Query 025793
Match_columns 248
No_of_seqs 229 out of 1225
Neff 4.5
Searched_HMMs 29240
Date Mon Mar 25 17:43:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025793.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025793hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3doc_A Glyceraldehyde 3-phosph 100.0 3.9E-57 1.3E-61 420.4 13.0 155 85-242 1-157 (335)
2 3lvf_P GAPDH 1, glyceraldehyde 100.0 1.6E-56 5.3E-61 416.8 13.9 153 85-242 3-157 (338)
3 4dib_A GAPDH, glyceraldehyde 3 100.0 2E-56 6.9E-61 416.9 12.4 154 85-242 3-158 (345)
4 3pym_A GAPDH 3, glyceraldehyde 100.0 4.5E-56 1.5E-60 412.9 14.1 150 87-242 2-154 (332)
5 3v1y_O PP38, glyceraldehyde-3- 100.0 1.5E-55 5.1E-60 410.1 12.4 152 86-242 3-158 (337)
6 3ids_C GAPDH, glyceraldehyde-3 100.0 1E-55 3.5E-60 414.0 11.1 155 85-243 1-171 (359)
7 3h9e_O Glyceraldehyde-3-phosph 100.0 3.3E-54 1.1E-58 402.2 13.6 151 85-242 6-160 (346)
8 3hja_A GAPDH, glyceraldehyde-3 100.0 2.2E-53 7.5E-58 397.8 10.5 152 85-242 20-178 (356)
9 1obf_O Glyceraldehyde 3-phosph 100.0 1.1E-49 3.8E-54 370.1 13.8 153 87-242 2-158 (335)
10 2b4r_O Glyceraldehyde-3-phosph 100.0 9.7E-50 3.3E-54 371.9 12.2 153 85-242 10-165 (345)
11 2ep7_A GAPDH, glyceraldehyde-3 100.0 2.9E-49 9.8E-54 368.3 10.5 153 85-242 1-156 (342)
12 2d2i_A Glyceraldehyde 3-phosph 100.0 1.6E-45 5.5E-50 347.0 12.7 156 85-242 1-159 (380)
13 2g82_O GAPDH, glyceraldehyde-3 100.0 2.2E-45 7.5E-50 340.1 12.0 151 87-242 1-153 (331)
14 1rm4_O Glyceraldehyde 3-phosph 100.0 9.7E-45 3.3E-49 336.6 12.5 155 86-242 1-157 (337)
15 3b1j_A Glyceraldehyde 3-phosph 100.0 2.2E-44 7.4E-49 334.0 14.6 156 85-242 1-159 (339)
16 3cps_A Glyceraldehyde 3-phosph 100.0 2.8E-43 9.7E-48 328.8 12.1 154 85-242 16-172 (354)
17 1gad_O D-glyceraldehyde-3-phos 100.0 4.6E-43 1.6E-47 323.8 11.9 150 87-242 2-153 (330)
18 3cmc_O GAPDH, glyceraldehyde-3 100.0 8.1E-43 2.8E-47 322.9 12.6 152 87-242 2-155 (334)
19 1hdg_O Holo-D-glyceraldehyde-3 100.0 1.9E-42 6.6E-47 320.1 11.3 152 87-242 1-155 (332)
20 3e5r_O PP38, glyceraldehyde-3- 100.0 4.2E-42 1.5E-46 318.0 12.4 153 85-242 2-158 (337)
21 2x5j_O E4PDH, D-erythrose-4-ph 100.0 7.6E-42 2.6E-46 316.7 12.1 153 85-242 1-159 (339)
22 1u8f_O GAPDH, glyceraldehyde-3 100.0 1.3E-41 4.3E-46 313.8 13.0 152 85-242 2-156 (335)
23 2yyy_A Glyceraldehyde-3-phosph 100.0 1.2E-30 4E-35 241.7 -0.5 139 85-242 1-148 (343)
24 2czc_A Glyceraldehyde-3-phosph 99.9 1.4E-23 4.9E-28 191.9 -1.8 139 85-242 1-145 (334)
25 1cf2_P Protein (glyceraldehyde 99.8 2.8E-23 9.7E-28 191.2 -3.7 136 87-242 2-144 (337)
26 1b7g_O Protein (glyceraldehyde 99.8 3.1E-21 1.1E-25 177.8 1.4 127 87-242 2-143 (340)
27 2yv3_A Aspartate-semialdehyde 99.8 8E-19 2.7E-23 161.2 8.7 124 87-242 1-129 (331)
28 2hjs_A USG-1 protein homolog; 99.7 4.4E-18 1.5E-22 156.7 6.6 129 85-242 5-137 (340)
29 2r00_A Aspartate-semialdehyde 99.7 1.1E-17 3.8E-22 153.7 9.0 128 86-242 3-135 (336)
30 1t4b_A Aspartate-semialdehyde 99.7 1.1E-18 3.7E-23 162.8 -5.5 129 87-242 2-139 (367)
31 1xyg_A Putative N-acetyl-gamma 99.6 4.5E-17 1.5E-21 151.0 4.0 128 86-242 16-167 (359)
32 2ep5_A 350AA long hypothetical 99.6 8.5E-17 2.9E-21 148.3 2.3 137 86-242 4-155 (350)
33 2ozp_A N-acetyl-gamma-glutamyl 99.6 2.7E-16 9.4E-21 144.9 4.9 127 86-242 4-153 (345)
34 1ys4_A Aspartate-semialdehyde 99.6 1.8E-16 6.1E-21 145.9 1.6 139 85-242 7-161 (354)
35 2nqt_A N-acetyl-gamma-glutamyl 99.2 3.9E-12 1.3E-16 118.1 0.6 130 86-242 9-162 (352)
36 3pwk_A Aspartate-semialdehyde 99.1 2.1E-10 7.3E-15 107.3 9.6 128 85-242 1-132 (366)
37 3tz6_A Aspartate-semialdehyde 98.9 4.1E-09 1.4E-13 97.8 9.8 127 87-242 2-133 (344)
38 3pzr_A Aspartate-semialdehyde 98.8 2.5E-10 8.7E-15 107.0 -2.4 128 87-242 1-138 (370)
39 3uw3_A Aspartate-semialdehyde 98.7 4.1E-10 1.4E-14 105.8 -3.0 130 85-242 3-142 (377)
40 4dpl_A Malonyl-COA/succinyl-CO 98.7 1E-08 3.4E-13 95.4 5.0 137 85-242 6-157 (359)
41 4dpk_A Malonyl-COA/succinyl-CO 98.7 1E-08 3.4E-13 95.4 5.0 137 85-242 6-157 (359)
42 3dr3_A N-acetyl-gamma-glutamyl 98.6 6.8E-09 2.3E-13 96.0 1.0 129 87-242 5-161 (337)
43 3hsk_A Aspartate-semialdehyde 98.2 2.8E-06 9.6E-11 79.8 8.0 135 85-239 18-171 (381)
44 1f06_A MESO-diaminopimelate D- 97.8 3.2E-05 1.1E-09 69.7 6.4 90 85-210 2-91 (320)
45 3bio_A Oxidoreductase, GFO/IDH 97.2 0.00044 1.5E-08 61.8 6.1 89 86-209 9-97 (304)
46 2dc1_A L-aspartate dehydrogena 97.0 0.00076 2.6E-08 57.5 5.6 32 87-121 1-32 (236)
47 3qy9_A DHPR, dihydrodipicolina 96.9 0.00097 3.3E-08 58.8 5.3 33 86-121 3-35 (243)
48 3ohs_X Trans-1,2-dihydrobenzen 96.8 0.0015 5E-08 58.2 5.5 99 85-210 1-99 (334)
49 3ezy_A Dehydrogenase; structur 96.6 0.0018 6.2E-08 57.8 5.0 97 85-210 1-97 (344)
50 3ijp_A DHPR, dihydrodipicolina 96.6 0.00055 1.9E-08 62.2 1.3 35 85-121 20-55 (288)
51 1p9l_A Dihydrodipicolinate red 96.5 0.0025 8.6E-08 56.2 5.2 74 87-189 1-81 (245)
52 4hkt_A Inositol 2-dehydrogenas 96.5 0.0056 1.9E-07 54.2 7.5 94 85-209 2-95 (331)
53 3cea_A MYO-inositol 2-dehydrog 96.5 0.0031 1.1E-07 55.9 5.5 97 85-210 7-104 (346)
54 1j5p_A Aspartate dehydrogenase 96.4 0.0021 7.2E-08 57.5 4.0 82 85-209 11-92 (253)
55 1dih_A Dihydrodipicolinate red 96.4 0.0056 1.9E-07 54.5 6.4 34 86-121 5-39 (273)
56 3euw_A MYO-inositol dehydrogen 96.3 0.008 2.7E-07 53.5 7.4 96 85-210 3-98 (344)
57 1vkn_A N-acetyl-gamma-glutamyl 96.3 0.0011 3.6E-08 61.8 1.3 123 85-239 12-156 (351)
58 3mz0_A Inositol 2-dehydrogenas 96.2 0.0055 1.9E-07 54.7 5.7 99 85-210 1-99 (344)
59 2ejw_A HDH, homoserine dehydro 96.2 0.011 3.7E-07 54.4 7.7 36 86-121 3-44 (332)
60 3ic5_A Putative saccharopine d 96.2 0.005 1.7E-07 45.1 4.3 98 85-208 4-101 (118)
61 2ho3_A Oxidoreductase, GFO/IDH 96.1 0.011 3.7E-07 52.2 7.0 95 86-210 1-95 (325)
62 3e9m_A Oxidoreductase, GFO/IDH 96.0 0.0068 2.3E-07 53.9 5.2 96 85-209 4-99 (330)
63 3i23_A Oxidoreductase, GFO/IDH 96.0 0.0078 2.7E-07 54.0 5.5 97 85-210 1-98 (349)
64 1nvm_B Acetaldehyde dehydrogen 96.0 0.006 2.1E-07 55.2 4.8 95 85-210 3-106 (312)
65 3kux_A Putative oxidoreductase 96.0 0.012 4.2E-07 52.6 6.7 93 85-209 6-99 (352)
66 3f4l_A Putative oxidoreductase 95.9 0.014 5E-07 52.0 6.9 97 85-210 1-98 (345)
67 3c1a_A Putative oxidoreductase 95.9 0.0084 2.9E-07 52.8 5.3 94 85-210 9-102 (315)
68 3e18_A Oxidoreductase; dehydro 95.8 0.017 5.8E-07 52.2 7.1 94 86-210 5-98 (359)
69 3gdo_A Uncharacterized oxidore 95.8 0.012 4.3E-07 52.9 6.0 93 85-209 4-97 (358)
70 3ec7_A Putative dehydrogenase; 95.7 0.014 4.8E-07 52.7 6.0 98 85-210 22-120 (357)
71 3e82_A Putative oxidoreductase 95.7 0.017 5.8E-07 52.3 6.4 94 85-210 6-100 (364)
72 3db2_A Putative NADPH-dependen 95.7 0.014 4.7E-07 52.3 5.7 96 85-210 4-99 (354)
73 3evn_A Oxidoreductase, GFO/IDH 95.6 0.012 4.1E-07 52.3 5.1 97 85-210 4-100 (329)
74 3mtj_A Homoserine dehydrogenas 95.6 0.0094 3.2E-07 57.0 4.4 36 86-121 10-52 (444)
75 1ydw_A AX110P-like protein; st 95.5 0.014 4.7E-07 52.4 5.3 100 85-210 5-104 (362)
76 3fhl_A Putative oxidoreductase 95.2 0.026 8.8E-07 50.8 5.9 94 85-210 4-98 (362)
77 1h6d_A Precursor form of gluco 95.2 0.03 1E-06 52.1 6.4 101 85-210 82-183 (433)
78 4gqa_A NAD binding oxidoreduct 95.1 0.013 4.5E-07 53.5 3.7 99 85-210 25-129 (412)
79 1tlt_A Putative oxidoreductase 95.1 0.026 8.7E-07 49.7 5.3 91 86-210 5-98 (319)
80 3q2i_A Dehydrogenase; rossmann 95.0 0.023 8E-07 50.7 4.8 97 85-210 12-108 (354)
81 3uuw_A Putative oxidoreductase 94.9 0.033 1.1E-06 48.7 5.5 93 86-210 6-99 (308)
82 1xea_A Oxidoreductase, GFO/IDH 94.8 0.058 2E-06 47.5 7.0 95 85-210 1-96 (323)
83 2ixa_A Alpha-N-acetylgalactosa 94.7 0.042 1.4E-06 51.1 6.0 103 85-210 19-124 (444)
84 1zh8_A Oxidoreductase; TM0312, 94.6 0.034 1.2E-06 49.7 4.8 98 85-210 17-115 (340)
85 3m2t_A Probable dehydrogenase; 94.6 0.034 1.2E-06 50.2 4.9 96 86-210 5-101 (359)
86 2glx_A 1,5-anhydro-D-fructose 94.5 0.038 1.3E-06 48.5 5.0 94 87-210 1-95 (332)
87 2dt5_A AT-rich DNA-binding pro 94.3 0.063 2.1E-06 46.2 5.7 96 86-211 80-175 (211)
88 3rc1_A Sugar 3-ketoreductase; 94.0 0.043 1.5E-06 49.3 4.4 94 86-209 27-121 (350)
89 4f3y_A DHPR, dihydrodipicolina 93.9 0.061 2.1E-06 48.0 5.0 34 86-121 7-41 (272)
90 3moi_A Probable dehydrogenase; 93.8 0.052 1.8E-06 49.4 4.4 95 85-210 1-97 (387)
91 3keo_A Redox-sensing transcrip 93.1 0.091 3.1E-06 45.6 4.7 96 86-211 84-183 (212)
92 1ebf_A Homoserine dehydrogenas 92.9 0.12 4.2E-06 47.6 5.4 37 85-121 3-40 (358)
93 2p2s_A Putative oxidoreductase 92.6 0.22 7.4E-06 44.0 6.4 93 86-210 4-99 (336)
94 4fb5_A Probable oxidoreductase 92.5 0.16 5.6E-06 44.7 5.6 37 85-121 24-65 (393)
95 4had_A Probable oxidoreductase 92.4 0.2 6.8E-06 44.3 6.0 35 85-121 22-57 (350)
96 3ing_A Homoserine dehydrogenas 92.2 0.12 4.1E-06 47.2 4.4 37 85-121 3-43 (325)
97 4h3v_A Oxidoreductase domain p 92.2 0.048 1.6E-06 48.2 1.6 98 86-210 6-108 (390)
98 1gtm_A Glutamate dehydrogenase 91.5 0.22 7.7E-06 47.0 5.6 32 87-121 213-245 (419)
99 3btv_A Galactose/lactose metab 91.5 0.082 2.8E-06 49.2 2.5 100 86-210 20-128 (438)
100 3do5_A HOM, homoserine dehydro 91.4 0.23 7.9E-06 45.3 5.4 36 86-121 2-43 (327)
101 4ew6_A D-galactose-1-dehydroge 91.3 0.21 7.2E-06 44.6 4.9 89 86-210 25-114 (330)
102 2vt3_A REX, redox-sensing tran 91.1 0.33 1.1E-05 41.9 5.8 96 86-211 85-180 (215)
103 3ius_A Uncharacterized conserv 91.1 1.3 4.5E-05 37.1 9.5 33 85-120 4-36 (286)
104 3kb6_A D-lactate dehydrogenase 91.0 0.3 1E-05 44.5 5.7 30 87-119 142-171 (334)
105 3fwz_A Inner membrane protein 90.8 0.23 7.9E-06 38.5 4.2 33 85-120 6-38 (140)
106 3c8m_A Homoserine dehydrogenas 90.8 0.14 4.7E-06 46.5 3.2 36 86-121 6-46 (331)
107 3upl_A Oxidoreductase; rossman 90.7 0.26 8.9E-06 47.2 5.2 35 85-121 22-56 (446)
108 2nvw_A Galactose/lactose metab 90.7 0.16 5.6E-06 48.1 3.8 101 85-210 38-147 (479)
109 3evt_A Phosphoglycerate dehydr 90.5 0.26 8.8E-06 44.9 4.8 32 87-121 138-169 (324)
110 3o9z_A Lipopolysaccaride biosy 90.5 0.4 1.4E-05 42.5 5.9 95 86-210 3-105 (312)
111 3v5n_A Oxidoreductase; structu 90.0 0.3 1E-05 45.0 4.8 94 85-209 36-142 (417)
112 3abi_A Putative uncharacterize 90.0 0.095 3.2E-06 47.3 1.4 94 85-207 15-108 (365)
113 3ip3_A Oxidoreductase, putativ 89.8 0.2 6.8E-06 44.4 3.3 97 85-210 1-100 (337)
114 4g2n_A D-isomer specific 2-hyd 89.7 0.3 1E-05 44.9 4.6 32 87-121 174-205 (345)
115 2pi1_A D-lactate dehydrogenase 89.5 0.31 1.1E-05 44.4 4.5 33 86-121 141-173 (334)
116 1xdw_A NAD+-dependent (R)-2-hy 89.3 0.34 1.2E-05 43.8 4.5 32 86-120 146-177 (331)
117 3u3x_A Oxidoreductase; structu 89.3 0.23 7.9E-06 44.8 3.4 94 86-210 26-121 (361)
118 1qp8_A Formate dehydrogenase; 89.2 0.36 1.2E-05 43.3 4.5 32 86-120 124-155 (303)
119 1dxy_A D-2-hydroxyisocaproate 89.1 0.36 1.2E-05 43.8 4.5 32 86-120 145-176 (333)
120 3pp8_A Glyoxylate/hydroxypyruv 88.7 0.34 1.2E-05 43.8 4.1 32 87-121 140-171 (315)
121 3hg7_A D-isomer specific 2-hyd 88.7 0.4 1.4E-05 43.8 4.5 32 87-121 141-172 (324)
122 3gg9_A D-3-phosphoglycerate de 88.6 0.4 1.4E-05 44.1 4.5 32 86-120 160-191 (352)
123 2yq5_A D-isomer specific 2-hyd 88.5 0.41 1.4E-05 44.0 4.5 32 87-121 149-180 (343)
124 4e5n_A Thermostable phosphite 88.5 0.36 1.2E-05 43.9 4.1 31 87-120 146-176 (330)
125 2g76_A 3-PGDH, D-3-phosphoglyc 88.4 0.43 1.5E-05 43.6 4.6 32 87-121 166-197 (335)
126 1gdh_A D-glycerate dehydrogena 88.3 0.45 1.5E-05 42.9 4.6 32 86-120 146-177 (320)
127 1lc0_A Biliverdin reductase A; 88.3 0.48 1.6E-05 41.6 4.7 92 85-210 6-98 (294)
128 3jtm_A Formate dehydrogenase, 88.2 0.41 1.4E-05 44.1 4.3 31 87-120 165-195 (351)
129 1mx3_A CTBP1, C-terminal bindi 88.2 0.45 1.5E-05 43.6 4.6 31 87-120 169-199 (347)
130 4hy3_A Phosphoglycerate oxidor 88.2 0.42 1.4E-05 44.4 4.4 31 87-120 177-207 (365)
131 2cuk_A Glycerate dehydrogenase 87.8 0.5 1.7E-05 42.5 4.5 33 86-121 144-176 (311)
132 1j4a_A D-LDH, D-lactate dehydr 87.8 0.49 1.7E-05 42.8 4.5 33 86-121 146-178 (333)
133 4dgs_A Dehydrogenase; structur 87.7 0.5 1.7E-05 43.4 4.6 31 87-120 172-202 (340)
134 3oqb_A Oxidoreductase; structu 87.7 0.23 7.9E-06 44.6 2.3 34 176-210 83-116 (383)
135 1wwk_A Phosphoglycerate dehydr 87.6 0.52 1.8E-05 42.2 4.5 33 86-121 142-174 (307)
136 3gvx_A Glycerate dehydrogenase 87.2 0.44 1.5E-05 42.8 3.8 31 87-120 123-153 (290)
137 2w2k_A D-mandelate dehydrogena 86.9 0.61 2.1E-05 42.5 4.6 31 87-120 164-195 (348)
138 2ekl_A D-3-phosphoglycerate de 86.8 0.61 2.1E-05 41.8 4.6 33 86-121 142-174 (313)
139 3llv_A Exopolyphosphatase-rela 86.8 0.59 2E-05 35.6 3.9 30 87-119 7-36 (141)
140 3two_A Mannitol dehydrogenase; 86.5 1.3 4.3E-05 39.2 6.4 91 87-210 178-268 (348)
141 3d4o_A Dipicolinate synthase s 86.5 0.7 2.4E-05 40.5 4.7 31 87-120 156-186 (293)
142 1sc6_A PGDH, D-3-phosphoglycer 86.5 0.61 2.1E-05 43.6 4.5 31 87-120 146-176 (404)
143 1lss_A TRK system potassium up 86.5 0.9 3.1E-05 33.8 4.7 30 87-119 5-34 (140)
144 3oet_A Erythronate-4-phosphate 86.2 0.65 2.2E-05 43.5 4.5 30 87-119 120-149 (381)
145 2o4c_A Erythronate-4-phosphate 85.9 0.7 2.4E-05 43.2 4.5 30 87-119 117-146 (380)
146 2nac_A NAD-dependent formate d 85.7 0.67 2.3E-05 43.4 4.3 31 87-120 192-222 (393)
147 2rir_A Dipicolinate synthase, 85.4 0.87 3E-05 39.9 4.7 32 86-120 157-188 (300)
148 3ba1_A HPPR, hydroxyphenylpyru 85.1 0.68 2.3E-05 42.1 4.0 31 87-120 165-195 (333)
149 2d0i_A Dehydrogenase; structur 85.0 0.77 2.6E-05 41.5 4.3 33 86-121 146-178 (333)
150 2gcg_A Glyoxylate reductase/hy 84.9 0.74 2.5E-05 41.4 4.1 32 86-120 155-186 (330)
151 2dbq_A Glyoxylate reductase; D 84.8 0.87 3E-05 41.1 4.5 33 86-121 150-182 (334)
152 3l4b_C TRKA K+ channel protien 84.8 0.52 1.8E-05 38.9 2.8 31 87-120 1-31 (218)
153 2g1u_A Hypothetical protein TM 84.3 1.3 4.4E-05 34.6 4.8 31 86-119 19-49 (155)
154 2j6i_A Formate dehydrogenase; 84.1 0.76 2.6E-05 42.2 3.9 30 87-119 165-195 (364)
155 1vpd_A Tartronate semialdehyde 83.9 1 3.6E-05 38.5 4.4 31 85-118 4-34 (299)
156 3k5p_A D-3-phosphoglycerate de 83.6 1 3.4E-05 42.7 4.5 30 87-119 157-186 (416)
157 1id1_A Putative potassium chan 83.2 1.1 3.7E-05 34.8 3.9 30 87-119 4-33 (153)
158 2bma_A Glutamate dehydrogenase 82.3 4.1 0.00014 39.4 8.3 101 87-204 253-364 (470)
159 3dqp_A Oxidoreductase YLBE; al 82.1 2.5 8.6E-05 34.1 5.9 30 87-119 1-31 (219)
160 1yb4_A Tartronic semialdehyde 81.6 1.4 4.8E-05 37.5 4.4 30 87-119 4-33 (295)
161 3l9w_A Glutathione-regulated p 81.1 1.1 3.9E-05 41.7 3.9 30 87-119 5-34 (413)
162 4huj_A Uncharacterized protein 80.8 1.5 5E-05 36.6 4.1 33 86-121 23-55 (220)
163 3c85_A Putative glutathione-re 80.6 1.2 4E-05 35.6 3.3 32 87-120 40-71 (183)
164 3gt0_A Pyrroline-5-carboxylate 80.1 1.4 4.8E-05 37.2 3.8 24 85-108 1-24 (247)
165 1ygy_A PGDH, D-3-phosphoglycer 79.6 1.7 5.7E-05 41.8 4.6 31 87-120 143-173 (529)
166 3n58_A Adenosylhomocysteinase; 79.4 1.7 5.8E-05 42.0 4.5 30 87-119 248-277 (464)
167 1yqd_A Sinapyl alcohol dehydro 79.3 2 6.8E-05 38.4 4.7 94 88-209 190-284 (366)
168 3d64_A Adenosylhomocysteinase; 79.2 1.7 6E-05 42.0 4.6 30 87-119 278-307 (494)
169 2vns_A Metalloreductase steap3 79.1 1.8 6.1E-05 36.0 4.1 32 85-119 27-58 (215)
170 3c24_A Putative oxidoreductase 79.0 2.1 7.1E-05 36.8 4.6 32 85-119 10-42 (286)
171 3cky_A 2-hydroxymethyl glutara 78.5 2.1 7E-05 36.7 4.4 31 86-119 4-34 (301)
172 3g0o_A 3-hydroxyisobutyrate de 78.4 2.1 7.3E-05 37.2 4.5 32 85-119 6-37 (303)
173 3h9u_A Adenosylhomocysteinase; 78.1 2 6.8E-05 41.1 4.5 31 87-121 212-242 (436)
174 3ggo_A Prephenate dehydrogenas 77.8 2.2 7.6E-05 37.9 4.6 34 85-119 32-65 (314)
175 3oa2_A WBPB; oxidoreductase, s 77.8 2.3 7.8E-05 37.7 4.6 95 86-210 3-106 (318)
176 1iuk_A Hypothetical protein TT 77.6 8.6 0.0003 30.3 7.5 87 87-210 14-104 (140)
177 4ezb_A Uncharacterized conserv 77.6 2.4 8.1E-05 37.6 4.6 33 85-119 23-55 (317)
178 2ew2_A 2-dehydropantoate 2-red 77.5 2.4 8.4E-05 35.9 4.5 32 85-119 2-33 (316)
179 2hmt_A YUAA protein; RCK, KTN, 77.0 2 6.8E-05 31.9 3.4 30 87-119 7-36 (144)
180 2ahr_A Putative pyrroline carb 76.9 2.5 8.4E-05 35.6 4.4 21 87-107 4-24 (259)
181 4g65_A TRK system potassium up 76.8 1.7 5.8E-05 41.0 3.6 31 86-119 3-33 (461)
182 3pef_A 6-phosphogluconate dehy 76.4 2.7 9.1E-05 36.1 4.5 30 87-119 2-31 (287)
183 3dty_A Oxidoreductase, GFO/IDH 76.2 2.3 7.8E-05 38.6 4.2 35 85-121 11-49 (398)
184 4dll_A 2-hydroxy-3-oxopropiona 76.1 2.5 8.7E-05 37.2 4.4 31 86-119 31-61 (320)
185 3goh_A Alcohol dehydrogenase, 76.1 5 0.00017 34.7 6.3 87 87-208 144-230 (315)
186 2f1k_A Prephenate dehydrogenas 76.0 2.8 9.7E-05 35.5 4.5 39 87-130 1-39 (279)
187 1v8b_A Adenosylhomocysteinase; 76.0 1.9 6.6E-05 41.5 3.8 30 87-119 258-287 (479)
188 3qha_A Putative oxidoreductase 75.8 2 6.7E-05 37.5 3.6 31 86-119 15-45 (296)
189 1c1d_A L-phenylalanine dehydro 75.6 2.8 9.5E-05 38.8 4.7 31 87-121 176-206 (355)
190 3d1l_A Putative NADP oxidoredu 75.3 2.7 9.2E-05 35.5 4.2 32 87-121 11-42 (266)
191 4ina_A Saccharopine dehydrogen 75.2 1.2 4E-05 41.1 2.0 100 87-206 2-106 (405)
192 3dtt_A NADP oxidoreductase; st 74.9 3.3 0.00011 35.0 4.7 32 85-119 18-49 (245)
193 2h78_A Hibadh, 3-hydroxyisobut 74.7 3 0.0001 35.9 4.4 30 87-119 4-33 (302)
194 3gvp_A Adenosylhomocysteinase 74.7 2.8 9.6E-05 40.1 4.5 29 87-118 221-249 (435)
195 1vm6_A DHPR, dihydrodipicolina 74.5 5.1 0.00017 35.3 5.8 33 86-121 12-45 (228)
196 3doj_A AT3G25530, dehydrogenas 74.4 3.3 0.00011 36.2 4.7 31 86-119 21-51 (310)
197 3l6d_A Putative oxidoreductase 74.0 2.6 8.8E-05 37.0 3.9 32 85-119 8-39 (306)
198 1oi7_A Succinyl-COA synthetase 73.4 4.1 0.00014 36.1 5.0 89 86-209 7-97 (288)
199 4gmf_A Yersiniabactin biosynth 73.2 2.9 9.9E-05 38.5 4.1 36 85-122 6-41 (372)
200 2g5c_A Prephenate dehydrogenas 73.1 3.7 0.00013 34.9 4.6 32 87-119 2-33 (281)
201 3i6i_A Putative leucoanthocyan 73.1 2.4 8.1E-05 36.9 3.4 22 87-108 11-33 (346)
202 2gf2_A Hibadh, 3-hydroxyisobut 73.0 2.9 9.8E-05 35.7 3.8 30 87-119 1-30 (296)
203 2raf_A Putative dinucleotide-b 72.9 3.9 0.00013 33.8 4.5 32 85-119 18-49 (209)
204 4e21_A 6-phosphogluconate dehy 72.1 3.7 0.00013 37.5 4.5 30 87-119 23-52 (358)
205 1uuf_A YAHK, zinc-type alcohol 71.9 3.1 0.0001 37.4 3.9 95 87-209 196-290 (369)
206 1jay_A Coenzyme F420H2:NADP+ o 71.9 4.7 0.00016 32.6 4.7 31 87-120 1-32 (212)
207 4gbj_A 6-phosphogluconate dehy 71.8 3.3 0.00011 36.5 4.1 32 85-119 4-35 (297)
208 2cf5_A Atccad5, CAD, cinnamyl 71.5 2.5 8.6E-05 37.6 3.2 94 88-209 183-277 (357)
209 3ff4_A Uncharacterized protein 71.4 14 0.0005 28.7 7.3 82 86-207 4-89 (122)
210 3b1f_A Putative prephenate deh 71.4 3.7 0.00013 35.0 4.2 33 86-119 6-38 (290)
211 1i36_A Conserved hypothetical 71.1 3.8 0.00013 34.4 4.1 31 87-121 1-31 (264)
212 2uyy_A N-PAC protein; long-cha 70.4 3.4 0.00012 35.8 3.8 31 86-119 30-60 (316)
213 1z82_A Glycerol-3-phosphate de 70.3 4.4 0.00015 35.6 4.5 35 83-120 11-45 (335)
214 3aog_A Glutamate dehydrogenase 70.0 8 0.00027 37.0 6.5 32 87-121 236-267 (440)
215 2d8a_A PH0655, probable L-thre 69.9 3.7 0.00013 36.1 4.0 94 88-209 170-269 (348)
216 2dq4_A L-threonine 3-dehydroge 69.7 4.7 0.00016 35.4 4.5 28 88-118 167-195 (343)
217 3krt_A Crotonyl COA reductase; 69.3 8.3 0.00028 35.5 6.3 40 87-131 230-270 (456)
218 3oj0_A Glutr, glutamyl-tRNA re 69.2 2.8 9.4E-05 32.2 2.6 31 87-121 22-52 (144)
219 1yqg_A Pyrroline-5-carboxylate 68.9 4.2 0.00014 34.0 3.9 31 87-119 1-31 (263)
220 2vhw_A Alanine dehydrogenase; 68.7 5.1 0.00017 36.5 4.7 32 85-119 167-198 (377)
221 1piw_A Hypothetical zinc-type 68.6 6.4 0.00022 34.9 5.2 91 87-209 181-278 (360)
222 1x13_A NAD(P) transhydrogenase 68.5 4.8 0.00017 37.2 4.5 31 86-119 172-202 (401)
223 2vn8_A Reticulon-4-interacting 68.5 8.3 0.00028 34.3 6.0 30 87-119 185-215 (375)
224 1ks9_A KPA reductase;, 2-dehyd 68.2 5.6 0.00019 33.3 4.5 31 87-120 1-31 (291)
225 3p2y_A Alanine dehydrogenase/p 68.2 4.2 0.00014 38.1 4.0 32 85-119 183-214 (381)
226 3ip1_A Alcohol dehydrogenase, 67.8 12 0.00043 33.7 7.1 95 87-210 215-321 (404)
227 1r0k_A 1-deoxy-D-xylulose 5-ph 67.6 5 0.00017 37.8 4.5 41 87-128 5-46 (388)
228 3e48_A Putative nucleoside-dip 67.4 3.3 0.00011 34.7 2.9 30 87-118 1-31 (289)
229 2qyt_A 2-dehydropantoate 2-red 67.1 5.2 0.00018 34.2 4.2 36 85-120 7-45 (317)
230 1bg6_A N-(1-D-carboxylethyl)-L 66.8 5.9 0.0002 34.4 4.5 31 86-119 4-34 (359)
231 2r6j_A Eugenol synthase 1; phe 66.7 5.4 0.00018 34.0 4.2 24 85-108 10-34 (318)
232 3dfu_A Uncharacterized protein 66.4 2.6 9E-05 36.8 2.2 33 86-121 6-38 (232)
233 3fpc_A NADP-dependent alcohol 66.4 4.5 0.00015 35.7 3.8 96 87-210 168-269 (352)
234 3hwr_A 2-dehydropantoate 2-red 66.1 7.6 0.00026 34.1 5.1 32 85-119 18-49 (318)
235 1l7d_A Nicotinamide nucleotide 66.0 5.9 0.0002 36.1 4.5 32 85-119 171-202 (384)
236 2nu8_A Succinyl-COA ligase [AD 66.0 5.5 0.00019 35.2 4.2 91 85-209 6-97 (288)
237 3r3j_A Glutamate dehydrogenase 65.8 10 0.00036 36.5 6.4 101 87-204 240-351 (456)
238 1y81_A Conserved hypothetical 65.8 6.9 0.00024 30.8 4.4 85 85-208 13-101 (138)
239 3jv7_A ADH-A; dehydrogenase, n 65.6 5.1 0.00017 35.1 3.9 97 87-209 173-272 (345)
240 1xa0_A Putative NADPH dependen 65.4 15 0.00051 31.8 6.8 30 88-120 152-182 (328)
241 3ktd_A Prephenate dehydrogenas 65.3 5.1 0.00017 36.5 3.9 41 86-131 8-48 (341)
242 3pdu_A 3-hydroxyisobutyrate de 65.2 4.1 0.00014 35.0 3.1 30 87-119 2-31 (287)
243 2yjz_A Metalloreductase steap4 68.8 1.3 4.5E-05 36.9 0.0 32 85-119 18-49 (201)
244 1gpj_A Glutamyl-tRNA reductase 65.2 4.9 0.00017 36.9 3.9 32 87-121 168-200 (404)
245 2pv7_A T-protein [includes: ch 64.6 5.8 0.0002 34.5 4.1 32 85-119 20-52 (298)
246 1np3_A Ketol-acid reductoisome 64.5 5.8 0.0002 35.5 4.1 31 87-120 17-47 (338)
247 3ce6_A Adenosylhomocysteinase; 64.5 6.2 0.00021 38.0 4.5 30 87-119 275-304 (494)
248 4dio_A NAD(P) transhydrogenase 64.4 6.4 0.00022 37.2 4.5 33 85-121 189-221 (405)
249 3uog_A Alcohol dehydrogenase; 64.4 9.7 0.00033 33.8 5.6 95 87-210 191-290 (363)
250 4ej6_A Putative zinc-binding d 64.1 18 0.0006 32.3 7.2 97 87-209 184-286 (370)
251 3qsg_A NAD-binding phosphogluc 63.7 5.6 0.00019 35.0 3.8 31 86-119 24-55 (312)
252 2yv2_A Succinyl-COA synthetase 63.7 12 0.0004 33.3 5.9 88 86-208 13-103 (297)
253 2aef_A Calcium-gated potassium 63.4 5.1 0.00017 33.1 3.3 29 86-118 9-37 (234)
254 2cvz_A Dehydrogenase, 3-hydrox 63.3 5.1 0.00018 33.8 3.4 29 87-119 2-30 (289)
255 1leh_A Leucine dehydrogenase; 63.3 7.4 0.00025 35.9 4.7 31 87-121 174-204 (364)
256 4dvj_A Putative zinc-dependent 62.8 10 0.00034 33.8 5.3 96 87-206 173-269 (363)
257 3nkl_A UDP-D-quinovosamine 4-d 62.6 13 0.00045 27.9 5.3 34 86-121 4-37 (141)
258 1evy_A Glycerol-3-phosphate de 62.6 7.7 0.00026 34.4 4.5 32 85-119 13-45 (366)
259 3eag_A UDP-N-acetylmuramate:L- 62.3 29 0.001 30.5 8.3 77 87-193 5-83 (326)
260 1rjw_A ADH-HT, alcohol dehydro 62.1 11 0.00036 33.2 5.3 30 87-119 166-195 (339)
261 3tri_A Pyrroline-5-carboxylate 62.0 6.4 0.00022 34.1 3.8 22 87-108 4-25 (280)
262 2i76_A Hypothetical protein; N 62.0 2.6 8.8E-05 36.3 1.3 32 86-121 2-33 (276)
263 3kkj_A Amine oxidase, flavin-c 61.2 8.4 0.00029 29.2 3.9 31 85-118 1-31 (336)
264 3q2o_A Phosphoribosylaminoimid 61.2 8.8 0.0003 34.3 4.7 31 87-120 15-45 (389)
265 3jyn_A Quinone oxidoreductase; 60.5 8.2 0.00028 33.6 4.3 94 87-209 142-241 (325)
266 2d5c_A AROE, shikimate 5-dehyd 60.5 7.6 0.00026 33.0 3.9 30 88-120 118-147 (263)
267 3gg2_A Sugar dehydrogenase, UD 60.3 8.3 0.00028 36.2 4.5 32 85-119 1-32 (450)
268 1e3i_A Alcohol dehydrogenase, 59.3 12 0.00042 33.1 5.3 29 87-118 197-226 (376)
269 2eez_A Alanine dehydrogenase; 59.1 10 0.00034 34.3 4.7 31 86-119 166-196 (369)
270 2rcy_A Pyrroline carboxylate r 59.0 5.4 0.00019 33.3 2.7 21 87-107 5-25 (262)
271 4a0s_A Octenoyl-COA reductase/ 59.0 14 0.00046 33.8 5.6 40 87-131 222-262 (447)
272 2pgd_A 6-phosphogluconate dehy 58.7 7.8 0.00027 36.5 4.0 30 87-119 3-32 (482)
273 3uko_A Alcohol dehydrogenase c 58.7 8.9 0.0003 34.2 4.3 29 87-118 195-224 (378)
274 1p0f_A NADP-dependent alcohol 58.7 10 0.00035 33.6 4.6 29 87-118 193-222 (373)
275 3qwb_A Probable quinone oxidor 58.6 6.2 0.00021 34.4 3.2 94 87-209 150-249 (334)
276 2izz_A Pyrroline-5-carboxylate 58.6 7.6 0.00026 34.2 3.7 35 86-120 22-57 (322)
277 4a2c_A Galactitol-1-phosphate 58.3 19 0.00064 31.3 6.2 98 87-210 162-263 (346)
278 2b5w_A Glucose dehydrogenase; 57.7 23 0.00079 31.2 6.8 97 87-209 174-275 (357)
279 1txg_A Glycerol-3-phosphate de 57.7 8.6 0.00029 33.1 3.9 31 87-120 1-31 (335)
280 4gwg_A 6-phosphogluconate dehy 57.4 8.3 0.00028 36.9 4.0 32 86-120 4-35 (484)
281 1pgj_A 6PGDH, 6-PGDH, 6-phosph 57.4 8.2 0.00028 36.4 3.9 31 87-120 2-32 (478)
282 2p4q_A 6-phosphogluconate dehy 57.3 8.2 0.00028 36.8 4.0 34 84-120 8-41 (497)
283 4e12_A Diketoreductase; oxidor 56.6 12 0.0004 32.2 4.5 31 87-121 5-35 (283)
284 1f8f_A Benzyl alcohol dehydrog 56.4 6.9 0.00024 34.7 3.1 28 88-118 193-221 (371)
285 2ph5_A Homospermidine synthase 55.9 4.8 0.00016 39.0 2.1 35 86-121 13-48 (480)
286 2yv1_A Succinyl-COA ligase [AD 55.8 12 0.00042 33.1 4.7 86 86-206 13-100 (294)
287 2jhf_A Alcohol dehydrogenase E 55.7 20 0.00069 31.7 6.0 29 87-118 193-222 (374)
288 2iz1_A 6-phosphogluconate dehy 55.4 8.6 0.0003 36.1 3.7 30 87-119 6-35 (474)
289 4dup_A Quinone oxidoreductase; 55.3 12 0.00042 33.0 4.6 30 87-119 169-199 (353)
290 2cdc_A Glucose dehydrogenase g 54.7 9.4 0.00032 33.9 3.7 30 87-119 182-211 (366)
291 1cdo_A Alcohol dehydrogenase; 54.4 18 0.0006 32.1 5.4 29 87-118 194-223 (374)
292 3ego_A Probable 2-dehydropanto 54.3 9.2 0.00032 33.5 3.5 31 85-119 1-31 (307)
293 2fzw_A Alcohol dehydrogenase c 54.3 13 0.00043 33.0 4.4 29 87-118 192-221 (373)
294 1vj0_A Alcohol dehydrogenase, 53.8 7.9 0.00027 34.7 3.1 100 87-209 197-300 (380)
295 3mw9_A GDH 1, glutamate dehydr 53.6 50 0.0017 32.1 8.8 32 87-121 245-276 (501)
296 3i83_A 2-dehydropantoate 2-red 53.5 14 0.00047 32.3 4.5 32 85-119 1-32 (320)
297 2zyd_A 6-phosphogluconate dehy 53.0 11 0.00037 35.7 4.0 32 86-120 15-46 (480)
298 2jv8_A Uncharacterized protein 52.4 7.1 0.00024 28.1 2.0 29 142-172 11-39 (73)
299 1e3j_A NADP(H)-dependent ketos 51.4 36 0.0012 29.8 6.9 29 87-118 170-198 (352)
300 3gpi_A NAD-dependent epimerase 51.3 23 0.00079 29.5 5.4 30 87-119 4-33 (286)
301 3sc6_A DTDP-4-dehydrorhamnose 50.9 20 0.00069 29.7 5.0 45 85-132 4-53 (287)
302 3s2e_A Zinc-containing alcohol 50.8 8.1 0.00028 33.7 2.6 95 87-209 168-265 (340)
303 3gms_A Putative NADPH:quinone 50.5 13 0.00045 32.5 3.9 30 87-119 146-176 (340)
304 2z2v_A Hypothetical protein PH 49.9 15 0.00053 33.3 4.4 30 86-119 16-45 (365)
305 2tmg_A Protein (glutamate dehy 49.9 18 0.00062 34.2 5.0 33 87-121 210-242 (415)
306 2hk9_A Shikimate dehydrogenase 49.7 13 0.00045 32.0 3.8 31 87-120 130-160 (275)
307 3gqv_A Enoyl reductase; medium 49.1 31 0.0011 30.7 6.2 40 87-132 166-206 (371)
308 3h2s_A Putative NADH-flavin re 48.6 21 0.00071 28.3 4.5 30 87-119 1-31 (224)
309 4a9w_A Monooxygenase; baeyer-v 48.2 50 0.0017 27.6 7.1 31 86-119 3-33 (357)
310 1mv8_A GMD, GDP-mannose 6-dehy 47.9 17 0.00059 33.4 4.4 29 87-118 1-29 (436)
311 3k92_A NAD-GDH, NAD-specific g 47.8 16 0.00054 34.8 4.2 33 86-121 221-253 (424)
312 3tqh_A Quinone oxidoreductase; 47.6 8.8 0.0003 33.3 2.3 30 87-119 154-184 (321)
313 4gx0_A TRKA domain protein; me 47.6 14 0.0005 34.7 3.9 30 87-119 349-378 (565)
314 3ew7_A LMO0794 protein; Q8Y8U8 47.5 22 0.00077 27.9 4.5 30 87-119 1-31 (221)
315 3nx4_A Putative oxidoreductase 47.5 26 0.00089 30.1 5.3 93 88-209 149-243 (324)
316 2yfq_A Padgh, NAD-GDH, NAD-spe 47.4 13 0.00043 35.3 3.5 33 87-122 213-245 (421)
317 3obb_A Probable 3-hydroxyisobu 47.2 19 0.00065 31.8 4.4 31 87-120 4-34 (300)
318 2duw_A Putative COA-binding pr 46.8 14 0.00047 29.2 3.1 85 86-207 13-101 (145)
319 3hn2_A 2-dehydropantoate 2-red 46.6 16 0.00053 31.8 3.7 32 85-119 1-32 (312)
320 1v9l_A Glutamate dehydrogenase 46.0 23 0.00077 33.6 5.0 32 87-121 211-242 (421)
321 2eih_A Alcohol dehydrogenase; 45.9 30 0.001 30.2 5.5 29 87-118 168-197 (343)
322 3c7a_A Octopine dehydrogenase; 45.8 15 0.00051 33.0 3.6 32 86-119 2-33 (404)
323 4a27_A Synaptic vesicle membra 45.6 11 0.00038 33.1 2.6 32 87-120 144-176 (349)
324 1wly_A CAAR, 2-haloacrylate re 45.4 23 0.0008 30.7 4.7 30 87-119 147-177 (333)
325 2d59_A Hypothetical protein PH 45.3 24 0.00083 27.6 4.4 82 87-207 23-108 (144)
326 3g17_A Similar to 2-dehydropan 45.1 16 0.00056 31.4 3.6 23 85-107 1-23 (294)
327 1tt7_A YHFP; alcohol dehydroge 45.0 19 0.00065 31.2 4.0 30 88-120 153-183 (330)
328 3a06_A 1-deoxy-D-xylulose 5-ph 45.0 27 0.00092 32.9 5.2 42 87-130 4-46 (376)
329 1lld_A L-lactate dehydrogenase 44.5 23 0.0008 30.5 4.5 23 85-107 6-28 (319)
330 2q3e_A UDP-glucose 6-dehydroge 44.0 19 0.00064 33.6 4.1 32 87-119 6-37 (467)
331 4gx0_A TRKA domain protein; me 43.8 22 0.00076 33.5 4.6 33 85-120 126-158 (565)
332 1f0y_A HCDH, L-3-hydroxyacyl-C 43.4 25 0.00086 30.2 4.5 30 87-119 16-45 (302)
333 3ond_A Adenosylhomocysteinase; 42.9 23 0.00078 34.2 4.5 31 87-121 266-296 (488)
334 1pjc_A Protein (L-alanine dehy 42.8 26 0.00089 31.5 4.7 32 86-120 167-198 (361)
335 4eye_A Probable oxidoreductase 42.6 17 0.00057 31.9 3.3 30 87-119 161-191 (342)
336 2axq_A Saccharopine dehydrogen 42.4 28 0.00095 32.9 5.0 33 86-120 23-55 (467)
337 1bgv_A Glutamate dehydrogenase 42.4 19 0.00065 34.4 3.9 99 87-203 231-341 (449)
338 1zcj_A Peroxisomal bifunctiona 42.2 52 0.0018 30.7 6.8 30 86-118 37-66 (463)
339 3orq_A N5-carboxyaminoimidazol 42.1 26 0.00089 31.3 4.6 30 87-119 13-42 (377)
340 1qor_A Quinone oxidoreductase; 42.0 21 0.0007 30.9 3.8 29 87-118 142-171 (327)
341 3aoe_E Glutamate dehydrogenase 41.9 24 0.00082 33.4 4.4 32 87-121 219-250 (419)
342 2i99_A MU-crystallin homolog; 41.5 25 0.00086 30.9 4.3 34 86-121 135-168 (312)
343 1hdo_A Biliverdin IX beta redu 41.4 34 0.0012 26.4 4.6 30 87-119 4-34 (206)
344 1lnq_A MTHK channels, potassiu 40.7 19 0.00064 31.5 3.3 28 87-118 116-143 (336)
345 3m2p_A UDP-N-acetylglucosamine 40.6 30 0.001 29.1 4.5 32 85-119 1-33 (311)
346 1zej_A HBD-9, 3-hydroxyacyl-CO 40.3 29 0.00098 30.8 4.5 42 86-133 12-53 (293)
347 4b4o_A Epimerase family protei 40.0 31 0.0011 28.9 4.5 30 87-119 1-31 (298)
348 4hv4_A UDP-N-acetylmuramate--L 39.4 71 0.0024 29.9 7.3 74 87-192 23-97 (494)
349 4fcc_A Glutamate dehydrogenase 39.2 33 0.0011 32.9 5.0 100 87-204 236-346 (450)
350 2o3j_A UDP-glucose 6-dehydroge 38.8 25 0.00086 33.0 4.1 34 85-119 8-41 (481)
351 3h2z_A Mannitol-1-phosphate 5- 38.5 17 0.00057 33.8 2.7 30 87-118 1-30 (382)
352 3ghy_A Ketopantoate reductase 35.7 32 0.0011 30.2 4.0 30 87-119 4-33 (335)
353 3bbn_K Ribosomal protein S11; 35.0 92 0.0031 25.3 6.4 65 48-122 60-125 (140)
354 1yj8_A Glycerol-3-phosphate de 34.1 24 0.00082 31.4 3.0 23 85-107 20-42 (375)
355 2y0c_A BCEC, UDP-glucose dehyd 33.8 41 0.0014 31.7 4.6 32 85-119 7-38 (478)
356 3dhn_A NAD-dependent epimerase 33.5 41 0.0014 26.7 4.0 30 87-119 5-35 (227)
357 3pi7_A NADH oxidoreductase; gr 33.4 32 0.0011 30.1 3.6 90 88-209 167-265 (349)
358 1x0v_A GPD-C, GPDH-C, glycerol 33.4 29 0.00099 30.2 3.3 22 86-107 8-29 (354)
359 3r6d_A NAD-dependent epimerase 32.4 51 0.0017 26.3 4.4 29 88-119 7-37 (221)
360 2egg_A AROE, shikimate 5-dehyd 31.9 49 0.0017 28.9 4.6 32 87-121 142-174 (297)
361 3e8x_A Putative NAD-dependent 31.8 54 0.0018 26.4 4.5 31 86-119 21-52 (236)
362 3iup_A Putative NADPH:quinone 31.6 34 0.0012 30.5 3.6 39 88-131 173-213 (379)
363 3r8n_K 30S ribosomal protein S 31.2 76 0.0026 24.9 5.1 34 85-122 68-102 (117)
364 1jvb_A NAD(H)-dependent alcoho 30.7 32 0.0011 30.1 3.1 30 87-118 172-202 (347)
365 4hb9_A Similarities with proba 30.7 53 0.0018 28.1 4.5 29 87-118 2-30 (412)
366 2dpo_A L-gulonate 3-dehydrogen 30.5 46 0.0016 29.7 4.2 29 87-118 7-35 (319)
367 2ydy_A Methionine adenosyltran 30.4 56 0.0019 27.3 4.6 30 87-119 3-33 (315)
368 1dlj_A UDP-glucose dehydrogena 30.3 30 0.001 31.6 3.0 29 87-119 1-29 (402)
369 3vps_A TUNA, NAD-dependent epi 30.3 50 0.0017 27.4 4.2 32 85-119 6-38 (321)
370 3qvo_A NMRA family protein; st 30.0 66 0.0022 26.1 4.8 32 86-119 23-55 (236)
371 4eez_A Alcohol dehydrogenase 1 29.7 53 0.0018 28.3 4.4 98 88-210 166-266 (348)
372 1ur5_A Malate dehydrogenase; o 29.3 62 0.0021 28.4 4.8 33 86-121 2-34 (309)
373 3fr7_A Putative ketol-acid red 28.9 54 0.0018 32.2 4.6 35 87-121 55-92 (525)
374 3k96_A Glycerol-3-phosphate de 28.9 41 0.0014 30.3 3.7 22 86-107 29-50 (356)
375 3lk7_A UDP-N-acetylmuramoylala 28.8 1.1E+02 0.0039 28.0 6.7 31 87-121 10-40 (451)
376 4egb_A DTDP-glucose 4,6-dehydr 28.6 61 0.0021 27.5 4.5 35 86-121 24-59 (346)
377 1kjq_A GART 2, phosphoribosylg 28.5 69 0.0023 28.1 5.0 33 85-120 10-42 (391)
378 2fp4_A Succinyl-COA ligase [GD 28.5 51 0.0017 29.3 4.1 89 88-210 15-105 (305)
379 3k5i_A Phosphoribosyl-aminoimi 28.2 47 0.0016 30.1 3.9 32 86-120 24-55 (403)
380 2r85_A PURP protein PF1517; AT 28.2 53 0.0018 27.8 4.1 32 85-120 1-32 (334)
381 3h5n_A MCCB protein; ubiquitin 27.4 28 0.00097 31.5 2.3 100 86-192 118-225 (353)
382 1omo_A Alanine dehydrogenase; 27.3 65 0.0022 28.5 4.6 34 86-121 125-158 (322)
383 2rh8_A Anthocyanidin reductase 27.3 88 0.003 26.4 5.3 34 85-121 8-43 (338)
384 2dwc_A PH0318, 433AA long hypo 27.0 72 0.0025 28.6 4.9 33 85-120 18-50 (433)
385 2a35_A Hypothetical protein PA 26.9 48 0.0016 25.9 3.3 33 85-118 4-37 (215)
386 2vqe_K 30S ribosomal protein S 26.8 93 0.0032 24.8 5.0 34 85-122 78-112 (129)
387 2wtb_A MFP2, fatty acid multif 26.3 1.2E+02 0.004 30.3 6.7 30 87-119 313-342 (725)
388 1y7t_A Malate dehydrogenase; N 25.9 68 0.0023 28.0 4.4 24 85-108 3-27 (327)
389 2x4g_A Nucleoside-diphosphate- 25.9 77 0.0026 26.7 4.6 30 87-119 14-44 (342)
390 1yvv_A Amine oxidase, flavin-c 25.8 60 0.0021 27.2 3.9 30 86-118 2-31 (336)
391 3c1o_A Eugenol synthase; pheny 25.7 58 0.002 27.4 3.8 23 86-108 4-27 (321)
392 1e6u_A GDP-fucose synthetase; 25.7 87 0.003 26.1 4.9 30 87-119 4-34 (321)
393 1a5z_A L-lactate dehydrogenase 25.2 58 0.002 28.6 3.8 21 87-107 1-21 (319)
394 2ewd_A Lactate dehydrogenase,; 24.8 61 0.0021 28.2 3.9 23 86-108 4-26 (317)
395 3st7_A Capsular polysaccharide 24.4 74 0.0025 27.5 4.3 44 87-132 1-45 (369)
396 3fbs_A Oxidoreductase; structu 24.3 84 0.0029 25.5 4.4 32 85-119 1-32 (297)
397 1smk_A Malate dehydrogenase, g 24.1 84 0.0029 27.8 4.7 24 85-108 7-31 (326)
398 1ff9_A Saccharopine reductase; 23.9 78 0.0027 29.5 4.6 30 87-119 4-33 (450)
399 1ek6_A UDP-galactose 4-epimera 23.8 75 0.0026 26.9 4.2 31 85-118 1-32 (348)
400 1ryi_A Glycine oxidase; flavop 23.8 92 0.0031 26.6 4.8 31 85-118 16-46 (382)
401 1iow_A DD-ligase, DDLB, D-ALA\ 23.7 86 0.0029 26.1 4.5 33 85-120 1-42 (306)
402 3ruf_A WBGU; rossmann fold, UD 23.5 89 0.0031 26.5 4.6 31 86-119 25-56 (351)
403 1hyh_A L-hicdh, L-2-hydroxyiso 23.0 75 0.0026 27.5 4.1 22 87-108 2-23 (309)
404 4e4t_A Phosphoribosylaminoimid 23.0 83 0.0028 28.7 4.5 30 87-119 36-65 (419)
405 3itj_A Thioredoxin reductase 1 22.8 79 0.0027 26.2 4.0 34 84-120 20-53 (338)
406 4ea9_A Perosamine N-acetyltran 22.6 89 0.0031 25.4 4.3 32 87-121 13-44 (220)
407 4gj1_A 1-(5-phosphoribosyl)-5- 22.5 53 0.0018 28.1 3.0 22 188-209 85-106 (243)
408 3ko8_A NAD-dependent epimerase 22.4 96 0.0033 25.7 4.5 30 87-119 1-31 (312)
409 2gf3_A MSOX, monomeric sarcosi 22.1 95 0.0033 26.5 4.5 31 85-118 2-32 (389)
410 3ay3_A NAD-dependent epimerase 22.0 55 0.0019 26.9 2.9 31 86-119 2-33 (267)
411 2uzz_A N-methyl-L-tryptophan o 21.9 80 0.0027 26.9 4.0 31 85-118 1-31 (372)
412 1nyt_A Shikimate 5-dehydrogena 21.9 98 0.0033 26.3 4.5 31 87-120 120-150 (271)
413 3mog_A Probable 3-hydroxybutyr 21.5 73 0.0025 30.1 3.9 30 87-119 6-35 (483)
414 1qyd_A Pinoresinol-lariciresin 21.5 83 0.0028 26.1 3.9 29 87-118 5-34 (313)
415 3rp8_A Flavoprotein monooxygen 21.4 97 0.0033 27.1 4.5 31 85-118 22-52 (407)
416 3ihm_A Styrene monooxygenase A 21.3 77 0.0026 28.5 3.9 32 85-119 21-52 (430)
417 2j8a_A Histone-lysine N-methyl 21.2 95 0.0033 25.2 4.0 82 85-166 1-95 (136)
418 1qyc_A Phenylcoumaran benzylic 20.8 88 0.003 25.9 3.9 22 87-108 5-27 (308)
419 3k6j_A Protein F01G10.3, confi 20.5 1.1E+02 0.0036 29.1 4.9 31 86-119 54-84 (460)
420 4a7p_A UDP-glucose dehydrogena 20.4 1E+02 0.0034 29.0 4.6 32 85-119 7-38 (446)
421 3aw8_A PURK, phosphoribosylami 20.1 81 0.0028 27.5 3.7 30 88-120 1-30 (369)
No 1
>3doc_A Glyceraldehyde 3-phosphate dehydrogenase; ssgcid, structural genomics, PSI, protein structure initiative; HET: NAD; 2.40A {Brucella melitensis biovar ABORTUS2308} PDB: 3l0d_A*
Probab=100.00 E-value=3.9e-57 Score=420.44 Aligned_cols=155 Identities=42% Similarity=0.681 Sum_probs=147.8
Q ss_pred ceeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeCCCChhhhhhhccccCcCcccCceEEEecCCcEEECCeEEEEEec
Q 025793 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (248)
Q Consensus 85 ~~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND~~~~e~~ayLLkYDStHGkf~g~V~v~e~~~L~inGk~I~v~~~ 164 (248)
|++||||||||||||+++|+++++..+++++|+|||+.|+++++||||||||||+|+++|++ ++++|++||++|+|+++
T Consensus 1 m~~kv~INGfGrIGr~v~Ra~~~~~~~~~~ivaiNd~~d~~~~a~l~kyDS~hG~f~~~v~~-~~~~l~i~Gk~I~v~~e 79 (335)
T 3doc_A 1 MAVRVAINGFGRIGRNILRAIVESGRTDIQVVAINDLGPVETNAHLLRYDSVHGRFPKEVEV-AGDTIDVGYGPIKVHAV 79 (335)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCSEEEEEEECSSCHHHHHHHHHEETTTEECSSCCEE-CSSEEESSSSEEEEECC
T ss_pred CCEEEEEECCCcHHHHHHHHHHhccCCCeEEEEEeCCCCHHHHHHHhcccCCCCCCCCeEEE-ecCEEEECCEEEEEEee
Confidence 56899999999999999999998643579999999999999999999999999999999998 68899999999999999
Q ss_pred CCCCCCCCCCCcccEEecCcccccCchhhhHHHHcCCCEEEEcCCCCCCCCCeEEeecCCCCCCCCCCeEEeecC--Ccc
Q 025793 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVRSWM--KNW 242 (248)
Q Consensus 165 ~dP~~i~W~~~GidiVVE~TG~F~~~e~a~~HL~~GAKKVIISAPsk~~D~ptiV~GVN~~~y~~~~~~IISnAS--~~~ 242 (248)
+||+++||+++|+|||+||||.|+++|+++.||++||||||||||+++ ++|||||||||++|+++ ++|||||| +||
T Consensus 80 ~dp~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViIsaps~d-~~p~vV~gVN~~~~~~~-~~IISNasCTTn~ 157 (335)
T 3doc_A 80 RNPAELPWKEENVDIALECTGIFTSRDKAALHLEAGAKRVIVSAPADG-ADLTVVYGVNNDKLTKD-HLVISNASCTTNC 157 (335)
T ss_dssp SSTTSSCTTTTTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCCTT-CSEECCTTTTGGGCCTT-CCEEECCCHHHHH
T ss_pred cccccccccccCCCEEEEccCccCCHHHHHHHHHcCCCEEEECCCCCC-CCCEEecccCHHHhCcc-CCeEecCchhhhh
Confidence 999999999999999999999999999999999999999999999986 67999999999999987 89999999 887
No 2
>3lvf_P GAPDH 1, glyceraldehyde-3-phosphate dehydrogenase 1; oxidoreductase, glycolysis, rossmann fold; HET: NAD; 1.70A {Staphylococcus aureus} PDB: 3vaz_P* 3l6o_Q 3k73_Q 3lc2_O* 3lc7_O 3lc1_P* 3hq4_R* 3kv3_O* 3l4s_Q* 3k9q_Q* 3ksd_Q* 3ksz_O*
Probab=100.00 E-value=1.6e-56 Score=416.76 Aligned_cols=153 Identities=43% Similarity=0.667 Sum_probs=147.2
Q ss_pred ceeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeCCCChhhhhhhccccCcCcccCceEEEecCCcEEECCeEEEEEec
Q 025793 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (248)
Q Consensus 85 ~~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND~~~~e~~ayLLkYDStHGkf~g~V~v~e~~~L~inGk~I~v~~~ 164 (248)
|++||||||||||||+++|+++++ +++++|+|||..|+++++||||||||||+|+++|++ ++++|++||++|+|+++
T Consensus 3 m~~kv~INGfGrIGr~v~R~~~~~--~~~~ivaind~~d~~~~a~l~kyDS~hG~f~~~v~~-~~~~l~inGk~I~v~~e 79 (338)
T 3lvf_P 3 MAVKVAINGFGRIGRLAFRRIQEV--EGLEVVAVNDLTDDDMLAHLLKYDTMQGRFTGEVEV-VDGGFRVNGKEVKSFSE 79 (338)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHTS--TTEEEEEEECSSCHHHHHHHHHCCTTTCCCSSCEEE-ETTEEEETTEEEEEECC
T ss_pred ccEEEEEECCCcHHHHHHHHHHHC--CCceEEEEecCCCHHHHHHHhccCCCCCCcCCeEEE-cCCEEEECCEEEEEEEe
Confidence 789999999999999999999985 479999999999999999999999999999999998 57899999999999999
Q ss_pred CCCCCCCCCCCcccEEecCcccccCchhhhHHHHcCCCEEEEcCCCCCCCCCeEEeecCCCCCCCCCCeEEeecC--Ccc
Q 025793 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVRSWM--KNW 242 (248)
Q Consensus 165 ~dP~~i~W~~~GidiVVE~TG~F~~~e~a~~HL~~GAKKVIISAPsk~~D~ptiV~GVN~~~y~~~~~~IISnAS--~~~ 242 (248)
+||+++||+++|+|||+||||.|++++.++.||++||||||||+|+++ |+|||||||||++|++. ++|||||| +||
T Consensus 80 ~dp~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViISaps~~-d~p~vV~gVN~~~~~~~-~~IISNasCTTn~ 157 (338)
T 3lvf_P 80 PDASKLPWKDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLISAPATG-DLKTIVFNTNHQELDGS-ETVVSGASCTTNS 157 (338)
T ss_dssp SCGGGSCTTTTTCSEEEECSSSCCBHHHHHHHHHTTCSEEEESSCCBS-SCEECCTTTTGGGCCSC-CSEEECCCHHHHH
T ss_pred cccccCCccccCCCEEEEccCCcCCHHHHHHHHHcCCCEEEECCCCCC-CCCEEeccCCHHHcCcc-CCeEecCchhhhh
Confidence 999999999999999999999999999999999999999999999985 78999999999999977 89999999 887
No 3
>4dib_A GAPDH, glyceraldehyde 3-phosphate dehydrogenase; niaid, structural genomics, national institute of allergy AN infectious diseases; 2.55A {Bacillus anthracis}
Probab=100.00 E-value=2e-56 Score=416.90 Aligned_cols=154 Identities=44% Similarity=0.694 Sum_probs=145.8
Q ss_pred ceeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeCCCChhhhhhhccccCcCcccCceEEEecCCcEEECCeEEEEEec
Q 025793 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (248)
Q Consensus 85 ~~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND~~~~e~~ayLLkYDStHGkf~g~V~v~e~~~L~inGk~I~v~~~ 164 (248)
+++||||||||||||+++|+++++ +++++|+|||+.|+++++||||||||||+|+++|++ ++++|++||++|+|+++
T Consensus 3 ~~~kv~INGfGrIGr~v~Ra~~~~--~~~~ivaINd~~d~~~~a~llkyDS~hG~f~~~v~~-~~~~l~inGk~I~v~~e 79 (345)
T 4dib_A 3 AMTRVAINGFGRIGRMVFRQAIKE--SAFEIVAINASYPSETLAHLIKYDTVHGKFDGTVEA-FEDHLLVDGKMIRLLNN 79 (345)
T ss_dssp -CCEEEEECCSHHHHHHHHHHTTC--SSSEEEEEECSSCHHHHHHHHHEETTTEECSSCEEE-CSSEEEETTEEEEEECC
T ss_pred ccEEEEEECCCcHHHHHHHHHHhC--CCceEEEEcCCCCHHHHHHHhcccCCCCCCCCcEEE-cCCEEEECCEEEEEeec
Confidence 358999999999999999999986 479999999999999999999999999999999998 68899999999999999
Q ss_pred CCCCCCCCCCCcccEEecCcccccCchhhhHHHHcCCCEEEEcCCCCCCCCCeEEeecCCCCCCCCCCeEEeecC--Ccc
Q 025793 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVRSWM--KNW 242 (248)
Q Consensus 165 ~dP~~i~W~~~GidiVVE~TG~F~~~e~a~~HL~~GAKKVIISAPsk~~D~ptiV~GVN~~~y~~~~~~IISnAS--~~~ 242 (248)
+||+++||+++|+|||+||||.|+++|+++.||++||||||||+|+++ |+|||||||||++|++..++|||||| +||
T Consensus 80 ~dp~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViISaps~~-d~p~vV~gVN~~~~~~~~~~IISNaSCTTn~ 158 (345)
T 4dib_A 80 RDPKELPWTDLGVEVVIEATGKFNSKEKAILHVEAGAKKVILTAPGKN-EDVTIVVGVNEDQLDITKHTVISNASCTTNC 158 (345)
T ss_dssp SCGGGSCTTTTTEEEEEECSSSCCBHHHHTHHHHTTCSEEEESSCCBS-CSEECCTTTTGGGCCTTTCSEEECCCHHHHH
T ss_pred CChhhCCccccCccEEEEeccCcCCHHHHHHHHHCCCCEEEECCCCCC-CCCEEEecCCHHHcCcccCeEEECCchhhhh
Confidence 999999999999999999999999999999999999999999999985 78999999999999972289999999 887
No 4
>3pym_A GAPDH 3, glyceraldehyde-3-phosphate dehydrogenase 3; NAD(P)-binding rossmann-fold domain, alpha and beta protein, oxidoreductase; HET: NAD; 2.00A {Saccharomyces cerevisiae} PDB: 2i5p_O*
Probab=100.00 E-value=4.5e-56 Score=412.87 Aligned_cols=150 Identities=45% Similarity=0.719 Sum_probs=144.2
Q ss_pred eeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeCC-CChhhhhhhccccCcCcccCceEEEecCCcEEECCeEEEEEecC
Q 025793 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS-GGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNR 165 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND~-~~~e~~ayLLkYDStHGkf~g~V~v~e~~~L~inGk~I~v~~~~ 165 (248)
+||||||||||||+++|+++++ +++++|+|||+ .|+++++||||||||||+|+++|++ ++++|++||++|+|++++
T Consensus 2 ~kv~INGfGrIGr~v~R~~~~~--~~~~ivaiNd~~~d~~~~a~l~kyDS~hG~f~~~v~~-~~~~l~i~Gk~I~v~~e~ 78 (332)
T 3pym_A 2 VRVAINGFGRIGRLVMRIALSR--PNVEVVALNDPFITNDYAAYMFKYDSTHGRYAGEVSH-DDKHIIVDGKKIATYQER 78 (332)
T ss_dssp CEEEEECCSHHHHHHHHHHHHS--TTCEEEEEECTTCCHHHHHHHHHCCTTTCSCSSCEEE-CSSEEEETTEEEEEECCS
T ss_pred eEEEEECCCcHHHHHHHHHHhC--CCcEEEEEeCCCCCHHHHHHHhcccCCCCCCCCcEEE-cCCEEEECCEEEEEEeec
Confidence 6999999999999999999986 47999999998 8999999999999999999999998 688999999999999999
Q ss_pred CCCCCCCCCCcccEEecCcccccCchhhhHHHHcCCCEEEEcCCCCCCCCCeEEeecCCCCCCCCCCeEEeecC--Ccc
Q 025793 166 DPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVRSWM--KNW 242 (248)
Q Consensus 166 dP~~i~W~~~GidiVVE~TG~F~~~e~a~~HL~~GAKKVIISAPsk~~D~ptiV~GVN~~~y~~~~~~IISnAS--~~~ 242 (248)
||+++||+++|+|||+||||.|+++|+++.||++||||||||+|++ |+|||||||||++|+++ ++|||||| +||
T Consensus 79 dp~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViIsaps~--d~p~vV~gVN~~~~~~~-~~IISnasCTTn~ 154 (332)
T 3pym_A 79 DPANLPWGSSNVDIAIDSTGVFKELDTAQKHIDAGAKKVVITAPSS--TAPMFVMGVNEEKYTSD-LKIVSNASCTTNC 154 (332)
T ss_dssp SGGGSCTTTTTCSEEEECSSSSCSHHHHHHHHHTTCSEEEESSCCS--SSCBCCTTTTGGGCCTT-CCEEECCCHHHHH
T ss_pred ccccCCccccCccEEEEecccccCHHHHHHHHHcCCCEEEECCCCC--CCCeEeeccchhhcCcc-ccEEecCcchhhh
Confidence 9999999999999999999999999999999999999999999997 46999999999999987 89999999 887
No 5
>3v1y_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosol; rossmann fold; HET: NAD; 1.86A {Oryza sativa japonica group} PDB: 3e5r_O* 3e6a_O
Probab=100.00 E-value=1.5e-55 Score=410.05 Aligned_cols=152 Identities=42% Similarity=0.712 Sum_probs=144.2
Q ss_pred eeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeCC-CChhhhhhhccccCcCcccCc-eEEEecCCcEEECCeEEEEEe
Q 025793 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS-GGVKNASHLLKYDSLLGTFKA-DVKIVDNETISVDGKLIKVVS 163 (248)
Q Consensus 86 ~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND~-~~~e~~ayLLkYDStHGkf~g-~V~v~e~~~L~inGk~I~v~~ 163 (248)
++||||||||||||+++|+++++ +++++|+|||+ .|+++++||||||||||+|++ +|+++++++|++||++|+|++
T Consensus 3 ~~kv~INGfGrIGr~v~R~~~~~--~~~~ivaiNd~~~d~~~~a~l~kyDS~hG~f~~~~v~~~~~~~l~i~Gk~I~v~~ 80 (337)
T 3v1y_O 3 KIKIGINGFGRIGRLVARVALQS--EDVELVAVNDPFITTDYMTYMFKYDTVHGQWKHSDIKIKDSKTLLLGEKPVTVFG 80 (337)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTC--SSEEEEEEECTTSCHHHHHHHHHCCTTTCCCCSSCEEEEETTEEEETTEEEEEEC
T ss_pred ceEEEEECCChHHHHHHHHHHhC--CCcEEEEEeCCCCCHHHHHHHhhhccCCCcccCceEEEcCCcEEEECCEEEEEEE
Confidence 48999999999999999999985 47999999999 899999999999999999999 999854339999999999999
Q ss_pred cCCCCCCCCCCCcccEEecCcccccCchhhhHHHHcCCCEEEEcCCCCCCCCCeEEeecCCCCCCCCCCeEEeecC--Cc
Q 025793 164 NRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVRSWM--KN 241 (248)
Q Consensus 164 ~~dP~~i~W~~~GidiVVE~TG~F~~~e~a~~HL~~GAKKVIISAPsk~~D~ptiV~GVN~~~y~~~~~~IISnAS--~~ 241 (248)
++||+++||+++|+|||+||||.|+++++++.||++||||||||+|++ |+|||||||||++|+++ ++|||||| +|
T Consensus 81 e~dp~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViIsaps~--d~p~vV~gVN~~~~~~~-~~IISnasCTTn 157 (337)
T 3v1y_O 81 IRNPDEIPWAEAGAEYVVESTGVFTDKEKAAAHLKGGAKKVVISAPSK--DAPMFVCGVNEDKYTSD-IDIVSNASCTTN 157 (337)
T ss_dssp CSSGGGCCHHHHTCCEEEECSSSCCSHHHHTHHHHTTCCEEEESSCCS--SSCBCCTTTTGGGCCTT-CCEEECCCHHHH
T ss_pred ecCcccCCccccCCcEEEEeccccCCHHHHHHHHHcCCCEEEECCCCC--CCCeECCCCCHHHcCCC-CcEEecCchhhh
Confidence 999999999999999999999999999999999999999999999997 57999999999999987 89999999 88
Q ss_pred c
Q 025793 242 W 242 (248)
Q Consensus 242 ~ 242 (248)
|
T Consensus 158 ~ 158 (337)
T 3v1y_O 158 C 158 (337)
T ss_dssp H
T ss_pred h
Confidence 7
No 6
>3ids_C GAPDH, glyceraldehyde-3-phosphate dehydrogenase, glycoso; irreversible inhibitor, protein-ligand complex,X-RAY, glycol NAD, oxireductase; HET: NAD; 1.80A {Trypanosoma cruzi} PDB: 1ml3_A* 1qxs_C* 3dmt_A* 1k3t_A* 2x0n_A* 1gga_O* 1i32_A* 1a7k_A* 1i33_A* 1gyp_A* 1gyq_A*
Probab=100.00 E-value=1e-55 Score=413.99 Aligned_cols=155 Identities=39% Similarity=0.662 Sum_probs=145.8
Q ss_pred ceeeEEEeCCChhhHHHHHH----HhhCCCCCeEEEEEeCC-CChhhhhhhccccCcCcccCceEEEe-------cCCcE
Q 025793 85 AKLKVAINGFGRIGRNFLRC----WHGRKDSPLDVVVVNDS-GGVKNASHLLKYDSLLGTFKADVKIV-------DNETI 152 (248)
Q Consensus 85 ~~vkV~INGFGRIGRlvlR~----~~~~~~~~l~iVaIND~-~~~e~~ayLLkYDStHGkf~g~V~v~-------e~~~L 152 (248)
|++||||||||||||+++|+ ++++ .++++|+|||| .|+++++||||||||||+|+++|+++ ++++|
T Consensus 1 m~~kv~INGFGrIGr~v~Ra~~~~~~~~--~~~~vvaINd~~~d~~~~a~llkyDS~hG~f~~~v~~~~~~~~~~~~~~l 78 (359)
T 3ids_C 1 MPIKVGINGFGRIGRMVFQALCEDGLLG--TEIDVVAVVDMNTDAEYFAYQMRYDTVHGKFKYEVTTTKSSPSVAKDDTL 78 (359)
T ss_dssp CCEEEEEECTTHHHHHHHHHHHHTTCBT--TTEEEEEEECSSCCHHHHHHHHHEETTTEECSSCEEEECSCTTSSSCCEE
T ss_pred CceEEEEECCChHHHHHHHHhHHHHhcC--CCcEEEEEecCCCCHHHHHHHhcccCCCCCEeeEEEecccccccCCCCEE
Confidence 57899999999999999999 6654 47999999996 89999999999999999999999983 68899
Q ss_pred EECCeEEEEEe-cCCCCCCCCCCCcccEEecCcccccCchhhhHHHHcCCCEEEEcCCCCCCCCCeEEeecCCCCCCC-C
Q 025793 153 SVDGKLIKVVS-NRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDH-E 230 (248)
Q Consensus 153 ~inGk~I~v~~-~~dP~~i~W~~~GidiVVE~TG~F~~~e~a~~HL~~GAKKVIISAPsk~~D~ptiV~GVN~~~y~~-~ 230 (248)
++||++|+|++ ++||+++||+++|+|||+||||.|+++++++.||++||||||||||+++ |+|||||||||++|++ .
