
T ss_dssp HHHHHHHHHHHHTTSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 356799999999999999988666543
No 184
>3tcs_A Racemase, putative; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, TIM barrel; HET: PG4; 1.88A {Roseobacter denitrificans} PDB: 3u4f_A 3t9p_A 3t8q_A
Probab=34.05 E-value=66 Score=27.54 Aligned_cols=69 Identities=13% Similarity=0.157 Sum_probs=45.5
Q ss_pred HHHHHHHHHcCcc-cEEeccCCcHHHHHHHhccCCcceeccccCCccc-cchhchHHHHHHcCCcEEeecc
Q 025789 50 MGELKKLVEEGKI-KYIGLSEASADTIRRAHAVHPITAVQMEYSLWTR-EIEDDIIPLCRELGIGIVAYSP 118 (248)
Q Consensus 50 ~~~l~~l~~~G~i-r~iGvS~~~~~~l~~~~~~~~~~~~q~~~~~~~~-~~~~~~~~~~~~~gi~v~~~~~ 118 (248)
++.+.++++.-.| -..|=|.++...+.++++...++++|+..+-.-. .....+..+|+.+|+.++..+.
T Consensus 239 ~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~d~~~~GGit~a~kia~~A~~~gv~~~~h~~ 309 (388)
T 3tcs_A 239 LAQTKQVTDALDIDVTGGEQDCDLPTWQRMIDMRAVDIVQPDILYLGGICRTLRVVEMARAAGLPVTPHCA 309 (388)
T ss_dssp HHHHHHHHHHCSSCEEECTTCCCHHHHHHHHHHTCCSEECCCHHHHTSHHHHHHHHHHHHHTTCCBCCCCC
T ss_pred HHHHHHHHHhcCCCEEcCCccCCHHHHHHHHHcCCCCEEEeCccccCCHHHHHHHHHHHHHcCCEEEecCC
Confidence 4445555554333 3445566788888888887778888876543221 1125788999999999987654
No 185
>3qxb_A Putative xylose isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 1.90A {Rhodospirillum rubrum}
Probab=33.85 E-value=1.3e+02 Score=24.21 Aligned_cols=54 Identities=15% Similarity=0.026 Sum_probs=34.1
Q ss_pred EEeccCCc--------HHHHHHHhccCCcceeccccCCcccc--------chhchHHHHHHcCCcEEeec
Q 025789 64 YIGLSEAS--------ADTIRRAHAVHPITAVQMEYSLWTRE--------IEDDIIPLCRELGIGIVAYS 117 (248)
Q Consensus 64 ~iGvS~~~--------~~~l~~~~~~~~~~~~q~~~~~~~~~--------~~~~~~~~~~~~gi~v~~~~ 117 (248)
.+|+++.. .+.+.+......++.+|+........ ...++...++++|+.+.+..
T Consensus 21 ~lgi~~~~~~~~~~~~~~~~~~~a~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gl~i~~~~ 90 (316)
T 3qxb_A 21 KLGVNLCFAVKRWLEPDRLAGLVRDDLGLEYVQYTYDLTDPWWPDIERDRRAIAYAKAFRKAGLTIESTF 90 (316)
T ss_dssp CEEEEGGGGTTTSCSHHHHHHHHHHTSCCCEEEEETTTSCTTSCHHHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred cceecchHHHhccCCHHHHHHHHHHHcCCCEEEeeccccCccccccchhhHHHHHHHHHHHcCCeEEEee
Confidence 47777532 23334455567788888876543321 12567889999999997653
No 186
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=33.78 E-value=87 Score=24.73 Aligned_cols=52 Identities=12% Similarity=0.029 Sum_probs=31.4
Q ss_pred hchHHHHHHcCCcEEeeccccccccccccccCCCCchhhhhcCCCCCchhhHHHHHHHHHHHHHHHHhCCC
Q 025789 100 DDIIPLCRELGIGIVAYSPLGRGFFAGKAVVESLPSESILAMHPRFSGENLEKNKLLYTRLETLAAKYGCT 170 (248)
Q Consensus 100 ~~~~~~~~~~gi~v~~~~~l~~G~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ia~~~~~s 170 (248)
...++.|++.|...+...|-..+ .. ......+....+.+..+.++|+++|+.
T Consensus 87 ~~~i~~A~~lG~~~v~~~~g~~~-------~~------------~~~~~~~~~~~~~l~~l~~~a~~~Gv~ 138 (286)
T 3dx5_A 87 EQLAILANWFKTNKIRTFAGQKG-------SA------------DFSQQERQEYVNRIRMICELFAQHNMY 138 (286)
T ss_dssp HHHHHHHHHHTCCEEEECSCSSC-------GG------------GSCHHHHHHHHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHHHhCCCEEEEcCCCCC-------cc------------cCcHHHHHHHHHHHHHHHHHHHHhCCE
Confidence 56889999999988864321100 00 011223355566777888888888874
No 187
>3vc5_A Mandelate racemase/muconate lactonizing protein; dehydratase, magnesium binding, enzyme function initiative, enolase, isomerase; 1.50A {Thermobispora bispora} PDB: 3vc6_A 4dhg_A
Probab=33.59 E-value=51 Score=28.87 Aligned_cols=83 Identities=17% Similarity=0.281 Sum_probs=54.3
Q ss_pred EEEeccCCCCCCHHHHHHHHHHHHHcCcc-cEEeccCCcHHHHHHHhccCCcceeccccCCccc-cchhchHHHHHHcCC
Q 025789 34 LYYQHRVDTSVSIEDTMGELKKLVEEGKI-KYIGLSEASADTIRRAHAVHPITAVQMEYSLWTR-EIEDDIIPLCRELGI 111 (248)
Q Consensus 34 l~~lH~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvS~~~~~~l~~~~~~~~~~~~q~~~~~~~~-~~~~~~~~~~~~~gi 111 (248)
+.++-.|-+ -++.+.++++.-.| -..|-|.++..++.++++...++++|+...-.-. .....+...|+.+|+
T Consensus 260 l~~iEeP~~------~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~a~dii~~d~~~~GGitea~kia~lA~~~gv 333 (441)
T 3vc5_A 260 LEYLEDPTP------GIDGMARVAAEVPMPLATNMCVVTPEHLPAAVERRPIGVLLIDHHYWGGLVRSAHIATLCATFGI 333 (441)
T ss_dssp CSEEECCSS------SHHHHHHHHTTSSSCEEESSSCCSGGGHHHHHHHCCCSEEEECHHHHTSHHHHHHHHHHHHHTTC
T ss_pred HHHhhccCC------CHHHHHHHHhcCCCCEEeCCCCCCHHHHHHHHHhCCCCEEeechhhcCCHHHHHHHHHHHHHcCC
Confidence 556666632 24566666665333 3556677778888888877778888875443221 112578999999999
Q ss_pred cEEeecccccc
Q 025789 112 GIVAYSPLGRG 122 (248)
Q Consensus 112 ~v~~~~~l~~G 122 (248)
.+..++....|
T Consensus 334 ~v~~h~~~e~~ 344 (441)
T 3vc5_A 334 ELSMHSNSHLG 344 (441)
T ss_dssp EEEECCCSCCH
T ss_pred EEEecCCcccH
Confidence 99988765433
No 188
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=33.52 E-value=35 Score=26.91 Aligned_cols=22 Identities=9% Similarity=-0.182 Sum_probs=14.7
Q ss_pred hhHHHHHHHHHHHHHHHHhCCC
Q 025789 149 NLEKNKLLYTRLETLAAKYGCT 170 (248)
Q Consensus 149 ~~~~~~~~~~~l~~ia~~~~~s 170 (248)
......+.+..+.++|+++|+.
T Consensus 117 ~~~~~~~~l~~l~~~a~~~gv~ 138 (275)
T 3qc0_A 117 ARRMVVEGIAAVLPHARAAGVP 138 (275)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHHHHcCCE
Confidence 4455566667777777777765
No 189
>2hk0_A D-psicose 3-epimerase; TIM-barrel, isomerase; 2.00A {Agrobacterium tumefaciens} PDB: 2hk1_A*
Probab=32.79 E-value=85 Score=25.31 Aligned_cols=40 Identities=13% Similarity=-0.028 Sum_probs=25.0
Q ss_pred ccCCcceeccccC-Cccc--cchhchHHHHHHcCCcEEeeccc
Q 025789 80 AVHPITAVQMEYS-LWTR--EIEDDIIPLCRELGIGIVAYSPL 119 (248)
Q Consensus 80 ~~~~~~~~q~~~~-~~~~--~~~~~~~~~~~~~gi~v~~~~~l 119 (248)
....++.+++... +... ....++...++++|+.+.+..++
T Consensus 46 ~~~G~~~vEl~~~~~~~~~~~~~~~l~~~l~~~gl~i~~~~~~ 88 (309)
T 2hk0_A 46 AKLGFDIIEVAAHHINEYSDAELATIRKSAKDNGIILTAGIGP 88 (309)
T ss_dssp HHTTCSEEEEEHHHHTTSCHHHHHHHHHHHHHTTCEEEEECCC
T ss_pred HHhCCCEEEeccCCccccchhhHHHHHHHHHHcCCeEEEecCC
Confidence 3345677766432 1110 11256888999999999986665
No 190
>4abx_A DNA repair protein RECN; DNA binding protein, ATP binding protein, double break repair, coiled-coil; HET: DNA; 2.04A {Deinococcus radiodurans}
Probab=32.57 E-value=52 Score=24.67 Aligned_cols=31 Identities=26% Similarity=0.339 Sum_probs=25.8
Q ss_pred CCchhhHHHHHHHHHHHHHHHHhCCCHHHHH
Q 025789 145 FSGENLEKNKLLYTRLETLAAKYGCTTPQLA 175 (248)
Q Consensus 145 ~~~~~~~~~~~~~~~l~~ia~~~~~s~~q~a 175 (248)
|.+..+.....++..+..++++||.++.++.
T Consensus 119 ~DP~rL~~ie~RL~~l~~L~RKyg~~~eell 149 (175)
T 4abx_A 119 ADPEALDRVEARLSALSKLKNKYGPTLEDVV 149 (175)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHCSSHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCCHHHHH
Confidence 4556678888999999999999999988753
No 191
>2gwg_A 4-oxalomesaconate hydratase; TIM-barrel like protein, structural genomics, PSI, protein S initiative; 1.80A {Rhodopseudomonas palustris} SCOP: c.1.9.15
Probab=31.45 E-value=2.2e+02 Score=23.39 Aligned_cols=71 Identities=10% Similarity=-0.036 Sum_probs=40.2
Q ss_pred HHHHHHHHHHc--CcccEEeccCC--------cHHHHHHHhccCCcceeccccCC---------ccccchhchHHHHHHc
Q 025789 49 TMGELKKLVEE--GKIKYIGLSEA--------SADTIRRAHAVHPITAVQMEYSL---------WTREIEDDIIPLCREL 109 (248)
Q Consensus 49 ~~~~l~~l~~~--G~ir~iGvS~~--------~~~~l~~~~~~~~~~~~q~~~~~---------~~~~~~~~~~~~~~~~ 109 (248)
.-+.+.++.++ +++..+|+-.. ..++++++.+...+..+.+..+. ++...-..+++.|.+.
T Consensus 92 ~N~~~~~~~~~~p~rf~~~~~~p~~~~~~~~~a~~eL~r~~~~~g~~Gv~l~~~~~~~~~~~~~l~d~~~~p~~~~a~e~ 171 (350)
T 2gwg_A 92 CNELCYRVSQLFPDNFIGAAMLPQSPGVDPKTCIPELEKCVKEYGFVAINLNPDPSGGHWTSPPLTDRIWYPIYEKMVEL 171 (350)
T ss_dssp HHHHHHHHHHHSTTTEEEEEECCCCTTSCGGGGHHHHHHHHHTSCCCEEEECSCTTSSCCCSCCTTSGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCcEEEEEeCCCCCCCCHHHHHHHHHHHHhccCCeEEEECCCCCCccCCCCCCCCHHHHHHHHHHHHc
Confidence 34455666655 34444444221 24667777755455555553221 2222226789999999
Q ss_pred CCcEEeeccc
Q 025789 110 GIGIVAYSPL 119 (248)
Q Consensus 110 gi~v~~~~~l 119 (248)
|+.|+.+..-
T Consensus 172 ~lpv~iH~~~ 181 (350)
T 2gwg_A 172 EIPAMIHVST 181 (350)
T ss_dssp TCCEEECCCC
T ss_pred CCeEEECCCC
Confidence 9999987553
No 192
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=31.24 E-value=1.9e+02 Score=22.59 Aligned_cols=53 Identities=11% Similarity=0.106 Sum_probs=31.9
Q ss_pred cEEeccCC-----cHHHHHHHhccCCcceeccccCCccccchhchHHHHHHcCCcEEeec
Q 025789 63 KYIGLSEA-----SADTIRRAHAVHPITAVQMEYSLWTREIEDDIIPLCRELGIGIVAYS 117 (248)
Q Consensus 63 r~iGvS~~-----~~~~l~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~gi~v~~~~ 117 (248)
|+.+.+++ +.+...+.+....++.+++.+. .... ..++...++++|+.+.+..
T Consensus 11 ~~~~~~~~~f~~~~~~~~l~~~~~~G~~~vEl~~~-~~~~-~~~~~~~l~~~gl~~~~~~ 68 (269)
T 3ngf_A 11 RFAANLSTMFNEVPFLERFRLAAEAGFGGVEFLFP-YDFD-ADVIARELKQHNLTQVLFN 68 (269)
T ss_dssp EEEEETTTSCTTSCHHHHHHHHHHTTCSEEECSCC-TTSC-HHHHHHHHHHTTCEEEEEE
T ss_pred ceeeechhhhccCCHHHHHHHHHHcCCCEEEecCC-ccCC-HHHHHHHHHHcCCcEEEEe
Confidence 44555543 3444444444455677776542 2222 2678899999999998754
No 193
>1wue_A Mandelate racemase/muconate lactonizing enzyme FA protein; structural genomics, unknown function, nysgxrc target T2185; 2.10A {Enterococcus faecalis} SCOP: c.1.11.2 d.54.1.1
Probab=30.44 E-value=39 Score=28.82 Aligned_cols=87 Identities=13% Similarity=0.028 Sum_probs=58.2
Q ss_pred ccEEEeccCCCCCCHHHHHHHHHHHHHcCcc-cEEeccCCcHHHHHHHhccCCcceeccccCCcccc-chhchHHHHHHc
Q 025789 32 IDLYYQHRVDTSVSIEDTMGELKKLVEEGKI-KYIGLSEASADTIRRAHAVHPITAVQMEYSLWTRE-IEDDIIPLCREL 109 (248)
Q Consensus 32 iDl~~lH~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvS~~~~~~l~~~~~~~~~~~~q~~~~~~~~~-~~~~~~~~~~~~ 109 (248)
.++.++-.|-... -++.+.+++++-.| -..|=|.++...+.++++...++++|+..+-.-.- ....+...|+++
T Consensus 227 ~~i~~iEqP~~~~----d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~a~d~i~ik~~~~GGit~~~~i~~~A~~~ 302 (386)
T 1wue_A 227 YQLAMIEQPFAAD----DFLDHAQLQRELKTRICLDENIRSLKDCQVALALGSCRSINLKIPRVGGIHEALKIAAFCQEN 302 (386)
T ss_dssp SCCSCEECCSCTT----CSHHHHHHHTTCSSCEEECTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHT
T ss_pred CCCeEEeCCCCcc----cHHHHHHHHHhcCCCEEeCCccCCHHHHHHHHHcCCCCEEEEchhhhCCHHHHHHHHHHHHHC
Confidence 3566666664432 24556666665444 34556777889999998888888888866543211 125788999999
Q ss_pred CCcEEeecccccc
Q 025789 110 GIGIVAYSPLGRG 122 (248)
Q Consensus 110 gi~v~~~~~l~~G 122 (248)
|+.++..+.+.+|
T Consensus 303 gi~~~~~~~~es~ 315 (386)
T 1wue_A 303 DLLVWLGGMFESG 315 (386)
T ss_dssp TCEEEECCCCCCH
T ss_pred CCeEEECCCcccH
Confidence 9999877666544
No 194
>2jwk_A Protein TOLR; periplasmic domain, membrane, inner membrane, protein transport, transmembrane, transport, membrane protein; NMR {Haemophilus influenzae} PDB: 2jwl_A
Probab=30.23 E-value=36 Score=21.09 Aligned_cols=47 Identities=15% Similarity=0.126 Sum_probs=30.6
Q ss_pred CCHHHHHHHHHHHHhHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCc
Q 025789 11 GSPEYVRKCCEASLKRLDVDYIDLYYQHRVDTSVSIEDTMGELKKLVEEGK 61 (248)
Q Consensus 11 ~s~~~i~~~~e~SL~rL~~d~iDl~~lH~~~~~~~~~~~~~~l~~l~~~G~ 61 (248)
.+.+.+...+.+.+..= -|.-.+=..|...+.+.+++.|..+++.|.