T Consensus 79 ~inGk~I~v~~~e~dp~~i~w~~~gvDiVlesTG~f~s~e~A~~hl~aGAkkViISaps~~-d~p~vV~gVN~~~~~~~~ 157 (359)
T 3ids_C 79 VVNGHRILCVKAQRNPADLPWGKLGVEYVIESTGLFTAKAAAEGHLRGGARKVVISAPASG-GAKTLVMGVNHHEYNPSE 157 (359)
T ss_dssp EETTEEEEECCCCSSTTTSCHHHHTCCEEEECSSSCCBHHHHTHHHHTTCCEEEESSCCBS-SCEECCTTTTGGGCCTTT
T ss_pred EECCEEEEEEEccCCcccCCccccCccEEEEeccccCCHHHHHHHHHcCCCEEEECCCCCC-CCCeEEeccCHHHcCCCC
Confidence 99999999999 9999999999999999999999999999999999999999999999985 7899999999999998 6
Q ss_pred CCeEEeecC--Cccc
Q 025793 231 VANIVRSWM--KNWG 243 (248)
Q Consensus 231 ~~~IISnAS--~~~~ 243 (248)
++|||||| +||=
T Consensus 158 -~~IISNaSCTTn~L 171 (359)
T 3ids_C 158 -HHVVSNASCTTNCL 171 (359)
T ss_dssp -CSEEECCCHHHHHH
T ss_pred -CCEEECCchHhhhH
Confidence 89999999 8883
No 7
>3h9e_O Glyceraldehyde-3-phosphate dehydrogenase, testis-; oxidoreductase, structural genomics, structural genomics CON SGC, glycolysis, NAD; HET: NAD; 1.72A {Homo sapiens} PDB: 3pfw_O* 2vyn_D* 2vyv_D*
Probab=100.00 E-value=3.3e-54 Score=402.17 Aligned_cols=151 Identities=42% Similarity=0.692 Sum_probs=144.2
Q ss_pred ceeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeCC-CChhhhhhhccccCcCcccCceEEEecCCcEEECCeEEEEEe
Q 025793 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS-GGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVS 163 (248)
Q Consensus 85 ~~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND~-~~~e~~ayLLkYDStHGkf~g~V~v~e~~~L~inGk~I~v~~ 163 (248)
.++||||||||||||+++|+++++ . ++||+|||+ .++++++||||||||||+|+++|++ ++++|++||++|+|++
T Consensus 6 ~~~kvgInGFGRIGrlv~R~~~~~--~-veivainDp~~d~~~~a~l~~yDS~hG~f~~~v~~-~~~~l~i~Gk~I~v~~ 81 (346)
T 3h9e_O 6 RELTVGINGFGRIGRLVLRACMEK--G-VKVVAVNDPFIDPEYMVYMFKYDSTHGRYKGSVEF-RNGQLVVDNHEISVYQ 81 (346)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT--T-CEEEEEECTTCCHHHHHHHHHCCTTTCSCSSCEEE-ETTEEEETTEEEEEEC
T ss_pred CeeEEEEECCChHHHHHHHHHHhC--C-CEEEEEeCCCCChhHhcccccccCCCCCCCCcEEE-cCCEEEECCEEEEEEe
Confidence 458999999999999999999986 2 999999998 8999999999999999999999998 5889999999999999
Q ss_pred cCCCCCCCCCCCcccEEecCcccccCchhhhHHHHcCCCEEEEcCCCCCCCCCeEEeecCCCCCCC-CCCeEEeecC--C
Q 025793 164 NRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDH-EVANIVRSWM--K 240 (248)
Q Consensus 164 ~~dP~~i~W~~~GidiVVE~TG~F~~~e~a~~HL~~GAKKVIISAPsk~~D~ptiV~GVN~~~y~~-~~~~IISnAS--~ 240 (248)
++||+++||+++|+|||+||||.|++++.++.||++||||||||+|++ |+|||||||||++|++ + ++|||||| +
T Consensus 82 e~dp~~i~W~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkVVIsaps~--d~plvV~gVN~~~~~~~~-~~IISNasCTT 158 (346)
T 3h9e_O 82 CKEPKQIPWRAVGSPYVVESTGVYLSIQAASDHISAGAQRVVISAPSP--DAPMFVMGVNENDYNPGS-MNIVSNASCTT 158 (346)
T ss_dssp CSSGGGCCGGGGTSCEEEECSSSCCSHHHHHHHHHTTCSEEEESSCCS--SSCBCCTTTTGGGCCTTT-CSEEECCCHHH
T ss_pred cCChhhCCcccccccEEEEeccccCCHHHHHHHHHcCCCEEEECCCCC--CCCeeCcccCHHHcCccc-CCEEECCcchh
Confidence 999999999999999999999999999999999999999999999996 5899999999999997 6 89999999 8
Q ss_pred cc
Q 025793 241 NW 242 (248)
Q Consensus 241 ~~ 242 (248)
||
T Consensus 159 n~ 160 (346)
T 3h9e_O 159 NC 160 (346)
T ss_dssp HH
T ss_pred hh
Confidence 87
No 8
>3hja_A GAPDH, glyceraldehyde-3-phosphate dehydrogenase; niaid, ssgcid, decode, UW, SBRI, LYME disease, non-hodgkin lymphomas, cytoplasm; HET: NAD; 2.20A {Borrelia burgdorferi B31}
Probab=100.00 E-value=2.2e-53 Score=397.83 Aligned_cols=152 Identities=48% Similarity=0.792 Sum_probs=144.9
Q ss_pred ceeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeCCCChhhhhhhccccCcCcccCceEEEecCCcEEECCeEEEEEec
Q 025793 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (248)
Q Consensus 85 ~~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND~~~~e~~ayLLkYDStHGkf~g~V~v~e~~~L~inGk~I~v~~~ 164 (248)
|++||||||||||||+++|+++++ +++||+|||+.|+++++||||||||||+|+++++. ++++|++||++|+|+++
T Consensus 20 ~~~kVaInGfGrIGr~vlr~l~e~---~~~ivaIndl~d~~~~a~llkydS~hG~f~~~v~~-~~~~l~i~Gk~I~v~~~ 95 (356)
T 3hja_A 20 GSMKLAINGFGRIGRNVFKIAFER---GIDIVAINDLTDPKTLAHLLKYDSTFGVYNKKVES-RDGAIVVDGREIKIIAE 95 (356)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHT---TCEEEEEECSSCHHHHHHHHHEETTTEECSSCEEE-ETTEEEETTEEEEEECC
T ss_pred CCeEEEEECCCHHHHHHHHHHHHC---CCCEEEEeCCCCHHHhhhhhccccCCCCCCCCEEE-cCCEEEECCEEEEEEEc
Confidence 569999999999999999999986 69999999999999999999999999999999998 57899999999999999
Q ss_pred CCCCCCCCCCCcccEEecCcccccC----chhhhHHHH-cCCCEEEEcCCCCCCCCCeEEeecCCCCCCCCCCeEEeecC
Q 025793 165 RDPLQLPWAELGIDIVIEGTGVFVD----GPGAGKHIQ-AGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVRSWM 239 (248)
Q Consensus 165 ~dP~~i~W~~~GidiVVE~TG~F~~----~e~a~~HL~-~GAKKVIISAPsk~~D~ptiV~GVN~~~y~~~~~~IISnAS 239 (248)
+||+++||+++|+|||+||||.|++ +++++.||+ +||||||||+|+++ ++|||||||||++|+++ ++||||||
T Consensus 96 ~dp~~i~w~~~gvDiV~esTG~f~s~~~~~e~a~~hl~~aGAkkVVIsaps~d-~vp~vV~gVN~~~~~~~-~~IISNaS 173 (356)
T 3hja_A 96 RDPKNLPWAKLGIDVVIESTGVFSSATSDKGGYLDHVNHAGAKKVILTVPAKD-EIKTIVLGVNDHDINSD-LKAVSNAS 173 (356)
T ss_dssp SSGGGCCHHHHTCSEEEECSSSCCSSCCTTCCGGGGTTTSCCSEEEESSCCSS-CCEECCTTTSGGGCCTT-CCEEECCC
T ss_pred CChhhCCccccCCCEEEEecccccccchhHHHHHHHHHhCCCeEEEECCCCCC-CCCEEeccCCHHHcCcC-ccEEECCc
Confidence 9999999999999999999999999 999999999 99999999999986 78999999999999987 79999999
Q ss_pred --Ccc
Q 025793 240 --KNW 242 (248)
Q Consensus 240 --~~~ 242 (248)
+||
T Consensus 174 CTTn~ 178 (356)
T 3hja_A 174 CTTNC 178 (356)
T ss_dssp HHHHH
T ss_pred cchhh
Confidence 887
No 9
>1obf_O Glyceraldehyde 3-phosphate dehydrogenase; glycolytic pathway, oxidoreductase, free-NAD GAPDH; HET: PG4; 1.7A {Achromobacter xylosoxidans} SCOP: c.2.1.3 d.81.1.1 PDB: 3gnq_A*
Probab=100.00 E-value=1.1e-49 Score=370.15 Aligned_cols=153 Identities=41% Similarity=0.717 Sum_probs=144.7
Q ss_pred eeEEEeCCChhhHHHHHHHhhCC-CCCeEEEEEeCCCChhhhhhhccccCcCcccCceEEEecCCcEEECCeEEEEEecC
Q 025793 87 LKVAINGFGRIGRNFLRCWHGRK-DSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNR 165 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~~-~~~l~iVaIND~~~~e~~ayLLkYDStHGkf~g~V~v~e~~~L~inGk~I~v~~~~ 165 (248)
+||||||||||||+++|+++++. .+++++|+|||+.++++++|||||||+||+|+++|++ +++.|.+||++|+|++++
T Consensus 2 ikVaInGfGrIGr~v~r~l~~~~~~~~~evvaInd~~~~~~~a~ll~ydS~hg~f~~~v~~-~~~~l~v~g~~i~v~~~~ 80 (335)
T 1obf_O 2 IRVAINGYGRIGRNILRAHYEGGKSHDIEIVAINDLGDPKTNAHLTRYDTAHGKFPGTVSV-NGSYMVVNGDKIRVDANR 80 (335)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTSCSSEEEEEEECSSCHHHHHHHHHEETTTEECSSCEEE-ETTEEEETTEEEEEECCS
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCCcEEEEEeCCCCHHHHHHHhccCCcCCCCCCCEEE-eCCEEEECCEEEEEEEcC
Confidence 69999999999999999999862 2479999999999999999999999999999999998 588999999999999999
Q ss_pred CCCCCCCCCCcccEEecCcccccCchhhhHHHHcCCCEEEEcCCCCCCCCC-eEEeecCCCCCCCCCCeEEeecC--Ccc
Q 025793 166 DPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIP-TYVVGVNEKDYDHEVANIVRSWM--KNW 242 (248)
Q Consensus 166 dP~~i~W~~~GidiVVE~TG~F~~~e~a~~HL~~GAKKVIISAPsk~~D~p-tiV~GVN~~~y~~~~~~IISnAS--~~~ 242 (248)
||+++||+++|+|||+||||.|++++.+..|+++||||||||+|+++ |.| ||||||||++|++. ++|||||| +||
T Consensus 81 dp~~~~w~~~gvDiV~estG~f~s~e~a~~h~~aGakkVviSaps~~-dvp~~vV~gVN~~~~~~~-~~IISNasCTTn~ 158 (335)
T 1obf_O 81 NPAQLPWGALKVDVVLECTGFFTTKEKAGAHIKGGAKKVIISAPGGA-DVDATVVYGVNHGTLKST-DTVISNASCTTNC 158 (335)
T ss_dssp CGGGSCTTTTTCSEEEECSSSCCSHHHHHHHHHHTCSEEEESSCCCT-TSSEECCTTTSGGGCCTT-CCEEECCCHHHHH
T ss_pred CcccCCccccCCCEEEEccCccccHHHHHHHHHcCCCEEEECCcccC-CCCceEEccCCHHHhCcC-ccEEeCCcHHHHH
Confidence 99999999999999999999999999999999999999999999974 689 99999999999986 89999999 887
No 10
>2b4r_O Glyceraldehyde-3-phosphate dehydrogenase; SGPP, structural genomics, PSI, structural genomi pathogenic protozoa consortium; HET: NAD AES; 2.25A {Plasmodium falciparum} SCOP: c.2.1.3 d.81.1.1 PDB: 2b4t_O* 1ywg_O*
Probab=100.00 E-value=9.7e-50 Score=371.95 Aligned_cols=153 Identities=41% Similarity=0.705 Sum_probs=144.6
Q ss_pred ceeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeCC-CChhhhhhhccccCcCcccCceEEEecCCcEEECCeEEEEEe
Q 025793 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS-GGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVS 163 (248)
Q Consensus 85 ~~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND~-~~~e~~ayLLkYDStHGkf~g~V~v~e~~~L~inGk~I~v~~ 163 (248)
..+||||||||||||+++|+++++ +++++|+|||| .++++++|||||||+||+|+++|++ +++.|.+||++|+|++
T Consensus 10 ~~~kv~INGfGrIGr~v~ra~~~~--~~~evvaInd~~~~~~~~a~l~~yDS~hg~~~~~v~~-~~~~l~v~Gk~i~v~~ 86 (345)
T 2b4r_O 10 AATKLGINGFGRIGRLVFRAAFGR--KDIEVVAINDPFMDLNHLCYLLKYDSVHGQFPCEVTH-ADGFLLIGEKKVSVFA 86 (345)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHTC--SSEEEEEEECTTCCHHHHHHHHHCCTTTCSCSSCEEE-ETTEEEESSCEEEEEC
T ss_pred hheEEEEeCCchHHHHHHHHHhhC--CCcEEEEEcCCCCChHHHHHHhccCCCCCcCCCCEEE-cCCEEEECCEEEEEEE
Confidence 368999999999999999999976 57999999994 8999999999999999999999998 5889999999999999
Q ss_pred cCCCCCCCCCCCcccEEecCcccccCchhhhHHHHcCCCEEEEcCCCCCCCCCeEEeecCCCCCCCCCCeEEeecC--Cc
Q 025793 164 NRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVRSWM--KN 241 (248)
Q Consensus 164 ~~dP~~i~W~~~GidiVVE~TG~F~~~e~a~~HL~~GAKKVIISAPsk~~D~ptiV~GVN~~~y~~~~~~IISnAS--~~ 241 (248)
++||+++||+++|+|||+||||.|++++.+..|+++||||||||+|+++ |.||||||||++.|++. ++|||||| +|
T Consensus 87 ~~dp~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVVIsaps~~-dvplvV~gVN~~~~~~~-~~IISNasCTTn 164 (345)
T 2b4r_O 87 EKDPSQIPWGKCQVDVVCESTGVFLTKELASSHLKGGAKKVIMSAPPKD-DTPIYVMGINHHQYDTK-QLIVSNASCTTN 164 (345)
T ss_dssp CSSGGGCCHHHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCCSS-SCCBCCTTTTGGGCCTT-CCEEECCCHHHH
T ss_pred cCCcccCcccccCCCEEEECcCccccHhhHHHHHHCCCCEEEECCCCCC-CCCEEEecCCHHHhCCC-CCEEECCchHHH
Confidence 9999999999999999999999999999999999999999999999985 68999999999999986 89999999 88
Q ss_pred c
Q 025793 242 W 242 (248)
Q Consensus 242 ~ 242 (248)
|
T Consensus 165 ~ 165 (345)
T 2b4r_O 165 C 165 (345)
T ss_dssp H
T ss_pred H
Confidence 7
No 11
>2ep7_A GAPDH, glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase, structural genomics, NPPSFA; HET: NAD; 2.30A {Aquifex aeolicus}
Probab=100.00 E-value=2.9e-49 Score=368.34 Aligned_cols=153 Identities=52% Similarity=0.862 Sum_probs=143.3
Q ss_pred ceeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeCCCChhhhhhhccccCcCcccCceEEEecCCcEEECCeEEEEEec
Q 025793 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (248)
Q Consensus 85 ~~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND~~~~e~~ayLLkYDStHGkf~g~V~v~e~~~L~inGk~I~v~~~ 164 (248)
|++||||||||||||+++|+++++ +++++|+|||..++++++|||||||+||+|+++|++ +++.|.+||++|+|+++
T Consensus 1 m~ikV~InGfGrIGr~v~r~l~~~--~~~evvaInd~~~~~~~a~ll~yDs~hG~~~~~v~~-~~~~l~v~Gk~i~v~~~ 77 (342)
T 2ep7_A 1 MAIKVGINGFGRIGRSFFRASWGR--EEIEIVAINDLTDAKHLAHLLKYDSVHGIFKGSVEA-KDDSIVVDGKEIKVFAQ 77 (342)
T ss_dssp --CEEEEECCSHHHHHHHHHHTTC--TTCEEEEEECSSCHHHHHHHHHEETTTEECSSCEEE-CSSEEEETTEEEEEECC
T ss_pred CceEEEEECCCHHHHHHHHHHHhC--CCceEEEEecCCChHHHhhhhhcccccccCCCcEEE-cCCEEEECCEEEEEEEc
Confidence 457999999999999999999875 579999999998999999999999999999999998 58899999999999999
Q ss_pred CCCCCCCCCCCcccEEecCcccccCchhhhHHHHcCCCEEEEcCCCCCCCCC-eEEeecCCCCCCCCCCeEEeecC--Cc
Q 025793 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIP-TYVVGVNEKDYDHEVANIVRSWM--KN 241 (248)
Q Consensus 165 ~dP~~i~W~~~GidiVVE~TG~F~~~e~a~~HL~~GAKKVIISAPsk~~D~p-tiV~GVN~~~y~~~~~~IISnAS--~~ 241 (248)
+||+++||+++|+|||+||||.|++++.+..|+++||||||||+|++ |.| ||||||||+.|++..++|||||| +|
T Consensus 78 ~dp~~~~w~~~gvDiV~estG~~~s~e~a~~hl~aGakkVvisaps~--dvp~~vV~gVN~~~~~~~~~~IISNasCTTn 155 (342)
T 2ep7_A 78 KDPSQIPWGDLGVDVVIEATGVFRDRENASKHLQGGAKKVIITAPAK--NPDITVVLGVNEEKYNPKEHNIISNASCTTN 155 (342)
T ss_dssp SSGGGCCHHHHTCSEEEECSSSCCBHHHHTTTGGGTCSEEEESSCCB--SCSEECCTTTSGGGCCTTTCCEEECCCHHHH
T ss_pred CChhhCCccccCCCEEEECCCchhhhhhhHHHHhcCCCEEEecCCCC--CCCceEEcCcCHHHhcccCCeEEECCChHHH
Confidence 99999999999999999999999999999999999999999999997 589 99999999999973278999999 88
Q ss_pred c
Q 025793 242 W 242 (248)
Q Consensus 242 ~ 242 (248)
|
T Consensus 156 ~ 156 (342)
T 2ep7_A 156 C 156 (342)
T ss_dssp H
T ss_pred H
Confidence 7
No 12
>2d2i_A Glyceraldehyde 3-phosphate dehydrogenase; rossmann fold, protein-NADP+ complex, oxidoreductase; HET: NAP; 2.50A {Synechococcus SP} PDB: 2duu_A
Probab=100.00 E-value=1.6e-45 Score=347.03 Aligned_cols=156 Identities=55% Similarity=0.993 Sum_probs=145.0
Q ss_pred ceeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeCCCChhhhhhhccccCcCcccCceEEEecCCcEEECCeEEEEEec
Q 025793 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (248)
Q Consensus 85 ~~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND~~~~e~~ayLLkYDStHGkf~g~V~v~e~~~L~inGk~I~v~~~ 164 (248)
|++||||||||||||+++|+++++..+++++|+|||..++++++|||+|||+||+|.++|++ +++.|.+||+.|+++++
T Consensus 1 M~ikVgInGfGrIGr~vlR~l~~~~~~~veIVaInd~~d~~~~a~ll~yds~~G~~~~~v~~-~~~~l~v~g~~i~v~~~ 79 (380)
T 2d2i_A 1 MTIRVAINGFGRIGRNFLRCWFGRQNTDLEVVAINNTSDARTAAHLLEYDSVLGRFNADISY-DENSITVNGKTMKIVCD 79 (380)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHCSSCSEEEEEEECSSCHHHHHHHHHCCTTTCCCCSCEEE-ETTEEEETTEEEEEECC
T ss_pred CCcEEEEECcCHHHHHHHHHHhcCCCCCEEEEEEecCCCHHHHHHhhcccccCCCCCCcEEE-eCCeEEECCeEEEEEec
Confidence 45799999999999999999988632579999999999999999999999999999999998 57889999999999999
Q ss_pred CCCCCCCCCCCcccEEecCcccccCchhhhHHHHcCCCEEEEcCCCCCCCCC-eEEeecCCCCCCCCCCeEEeecC--Cc
Q 025793 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIP-TYVVGVNEKDYDHEVANIVRSWM--KN 241 (248)
Q Consensus 165 ~dP~~i~W~~~GidiVVE~TG~F~~~e~a~~HL~~GAKKVIISAPsk~~D~p-tiV~GVN~~~y~~~~~~IISnAS--~~ 241 (248)
+||++++|++.|+|||+||||.|++++.+..||++|+|||||++|+++ +.| ||||||||++|++..++|||||| +|
T Consensus 80 ~dp~~l~w~~~gvDvV~e~TG~f~s~e~a~~hl~aGakkVVIs~ps~d-~~p~~~V~GVN~e~~~~~~~~IVSNasCtTn 158 (380)
T 2d2i_A 80 RNPLNLPWKEWDIDLVIESTGVFVTAEGASKHIQAGAKKVLITAPGKA-EGVGTYVIGVNDSEYRHEDFAVISNASCTTN 158 (380)
T ss_dssp SCGGGCCHHHHTCCEEEECSSSCCBHHHHHHHHHTTCSEEEESSCCBS-SSCEECCTTTTGGGCCTTTCSEEECCCHHHH
T ss_pred CChHHCCcccCCCCEEEECCCccccHHHHHHHHHcCCcEEEEcCCCCC-CCCceEEcccCHHHhcccCCcEEECCchHHH
Confidence 999999999999999999999999999999999999999999999974 578 99999999999973368999999 88
Q ss_pred c
Q 025793 242 W 242 (248)
Q Consensus 242 ~ 242 (248)
|
T Consensus 159 ~ 159 (380)
T 2d2i_A 159 C 159 (380)
T ss_dssp H
T ss_pred H
Confidence 7
No 13
>2g82_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; G3PDH, glycolysis, oxidoreductase, NAD, rossmann fold; HET: NAD PGE; 1.65A {Thermus aquaticus} SCOP: c.2.1.3 d.81.1.1 PDB: 1cer_O* 1vc2_A*
Probab=100.00 E-value=2.2e-45 Score=340.08 Aligned_cols=151 Identities=48% Similarity=0.781 Sum_probs=142.2
Q ss_pred eeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeCCCChhhhhhhccccCcCcccCceEEEecCCcEEECCeEEEEEecCC
Q 025793 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRD 166 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND~~~~e~~ayLLkYDStHGkf~g~V~v~e~~~L~inGk~I~v~~~~d 166 (248)
+||||||||||||+++|+++++ ++++|+|||..++++++|||+|||+||+|.++|+. +++.|.+||+.|++++++|
T Consensus 1 ikVgInG~G~IGr~vlr~l~~~---~~evvaind~~~~~~~a~ll~~ds~~G~~~~~v~~-~~~~l~v~g~~i~v~~~~d 76 (331)
T 2g82_O 1 MKVGINGFGRIGRQVFRILHSR---GVEVALINDLTDNKTLAHLLKYDSIYHRFPGEVAY-DDQYLYVDGKAIRATAVKD 76 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH---TCCEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEE-CSSEEEETTEEEEEECCSS
T ss_pred CEEEEECcCHHHHHHHHHHHhC---CCEEEEEecCCCHHHHhHhhhccccCCCCCceEEE-cCCEEEECCEEEEEEecCC
Confidence 4899999999999999999876 69999999999999999999999999999999997 5788999999999999999
Q ss_pred CCCCCCCCCcccEEecCcccccCchhhhHHHHcCCCEEEEcCCCCCCCCCeEEeecCCCCCCCCCCeEEeecC--Ccc
Q 025793 167 PLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVRSWM--KNW 242 (248)
Q Consensus 167 P~~i~W~~~GidiVVE~TG~F~~~e~a~~HL~~GAKKVIISAPsk~~D~ptiV~GVN~~~y~~~~~~IISnAS--~~~ 242 (248)
|++++|+++|+|+|+||||.|++++.+..|+++|||||||++|+++ +.||||||||+++|+++.++|||||| +||
T Consensus 77 p~~l~w~~~gvDiV~estG~~~s~e~a~~~l~aGakkvVIsaps~d-~~p~vV~gVN~~~~~~~~~~IIsnasCtTn~ 153 (331)
T 2g82_O 77 PKEIPWAEAGVGVVIESTGVFTDADKAKAHLEGGAKKVIITAPAKG-EDITIVMGVNHEAYDPSRHHIISNASCTTNS 153 (331)
T ss_dssp GGGSCTTTTTEEEEEECSSSCCBHHHHTHHHHTTCSEEEESSCCBS-CSEECCTTTTGGGCCTTTCCEEECCCHHHHH
T ss_pred hhhCcccccCCCEEEECCCchhhHHHHHHHHHCCCCEEEECCCCcC-CCCEEeeccCHHHhCcCCCCEEECCChHHHH
Confidence 9999999999999999999999999999999999999999999984 57999999999999962168999999 887
No 14
>1rm4_O Glyceraldehyde 3-phosphate dehydrogenase A; rossmann fold, GAPDH-NADP complex, oxidoreductase; HET: NDP; 2.00A {Spinacia oleracea} SCOP: c.2.1.3 d.81.1.1 PDB: 1nbo_O* 2hki_A 2pkq_P* 1rm5_O* 1rm3_O* 2pkr_O* 1jn0_O* 3qv1_A* 3k2b_A* 3rvd_A* 2pkq_O*
Probab=100.00 E-value=9.7e-45 Score=336.64 Aligned_cols=155 Identities=75% Similarity=1.247 Sum_probs=145.0
Q ss_pred eeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeCCCChhhhhhhccccCcCcccCceEEEecCCcEEECCeEEEEEecC
Q 025793 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNR 165 (248)
Q Consensus 86 ~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND~~~~e~~ayLLkYDStHGkf~g~V~v~e~~~L~inGk~I~v~~~~ 165 (248)
++||||||||||||.++|+++++..+.+++|+|||..++++++|||+|||+||+|.++|...+++.|.+||+.|++++++
T Consensus 1 ~ikVgInG~G~IGr~llR~l~~~~~p~~eivaInd~~~~~~~a~ll~sds~~G~~~~~v~~~~~~~l~v~g~~i~v~~~~ 80 (337)
T 1rm4_O 1 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDTGGVKQASHLLKYDSILGTFDADVKTAGDSAISVDGKVIKVVSDR 80 (337)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTCSSCSEEEEEEECTTCHHHHHHHHHCCTTTCSCSSCEEECTTSEEEETTEEEEEECCS
T ss_pred CeEEEEECCCHHHHHHHHHHHhCCCCCeEEEEEEcCCCHHHHHHHhcccccCCCccceeEEecCCeEEECCeEEEEEecC
Confidence 37999999999999999999986436799999999999999999999999999999999943577899999999999999
Q ss_pred CCCCCCCCCCcccEEecCcccccCchhhhHHHHcCCCEEEEcCCCCCCCCCeEEeecCCCCCCCCCCeEEeecC--Ccc
Q 025793 166 DPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVRSWM--KNW 242 (248)
Q Consensus 166 dP~~i~W~~~GidiVVE~TG~F~~~e~a~~HL~~GAKKVIISAPsk~~D~ptiV~GVN~~~y~~~~~~IISnAS--~~~ 242 (248)
||+++||+++|+|+|+||||.|++++.+..||++|+|+|++|||.++ |.|||||||||++|++. ++|||||| +||
T Consensus 81 dp~~i~w~~~gvDiV~eatg~~~s~e~a~~~l~~Gak~V~iSap~r~-d~p~~V~GVN~~~~~~~-~~IIsNasCtTn~ 157 (337)
T 1rm4_O 81 NPVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLITAPGKG-DIPTYVVGVNEEGYTHA-DTIISNASCTTNC 157 (337)
T ss_dssp CGGGSCHHHHTCCEEEECSSSCCBHHHHHHHHHTTCSEEEESSCCBS-SCCBCCTTTTGGGCCTT-CSEEECCCHHHHH
T ss_pred ChhhCcccccCCCEEEECCCchhhHHHHHHHHHcCCEEEEECCcccC-CCCeEeecCCHHHhCCC-CeEEECCChHHHH
Confidence 99999999999999999999999999999999999999999999984 67999999999999976 79999999 887
No 15
>3b1j_A Glyceraldehyde 3-phosphate dehydrogenase (NADP+); alpha/beta fold, oxidoreductase-protein binding complex; HET: NAD; 2.20A {Synechococcus elongatus} PDB: 3b1k_A* 3b20_A*
Probab=100.00 E-value=2.2e-44 Score=334.00 Aligned_cols=156 Identities=56% Similarity=1.006 Sum_probs=145.1
Q ss_pred ceeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeCCCChhhhhhhccccCcCcccCceEEEecCCcEEECCeEEEEEec
Q 025793 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (248)
Q Consensus 85 ~~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND~~~~e~~ayLLkYDStHGkf~g~V~v~e~~~L~inGk~I~v~~~ 164 (248)
|++||||||||||||.++|+++++..+++++|+|||..++++++|||+|||+||+|.++|+. +++.|.+||+.|+++++
T Consensus 1 M~ikVgI~G~G~IGr~v~r~l~~~~~~~~evvaInd~~~~~~~~~l~~~ds~~G~~~~~v~~-~~~~l~v~g~~i~v~~~ 79 (339)
T 3b1j_A 1 MTIRVAINGFGRIGRNFLRCWFGRQNTDLEVVAINNTSDARTAAHLLEYDSVLGRFNADISY-DENSITVNGKTMKIVCD 79 (339)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHCSCCSEEEEEEECSSCHHHHHHHHHCCTTTCCCCSCEEE-ETTEEEETTEEEEEECC
T ss_pred CceEEEEECCCHHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHhccccccCCCCCcEEE-cCCeeeecCceEEEEec
Confidence 45799999999999999999988633579999999999999999999999999999999998 57889999999999999
Q ss_pred CCCCCCCCCCCcccEEecCcccccCchhhhHHHHcCCCEEEEcCCCCCCCCC-eEEeecCCCCCCCCCCeEEeecC--Cc
Q 025793 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIP-TYVVGVNEKDYDHEVANIVRSWM--KN 241 (248)
Q Consensus 165 ~dP~~i~W~~~GidiVVE~TG~F~~~e~a~~HL~~GAKKVIISAPsk~~D~p-tiV~GVN~~~y~~~~~~IISnAS--~~ 241 (248)
+||++++|++.|+|+|+||||.|++++.+..||++|+|||||++|+++ +.| +||||||++.|++..++|||||| +|
T Consensus 80 ~dp~~l~w~~~~vDvV~e~tg~~~s~e~a~~~l~~GakkVVId~~~~~-~~p~~~V~gVN~~~~~~~~~~IISnasCtTn 158 (339)
T 3b1j_A 80 RNPLNLPWKEWDIDLVIESTGVFVTAEGASKHIQAGAKKVLITAPGKG-EGVGTYVIGVNDSEYRHEDFAVISNASCTTN 158 (339)
T ss_dssp SCGGGSCTTTTTCCEEEECSSSCCBHHHHHHHHHTTCSEEEESSCCBS-SSCEECCTTTTGGGCCTTTCSEEECCCHHHH
T ss_pred CChHHCcccccCCCEEEECCCccccHHHHHHHHHcCCcEEEEeCCCCC-CCCeeEEcccCHHHhCcCCCeEEECCcchhh
Confidence 999999999999999999999999999999999999999999999974 578 99999999999974368999999 78
Q ss_pred c
Q 025793 242 W 242 (248)
Q Consensus 242 ~ 242 (248)
|
T Consensus 159 ~ 159 (339)
T 3b1j_A 159 C 159 (339)
T ss_dssp H
T ss_pred H
Confidence 7
No 16
>3cps_A Glyceraldehyde 3-phosphate dehydrogenase; GAPDH, glycolysis, malaria, structural genomics; HET: NAD; 1.90A {Cryptosporidium parvum iowa II} PDB: 1vsv_A* 1vsu_A* 3chz_A 3cie_A* 3cif_A* 3sth_A*
Probab=100.00 E-value=2.8e-43 Score=328.82 Aligned_cols=154 Identities=42% Similarity=0.725 Sum_probs=141.6
Q ss_pred ceeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeC-CCChhhhhhhccccCcCcccCceEEEecCCcEEECCeEEEEEe
Q 025793 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND-SGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVS 163 (248)
Q Consensus 85 ~~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND-~~~~e~~ayLLkYDStHGkf~g~V~v~e~~~L~inGk~I~v~~ 163 (248)
+++||||||||||||.++|+++++ +++++|+||| ..++++++|||+|||+||+|.++|++ +++.|.+||+.|++++
T Consensus 16 ~~ikVgI~G~G~iGr~llR~l~~~--p~veivaindp~~~~~~~a~ll~~ds~hg~~~~~v~~-~~~~l~v~g~~i~v~~ 92 (354)
T 3cps_A 16 FQGTLGINGFGRIGRLVLRACMER--NDITVVAINDPFMDVEYMAYLLKYDSVHGNFNGTVEV-SGKDLCINGKVVKVFQ 92 (354)
T ss_dssp --CEEEEECCSHHHHHHHHHHHTC--SSCEEEEEECTTSCHHHHHHHHHCCTTTCSCSSCEEE-CC-CEEETTEEEEEEC
T ss_pred cceEEEEECCCHHHHHHHHHHHcC--CCeEEEEecCCCCChhHhhhhhcccccCCCCCCcEEE-eCCEEEECCeEEEEEe
Confidence 458999999999999999999876 5799999999 58999999999999999999999998 5789999999999999
Q ss_pred cCCCCCCCCCCCcccEEecCcccccCchhhhHHHHcCCCEEEEcCCCCCCCCCeEEeecCCCCCCCCCCeEEeecC--Cc
Q 025793 164 NRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVRSWM--KN 241 (248)
Q Consensus 164 ~~dP~~i~W~~~GidiVVE~TG~F~~~e~a~~HL~~GAKKVIISAPsk~~D~ptiV~GVN~~~y~~~~~~IISnAS--~~ 241 (248)
++||++++|++.|+|+|+||||.|++++.+..||++|+|||||++|+++ +.||+|||||+++|++..++|||||| +|
T Consensus 93 ~~dp~~i~w~~~~vDvV~eatg~~~s~e~a~~~l~~GakkvVId~padd-~~p~~V~GVN~~~~~~~~~~IISNpsCtTn 171 (354)
T 3cps_A 93 AKDPAEIPWGASGAQIVCESTGVFTTEEKASLHLKGGAKKVIISAPPKD-NVPMYVMGVNNTEYDPSKFNVISNASCTTN 171 (354)
T ss_dssp CSCGGGCCHHHHTCCEEEECSSSCCSHHHHGGGGTTTCSEEEESSCCSS-CCCBCCTTTTGGGCCTTTCSEEECCCHHHH
T ss_pred cCChHHCCcccCCCCEEEECCCchhhHHHHHHHHHcCCcEEEEeCCCCC-CCCEEEeccCHHHhCcCCCcEEECCCcHHH
Confidence 9999999999999999999999999999999999999999999999974 57999999999999863268999999 88
Q ss_pred c
Q 025793 242 W 242 (248)
Q Consensus 242 ~ 242 (248)
|
T Consensus 172 ~ 172 (354)
T 3cps_A 172 C 172 (354)
T ss_dssp H
T ss_pred H
Confidence 7
No 17
>1gad_O D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehyde(D)-NAD+(A)); HET: NAD; 1.80A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1dc4_A* 1dc3_A 1dc6_A* 1dc5_A* 1s7c_A* 1gae_O* 2vyn_A* 2vyv_A*
Probab=100.00 E-value=4.6e-43 Score=323.84 Aligned_cols=150 Identities=43% Similarity=0.727 Sum_probs=142.2
Q ss_pred eeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeCCCChhhhhhhccccCcCcccCceEEEecCCcEEECCeEEEEEecCC
Q 025793 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRD 166 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND~~~~e~~ayLLkYDStHGkf~g~V~v~e~~~L~inGk~I~v~~~~d 166 (248)
+||||||||||||.++|+++++ ++++||+|||..+.++++|||+|||+||+|.++++. +++.|.+||+.|++++++|
T Consensus 2 ikVgI~G~G~iG~~l~R~l~~~--~~veiv~i~~~~~~~~~a~l~~~ds~~g~~~~~v~~-~~~~l~v~g~~i~v~~~~d 78 (330)
T 1gad_O 2 IKVGINGFGRIGRIVFRAAQKR--SDIEIVAINDLLDADYMAYMLKYDSTHGRFDGTVEV-KDGHLIVNGKKIRVTAERD 78 (330)
T ss_dssp EEEEEECCSHHHHHHHHHHHTC--SSEEEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEE-ETTEEEETTEEEEEECCSS
T ss_pred eEEEEECcCHHHHHHHHHHHcC--CCeEEEEEcCCCChhHHhHhhcccccCCCCCCeEEE-cCCEEEECCEEEEEEEcCC
Confidence 7999999999999999999876 579999999998999999999999999999999998 5788999999999999999
Q ss_pred CCCCCCCCCcccEEecCcccccCchhhhHHHHcCCCEEEEcCCCCCCCCCeEEeecCCCCCCCCCCeEEeecC--Ccc
Q 025793 167 PLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVRSWM--KNW 242 (248)
Q Consensus 167 P~~i~W~~~GidiVVE~TG~F~~~e~a~~HL~~GAKKVIISAPsk~~D~ptiV~GVN~~~y~~~~~~IISnAS--~~~ 242 (248)
|+++||++.|+|+|+||||.|++++.+..|+++|+|+|++|||.++ |.|++|||||++.|+ . ++|||||| +||
T Consensus 79 p~~i~w~~~~vDvVf~atg~~~s~e~a~~~l~~GakvVdlSa~~~~-~~p~~V~GvN~~~~~-~-~~iIsNpsCtt~~ 153 (330)
T 1gad_O 79 PANLKWDEVGVDVVAEATGLFLTDETARKHITAGAKKVVMTGPSKD-NTPMFVKGANFDKYA-G-QDIVSNASCTTNC 153 (330)
T ss_dssp GGGGCHHHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCCSS-SCCBCCTTTTGGGCC-S-CSEEECCCHHHHH
T ss_pred hhhCccccccCCEEEECCCccccHHHHHHHHHCCCEEEEECCCCCC-CCCeEeecCCHHHhC-C-CCEEEcCChHHHH
Confidence 9999999999999999999999999999999999999999999964 679999999999998 5 78999999 787
No 18
>3cmc_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; microspectrophotometry, reaction intermediate, dehydrogenase phosphate binding site; HET: G3H NAD; 1.77A {Bacillus stearothermophilus} SCOP: c.2.1.3 d.81.1.1 PDB: 2gd1_O 1gd1_O* 1npt_O* 1nqa_O* 1nqo_O* 1nq5_O* 2dbv_O* 1dbv_O* 3dbv_O* 4dbv_O*
Probab=100.00 E-value=8.1e-43 Score=322.87 Aligned_cols=152 Identities=46% Similarity=0.753 Sum_probs=142.5
Q ss_pred eeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeCCCChhhhhhhccccCcCcccCceEEEecCCcEEECCeEEEEEecCC
Q 025793 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRD 166 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND~~~~e~~ayLLkYDStHGkf~g~V~v~e~~~L~inGk~I~v~~~~d 166 (248)
+||||||||||||.++|+++++ +++++|+|||..++++++|||+|||+||+|.++|+. +++.|.+||+.|++++++|
T Consensus 2 ikVgI~G~G~iGr~l~R~l~~~--~~veivain~~~~~~~~~~ll~~ds~~G~~~~~v~~-~~~~l~v~g~~i~v~~~~d 78 (334)
T 3cmc_O 2 VKVGINGFGRIGRNVFRAALKN--PDIEVVAVNDLTDANTLAHLLKYDSVHGRLDAEVSV-NGNNLVVNGKEIIVKAERD 78 (334)
T ss_dssp EEEEEESCSHHHHHHHHHHTTC--TTEEEEEEECSSCHHHHHHHHHEETTTEECSSCEEE-ETTEEEETTEEEEEECCSS
T ss_pred eEEEEECCCHHHHHHHHHHhCC--CCeEEEEEeCCCCHHHHHHHhccCCcCCCcCceEEE-ccCcEEECCEEEEEEecCC
Confidence 7999999999999999999876 579999999998999999999999999999999998 5789999999999999999
Q ss_pred CCCCCCCCCcccEEecCcccccCchhhhHHHHcCCCEEEEcCCCCCCCCCeEEeecCCCCCCCCCCeEEeecC--Ccc
Q 025793 167 PLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVRSWM--KNW 242 (248)
Q Consensus 167 P~~i~W~~~GidiVVE~TG~F~~~e~a~~HL~~GAKKVIISAPsk~~D~ptiV~GVN~~~y~~~~~~IISnAS--~~~ 242 (248)
|+++||++.|+|+|+||||.|++++.+..|+++|+|||||++|+++ +.|++|+|||+++|+++.++|||||| +||
T Consensus 79 p~~i~w~~~~vDvV~~atg~~~s~e~a~~~l~~Gak~vVId~pa~d-~~p~~V~eVN~~~i~~~~~~IIsNpsCttn~ 155 (334)
T 3cmc_O 79 PENLAWGEIGVDIVVESTGRFTKREDAAKHLEAGAKKVIISAPAKN-EDITIVMGVNQDKYDPKAHHVISNASCTTNC 155 (334)
T ss_dssp GGGCCTGGGTCCEEEECSSSCCBHHHHTHHHHTTCSEEEESSCCBS-CSEECCTTTSGGGCCTTTCCEEECCCHHHHH
T ss_pred hhhcCcccCccCEEEECCCchhhHHHHHHHHHCCCCEEEEeCCCcc-CCCEeccccCHHHhCccCCeEEECCChHHHH
Confidence 9999999999999999999999999999999999999999999974 57999999999999862168999999 787
No 19
>1hdg_O Holo-D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehy(D)-NAD(A)); HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=100.00 E-value=1.9e-42 Score=320.14 Aligned_cols=152 Identities=49% Similarity=0.724 Sum_probs=142.5
Q ss_pred eeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeCCCChhhhhhhccccCcCcccCceEEEecCCcEEECCeEEEEEecCC
Q 025793 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRD 166 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND~~~~e~~ayLLkYDStHGkf~g~V~v~e~~~L~inGk~I~v~~~~d 166 (248)
+||||||||||||.++|+++++..+++++|+|||..++++++|||+|||+||+|.++|+. +++.|.+||+.|++++++|
T Consensus 1 ~kVgI~G~G~iGr~llR~l~~~~~p~~eivain~~~~~~~~~~ll~~ds~~g~~~~~v~~-~~~~l~v~g~~i~v~~~~d 79 (332)
T 1hdg_O 1 ARVAINGFGRIGRLVYRIIYERKNPDIEVVAINDLTDTKTLAHLLKYDSVHKKFPGKVEY-TENSLIVDGKEIKVFAEPD 79 (332)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCTTCEEEEEECSSCHHHHHHHHHCCTTTCCCSSCEEE-CSSEEEETTEEEEEECCSS
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCCCeEEEEEEcCCChHHhhhhccCcCcCCCcCCcEEE-cCCEEEECCeEEEEEecCC
Confidence 489999999999999999987622579999999998999999999999999999999998 5789999999999999999
Q ss_pred CCCCCCCCCcccEEecCcccccCchhhhHHHHcCCCEEEEcCCCCCCCCC-eEEeecCCCCCCCCCCeEEeecC--Ccc
Q 025793 167 PLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIP-TYVVGVNEKDYDHEVANIVRSWM--KNW 242 (248)
Q Consensus 167 P~~i~W~~~GidiVVE~TG~F~~~e~a~~HL~~GAKKVIISAPsk~~D~p-tiV~GVN~~~y~~~~~~IISnAS--~~~ 242 (248)
|++++|+++|+|+|+||||.|++++.+..|+++|+|||||++|++ |.| ++|||||+++|++. ++|||||| +||
T Consensus 80 p~~l~w~~~~vDvV~~atg~~~s~e~a~~~l~aGakkvVId~~a~--d~p~~~V~eVN~~~i~~~-~~iIsNpsCttn~ 155 (332)
T 1hdg_O 80 PSKLPWKDLGVDFVIESTGVFRNREKAELHLQAGAKKVIITAPAK--GEDITVVIGCNEDQLKPE-HTIISCASCTTNS 155 (332)
T ss_dssp GGGSCHHHHTCCEEEECSSSCCBHHHHTHHHHTTCSEEEESSCCB--SCSEECCTTTTGGGCCTT-CCEEECCCHHHHH
T ss_pred hHHCcccccCCCEEEECCccchhHHHHHHHHHcCCcEEEEeCCCC--CCCceEEeccCHHHhCCC-CcEEECCccHHHH
Confidence 999999999999999999999999999999999999999999996 578 99999999999875 78999999 787
No 20
>3e5r_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosolic; GAPDH, RICE, oxidoreductase, cytoplasm, glycolysis, NAD; HET: NAD; 2.30A {Oryza sativa subsp} PDB: 3e6a_O
Probab=100.00 E-value=4.2e-42 Score=317.96 Aligned_cols=153 Identities=42% Similarity=0.712 Sum_probs=142.6
Q ss_pred ceeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeCC-CChhhhhhhccccCcCcccC-ceEEEecCCcEEECCeEEEEE
Q 025793 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS-GGVKNASHLLKYDSLLGTFK-ADVKIVDNETISVDGKLIKVV 162 (248)
Q Consensus 85 ~~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND~-~~~e~~ayLLkYDStHGkf~-g~V~v~e~~~L~inGk~I~v~ 162 (248)
|++||||||||||||.++|++.++ +++++|+|||+ .++++++|||||||+||+|. ++++..+++.|.+||+.|+++
T Consensus 2 m~ikVgI~G~GrIGr~l~R~l~~~--p~vevvaI~d~~~~~~~~~~ll~yds~~g~~~~~~v~~~~~~~l~~~g~~i~v~ 79 (337)
T 3e5r_O 2 GKIKIGINGFGRIGRLVARVALQS--EDVELVAVNDPFITTDYMTYMFKYDTVHGQWKHSDIKIKDSKTLLLGEKPVTVF 79 (337)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHTC--SSEEEEEEECSSSCHHHHHHHHHCCTTTCCCCSSCEEESSSSEEEETTEEEEEE
T ss_pred CceEEEEECcCHHHHHHHHHHhCC--CCeEEEEEECCCCCHHHHHHhhcccccCCCCCCCcEEeecCCeeEECCeEEEEE
Confidence 458999999999999999999875 47999999996 89999999999999999999 999863467899999999999
Q ss_pred ecCCCCCCCCCCCcccEEecCcccccCchhhhHHHHcCCCEEEEcCCCCCCCCCeEEeecCCCCCCCCCCeEEeecC--C
Q 025793 163 SNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVRSWM--K 240 (248)
Q Consensus 163 ~~~dP~~i~W~~~GidiVVE~TG~F~~~e~a~~HL~~GAKKVIISAPsk~~D~ptiV~GVN~~~y~~~~~~IISnAS--~ 240 (248)
+++||+++||++.|+|+|+||||.|++++.+..||++|+|||||++|++ |.|++|||||+++|++. ++|||||| +
T Consensus 80 ~~~dp~~l~w~~~~vDvV~eaTg~~~~~e~a~~~l~aGak~VVIs~pa~--d~p~~V~gvN~~~~~~~-~~iIsnpsCtt 156 (337)
T 3e5r_O 80 GIRNPDEIPWAEAGAEYVVESTGVFTDKEKAAAHLKGGAKKVVISAPSK--DAPMFVCGVNEDKYTSD-IDIVSNASCTT 156 (337)
T ss_dssp CCSCGGGCCHHHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCCS--SSCBCCTTTTGGGCCTT-CCEEECCCHHH
T ss_pred ecCChHHccccccCCCEEEECCCchhhHHHHHHHHHcCCCEEEEecCCC--CCCEEEeccCHHHhCCC-CcEEECCChHH
Confidence 9999999999999999999999999999999999999999999999996 57999999999999975 78999999 8
Q ss_pred cc
Q 025793 241 NW 242 (248)
Q Consensus 241 ~~ 242 (248)
||
T Consensus 157 ~~ 158 (337)
T 3e5r_O 157 NC 158 (337)
T ss_dssp HH
T ss_pred HH
Confidence 87
No 21
>2x5j_O E4PDH, D-erythrose-4-phosphate dehydrogenase; oxidoreductase, hydride transfer, aldehyde dehydrogenase, PY biosynthesis; 2.30A {Escherichia coli} PDB: 2xf8_A* 2x5k_O*
Probab=100.00 E-value=7.6e-42 Score=316.72 Aligned_cols=153 Identities=39% Similarity=0.660 Sum_probs=142.3
Q ss_pred ceeeEEEeCCChhhHHHHHHHhh---CCCCCeEEEEEeCCCChhhhhhhccccCcCcccCceEEEecCCcEEECCeEEEE
Q 025793 85 AKLKVAINGFGRIGRNFLRCWHG---RKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKV 161 (248)
Q Consensus 85 ~~vkV~INGFGRIGRlvlR~~~~---~~~~~l~iVaIND~~~~e~~ayLLkYDStHGkf~g~V~v~e~~~L~inGk~I~v 161 (248)
|++||||||||||||.++|++.+ + +++++|+|||..++++++|||+|||+||+|.++|+. +++.|.+||+.|++
T Consensus 1 M~ikVgI~G~G~iGr~l~r~l~~~~~~--~~~eivai~~~~~~~~~~~ll~~ds~~g~~~~~v~~-~~~~l~v~g~~i~v 77 (339)
T 2x5j_O 1 MTVRVAINGFGRIGRNVVRALYESGRR--AEITVVAINELADAAGMAHLLKYDTSHGRFAWEVRQ-ERDQLFVGDDAIRV 77 (339)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHTSGG--GTEEEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEE-ETTEEEETTEEEEE
T ss_pred CCeEEEEECcCHHHHHHHHHHHcCCCC--CCEEEEEEeCCCCHHHHHHHhcccccCCCCCceEEE-cCCeeEECCEEEEE
Confidence 45799999999999999999987 5 479999999999999999999999999999999998 57889999999999
Q ss_pred EecCCCCCCCCCCCcccEEecCcccccCchhhhHHHHcCCCEEEEcCCCCCCCCC-eEEeecCCCCCCCCCCeEEeecC-
Q 025793 162 VSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIP-TYVVGVNEKDYDHEVANIVRSWM- 239 (248)
Q Consensus 162 ~~~~dP~~i~W~~~GidiVVE~TG~F~~~e~a~~HL~~GAKKVIISAPsk~~D~p-tiV~GVN~~~y~~~~~~IISnAS- 239 (248)
++++||++++|++.|+|+|+||||.|++++.+..||++|+|||||++|+.. |.| ++|||||++.|+++ ++||||||
T Consensus 78 ~~~~dp~~l~~~~~~vDvV~e~tg~~~s~e~a~~~l~~GakkVVId~~ad~-d~p~~~V~gvN~~~~~~~-~~iIsnpsC 155 (339)
T 2x5j_O 78 LHERSLQSLPWRELGVDVVLDCTGVYGSREHGEAHIAAGAKKVLFSHPGSN-DLDATVVYGVNQDQLRAE-HRIVSNASC 155 (339)
T ss_dssp ECCSSGGGCCHHHHTCSEEEECSSSCCSHHHHHHHHHTTCSEEEESSCCCT-TSSEECCTTTSGGGCCTT-CCEEECCCH
T ss_pred EecCChHHCcccccCCCEEEECCCccccHHHHHHHHHcCCCEEEEeccccC-CCCceeecccCHHHhcCC-CCEEECCCc
Confidence 999999999999899999999999999999999999999999999999832 578 99999999999975 68999999
Q ss_pred -Ccc
Q 025793 240 -KNW 242 (248)
Q Consensus 240 -~~~ 242 (248)
+||
T Consensus 156 ttn~ 159 (339)
T 2x5j_O 156 TTNC 159 (339)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 787
No 22
>1u8f_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase, liver; rossmann fold, oxidoreductase, mammalian GAPDH; HET: NAD; 1.75A {Homo sapiens} SCOP: c.2.1.3 d.81.1.1 PDB: 1znq_O* 1j0x_O* 3gpd_R* 1dss_G* 1crw_G* 1szj_G* 1ihx_A* 1ihy_A* 1gpd_G* 4gpd_1
Probab=100.00 E-value=1.3e-41 Score=313.84 Aligned_cols=152 Identities=39% Similarity=0.707 Sum_probs=142.1
Q ss_pred ceeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeCC-CChhhhhhhccccCcCcccCceEEEecCCcEEECCeEEEEEe
Q 025793 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS-GGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVS 163 (248)
Q Consensus 85 ~~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND~-~~~e~~ayLLkYDStHGkf~g~V~v~e~~~L~inGk~I~v~~ 163 (248)
|++||||||||||||.++|++.++ +++++|+|||+ .+.++++|||+|||+||+|.++++. +++.|.+||+.|++++
T Consensus 2 M~ikVgI~G~G~iGr~~~R~l~~~--~~vevvaI~d~~~~~~~~a~l~~~ds~~g~~~~~~~~-~~~~l~v~g~~i~v~~ 78 (335)
T 1u8f_O 2 GKVKVGVNGFGRIGRLVTRAAFNS--GKVDIVAINDPFIDLNYMVYMFQYDSTHGKFHGTVKA-ENGKLVINGNPITIFQ 78 (335)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHH--CSSEEEEEECSSSCHHHHHHHHHCCTTTCSCSSCEEE-ETTEEEETTEEEEEEC
T ss_pred CceEEEEEccCHHHHHHHHHHHcC--CCcEEEEecCCCCCHHHHHHHhhcccccCCCCCceEE-cCCeEEECCeEEEEEe
Confidence 458999999999999999999875 46999999996 8999999999999999999999998 5778999999999999
Q ss_pred cCCCCCCCCCCCcccEEecCcccccCchhhhHHHHcCCCEEEEcCCCCCCCCCeEEeecCCCCCCCCCCeEEeecC--Cc
Q 025793 164 NRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVRSWM--KN 241 (248)
Q Consensus 164 ~~dP~~i~W~~~GidiVVE~TG~F~~~e~a~~HL~~GAKKVIISAPsk~~D~ptiV~GVN~~~y~~~~~~IISnAS--~~ 241 (248)
++||++++|++.|+|+|+||||.|++.+.+.+||++|+|+|++|+|.+ |.|++|||||+++|++. ++||||+| +|
T Consensus 79 ~~d~~~l~~~~~~vDvV~eatg~~~~~e~a~~~l~aGak~V~iSap~~--~~p~~V~gvN~~~~~~~-~~iIsnpsCtt~ 155 (335)
T 1u8f_O 79 ERDPSKIKWGDAGAEYVVESTGVFTTMEKAGAHLQGGAKRVIISAPSA--DAPMFVMGVNHEKYDNS-LKIISNASCTTN 155 (335)
T ss_dssp CSSGGGCCTTTTTCCEEEECSSSCCSHHHHGGGGGGTCSEEEESSCCS--SSCBCCTTTTGGGCCTT-CSEEECCCHHHH
T ss_pred cCCHHHCccccCCCCEEEECCCchhhHHHHHHHHhCCCeEEEeccCCC--CCCeEEeccCHHHhCCC-CCEEECCChHHH
Confidence 999999999999999999999999999999999999999999999975 57999999999999875 78999999 78
Q ss_pred c
Q 025793 242 W 242 (248)
Q Consensus 242 ~ 242 (248)
|
T Consensus 156 ~ 156 (335)
T 1u8f_O 156 C 156 (335)
T ss_dssp H
T ss_pred H
Confidence 7
No 23
>2yyy_A Glyceraldehyde-3-phosphate dehydrogenase; glyceraldehyde 3-phosphate binding, alpha and beta proteins (A/B) class, MJ1146; HET: NAP; 1.85A {Methanocaldococcus jannaschii}
Probab=99.95 E-value=1.2e-30 Score=241.74 Aligned_cols=139 Identities=19% Similarity=0.221 Sum_probs=118.9
Q ss_pred ceeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeCCCChhhhhhhcccc--CcCccc--CceE-EEecCCcEEECCeEE
Q 025793 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYD--SLLGTF--KADV-KIVDNETISVDGKLI 159 (248)
Q Consensus 85 ~~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND~~~~e~~ayLLkYD--StHGkf--~g~V-~v~e~~~L~inGk~I 159 (248)
|++||||||||||||.++|++.++ +++++|+|||. ++++++|||+|| |+||+| +++| +. +++.|+++|
T Consensus 1 MmikVgI~G~G~IGr~v~r~l~~~--~~~evvaV~d~-~~~~~~~l~~~dg~s~~g~~~~~~~v~~~-~~~~l~v~~--- 73 (343)
T 2yyy_A 1 MPAKVLINGYGSIGKRVADAVSMQ--DDMEVIGVTKT-KPDFEARLAVEKGYKLFVAIPDNERVKLF-EDAGIPVEG--- 73 (343)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHS--SSEEEEEEEES-SCSHHHHHHHHTTCCEEESSCCHHHHHHH-HHTTCCCCC---
T ss_pred CceEEEEECCCHHHHHHHHHHHhC--CCceEEEEecC-CHHHHHHHHHhcCCccccccCCCceeecc-cCCeEEECC---
Confidence 358999999999999999999875 46999999998 599999999999 999999 6776 44 456677777
Q ss_pred EEEecCCCCCCCCCCCcccEEecCcccccCchhhh-HHHHcCCCEEEEcCCCCCCCCC-eEEeecCCCCCCCCCCeEEee
Q 025793 160 KVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAG-KHIQAGAKKVIITAPAKGADIP-TYVVGVNEKDYDHEVANIVRS 237 (248)
Q Consensus 160 ~v~~~~dP~~i~W~~~GidiVVE~TG~F~~~e~a~-~HL~~GAKKVIISAPsk~~D~p-tiV~GVN~~~y~~~~~~IISn 237 (248)
+|.++.| |+|+|+||||.+...+.+. .|+++| ++||+|+|.++++.| +||+|||+++|++ ++||||
T Consensus 74 ------~~~~~~~---~vDiV~eatg~~~s~~~a~~~~l~aG-~~VI~sap~~~d~vp~~vV~gvN~~~~~~--~~iIsn 141 (343)
T 2yyy_A 74 ------TILDIIE---DADIVVDGAPKKIGKQNLENIYKPHK-VKAILQGGEKAKDVEDNFNALWSYNRCYG--KDYVRV 141 (343)
T ss_dssp ------BGGGTGG---GCSEEEECCCTTHHHHHHHHTTTTTT-CEEEECTTSCGGGSSEEECTTTTHHHHTT--CSEEEE
T ss_pred ------chHHhcc---CCCEEEECCCccccHHHHHHHHHHCC-CEEEECCCccccCCCceEEcccCHHHhcc--CCEEec
Confidence 4556667 8999999999999888885 999999 779999999741378 9999999999984 589999
Q ss_pred cC--Ccc
Q 025793 238 WM--KNW 242 (248)
Q Consensus 238 AS--~~~ 242 (248)
+| +||
T Consensus 142 ~sCtT~~ 148 (343)
T 2yyy_A 142 VSCNTTG 148 (343)
T ss_dssp CCHHHHH
T ss_pred cchhhHH
Confidence 99 776
No 24
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=99.86 E-value=1.4e-23 Score=191.87 Aligned_cols=139 Identities=19% Similarity=0.209 Sum_probs=113.3
Q ss_pred ceeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeCCCChhhhhhhcccc--CcCcccCceEEEecCCcEEECCeEEEEE
Q 025793 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYD--SLLGTFKADVKIVDNETISVDGKLIKVV 162 (248)
Q Consensus 85 ~~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND~~~~e~~ayLLkYD--StHGkf~g~V~v~e~~~L~inGk~I~v~ 162 (248)
|++||||+|||+|||.++|++.++ +.+++++|+|. +.+++.++++|| ++||+|.+.+...+++.+.+++
T Consensus 1 M~irVgIiG~G~iG~~~~r~l~~~--~~~elvav~d~-~~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~~~v~~------ 71 (334)
T 2czc_A 1 MKVKVGVNGYGTIGKRVAYAVTKQ--DDMELIGITKT-KPDFEAYRAKELGIPVYAASEEFIPRFEKEGFEVAG------ 71 (334)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHTC--TTEEEEEEEES-SCSHHHHHHHHTTCCEEESSGGGHHHHHHHTCCCSC------
T ss_pred CCcEEEEEeEhHHHHHHHHHHhcC--CCCEEEEEEcC-CHHHHHHHHHhcCccccccccccceeccCCceEEcC------
Confidence 458999999999999999998865 46999999998 578899999999 9999998876211222333333
Q ss_pred ecCCCCCCCCCCCcccEEecCcccccCchhhhHHHHcCCCEEEEcCCCCCCC-C-CeEEeecCCCCCCCCCCeEEeecC-
Q 025793 163 SNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGAD-I-PTYVVGVNEKDYDHEVANIVRSWM- 239 (248)
Q Consensus 163 ~~~dP~~i~W~~~GidiVVE~TG~F~~~e~a~~HL~~GAKKVIISAPsk~~D-~-ptiV~GVN~~~y~~~~~~IISnAS- 239 (248)
|++++.| ++|+|++||+.+...+.+..||++| |+||+++|.+. | . |++|+|||+++|+. .+||+|+|
T Consensus 72 ---d~~~l~~---~vDvV~~aTp~~~h~~~a~~~l~aG-k~Vi~sap~~~-d~~~~~~v~~vn~~~~~~--~~ii~~~~C 141 (334)
T 2czc_A 72 ---TLNDLLE---KVDIIVDATPGGIGAKNKPLYEKAG-VKAIFQGGEKA-DVAEVSFVAQANYEAALG--KNYVRVVSC 141 (334)
T ss_dssp ---BHHHHHT---TCSEEEECCSTTHHHHHHHHHHHHT-CEEEECTTSCG-GGSSEEECHHHHGGGGTT--CSEEEECCH
T ss_pred ---cHHHhcc---CCCEEEECCCccccHHHHHHHHHcC-CceEeeccccc-ccccceEEeccCHHHHhh--CCcEEecCc
Confidence 4555555 8999999999999889999999999 77999999863 4 3 69999999999985 47999999
Q ss_pred -Ccc
Q 025793 240 -KNW 242 (248)
Q Consensus 240 -~~~ 242 (248)
+||
T Consensus 142 ~t~~ 145 (334)
T 2czc_A 142 NTTG 145 (334)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 776
No 25
>1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1
Probab=99.84 E-value=2.8e-23 Score=191.22 Aligned_cols=136 Identities=18% Similarity=0.169 Sum_probs=112.1
Q ss_pred eeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeCCCChhhhhhhcccc--CcCcccCceE-EEecCCcEEECCeEEEEEe
Q 025793 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYD--SLLGTFKADV-KIVDNETISVDGKLIKVVS 163 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND~~~~e~~ayLLkYD--StHGkf~g~V-~v~e~~~L~inGk~I~v~~ 163 (248)
+||||+|||||||.++|++.++ +++++++|||. ++++.+++++|| ++||.|.+.+ .. ++..|.+++.
T Consensus 2 ikVgIiGaG~iG~~l~r~L~~~--~~~elvav~d~-~~~~~~~~~~~~g~~~~~~~~~~v~~~-~~~~l~v~~~------ 71 (337)
T 1cf2_P 2 KAVAINGYGTVGKRVADAIAQQ--DDMKVIGVSKT-RPDFEARMALKKGYDLYVAIPERVKLF-EKAGIEVAGT------ 71 (337)
T ss_dssp EEEEEECCSTTHHHHHHHHHTS--SSEEEEEEEES-SCSHHHHHHHHTTCCEEESSGGGHHHH-HHTTCCCCEE------
T ss_pred eEEEEEeECHHHHHHHHHHHcC--CCcEEEEEEcC-ChhHHHHhcCCcchhhccccccceeee-cCCceEEcCC------
Confidence 7999999999999999998764 46999999997 567889999999 9999998876 32 2344555542
Q ss_pred cCCCCCCCCCCCcccEEecCcccccCchhhhHHHHcCCCEEEEcCCCCCCCC--CeEEeecCCCCCCCCCCeEEeecC--
Q 025793 164 NRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADI--PTYVVGVNEKDYDHEVANIVRSWM-- 239 (248)
Q Consensus 164 ~~dP~~i~W~~~GidiVVE~TG~F~~~e~a~~HL~~GAKKVIISAPsk~~D~--ptiV~GVN~~~y~~~~~~IISnAS-- 239 (248)
++++.| ++|+|++|||.+...+.+..|+++|+ +||+++|.++ |. |++|||||++.|+. .+||||+|
T Consensus 72 ---~~~~~~---~vDvV~~atp~~~~~~~a~~~l~aG~-~VId~sp~~~-d~~~~~~V~gvN~e~~~~--~~iIanp~C~ 141 (337)
T 1cf2_P 72 ---VDDMLD---EADIVIDCTPEGIGAKNLKMYKEKGI-KAIFQGGEKH-EDIGLSFNSLSNYEESYG--KDYTRVVSCN 141 (337)
T ss_dssp ---HHHHHH---TCSEEEECCSTTHHHHHHHHHHHHTC-CEEECTTSCH-HHHSCEECHHHHGGGGTT--CSEEEECCHH
T ss_pred ---HHHHhc---CCCEEEECCCchhhHHHHHHHHHcCC-EEEEecCCCC-ccCCCeEEeeeCHHHhcC--CCEEEcCCcH
Confidence 333333 79999999999999999999999995 5999999853 43 89999999999984 47999999
Q ss_pred Ccc
Q 025793 240 KNW 242 (248)
Q Consensus 240 ~~~ 242 (248)
+||
T Consensus 142 tt~ 144 (337)
T 1cf2_P 142 TTG 144 (337)
T ss_dssp HHH
T ss_pred HHH
Confidence 665
No 26
>1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1
Probab=99.81 E-value=3.1e-21 Score=177.82 Aligned_cols=127 Identities=16% Similarity=0.189 Sum_probs=102.9
Q ss_pred eeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeCCCChhhhhhhccccCcCcccCceEEEecCCcEEECCeEEEEEecCC
Q 025793 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRD 166 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND~~~~e~~ayLLkYDStHGkf~g~V~v~e~~~L~inGk~I~v~~~~d 166 (248)
+||||+|||||||.++|++.++ +.+++++|||. +.++.+++++|+ | ++++..++
T Consensus 2 ikVgIiGaG~iG~~~~r~L~~~--p~~elvav~d~-~~~~~~~~a~~~---g--------------------~~~~~~~~ 55 (340)
T 1b7g_O 2 VNVAVNGYGTIGKRVADAIIKQ--PDMKLVGVAKT-SPNYEAFIAHRR---G--------------------IRIYVPQQ 55 (340)
T ss_dssp EEEEEECCSHHHHHHHHHHHTC--TTEEEEEEECS-SCSHHHHHHHHT---T--------------------CCEECCGG
T ss_pred eEEEEEecCHHHHHHHHHHHcC--CCCEEEEEEcC-ChHHHHHHHHhc---C--------------------cceecCcC
Confidence 7999999999999999998865 57999999997 567888888874 1 23344445
Q ss_pred CCCCCCCCC-------------cccEEecCcccccCchhhhHHHHcCCCEEEEcCCCCCCCCCeEEeecCCCCCCCCCCe
Q 025793 167 PLQLPWAEL-------------GIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVAN 233 (248)
Q Consensus 167 P~~i~W~~~-------------GidiVVE~TG~F~~~e~a~~HL~~GAKKVIISAPsk~~D~ptiV~GVN~~~y~~~~~~ 233 (248)
|.++ |.+. ++|+|+||||.+.+.+.+..|+++|+|+|++|+|.++..+++||+|||++++.+. +
T Consensus 56 ~~~~-~~~~~v~v~~~~e~l~~~vDvV~~aTp~~~s~~~a~~~~~aG~kvV~~sa~~~~~~~~~~v~~vN~~~~~~~--~ 132 (340)
T 1b7g_O 56 SIKK-FEESGIPVAGTVEDLIKTSDIVVDTTPNGVGAQYKPIYLQLQRNAIFQGGEKAEVADISFSALCNYNEALGK--K 132 (340)
T ss_dssp GHHH-HHTTTCCCCCCHHHHHHHCSEEEECCSTTHHHHHHHHHHHTTCEEEECTTSCGGGSSCEECHHHHHHHHTTC--S
T ss_pred HHHH-hcccccccccCHhHhhcCCCEEEECCCCchhHHHHHHHHHcCCeEEEeCCCCCCCCCCEEEcCcchHHHcCC--C
Confidence 6555 6521 7999999999999999999999999999999999764334799999997666543 5
Q ss_pred EEeecC--Ccc
Q 025793 234 IVRSWM--KNW 242 (248)
Q Consensus 234 IISnAS--~~~ 242 (248)
+|||+| +||
T Consensus 133 iIsnpsCtt~~ 143 (340)
T 1b7g_O 133 YIRVVSCNTTA 143 (340)
T ss_dssp EEEECCHHHHH
T ss_pred CcccCCcHHHH
Confidence 999998 665
No 27
>2yv3_A Aspartate-semialdehyde dehydrogenase; aspartate pathway, structural genomics; 2.70A {Thermus thermophilus}
Probab=99.76 E-value=8e-19 Score=161.21 Aligned_cols=124 Identities=20% Similarity=0.216 Sum_probs=96.9
Q ss_pred eeEEEeC-CChhhHHHHHHHhhCCCCCeEEEEEeCCCChhhhhhhccccCcCcccCceEEEecCCcEEECCeEEEEEecC
Q 025793 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNR 165 (248)
Q Consensus 87 vkV~ING-FGRIGRlvlR~~~~~~~~~l~iVaIND~~~~e~~ayLLkYDStHGkf~g~V~v~e~~~L~inGk~I~v~~~~ 165 (248)
+||+||| ||||||.++|++.++.-+.++++ +|... + .++..|.++|+.+.++..
T Consensus 1 mkVaI~GAtG~iG~~llr~L~~~~~~~~~l~-------------~~~s~----------~-~~g~~l~~~g~~i~v~~~- 55 (331)
T 2yv3_A 1 MRVAVVGATGAVGREILKVLEARNFPLSELR-------------LYASP----------R-SAGVRLAFRGEEIPVEPL- 55 (331)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCCCSCCE-------------EEECG----------G-GSSCEEEETTEEEEEEEC-
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCcEEEE-------------Eeecc----------c-cCCCEEEEcCceEEEEeC-
Confidence 4899999 99999999999986532222222 22111 0 134567789999999887
Q ss_pred CCCCCCCCCCcccEEecCcccccCchhhhHHHHcCCCEEEEcCCC--CCCCCCeEEeecCCCCCCCCCCeEEeecC--Cc
Q 025793 166 DPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPA--KGADIPTYVVGVNEKDYDHEVANIVRSWM--KN 241 (248)
Q Consensus 166 dP~~i~W~~~GidiVVE~TG~F~~~e~a~~HL~~GAKKVIISAPs--k~~D~ptiV~GVN~~~y~~~~~~IISnAS--~~ 241 (248)
+|+ +| |+|+|++|||.|.+++.+..|+++|++.|.+|++. ++ |.|++|+|||++.|+.. ++||||+| +|
T Consensus 56 ~~~--~~---~~DvV~~a~g~~~s~~~a~~~~~~G~~vId~s~~~R~~~-~~~~~vpevN~~~i~~~-~~iIanp~C~tt 128 (331)
T 2yv3_A 56 PEG--PL---PVDLVLASAGGGISRAKALVWAEGGALVVDNSSAWRYEP-WVPLVVPEVNREKIFQH-RGIIANPNCTTA 128 (331)
T ss_dssp CSS--CC---CCSEEEECSHHHHHHHHHHHHHHTTCEEEECSSSSTTCT-TSCBCCTTSCGGGGGGC-SSEEECCCHHHH
T ss_pred Chh--hc---CCCEEEECCCccchHHHHHHHHHCCCEEEECCCccccCC-CCCEEEcCcCHHHhcCC-CCEEECCCHHHH
Confidence 576 68 89999999999999999999999999777777764 32 67999999999999874 57999999 66
Q ss_pred c
Q 025793 242 W 242 (248)
Q Consensus 242 ~ 242 (248)
|
T Consensus 129 ~ 129 (331)
T 2yv3_A 129 I 129 (331)
T ss_dssp H
T ss_pred H
Confidence 6
No 28
>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1
Probab=99.72 E-value=4.4e-18 Score=156.66 Aligned_cols=129 Identities=16% Similarity=0.220 Sum_probs=101.1
Q ss_pred ceeeEEEeC-CChhhHHHHHHHhhCCCCCeEEEEEeCCCChhhhhhhccccCcCcccCceEEEecCCcEEECCeEEEEEe
Q 025793 85 AKLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVS 163 (248)
Q Consensus 85 ~~vkV~ING-FGRIGRlvlR~~~~~~~~~l~iVaIND~~~~e~~ayLLkYDStHGkf~g~V~v~e~~~L~inGk~I~v~~ 163 (248)
|++||+|+| ||+|||.++|.+.++..+.++++++++... +|+ .+.++|+.+.+.
T Consensus 5 m~~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~s~~~-------------~g~-----------~~~~~g~~i~~~- 59 (340)
T 2hjs_A 5 QPLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAES-------------AGQ-----------RMGFAESSLRVG- 59 (340)
T ss_dssp CCCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTT-------------TTC-----------EEEETTEEEECE-
T ss_pred CCcEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEecCCC-------------CCC-----------ccccCCcceEEe-
Confidence 457999999 999999999999866446789999997521 121 122556666664
Q ss_pred cCCCCCCCCCCCcccEEecCcccccCchhhhHHHHcCCCEEEEcCCCCCCCCCeEEeecCCCCCCCCCC-eEEeecC--C
Q 025793 164 NRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVA-NIVRSWM--K 240 (248)
Q Consensus 164 ~~dP~~i~W~~~GidiVVE~TG~F~~~e~a~~HL~~GAKKVIISAPsk~~D~ptiV~GVN~~~y~~~~~-~IISnAS--~ 240 (248)
+.+|+. |. |+|+|++|||.+.+.+.+..|+++|+|+|.+|+|.++.+.|++|++||++.|+..++ +||||++ +
T Consensus 60 ~~~~~~--~~--~~DvV~~a~g~~~s~~~a~~~~~aG~kvId~Sa~~rd~~~~~~vpevN~~~i~~~~~~~iIanp~C~t 135 (340)
T 2hjs_A 60 DVDSFD--FS--SVGLAFFAAAAEVSRAHAERARAAGCSVIDLSGALEPSVAPPVMVSVNAERLASQAAPFLLSSPCAVA 135 (340)
T ss_dssp EGGGCC--GG--GCSEEEECSCHHHHHHHHHHHHHTTCEEEETTCTTTTTTSCBCCHHHHGGGGGGSCSSCEEECCCHHH
T ss_pred cCCHHH--hc--CCCEEEEcCCcHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCeEEcCcCHHHHhcCcCCCEEEcCCHHH
Confidence 445654 74 899999999999999999999999999999999987445688888899999985312 7999999 6
Q ss_pred cc
Q 025793 241 NW 242 (248)
Q Consensus 241 ~~ 242 (248)
||
T Consensus 136 t~ 137 (340)
T 2hjs_A 136 AE 137 (340)
T ss_dssp HH
T ss_pred HH
Confidence 65
No 29
>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*
Probab=99.71 E-value=1.1e-17 Score=153.75 Aligned_cols=128 Identities=23% Similarity=0.284 Sum_probs=100.0
Q ss_pred eeeEEEeC-CChhhHHHHHHHhhCCCCCeEEEEEeCCCChhhhhhhccccCcCcccCceEEEecCCcEEECCeEEEEEec
Q 025793 86 KLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (248)
Q Consensus 86 ~vkV~ING-FGRIGRlvlR~~~~~~~~~l~iVaIND~~~~e~~ayLLkYDStHGkf~g~V~v~e~~~L~inGk~I~v~~~ 164 (248)
++||+|+| ||+|||.++|++.++..+.+++++|++..+. |+ .+.++|+.+.+ .+
T Consensus 3 ~~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~s~~~~-------------G~-----------~~~~~~~~i~~-~~ 57 (336)
T 2r00_A 3 QFNVAIFGATGAVGETMLEVLQEREFPVDELFLLASERSE-------------GK-----------TYRFNGKTVRV-QN 57 (336)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTT-------------TC-----------EEEETTEEEEE-EE
T ss_pred ccEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEECCCCC-------------CC-----------ceeecCceeEE-ec
Confidence 47999999 9999999999998763356899999975221 11 12256666766 44
Q ss_pred CCCCCCCCCCCcccEEecCcccccCchhhhHHHHcCCCEEEEcCCCC-CCCCCeEEeecCCCCCCCCC-CeEEeecC--C
Q 025793 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAK-GADIPTYVVGVNEKDYDHEV-ANIVRSWM--K 240 (248)
Q Consensus 165 ~dP~~i~W~~~GidiVVE~TG~F~~~e~a~~HL~~GAKKVIISAPsk-~~D~ptiV~GVN~~~y~~~~-~~IISnAS--~ 240 (248)
.+|. +|. |+|+|++|||.+.+++.+..|+++|++.|.+|++.. +.+.|++|++||++.|++.+ .+||||++ +
T Consensus 58 ~~~~--~~~--~vDvVf~a~g~~~s~~~a~~~~~~G~~vId~s~~~R~~~~~~~~vpevN~~~i~~~~~~~iIanp~C~t 133 (336)
T 2r00_A 58 VEEF--DWS--QVHIALFSAGGELSAKWAPIAAEAGVVVIDNTSHFRYDYDIPLVVPEVNPEAIAEFRNRNIIANPNCST 133 (336)
T ss_dssp GGGC--CGG--GCSEEEECSCHHHHHHHHHHHHHTTCEEEECSSTTTTCTTSCBCCTTTCGGGGGGGGGTTEEECCCHHH
T ss_pred CChH--Hhc--CCCEEEECCCchHHHHHHHHHHHcCCEEEEcCCccccCCCCCeEeccCCHHHhccccCCcEEECCChHH
Confidence 5564 784 899999999999999999999999998777888752 23679999999999998521 46999999 6
Q ss_pred cc
Q 025793 241 NW 242 (248)
Q Consensus 241 ~~ 242 (248)
||
T Consensus 134 t~ 135 (336)
T 2r00_A 134 IQ 135 (336)
T ss_dssp HH
T ss_pred HH
Confidence 66
No 30
>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*
Probab=99.66 E-value=1.1e-18 Score=162.77 Aligned_cols=129 Identities=16% Similarity=0.106 Sum_probs=100.1
Q ss_pred eeEEEeC-CChhhHHHHHHHhhCCCCCeEEEEEeCCCChhhhhhhccccCcCcccCceEEEecCCcEEECCeEEEEEecC
Q 025793 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNR 165 (248)
Q Consensus 87 vkV~ING-FGRIGRlvlR~~~~~~~~~l~iVaIND~~~~e~~ayLLkYDStHGkf~g~V~v~e~~~L~inGk~I~v~~~~ 165 (248)
+||+|+| ||+||+.++|.++++ .+++++.| |+|.||| ||+- +. .++|+.+.+....
T Consensus 2 ~kVaIvGAtG~vG~~llr~ll~~--~~~~~v~i----------~~~~~~s-~G~~---v~-------~~~g~~i~~~~~~ 58 (367)
T 1t4b_A 2 QNVGFIGWRGMVGSVLMQRMVEE--RDFDAIRP----------VFFSTSQ-LGQA---AP-------SFGGTTGTLQDAF 58 (367)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHT--TGGGGSEE----------EEEESSS-TTSB---CC-------GGGTCCCBCEETT
T ss_pred cEEEEECCCCHHHHHHHHHHHhc--CCCCeEEE----------EEEEeCC-CCCC---cc-------ccCCCceEEEecC
Confidence 5899999 999999999944442 23444433 6889997 8872 21 1345667777777
Q ss_pred CCCCCCCCCCcccEEecCcccccCchhhhHHHHcCCCEEEEcCCCC---CCCCCeEEeecCCCCCCCCC--C-eEEeecC
Q 025793 166 DPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAK---GADIPTYVVGVNEKDYDHEV--A-NIVRSWM 239 (248)
Q Consensus 166 dP~~i~W~~~GidiVVE~TG~F~~~e~a~~HL~~GAKKVIISAPsk---~~D~ptiV~GVN~~~y~~~~--~-~IISnAS 239 (248)
+|++ |. |+|+|++|||.+.+++.+..|+++|+|+|||++|++ ++|.|++|++||++.|+... . ++|+|++
T Consensus 59 ~~~~--~~--~~DvVf~a~g~~~s~~~a~~~~~~G~k~vVID~ss~~R~~~~~~~~vpevN~~~i~~~~~~g~~~Ianp~ 134 (367)
T 1t4b_A 59 DLEA--LK--ALDIIVTCQGGDYTNEIYPKLRESGWQGYWIDAASSLRMKDDAIIILDPVNQDVITDGLNNGIRTFVGGN 134 (367)
T ss_dssp CHHH--HH--TCSEEEECSCHHHHHHHHHHHHHTTCCCEEEECSSTTTTCTTEEEECHHHHHHHHHHHHHTTCCEEEECC
T ss_pred ChHH--hc--CCCEEEECCCchhHHHHHHHHHHCCCCEEEEcCChhhccCCCCcEEeCCcCHHHHhhhhhcCCCEEEeCC
Confidence 7765 74 899999999999999999999999999999999984 23678999999999997420 1 6999998
Q ss_pred --Ccc
Q 025793 240 --KNW 242 (248)
Q Consensus 240 --~~~ 242 (248)
+||
T Consensus 135 Cttt~ 139 (367)
T 1t4b_A 135 CTVSL 139 (367)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 555
No 31
>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A
Probab=99.64 E-value=4.5e-17 Score=151.04 Aligned_cols=128 Identities=13% Similarity=0.123 Sum_probs=99.9
Q ss_pred eeeEEEeC-CChhhHHHHHHHhhCCCCCeEEEEEeCCCChhhhhhhccccCcCcccCceEEEecCCcEEECCeEEEEEec
Q 025793 86 KLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (248)
Q Consensus 86 ~vkV~ING-FGRIGRlvlR~~~~~~~~~l~iVaIND~~~~e~~ayLLkYDStHGkf~g~V~v~e~~~L~inGk~I~v~~~ 164 (248)
++||+|+| ||+|||.++|++.++ +.+++++|++..+.. ++||++||+|.+.+ + .+ +. + .+
T Consensus 16 ~~kV~IiGAtG~iG~~llr~L~~~--p~~elvai~~~~~~g-----~~~~~~~~~~~~~v-~-~d--l~-------~-~~ 76 (359)
T 1xyg_A 16 DIRIGLLGASGYTGAEIVRLLANH--PHFQVTLMTADRKAG-----QSMESVFPHLRAQK-L-PT--LV-------S-VK 76 (359)
T ss_dssp CEEEEEECCSSHHHHHHHHHHHTC--SSEEEEEEBCSTTTT-----SCHHHHCGGGTTSC-C-CC--CB-------C-GG
T ss_pred CcEEEEECcCCHHHHHHHHHHHcC--CCcEEEEEeCchhcC-----CCHHHhCchhcCcc-c-cc--ce-------e-cc
Confidence 48999999 999999999999875 569999999864332 78999999998764 1 11 11 1 12
Q ss_pred CCCCCCCCCCCcccEEecCcccccCchhhhHHHHcCCCEEEEcCCCCCCCC------------------CeEEeec---C
Q 025793 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADI------------------PTYVVGV---N 223 (248)
Q Consensus 165 ~dP~~i~W~~~GidiVVE~TG~F~~~e~a~~HL~~GAKKVIISAPsk~~D~------------------ptiV~GV---N 223 (248)
++ .|. |+|+|++|||.+.+.+.+..| ++|++.|-+|++..- +. +++|||| |
T Consensus 77 ---~~-~~~--~vDvVf~atp~~~s~~~a~~~-~aG~~VId~sa~~R~-~~~~~y~~~y~~~~~~~~~l~~~vygvpE~n 148 (359)
T 1xyg_A 77 ---DA-DFS--TVDAVFCCLPHGTTQEIIKEL-PTALKIVDLSADFRL-RNIAEYEEWYGQPHKAVELQKEVVYGLTEIL 148 (359)
T ss_dssp ---GC-CGG--GCSEEEECCCTTTHHHHHHTS-CTTCEEEECSSTTTC-SCHHHHHHHHSSCCSCHHHHTTCEECCHHHH
T ss_pred ---hh-Hhc--CCCEEEEcCCchhHHHHHHHH-hCCCEEEECCccccC-CchhhhhhhhcCCcCChhhcCCceEECCccC
Confidence 23 685 899999999999999999999 999976666665432 22 5899999 9
Q ss_pred CCCCCCCCCeEEeecC--Ccc
Q 025793 224 EKDYDHEVANIVRSWM--KNW 242 (248)
Q Consensus 224 ~~~y~~~~~~IISnAS--~~~ 242 (248)
++.|+. .+||||++ +||
T Consensus 149 ~~~i~~--~~iIanpgC~tt~ 167 (359)
T 1xyg_A 149 REDIKK--ARLVANPGCYPTT 167 (359)
T ss_dssp HHHHHT--CSEEECCCHHHHH
T ss_pred HHHhcc--CCEEECCCcHHHH
Confidence 999984 58999999 665
No 32
>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}
Probab=99.61 E-value=8.5e-17 Score=148.27 Aligned_cols=137 Identities=15% Similarity=0.196 Sum_probs=101.1
Q ss_pred eeeEEEeC-CChhhHHHHHHHhhCCCCCeEEEEEeCCCChhhhhhhccccCcCcccCceEEEecCCcEEECCeEEEEEec
Q 025793 86 KLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (248)
Q Consensus 86 ~vkV~ING-FGRIGRlvlR~~~~~~~~~l~iVaIND~~~~e~~ayLLkYDStHGkf~g~V~v~e~~~L~inGk~I~v~~~ 164 (248)
++||+|+| +|+|||.++|++.++ +.+++++|++... . ---+||++|+.+. ++.+.++++.+.+ .+
T Consensus 4 ~~kV~IiGAtG~iG~~llr~L~~~--p~~elvai~~s~~--~--~g~~~~~~~~~~~-------~~~~~~~~~~~~~-~~ 69 (350)
T 2ep5_A 4 KIKVSLLGSTGMVGQKMVKMLAKH--PYLELVKVSASPS--K--IGKKYKDAVKWIE-------QGDIPEEVQDLPI-VS 69 (350)
T ss_dssp CEEEEEESCSSHHHHHHHHHHTTC--SSEEEEEEECCGG--G--TTSBHHHHCCCCS-------SSSCCHHHHTCBE-EC
T ss_pred CcEEEEECcCCHHHHHHHHHHHhC--CCcEEEEEecChh--h--cCCCHHHhcCccc-------ccccccCCceeEE-ee
Confidence 58999999 999999999998765 5799999995310 0 0124789998764 1223333444444 44
Q ss_pred CCCCCCCCCCCcccEEecCcccccCchhhhHHHHcCCCEEEEcCCCC---CCCCCeEEeecCCCCCCC-C--------CC
Q 025793 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAK---GADIPTYVVGVNEKDYDH-E--------VA 232 (248)
Q Consensus 165 ~dP~~i~W~~~GidiVVE~TG~F~~~e~a~~HL~~GAKKVIISAPsk---~~D~ptiV~GVN~~~y~~-~--------~~ 232 (248)
.+|+. | .++|+|++|||.+...+.+..|+++|++ ||++++. +.|.|++|++||++.|.. + +.
T Consensus 70 ~d~~~--~--~~vDvVf~atp~~~s~~~a~~~~~aG~~--VId~s~~~R~~~~~~~~vpevn~~~~~~~e~~r~~~~~~~ 143 (350)
T 2ep5_A 70 TNYED--H--KDVDVVLSALPNELAESIELELVKNGKI--VVSNASPFRMDPDVPLINPEINWEHLELLKFQKERKGWKG 143 (350)
T ss_dssp SSGGG--G--TTCSEEEECCCHHHHHHHHHHHHHTTCE--EEECSSTTTTCTTSCBCCHHHHGGGGGGHHHHHHHHTCSS
T ss_pred CCHHH--h--cCCCEEEECCChHHHHHHHHHHHHCCCE--EEECCccccCCCCCCeeCCccCHHHhcChHhhhhhcccCc
Confidence 46654 6 3899999999999999999999999987 5667763 125799999999999973 1 14
Q ss_pred eEEeecC--Ccc
Q 025793 233 NIVRSWM--KNW 242 (248)
Q Consensus 233 ~IISnAS--~~~ 242 (248)
+||||++ +||
T Consensus 144 ~iIanpgC~tt~ 155 (350)
T 2ep5_A 144 ILVKNPNCTAAI 155 (350)
T ss_dssp EEEECCCHHHHH
T ss_pred eEEEcCchHHHH
Confidence 7999998 555
No 33
>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}
Probab=99.61 E-value=2.7e-16 Score=144.94 Aligned_cols=127 Identities=17% Similarity=0.068 Sum_probs=98.6
Q ss_pred eeeEEEeC-CChhhHHHHHHHhhCCCCCeEEEEEeCCCChhhhhhhccccCcCcccCceEEEecCCcEEECCeEEEEEec
Q 025793 86 KLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (248)
Q Consensus 86 ~vkV~ING-FGRIGRlvlR~~~~~~~~~l~iVaIND~~~~e~~ayLLkYDStHGkf~g~V~v~e~~~L~inGk~I~v~~~ 164 (248)
++||+|+| +|+|||.++|++.++ +.+++++|++..+.. .+||++|+.|.+.. .+.+.
T Consensus 4 ~~kV~IiGAtG~iG~~llr~L~~~--p~~elv~v~s~~~~g-----~~~~~~~~~~~g~~-------------~~~~~-- 61 (345)
T 2ozp_A 4 KKTLSIVGASGYAGGEFLRLALSH--PYLEVKQVTSRRFAG-----EPVHFVHPNLRGRT-------------NLKFV-- 61 (345)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTC--TTEEEEEEBCSTTTT-----SBGGGTCGGGTTTC-------------CCBCB--
T ss_pred CCEEEEECCCCHHHHHHHHHHHcC--CCcEEEEEECchhhC-----chhHHhCchhcCcc-------------ccccc--
Confidence 47999999 999999999998865 579999999863322 67999999987530 11111
Q ss_pred CCCCCCCCCCCcccEEecCcccccCchhhhHHHHcCCCEEEEcCCCCCCCC-----------------CeEEeec---CC
Q 025793 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADI-----------------PTYVVGV---NE 224 (248)
Q Consensus 165 ~dP~~i~W~~~GidiVVE~TG~F~~~e~a~~HL~~GAKKVIISAPsk~~D~-----------------ptiV~GV---N~ 224 (248)
+++ .| .|+|+|++|||.+...+.+..|+++|++.|.+|++..- +. +++|||| |+
T Consensus 62 -~~~--~~--~~vDvV~~a~g~~~s~~~a~~~~~aG~~VId~Sa~~r~-~~~~~y~~~y~~h~~~e~l~~~vygvpE~n~ 135 (345)
T 2ozp_A 62 -PPE--KL--EPADILVLALPHGVFAREFDRYSALAPVLVDLSADFRL-KDPELYRRYYGEHPRPDLLGRFVYAVPELYR 135 (345)
T ss_dssp -CGG--GC--CCCSEEEECCCTTHHHHTHHHHHTTCSEEEECSSTTSC-SCHHHHHHHHCCCSSGGGTTSSEECCHHHHH
T ss_pred -chh--Hh--cCCCEEEEcCCcHHHHHHHHHHHHCCCEEEEcCccccC-CChHHHHhhhccccchhhhccCcEeccccCH
Confidence 222 47 38999999999999999999999999986666766431 22 5899999 99
Q ss_pred CCCCCCCCeEEeecC--Ccc
Q 025793 225 KDYDHEVANIVRSWM--KNW 242 (248)
Q Consensus 225 ~~y~~~~~~IISnAS--~~~ 242 (248)
+.|+. .+||||++ +||
T Consensus 136 ~~i~~--~~iIanp~C~tt~ 153 (345)
T 2ozp_A 136 EALKG--ADWIAGAGCNATA 153 (345)
T ss_dssp HHHHT--CSEEECCCHHHHH
T ss_pred HHhhc--CCEEeCCCcHHHH
Confidence 99985 58999999 565
No 34
>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}
Probab=99.59 E-value=1.8e-16 Score=145.94 Aligned_cols=139 Identities=19% Similarity=0.210 Sum_probs=101.1
Q ss_pred ceeeEEEeC-CChhhHHHHHHHhhCCCCCeEEEEEeC-CCChhhhhhhccccCcCcccCceEEEecCCcEEECCeEEEEE
Q 025793 85 AKLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND-SGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVV 162 (248)
Q Consensus 85 ~~vkV~ING-FGRIGRlvlR~~~~~~~~~l~iVaIND-~~~~e~~ayLLkYDStHGkf~g~V~v~e~~~L~inGk~I~v~ 162 (248)
|++||+|+| +|+|||.++|++.++ +.+++++|++ +... --+||++|+.+... .+..+++.+.+
T Consensus 7 M~~kV~IiGAtG~iG~~llr~L~~~--p~~ev~~i~~s~~~~-----g~~~~~~~~~~~~~-------~~~~~~~~~~~- 71 (354)
T 1ys4_A 7 MKIKVGVLGATGSVGQRFVQLLADH--PMFELTALAASERSA-----GKKYKDACYWFQDR-------DIPENIKDMVV- 71 (354)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTC--SSEEEEEEEECTTTT-----TSBHHHHSCCCCSS-------CCCHHHHTCBC-
T ss_pred ccceEEEECcCCHHHHHHHHHHhcC--CCCEEEEEEcccccc-----cccHHHhccccccc-------ccccCceeeEE-
Confidence 668999999 999999999998765 4699999985 3211 12358888876311 01112222333
Q ss_pred ecCCCCCCCCCCCcccEEecCcccccCchhhhHHHHcCCCEEEEcCCCC---CCCCCeEEeecCCCCCCC-C--------
Q 025793 163 SNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAK---GADIPTYVVGVNEKDYDH-E-------- 230 (248)
Q Consensus 163 ~~~dP~~i~W~~~GidiVVE~TG~F~~~e~a~~HL~~GAKKVIISAPsk---~~D~ptiV~GVN~~~y~~-~-------- 230 (248)
.+.+|++ |.+.|+|+|++|||.+...+.+..|+++|++ ||++|++ +.+.|++|++||++.|.. +
T Consensus 72 ~~~~~~~--~~~~~~DvV~~atp~~~~~~~a~~~~~aG~~--VId~s~~~R~~~~~~~~vpevn~~~~~~~e~~r~~~~~ 147 (354)
T 1ys4_A 72 IPTDPKH--EEFEDVDIVFSALPSDLAKKFEPEFAKEGKL--IFSNASAYRMEEDVPLVIPEVNADHLELIEIQREKRGW 147 (354)
T ss_dssp EESCTTS--GGGTTCCEEEECCCHHHHHHHHHHHHHTTCE--EEECCSTTTTCTTSCBCCHHHHGGGGGHHHHHHHHHCC
T ss_pred EeCCHHH--HhcCCCCEEEECCCchHHHHHHHHHHHCCCE--EEECCchhcCCCCCCccCcccCHHHhcChhhhhhhccc
Confidence 3346665 7556899999999999999999999999986 7888874 225789999999999973 1
Q ss_pred CCeEEeecC--Ccc
Q 025793 231 VANIVRSWM--KNW 242 (248)
Q Consensus 231 ~~~IISnAS--~~~ 242 (248)
+.+||||++ +||
T Consensus 148 ~~~iIanpgC~tt~ 161 (354)
T 1ys4_A 148 DGAIITNPNCSTIC 161 (354)
T ss_dssp SSEEEECCCHHHHH
T ss_pred CCeEEECCCHHHHH
Confidence 146999998 555
No 35
>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A
Probab=99.16 E-value=3.9e-12 Score=118.11 Aligned_cols=130 Identities=13% Similarity=0.032 Sum_probs=95.3
Q ss_pred eeeEEEeC-CChhhHHHHHHHhhCC-CC--CeEEEEEeCCCChhhhhhhccccCcCcccCceEEEecCCcEEECCeEEEE
Q 025793 86 KLKVAING-FGRIGRNFLRCWHGRK-DS--PLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKV 161 (248)
Q Consensus 86 ~vkV~ING-FGRIGRlvlR~~~~~~-~~--~l~iVaIND~~~~e~~ayLLkYDStHGkf~g~V~v~e~~~L~inGk~I~v 161 (248)
++||+|+| +|++|+.++|.+.+++ -+ .+++++++...+..+ +++++|+.|.+... +.+
T Consensus 9 m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~~agk-----~~~~~~~~l~~~~~-------------~~~ 70 (352)
T 2nqt_A 9 ATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAGS-----TLGEHHPHLTPLAH-------------RVV 70 (352)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESSCTTS-----BGGGTCTTCGGGTT-------------CBC
T ss_pred CCEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCCcCCC-----chhhhcccccccce-------------eee
Confidence 47999999 9999999999998652 00 589999986432221 37888888865211 011
Q ss_pred EecCCCCCCCCCCCcccEEecCcccccCchhhhHHHHcCCCEEEEcCCCCCCCCCe-------------EEeec-----C
Q 025793 162 VSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPT-------------YVVGV-----N 223 (248)
Q Consensus 162 ~~~~dP~~i~W~~~GidiVVE~TG~F~~~e~a~~HL~~GAKKVIISAPsk~~D~pt-------------iV~GV-----N 223 (248)
.+.+++. |. |+|+|+.|+|.+.+.+-+..| ++|++.|.+|+|..- +++. +|||| |
T Consensus 71 -~~~~~~~--~~--~~DvVf~alg~~~s~~~~~~~-~~G~~vIDlSa~~R~-~~~~~~~~~y~~~h~~~~vyglPEv~~n 143 (352)
T 2nqt_A 71 -EPTEAAV--LG--GHDAVFLALPHGHSAVLAQQL-SPETLIIDCGADFRL-TDAAVWERFYGSSHAGSWPYGLPELPGA 143 (352)
T ss_dssp -EECCHHH--HT--TCSEEEECCTTSCCHHHHHHS-CTTSEEEECSSTTTC-SCHHHHHHHHSSCCCCCCCBSCTTSTTH
T ss_pred -ccCCHHH--hc--CCCEEEECCCCcchHHHHHHH-hCCCEEEEECCCccC-CcchhhhhhccccCCCCeeEEecccccC
Confidence 1123332 54 899999999999999999999 999988889999853 3334 59999 9
Q ss_pred CCCCCCCCCeEEeecC--Ccc
Q 025793 224 EKDYDHEVANIVRSWM--KNW 242 (248)
Q Consensus 224 ~~~y~~~~~~IISnAS--~~~ 242 (248)
.+.++. .+||+|++ ++|
T Consensus 144 ~~~i~~--~~iIanPgC~tt~ 162 (352)
T 2nqt_A 144 RDQLRG--TRRIAVPGCYPTA 162 (352)
T ss_dssp HHHHTT--CSEEECCCHHHHH
T ss_pred HHHHhc--CCEEEcCCHHHHH
Confidence 999974 58999988 444
No 36
>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A
Probab=99.10 E-value=2.1e-10 Score=107.27 Aligned_cols=128 Identities=18% Similarity=0.221 Sum_probs=92.4
Q ss_pred ceeeEEEeC-CChhhHHHHHHHhhCCCCCeEEEEEeCCCChhhhhhhccccCcCcccCceEEEecCCcEEECCeEEEEEe
Q 025793 85 AKLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVS 163 (248)
Q Consensus 85 ~~vkV~ING-FGRIGRlvlR~~~~~~~~~l~iVaIND~~~~e~~ayLLkYDStHGkf~g~V~v~e~~~L~inGk~I~v~~ 163 (248)
|++||+|-| -|.+|+.++|.+.++.-+.++++.+-..... | ..+...|+.+.+ .
T Consensus 1 m~~kVaIvGATG~vG~eLlrlL~~~~~p~~el~~~as~~sa-------------G-----------~~~~~~~~~~~~-~ 55 (366)
T 3pwk_A 1 MGYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSA-------------G-----------KSLKFKDQDITI-E 55 (366)
T ss_dssp -CEEEEEETTTSHHHHHHHHHHHTCCCCEEEEEEEECTTTT-------------T-----------CEEEETTEEEEE-E
T ss_pred CCcEEEEECCCChHHHHHHHHHhcCCCCcEEEEEEEccccC-------------C-----------CcceecCCCceE-e
Confidence 568999999 8999999999887753345677766432111 1 111123333333 3
Q ss_pred cCCCCCCCCCCCcccEEecCcccccCchhhhHHHHcCCCEEEEcCCCC-CCCCCeEEeecCCCCCCCCCCeEEeecC--C
Q 025793 164 NRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAK-GADIPTYVVGVNEKDYDHEVANIVRSWM--K 240 (248)
Q Consensus 164 ~~dP~~i~W~~~GidiVVE~TG~F~~~e~a~~HL~~GAKKVIISAPsk-~~D~ptiV~GVN~~~y~~~~~~IISnAS--~ 240 (248)
+-++.. | .++|+|++|||.+.+++.+..|+++|++.|-+|++.. +.|.|++|++||++.|+.. .+||||++ +
T Consensus 56 ~~~~~~--~--~~~Dvvf~a~~~~~s~~~a~~~~~~G~~vIDlSa~~R~~~~~p~~vpevN~~~i~~~-~~iIanpgC~t 130 (366)
T 3pwk_A 56 ETTETA--F--EGVDIALFSAGSSTSAKYAPYAVKAGVVVVDNTSYFRQNPDVPLVVPEVNAHALDAH-NGIIACPNCST 130 (366)
T ss_dssp ECCTTT--T--TTCSEEEECSCHHHHHHHHHHHHHTTCEEEECSSTTTTCTTSCBCCHHHHGGGGTTC-CSEEECCCHHH
T ss_pred eCCHHH--h--cCCCEEEECCChHhHHHHHHHHHHCCCEEEEcCCccccCCCceEEEccCCHHHHcCC-CCeEECCCcHH
Confidence 334443 4 3899999999999999999999999998888888751 2367999999999999874 68999998 5
Q ss_pred cc
Q 025793 241 NW 242 (248)
Q Consensus 241 ~~ 242 (248)
||
T Consensus 131 t~ 132 (366)
T 3pwk_A 131 IQ 132 (366)
T ss_dssp HH
T ss_pred HH
Confidence 55
No 37
>3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A
Probab=98.90 E-value=4.1e-09 Score=97.81 Aligned_cols=127 Identities=20% Similarity=0.246 Sum_probs=90.4
Q ss_pred eeEEEeC-CChhhHHHHHHHhhCCCCCeEEEEEeCCCChhhhhhhccccCcCcccCceEEEecCCcEEECCeEEEEEecC
Q 025793 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNR 165 (248)
Q Consensus 87 vkV~ING-FGRIGRlvlR~~~~~~~~~l~iVaIND~~~~e~~ayLLkYDStHGkf~g~V~v~e~~~L~inGk~I~v~~~~ 165 (248)
+||+|-| -|-.|+-++|++.++.-+.++++.+-.... -|+ .+...|+.+.+ ++-
T Consensus 2 ~~VaIvGatG~vG~el~~lL~~h~fp~~el~~~~s~~~-------------aG~-----------~~~~~~~~~~~-~~~ 56 (344)
T 3tz6_A 2 LSIGIVGATGQVGQVMRTLLDERDFPASAVRFFASARS-------------QGR-----------KLAFRGQEIEV-EDA 56 (344)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTT-------------SSC-----------EEEETTEEEEE-EET
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCceEEEEEECccc-------------CCC-----------ceeecCCceEE-EeC
Confidence 6899999 799999999998876334567776643210 011 11123444433 333
Q ss_pred CCCCCCCCCCcccEEecCcccccCchhhhHHHHcCCCEEEEcCCC-CCCCCCeEEeecCC-CCCCCCCCeEEeecC--Cc
Q 025793 166 DPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPA-KGADIPTYVVGVNE-KDYDHEVANIVRSWM--KN 241 (248)
Q Consensus 166 dP~~i~W~~~GidiVVE~TG~F~~~e~a~~HL~~GAKKVIISAPs-k~~D~ptiV~GVN~-~~y~~~~~~IISnAS--~~ 241 (248)
+++ .| .++|+|++|||.+.+++.+..|+++|++.|-+|++- .+.|.|++|++||+ +.|+..+.+||||++ +|
T Consensus 57 ~~~--~~--~~~Dvvf~a~~~~~s~~~a~~~~~~G~~vID~Sa~~R~~~~~p~~vpevN~~~~i~~~~~~iIanpgC~tt 132 (344)
T 3tz6_A 57 ETA--DP--SGLDIALFSAGSAMSKVQAPRFAAAGVTVIDNSSAWRKDPDVPLVVSEVNFERDAHRRPKGIIANPNCTTM 132 (344)
T ss_dssp TTS--CC--TTCSEEEECSCHHHHHHHHHHHHHTTCEEEECSSTTTTCTTSCBCCTTTSHHHHTTCCTTSEEECCCHHHH
T ss_pred CHH--Hh--ccCCEEEECCChHHHHHHHHHHHhCCCEEEECCCccccCCCccEEEccCCCHHHhhhcCCCEEECCCcHHH
Confidence 444 34 389999999999999999999999999777777764 12367999999999 999753247999998 65
Q ss_pred c
Q 025793 242 W 242 (248)
Q Consensus 242 ~ 242 (248)
|
T Consensus 133 ~ 133 (344)
T 3tz6_A 133 A 133 (344)
T ss_dssp H
T ss_pred H
Confidence 5
No 38
>3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A
Probab=98.79 E-value=2.5e-10 Score=106.98 Aligned_cols=128 Identities=19% Similarity=0.095 Sum_probs=87.7
Q ss_pred eeEEEeCC-ChhhHHHHH-HHhhCCCCCeEEEEEeCCCChhhhhhhccccCcCcccCceEEEecCCcEEECCeEEEEEec
Q 025793 87 LKVAINGF-GRIGRNFLR-CWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (248)
Q Consensus 87 vkV~INGF-GRIGRlvlR-~~~~~~~~~l~iVaIND~~~~e~~ayLLkYDStHGkf~g~V~v~e~~~L~inGk~I~v~~~ 164 (248)
+||||.|- |-.|+-++| ++.+++...++++.+-...--+.+ .. |. |+.+.+...
T Consensus 1 ~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~~aG~~~------~~----~~--------------~~~~~~~~~ 56 (370)
T 3pzr_A 1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIGVPA------PN----FG--------------KDAGMLHDA 56 (370)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBC------CC----SS--------------SCCCBCEET
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCCCceEEEEEeccccCcCH------HH----hC--------------CCceEEEec
Confidence 58999995 999999998 887765335677766432100000 00 11 111112222
Q ss_pred CCCCCCCCCCCcccEEecCcccccCchhhhHHHHcCCCEEEEcCCCC---CCCCCeEEeecCCCCCCCCC-C--eEEeec
Q 025793 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAK---GADIPTYVVGVNEKDYDHEV-A--NIVRSW 238 (248)
Q Consensus 165 ~dP~~i~W~~~GidiVVE~TG~F~~~e~a~~HL~~GAKKVIISAPsk---~~D~ptiV~GVN~~~y~~~~-~--~IISnA 238 (248)
.+|+. | .++|+|++|||.+.+++.+..|+++|+|+|||++|+. +.|.|++|++||++.|+..+ + ++|||+
T Consensus 57 ~~~~~--~--~~~Dvvf~a~~~~~s~~~~~~~~~~G~k~~VID~ss~fR~~~~~p~~vpevN~~~i~~~~~~~i~~Ianp 132 (370)
T 3pzr_A 57 FDIES--L--KQLDAVITCQGGSYTEKVYPALRQAGWKGYWIDAASTLRMDKEAIITLDPVNLKQILHGIHHGTKTFVGG 132 (370)
T ss_dssp TCHHH--H--TTCSEEEECSCHHHHHHHHHHHHHTTCCCEEEECSSTTTTCTTEEEECHHHHHHHHHHHHHTTCCEEEEC
T ss_pred CChhH--h--ccCCEEEECCChHHHHHHHHHHHHCCCCEEEEeCCchhccCCCCcEEcccCCHHHHhhhhhcCCcEEEcC
Confidence 23332 3 3899999999999999999999999999999999983 33679999999999996420 2 469999
Q ss_pred C--Ccc
Q 025793 239 M--KNW 242 (248)
Q Consensus 239 S--~~~ 242 (248)
+ +||
T Consensus 133 ~C~tt~ 138 (370)
T 3pzr_A 133 NCTVSL 138 (370)
T ss_dssp CHHHHH
T ss_pred ChHHHH
Confidence 8 555
No 39
>3uw3_A Aspartate-semialdehyde dehydrogenase; structural genomics, seattle structural genomics center for infectious disease (ssgcid); 1.55A {Burkholderia thailandensis}
Probab=98.73 E-value=4.1e-10 Score=105.82 Aligned_cols=130 Identities=15% Similarity=0.080 Sum_probs=88.3
Q ss_pred ceeeEEEeCC-ChhhHHHHH-HHhhCCCCCeEEEEEeCCCChhhhhhhccccCcCcccCceEEEecCCcEEECCeEEEEE
Q 025793 85 AKLKVAINGF-GRIGRNFLR-CWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVV 162 (248)
Q Consensus 85 ~~vkV~INGF-GRIGRlvlR-~~~~~~~~~l~iVaIND~~~~e~~ayLLkYDStHGkf~g~V~v~e~~~L~inGk~I~v~ 162 (248)
.++||||.|- |-.|+-++| ++.+++-..++++.+-.. ..-.. +.. |.+ +.+.+.
T Consensus 3 ~~~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~-~aG~~-----~~~----~~~--------------~~~~v~ 58 (377)
T 3uw3_A 3 GSMNVGLVGWRGMVGSVLMQRMQEEGDFDLIEPVFFSTS-NAGGK-----APS----FAK--------------NETTLK 58 (377)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESS-CTTSB-----CCT----TCC--------------SCCBCE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhhCCCCceEEEEEech-hcCCC-----HHH----cCC--------------CceEEE
Confidence 3479999995 999999998 877764334677766432 11000 000 111 111121
Q ss_pred ecCCCCCCCCCCCcccEEecCcccccCchhhhHHHHcCCCEEEEcCCCC---CCCCCeEEeecCCCCCCCCC-C--eEEe
Q 025793 163 SNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAK---GADIPTYVVGVNEKDYDHEV-A--NIVR 236 (248)
Q Consensus 163 ~~~dP~~i~W~~~GidiVVE~TG~F~~~e~a~~HL~~GAKKVIISAPsk---~~D~ptiV~GVN~~~y~~~~-~--~IIS 236 (248)
...+++. | .++|+|++|||.+.+++.+..|+++|+|+|||++|+. ++|.|++|++||++.|+..+ + ++||
T Consensus 59 ~~~~~~~--~--~~vDvvf~a~~~~~s~~~~~~~~~~G~k~~VID~ss~fR~~~~~p~~vpevN~~~i~~~~~~~i~~Ia 134 (377)
T 3uw3_A 59 DATSIDD--L--KKCDVIITCQGGDYTNDVFPKLRAAGWNGYWIDAASSLRMKDDAVIILDPVNLNVIKDALVNGTKNFI 134 (377)
T ss_dssp ETTCHHH--H--HTCSEEEECSCHHHHHHHHHHHHHTTCCSEEEECSSTTTTCTTEEEECHHHHHHHHHHHHHTTCCEEE
T ss_pred eCCChhH--h--cCCCEEEECCChHHHHHHHHHHHHCCCCEEEEeCCcccccCCCCceECCcCCHHHHhhhhhcCCcEEE
Confidence 1222322 3 3899999999999999999999999999999999983 33679999999999996420 2 4599
Q ss_pred ecC--Ccc
Q 025793 237 SWM--KNW 242 (248)
Q Consensus 237 nAS--~~~ 242 (248)
|++ +||
T Consensus 135 np~C~tt~ 142 (377)
T 3uw3_A 135 GGNCTVSL 142 (377)
T ss_dssp ECCHHHHH
T ss_pred cCCHHHHH
Confidence 998 554
No 40
>4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A*
Probab=98.69 E-value=1e-08 Score=95.44 Aligned_cols=137 Identities=18% Similarity=0.288 Sum_probs=90.9
Q ss_pred ceeeEEEeC-CChhhHHHHHHHhhCCCCCeEEEEEeCC--CChhhhhhhccccCcCcccCceEEEecCCcEEECCeEEEE
Q 025793 85 AKLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVNDS--GGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKV 161 (248)
Q Consensus 85 ~~vkV~ING-FGRIGRlvlR~~~~~~~~~l~iVaIND~--~~~e~~ayLLkYDStHGkf~g~V~v~e~~~L~inGk~I~v 161 (248)
+++||+|-| -|-+|+-++|++.++ +.++++.+-.. .+ +.+...+.+- .|..+...++ + +.+
T Consensus 6 ~~~kVaIvGATGyvG~eLlrlL~~h--P~~el~~l~S~~saG-k~~~~~~p~~-~~~~~~~~~~---~---------~~v 69 (359)
T 4dpl_A 6 RTLKAAILGATGLVGIEYVRMLSNH--PYIKPAYLAGKGSVG-KPYGEVVRWQ-TVGQVPKEIA---D---------MEI 69 (359)
T ss_dssp CCEEEEETTTTSTTHHHHHHHHTTC--SSEEEEEEEESTTTT-SBHHHHCCCC-SSSCCCHHHH---T---------CBC
T ss_pred CCCeEEEECCCCHHHHHHHHHHHhC--CCceEEEEECchhcC-CChhHhcccc-cccccccccc---c---------ceE
Confidence 458999999 699999999987765 46788877433 12 1222111110 0111110000 0 011
Q ss_pred EecCCCCCCCCCCCcccEEecCcccccCchhhhHHHHcCCCEEEEcCCCC-CCCCCeEEeecCCCCCCC--C-------C
Q 025793 162 VSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAK-GADIPTYVVGVNEKDYDH--E-------V 231 (248)
Q Consensus 162 ~~~~dP~~i~W~~~GidiVVE~TG~F~~~e~a~~HL~~GAKKVIISAPsk-~~D~ptiV~GVN~~~y~~--~-------~ 231 (248)
++-+++. | .++|+|++|||.+.+++.+..|+++|++.|.+|++.. +++.|.+|.+||++.|+. . +
T Consensus 70 -~~~~~~~--~--~~vDvvf~a~p~~~s~~~a~~~~~~G~~vIDlSa~~R~~~~~p~~vpEvN~~~i~~i~~~~~~~~~~ 144 (359)
T 4dpl_A 70 -KPTDPKL--M--DDVDIIFSPLPQGAAGPVEEQFAKEGFPVISNSPDHRFDPDVPLLVPELNPHTISLIDEQRKRREWK 144 (359)
T ss_dssp -EECCGGG--C--TTCCEEEECCCTTTHHHHHHHHHHTTCEEEECSSTTTTCTTSCBCCTTTCGGGGGHHHHHHHHHTCS
T ss_pred -EeCCHHH--h--cCCCEEEECCChHHHHHHHHHHHHCCCEEEEcCCCccCCCCccEEEcCCCHHHHhhHhhcccccccC
Confidence 1223433 3 3899999999999999999999999999999999974 336789999999999853 1 0
Q ss_pred CeEEeecC--Ccc
Q 025793 232 ANIVRSWM--KNW 242 (248)
Q Consensus 232 ~~IISnAS--~~~ 242 (248)
.+||||++ +||
T Consensus 145 ~~iIanPgC~tt~ 157 (359)
T 4dpl_A 145 GFIVTTPLCTAQG 157 (359)
T ss_dssp SEEEECCCHHHHH
T ss_pred ccEEECCCcHHHH
Confidence 25999998 554
No 41
>4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A*
Probab=98.69 E-value=1e-08 Score=95.44 Aligned_cols=137 Identities=18% Similarity=0.288 Sum_probs=90.9
Q ss_pred ceeeEEEeC-CChhhHHHHHHHhhCCCCCeEEEEEeCC--CChhhhhhhccccCcCcccCceEEEecCCcEEECCeEEEE
Q 025793 85 AKLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVNDS--GGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKV 161 (248)
Q Consensus 85 ~~vkV~ING-FGRIGRlvlR~~~~~~~~~l~iVaIND~--~~~e~~ayLLkYDStHGkf~g~V~v~e~~~L~inGk~I~v 161 (248)
+++||+|-| -|-+|+-++|++.++ +.++++.+-.. .+ +.+...+.+- .|..+...++ + +.+
T Consensus 6 ~~~kVaIvGATGyvG~eLlrlL~~h--P~~el~~l~S~~saG-k~~~~~~p~~-~~~~~~~~~~---~---------~~v 69 (359)
T 4dpk_A 6 RTLKAAILGATGLVGIEYVRMLSNH--PYIKPAYLAGKGSVG-KPYGEVVRWQ-TVGQVPKEIA---D---------MEI 69 (359)
T ss_dssp CCEEEEETTTTSTTHHHHHHHHTTC--SSEEEEEEEESTTTT-SBHHHHCCCC-SSSCCCHHHH---T---------CBC
T ss_pred CCCeEEEECCCCHHHHHHHHHHHhC--CCceEEEEECchhcC-CChhHhcccc-cccccccccc---c---------ceE
Confidence 458999999 699999999987765 46788877433 12 1222111110 0111110000 0 011
Q ss_pred EecCCCCCCCCCCCcccEEecCcccccCchhhhHHHHcCCCEEEEcCCCC-CCCCCeEEeecCCCCCCC--C-------C
Q 025793 162 VSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAK-GADIPTYVVGVNEKDYDH--E-------V 231 (248)
Q Consensus 162 ~~~~dP~~i~W~~~GidiVVE~TG~F~~~e~a~~HL~~GAKKVIISAPsk-~~D~ptiV~GVN~~~y~~--~-------~ 231 (248)
++-+++. | .++|+|++|||.+.+++.+..|+++|++.|.+|++.. +++.|.+|.+||++.|+. . +
T Consensus 70 -~~~~~~~--~--~~vDvvf~a~p~~~s~~~a~~~~~~G~~vIDlSa~~R~~~~~p~~vpEvN~~~i~~i~~~~~~~~~~ 144 (359)
T 4dpk_A 70 -KPTDPKL--M--DDVDIIFSPLPQGAAGPVEEQFAKEGFPVISNSPDHRFDPDVPLLVPELNPHTISLIDEQRKRREWK 144 (359)
T ss_dssp -EECCGGG--C--TTCCEEEECCCTTTHHHHHHHHHHTTCEEEECSSTTTTCTTSCBCCTTTCGGGGGHHHHHHHHHTCS
T ss_pred -EeCCHHH--h--cCCCEEEECCChHHHHHHHHHHHHCCCEEEEcCCCccCCCCccEEEcCCCHHHHhhHhhcccccccC
Confidence 1223433 3 3899999999999999999999999999999999974 336789999999999853 1 0
Q ss_pred CeEEeecC--Ccc
Q 025793 232 ANIVRSWM--KNW 242 (248)
Q Consensus 232 ~~IISnAS--~~~ 242 (248)
.+||||++ +||
T Consensus 145 ~~iIanPgC~tt~ 157 (359)
T 4dpk_A 145 GFIVTTPLCTAQG 157 (359)
T ss_dssp SEEEECCCHHHHH
T ss_pred ccEEECCCcHHHH
Confidence 25999998 554
No 42
>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A
Probab=98.60 E-value=6.8e-09 Score=96.00 Aligned_cols=129 Identities=18% Similarity=0.206 Sum_probs=87.2
Q ss_pred eeEEEeC-CChhhHHHHHHHhhCCCCCeEEEEEeCCC---Ch-hhhhhhccccCcCcccCceEEEecCCcEEECCeEEEE
Q 025793 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVNDSG---GV-KNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKV 161 (248)
Q Consensus 87 vkV~ING-FGRIGRlvlR~~~~~~~~~l~iVaIND~~---~~-e~~ayLLkYDStHGkf~g~V~v~e~~~L~inGk~I~v 161 (248)
+||+|.| -|.+|+.++|++.++ +.++++.+-... .. +.+ ..+|..|.+... +.+
T Consensus 5 ~kv~IvGatG~vG~~l~~~L~~~--p~~el~~l~s~~~~~saGk~~------~~~~p~~~~~~~-------------~~v 63 (337)
T 3dr3_A 5 LNTLIVGASGYAGAELVTYVNRH--PHMNITALTVSAQSNDAGKLI------SDLHPQLKGIVE-------------LPL 63 (337)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHC--TTEEEEEEEEETTCTTTTSBH------HHHCGGGTTTCC-------------CBE
T ss_pred eEEEEECCCChHHHHHHHHHHhC--CCCcEEEEEecCchhhcCCch------HHhCccccCccc-------------eeE
Confidence 7999999 699999999988875 457777663221 11 111 112333332100 011
Q ss_pred EecC-CCCCCCCCCCcccEEecCcccccCchhhhHHHHcCCCEEEEcCCCC--CCCC---------------CeEEeec-
Q 025793 162 VSNR-DPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAK--GADI---------------PTYVVGV- 222 (248)
Q Consensus 162 ~~~~-dP~~i~W~~~GidiVVE~TG~F~~~e~a~~HL~~GAKKVIISAPsk--~~D~---------------ptiV~GV- 222 (248)
++- ++++ |. .++|+|++|||.+.+++.+..|+++|++.|-+|++-. +.|. +++||||
T Consensus 64 -~~~~~~~~--~~-~~~Dvvf~a~p~~~s~~~~~~~~~~g~~vIDlSa~fR~~d~~v~~~wy~~~~~~p~l~~~~vyglP 139 (337)
T 3dr3_A 64 -QPMSDISE--FS-PGVDVVFLATAHEVSHDLAPQFLEAGCVVFDLSGAFRVNDATFYEKYYGFTHQYPELLEQAAYGLA 139 (337)
T ss_dssp -EEESSGGG--TC-TTCSEEEECSCHHHHHHHHHHHHHTTCEEEECSSTTSSSCHHHHHHHTSSCCSCHHHHHHCEECCT
T ss_pred -eccCCHHH--Hh-cCCCEEEECCChHHHHHHHHHHHHCCCEEEEcCCccccCCcccchhhccccccChhhhcceEEEcc
Confidence 111 3332 31 3799999999999999999999999999999999863 2122 2679999
Q ss_pred --CCCCCCCCCCeEEeecC--Ccc
Q 025793 223 --NEKDYDHEVANIVRSWM--KNW 242 (248)
Q Consensus 223 --N~~~y~~~~~~IISnAS--~~~ 242 (248)
|++.++. .+||||++ +||
T Consensus 140 Evn~~~i~~--~~iIanPgC~tt~ 161 (337)
T 3dr3_A 140 EWCGNKLKE--ANLIAVPGCYPTA 161 (337)
T ss_dssp TTCCHHHHT--CSEEECCCHHHHH
T ss_pred ccCHHHhCC--CCEEecCChHHHH
Confidence 9999974 58999998 444
No 43
>3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans}
Probab=98.20 E-value=2.8e-06 Score=79.83 Aligned_cols=135 Identities=21% Similarity=0.269 Sum_probs=88.5
Q ss_pred ceeeEEEeC-CChhhHHHHHHHhhCCCCCeEEEEEeC-C--CChhhhhhhccccCcCcccCceEEEecCCcEEECCeEEE
Q 025793 85 AKLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND-S--GGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIK 160 (248)
Q Consensus 85 ~~vkV~ING-FGRIGRlvlR~~~~~~~~~l~iVaIND-~--~~~e~~ayLLkYDStHGkf~g~V~v~e~~~L~inGk~I~ 160 (248)
+++||+|-| -|-.|+-++|++.++ +.++++.+-. . .+- .+...+ +|......-.+ ++.+
T Consensus 18 ~~~kVaIvGAtG~vG~ell~lL~~h--p~~el~~l~aS~~saGk-~~~~~~-------~~~~~~~~p~~------~~~~- 80 (381)
T 3hsk_A 18 SVKKAGVLGATGSVGQRFILLLSKH--PEFEIHALGASSRSAGK-KYKDAA-------SWKQTETLPET------EQDI- 80 (381)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTC--SSEEEEEEEECTTTTTS-BHHHHC-------CCCCSSCCCHH------HHTC-
T ss_pred CccEEEEECCCChHHHHHHHHHHcC--CCceEEEeeccccccCC-CHHHhc-------ccccccccccc------cccc-
Confidence 468999999 699999999988776 4578877632 2 221 121111 11100000000 0001
Q ss_pred EEecCCCCCCCCCCCcccEEecCcccccCchhhhHHHHcCCCEEEEcCCCC-CCCCCeEEeecCCCCCC-----------
Q 025793 161 VVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAK-GADIPTYVVGVNEKDYD----------- 228 (248)
Q Consensus 161 v~~~~dP~~i~W~~~GidiVVE~TG~F~~~e~a~~HL~~GAKKVIISAPsk-~~D~ptiV~GVN~~~y~----------- 228 (248)
.+++-++.+ .| .++|+|+.|+|.+..++-+..|+++|++.|-+|++-. +.|.|++|.+||.+.|.
T Consensus 81 ~v~~~~~~~-~~--~~~Dvvf~alp~~~s~~~~~~~~~~G~~VIDlSa~fR~~~~vplvv~~vn~~~~~l~E~~r~~~~~ 157 (381)
T 3hsk_A 81 VVQECKPEG-NF--LECDVVFSGLDADVAGDIEKSFVEAGLAVVSNAKNYRREKDVPLVVPIVNPEHIDVVENKVKQAVS 157 (381)
T ss_dssp BCEESSSCT-TG--GGCSEEEECCCHHHHHHHHHHHHHTTCEEEECCSTTTTCTTSCEECTTTCGGGGHHHHHHHHHHHH
T ss_pred eEEeCchhh-hc--ccCCEEEECCChhHHHHHHHHHHhCCCEEEEcCCcccCCCCCcEEecccCHHHcCCHhhhhhhhcc
Confidence 112223331 34 3799999999999999999999999999999999863 33679999999999885
Q ss_pred ---CCCCeEEeecC
Q 025793 229 ---HEVANIVRSWM 239 (248)
Q Consensus 229 ---~~~~~IISnAS 239 (248)
-.+.+||+|++
T Consensus 158 ~~~i~~~~iIaNPg 171 (381)
T 3hsk_A 158 KGGKKPGFIICISN 171 (381)
T ss_dssp TTCCCCCEEEEECC
T ss_pred cccccCCcEEECCC
Confidence 12257999987
No 44
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=97.77 E-value=3.2e-05 Score=69.66 Aligned_cols=90 Identities=19% Similarity=0.199 Sum_probs=63.6
Q ss_pred ceeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeCCCChhhhhhhccccCcCcccCceEEEecCCcEEECCeEEEEEec
Q 025793 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (248)
Q Consensus 85 ~~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND~~~~e~~ayLLkYDStHGkf~g~V~v~e~~~L~inGk~I~v~~~ 164 (248)
+++||+|.|+|+||+.+++.+... +.+++|+|-|+...+.+ . +| +. + .
T Consensus 2 ~~irV~IiG~G~mG~~~~~~l~~~--~~~elvav~d~~~~~~~----~----~g-----v~---------------~--~ 49 (320)
T 1f06_A 2 TNIRVAIVGYGNLGRSVEKLIAKQ--PDMDLVGIFSRRATLDT----K----TP-----VF---------------D--V 49 (320)
T ss_dssp CCEEEEEECCSHHHHHHHHHHTTC--SSEEEEEEEESSSCCSS----S----SC-----EE---------------E--G
T ss_pred CCCEEEEEeecHHHHHHHHHHhcC--CCCEEEEEEcCCHHHhh----c----CC-----Cc---------------e--e
Confidence 358999999999999999988653 46999999886322211 1 11 11 1 1
Q ss_pred CCCCCCCCCCCcccEEecCcccccCchhhhHHHHcCCCEEEEcCCC
Q 025793 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPA 210 (248)
Q Consensus 165 ~dP~~i~W~~~GidiVVE~TG~F~~~e~a~~HL~~GAKKVIISAPs 210 (248)
.|++++- .++|+||+||.-+...+.+...|++| +.||++.|.
T Consensus 50 ~d~~~ll---~~~DvViiatp~~~h~~~~~~al~aG-~~Vv~ekp~ 91 (320)
T 1f06_A 50 ADVDKHA---DDVDVLFLCMGSATDIPEQAPKFAQF-ACTVDTYDN 91 (320)
T ss_dssp GGGGGTT---TTCSEEEECSCTTTHHHHHHHHHTTT-SEEECCCCC
T ss_pred CCHHHHh---cCCCEEEEcCCcHHHHHHHHHHHHCC-CEEEECCCC
Confidence 2334443 37899999999887778888888877 468888885
No 45
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=97.21 E-value=0.00044 Score=61.82 Aligned_cols=89 Identities=17% Similarity=0.140 Sum_probs=59.2
Q ss_pred eeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeCCCChhhhhhhccccCcCcccCceEEEecCCcEEECCeEEEEEecC
Q 025793 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNR 165 (248)
Q Consensus 86 ~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND~~~~e~~ayLLkYDStHGkf~g~V~v~e~~~L~inGk~I~v~~~~ 165 (248)
++||+|.|+|+||+.+++.+... +.+++++|-|. +.+.+.. +|- . +....
T Consensus 9 ~irv~IIG~G~iG~~~~~~l~~~--~~~elvav~d~-~~~~~~~-------~g~-~-------------------~~~~~ 58 (304)
T 3bio_A 9 KIRAAIVGYGNIGRYALQALREA--PDFEIAGIVRR-NPAEVPF-------ELQ-P-------------------FRVVS 58 (304)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHC--TTEEEEEEECC---------------CCT-T-------------------SCEES
T ss_pred CCEEEEECChHHHHHHHHHHhcC--CCCEEEEEEcC-CHHHHHH-------cCC-C-------------------cCCHH
Confidence 58999999999999999987653 46999999887 2332211 121 0 00011
Q ss_pred CCCCCCCCCCcccEEecCcccccCchhhhHHHHcCCCEEEEcCC
Q 025793 166 DPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (248)
Q Consensus 166 dP~~i~W~~~GidiVVE~TG~F~~~e~a~~HL~~GAKKVIISAP 209 (248)
+..+. .++|+|+.||......+-+..-|++| |.||+..|
T Consensus 59 ~l~~~----~~~DvViiatp~~~h~~~~~~al~aG-~~Vi~ekP 97 (304)
T 3bio_A 59 DIEQL----ESVDVALVCSPSREVERTALEILKKG-ICTADSFD 97 (304)
T ss_dssp SGGGS----SSCCEEEECSCHHHHHHHHHHHHTTT-CEEEECCC
T ss_pred HHHhC----CCCCEEEECCCchhhHHHHHHHHHcC-CeEEECCC
Confidence 22222 36899999999988888888888877 46777666
No 46
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=97.03 E-value=0.00076 Score=57.49 Aligned_cols=32 Identities=19% Similarity=0.444 Sum_probs=26.9
Q ss_pred eeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeCC
Q 025793 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND~ 121 (248)
+||+|.|+|+||+.+++.+.. ..+++++|-|.
T Consensus 1 m~vgiIG~G~mG~~~~~~l~~---~g~~lv~v~d~ 32 (236)
T 2dc1_A 1 MLVGLIGYGAIGKFLAEWLER---NGFEIAAILDV 32 (236)
T ss_dssp CEEEEECCSHHHHHHHHHHHH---TTCEEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHhc---CCCEEEEEEec
Confidence 489999999999999998763 35898888776
No 47
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=96.90 E-value=0.00097 Score=58.82 Aligned_cols=33 Identities=18% Similarity=0.411 Sum_probs=28.5
Q ss_pred eeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeCC
Q 025793 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (248)
Q Consensus 86 ~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND~ 121 (248)
++||+|.|+||+||.+++++.++ +. ++|++-|.
T Consensus 3 MmkI~ViGaGrMG~~i~~~l~~~--~~-eLva~~d~ 35 (243)
T 3qy9_A 3 SMKILLIGYGAMNQRVARLAEEK--GH-EIVGVIEN 35 (243)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TC-EEEEEECS
T ss_pred ceEEEEECcCHHHHHHHHHHHhC--CC-EEEEEEec
Confidence 37999999999999999998875 35 89998776
No 48
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=96.77 E-value=0.0015 Score=58.18 Aligned_cols=99 Identities=19% Similarity=0.197 Sum_probs=62.6
Q ss_pred ceeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeCCCChhhhhhhccccCcCcccCceEEEecCCcEEECCeEEEEEec
Q 025793 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (248)
Q Consensus 85 ~~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND~~~~e~~ayLLkYDStHGkf~g~V~v~e~~~L~inGk~I~v~~~ 164 (248)
|++||||.|+|+||+..++.+...+..++++++|-|. +.+....+-+. || .. ++ +
T Consensus 1 M~~rigiiG~G~ig~~~~~~l~~~~~~~~~l~av~d~-~~~~a~~~a~~---~~---~~-~~---------------~-- 55 (334)
T 3ohs_X 1 MALRWGIVSVGLISSDFTAVLQTLPRSEHQVVAVAAR-DLSRAKEFAQK---HD---IP-KA---------------Y-- 55 (334)
T ss_dssp -CEEEEEECCSHHHHHHHHHHTTSCTTTEEEEEEECS-SHHHHHHHHHH---HT---CS-CE---------------E--
T ss_pred CccEEEEECchHHHHHHHHHHHhCCCCCeEEEEEEcC-CHHHHHHHHHH---cC---CC-cc---------------c--
Confidence 5689999999999999998876543345899999987 33333222110 11 00 00 0
Q ss_pred CCCCCCCCCCCcccEEecCcccccCchhhhHHHHcCCCEEEEcCCC
Q 025793 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPA 210 (248)
Q Consensus 165 ~dP~~i~W~~~GidiVVE~TG~F~~~e~a~~HL~~GAKKVIISAPs 210 (248)
.|.+++- .+-.+|+|+-||--....+-+..-|++| |.|++--|-
T Consensus 56 ~~~~~ll-~~~~vD~V~i~tp~~~H~~~~~~al~~G-khVl~EKP~ 99 (334)
T 3ohs_X 56 GSYEELA-KDPNVEVAYVGTQHPQHKAAVMLCLAAG-KAVLCEKPM 99 (334)
T ss_dssp SSHHHHH-HCTTCCEEEECCCGGGHHHHHHHHHHTT-CEEEEESSS
T ss_pred CCHHHHh-cCCCCCEEEECCCcHHHHHHHHHHHhcC-CEEEEECCC
Confidence 0111110 1236899999998877777777778888 678887774
No 49
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=96.62 E-value=0.0018 Score=57.78 Aligned_cols=97 Identities=20% Similarity=0.257 Sum_probs=62.6
Q ss_pred ceeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeCCCChhhhhhhccccCcCcccCceEEEecCCcEEECCeEEEEEec
Q 025793 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (248)
Q Consensus 85 ~~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND~~~~e~~ayLLkYDStHGkf~g~V~v~e~~~L~inGk~I~v~~~ 164 (248)
|++||+|.|+|+||+..++.+... +.+++++|-|. +.+.+..+.+. +| .. ++ +
T Consensus 1 M~~rvgiIG~G~~g~~~~~~l~~~--~~~~l~av~d~-~~~~~~~~~~~---~~---~~-~~---------------~-- 53 (344)
T 3ezy_A 1 MSLRIGVIGLGRIGTIHAENLKMI--DDAILYAISDV-REDRLREMKEK---LG---VE-KA---------------Y-- 53 (344)
T ss_dssp -CEEEEEECCSHHHHHHHHHGGGS--TTEEEEEEECS-CHHHHHHHHHH---HT---CS-EE---------------E--
T ss_pred CeeEEEEEcCCHHHHHHHHHHHhC--CCcEEEEEECC-CHHHHHHHHHH---hC---CC-ce---------------e--
Confidence 568999999999999999987653 46999999987 33333222111 11 00 00 0
Q ss_pred CCCCCCCCCCCcccEEecCcccccCchhhhHHHHcCCCEEEEcCCC
Q 025793 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPA 210 (248)
Q Consensus 165 ~dP~~i~W~~~GidiVVE~TG~F~~~e~a~~HL~~GAKKVIISAPs 210 (248)
.|++++ ..+..+|+|+-||--....+-+..-|++| |.|++--|.
T Consensus 54 ~~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~~g-k~v~~EKP~ 97 (344)
T 3ezy_A 54 KDPHEL-IEDPNVDAVLVCSSTNTHSELVIACAKAK-KHVFCEKPL 97 (344)
T ss_dssp SSHHHH-HHCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEEESCS
T ss_pred CCHHHH-hcCCCCCEEEEcCCCcchHHHHHHHHhcC-CeEEEECCC
Confidence 111111 01226899999999887777777778888 678887773
No 50
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=96.58 E-value=0.00055 Score=62.19 Aligned_cols=35 Identities=20% Similarity=0.479 Sum_probs=30.1
Q ss_pred ceeeEEEeC-CChhhHHHHHHHhhCCCCCeEEEEEeCC
Q 025793 85 AKLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (248)
Q Consensus 85 ~~vkV~ING-FGRIGRlvlR~~~~~~~~~l~iVaIND~ 121 (248)
+++||+|+| +||+||.++|++.+. +++++|++-|.
T Consensus 20 ~~irV~V~Ga~GrMGr~i~~~v~~~--~~~eLvg~vd~ 55 (288)
T 3ijp_A 20 GSMRLTVVGANGRMGRELITAIQRR--KDVELCAVLVR 55 (288)
T ss_dssp -CEEEEESSTTSHHHHHHHHHHHTC--SSEEEEEEBCC
T ss_pred CCeEEEEECCCCHHHHHHHHHHHhC--CCCEEEEEEec
Confidence 468999999 999999999988754 57999999876
No 51
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=96.54 E-value=0.0025 Score=56.25 Aligned_cols=74 Identities=24% Similarity=0.376 Sum_probs=48.0
Q ss_pred eeEEEeCC-ChhhHHHHHHHhhCCCCCeEEEEEeCC-CChhhhhhhccccCcCcccCceEEEecCCcEEECCeEEEEEec
Q 025793 87 LKVAINGF-GRIGRNFLRCWHGRKDSPLDVVVVNDS-GGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (248)
Q Consensus 87 vkV~INGF-GRIGRlvlR~~~~~~~~~l~iVaIND~-~~~e~~ayLLkYDStHGkf~g~V~v~e~~~L~inGk~I~v~~~ 164 (248)
+||+|+|. ||+||.+.+.+.+. +.+++|++-|. .+++. ++.. ..+|-+| .