T Consensus 27 v~~~~L~~~l~~~~~~~----~~~~V~I~aD~~~~y~~vv~vmd~l~~aG~ 73 (74)
T 2jwk_A 27 LTEEMVTQLSRQEFDKD----NNTLFLVGGAKEVPYEEVIKALNLLHLAGI 73 (74)
T ss_dssp ECHHHHHHHHHHHHHHC----TTCCEEEEECTTSCHHHHHHHHHHHHHTTC
T ss_pred cCHHHHHHHHHHHHhhC----CCceEEEEcCCCCCHHHHHHHHHHHHHcCC
Confidence 35566666665554432 232222345778889999999999999884
No 195
>2a6c_A Helix-turn-helix motif; putative transcriptional regulator, structural genomics, JOI for structural genomics, JCSG; HET: CIT; 1.90A {Nitrosomonas europaea} SCOP: a.35.1.13
Probab=29.61 E-value=44 Score=21.24 Aligned_cols=27 Identities=19% Similarity=-0.004 Sum_probs=19.4
Q ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHh
Q 025789 155 LLYTRLETLAAKYGCTTPQLALAWLLH 181 (248)
Q Consensus 155 ~~~~~l~~ia~~~~~s~~q~al~~~l~ 181 (248)
.....+..+.++.|+|..++|-+.-++
T Consensus 18 ~~~~~l~~~r~~~glsq~elA~~~gis 44 (83)
T 2a6c_A 18 QLLIVLQEHLRNSGLTQFKAAELLGVT 44 (83)
T ss_dssp HHHHHHHHHHHTTTCCHHHHHHHHTSC
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHCcC
Confidence 344678888888899988888664333
No 196
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=29.58 E-value=61 Score=27.67 Aligned_cols=70 Identities=14% Similarity=0.013 Sum_probs=41.6
Q ss_pred HHHHHHHhHcCCCcccEEEeccCCCCCCHH-HHHHHHHHHHHcCcccEEeccCCcHHHHHHHhccCCcceeccc
Q 025789 18 KCCEASLKRLDVDYIDLYYQHRVDTSVSIE-DTMGELKKLVEEGKIKYIGLSEASADTIRRAHAVHPITAVQME 90 (248)
Q Consensus 18 ~~~e~SL~rL~~d~iDl~~lH~~~~~~~~~-~~~~~l~~l~~~G~ir~iGvS~~~~~~l~~~~~~~~~~~~q~~ 90 (248)
..+-+.|+..|+|||++ |......... .-++.+..+++.=.+--|++...+++..+++++....|.|++-
T Consensus 258 ~~la~~le~~Gvd~i~v---~~~~~~~~~~~~~~~~~~~ik~~~~iPvi~~Ggi~~~~a~~~l~~g~aD~V~ig 328 (377)
T 2r14_A 258 FYLAGELDRRGLAYLHF---NEPDWIGGDITYPEGFREQMRQRFKGGLIYCGNYDAGRAQARLDDNTADAVAFG 328 (377)
T ss_dssp HHHHHHHHHTTCSEEEE---ECCC------CCCTTHHHHHHHHCCSEEEEESSCCHHHHHHHHHTTSCSEEEES
T ss_pred HHHHHHHHHcCCCEEEE---eCCcccCCCCcchHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHCCCceEEeec
Confidence 34566777788776665 4321100000 0234455666665667777777778888888887777777663
No 197
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=29.55 E-value=1.3e+02 Score=25.08 Aligned_cols=70 Identities=13% Similarity=0.031 Sum_probs=37.3
Q ss_pred HHHHHhHcCCCcccEEEeccCCC--CCCHHHHHHHHHHHHHcCcccEEeccCC-cHHHHHHHhccCCcceecc
Q 025789 20 CEASLKRLDVDYIDLYYQHRVDT--SVSIEDTMGELKKLVEEGKIKYIGLSEA-SADTIRRAHAVHPITAVQM 89 (248)
Q Consensus 20 ~e~SL~rL~~d~iDl~~lH~~~~--~~~~~~~~~~l~~l~~~G~ir~iGvS~~-~~~~l~~~~~~~~~~~~q~ 89 (248)
+-+.|+..|+|||++---..... .......++.+.++++.=.+--+++.+. +++..+++++.+..|.+++
T Consensus 234 ~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~~Ggi~s~~~a~~~l~~G~aD~V~i 306 (338)
T 1z41_A 234 FAKWMKEQGVDLIDCSSGALVHADINVFPGYQVSFAEKIREQADMATGAVGMITDGSMAEEILQNGRADLIFI 306 (338)
T ss_dssp HHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHCCEEEECSSCCSHHHHHHHHHTTSCSEEEE
T ss_pred HHHHHHHcCCCEEEEecCccccCCCCCCccchHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHcCCceEEee
Confidence 45567777877766532211000 0011112344444554445666666666 6777777777766666655
No 198
>2zvr_A Uncharacterized protein TM_0416; hyperthermophIle, ketohexose 3-epimeras tagatose 3-epimerase, isomerase; 2.20A {Thermotoga maritima}
Probab=29.27 E-value=1.4e+02 Score=23.59 Aligned_cols=38 Identities=18% Similarity=0.052 Sum_probs=24.5
Q ss_pred cCCcceeccccCCccccchhchHHHHHHcCCcEEeecc
Q 025789 81 VHPITAVQMEYSLWTREIEDDIIPLCRELGIGIVAYSP 118 (248)
Q Consensus 81 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~gi~v~~~~~ 118 (248)
...++.+++...-.......++...++++|+.+.+..+
T Consensus 52 ~~G~~~vEl~~~~~~~~~~~~~~~~l~~~gl~~~~~~~ 89 (290)
T 2zvr_A 52 RVGYQAVEIAVRDPSIVDWNEVKILSEELNLPICAIGT 89 (290)
T ss_dssp HHTCSEEEEECSCGGGSCHHHHHHHHHHHTCCEEEEEC
T ss_pred HhCCCEEEEcCCCcchhhHHHHHHHHHHcCCeEEEEec
Confidence 34577777754321111126788999999999977654
No 199
>3dxi_A Putative aldolase; TIM barrel, 11107N, PSI2, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Bacteroides vulgatus atcc 8482}
Probab=29.03 E-value=2.5e+02 Score=23.29 Aligned_cols=108 Identities=9% Similarity=0.116 Sum_probs=58.7
Q ss_pred CCCCCHHHHHHHHHHHHhHcCCCcccEEEeccCCCCCC-HHH--HHHHHHHHHHcCcccEEecc---CCcHHHHHHHhc-
Q 025789 8 GVKGSPEYVRKCCEASLKRLDVDYIDLYYQHRVDTSVS-IED--TMGELKKLVEEGKIKYIGLS---EASADTIRRAHA- 80 (248)
Q Consensus 8 ~~~~s~~~i~~~~e~SL~rL~~d~iDl~~lH~~~~~~~-~~~--~~~~l~~l~~~G~ir~iGvS---~~~~~~l~~~~~- 80 (248)
...++.+...+ +-+.|.++|+++|.+.+.-.|..... .-. -++.|+.+++...++.-.+. |..++.+..+..
T Consensus 18 ~~~~~~~~k~~-ia~~L~~aGv~~IEvg~~~~p~~~f~~~~~~~~~e~l~~i~~~~~~~~~~L~r~~~~~~~dv~~~~~a 96 (320)
T 3dxi_A 18 NWDFNSKIVDA-YILAMNELPIDYLEVGYRNKPSKEYMGKFGYTPVSVLKHLRNISTKKIAIMLNEKNTTPEDLNHLLLP 96 (320)
T ss_dssp TTCCCHHHHHH-HHHHHHTTTCCEEEEEECCSCCSSCCCHHHHCCHHHHHHHHHHCCSEEEEEEEGGGCCGGGHHHHHGG
T ss_pred CCcCCHHHHHH-HHHHHHHhCCCEEEEecccCCccccccccccChHHHHHHHhhccCCeEEEEecCCCCChhhHHHHHHh
Confidence 35566666665 55678999999999998765543211 100 13444444433445555542 222233433321
Q ss_pred -cCCcceeccccCCccccchhchHHHHHHcCCcEEee
Q 025789 81 -VHPITAVQMEYSLWTREIEDDIIPLCRELGIGIVAY 116 (248)
Q Consensus 81 -~~~~~~~q~~~~~~~~~~~~~~~~~~~~~gi~v~~~ 116 (248)
...++.+.+..++-+-....+.+.+++++|+.+...
T Consensus 97 ~~~Gvd~~ri~~~~~nle~~~~~v~~ak~~G~~v~~~ 133 (320)
T 3dxi_A 97 IIGLVDMIRIAIDPQNIDRAIVLAKAIKTMGFEVGFN 133 (320)
T ss_dssp GTTTCSEEEEEECGGGHHHHHHHHHHHHTTTCEEEEE
T ss_pred hhcCCCEEEEEecHHHHHHHHHHHHHHHHCCCEEEEE
Confidence 245666655554432111256778899999887653
No 200
>4h2h_A Mandelate racemase/muconate lactonizing enzyme; enolase, mandelate racemase subgroup, enzyme function initia EFI, structural genomics; HET: 0XW; 1.70A {Pelagibaca bermudensis} PDB: 2pmq_A*
Probab=29.03 E-value=53 Score=27.89 Aligned_cols=73 Identities=14% Similarity=0.106 Sum_probs=49.5
Q ss_pred HHHHHHHHHcCcc-cEEeccCCcHHHHHHHhccCCcceeccccCCcccc-chhchHHHHHHcCCcEEeecccccc
Q 025789 50 MGELKKLVEEGKI-KYIGLSEASADTIRRAHAVHPITAVQMEYSLWTRE-IEDDIIPLCRELGIGIVAYSPLGRG 122 (248)
Q Consensus 50 ~~~l~~l~~~G~i-r~iGvS~~~~~~l~~~~~~~~~~~~q~~~~~~~~~-~~~~~~~~~~~~gi~v~~~~~l~~G 122 (248)
++.+..+++.-.+ -..|=|.++...+.++++..-++++|+...-.-.- ....+...|+.+|+.++..+.+.++
T Consensus 233 ~~~~~~l~~~~~~pia~dE~~~~~~~~~~~~~~~~~d~v~~d~~~~GGit~~~~ia~~a~~~gi~~~~~~~~~~~ 307 (376)
T 4h2h_A 233 FEDLEAIRPLCHHALYMDEDGTSLNTVITAAATSLVDGFGMKVSRIGGLQHMRAFRDFCAARNLPHTCDDAWGGD 307 (376)
T ss_dssp HHHHHHHGGGCCSCEEESTTCCSHHHHHHHHHTTCCSEECCBHHHHTSHHHHHHHHHHHHHHTCCEECBCSSCSH
T ss_pred hhhHhhhhhcccCccccCcccCCHHHHHHHHHhhccCccccccceeCCcHHHHHHHHHHHHcCCCEEeCCCCccH
Confidence 3445666655443 34566778888888888888788888754332110 1156788999999999988777654
No 201
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=28.96 E-value=1.3e+02 Score=22.52 Aligned_cols=88 Identities=19% Similarity=0.185 Sum_probs=50.4
Q ss_pred CHHHHHHHHHHHHhHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHc-CcccEEeccC-CcHHHHHHHhccCCcceecc
Q 025789 12 SPEYVRKCCEASLKRLDVDYIDLYYQHRVDTSVSIEDTMGELKKLVEE-GKIKYIGLSE-ASADTIRRAHAVHPITAVQM 89 (248)
Q Consensus 12 s~~~i~~~~e~SL~rL~~d~iDl~~lH~~~~~~~~~~~~~~l~~l~~~-G~ir~iGvS~-~~~~~l~~~~~~~~~~~~q~ 89 (248)
+.+.+.+- -+.+.+-|. |++-+|...+ ...+. ++.+++. |+-..||+++ .++++++++.+.+ .|++ +
T Consensus 20 ~~~~~~~~-~~~~~~~G~---~~iev~~~~~--~~~~~---i~~ir~~~~~~~~ig~~~v~~~~~~~~a~~~G-ad~i-v 88 (205)
T 1wa3_A 20 SVEEAKEK-ALAVFEGGV---HLIEITFTVP--DADTV---IKELSFLKEKGAIIGAGTVTSVEQCRKAVESG-AEFI-V 88 (205)
T ss_dssp SHHHHHHH-HHHHHHTTC---CEEEEETTST--THHHH---HHHTHHHHHTTCEEEEESCCSHHHHHHHHHHT-CSEE-E
T ss_pred CHHHHHHH-HHHHHHCCC---CEEEEeCCCh--hHHHH---HHHHHHHCCCCcEEEecccCCHHHHHHHHHcC-CCEE-E
Confidence 45554443 344556665 4556665432 22333 4444443 3234688844 6888887776643 3555 2
Q ss_pred ccCCccccchhchHHHHHHcCCcEEe
Q 025789 90 EYSLWTREIEDDIIPLCRELGIGIVA 115 (248)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~gi~v~~ 115 (248)
++.. ..++++.|+++|+.+++
T Consensus 89 --~~~~---~~~~~~~~~~~g~~vi~ 109 (205)
T 1wa3_A 89 --SPHL---DEEISQFCKEKGVFYMP 109 (205)
T ss_dssp --CSSC---CHHHHHHHHHHTCEEEC
T ss_pred --cCCC---CHHHHHHHHHcCCcEEC
Confidence 2211 25689999999999986
No 202
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=28.34 E-value=1.1e+02 Score=20.10 Aligned_cols=21 Identities=10% Similarity=0.110 Sum_probs=9.1
Q ss_pred HHHHHHHHHcCcccEEeccCC
Q 025789 50 MGELKKLVEEGKIKYIGLSEA 70 (248)
Q Consensus 50 ~~~l~~l~~~G~ir~iGvS~~ 70 (248)
++.++.+++...+.-|-+|..
T Consensus 62 ~~~~~~lr~~~~~~ii~~t~~ 82 (120)
T 3f6p_A 62 VEVCREVRKKYDMPIIMLTAK 82 (120)
T ss_dssp HHHHHHHHTTCCSCEEEEEES
T ss_pred HHHHHHHHhcCCCCEEEEECC
Confidence 334444444334444444443
No 203
>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*
Probab=28.00 E-value=1.8e+02 Score=25.79 Aligned_cols=60 Identities=23% Similarity=0.369 Sum_probs=37.6
Q ss_pred CCCHHHHHHHHHHHHhHcCCCcccEE-----------------------EeccCCCCCCHHHHHHHHHHHHHcC--cccE
Q 025789 10 KGSPEYVRKCCEASLKRLDVDYIDLY-----------------------YQHRVDTSVSIEDTMGELKKLVEEG--KIKY 64 (248)
Q Consensus 10 ~~s~~~i~~~~e~SL~rL~~d~iDl~-----------------------~lH~~~~~~~~~~~~~~l~~l~~~G--~ir~ 64 (248)
+.+.+.-.+-++..+ ++|.||||+= -.|..+.....++..+.++++.+.| .++-
T Consensus 75 ~~~~~~~~~ll~~~~-~~~~~yiDvEl~~~~~~~~~~~~~~~~~~kiI~S~H~f~~tp~~~~~~~~~~~~~~~gaDivKi 153 (523)
T 2o7s_A 75 EGDENERRDVLRLAM-ELGADYIDVELQVASEFIKSIDGKKPGKFKVIVSSHNYQNTPSVEDLDGLVARIQQTGADIVKI 153 (523)
T ss_dssp CSCHHHHHHHHHHHH-HHTCSEEEEEHHHHHHHHHHTTTCCCTTCEEEEEEECSSCCCCHHHHHHHHHHHHTTTCSEEEE
T ss_pred CCCHHHHHHHHHHHH-HhCCCEEEEECCCchHHHHHHHHhccCCCEEEEEcccCCCCcCHHHHHHHHHHHHHhCCCEEEE
Confidence 445444444455444 5789999953 2344333344678888899999888 5566
Q ss_pred EeccCC
Q 025789 65 IGLSEA 70 (248)
Q Consensus 65 iGvS~~ 70 (248)
.+.++.
T Consensus 154 a~~a~~ 159 (523)
T 2o7s_A 154 ATTAVD 159 (523)
T ss_dssp EEECSS
T ss_pred EecCCC
Confidence 666654
No 204
>3kto_A Response regulator receiver protein; PSI-II,structural genomics, protein structure initiative; 1.98A {Pseudoalteromonas atlantica T6C} SCOP: c.23.1.0
Probab=27.70 E-value=1.4e+02 Score=20.16 Aligned_cols=68 Identities=15% Similarity=0.085 Sum_probs=34.3
Q ss_pred HHHhHcCCCcccEEEeccCCCCCCH--HHHHHHHHHHHHcC-cccEEeccCCc-HHHHHHHhccCCcceeccccC
Q 025789 22 ASLKRLDVDYIDLYYQHRVDTSVSI--EDTMGELKKLVEEG-KIKYIGLSEAS-ADTIRRAHAVHPITAVQMEYS 92 (248)
Q Consensus 22 ~SL~rL~~d~iDl~~lH~~~~~~~~--~~~~~~l~~l~~~G-~ir~iGvS~~~-~~~l~~~~~~~~~~~~q~~~~ 92 (248)
+.++.+....+|++++-..- +. .+.++.++.+++.+ .+.-|-+|... .+...++.+.+..+++.-+++
T Consensus 41 ~a~~~l~~~~~dlvi~D~~l---~~~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~ga~~~l~KP~~ 112 (136)
T 3kto_A 41 SFMRQQISDDAIGMIIEAHL---EDKKDSGIELLETLVKRGFHLPTIVMASSSDIPTAVRAMRASAADFIEKPFI 112 (136)
T ss_dssp HHTTSCCCTTEEEEEEETTG---GGBTTHHHHHHHHHHHTTCCCCEEEEESSCCHHHHHHHHHTTCSEEEESSBC
T ss_pred HHHHHHhccCCCEEEEeCcC---CCCCccHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHcChHHheeCCCC
Confidence 33444444556777764432 22 34556666666654 45566666553 344445555444444443333
No 205
>3kz3_A Repressor protein CI; five helix bundle, DNA-binding, transcription, transcription regulation; 1.64A {Enterobacteria phage lambda}
Probab=27.45 E-value=59 Score=20.31 Aligned_cols=52 Identities=15% Similarity=0.011 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHhCCCCceeecCCC--ChHhHHHhhcccCC
Q 025789 156 LYTRLETLAAKYGCTTPQLALAWLLHQGDDIVPIPGTT--KITNLDNNIGSLAL 207 (248)
Q Consensus 156 ~~~~l~~ia~~~~~s~~q~al~~~l~~~~v~~~i~G~~--~~~~l~enl~a~~~ 207 (248)
..+.+..+.++.|+|..++|-+.-+++..++-..-|-+ +.+.+....++++.