T Consensus 1 mkV~V~Ga~G~mG~~i~~~~~~~--~~~elva~~d~~~dl~~---~~~~-------~~DvvID----------------f 52 (245)
T 1p9l_A 1 MRVGVLGAKGKVGTTMVRAVAAA--DDLTLSAELDAGDPLSL---LTDG-------NTEVVID----------------F 52 (245)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHC--TTCEEEEEECTTCCTHH---HHHT-------TCCEEEE----------------C
T ss_pred CEEEEECCCCHHHHHHHHHHHhC--CCCEEEEEEccCCCHHH---Hhcc-------CCcEEEE----------------c
Confidence 48999996 99999999987654 35899988876 34432 2221 1234432 1
Q ss_pred CCCCC----CCC-CCCcccEEecCcccccC
Q 025793 165 RDPLQ----LPW-AELGIDIVIEGTGVFVD 189 (248)
Q Consensus 165 ~dP~~----i~W-~~~GidiVVE~TG~F~~ 189 (248)
-.|+. +.+ .+.|+++|+.+|| |.+
T Consensus 53 T~p~a~~~~~~~a~~~g~~~VigTTG-~~~ 81 (245)
T 1p9l_A 53 THPDVVMGNLEFLIDNGIHAVVGTTG-FTA 81 (245)
T ss_dssp SCTTTHHHHHHHHHHTTCEEEECCCC-CCH
T ss_pred cChHHHHHHHHHHHHcCCCEEEcCCC-CCH
Confidence 13432 223 4679999999999 544
No 52
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=96.52 E-value=0.0056 Score=54.18 Aligned_cols=94 Identities=21% Similarity=0.271 Sum_probs=62.3
Q ss_pred ceeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeCCCChhhhhhhccccCcCcccCceEEEecCCcEEECCeEEEEEec
Q 025793 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (248)
Q Consensus 85 ~~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND~~~~e~~ayLLkYDStHGkf~g~V~v~e~~~L~inGk~I~v~~~ 164 (248)
|++||+|.|+|+||+..++.+... +.+++++|-|. +.+.+..+-+. |... .
T Consensus 2 m~~~vgiiG~G~~g~~~~~~l~~~--~~~~l~av~d~-~~~~~~~~~~~------~~~~--~------------------ 52 (331)
T 4hkt_A 2 MTVRFGLLGAGRIGKVHAKAVSGN--ADARLVAVADA-FPAAAEAIAGA------YGCE--V------------------ 52 (331)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHC--TTEEEEEEECS-SHHHHHHHHHH------TTCE--E------------------
T ss_pred CceEEEEECCCHHHHHHHHHHhhC--CCcEEEEEECC-CHHHHHHHHHH------hCCC--c------------------
Confidence 678999999999999999987654 46999999988 33333222211 1111 1
Q ss_pred CCCCCCCCCCCcccEEecCcccccCchhhhHHHHcCCCEEEEcCC
Q 025793 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (248)
Q Consensus 165 ~dP~~i~W~~~GidiVVE~TG~F~~~e~a~~HL~~GAKKVIISAP 209 (248)
.|++++ ..+-.+|+|+-||--....+-+..-|++| |.|++--|
T Consensus 53 ~~~~~~-l~~~~~D~V~i~tp~~~h~~~~~~al~~g-k~v~~EKP 95 (331)
T 4hkt_A 53 RTIDAI-EAAADIDAVVICTPTDTHADLIERFARAG-KAIFCEKP 95 (331)
T ss_dssp CCHHHH-HHCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEECSC
T ss_pred CCHHHH-hcCCCCCEEEEeCCchhHHHHHHHHHHcC-CcEEEecC
Confidence 111111 01226899999998877777777778887 67888767
No 53
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=96.48 E-value=0.0031 Score=55.87 Aligned_cols=97 Identities=18% Similarity=0.164 Sum_probs=61.2
Q ss_pred ceeeEEEeCCChhhHHHHHHHh-hCCCCCeEEEEEeCCCChhhhhhhccccCcCcccCceEEEecCCcEEECCeEEEEEe
Q 025793 85 AKLKVAINGFGRIGRNFLRCWH-GRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVS 163 (248)
Q Consensus 85 ~~vkV~INGFGRIGRlvlR~~~-~~~~~~l~iVaIND~~~~e~~ayLLkYDStHGkf~g~V~v~e~~~L~inGk~I~v~~ 163 (248)
.++||+|.|+|+||+..++.+. .. ..+++|+|-|. +.+.+..+-+ .+| .. .+ +
T Consensus 7 ~~~~v~iiG~G~ig~~~~~~l~~~~--~~~~~vav~d~-~~~~~~~~a~---~~g---~~-~~---------------~- 60 (346)
T 3cea_A 7 KPLRAAIIGLGRLGERHARHLVNKI--QGVKLVAACAL-DSNQLEWAKN---ELG---VE-TT---------------Y- 60 (346)
T ss_dssp CCEEEEEECCSTTHHHHHHHHHHTC--SSEEEEEEECS-CHHHHHHHHH---TTC---CS-EE---------------E-
T ss_pred CcceEEEEcCCHHHHHHHHHHHhcC--CCcEEEEEecC-CHHHHHHHHH---HhC---CC-cc---------------c-
Confidence 4589999999999999988876 32 46899999887 3333321111 011 10 11 1
Q ss_pred cCCCCCCCCCCCcccEEecCcccccCchhhhHHHHcCCCEEEEcCCC
Q 025793 164 NRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPA 210 (248)
Q Consensus 164 ~~dP~~i~W~~~GidiVVE~TG~F~~~e~a~~HL~~GAKKVIISAPs 210 (248)
.|++++- .+.++|+|+.||.-....+-+..-|++| |.|++--|.
T Consensus 61 -~~~~~~l-~~~~~D~V~i~tp~~~h~~~~~~al~~G-~~v~~eKp~ 104 (346)
T 3cea_A 61 -TNYKDMI-DTENIDAIFIVAPTPFHPEMTIYAMNAG-LNVFCEKPL 104 (346)
T ss_dssp -SCHHHHH-TTSCCSEEEECSCGGGHHHHHHHHHHTT-CEEEECSCC
T ss_pred -CCHHHHh-cCCCCCEEEEeCChHhHHHHHHHHHHCC-CEEEEcCCC
Confidence 1122110 1136899999999887777777778887 567765553
No 54
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=96.40 E-value=0.0021 Score=57.52 Aligned_cols=82 Identities=18% Similarity=0.249 Sum_probs=53.0
Q ss_pred ceeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeCCCChhhhhhhccccCcCcccCceEEEecCCcEEECCeEEEEEec
Q 025793 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (248)
Q Consensus 85 ~~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND~~~~e~~ayLLkYDStHGkf~g~V~v~e~~~L~inGk~I~v~~~ 164 (248)
..+||+|.|||.|||.++|. + .++++++-+ ++. |.+ | +...
T Consensus 11 ~~~rV~i~G~GaIG~~v~~~---~---~leLv~v~~----~k~----------gel---------------g----v~a~ 51 (253)
T 1j5p_A 11 HHMTVLIIGMGNIGKKLVEL---G---NFEKIYAYD----RIS----------KDI---------------P----GVVR 51 (253)
T ss_dssp CCCEEEEECCSHHHHHHHHH---S---CCSEEEEEC----SSC----------CCC---------------S----SSEE
T ss_pred ccceEEEECcCHHHHHHHhc---C---CcEEEEEEe----ccc----------ccc---------------C----ceee
Confidence 45799999999999999997 2 588888765 211 111 1 1112
Q ss_pred CCCCCCCCCCCcccEEecCcccccCchhhhHHHHcCCCEEEEcCC
Q 025793 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (248)
Q Consensus 165 ~dP~~i~W~~~GidiVVE~TG~F~~~e~a~~HL~~GAKKVIISAP 209 (248)
.|.+++.. ..|+||||.+..--.+-..+-|++|.. |+++++
T Consensus 52 ~d~d~lla---~pD~VVe~A~~~av~e~~~~iL~aG~d-vv~~S~ 92 (253)
T 1j5p_A 52 LDEFQVPS---DVSTVVECASPEAVKEYSLQILKNPVN-YIIIST 92 (253)
T ss_dssp CSSCCCCT---TCCEEEECSCHHHHHHHHHHHTTSSSE-EEECCG
T ss_pred CCHHHHhh---CCCEEEECCCHHHHHHHHHHHHHCCCC-EEEcCh
Confidence 35666652 678999998877555555666667765 444444
No 55
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=96.35 E-value=0.0056 Score=54.46 Aligned_cols=34 Identities=24% Similarity=0.442 Sum_probs=28.4
Q ss_pred eeeEEEeCC-ChhhHHHHHHHhhCCCCCeEEEEEeCC
Q 025793 86 KLKVAINGF-GRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (248)
Q Consensus 86 ~vkV~INGF-GRIGRlvlR~~~~~~~~~l~iVaIND~ 121 (248)
++||+|.|+ ||+||.+++.+.+. +.+++|++-|.
T Consensus 5 ~mkV~V~Ga~G~mG~~~~~~~~~~--~~~elva~~d~ 39 (273)
T 1dih_A 5 NIRVAIAGAGGRMGRQLIQAALAL--EGVQLGAALER 39 (273)
T ss_dssp BEEEEETTTTSHHHHHHHHHHHHS--TTEECCCEECC
T ss_pred CcEEEEECCCCHHHHHHHHHHHhC--CCCEEEEEEec
Confidence 489999999 99999999987754 45899887665
No 56
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=96.34 E-value=0.008 Score=53.47 Aligned_cols=96 Identities=22% Similarity=0.310 Sum_probs=63.6
Q ss_pred ceeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeCCCChhhhhhhccccCcCcccCceEEEecCCcEEECCeEEEEEec
Q 025793 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (248)
Q Consensus 85 ~~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND~~~~e~~ayLLkYDStHGkf~g~V~v~e~~~L~inGk~I~v~~~ 164 (248)
+++||+|.|+|+||+..++.+... +.+++++|-|. +.+.+..+.+ +|. +.+.
T Consensus 3 ~~~rvgiiG~G~~g~~~~~~l~~~--~~~~l~av~d~-~~~~~~~~a~------~~g--~~~~----------------- 54 (344)
T 3euw_A 3 LTLRIALFGAGRIGHVHAANIAAN--PDLELVVIADP-FIEGAQRLAE------ANG--AEAV----------------- 54 (344)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHC--TTEEEEEEECS-SHHHHHHHHH------TTT--CEEE-----------------
T ss_pred CceEEEEECCcHHHHHHHHHHHhC--CCcEEEEEECC-CHHHHHHHHH------HcC--Ccee-----------------
Confidence 358999999999999999987764 46999999887 3333322211 111 1111
Q ss_pred CCCCCCCCCCCcccEEecCcccccCchhhhHHHHcCCCEEEEcCCC
Q 025793 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPA 210 (248)
Q Consensus 165 ~dP~~i~W~~~GidiVVE~TG~F~~~e~a~~HL~~GAKKVIISAPs 210 (248)
.|++++ ..+..+|+|+-||--....+-+..-|++| |.|++--|.
T Consensus 55 ~~~~~~-l~~~~~D~V~i~tp~~~h~~~~~~al~~g-k~v~~EKP~ 98 (344)
T 3euw_A 55 ASPDEV-FARDDIDGIVIGSPTSTHVDLITRAVERG-IPALCEKPI 98 (344)
T ss_dssp SSHHHH-TTCSCCCEEEECSCGGGHHHHHHHHHHTT-CCEEECSCS
T ss_pred CCHHHH-hcCCCCCEEEEeCCchhhHHHHHHHHHcC-CcEEEECCC
Confidence 112221 11236899999998887777777888888 668887773
No 57
>1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=96.27 E-value=0.0011 Score=61.83 Aligned_cols=123 Identities=15% Similarity=0.144 Sum_probs=81.8
Q ss_pred ceeeEEEeC-CChhhHHHHHHHhhCCCCCeEEEEEeCCCChhhhhhhccccCcCcccCceEEEecCCcEEECCeEEEEEe
Q 025793 85 AKLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVS 163 (248)
Q Consensus 85 ~~vkV~ING-FGRIGRlvlR~~~~~~~~~l~iVaIND~~~~e~~ayLLkYDStHGkf~g~V~v~e~~~L~inGk~I~v~~ 163 (248)
.++||+|-| .|..|+.++|++.++ +.++++.+......- -+|+++|..|..++.+ .
T Consensus 12 ~~~~V~IvGAtG~vG~ellrlL~~h--P~~el~~l~S~~~aG-----~~~~~~~p~~~~~l~~----------------~ 68 (351)
T 1vkn_A 12 HMIRAGIIGATGYTGLELVRLLKNH--PEAKITYLSSRTYAG-----KKLEEIFPSTLENSIL----------------S 68 (351)
T ss_dssp CCEEEEEESTTSHHHHHHHHHHHHC--TTEEEEEEECSTTTT-----SBHHHHCGGGCCCCBC----------------B
T ss_pred ceeEEEEECCCCHHHHHHHHHHHcC--CCcEEEEEeCccccc-----CChHHhChhhccCceE----------------E
Confidence 458999996 799999999999887 468999988652221 3456667666511111 1
Q ss_pred cCCCCCCCCCCCcccEEecCcccccCchhhhHHHHcCCCEEEEcCCCC---CC-C-----------CCeE---Eeec---
Q 025793 164 NRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAK---GA-D-----------IPTY---VVGV--- 222 (248)
Q Consensus 164 ~~dP~~i~W~~~GidiVVE~TG~F~~~e~a~~HL~~GAKKVIISAPsk---~~-D-----------~pti---V~GV--- 222 (248)
+-+++++ | .++|+|+-|+|--..++-+..+ +|+ +||...+. ++ | .|.+ |||+
T Consensus 69 ~~~~~~~-~--~~~Dvvf~alp~~~s~~~~~~~--~g~--~VIDlSsdfRl~~~~~y~~~y~~~h~~p~~~~~~yglPE~ 141 (351)
T 1vkn_A 69 EFDPEKV-S--KNCDVLFTALPAGASYDLVREL--KGV--KIIDLGADFRFDDPGVYREWYGKELSGYENIKRVYGLPEL 141 (351)
T ss_dssp CCCHHHH-H--HHCSEEEECCSTTHHHHHHTTC--CSC--EEEESSSTTTCSSHHHHHHHHCCCCTTGGGCCEEECCHHH
T ss_pred eCCHHHh-h--cCCCEEEECCCcHHHHHHHHHh--CCC--EEEECChhhhCCchhhhhhhcCCCCCchhhcCCceECCcc
Confidence 2233332 2 3799999999988877776665 555 46776652 10 1 1334 9998
Q ss_pred CCCCCCCCCCeEEeecC
Q 025793 223 NEKDYDHEVANIVRSWM 239 (248)
Q Consensus 223 N~~~y~~~~~~IISnAS 239 (248)
|.+.++. .+||+|..
T Consensus 142 n~e~i~~--a~iIANPg 156 (351)
T 1vkn_A 142 HREEIKN--AQVVGNPG 156 (351)
T ss_dssp HHHHHTT--CSEEECCC
T ss_pred CHHHhcc--CCEEeCCC
Confidence 8888875 47999875
No 58
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=96.24 E-value=0.0055 Score=54.67 Aligned_cols=99 Identities=20% Similarity=0.253 Sum_probs=63.5
Q ss_pred ceeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeCCCChhhhhhhccccCcCcccCceEEEecCCcEEECCeEEEEEec
Q 025793 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (248)
Q Consensus 85 ~~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND~~~~e~~ayLLkYDStHGkf~g~V~v~e~~~L~inGk~I~v~~~ 164 (248)
|++||+|.|+|+||+..++.+..+ .+.+++++|-|. +.+.+..+-+ .||. .+.+ +
T Consensus 1 M~~rigiIG~G~~g~~~~~~l~~~-~~~~~l~av~d~-~~~~~~~~~~---~~g~---~~~~---------------~-- 55 (344)
T 3mz0_A 1 MSLRIGVIGTGAIGKEHINRITNK-LSGAEIVAVTDV-NQEAAQKVVE---QYQL---NATV---------------Y-- 55 (344)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHT-CSSEEEEEEECS-SHHHHHHHHH---HTTC---CCEE---------------E--
T ss_pred CeEEEEEECccHHHHHHHHHHHhh-CCCcEEEEEEcC-CHHHHHHHHH---HhCC---CCee---------------e--
Confidence 568999999999999999987632 246999999987 3333322211 0120 0111 1
Q ss_pred CCCCCCCCCCCcccEEecCcccccCchhhhHHHHcCCCEEEEcCCC
Q 025793 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPA 210 (248)
Q Consensus 165 ~dP~~i~W~~~GidiVVE~TG~F~~~e~a~~HL~~GAKKVIISAPs 210 (248)
.|++++- .+..+|+|+-||--....+-+..-|++| |.|++--|-
T Consensus 56 ~~~~~ll-~~~~~D~V~i~tp~~~h~~~~~~al~~G-k~vl~EKP~ 99 (344)
T 3mz0_A 56 PNDDSLL-ADENVDAVLVTSWGPAHESSVLKAIKAQ-KYVFCEKPL 99 (344)
T ss_dssp SSHHHHH-HCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEECSCS
T ss_pred CCHHHHh-cCCCCCEEEECCCchhHHHHHHHHHHCC-CcEEEcCCC
Confidence 1111110 1235899999998887778888888888 678887773
No 59
>2ejw_A HDH, homoserine dehydrogenase; NAD-dependent, oxidoreductase; 1.70A {Thermus thermophilus}
Probab=96.22 E-value=0.011 Score=54.36 Aligned_cols=36 Identities=25% Similarity=0.253 Sum_probs=29.5
Q ss_pred eeeEEEeCCChhhHHHHHHHhhCCC------CCeEEEEEeCC
Q 025793 86 KLKVAINGFGRIGRNFLRCWHGRKD------SPLDVVVVNDS 121 (248)
Q Consensus 86 ~vkV~INGFGRIGRlvlR~~~~~~~------~~l~iVaIND~ 121 (248)
++||+|.|||.||+.+++.+..... .++++++|-|.
T Consensus 3 ~irvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~ 44 (332)
T 2ejw_A 3 ALKIALLGGGTVGSAFYNLVLERAEELSAFGVVPRFLGVLVR 44 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTGGGGGGGTEEEEEEEEECS
T ss_pred eeEEEEEcCCHHHHHHHHHHHhChhhHhhcCCCEEEEEEEEC
Confidence 5899999999999999998765421 15899999886
No 60
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=96.18 E-value=0.005 Score=45.10 Aligned_cols=98 Identities=23% Similarity=0.269 Sum_probs=57.5
Q ss_pred ceeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeCCCChhhhhhhccccCcCcccCceEEEecCCcEEECCeEEEEEec
Q 025793 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (248)
Q Consensus 85 ~~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND~~~~e~~ayLLkYDStHGkf~g~V~v~e~~~L~inGk~I~v~~~ 164 (248)
+..+|.|.|.|.||+.+++.+..+. ..+++++.-. .+.+..+.++ | ..+.. ..-
T Consensus 4 ~~~~v~I~G~G~iG~~~~~~l~~~g--~~~v~~~~r~--~~~~~~~~~~----~---~~~~~---------------~d~ 57 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQMIAALLKTSS--NYSVTVADHD--LAALAVLNRM----G---VATKQ---------------VDA 57 (118)
T ss_dssp TCEEEEEECCSHHHHHHHHHHHHCS--SEEEEEEESC--HHHHHHHHTT----T---CEEEE---------------CCT
T ss_pred CcCeEEEECCCHHHHHHHHHHHhCC--CceEEEEeCC--HHHHHHHHhC----C---CcEEE---------------ecC
Confidence 4468999999999999999887642 2566665432 2333322211 1 11110 011
Q ss_pred CCCCCCCCCCCcccEEecCcccccCchhhhHHHHcCCCEEEEcC
Q 025793 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITA 208 (248)
Q Consensus 165 ~dP~~i~W~~~GidiVVE~TG~F~~~e~a~~HL~~GAKKVIISA 208 (248)
.+++.+.-.-.++|+||+|+|......-+..-++.|.+.+.+|.
T Consensus 58 ~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~~~~~g~~~~~~~~ 101 (118)
T 3ic5_A 58 KDEAGLAKALGGFDAVISAAPFFLTPIIAKAAKAAGAHYFDLTE 101 (118)
T ss_dssp TCHHHHHHHTTTCSEEEECSCGGGHHHHHHHHHHTTCEEECCCS
T ss_pred CCHHHHHHHHcCCCEEEECCCchhhHHHHHHHHHhCCCEEEecC
Confidence 11211111112789999999987666666666678988887764
No 61
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=96.12 E-value=0.011 Score=52.21 Aligned_cols=95 Identities=20% Similarity=0.289 Sum_probs=60.4
Q ss_pred eeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeCCCChhhhhhhccccCcCcccCceEEEecCCcEEECCeEEEEEecC
Q 025793 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNR 165 (248)
Q Consensus 86 ~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND~~~~e~~ayLLkYDStHGkf~g~V~v~e~~~L~inGk~I~v~~~~ 165 (248)
++||+|.|+|+||+..++.+... +.+++++|-|. +.+....+-+ .+| . +. ++ .
T Consensus 1 ~~~vgiiG~G~~g~~~~~~l~~~--~~~~~~~v~d~-~~~~~~~~~~---~~~---~-~~---------------~~--~ 53 (325)
T 2ho3_A 1 MLKLGVIGTGAISHHFIEAAHTS--GEYQLVAIYSR-KLETAATFAS---RYQ---N-IQ---------------LF--D 53 (325)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT--TSEEEEEEECS-SHHHHHHHGG---GSS---S-CE---------------EE--S
T ss_pred CeEEEEEeCCHHHHHHHHHHHhC--CCeEEEEEEeC-CHHHHHHHHH---HcC---C-Ce---------------Ee--C
Confidence 37999999999999999987653 46899999887 3333322211 111 0 01 11 1
Q ss_pred CCCCCCCCCCcccEEecCcccccCchhhhHHHHcCCCEEEEcCCC
Q 025793 166 DPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPA 210 (248)
Q Consensus 166 dP~~i~W~~~GidiVVE~TG~F~~~e~a~~HL~~GAKKVIISAPs 210 (248)
|++++- +..+|+|+.||--....+-+..-|++| |.|++--|.
T Consensus 54 ~~~~~l--~~~~D~V~i~tp~~~h~~~~~~al~~g-k~V~~EKP~ 95 (325)
T 2ho3_A 54 QLEVFF--KSSFDLVYIASPNSLHFAQAKAALSAG-KHVILEKPA 95 (325)
T ss_dssp CHHHHH--TSSCSEEEECSCGGGHHHHHHHHHHTT-CEEEEESSC
T ss_pred CHHHHh--CCCCCEEEEeCChHHHHHHHHHHHHcC-CcEEEecCC
Confidence 233332 236899999998776666666777777 457776663
No 62
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=96.02 E-value=0.0068 Score=53.95 Aligned_cols=96 Identities=20% Similarity=0.178 Sum_probs=61.6
Q ss_pred ceeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeCCCChhhhhhhccccCcCcccCceEEEecCCcEEECCeEEEEEec
Q 025793 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (248)
Q Consensus 85 ~~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND~~~~e~~ayLLkYDStHGkf~g~V~v~e~~~L~inGk~I~v~~~ 164 (248)
+++||+|.|+|+||+..++.+... +.+++++|-|.. .+....+.+. +|- . ++ .
T Consensus 4 ~~~~igiiG~G~~g~~~~~~l~~~--~~~~l~av~d~~-~~~~~~~~~~---~~~---~-~~-----------------~ 56 (330)
T 3e9m_A 4 DKIRYGIMSTAQIVPRFVAGLRES--AQAEVRGIASRR-LENAQKMAKE---LAI---P-VA-----------------Y 56 (330)
T ss_dssp CCEEEEECSCCTTHHHHHHHHHHS--SSEEEEEEBCSS-SHHHHHHHHH---TTC---C-CC-----------------B
T ss_pred CeEEEEEECchHHHHHHHHHHHhC--CCcEEEEEEeCC-HHHHHHHHHH---cCC---C-ce-----------------e
Confidence 458999999999999999988764 468999998873 2332222111 110 0 00 0
Q ss_pred CCCCCCCCCCCcccEEecCcccccCchhhhHHHHcCCCEEEEcCC
Q 025793 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (248)
Q Consensus 165 ~dP~~i~W~~~GidiVVE~TG~F~~~e~a~~HL~~GAKKVIISAP 209 (248)
.|++++ ..+..+|+|+-||--....+-+..-|++| |.|++--|
T Consensus 57 ~~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~~g-k~vl~EKP 99 (330)
T 3e9m_A 57 GSYEEL-CKDETIDIIYIPTYNQGHYSAAKLALSQG-KPVLLEKP 99 (330)
T ss_dssp SSHHHH-HHCTTCSEEEECCCGGGHHHHHHHHHHTT-CCEEECSS
T ss_pred CCHHHH-hcCCCCCEEEEcCCCHHHHHHHHHHHHCC-CeEEEeCC
Confidence 111111 01226899999998887777777778887 56888777
No 63
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=95.99 E-value=0.0078 Score=53.97 Aligned_cols=97 Identities=23% Similarity=0.229 Sum_probs=61.8
Q ss_pred ceeeEEEeCCChhhH-HHHHHHhhCCCCCeEEEEEeCCCChhhhhhhccccCcCcccCceEEEecCCcEEECCeEEEEEe
Q 025793 85 AKLKVAINGFGRIGR-NFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVS 163 (248)
Q Consensus 85 ~~vkV~INGFGRIGR-lvlR~~~~~~~~~l~iVaIND~~~~e~~ayLLkYDStHGkf~g~V~v~e~~~L~inGk~I~v~~ 163 (248)
|++||||.|+|+||+ ..++++.. .+.+++++|-|+...+..+- +| |.+. +.+ +
T Consensus 1 M~~rvgiiG~G~~g~~~~~~~l~~--~~~~~l~av~d~~~~~~~a~--~~----~~~~--~~~---------------~- 54 (349)
T 3i23_A 1 MTVKMGFIGFGKSANRYHLPYVMI--RETLEVKTIFDLHVNEKAAA--PF----KEKG--VNF---------------T- 54 (349)
T ss_dssp CCEEEEEECCSHHHHHTTHHHHTT--CTTEEEEEEECTTCCHHHHH--HH----HTTT--CEE---------------E-
T ss_pred CeeEEEEEccCHHHHHHHHHHHhh--CCCeEEEEEECCCHHHHHHH--hh----CCCC--CeE---------------E-
Confidence 578999999999998 56676543 35799999998742222221 11 1111 111 1
Q ss_pred cCCCCCCCCCCCcccEEecCcccccCchhhhHHHHcCCCEEEEcCCC
Q 025793 164 NRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPA 210 (248)
Q Consensus 164 ~~dP~~i~W~~~GidiVVE~TG~F~~~e~a~~HL~~GAKKVIISAPs 210 (248)
.|++++- .+-++|+|+-||--....+-+..-|++| |.|++=-|-
T Consensus 55 -~~~~~ll-~~~~~D~V~i~tp~~~h~~~~~~al~aG-k~Vl~EKP~ 98 (349)
T 3i23_A 55 -ADLNELL-TDPEIELITICTPAHTHYDLAKQAILAG-KSVIVEKPF 98 (349)
T ss_dssp -SCTHHHH-SCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEECSCS
T ss_pred -CCHHHHh-cCCCCCEEEEeCCcHHHHHHHHHHHHcC-CEEEEECCC
Confidence 1222221 1236899999998877777777778888 778876663
No 64
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=95.99 E-value=0.006 Score=55.24 Aligned_cols=95 Identities=24% Similarity=0.256 Sum_probs=57.9
Q ss_pred ceeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeCCC--C-hhhhhhhccccCcCcccCceEEEecCCcEEECCeEEEE
Q 025793 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSG--G-VKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKV 161 (248)
Q Consensus 85 ~~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND~~--~-~e~~ayLLkYDStHGkf~g~V~v~e~~~L~inGk~I~v 161 (248)
+++||+|.|+|.||+.++|.+..+ .+.+++++|-|.. . .+.++- +| | ....
T Consensus 3 ~~irVaIIG~G~iG~~~~~~l~~~-~~~~elvav~d~~~~~~~~~~a~--~~----g---~~~~---------------- 56 (312)
T 1nvm_B 3 QKLKVAIIGSGNIGTDLMIKVLRN-AKYLEMGAMVGIDAASDGLARAQ--RM----G---VTTT---------------- 56 (312)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHH-CSSEEEEEEECSCTTCHHHHHHH--HT----T---CCEE----------------
T ss_pred CCCEEEEEcCcHHHHHHHHHHHhh-CcCeEEEEEEeCChhhhHHHHHH--Hc----C---CCcc----------------
Confidence 358999999999999999988652 2468999998873 1 122221 11 2 1100
Q ss_pred EecCCCCCC----CCCCCcccEEecCcccccCchhhhHHHHc--CCCEEEEcCCC
Q 025793 162 VSNRDPLQL----PWAELGIDIVIEGTGVFVDGPGAGKHIQA--GAKKVIITAPA 210 (248)
Q Consensus 162 ~~~~dP~~i----~W~~~GidiVVE~TG~F~~~e~a~~HL~~--GAKKVIISAPs 210 (248)
..+.+++ .| .++|+|++|||.....+-+..-+++ |. .|+.-.|.
T Consensus 57 --~~~~e~ll~~~~~--~~iDvV~~atp~~~h~~~a~~al~a~~Gk-~Vi~ekp~ 106 (312)
T 1nvm_B 57 --YAGVEGLIKLPEF--ADIDFVFDATSASAHVQNEALLRQAKPGI-RLIDLTPA 106 (312)
T ss_dssp --SSHHHHHHHSGGG--GGEEEEEECSCHHHHHHHHHHHHHHCTTC-EEEECSTT
T ss_pred --cCCHHHHHhccCC--CCCcEEEECCChHHHHHHHHHHHHhCCCC-EEEEcCcc
Confidence 0111111 12 3799999999976555655565666 53 46655553
No 65
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=95.97 E-value=0.012 Score=52.62 Aligned_cols=93 Identities=27% Similarity=0.383 Sum_probs=61.1
Q ss_pred ceeeEEEeCCChhhHH-HHHHHhhCCCCCeEEEEEeCCCChhhhhhhccccCcCcccCceEEEecCCcEEECCeEEEEEe
Q 025793 85 AKLKVAINGFGRIGRN-FLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVS 163 (248)
Q Consensus 85 ~~vkV~INGFGRIGRl-vlR~~~~~~~~~l~iVaIND~~~~e~~ayLLkYDStHGkf~g~V~v~e~~~L~inGk~I~v~~ 163 (248)
+++||||.|+|+||+. .++++... +.+++++|-|. +.+.+.- .|.+ +. ++
T Consensus 6 ~~~rvgiiG~G~~g~~~~~~~~~~~--~~~~l~av~d~-~~~~~~~---------~~~~-~~---------------~~- 56 (352)
T 3kux_A 6 DKIKVGLLGYGYASKTFHAPLIMGT--PGLELAGVSSS-DASKVHA---------DWPA-IP---------------VV- 56 (352)
T ss_dssp CCEEEEEECCSHHHHHTHHHHHHTS--TTEEEEEEECS-CHHHHHT---------TCSS-CC---------------EE-
T ss_pred CCceEEEECCCHHHHHHHHHHHhhC--CCcEEEEEECC-CHHHHHh---------hCCC-Cc---------------eE-
Confidence 3689999999999996 67776543 46999999988 4444320 1111 11 11
Q ss_pred cCCCCCCCCCCCcccEEecCcccccCchhhhHHHHcCCCEEEEcCC
Q 025793 164 NRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (248)
Q Consensus 164 ~~dP~~i~W~~~GidiVVE~TG~F~~~e~a~~HL~~GAKKVIISAP 209 (248)
.|.+++- .+-.+|+|+.||--....+-+..-|++| |.|++=-|
T Consensus 57 -~~~~~ll-~~~~vD~V~i~tp~~~H~~~~~~al~aG-khV~~EKP 99 (352)
T 3kux_A 57 -SDPQMLF-NDPSIDLIVIPTPNDTHFPLAQSALAAG-KHVVVDKP 99 (352)
T ss_dssp -SCHHHHH-HCSSCCEEEECSCTTTHHHHHHHHHHTT-CEEEECSS
T ss_pred -CCHHHHh-cCCCCCEEEEeCChHHHHHHHHHHHHCC-CcEEEECC
Confidence 1122221 1236899999998877777777778888 67888777
No 66
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=95.92 E-value=0.014 Score=52.03 Aligned_cols=97 Identities=18% Similarity=0.218 Sum_probs=59.8
Q ss_pred ceeeEEEeCCChhhHH-HHHHHhhCCCCCeEEEEEeCCCChhhhhhhccccCcCcccCceEEEecCCcEEECCeEEEEEe
Q 025793 85 AKLKVAINGFGRIGRN-FLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVS 163 (248)
Q Consensus 85 ~~vkV~INGFGRIGRl-vlR~~~~~~~~~l~iVaIND~~~~e~~ayLLkYDStHGkf~g~V~v~e~~~L~inGk~I~v~~ 163 (248)
|++||||.|+|+||+. .++.++.. .+.+++++|-|+. .+.....-+ |.+ +.+ +
T Consensus 1 m~~rvgiiG~G~~g~~~~~~~~~~~-~~~~~l~av~d~~-~~~~~~~~~-------~~~-~~~---------------~- 54 (345)
T 3f4l_A 1 MVINCAFIGFGKSTTRYHLPYVLNR-KDSWHVAHIFRRH-AKPEEQAPI-------YSH-IHF---------------T- 54 (345)
T ss_dssp -CEEEEEECCSHHHHHHTHHHHTTC-TTTEEEEEEECSS-CCGGGGSGG-------GTT-CEE---------------E-
T ss_pred CceEEEEEecCHHHHHHHHHHHHhc-CCCeEEEEEEcCC-HhHHHHHHh-------cCC-Cce---------------E-
Confidence 5689999999999985 66734332 3579999999873 222211111 111 111 1
Q ss_pred cCCCCCCCCCCCcccEEecCcccccCchhhhHHHHcCCCEEEEcCCC
Q 025793 164 NRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPA 210 (248)
Q Consensus 164 ~~dP~~i~W~~~GidiVVE~TG~F~~~e~a~~HL~~GAKKVIISAPs 210 (248)
.|++++- .+-.+|+|+-||--....+-+..-|++| |.|++--|-
T Consensus 55 -~~~~~ll-~~~~~D~V~i~tp~~~h~~~~~~al~aG-k~Vl~EKP~ 98 (345)
T 3f4l_A 55 -SDLDEVL-NDPDVKLVVVCTHADSHFEYAKRALEAG-KNVLVEKPF 98 (345)
T ss_dssp -SCTHHHH-TCTTEEEEEECSCGGGHHHHHHHHHHTT-CEEEECSSS
T ss_pred -CCHHHHh-cCCCCCEEEEcCChHHHHHHHHHHHHcC-CcEEEeCCC
Confidence 1222221 1236899999998877777777778888 677776664
No 67
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=95.92 E-value=0.0084 Score=52.82 Aligned_cols=94 Identities=21% Similarity=0.256 Sum_probs=61.5
Q ss_pred ceeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeCCCChhhhhhhccccCcCcccCceEEEecCCcEEECCeEEEEEec
Q 025793 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (248)
Q Consensus 85 ~~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND~~~~e~~ayLLkYDStHGkf~g~V~v~e~~~L~inGk~I~v~~~ 164 (248)
+++||+|.|+|+||+..++.+... +.+++|+|-|. +.+.+..+.+. +.++
T Consensus 9 ~~~~igiIG~G~~g~~~~~~l~~~--~~~~~v~v~d~-~~~~~~~~~~~-------------------------~~~~-- 58 (315)
T 3c1a_A 9 SPVRLALIGAGRWGKNYIRTIAGL--PGAALVRLASS-NPDNLALVPPG-------------------------CVIE-- 58 (315)
T ss_dssp CCEEEEEEECTTTTTTHHHHHHHC--TTEEEEEEEES-CHHHHTTCCTT-------------------------CEEE--
T ss_pred CcceEEEECCcHHHHHHHHHHHhC--CCcEEEEEEeC-CHHHHHHHHhh-------------------------Cccc--
Confidence 468999999999999999987753 36899999887 33333221110 1111
Q ss_pred CCCCCCCCCCCcccEEecCcccccCchhhhHHHHcCCCEEEEcCCC
Q 025793 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPA 210 (248)
Q Consensus 165 ~dP~~i~W~~~GidiVVE~TG~F~~~e~a~~HL~~GAKKVIISAPs 210 (248)
.+++++- .+.++|+|+.||--....+-+..-|++| |.|++--|.
T Consensus 59 ~~~~~~l-~~~~~D~V~i~tp~~~h~~~~~~al~~G-k~v~~eKP~ 102 (315)
T 3c1a_A 59 SDWRSVV-SAPEVEAVIIATPPATHAEITLAAIASG-KAVLVEKPL 102 (315)
T ss_dssp SSTHHHH-TCTTCCEEEEESCGGGHHHHHHHHHHTT-CEEEEESSS
T ss_pred CCHHHHh-hCCCCCEEEEeCChHHHHHHHHHHHHCC-CcEEEcCCC
Confidence 1222221 1236899999998877667777777877 567776564
No 68
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=95.85 E-value=0.017 Score=52.17 Aligned_cols=94 Identities=23% Similarity=0.231 Sum_probs=62.3
Q ss_pred eeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeCCCChhhhhhhccccCcCcccCceEEEecCCcEEECCeEEEEEecC
Q 025793 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNR 165 (248)
Q Consensus 86 ~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND~~~~e~~ayLLkYDStHGkf~g~V~v~e~~~L~inGk~I~v~~~~ 165 (248)
++||+|.|+|+||+..++.+... +.+++++|-|. +.+.+...-+| |. .+. .
T Consensus 5 ~~~vgiiG~G~~g~~~~~~l~~~--~~~~l~av~d~-~~~~~~~a~~~----g~-----~~~-----------------~ 55 (359)
T 3e18_A 5 KYQLVIVGYGGMGSYHVTLASAA--DNLEVHGVFDI-LAEKREAAAQK----GL-----KIY-----------------E 55 (359)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTS--TTEEEEEEECS-SHHHHHHHHTT----TC-----CBC-----------------S
T ss_pred cCcEEEECcCHHHHHHHHHHHhC--CCcEEEEEEcC-CHHHHHHHHhc----CC-----cee-----------------C
Confidence 58999999999999988876543 46999999987 33433321122 11 110 1
Q ss_pred CCCCCCCCCCcccEEecCcccccCchhhhHHHHcCCCEEEEcCCC
Q 025793 166 DPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPA 210 (248)
Q Consensus 166 dP~~i~W~~~GidiVVE~TG~F~~~e~a~~HL~~GAKKVIISAPs 210 (248)
|++++ ..+.++|+|+-||--....+-+..-|++| |.|++--|-
T Consensus 56 ~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~aG-khVl~EKP~ 98 (359)
T 3e18_A 56 SYEAV-LADEKVDAVLIATPNDSHKELAISALEAG-KHVVCEKPV 98 (359)
T ss_dssp CHHHH-HHCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEEESSC
T ss_pred CHHHH-hcCCCCCEEEEcCCcHHHHHHHHHHHHCC-CCEEeeCCC
Confidence 11111 01236899999999887778788888888 678876663
No 69
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=95.81 E-value=0.012 Score=52.94 Aligned_cols=93 Identities=22% Similarity=0.257 Sum_probs=61.3
Q ss_pred ceeeEEEeCCChhhHH-HHHHHhhCCCCCeEEEEEeCCCChhhhhhhccccCcCcccCceEEEecCCcEEECCeEEEEEe
Q 025793 85 AKLKVAINGFGRIGRN-FLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVS 163 (248)
Q Consensus 85 ~~vkV~INGFGRIGRl-vlR~~~~~~~~~l~iVaIND~~~~e~~ayLLkYDStHGkf~g~V~v~e~~~L~inGk~I~v~~ 163 (248)
.++||||.|+|+||+. .++++.. .+.+++++|-|. +.+..+- + |.+ +.+ +
T Consensus 4 ~~~rvgiiG~G~~g~~~~~~~l~~--~~~~~l~av~d~-~~~~~~~--~-------~~~-~~~---------------~- 54 (358)
T 3gdo_A 4 DTIKVGILGYGLSGSVFHGPLLDV--LDEYQISKIMTS-RTEEVKR--D-------FPD-AEV---------------V- 54 (358)
T ss_dssp TCEEEEEECCSHHHHHTTHHHHTT--CTTEEEEEEECS-CHHHHHH--H-------CTT-SEE---------------E-
T ss_pred CcceEEEEccCHHHHHHHHHHHhh--CCCeEEEEEEcC-CHHHHHh--h-------CCC-Cce---------------E-
Confidence 3589999999999986 6676543 246999999988 3344321 1 111 111 1
Q ss_pred cCCCCCCCCCCCcccEEecCcccccCchhhhHHHHcCCCEEEEcCC
Q 025793 164 NRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (248)
Q Consensus 164 ~~dP~~i~W~~~GidiVVE~TG~F~~~e~a~~HL~~GAKKVIISAP 209 (248)
.|++++ ..+-.+|+|+.||.-....+-+..-|++| |.|++=-|
T Consensus 55 -~~~~~l-l~~~~vD~V~i~tp~~~H~~~~~~al~aG-khVl~EKP 97 (358)
T 3gdo_A 55 -HELEEI-TNDPAIELVIVTTPSGLHYEHTMACIQAG-KHVVMEKP 97 (358)
T ss_dssp -SSTHHH-HTCTTCCEEEECSCTTTHHHHHHHHHHTT-CEEEEESS
T ss_pred -CCHHHH-hcCCCCCEEEEcCCcHHHHHHHHHHHHcC-CeEEEecC
Confidence 122222 11236899999999887778788888888 67887666
No 70
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=95.72 E-value=0.014 Score=52.68 Aligned_cols=98 Identities=29% Similarity=0.300 Sum_probs=63.3
Q ss_pred ceeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeCCCChhhhhhhc-cccCcCcccCceEEEecCCcEEECCeEEEEEe
Q 025793 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLL-KYDSLLGTFKADVKIVDNETISVDGKLIKVVS 163 (248)
Q Consensus 85 ~~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND~~~~e~~ayLL-kYDStHGkf~g~V~v~e~~~L~inGk~I~v~~ 163 (248)
+++||+|.|+|+||+..++.+..+ .+.+++++|-|+. .+.+..+- +| |. .+.+ +
T Consensus 22 ~~~rvgiIG~G~~g~~~~~~l~~~-~~~~~lvav~d~~-~~~~~~~a~~~----g~---~~~~---------------~- 76 (357)
T 3ec7_A 22 MTLKAGIVGIGMIGSDHLRRLANT-VSGVEVVAVCDIV-AGRAQAALDKY----AI---EAKD---------------Y- 76 (357)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHT-CTTEEEEEEECSS-TTHHHHHHHHH----TC---CCEE---------------E-
T ss_pred CeeeEEEECCcHHHHHHHHHHHhh-CCCcEEEEEEeCC-HHHHHHHHHHh----CC---CCee---------------e-
Confidence 568999999999999999987632 2469999999873 22222111 11 10 0111 1
Q ss_pred cCCCCCCCCCCCcccEEecCcccccCchhhhHHHHcCCCEEEEcCCC
Q 025793 164 NRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPA 210 (248)
Q Consensus 164 ~~dP~~i~W~~~GidiVVE~TG~F~~~e~a~~HL~~GAKKVIISAPs 210 (248)
.|++++ -.+-.+|+|+-||--....+-+..-|++| |.|++=-|-
T Consensus 77 -~~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~aG-k~Vl~EKPl 120 (357)
T 3ec7_A 77 -NDYHDL-INDKDVEVVIITASNEAHADVAVAALNAN-KYVFCEKPL 120 (357)
T ss_dssp -SSHHHH-HHCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEEESSS
T ss_pred -CCHHHH-hcCCCCCEEEEcCCcHHHHHHHHHHHHCC-CCEEeecCc
Confidence 111111 01225899999999888888888888888 678877773
No 71
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=95.67 E-value=0.017 Score=52.25 Aligned_cols=94 Identities=18% Similarity=0.341 Sum_probs=61.1
Q ss_pred ceeeEEEeCCChhhHH-HHHHHhhCCCCCeEEEEEeCCCChhhhhhhccccCcCcccCceEEEecCCcEEECCeEEEEEe
Q 025793 85 AKLKVAINGFGRIGRN-FLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVS 163 (248)
Q Consensus 85 ~~vkV~INGFGRIGRl-vlR~~~~~~~~~l~iVaIND~~~~e~~ayLLkYDStHGkf~g~V~v~e~~~L~inGk~I~v~~ 163 (248)
+++||||.|+|+||+. .++++... +.+++++|-|. +.+.+.- .|.+ +.+ +
T Consensus 6 ~~~rvgiiG~G~~g~~~~~~~l~~~--~~~~l~av~d~-~~~~~~~---------~~~~-~~~---------------~- 56 (364)
T 3e82_A 6 NTINIALIGYGFVGKTFHAPLIRSV--PGLNLAFVASR-DEEKVKR---------DLPD-VTV---------------I- 56 (364)
T ss_dssp -CEEEEEECCSHHHHHTHHHHHHTS--TTEEEEEEECS-CHHHHHH---------HCTT-SEE---------------E-
T ss_pred CcceEEEECCCHHHHHHHHHHHhhC--CCeEEEEEEcC-CHHHHHh---------hCCC-CcE---------------E-
Confidence 4689999999999996 67766543 46999999988 3344321 1111 111 1
Q ss_pred cCCCCCCCCCCCcccEEecCcccccCchhhhHHHHcCCCEEEEcCCC
Q 025793 164 NRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPA 210 (248)
Q Consensus 164 ~~dP~~i~W~~~GidiVVE~TG~F~~~e~a~~HL~~GAKKVIISAPs 210 (248)
.|.+++- .+-.+|+|+-||--....+-+..-|++| |-|++--|-
T Consensus 57 -~~~~~ll-~~~~~D~V~i~tp~~~H~~~~~~al~aG-k~Vl~EKPl 100 (364)
T 3e82_A 57 -ASPEAAV-QHPDVDLVVIASPNATHAPLARLALNAG-KHVVVDKPF 100 (364)
T ss_dssp -SCHHHHH-TCTTCSEEEECSCGGGHHHHHHHHHHTT-CEEEECSCS
T ss_pred -CCHHHHh-cCCCCCEEEEeCChHHHHHHHHHHHHCC-CcEEEeCCC
Confidence 1122111 1236899999999887778888888888 668877673
No 72
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=95.66 E-value=0.014 Score=52.27 Aligned_cols=96 Identities=16% Similarity=0.149 Sum_probs=62.4
Q ss_pred ceeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeCCCChhhhhhhccccCcCcccCceEEEecCCcEEECCeEEEEEec
Q 025793 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (248)
Q Consensus 85 ~~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND~~~~e~~ayLLkYDStHGkf~g~V~v~e~~~L~inGk~I~v~~~ 164 (248)
+++||+|.|+|+||+..++.+... +.+++++|-|. +.+.+..+.+. +| ... .
T Consensus 4 ~~~~vgiiG~G~~g~~~~~~l~~~--~~~~lvav~d~-~~~~~~~~~~~---~g---~~~-------------------~ 55 (354)
T 3db2_A 4 NPVGVAAIGLGRWAYVMADAYTKS--EKLKLVTCYSR-TEDKREKFGKR---YN---CAG-------------------D 55 (354)
T ss_dssp CCEEEEEECCSHHHHHHHHHHTTC--SSEEEEEEECS-SHHHHHHHHHH---HT---CCC-------------------C
T ss_pred CcceEEEEccCHHHHHHHHHHHhC--CCcEEEEEECC-CHHHHHHHHHH---cC---CCC-------------------c
Confidence 468999999999999999987543 46999999987 33333222110 11 000 0
Q ss_pred CCCCCCCCCCCcccEEecCcccccCchhhhHHHHcCCCEEEEcCCC
Q 025793 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPA 210 (248)
Q Consensus 165 ~dP~~i~W~~~GidiVVE~TG~F~~~e~a~~HL~~GAKKVIISAPs 210 (248)
.|++++- .+..+|+|+-||--....+-+..-|++| |.|++--|.
T Consensus 56 ~~~~~~l-~~~~~D~V~i~tp~~~h~~~~~~al~~g-k~vl~EKP~ 99 (354)
T 3db2_A 56 ATMEALL-AREDVEMVIITVPNDKHAEVIEQCARSG-KHIYVEKPI 99 (354)
T ss_dssp SSHHHHH-HCSSCCEEEECSCTTSHHHHHHHHHHTT-CEEEEESSS
T ss_pred CCHHHHh-cCCCCCEEEEeCChHHHHHHHHHHHHcC-CEEEEccCC
Confidence 1111110 1236899999999887777777778887 668887773
No 73
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=95.64 E-value=0.012 Score=52.26 Aligned_cols=97 Identities=18% Similarity=0.174 Sum_probs=60.1
Q ss_pred ceeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeCCCChhhhhhhccccCcCcccCceEEEecCCcEEECCeEEEEEec
Q 025793 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (248)
Q Consensus 85 ~~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND~~~~e~~ayLLkYDStHGkf~g~V~v~e~~~L~inGk~I~v~~~ 164 (248)
.++||||.|+|+||+.+++.+... +.+++++|-|.. .+....+.+ .+| .. +++
T Consensus 4 ~~~rigiiG~G~ig~~~~~~l~~~--~~~~~~av~d~~-~~~~~~~a~---~~~---~~----------------~~~-- 56 (329)
T 3evn_A 4 SKVRYGVVSTAKVAPRFIEGVRLA--GNGEVVAVSSRT-LESAQAFAN---KYH---LP----------------KAY-- 56 (329)
T ss_dssp -CEEEEEEBCCTTHHHHHHHHHHH--CSEEEEEEECSC-SSTTCC------CCC---CS----------------CEE--
T ss_pred CceEEEEEechHHHHHHHHHHHhC--CCcEEEEEEcCC-HHHHHHHHH---HcC---CC----------------ccc--
Confidence 358999999999999998887643 468999998872 222211110 011 00 011
Q ss_pred CCCCCCCCCCCcccEEecCcccccCchhhhHHHHcCCCEEEEcCCC
Q 025793 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPA 210 (248)
Q Consensus 165 ~dP~~i~W~~~GidiVVE~TG~F~~~e~a~~HL~~GAKKVIISAPs 210 (248)
.|++++- .+..+|+|+-||--....+-+..-|++| |.|++--|-
T Consensus 57 ~~~~~ll-~~~~~D~V~i~tp~~~h~~~~~~al~aG-k~Vl~EKP~ 100 (329)
T 3evn_A 57 DKLEDML-ADESIDVIYVATINQDHYKVAKAALLAG-KHVLVEKPF 100 (329)
T ss_dssp SCHHHHH-TCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEEESSC
T ss_pred CCHHHHh-cCCCCCEEEECCCcHHHHHHHHHHHHCC-CeEEEccCC
Confidence 1122221 1236899999998877777777778887 568877773
No 74
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=95.56 E-value=0.0094 Score=56.98 Aligned_cols=36 Identities=19% Similarity=0.320 Sum_probs=29.7
Q ss_pred eeeEEEeCCChhhHHHHHHHhhC-------CCCCeEEEEEeCC
Q 025793 86 KLKVAINGFGRIGRNFLRCWHGR-------KDSPLDVVVVNDS 121 (248)
Q Consensus 86 ~vkV~INGFGRIGRlvlR~~~~~-------~~~~l~iVaIND~ 121 (248)
++||+|-|+|.||+.+++.+.++ .+.++++++|-|.
T Consensus 10 ~irIgIIG~G~VG~~~~~~L~~~~~~l~~~~g~~i~lvaV~d~ 52 (444)
T 3mtj_A 10 PIHVGLLGLGTVGGGTLTVLRRNAEEITRRAGREIRVVRAAVR 52 (444)
T ss_dssp CEEEEEECCHHHHHHHHHHHHHTHHHHHHHHSSCEEEEEEECS
T ss_pred cccEEEECCCHHHHHHHHHHHHhHHHHHHhcCCCEEEEEEEEC
Confidence 58999999999999999876532 1357999999987
No 75
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=95.55 E-value=0.014 Score=52.40 Aligned_cols=100 Identities=16% Similarity=0.183 Sum_probs=59.6
Q ss_pred ceeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeCCCChhhhhhhccccCcCcccCceEEEecCCcEEECCeEEEEEec
Q 025793 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (248)
Q Consensus 85 ~~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND~~~~e~~ayLLkYDStHGkf~g~V~v~e~~~L~inGk~I~v~~~ 164 (248)
.++||+|.|+|+||+.+++.+... +.+++++|-|. +.+....+-+ .+|- ...+. ++
T Consensus 5 ~~~~vgiiG~G~ig~~~~~~l~~~--~~~~lv~v~d~-~~~~~~~~a~---~~~~-~~~~~---------------~~-- 60 (362)
T 1ydw_A 5 TQIRIGVMGCADIARKVSRAIHLA--PNATISGVASR-SLEKAKAFAT---ANNY-PESTK---------------IH-- 60 (362)
T ss_dssp -CEEEEEESCCTTHHHHHHHHHHC--TTEEEEEEECS-SHHHHHHHHH---HTTC-CTTCE---------------EE--
T ss_pred CceEEEEECchHHHHHHHHHHhhC--CCcEEEEEEcC-CHHHHHHHHH---HhCC-CCCCe---------------ee--
Confidence 458999999999999999987653 46899999987 3333222111 1110 00011 11
Q ss_pred CCCCCCCCCCCcccEEecCcccccCchhhhHHHHcCCCEEEEcCCC
Q 025793 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPA 210 (248)
Q Consensus 165 ~dP~~i~W~~~GidiVVE~TG~F~~~e~a~~HL~~GAKKVIISAPs 210 (248)
.|++++ ..+..+|+|+.||--....+-+..-|++| |.|++--|.
T Consensus 61 ~~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~aG-k~V~~EKP~ 104 (362)
T 1ydw_A 61 GSYESL-LEDPEIDALYVPLPTSLHVEWAIKAAEKG-KHILLEKPV 104 (362)
T ss_dssp SSHHHH-HHCTTCCEEEECCCGGGHHHHHHHHHTTT-CEEEECSSC
T ss_pred CCHHHH-hcCCCCCEEEEcCChHHHHHHHHHHHHCC-CeEEEecCC
Confidence 111111 01125799999998776666666667776 467776663
No 76
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=95.20 E-value=0.026 Score=50.84 Aligned_cols=94 Identities=18% Similarity=0.280 Sum_probs=61.3
Q ss_pred ceeeEEEeCCChhhHH-HHHHHhhCCCCCeEEEEEeCCCChhhhhhhccccCcCcccCceEEEecCCcEEECCeEEEEEe
Q 025793 85 AKLKVAINGFGRIGRN-FLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVS 163 (248)
Q Consensus 85 ~~vkV~INGFGRIGRl-vlR~~~~~~~~~l~iVaIND~~~~e~~ayLLkYDStHGkf~g~V~v~e~~~L~inGk~I~v~~ 163 (248)
.++||||.|+|+||+. .++++... +.+++++|-|.. .+.++ -+|.+ +. ++
T Consensus 4 ~~~rvgiiG~G~~g~~~~~~~l~~~--~~~~l~av~d~~-~~~~~---------~~~~~-~~---------------~~- 54 (362)
T 3fhl_A 4 EIIKTGLAAFGMSGQVFHAPFISTN--PHFELYKIVERS-KELSK---------ERYPQ-AS---------------IV- 54 (362)
T ss_dssp CCEEEEESCCSHHHHHTTHHHHHHC--TTEEEEEEECSS-CCGGG---------TTCTT-SE---------------EE-
T ss_pred CceEEEEECCCHHHHHHHHHHHhhC--CCeEEEEEEcCC-HHHHH---------HhCCC-Cc---------------eE-
Confidence 4589999999999996 67766543 469999999873 33322 11211 11 11
Q ss_pred cCCCCCCCCCCCcccEEecCcccccCchhhhHHHHcCCCEEEEcCCC
Q 025793 164 NRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPA 210 (248)
Q Consensus 164 ~~dP~~i~W~~~GidiVVE~TG~F~~~e~a~~HL~~GAKKVIISAPs 210 (248)
.|.+++- .+-.+|+|+-||--....+-+..-|++| |.|++=-|-
T Consensus 55 -~~~~~ll-~~~~vD~V~i~tp~~~H~~~~~~al~aG-khVl~EKP~ 98 (362)
T 3fhl_A 55 -RSFKELT-EDPEIDLIVVNTPDNTHYEYAGMALEAG-KNVVVEKPF 98 (362)
T ss_dssp -SCSHHHH-TCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEEESSC
T ss_pred -CCHHHHh-cCCCCCEEEEeCChHHHHHHHHHHHHCC-CeEEEecCC
Confidence 1222221 1236899999999887777777778887 678876673
No 77
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=95.18 E-value=0.03 Score=52.15 Aligned_cols=101 Identities=17% Similarity=0.147 Sum_probs=61.7
Q ss_pred ceeeEEEeCCChhhH-HHHHHHhhCCCCCeEEEEEeCCCChhhhhhhccccCcCcccCceEEEecCCcEEECCeEEEEEe
Q 025793 85 AKLKVAINGFGRIGR-NFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVS 163 (248)
Q Consensus 85 ~~vkV~INGFGRIGR-lvlR~~~~~~~~~l~iVaIND~~~~e~~ayLLkYDStHGkf~g~V~v~e~~~L~inGk~I~v~~ 163 (248)
.++||+|.|+|+||+ .+++.+.. .+.+++|+|-|. +.+....+-+ .||.-...+. +
T Consensus 82 ~~irigiIG~G~~g~~~~~~~l~~--~~~~~lvav~d~-~~~~~~~~a~---~~g~~~~~~~---------------~-- 138 (433)
T 1h6d_A 82 RRFGYAIVGLGKYALNQILPGFAG--CQHSRIEALVSG-NAEKAKIVAA---EYGVDPRKIY---------------D-- 138 (433)
T ss_dssp CCEEEEEECCSHHHHHTHHHHTTT--CSSEEEEEEECS-CHHHHHHHHH---HTTCCGGGEE---------------C--
T ss_pred CceEEEEECCcHHHHHHHHHHHhh--CCCcEEEEEEcC-CHHHHHHHHH---HhCCCccccc---------------c--
Confidence 468999999999997 78887654 246899999987 3333221111 0111000011 1
Q ss_pred cCCCCCCCCCCCcccEEecCcccccCchhhhHHHHcCCCEEEEcCCC
Q 025793 164 NRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPA 210 (248)
Q Consensus 164 ~~dP~~i~W~~~GidiVVE~TG~F~~~e~a~~HL~~GAKKVIISAPs 210 (248)
..|.+++- .+..+|+|+.||--....+-+..-|++| |.|++--|.
T Consensus 139 ~~~~~~ll-~~~~vD~V~iatp~~~h~~~~~~al~aG-k~Vl~EKPl 183 (433)
T 1h6d_A 139 YSNFDKIA-KDPKIDAVYIILPNSLHAEFAIRAFKAG-KHVMCEKPM 183 (433)
T ss_dssp SSSGGGGG-GCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEECSSC
T ss_pred cCCHHHHh-cCCCCCEEEEcCCchhHHHHHHHHHHCC-CcEEEcCCC
Confidence 12233321 1236899999998877777777777877 468776664
No 78
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=95.09 E-value=0.013 Score=53.46 Aligned_cols=99 Identities=20% Similarity=0.205 Sum_probs=61.7
Q ss_pred ceeeEEEeCCChhhHHHHHHHhhCC------CCCeEEEEEeCCCChhhhhhhccccCcCcccCceEEEecCCcEEECCeE
Q 025793 85 AKLKVAINGFGRIGRNFLRCWHGRK------DSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKL 158 (248)
Q Consensus 85 ~~vkV~INGFGRIGRlvlR~~~~~~------~~~l~iVaIND~~~~e~~ayLLkYDStHGkf~g~V~v~e~~~L~inGk~ 158 (248)
.++||||.|+|+||+..++++.... ...+++|+|-|+ +.+.+..+-+ +|... ++..
T Consensus 25 ~klrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~elvav~d~-~~~~a~~~a~------~~~~~-~~y~---------- 86 (412)
T 4gqa_A 25 ARLNIGLIGSGFMGQAHADAYRRAAMFYPDLPKRPHLYALADQ-DQAMAERHAA------KLGAE-KAYG---------- 86 (412)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHHHHHCTTSSSEEEEEEEECS-SHHHHHHHHH------HHTCS-EEES----------
T ss_pred ccceEEEEcCcHHHHHHHHHHHhccccccccCCCeEEEEEEcC-CHHHHHHHHH------HcCCC-eEEC----------
Confidence 4699999999999998877664311 235799999998 3333322211 11111 1100
Q ss_pred EEEEecCCCCCCCCCCCcccEEecCcccccCchhhhHHHHcCCCEEEEcCCC
Q 025793 159 IKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPA 210 (248)
Q Consensus 159 I~v~~~~dP~~i~W~~~GidiVVE~TG~F~~~e~a~~HL~~GAKKVIISAPs 210 (248)
|.+++ ..+-.+|+|+=||--..-.+-+..=|++| |-|++=-|-
T Consensus 87 -------d~~~l-l~~~~vD~V~I~tp~~~H~~~~~~al~aG-khVl~EKP~ 129 (412)
T 4gqa_A 87 -------DWREL-VNDPQVDVVDITSPNHLHYTMAMAAIAAG-KHVYCEKPL 129 (412)
T ss_dssp -------SHHHH-HHCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEEESCS
T ss_pred -------CHHHH-hcCCCCCEEEECCCcHHHHHHHHHHHHcC-CCeEeecCC
Confidence 11111 01235899998998887778888888888 678887774
No 79
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=95.07 E-value=0.026 Score=49.67 Aligned_cols=91 Identities=15% Similarity=0.168 Sum_probs=57.5
Q ss_pred eeeEEEeCCChhhHH-HHHHHhhCCCCCeEEEEEeCCC--ChhhhhhhccccCcCcccCceEEEecCCcEEECCeEEEEE
Q 025793 86 KLKVAINGFGRIGRN-FLRCWHGRKDSPLDVVVVNDSG--GVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVV 162 (248)
Q Consensus 86 ~vkV~INGFGRIGRl-vlR~~~~~~~~~l~iVaIND~~--~~e~~ayLLkYDStHGkf~g~V~v~e~~~L~inGk~I~v~ 162 (248)
++||+|.|+|+||+. +++.+... +.+++++|-|.. ..+.++- +| | .. +
T Consensus 5 ~~~vgiiG~G~~g~~~~~~~l~~~--~~~~lvav~d~~~~~~~~~~~--~~----g---~~--~---------------- 55 (319)
T 1tlt_A 5 KLRIGVVGLGGIAQKAWLPVLAAA--SDWTLQGAWSPTRAKALPICE--SW----R---IP--Y---------------- 55 (319)
T ss_dssp CEEEEEECCSTHHHHTHHHHHHSC--SSEEEEEEECSSCTTHHHHHH--HH----T---CC--B----------------
T ss_pred cceEEEECCCHHHHHHHHHHHHhC--CCeEEEEEECCCHHHHHHHHH--Hc----C---CC--c----------------
Confidence 589999999999996 88876543 468999898862 2222221 11 1 00 0
Q ss_pred ecCCCCCCCCCCCcccEEecCcccccCchhhhHHHHcCCCEEEEcCCC
Q 025793 163 SNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPA 210 (248)
Q Consensus 163 ~~~dP~~i~W~~~GidiVVE~TG~F~~~e~a~~HL~~GAKKVIISAPs 210 (248)
..+++.+ +.++|+|+.||.-....+-+..-|++| |.|++--|.
T Consensus 56 -~~~~~~l---~~~~D~V~i~tp~~~h~~~~~~al~~G-~~v~~eKP~ 98 (319)
T 1tlt_A 56 -ADSLSSL---AASCDAVFVHSSTASHFDVVSTLLNAG-VHVCVDKPL 98 (319)
T ss_dssp -CSSHHHH---HTTCSEEEECSCTTHHHHHHHHHHHTT-CEEEEESSS
T ss_pred -cCcHHHh---hcCCCEEEEeCCchhHHHHHHHHHHcC-CeEEEeCCC
Confidence 1122233 236899999998766666666667776 457765563
No 80
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=94.96 E-value=0.023 Score=50.74 Aligned_cols=97 Identities=21% Similarity=0.223 Sum_probs=63.3
Q ss_pred ceeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeCCCChhhhhhhccccCcCcccCceEEEecCCcEEECCeEEEEEec
Q 025793 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (248)
Q Consensus 85 ~~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND~~~~e~~ayLLkYDStHGkf~g~V~v~e~~~L~inGk~I~v~~~ 164 (248)
+++||+|.|+|+||+..++.+.... +.+++++|-|. +.+.+..+.+. +| +.+.
T Consensus 12 ~~~rvgiiG~G~~g~~~~~~l~~~~-~~~~lvav~d~-~~~~~~~~~~~---~~-----~~~~----------------- 64 (354)
T 3q2i_A 12 RKIRFALVGCGRIANNHFGALEKHA-DRAELIDVCDI-DPAALKAAVER---TG-----ARGH----------------- 64 (354)
T ss_dssp SCEEEEEECCSTTHHHHHHHHHHTT-TTEEEEEEECS-SHHHHHHHHHH---HC-----CEEE-----------------
T ss_pred CcceEEEEcCcHHHHHHHHHHHhCC-CCeEEEEEEcC-CHHHHHHHHHH---cC-----Ccee-----------------
Confidence 4689999999999999998877541 46999999987 33333222111 11 1111
Q ss_pred CCCCCCCCCCCcccEEecCcccccCchhhhHHHHcCCCEEEEcCCC
Q 025793 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPA 210 (248)
Q Consensus 165 ~dP~~i~W~~~GidiVVE~TG~F~~~e~a~~HL~~GAKKVIISAPs 210 (248)
.|++++ ..+.++|+|+-||--....+-+..-|++| |.|++--|-
T Consensus 65 ~~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~~g-k~v~~EKP~ 108 (354)
T 3q2i_A 65 ASLTDM-LAQTDADIVILTTPSGLHPTQSIECSEAG-FHVMTEKPM 108 (354)
T ss_dssp SCHHHH-HHHCCCSEEEECSCGGGHHHHHHHHHHTT-CEEEECSSS
T ss_pred CCHHHH-hcCCCCCEEEECCCcHHHHHHHHHHHHCC-CCEEEeCCC
Confidence 112221 01236899999998887777777778887 678876673
No 81
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=94.89 E-value=0.033 Score=48.74 Aligned_cols=93 Identities=12% Similarity=0.105 Sum_probs=60.0
Q ss_pred eeeEEEeCCChhhHH-HHHHHhhCCCCCeEEEEEeCCCChhhhhhhccccCcCcccCceEEEecCCcEEECCeEEEEEec
Q 025793 86 KLKVAINGFGRIGRN-FLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (248)
Q Consensus 86 ~vkV~INGFGRIGRl-vlR~~~~~~~~~l~iVaIND~~~~e~~ayLLkYDStHGkf~g~V~v~e~~~L~inGk~I~v~~~ 164 (248)
++||+|.|+|+||+. .++.+... +.+++++|-|. +.+.+..+-+. || ... .
T Consensus 6 ~~~igiIG~G~~g~~~~~~~l~~~--~~~~l~av~d~-~~~~~~~~a~~---~~---~~~-------------------~ 57 (308)
T 3uuw_A 6 NIKMGMIGLGSIAQKAYLPILTKS--ERFEFVGAFTP-NKVKREKICSD---YR---IMP-------------------F 57 (308)
T ss_dssp CCEEEEECCSHHHHHHTHHHHTSC--SSSEEEEEECS-CHHHHHHHHHH---HT---CCB-------------------C
T ss_pred cCcEEEEecCHHHHHHHHHHHHhC--CCeEEEEEECC-CHHHHHHHHHH---cC---CCC-------------------c
Confidence 589999999999996 78876542 46899999987 33333222111 11 000 0
Q ss_pred CCCCCCCCCCCcccEEecCcccccCchhhhHHHHcCCCEEEEcCCC
Q 025793 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPA 210 (248)
Q Consensus 165 ~dP~~i~W~~~GidiVVE~TG~F~~~e~a~~HL~~GAKKVIISAPs 210 (248)
.|++++- + .+|+|+-||--....+-+..-|++| |.|++--|.
T Consensus 58 ~~~~~ll--~-~~D~V~i~tp~~~h~~~~~~al~~g-k~vl~EKP~ 99 (308)
T 3uuw_A 58 DSIESLA--K-KCDCIFLHSSTETHYEIIKILLNLG-VHVYVDKPL 99 (308)
T ss_dssp SCHHHHH--T-TCSEEEECCCGGGHHHHHHHHHHTT-CEEEECSSS
T ss_pred CCHHHHH--h-cCCEEEEeCCcHhHHHHHHHHHHCC-CcEEEcCCC
Confidence 1122211 1 6899999999887777777778887 458776664
No 82
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=94.84 E-value=0.058 Score=47.54 Aligned_cols=95 Identities=19% Similarity=0.251 Sum_probs=56.7
Q ss_pred ceeeEEEeCCChhhH-HHHHHHhhCCCCCeEEEEEeCCCChhhhhhhccccCcCcccCceEEEecCCcEEECCeEEEEEe
Q 025793 85 AKLKVAINGFGRIGR-NFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVS 163 (248)
Q Consensus 85 ~~vkV~INGFGRIGR-lvlR~~~~~~~~~l~iVaIND~~~~e~~ayLLkYDStHGkf~g~V~v~e~~~L~inGk~I~v~~ 163 (248)
|++||+|.|+|+||+ ..++.+... +.++++ |-|. +.+.+..+.+. +| ... ..
T Consensus 1 m~~~igiIG~G~ig~~~~~~~l~~~--~~~~l~-v~d~-~~~~~~~~a~~---~g---~~~-----------------~~ 53 (323)
T 1xea_A 1 MSLKIAMIGLGDIAQKAYLPVLAQW--PDIELV-LCTR-NPKVLGTLATR---YR---VSA-----------------TC 53 (323)
T ss_dssp -CEEEEEECCCHHHHHTHHHHHTTS--TTEEEE-EECS-CHHHHHHHHHH---TT---CCC-----------------CC
T ss_pred CCcEEEEECCCHHHHHHHHHHHHhC--CCceEE-EEeC-CHHHHHHHHHH---cC---CCc-----------------cc
Confidence 468999999999998 488877543 468988 8887 33333222110 11 000 00
Q ss_pred cCCCCCCCCCCCcccEEecCcccccCchhhhHHHHcCCCEEEEcCCC
Q 025793 164 NRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPA 210 (248)
Q Consensus 164 ~~dP~~i~W~~~GidiVVE~TG~F~~~e~a~~HL~~GAKKVIISAPs 210 (248)
..+.+.+ +..+|+|+.||.-....+-+..-|++| |.|++--|.
T Consensus 54 ~~~~~~l---~~~~D~V~i~tp~~~h~~~~~~al~~G-k~V~~EKP~ 96 (323)
T 1xea_A 54 TDYRDVL---QYGVDAVMIHAATDVHSTLAAFFLHLG-IPTFVDKPL 96 (323)
T ss_dssp SSTTGGG---GGCCSEEEECSCGGGHHHHHHHHHHTT-CCEEEESCS
T ss_pred cCHHHHh---hcCCCEEEEECCchhHHHHHHHHHHCC-CeEEEeCCC
Confidence 1112222 247899999998776666666667776 347665553
No 83
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=94.71 E-value=0.042 Score=51.06 Aligned_cols=103 Identities=19% Similarity=0.206 Sum_probs=63.3
Q ss_pred ceeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeCCCChhhhhhhcc-ccCcCcccCceEEEecCCcEEECCeEEEEEe
Q 025793 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLK-YDSLLGTFKADVKIVDNETISVDGKLIKVVS 163 (248)
Q Consensus 85 ~~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND~~~~e~~ayLLk-YDStHGkf~g~V~v~e~~~L~inGk~I~v~~ 163 (248)
+++||+|.|+|+||+..++.+... +.+++|+|-|. +.+.+..+.+ +. .||. + .+. ++.