T Consensus 13 l~~~l~~~r~~~gltq~~lA~~~gvs~~~is~~e~g~~~~~~~~~~~ia~~l~v 66 (80)
T 3kz3_A 13 LKAIWEKKKNELGLSYESVADKMGMGQSAVAALFNGINALNAYNAALLAKILKV 66 (80)
T ss_dssp HHHHHHHHHHHHTCCHHHHHHHTTSCHHHHHHHHTTSSCCCHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHcCCCHHHHHHHhCcCHHHHHHHHcCCCCCCHHHHHHHHHHhCC
Confidence 33456666666677766666543333322222222222 33445555455443
No 206
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=27.42 E-value=1.4e+02 Score=19.79 Aligned_cols=60 Identities=20% Similarity=0.135 Sum_probs=25.2
Q ss_pred hHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHc---CcccEEeccCCc-HHHHHHHhccCCccee
Q 025789 25 KRLDVDYIDLYYQHRVDTSVSIEDTMGELKKLVEE---GKIKYIGLSEAS-ADTIRRAHAVHPITAV 87 (248)
Q Consensus 25 ~rL~~d~iDl~~lH~~~~~~~~~~~~~~l~~l~~~---G~ir~iGvS~~~-~~~l~~~~~~~~~~~~ 87 (248)
+.+.....|++++-..-+... -++.++.+++. ..+.-|-+|... .+...++.+.+-.+++
T Consensus 40 ~~l~~~~~dlvllD~~~p~~~---g~~~~~~l~~~~~~~~~pii~~s~~~~~~~~~~~~~~Ga~~~l 103 (122)
T 3gl9_A 40 EKLSEFTPDLIVLXIMMPVMD---GFTVLKKLQEKEEWKRIPVIVLTAKGGEEDESLALSLGARKVM 103 (122)
T ss_dssp HHHTTBCCSEEEECSCCSSSC---HHHHHHHHHTSTTTTTSCEEEEESCCSHHHHHHHHHTTCSEEE
T ss_pred HHHHhcCCCEEEEeccCCCCc---HHHHHHHHHhcccccCCCEEEEecCCchHHHHHHHhcChhhhc
Confidence 333334456666543322222 23334444433 234555555542 3334444444433333
No 207
>3lte_A Response regulator; structural genomics, PSI, protein structure initiative, NYSG YORK structural genomix research consortium, nysgxrc; 2.00A {Bermanella marisrubri}
Probab=27.38 E-value=81 Score=21.11 Aligned_cols=13 Identities=31% Similarity=0.266 Sum_probs=5.7
Q ss_pred HHHHHHHHHhHcC
Q 025789 16 VRKCCEASLKRLD 28 (248)
Q Consensus 16 i~~~~e~SL~rL~ 28 (248)
+...+.+.|++.|
T Consensus 18 ~~~~l~~~L~~~g 30 (132)
T 3lte_A 18 MAAAIERVLKRDH 30 (132)
T ss_dssp HHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHCC
Confidence 3344444444433
No 208
>3ose_A Serine/threonine-protein kinase MARK1; kinase associated-1(Ka1) domain, transferase, lipid binding membrane association; 1.70A {Homo sapiens} SCOP: d.129.6.1 PDB: 1ul7_A
Probab=27.32 E-value=47 Score=23.40 Aligned_cols=26 Identities=15% Similarity=0.137 Sum_probs=21.8
Q ss_pred CCCCCCHHHHHHHHHHHHhHcCCCcc
Q 025789 7 IGVKGSPEYVRKCCEASLKRLDVDYI 32 (248)
Q Consensus 7 ~~~~~s~~~i~~~~e~SL~rL~~d~i 32 (248)
.+..-+|+.|...|.+.|..+|++|-
T Consensus 33 tTS~~~P~eIm~eI~rvL~~~gi~~~ 58 (120)
T 3ose_A 33 TTSSMDPNDMMREIRKVLDANNCDYE 58 (120)
T ss_dssp CEECSCHHHHHHHHHHHHHHTTCEEE
T ss_pred CcccCCHHHHHHHHHHHHHHCCCEEE
Confidence 34467899999999999999998763
No 209
>3cyj_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, isomerase, PSI-2; 2.30A {Rubrobacter xylanophilus dsm 9941}
Probab=27.27 E-value=2.7e+02 Score=23.23 Aligned_cols=98 Identities=14% Similarity=0.035 Sum_probs=59.7
Q ss_pred CCHHHHHHHHHHHHhHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCc---ccEEeccCCcHHHHHHHhccCCccee
Q 025789 11 GSPEYVRKCCEASLKRLDVDYIDLYYQHRVDTSVSIEDTMGELKKLVEEGK---IKYIGLSEASADTIRRAHAVHPITAV 87 (248)
Q Consensus 11 ~s~~~i~~~~e~SL~rL~~d~iDl~~lH~~~~~~~~~~~~~~l~~l~~~G~---ir~iGvS~~~~~~l~~~~~~~~~~~~ 87 (248)
++.+...+-+++ |+++ .++.+|-.|-... -++.+.+++++-. =-..|=|.++...+.++ ....+++
T Consensus 199 ~~~~~a~~~~~~-l~~~----~~i~~iEqP~~~~----d~~~~~~l~~~~~~~ipIa~dE~~~~~~~~~~~--~~a~d~i 267 (372)
T 3cyj_A 199 YTRKQALYWAGA-FARE----AGISYLEEPVSSE----DREGLRLLRDRGPGGVAIAAGEYEWTLPQLHDL--AGCVDIL 267 (372)
T ss_dssp SCHHHHHHHHHH-HHHH----HCCCEEECSSCTT----CHHHHHHHHHHSCTTCEEEECTTCCSHHHHHHH--HTTCSEE
T ss_pred CCHHHHHHHHHH-HHhh----cCCcEEECCCCcc----cHHHHHHHHHhCCCCCCEECCCCccCHHHHHHH--hCCCCEE
Confidence 455554444433 4443 1555676664433 2455556665433 23445677777888777 5667888
Q ss_pred ccccCCcccc-chhchHHHHHHcCCcEEeeccc
Q 025789 88 QMEYSLWTRE-IEDDIIPLCRELGIGIVAYSPL 119 (248)
Q Consensus 88 q~~~~~~~~~-~~~~~~~~~~~~gi~v~~~~~l 119 (248)
|+..+-.-.- ....+...|+++|+.++..+.+
T Consensus 268 ~ik~~~~GGit~~~~i~~~A~~~gi~~~~~~~~ 300 (372)
T 3cyj_A 268 QADVTRCGGITGLLRVDGICRGHQIPFSAHCAP 300 (372)
T ss_dssp EECTTTTTHHHHHTTHHHHHHHHTCCEEECSCH
T ss_pred ecCchhhCCHHHHHHHHHHHHHcCCeecccchH
Confidence 8876654221 1257899999999999987654
No 210
>2pge_A MENC; OSBS, NYSGXRC, PSI-II, structural genomics, protein structure initiative; 1.60A {Desulfotalea psychrophila LSV54}
Probab=27.23 E-value=42 Score=28.54 Aligned_cols=73 Identities=18% Similarity=0.119 Sum_probs=40.7
Q ss_pred HHHHHHHHHcCccc-EEeccCCcHHH--HHHHhccCCcceeccccCCcccc-chhchHHHHHHcCCcEEeecccccc
Q 025789 50 MGELKKLVEEGKIK-YIGLSEASADT--IRRAHAVHPITAVQMEYSLWTRE-IEDDIIPLCRELGIGIVAYSPLGRG 122 (248)
Q Consensus 50 ~~~l~~l~~~G~ir-~iGvS~~~~~~--l~~~~~~~~~~~~q~~~~~~~~~-~~~~~~~~~~~~gi~v~~~~~l~~G 122 (248)
++.+.+++++-.|. ..|=|.++... +.++++....+++|+..+..-.- ...++..+|+++|+.++..+.+.++
T Consensus 248 ~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~i~~~a~d~i~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~~es~ 324 (377)
T 2pge_A 248 WSEMAALCANSPLAIALDEELIGLGAEQRSAMLDAIRPQYIILKPSLLGGFHYAGQWIELARERGIGFWITSALESN 324 (377)
T ss_dssp HHHHHHHHHHCSSCEEESGGGTTCCTHHHHHHHHHHCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEEBCCSCCH
T ss_pred HHHHHHHHhhCCCcEEECCccCCcchHHHHHHHHhCCCCEEEECchhcCCHHHHHHHHHHHHHCCCeEEecCCcccH
Confidence 44555555543332 33334333333 45555555566666654432111 1256788999999999888776543
No 211
>3ro6_B Putative chloromuconate cycloisomerase; TIM barrel; 2.20A {Methylococcus capsulatus} PDB: 3rit_A
Probab=26.82 E-value=2.7e+02 Score=23.10 Aligned_cols=73 Identities=10% Similarity=-0.095 Sum_probs=47.2
Q ss_pred HHHHHHHHHcCcc-cEEeccCCcHHHHHHHhccC-CcceeccccCCcccc-chhchHHHHHHcCCcEEeecccccc
Q 025789 50 MGELKKLVEEGKI-KYIGLSEASADTIRRAHAVH-PITAVQMEYSLWTRE-IEDDIIPLCRELGIGIVAYSPLGRG 122 (248)
Q Consensus 50 ~~~l~~l~~~G~i-r~iGvS~~~~~~l~~~~~~~-~~~~~q~~~~~~~~~-~~~~~~~~~~~~gi~v~~~~~l~~G 122 (248)
++.+.+++++-.| -..|=|-++..++.++++.. .++++|+..+..-.- ....+..+|+++|+.++..+.+.++
T Consensus 224 ~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~i~~~a~~~gi~~~~~~~~es~ 299 (356)
T 3ro6_B 224 TDWLRALPKAIRRRIAADESLLGPADAFALAAPPAACGIFNIKLMKCGGLAPARRIATIAETAGIDLMWGCMDESR 299 (356)
T ss_dssp HHHHHTSCHHHHHTEEESTTCCSHHHHHHHHSSSCSCSEEEECHHHHCSHHHHHHHHHHHHHHTCEEEECCCSCCH
T ss_pred HHHHHHHHhcCCCCEEeCCcCCCHHHHHHHHhcCCcCCEEEEcccccCCHHHHHHHHHHHHHcCCEEEecCCcccH
Confidence 4444444443233 23445667788888888877 788888865442211 1257889999999999987666543
No 212
>3fnr_A Arginyl-tRNA synthetase; transferase, PSI-2, NYSGXRC, struc genomics, protein structure initiative; 2.20A {Campylobacter jejuni}
Probab=26.39 E-value=87 Score=27.61 Aligned_cols=44 Identities=18% Similarity=0.198 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHhHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCcc
Q 025789 14 EYVRKCCEASLKRLDVDYIDLYYQHRVDTSVSIEDTMGELKKLVEEGKI 62 (248)
Q Consensus 14 ~~i~~~~e~SL~rL~~d~iDl~~lH~~~~~~~~~~~~~~l~~l~~~G~i 62 (248)
+.+.+.+++++++||+.+ |.|.--..-.. .+-+++++|+++|.+
T Consensus 145 ~~~l~~~~~~~~~l~V~f-D~~~~Ess~~~----~~~~vv~~L~~~g~~ 188 (464)
T 3fnr_A 145 DKMLVLIKQNLEQAKIKI-DSYVSERSYYD----ALNATLESLKEHKGI 188 (464)
T ss_dssp HHHHHHHHHHHHHTTCCC-SCEEEGGGGST----THHHHHHHHHHTTCE
T ss_pred HHHHHHHHHHHHHhCCCc-eeecCHHHHHH----HHHHHHHHHHHCCCE
Confidence 445667899999999975 98765532222 344556677777765
No 213
>3p0w_A Mandelate racemase/muconate lactonizing protein; structural genomics, PSI-2, protein structure initiative; HET: GKR; 1.71A {Ralstonia pickettii} PDB: 4hn8_A 3nxl_A
Probab=26.26 E-value=45 Score=29.47 Aligned_cols=71 Identities=14% Similarity=0.171 Sum_probs=46.2
Q ss_pred HHHHHHHHHcCcc-cEEeccCCcHHHHHHHhccCCcceeccccCCccccchhchHHHHHHcCCcEEeecccc
Q 025789 50 MGELKKLVEEGKI-KYIGLSEASADTIRRAHAVHPITAVQMEYSLWTREIEDDIIPLCRELGIGIVAYSPLG 120 (248)
Q Consensus 50 ~~~l~~l~~~G~i-r~iGvS~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~gi~v~~~~~l~ 120 (248)
++.+.++++.-.| -..|-+.++...+.++++...++++|.....---.....+..+|+.+|+.+..++...
T Consensus 288 ~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~a~div~~d~~~GGit~a~kia~lA~a~gv~~~~h~~~e 359 (470)
T 3p0w_A 288 REVMAEFKRATGIPTATNMIATDWRQMGHAVQLHAVDIPLADPHFWTMQGSVRVAQLCDEWGLTWGSHSNNH 359 (470)
T ss_dssp HHHHHHHHHHHCCCEEESSSSCSHHHHHHHHHTTCCSEEBCCHHHHCHHHHHHHHHHHHHHTCCCBCCCCSC
T ss_pred HHHHHHHHhcCCCCEEeCCccCCHHHHHHHHHcCCCCEEEecCccCCHHHHHHHHHHHHHcCCEEEecCCcc
Confidence 4555566654333 3556677788888888888888888875421000112668899999999987665543
No 214
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=26.21 E-value=2.2e+02 Score=23.91 Aligned_cols=66 Identities=17% Similarity=0.077 Sum_probs=38.4
Q ss_pred HHHHHhHcCCCcccEEEecc-CCCCCCHHHHHHHHHHHHHcCcccEEeccCCcHHHHHHHhccCCcceecc
Q 025789 20 CEASLKRLDVDYIDLYYQHR-VDTSVSIEDTMGELKKLVEEGKIKYIGLSEASADTIRRAHAVHPITAVQM 89 (248)
Q Consensus 20 ~e~SL~rL~~d~iDl~~lH~-~~~~~~~~~~~~~l~~l~~~G~ir~iGvS~~~~~~l~~~~~~~~~~~~q~ 89 (248)
+-+.|+..|+|||++--=.+ .....+ ++.+..+++.=.+--|+....+++..+++++....|.|++
T Consensus 256 ~a~~l~~~G~d~i~v~~~~~~~~~~~~----~~~~~~v~~~~~iPvi~~Ggit~~~a~~~l~~g~aD~V~~ 322 (364)
T 1vyr_A 256 LIEELAKRGIAYLHMSETDLAGGKPYS----EAFRQKVRERFHGVIIGAGAYTAEKAEDLIGKGLIDAVAF 322 (364)
T ss_dssp HHHHHHHTTCSEEEEECCBTTBCCCCC----HHHHHHHHHHCCSEEEEESSCCHHHHHHHHHTTSCSEEEE
T ss_pred HHHHHHHhCCCEEEEecCcccCCCccc----HHHHHHHHHHCCCCEEEECCcCHHHHHHHHHCCCccEEEE
Confidence 45667777766665532100 001111 3445556665566677777777788888877776777665
No 215
>3rfa_A Ribosomal RNA large subunit methyltransferase N; radical SAM, S-adenosylmethionine, iron sulfur cluster, oxidoreductase; HET: SAM; 2.05A {Escherichia coli} PDB: 3rf9_A*
Probab=25.40 E-value=3.2e+02 Score=23.44 Aligned_cols=88 Identities=11% Similarity=0.218 Sum_probs=56.0
Q ss_pred EEeccCCC-----------CCCHHHHHHHHHHHH-HcCc------ccEEeccC--CcHHHHHHH---hccCCcceecccc
Q 025789 35 YYQHRVDT-----------SVSIEDTMGELKKLV-EEGK------IKYIGLSE--ASADTIRRA---HAVHPITAVQMEY 91 (248)
Q Consensus 35 ~~lH~~~~-----------~~~~~~~~~~l~~l~-~~G~------ir~iGvS~--~~~~~l~~~---~~~~~~~~~q~~~ 91 (248)
+-||.+++ ..++++++++++++. +.|. |+++=+.+ .+.+++.++ +...+..++-++|
T Consensus 232 iSLka~d~e~~~~i~pv~~~~~le~vl~ai~~~~~~~g~~~~~V~ie~vLI~GvNDs~e~~~~La~ll~~l~~~VnLIpy 311 (404)
T 3rfa_A 232 ISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPW 311 (404)
T ss_dssp EECCCSSHHHHHHHSGGGGTSCHHHHHHHHHHHHHHCTTTTTCEEEEEEEBTTTTCSHHHHHHHHHHTTTSCEEEEEEEC
T ss_pred ecccCCCHHHHHHhcCCccCCCHHHHHHHHHHHHHHhCCCcccEEEEEEEecCCCCCHHHHHHHHHHHHcCCCcEEEEec
Confidence 45888754 245788999996664 4565 56665553 445555554 4444555677889
Q ss_pred CCcccc----ch----hchHHHHHHcCCcEEeecccccc
Q 025789 92 SLWTRE----IE----DDIIPLCRELGIGIVAYSPLGRG 122 (248)
Q Consensus 92 ~~~~~~----~~----~~~~~~~~~~gi~v~~~~~l~~G 122 (248)
|++... +. ..+.+.++++|+.+....+.+..
T Consensus 312 nP~~~~~~~~ps~e~i~~f~~iL~~~Gi~vtiR~~~G~d 350 (404)
T 3rfa_A 312 NPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDD 350 (404)
T ss_dssp CCCTTCCCCBCCHHHHHHHHHHHHHTTCEEEECCCCCC-
T ss_pred cCCCCCCCCCCCHHHHHHHHHHHHHcCCcEEEcCCCCcc
Confidence 986431 11 44567778899999988877654
No 216
>1sfl_A 3-dehydroquinate dehydratase; 3-dehydroquinase, enzyme turnover, shikimate pathway, lyase; 1.90A {Staphylococcus aureus subsp} SCOP: c.1.10.1 PDB: 1sfj_A*
Probab=25.32 E-value=2.5e+02 Score=22.05 Aligned_cols=55 Identities=11% Similarity=0.000 Sum_probs=31.1
Q ss_pred CCCHHHHHHHHHHHHhHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCcccEEeccCC
Q 025789 10 KGSPEYVRKCCEASLKRLDVDYIDLYYQHRVDTSVSIEDTMGELKKLVEEGKIKYIGLSEA 70 (248)
Q Consensus 10 ~~s~~~i~~~~e~SL~rL~~d~iDl~~lH~~~~~~~~~~~~~~l~~l~~~G~ir~iGvS~~ 70 (248)
+.+.+.-.+-++..++.-+.||||+=+-+. ..++.+..+.+..++|.++-|+ |.|
T Consensus 79 ~~~~~~~~~ll~~~~~~~~~d~iDvEl~~~-----~~~~~~~~l~~~~~~~~~kvI~-S~H 133 (238)
T 1sfl_A 79 QFTNDSYLNLISDLANINGIDMIDIEWQAD-----IDIEKHQRIITHLQQYNKEVII-SHH 133 (238)
T ss_dssp CCCHHHHHHHHHHGGGCTTCCEEEEECCTT-----SCHHHHHHHHHHHHHTTCEEEE-EEE
T ss_pred CCCHHHHHHHHHHHHHhCCCCEEEEEccCC-----CChHHHHHHHHHHHhcCCEEEE-Eec
Confidence 456555555555555444799999955321 0224555555555566666665 444
No 217
>2uyg_A 3-dehydroquinate dehydratase; typeii 3-dehydroquinase, lyase; 2.2A {Thermus thermophilus}
Probab=25.15 E-value=1.5e+02 Score=21.77 Aligned_cols=78 Identities=13% Similarity=0.108 Sum_probs=56.2
Q ss_pred CCHHHHHHHHHHHHhHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHc---CcccEEeccCCcHHHHHHHhccCCccee
Q 025789 11 GSPEYVRKCCEASLKRLDVDYIDLYYQHRVDTSVSIEDTMGELKKLVEE---GKIKYIGLSEASADTIRRAHAVHPITAV 87 (248)
Q Consensus 11 ~s~~~i~~~~e~SL~rL~~d~iDl~~lH~~~~~~~~~~~~~~l~~l~~~---G~ir~iGvS~~~~~~l~~~~~~~~~~~~ 87 (248)
.+.+.|.+.+.+.-+.+|++ ++.+|-. .-.++++.+.+...+ |.|-.=|.-+|+.-.+..++......++
T Consensus 24 ~tl~di~~~l~~~a~~~g~~-v~~~QSN------~EgeLId~Ih~a~~~~~dgiIINpgA~THtSvAlrDAl~~v~~P~V 96 (149)
T 2uyg_A 24 TTLEELEALCEAWGAELGLG-VVFRQTN------YEGQLIEWVQQAHQEGFLAIVLNPGALTHYSYALLDAIRAQPLPVV 96 (149)
T ss_dssp CCHHHHHHHHHHHHHHTTCC-EEEEECS------CHHHHHHHHHHTTTTTCSEEEEECGGGGGTCHHHHHHHHTSCSCEE
T ss_pred CCHHHHHHHHHHHHHHcCCE-EEEEeeC------CHHHHHHHHHHhccCCeeEEEEccchhccccHHHHHHHHhCCCCEE
Confidence 46899999999999999984 7777732 356788988888655 4455556667776677777776666677
Q ss_pred ccccCCcc
Q 025789 88 QMEYSLWT 95 (248)
Q Consensus 88 q~~~~~~~ 95 (248)
.+..|=..
T Consensus 97 EVHiSNi~ 104 (149)
T 2uyg_A 97 EVHLTNLH 104 (149)
T ss_dssp EEESSCGG
T ss_pred EEEecCcc
Confidence 77665443
No 218
>2h9a_B CO dehydrogenase/acetyl-COA synthase, iron- sulfur protein; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_B*
Probab=25.14 E-value=2.9e+02 Score=22.80 Aligned_cols=86 Identities=14% Similarity=0.097 Sum_probs=58.3
Q ss_pred HcCCCcccEEEec-cCCC-CCCHHHHHHHHHHHHHc-CcccEEec-cC----CcHHHHHHHhccCC---cceeccccCCc
Q 025789 26 RLDVDYIDLYYQH-RVDT-SVSIEDTMGELKKLVEE-GKIKYIGL-SE----ASADTIRRAHAVHP---ITAVQMEYSLW 94 (248)
Q Consensus 26 rL~~d~iDl~~lH-~~~~-~~~~~~~~~~l~~l~~~-G~ir~iGv-S~----~~~~~l~~~~~~~~---~~~~q~~~~~~ 94 (248)
..|.|.||+-.-- .|+. ..+.++.++.++.+++. +.. |.+ -+ ++++.++++++... +-++-+ +..
T Consensus 85 ~~GAdiIDIg~~StrP~~~~vs~eee~~vV~~v~~~~~vp--lsI~DT~~~~~~~~V~eaal~aga~~k~iINdv--s~~ 160 (310)
T 2h9a_B 85 EYGADIVALRLVSAHPDGQNRSGAELAEVCKAVADAIDVP--LMIIGCGVEEKDAEIFPVIGEALSGRNCLLSSA--TKD 160 (310)
T ss_dssp HTTCSEEEEECGGGCTTTTCCCHHHHHHHHHHHHHHCSSC--EEEECCSCHHHHHHHHHHHHHHTTTSCCEEEEE--CTT
T ss_pred HcCCcEEEEeCccCCCCCCCCCHHHHHHHHHHHHHhCCce--EEEECCCCCCCCHHHHHHHHHhCCCCCCEEEEC--CCC
Confidence 8899999988753 3443 35677778888888876 433 455 55 67888888877632 112222 222
Q ss_pred cccchhchHHHHHHcCCcEEeecc
Q 025789 95 TREIEDDIIPLCRELGIGIVAYSP 118 (248)
Q Consensus 95 ~~~~~~~~~~~~~~~gi~v~~~~~ 118 (248)
+ ..++++.|.++|..++.+.+
T Consensus 161 ~---~~~~~~~aa~~g~~vv~m~~ 181 (310)
T 2h9a_B 161 N---YKPIVATCMVHGHSVVASAP 181 (310)
T ss_dssp T---HHHHHHHHHHHTCEEEEECS
T ss_pred c---cHHHHHHHHHhCCCEEEECh
Confidence 1 36789999999999999876
No 219
>3v7e_A Ribosome-associated protein L7AE-like; RNA-protein complex, K-turn, L7AE-like, A member L7AE/L30E superfamily; HET: SAM; 2.80A {Bacillus subtilis}
Probab=24.91 E-value=1.4e+02 Score=19.11 Aligned_cols=58 Identities=14% Similarity=0.204 Sum_probs=35.2
Q ss_pred HHHHHHcCcccEEeccCCcHHHHHHHhccCCcceeccccCCccccchhchHHHHHHcCCcEEeec
Q 025789 53 LKKLVEEGKIKYIGLSEASADTIRRAHAVHPITAVQMEYSLWTREIEDDIIPLCRELGIGIVAYS 117 (248)
Q Consensus 53 l~~l~~~G~ir~iGvS~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~gi~v~~~~ 117 (248)
++++++.|++.. | ..+..++++......+-+--+.-. .....+..+|++++|+++-+.
T Consensus 3 ~~~~~kagk~~~-G-----~~~v~kai~~gkaklViiA~D~~~-~~~~~i~~lc~~~~Ip~~~v~ 60 (82)
T 3v7e_A 3 YDKVSQAKSIII-G-----TKQTVKALKRGSVKEVVVAKDADP-ILTSSVVSLAEDQGISVSMVE 60 (82)
T ss_dssp HHHHHHCSEEEE-S-----HHHHHHHHTTTCEEEEEEETTSCH-HHHHHHHHHHHHHTCCEEEES
T ss_pred HHHHHHcCCeeE-c-----HHHHHHHHHcCCeeEEEEeCCCCH-HHHHHHHHHHHHcCCCEEEEC
Confidence 566777777532 3 366677776655433333322211 223668899999999998754
No 220
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=24.89 E-value=1.4e+02 Score=20.32 Aligned_cols=13 Identities=23% Similarity=0.061 Sum_probs=6.1
Q ss_pred HHHHHHHHHhHcC
Q 025789 16 VRKCCEASLKRLD 28 (248)
Q Consensus 16 i~~~~e~SL~rL~ 28 (248)
++..+...|++.|
T Consensus 17 ~~~~l~~~L~~~~ 29 (144)
T 3kht_A 17 DIALIRRVLDRKD 29 (144)
T ss_dssp HHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhcC
Confidence 3444445555444
No 221
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=24.78 E-value=46 Score=28.27 Aligned_cols=71 Identities=13% Similarity=0.158 Sum_probs=39.6
Q ss_pred CCHHHHHHHHHHHHHcCcc---c-EEeccCCcHHHHHHHhccCCcceeccccCCccc--------cchhchHHHHHHcCC
Q 025789 44 VSIEDTMGELKKLVEEGKI---K-YIGLSEASADTIRRAHAVHPITAVQMEYSLWTR--------EIEDDIIPLCRELGI 111 (248)
Q Consensus 44 ~~~~~~~~~l~~l~~~G~i---r-~iGvS~~~~~~l~~~~~~~~~~~~q~~~~~~~~--------~~~~~~~~~~~~~gi 111 (248)
-.++-+.+..+.+++.|.- . ++=+-++.++.+.. .... ...+++++.. .....+.++|++.||
T Consensus 18 Gdle~Ak~lI~~A~~aGad~~~d~avKfQt~~~d~l~~--~~~~---~~~~~~~~~~~~~~el~~e~~~~L~~~~~~~Gi 92 (350)
T 3g8r_A 18 GNVEHGVALIRAIRESCQGFDFDFGFKLQYRNLDTFIH--SSFK---GRDDVKYVKRFEETRLQPEQMQKLVAEMKANGF 92 (350)
T ss_dssp TCSHHHHHHHHHHHHHTTTCCSEEEEEEEECCHHHHBC--GGGT---TCCSSSSHHHHHHTCCCHHHHHHHHHHHHHTTC
T ss_pred CcHHHHHHHHHHHHHhCCcccCCeeEEccccchhhhcC--hhcc---CccHHHHHHHHHHhcCCHHHHHHHHHHHHHcCC
Confidence 3455566666677777753 2 66666677665521 0000 0112333221 112678899999999
Q ss_pred cEEeecccc
Q 025789 112 GIVAYSPLG 120 (248)
Q Consensus 112 ~v~~~~~l~ 120 (248)
.+++ +|+.
T Consensus 93 ~~~s-t~fD 100 (350)
T 3g8r_A 93 KAIC-TPFD 100 (350)
T ss_dssp EEEE-EECS
T ss_pred cEEe-ccCC
Confidence 9987 4553
No 222
>2k9i_A Plasmid PRN1, complete sequence; plasmid COPY control protein, ribbon helix helix protein, DNA binding protein; NMR {Sulfolobus islandicus} PDB: 3ft7_A
Probab=24.58 E-value=1.1e+02 Score=17.53 Aligned_cols=23 Identities=17% Similarity=0.076 Sum_probs=18.0
Q ss_pred HHHHHHHHHHHHhCCCHHHHHHH
Q 025789 155 LLYTRLETLAAKYGCTTPQLALA 177 (248)
Q Consensus 155 ~~~~~l~~ia~~~~~s~~q~al~ 177 (248)
+..+.+..+|+..|+|.+++.-.
T Consensus 19 el~~~l~~~a~~~g~s~s~~ir~ 41 (55)
T 2k9i_A 19 EWHDRLMEIAKEKNLTLSDVCRL 41 (55)
T ss_dssp HHHHHHHHHHHHHTCCHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHHH
Confidence 45568999999999998876543
No 223
>4e4f_A Mannonate dehydratase; magnesium binding, enzyme function initiative, isomerase; 2.00A {Pectobacterium carotovorum subsp}
Probab=24.36 E-value=1.1e+02 Score=26.60 Aligned_cols=69 Identities=7% Similarity=-0.067 Sum_probs=43.9
Q ss_pred HHHHHHHHHcCccc-EEeccCCcHHHHHHHhccCCcceeccccCCcccc-chhchHHHHHHcCCcEEeecc
Q 025789 50 MGELKKLVEEGKIK-YIGLSEASADTIRRAHAVHPITAVQMEYSLWTRE-IEDDIIPLCRELGIGIVAYSP 118 (248)
Q Consensus 50 ~~~l~~l~~~G~ir-~iGvS~~~~~~l~~~~~~~~~~~~q~~~~~~~~~-~~~~~~~~~~~~gi~v~~~~~ 118 (248)
++.+.+++++-.|- ..|=|-++...++++++....+++|+..+..-.- ....+..+|+.+|+.+..+++
T Consensus 268 ~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~ga~d~v~~k~~~~GGit~~~~ia~~A~~~gi~v~~h~~ 338 (426)
T 4e4f_A 268 QACFRLIRQHTVTPIAVGEVFNSIWDCKQLIEEQLIDYIRTTITHAGGITGMRRIADFASLYQVRTGSHGP 338 (426)
T ss_dssp GGGGHHHHTTCCSCEEECTTCCSGGGTHHHHHTTCCSEECCCTTTTTHHHHHHHHHHHHHTTTCEEEECCC
T ss_pred HHHHHHHHhcCCCCEEeCCCcCCHHHHHHHHHcCCCCEEEeCccccCCHHHHHHHHHHHHHcCCEEeeeCC
Confidence 33444555543332 3344556677777777777788888776653221 125688999999999887764
No 224
>2cpg_A REPA protein, transcriptional repressor COPG; DNA-binding protein, plasmid, gene regulation; 1.60A {Streptococcus agalactiae} SCOP: a.43.1.3 PDB: 1b01_A* 1ea4_A*
Probab=24.28 E-value=96 Score=16.93 Aligned_cols=22 Identities=18% Similarity=0.304 Sum_probs=17.1
Q ss_pred HHHHHHHHHHHHhCCCHHHHHH
Q 025789 155 LLYTRLETLAAKYGCTTPQLAL 176 (248)
Q Consensus 155 ~~~~~l~~ia~~~~~s~~q~al 176 (248)
...+.+.++|++.|+|.+++.-
T Consensus 12 ~l~~~Ld~~a~~~g~srS~~ir 33 (45)
T 2cpg_A 12 SVLENLEKMAREMGLSKSAMIS 33 (45)
T ss_dssp HHHHHHHHHHHHHTCCHHHHHH
T ss_pred HHHHHHHHHHHHHCcCHHHHHH
Confidence 3456899999999999876543
No 225
>3mzn_A Glucarate dehydratase; lyase, structural genomics, protein structure initiative, PS nysgrc; 1.85A {Chromohalobacter salexigens} PDB: 3nfu_A
Probab=24.10 E-value=44 Score=29.35 Aligned_cols=71 Identities=11% Similarity=0.164 Sum_probs=44.9
Q ss_pred HHHHHHHHHcCcc-cEEeccCCcHHHHHHHhccCCcceeccccCCccccchhchHHHHHHcCCcEEeecccc
Q 025789 50 MGELKKLVEEGKI-KYIGLSEASADTIRRAHAVHPITAVQMEYSLWTREIEDDIIPLCRELGIGIVAYSPLG 120 (248)
Q Consensus 50 ~~~l~~l~~~G~i-r~iGvS~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~gi~v~~~~~l~ 120 (248)
++.+.++++.-.| -..|-+.++...+..+++...++++|.....---.....+...|+.+|+.+..++...
T Consensus 270 ~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~di~~~d~~~GGit~a~kia~lA~a~gv~~~~h~~~~ 341 (450)
T 3mzn_A 270 RETMAEFKKRTGLPTATNMIATDYKQLQYAVQLNSVDIPLADCHFWTMQGAVAVGELCNEWGMTWGSHSNNH 341 (450)
T ss_dssp HHHHHHHHHHHCCCEEESSSSSSHHHHHHHHHHTCCSEEBCCHHHHCHHHHHHHHHHHHHTTCCCBCCCCSC
T ss_pred HHHHHHHHHhcCCCEEeCCccCCHHHHHHHHHcCCCCEEEecCccCCHHHHHHHHHHHHHcCCEEEecCCcc
Confidence 4455555554333 3556677778888888887777888765321000112668899999999987665543
No 226
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=24.04 E-value=1.8e+02 Score=22.45 Aligned_cols=99 Identities=21% Similarity=0.303 Sum_probs=52.4
Q ss_pred HHHHHHHHcCcccEEecc----------CCcHHHHHHHhccCCcc--eeccccCCccccc---------hhchHHHHHHc
Q 025789 51 GELKKLVEEGKIKYIGLS----------EASADTIRRAHAVHPIT--AVQMEYSLWTREI---------EDDIIPLCREL 109 (248)
Q Consensus 51 ~~l~~l~~~G~ir~iGvS----------~~~~~~l~~~~~~~~~~--~~q~~~~~~~~~~---------~~~~~~~~~~~ 109 (248)
+.++.+++.| +..|-+. ....+.+.++++...+. ++...+++..... -...++.|++.