T Consensus 19 ~~~rvgiIG~G~~g~~h~~~l~~~--~~~~lvav~d~-~~~~~~~~a~~~~-~~g~-~-~~~---------------~~~ 77 (444)
T 2ixa_A 19 KKVRIAFIAVGLRGQTHVENMARR--DDVEIVAFADP-DPYMVGRAQEILK-KNGK-K-PAK---------------VFG 77 (444)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHTC--TTEEEEEEECS-CHHHHHHHHHHHH-HTTC-C-CCE---------------EEC
T ss_pred CCceEEEEecCHHHHHHHHHHHhC--CCcEEEEEEeC-CHHHHHHHHHHHH-hcCC-C-CCc---------------eec
Confidence 468999999999999988877643 46999999998 3333322211 00 0110 0 011 111
Q ss_pred --cCCCCCCCCCCCcccEEecCcccccCchhhhHHHHcCCCEEEEcCCC
Q 025793 164 --NRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPA 210 (248)
Q Consensus 164 --~~dP~~i~W~~~GidiVVE~TG~F~~~e~a~~HL~~GAKKVIISAPs 210 (248)
..|++++ ..+..+|+|+.||--....+-+..-|++| |-|++--|.
T Consensus 78 ~~~~~~~~l-l~~~~vD~V~i~tp~~~h~~~~~~al~aG-khV~~EKP~ 124 (444)
T 2ixa_A 78 NGNDDYKNM-LKDKNIDAVFVSSPWEWHHEHGVAAMKAG-KIVGMEVSG 124 (444)
T ss_dssp SSTTTHHHH-TTCTTCCEEEECCCGGGHHHHHHHHHHTT-CEEEECCCC
T ss_pred cCCCCHHHH-hcCCCCCEEEEcCCcHHHHHHHHHHHHCC-CeEEEeCCC
Confidence 1122222 11236899999999887777777778877 467775563
No 84
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=94.55 E-value=0.034 Score=49.72 Aligned_cols=98 Identities=19% Similarity=0.207 Sum_probs=62.8
Q ss_pred ceeeEEEeCCC-hhhHHHHHHHhhCCCCCeEEEEEeCCCChhhhhhhccccCcCcccCceEEEecCCcEEECCeEEEEEe
Q 025793 85 AKLKVAINGFG-RIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVS 163 (248)
Q Consensus 85 ~~vkV~INGFG-RIGRlvlR~~~~~~~~~l~iVaIND~~~~e~~ayLLkYDStHGkf~g~V~v~e~~~L~inGk~I~v~~ 163 (248)
.++||||.|+| .+|+..++.+... .+.+++|+|-|+ +.+....+-+. || . ..+ +
T Consensus 17 ~~irvgiIG~G~~~g~~~~~~l~~~-~~~~~lvav~d~-~~~~~~~~a~~---~~---~-~~~---------------~- 71 (340)
T 1zh8_A 17 RKIRLGIVGCGIAARELHLPALKNL-SHLFEITAVTSR-TRSHAEEFAKM---VG---N-PAV---------------F- 71 (340)
T ss_dssp CCEEEEEECCSHHHHHTHHHHHHTT-TTTEEEEEEECS-SHHHHHHHHHH---HS---S-CEE---------------E-
T ss_pred CceeEEEEecCHHHHHHHHHHHHhC-CCceEEEEEEcC-CHHHHHHHHHH---hC---C-Ccc---------------c-
Confidence 56899999999 8999888877542 246999999998 34433222111 11 1 011 1
Q ss_pred cCCCCCCCCCCCcccEEecCcccccCchhhhHHHHcCCCEEEEcCCC
Q 025793 164 NRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPA 210 (248)
Q Consensus 164 ~~dP~~i~W~~~GidiVVE~TG~F~~~e~a~~HL~~GAKKVIISAPs 210 (248)
.|.+++ ..+..+|+|+.||--..-.+-+..-|++| |-|++=-|-
T Consensus 72 -~~~~~l-l~~~~vD~V~i~tp~~~H~~~~~~al~aG-khVl~EKPl 115 (340)
T 1zh8_A 72 -DSYEEL-LESGLVDAVDLTLPVELNLPFIEKALRKG-VHVICEKPI 115 (340)
T ss_dssp -SCHHHH-HHSSCCSEEEECCCGGGHHHHHHHHHHTT-CEEEEESSS
T ss_pred -CCHHHH-hcCCCCCEEEEeCCchHHHHHHHHHHHCC-CcEEEeCCC
Confidence 011111 01236899999998877777777788888 578887673
No 85
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=94.55 E-value=0.034 Score=50.16 Aligned_cols=96 Identities=15% Similarity=0.239 Sum_probs=60.9
Q ss_pred eeeEEEeCCChhhHH-HHHHHhhCCCCCeEEEEEeCCCChhhhhhhccccCcCcccCceEEEecCCcEEECCeEEEEEec
Q 025793 86 KLKVAINGFGRIGRN-FLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (248)
Q Consensus 86 ~vkV~INGFGRIGRl-vlR~~~~~~~~~l~iVaIND~~~~e~~ayLLkYDStHGkf~g~V~v~e~~~L~inGk~I~v~~~ 164 (248)
++||||.|+|+||+. .++++... +.+++++|-|+ +.+.+..+-+. |.+ +.+ +
T Consensus 5 ~~rigiIG~G~~g~~~~~~~l~~~--~~~~l~av~d~-~~~~~~~~a~~------~~~-~~~---------------~-- 57 (359)
T 3m2t_A 5 LIKVGLVGIGAQMQENLLPSLLQM--QDIRIVAACDS-DLERARRVHRF------ISD-IPV---------------L-- 57 (359)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTC--TTEEEEEEECS-SHHHHGGGGGT------SCS-CCE---------------E--
T ss_pred cceEEEECCCHHHHHHHHHHHHhC--CCcEEEEEEcC-CHHHHHHHHHh------cCC-Ccc---------------c--
Confidence 589999999999985 78877543 46999999988 44433322211 111 011 0
Q ss_pred CCCCCCCCCCCcccEEecCcccccCchhhhHHHHcCCCEEEEcCCC
Q 025793 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPA 210 (248)
Q Consensus 165 ~dP~~i~W~~~GidiVVE~TG~F~~~e~a~~HL~~GAKKVIISAPs 210 (248)
.|++++- .+..+|+|+-||--....+-+..-|++| |.|++--|-
T Consensus 58 ~~~~~ll-~~~~vD~V~i~tp~~~H~~~~~~al~aG-khVl~EKPl 101 (359)
T 3m2t_A 58 DNVPAML-NQVPLDAVVMAGPPQLHFEMGLLAMSKG-VNVFVEKPP 101 (359)
T ss_dssp SSHHHHH-HHSCCSEEEECSCHHHHHHHHHHHHHTT-CEEEECSCS
T ss_pred CCHHHHh-cCCCCCEEEEcCCcHHHHHHHHHHHHCC-CeEEEECCC
Confidence 1121110 1236799999998877777777777877 568876674
No 86
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=94.53 E-value=0.038 Score=48.48 Aligned_cols=94 Identities=18% Similarity=0.184 Sum_probs=56.9
Q ss_pred eeEEEeCCChhhHHH-HHHHhhCCCCCeEEEEEeCCCChhhhhhhccccCcCcccCceEEEecCCcEEECCeEEEEEecC
Q 025793 87 LKVAINGFGRIGRNF-LRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNR 165 (248)
Q Consensus 87 vkV~INGFGRIGRlv-lR~~~~~~~~~l~iVaIND~~~~e~~ayLLkYDStHGkf~g~V~v~e~~~L~inGk~I~v~~~~ 165 (248)
+||+|.|+|+||+.. ++.+.. ..+++++|-|. +.+....+-+. +|. . .+ ..
T Consensus 1 ~~vgiiG~G~~g~~~~~~~l~~---~~~~~vav~d~-~~~~~~~~~~~---~g~---~-~~-----------------~~ 52 (332)
T 2glx_A 1 NRWGLIGASTIAREWVIGAIRA---TGGEVVSMMST-SAERGAAYATE---NGI---G-KS-----------------VT 52 (332)
T ss_dssp CEEEEESCCHHHHHTHHHHHHH---TTCEEEEEECS-CHHHHHHHHHH---TTC---S-CC-----------------BS
T ss_pred CeEEEEcccHHHHHhhhHHhhc---CCCeEEEEECC-CHHHHHHHHHH---cCC---C-cc-----------------cC
Confidence 489999999999987 777665 35899999887 33333222110 111 0 00 01
Q ss_pred CCCCCCCCCCcccEEecCcccccCchhhhHHHHcCCCEEEEcCCC
Q 025793 166 DPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPA 210 (248)
Q Consensus 166 dP~~i~W~~~GidiVVE~TG~F~~~e~a~~HL~~GAKKVIISAPs 210 (248)
|++++ ..+.++|+|+.||.-....+-+..-|++| |.|++--|.
T Consensus 53 ~~~~~-l~~~~~D~V~i~tp~~~h~~~~~~al~~G-k~v~~ekP~ 95 (332)
T 2glx_A 53 SVEEL-VGDPDVDAVYVSTTNELHREQTLAAIRAG-KHVLCEKPL 95 (332)
T ss_dssp CHHHH-HTCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEECSSS
T ss_pred CHHHH-hcCCCCCEEEEeCChhHhHHHHHHHHHCC-CeEEEeCCC
Confidence 11111 01125899999998776667677777777 567776564
No 87
>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, themophilus; HET: NAD; 2.16A {Thermus thermophilus} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*
Probab=94.29 E-value=0.063 Score=46.25 Aligned_cols=96 Identities=21% Similarity=0.186 Sum_probs=62.4
Q ss_pred eeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeCCCChhhhhhhccccCcCcccCceEEEecCCcEEECCeEEEEEecC
Q 025793 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNR 165 (248)
Q Consensus 86 ~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND~~~~e~~ayLLkYDStHGkf~g~V~v~e~~~L~inGk~I~v~~~~ 165 (248)
..+|+|.|.|++|+.++|.... .. .+++|++-|. +.+.. |+ .++|.+| ..-.
T Consensus 80 ~~rV~IIGaG~~G~~la~~~~~-~~-g~~iVg~~D~-dp~k~----------g~-------------~i~gv~V--~~~~ 131 (211)
T 2dt5_A 80 KWGLCIVGMGRLGSALADYPGF-GE-SFELRGFFDV-DPEKV----------GR-------------PVRGGVI--EHVD 131 (211)
T ss_dssp CEEEEEECCSHHHHHHHHCSCC-CS-SEEEEEEEES-CTTTT----------TC-------------EETTEEE--EEGG
T ss_pred CCEEEEECccHHHHHHHHhHhh-cC-CcEEEEEEeC-CHHHH----------hh-------------hhcCCee--ecHH
Confidence 3689999999999999996332 24 7999999876 22221 11 1334333 3333
Q ss_pred CCCCCCCCCCcccEEecCcccccCchhhhHHHHcCCCEEEEcCCCC
Q 025793 166 DPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAK 211 (248)
Q Consensus 166 dP~~i~W~~~GidiVVE~TG~F~~~e~a~~HL~~GAKKVIISAPsk 211 (248)
+..++ -.+ ++|.|+-|+......+-+..-+++|.+-|+.-+|..
T Consensus 132 dl~el-l~~-~ID~ViIA~Ps~~~~ei~~~l~~aGi~~Ilnf~P~~ 175 (211)
T 2dt5_A 132 LLPQR-VPG-RIEIALLTVPREAAQKAADLLVAAGIKGILNFAPVV 175 (211)
T ss_dssp GHHHH-STT-TCCEEEECSCHHHHHHHHHHHHHHTCCEEEECSSSC
T ss_pred hHHHH-HHc-CCCEEEEeCCchhHHHHHHHHHHcCCCEEEECCccc
Confidence 33322 135 899999999877655555555667988888878863
No 88
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=94.02 E-value=0.043 Score=49.30 Aligned_cols=94 Identities=17% Similarity=0.231 Sum_probs=60.8
Q ss_pred eeeEEEeCCChhhH-HHHHHHhhCCCCCeEEEEEeCCCChhhhhhhccccCcCcccCceEEEecCCcEEECCeEEEEEec
Q 025793 86 KLKVAINGFGRIGR-NFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (248)
Q Consensus 86 ~vkV~INGFGRIGR-lvlR~~~~~~~~~l~iVaIND~~~~e~~ayLLkYDStHGkf~g~V~v~e~~~L~inGk~I~v~~~ 164 (248)
++||||.|+|+||+ ..++.+... +.+++++|-|. +.+....+-+ +|.... +
T Consensus 27 ~~rigiIG~G~~g~~~~~~~l~~~--~~~~l~av~d~-~~~~~~~~a~------~~g~~~-----------------~-- 78 (350)
T 3rc1_A 27 PIRVGVIGCADIAWRRALPALEAE--PLTEVTAIASR-RWDRAKRFTE------RFGGEP-----------------V-- 78 (350)
T ss_dssp CEEEEEESCCHHHHHTHHHHHHHC--TTEEEEEEEES-SHHHHHHHHH------HHCSEE-----------------E--
T ss_pred ceEEEEEcCcHHHHHHHHHHHHhC--CCeEEEEEEcC-CHHHHHHHHH------HcCCCC-----------------c--
Confidence 58999999999998 688877653 46999999887 3333322211 111111 1
Q ss_pred CCCCCCCCCCCcccEEecCcccccCchhhhHHHHcCCCEEEEcCC
Q 025793 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (248)
Q Consensus 165 ~dP~~i~W~~~GidiVVE~TG~F~~~e~a~~HL~~GAKKVIISAP 209 (248)
.+++++- .+..+|+|+-||--....+-+..-|++| |.|++=-|
T Consensus 79 ~~~~~ll-~~~~~D~V~i~tp~~~h~~~~~~al~aG-k~Vl~EKP 121 (350)
T 3rc1_A 79 EGYPALL-ERDDVDAVYVPLPAVLHAEWIDRALRAG-KHVLAEKP 121 (350)
T ss_dssp ESHHHHH-TCTTCSEEEECCCGGGHHHHHHHHHHTT-CEEEEESS
T ss_pred CCHHHHh-cCCCCCEEEECCCcHHHHHHHHHHHHCC-CcEEEeCC
Confidence 1222221 1236899999998887777777778887 45877666
No 89
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=93.90 E-value=0.061 Score=48.01 Aligned_cols=34 Identities=29% Similarity=0.443 Sum_probs=29.7
Q ss_pred eeeEEEeC-CChhhHHHHHHHhhCCCCCeEEEEEeCC
Q 025793 86 KLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (248)
Q Consensus 86 ~vkV~ING-FGRIGRlvlR~~~~~~~~~l~iVaIND~ 121 (248)
++||+|.| +||+||.++|++.+. +++++|++-|.
T Consensus 7 mikV~V~Ga~G~MG~~i~~~l~~~--~~~eLv~~~d~ 41 (272)
T 4f3y_A 7 SMKIAIAGASGRMGRMLIEAVLAA--PDATLVGALDR 41 (272)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHHC--TTEEEEEEBCC
T ss_pred ccEEEEECCCCHHHHHHHHHHHhC--CCCEEEEEEEe
Confidence 48999999 999999999998764 57999998775
No 90
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=93.77 E-value=0.052 Score=49.38 Aligned_cols=95 Identities=15% Similarity=0.176 Sum_probs=61.3
Q ss_pred ceeeEEEeCCC-hhhHHHHHHHhhCCCCCeEEEEEeCCCChhhhhhhc-cccCcCcccCceEEEecCCcEEECCeEEEEE
Q 025793 85 AKLKVAINGFG-RIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLL-KYDSLLGTFKADVKIVDNETISVDGKLIKVV 162 (248)
Q Consensus 85 ~~vkV~INGFG-RIGRlvlR~~~~~~~~~l~iVaIND~~~~e~~ayLL-kYDStHGkf~g~V~v~e~~~L~inGk~I~v~ 162 (248)
|++||||.|+| ++|+..++.+... +.+++++|-|+ +.+....+- +| | ..+-
T Consensus 1 ~~~rigiiG~G~~~~~~~~~~l~~~--~~~~l~av~d~-~~~~~~~~a~~~----g---~~~~----------------- 53 (387)
T 3moi_A 1 MKIRFGICGLGFAGSVLMAPAMRHH--PDAQIVAACDP-NEDVRERFGKEY----G---IPVF----------------- 53 (387)
T ss_dssp CCEEEEEECCSHHHHTTHHHHHHHC--TTEEEEEEECS-CHHHHHHHHHHH----T---CCEE-----------------
T ss_pred CceEEEEEeCCHHHHHHHHHHHHhC--CCeEEEEEEeC-CHHHHHHHHHHc----C---CCeE-----------------
Confidence 46899999999 9999888887653 46999999998 333322111 12 1 1110
Q ss_pred ecCCCCCCCCCCCcccEEecCcccccCchhhhHHHHcCCCEEEEcCCC
Q 025793 163 SNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPA 210 (248)
Q Consensus 163 ~~~dP~~i~W~~~GidiVVE~TG~F~~~e~a~~HL~~GAKKVIISAPs 210 (248)
.|.+++- .+-.+|+|+-||--....+-+..-|++| |.|++--|-
T Consensus 54 --~~~~ell-~~~~vD~V~i~tp~~~H~~~~~~al~aG-k~Vl~EKP~ 97 (387)
T 3moi_A 54 --ATLAEMM-QHVQMDAVYIASPHQFHCEHVVQASEQG-LHIIVEKPL 97 (387)
T ss_dssp --SSHHHHH-HHSCCSEEEECSCGGGHHHHHHHHHHTT-CEEEECSCC
T ss_pred --CCHHHHH-cCCCCCEEEEcCCcHHHHHHHHHHHHCC-CceeeeCCc
Confidence 1111110 1125899999998877777777777887 678876673
No 91
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=93.10 E-value=0.091 Score=45.64 Aligned_cols=96 Identities=20% Similarity=0.227 Sum_probs=61.7
Q ss_pred eeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeCCCChh-hhhhhccccCcCcc-cCceEEEecCCcEEECCeEEEEEe
Q 025793 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVK-NASHLLKYDSLLGT-FKADVKIVDNETISVDGKLIKVVS 163 (248)
Q Consensus 86 ~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND~~~~e-~~ayLLkYDStHGk-f~g~V~v~e~~~L~inGk~I~v~~ 163 (248)
..+|+|+|.|++|+.++|... .....+++|++=|. |++ .. |+ . ++|- +|..
T Consensus 84 ~~~V~IvGaG~lG~aLa~~~~-~~~~g~~iVg~~D~-dp~~ki----------G~~~-------------i~Gv--pV~~ 136 (212)
T 3keo_A 84 TTNVMLVGCGNIGRALLHYRF-HDRNKMQISMAFDL-DSNDLV----------GKTT-------------EDGI--PVYG 136 (212)
T ss_dssp CEEEEEECCSHHHHHHTTCCC-CTTSSEEEEEEEEC-TTSTTT----------TCBC-------------TTCC--BEEE
T ss_pred CCEEEEECcCHHHHHHHHhhh-cccCCeEEEEEEeC-Cchhcc----------Ccee-------------ECCe--EEeC
Confidence 358999999999999988642 22357999998776 222 21 22 1 1232 2332
Q ss_pred cCCCCCCCC--CCCcccEEecCcccccCchhhhHHHHcCCCEEEEcCCCC
Q 025793 164 NRDPLQLPW--AELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAK 211 (248)
Q Consensus 164 ~~dP~~i~W--~~~GidiVVE~TG~F~~~e~a~~HL~~GAKKVIISAPsk 211 (248)
- ++++. .++++|.+|-|+-.-...+-+..-.++|.|-++--||..
T Consensus 137 ~---~dL~~~v~~~~Id~vIIAvPs~~aq~v~d~lv~~GIk~I~nFap~~ 183 (212)
T 3keo_A 137 I---STINDHLIDSDIETAILTVPSTEAQEVADILVKAGIKGILSFSPVH 183 (212)
T ss_dssp G---GGHHHHC-CCSCCEEEECSCGGGHHHHHHHHHHHTCCEEEECSSSC
T ss_pred H---HHHHHHHHHcCCCEEEEecCchhHHHHHHHHHHcCCCEEEEcCCcc
Confidence 2 22322 456899999998665444555555668999999999963
No 92
>1ebf_A Homoserine dehydrogenase; dinucleotide, NAD, dimer, oxidoreductase; HET: NAD; 2.30A {Saccharomyces cerevisiae} SCOP: c.2.1.3 d.81.1.2 PDB: 1ebu_A* 1tve_A* 1q7g_A*
Probab=92.85 E-value=0.12 Score=47.62 Aligned_cols=37 Identities=24% Similarity=0.408 Sum_probs=30.9
Q ss_pred ceeeEEEeCCChhhHHHHHHHhhCC-CCCeEEEEEeCC
Q 025793 85 AKLKVAINGFGRIGRNFLRCWHGRK-DSPLDVVVVNDS 121 (248)
Q Consensus 85 ~~vkV~INGFGRIGRlvlR~~~~~~-~~~l~iVaIND~ 121 (248)
+++||+|.|||.||+.+++.+.... +.++++++|-|.
T Consensus 3 k~i~vgIiG~G~VG~~~~~~l~~~~~g~~~~vvaV~d~ 40 (358)
T 1ebf_A 3 KVVNVAVIGAGVVGSAFLDQLLAMKSTITYNLVLLAEA 40 (358)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHCCCSSEEEEEEEECS
T ss_pred ceEEEEEEecCHHHHHHHHHHHhcCCCCCEEEEEEEEC
Confidence 5689999999999999999887653 235899999885
No 93
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=92.57 E-value=0.22 Score=44.01 Aligned_cols=93 Identities=16% Similarity=0.163 Sum_probs=56.3
Q ss_pred eeeEEEeCCChhhH-HHHHHHhhCCCCCeEEEEEeCCC--ChhhhhhhccccCcCcccCceEEEecCCcEEECCeEEEEE
Q 025793 86 KLKVAINGFGRIGR-NFLRCWHGRKDSPLDVVVVNDSG--GVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVV 162 (248)
Q Consensus 86 ~vkV~INGFGRIGR-lvlR~~~~~~~~~l~iVaIND~~--~~e~~ayLLkYDStHGkf~g~V~v~e~~~L~inGk~I~v~ 162 (248)
++||||.|+|++|. .+++.+.. ..+++|+|-|.. ..+.++- +| | + +++
T Consensus 4 ~~rvgiiG~G~~~~~~~~~~l~~---~~~~lvav~d~~~~~~~~~a~--~~----~---~-~~~---------------- 54 (336)
T 2p2s_A 4 KIRFAAIGLAHNHIYDMCQQLID---AGAELAGVFESDSDNRAKFTS--LF----P---S-VPF---------------- 54 (336)
T ss_dssp CCEEEEECCSSTHHHHHHHHHHH---TTCEEEEEECSCTTSCHHHHH--HS----T---T-CCB----------------
T ss_pred ccEEEEECCChHHHHHhhhhhcC---CCcEEEEEeCCCHHHHHHHHH--hc----C---C-Ccc----------------
Confidence 58999999999996 46665532 368999999872 2222221 12 1 0 000
Q ss_pred ecCCCCCCCCCCCcccEEecCcccccCchhhhHHHHcCCCEEEEcCCC
Q 025793 163 SNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPA 210 (248)
Q Consensus 163 ~~~dP~~i~W~~~GidiVVE~TG~F~~~e~a~~HL~~GAKKVIISAPs 210 (248)
..|++++ ..+..+|+|+-||--....+-+..-|++| |-|++=-|.
T Consensus 55 -~~~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~aG-khVl~EKP~ 99 (336)
T 2p2s_A 55 -AASAEQL-ITDASIDLIACAVIPCDRAELALRTLDAG-KDFFTAKPP 99 (336)
T ss_dssp -CSCHHHH-HTCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEECSSC
T ss_pred -cCCHHHH-hhCCCCCEEEEeCChhhHHHHHHHHHHCC-CcEEEeCCC
Confidence 0111111 01236899999998777777777777777 457776664
No 94
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=92.51 E-value=0.16 Score=44.73 Aligned_cols=37 Identities=16% Similarity=0.347 Sum_probs=28.5
Q ss_pred ceeeEEEeCCChhhHHHHHHHhhC-----CCCCeEEEEEeCC
Q 025793 85 AKLKVAINGFGRIGRNFLRCWHGR-----KDSPLDVVVVNDS 121 (248)
Q Consensus 85 ~~vkV~INGFGRIGRlvlR~~~~~-----~~~~l~iVaIND~ 121 (248)
+|+||||.|+|+||+.-++++... ..+.+++|+|-|+
T Consensus 24 kkirvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~ 65 (393)
T 4fb5_A 24 KPLGIGLIGTGYMGKCHALAWNAVKTVFGDVERPRLVHLAEA 65 (393)
T ss_dssp CCCEEEEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC
T ss_pred CCccEEEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEEEECC
Confidence 469999999999999777764321 1246899999997
No 95
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=92.40 E-value=0.2 Score=44.30 Aligned_cols=35 Identities=17% Similarity=0.281 Sum_probs=27.9
Q ss_pred ceeeEEEeCCChhhHH-HHHHHhhCCCCCeEEEEEeCC
Q 025793 85 AKLKVAINGFGRIGRN-FLRCWHGRKDSPLDVVVVNDS 121 (248)
Q Consensus 85 ~~vkV~INGFGRIGRl-vlR~~~~~~~~~l~iVaIND~ 121 (248)
.++||||.|+|+||+. +++++.. .+.+++|+|-|+
T Consensus 22 ~mirigiIG~G~ig~~~~~~~~~~--~~~~~lvav~d~ 57 (350)
T 4had_A 22 SMLRFGIISTAKIGRDNVVPAIQD--AENCVVTAIASR 57 (350)
T ss_dssp CCEEEEEESCCHHHHHTHHHHHHH--CSSEEEEEEECS
T ss_pred CccEEEEEcChHHHHHHHHHHHHh--CCCeEEEEEECC
Confidence 3589999999999985 4566544 246999999998
No 96
>3ing_A Homoserine dehydrogenase; NP_394635.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: NDP; 1.95A {Thermoplasma acidophilum}
Probab=92.21 E-value=0.12 Score=47.18 Aligned_cols=37 Identities=30% Similarity=0.486 Sum_probs=30.3
Q ss_pred ceeeEEEeCCChhhHHHHHHHhhC----CCCCeEEEEEeCC
Q 025793 85 AKLKVAINGFGRIGRNFLRCWHGR----KDSPLDVVVVNDS 121 (248)
Q Consensus 85 ~~vkV~INGFGRIGRlvlR~~~~~----~~~~l~iVaIND~ 121 (248)
+++||+|.|+|.||+.++|.+.++ .+.++++++|-|.
T Consensus 3 k~irVgIiG~G~VG~~~~~~L~~~~~~~~g~~l~lvaVad~ 43 (325)
T 3ing_A 3 KEIRIILMGTGNVGLNVLRIIDASNRRRSAFSIKVVGVSDS 43 (325)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHHHHHC--CEEEEEEEECS
T ss_pred ceEEEEEEcCcHHHHHHHHHHHhchhhccCCCEEEEEEEec
Confidence 368999999999999999987652 1357999999886
No 97
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=92.16 E-value=0.048 Score=48.18 Aligned_cols=98 Identities=16% Similarity=0.153 Sum_probs=60.3
Q ss_pred eeeEEEeCCChhhHHHHHHHhhCC-----CCCeEEEEEeCCCChhhhhhhccccCcCcccCceEEEecCCcEEECCeEEE
Q 025793 86 KLKVAINGFGRIGRNFLRCWHGRK-----DSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIK 160 (248)
Q Consensus 86 ~vkV~INGFGRIGRlvlR~~~~~~-----~~~l~iVaIND~~~~e~~ayLLkYDStHGkf~g~V~v~e~~~L~inGk~I~ 160 (248)
++||||.|+|+||+.-++++...+ ....++++|-|+ +.+.+..+-+ +|... ++
T Consensus 6 klrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~l~av~d~-~~~~a~~~a~------~~g~~-~~-------------- 63 (390)
T 4h3v_A 6 NLGIGLIGYAFMGAAHSQAWRSAPRFFDLPLHPDLNVLCGR-DAEAVRAAAG------KLGWS-TT-------------- 63 (390)
T ss_dssp EEEEEEECHHHHHHHHHHHHHHHHHHSCCSSEEEEEEEECS-SHHHHHHHHH------HHTCS-EE--------------
T ss_pred cCcEEEEcCCHHHHHHHHHHHhCccccccccCceEEEEEcC-CHHHHHHHHH------HcCCC-cc--------------
Confidence 599999999999998777654321 123589999998 4443332211 11111 11
Q ss_pred EEecCCCCCCCCCCCcccEEecCcccccCchhhhHHHHcCCCEEEEcCCC
Q 025793 161 VVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPA 210 (248)
Q Consensus 161 v~~~~dP~~i~W~~~GidiVVE~TG~F~~~e~a~~HL~~GAKKVIISAPs 210 (248)
+ .|.+++ ..+-.+|.|+=||=-....+-+..=|++| |-|++=-|-
T Consensus 64 -~--~d~~~l-l~~~~iDaV~I~tP~~~H~~~~~~al~aG-khVl~EKPl 108 (390)
T 4h3v_A 64 -E--TDWRTL-LERDDVQLVDVCTPGDSHAEIAIAALEAG-KHVLCEKPL 108 (390)
T ss_dssp -E--SCHHHH-TTCTTCSEEEECSCGGGHHHHHHHHHHTT-CEEEEESSS
T ss_pred -c--CCHHHH-hcCCCCCEEEEeCChHHHHHHHHHHHHcC-CCceeecCc
Confidence 0 111111 11236898988998877777777778887 678876673
No 98
>1gtm_A Glutamate dehydrogenase; oxidoreductase, NAD, NADP; 2.20A {Pyrococcus furiosus} SCOP: c.2.1.7 c.58.1.1 PDB: 1bvu_A 1euz_A
Probab=91.54 E-value=0.22 Score=47.04 Aligned_cols=32 Identities=31% Similarity=0.484 Sum_probs=28.1
Q ss_pred eeEEEeCCChhhHHHHHHHhh-CCCCCeEEEEEeCC
Q 025793 87 LKVAINGFGRIGRNFLRCWHG-RKDSPLDVVVVNDS 121 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~-~~~~~l~iVaIND~ 121 (248)
.+|+|-|||+||+.++|.+.+ . ..++++++|+
T Consensus 213 ktvgI~G~G~VG~~vA~~l~~~~---G~kVv~~sD~ 245 (419)
T 1gtm_A 213 KTIAIQGYGNAGYYLAKIMSEDF---GMKVVAVSDS 245 (419)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CCEEEEEECS
T ss_pred CEEEEEcCCHHHHHHHHHHHHhc---CCEEEEEeCC
Confidence 579999999999999998876 4 4799999987
No 99
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=91.46 E-value=0.082 Score=49.19 Aligned_cols=100 Identities=9% Similarity=0.099 Sum_probs=63.6
Q ss_pred eeeEEEeCC----ChhhHHHHHHHhhCCCCCeEEEEEeCCCChhhhhhhccccCcCcccCceEEEecCCcEEECCeEEEE
Q 025793 86 KLKVAINGF----GRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKV 161 (248)
Q Consensus 86 ~vkV~INGF----GRIGRlvlR~~~~~~~~~l~iVaIND~~~~e~~ayLLkYDStHGkf~g~V~v~e~~~L~inGk~I~v 161 (248)
++||+|.|+ |+||+..++.+... .+.+++|+|-|. +.+....+-+. ||. . .++ +
T Consensus 20 ~irvgiIG~g~~gG~~g~~~~~~l~~~-~~~~~lvav~d~-~~~~~~~~a~~---~g~-~-~~~---------------~ 77 (438)
T 3btv_A 20 PIRVGFVGLNAAKGWAIKTHYPAILQL-SSQFQITALYSP-KIETSIATIQR---LKL-S-NAT---------------A 77 (438)
T ss_dssp CEEEEEESCCTTSSSTTTTHHHHHHHT-TTTEEEEEEECS-SHHHHHHHHHH---TTC-T-TCE---------------E
T ss_pred CCEEEEEcccCCCChHHHHHHHHHHhc-CCCeEEEEEEeC-CHHHHHHHHHH---cCC-C-cce---------------e
Confidence 489999999 99999999987653 146999999987 33332221110 121 0 011 1
Q ss_pred EecCCCCCCCCCCCcccEEecCcccccCchhhhHHHHcCC-----CEEEEcCCC
Q 025793 162 VSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGA-----KKVIITAPA 210 (248)
Q Consensus 162 ~~~~dP~~i~W~~~GidiVVE~TG~F~~~e~a~~HL~~GA-----KKVIISAPs 210 (248)
+ .|.+++- .+..+|+|+.||--....+.+..-|++|. |.|++--|.
T Consensus 78 ~--~~~~~ll-~~~~vD~V~i~tp~~~H~~~~~~al~aG~~~~~~khVl~EKP~ 128 (438)
T 3btv_A 78 F--PTLESFA-SSSTIDMIVIAIQVASHYEVVMPLLEFSKNNPNLKYLFVEWAL 128 (438)
T ss_dssp E--SSHHHHH-HCSSCSEEEECSCHHHHHHHHHHHHHHGGGCTTCCEEEEESSC
T ss_pred e--CCHHHHh-cCCCCCEEEEeCCcHHHHHHHHHHHHCCCCcccceeEEecCcc
Confidence 1 1222221 12368999999988777777777788885 778887664
No 100
>3do5_A HOM, homoserine dehydrogenase; NP_069768.1, putative homoserine dehydrogenase, structural G joint center for structural genomics, JCSG; 2.20A {Archaeoglobus fulgidus}
Probab=91.42 E-value=0.23 Score=45.27 Aligned_cols=36 Identities=31% Similarity=0.509 Sum_probs=30.1
Q ss_pred eeeEEEeCCChhhHHHHHHHhhCC------CCCeEEEEEeCC
Q 025793 86 KLKVAINGFGRIGRNFLRCWHGRK------DSPLDVVVVNDS 121 (248)
Q Consensus 86 ~vkV~INGFGRIGRlvlR~~~~~~------~~~l~iVaIND~ 121 (248)
++||+|.|+|.||+.+++.+.+.. +.++++++|-|.
T Consensus 2 mirvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~ 43 (327)
T 3do5_A 2 MIKIAIVGFGTVGQGVAELLIRKREEIEKAIGEFKVTAVADS 43 (327)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTHHHHHHHHCCEEEEEEECS
T ss_pred cEEEEEEeccHHHHHHHHHHHhhHHHHHhcCCCEEEEEEEeC
Confidence 379999999999999999887541 157999999986
No 101
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=91.32 E-value=0.21 Score=44.61 Aligned_cols=89 Identities=25% Similarity=0.235 Sum_probs=58.9
Q ss_pred eeeEEEeCCChhhH-HHHHHHhhCCCCCeEEEEEeCCCChhhhhhhccccCcCcccCceEEEecCCcEEECCeEEEEEec
Q 025793 86 KLKVAINGFGRIGR-NFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (248)
Q Consensus 86 ~vkV~INGFGRIGR-lvlR~~~~~~~~~l~iVaIND~~~~e~~ayLLkYDStHGkf~g~V~v~e~~~L~inGk~I~v~~~ 164 (248)
++||||.|+|+||+ ..++++... +.+++|+|-|+.. +. + | ++++
T Consensus 25 ~~rvgiiG~G~ig~~~~~~~l~~~--~~~~lvav~d~~~-~~-------------~---------------g--~~~~-- 69 (330)
T 4ew6_A 25 PINLAIVGVGKIVRDQHLPSIAKN--ANFKLVATASRHG-TV-------------E---------------G--VNSY-- 69 (330)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHHC--TTEEEEEEECSSC-CC-------------T---------------T--SEEE--
T ss_pred CceEEEEecCHHHHHHHHHHHHhC--CCeEEEEEEeCCh-hh-------------c---------------C--CCcc--
Confidence 58999999999998 788887654 4699999998731 10 1 1 0111
Q ss_pred CCCCCCCCCCCcccEEecCcccccCchhhhHHHHcCCCEEEEcCCC
Q 025793 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPA 210 (248)
Q Consensus 165 ~dP~~i~W~~~GidiVVE~TG~F~~~e~a~~HL~~GAKKVIISAPs 210 (248)
.|.+++-=..-.+|+|+-||--..-.+-+..=|++| |-|++--|.
T Consensus 70 ~~~~~ll~~~~~vD~V~i~tp~~~H~~~~~~al~aG-khVl~EKP~ 114 (330)
T 4ew6_A 70 TTIEAMLDAEPSIDAVSLCMPPQYRYEAAYKALVAG-KHVFLEKPP 114 (330)
T ss_dssp SSHHHHHHHCTTCCEEEECSCHHHHHHHHHHHHHTT-CEEEECSSS
T ss_pred CCHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHHHcC-CcEEEeCCC
Confidence 112221000035789999988777777777777887 778877664
No 102
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=91.12 E-value=0.33 Score=41.85 Aligned_cols=96 Identities=20% Similarity=0.250 Sum_probs=57.9
Q ss_pred eeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeCCCChhhhhhhccccCcCcccCceEEEecCCcEEECCeEEEEEecC
Q 025793 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNR 165 (248)
Q Consensus 86 ~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND~~~~e~~ayLLkYDStHGkf~g~V~v~e~~~L~inGk~I~v~~~~ 165 (248)
..+|+|.|.|++|+.++|.... ....+++|++-|. +++.. |+ .++|.+| ....
T Consensus 85 ~~rV~IIGAG~~G~~La~~~~~-~~~g~~iVg~~D~-dp~k~----------g~-------------~i~gv~V--~~~~ 137 (215)
T 2vt3_A 85 MTDVILIGVGNLGTAFLHYNFT-KNNNTKISMAFDI-NESKI----------GT-------------EVGGVPV--YNLD 137 (215)
T ss_dssp --CEEEECCSHHHHHHHHCC-------CCEEEEEES-CTTTT----------TC-------------EETTEEE--EEGG
T ss_pred CCEEEEEccCHHHHHHHHHHhc-ccCCcEEEEEEeC-CHHHH----------Hh-------------HhcCCee--echh
Confidence 3689999999999999995221 2346899999876 22221 11 1334333 2333
Q ss_pred CCCCCCCCCCcccEEecCcccccCchhhhHHHHcCCCEEEEcCCCC
Q 025793 166 DPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAK 211 (248)
Q Consensus 166 dP~~i~W~~~GidiVVE~TG~F~~~e~a~~HL~~GAKKVIISAPsk 211 (248)
+..++- .+. |+|+-|+-.....+-+..-+++|.+-++.-+|..
T Consensus 138 dl~eli-~~~--D~ViIAvPs~~~~ei~~~l~~aGi~~Ilnf~P~~ 180 (215)
T 2vt3_A 138 DLEQHV-KDE--SVAILTVPAVAAQSITDRLVALGIKGILNFTPAR 180 (215)
T ss_dssp GHHHHC-SSC--CEEEECSCHHHHHHHHHHHHHTTCCEEEECSSCC
T ss_pred hHHHHH-HhC--CEEEEecCchhHHHHHHHHHHcCCCEEEEcCcee
Confidence 333221 122 8999998766555555566678999999999974
No 103
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=91.11 E-value=1.3 Score=37.06 Aligned_cols=33 Identities=12% Similarity=0.092 Sum_probs=25.8
Q ss_pred ceeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeC
Q 025793 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (248)
Q Consensus 85 ~~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND 120 (248)
|++||.|-|-|.||+.+++.+.++ ..+|+++.-
T Consensus 4 m~~~ilVtGaG~iG~~l~~~L~~~---g~~V~~~~r 36 (286)
T 3ius_A 4 MTGTLLSFGHGYTARVLSRALAPQ---GWRIIGTSR 36 (286)
T ss_dssp -CCEEEEETCCHHHHHHHHHHGGG---TCEEEEEES
T ss_pred CcCcEEEECCcHHHHHHHHHHHHC---CCEEEEEEc
Confidence 567999999999999999998865 356666643
No 104
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=90.98 E-value=0.3 Score=44.52 Aligned_cols=30 Identities=23% Similarity=0.326 Sum_probs=24.3
Q ss_pred eeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEe
Q 025793 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIN 119 (248)
.+|||.|||+||+.++|.+... .+++++.+
T Consensus 142 ~tvGIiG~G~IG~~va~~~~~f---g~~v~~~d 171 (334)
T 3kb6_A 142 LTLGVIGTGRIGSRVAMYGLAF---GMKVLCYD 171 (334)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT---TCEEEEEC
T ss_pred cEEEEECcchHHHHHHHhhccc---CceeeecC
Confidence 5799999999999999987653 46777654
No 105
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=90.82 E-value=0.23 Score=38.50 Aligned_cols=33 Identities=18% Similarity=0.304 Sum_probs=26.1
Q ss_pred ceeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeC
Q 025793 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (248)
Q Consensus 85 ~~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND 120 (248)
++-+|.|-|+|++|+.+++.+.+. ..++++|..
T Consensus 6 ~~~~viIiG~G~~G~~la~~L~~~---g~~v~vid~ 38 (140)
T 3fwz_A 6 ICNHALLVGYGRVGSLLGEKLLAS---DIPLVVIET 38 (140)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHT---TCCEEEEES
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC---CCCEEEEEC
Confidence 456899999999999999988764 357777743
No 106
>3c8m_A Homoserine dehydrogenase; structural genomics, APC89447, PS protein structure initiative, midwest center for structural genomics; HET: MSE; 1.90A {Thermoplasma volcanium GSS1} PDB: 3jsa_A*
Probab=90.80 E-value=0.14 Score=46.50 Aligned_cols=36 Identities=33% Similarity=0.549 Sum_probs=29.3
Q ss_pred eeeEEEeCCChhhHHHHHHHhhCC-----CCCeEEEEEeCC
Q 025793 86 KLKVAINGFGRIGRNFLRCWHGRK-----DSPLDVVVVNDS 121 (248)
Q Consensus 86 ~vkV~INGFGRIGRlvlR~~~~~~-----~~~l~iVaIND~ 121 (248)
++||+|.|||.||+.+++.+.... +.++++++|-|.
T Consensus 6 ~irvgIiG~G~VG~~~~~~l~~~~~~~~~g~~~~vvaV~d~ 46 (331)
T 3c8m_A 6 TINLSIFGLGNVGLNLLRIIRSFNEENRLGLKFNVVFVADS 46 (331)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHCSSSEEEEEEEEECS
T ss_pred EEeEEEEecCHHHHHHHHHHHhChHHHhcCCcEEEEEEEEC
Confidence 589999999999999999876531 125899999886
No 107
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=90.72 E-value=0.26 Score=47.21 Aligned_cols=35 Identities=11% Similarity=0.285 Sum_probs=30.3
Q ss_pred ceeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeCC
Q 025793 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (248)
Q Consensus 85 ~~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND~ 121 (248)
.++||||.|+|+||+.+++.+.. .+.+++++|-|.
T Consensus 22 k~IRVGIIGaG~iG~~~~~~l~~--~~~veLvAV~D~ 56 (446)
T 3upl_A 22 KPIRIGLIGAGEMGTDIVTQVAR--MQGIEVGALSAR 56 (446)
T ss_dssp CCEEEEEECCSHHHHHHHHHHTT--SSSEEEEEEECS
T ss_pred CceEEEEECChHHHHHHHHHHhh--CCCcEEEEEEeC
Confidence 56999999999999999987654 357999999998
No 108
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=90.71 E-value=0.16 Score=48.07 Aligned_cols=101 Identities=10% Similarity=0.140 Sum_probs=63.5
Q ss_pred ceeeEEEeCC----ChhhHHHHHHHhhCCCCCeEEEEEeCCCChhhhhhhccccCcCcccCceEEEecCCcEEECCeEEE
Q 025793 85 AKLKVAINGF----GRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIK 160 (248)
Q Consensus 85 ~~vkV~INGF----GRIGRlvlR~~~~~~~~~l~iVaIND~~~~e~~ayLLkYDStHGkf~g~V~v~e~~~L~inGk~I~ 160 (248)
.++||||.|+ |.||+..++++... .+.+++|+|-|. +.+.+..+-+ .||- + .++
T Consensus 38 ~~irvgiIG~g~~GG~~g~~h~~~l~~~-~~~~~lvav~d~-~~~~a~~~a~---~~g~-~-~~~--------------- 95 (479)
T 2nvw_A 38 RPIRVGFVGLTSGKSWVAKTHFLAIQQL-SSQFQIVALYNP-TLKSSLQTIE---QLQL-K-HAT--------------- 95 (479)
T ss_dssp CCEEEEEECCCSTTSHHHHTHHHHHHHT-TTTEEEEEEECS-CHHHHHHHHH---HTTC-T-TCE---------------
T ss_pred CcCEEEEEcccCCCCHHHHHHHHHHHhc-CCCeEEEEEEeC-CHHHHHHHHH---HcCC-C-cce---------------
Confidence 3589999999 99999999987653 146899999997 3333221111 0121 0 001
Q ss_pred EEecCCCCCCCCCCCcccEEecCcccccCchhhhHHHHcCC-----CEEEEcCCC
Q 025793 161 VVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGA-----KKVIITAPA 210 (248)
Q Consensus 161 v~~~~dP~~i~W~~~GidiVVE~TG~F~~~e~a~~HL~~GA-----KKVIISAPs 210 (248)
++ .|++++- .+..+|+|+-||--....+-+..=|++|. |-|++=-|.
T Consensus 96 ~~--~d~~ell-~~~~vD~V~I~tp~~~H~~~~~~al~aG~~~~~~khVl~EKPl 147 (479)
T 2nvw_A 96 GF--DSLESFA-QYKDIDMIVVSVKVPEHYEVVKNILEHSSQNLNLRYLYVEWAL 147 (479)
T ss_dssp EE--SCHHHHH-HCTTCSEEEECSCHHHHHHHHHHHHHHSSSCSSCCEEEEESSS
T ss_pred ee--CCHHHHh-cCCCCCEEEEcCCcHHHHHHHHHHHHCCCCcCCceeEEEeCCC
Confidence 11 1121110 11368999999988777777777788884 778887663
No 109
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=90.54 E-value=0.26 Score=44.88 Aligned_cols=32 Identities=25% Similarity=0.356 Sum_probs=26.5
Q ss_pred eeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeCC
Q 025793 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND~ 121 (248)
.+|||.|||+||+.++|.+... .++|++.+..
T Consensus 138 ktvGIiGlG~IG~~vA~~l~~~---G~~V~~~dr~ 169 (324)
T 3evt_A 138 QQLLIYGTGQIGQSLAAKASAL---GMHVIGVNTT 169 (324)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT---TCEEEEEESS
T ss_pred CeEEEECcCHHHHHHHHHHHhC---CCEEEEECCC
Confidence 5899999999999999988653 4788888753
No 110
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=90.52 E-value=0.4 Score=42.52 Aligned_cols=95 Identities=16% Similarity=0.226 Sum_probs=61.2
Q ss_pred eeeEEEeCC-ChhhHHHHHHHhhCCCCCeEEEEEeCCCChhhhhhhccccCcCcccCceEEEecCCcEEECCeEEEEEec
Q 025793 86 KLKVAINGF-GRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (248)
Q Consensus 86 ~vkV~INGF-GRIGRlvlR~~~~~~~~~l~iVaIND~~~~e~~ayLLkYDStHGkf~g~V~v~e~~~L~inGk~I~v~~~ 164 (248)
++||||.|+ |+||+..++++... +.++|+|-|+.. +. + +.+..+ .+ +.+ +.
T Consensus 3 mirvgiIG~gG~i~~~h~~~l~~~---~~~lvav~d~~~-~~-~---~~~~~~---~~-~~~---------------~~- 54 (312)
T 3o9z_A 3 MTRFALTGLAGYIAPRHLKAIKEV---GGVLVASLDPAT-NV-G---LVDSFF---PE-AEF---------------FT- 54 (312)
T ss_dssp CCEEEEECTTSSSHHHHHHHHHHT---TCEEEEEECSSC-CC-G---GGGGTC---TT-CEE---------------ES-
T ss_pred ceEEEEECCChHHHHHHHHHHHhC---CCEEEEEEcCCH-HH-H---HHHhhC---CC-Cce---------------eC-
Confidence 479999999 79999999987653 479999999732 21 1 111111 11 111 11
Q ss_pred CCCCCCC-----C--CCCcccEEecCcccccCchhhhHHHHcCCCEEEEcCCC
Q 025793 165 RDPLQLP-----W--AELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPA 210 (248)
Q Consensus 165 ~dP~~i~-----W--~~~GidiVVE~TG~F~~~e~a~~HL~~GAKKVIISAPs 210 (248)
+.+++. | .+-.+|+|+-||--....+-+..=|++| |-|++=-|-
T Consensus 55 -~~~~ll~~~~~l~~~~~~vD~V~I~tP~~~H~~~~~~al~aG-khVl~EKPl 105 (312)
T 3o9z_A 55 -EPEAFEAYLEDLRDRGEGVDYLSIASPNHLHYPQIRMALRLG-ANALSEKPL 105 (312)
T ss_dssp -CHHHHHHHHHHHHHTTCCCSEEEECSCGGGHHHHHHHHHHTT-CEEEECSSS
T ss_pred -CHHHHHHHhhhhcccCCCCcEEEECCCchhhHHHHHHHHHCC-CeEEEECCC
Confidence 111110 0 2346899999999888888888888888 668876663
No 111
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=89.97 E-value=0.3 Score=44.96 Aligned_cols=94 Identities=19% Similarity=0.184 Sum_probs=56.8
Q ss_pred ceeeEEEeCCCh---hhHHHHHHHhhCCCCCeEEEE-EeCCCChhhhhhhc-ccc----CcCcccCceEEEecCCcEEEC
Q 025793 85 AKLKVAINGFGR---IGRNFLRCWHGRKDSPLDVVV-VNDSGGVKNASHLL-KYD----SLLGTFKADVKIVDNETISVD 155 (248)
Q Consensus 85 ~~vkV~INGFGR---IGRlvlR~~~~~~~~~l~iVa-IND~~~~e~~ayLL-kYD----StHGkf~g~V~v~e~~~L~in 155 (248)
.++||||.|+|+ ||+..++++... +.+++|+ |-|. +.+....+- +|. .++.
T Consensus 36 ~~~rvgiiG~G~~~~ig~~h~~~~~~~--~~~~lva~v~d~-~~~~a~~~a~~~g~~~~~~~~----------------- 95 (417)
T 3v5n_A 36 KRIRLGMVGGGSGAFIGAVHRIAARLD--DHYELVAGALSS-TPEKAEASGRELGLDPSRVYS----------------- 95 (417)
T ss_dssp CCEEEEEESCC--CHHHHHHHHHHHHT--SCEEEEEEECCS-SHHHHHHHHHHHTCCGGGBCS-----------------
T ss_pred CcceEEEEcCCCchHHHHHHHHHHhhC--CCcEEEEEEeCC-CHHHHHHHHHHcCCCcccccC-----------------
Confidence 368999999999 999888776543 4589997 8887 333322211 121 0111
Q ss_pred CeEEEEEecCCCCCCCCC----CCcccEEecCcccccCchhhhHHHHcCCCEEEEcCC
Q 025793 156 GKLIKVVSNRDPLQLPWA----ELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (248)
Q Consensus 156 Gk~I~v~~~~dP~~i~W~----~~GidiVVE~TG~F~~~e~a~~HL~~GAKKVIISAP 209 (248)
|++++-=. +-++|+|+-||--....+-+..-|++| |-|++=-|
T Consensus 96 ----------~~~~ll~~~~~~~~~vD~V~I~tp~~~H~~~~~~al~aG-khVl~EKP 142 (417)
T 3v5n_A 96 ----------DFKEMAIREAKLKNGIEAVAIVTPNHVHYAAAKEFLKRG-IHVICDKP 142 (417)
T ss_dssp ----------CHHHHHHHHHHCTTCCSEEEECSCTTSHHHHHHHHHTTT-CEEEEESS
T ss_pred ----------CHHHHHhcccccCCCCcEEEECCCcHHHHHHHHHHHhCC-CeEEEECC
Confidence 11111000 025889999998877777777777777 55777666
No 112
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=89.97 E-value=0.095 Score=47.34 Aligned_cols=94 Identities=20% Similarity=0.181 Sum_probs=51.9
Q ss_pred ceeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeCCCChhhhhhhccccCcCcccCceEEEecCCcEEECCeEEEEEec
Q 025793 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (248)
Q Consensus 85 ~~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND~~~~e~~ayLLkYDStHGkf~g~V~v~e~~~L~inGk~I~v~~~ 164 (248)
.++||.|.|.|.+|+.+++.+.+. .++.++.++ .+.+..+-+ +...+.+| .
T Consensus 15 ~~mkilvlGaG~vG~~~~~~L~~~--~~v~~~~~~----~~~~~~~~~-------~~~~~~~d----------------~ 65 (365)
T 3abi_A 15 RHMKVLILGAGNIGRAIAWDLKDE--FDVYIGDVN----NENLEKVKE-------FATPLKVD----------------A 65 (365)
T ss_dssp -CCEEEEECCSHHHHHHHHHHTTT--SEEEEEESC----HHHHHHHTT-------TSEEEECC----------------T
T ss_pred CccEEEEECCCHHHHHHHHHHhcC--CCeEEEEcC----HHHHHHHhc-------cCCcEEEe----------------c
Confidence 457999999999999999987542 334444333 222222211 11122221 1
Q ss_pred CCCCCCCCCCCcccEEecCcccccCchhhhHHHHcCCCEEEEc
Q 025793 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIIT 207 (248)
Q Consensus 165 ~dP~~i~W~~~GidiVVE~TG~F~~~e~a~~HL~~GAKKVIIS 207 (248)
.|++.+.=--.++|+||-|+|-|...+-+..-+++|+.=|=+|
T Consensus 66 ~d~~~l~~~~~~~DvVi~~~p~~~~~~v~~~~~~~g~~yvD~s 108 (365)
T 3abi_A 66 SNFDKLVEVMKEFELVIGALPGFLGFKSIKAAIKSKVDMVDVS 108 (365)
T ss_dssp TCHHHHHHHHTTCSEEEECCCGGGHHHHHHHHHHHTCEEEECC
T ss_pred CCHHHHHHHHhCCCEEEEecCCcccchHHHHHHhcCcceEeee
Confidence 2232221111367899999988876666666667776544333
No 113
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=89.77 E-value=0.2 Score=44.44 Aligned_cols=97 Identities=12% Similarity=0.103 Sum_probs=54.9
Q ss_pred ceeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeCCC---ChhhhhhhccccCcCcccCceEEEecCCcEEECCeEEEE
Q 025793 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSG---GVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKV 161 (248)
Q Consensus 85 ~~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND~~---~~e~~ayLLkYDStHGkf~g~V~v~e~~~L~inGk~I~v 161 (248)
|++||||.|+|.||+..++++ .+.+++++|-|+. ..+..+-.++. ||. ..++.
T Consensus 1 M~~rvgiiG~G~~~~~~~~~l----~~~~~lvav~d~~~~~~~~~~~~~~~~---~~~---~~~~~-------------- 56 (337)
T 3ip3_A 1 MSLKICVIGSSGHFRYALEGL----DEECSITGIAPGVPEEDLSKLEKAISE---MNI---KPKKY-------------- 56 (337)
T ss_dssp -CEEEEEECSSSCHHHHHTTC----CTTEEEEEEECSSTTCCCHHHHHHHHT---TTC---CCEEC--------------
T ss_pred CceEEEEEccchhHHHHHHhc----CCCcEEEEEecCCchhhHHHHHHHHHH---cCC---CCccc--------------
Confidence 578999999999999777765 3579999999873 23343332210 110 00110
Q ss_pred EecCCCCCCCCCCCcccEEecCcccccCchhhhHHHHcCCCEEEEcCCC
Q 025793 162 VSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPA 210 (248)
Q Consensus 162 ~~~~dP~~i~W~~~GidiVVE~TG~F~~~e~a~~HL~~GAKKVIISAPs 210 (248)
.|.+++ ..+-.+|+|+-||--....+-+..=|++| |.|++=-|-
T Consensus 57 ---~~~~~l-l~~~~vD~V~I~tp~~~H~~~~~~al~aG-khVl~EKPl 100 (337)
T 3ip3_A 57 ---NNWWEM-LEKEKPDILVINTVFSLNGKILLEALERK-IHAFVEKPI 100 (337)
T ss_dssp ---SSHHHH-HHHHCCSEEEECSSHHHHHHHHHHHHHTT-CEEEECSSS
T ss_pred ---CCHHHH-hcCCCCCEEEEeCCcchHHHHHHHHHHCC-CcEEEeCCC
Confidence 111111 01124677777776665555566666666 456665553
No 114
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=89.73 E-value=0.3 Score=44.91 Aligned_cols=32 Identities=31% Similarity=0.429 Sum_probs=25.8
Q ss_pred eeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeCC
Q 025793 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND~ 121 (248)
.+|||.|||+||+.++|.+... .++|++.+-.
T Consensus 174 ktvGIIGlG~IG~~vA~~l~~~---G~~V~~~dr~ 205 (345)
T 4g2n_A 174 RRLGIFGMGRIGRAIATRARGF---GLAIHYHNRT 205 (345)
T ss_dssp CEEEEESCSHHHHHHHHHHHTT---TCEEEEECSS
T ss_pred CEEEEEEeChhHHHHHHHHHHC---CCEEEEECCC
Confidence 5899999999999999987643 4788876643
No 115
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=89.49 E-value=0.31 Score=44.41 Aligned_cols=33 Identities=21% Similarity=0.284 Sum_probs=26.3
Q ss_pred eeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeCC
Q 025793 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (248)
Q Consensus 86 ~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND~ 121 (248)
-.+|||.|||+||+.++|.+... .++|++.+-.
T Consensus 141 g~tvgIiG~G~IG~~vA~~l~~~---G~~V~~~d~~ 173 (334)
T 2pi1_A 141 RLTLGVIGTGRIGSRVAMYGLAF---GMKVLCYDVV 173 (334)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHT---TCEEEEECSS
T ss_pred CceEEEECcCHHHHHHHHHHHHC---cCEEEEECCC
Confidence 35899999999999999988653 4688777643
No 116
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=89.31 E-value=0.34 Score=43.83 Aligned_cols=32 Identities=31% Similarity=0.484 Sum_probs=25.6
Q ss_pred eeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeC
Q 025793 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (248)
Q Consensus 86 ~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND 120 (248)
..+|+|.|||+||+.++|.+... .++|++.+-
T Consensus 146 g~~vgIiG~G~IG~~~A~~l~~~---G~~V~~~d~ 177 (331)
T 1xdw_A 146 NCTVGVVGLGRIGRVAAQIFHGM---GATVIGEDV 177 (331)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHT---TCEEEEECS
T ss_pred CCEEEEECcCHHHHHHHHHHHHC---CCEEEEECC
Confidence 35899999999999999987653 468777654
No 117
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=89.26 E-value=0.23 Score=44.78 Aligned_cols=94 Identities=14% Similarity=0.206 Sum_probs=57.8
Q ss_pred eeeEEEeCCChhhHH-HHHHHhhCCCCCeEEEEEeCCCChhhhhhhc-cccCcCcccCceEEEecCCcEEECCeEEEEEe
Q 025793 86 KLKVAINGFGRIGRN-FLRCWHGRKDSPLDVVVVNDSGGVKNASHLL-KYDSLLGTFKADVKIVDNETISVDGKLIKVVS 163 (248)
Q Consensus 86 ~vkV~INGFGRIGRl-vlR~~~~~~~~~l~iVaIND~~~~e~~ayLL-kYDStHGkf~g~V~v~e~~~L~inGk~I~v~~ 163 (248)
++||||.|+|+||.. +++++.. +.+++++|-|+ +.+....+- +| | . +.+ +
T Consensus 26 ~irvgiiG~G~~~~~~~~~~~~~---~~~~lvav~d~-~~~~a~~~a~~~----~---~-~~~---------------~- 77 (361)
T 3u3x_A 26 ELRFAAVGLNHNHIYGQVNCLLR---AGARLAGFHEK-DDALAAEFSAVY----A---D-ARR---------------I- 77 (361)
T ss_dssp CCEEEEECCCSTTHHHHHHHHHH---TTCEEEEEECS-CHHHHHHHHHHS----S---S-CCE---------------E-
T ss_pred CcEEEEECcCHHHHHHHHHHhhc---CCcEEEEEEcC-CHHHHHHHHHHc----C---C-Ccc---------------c-
Confidence 589999999999964 4554432 46899999998 333332221 12 1 0 111 0
Q ss_pred cCCCCCCCCCCCcccEEecCcccccCchhhhHHHHcCCCEEEEcCCC
Q 025793 164 NRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPA 210 (248)
Q Consensus 164 ~~dP~~i~W~~~GidiVVE~TG~F~~~e~a~~HL~~GAKKVIISAPs 210 (248)
.|.+++ ..+-.+|+|+-||--....+-+..=|++| |-|++=-|-
T Consensus 78 -~~~~~l-l~~~~vD~V~I~tp~~~H~~~~~~al~aG-khVl~EKPl 121 (361)
T 3u3x_A 78 -ATAEEI-LEDENIGLIVSAAVSSERAELAIRAMQHG-KDVLVDKPG 121 (361)
T ss_dssp -SCHHHH-HTCTTCCEEEECCCHHHHHHHHHHHHHTT-CEEEEESCS
T ss_pred -CCHHHH-hcCCCCCEEEEeCChHHHHHHHHHHHHCC-CeEEEeCCC
Confidence 111111 01235899999998877777777777777 668776663
No 118
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=89.17 E-value=0.36 Score=43.30 Aligned_cols=32 Identities=25% Similarity=0.236 Sum_probs=25.6
Q ss_pred eeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeC
Q 025793 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (248)
Q Consensus 86 ~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND 120 (248)
..+|+|.|||+||+.++|.+... .++|++.+-
T Consensus 124 g~~vgIIG~G~IG~~~A~~l~~~---G~~V~~~dr 155 (303)
T 1qp8_A 124 GEKVAVLGLGEIGTRVGKILAAL---GAQVRGFSR 155 (303)
T ss_dssp TCEEEEESCSTHHHHHHHHHHHT---TCEEEEECS
T ss_pred CCEEEEEccCHHHHHHHHHHHHC---CCEEEEECC
Confidence 35899999999999999987653 368777664
No 119
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=89.10 E-value=0.36 Score=43.78 Aligned_cols=32 Identities=22% Similarity=0.421 Sum_probs=25.5
Q ss_pred eeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeC
Q 025793 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (248)
Q Consensus 86 ~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND 120 (248)
..+|||.|||+||+.++|.+... .++|++.+-
T Consensus 145 g~~vgIiG~G~IG~~~A~~l~~~---G~~V~~~d~ 176 (333)
T 1dxy_A 145 QQTVGVMGTGHIGQVAIKLFKGF---GAKVIAYDP 176 (333)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHT---TCEEEEECS
T ss_pred CCEEEEECcCHHHHHHHHHHHHC---CCEEEEECC
Confidence 35899999999999999987653 468776654
No 120
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=88.73 E-value=0.34 Score=43.85 Aligned_cols=32 Identities=19% Similarity=0.260 Sum_probs=26.0
Q ss_pred eeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeCC
Q 025793 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND~ 121 (248)
.+|||.|||+||+.++|.+... .++|++.+..
T Consensus 140 ~tvGIiG~G~IG~~vA~~l~~~---G~~V~~~dr~ 171 (315)
T 3pp8_A 140 FSVGIMGAGVLGAKVAESLQAW---GFPLRCWSRS 171 (315)
T ss_dssp CCEEEECCSHHHHHHHHHHHTT---TCCEEEEESS
T ss_pred CEEEEEeeCHHHHHHHHHHHHC---CCEEEEEcCC
Confidence 5899999999999999987643 4688877653
No 121
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=88.68 E-value=0.4 Score=43.75 Aligned_cols=32 Identities=25% Similarity=0.265 Sum_probs=26.1
Q ss_pred eeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeCC
Q 025793 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND~ 121 (248)
.+|||.|||+||+.++|.+... .++|++.+..
T Consensus 141 ~tvGIIGlG~IG~~vA~~l~~~---G~~V~~~dr~ 172 (324)
T 3hg7_A 141 RTLLILGTGSIGQHIAHTGKHF---GMKVLGVSRS 172 (324)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT---TCEEEEECSS
T ss_pred ceEEEEEECHHHHHHHHHHHhC---CCEEEEEcCC
Confidence 5899999999999999988653 4788877643
No 122
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=88.64 E-value=0.4 Score=44.14 Aligned_cols=32 Identities=22% Similarity=0.330 Sum_probs=25.8
Q ss_pred eeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeC
Q 025793 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (248)
Q Consensus 86 ~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND 120 (248)
-.+|||.|||+||+.++|.+... .++|++.+-
T Consensus 160 g~tvGIIGlG~IG~~vA~~l~~~---G~~V~~~d~ 191 (352)
T 3gg9_A 160 GQTLGIFGYGKIGQLVAGYGRAF---GMNVLVWGR 191 (352)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT---TCEEEEECS
T ss_pred CCEEEEEeECHHHHHHHHHHHhC---CCEEEEECC
Confidence 35899999999999999987653 478887753
No 123
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=88.52 E-value=0.41 Score=44.00 Aligned_cols=32 Identities=22% Similarity=0.376 Sum_probs=26.0
Q ss_pred eeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeCC
Q 025793 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND~ 121 (248)
.+|||.|||+||+.++|.+... .++|++.+-.
T Consensus 149 ktvgIiGlG~IG~~vA~~l~~~---G~~V~~~d~~ 180 (343)
T 2yq5_A 149 LTVGLIGVGHIGSAVAEIFSAM---GAKVIAYDVA 180 (343)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT---TCEEEEECSS
T ss_pred CeEEEEecCHHHHHHHHHHhhC---CCEEEEECCC
Confidence 5899999999999999987653 4688877643
No 124
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=88.51 E-value=0.36 Score=43.89 Aligned_cols=31 Identities=19% Similarity=0.215 Sum_probs=24.9
Q ss_pred eeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeC
Q 025793 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND 120 (248)
.+|||.|||+||+.++|.+.. -.++|++.+-
T Consensus 146 ~tvGIIG~G~IG~~vA~~l~~---~G~~V~~~d~ 176 (330)
T 4e5n_A 146 ATVGFLGMGAIGLAMADRLQG---WGATLQYHEA 176 (330)
T ss_dssp CEEEEECCSHHHHHHHHHTTT---SCCEEEEECS
T ss_pred CEEEEEeeCHHHHHHHHHHHH---CCCEEEEECC
Confidence 589999999999999998753 2468777654
No 125
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=88.41 E-value=0.43 Score=43.55 Aligned_cols=32 Identities=22% Similarity=0.329 Sum_probs=25.6
Q ss_pred eeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeCC
Q 025793 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND~ 121 (248)
.+|+|.|||+||+.++|.+... .++|++.+-.
T Consensus 166 ~tvgIIGlG~IG~~vA~~l~~~---G~~V~~~d~~ 197 (335)
T 2g76_A 166 KTLGILGLGRIGREVATRMQSF---GMKTIGYDPI 197 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT---TCEEEEECSS
T ss_pred CEEEEEeECHHHHHHHHHHHHC---CCEEEEECCC
Confidence 5899999999999999987643 4788777643
No 126
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=88.31 E-value=0.45 Score=42.86 Aligned_cols=32 Identities=25% Similarity=0.480 Sum_probs=26.1
Q ss_pred eeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeC
Q 025793 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (248)
Q Consensus 86 ~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND 120 (248)
..+|+|.|+|+||+.+++.+... .++|++.+.
T Consensus 146 g~~vgIIG~G~IG~~~A~~l~~~---G~~V~~~d~ 177 (320)
T 1gdh_A 146 NKTLGIYGFGSIGQALAKRAQGF---DMDIDYFDT 177 (320)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTT---TCEEEEECS
T ss_pred CCEEEEECcCHHHHHHHHHHHHC---CCEEEEECC
Confidence 35899999999999999987643 378887775
No 127
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=88.27 E-value=0.48 Score=41.55 Aligned_cols=92 Identities=21% Similarity=0.217 Sum_probs=58.2
Q ss_pred ceeeEEEeCCChhhHHHHHHHhhC-CCCCeEEEEEeCCCChhhhhhhccccCcCcccCceEEEecCCcEEECCeEEEEEe
Q 025793 85 AKLKVAINGFGRIGRNFLRCWHGR-KDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVS 163 (248)
Q Consensus 85 ~~vkV~INGFGRIGRlvlR~~~~~-~~~~l~iVaIND~~~~e~~ayLLkYDStHGkf~g~V~v~e~~~L~inGk~I~v~~ 163 (248)
.++||+|.|+|.||+..++.+... ....+++++|-|.... + ..+ | +. +
T Consensus 6 ~~~rvgiIG~G~iG~~~~~~l~~~~~~~~~~lvav~d~~~~---a------~~~------------------g--~~--~ 54 (294)
T 1lc0_A 6 GKFGVVVVGVGRAGSVRLRDLKDPRSAAFLNLIGFVSRREL---G------SLD------------------E--VR--Q 54 (294)
T ss_dssp CSEEEEEECCSHHHHHHHHHHTSHHHHTTEEEEEEECSSCC---C------EET------------------T--EE--B
T ss_pred CcceEEEEEEcHHHHHHHHHHhccccCCCEEEEEEECchHH---H------HHc------------------C--CC--C
Confidence 468999999999999888876531 0246899999876210 0 000 1 11 1
Q ss_pred cCCCCCCCCCCCcccEEecCcccccCchhhhHHHHcCCCEEEEcCCC
Q 025793 164 NRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPA 210 (248)
Q Consensus 164 ~~dP~~i~W~~~GidiVVE~TG~F~~~e~a~~HL~~GAKKVIISAPs 210 (248)
.|++++- .+-++|+|+.||.-....+-+..-|++| |-|++=-|.
T Consensus 55 -~~~~ell-~~~~vD~V~i~tp~~~H~~~~~~al~aG-khVl~EKPl 98 (294)
T 1lc0_A 55 -ISLEDAL-RSQEIDVAYICSESSSHEDYIRQFLQAG-KHVLVEYPM 98 (294)
T ss_dssp -CCHHHHH-HCSSEEEEEECSCGGGHHHHHHHHHHTT-CEEEEESCS
T ss_pred -CCHHHHh-cCCCCCEEEEeCCcHhHHHHHHHHHHCC-CcEEEeCCC
Confidence 1222220 1236899999998877777777777777 457775563
No 128
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=88.20 E-value=0.41 Score=44.08 Aligned_cols=31 Identities=19% Similarity=0.288 Sum_probs=25.0
Q ss_pred eeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeC
Q 025793 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND 120 (248)
.+|||.|||+||+.++|.+... .++|++.+-
T Consensus 165 ktvGIIG~G~IG~~vA~~l~~~---G~~V~~~dr 195 (351)
T 3jtm_A 165 KTIGTVGAGRIGKLLLQRLKPF---GCNLLYHDR 195 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHGGG---CCEEEEECS
T ss_pred CEEeEEEeCHHHHHHHHHHHHC---CCEEEEeCC
Confidence 5899999999999999987643 468776653
No 129
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=88.18 E-value=0.45 Score=43.62 Aligned_cols=31 Identities=19% Similarity=0.310 Sum_probs=25.1
Q ss_pred eeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeC
Q 025793 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND 120 (248)
.+|||.|||+||+.++|.+... .++|++.+-
T Consensus 169 ~tvGIIG~G~IG~~vA~~l~~~---G~~V~~~d~ 199 (347)
T 1mx3_A 169 ETLGIIGLGRVGQAVALRAKAF---GFNVLFYDP 199 (347)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT---TCEEEEECT
T ss_pred CEEEEEeECHHHHHHHHHHHHC---CCEEEEECC
Confidence 5899999999999999988643 468777653
No 130
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=88.17 E-value=0.42 Score=44.38 Aligned_cols=31 Identities=26% Similarity=0.505 Sum_probs=24.9
Q ss_pred eeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeC
Q 025793 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND 120 (248)
.+|||.|||+||+.++|.+... .++|++.+-
T Consensus 177 ktvGIIGlG~IG~~vA~~l~~f---G~~V~~~d~ 207 (365)
T 4hy3_A 177 SEIGIVGFGDLGKALRRVLSGF---RARIRVFDP 207 (365)
T ss_dssp SEEEEECCSHHHHHHHHHHTTS---CCEEEEECS
T ss_pred CEEEEecCCcccHHHHHhhhhC---CCEEEEECC
Confidence 5899999999999999987532 468877653
No 131
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=87.80 E-value=0.5 Score=42.45 Aligned_cols=33 Identities=24% Similarity=0.344 Sum_probs=26.0
Q ss_pred eeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeCC
Q 025793 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (248)
Q Consensus 86 ~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND~ 121 (248)
..+|+|.|+|+||+.++|.+... .+++++.+-.