T Consensus 18 ~~l~~~~~~G-~~~vEl~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~l 96 (278)
T 1i60_A 18 LDLELCEKHG-YDYIEIRTMDKLPEYLKDHSLDDLAEYFQTHHIKPLALNALVFFNNRDEKGHNEIITEFKGMMETCKTL 96 (278)
T ss_dssp HHHHHHHHTT-CSEEEEETTTHHHHHTTSSCHHHHHHHHHTSSCEEEEEEEEECCSSCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhC-CCEEEEccHHHHHHHhccCCHHHHHHHHHHcCCCeeeeccccccccCCHHHHHHHHHHHHHHHHHHHHc
Confidence 3344455556 3444444 23455666666654433 3444555442111 15677888888
Q ss_pred CCcEEeeccccccccccccccCCCCchhhhhcCCCCC-chhhHHHHHHHHHHHHHHHHhCCC
Q 025789 110 GIGIVAYSPLGRGFFAGKAVVESLPSESILAMHPRFS-GENLEKNKLLYTRLETLAAKYGCT 170 (248)
Q Consensus 110 gi~v~~~~~l~~G~l~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~ia~~~~~s 170 (248)
|...+...| |.-. ..+. ....+...+.+..+.++|+++|+.
T Consensus 97 G~~~v~~~~---g~~~-----------------~~~~~~~~~~~~~~~l~~l~~~a~~~gv~ 138 (278)
T 1i60_A 97 GVKYVVAVP---LVTE-----------------QKIVKEEIKKSSVDVLTELSDIAEPYGVK 138 (278)
T ss_dssp TCCEEEEEC---CBCS-----------------SCCCHHHHHHHHHHHHHHHHHHHGGGTCE
T ss_pred CCCEEEEec---CCCC-----------------CCCCHHHHHHHHHHHHHHHHHHHHhcCCE
Confidence 888877532 1100 0122 344455666667777777777764
No 227
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=23.94 E-value=1.8e+02 Score=20.09 Aligned_cols=67 Identities=12% Similarity=0.054 Sum_probs=32.1
Q ss_pred HHhHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHc---CcccEEeccCC-cHHHHHHHhccCCcceeccccC
Q 025789 23 SLKRLDVDYIDLYYQHRVDTSVSIEDTMGELKKLVEE---GKIKYIGLSEA-SADTIRRAHAVHPITAVQMEYS 92 (248)
Q Consensus 23 SL~rL~~d~iDl~~lH~~~~~~~~~~~~~~l~~l~~~---G~ir~iGvS~~-~~~~l~~~~~~~~~~~~q~~~~ 92 (248)
.++.+....+|++++-..-+... .++.++.+++. ..+.-|-++.. +.+...++...+..+++.-+++
T Consensus 43 al~~l~~~~~dlii~D~~l~~~~---g~~~~~~lr~~~~~~~~pii~~s~~~~~~~~~~~~~~g~~~~l~KP~~ 113 (154)
T 3gt7_A 43 AVRFLSLTRPDLIISDVLMPEMD---GYALCRWLKGQPDLRTIPVILLTILSDPRDVVRSLECGADDFITKPCK 113 (154)
T ss_dssp HHHHHTTCCCSEEEEESCCSSSC---HHHHHHHHHHSTTTTTSCEEEEECCCSHHHHHHHHHHCCSEEEESSCC
T ss_pred HHHHHHhCCCCEEEEeCCCCCCC---HHHHHHHHHhCCCcCCCCEEEEECCCChHHHHHHHHCCCCEEEeCCCC
Confidence 33444444567766654333322 34444455554 34555666554 3444455555444444444443
No 228
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=23.87 E-value=1.2e+02 Score=25.47 Aligned_cols=23 Identities=35% Similarity=0.527 Sum_probs=13.4
Q ss_pred CHHHHHHHHHHHHHcCcccEEecc
Q 025789 45 SIEDTMGELKKLVEEGKIKYIGLS 68 (248)
Q Consensus 45 ~~~~~~~~l~~l~~~G~ir~iGvS 68 (248)
..++..+..+.|.+.| +-+|-+|
T Consensus 237 ~~~~~~~la~~L~~~G-vd~i~vs 259 (349)
T 3hgj_A 237 SLEDTLAFARRLKELG-VDLLDCS 259 (349)
T ss_dssp CHHHHHHHHHHHHHTT-CCEEEEE
T ss_pred CHHHHHHHHHHHHHcC-CCEEEEe
Confidence 4555566666666665 5566555
No 229
>1jbe_A Chemotaxis protein CHEY; signaling protein; 1.08A {Escherichia coli} SCOP: c.23.1.1 PDB: 3chy_A 1a0o_A 1cey_A 1bdj_A 1eay_A 1f4v_A 1ffg_A 1ffs_A 1ffw_A 1fqw_A 2b1j_A 1chn_A 1djm_A 1kmi_Y* 1d4z_A 3olx_A 3olw_A 1cye_A 2che_A 2chf_A ...
Probab=23.80 E-value=1.6e+02 Score=19.35 Aligned_cols=9 Identities=0% Similarity=-0.197 Sum_probs=4.2
Q ss_pred cccEEEecc
Q 025789 31 YIDLYYQHR 39 (248)
Q Consensus 31 ~iDl~~lH~ 39 (248)
.+|++++-.
T Consensus 49 ~~dlvi~D~ 57 (128)
T 1jbe_A 49 GYGFVISDW 57 (128)
T ss_dssp CCCEEEEES
T ss_pred CCCEEEEeC
Confidence 345555443
No 230
>3l23_A Sugar phosphate isomerase/epimerase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=23.71 E-value=2.8e+02 Score=22.16 Aligned_cols=49 Identities=6% Similarity=0.009 Sum_probs=32.4
Q ss_pred hchHHHHHHcCCcEEeeccccccccccccccCCCCchhhhhcCCCCCchhhHHHHHHHHHHHHHHHHhCCC
Q 025789 100 DDIIPLCRELGIGIVAYSPLGRGFFAGKAVVESLPSESILAMHPRFSGENLEKNKLLYTRLETLAAKYGCT 170 (248)
Q Consensus 100 ~~~~~~~~~~gi~v~~~~~l~~G~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ia~~~~~s 170 (248)
...++.|++.|+..+....... ......+....+.+..+.+.|+++|++
T Consensus 111 ~~~i~~A~~lG~~~v~~~~~~~----------------------~~~~~~~~~~~~~l~~l~~~a~~~Gv~ 159 (303)
T 3l23_A 111 KATAADHAKLGCKYLIQPMMPT----------------------ITTHDEAKLVCDIFNQASDVIKAEGIA 159 (303)
T ss_dssp HHHHHHHHHTTCSEEEECSCCC----------------------CCSHHHHHHHHHHHHHHHHHHHHTTCT
T ss_pred HHHHHHHHHcCCCEEEECCCCC----------------------CCCHHHHHHHHHHHHHHHHHHHHCCCc
Confidence 5678999999999886521100 011233455667778888888898887
No 231
>3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus}
Probab=23.71 E-value=86 Score=21.00 Aligned_cols=39 Identities=13% Similarity=-0.021 Sum_probs=18.2
Q ss_pred CcccEEEeccCCCCCCHHHHHHHHHHHHHc---CcccEEeccCCc
Q 025789 30 DYIDLYYQHRVDTSVSIEDTMGELKKLVEE---GKIKYIGLSEAS 71 (248)
Q Consensus 30 d~iDl~~lH~~~~~~~~~~~~~~l~~l~~~---G~ir~iGvS~~~ 71 (248)
..+|++++-..-+... .++.++.+++. ..+.-|-+|...
T Consensus 46 ~~~dlvi~d~~l~~~~---g~~~~~~l~~~~~~~~~pii~~s~~~ 87 (133)
T 3nhm_A 46 HPPDVLISDVNMDGMD---GYALCGHFRSEPTLKHIPVIFVSGYA 87 (133)
T ss_dssp SCCSEEEECSSCSSSC---HHHHHHHHHHSTTTTTCCEEEEESCC
T ss_pred CCCCEEEEeCCCCCCC---HHHHHHHHHhCCccCCCCEEEEeCCC
Confidence 3466666654333222 33444444443 245555555543
No 232
>3j21_Z 50S ribosomal protein L30E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=23.62 E-value=1.7e+02 Score=19.45 Aligned_cols=61 Identities=23% Similarity=0.287 Sum_probs=35.5
Q ss_pred HHHHHHHHHHcCcccEEeccCCcHHHHHHHhccCCcceeccccCCccccchhchHHHHHHcCCcEEee
Q 025789 49 TMGELKKLVEEGKIKYIGLSEASADTIRRAHAVHPITAVQMEYSLWTREIEDDIIPLCRELGIGIVAY 116 (248)
Q Consensus 49 ~~~~l~~l~~~G~ir~iGvS~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~gi~v~~~ 116 (248)
+...|...++.|++. .|. .+..++++......+-+--+ ........+..+|++++|+++.|
T Consensus 3 i~~~L~la~kagk~v-~G~-----~~v~kai~~gka~lViiA~D-~~~~~~~~i~~~c~~~~ip~~~~ 63 (99)
T 3j21_Z 3 LAFELRKAMETGKVV-LGS-----NETIRLAKTGGAKLIIVAKN-APKEIKDDIYYYAKLSDIPVYEF 63 (99)
T ss_dssp HHHHHHHHHHSSCEE-ESH-----HHHHHHHHHTCCSEEEEECC-CCHHHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHhCCEe-ECH-----HHHHHHHHcCCccEEEEeCC-CCHHHHHHHHHHHHHcCCCEEEe
Confidence 456677777777743 233 56666666544333322222 11222266788999999998766
No 233
>3pfr_A Mandelate racemase/muconate lactonizing protein; emolase superfamily fold, D-glucarate dehydratase, D-glucara isomerase; HET: GKR; 1.90A {Actinobacillus succinogenes} PDB: 3n6j_A 3n6h_A* 4gyp_C*
Probab=23.58 E-value=49 Score=29.06 Aligned_cols=70 Identities=13% Similarity=0.151 Sum_probs=45.5
Q ss_pred HHHHHHHHHcCcc-cEEeccCCcHHHHHHHhccCCcceeccccCCccccchhchHHHHHHcCCcEEeeccc
Q 025789 50 MGELKKLVEEGKI-KYIGLSEASADTIRRAHAVHPITAVQMEYSLWTREIEDDIIPLCRELGIGIVAYSPL 119 (248)
Q Consensus 50 ~~~l~~l~~~G~i-r~iGvS~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~gi~v~~~~~l 119 (248)
++.+.++++.-.| -..|-+.++...+..+++...++++|.....---.....+..+|+.+|+.+..++..
T Consensus 273 ~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~di~~~d~~~GGit~a~kia~lA~a~gv~~~~h~~~ 343 (455)
T 3pfr_A 273 REIMAEFRRRTGIPTATNMIATNWREMCHAIMLQSVDIPLADPHFWTLTGASRVAQLCNEWGLTWGCHSNN 343 (455)
T ss_dssp HHHHHHHHHHHCCCEEESSSCCSHHHHHHHHHHTCCSEEBCCHHHHCHHHHHHHHHHHHHTTCCCBCCCCS
T ss_pred HHHHHHHHhcCCCCEEeCCCcCCHHHHHHHHHcCCCCEEEecCCcCCHHHHHHHHHHHHHcCCEEEecCCc
Confidence 4556666654333 455667778888888888777888876532100011267889999999997666554
No 234
>4h83_A Mandelate racemase/muconate lactonizing enzyme; structural genomics, enzyme function initiative; 2.09A {Marine actinobacterium PHSC20C1} PDB: 3no1_A 3msy_A
Probab=23.55 E-value=77 Score=27.04 Aligned_cols=81 Identities=10% Similarity=0.070 Sum_probs=54.4
Q ss_pred cEEEeccCCCCCCHHHHHHHHHHHHHcCcc-cEEeccCCcHHHHHHHhccCCcceeccccCCcccc-chhchHHHHHHcC
Q 025789 33 DLYYQHRVDTSVSIEDTMGELKKLVEEGKI-KYIGLSEASADTIRRAHAVHPITAVQMEYSLWTRE-IEDDIIPLCRELG 110 (248)
Q Consensus 33 Dl~~lH~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvS~~~~~~l~~~~~~~~~~~~q~~~~~~~~~-~~~~~~~~~~~~g 110 (248)
++.++-.|-. ..+.++.+.++++...| -..|=|.++...+.++++...++++|+...-.-.- ....+...|+.+|
T Consensus 236 ~~~~iEeP~~---~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~a~d~i~~d~~~~GGit~~~kia~~A~~~g 312 (388)
T 4h83_A 236 NIRWFEEPVE---WHNDKRSMRDVRYQGSVPVCAGQTEFSASGCRDLMETGAIDVCNFDSSWSGGPTAWLRTAAIATSYD 312 (388)
T ss_dssp CCCCEESCBC---STTHHHHHHHHHHHSSSCEEECTTCSSHHHHHHHHHHTCCSEECCCGGGTTCHHHHHHHHHHHHHTT
T ss_pred CcceeecCcc---cccchHHHHHHHhhcCCCccCCccccChHhHHHHHHcCCCCeEeecceeCCCHHHHHHHHHHHHHCC
Confidence 4444544422 12345677777777665 45677888999999999888889998876543211 1256788999999
Q ss_pred CcEEee
Q 025789 111 IGIVAY 116 (248)
Q Consensus 111 i~v~~~ 116 (248)
+.+..+
T Consensus 313 v~v~~h 318 (388)
T 4h83_A 313 VQMGHH 318 (388)
T ss_dssp CEECCC
T ss_pred CEEEec
Confidence 976443
No 235
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=23.23 E-value=3.5e+02 Score=23.70 Aligned_cols=50 Identities=12% Similarity=0.091 Sum_probs=32.3
Q ss_pred cccEEEeccCCCCCCHHHHHHHHHHHHHcCcccEEeccCCcHHHHHHHhc
Q 025789 31 YIDLYYQHRVDTSVSIEDTMGELKKLVEEGKIKYIGLSEASADTIRRAHA 80 (248)
Q Consensus 31 ~iDl~~lH~~~~~~~~~~~~~~l~~l~~~G~ir~iGvS~~~~~~l~~~~~ 80 (248)
-.|+++.--|.......++++.++...+.|.|-..-.|+.++..+.+...
T Consensus 130 ~aDlVIeAVpe~~~vk~~v~~~l~~~~~~~aIlasnTSsl~i~~ia~~~~ 179 (460)
T 3k6j_A 130 NCDLIVESVIEDMKLKKELFANLENICKSTCIFGTNTSSLDLNEISSVLR 179 (460)
T ss_dssp TCSEEEECCCSCHHHHHHHHHHHHTTSCTTCEEEECCSSSCHHHHHTTSS
T ss_pred cCCEEEEcCCCCHHHHHHHHHHHHhhCCCCCEEEecCCChhHHHHHHhcc
Confidence 35666665554322245677777777778887766667777877766554
No 236
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=23.07 E-value=1.7e+02 Score=24.46 Aligned_cols=39 Identities=10% Similarity=-0.117 Sum_probs=22.0
Q ss_pred HHHHHHHHcCcccEEeccCC-cHHHHHHHhccCCcceecc
Q 025789 51 GELKKLVEEGKIKYIGLSEA-SADTIRRAHAVHPITAVQM 89 (248)
Q Consensus 51 ~~l~~l~~~G~ir~iGvS~~-~~~~l~~~~~~~~~~~~q~ 89 (248)
+...++++.=.+--|++.+. +++..+++++.+..|.|++
T Consensus 267 ~~~~~ik~~~~iPVi~~GgI~s~e~a~~~L~~G~aD~V~i 306 (340)
T 3gr7_A 267 PFAELIRREADIPTGAVGLITSGWQAEEILQNGRADLVFL 306 (340)
T ss_dssp HHHHHHHHHTTCCEEEESSCCCHHHHHHHHHTTSCSEEEE
T ss_pred HHHHHHHHHcCCcEEeeCCCCCHHHHHHHHHCCCeeEEEe
Confidence 34444444444555666554 5666666666665565555
No 237
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=23.07 E-value=1.7e+02 Score=24.69 Aligned_cols=63 Identities=13% Similarity=-0.005 Sum_probs=37.7
Q ss_pred HHHHHHHhHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCcccEEeccCCcHHHHHHHhccCCcceecc
Q 025789 18 KCCEASLKRLDVDYIDLYYQHRVDTSVSIEDTMGELKKLVEEGKIKYIGLSEASADTIRRAHAVHPITAVQM 89 (248)
Q Consensus 18 ~~~e~SL~rL~~d~iDl~~lH~~~~~~~~~~~~~~l~~l~~~G~ir~iGvS~~~~~~l~~~~~~~~~~~~q~ 89 (248)
..+-+.|+..|+|||++ |...... +. .+.+++.=.+--|+..+++++..+++++....|.|.+
T Consensus 253 ~~la~~l~~~Gvd~i~v---~~~~~~~---~~---~~~ik~~~~iPvi~~Ggit~e~a~~~l~~G~aD~V~i 315 (361)
T 3gka_A 253 GHVARELGRRRIAFLFA---RESFGGD---AI---GQQLKAAFGGPFIVNENFTLDSAQAALDAGQADAVAW 315 (361)
T ss_dssp HHHHHHHHHTTCSEEEE---ECCCSTT---CC---HHHHHHHHCSCEEEESSCCHHHHHHHHHTTSCSEEEE
T ss_pred HHHHHHHHHcCCCEEEE---CCCCCCH---HH---HHHHHHHcCCCEEEeCCCCHHHHHHHHHcCCccEEEE
Confidence 34566677788766654 4433111 12 2333333245667777778888888888877777655
No 238
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=22.99 E-value=1.6e+02 Score=22.82 Aligned_cols=92 Identities=15% Similarity=0.026 Sum_probs=45.3
Q ss_pred HHHhHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCcccEEeccCC---cHHHHHHHhcc---CCcceeccccCCcc
Q 025789 22 ASLKRLDVDYIDLYYQHRVDTSVSIEDTMGELKKLVEEGKIKYIGLSEA---SADTIRRAHAV---HPITAVQMEYSLWT 95 (248)
Q Consensus 22 ~SL~rL~~d~iDl~~lH~~~~~~~~~~~~~~l~~l~~~G~ir~iGvS~~---~~~~l~~~~~~---~~~~~~q~~~~~~~ 95 (248)
+.++++|.++|++...|.+. ....+++-+.-+.+.+.|. ...+++.+ ..+.+++.++. .....+.+. +-.
T Consensus 37 ~~~~~~G~~~vEl~~~~~~~-~~~~~~~~~~~~~l~~~gl-~i~~~~~~~~~~~~~~~~~i~~A~~lGa~~v~~~--p~~ 112 (257)
T 3lmz_A 37 KTLERLDIHYLCIKDFHLPL-NSTDEQIRAFHDKCAAHKV-TGYAVGPIYMKSEEEIDRAFDYAKRVGVKLIVGV--PNY 112 (257)
T ss_dssp HHHHHTTCCEEEECTTTSCT-TCCHHHHHHHHHHHHHTTC-EEEEEEEEEECSHHHHHHHHHHHHHHTCSEEEEE--ECG
T ss_pred HHHHHhCCCEEEEecccCCC-CCCHHHHHHHHHHHHHcCC-eEEEEeccccCCHHHHHHHHHHHHHhCCCEEEec--CCH
Confidence 34678999999998777532 2233333344444555565 33333322 34444444332 111122221 111
Q ss_pred ccchhchHHHHHHcCCcEEeeccc
Q 025789 96 REIEDDIIPLCRELGIGIVAYSPL 119 (248)
Q Consensus 96 ~~~~~~~~~~~~~~gi~v~~~~~l 119 (248)
.. -..+.+.|+++||.+ ++.+.
T Consensus 113 ~~-l~~l~~~a~~~gv~l-~lEn~ 134 (257)
T 3lmz_A 113 EL-LPYVDKKVKEYDFHY-AIHLH 134 (257)
T ss_dssp GG-HHHHHHHHHHHTCEE-EEECC
T ss_pred HH-HHHHHHHHHHcCCEE-EEecC
Confidence 11 256777788888764 34444
No 239
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=22.96 E-value=53 Score=28.31 Aligned_cols=72 Identities=14% Similarity=0.200 Sum_probs=39.7
Q ss_pred CCCCCHHHHHHHHHHHHHcCcccEEeccCCcHHHHHHHhccCCcce--ecc-------ccCCcc-----ccchhchHHHH
Q 025789 41 DTSVSIEDTMGELKKLVEEGKIKYIGLSEASADTIRRAHAVHPITA--VQM-------EYSLWT-----REIEDDIIPLC 106 (248)
Q Consensus 41 ~~~~~~~~~~~~l~~l~~~G~ir~iGvS~~~~~~l~~~~~~~~~~~--~q~-------~~~~~~-----~~~~~~~~~~~ 106 (248)
+....++.+.+..+.+++.| ...+=+-.|.++.+. .+.+ .|. .|.++. ......+.++|
T Consensus 38 NH~Gsle~A~~li~~Ak~aG-AdavKfQ~~k~~tl~------s~~~~~fq~~~~~~~~~ye~~~~~~l~~e~~~~L~~~~ 110 (385)
T 1vli_A 38 NHDGKLDQAFALIDAAAEAG-ADAVKFQMFQADRMY------QKDPGLYKTAAGKDVSIFSLVQSMEMPAEWILPLLDYC 110 (385)
T ss_dssp TTTTCHHHHHHHHHHHHHHT-CSEEEECCBCGGGGT------SCCC---------CCCHHHHGGGBSSCGGGHHHHHHHH
T ss_pred cccccHHHHHHHHHHHHHhC-CCEEeeeeeccCccc------CcchhhhccCCCCCccHHHHHHhcCCCHHHHHHHHHHH
Confidence 44556777888888888877 445555455443320 0111 121 111111 11126789999
Q ss_pred HHcCCcEEeecccc
Q 025789 107 RELGIGIVAYSPLG 120 (248)
Q Consensus 107 ~~~gi~v~~~~~l~ 120 (248)
++.||.+++ +|+.
T Consensus 111 ~~~Gi~~~s-tpfD 123 (385)
T 1vli_A 111 REKQVIFLS-TVCD 123 (385)
T ss_dssp HHTTCEEEC-BCCS
T ss_pred HHcCCcEEE-ccCC
Confidence 999999987 4553
No 240
>2c71_A Glycoside hydrolase, family 11\:clostridium cellulosome enzyme, dockerin type I\:polysaccharide...; acetyl-xylan, esterases, metal-ION; 1.05A {Clostridium thermocellum} SCOP: c.6.2.3 PDB: 2c79_A
Probab=22.75 E-value=1.7e+02 Score=22.39 Aligned_cols=54 Identities=11% Similarity=-0.024 Sum_probs=29.5
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhHcCCCcccEEEeccCCC--CCCHHHHHHHHHHHHHcCc
Q 025789 3 DGVSIGVKGSPEYVRKCCEASLKRLDVDYIDLYYQHRVDT--SVSIEDTMGELKKLVEEGK 61 (248)
Q Consensus 3 ~~~~~~~~~s~~~i~~~~e~SL~rL~~d~iDl~~lH~~~~--~~~~~~~~~~l~~l~~~G~ 61 (248)
+...|....+++.+.+.+. +++.-. +++++|.... ....+.+-..+..++++|.
T Consensus 125 d~~Dw~~~~~~~~i~~~v~---~~~~~g--~IiL~Hd~~~~~~~t~~al~~ii~~l~~~Gy 180 (216)
T 2c71_A 125 TANDWIPSTTAEQRAAAVI---NGVRDG--TIILLHDVQPEPHPTPEALDIIIPTLKSRGY 180 (216)
T ss_dssp CCSTTCTTSCHHHHHHHHH---HHCCTT--BEEEEESCCSSSCCHHHHHHHHHHHHHHTTC
T ss_pred ccccccCCCCHHHHHHHHH---hcCCCC--cEEEEECCCCChHHHHHHHHHHHHHHHHCCC
Confidence 4445554456676665554 344322 6899997532 2223333355667777763
No 241
>4hnl_A Mandelate racemase/muconate lactonizing enzyme; dehydratase, magnesium binding, enzyme function initiative,; 1.48A {Enterococcus gallinarum EG2} PDB: 3s47_A
Probab=22.60 E-value=53 Score=28.39 Aligned_cols=71 Identities=13% Similarity=0.047 Sum_probs=47.3
Q ss_pred HHHHHHHHHcCcc-cEEeccCCcHHHHHHHhccCCcceeccccCCcccc-chhchHHHHHHcCCcEEeecccc
Q 025789 50 MGELKKLVEEGKI-KYIGLSEASADTIRRAHAVHPITAVQMEYSLWTRE-IEDDIIPLCRELGIGIVAYSPLG 120 (248)
Q Consensus 50 ~~~l~~l~~~G~i-r~iGvS~~~~~~l~~~~~~~~~~~~q~~~~~~~~~-~~~~~~~~~~~~gi~v~~~~~l~ 120 (248)
++.+.+++++-.| -..|=+.++...+.++++...++++|+..+-.-.- ....+..+|+++|+.++..+...
T Consensus 261 ~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~a~d~v~~d~~~~GGite~~~ia~~A~~~gi~v~~h~~~~ 333 (421)
T 4hnl_A 261 SHWLTQLRSQSATPIATGELFNNPMEWQELVKNRQIDFMRAHVSQIGGITPALKLAHFCDAMGVRIAWHTPSD 333 (421)
T ss_dssp GGGHHHHHTTCCCCEEECTTCCSGGGTHHHHHTTCCSEECCCGGGGTSHHHHHHHHHHHHHTTCEECCCCCSS
T ss_pred hHHHHHHHhcCCCCeecCcceehhHHHHHHHhcCCceEEEeCCCCCCCHHHHHHHHHHHHHCCCeEEEeCCcc
Confidence 4455555555333 24455667778888888888888888866543211 12568899999999998876654
No 242
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=22.56 E-value=2.9e+02 Score=23.25 Aligned_cols=65 Identities=15% Similarity=0.124 Sum_probs=40.4
Q ss_pred HHHHHHhHcCCCcccEEEeccCC----CCCCHHHHHHHHHHHHHcCcccEEeccCCcHHHHHHHhccCCcceeccc
Q 025789 19 CCEASLKRLDVDYIDLYYQHRVD----TSVSIEDTMGELKKLVEEGKIKYIGLSEASADTIRRAHAVHPITAVQME 90 (248)
Q Consensus 19 ~~e~SL~rL~~d~iDl~~lH~~~----~~~~~~~~~~~l~~l~~~G~ir~iGvS~~~~~~l~~~~~~~~~~~~q~~ 90 (248)
.+-+.|+..|+|||++ |... ...+ ++.+..+++.=.+--|++.+.+++..+++++....|.|++-
T Consensus 254 ~~a~~l~~~G~d~i~v---~~~~~~~~~~~~----~~~~~~i~~~~~iPvi~~Ggi~~~~a~~~l~~g~aD~V~ig 322 (365)
T 2gou_A 254 AAAALLNKHRIVYLHI---AEVDWDDAPDTP----VSFKRALREAYQGVLIYAGRYNAEKAEQAINDGLADMIGFG 322 (365)
T ss_dssp HHHHHHHHTTCSEEEE---ECCBTTBCCCCC----HHHHHHHHHHCCSEEEEESSCCHHHHHHHHHTTSCSEEECC
T ss_pred HHHHHHHHcCCCEEEE---eCCCcCCCCCcc----HHHHHHHHHHCCCcEEEeCCCCHHHHHHHHHCCCcceehhc
Confidence 3556677778766655 3321 1112 23445555555567777777788888888887777777764
No 243
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=22.53 E-value=3.1e+02 Score=22.18 Aligned_cols=71 Identities=11% Similarity=0.067 Sum_probs=48.7
Q ss_pred CCCHHHHHHHHHHHHh-HcCCCcccEEEeccCCCC-CCHHHHHHHHHHHHHcCcccEEeccCCcHHHHHHHhcc
Q 025789 10 KGSPEYVRKCCEASLK-RLDVDYIDLYYQHRVDTS-VSIEDTMGELKKLVEEGKIKYIGLSEASADTIRRAHAV 81 (248)
Q Consensus 10 ~~s~~~i~~~~e~SL~-rL~~d~iDl~~lH~~~~~-~~~~~~~~~l~~l~~~G~ir~iGvS~~~~~~l~~~~~~ 81 (248)
.++.+...+..+-..+ -+++++|-|..+..+... .+..+++++.+.|+++|..-. =+++-++....++.+.
T Consensus 83 ~~ta~eAv~~a~lare~~~~~~~iKlEv~~d~~~llpD~~~tv~aa~~L~~~Gf~Vl-py~~dd~~~akrl~~~ 155 (265)
T 1wv2_A 83 CYDAVEAVRTCRLARELLDGHNLVKLEVLADQKTLFPNVVETLKAAEQLVKDGFDVM-VYTSDDPIIARQLAEI 155 (265)
T ss_dssp CCSHHHHHHHHHHHHTTTTSCCEEEECCBSCTTTCCBCHHHHHHHHHHHHTTTCEEE-EEECSCHHHHHHHHHS
T ss_pred CCCHHHHHHHHHHHHHHcCCCCeEEEEeecCccccCcCHHHHHHHHHHHHHCCCEEE-EEeCCCHHHHHHHHHh
Confidence 4567777777777777 789999888888665543 357899999999999997543 2234445544444443
No 244
>3h87_C Putative uncharacterized protein; toxin antitoxin complex, vapbc complex, RHH motif, structura genomics; 1.49A {Mycobacterium tuberculosis}
Probab=22.50 E-value=1.6e+02 Score=18.81 Aligned_cols=57 Identities=18% Similarity=0.189 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHhCCCCceeecC-CCChHhHHHhhcccCCCCCHHHHH
Q 025789 155 LLYTRLETLAAKYGCTTPQLALAWLLHQGDDIVPIPG-TTKITNLDNNIGSLALKLKEEDLK 215 (248)
Q Consensus 155 ~~~~~l~~ia~~~~~s~~q~al~~~l~~~~v~~~i~G-~~~~~~l~enl~a~~~~Lt~~~~~ 215 (248)
+....|...|+.+|.|..+...+.+-..- .-+| ..+.+.+.-..+.+.--.+++.|+
T Consensus 12 ev~~~L~~rAa~~G~S~~~ylr~~Le~~a----~~~~~~~~~~~l~r~~~~~~dl~D~~~m~ 69 (73)
T 3h87_C 12 DVLASLDAIAARLGLSRTEYIRRRLAQDA----QTARVTVTAADLRRLRGAVAGLGDPELMR 69 (73)
T ss_dssp HHHHHHHHHHHHHTCCHHHHHHHHHHHHH----TSCCCCCCHHHHHHHHHHSGGGGCHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHh----cCCcccccHHHHHHHHHHHcccCCHHHHH
Confidence 34568999999999999987777664421 1234 557777777665544334454443
No 245
>3aam_A Endonuclease IV, endoiv; DNA repair, base excision repair, BER, TIM barrel, endonucle hydrolase, structural genomics, NPPSFA; 1.58A {Thermus thermophilus}
Probab=22.49 E-value=2.7e+02 Score=21.53 Aligned_cols=20 Identities=15% Similarity=0.052 Sum_probs=13.4
Q ss_pred hchHHHHHHcCC-cEEeeccc
Q 025789 100 DDIIPLCRELGI-GIVAYSPL 119 (248)
Q Consensus 100 ~~~~~~~~~~gi-~v~~~~~l 119 (248)
..+.+.++++|+ .+..+.|.
T Consensus 52 ~~~~~~~~~~gl~~~~~h~~~ 72 (270)
T 3aam_A 52 EAFRALREASGGLPAVIHASY 72 (270)
T ss_dssp HHHHHHHHHTTCCCEEEECCT
T ss_pred HHHHHHHHHcCCceEEEecCc
Confidence 456777788888 55555554
No 246
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=22.48 E-value=1.6e+02 Score=24.80 Aligned_cols=22 Identities=14% Similarity=0.460 Sum_probs=11.1
Q ss_pred HHHHHHHHHHHHHcCcccEEecc
Q 025789 46 IEDTMGELKKLVEEGKIKYIGLS 68 (248)
Q Consensus 46 ~~~~~~~l~~l~~~G~ir~iGvS 68 (248)
.++..+..+.|.+.| +-+|-+|
T Consensus 245 ~~~~~~la~~L~~~G-vd~i~vs 266 (363)
T 3l5l_A 245 LEESIELARRFKAGG-LDLLSVS 266 (363)
T ss_dssp HHHHHHHHHHHHHTT-CCEEEEE
T ss_pred HHHHHHHHHHHHHcC-CCEEEEe
Confidence 344555555555555 4455444
No 247
>1li5_A Cysrs, cysteinyl-tRNA synthetase, transfer RNA-Cys; cysteine, E.coli, ligase; 2.30A {Escherichia coli} SCOP: a.27.1.1 c.26.1.1 PDB: 1li7_A 1u0b_B
Probab=22.45 E-value=91 Score=27.39 Aligned_cols=45 Identities=11% Similarity=0.171 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHhHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCcc
Q 025789 14 EYVRKCCEASLKRLDVDYIDLYYQHRVDTSVSIEDTMGELKKLVEEGKI 62 (248)
Q Consensus 14 ~~i~~~~e~SL~rL~~d~iDl~~lH~~~~~~~~~~~~~~l~~l~~~G~i 62 (248)
+...+.+.+.+++||+.+.|.+ +......+++.+.+++|.++|.+
T Consensus 90 ~~~~~~f~~~~~~LgI~~~d~~----~r~t~~~~~~~~~i~~L~~~G~a 134 (461)
T 1li5_A 90 DRMIAEMHKDFDALNILRPDME----PRATHHIAEIIELTEQLIAKGHA 134 (461)
T ss_dssp HHHHHHHHHHHHHTTCCCCSBC----CBGGGCHHHHHHHHHHHHHTTSE
T ss_pred HHHHHHHHHHHHHcCCCCCccc----ccccchHHHHHHHHHHHHHCCCE
Confidence 4566778999999999887753 22223577889999999999986
No 248
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=22.36 E-value=1.7e+02 Score=19.74 Aligned_cols=13 Identities=23% Similarity=0.197 Sum_probs=6.5
Q ss_pred HHHHHHHHHhHcC
Q 025789 16 VRKCCEASLKRLD 28 (248)
Q Consensus 16 i~~~~e~SL~rL~ 28 (248)
+...+...|+..|
T Consensus 16 ~~~~l~~~L~~~g 28 (136)
T 3t6k_A 16 VAEMLELVLRGAG 28 (136)
T ss_dssp HHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHCC
Confidence 4444555555544
No 249
>3cuq_C Vacuolar protein-sorting-associated protein 25; ESCRT, MBV, VPS, nucleus, protein transport, transc transcription regulation, transport, endosome; 2.61A {Homo sapiens} PDB: 2zme_C
Probab=21.88 E-value=1.4e+02 Score=22.65 Aligned_cols=39 Identities=15% Similarity=0.201 Sum_probs=26.3
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHhHcCCCccc----EEEeccC
Q 025789 2 LDGVSIGVKGSPEYVRKCCEASLKRLDVDYID----LYYQHRV 40 (248)
Q Consensus 2 ~~~~~~~~~~s~~~i~~~~e~SL~rL~~d~iD----l~~lH~~ 40 (248)
+.|...+...+++.++.-++.--++=+..++| -++|.|-
T Consensus 60 F~N~~I~R~Ls~e~~~~il~~L~~~g~aew~d~~~~~~~I~Wr 102 (176)
T 3cuq_C 60 FNNVKLQRKLPVESIQIVLEELRKKGNLEWLDKSKSSFLIMWR 102 (176)
T ss_dssp SEETTTTEECCHHHHHHHHHHHHHHTSEEECSSSSSEEEECSS
T ss_pred cCCccccCcCCHHHHHHHHHHHHhcCCceeecCCCCEEEEEeC
Confidence 45667778899999888777777665455554 2455554
No 250
>3tc3_A UV damage endonuclease; TIM-barrel, hydrolase; 1.50A {Sulfolobus acidocaldarius}
Probab=21.87 E-value=1.6e+02 Score=24.39 Aligned_cols=54 Identities=11% Similarity=0.061 Sum_probs=34.6
Q ss_pred hchHHHHHHcCCcEEeeccccccccccccccCCCCchhhhhcCCCCCchhhHHHHHHHHHHHHHHHHhCC
Q 025789 100 DDIIPLCRELGIGIVAYSPLGRGFFAGKAVVESLPSESILAMHPRFSGENLEKNKLLYTRLETLAAKYGC 169 (248)
Q Consensus 100 ~~~~~~~~~~gi~v~~~~~l~~G~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ia~~~~~ 169 (248)
..++.++.++||.++-.|+=.--+.+. |.+.....+...+.+..+.++|+++|+
T Consensus 63 ~~il~~n~~~~I~~yRiSS~l~P~~th----------------p~~~~~~~~~~~~~l~~iG~~a~~~~i 116 (310)
T 3tc3_A 63 KNILEWNLKHEILFFRISSNTIPLASH----------------PKFHVNWKDKLSHILGDIGDFIKENSI 116 (310)
T ss_dssp HHHHHHHHHTTCCEEECCTTSSTTTTS----------------TTCCCCHHHHTHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHcCCEEEEeCcccCCCccc----------------cccccchHHHHHHHHHHHHHHHHHcCc
Confidence 568999999999998766432222221 122222334556667788888888886
No 251
>3cny_A Inositol catabolism protein IOLE; xylose isomerase-like TIM barrel, structural genomics, joint for structural genomics, JCSG; 1.85A {Lactobacillus plantarum WCFS1}
Probab=21.78 E-value=1.3e+02 Score=23.81 Aligned_cols=32 Identities=3% Similarity=0.011 Sum_probs=20.0
Q ss_pred CCcceeccccCCccccchhchHHHHHHcCCcEEee
Q 025789 82 HPITAVQMEYSLWTREIEDDIIPLCRELGIGIVAY 116 (248)
Q Consensus 82 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~gi~v~~~ 116 (248)
..++.+++.. .+. . ..++...++++|+.+.+.