T Consensus 144 g~~vgIIG~G~IG~~~A~~l~~~---G~~V~~~d~~ 176 (311)
T 2cuk_A 144 GLTLGLVGMGRIGQAVAKRALAF---GMRVVYHART 176 (311)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT---TCEEEEECSS
T ss_pred CCEEEEEEECHHHHHHHHHHHHC---CCEEEEECCC
Confidence 35899999999999999988653 3677776643
No 132
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=87.79 E-value=0.49 Score=42.80 Aligned_cols=33 Identities=24% Similarity=0.357 Sum_probs=26.1
Q ss_pred eeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeCC
Q 025793 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (248)
Q Consensus 86 ~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND~ 121 (248)
..+|+|.|||+||+.++|.+... .++|++.+-.
T Consensus 146 g~~vgIiG~G~IG~~~A~~l~~~---G~~V~~~d~~ 178 (333)
T 1j4a_A 146 DQVVGVVGTGHIGQVFMQIMEGF---GAKVITYDIF 178 (333)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHT---TCEEEEECSS
T ss_pred CCEEEEEccCHHHHHHHHHHHHC---CCEEEEECCC
Confidence 35899999999999999987653 4687777643
No 133
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=87.74 E-value=0.5 Score=43.38 Aligned_cols=31 Identities=23% Similarity=0.339 Sum_probs=24.8
Q ss_pred eeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeC
Q 025793 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND 120 (248)
.+|||.|||+||+.++|.+... .++|++.+-
T Consensus 172 ktiGIIGlG~IG~~vA~~l~~~---G~~V~~~dr 202 (340)
T 4dgs_A 172 KRIGVLGLGQIGRALASRAEAF---GMSVRYWNR 202 (340)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT---TCEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHHC---CCEEEEEcC
Confidence 5899999999999999987643 467776653
No 134
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=87.74 E-value=0.23 Score=44.64 Aligned_cols=34 Identities=18% Similarity=0.162 Sum_probs=26.3
Q ss_pred cccEEecCcccccCchhhhHHHHcCCCEEEEcCCC
Q 025793 176 GIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPA 210 (248)
Q Consensus 176 GidiVVE~TG~F~~~e~a~~HL~~GAKKVIISAPs 210 (248)
.+|+|+.||.-....+-+..=|++| |-|++=-|-
T Consensus 83 ~iD~V~i~tp~~~h~~~~~~al~~G-k~V~~EKP~ 116 (383)
T 3oqb_A 83 NDTMFFDAATTQARPGLLTQAINAG-KHVYCEKPI 116 (383)
T ss_dssp SCCEEEECSCSSSSHHHHHHHHTTT-CEEEECSCS
T ss_pred CCCEEEECCCchHHHHHHHHHHHCC-CeEEEcCCC
Confidence 5899999999888878777778887 557765553
No 135
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=87.63 E-value=0.52 Score=42.18 Aligned_cols=33 Identities=21% Similarity=0.416 Sum_probs=26.0
Q ss_pred eeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeCC
Q 025793 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (248)
Q Consensus 86 ~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND~ 121 (248)
..+|+|.|+|+||+.++|.+... .++|++.+-.
T Consensus 142 g~~vgIiG~G~IG~~~A~~l~~~---G~~V~~~d~~ 174 (307)
T 1wwk_A 142 GKTIGIIGFGRIGYQVAKIANAL---GMNILLYDPY 174 (307)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT---TCEEEEECSS
T ss_pred CceEEEEccCHHHHHHHHHHHHC---CCEEEEECCC
Confidence 35899999999999999988653 3687776543
No 136
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=87.24 E-value=0.44 Score=42.75 Aligned_cols=31 Identities=23% Similarity=0.352 Sum_probs=25.3
Q ss_pred eeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeC
Q 025793 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND 120 (248)
.+|||.|||+||+.++|.+... .++|++.+-
T Consensus 123 ~tvGIIGlG~IG~~vA~~l~~~---G~~V~~~dr 153 (290)
T 3gvx_A 123 KALGILGYGGIGRRVAHLAKAF---GMRVIAYTR 153 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH---TCEEEEECS
T ss_pred chheeeccCchhHHHHHHHHhh---CcEEEEEec
Confidence 5899999999999999987643 468887764
No 137
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=86.86 E-value=0.61 Score=42.46 Aligned_cols=31 Identities=19% Similarity=0.232 Sum_probs=24.8
Q ss_pred eeEEEeCCChhhHHHHHHHh-hCCCCCeEEEEEeC
Q 025793 87 LKVAINGFGRIGRNFLRCWH-GRKDSPLDVVVVND 120 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~-~~~~~~l~iVaIND 120 (248)
.+|+|.|||+||+.+++.+. .. .++|++.+-
T Consensus 164 ~~vgIIG~G~IG~~vA~~l~~~~---G~~V~~~d~ 195 (348)
T 2w2k_A 164 HVLGAVGLGAIQKEIARKAVHGL---GMKLVYYDV 195 (348)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CCEEEEECS
T ss_pred CEEEEEEECHHHHHHHHHHHHhc---CCEEEEECC
Confidence 58999999999999999876 43 367776654
No 138
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=86.84 E-value=0.61 Score=41.82 Aligned_cols=33 Identities=24% Similarity=0.297 Sum_probs=26.0
Q ss_pred eeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeCC
Q 025793 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (248)
Q Consensus 86 ~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND~ 121 (248)
..+|+|.|+|+||+.+++.+... .++|++.+-.
T Consensus 142 g~~vgIIG~G~IG~~~A~~l~~~---G~~V~~~d~~ 174 (313)
T 2ekl_A 142 GKTIGIVGFGRIGTKVGIIANAM---GMKVLAYDIL 174 (313)
T ss_dssp TCEEEEESCSHHHHHHHHHHHHT---TCEEEEECSS
T ss_pred CCEEEEEeeCHHHHHHHHHHHHC---CCEEEEECCC
Confidence 35899999999999999987653 3687776543
No 139
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=86.80 E-value=0.59 Score=35.65 Aligned_cols=30 Identities=17% Similarity=0.205 Sum_probs=24.1
Q ss_pred eeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEe
Q 025793 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIN 119 (248)
.+|.|-|+|++|+.+++.+.++ ..+++++.
T Consensus 7 ~~v~I~G~G~iG~~la~~L~~~---g~~V~~id 36 (141)
T 3llv_A 7 YEYIVIGSEAAGVGLVRELTAA---GKKVLAVD 36 (141)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT---TCCEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHC---CCeEEEEE
Confidence 4799999999999999988764 35666664
No 140
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=86.55 E-value=1.3 Score=39.21 Aligned_cols=91 Identities=21% Similarity=0.270 Sum_probs=54.3
Q ss_pred eeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeCCCChhhhhhhccccCcCcccCceEEEecCCcEEECCeEEEEEecCC
Q 025793 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRD 166 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND~~~~e~~ayLLkYDStHGkf~g~V~v~e~~~L~inGk~I~v~~~~d 166 (248)
-+|.|+|.|-||.+.+.++... ..+++++-.. .+.+..+.++ |. +. ++ .+
T Consensus 178 ~~VlV~GaG~vG~~a~qla~~~---Ga~Vi~~~~~--~~~~~~~~~l----Ga---~~----------------v~--~~ 227 (348)
T 3two_A 178 TKVGVAGFGGLGSMAVKYAVAM---GAEVSVFARN--EHKKQDALSM----GV---KH----------------FY--TD 227 (348)
T ss_dssp CEEEEESCSHHHHHHHHHHHHT---TCEEEEECSS--STTHHHHHHT----TC---SE----------------EE--SS
T ss_pred CEEEEECCcHHHHHHHHHHHHC---CCeEEEEeCC--HHHHHHHHhc----CC---Ce----------------ec--CC
Confidence 3799999999999988887653 2477776322 2333333322 31 10 11 22
Q ss_pred CCCCCCCCCcccEEecCcccccCchhhhHHHHcCCCEEEEcCCC
Q 025793 167 PLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPA 210 (248)
Q Consensus 167 P~~i~W~~~GidiVVE~TG~F~~~e~a~~HL~~GAKKVIISAPs 210 (248)
++.+ .+ |+|+|+||+|.-...+.+-..|+.|-+=|++..+.
T Consensus 228 ~~~~--~~-~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~ 268 (348)
T 3two_A 228 PKQC--KE-ELDFIISTIPTHYDLKDYLKLLTYNGDLALVGLPP 268 (348)
T ss_dssp GGGC--CS-CEEEEEECCCSCCCHHHHHTTEEEEEEEEECCCCC
T ss_pred HHHH--hc-CCCEEEECCCcHHHHHHHHHHHhcCCEEEEECCCC
Confidence 3322 22 99999999997655666666666665555554443
No 141
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=86.54 E-value=0.7 Score=40.47 Aligned_cols=31 Identities=29% Similarity=0.379 Sum_probs=25.0
Q ss_pred eeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeC
Q 025793 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND 120 (248)
.+|+|.|+|+||+.+++.+... ..+|++.+-
T Consensus 156 ~~v~IiG~G~iG~~~a~~l~~~---G~~V~~~dr 186 (293)
T 3d4o_A 156 ANVAVLGLGRVGMSVARKFAAL---GAKVKVGAR 186 (293)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT---TCEEEEEES
T ss_pred CEEEEEeeCHHHHHHHHHHHhC---CCEEEEEEC
Confidence 5899999999999999988754 257777664
No 142
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=86.52 E-value=0.61 Score=43.64 Aligned_cols=31 Identities=23% Similarity=0.232 Sum_probs=25.0
Q ss_pred eeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeC
Q 025793 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND 120 (248)
.+|||.|||+||+.++|.+... .++|++.+-
T Consensus 146 ktlGiIGlG~IG~~vA~~l~~~---G~~V~~~d~ 176 (404)
T 1sc6_A 146 KKLGIIGYGHIGTQLGILAESL---GMYVYFYDI 176 (404)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT---TCEEEEECS
T ss_pred CEEEEEeECHHHHHHHHHHHHC---CCEEEEEcC
Confidence 5899999999999999987653 468776653
No 143
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=86.51 E-value=0.9 Score=33.77 Aligned_cols=30 Identities=23% Similarity=0.594 Sum_probs=24.0
Q ss_pred eeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEe
Q 025793 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIN 119 (248)
++|.|-|+|++|+.+++.+... ..+++++.
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~---g~~v~~~d 34 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEK---GHDIVLID 34 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT---TCEEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhC---CCeEEEEE
Confidence 5899999999999999988764 35766664
No 144
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=86.22 E-value=0.65 Score=43.52 Aligned_cols=30 Identities=13% Similarity=0.328 Sum_probs=24.5
Q ss_pred eeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEe
Q 025793 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIN 119 (248)
.+|||.|||+||+.++|.+... .++|++.+
T Consensus 120 ktvGIIGlG~IG~~vA~~l~a~---G~~V~~~d 149 (381)
T 3oet_A 120 RTIGIVGVGNVGSRLQTRLEAL---GIRTLLCD 149 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT---TCEEEEEC
T ss_pred CEEEEEeECHHHHHHHHHHHHC---CCEEEEEC
Confidence 5899999999999999988653 46777664
No 145
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=85.85 E-value=0.7 Score=43.16 Aligned_cols=30 Identities=20% Similarity=0.413 Sum_probs=24.2
Q ss_pred eeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEe
Q 025793 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIN 119 (248)
.+|||.|+|+||+.++|.+... .+++++.+
T Consensus 117 ~tvGIIGlG~IG~~vA~~l~~~---G~~V~~~d 146 (380)
T 2o4c_A 117 RTYGVVGAGQVGGRLVEVLRGL---GWKVLVCD 146 (380)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT---TCEEEEEC
T ss_pred CEEEEEeCCHHHHHHHHHHHHC---CCEEEEEc
Confidence 5899999999999999987653 46776654
No 146
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=85.66 E-value=0.67 Score=43.45 Aligned_cols=31 Identities=23% Similarity=0.265 Sum_probs=25.1
Q ss_pred eeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeC
Q 025793 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND 120 (248)
.+|+|.|||+||+.++|.+... .++|++.+-
T Consensus 192 ktvGIIGlG~IG~~vA~~l~a~---G~~V~~~d~ 222 (393)
T 2nac_A 192 MHVGTVAAGRIGLAVLRRLAPF---DVHLHYTDR 222 (393)
T ss_dssp CEEEEECCSHHHHHHHHHHGGG---TCEEEEECS
T ss_pred CEEEEEeECHHHHHHHHHHHhC---CCEEEEEcC
Confidence 5899999999999999987643 368777654
No 147
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=85.36 E-value=0.87 Score=39.93 Aligned_cols=32 Identities=28% Similarity=0.362 Sum_probs=25.4
Q ss_pred eeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeC
Q 025793 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (248)
Q Consensus 86 ~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND 120 (248)
..+|+|.|+|+||+.++|.+... ..+|++.+-
T Consensus 157 g~~v~IiG~G~iG~~~a~~l~~~---G~~V~~~d~ 188 (300)
T 2rir_A 157 GSQVAVLGLGRTGMTIARTFAAL---GANVKVGAR 188 (300)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHT---TCEEEEEES
T ss_pred CCEEEEEcccHHHHHHHHHHHHC---CCEEEEEEC
Confidence 35899999999999999988754 357776653
No 148
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=85.08 E-value=0.68 Score=42.12 Aligned_cols=31 Identities=23% Similarity=0.256 Sum_probs=24.3
Q ss_pred eeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeC
Q 025793 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND 120 (248)
.+|+|.|+|+||+.++|.+... .++|++.+-
T Consensus 165 ~~vgIIG~G~iG~~vA~~l~~~---G~~V~~~dr 195 (333)
T 3ba1_A 165 KRVGIIGLGRIGLAVAERAEAF---DCPISYFSR 195 (333)
T ss_dssp CCEEEECCSHHHHHHHHHHHTT---TCCEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHHC---CCEEEEECC
Confidence 5899999999999999987643 357666543
No 149
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=85.05 E-value=0.77 Score=41.52 Aligned_cols=33 Identities=24% Similarity=0.252 Sum_probs=25.5
Q ss_pred eeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeCC
Q 025793 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (248)
Q Consensus 86 ~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND~ 121 (248)
..+|+|.|+|+||+.+++.+... .++|++.+-.
T Consensus 146 g~~vgIIG~G~iG~~vA~~l~~~---G~~V~~~d~~ 178 (333)
T 2d0i_A 146 GKKVGILGMGAIGKAIARRLIPF---GVKLYYWSRH 178 (333)
T ss_dssp TCEEEEECCSHHHHHHHHHHGGG---TCEEEEECSS
T ss_pred cCEEEEEccCHHHHHHHHHHHHC---CCEEEEECCC
Confidence 35899999999999999987643 3677766543
No 150
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=84.93 E-value=0.74 Score=41.40 Aligned_cols=32 Identities=25% Similarity=0.358 Sum_probs=25.1
Q ss_pred eeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeC
Q 025793 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (248)
Q Consensus 86 ~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND 120 (248)
..+|+|.|+|+||+.+++.+... .++|++.+-
T Consensus 155 g~~vgIIG~G~iG~~iA~~l~~~---G~~V~~~d~ 186 (330)
T 2gcg_A 155 QSTVGIIGLGRIGQAIARRLKPF---GVQRFLYTG 186 (330)
T ss_dssp TCEEEEECCSHHHHHHHHHHGGG---TCCEEEEES
T ss_pred CCEEEEECcCHHHHHHHHHHHHC---CCEEEEECC
Confidence 35899999999999999987643 357776663
No 151
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=84.83 E-value=0.87 Score=41.05 Aligned_cols=33 Identities=21% Similarity=0.410 Sum_probs=25.7
Q ss_pred eeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeCC
Q 025793 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (248)
Q Consensus 86 ~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND~ 121 (248)
..+|+|.|+|+||+.+++.+... ..+|++.+-.
T Consensus 150 g~~vgIIG~G~iG~~iA~~l~~~---G~~V~~~d~~ 182 (334)
T 2dbq_A 150 GKTIGIIGLGRIGQAIAKRAKGF---NMRILYYSRT 182 (334)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT---TCEEEEECSS
T ss_pred CCEEEEEccCHHHHHHHHHHHhC---CCEEEEECCC
Confidence 35899999999999999987653 3677766543
No 152
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=84.80 E-value=0.52 Score=38.91 Aligned_cols=31 Identities=29% Similarity=0.340 Sum_probs=24.8
Q ss_pred eeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeC
Q 025793 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND 120 (248)
+||.|-|+|++|+.+++.+.++ ..++++|..
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~---g~~v~vid~ 31 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSR---KYGVVIINK 31 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHT---TCCEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHhC---CCeEEEEEC
Confidence 4799999999999999988764 356776653
No 153
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=84.33 E-value=1.3 Score=34.57 Aligned_cols=31 Identities=29% Similarity=0.336 Sum_probs=24.7
Q ss_pred eeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEe
Q 025793 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (248)
Q Consensus 86 ~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIN 119 (248)
..+|.|.|+|+||+.+++.+... ..+++++.
T Consensus 19 ~~~v~IiG~G~iG~~la~~L~~~---g~~V~vid 49 (155)
T 2g1u_A 19 SKYIVIFGCGRLGSLIANLASSS---GHSVVVVD 49 (155)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT---TCEEEEEE
T ss_pred CCcEEEECCCHHHHHHHHHHHhC---CCeEEEEE
Confidence 35899999999999999988764 35777664
No 154
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=84.07 E-value=0.76 Score=42.25 Aligned_cols=30 Identities=23% Similarity=0.229 Sum_probs=24.1
Q ss_pred eeEEEeCCChhhHHHHHHHhhCCCCCeE-EEEEe
Q 025793 87 LKVAINGFGRIGRNFLRCWHGRKDSPLD-VVVVN 119 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~~~~~l~-iVaIN 119 (248)
.+|+|.|||+||+.++|.+... .++ |++.+
T Consensus 165 ~tvgIIG~G~IG~~vA~~l~~~---G~~~V~~~d 195 (364)
T 2j6i_A 165 KTIATIGAGRIGYRVLERLVPF---NPKELLYYD 195 (364)
T ss_dssp CEEEEECCSHHHHHHHHHHGGG---CCSEEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHhC---CCcEEEEEC
Confidence 5899999999999999987643 365 77665
No 155
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=83.87 E-value=1 Score=38.53 Aligned_cols=31 Identities=23% Similarity=0.365 Sum_probs=23.4
Q ss_pred ceeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEE
Q 025793 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVV 118 (248)
Q Consensus 85 ~~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaI 118 (248)
|++||+|.|+|.||+.+++.+... ..+|.++
T Consensus 4 M~m~i~iiG~G~~G~~~a~~l~~~---g~~V~~~ 34 (299)
T 1vpd_A 4 MTMKVGFIGLGIMGKPMSKNLLKA---GYSLVVS 34 (299)
T ss_dssp --CEEEEECCSTTHHHHHHHHHHT---TCEEEEE
T ss_pred ccceEEEECchHHHHHHHHHHHhC---CCEEEEE
Confidence 567999999999999999987753 3566544
No 156
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=83.62 E-value=1 Score=42.73 Aligned_cols=30 Identities=20% Similarity=0.267 Sum_probs=24.6
Q ss_pred eeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEe
Q 025793 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIN 119 (248)
.+|||.|||+||+.++|.+... .++|++.+
T Consensus 157 ktvGIIGlG~IG~~vA~~l~~~---G~~V~~yd 186 (416)
T 3k5p_A 157 KTLGIVGYGNIGSQVGNLAESL---GMTVRYYD 186 (416)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT---TCEEEEEC
T ss_pred CEEEEEeeCHHHHHHHHHHHHC---CCEEEEEC
Confidence 5899999999999999987653 46777665
No 157
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=83.15 E-value=1.1 Score=34.84 Aligned_cols=30 Identities=17% Similarity=0.184 Sum_probs=23.7
Q ss_pred eeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEe
Q 025793 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIN 119 (248)
.+|.|-|+|++|+.+++.+... ..++++|-
T Consensus 4 ~~vlI~G~G~vG~~la~~L~~~---g~~V~vid 33 (153)
T 1id1_A 4 DHFIVCGHSILAINTILQLNQR---GQNVTVIS 33 (153)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT---TCCEEEEE
T ss_pred CcEEEECCCHHHHHHHHHHHHC---CCCEEEEE
Confidence 4799999999999999988764 35666664
No 158
>2bma_A Glutamate dehydrogenase (NADP+); malaria, drug design, analysis, oligomer organization, oxidoreductase; 2.7A {Plasmodium falciparum}
Probab=82.30 E-value=4.1 Score=39.42 Aligned_cols=101 Identities=16% Similarity=0.138 Sum_probs=62.7
Q ss_pred eeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeCC---------CChhhhhhhccccCcC-cccCceEEEecCCcEEECC
Q 025793 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS---------GGVKNASHLLKYDSLL-GTFKADVKIVDNETISVDG 156 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND~---------~~~e~~ayLLkYDStH-Gkf~g~V~v~e~~~L~inG 156 (248)
.+|+|-|||-.|..+++.+.+. .-++|+|-|. .+.+.+..|+++--.+ |+...- .+. + -+.
T Consensus 253 ~~vaVqG~GnVG~~~a~~L~~~---GakvVavsD~~G~i~dp~Gid~edl~~l~~~k~~~~g~v~~~---~~~--~-~~a 323 (470)
T 2bma_A 253 QTAVVSGSGNVALYCVQKLLHL---NVKVLTLSDSNGYVYEPNGFTHENLEFLIDLKEEKKGRIKEY---LNH--S-STA 323 (470)
T ss_dssp CEEEEECSSHHHHHHHHHHHHT---TCEECEEEETTEEEECSSCCCHHHHHHHHHHHTTTTCCGGGG---GGT--C-SSC
T ss_pred CEEEEECCcHHHHHHHHHHHHC---CCEEEEEEeCCceEECCCCCCHHHHHHHHHHHHhcCCcHHHH---Hhh--c-CCc
Confidence 5899999999999999998864 4688888884 3566666676654332 322110 000 0 011
Q ss_pred eEEEEEecCCCCCCCCCCCcccEEecCc-ccccCchhhhHHHHcCCCEE
Q 025793 157 KLIKVVSNRDPLQLPWAELGIDIVIEGT-GVFVDGPGAGKHIQAGAKKV 204 (248)
Q Consensus 157 k~I~v~~~~dP~~i~W~~~GidiVVE~T-G~F~~~e~a~~HL~~GAKKV 204 (248)
+ .+ ++.++ | +..+|+.+-|. +--.+.+.+...++.+||=|
T Consensus 324 ~---~v---~~~~~-~-~~~~DI~iPcA~~~~I~~~na~~l~~~~ak~V 364 (470)
T 2bma_A 324 K---YF---PNEKP-W-GVPCTLAFPCATQNDVDLDQAKLLQKNGCILV 364 (470)
T ss_dssp E---EC---SSCCT-T-SSCCSEEEECSSTTCBCSHHHHHHHHTTCCEE
T ss_pred E---Ee---cCcCe-e-ecCccEEEeccccCcCCHHHHHHHHhcCcEEE
Confidence 1 11 12333 8 57899999875 44556677777666677644
No 159
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=82.10 E-value=2.5 Score=34.11 Aligned_cols=30 Identities=23% Similarity=0.478 Sum_probs=23.2
Q ss_pred eeEEEeC-CChhhHHHHHHHhhCCCCCeEEEEEe
Q 025793 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVN 119 (248)
Q Consensus 87 vkV~ING-FGRIGRlvlR~~~~~~~~~l~iVaIN 119 (248)
|||.|-| -|.||+.+++.+.++ ..+|+++.
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~---g~~V~~~~ 31 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTT---DYQIYAGA 31 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTS---SCEEEEEE
T ss_pred CeEEEECCCCHHHHHHHHHHHHC---CCEEEEEE
Confidence 3788888 899999999998764 35666664
No 160
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=81.63 E-value=1.4 Score=37.54 Aligned_cols=30 Identities=17% Similarity=0.241 Sum_probs=24.3
Q ss_pred eeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEe
Q 025793 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIN 119 (248)
+||+|.|+|.||+.+++.+... ..++++++
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~---g~~V~~~~ 33 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLARA---GHQLHVTT 33 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHHT---TCEEEECC
T ss_pred CEEEEEccCHHHHHHHHHHHhC---CCEEEEEc
Confidence 6899999999999999887653 35776665
No 161
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=81.06 E-value=1.1 Score=41.71 Aligned_cols=30 Identities=33% Similarity=0.560 Sum_probs=24.7
Q ss_pred eeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEe
Q 025793 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIN 119 (248)
.+|.|-||||+|+.++|.+... ..++++|-
T Consensus 5 ~~viIiG~Gr~G~~va~~L~~~---g~~vvvId 34 (413)
T 3l9w_A 5 MRVIIAGFGRFGQITGRLLLSS---GVKMVVLD 34 (413)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT---TCCEEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHHC---CCCEEEEE
Confidence 4799999999999999998764 46777773
No 162
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=80.76 E-value=1.5 Score=36.64 Aligned_cols=33 Identities=21% Similarity=0.354 Sum_probs=26.1
Q ss_pred eeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeCC
Q 025793 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (248)
Q Consensus 86 ~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND~ 121 (248)
++||+|.|.|.+|+.+++.+... ..+++.+.|.
T Consensus 23 mmkI~IIG~G~mG~~la~~l~~~---g~~V~~v~~r 55 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFTAA---QIPAIIANSR 55 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHHHT---TCCEEEECTT
T ss_pred CCEEEEECCCHHHHHHHHHHHhC---CCEEEEEECC
Confidence 46999999999999999988764 3566665665
No 163
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=80.57 E-value=1.2 Score=35.55 Aligned_cols=32 Identities=25% Similarity=0.225 Sum_probs=24.2
Q ss_pred eeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeC
Q 025793 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND 120 (248)
.+|.|.|+|++|+.+++.+.... ..+++++..
T Consensus 40 ~~v~IiG~G~~G~~~a~~L~~~~--g~~V~vid~ 71 (183)
T 3c85_A 40 AQVLILGMGRIGTGAYDELRARY--GKISLGIEI 71 (183)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHH--CSCEEEEES
T ss_pred CcEEEECCCHHHHHHHHHHHhcc--CCeEEEEEC
Confidence 57999999999999999876520 256666643
No 164
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=80.14 E-value=1.4 Score=37.17 Aligned_cols=24 Identities=13% Similarity=0.309 Sum_probs=20.6
Q ss_pred ceeeEEEeCCChhhHHHHHHHhhC
Q 025793 85 AKLKVAINGFGRIGRNFLRCWHGR 108 (248)
Q Consensus 85 ~~vkV~INGFGRIGRlvlR~~~~~ 108 (248)
|++||+|.|.|.+|+.+++.+...
T Consensus 1 M~~~i~iIG~G~mG~~~a~~l~~~ 24 (247)
T 3gt0_A 1 MDKQIGFIGCGNMGMAMIGGMINK 24 (247)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHT
T ss_pred CCCeEEEECccHHHHHHHHHHHhC
Confidence 346899999999999999988764
No 165
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=79.64 E-value=1.7 Score=41.77 Aligned_cols=31 Identities=26% Similarity=0.285 Sum_probs=25.2
Q ss_pred eeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeC
Q 025793 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND 120 (248)
.+|+|.|||+||+.+++.+... .++|++.+-
T Consensus 143 ~~vgIIG~G~IG~~vA~~l~~~---G~~V~~~d~ 173 (529)
T 1ygy_A 143 KTVGVVGLGRIGQLVAQRIAAF---GAYVVAYDP 173 (529)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT---TCEEEEECT
T ss_pred CEEEEEeeCHHHHHHHHHHHhC---CCEEEEECC
Confidence 5899999999999999988653 468777643
No 166
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=79.44 E-value=1.7 Score=42.04 Aligned_cols=30 Identities=20% Similarity=0.374 Sum_probs=23.8
Q ss_pred eeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEe
Q 025793 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIN 119 (248)
.+|+|.|||+||+.+++.+... ..+|++.+
T Consensus 248 KTVgVIG~G~IGr~vA~~lraf---Ga~Viv~d 277 (464)
T 3n58_A 248 KVAVVCGYGDVGKGSAQSLAGA---GARVKVTE 277 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT---TCEEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHHC---CCEEEEEe
Confidence 4799999999999999987653 35766553
No 167
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=79.27 E-value=2 Score=38.44 Aligned_cols=94 Identities=19% Similarity=0.246 Sum_probs=51.8
Q ss_pred eEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeCCCChhhhhhhc-cccCcCcccCceEEEecCCcEEECCeEEEEEecCC
Q 025793 88 KVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLL-KYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRD 166 (248)
Q Consensus 88 kV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND~~~~e~~ayLL-kYDStHGkf~g~V~v~e~~~L~inGk~I~v~~~~d 166 (248)
+|.|.|.|.||..+++++... ..+++++-.. .+.+..+. ++ | .+..++..+. ..
T Consensus 190 ~VlV~GaG~vG~~~~q~a~~~---Ga~Vi~~~~~--~~~~~~~~~~l----G---a~~v~~~~~~-------------~~ 244 (366)
T 1yqd_A 190 HIGIVGLGGLGHVAVKFAKAF---GSKVTVISTS--PSKKEEALKNF----G---ADSFLVSRDQ-------------EQ 244 (366)
T ss_dssp EEEEECCSHHHHHHHHHHHHT---TCEEEEEESC--GGGHHHHHHTS----C---CSEEEETTCH-------------HH
T ss_pred EEEEECCCHHHHHHHHHHHHC---CCEEEEEeCC--HHHHHHHHHhc----C---CceEEeccCH-------------HH
Confidence 699999999999999887654 2466666432 22332222 22 2 1111111100 00
Q ss_pred CCCCCCCCCcccEEecCcccccCchhhhHHHHcCCCEEEEcCC
Q 025793 167 PLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (248)
Q Consensus 167 P~~i~W~~~GidiVVE~TG~F~~~e~a~~HL~~GAKKVIISAP 209 (248)
..++ . -|+|+||||+|.-...+.+-..|+.|.+=|++..+
T Consensus 245 ~~~~--~-~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~ 284 (366)
T 1yqd_A 245 MQAA--A-GTLDGIIDTVSAVHPLLPLFGLLKSHGKLILVGAP 284 (366)
T ss_dssp HHHT--T-TCEEEEEECCSSCCCSHHHHHHEEEEEEEEECCCC
T ss_pred HHHh--h-CCCCEEEECCCcHHHHHHHHHHHhcCCEEEEEccC
Confidence 0011 1 28999999999754555666677665544455444
No 168
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=79.24 E-value=1.7 Score=41.98 Aligned_cols=30 Identities=20% Similarity=0.399 Sum_probs=24.4
Q ss_pred eeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEe
Q 025793 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIN 119 (248)
.+|+|.|||+||+.++|.+... ..+|++.+
T Consensus 278 ktVgIIG~G~IG~~vA~~l~~~---G~~V~v~d 307 (494)
T 3d64_A 278 KIAVVAGYGDVGKGCAQSLRGL---GATVWVTE 307 (494)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT---TCEEEEEC
T ss_pred CEEEEEccCHHHHHHHHHHHHC---CCEEEEEe
Confidence 5899999999999999988653 36776664
No 169
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=79.11 E-value=1.8 Score=36.05 Aligned_cols=32 Identities=31% Similarity=0.349 Sum_probs=23.6
Q ss_pred ceeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEe
Q 025793 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (248)
Q Consensus 85 ~~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIN 119 (248)
+.+||+|.|.|.||+.+++.+... ..++++++
T Consensus 27 ~~~~I~iiG~G~~G~~la~~l~~~---g~~V~~~~ 58 (215)
T 2vns_A 27 EAPKVGILGSGDFARSLATRLVGS---GFKVVVGS 58 (215)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHT---TCCEEEEE
T ss_pred CCCEEEEEccCHHHHHHHHHHHHC---CCEEEEEe
Confidence 346899999999999999987754 24665554
No 170
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=79.04 E-value=2.1 Score=36.82 Aligned_cols=32 Identities=25% Similarity=0.393 Sum_probs=25.3
Q ss_pred ceeeEEEeCC-ChhhHHHHHHHhhCCCCCeEEEEEe
Q 025793 85 AKLKVAINGF-GRIGRNFLRCWHGRKDSPLDVVVVN 119 (248)
Q Consensus 85 ~~vkV~INGF-GRIGRlvlR~~~~~~~~~l~iVaIN 119 (248)
|++||+|.|+ |.+|+.+++.+... ..+|++++
T Consensus 10 mmm~I~iIG~tG~mG~~la~~l~~~---g~~V~~~~ 42 (286)
T 3c24_A 10 GPKTVAILGAGGKMGARITRKIHDS---AHHLAAIE 42 (286)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHHS---SSEEEEEC
T ss_pred cCCEEEEECCCCHHHHHHHHHHHhC---CCEEEEEE
Confidence 4469999999 99999999988754 35776554
No 171
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=78.54 E-value=2.1 Score=36.69 Aligned_cols=31 Identities=16% Similarity=0.337 Sum_probs=24.2
Q ss_pred eeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEe
Q 025793 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (248)
Q Consensus 86 ~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIN 119 (248)
++||+|.|+|.||+.+++.+... ..++++++
T Consensus 4 ~~~i~iiG~G~~G~~~a~~l~~~---g~~V~~~~ 34 (301)
T 3cky_A 4 SIKIGFIGLGAMGKPMAINLLKE---GVTVYAFD 34 (301)
T ss_dssp CCEEEEECCCTTHHHHHHHHHHT---TCEEEEEC
T ss_pred CCEEEEECccHHHHHHHHHHHHC---CCeEEEEe
Confidence 46899999999999999987653 35766553
No 172
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=78.36 E-value=2.1 Score=37.20 Aligned_cols=32 Identities=22% Similarity=0.296 Sum_probs=24.9
Q ss_pred ceeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEe
Q 025793 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (248)
Q Consensus 85 ~~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIN 119 (248)
+++||+|.|+|.+|..+++.+... ..+|++.+
T Consensus 6 ~~~~I~iIG~G~mG~~~a~~l~~~---G~~V~~~d 37 (303)
T 3g0o_A 6 TDFHVGIVGLGSMGMGAARSCLRA---GLSTWGAD 37 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHT---TCEEEEEC
T ss_pred CCCeEEEECCCHHHHHHHHHHHHC---CCeEEEEE
Confidence 446899999999999999988764 35776664
No 173
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=78.09 E-value=2 Score=41.11 Aligned_cols=31 Identities=23% Similarity=0.439 Sum_probs=24.2
Q ss_pred eeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeCC
Q 025793 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND~ 121 (248)
.+|+|.|+|+||+.+++.+... ..+|++. |+
T Consensus 212 ktVgIiG~G~IG~~vA~~Lka~---Ga~Viv~-D~ 242 (436)
T 3h9u_A 212 KTACVCGYGDVGKGCAAALRGF---GARVVVT-EV 242 (436)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT---TCEEEEE-CS
T ss_pred CEEEEEeeCHHHHHHHHHHHHC---CCEEEEE-CC
Confidence 5899999999999999988754 3576554 44
No 174
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=77.84 E-value=2.2 Score=37.94 Aligned_cols=34 Identities=18% Similarity=0.216 Sum_probs=24.8
Q ss_pred ceeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEe
Q 025793 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (248)
Q Consensus 85 ~~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIN 119 (248)
+.+||+|.|+|.||+.+++.+... +...+|++.+
T Consensus 32 ~~~kI~IIG~G~mG~slA~~l~~~-G~~~~V~~~d 65 (314)
T 3ggo_A 32 SMQNVLIVGVGFMGGSFAKSLRRS-GFKGKIYGYD 65 (314)
T ss_dssp SCSEEEEESCSHHHHHHHHHHHHT-TCCSEEEEEC
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhC-CCCCEEEEEE
Confidence 346899999999999999988764 2112666553
No 175
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=77.76 E-value=2.3 Score=37.66 Aligned_cols=95 Identities=17% Similarity=0.139 Sum_probs=61.4
Q ss_pred eeeEEEeCC-ChhhHHHHHHHhhCCCCCeEEEEEeCCCChhhhhhhccccCcCcccCceEEEecCCcEEECCeEEEEEec
Q 025793 86 KLKVAINGF-GRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (248)
Q Consensus 86 ~vkV~INGF-GRIGRlvlR~~~~~~~~~l~iVaIND~~~~e~~ayLLkYDStHGkf~g~V~v~e~~~L~inGk~I~v~~~ 164 (248)
++||||.|+ |+||+..++++... +.++|+|-|+.. +. + +.+.. |.+ +.+ +.
T Consensus 3 mirvgiIG~gG~i~~~h~~~l~~~---~~~lvav~d~~~-~~-~---~~~~~---~~~-~~~---------------~~- 54 (318)
T 3oa2_A 3 MKNFALIGAAGYIAPRHMRAIKDT---GNCLVSAYDIND-SV-G---IIDSI---SPQ-SEF---------------FT- 54 (318)
T ss_dssp CCEEEEETTTSSSHHHHHHHHHHT---TCEEEEEECSSC-CC-G---GGGGT---CTT-CEE---------------ES-
T ss_pred ceEEEEECCCcHHHHHHHHHHHhC---CCEEEEEEcCCH-HH-H---HHHhh---CCC-CcE---------------EC-
Confidence 479999999 79999999987653 579999999732 21 1 11111 111 111 11
Q ss_pred CCCCCCC--------CCCCcccEEecCcccccCchhhhHHHHcCCCEEEEcCCC
Q 025793 165 RDPLQLP--------WAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPA 210 (248)
Q Consensus 165 ~dP~~i~--------W~~~GidiVVE~TG~F~~~e~a~~HL~~GAKKVIISAPs 210 (248)
|.+++. +.+-++|+|+-||--....+-+..=|++| |-|++=-|-
T Consensus 55 -~~~~ll~~~~~l~~~~~~~vD~V~I~tP~~~H~~~~~~al~aG-khVl~EKPl 106 (318)
T 3oa2_A 55 -EFEFFLDHASNLKRDSATALDYVSICSPNYLHYPHIAAGLRLG-CDVICEKPL 106 (318)
T ss_dssp -SHHHHHHHHHHHTTSTTTSCCEEEECSCGGGHHHHHHHHHHTT-CEEEECSSC
T ss_pred -CHHHHHHhhhhhhhccCCCCcEEEECCCcHHHHHHHHHHHHCC-CeEEEECCC
Confidence 111110 12347899999999888878888888888 668876663
No 176
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=77.61 E-value=8.6 Score=30.26 Aligned_cols=87 Identities=15% Similarity=0.003 Sum_probs=52.9
Q ss_pred eeEEEeCC----ChhhHHHHHHHhhCCCCCeEEEEEeCCCChhhhhhhccccCcCcccCceEEEecCCcEEECCeEEEEE
Q 025793 87 LKVAINGF----GRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVV 162 (248)
Q Consensus 87 vkV~INGF----GRIGRlvlR~~~~~~~~~l~iVaIND~~~~e~~ayLLkYDStHGkf~g~V~v~e~~~L~inGk~I~v~ 162 (248)
.+|+|.|. |++|+.++|.+.+. .+++..||-. +. ++. +.|.+ +
T Consensus 14 ~~vaVvGas~~~g~~G~~~~~~l~~~---G~~v~~vnp~----~~-----~~~------------------i~G~~--~- 60 (140)
T 1iuk_A 14 KTIAVLGAHKDPSRPAHYVPRYLREQ---GYRVLPVNPR----FQ-----GEE------------------LFGEE--A- 60 (140)
T ss_dssp CEEEEETCCSSTTSHHHHHHHHHHHT---TCEEEEECGG----GT-----TSE------------------ETTEE--C-
T ss_pred CEEEEECCCCCCCChHHHHHHHHHHC---CCEEEEeCCC----cc-----cCc------------------CCCEE--e-
Confidence 47999999 89999999987753 3577777622 10 111 22321 1
Q ss_pred ecCCCCCCCCCCCcccEEecCcccccCchhhhHHHHcCCCEEEEcCCC
Q 025793 163 SNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPA 210 (248)
Q Consensus 163 ~~~dP~~i~W~~~GidiVVE~TG~F~~~e~a~~HL~~GAKKVIISAPs 210 (248)
-.+.++++- .+|+++=++-.-...+-+..-.+.|+|.++++++.
T Consensus 61 -~~sl~el~~---~vDlavi~vp~~~~~~v~~~~~~~gi~~i~~~~g~ 104 (140)
T 1iuk_A 61 -VASLLDLKE---PVDILDVFRPPSALMDHLPEVLALRPGLVWLQSGI 104 (140)
T ss_dssp -BSSGGGCCS---CCSEEEECSCHHHHTTTHHHHHHHCCSCEEECTTC
T ss_pred -cCCHHHCCC---CCCEEEEEeCHHHHHHHHHHHHHcCCCEEEEcCCc
Confidence 123444542 68887766655333344445556799999987653
No 177
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=77.56 E-value=2.4 Score=37.63 Aligned_cols=33 Identities=18% Similarity=0.337 Sum_probs=25.4
Q ss_pred ceeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEe
Q 025793 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (248)
Q Consensus 85 ~~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIN 119 (248)
|.+||+|.|+|.+|..+++.+... + ..+|++.|
T Consensus 23 M~m~IgvIG~G~mG~~lA~~L~~~-G-~~~V~~~d 55 (317)
T 4ezb_A 23 MMTTIAFIGFGEAAQSIAGGLGGR-N-AARLAAYD 55 (317)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTT-T-CSEEEEEC
T ss_pred cCCeEEEECccHHHHHHHHHHHHc-C-CCeEEEEe
Confidence 667999999999999999988753 2 15666554
No 178
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=77.46 E-value=2.4 Score=35.93 Aligned_cols=32 Identities=28% Similarity=0.441 Sum_probs=23.8
Q ss_pred ceeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEe
Q 025793 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (248)
Q Consensus 85 ~~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIN 119 (248)
+++||+|.|.|.+|..+++.+... ..+|+.++
T Consensus 2 ~~m~i~iiG~G~~G~~~a~~l~~~---g~~V~~~~ 33 (316)
T 2ew2_A 2 NAMKIAIAGAGAMGSRLGIMLHQG---GNDVTLID 33 (316)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHT---TCEEEEEC
T ss_pred CCCeEEEECcCHHHHHHHHHHHhC---CCcEEEEE
Confidence 346999999999999999887653 24666664
No 179
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=77.03 E-value=2 Score=31.88 Aligned_cols=30 Identities=27% Similarity=0.499 Sum_probs=23.0
Q ss_pred eeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEe
Q 025793 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIN 119 (248)
.+|.|.|.|+||+.+++.+... ..+++++.
T Consensus 7 ~~v~I~G~G~iG~~~a~~l~~~---g~~v~~~d 36 (144)
T 2hmt_A 7 KQFAVIGLGRFGGSIVKELHRM---GHEVLAVD 36 (144)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT---TCCCEEEE
T ss_pred CcEEEECCCHHHHHHHHHHHHC---CCEEEEEe
Confidence 3699999999999999988764 24555553
No 180
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=76.92 E-value=2.5 Score=35.55 Aligned_cols=21 Identities=19% Similarity=0.520 Sum_probs=19.0
Q ss_pred eeEEEeCCChhhHHHHHHHhh
Q 025793 87 LKVAINGFGRIGRNFLRCWHG 107 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~ 107 (248)
+||+|.|+|.||+.+++.+..
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~ 24 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQ 24 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTT
T ss_pred cEEEEECCCHHHHHHHHHHHh
Confidence 689999999999999998764
No 181
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=76.83 E-value=1.7 Score=41.02 Aligned_cols=31 Identities=26% Similarity=0.502 Sum_probs=25.2
Q ss_pred eeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEe
Q 025793 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (248)
Q Consensus 86 ~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIN 119 (248)
.|||.|-|+||+|+.++|.+.+ ...++++|-
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~---~~~~v~vId 33 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVG---ENNDITIVD 33 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCS---TTEEEEEEE
T ss_pred cCEEEEECCCHHHHHHHHHHHH---CCCCEEEEE
Confidence 3689999999999999998754 347888774
No 182
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=76.45 E-value=2.7 Score=36.14 Aligned_cols=30 Identities=20% Similarity=0.266 Sum_probs=24.0
Q ss_pred eeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEe
Q 025793 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIN 119 (248)
+||+|.|+|.||+.+++.+... ..+|++.+
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~---G~~V~~~d 31 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKA---GCSVTIWN 31 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT---TCEEEEEC
T ss_pred CEEEEEeecHHHHHHHHHHHHC---CCeEEEEc
Confidence 5899999999999999988764 35766554
No 183
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=76.17 E-value=2.3 Score=38.59 Aligned_cols=35 Identities=20% Similarity=0.127 Sum_probs=28.0
Q ss_pred ceeeEEEeCCCh---hhHHHHHHHhhCCCCCeEEEE-EeCC
Q 025793 85 AKLKVAINGFGR---IGRNFLRCWHGRKDSPLDVVV-VNDS 121 (248)
Q Consensus 85 ~~vkV~INGFGR---IGRlvlR~~~~~~~~~l~iVa-IND~ 121 (248)
.++||||.|+|+ ||+..++++... +.+++|+ |-|+
T Consensus 11 ~~~rvgiiG~G~~~~ig~~h~~~~~~~--~~~~lva~v~d~ 49 (398)
T 3dty_A 11 QPIRWAMVGGGSQSQIGYIHRCAALRD--NTFVLVAGAFDI 49 (398)
T ss_dssp SCEEEEEEECCTTCSSHHHHHHHHHGG--GSEEEEEEECCS
T ss_pred CcceEEEEcCCccchhHHHHHHHHhhC--CCeEEEEEEeCC
Confidence 468999999999 999888776432 4589998 7777
No 184
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=76.13 E-value=2.5 Score=37.24 Aligned_cols=31 Identities=23% Similarity=0.234 Sum_probs=24.7
Q ss_pred eeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEe
Q 025793 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (248)
Q Consensus 86 ~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIN 119 (248)
.+||+|.|+|.+|+.+++.+... ..+|++.+
T Consensus 31 ~~~I~iIG~G~mG~~~a~~l~~~---G~~V~~~d 61 (320)
T 4dll_A 31 ARKITFLGTGSMGLPMARRLCEA---GYALQVWN 61 (320)
T ss_dssp CSEEEEECCTTTHHHHHHHHHHT---TCEEEEEC
T ss_pred CCEEEEECccHHHHHHHHHHHhC---CCeEEEEc
Confidence 46899999999999999988764 35766654
No 185
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=76.12 E-value=5 Score=34.70 Aligned_cols=87 Identities=16% Similarity=0.153 Sum_probs=48.0
Q ss_pred eeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeCCCChhhhhhhccccCcCcccCceEEEecCCcEEECCeEEEEEecCC
Q 025793 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRD 166 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND~~~~e~~ayLLkYDStHGkf~g~V~v~e~~~L~inGk~I~v~~~~d 166 (248)
-+|.|+|-|.||.+.+.++... ..+++++-.+ +.+.++.++ | .+.. +| |
T Consensus 144 ~~VlV~GaG~vG~~a~qlak~~---Ga~Vi~~~~~---~~~~~~~~l----G---a~~v--------~~----------d 192 (315)
T 3goh_A 144 REVLIVGFGAVNNLLTQMLNNA---GYVVDLVSAS---LSQALAAKR----G---VRHL--------YR----------E 192 (315)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH---TCEEEEECSS---CCHHHHHHH----T---EEEE--------ES----------S
T ss_pred CEEEEECCCHHHHHHHHHHHHc---CCEEEEEECh---hhHHHHHHc----C---CCEE--------Ec----------C
Confidence 4799999999999988887543 2477777522 333333222 2 1111 11 1
Q ss_pred CCCCCCCCCcccEEecCcccccCchhhhHHHHcCCCEEEEcC
Q 025793 167 PLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITA 208 (248)
Q Consensus 167 P~~i~W~~~GidiVVE~TG~F~~~e~a~~HL~~GAKKVIISA 208 (248)
.+++ ..|+|+|+||+|.-.. +.+...|+.|-+-|++..
T Consensus 193 ~~~v---~~g~Dvv~d~~g~~~~-~~~~~~l~~~G~~v~~g~ 230 (315)
T 3goh_A 193 PSQV---TQKYFAIFDAVNSQNA-AALVPSLKANGHIICIQD 230 (315)
T ss_dssp GGGC---CSCEEEEECC--------TTGGGEEEEEEEEEECC
T ss_pred HHHh---CCCccEEEECCCchhH-HHHHHHhcCCCEEEEEeC
Confidence 3334 4599999999997443 445566666655555533
No 186
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=76.03 E-value=2.8 Score=35.48 Aligned_cols=39 Identities=18% Similarity=0.273 Sum_probs=27.1
Q ss_pred eeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeCCCChhhhhhh
Q 025793 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHL 130 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND~~~~e~~ayL 130 (248)
+||+|.|+|.||+.+++.+... ..+|+++ |. +.+.+..+
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~---g~~V~~~-~~-~~~~~~~~ 39 (279)
T 2f1k_A 1 MKIGVVGLGLIGASLAGDLRRR---GHYLIGV-SR-QQSTCEKA 39 (279)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT---TCEEEEE-CS-CHHHHHHH
T ss_pred CEEEEEcCcHHHHHHHHHHHHC---CCEEEEE-EC-CHHHHHHH
Confidence 4799999999999999988753 2576665 44 33444333
No 187
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=75.98 E-value=1.9 Score=41.51 Aligned_cols=30 Identities=23% Similarity=0.417 Sum_probs=24.2
Q ss_pred eeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEe
Q 025793 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIN 119 (248)
.+|+|.|+|+||+.+++.+... ..+|++.+
T Consensus 258 ktVgIIG~G~IG~~vA~~l~~~---G~~Viv~d 287 (479)
T 1v8b_A 258 KIVVICGYGDVGKGCASSMKGL---GARVYITE 287 (479)
T ss_dssp SEEEEECCSHHHHHHHHHHHHH---TCEEEEEC
T ss_pred CEEEEEeeCHHHHHHHHHHHhC---cCEEEEEe
Confidence 5799999999999999987653 36777664
No 188
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=75.83 E-value=2 Score=37.48 Aligned_cols=31 Identities=26% Similarity=0.389 Sum_probs=24.0
Q ss_pred eeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEe
Q 025793 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (248)
Q Consensus 86 ~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIN 119 (248)
++||+|.|+|.+|+.+++.+... ..+|++.+
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~---G~~V~~~d 45 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEW---PGGVTVYD 45 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTS---TTCEEEEC
T ss_pred CCeEEEECcCHHHHHHHHHHHHC---CCeEEEEe
Confidence 46899999999999999987653 35665554
No 189
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=75.64 E-value=2.8 Score=38.82 Aligned_cols=31 Identities=23% Similarity=0.416 Sum_probs=26.1
Q ss_pred eeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeCC
Q 025793 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND~ 121 (248)
.+|+|-|||+||+.+++.+.+. ..+|| +-|+
T Consensus 176 ktV~I~G~GnVG~~~A~~l~~~---GakVv-vsD~ 206 (355)
T 1c1d_A 176 LTVLVQGLGAVGGSLASLAAEA---GAQLL-VADT 206 (355)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT---TCEEE-EECS
T ss_pred CEEEEECcCHHHHHHHHHHHHC---CCEEE-EEeC
Confidence 4799999999999999988764 36877 7776
No 190
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=75.25 E-value=2.7 Score=35.45 Aligned_cols=32 Identities=16% Similarity=0.310 Sum_probs=24.4
Q ss_pred eeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeCC
Q 025793 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND~ 121 (248)
+||+|.|+|++|+.+++.+... ..++|.+-|.
T Consensus 11 m~i~iiG~G~mG~~~a~~l~~~---g~~~v~~~~~ 42 (266)
T 3d1l_A 11 TPIVLIGAGNLATNLAKALYRK---GFRIVQVYSR 42 (266)
T ss_dssp CCEEEECCSHHHHHHHHHHHHH---TCCEEEEECS
T ss_pred CeEEEEcCCHHHHHHHHHHHHC---CCeEEEEEeC
Confidence 6899999999999999887653 2554555554
No 191
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=75.19 E-value=1.2 Score=41.13 Aligned_cols=100 Identities=15% Similarity=0.156 Sum_probs=52.3
Q ss_pred eeEEEeCCChhhHHHHHHHhhCCCCCe--EEEEEeCC-CChhhhhhhccccCcCcccCceEEEecCCcEEECCeEEEEEe
Q 025793 87 LKVAINGFGRIGRNFLRCWHGRKDSPL--DVVVVNDS-GGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVS 163 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~~~~~l--~iVaIND~-~~~e~~ayLLkYDStHGkf~g~V~v~e~~~L~inGk~I~v~~ 163 (248)
.||+|.|.|.||+.++|.+.... .+ ++++..-. ..++.++.-+.-. + ...+... ...
T Consensus 2 ~kVlIiGaGgiG~~ia~~L~~~g--~~~~~V~v~~r~~~~~~~la~~l~~~---~--~~~~~~~-------------~~D 61 (405)
T 4ina_A 2 AKVLQIGAGGVGGVVAHKMAMNR--EVFSHITLASRTLSKCQEIAQSIKAK---G--YGEIDIT-------------TVD 61 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHTCT--TTCCEEEEEESCHHHHHHHHHHHHHT---T--CCCCEEE-------------ECC
T ss_pred CEEEEECCCHHHHHHHHHHHhCC--CCceEEEEEECCHHHHHHHHHHhhhh---c--CCceEEE-------------Eec
Confidence 48999999999999999887642 33 44433221 2233333222110 0 0011110 000
Q ss_pred cCCCCCCC--CCCCcccEEecCcccccCchhhhHHHHcCCCEEEE
Q 025793 164 NRDPLQLP--WAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVII 206 (248)
Q Consensus 164 ~~dP~~i~--W~~~GidiVVE~TG~F~~~e~a~~HL~~GAKKVII 206 (248)
..|++.+. -.+.++|+||.|+|.+...+-+..-+++|.+-|-+
T Consensus 62 ~~d~~~l~~~l~~~~~DvVin~ag~~~~~~v~~a~l~~g~~vvD~ 106 (405)
T 4ina_A 62 ADSIEELVALINEVKPQIVLNIALPYQDLTIMEACLRTGVPYLDT 106 (405)
T ss_dssp TTCHHHHHHHHHHHCCSEEEECSCGGGHHHHHHHHHHHTCCEEES
T ss_pred CCCHHHHHHHHHhhCCCEEEECCCcccChHHHHHHHHhCCCEEEe
Confidence 11111110 01124899999999987766666677778764433
No 192
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=74.86 E-value=3.3 Score=34.98 Aligned_cols=32 Identities=22% Similarity=0.368 Sum_probs=24.8
Q ss_pred ceeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEe
Q 025793 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (248)
Q Consensus 85 ~~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIN 119 (248)
+..||+|.|+|.+|..+++.+... ..+|++.+
T Consensus 18 ~~~kIgiIG~G~mG~alA~~L~~~---G~~V~~~~ 49 (245)
T 3dtt_A 18 QGMKIAVLGTGTVGRTMAGALADL---GHEVTIGT 49 (245)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHT---TCEEEEEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHHC---CCEEEEEe
Confidence 346899999999999999988764 35666654
No 193
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=74.67 E-value=3 Score=35.89 Aligned_cols=30 Identities=17% Similarity=0.227 Sum_probs=24.3
Q ss_pred eeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEe
Q 025793 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIN 119 (248)
+||+|.|+|.+|+.+++.+... ..+|++++
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~---G~~V~~~d 33 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKA---GYLLNVFD 33 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT---TCEEEEEC
T ss_pred CEEEEEeecHHHHHHHHHHHhC---CCeEEEEc
Confidence 5899999999999999988764 35766663
No 194
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=74.66 E-value=2.8 Score=40.12 Aligned_cols=29 Identities=21% Similarity=0.349 Sum_probs=23.2
Q ss_pred eeEEEeCCChhhHHHHHHHhhCCCCCeEEEEE
Q 025793 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVV 118 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaI 118 (248)
.+|+|.|+|+||+.+++.+... ..+|++.
T Consensus 221 ktV~ViG~G~IGk~vA~~Lra~---Ga~Viv~ 249 (435)
T 3gvp_A 221 KQVVVCGYGEVGKGCCAALKAM---GSIVYVT 249 (435)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT---TCEEEEE
T ss_pred CEEEEEeeCHHHHHHHHHHHHC---CCEEEEE
Confidence 4799999999999999988654 3576654
No 195
>1vm6_A DHPR, dihydrodipicolinate reductase; TM1520, structural genomics, protein structure initiative, PSI, joint center for structu genomics; HET: NAD PG4; 2.27A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3
Probab=74.50 E-value=5.1 Score=35.26 Aligned_cols=33 Identities=24% Similarity=0.537 Sum_probs=25.8
Q ss_pred eeeEEEeCC-ChhhHHHHHHHhhCCCCCeEEEEEeCC
Q 025793 86 KLKVAINGF-GRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (248)
Q Consensus 86 ~vkV~INGF-GRIGRlvlR~~~~~~~~~l~iVaIND~ 121 (248)
.+|-.|+|. ||+||.+.+++.. +.+++|+.-|.
T Consensus 12 ~~~~~v~Ga~GrMG~~i~~~~~~---~~~elv~~id~ 45 (228)
T 1vm6_A 12 HMKYGIVGYSGRMGQEIQKVFSE---KGHELVLKVDV 45 (228)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHH---TTCEEEEEEET
T ss_pred cceeEEEEecCHHHHHHHHHHhC---CCCEEEEEEcC
Confidence 478999998 9999999887532 45888887654
No 196
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=74.42 E-value=3.3 Score=36.25 Aligned_cols=31 Identities=23% Similarity=0.327 Sum_probs=24.7
Q ss_pred eeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEe
Q 025793 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (248)
Q Consensus 86 ~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIN 119 (248)
++||+|.|+|.+|+.+++.+... ..+|++.|
T Consensus 21 m~~I~iIG~G~mG~~~A~~l~~~---G~~V~~~d 51 (310)
T 3doj_A 21 MMEVGFLGLGIMGKAMSMNLLKN---GFKVTVWN 51 (310)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHT---TCEEEEEC
T ss_pred CCEEEEECccHHHHHHHHHHHHC---CCeEEEEe
Confidence 36899999999999999988764 35766654
No 197
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=74.05 E-value=2.6 Score=36.97 Aligned_cols=32 Identities=19% Similarity=0.318 Sum_probs=24.9
Q ss_pred ceeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEe
Q 025793 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (248)
Q Consensus 85 ~~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIN 119 (248)
+.+||+|.|+|.+|+.+++.+... ..+|++.|
T Consensus 8 ~~~~IgiIG~G~mG~~~A~~l~~~---G~~V~~~d 39 (306)
T 3l6d_A 8 FEFDVSVIGLGAMGTIMAQVLLKQ---GKRVAIWN 39 (306)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHT---TCCEEEEC
T ss_pred CCCeEEEECCCHHHHHHHHHHHHC---CCEEEEEe
Confidence 346899999999999999988764 35666554
No 198
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=73.42 E-value=4.1 Score=36.15 Aligned_cols=89 Identities=19% Similarity=0.167 Sum_probs=51.4
Q ss_pred eeeEEEeCC-ChhhHHHHHHHhhCCCCCeEEE-EEeCCCChhhhhhhccccCcCcccCceEEEecCCcEEECCeEEEEEe
Q 025793 86 KLKVAINGF-GRIGRNFLRCWHGRKDSPLDVV-VVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVS 163 (248)
Q Consensus 86 ~vkV~INGF-GRIGRlvlR~~~~~~~~~l~iV-aIND~~~~e~~ayLLkYDStHGkf~g~V~v~e~~~L~inGk~I~v~~ 163 (248)
..||+|.|+ |+.|+.+++.+.+. .+++| .|| |... |. + +.|. +++.
T Consensus 7 ~~~VaVvGasG~~G~~~~~~l~~~---g~~~v~~Vn-P~~~-------------g~---~----------i~G~--~vy~ 54 (288)
T 1oi7_A 7 ETRVLVQGITGREGQFHTKQMLTY---GTKIVAGVT-PGKG-------------GM---E----------VLGV--PVYD 54 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHH---TCEEEEEEC-TTCT-------------TC---E----------ETTE--EEES
T ss_pred CCEEEEECCCCCHHHHHHHHHHHc---CCeEEEEEC-CCCC-------------Cc---e----------ECCE--EeeC
Confidence 368999999 99999999987653 36666 454 4110 00 0 2231 2221
Q ss_pred cCCCCCCCCCCCcccEEecCcccccCchhhhHHHHcCCCEEEEcCC
Q 025793 164 NRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (248)
Q Consensus 164 ~~dP~~i~W~~~GidiVVE~TG~F~~~e~a~~HL~~GAKKVIISAP 209 (248)
+.++++- +..+|++|.+|---...+-+..-++.|++.+|+-+.
T Consensus 55 --sl~el~~-~~~~Dv~Ii~vp~~~~~~~~~ea~~~Gi~~vVi~t~ 97 (288)
T 1oi7_A 55 --TVKEAVA-HHEVDASIIFVPAPAAADAALEAAHAGIPLIVLITE 97 (288)
T ss_dssp --SHHHHHH-HSCCSEEEECCCHHHHHHHHHHHHHTTCSEEEECCS
T ss_pred --CHHHHhh-cCCCCEEEEecCHHHHHHHHHHHHHCCCCEEEEECC
Confidence 1222211 226788887776655555555666678886665443
No 199
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=73.23 E-value=2.9 Score=38.47 Aligned_cols=36 Identities=25% Similarity=0.369 Sum_probs=28.1
Q ss_pred ceeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeCCC
Q 025793 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSG 122 (248)
Q Consensus 85 ~~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND~~ 122 (248)
.++||+|-|.| +|+.-++++... ...+++|+|-|..
T Consensus 6 ~~~rv~VvG~G-~g~~h~~a~~~~-~~~~elvav~~~~ 41 (372)
T 4gmf_A 6 PKQRVLIVGAK-FGEMYLNAFMQP-PEGLELVGLLAQG 41 (372)
T ss_dssp -CEEEEEECST-TTHHHHHTTSSC-CTTEEEEEEECCS
T ss_pred CCCEEEEEehH-HHHHHHHHHHhC-CCCeEEEEEECCC
Confidence 56899999999 799888875433 2469999999983
No 200
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=73.10 E-value=3.7 Score=34.86 Aligned_cols=32 Identities=19% Similarity=0.233 Sum_probs=23.5
Q ss_pred eeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEe
Q 025793 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIN 119 (248)
.||+|.|+|.||+.+++.+... +...+|++++
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~-g~~~~V~~~d 33 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRS-GFKGKIYGYD 33 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHT-TCCSEEEEEC
T ss_pred cEEEEEecCHHHHHHHHHHHhc-CCCcEEEEEe
Confidence 4799999999999999987753 2123666553
No 201
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=73.07 E-value=2.4 Score=36.89 Aligned_cols=22 Identities=27% Similarity=0.220 Sum_probs=19.6
Q ss_pred eeEEEeCC-ChhhHHHHHHHhhC
Q 025793 87 LKVAINGF-GRIGRNFLRCWHGR 108 (248)
Q Consensus 87 vkV~INGF-GRIGRlvlR~~~~~ 108 (248)
.+|.|-|- |.||+.+++.++.+
T Consensus 11 ~~IlVtGatG~iG~~l~~~L~~~ 33 (346)
T 3i6i_A 11 GRVLIAGATGFIGQFVATASLDA 33 (346)
T ss_dssp CCEEEECTTSHHHHHHHHHHHHT
T ss_pred CeEEEECCCcHHHHHHHHHHHHC
Confidence 58999997 99999999998875
No 202
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=73.05 E-value=2.9 Score=35.68 Aligned_cols=30 Identities=13% Similarity=0.378 Sum_probs=23.2
Q ss_pred eeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEe
Q 025793 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIN 119 (248)
+||+|.|+|.||+.+++.+... ..++++++
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~---g~~V~~~~ 30 (296)
T 2gf2_A 1 MPVGFIGLGNMGNPMAKNLMKH---GYPLIIYD 30 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHHHT---TCCEEEEC
T ss_pred CeEEEEeccHHHHHHHHHHHHC---CCEEEEEe
Confidence 3799999999999999987753 24665554
No 203
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=72.87 E-value=3.9 Score=33.83 Aligned_cols=32 Identities=16% Similarity=0.240 Sum_probs=23.5
Q ss_pred ceeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEe
Q 025793 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (248)
Q Consensus 85 ~~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIN 119 (248)
..+||+|.|.|.+|..+++.+... ..+++.++
T Consensus 18 ~~~~I~iiG~G~mG~~la~~l~~~---g~~V~~~~ 49 (209)
T 2raf_A 18 QGMEITIFGKGNMGQAIGHNFEIA---GHEVTYYG 49 (209)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHT---TCEEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC---CCEEEEEc
Confidence 346899999999999999887653 24666553
No 204
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=72.15 E-value=3.7 Score=37.52 Aligned_cols=30 Identities=23% Similarity=0.545 Sum_probs=24.6
Q ss_pred eeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEe
Q 025793 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIN 119 (248)
+||+|.|+|.+|+.+++.+... ..+|++.|
T Consensus 23 mkIgiIGlG~mG~~~A~~L~~~---G~~V~v~d 52 (358)
T 4e21_A 23 MQIGMIGLGRMGADMVRRLRKG---GHECVVYD 52 (358)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT---TCEEEEEC
T ss_pred CEEEEECchHHHHHHHHHHHhC---CCEEEEEe
Confidence 6899999999999999988764 36766664
No 205
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=71.94 E-value=3.1 Score=37.42 Aligned_cols=95 Identities=16% Similarity=0.185 Sum_probs=50.6
Q ss_pred eeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeCCCChhhhhhhccccCcCcccCceEEEecCCcEEECCeEEEEEecCC
Q 025793 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRD 166 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND~~~~e~~ayLLkYDStHGkf~g~V~v~e~~~L~inGk~I~v~~~~d 166 (248)
-+|.|+|.|.||.+.++++... ..+|+++-.. .+.+..+.+ +|. +..++..+ +..
T Consensus 196 ~~VlV~GaG~vG~~aiqlak~~---Ga~Vi~~~~~--~~~~~~a~~----lGa---~~vi~~~~-------------~~~ 250 (369)
T 1uuf_A 196 KKVGVVGIGGLGHMGIKLAHAM---GAHVVAFTTS--EAKREAAKA----LGA---DEVVNSRN-------------ADE 250 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT---TCEEEEEESS--GGGHHHHHH----HTC---SEEEETTC-------------HHH
T ss_pred CEEEEECCCHHHHHHHHHHHHC---CCEEEEEeCC--HHHHHHHHH----cCC---cEEecccc-------------HHH
Confidence 3699999999999999887654 2466655322 233333322 231 11111000 000
Q ss_pred CCCCCCCCCcccEEecCcccccCchhhhHHHHcCCCEEEEcCC
Q 025793 167 PLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (248)
Q Consensus 167 P~~i~W~~~GidiVVE~TG~F~~~e~a~~HL~~GAKKVIISAP 209 (248)
.+++. .|+|+||||+|.-...+.+...|+.|.+=|++..+
T Consensus 251 ~~~~~---~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~ 290 (369)
T 1uuf_A 251 MAAHL---KSFDFILNTVAAPHNLDDFTTLLKRDGTMTLVGAP 290 (369)
T ss_dssp HHTTT---TCEEEEEECCSSCCCHHHHHTTEEEEEEEEECCCC
T ss_pred HHHhh---cCCCEEEECCCCHHHHHHHHHHhccCCEEEEeccC
Confidence 01221 38999999999744445555566554433444333
No 206
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=71.93 E-value=4.7 Score=32.56 Aligned_cols=31 Identities=23% Similarity=0.355 Sum_probs=24.1
Q ss_pred eeEEEeC-CChhhHHHHHHHhhCCCCCeEEEEEeC
Q 025793 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (248)
Q Consensus 87 vkV~ING-FGRIGRlvlR~~~~~~~~~l~iVaIND 120 (248)
+||+|.| .|.+|+.+++.+... ..++++++-
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~---g~~V~~~~r 32 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATL---GHEIVVGSR 32 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTT---TCEEEEEES
T ss_pred CeEEEEcCCCHHHHHHHHHHHHC---CCEEEEEeC
Confidence 3799999 999999999987753 357666653
No 207
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=71.84 E-value=3.3 Score=36.49 Aligned_cols=32 Identities=25% Similarity=0.346 Sum_probs=25.6
Q ss_pred ceeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEe
Q 025793 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (248)
Q Consensus 85 ~~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIN 119 (248)
|..|||+.|+|.+|..+++.+... ..++++-|
T Consensus 4 Ms~kIgfIGLG~MG~~mA~~L~~~---G~~V~v~d 35 (297)
T 4gbj_A 4 MSEKIAFLGLGNLGTPIAEILLEA---GYELVVWN 35 (297)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHHT---TCEEEEC-
T ss_pred CCCcEEEEecHHHHHHHHHHHHHC---CCeEEEEe
Confidence 666999999999999999988763 46776655
No 208
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=71.46 E-value=2.5 Score=37.55 Aligned_cols=94 Identities=20% Similarity=0.211 Sum_probs=50.1
Q ss_pred eEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeCCCChhhhhhhc-cccCcCcccCceEEEecCCcEEECCeEEEEEecCC
Q 025793 88 KVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLL-KYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRD 166 (248)
Q Consensus 88 kV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND~~~~e~~ayLL-kYDStHGkf~g~V~v~e~~~L~inGk~I~v~~~~d 166 (248)
+|.|.|.|.||.+.++++... ..+++++-.. .+.+..+. + +|. +..+ +..+. ..
T Consensus 183 ~VlV~GaG~vG~~a~qlak~~---Ga~Vi~~~~~--~~~~~~~~~~----lGa-~~vi--~~~~~-----~~-------- 237 (357)
T 2cf5_A 183 RGGILGLGGVGHMGVKIAKAM---GHHVTVISSS--NKKREEALQD----LGA-DDYV--IGSDQ-----AK-------- 237 (357)
T ss_dssp EEEEECCSHHHHHHHHHHHHH---TCEEEEEESS--TTHHHHHHTT----SCC-SCEE--ETTCH-----HH--------
T ss_pred EEEEECCCHHHHHHHHHHHHC---CCeEEEEeCC--hHHHHHHHHH----cCC-ceee--ccccH-----HH--------
Confidence 699999999999988877543 2466665432 12332222 2 231 1111 11100 00
Q ss_pred CCCCCCCCCcccEEecCcccccCchhhhHHHHcCCCEEEEcCC
Q 025793 167 PLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (248)
Q Consensus 167 P~~i~W~~~GidiVVE~TG~F~~~e~a~~HL~~GAKKVIISAP 209 (248)
..++ . -|+|+|+||+|.-...+.+-..|+.|.+=|++..+
T Consensus 238 ~~~~--~-~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~ 277 (357)
T 2cf5_A 238 MSEL--A-DSLDYVIDTVPVHHALEPYLSLLKLDGKLILMGVI 277 (357)
T ss_dssp HHHS--T-TTEEEEEECCCSCCCSHHHHTTEEEEEEEEECSCC
T ss_pred HHHh--c-CCCCEEEECCCChHHHHHHHHHhccCCEEEEeCCC
Confidence 0011 1 28999999999654455555666655544444444
No 209
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=71.43 E-value=14 Score=28.74 Aligned_cols=82 Identities=17% Similarity=0.081 Sum_probs=52.3
Q ss_pred eeeEEEeCC----ChhhHHHHHHHhhCCCCCeEEEEEeCCCChhhhhhhccccCcCcccCceEEEecCCcEEECCeEEEE
Q 025793 86 KLKVAINGF----GRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKV 161 (248)
Q Consensus 86 ~vkV~INGF----GRIGRlvlR~~~~~~~~~l~iVaIND~~~~e~~ayLLkYDStHGkf~g~V~v~e~~~L~inGk~I~v 161 (248)
|..|+|.|. +++|+.++|.+.+. .++|..||-. ++.++ |.+.
T Consensus 4 p~siAVVGaS~~~~~~g~~v~~~L~~~---g~~V~pVnP~-----------~~~i~------------------G~~~-- 49 (122)
T 3ff4_A 4 MKKTLILGATPETNRYAYLAAERLKSH---GHEFIPVGRK-----------KGEVL------------------GKTI-- 49 (122)
T ss_dssp CCCEEEETCCSCTTSHHHHHHHHHHHH---TCCEEEESSS-----------CSEET------------------TEEC--
T ss_pred CCEEEEEccCCCCCCHHHHHHHHHHHC---CCeEEEECCC-----------CCcCC------------------Ceec--
Confidence 346889887 78999999988764 3589999832 23222 2211
Q ss_pred EecCCCCCCCCCCCcccEEecCcccccCchhhhHHHHcCCCEEEEc
Q 025793 162 VSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIIT 207 (248)
Q Consensus 162 ~~~~dP~~i~W~~~GidiVVE~TG~F~~~e~a~~HL~~GAKKVIIS 207 (248)
-.+.++|| + +|+|+=++..=...+-++.-.+.|+|.|+++
T Consensus 50 --y~sl~dlp--~--vDlavi~~p~~~v~~~v~e~~~~g~k~v~~~ 89 (122)
T 3ff4_A 50 --INERPVIE--G--VDTVTLYINPQNQLSEYNYILSLKPKRVIFN 89 (122)
T ss_dssp --BCSCCCCT--T--CCEEEECSCHHHHGGGHHHHHHHCCSEEEEC
T ss_pred --cCChHHCC--C--CCEEEEEeCHHHHHHHHHHHHhcCCCEEEEC
Confidence 22345565 2 7888766655444455555556799988775
No 210
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=71.39 E-value=3.7 Score=35.05 Aligned_cols=33 Identities=21% Similarity=0.285 Sum_probs=24.3
Q ss_pred eeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEe
Q 025793 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (248)
Q Consensus 86 ~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIN 119 (248)
++||+|.|+|.||..+++.+.... ...+|++.+
T Consensus 6 ~~~I~iIG~G~mG~~~a~~l~~~g-~~~~V~~~d 38 (290)
T 3b1f_A 6 EKTIYIAGLGLIGASLALGIKRDH-PHYKIVGYN 38 (290)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHC-TTSEEEEEC
T ss_pred cceEEEEeeCHHHHHHHHHHHhCC-CCcEEEEEc
Confidence 368999999999999998876531 235665553
No 211
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=71.13 E-value=3.8 Score=34.36 Aligned_cols=31 Identities=26% Similarity=0.487 Sum_probs=24.0
Q ss_pred eeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeCC
Q 025793 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND~ 121 (248)
+||+|.|+|.+|..+++.+... ..+|++ .|.
T Consensus 1 M~I~iIG~G~mG~~la~~l~~~---g~~V~~-~~~ 31 (264)
T 1i36_A 1 LRVGFIGFGEVAQTLASRLRSR---GVEVVT-SLE 31 (264)
T ss_dssp CEEEEESCSHHHHHHHHHHHHT---TCEEEE-CCT
T ss_pred CeEEEEechHHHHHHHHHHHHC---CCeEEE-eCC
Confidence 3799999999999999988753 357665 455
No 212
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=70.39 E-value=3.4 Score=35.80 Aligned_cols=31 Identities=23% Similarity=0.275 Sum_probs=23.8
Q ss_pred eeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEe
Q 025793 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (248)
Q Consensus 86 ~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIN 119 (248)
++||+|.|+|.||+.+++.+... ..+|++++
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~---g~~V~~~~ 60 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKM---GHTVTVWN 60 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHT---TCCEEEEC
T ss_pred CCeEEEEcccHHHHHHHHHHHhC---CCEEEEEe
Confidence 36899999999999999887653 24655554
No 213
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=70.33 E-value=4.4 Score=35.61 Aligned_cols=35 Identities=17% Similarity=0.281 Sum_probs=25.5
Q ss_pred ccceeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeC
Q 025793 83 TVAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (248)
Q Consensus 83 ~~~~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND 120 (248)
.+|++||+|.|.|.+|..+++.+... ..+|..++-
T Consensus 11 ~~~~~kI~iIG~G~mG~ala~~L~~~---G~~V~~~~r 45 (335)
T 1z82_A 11 HHMEMRFFVLGAGSWGTVFAQMLHEN---GEEVILWAR 45 (335)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHT---TCEEEEECS
T ss_pred cccCCcEEEECcCHHHHHHHHHHHhC---CCeEEEEeC
Confidence 45889999999999999999887653 246666653
No 214
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=69.99 E-value=8 Score=36.96 Aligned_cols=32 Identities=41% Similarity=0.694 Sum_probs=28.1
Q ss_pred eeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeCC
Q 025793 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND~ 121 (248)
.+|+|-|||-.|+.+++.+.+. ..++|+|-|.
T Consensus 236 ~~vaVqGfGnVG~~~a~~L~e~---GakvVavsD~ 267 (440)
T 3aog_A 236 ARVAIQGFGNVGNAAARAFHDH---GARVVAVQDH 267 (440)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT---TCEEEEEECS
T ss_pred CEEEEeccCHHHHHHHHHHHHC---CCEEEEEEcC
Confidence 6899999999999999998875 4788999886
No 215
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=69.90 E-value=3.7 Score=36.14 Aligned_cols=94 Identities=16% Similarity=0.104 Sum_probs=50.7
Q ss_pred eEEEeCCChhhHHHHHHHhhCCCCCe-EEEEEeCCCChhhhhhhccccCcCcccCceEEEecCCcEEECCeEEEEEecCC
Q 025793 88 KVAINGFGRIGRNFLRCWHGRKDSPL-DVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRD 166 (248)
Q Consensus 88 kV~INGFGRIGRlvlR~~~~~~~~~l-~iVaIND~~~~e~~ayLLkYDStHGkf~g~V~v~e~~~L~inGk~I~v~~~~d 166 (248)
+|.|.|-|.||.++++++..+ .. +|+++-- +.+.+..+.++ |- +..++ .++
T Consensus 170 ~VlV~GaG~vG~~~~q~a~~~---Ga~~Vi~~~~--~~~~~~~~~~~----Ga---~~~~~----------------~~~ 221 (348)
T 2d8a_A 170 SVLITGAGPLGLLGIAVAKAS---GAYPVIVSEP--SDFRRELAKKV----GA---DYVIN----------------PFE 221 (348)
T ss_dssp CEEEECCSHHHHHHHHHHHHT---TCCSEEEECS--CHHHHHHHHHH----TC---SEEEC----------------TTT
T ss_pred EEEEECCCHHHHHHHHHHHHc---CCCEEEEECC--CHHHHHHHHHh----CC---CEEEC----------------CCC
Confidence 699999999999999987654 24 5665532 23344333322 21 11111 111
Q ss_pred CC---CCC-C-CCCcccEEecCcccccCchhhhHHHHcCCCEEEEcCC
Q 025793 167 PL---QLP-W-AELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (248)
Q Consensus 167 P~---~i~-W-~~~GidiVVE~TG~F~~~e~a~~HL~~GAKKVIISAP 209 (248)
+. .+. + ...|+|+||||+|.-...+.+...|+.|.+=|++..+
T Consensus 222 ~~~~~~v~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~ 269 (348)
T 2d8a_A 222 EDVVKEVMDITDGNGVDVFLEFSGAPKALEQGLQAVTPAGRVSLLGLY 269 (348)
T ss_dssp SCHHHHHHHHTTTSCEEEEEECSCCHHHHHHHHHHEEEEEEEEECCCC
T ss_pred cCHHHHHHHHcCCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEccC
Confidence 10 000 0 1248999999999644445555666655444444444
No 216
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=69.70 E-value=4.7 Score=35.44 Aligned_cols=28 Identities=25% Similarity=0.239 Sum_probs=22.1
Q ss_pred eEEEeCCChhhHHHHHHHhhCCCCCe-EEEEE
Q 025793 88 KVAINGFGRIGRNFLRCWHGRKDSPL-DVVVV 118 (248)
Q Consensus 88 kV~INGFGRIGRlvlR~~~~~~~~~l-~iVaI 118 (248)
+|.|.|-|.||.++++++..+ .. +|+++
T Consensus 167 ~VlV~GaG~vG~~~~q~a~~~---Ga~~Vi~~ 195 (343)
T 2dq4_A 167 SVLITGAGPIGLMAAMVVRAS---GAGPILVS 195 (343)
T ss_dssp CEEEECCSHHHHHHHHHHHHT---TCCSEEEE
T ss_pred EEEEECCCHHHHHHHHHHHHc---CCCEEEEE
Confidence 699999999999999887654 24 56665
No 217
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=69.29 E-value=8.3 Score=35.53 Aligned_cols=40 Identities=18% Similarity=0.071 Sum_probs=27.5
Q ss_pred eeEEEeCC-ChhhHHHHHHHhhCCCCCeEEEEEeCCCChhhhhhhc
Q 025793 87 LKVAINGF-GRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLL 131 (248)
Q Consensus 87 vkV~INGF-GRIGRlvlR~~~~~~~~~l~iVaIND~~~~e~~ayLL 131 (248)
-+|.|.|- |-||.+.+.++... ..++|++-. +.+.+.++.
T Consensus 230 ~~VlV~GasG~vG~~avqlak~~---Ga~vi~~~~--~~~~~~~~~ 270 (456)
T 3krt_A 230 DNVLIWGASGGLGSYATQFALAG---GANPICVVS--SPQKAEICR 270 (456)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHT---TCEEEEEES--SHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHc---CCeEEEEEC--CHHHHHHHH
Confidence 36999998 99999988887653 356666542 345555443
No 218
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=69.23 E-value=2.8 Score=32.24 Aligned_cols=31 Identities=16% Similarity=0.203 Sum_probs=23.0
Q ss_pred eeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeCC
Q 025793 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND~ 121 (248)
.+|+|.|.|.||+.+++.+..+ ..+ |.|-+.
T Consensus 22 ~~v~iiG~G~iG~~~a~~l~~~---g~~-v~v~~r 52 (144)
T 3oj0_A 22 NKILLVGNGMLASEIAPYFSYP---QYK-VTVAGR 52 (144)
T ss_dssp CEEEEECCSHHHHHHGGGCCTT---TCE-EEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHhC---CCE-EEEEcC
Confidence 4899999999999998876542 467 444444
No 219
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=68.89 E-value=4.2 Score=34.03 Aligned_cols=31 Identities=13% Similarity=0.174 Sum_probs=22.5
Q ss_pred eeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEe
Q 025793 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIN 119 (248)
+||+|.|.|.||..+++.+... +. .++.+++
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~-g~-~~v~~~~ 31 (263)
T 1yqg_A 1 MNVYFLGGGNMAAAVAGGLVKQ-GG-YRIYIAN 31 (263)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-CS-CEEEEEC
T ss_pred CEEEEECchHHHHHHHHHHHHC-CC-CeEEEEC
Confidence 4799999999999999887653 11 4555443
No 220
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=68.66 E-value=5.1 Score=36.52 Aligned_cols=32 Identities=28% Similarity=0.331 Sum_probs=25.0
Q ss_pred ceeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEe
Q 025793 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (248)
Q Consensus 85 ~~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIN 119 (248)
...+|+|.|+|+||+.+++.+... ..+|++++
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~~---Ga~V~~~d 198 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANGM---GATVTVLD 198 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT---TCEEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC---CCEEEEEe
Confidence 346899999999999999988754 24766654
No 221
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=68.60 E-value=6.4 Score=34.88 Aligned_cols=91 Identities=23% Similarity=0.242 Sum_probs=51.0
Q ss_pred eeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeC-CCChhhhhhhccccCcCcccCceEEEecCCcEEECCeEEEEEecC
Q 025793 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND-SGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNR 165 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND-~~~~e~~ayLLkYDStHGkf~g~V~v~e~~~L~inGk~I~v~~~~ 165 (248)
-+|.|.|.|.||.++++++..+ ..+|+++-. +..++.+ .+ +|. +..++ .+
T Consensus 181 ~~VlV~GaG~vG~~~~qlak~~---Ga~Vi~~~~~~~~~~~~---~~----lGa---~~v~~----------------~~ 231 (360)
T 1piw_A 181 KKVGIVGLGGIGSMGTLISKAM---GAETYVISRSSRKREDA---MK----MGA---DHYIA----------------TL 231 (360)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH---TCEEEEEESSSTTHHHH---HH----HTC---SEEEE----------------GG
T ss_pred CEEEEECCCHHHHHHHHHHHHC---CCEEEEEcCCHHHHHHH---HH----cCC---CEEEc----------------Cc
Confidence 3799999999999988877543 246666642 2233332 22 231 11111 11
Q ss_pred CC----CCCCCCCCcccEEecCccc--ccCchhhhHHHHcCCCEEEEcCC
Q 025793 166 DP----LQLPWAELGIDIVIEGTGV--FVDGPGAGKHIQAGAKKVIITAP 209 (248)
Q Consensus 166 dP----~~i~W~~~GidiVVE~TG~--F~~~e~a~~HL~~GAKKVIISAP 209 (248)
++ +.+. -|+|+||||+|. -...+.+-..|+.|.+=|++..+
T Consensus 232 ~~~~~~~~~~---~~~D~vid~~g~~~~~~~~~~~~~l~~~G~iv~~g~~ 278 (360)
T 1piw_A 232 EEGDWGEKYF---DTFDLIVVCASSLTDIDFNIMPKAMKVGGRIVSISIP 278 (360)
T ss_dssp GTSCHHHHSC---SCEEEEEECCSCSTTCCTTTGGGGEEEEEEEEECCCC
T ss_pred CchHHHHHhh---cCCCEEEECCCCCcHHHHHHHHHHhcCCCEEEEecCC
Confidence 11 1121 389999999997 44555566667655443444333
No 222
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=68.50 E-value=4.8 Score=37.22 Aligned_cols=31 Identities=19% Similarity=0.105 Sum_probs=24.2
Q ss_pred eeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEe
Q 025793 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (248)
Q Consensus 86 ~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIN 119 (248)
..+|+|.|+|+||+.+++.+... ..+|++++
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~---Ga~V~v~D 202 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSL---GAIVRAFD 202 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT---TCEEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHHC---CCEEEEEc
Confidence 46899999999999999988754 24655554
No 223
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=68.46 E-value=8.3 Score=34.34 Aligned_cols=30 Identities=23% Similarity=0.265 Sum_probs=23.2
Q ss_pred eeEEEeC-CChhhHHHHHHHhhCCCCCeEEEEEe
Q 025793 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVN 119 (248)
Q Consensus 87 vkV~ING-FGRIGRlvlR~~~~~~~~~l~iVaIN 119 (248)
-+|.|.| -|.||.+++.++... ..+|+++-
T Consensus 185 ~~VlV~Ga~G~vG~~~~qla~~~---Ga~Vi~~~ 215 (375)
T 2vn8_A 185 KRVLILGASGGVGTFAIQVMKAW---DAHVTAVC 215 (375)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT---TCEEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhC---CCEEEEEe
Confidence 4799999 899999998887654 24677664
No 224
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=68.23 E-value=5.6 Score=33.33 Aligned_cols=31 Identities=19% Similarity=0.299 Sum_probs=23.9
Q ss_pred eeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeC
Q 025793 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND 120 (248)
+||+|.|.|.+|..+++.+... ..+|..++.
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~---g~~V~~~~r 31 (291)
T 1ks9_A 1 MKITVLGCGALGQLWLTALCKQ---GHEVQGWLR 31 (291)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT---TCEEEEECS
T ss_pred CeEEEECcCHHHHHHHHHHHhC---CCCEEEEEc
Confidence 3799999999999999887653 246666643
No 225
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=68.15 E-value=4.2 Score=38.12 Aligned_cols=32 Identities=13% Similarity=0.027 Sum_probs=24.5
Q ss_pred ceeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEe
Q 025793 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (248)
Q Consensus 85 ~~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIN 119 (248)
.+.||+|.|+|+||+.++|.+... ..+|++++
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~l---Ga~V~v~D 214 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRL---GAKTTGYD 214 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHH---TCEEEEEC
T ss_pred CCCEEEEECchHHHHHHHHHHHHC---CCEEEEEe
Confidence 456999999999999999988754 24655443
No 226
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=67.76 E-value=12 Score=33.66 Aligned_cols=95 Identities=22% Similarity=0.203 Sum_probs=52.3
Q ss_pred eeEEEeCCChhhHHHHHHHhhCCCCCe-EEEEEeCCCChhhhhhhccccCcCcccCceEEEecCCcEEECCeEEEEEecC
Q 025793 87 LKVAINGFGRIGRNFLRCWHGRKDSPL-DVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNR 165 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~~~~~l-~iVaIND~~~~e~~ayLLkYDStHGkf~g~V~v~e~~~L~inGk~I~v~~~~ 165 (248)
-+|.|+|-|-||.+.+.++... .. +|+++- . +.+.+..+.++ | .+..++ .+
T Consensus 215 ~~VlV~GaG~vG~~aiqlak~~---Ga~~Vi~~~-~-~~~~~~~~~~l----G---a~~vi~----------------~~ 266 (404)
T 3ip1_A 215 DNVVILGGGPIGLAAVAILKHA---GASKVILSE-P-SEVRRNLAKEL----G---ADHVID----------------PT 266 (404)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT---TCSEEEEEC-S-CHHHHHHHHHH----T---CSEEEC----------------TT
T ss_pred CEEEEECCCHHHHHHHHHHHHc---CCCEEEEEC-C-CHHHHHHHHHc----C---CCEEEc----------------CC
Confidence 3699999999999988887653 34 666663 2 23444444332 2 111111 11
Q ss_pred CCC------CCCCCCCcccEEecCcccc-cCchhhhHHH----HcCCCEEEEcCCC
Q 025793 166 DPL------QLPWAELGIDIVIEGTGVF-VDGPGAGKHI----QAGAKKVIITAPA 210 (248)
Q Consensus 166 dP~------~i~W~~~GidiVVE~TG~F-~~~e~a~~HL----~~GAKKVIISAPs 210 (248)
++. ++. ...|+|+|+||+|.- ...+.+...| +.|-+=|++..++
T Consensus 267 ~~~~~~~i~~~t-~g~g~D~vid~~g~~~~~~~~~~~~l~~~~~~~G~iv~~G~~~ 321 (404)
T 3ip1_A 267 KENFVEAVLDYT-NGLGAKLFLEATGVPQLVWPQIEEVIWRARGINATVAIVARAD 321 (404)
T ss_dssp TSCHHHHHHHHT-TTCCCSEEEECSSCHHHHHHHHHHHHHHCSCCCCEEEECSCCC
T ss_pred CCCHHHHHHHHh-CCCCCCEEEECCCCcHHHHHHHHHHHHhccCCCcEEEEeCCCC
Confidence 110 011 124899999999975 2334455566 5555545554443
No 227
>1r0k_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; NADPH dependent, fosmidomycin, non- mevalonate pathway, oxidoreductase; 1.91A {Zymomonas mobilis} SCOP: a.69.3.1 c.2.1.3 d.81.1.3 PDB: 1r0l_A*
Probab=67.60 E-value=5 Score=37.75 Aligned_cols=41 Identities=22% Similarity=0.316 Sum_probs=29.9
Q ss_pred eeEEEeCC-ChhhHHHHHHHhhCCCCCeEEEEEeCCCChhhhh
Q 025793 87 LKVAINGF-GRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNAS 128 (248)
Q Consensus 87 vkV~INGF-GRIGRlvlR~~~~~~~~~l~iVaIND~~~~e~~a 128 (248)
+||+|-|+ |.||+.+++.+...+ .+++++++--..+++.+.
T Consensus 5 ~rI~ILGsTGSIG~~~l~vi~~~p-~~~~v~al~ag~ni~~l~ 46 (388)
T 1r0k_A 5 RTVTVLGATGSIGHSTLDLIERNL-DRYQVIALTANRNVKDLA 46 (388)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTG-GGEEEEEEEESSCHHHHH
T ss_pred eEEEEECCCeEeHHHHHHHHHhCc-CcEEEEEEEcCCCHHHHH
Confidence 79999999 999999999876542 348988883222454443
No 228
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=67.37 E-value=3.3 Score=34.72 Aligned_cols=30 Identities=10% Similarity=0.169 Sum_probs=21.2
Q ss_pred eeEEEeC-CChhhHHHHHHHhhCCCCCeEEEEE
Q 025793 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVV 118 (248)
Q Consensus 87 vkV~ING-FGRIGRlvlR~~~~~~~~~l~iVaI 118 (248)
|||.|-| -|.||+.+++.+..+.+ .+|+++
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~~g--~~V~~~ 31 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIANHI--DHFHIG 31 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTC--TTEEEE
T ss_pred CEEEEEcCCchHHHHHHHHHhhCCC--CcEEEE
Confidence 3688888 59999999998765423 344444
No 229
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=67.14 E-value=5.2 Score=34.16 Aligned_cols=36 Identities=22% Similarity=0.350 Sum_probs=25.5
Q ss_pred ceeeEEEeCCChhhHHHHHHHhhCC--CCC-eEEEEEeC
Q 025793 85 AKLKVAINGFGRIGRNFLRCWHGRK--DSP-LDVVVVND 120 (248)
Q Consensus 85 ~~vkV~INGFGRIGRlvlR~~~~~~--~~~-l~iVaIND 120 (248)
+++||+|.|.|.||..+++.+.... ... .+|..++.
T Consensus 7 ~~m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 7 QPIKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc
Confidence 5579999999999999988765420 002 57776654
No 230
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=66.75 E-value=5.9 Score=34.43 Aligned_cols=31 Identities=19% Similarity=0.229 Sum_probs=23.6
Q ss_pred eeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEe
Q 025793 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (248)
Q Consensus 86 ~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIN 119 (248)
++||+|.|.|.||..+++.+... ..+|+.++
T Consensus 4 ~mki~iiG~G~~G~~~a~~L~~~---g~~V~~~~ 34 (359)
T 1bg6_A 4 SKTYAVLGLGNGGHAFAAYLALK---GQSVLAWD 34 (359)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT---TCEEEEEC
T ss_pred cCeEEEECCCHHHHHHHHHHHhC---CCEEEEEe
Confidence 36899999999999998877653 25666553
No 231
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=66.71 E-value=5.4 Score=33.99 Aligned_cols=24 Identities=29% Similarity=0.325 Sum_probs=20.1
Q ss_pred ceeeEEEeC-CChhhHHHHHHHhhC
Q 025793 85 AKLKVAING-FGRIGRNFLRCWHGR 108 (248)
Q Consensus 85 ~~vkV~ING-FGRIGRlvlR~~~~~ 108 (248)
|+.+|.|-| -|.||+.++|.++++
T Consensus 10 m~~~ilVtGatG~iG~~l~~~L~~~ 34 (318)
T 2r6j_A 10 MKSKILIFGGTGYIGNHMVKGSLKL 34 (318)
T ss_dssp CCCCEEEETTTSTTHHHHHHHHHHT
T ss_pred CCCeEEEECCCchHHHHHHHHHHHC
Confidence 444799999 599999999998875
No 232
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=66.42 E-value=2.6 Score=36.76 Aligned_cols=33 Identities=21% Similarity=0.152 Sum_probs=26.4
Q ss_pred eeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeCC
Q 025793 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (248)
Q Consensus 86 ~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND~ 121 (248)
.+||+|.|.|.||..+.+.+... ..+|+.++.+
T Consensus 6 ~mkI~IIG~G~~G~sLA~~L~~~---G~~V~~~~~~ 38 (232)
T 3dfu_A 6 RLRVGIFDDGSSTVNMAEKLDSV---GHYVTVLHAP 38 (232)
T ss_dssp CCEEEEECCSCCCSCHHHHHHHT---TCEEEECSSG
T ss_pred CcEEEEEeeCHHHHHHHHHHHHC---CCEEEEecCH
Confidence 46899999999999999887753 3688777653
No 233
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=66.41 E-value=4.5 Score=35.66 Aligned_cols=96 Identities=21% Similarity=0.146 Sum_probs=53.3
Q ss_pred eeEEEeCCChhhHHHHHHHhhCCCCCe-EEEEEeCCCChhhhhhhccccCcCcccCceEEEecCCcEEECCeEEEEEecC
Q 025793 87 LKVAINGFGRIGRNFLRCWHGRKDSPL-DVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNR 165 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~~~~~l-~iVaIND~~~~e~~ayLLkYDStHGkf~g~V~v~e~~~L~inGk~I~v~~~~ 165 (248)
-+|.|+|-|-||.+.+.++... .. +|+++ +. +.+.+..+.++ | .+..++ .+
T Consensus 168 ~~VlV~GaG~vG~~a~qla~~~---Ga~~Vi~~-~~-~~~~~~~~~~l----G---a~~vi~----------------~~ 219 (352)
T 3fpc_A 168 DTVCVIGIGPVGLMSVAGANHL---GAGRIFAV-GS-RKHCCDIALEY----G---ATDIIN----------------YK 219 (352)
T ss_dssp CCEEEECCSHHHHHHHHHHHTT---TCSSEEEE-CC-CHHHHHHHHHH----T---CCEEEC----------------GG
T ss_pred CEEEEECCCHHHHHHHHHHHHc---CCcEEEEE-CC-CHHHHHHHHHh----C---CceEEc----------------CC
Confidence 3699999999999998887643 24 56665 33 23334433332 2 111111 11
Q ss_pred CCC---CC-CC-CCCcccEEecCcccccCchhhhHHHHcCCCEEEEcCCC
Q 025793 166 DPL---QL-PW-AELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPA 210 (248)
Q Consensus 166 dP~---~i-~W-~~~GidiVVE~TG~F~~~e~a~~HL~~GAKKVIISAPs 210 (248)
++. .+ .+ ...|+|+|+||+|.-...+.+-..|+.|-+=|++..++
T Consensus 220 ~~~~~~~v~~~t~g~g~D~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~ 269 (352)
T 3fpc_A 220 NGDIVEQILKATDGKGVDKVVIAGGDVHTFAQAVKMIKPGSDIGNVNYLG 269 (352)
T ss_dssp GSCHHHHHHHHTTTCCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCC
T ss_pred CcCHHHHHHHHcCCCCCCEEEECCCChHHHHHHHHHHhcCCEEEEecccC
Confidence 110 00 00 12489999999997444555666776665555554443
No 234
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=66.09 E-value=7.6 Score=34.12 Aligned_cols=32 Identities=25% Similarity=0.363 Sum_probs=23.0
Q ss_pred ceeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEe
Q 025793 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (248)
Q Consensus 85 ~~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIN 119 (248)
.++||+|.|.|.+|..++..+... ..+|..+.
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~~---G~~V~l~~ 49 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLARA---GHEVILIA 49 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHHT---TCEEEEEC
T ss_pred cCCcEEEECcCHHHHHHHHHHHHC---CCeEEEEE
Confidence 457999999999999998876643 24666553
No 235
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=66.03 E-value=5.9 Score=36.06 Aligned_cols=32 Identities=16% Similarity=0.146 Sum_probs=24.4
Q ss_pred ceeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEe
Q 025793 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (248)
Q Consensus 85 ~~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIN 119 (248)
...+|+|.|+|+||+.+++.+... ..+|++++
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~---Ga~V~~~d 202 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRL---GAVVMATD 202 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT---TCEEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC---CCEEEEEe
Confidence 356899999999999999988754 24655543
No 236
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=66.01 E-value=5.5 Score=35.20 Aligned_cols=91 Identities=20% Similarity=0.069 Sum_probs=52.2
Q ss_pred ceeeEEEeCC-ChhhHHHHHHHhhCCCCCeEEEEEeCCCChhhhhhhccccCcCcccCceEEEecCCcEEECCeEEEEEe
Q 025793 85 AKLKVAINGF-GRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVS 163 (248)
Q Consensus 85 ~~vkV~INGF-GRIGRlvlR~~~~~~~~~l~iVaIND~~~~e~~ayLLkYDStHGkf~g~V~v~e~~~L~inGk~I~v~~ 163 (248)
.++||+|.|+ |++|+.++|.+.+. .+++|+.-+|... |. + +.|. +++.
T Consensus 6 ~~~rVaViG~sG~~G~~~~~~l~~~---g~~~V~~V~p~~~-------------g~---~----------~~G~--~vy~ 54 (288)
T 2nu8_A 6 KNTKVICQGFTGSQGTFHSEQAIAY---GTKMVGGVTPGKG-------------GT---T----------HLGL--PVFN 54 (288)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHH---TCEEEEEECTTCT-------------TC---E----------ETTE--EEES
T ss_pred CCCEEEEECCCChHHHHHHHHHHHC---CCeEEEEeCCCcc-------------cc---e----------eCCe--eccC
Confidence 3479999999 99999999987753 3677755445210 00 0 1221 2221
Q ss_pred cCCCCCCCCCCCcccEEecCcccccCchhhhHHHHcCCCEEEEcCC
Q 025793 164 NRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (248)
Q Consensus 164 ~~dP~~i~W~~~GidiVVE~TG~F~~~e~a~~HL~~GAKKVIISAP 209 (248)
+.++++- +..+|+||.+|-.-...+-+..-+++|.+-+|+-++
T Consensus 55 --sl~el~~-~~~~D~viI~tP~~~~~~~~~ea~~~Gi~~iVi~t~ 97 (288)
T 2nu8_A 55 --TVREAVA-ATGATASVIYVPAPFCKDSILEAIDAGIKLIITITE 97 (288)
T ss_dssp --SHHHHHH-HHCCCEEEECCCGGGHHHHHHHHHHTTCSEEEECCC
T ss_pred --CHHHHhh-cCCCCEEEEecCHHHHHHHHHHHHHCCCCEEEEECC
Confidence 1222211 125778887777666666666666677776444333
No 237
>3r3j_A Glutamate dehydrogenase; rossman fold, oxidoreductase, apicoplast; 3.10A {Plasmodium falciparum}
Probab=65.80 E-value=10 Score=36.46 Aligned_cols=101 Identities=18% Similarity=0.228 Sum_probs=57.1
Q ss_pred eeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeCC---------CChhhhhhhccccCcCcc-cCceEEEecCCcEEECC
Q 025793 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS---------GGVKNASHLLKYDSLLGT-FKADVKIVDNETISVDG 156 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND~---------~~~e~~ayLLkYDStHGk-f~g~V~v~e~~~L~inG 156 (248)
.+|+|-|||-.|..+++.+.+. .-++|+|-|. .|++.+..+.++...++. ....+. .. -+.
T Consensus 240 ~~VaVQG~GnVG~~aa~~L~e~---GakvVavsD~~G~iyd~~Gld~~~l~~~~~~k~~~~~~v~~~~~--~~----~~a 310 (456)
T 3r3j_A 240 KKCLVSGSGNVAQYLVEKLIEK---GAIVLTMSDSNGYILEPNGFTKEQLNYIMDIKNNQRLRLKEYLK--YS----KTA 310 (456)
T ss_dssp CCEEEECCSHHHHHHHHHHHHH---TCCBCCEECSSCEEECTTCCCHHHHHHHHHHHHTSCCCGGGGGG--TC----SSC
T ss_pred CEEEEECCCHHHHHHHHHHHHC---CCEEEEEECCCCcEECCCCCCHHHHHHHHHHHHhcCcchhhhhh--cC----CCc
Confidence 5899999999999999988764 2466777663 366676655544433321 100000 00 011
Q ss_pred eEEEEEecCCCCCCCCCCCcccEEecC-cccccCchhhhHHHHcCCCEE
Q 025793 157 KLIKVVSNRDPLQLPWAELGIDIVIEG-TGVFVDGPGAGKHIQAGAKKV 204 (248)
Q Consensus 157 k~I~v~~~~dP~~i~W~~~GidiVVE~-TG~F~~~e~a~~HL~~GAKKV 204 (248)
+.+ ++++ .| +..+|+.+=| ++--.+.+.+..-++.+||=|
T Consensus 311 ~~v------~~~~-i~-~~~~DI~iPcA~~~~I~~~na~~l~~~~ak~V 351 (456)
T 3r3j_A 311 KYF------ENQK-PW-NIPCDIAFPCATQNEINENDADLFIQNKCKMI 351 (456)
T ss_dssp EEE------CSCC-GG-GSCCSEEEECSCTTCBCHHHHHHHHHHTCCEE
T ss_pred eEe------CCcc-cc-ccCccEEEeCCCccchhhHHHHHHHhcCCeEE
Confidence 111 1233 36 4578988887 555556666655444566433
No 238
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=65.75 E-value=6.9 Score=30.81 Aligned_cols=85 Identities=24% Similarity=0.284 Sum_probs=50.6
Q ss_pred ceeeEEEeCC----ChhhHHHHHHHhhCCCCCeEEEEEeCCCChhhhhhhccccCcCcccCceEEEecCCcEEECCeEEE
Q 025793 85 AKLKVAINGF----GRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIK 160 (248)
Q Consensus 85 ~~vkV~INGF----GRIGRlvlR~~~~~~~~~l~iVaIND~~~~e~~ayLLkYDStHGkf~g~V~v~e~~~L~inGk~I~ 160 (248)
.+.+|+|.|. |++|+.++|.+.+. .+++..+|-.. +. +.|.+
T Consensus 13 ~p~~IavIGaS~~~g~~G~~~~~~L~~~---G~~V~~vnp~~-----------~~------------------i~G~~-- 58 (138)
T 1y81_A 13 EFRKIALVGASKNPAKYGNIILKDLLSK---GFEVLPVNPNY-----------DE------------------IEGLK-- 58 (138)
T ss_dssp -CCEEEEETCCSCTTSHHHHHHHHHHHT---TCEEEEECTTC-----------SE------------------ETTEE--
T ss_pred CCCeEEEEeecCCCCCHHHHHHHHHHHC---CCEEEEeCCCC-----------Ce------------------ECCee--
Confidence 4578999999 99999999988753 45777776321 11 12211
Q ss_pred EEecCCCCCCCCCCCcccEEecCcccccCchhhhHHHHcCCCEEEEcC
Q 025793 161 VVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITA 208 (248)
Q Consensus 161 v~~~~dP~~i~W~~~GidiVVE~TG~F~~~e~a~~HL~~GAKKVIISA 208 (248)
+ ..++++++- .+|+|+=++-.-.-.+-+..-++.|++.+++.+
T Consensus 59 ~--~~s~~el~~---~vDlvii~vp~~~v~~v~~~~~~~g~~~i~~~~ 101 (138)
T 1y81_A 59 C--YRSVRELPK---DVDVIVFVVPPKVGLQVAKEAVEAGFKKLWFQP 101 (138)
T ss_dssp C--BSSGGGSCT---TCCEEEECSCHHHHHHHHHHHHHTTCCEEEECT
T ss_pred e--cCCHHHhCC---CCCEEEEEeCHHHHHHHHHHHHHcCCCEEEEcC
Confidence 1 223445542 578777676642222333344456888877754
No 239
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=65.63 E-value=5.1 Score=35.14 Aligned_cols=97 Identities=13% Similarity=0.127 Sum_probs=52.7
Q ss_pred eeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeCCCChhhhhhhccccCcCcccCceEEEecCCcEEECCeEEEEEecCC
Q 025793 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRD 166 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND~~~~e~~ayLLkYDStHGkf~g~V~v~e~~~L~inGk~I~v~~~~d 166 (248)
-+|.|+|-|-+|.+.+.++.... ..+|+++-- +.+.+..+.++ | .+..++ +..+
T Consensus 173 ~~vlv~GaG~vG~~a~qla~~~g--~~~Vi~~~~--~~~~~~~~~~l----G---a~~~i~---------------~~~~ 226 (345)
T 3jv7_A 173 STAVVIGVGGLGHVGIQILRAVS--AARVIAVDL--DDDRLALAREV----G---ADAAVK---------------SGAG 226 (345)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHC--CCEEEEEES--CHHHHHHHHHT----T---CSEEEE---------------CSTT
T ss_pred CEEEEECCCHHHHHHHHHHHHcC--CCEEEEEcC--CHHHHHHHHHc----C---CCEEEc---------------CCCc
Confidence 36999999999998888775431 247777632 23444444333 2 111111 0000
Q ss_pred C-CCC-CC-CCCcccEEecCcccccCchhhhHHHHcCCCEEEEcCC
Q 025793 167 P-LQL-PW-AELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (248)
Q Consensus 167 P-~~i-~W-~~~GidiVVE~TG~F~~~e~a~~HL~~GAKKVIISAP 209 (248)
. +.+ .+ ...|+|+|+||+|.-...+.+...|+.|-+=|++..+
T Consensus 227 ~~~~v~~~t~g~g~d~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~~ 272 (345)
T 3jv7_A 227 AADAIRELTGGQGATAVFDFVGAQSTIDTAQQVVAVDGHISVVGIH 272 (345)
T ss_dssp HHHHHHHHHGGGCEEEEEESSCCHHHHHHHHHHEEEEEEEEECSCC
T ss_pred HHHHHHHHhCCCCCeEEEECCCCHHHHHHHHHHHhcCCEEEEECCC
Confidence 0 000 00 1238999999999754445555666665544444444
No 240
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=65.35 E-value=15 Score=31.81 Aligned_cols=30 Identities=20% Similarity=0.262 Sum_probs=22.3
Q ss_pred eEEEeCC-ChhhHHHHHHHhhCCCCCeEEEEEeC
Q 025793 88 KVAINGF-GRIGRNFLRCWHGRKDSPLDVVVVND 120 (248)
Q Consensus 88 kV~INGF-GRIGRlvlR~~~~~~~~~l~iVaIND 120 (248)
+|.|.|- |.||.++++++... + .+++++-.
T Consensus 152 ~VlV~Ga~G~vG~~~~q~a~~~-G--a~vi~~~~ 182 (328)
T 1xa0_A 152 PVLVTGATGGVGSLAVSMLAKR-G--YTVEASTG 182 (328)
T ss_dssp CEEESSTTSHHHHHHHHHHHHT-T--CCEEEEES
T ss_pred eEEEecCCCHHHHHHHHHHHHC-C--CEEEEEEC
Confidence 5999997 99999998887654 2 35665543
No 241
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=65.29 E-value=5.1 Score=36.49 Aligned_cols=41 Identities=29% Similarity=0.331 Sum_probs=28.3
Q ss_pred eeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeCCCChhhhhhhc
Q 025793 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLL 131 (248)
Q Consensus 86 ~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND~~~~e~~ayLL 131 (248)
..||+|.|+|.||..+++.+... ..+|++.+ . +.+.+..+.
T Consensus 8 ~~kIgIIG~G~mG~slA~~L~~~---G~~V~~~d-r-~~~~~~~a~ 48 (341)
T 3ktd_A 8 SRPVCILGLGLIGGSLLRDLHAA---NHSVFGYN-R-SRSGAKSAV 48 (341)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHT---TCCEEEEC-S-CHHHHHHHH
T ss_pred CCEEEEEeecHHHHHHHHHHHHC---CCEEEEEe-C-CHHHHHHHH
Confidence 35899999999999999988754 25666554 3 334444333
No 242
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=65.17 E-value=4.1 Score=34.96 Aligned_cols=30 Identities=23% Similarity=0.257 Sum_probs=23.2
Q ss_pred eeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEe
Q 025793 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIN 119 (248)
+||+|.|+|.+|+.+++.+... ..+|++.+
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~---G~~V~~~d 31 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRA---GFDVTVWN 31 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHH---TCCEEEEC
T ss_pred CeEEEEccCHHHHHHHHHHHHC---CCeEEEEc
Confidence 4899999999999999887753 24555554
No 243
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=68.78 E-value=1.3 Score=36.91 Aligned_cols=32 Identities=22% Similarity=0.123 Sum_probs=23.8
Q ss_pred ceeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEe
Q 025793 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (248)
Q Consensus 85 ~~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIN 119 (248)
+.+||+|.|+|.||+.+++.+... ..++++++
T Consensus 18 ~~~~I~iIG~G~mG~~la~~L~~~---G~~V~~~~ 49 (201)
T 2yjz_A 18 KQGVVCIFGTGDFGKSLGLKMLQC---GYSVVFGS 49 (201)
Confidence 446899999999999999877643 24555554
No 244
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=65.15 E-value=4.9 Score=36.91 Aligned_cols=32 Identities=25% Similarity=0.440 Sum_probs=25.2
Q ss_pred eeEEEeCCChhhHHHHHHHhhCCCCCe-EEEEEeCC
Q 025793 87 LKVAINGFGRIGRNFLRCWHGRKDSPL-DVVVVNDS 121 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~~~~~l-~iVaIND~ 121 (248)
.+|+|.|+|.||+.+++.+... .. +|+++|-.
T Consensus 168 ~~VlIiGaG~iG~~~a~~l~~~---G~~~V~v~~r~ 200 (404)
T 1gpj_A 168 KTVLVVGAGEMGKTVAKSLVDR---GVRAVLVANRT 200 (404)
T ss_dssp CEEEEESCCHHHHHHHHHHHHH---CCSEEEEECSS
T ss_pred CEEEEEChHHHHHHHHHHHHHC---CCCEEEEEeCC
Confidence 4799999999999999987653 35 67777643
No 245
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=64.57 E-value=5.8 Score=34.55 Aligned_cols=32 Identities=22% Similarity=0.495 Sum_probs=24.0
Q ss_pred ceeeEEEeC-CChhhHHHHHHHhhCCCCCeEEEEEe
Q 025793 85 AKLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVN 119 (248)
Q Consensus 85 ~~vkV~ING-FGRIGRlvlR~~~~~~~~~l~iVaIN 119 (248)
|..||+|.| +|.||..+++.+... ..+|++++
T Consensus 20 ~~~~I~iIGg~G~mG~~la~~l~~~---G~~V~~~~ 52 (298)
T 2pv7_A 20 DIHKIVIVGGYGKLGGLFARYLRAS---GYPISILD 52 (298)
T ss_dssp TCCCEEEETTTSHHHHHHHHHHHTT---TCCEEEEC
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHhC---CCeEEEEE
Confidence 445899999 999999999987643 24555553
No 246
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=64.50 E-value=5.8 Score=35.45 Aligned_cols=31 Identities=32% Similarity=0.333 Sum_probs=24.0
Q ss_pred eeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeC
Q 025793 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND 120 (248)
++|+|.|+|.||+.+++.+... .+++++.+.
T Consensus 17 ~~I~IIG~G~mG~alA~~L~~~---G~~V~~~~~ 47 (338)
T 1np3_A 17 KKVAIIGYGSQGHAHACNLKDS---GVDVTVGLR 47 (338)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT---TCCEEEECC
T ss_pred CEEEEECchHHHHHHHHHHHHC---cCEEEEEEC
Confidence 4799999999999999987653 256665544
No 247
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=64.46 E-value=6.2 Score=38.03 Aligned_cols=30 Identities=30% Similarity=0.518 Sum_probs=23.6
Q ss_pred eeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEe
Q 025793 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIN 119 (248)
.+|+|.|+|+||+.+++.+... ..+|+++.
T Consensus 275 ktV~IiG~G~IG~~~A~~lka~---Ga~Viv~d 304 (494)
T 3ce6_A 275 KKVLICGYGDVGKGCAEAMKGQ---GARVSVTE 304 (494)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT---TCEEEEEC
T ss_pred CEEEEEccCHHHHHHHHHHHHC---CCEEEEEe
Confidence 4799999999999999987653 25766554
No 248
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=64.43 E-value=6.4 Score=37.15 Aligned_cols=33 Identities=18% Similarity=0.113 Sum_probs=25.1
Q ss_pred ceeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeCC
Q 025793 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (248)
Q Consensus 85 ~~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND~ 121 (248)
.+.||+|.|+|+||+.++|.+... ..+|+ +-|.
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~l---Ga~V~-v~D~ 221 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRL---GAVVS-ATDV 221 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT---TCEEE-EECS
T ss_pred CCCEEEEECCcHHHHHHHHHHHHC---CCEEE-EEcC
Confidence 457999999999999999988764 24554 4454
No 249
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=64.41 E-value=9.7 Score=33.80 Aligned_cols=95 Identities=16% Similarity=0.182 Sum_probs=52.1
Q ss_pred eeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeCCCChhhhhhhccccCcCcccCceEEEecCCcEEECCeEEEEEecCC
Q 025793 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRD 166 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND~~~~e~~ayLLkYDStHGkf~g~V~v~e~~~L~inGk~I~v~~~~d 166 (248)
-+|.|.|-|-||.+.+.++... ..+++++-. +.+.+..+.++ |. +..+ ...+
T Consensus 191 ~~VlV~G~G~vG~~a~qla~~~---Ga~Vi~~~~--~~~~~~~~~~l----Ga---~~vi----------------~~~~ 242 (363)
T 3uog_A 191 DRVVVQGTGGVALFGLQIAKAT---GAEVIVTSS--SREKLDRAFAL----GA---DHGI----------------NRLE 242 (363)
T ss_dssp CEEEEESSBHHHHHHHHHHHHT---TCEEEEEES--CHHHHHHHHHH----TC---SEEE----------------ETTT
T ss_pred CEEEEECCCHHHHHHHHHHHHc---CCEEEEEec--CchhHHHHHHc----CC---CEEE----------------cCCc
Confidence 3799999999999998887653 347776632 23344433332 21 1111 1000
Q ss_pred CC---CC-CC-CCCcccEEecCcccccCchhhhHHHHcCCCEEEEcCCC
Q 025793 167 PL---QL-PW-AELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPA 210 (248)
Q Consensus 167 P~---~i-~W-~~~GidiVVE~TG~F~~~e~a~~HL~~GAKKVIISAPs 210 (248)
+. .+ .. ...|+|+|+||+| -...+.+-..|+.|-+=|++..+.
T Consensus 243 ~~~~~~v~~~~~g~g~D~vid~~g-~~~~~~~~~~l~~~G~iv~~G~~~ 290 (363)
T 3uog_A 243 EDWVERVYALTGDRGADHILEIAG-GAGLGQSLKAVAPDGRISVIGVLE 290 (363)
T ss_dssp SCHHHHHHHHHTTCCEEEEEEETT-SSCHHHHHHHEEEEEEEEEECCCS
T ss_pred ccHHHHHHHHhCCCCceEEEECCC-hHHHHHHHHHhhcCCEEEEEecCC
Confidence 10 00 00 1248999999999 344455556666555545554443
No 250
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=64.07 E-value=18 Score=32.32 Aligned_cols=97 Identities=24% Similarity=0.187 Sum_probs=51.8
Q ss_pred eeEEEeCCChhhHHHHHHHhhCCCCCe-EEEEEeCCCChhhhhhhccccCcCcccCceEEEecCCcEEECCeEEEEEecC
Q 025793 87 LKVAINGFGRIGRNFLRCWHGRKDSPL-DVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNR 165 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~~~~~l-~iVaIND~~~~e~~ayLLkYDStHGkf~g~V~v~e~~~L~inGk~I~v~~~~ 165 (248)
-+|.|+|-|-+|.+.+.++... .. +|+++ +. +.+.+..+.++ | .+..++ - ...
T Consensus 184 ~~VlV~GaG~vG~~aiqlak~~---Ga~~Vi~~-~~-~~~~~~~a~~l----G---a~~vi~--------~------~~~ 237 (370)
T 4ej6_A 184 STVAILGGGVIGLLTVQLARLA---GATTVILS-TR-QATKRRLAEEV----G---ATATVD--------P------SAG 237 (370)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT---TCSEEEEE-CS-CHHHHHHHHHH----T---CSEEEC--------T------TSS
T ss_pred CEEEEECCCHHHHHHHHHHHHc---CCCEEEEE-CC-CHHHHHHHHHc----C---CCEEEC--------C------CCc
Confidence 3699999999999998887653 24 56655 22 23334333322 2 111111 0 000
Q ss_pred CC----CC-CCCCCCcccEEecCcccccCchhhhHHHHcCCCEEEEcCC
Q 025793 166 DP----LQ-LPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (248)
Q Consensus 166 dP----~~-i~W~~~GidiVVE~TG~F~~~e~a~~HL~~GAKKVIISAP 209 (248)
+. .+ ..+..-|+|+|+||+|.-...+.+...|+.|-+=|++..+
T Consensus 238 ~~~~~i~~~~~~~~gg~Dvvid~~G~~~~~~~~~~~l~~~G~vv~~G~~ 286 (370)
T 4ej6_A 238 DVVEAIAGPVGLVPGGVDVVIECAGVAETVKQSTRLAKAGGTVVILGVL 286 (370)
T ss_dssp CHHHHHHSTTSSSTTCEEEEEECSCCHHHHHHHHHHEEEEEEEEECSCC
T ss_pred CHHHHHHhhhhccCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEecc
Confidence 10 00 1122239999999999543445555666665544444433
No 251
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=63.73 E-value=5.6 Score=34.96 Aligned_cols=31 Identities=16% Similarity=0.288 Sum_probs=23.3
Q ss_pred eeeEEEeCCChhhHHHHHHHhhCCCCCe-EEEEEe
Q 025793 86 KLKVAINGFGRIGRNFLRCWHGRKDSPL-DVVVVN 119 (248)
Q Consensus 86 ~vkV~INGFGRIGRlvlR~~~~~~~~~l-~iVaIN 119 (248)
.+||+|.|+|.+|..+++.+... .. +|++.|
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~---G~~~V~~~d 55 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQA---GAIDMAAYD 55 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHH---SCCEEEEEC
T ss_pred CCEEEEECccHHHHHHHHHHHHC---CCCeEEEEc
Confidence 36899999999999999988753 24 555443
No 252
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=63.70 E-value=12 Score=33.32 Aligned_cols=88 Identities=20% Similarity=0.187 Sum_probs=50.6
Q ss_pred eeeEEEeCC-ChhhHHHHHHHhhCCCCCeEEE-EEeCCCChhhhhhhccccCcCcccCceEEEecCCcEEECCeEEEEEe
Q 025793 86 KLKVAINGF-GRIGRNFLRCWHGRKDSPLDVV-VVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVS 163 (248)
Q Consensus 86 ~vkV~INGF-GRIGRlvlR~~~~~~~~~l~iV-aIND~~~~e~~ayLLkYDStHGkf~g~V~v~e~~~L~inGk~I~v~~ 163 (248)
+.+|+|.|. ||.|+.++|.+.+. .+++| .|| |... ++. +.| ++++.
T Consensus 13 ~~~vvV~Gasg~~G~~~~~~l~~~---g~~~v~~Vn-P~~~--------g~~------------------i~G--~~vy~ 60 (297)
T 2yv2_A 13 ETRVLVQGITGREGSFHAKAMLEY---GTKVVAGVT-PGKG--------GSE------------------VHG--VPVYD 60 (297)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHH---TCEEEEEEC-TTCT--------TCE------------------ETT--EEEES
T ss_pred CCEEEEECCCCCHHHHHHHHHHhC---CCcEEEEeC-CCCC--------Cce------------------ECC--EeeeC
Confidence 468999998 99999999987763 35555 555 4210 010 122 12221
Q ss_pred cCCCCCCCCCCCc-ccEEecCcccccCchhhhHHHHcCCCEEEEcC
Q 025793 164 NRDPLQLPWAELG-IDIVIEGTGVFVDGPGAGKHIQAGAKKVIITA 208 (248)
Q Consensus 164 ~~dP~~i~W~~~G-idiVVE~TG~F~~~e~a~~HL~~GAKKVIISA 208 (248)
+.++++- +.+ +|++|.+|---...+-+..-++.|++-+|+-+
T Consensus 61 --sl~el~~-~~~~~DvaIi~vp~~~~~~~v~ea~~~Gi~~vVi~t 103 (297)
T 2yv2_A 61 --SVKEALA-EHPEINTSIVFVPAPFAPDAVYEAVDAGIRLVVVIT 103 (297)
T ss_dssp --SHHHHHH-HCTTCCEEEECCCGGGHHHHHHHHHHTTCSEEEECC
T ss_pred --CHHHHhh-cCCCCCEEEEecCHHHHHHHHHHHHHCCCCEEEEEC
Confidence 1222221 124 78888877766555666666667888665533
No 253
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=63.41 E-value=5.1 Score=33.12 Aligned_cols=29 Identities=24% Similarity=0.334 Sum_probs=22.1
Q ss_pred eeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEE
Q 025793 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVV 118 (248)
Q Consensus 86 ~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaI 118 (248)
..+|.|-|+|++|+.+++.+.+. .. +++|
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~~---g~-v~vi 37 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRGS---EV-FVLA 37 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTTS---EE-EEEE
T ss_pred CCEEEEECCChHHHHHHHHHHhC---Ce-EEEE
Confidence 45799999999999999987643 35 5555
No 254
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=63.31 E-value=5.1 Score=33.78 Aligned_cols=29 Identities=28% Similarity=0.328 Sum_probs=22.4
Q ss_pred eeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEe
Q 025793 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIN 119 (248)
+||+|.|+|.+|+.+++.+.. + .++++++
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~--g--~~V~~~~ 30 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLAR--R--FPTLVWN 30 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHT--T--SCEEEEC
T ss_pred CeEEEEcccHHHHHHHHHHhC--C--CeEEEEe
Confidence 479999999999999988764 2 4555553
No 255
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=63.27 E-value=7.4 Score=35.89 Aligned_cols=31 Identities=23% Similarity=0.475 Sum_probs=25.5
Q ss_pred eeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeCC
Q 025793 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND~ 121 (248)
.+|+|-|||.+|+.+++.+.+. ..+|+ +.|.
T Consensus 174 ktV~V~G~G~VG~~~A~~L~~~---GakVv-v~D~ 204 (364)
T 1leh_A 174 LAVSVQGLGNVAKALCKKLNTE---GAKLV-VTDV 204 (364)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT---TCEEE-EECS
T ss_pred CEEEEECchHHHHHHHHHHHHC---CCEEE-EEcC
Confidence 4799999999999999998764 35777 6666
No 256
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=62.75 E-value=10 Score=33.85 Aligned_cols=96 Identities=16% Similarity=0.137 Sum_probs=53.5
Q ss_pred eeEEEeC-CChhhHHHHHHHhhCCCCCeEEEEEeCCCChhhhhhhccccCcCcccCceEEEecCCcEEECCeEEEEEecC
Q 025793 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNR 165 (248)
Q Consensus 87 vkV~ING-FGRIGRlvlR~~~~~~~~~l~iVaIND~~~~e~~ayLLkYDStHGkf~g~V~v~e~~~L~inGk~I~v~~~~ 165 (248)
-+|.|+| -|-||.+.++++.... ..+|+++-. +.+.+..+.++ | .+..++..+. + ..
T Consensus 173 ~~VlV~Ga~G~vG~~a~qlak~~~--g~~Vi~~~~--~~~~~~~~~~l----G---ad~vi~~~~~---------~--~~ 230 (363)
T 4dvj_A 173 PAILIVGGAGGVGSIAVQIARQRT--DLTVIATAS--RPETQEWVKSL----G---AHHVIDHSKP---------L--AA 230 (363)
T ss_dssp EEEEEESTTSHHHHHHHHHHHHHC--CSEEEEECS--SHHHHHHHHHT----T---CSEEECTTSC---------H--HH
T ss_pred CEEEEECCCCHHHHHHHHHHHHhc--CCEEEEEeC--CHHHHHHHHHc----C---CCEEEeCCCC---------H--HH
Confidence 4799999 9999998888775421 247776632 33444444332 3 2212211000 0 00
Q ss_pred CCCCCCCCCCcccEEecCcccccCchhhhHHHHcCCCEEEE
Q 025793 166 DPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVII 206 (248)
Q Consensus 166 dP~~i~W~~~GidiVVE~TG~F~~~e~a~~HL~~GAKKVII 206 (248)
...++ ..-|+|+|+||+|.-...+.+...|+.|.+=|++
T Consensus 231 ~v~~~--~~~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 231 EVAAL--GLGAPAFVFSTTHTDKHAAEIADLIAPQGRFCLI 269 (363)
T ss_dssp HHHTT--CSCCEEEEEECSCHHHHHHHHHHHSCTTCEEEEC
T ss_pred HHHHh--cCCCceEEEECCCchhhHHHHHHHhcCCCEEEEE
Confidence 01112 3358999999999644445556677766655555
No 257
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=62.60 E-value=13 Score=27.95 Aligned_cols=34 Identities=24% Similarity=0.277 Sum_probs=28.2
Q ss_pred eeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeCC
Q 025793 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (248)
Q Consensus 86 ~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND~ 121 (248)
+.+|.|.|.|..|+.+++.+... +.++++++=|.
T Consensus 4 ~~~vlIiGaG~~g~~l~~~l~~~--~g~~vvg~~d~ 37 (141)
T 3nkl_A 4 KKKVLIYGAGSAGLQLANMLRQG--KEFHPIAFIDD 37 (141)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHS--SSEEEEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCcEEEEEEEC
Confidence 35899999999999999987653 36899988765
No 258
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=62.60 E-value=7.7 Score=34.36 Aligned_cols=32 Identities=22% Similarity=0.248 Sum_probs=24.2
Q ss_pred cee-eEEEeCCChhhHHHHHHHhhCCCCCeEEEEEe
Q 025793 85 AKL-KVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (248)
Q Consensus 85 ~~v-kV~INGFGRIGRlvlR~~~~~~~~~l~iVaIN 119 (248)
|++ ||+|.|.|.+|..+++.+... ..+|.+++
T Consensus 13 m~M~kI~iIG~G~mG~~la~~L~~~---G~~V~~~~ 45 (366)
T 1evy_A 13 LYLNKAVVFGSGAFGTALAMVLSKK---CREVCVWH 45 (366)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHTTT---EEEEEEEC
T ss_pred hccCeEEEECCCHHHHHHHHHHHhC---CCEEEEEE
Confidence 445 999999999999998877542 35666664
No 259
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=62.27 E-value=29 Score=30.55 Aligned_cols=77 Identities=18% Similarity=0.073 Sum_probs=44.8
Q ss_pred eeEEEeCCChhhHH-HHHHHhhCCCCCeEEEEEeCCCC-hhhhhhhccccCcCcccCceEEEecCCcEEECCeEEEEEec
Q 025793 87 LKVAINGFGRIGRN-FLRCWHGRKDSPLDVVVVNDSGG-VKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (248)
Q Consensus 87 vkV~INGFGRIGRl-vlR~~~~~~~~~l~iVaIND~~~-~e~~ayLLkYDStHGkf~g~V~v~e~~~L~inGk~I~v~~~ 164 (248)
.||.+.|.|.+|.. ++|.+..+ ..+| .+.|... ......|-+ . | |.+...
T Consensus 5 ~~i~~iGiGg~Gms~~A~~L~~~---G~~V-~~~D~~~~~~~~~~L~~----------------~------g--i~v~~g 56 (326)
T 3eag_A 5 KHIHIIGIGGTFMGGLAAIAKEA---GFEV-SGCDAKMYPPMSTQLEA----------------L------G--IDVYEG 56 (326)
T ss_dssp CEEEEESCCSHHHHHHHHHHHHT---TCEE-EEEESSCCTTHHHHHHH----------------T------T--CEEEES
T ss_pred cEEEEEEECHHHHHHHHHHHHhC---CCEE-EEEcCCCCcHHHHHHHh----------------C------C--CEEECC
Confidence 58999999999995 88888765 2454 4555421 111111211 0 1 223334
Q ss_pred CCCCCCCCCCCcccEEecCcccccCchhh
Q 025793 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGA 193 (248)
Q Consensus 165 ~dP~~i~W~~~GidiVVE~TG~F~~~e~a 193 (248)
.+|+++.+ .++|+||=+.|+-.+.+.+
T Consensus 57 ~~~~~l~~--~~~d~vV~Spgi~~~~p~~ 83 (326)
T 3eag_A 57 FDAAQLDE--FKADVYVIGNVAKRGMDVV 83 (326)
T ss_dssp CCGGGGGS--CCCSEEEECTTCCTTCHHH
T ss_pred CCHHHcCC--CCCCEEEECCCcCCCCHHH
Confidence 45665531 2578888898987666443
No 260
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=62.15 E-value=11 Score=33.16 Aligned_cols=30 Identities=33% Similarity=0.407 Sum_probs=23.3
Q ss_pred eeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEe
Q 025793 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIN 119 (248)
-+|.|.|-|.||.++++++... ..+++++-
T Consensus 166 ~~VlV~GaG~vG~~~~~~a~~~---Ga~Vi~~~ 195 (339)
T 1rjw_A 166 EWVAIYGIGGLGHVAVQYAKAM---GLNVVAVD 195 (339)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT---TCEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHc---CCEEEEEe
Confidence 3799999999999999987654 24776663
No 261
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=62.04 E-value=6.4 Score=34.15 Aligned_cols=22 Identities=18% Similarity=0.261 Sum_probs=19.7
Q ss_pred eeEEEeCCChhhHHHHHHHhhC
Q 025793 87 LKVAINGFGRIGRNFLRCWHGR 108 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~ 108 (248)
+||+|.|.|.+|..+++.+...
T Consensus 4 ~~I~iIG~G~mG~aia~~l~~~ 25 (280)
T 3tri_A 4 SNITFIGGGNMARNIVVGLIAN 25 (280)
T ss_dssp SCEEEESCSHHHHHHHHHHHHT
T ss_pred CEEEEEcccHHHHHHHHHHHHC
Confidence 6899999999999999988764
No 262
>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6
Probab=62.03 E-value=2.6 Score=36.26 Aligned_cols=32 Identities=22% Similarity=0.431 Sum_probs=20.7
Q ss_pred eeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeCC
Q 025793 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (248)
Q Consensus 86 ~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND~ 121 (248)
++||+|.|.|++|+.+++.+.. . .+++.+-|.
T Consensus 2 ~m~I~iIG~G~mG~~la~~l~~---~-~~v~~v~~~ 33 (276)
T 2i76_A 2 SLVLNFVGTGTLTRFFLECLKD---R-YEIGYILSR 33 (276)
T ss_dssp --CCEEESCCHHHHHHHHTTC--------CCCEECS
T ss_pred CceEEEEeCCHHHHHHHHHHHH---c-CcEEEEEeC
Confidence 4689999999999999887653 2 565444444
No 263
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=61.21 E-value=8.4 Score=29.17 Aligned_cols=31 Identities=19% Similarity=0.201 Sum_probs=23.1
Q ss_pred ceeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEE
Q 025793 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVV 118 (248)
Q Consensus 85 ~~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaI 118 (248)
|+++|+|.|-|.-|-.++..+..+ .++++++
T Consensus 1 Mt~dV~IIGaGpaGL~aA~~La~~---G~~V~v~ 31 (336)
T 3kkj_A 1 MTVPIAIIGTGIAGLSAAQALTAA---GHQVHLF 31 (336)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHT---TCCEEEE
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC---CCCEEEE
Confidence 567899999999998888776543 3666655
No 264
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=61.18 E-value=8.8 Score=34.35 Aligned_cols=31 Identities=19% Similarity=0.283 Sum_probs=26.4
Q ss_pred eeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeC
Q 025793 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND 120 (248)
.+|+|-|.|.+||.++|++... .+++++++.
T Consensus 15 k~IlIlG~G~~g~~la~aa~~~---G~~vi~~d~ 45 (389)
T 3q2o_A 15 KTIGIIGGGQLGRMMALAAKEM---GYKIAVLDP 45 (389)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT---TCEEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHHc---CCEEEEEeC
Confidence 4899999999999999998754 588888864
No 265
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=60.52 E-value=8.2 Score=33.58 Aligned_cols=94 Identities=12% Similarity=0.024 Sum_probs=51.5
Q ss_pred eeEEEeC-CChhhHHHHHHHhhCCCCCeEEEEEeCCCChhhhhhhccccCcCcccCceEEEecCCcEEECCeEEEEEecC
Q 025793 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNR 165 (248)
Q Consensus 87 vkV~ING-FGRIGRlvlR~~~~~~~~~l~iVaIND~~~~e~~ayLLkYDStHGkf~g~V~v~e~~~L~inGk~I~v~~~~ 165 (248)
-+|.|.| -|-||..+++++... ..+++++-. +.+.+.++.++ | .+..++ ..
T Consensus 142 ~~VlV~Ga~g~iG~~~~~~a~~~---Ga~Vi~~~~--~~~~~~~~~~~----G---a~~~~~----------------~~ 193 (325)
T 3jyn_A 142 EIILFHAAAGGVGSLACQWAKAL---GAKLIGTVS--SPEKAAHAKAL----G---AWETID----------------YS 193 (325)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHH---TCEEEEEES--SHHHHHHHHHH----T---CSEEEE----------------TT
T ss_pred CEEEEEcCCcHHHHHHHHHHHHC---CCEEEEEeC--CHHHHHHHHHc----C---CCEEEe----------------CC
Confidence 4799999 899999998887653 246666532 23444444332 2 111111 11
Q ss_pred CCC---CC-CC-CCCcccEEecCcccccCchhhhHHHHcCCCEEEEcCC
Q 025793 166 DPL---QL-PW-AELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (248)
Q Consensus 166 dP~---~i-~W-~~~GidiVVE~TG~F~~~e~a~~HL~~GAKKVIISAP 209 (248)
++. .+ .+ ...|+|+|+||+|. ...+.+-..|+.|.+=|++..+
T Consensus 194 ~~~~~~~~~~~~~~~g~Dvvid~~g~-~~~~~~~~~l~~~G~iv~~g~~ 241 (325)
T 3jyn_A 194 HEDVAKRVLELTDGKKCPVVYDGVGQ-DTWLTSLDSVAPRGLVVSFGNA 241 (325)
T ss_dssp TSCHHHHHHHHTTTCCEEEEEESSCG-GGHHHHHTTEEEEEEEEECCCT
T ss_pred CccHHHHHHHHhCCCCceEEEECCCh-HHHHHHHHHhcCCCEEEEEecC
Confidence 110 00 00 12489999999997 3444555566555544555444
No 266
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=60.45 E-value=7.6 Score=33.03 Aligned_cols=30 Identities=27% Similarity=0.267 Sum_probs=23.6
Q ss_pred eEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeC
Q 025793 88 KVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (248)
Q Consensus 88 kV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND 120 (248)
+|+|.|.|.+||.+++.+.... .++.+.|-
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~g---~~v~v~~r 147 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREAG---LEVWVWNR 147 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHTT---CCEEEECS
T ss_pred eEEEECCcHHHHHHHHHHHHCC---CEEEEEEC
Confidence 7999999999999999887642 36655553
No 267
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=60.34 E-value=8.3 Score=36.18 Aligned_cols=32 Identities=22% Similarity=0.430 Sum_probs=24.4
Q ss_pred ceeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEe
Q 025793 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (248)
Q Consensus 85 ~~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIN 119 (248)
|++||+|.|.|.+|..++.++... ..+|+.++
T Consensus 1 M~mkI~VIG~G~vG~~lA~~La~~---G~~V~~~D 32 (450)
T 3gg2_A 1 MSLDIAVVGIGYVGLVSATCFAEL---GANVRCID 32 (450)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHT---TCEEEEEC
T ss_pred CCCEEEEECcCHHHHHHHHHHHhc---CCEEEEEE
Confidence 346999999999999999887653 35766553
No 268
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=59.25 E-value=12 Score=33.14 Aligned_cols=29 Identities=14% Similarity=0.217 Sum_probs=22.3
Q ss_pred eeEEEeCCChhhHHHHHHHhhCCCCCe-EEEEE
Q 025793 87 LKVAINGFGRIGRNFLRCWHGRKDSPL-DVVVV 118 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~~~~~l-~iVaI 118 (248)
-+|.|.|-|-||.+.++++... .. +|+++
T Consensus 197 ~~VlV~GaG~vG~~aiqlak~~---Ga~~Vi~~ 226 (376)
T 1e3i_A 197 STCAVFGLGCVGLSAIIGCKIA---GASRIIAI 226 (376)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT---TCSEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHc---CCCeEEEE
Confidence 3799999999999998887653 24 56665
No 269
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=59.05 E-value=10 Score=34.27 Aligned_cols=31 Identities=26% Similarity=0.324 Sum_probs=24.5
Q ss_pred eeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEe
Q 025793 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (248)
Q Consensus 86 ~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIN 119 (248)
..+|+|.|.|+||+.+++.+... ..+|++++
T Consensus 166 ~~~V~ViGaG~iG~~~a~~l~~~---Ga~V~~~d 196 (369)
T 2eez_A 166 PASVVILGGGTVGTNAAKIALGM---GAQVTILD 196 (369)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT---TCEEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhC---CCEEEEEE
Confidence 46899999999999999988754 24666654
No 270
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=59.01 E-value=5.4 Score=33.28 Aligned_cols=21 Identities=19% Similarity=0.471 Sum_probs=18.7
Q ss_pred eeEEEeCCChhhHHHHHHHhh
Q 025793 87 LKVAINGFGRIGRNFLRCWHG 107 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~ 107 (248)
+||+|.|.|.||..+++.+..
T Consensus 5 m~i~iiG~G~mG~~~a~~l~~ 25 (262)
T 2rcy_A 5 IKLGFMGLGQMGSALAHGIAN 25 (262)
T ss_dssp SCEEEECCSHHHHHHHHHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHH
Confidence 589999999999999988764
No 271
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=59.00 E-value=14 Score=33.76 Aligned_cols=40 Identities=18% Similarity=0.078 Sum_probs=27.0
Q ss_pred eeEEEeCC-ChhhHHHHHHHhhCCCCCeEEEEEeCCCChhhhhhhc
Q 025793 87 LKVAINGF-GRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLL 131 (248)
Q Consensus 87 vkV~INGF-GRIGRlvlR~~~~~~~~~l~iVaIND~~~~e~~ayLL 131 (248)
-+|.|.|- |-||.+.++++... ..++|++-. +.+.+..+.