T Consensus 43 ~G~~~vEl~~-~~~-~-~~~~~~~l~~~gl~~~~~ 74 (301)
T 3cny_A 43 AGFQGTEVGG-FFP-G-PEKLNYELKLRNLEIAGQ 74 (301)
T ss_dssp HTCCEECCCT-TCC-C-HHHHHHHHHHTTCEECEE
T ss_pred hCCCEEEecC-CCC-C-HHHHHHHHHHCCCeEEEE
Confidence 3455665542 122 2 256788889999988775
No 252
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=21.61 E-value=2e+02 Score=24.35 Aligned_cols=63 Identities=14% Similarity=0.032 Sum_probs=38.8
Q ss_pred HHHHHHHhHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCcccEEeccCCcHHHHHHHhccCCcceecc
Q 025789 18 KCCEASLKRLDVDYIDLYYQHRVDTSVSIEDTMGELKKLVEEGKIKYIGLSEASADTIRRAHAVHPITAVQM 89 (248)
Q Consensus 18 ~~~e~SL~rL~~d~iDl~~lH~~~~~~~~~~~~~~l~~l~~~G~ir~iGvS~~~~~~l~~~~~~~~~~~~q~ 89 (248)
..+-+.|+..|+|||++ |...... +. .+.+++.=.+--|+...++++..+++++....|.|.+
T Consensus 245 ~~la~~l~~~Gvd~i~v---~~~~~~~---~~---~~~ik~~~~iPvi~~Ggit~e~a~~~l~~g~aD~V~i 307 (362)
T 4ab4_A 245 TYVARELGKRGIAFICS---REREADD---SI---GPLIKEAFGGPYIVNERFDKASANAALASGKADAVAF 307 (362)
T ss_dssp HHHHHHHHHTTCSEEEE---ECCCCTT---CC---HHHHHHHHCSCEEEESSCCHHHHHHHHHTTSCSEEEE
T ss_pred HHHHHHHHHhCCCEEEE---CCCCCCH---HH---HHHHHHHCCCCEEEeCCCCHHHHHHHHHcCCccEEEE
Confidence 44667778888766654 5443111 12 2333333245667777778888888888877777765
No 253
>3fxg_A Rhamnonate dehydratase; structural gemomics, enolase superfamily, NYSGXRC, target 9265J, lyase, structural genomics, PSI-2; 1.90A {Gibberella zeae ph-1} PDB: 2p0i_A
Probab=21.52 E-value=1e+02 Score=27.06 Aligned_cols=69 Identities=10% Similarity=0.024 Sum_probs=51.2
Q ss_pred HHHHHHHHHcC-cc-cEEeccCCcHHHHHHHhccCCcceeccccCCcccc-chhchHHHHHHcCCcEEeecc
Q 025789 50 MGELKKLVEEG-KI-KYIGLSEASADTIRRAHAVHPITAVQMEYSLWTRE-IEDDIIPLCRELGIGIVAYSP 118 (248)
Q Consensus 50 ~~~l~~l~~~G-~i-r~iGvS~~~~~~l~~~~~~~~~~~~q~~~~~~~~~-~~~~~~~~~~~~gi~v~~~~~ 118 (248)
++.+.+++++- .+ -..|=+.++...+..+++...++++|+..+-.-.- ....+..+|+.+|+.++...+
T Consensus 256 ~~~la~L~~~~~~iPIA~gEs~~s~~d~~~li~~~avDiiq~d~~~~GGItea~kIa~lA~a~Gv~v~~H~~ 327 (455)
T 3fxg_A 256 TDGFALIKRAHPTVKFTTGEHEYSRYGFRKLVEGRNLDIIQPDVMWLGGLTELLKVAALAAAYDVPVVPHAS 327 (455)
T ss_dssp GGGHHHHHHHCTTSEEEECTTCCHHHHHHHHHTTCCCSEECCCTTTSSCHHHHHHHHHHHHTTTCCBCCCSC
T ss_pred HHHHHHHHHhCCCCeEECCCccCCHHHHHHHHHcCCCCEEEECccccCCHHHHHHHHHHHHHcCCEEEecch
Confidence 55666776653 23 45688888999999999988899999977654321 126788999999999987654
No 254
>3q9s_A DNA-binding response regulator; DNA binding protein; 2.40A {Deinococcus radiodurans}
Probab=21.52 E-value=1.7e+02 Score=22.68 Aligned_cols=61 Identities=13% Similarity=0.065 Sum_probs=40.7
Q ss_pred CcccEEEeccCCCCCCHHHHHHHHHHHHHcCcccEEeccCCc-HHHHHHHhccCCcceeccccCC
Q 025789 30 DYIDLYYQHRVDTSVSIEDTMGELKKLVEEGKIKYIGLSEAS-ADTIRRAHAVHPITAVQMEYSL 93 (248)
Q Consensus 30 d~iDl~~lH~~~~~~~~~~~~~~l~~l~~~G~ir~iGvS~~~-~~~l~~~~~~~~~~~~q~~~~~ 93 (248)
..+|++++.. ..+..+-++.++.+++...+.-|-+|.+. .+...++++.+..+++.=+++.
T Consensus 80 ~~~DlvllD~---~lp~~~G~~l~~~lr~~~~~~iI~lt~~~~~~~~~~a~~~Ga~~yl~Kp~~~ 141 (249)
T 3q9s_A 80 DHPDLILLDL---GLPDFDGGDVVQRLRKNSALPIIVLTARDTVEEKVRLLGLGADDYLIKPFHP 141 (249)
T ss_dssp SCCSEEEEEC---CSCHHHHHHHHHHHHTTCCCCEEEEESCCSHHHHHHHHHHTCSEEEESSCCH
T ss_pred CCCCEEEEcC---CCCCCCHHHHHHHHHcCCCCCEEEEECCCCHHHHHHHHHCCCcEEEECCCCH
Confidence 4568887754 33455667777788877778888888774 5666677766655665555543
No 255
>1k68_A Phytochrome response regulator RCPA; phosphorylated aspartate, CHEY homologue, homodimer, (beta/alpha)5, signaling protein; HET: PHD; 1.90A {Tolypothrix SP} SCOP: c.23.1.1
Probab=21.45 E-value=1.8e+02 Score=19.20 Aligned_cols=49 Identities=16% Similarity=0.075 Sum_probs=20.6
Q ss_pred CcccEEEeccCCCCCCHHHHHHHHHHHHHcC---cccEEeccCCc-HHHHHHHhcc
Q 025789 30 DYIDLYYQHRVDTSVSIEDTMGELKKLVEEG---KIKYIGLSEAS-ADTIRRAHAV 81 (248)
Q Consensus 30 d~iDl~~lH~~~~~~~~~~~~~~l~~l~~~G---~ir~iGvS~~~-~~~l~~~~~~ 81 (248)
...|++++...-+... .++.++.+++.. .+.-|-+++.. .+...++.+.
T Consensus 54 ~~~dlvi~d~~~~~~~---g~~~~~~l~~~~~~~~~pii~ls~~~~~~~~~~~~~~ 106 (140)
T 1k68_A 54 SRPDLILLXLNLPKKD---GREVLAEIKSDPTLKRIPVVVLSTSINEDDIFHSYDL 106 (140)
T ss_dssp CCCSEEEECSSCSSSC---HHHHHHHHHHSTTGGGSCEEEEESCCCHHHHHHHHHT
T ss_pred CCCcEEEEecCCCccc---HHHHHHHHHcCcccccccEEEEecCCcHHHHHHHHHh
Confidence 3456666654322222 233444444432 34445554442 3333344333
No 256
>1dw9_A Cyanate lyase; cyanate degradation, structural genomics, PSI, protei structure initiative, midwest center for structural genomic; HET: SO4; 1.65A {Escherichia coli} SCOP: a.35.1.4 d.72.1.1 PDB: 1dwk_A* 2ivq_A 2ivb_A 2iu7_A 2iv1_A 2iuo_A 2ivg_A
Probab=21.43 E-value=98 Score=22.98 Aligned_cols=50 Identities=16% Similarity=0.068 Sum_probs=33.5
Q ss_pred HHHHHHHhCCCHHHHHHHHHHhCCCCceeecCCCChHhHHHhhcccCCCCCHHHHHHHHhh
Q 025789 160 LETLAAKYGCTTPQLALAWLLHQGDDIVPIPGTTKITNLDNNIGSLALKLKEEDLKEICKT 220 (248)
Q Consensus 160 l~~ia~~~~~s~~q~al~~~l~~~~v~~~i~G~~~~~~l~enl~a~~~~Lt~~~~~~l~~~ 220 (248)
..+||+..|+|..-++-.+.-++.. +.++.....+.+ .|++++...|...
T Consensus 29 we~IAe~iG~S~v~vtaa~lGQ~~l---------s~e~A~kLa~~L--gL~~e~~~~l~~~ 78 (156)
T 1dw9_A 29 FAEIADGTGLAEAFVTAALLGQQAL---------PADAARLVGAKL--DLDEDSILLLQMI 78 (156)
T ss_dssp HHHHHTTSSSCHHHHHHHHTTSSCC---------CHHHHHHHHHHT--TCCHHHHHHTTSB
T ss_pred HHHHHHHhCcCHHHHHHHHcCCCCC---------CHHHHHHHHHHh--CcCHHHHHHHhcC
Confidence 5567777777776655555555554 667777777665 5889887777533
No 257
>3ktc_A Xylose isomerase; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.54A {Pectobacterium atrosepticum SCRI1043}
Probab=21.31 E-value=2.9e+02 Score=22.39 Aligned_cols=36 Identities=11% Similarity=0.309 Sum_probs=22.8
Q ss_pred CcceeccccCCccccchhchHHHHHHcCCcEEeecc
Q 025789 83 PITAVQMEYSLWTREIEDDIIPLCRELGIGIVAYSP 118 (248)
Q Consensus 83 ~~~~~q~~~~~~~~~~~~~~~~~~~~~gi~v~~~~~ 118 (248)
.++.+++.+.......-.++...++++|+.+.+..|
T Consensus 47 G~~~VEl~~~~~~~~~~~~l~~~l~~~Gl~i~~~~~ 82 (333)
T 3ktc_A 47 ELSYVDLPYPFTPGVTLSEVKDALKDAGLKAIGITP 82 (333)
T ss_dssp SEEEEEEEESCSTTCCHHHHHHHHHHHTCEEEEEEE
T ss_pred CCCEEEecCCCcchhHHHHHHHHHHHcCCeEEEEec
Confidence 556666543221111126788999999999987665
No 258
>3obe_A Sugar phosphate isomerase/epimerase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=21.31 E-value=3.2e+02 Score=21.88 Aligned_cols=49 Identities=14% Similarity=0.278 Sum_probs=32.1
Q ss_pred hchHHHHHHcCCcEEeeccccccccccccccCCCCchhhhhcCCCCCchhhHHHHHHHHHHHHHHHHhCCC
Q 025789 100 DDIIPLCRELGIGIVAYSPLGRGFFAGKAVVESLPSESILAMHPRFSGENLEKNKLLYTRLETLAAKYGCT 170 (248)
Q Consensus 100 ~~~~~~~~~~gi~v~~~~~l~~G~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ia~~~~~s 170 (248)
...++.|++.|+..+.. | |. . . ......+....+.+..+.++|+++|+.
T Consensus 117 ~~~i~~A~~lG~~~v~~-~---~~-~-~----------------~~~~~~~~~~~~~l~~l~~~a~~~Gv~ 165 (305)
T 3obe_A 117 KKATDIHAELGVSCMVQ-P---SL-P-R----------------IENEDDAKVVSEIFNRAGEITKKAGIL 165 (305)
T ss_dssp HHHHHHHHHHTCSEEEE-C---CC-C-C----------------CSSHHHHHHHHHHHHHHHHHHHTTTCE
T ss_pred HHHHHHHHHcCCCEEEe-C---CC-C-C----------------CCCHHHHHHHHHHHHHHHHHHHHcCCE
Confidence 66889999999998885 2 21 0 0 011223455666777888888888875
No 259
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=21.20 E-value=1.2e+02 Score=23.01 Aligned_cols=85 Identities=13% Similarity=0.029 Sum_probs=45.8
Q ss_pred hHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHc--CcccEEeccC-CcHHH-HHHHhccCCcceeccccCCccccchh
Q 025789 25 KRLDVDYIDLYYQHRVDTSVSIEDTMGELKKLVEE--GKIKYIGLSE-ASADT-IRRAHAVHPITAVQMEYSLWTREIED 100 (248)
Q Consensus 25 ~rL~~d~iDl~~lH~~~~~~~~~~~~~~l~~l~~~--G~ir~iGvS~-~~~~~-l~~~~~~~~~~~~q~~~~~~~~~~~~ 100 (248)
+.++ +++|++-+..|.. ...-.+.++++++. +.--++..-. ...+. ++.+.+. ..+.+-+........ -.
T Consensus 20 ~~~~-~~~diie~G~p~~---~~~g~~~i~~ir~~~~~~~i~~~~~~~~~~~~~~~~~~~~-Gad~v~v~~~~~~~~-~~ 93 (211)
T 3f4w_A 20 DKVV-DDVDIIEVGTPFL---IREGVNAIKAIKEKYPHKEVLADAKIMDGGHFESQLLFDA-GADYVTVLGVTDVLT-IQ 93 (211)
T ss_dssp HHHG-GGCSEEEECHHHH---HHHTTHHHHHHHHHCTTSEEEEEEEECSCHHHHHHHHHHT-TCSEEEEETTSCHHH-HH
T ss_pred HHhh-cCccEEEeCcHHH---HhccHHHHHHHHHhCCCCEEEEEEEeccchHHHHHHHHhc-CCCEEEEeCCCChhH-HH
Confidence 4445 6899988876421 23345667777765 3322333322 23444 5555544 334444433322121 15
Q ss_pred chHHHHHHcCCcEEe
Q 025789 101 DIIPLCRELGIGIVA 115 (248)
Q Consensus 101 ~~~~~~~~~gi~v~~ 115 (248)
++++.|+++|+.++.
T Consensus 94 ~~~~~~~~~g~~~~v 108 (211)
T 3f4w_A 94 SCIRAAKEAGKQVVV 108 (211)
T ss_dssp HHHHHHHHHTCEEEE
T ss_pred HHHHHHHHcCCeEEE
Confidence 688899999988764
No 260
>2ox1_A 3-dehydroquinate dehydratase; (beta-alpha)8 barrel, lyase; 2.33A {Archaeoglobus fulgidus}
Probab=21.20 E-value=2.7e+02 Score=21.09 Aligned_cols=25 Identities=20% Similarity=0.094 Sum_probs=14.7
Q ss_pred CCHHHHHHHHHHHHhHcCC-CcccEEE
Q 025789 11 GSPEYVRKCCEASLKRLDV-DYIDLYY 36 (248)
Q Consensus 11 ~s~~~i~~~~e~SL~rL~~-d~iDl~~ 36 (248)
.+.+.-.+-++.. -++|. ||||+=+
T Consensus 55 ~~~~~~~~ll~~~-~~~g~~d~iDvEl 80 (196)
T 2ox1_A 55 GDERERIEKMKRA-FDSLNPDYVDLES 80 (196)
T ss_dssp SCHHHHHHHHHHH-HHHHCCSEEEEET
T ss_pred CCHHHHHHHHHHH-HHhCCCcEEEEEC
Confidence 4555444444444 45777 9999643
No 261
>3cpk_A Uncharacterized protein Q7W7N7_borpa; BPP2477, BER31, NESG, structural genomics, PSI-2, protein structure initiative; 2.50A {Bordetella parapertussis 12822} PDB: 2k2e_A
Probab=21.15 E-value=1.5e+02 Score=21.74 Aligned_cols=38 Identities=8% Similarity=0.103 Sum_probs=26.5
Q ss_pred CcceeccccCCccccchhchHHHHHHcCCcEEeecccc
Q 025789 83 PITAVQMEYSLWTREIEDDIIPLCRELGIGIVAYSPLG 120 (248)
Q Consensus 83 ~~~~~q~~~~~~~~~~~~~~~~~~~~~gi~v~~~~~l~ 120 (248)
.++++-+--..-.+....++...++++||++-.+..-+
T Consensus 88 ~pEvliiGTG~~~~~l~p~~~~~L~~~GIgvE~M~T~a 125 (150)
T 3cpk_A 88 APEVLLVGTGRRQHLLGPEQVRPLLAMGVGVEAMDTQA 125 (150)
T ss_dssp CCSEEEEECTTSCCCCCHHHHHHHHTTTCEEEEECHHH
T ss_pred CCCEEEEcCCCCCCCCCHHHHHHHHHcCCEEEEeCHHH
Confidence 46666665554444444678999999999999886554
No 262
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=21.08 E-value=2.8e+02 Score=23.69 Aligned_cols=70 Identities=11% Similarity=0.087 Sum_probs=48.2
Q ss_pred HHHHHHHhHcC------CCcccEEEeccCCCC----CC-----HH-HHHHHHHHHHHcCcccEEeccCCcHHHHHHHhcc
Q 025789 18 KCCEASLKRLD------VDYIDLYYQHRVDTS----VS-----IE-DTMGELKKLVEEGKIKYIGLSEASADTIRRAHAV 81 (248)
Q Consensus 18 ~~~e~SL~rL~------~d~iDl~~lH~~~~~----~~-----~~-~~~~~l~~l~~~G~ir~iGvS~~~~~~l~~~~~~ 81 (248)
..+-+.|+..| +|||++ |..... .+ .. .-++....+++.=.+--|++...+++..++++..
T Consensus 263 ~~la~~le~~G~~gg~~vd~i~v---~~~~~~~~~~~~~~~~~~~~~~~~~~~~vk~~~~iPvi~~G~i~~~~a~~~l~~ 339 (402)
T 2hsa_B 263 LAVVERLNKIQLHSGSKLAYLHV---TQPRYVAYGQTEAGRLGSEEEEARLMRTLRNAYQGTFICSGGYTRELGIEAVAQ 339 (402)
T ss_dssp HHHHHHHHHHHHHHTSCCSEEEE---ECCCCCTTTTSSSTTTTHHHHHHHHHHHHHHHCSSCEEEESSCCHHHHHHHHHT
T ss_pred HHHHHHHHhcCCccCCceEEEEE---ecCccccccCCccccccCCcchHHHHHHHHHHCCCCEEEeCCCCHHHHHHHHHC
Confidence 34556777888 666555 543211 11 11 2467777788877778888888899999999998
Q ss_pred CCcceeccc
Q 025789 82 HPITAVQME 90 (248)
Q Consensus 82 ~~~~~~q~~ 90 (248)
...|.|++-
T Consensus 340 g~aD~V~ig 348 (402)
T 2hsa_B 340 GDADLVSYG 348 (402)
T ss_dssp TSCSEEEES
T ss_pred CCCceeeec
Confidence 888888773
No 263
>4dlp_A Aminoacyl-tRNA synthetase, class I:aminoacyl-tRNA synthetase, class IA:methionyl-tRNA...; structural genomics; 2.65A {Brucella melitensis biovar abortus 230ORGANISM_TAXID}
Probab=20.93 E-value=1e+02 Score=27.54 Aligned_cols=46 Identities=15% Similarity=0.198 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHhHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCcc
Q 025789 14 EYVRKCCEASLKRLDVDYIDLYYQHRVDTSVSIEDTMGELKKLVEEGKI 62 (248)
Q Consensus 14 ~~i~~~~e~SL~rL~~d~iDl~~lH~~~~~~~~~~~~~~l~~l~~~G~i 62 (248)
+.+.+.+.+.+++||+++ |.+. +.......+.+.+.+++|+++|.|
T Consensus 94 ~~~~~~~~~~l~~lgi~~-d~~~--~t~~~~~~~~v~~~~~~L~~~G~i 139 (536)
T 4dlp_A 94 DRNTSAFRRMAEVLNSSN-DDYI--RTSEERHYKASQAIWQAMVANGDI 139 (536)
T ss_dssp HHHHHHHHHHHHHTTCCC-SEEE--ETTSHHHHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHHHHHHHcCCCC-Ccce--eCCCHHHHHHHHHHHHHHHHCCCE
Confidence 456778899999999985 6442 111112346788999999999998
No 264
>2lv7_A Calcium-binding protein 7; metal binding protein; NMR {Homo sapiens}
Probab=20.86 E-value=45 Score=22.29 Aligned_cols=33 Identities=21% Similarity=0.283 Sum_probs=26.6
Q ss_pred CCCChHhHHHhhcccCCCCCHHHHHHHHhhcCC
Q 025789 191 GTTKITNLDNNIGSLALKLKEEDLKEICKTIPV 223 (248)
Q Consensus 191 G~~~~~~l~enl~a~~~~Lt~~~~~~l~~~~~~ 223 (248)
|.=+.+++...+..++..+|++++++|-+..+.
T Consensus 51 G~I~~~El~~~l~~lg~~~~~~ei~~l~~~~D~ 83 (100)
T 2lv7_A 51 GFISKQELGTAMRSLGYMPNEVELEVIIQRLDM 83 (100)
T ss_dssp SCBCHHHHHHHHHHHTCCCCTTTHHHHHHHHCS
T ss_pred CcCCHHHHHHHHHHhCCCCCHHHHHHHHHHHCC
Confidence 555889999999998889999988888666554
No 265
>3cnb_A DNA-binding response regulator, MERR family; signal receiver domain, DNA binding protein, protein structu initiative, PSI-2; 2.00A {Colwellia psychrerythraea}
Probab=20.85 E-value=1.7e+02 Score=19.54 Aligned_cols=11 Identities=9% Similarity=0.002 Sum_probs=5.2
Q ss_pred HHHHHHHHHhH
Q 025789 16 VRKCCEASLKR 26 (248)
Q Consensus 16 i~~~~e~SL~r 26 (248)
+...+...|+.
T Consensus 20 ~~~~l~~~L~~ 30 (143)
T 3cnb_A 20 FADMLTQFLEN 30 (143)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 34444455554
No 266
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=20.62 E-value=65 Score=27.32 Aligned_cols=81 Identities=10% Similarity=0.111 Sum_probs=42.3
Q ss_pred EEEeccC--CCCCCHHHHHHHHHHHHHcCcccEEeccCCcHHHHHHHhccCCcceeccc------cCCc-----cccchh
Q 025789 34 LYYQHRV--DTSVSIEDTMGELKKLVEEGKIKYIGLSEASADTIRRAHAVHPITAVQME------YSLW-----TREIED 100 (248)
Q Consensus 34 l~~lH~~--~~~~~~~~~~~~l~~l~~~G~ir~iGvS~~~~~~l~~~~~~~~~~~~q~~------~~~~-----~~~~~~ 100 (248)
.+.|-.+ +.....+.+.+..+.+++.|- ..+=+-.|.++.+..-.. . ..|.. |.++ ......
T Consensus 20 ~~iIAe~g~NH~gs~e~a~~li~~ak~aGa-davKfq~~k~~tl~s~~~-~---~fq~~~~~~~~y~~~~~~~l~~e~~~ 94 (349)
T 2wqp_A 20 PLIICEIGINHEGSLKTAFEMVDAAYNAGA-EVVKHQTHIVEDEMSDEA-K---QVIPGNADVSIYEIMERCALNEEDEI 94 (349)
T ss_dssp CEEEEEEETTTTTCHHHHHHHHHHHHHHTC-SEEEEEECCHHHHCCGGG-G---GCCCTTCSSCHHHHHHHHCCCHHHHH
T ss_pred eEEEEecCCcccCCHHHHHHHHHHHHHhCC-CEEeeeecccccccCcch-h---ccccCCCCccHHHHHHHhCCCHHHHH
Confidence 4555533 334567777777777777664 344444565554311000 0 01211 1111 111126
Q ss_pred chHHHHHHcCCcEEeecccc
Q 025789 101 DIIPLCRELGIGIVAYSPLG 120 (248)
Q Consensus 101 ~~~~~~~~~gi~v~~~~~l~ 120 (248)
.+.++|++.||.+++ +|+.
T Consensus 95 ~L~~~~~~~Gi~~~s-t~~d 113 (349)
T 2wqp_A 95 KLKEYVESKGMIFIS-TLFS 113 (349)
T ss_dssp HHHHHHHHTTCEEEE-EECS
T ss_pred HHHHHHHHhCCeEEE-eeCC
Confidence 788999999999987 4443
No 267
>3c8z_A Cysteinyl-tRNA synthetase; cysteine ligase, rossmann fold, Cys-SA inhibitor, zinc binding, ATP-binding, aminoacyl-tRNA synthetase; HET: 5CA 1PE EPE; 1.60A {Mycobacterium smegmatis}
Probab=20.60 E-value=2.1e+02 Score=24.56 Aligned_cols=46 Identities=15% Similarity=0.141 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHhHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCccc
Q 025789 14 EYVRKCCEASLKRLDVDYIDLYYQHRVDTSVSIEDTMGELKKLVEEGKIK 63 (248)
Q Consensus 14 ~~i~~~~e~SL~rL~~d~iDl~~lH~~~~~~~~~~~~~~l~~l~~~G~ir 63 (248)
+...+.+.+.+++||+...|.+.--. ...+.+.+.+++|.++|.+-
T Consensus 107 ~~~~~~~~~~~~~Lgi~~~d~~~r~t----~~~~~~~~~~~~L~~kG~~Y 152 (414)
T 3c8z_A 107 DRETQLFREDMAALRVLPPHDYVAAT----DAIAEVVEMVEKLLASGAAY 152 (414)
T ss_dssp HHHHHHHHHHHHHTTCCCCSEEEEGG----GCHHHHHHHHHHHHHHTSEE
T ss_pred HHHHHHHHHHHHHcCCCCCcceeccc----chHHHHHHHHHHHHHCCCEE
Confidence 56677889999999998678654321 24567889999999999983
No 268
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=20.47 E-value=83 Score=26.80 Aligned_cols=70 Identities=14% Similarity=0.063 Sum_probs=39.7
Q ss_pred HHHHHHHhHcCCCcccEEEeccCCCCC--CHHHHHHHHHHHHHcCcccEEeccCCcHHHHHHHhccCCcceeccc
Q 025789 18 KCCEASLKRLDVDYIDLYYQHRVDTSV--SIEDTMGELKKLVEEGKIKYIGLSEASADTIRRAHAVHPITAVQME 90 (248)
Q Consensus 18 ~~~e~SL~rL~~d~iDl~~lH~~~~~~--~~~~~~~~l~~l~~~G~ir~iGvS~~~~~~l~~~~~~~~~~~~q~~ 90 (248)
..+-+.|+..|+|||++ |...... +....++.+.++++.=.+--|+....+++..++++.....|.|++-
T Consensus 259 ~~la~~le~~Gvd~i~v---~~~~~~~~~~~~~~~~~~~~vr~~~~iPvi~~G~i~~~~a~~~l~~g~aD~V~~g 330 (376)
T 1icp_A 259 LYMVESLNKYDLAYCHV---VEPRMKTAWEKIECTESLVPMRKAYKGTFIVAGGYDREDGNRALIEDRADLVAYG 330 (376)
T ss_dssp HHHHHHHGGGCCSEEEE---ECCSCCC------CCCCSHHHHHHCCSCEEEESSCCHHHHHHHHHTTSCSEEEES
T ss_pred HHHHHHHHHcCCCEEEE---cCCcccCCCCccccHHHHHHHHHHcCCCEEEeCCCCHHHHHHHHHCCCCcEEeec
Confidence 34556777778666554 4321110 1001223344555554566677777778888888887777777663
No 269
>3apt_A Methylenetetrahydrofolate reductase; TIM barrel, oxidoreductase, flavin; HET: FAD; 1.85A {Thermus thermophilus} PDB: 3apy_A* 1v93_A*
Probab=20.42 E-value=3.6e+02 Score=22.10 Aligned_cols=98 Identities=14% Similarity=0.082 Sum_probs=56.7
Q ss_pred CCCCHHHHHHHHHHHHhHcCCCcccEEEeccCCC-C-C---C----HHHHHHHHHHHHHc-CcccEEeccCCc-------
Q 025789 9 VKGSPEYVRKCCEASLKRLDVDYIDLYYQHRVDT-S-V---S----IEDTMGELKKLVEE-GKIKYIGLSEAS------- 71 (248)
Q Consensus 9 ~~~s~~~i~~~~e~SL~rL~~d~iDl~~lH~~~~-~-~---~----~~~~~~~l~~l~~~-G~ir~iGvS~~~------- 71 (248)
.+.+++.+...+.. +..+|++. ++.|-...+ . . + +..+.+.++.+++. |.=-.||++.++
T Consensus 81 ~~~~~~~l~~~L~~-~~~~GI~n--iLaLrGD~p~~~g~~~~~~~~f~~a~~Lv~~ir~~~g~~f~igvA~yPE~Hp~~~ 157 (310)
T 3apt_A 81 AGQSRKEVAEVLHR-FVESGVEN--LLALRGDPPRGERVFRPHPEGFRYAAELVALIRERYGDRVSVGGAAYPEGHPESE 157 (310)
T ss_dssp TTSCHHHHHHHHHH-HHHTTCCE--EEEECCCCSTTCCSCCCCTTSCSSHHHHHHHHHHHHGGGSEEEEEECTTCCTTSS
T ss_pred CCCCHHHHHHHHHH-HHHCCCCE--EEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHhCCCCeEEEEEeCCCcCCCCC
Confidence 35678888777766 45889874 455543211 1 0 1 22344555555555 742589998763
Q ss_pred -H-HHHHHHhcc----CCcceeccccCCccccchhchHHHHHHcCCc
Q 025789 72 -A-DTIRRAHAV----HPITAVQMEYSLWTREIEDDIIPLCRELGIG 112 (248)
Q Consensus 72 -~-~~l~~~~~~----~~~~~~q~~~~~~~~~~~~~~~~~~~~~gi~ 112 (248)
. .++..+.+. ..+.+.|.-|+.-. -..+++.|++.||.
T Consensus 158 ~~~~d~~~Lk~Kv~aGAdf~iTQ~ffD~~~---~~~f~~~~r~~Gi~ 201 (310)
T 3apt_A 158 SLEADLRHFKAKVEAGLDFAITQLFFNNAH---YFGFLERARRAGIG 201 (310)
T ss_dssp CHHHHHHHHHHHHHHHCSEEEECCCSCHHH---HHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHHHHHcCCCEEEecccCCHHH---HHHHHHHHHHcCCC
Confidence 2 233333222 55667777776511 25688899998865
No 270
>3en0_A Cyanophycinase; serine protease, beta peptide specific, hydrolase, protease; 1.50A {Synechocystis SP}
Probab=20.35 E-value=98 Score=25.41 Aligned_cols=57 Identities=18% Similarity=0.285 Sum_probs=39.9
Q ss_pred CHHHHHHHHHHHHhHcCCCcccEEEeccC---CCC-----------------CC--H------HHHHHHHHHHHHcCccc
Q 025789 12 SPEYVRKCCEASLKRLDVDYIDLYYQHRV---DTS-----------------VS--I------EDTMGELKKLVEEGKIK 63 (248)
Q Consensus 12 s~~~i~~~~e~SL~rL~~d~iDl~~lH~~---~~~-----------------~~--~------~~~~~~l~~l~~~G~ir 63 (248)
.++...+...+.+++||.+.++.+.+... +.. .. + ..+.++|.++.++|++-
T Consensus 68 ~~~~~~~~~~~~f~~lG~~~v~~L~i~~r~~a~~~~~~~~l~~ad~I~v~GGnt~~l~~~l~~t~l~~~L~~~~~~G~~~ 147 (291)
T 3en0_A 68 EPLLIGERYQTIFSDMGVKELKVLDIRDRAQGDDSGYRLFVEQCTGIFMTGGDQLRLCGLLADTPLMDRIRQRVHNGEIS 147 (291)
T ss_dssp SHHHHHHHHHHHHHHHCCSEEEECCCCSGGGGGCHHHHHHHHHCSEEEECCSCHHHHHHHHTTCHHHHHHHHHHHTTSSE
T ss_pred ChHHHHHHHHHHHHHcCCCeeEEEEecCccccCCHHHHHHHhcCCEEEECCCCHHHHHHHHHhCCHHHHHHHHHHCCCeE
Confidence 46677788899999999977777766322 110 00 0 13568888899999888
Q ss_pred EEecc
Q 025789 64 YIGLS 68 (248)
Q Consensus 64 ~iGvS 68 (248)
++|.|
T Consensus 148 ~~GtS 152 (291)
T 3en0_A 148 LAGTS 152 (291)
T ss_dssp EEEET
T ss_pred EEEeC
Confidence 88987
Done!