T Consensus 222 ~~VlV~GasG~iG~~a~qla~~~---Ga~vi~~~~--~~~~~~~~~ 262 (447)
T 4a0s_A 222 DIVLIWGASGGLGSYAIQFVKNG---GGIPVAVVS--SAQKEAAVR 262 (447)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHT---TCEEEEEES--SHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHc---CCEEEEEeC--CHHHHHHHH
Confidence 47999998 99999998887654 246665532 344554443
No 272
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=58.70 E-value=7.8 Score=36.50 Aligned_cols=30 Identities=20% Similarity=0.367 Sum_probs=23.7
Q ss_pred eeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEe
Q 025793 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIN 119 (248)
+||+|.|+|.+|..+++.+... ..+|++.|
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~---G~~V~v~d 32 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDH---GFVVCAFN 32 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT---TCCEEEEC
T ss_pred CeEEEEChHHHHHHHHHHHHHC---CCeEEEEe
Confidence 5899999999999999987754 34666554
No 273
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=58.68 E-value=8.9 Score=34.17 Aligned_cols=29 Identities=21% Similarity=0.267 Sum_probs=21.9
Q ss_pred eeEEEeCCChhhHHHHHHHhhCCCCCe-EEEEE
Q 025793 87 LKVAINGFGRIGRNFLRCWHGRKDSPL-DVVVV 118 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~~~~~l-~iVaI 118 (248)
-+|.|.|-|-||.+.+.++... .. +|+++
T Consensus 195 ~~VlV~GaG~vG~~a~q~a~~~---Ga~~Vi~~ 224 (378)
T 3uko_A 195 SNVAIFGLGTVGLAVAEGAKTA---GASRIIGI 224 (378)
T ss_dssp CCEEEECCSHHHHHHHHHHHHH---TCSCEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHc---CCCeEEEE
Confidence 3699999999999988877543 23 56666
No 274
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=58.67 E-value=10 Score=33.61 Aligned_cols=29 Identities=17% Similarity=0.245 Sum_probs=21.7
Q ss_pred eeEEEeCCChhhHHHHHHHhhCCCCCe-EEEEE
Q 025793 87 LKVAINGFGRIGRNFLRCWHGRKDSPL-DVVVV 118 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~~~~~l-~iVaI 118 (248)
-+|.|.|.|-||.+.+.++... .. +|+++
T Consensus 193 ~~VlV~GaG~vG~~aiqlak~~---Ga~~Vi~~ 222 (373)
T 1p0f_A 193 STCAVFGLGGVGFSAIVGCKAA---GASRIIGV 222 (373)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH---TCSEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHc---CCCeEEEE
Confidence 3799999999999888877543 23 56665
No 275
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=58.64 E-value=6.2 Score=34.41 Aligned_cols=94 Identities=14% Similarity=0.076 Sum_probs=52.7
Q ss_pred eeEEEeC-CChhhHHHHHHHhhCCCCCeEEEEEeCCCChhhhhhhccccCcCcccCceEEEecCCcEEECCeEEEEEecC
Q 025793 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNR 165 (248)
Q Consensus 87 vkV~ING-FGRIGRlvlR~~~~~~~~~l~iVaIND~~~~e~~ayLLkYDStHGkf~g~V~v~e~~~L~inGk~I~v~~~~ 165 (248)
-+|.|.| -|-||..+++++..+ ..+++++-. +.+.+..+.++ | .+..++ .+
T Consensus 150 ~~vlV~Ga~g~iG~~~~~~a~~~---Ga~Vi~~~~--~~~~~~~~~~~----g---a~~~~~----------------~~ 201 (334)
T 3qwb_A 150 DYVLLFAAAGGVGLILNQLLKMK---GAHTIAVAS--TDEKLKIAKEY----G---AEYLIN----------------AS 201 (334)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHT---TCEEEEEES--SHHHHHHHHHT----T---CSEEEE----------------TT
T ss_pred CEEEEECCCCHHHHHHHHHHHHC---CCEEEEEeC--CHHHHHHHHHc----C---CcEEEe----------------CC
Confidence 4799999 899999999887654 246666643 23444433332 2 111111 11
Q ss_pred CCC---CC-CC-CCCcccEEecCcccccCchhhhHHHHcCCCEEEEcCC
Q 025793 166 DPL---QL-PW-AELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (248)
Q Consensus 166 dP~---~i-~W-~~~GidiVVE~TG~F~~~e~a~~HL~~GAKKVIISAP 209 (248)
++. .+ .+ ...|+|+|+||+|. ...+.+-..|+.|-+=|++..+
T Consensus 202 ~~~~~~~~~~~~~~~g~D~vid~~g~-~~~~~~~~~l~~~G~iv~~G~~ 249 (334)
T 3qwb_A 202 KEDILRQVLKFTNGKGVDASFDSVGK-DTFEISLAALKRKGVFVSFGNA 249 (334)
T ss_dssp TSCHHHHHHHHTTTSCEEEEEECCGG-GGHHHHHHHEEEEEEEEECCCT
T ss_pred CchHHHHHHHHhCCCCceEEEECCCh-HHHHHHHHHhccCCEEEEEcCC
Confidence 111 00 00 12489999999997 4445555666665554555444
No 276
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=58.63 E-value=7.6 Score=34.20 Aligned_cols=35 Identities=9% Similarity=0.211 Sum_probs=24.6
Q ss_pred eeeEEEeCCChhhHHHHHHHhhCCC-CCeEEEEEeC
Q 025793 86 KLKVAINGFGRIGRNFLRCWHGRKD-SPLDVVVVND 120 (248)
Q Consensus 86 ~vkV~INGFGRIGRlvlR~~~~~~~-~~l~iVaIND 120 (248)
++||+|.|.|.+|..+++.+..... ...+|++.|-
T Consensus 22 ~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r 57 (322)
T 2izz_A 22 SMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSP 57 (322)
T ss_dssp CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECC
Confidence 3689999999999999998775320 1146665543
No 277
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=58.30 E-value=19 Score=31.26 Aligned_cols=98 Identities=17% Similarity=0.093 Sum_probs=51.5
Q ss_pred eeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeCCCChhhhhhhccccCcCcccCceEEEecCCcEEECCeEEEEEecCC
Q 025793 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRD 166 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND~~~~e~~ayLLkYDStHGkf~g~V~v~e~~~L~inGk~I~v~~~~d 166 (248)
-+|.|.|-|-+|.+.+.++.... .+.+.+-+. +.+.+..+.++ | .+..++-. +.+
T Consensus 162 ~~VlV~GaG~vG~~aiq~ak~~G---~~~vi~~~~-~~~k~~~a~~l----G---a~~~i~~~--------------~~~ 216 (346)
T 4a2c_A 162 KNVIIIGAGTIGLLAIQCAVALG---AKSVTAIDI-SSEKLALAKSF----G---AMQTFNSS--------------EMS 216 (346)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTT---CSEEEEEES-CHHHHHHHHHT----T---CSEEEETT--------------TSC
T ss_pred CEEEEECCCCcchHHHHHHHHcC---CcEEEEEec-hHHHHHHHHHc----C---CeEEEeCC--------------CCC
Confidence 36999999999998888776532 233333333 23444433333 2 11111100 001
Q ss_pred CC----CCCCCCCcccEEecCcccccCchhhhHHHHcCCCEEEEcCCC
Q 025793 167 PL----QLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPA 210 (248)
Q Consensus 167 P~----~i~W~~~GidiVVE~TG~F~~~e~a~~HL~~GAKKVIISAPs 210 (248)
.. .+. ...|+|+|+|++|.-...+.+-..++.|-.-|++..+.
T Consensus 217 ~~~~~~~~~-~~~g~d~v~d~~G~~~~~~~~~~~l~~~G~~v~~g~~~ 263 (346)
T 4a2c_A 217 APQMQSVLR-ELRFNQLILETAGVPQTVELAVEIAGPHAQLALVGTLH 263 (346)
T ss_dssp HHHHHHHHG-GGCSSEEEEECSCSHHHHHHHHHHCCTTCEEEECCCCS
T ss_pred HHHHHHhhc-ccCCcccccccccccchhhhhhheecCCeEEEEEeccC
Confidence 00 011 12478999999996544455555555565555555554
No 278
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=57.75 E-value=23 Score=31.17 Aligned_cols=97 Identities=10% Similarity=0.084 Sum_probs=50.4
Q ss_pred eeEEEeCCChhhHHH-HHHH-hhCCCCCeE-EEEEeCCCC-hhhhhhhccccCcCcccCceEEEecCCcEEECCeEEEEE
Q 025793 87 LKVAINGFGRIGRNF-LRCW-HGRKDSPLD-VVVVNDSGG-VKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVV 162 (248)
Q Consensus 87 vkV~INGFGRIGRlv-lR~~-~~~~~~~l~-iVaIND~~~-~e~~ayLLkYDStHGkf~g~V~v~e~~~L~inGk~I~v~ 162 (248)
-+|.|+|-|-||.+. +.++ ... ..+ |+++-.... ...+.++.+ +|- +.. +-.
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~~---Ga~~Vi~~~~~~~~~~~~~~~~~----lGa---~~v-~~~------------- 229 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDDK---GYENLYCLGRRDRPDPTIDIIEE----LDA---TYV-DSR------------- 229 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCTT---CCCEEEEEECCCSSCHHHHHHHH----TTC---EEE-ETT-------------
T ss_pred CEEEEECCCHHHHHHHHHHHHHHc---CCcEEEEEeCCcccHHHHHHHHH----cCC---ccc-CCC-------------
Confidence 479999999999998 8877 533 244 666643322 002333322 231 111 100
Q ss_pred ecCCCCCC-CCCCCcccEEecCcccccCchhhhHHHHcCCCEEEEcCC
Q 025793 163 SNRDPLQL-PWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (248)
Q Consensus 163 ~~~dP~~i-~W~~~GidiVVE~TG~F~~~e~a~~HL~~GAKKVIISAP 209 (248)
+.+..++ .+.. |+|+||||+|.-...+.+-..|+.|-+=|++..+
T Consensus 230 -~~~~~~i~~~~g-g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~ 275 (357)
T 2b5w_A 230 -QTPVEDVPDVYE-QMDFIYEATGFPKHAIQSVQALAPNGVGALLGVP 275 (357)
T ss_dssp -TSCGGGHHHHSC-CEEEEEECSCCHHHHHHHHHHEEEEEEEEECCCC
T ss_pred -ccCHHHHHHhCC-CCCEEEECCCChHHHHHHHHHHhcCCEEEEEeCC
Confidence 0011100 0123 8999999999643445555666655444444333
No 279
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=57.71 E-value=8.6 Score=33.12 Aligned_cols=31 Identities=19% Similarity=0.195 Sum_probs=23.9
Q ss_pred eeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeC
Q 025793 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND 120 (248)
+||+|.|.|.+|..+++.+... ..+|..++-
T Consensus 1 m~I~iiG~G~mG~~~a~~L~~~---g~~V~~~~r 31 (335)
T 1txg_A 1 MIVSILGAGAMGSALSVPLVDN---GNEVRIWGT 31 (335)
T ss_dssp CEEEEESCCHHHHHHHHHHHHH---CCEEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHhC---CCeEEEEEc
Confidence 3799999999999999877643 246766654
No 280
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=57.42 E-value=8.3 Score=36.93 Aligned_cols=32 Identities=19% Similarity=0.357 Sum_probs=25.0
Q ss_pred eeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeC
Q 025793 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (248)
Q Consensus 86 ~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND 120 (248)
+++|+|.|+|.+|..+++.+... ..+|++.|-
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L~~~---G~~V~v~dr 35 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNMNDH---GFVVCAFNR 35 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHT---TCCEEEECS
T ss_pred CCEEEEEChhHHHHHHHHHHHHC---CCEEEEEeC
Confidence 35899999999999999988764 356666643
No 281
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=57.36 E-value=8.2 Score=36.42 Aligned_cols=31 Identities=26% Similarity=0.443 Sum_probs=24.0
Q ss_pred eeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeC
Q 025793 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND 120 (248)
+||+|.|+|.+|..+++.+... ..+|.+.|-
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~---G~~V~v~dr 32 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEK---GFKVAVFNR 32 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT---TCCEEEECS
T ss_pred CEEEEEChHHHHHHHHHHHHHC---CCEEEEEeC
Confidence 4899999999999999887754 246665553
No 282
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=57.29 E-value=8.2 Score=36.82 Aligned_cols=34 Identities=15% Similarity=0.219 Sum_probs=26.6
Q ss_pred cceeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeC
Q 025793 84 VAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (248)
Q Consensus 84 ~~~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND 120 (248)
+|..+|+|.|+|.+|..+++.+... ..+|++.|-
T Consensus 8 ~~~~~IgvIGlG~MG~~lA~~La~~---G~~V~v~dr 41 (497)
T 2p4q_A 8 HMSADFGLIGLAVMGQNLILNAADH---GFTVCAYNR 41 (497)
T ss_dssp -CCCSEEEECCSHHHHHHHHHHHHT---TCCEEEECS
T ss_pred cCCCCEEEEeeHHHHHHHHHHHHHC---CCEEEEEeC
Confidence 4778999999999999999988764 356666654
No 283
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=56.59 E-value=12 Score=32.24 Aligned_cols=31 Identities=19% Similarity=0.144 Sum_probs=24.1
Q ss_pred eeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeCC
Q 025793 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND~ 121 (248)
.||+|.|.|.||+.+++.+... ..+|+.. |.
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~---G~~V~l~-d~ 35 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFH---GFAVTAY-DI 35 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT---TCEEEEE-CS
T ss_pred CEEEEECCCHHHHHHHHHHHhC---CCeEEEE-eC
Confidence 4899999999999999887753 3576654 44
No 284
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=56.42 E-value=6.9 Score=34.73 Aligned_cols=28 Identities=18% Similarity=0.114 Sum_probs=21.2
Q ss_pred eEEEeCCChhhHHHHHHHhhCCCCCe-EEEEE
Q 025793 88 KVAINGFGRIGRNFLRCWHGRKDSPL-DVVVV 118 (248)
Q Consensus 88 kV~INGFGRIGRlvlR~~~~~~~~~l-~iVaI 118 (248)
+|.|.|-|.||.++++++... .. +|+++
T Consensus 193 ~VlV~GaG~vG~~a~qlak~~---Ga~~Vi~~ 221 (371)
T 1f8f_A 193 SFVTWGAGAVGLSALLAAKVC---GASIIIAV 221 (371)
T ss_dssp EEEEESCSHHHHHHHHHHHHH---TCSEEEEE
T ss_pred EEEEECCCHHHHHHHHHHHHc---CCCeEEEE
Confidence 799999999999888877543 23 46655
No 285
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=55.94 E-value=4.8 Score=39.02 Aligned_cols=35 Identities=23% Similarity=0.416 Sum_probs=25.6
Q ss_pred eeeEEEeCCChhhHHHHHHHhhCCCCC-eEEEEEeCC
Q 025793 86 KLKVAINGFGRIGRNFLRCWHGRKDSP-LDVVVVNDS 121 (248)
Q Consensus 86 ~vkV~INGFGRIGRlvlR~~~~~~~~~-l~iVaIND~ 121 (248)
+.||.|.|||-||+.++|.+..+.+-. .+|+.+ |+
T Consensus 13 ~~rVlIIGaGgVG~~va~lla~~~dv~~~~I~va-D~ 48 (480)
T 2ph5_A 13 KNRFVILGFGCVGQALMPLIFEKFDIKPSQVTII-AA 48 (480)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHHBCCCGGGEEEE-ES
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCCceeEEEEe-cc
Confidence 468999999999999999987653222 256655 44
No 286
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=55.80 E-value=12 Score=33.08 Aligned_cols=86 Identities=17% Similarity=0.154 Sum_probs=49.3
Q ss_pred eeeEEEeCC-ChhhHHHHHHHhhCCCCCeEEE-EEeCCCChhhhhhhccccCcCcccCceEEEecCCcEEECCeEEEEEe
Q 025793 86 KLKVAINGF-GRIGRNFLRCWHGRKDSPLDVV-VVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVS 163 (248)
Q Consensus 86 ~vkV~INGF-GRIGRlvlR~~~~~~~~~l~iV-aIND~~~~e~~ayLLkYDStHGkf~g~V~v~e~~~L~inGk~I~v~~ 163 (248)
+.+|+|.|. |++|+.++|.+.+. .+++| .|| |... ++. +.| ++++.
T Consensus 13 ~~~v~V~Gasg~~G~~~~~~l~~~---g~~~V~~Vn-P~~~--------g~~------------------i~G--~~vy~ 60 (294)
T 2yv1_A 13 NTKAIVQGITGRQGSFHTKKMLEC---GTKIVGGVT-PGKG--------GQN------------------VHG--VPVFD 60 (294)
T ss_dssp TCCEEEETTTSHHHHHHHHHHHHT---TCCEEEEEC-TTCT--------TCE------------------ETT--EEEES
T ss_pred CCEEEEECCCCCHHHHHHHHHHhC---CCeEEEEeC-CCCC--------Cce------------------ECC--EeeeC
Confidence 468999999 99999999988764 34455 565 4210 000 122 12221
Q ss_pred cCCCCCCCCCCCcccEEecCcccccCchhhhHHHHcCCCEEEE
Q 025793 164 NRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVII 206 (248)
Q Consensus 164 ~~dP~~i~W~~~GidiVVE~TG~F~~~e~a~~HL~~GAKKVII 206 (248)
+.++++- +..+|++|.+|---...+-+..-++.|++-+|+
T Consensus 61 --sl~el~~-~~~~Dv~ii~vp~~~~~~~v~ea~~~Gi~~vVi 100 (294)
T 2yv1_A 61 --TVKEAVK-ETDANASVIFVPAPFAKDAVFEAIDAGIELIVV 100 (294)
T ss_dssp --SHHHHHH-HHCCCEEEECCCHHHHHHHHHHHHHTTCSEEEE
T ss_pred --CHHHHhh-cCCCCEEEEccCHHHHHHHHHHHHHCCCCEEEE
Confidence 1222221 125788887776655555555666678876554
No 287
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=55.73 E-value=20 Score=31.72 Aligned_cols=29 Identities=17% Similarity=0.288 Sum_probs=22.4
Q ss_pred eeEEEeCCChhhHHHHHHHhhCCCCCe-EEEEE
Q 025793 87 LKVAINGFGRIGRNFLRCWHGRKDSPL-DVVVV 118 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~~~~~l-~iVaI 118 (248)
-+|.|+|-|-||.++++++... .. +|+++
T Consensus 193 ~~VlV~GaG~vG~~a~qla~~~---Ga~~Vi~~ 222 (374)
T 2jhf_A 193 STCAVFGLGGVGLSVIMGCKAA---GAARIIGV 222 (374)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT---TCSEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHc---CCCeEEEE
Confidence 3799999999999998887654 24 56666
No 288
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=55.42 E-value=8.6 Score=36.10 Aligned_cols=30 Identities=20% Similarity=0.344 Sum_probs=23.9
Q ss_pred eeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEe
Q 025793 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIN 119 (248)
+||+|.|+|.+|+.+++.+... ..+|++.|
T Consensus 6 ~~IgvIG~G~mG~~lA~~L~~~---G~~V~v~d 35 (474)
T 2iz1_A 6 ANFGVVGMAVMGKNLALNVESR---GYTVAIYN 35 (474)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT---TCCEEEEC
T ss_pred CcEEEEeeHHHHHHHHHHHHhC---CCEEEEEc
Confidence 6899999999999999987753 34666554
No 289
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=55.28 E-value=12 Score=32.97 Aligned_cols=30 Identities=20% Similarity=0.182 Sum_probs=22.9
Q ss_pred eeEEEe-CCChhhHHHHHHHhhCCCCCeEEEEEe
Q 025793 87 LKVAIN-GFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (248)
Q Consensus 87 vkV~IN-GFGRIGRlvlR~~~~~~~~~l~iVaIN 119 (248)
-+|.|. |.|.||..+++++... ..+++++-
T Consensus 169 ~~VlV~Gg~g~iG~~~~~~a~~~---Ga~Vi~~~ 199 (353)
T 4dup_A 169 ESVLIHGGTSGIGTTAIQLARAF---GAEVYATA 199 (353)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHT---TCEEEEEE
T ss_pred CEEEEEcCCCHHHHHHHHHHHHc---CCEEEEEe
Confidence 379999 7899999999888654 34666664
No 290
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=54.75 E-value=9.4 Score=33.85 Aligned_cols=30 Identities=33% Similarity=0.385 Sum_probs=23.1
Q ss_pred eeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEe
Q 025793 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIN 119 (248)
-+|.|.|-|-||.++++++... ..+|+++.
T Consensus 182 ~~VlV~GaG~vG~~~~q~a~~~---Ga~Vi~~~ 211 (366)
T 2cdc_A 182 RKVLVVGTGPIGVLFTLLFRTY---GLEVWMAN 211 (366)
T ss_dssp CEEEEESCHHHHHHHHHHHHHH---TCEEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhC---CCEEEEEe
Confidence 4799999999999998887643 24777664
No 291
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=54.36 E-value=18 Score=32.10 Aligned_cols=29 Identities=21% Similarity=0.339 Sum_probs=22.4
Q ss_pred eeEEEeCCChhhHHHHHHHhhCCCCCe-EEEEE
Q 025793 87 LKVAINGFGRIGRNFLRCWHGRKDSPL-DVVVV 118 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~~~~~l-~iVaI 118 (248)
-+|.|.|.|-||.+.++++... .. +|+++
T Consensus 194 ~~VlV~GaG~vG~~a~qla~~~---Ga~~Vi~~ 223 (374)
T 1cdo_A 194 STCAVFGLGAVGLAAVMGCHSA---GAKRIIAV 223 (374)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT---TCSEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHc---CCCEEEEE
Confidence 3799999999999998887654 24 56666
No 292
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=54.30 E-value=9.2 Score=33.47 Aligned_cols=31 Identities=32% Similarity=0.292 Sum_probs=22.6
Q ss_pred ceeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEe
Q 025793 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (248)
Q Consensus 85 ~~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIN 119 (248)
|++||+|.|.|-||..+...+. . + .+|..+.
T Consensus 1 M~mkI~IiGaGa~G~~~a~~L~-~-g--~~V~~~~ 31 (307)
T 3ego_A 1 MSLKIGIIGGGSVGLLCAYYLS-L-Y--HDVTVVT 31 (307)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH-T-T--SEEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHh-c-C--CceEEEE
Confidence 4579999999999998887665 3 2 4665554
No 293
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=54.28 E-value=13 Score=32.96 Aligned_cols=29 Identities=17% Similarity=0.210 Sum_probs=21.9
Q ss_pred eeEEEeCCChhhHHHHHHHhhCCCCCe-EEEEE
Q 025793 87 LKVAINGFGRIGRNFLRCWHGRKDSPL-DVVVV 118 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~~~~~l-~iVaI 118 (248)
-+|.|+|-|-||.++++++... .. +|+++
T Consensus 192 ~~VlV~GaG~vG~~avqla~~~---Ga~~Vi~~ 221 (373)
T 2fzw_A 192 SVCAVFGLGGVGLAVIMGCKVA---GASRIIGV 221 (373)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH---TCSEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHc---CCCeEEEE
Confidence 3799999999999988877543 24 56665
No 294
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=53.77 E-value=7.9 Score=34.67 Aligned_cols=100 Identities=17% Similarity=0.166 Sum_probs=51.7
Q ss_pred eeEEEeCCChhhHHHHHHHhhCCCCC-eEEEEEeCCCChhhhhhhccccCcCcccCceEEEecCCcEEECCeEEEEEecC
Q 025793 87 LKVAINGFGRIGRNFLRCWHGRKDSP-LDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNR 165 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~~~~~-l~iVaIND~~~~e~~ayLLkYDStHGkf~g~V~v~e~~~L~inGk~I~v~~~~ 165 (248)
-+|.|+|-|.||.+.++++... . .+|+++-. +.+.+..+.++ |. +..++.+.. + ..
T Consensus 197 ~~VlV~GaG~vG~~aiqlak~~---Ga~~Vi~~~~--~~~~~~~~~~l----Ga---~~vi~~~~~----~-------~~ 253 (380)
T 1vj0_A 197 KTVVIQGAGPLGLFGVVIARSL---GAENVIVIAG--SPNRLKLAEEI----GA---DLTLNRRET----S-------VE 253 (380)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT---TBSEEEEEES--CHHHHHHHHHT----TC---SEEEETTTS----C-------HH
T ss_pred CEEEEECcCHHHHHHHHHHHHc---CCceEEEEcC--CHHHHHHHHHc----CC---cEEEecccc----C-------cc
Confidence 3799999999999999887653 2 36666642 23444443332 31 111110000 0 00
Q ss_pred CC-CCC-CC-CCCcccEEecCcccccCchhhhHHHHcCCCEEEEcCC
Q 025793 166 DP-LQL-PW-AELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (248)
Q Consensus 166 dP-~~i-~W-~~~GidiVVE~TG~F~~~e~a~~HL~~GAKKVIISAP 209 (248)
+. +.+ .+ ...|+|+||||+|.-...+.+...|+.|-+=|++..+
T Consensus 254 ~~~~~v~~~~~g~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~ 300 (380)
T 1vj0_A 254 ERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRGGFYSVAGVA 300 (380)
T ss_dssp HHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCC
T ss_pred hHHHHHHHHhCCCCCcEEEECCCCHHHHHHHHHHHhcCCEEEEEecC
Confidence 00 000 01 1248999999999643445555666655443444333
No 295
>3mw9_A GDH 1, glutamate dehydrogenase 1; allostery, inhibition, oxidoreducta; HET: GLU GTP NAD; 2.40A {Bos taurus} SCOP: c.2.1.7 c.58.1.1 PDB: 3mvo_A* 3mvq_A* 3qmu_A* 3etd_A* 3ete_A* 3etg_A* 1l1f_A 1nr1_A 1nr7_A 1nqt_A 1hwx_A* 1hwy_A* 1hwz_A*
Probab=53.62 E-value=50 Score=32.14 Aligned_cols=32 Identities=25% Similarity=0.480 Sum_probs=27.2
Q ss_pred eeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeCC
Q 025793 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND~ 121 (248)
.+|+|-|||-.|..+++.+.+. ...+|+|-|.
T Consensus 245 ~tVaVQG~GNVG~~aa~~L~e~---GakVVavsDs 276 (501)
T 3mw9_A 245 KTFVVQGFGNVGLHSMRYLHRF---GAKCITVGES 276 (501)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT---TCEEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHHC---CCEEEEEEcC
Confidence 5899999999999999998864 4688988773
No 296
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=53.50 E-value=14 Score=32.33 Aligned_cols=32 Identities=25% Similarity=0.244 Sum_probs=22.9
Q ss_pred ceeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEe
Q 025793 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (248)
Q Consensus 85 ~~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIN 119 (248)
|++||+|.|.|-||..++..+... ..+|..+.
T Consensus 1 M~mkI~IiGaGaiG~~~a~~L~~~---g~~V~~~~ 32 (320)
T 3i83_A 1 MSLNILVIGTGAIGSFYGALLAKT---GHCVSVVS 32 (320)
T ss_dssp --CEEEEESCCHHHHHHHHHHHHT---TCEEEEEC
T ss_pred CCCEEEEECcCHHHHHHHHHHHhC---CCeEEEEe
Confidence 457999999999999988776543 24665554
No 297
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=53.02 E-value=11 Score=35.73 Aligned_cols=32 Identities=25% Similarity=0.417 Sum_probs=25.4
Q ss_pred eeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeC
Q 025793 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (248)
Q Consensus 86 ~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND 120 (248)
+.+|+|.|+|.+|..+++.+... ..+|++.|-
T Consensus 15 ~~~IgvIGlG~MG~~lA~~La~~---G~~V~v~~r 46 (480)
T 2zyd_A 15 KQQIGVVGMAVMGRNLALNIESR---GYTVSIFNR 46 (480)
T ss_dssp CBSEEEECCSHHHHHHHHHHHTT---TCCEEEECS
T ss_pred CCeEEEEccHHHHHHHHHHHHhC---CCeEEEEeC
Confidence 57899999999999999987753 357666654
No 298
>2jv8_A Uncharacterized protein NE1242; solution structure, NESG, structural genomics, unknown function, PSI-2; NMR {Nitrosomonas europaea atcc 19718}
Probab=52.38 E-value=7.1 Score=28.15 Aligned_cols=29 Identities=28% Similarity=0.646 Sum_probs=21.5
Q ss_pred ceEEEecCCcEEECCeEEEEEecCCCCCCCC
Q 025793 142 ADVKIVDNETISVDGKLIKVVSNRDPLQLPW 172 (248)
Q Consensus 142 g~V~v~e~~~L~inGk~I~v~~~~dP~~i~W 172 (248)
|+|.++++..|.||||.|.... |.-+-+|
T Consensus 11 gtidieddtsltingkeisyvh--davknkw 39 (73)
T 2jv8_A 11 GTIDIEDDTSLTINGKEISYVH--DAVKNKW 39 (73)
T ss_dssp EEEEEETTEEEEETTEECCCCC--CSSSCCC
T ss_pred CeeeeccCceeEECCEEeehHH--HHHhccc
Confidence 7888888889999999987654 4444444
No 299
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=51.41 E-value=36 Score=29.80 Aligned_cols=29 Identities=24% Similarity=0.117 Sum_probs=22.1
Q ss_pred eeEEEeCCChhhHHHHHHHhhCCCCCeEEEEE
Q 025793 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVV 118 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaI 118 (248)
-+|.|.|-|-||.++++++..+ ..+|+++
T Consensus 170 ~~VlV~GaG~vG~~a~qla~~~---Ga~Vi~~ 198 (352)
T 1e3j_A 170 TTVLVIGAGPIGLVSVLAAKAY---GAFVVCT 198 (352)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT---TCEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHc---CCEEEEE
Confidence 3799999999999998887654 2455555
No 300
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=51.35 E-value=23 Score=29.47 Aligned_cols=30 Identities=23% Similarity=0.382 Sum_probs=23.4
Q ss_pred eeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEe
Q 025793 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIN 119 (248)
+||.|-|-|.||+.+++.+.++ + .+|+++.
T Consensus 4 ~~ilVtGaG~iG~~l~~~L~~~-g--~~V~~~~ 33 (286)
T 3gpi_A 4 SKILIAGCGDLGLELARRLTAQ-G--HEVTGLR 33 (286)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-T--CCEEEEE
T ss_pred CcEEEECCCHHHHHHHHHHHHC-C--CEEEEEe
Confidence 5799999999999999998875 2 4555553
No 301
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=50.90 E-value=20 Score=29.67 Aligned_cols=45 Identities=16% Similarity=0.344 Sum_probs=31.5
Q ss_pred ceeeEEEeC-CChhhHHHHHHHhhCCCCCeEEEEEeC----CCChhhhhhhcc
Q 025793 85 AKLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND----SGGVKNASHLLK 132 (248)
Q Consensus 85 ~~vkV~ING-FGRIGRlvlR~~~~~~~~~l~iVaIND----~~~~e~~ayLLk 132 (248)
|++||.|-| -|.||+.+++.+.++ ..+|+++.- ..+.+.+..+++
T Consensus 4 M~m~ilVtGatG~iG~~l~~~L~~~---g~~V~~~~r~~~D~~d~~~~~~~~~ 53 (287)
T 3sc6_A 4 MKERVIITGANGQLGKQLQEELNPE---EYDIYPFDKKLLDITNISQVQQVVQ 53 (287)
T ss_dssp -CEEEEEESTTSHHHHHHHHHSCTT---TEEEEEECTTTSCTTCHHHHHHHHH
T ss_pred ceeEEEEECCCCHHHHHHHHHHHhC---CCEEEEecccccCCCCHHHHHHHHH
Confidence 667899999 599999999988764 367777642 245555555554
No 302
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=50.81 E-value=8.1 Score=33.74 Aligned_cols=95 Identities=20% Similarity=0.120 Sum_probs=52.3
Q ss_pred eeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeCCCChhhhhhhccccCcCcccCceEEEecCCcEEECCeEEEEEecCC
Q 025793 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRD 166 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND~~~~e~~ayLLkYDStHGkf~g~V~v~e~~~L~inGk~I~v~~~~d 166 (248)
-+|.|+|-|-||.+.++++..+ ..+++++-- +.+.+.++.++ | .+..++ .++
T Consensus 168 ~~VlV~GaG~vG~~a~qla~~~---Ga~Vi~~~~--~~~~~~~~~~l----G---a~~~i~----------------~~~ 219 (340)
T 3s2e_A 168 QWVVISGIGGLGHVAVQYARAM---GLRVAAVDI--DDAKLNLARRL----G---AEVAVN----------------ARD 219 (340)
T ss_dssp SEEEEECCSTTHHHHHHHHHHT---TCEEEEEES--CHHHHHHHHHT----T---CSEEEE----------------TTT
T ss_pred CEEEEECCCHHHHHHHHHHHHC---CCeEEEEeC--CHHHHHHHHHc----C---CCEEEe----------------CCC
Confidence 3699999999999998887654 247777632 23444444332 2 111111 111
Q ss_pred CC---CCCCCCCcccEEecCcccccCchhhhHHHHcCCCEEEEcCC
Q 025793 167 PL---QLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (248)
Q Consensus 167 P~---~i~W~~~GidiVVE~TG~F~~~e~a~~HL~~GAKKVIISAP 209 (248)
+. .+.-..-|+|+|+||+|.-...+.+-..|+.|-+=|++..+
T Consensus 220 ~~~~~~~~~~~g~~d~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~ 265 (340)
T 3s2e_A 220 TDPAAWLQKEIGGAHGVLVTAVSPKAFSQAIGMVRRGGTIALNGLP 265 (340)
T ss_dssp SCHHHHHHHHHSSEEEEEESSCCHHHHHHHHHHEEEEEEEEECSCC
T ss_pred cCHHHHHHHhCCCCCEEEEeCCCHHHHHHHHHHhccCCEEEEeCCC
Confidence 11 00000118999999998654445555666655444444333
No 303
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=50.52 E-value=13 Score=32.48 Aligned_cols=30 Identities=20% Similarity=0.250 Sum_probs=22.4
Q ss_pred eeEEEeCCC-hhhHHHHHHHhhCCCCCeEEEEEe
Q 025793 87 LKVAINGFG-RIGRNFLRCWHGRKDSPLDVVVVN 119 (248)
Q Consensus 87 vkV~INGFG-RIGRlvlR~~~~~~~~~l~iVaIN 119 (248)
-+|.|.|-| -||.++++++... ..+++++-
T Consensus 146 ~~VlV~Ga~g~iG~~~~~~a~~~---Ga~Vi~~~ 176 (340)
T 3gms_A 146 DVLLVNACGSAIGHLFAQLSQIL---NFRLIAVT 176 (340)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHH---TCEEEEEE
T ss_pred CEEEEeCCccHHHHHHHHHHHHc---CCEEEEEe
Confidence 379999997 9999998877643 24666664
No 304
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=49.93 E-value=15 Score=33.32 Aligned_cols=30 Identities=33% Similarity=0.472 Sum_probs=23.5
Q ss_pred eeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEe
Q 025793 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (248)
Q Consensus 86 ~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIN 119 (248)
..||+|.|.|.+|+.+++.+... .++.+.+
T Consensus 16 ~~~v~IiGaG~iG~~ia~~L~~~----~~V~V~~ 45 (365)
T 2z2v_A 16 HMKVLILGAGNIGRAIAWDLKDE----FDVYIGD 45 (365)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTT----SEEEEEE
T ss_pred CCeEEEEcCCHHHHHHHHHHHcC----CeEEEEE
Confidence 36899999999999999987653 5655444
No 305
>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A
Probab=49.89 E-value=18 Score=34.17 Aligned_cols=33 Identities=33% Similarity=0.406 Sum_probs=28.1
Q ss_pred eeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeCC
Q 025793 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND~ 121 (248)
.+|+|-|||-.|+.+++.+.++ ...++|+|-|.
T Consensus 210 ~~vaVqG~GnVG~~~a~~L~e~--~GakvVavsD~ 242 (415)
T 2tmg_A 210 ATVAVQGFGNVGQFAALLISQE--LGSKVVAVSDS 242 (415)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCCEEEEEECS
T ss_pred CEEEEECCcHHHHHHHHHHHHh--cCCEEEEEEeC
Confidence 6899999999999999988872 24799999886
No 306
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=49.74 E-value=13 Score=31.97 Aligned_cols=31 Identities=16% Similarity=0.174 Sum_probs=24.5
Q ss_pred eeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeC
Q 025793 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND 120 (248)
.+|+|.|.|.+|+.+++.+... ..+|.++|-
T Consensus 130 ~~v~iiGaG~~g~aia~~L~~~---g~~V~v~~r 160 (275)
T 2hk9_A 130 KSILVLGAGGASRAVIYALVKE---GAKVFLWNR 160 (275)
T ss_dssp SEEEEECCSHHHHHHHHHHHHH---TCEEEEECS
T ss_pred CEEEEECchHHHHHHHHHHHHc---CCEEEEEEC
Confidence 5899999999999999988754 246666654
No 307
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=49.08 E-value=31 Score=30.66 Aligned_cols=40 Identities=8% Similarity=-0.100 Sum_probs=27.6
Q ss_pred eeEEEeCC-ChhhHHHHHHHhhCCCCCeEEEEEeCCCChhhhhhhcc
Q 025793 87 LKVAINGF-GRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLK 132 (248)
Q Consensus 87 vkV~INGF-GRIGRlvlR~~~~~~~~~l~iVaIND~~~~e~~ayLLk 132 (248)
-+|.|+|- |-||.+.++++... ..+++++-. .+.+..+.+
T Consensus 166 ~~VlV~Ga~G~vG~~a~qla~~~---Ga~Vi~~~~---~~~~~~~~~ 206 (371)
T 3gqv_A 166 VYVLVYGGSTATATVTMQMLRLS---GYIPIATCS---PHNFDLAKS 206 (371)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHT---TCEEEEEEC---GGGHHHHHH
T ss_pred cEEEEECCCcHHHHHHHHHHHHC---CCEEEEEeC---HHHHHHHHH
Confidence 47999999 89999998887654 247777743 344444433
No 308
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=48.64 E-value=21 Score=28.35 Aligned_cols=30 Identities=30% Similarity=0.424 Sum_probs=23.2
Q ss_pred eeEEEeCC-ChhhHHHHHHHhhCCCCCeEEEEEe
Q 025793 87 LKVAINGF-GRIGRNFLRCWHGRKDSPLDVVVVN 119 (248)
Q Consensus 87 vkV~INGF-GRIGRlvlR~~~~~~~~~l~iVaIN 119 (248)
|||.|-|- |.||+.+++.+.++ ..+|+++-
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~---g~~V~~~~ 31 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRR---GHEVLAVV 31 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT---TCEEEEEE
T ss_pred CEEEEEcCCCHHHHHHHHHHHHC---CCEEEEEE
Confidence 36889986 99999999998875 24666553
No 309
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=48.22 E-value=50 Score=27.56 Aligned_cols=31 Identities=19% Similarity=0.226 Sum_probs=23.9
Q ss_pred eeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEe
Q 025793 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (248)
Q Consensus 86 ~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIN 119 (248)
+.+|+|.|-|..|..+++.+..+ .++++.|-
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~~---g~~v~vie 33 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRRS---GLSYVILD 33 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHS---SCCEEEEC
T ss_pred cCCEEEECcCHHHHHHHHHHHHC---CCCEEEEE
Confidence 36899999999999888877654 35666664
No 310
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=47.86 E-value=17 Score=33.38 Aligned_cols=29 Identities=28% Similarity=0.570 Sum_probs=22.9
Q ss_pred eeEEEeCCChhhHHHHHHHhhCCCCCeEEEEE
Q 025793 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVV 118 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaI 118 (248)
+||+|.|.|.+|..++..+... ..+|+.+
T Consensus 1 mkI~VIG~G~vG~~~A~~la~~---G~~V~~~ 29 (436)
T 1mv8_A 1 MRISIFGLGYVGAVCAGCLSAR---GHEVIGV 29 (436)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT---TCEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHC---CCEEEEE
Confidence 4799999999999999887653 3566655
No 311
>3k92_A NAD-GDH, NAD-specific glutamate dehydrogenase; ROCG, oxidoreductase; 2.30A {Bacillus subtilis} PDB: 3k8z_A
Probab=47.81 E-value=16 Score=34.77 Aligned_cols=33 Identities=24% Similarity=0.508 Sum_probs=28.1
Q ss_pred eeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeCC
Q 025793 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (248)
Q Consensus 86 ~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND~ 121 (248)
..+|+|-|||-.|..+++.+.+. ..++|+|-|.
T Consensus 221 g~~vaVqG~GnVG~~aa~~l~e~---GakVVavsD~ 253 (424)
T 3k92_A 221 NARIIIQGFGNAGSFLAKFMHDA---GAKVIGISDA 253 (424)
T ss_dssp GCEEEEECCSHHHHHHHHHHHHH---TCEEEEEECS
T ss_pred cCEEEEECCCHHHHHHHHHHHHC---CCEEEEEECC
Confidence 46899999999999999988764 4688999886
No 312
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=47.63 E-value=8.8 Score=33.30 Aligned_cols=30 Identities=17% Similarity=0.172 Sum_probs=23.1
Q ss_pred eeEEEeC-CChhhHHHHHHHhhCCCCCeEEEEEe
Q 025793 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVN 119 (248)
Q Consensus 87 vkV~ING-FGRIGRlvlR~~~~~~~~~l~iVaIN 119 (248)
-+|.|+| -|-||.+.+.++... ..+++++-
T Consensus 154 ~~vlV~Ga~G~vG~~a~q~a~~~---Ga~vi~~~ 184 (321)
T 3tqh_A 154 DVVLIHAGAGGVGHLAIQLAKQK---GTTVITTA 184 (321)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHT---TCEEEEEE
T ss_pred CEEEEEcCCcHHHHHHHHHHHHc---CCEEEEEe
Confidence 3699997 999999998887654 24777764
No 313
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=47.59 E-value=14 Score=34.74 Aligned_cols=30 Identities=23% Similarity=0.429 Sum_probs=23.9
Q ss_pred eeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEe
Q 025793 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIN 119 (248)
.+|.|-|+||+|+.+++.+.+. ..++++|-
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~---g~~v~vid 378 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRK---PVPFILID 378 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT---TCCEEEEE
T ss_pred CCEEEECCCHHHHHHHHHHHHC---CCCEEEEE
Confidence 5799999999999999998764 35555553
No 314
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=47.49 E-value=22 Score=27.91 Aligned_cols=30 Identities=30% Similarity=0.451 Sum_probs=23.3
Q ss_pred eeEEEeC-CChhhHHHHHHHhhCCCCCeEEEEEe
Q 025793 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVN 119 (248)
Q Consensus 87 vkV~ING-FGRIGRlvlR~~~~~~~~~l~iVaIN 119 (248)
|||.|-| -|.||+.+++.+.++ ..+|+++.
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~---g~~V~~~~ 31 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNR---GHEVTAIV 31 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT---TCEEEEEE
T ss_pred CeEEEEcCCchhHHHHHHHHHhC---CCEEEEEE
Confidence 4789999 599999999998875 25666554
No 315
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=47.46 E-value=26 Score=30.09 Aligned_cols=93 Identities=15% Similarity=0.100 Sum_probs=49.9
Q ss_pred eEEEeCC-ChhhHHHHHHHhhCCCCCeEEEEEeCCCChhhhhhhccccCcCcccCceEEEecCCcEEECCeEEEEEecCC
Q 025793 88 KVAINGF-GRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRD 166 (248)
Q Consensus 88 kV~INGF-GRIGRlvlR~~~~~~~~~l~iVaIND~~~~e~~ayLLkYDStHGkf~g~V~v~e~~~L~inGk~I~v~~~~d 166 (248)
+|.|+|- |-||.+.+.++... ..+++++-.. .+.+.++.++ | .+..++ .++
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~---Ga~Vi~~~~~--~~~~~~~~~l----G---a~~vi~----------------~~~ 200 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKL---GYQVAAVSGR--ESTHGYLKSL----G---ANRILS----------------RDE 200 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHT---TCCEEEEESC--GGGHHHHHHH----T---CSEEEE----------------GGG
T ss_pred eEEEECCCcHHHHHHHHHHHHc---CCEEEEEeCC--HHHHHHHHhc----C---CCEEEe----------------cCC
Confidence 4999998 99999998887654 2467766432 2344444332 3 111111 011
Q ss_pred CC-CCCCCCCcccEEecCcccccCchhhhHHHHcCCCEEEEcCC
Q 025793 167 PL-QLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (248)
Q Consensus 167 P~-~i~W~~~GidiVVE~TG~F~~~e~a~~HL~~GAKKVIISAP 209 (248)
+. .-....-|+|+|+||+|.- ..+.+...|+.|-+=|++..+
T Consensus 201 ~~~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~iv~~G~~ 243 (324)
T 3nx4_A 201 FAESRPLEKQLWAGAIDTVGDK-VLAKVLAQMNYGGCVAACGLA 243 (324)
T ss_dssp SSCCCSSCCCCEEEEEESSCHH-HHHHHHHTEEEEEEEEECCCT
T ss_pred HHHHHhhcCCCccEEEECCCcH-HHHHHHHHHhcCCEEEEEecC
Confidence 11 0112234899999999953 333444455544443444333
No 316
>2yfq_A Padgh, NAD-GDH, NAD-specific glutamate dehydrogenase; oxidoreductase; 2.94A {Peptoniphilus asaccharolyticus}
Probab=47.38 E-value=13 Score=35.26 Aligned_cols=33 Identities=21% Similarity=0.386 Sum_probs=28.3
Q ss_pred eeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeCCC
Q 025793 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSG 122 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND~~ 122 (248)
.+|+|-|||-.|+.+++.+.+. ..++|+|-|..
T Consensus 213 ~~vaVqG~GnVG~~~a~~L~~~---GakvVavsD~~ 245 (421)
T 2yfq_A 213 AKIAVQGFGNVGTFTVKNIERQ---GGKVCAIAEWD 245 (421)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT---TCCEEECCBCC
T ss_pred CEEEEECcCHHHHHHHHHHHHC---CCEEEEEEecC
Confidence 5899999999999999998874 47889888864
No 317
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=47.22 E-value=19 Score=31.80 Aligned_cols=31 Identities=16% Similarity=0.177 Sum_probs=24.7
Q ss_pred eeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeC
Q 025793 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND 120 (248)
.|||+.|+|++|+.++|.++.. ..++.+-|-
T Consensus 4 ~kIgfIGlG~MG~~mA~~L~~~---G~~v~v~dr 34 (300)
T 3obb_A 4 KQIAFIGLGHMGAPMATNLLKA---GYLLNVFDL 34 (300)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT---TCEEEEECS
T ss_pred CEEEEeeehHHHHHHHHHHHhC---CCeEEEEcC
Confidence 3899999999999999988763 367666653
No 318
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=46.76 E-value=14 Score=29.20 Aligned_cols=85 Identities=19% Similarity=0.141 Sum_probs=51.5
Q ss_pred eeeEEEeCC----ChhhHHHHHHHhhCCCCCeEEEEEeCCCChhhhhhhccccCcCcccCceEEEecCCcEEECCeEEEE
Q 025793 86 KLKVAINGF----GRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKV 161 (248)
Q Consensus 86 ~vkV~INGF----GRIGRlvlR~~~~~~~~~l~iVaIND~~~~e~~ayLLkYDStHGkf~g~V~v~e~~~L~inGk~I~v 161 (248)
+.+|+|.|. |++|+.++|.+.+. .+++..||-.. . | .+ +.|.+ +
T Consensus 13 p~~IavIGas~~~g~~G~~~~~~L~~~---G~~v~~vnp~~----~----------g---~~----------i~G~~--~ 60 (145)
T 2duw_A 13 TRTIALVGASDKPDRPSYRVMKYLLDQ---GYHVIPVSPKV----A----------G---KT----------LLGQQ--G 60 (145)
T ss_dssp CCCEEEESCCSCTTSHHHHHHHHHHHH---TCCEEEECSSS----T----------T---SE----------ETTEE--C
T ss_pred CCEEEEECcCCCCCChHHHHHHHHHHC---CCEEEEeCCcc----c----------c---cc----------cCCee--c
Confidence 347999999 89999999987653 35677776321 0 0 01 12321 1
Q ss_pred EecCCCCCCCCCCCcccEEecCcccccCchhhhHHHHcCCCEEEEc
Q 025793 162 VSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIIT 207 (248)
Q Consensus 162 ~~~~dP~~i~W~~~GidiVVE~TG~F~~~e~a~~HL~~GAKKVIIS 207 (248)
..++++++- .+|+|+=|+-.-.-.+-+..-++.|++.|++.
T Consensus 61 --~~sl~el~~---~~Dlvii~vp~~~v~~v~~~~~~~g~~~i~i~ 101 (145)
T 2duw_A 61 --YATLADVPE---KVDMVDVFRNSEAAWGVAQEAIAIGAKTLWLQ 101 (145)
T ss_dssp --CSSTTTCSS---CCSEEECCSCSTHHHHHHHHHHHHTCCEEECC
T ss_pred --cCCHHHcCC---CCCEEEEEeCHHHHHHHHHHHHHcCCCEEEEc
Confidence 234666652 68988877764322333444445789988876
No 319
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=46.62 E-value=16 Score=31.85 Aligned_cols=32 Identities=25% Similarity=0.311 Sum_probs=21.6
Q ss_pred ceeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEe
Q 025793 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (248)
Q Consensus 85 ~~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIN 119 (248)
|++||+|.|.|-||..++..+... + .+|..+.
T Consensus 1 M~mkI~IiGaGaiG~~~a~~L~~~-g--~~V~~~~ 32 (312)
T 3hn2_A 1 MSLRIAIVGAGALGLYYGALLQRS-G--EDVHFLL 32 (312)
T ss_dssp ---CEEEECCSTTHHHHHHHHHHT-S--CCEEEEC
T ss_pred CCCEEEEECcCHHHHHHHHHHHHC-C--CeEEEEE
Confidence 457899999999999988776543 2 3555443
No 320
>1v9l_A Glutamate dehydrogenase; protein-NAD complex, oxidoreductase; HET: NAD; 2.80A {Pyrobaculum islandicum} SCOP: c.2.1.7 c.58.1.1
Probab=45.98 E-value=23 Score=33.58 Aligned_cols=32 Identities=31% Similarity=0.383 Sum_probs=28.1
Q ss_pred eeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeCC
Q 025793 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND~ 121 (248)
.+|+|-|||-.|..+++.+.+. ..++|+|.|.
T Consensus 211 k~vaVqG~GnVG~~aa~~L~e~---GakVVavsD~ 242 (421)
T 1v9l_A 211 KTVAIQGMGNVGRWTAYWLEKM---GAKVIAVSDI 242 (421)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT---TCEEEEEECS
T ss_pred CEEEEECcCHHHHHHHHHHHHC---CCEEEEEECC
Confidence 5899999999999999988764 5799999886
No 321
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=45.89 E-value=30 Score=30.18 Aligned_cols=29 Identities=7% Similarity=-0.087 Sum_probs=22.7
Q ss_pred eeEEEeCC-ChhhHHHHHHHhhCCCCCeEEEEE
Q 025793 87 LKVAINGF-GRIGRNFLRCWHGRKDSPLDVVVV 118 (248)
Q Consensus 87 vkV~INGF-GRIGRlvlR~~~~~~~~~l~iVaI 118 (248)
-+|.|.|- |.||+.+++++..+ ..+++++
T Consensus 168 ~~vlV~Gasg~iG~~~~~~a~~~---G~~Vi~~ 197 (343)
T 2eih_A 168 DDVLVMAAGSGVSVAAIQIAKLF---GARVIAT 197 (343)
T ss_dssp CEEEECSTTSTTHHHHHHHHHHT---TCEEEEE
T ss_pred CEEEEECCCchHHHHHHHHHHHC---CCEEEEE
Confidence 47999999 99999999987654 2466665
No 322
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=45.78 E-value=15 Score=32.99 Aligned_cols=32 Identities=22% Similarity=0.255 Sum_probs=23.7
Q ss_pred eeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEe
Q 025793 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (248)
Q Consensus 86 ~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIN 119 (248)
++||+|.|.|.+|..++..+... ...+|..+.
T Consensus 2 ~mkI~ViGaG~~G~~~a~~La~~--~G~~V~~~~ 33 (404)
T 3c7a_A 2 TVKVCVCGGGNGAHTLSGLAASR--DGVEVRVLT 33 (404)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTS--TTEEEEEEC
T ss_pred CceEEEECCCHHHHHHHHHHHhC--CCCEEEEEe
Confidence 46999999999999998876432 135666664
No 323
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=45.60 E-value=11 Score=33.14 Aligned_cols=32 Identities=13% Similarity=0.213 Sum_probs=23.9
Q ss_pred eeEEEeCC-ChhhHHHHHHHhhCCCCCeEEEEEeC
Q 025793 87 LKVAINGF-GRIGRNFLRCWHGRKDSPLDVVVVND 120 (248)
Q Consensus 87 vkV~INGF-GRIGRlvlR~~~~~~~~~l~iVaIND 120 (248)
-+|.|+|- |-+|.+.++++... ...+|+++..
T Consensus 144 ~~VlV~Ga~G~vG~~a~qla~~~--g~~~V~~~~~ 176 (349)
T 4a27_A 144 MSVLVHSAGGGVGQAVAQLCSTV--PNVTVFGTAS 176 (349)
T ss_dssp CEEEESSTTSHHHHHHHHHHTTS--TTCEEEEEEC
T ss_pred CEEEEEcCCcHHHHHHHHHHHHc--CCcEEEEeCC
Confidence 37999999 99999988877532 2357777753
No 324
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=45.41 E-value=23 Score=30.67 Aligned_cols=30 Identities=17% Similarity=0.059 Sum_probs=22.5
Q ss_pred eeEEEeC-CChhhHHHHHHHhhCCCCCeEEEEEe
Q 025793 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVN 119 (248)
Q Consensus 87 vkV~ING-FGRIGRlvlR~~~~~~~~~l~iVaIN 119 (248)
-+|.|.| -|.||+.+++.+... ..+++++-
T Consensus 147 ~~vlV~Ga~ggiG~~~~~~a~~~---G~~Vi~~~ 177 (333)
T 1wly_A 147 DYVLIHAAAGGMGHIMVPWARHL---GATVIGTV 177 (333)
T ss_dssp CEEEETTTTSTTHHHHHHHHHHT---TCEEEEEE
T ss_pred CEEEEECCccHHHHHHHHHHHHC---CCEEEEEe
Confidence 3699999 599999999987754 24666553
No 325
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=45.25 E-value=24 Score=27.60 Aligned_cols=82 Identities=23% Similarity=0.165 Sum_probs=50.2
Q ss_pred eeEEEeCC----ChhhHHHHHHHhhCCCCCeEEEEEeCCCChhhhhhhccccCcCcccCceEEEecCCcEEECCeEEEEE
Q 025793 87 LKVAINGF----GRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVV 162 (248)
Q Consensus 87 vkV~INGF----GRIGRlvlR~~~~~~~~~l~iVaIND~~~~e~~ayLLkYDStHGkf~g~V~v~e~~~L~inGk~I~v~ 162 (248)
.+|+|.|. |++|+.+++.+.+. .+++..||-.. +. +.|.+ +
T Consensus 23 ~~iaVVGas~~~g~~G~~~~~~l~~~---G~~v~~Vnp~~-----------~~------------------i~G~~--~- 67 (144)
T 2d59_A 23 KKIALVGASPKPERDANIVMKYLLEH---GYDVYPVNPKY-----------EE------------------VLGRK--C- 67 (144)
T ss_dssp CEEEEETCCSCTTSHHHHHHHHHHHT---TCEEEEECTTC-----------SE------------------ETTEE--C-
T ss_pred CEEEEEccCCCCCchHHHHHHHHHHC---CCEEEEECCCC-----------Ce------------------ECCee--c-
Confidence 47999999 79999999987653 35787776321 11 12321 1
Q ss_pred ecCCCCCCCCCCCcccEEecCcccccCchhhhHHHHcCCCEEEEc
Q 025793 163 SNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIIT 207 (248)
Q Consensus 163 ~~~dP~~i~W~~~GidiVVE~TG~F~~~e~a~~HL~~GAKKVIIS 207 (248)
-.++++++- .+|+|+=++-.-...+-+..-++.|++.++++
T Consensus 68 -y~sl~~l~~---~vDlvvi~vp~~~~~~vv~~~~~~gi~~i~~~ 108 (144)
T 2d59_A 68 -YPSVLDIPD---KIEVVDLFVKPKLTMEYVEQAIKKGAKVVWFQ 108 (144)
T ss_dssp -BSSGGGCSS---CCSEEEECSCHHHHHHHHHHHHHHTCSEEEEC
T ss_pred -cCCHHHcCC---CCCEEEEEeCHHHHHHHHHHHHHcCCCEEEEC
Confidence 223445542 58888766655333344444456799988775
No 326
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=45.08 E-value=16 Score=31.42 Aligned_cols=23 Identities=30% Similarity=0.346 Sum_probs=18.0
Q ss_pred ceeeEEEeCCChhhHHHHHHHhh
Q 025793 85 AKLKVAINGFGRIGRNFLRCWHG 107 (248)
Q Consensus 85 ~~vkV~INGFGRIGRlvlR~~~~ 107 (248)
|++||+|.|.|-||..+...+..
T Consensus 1 M~mkI~iiGaGa~G~~~a~~L~~ 23 (294)
T 3g17_A 1 MSLSVAIIGPGAVGTTIAYELQQ 23 (294)
T ss_dssp --CCEEEECCSHHHHHHHHHHHH
T ss_pred CCcEEEEECCCHHHHHHHHHHHH
Confidence 45799999999999988876654
No 327
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=45.02 E-value=19 Score=31.15 Aligned_cols=30 Identities=27% Similarity=0.396 Sum_probs=22.0
Q ss_pred eEEEeCC-ChhhHHHHHHHhhCCCCCeEEEEEeC
Q 025793 88 KVAINGF-GRIGRNFLRCWHGRKDSPLDVVVVND 120 (248)
Q Consensus 88 kV~INGF-GRIGRlvlR~~~~~~~~~l~iVaIND 120 (248)
+|.|.|- |-||.+.++++..+ + .+++++-.
T Consensus 153 ~VlV~Ga~G~vG~~~~q~a~~~-G--a~vi~~~~ 183 (330)
T 1tt7_A 153 SVLVTGATGGVGGIAVSMLNKR-G--YDVVASTG 183 (330)
T ss_dssp CEEEESTTSHHHHHHHHHHHHH-T--CCEEEEES
T ss_pred eEEEECCCCHHHHHHHHHHHHC-C--CEEEEEeC
Confidence 5999997 99999988877643 2 35665543
No 328
>3a06_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; MEP pathway, isoprene biosynthesis, metal- NADP, oxidoreductase; HET: NDP; 2.00A {Thermotoga maritima} PDB: 3a14_A*
Probab=44.99 E-value=27 Score=32.89 Aligned_cols=42 Identities=17% Similarity=0.213 Sum_probs=30.8
Q ss_pred eeEEEeCC-ChhhHHHHHHHhhCCCCCeEEEEEeCCCChhhhhhh
Q 025793 87 LKVAINGF-GRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHL 130 (248)
Q Consensus 87 vkV~INGF-GRIGRlvlR~~~~~~~~~l~iVaIND~~~~e~~ayL 130 (248)
.||+|-|+ |.||.+.+.+.-.. ++++++++--..+++.+.-.
T Consensus 4 k~i~ILGsTGSIG~~tldVi~~~--~~~~vvaL~a~~n~~~l~~q 46 (376)
T 3a06_A 4 RTLVILGATGSIGTQTLDVLKKV--KGIRLIGISFHSNLELAFKI 46 (376)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHS--CSEEEEEEEESSCHHHHHHH
T ss_pred ceEEEECCCCHHHHHHHHHHHhC--CCeEEEEEEccCCHHHHHHH
Confidence 68999996 99999999887653 56899988433355555433
No 329
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=44.48 E-value=23 Score=30.46 Aligned_cols=23 Identities=22% Similarity=0.268 Sum_probs=18.9
Q ss_pred ceeeEEEeCCChhhHHHHHHHhh
Q 025793 85 AKLKVAINGFGRIGRNFLRCWHG 107 (248)
Q Consensus 85 ~~vkV~INGFGRIGRlvlR~~~~ 107 (248)
+++||+|.|.|.+|..++..+..
T Consensus 6 ~~mkI~IiGaG~vG~~~a~~l~~ 28 (319)
T 1lld_A 6 KPTKLAVIGAGAVGSTLAFAAAQ 28 (319)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHh
Confidence 34799999999999988877654
No 330
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=44.01 E-value=19 Score=33.60 Aligned_cols=32 Identities=22% Similarity=0.207 Sum_probs=24.3
Q ss_pred eeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEe
Q 025793 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIN 119 (248)
+||+|.|+|.+|..+++.+... +...+|++++
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~-g~G~~V~~~d 37 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHM-CPEIRVTVVD 37 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHH-CTTSEEEEEC
T ss_pred cEEEEECCCHHHHHHHHHHHhc-CCCCEEEEEE
Confidence 5899999999999999887653 1235776664
No 331
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=43.79 E-value=22 Score=33.47 Aligned_cols=33 Identities=30% Similarity=0.379 Sum_probs=25.9
Q ss_pred ceeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeC
Q 025793 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (248)
Q Consensus 85 ~~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND 120 (248)
++.+|.|-|+||.|+.+++.+.+. ..++++|..
T Consensus 126 ~~~hviI~G~g~~g~~la~~L~~~---~~~vvvid~ 158 (565)
T 4gx0_A 126 TRGHILIFGIDPITRTLIRKLESR---NHLFVVVTD 158 (565)
T ss_dssp CCSCEEEESCCHHHHHHHHHTTTT---TCCEEEEES
T ss_pred cCCeEEEECCChHHHHHHHHHHHC---CCCEEEEEC
Confidence 456899999999999999987643 467777743
No 332
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=43.42 E-value=25 Score=30.21 Aligned_cols=30 Identities=23% Similarity=0.284 Sum_probs=23.3
Q ss_pred eeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEe
Q 025793 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIN 119 (248)
.||+|.|.|.+|..+++.+... ..+|+.++
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~---G~~V~~~d 45 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAAT---GHTVVLVD 45 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT---TCEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHhC---CCeEEEEE
Confidence 4799999999999988877653 35766554
No 333
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=42.90 E-value=23 Score=34.25 Aligned_cols=31 Identities=16% Similarity=0.371 Sum_probs=23.7
Q ss_pred eeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeCC
Q 025793 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND~ 121 (248)
.+|+|.|+|.||+.+++.+... ..+|+ +.|+
T Consensus 266 KtVvVtGaGgIG~aiA~~Laa~---GA~Vi-v~D~ 296 (488)
T 3ond_A 266 KVAVVAGYGDVGKGCAAALKQA---GARVI-VTEI 296 (488)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT---TCEEE-EECS
T ss_pred CEEEEECCCHHHHHHHHHHHHC---CCEEE-EEcC
Confidence 4799999999999999987654 24655 4555
No 334
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=42.77 E-value=26 Score=31.46 Aligned_cols=32 Identities=25% Similarity=0.187 Sum_probs=25.1
Q ss_pred eeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeC
Q 025793 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (248)
Q Consensus 86 ~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND 120 (248)
+.+|.|.|.|.+|+.+++.+... ..+|++++-
T Consensus 167 ~~~VlViGaGgvG~~aa~~a~~~---Ga~V~v~dr 198 (361)
T 1pjc_A 167 PGKVVILGGGVVGTEAAKMAVGL---GAQVQIFDI 198 (361)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT---TCEEEEEES
T ss_pred CCEEEEECCCHHHHHHHHHHHhC---CCEEEEEeC
Confidence 36899999999999999988764 236666654
No 335
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=42.58 E-value=17 Score=31.95 Aligned_cols=30 Identities=27% Similarity=0.312 Sum_probs=23.1
Q ss_pred eeEEEeCC-ChhhHHHHHHHhhCCCCCeEEEEEe
Q 025793 87 LKVAINGF-GRIGRNFLRCWHGRKDSPLDVVVVN 119 (248)
Q Consensus 87 vkV~INGF-GRIGRlvlR~~~~~~~~~l~iVaIN 119 (248)
-+|.|.|- |-||.++++++... ..+++++-
T Consensus 161 ~~VlV~Gasg~iG~~~~~~a~~~---Ga~Vi~~~ 191 (342)
T 4eye_A 161 ETVLVLGAAGGIGTAAIQIAKGM---GAKVIAVV 191 (342)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHT---TCEEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHc---CCEEEEEe
Confidence 47999998 99999999887654 24666664
No 336
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=42.42 E-value=28 Score=32.91 Aligned_cols=33 Identities=15% Similarity=0.224 Sum_probs=25.7
Q ss_pred eeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeC
Q 025793 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (248)
Q Consensus 86 ~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND 120 (248)
..+|.|.|.|.|||.+++.+... ...+|++++-
T Consensus 23 ~k~VlIiGAGgiG~aia~~L~~~--~g~~V~v~~R 55 (467)
T 2axq_A 23 GKNVLLLGSGFVAQPVIDTLAAN--DDINVTVACR 55 (467)
T ss_dssp CEEEEEECCSTTHHHHHHHHHTS--TTEEEEEEES
T ss_pred CCEEEEECChHHHHHHHHHHHhC--CCCeEEEEEC
Confidence 35899999999999999998754 2367666654
No 337
>1bgv_A Glutamate dehydrogenase; oxidoreductase; HET: GLU; 1.90A {Clostridium symbiosum} SCOP: c.2.1.7 c.58.1.1 PDB: 1hrd_A 1k89_A 1aup_A 2yfh_A
Probab=42.36 E-value=19 Score=34.43 Aligned_cols=99 Identities=15% Similarity=0.156 Sum_probs=58.5
Q ss_pred eeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeCC---------C-ChhhhhhhccccCcC-cccCceEEEecCCcEEEC
Q 025793 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS---------G-GVKNASHLLKYDSLL-GTFKADVKIVDNETISVD 155 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND~---------~-~~e~~ayLLkYDStH-Gkf~g~V~v~e~~~L~in 155 (248)
.+|+|-|||-.|..+++.+.+. ..++|+|-|. . +.+.+..|++|--.+ |....- .+ .+ +
T Consensus 231 ~~v~VqG~GnVG~~~a~~L~~~---GakvVavsD~~G~i~dp~Gi~d~edi~~l~~~k~~~~g~v~~y----~~-~~--~ 300 (449)
T 1bgv_A 231 KTVALAGFGNVAWGAAKKLAEL---GAKAVTLSGPDGYIYDPEGITTEEKINYMLEMRASGRNKVQDY----AD-KF--G 300 (449)
T ss_dssp CEEEECCSSHHHHHHHHHHHHH---TCEEEEEEETTEEEECTTCSCSHHHHHHHHHHHHHCCCCTHHH----HH-HH--T
T ss_pred CEEEEECCCHHHHHHHHHHHHC---CCEEEEEEeCCceEECCCcCCCHHHHHHHHHHHhccCCChhhc----cc-cc--C
Confidence 5899999999999999988764 4689988773 2 444555666653322 222110 00 01 1
Q ss_pred CeEEEEEecCCCCCCCCCCCcccEEecCc-ccccCchhhhHHHHcCCCE
Q 025793 156 GKLIKVVSNRDPLQLPWAELGIDIVIEGT-GVFVDGPGAGKHIQAGAKK 203 (248)
Q Consensus 156 Gk~I~v~~~~dP~~i~W~~~GidiVVE~T-G~F~~~e~a~~HL~~GAKK 203 (248)
.+.| . ++++ | +..+|+.+-|. +--.+.+.+......|+|=
T Consensus 301 a~~i---~---~~e~-~-~~~~Dil~P~A~~~~I~~~na~~l~a~g~ki 341 (449)
T 1bgv_A 301 VQFF---P---GEKP-W-GQKVDIIMPCATQNDVDLEQAKKIVANNVKY 341 (449)
T ss_dssp CEEE---E---TCCG-G-GSCCSEEECCSCTTCBCHHHHHHHHHTTCCE
T ss_pred CEEe---C---chhh-h-cCCcceeeccccccccchhhHHHHHhcCCeE
Confidence 2222 2 2333 8 57899999875 4445556665543347653
No 338
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=42.17 E-value=52 Score=30.71 Aligned_cols=30 Identities=27% Similarity=0.432 Sum_probs=23.2
Q ss_pred eeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEE
Q 025793 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVV 118 (248)
Q Consensus 86 ~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaI 118 (248)
..||+|.|.|.+|..++..+... .++|+.+
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~---G~~V~l~ 66 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARV---GISVVAV 66 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTT---TCEEEEE
T ss_pred CCEEEEECcCHHHHHHHHHHHhC---CCeEEEE
Confidence 35899999999999998877643 3676655
No 339
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=42.05 E-value=26 Score=31.35 Aligned_cols=30 Identities=23% Similarity=0.368 Sum_probs=25.6
Q ss_pred eeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEe
Q 025793 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIN 119 (248)
.+|+|-|-|.+||.+++++... .++++++.
T Consensus 13 ~~IlIlG~G~lg~~la~aa~~l---G~~viv~d 42 (377)
T 3orq_A 13 ATIGIIGGGQLGKMMAQSAQKM---GYKVVVLD 42 (377)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT---TCEEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHC---CCEEEEEE
Confidence 5899999999999999998764 47888884
No 340
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=42.05 E-value=21 Score=30.88 Aligned_cols=29 Identities=7% Similarity=-0.002 Sum_probs=22.2
Q ss_pred eeEEEeC-CChhhHHHHHHHhhCCCCCeEEEEE
Q 025793 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVV 118 (248)
Q Consensus 87 vkV~ING-FGRIGRlvlR~~~~~~~~~l~iVaI 118 (248)
-+|.|.| -|-||+.+++.+... ..+++++
T Consensus 142 ~~vlV~Ga~ggiG~~~~~~a~~~---G~~V~~~ 171 (327)
T 1qor_A 142 EQFLFHAAAGGVGLIACQWAKAL---GAKLIGT 171 (327)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHH---TCEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHc---CCEEEEE
Confidence 3799999 799999999887653 2466655
No 341
>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}
Probab=41.91 E-value=24 Score=33.40 Aligned_cols=32 Identities=25% Similarity=0.380 Sum_probs=27.7
Q ss_pred eeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeCC
Q 025793 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND~ 121 (248)
.+|+|-|||-.|+.+++.+.+. ..++|+|-|.
T Consensus 219 k~vaVqG~GnVG~~~a~~L~~~---GakVVavsD~ 250 (419)
T 3aoe_E 219 ARVVVQGLGQVGAAVALHAERL---GMRVVAVATS 250 (419)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT---TCEEEEEEET
T ss_pred CEEEEECcCHHHHHHHHHHHHC---CCEEEEEEcC
Confidence 5899999999999999998864 4788988876
No 342
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=41.49 E-value=25 Score=30.88 Aligned_cols=34 Identities=12% Similarity=0.093 Sum_probs=24.0
Q ss_pred eeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeCC
Q 025793 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (248)
Q Consensus 86 ~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND~ 121 (248)
..+|+|.|.|.+|+.+++.+.... .++-|.|-|.
T Consensus 135 ~~~igiIG~G~~g~~~a~~l~~~~--g~~~V~v~dr 168 (312)
T 2i99_A 135 SEVLCILGAGVQAYSHYEIFTEQF--SFKEVRIWNR 168 (312)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHC--CCSEEEEECS
T ss_pred CcEEEEECCcHHHHHHHHHHHHhC--CCcEEEEEcC
Confidence 358999999999999999876521 3533444444
No 343
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=41.38 E-value=34 Score=26.43 Aligned_cols=30 Identities=30% Similarity=0.261 Sum_probs=23.2
Q ss_pred eeEEEeCC-ChhhHHHHHHHhhCCCCCeEEEEEe
Q 025793 87 LKVAINGF-GRIGRNFLRCWHGRKDSPLDVVVVN 119 (248)
Q Consensus 87 vkV~INGF-GRIGRlvlR~~~~~~~~~l~iVaIN 119 (248)
++|.|-|- |.||+.+++.+.++ ..+++++.
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~---g~~V~~~~ 34 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQA---GYEVTVLV 34 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHT---TCEEEEEE
T ss_pred CEEEEEcCCcHHHHHHHHHHHHC---CCeEEEEE
Confidence 47889887 99999999998875 24666553
No 344
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=40.71 E-value=19 Score=31.49 Aligned_cols=28 Identities=25% Similarity=0.344 Sum_probs=22.2
Q ss_pred eeEEEeCCChhhHHHHHHHhhCCCCCeEEEEE
Q 025793 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVV 118 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaI 118 (248)
.+|.|-|+||+|+.+++.+.++ .. +++|
T Consensus 116 ~~viI~G~G~~g~~l~~~L~~~---g~-v~vi 143 (336)
T 1lnq_A 116 RHVVICGWSESTLECLRELRGS---EV-FVLA 143 (336)
T ss_dssp CEEEEESCCHHHHHHHTTGGGS---CE-EEEE
T ss_pred CCEEEECCcHHHHHHHHHHHhC---Cc-EEEE
Confidence 4799999999999999987653 35 5555
No 345
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=40.60 E-value=30 Score=29.13 Aligned_cols=32 Identities=19% Similarity=0.380 Sum_probs=24.1
Q ss_pred ceeeEEEeC-CChhhHHHHHHHhhCCCCCeEEEEEe
Q 025793 85 AKLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVN 119 (248)
Q Consensus 85 ~~vkV~ING-FGRIGRlvlR~~~~~~~~~l~iVaIN 119 (248)
|+++|.|-| -|.||+.+++.+.++ ..+|+++.
T Consensus 1 M~~~vlVtGatG~iG~~l~~~L~~~---g~~V~~~~ 33 (311)
T 3m2p_A 1 MSLKIAVTGGTGFLGQYVVESIKND---GNTPIILT 33 (311)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHT---TCEEEEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhC---CCEEEEEe
Confidence 346899998 699999999998875 24666554
No 346
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=40.31 E-value=29 Score=30.85 Aligned_cols=42 Identities=21% Similarity=0.226 Sum_probs=28.9
Q ss_pred eeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeCCCChhhhhhhccc
Q 025793 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKY 133 (248)
Q Consensus 86 ~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND~~~~e~~ayLLkY 133 (248)
..||+|.|.|.+|+.+++.+. . .++|++.|- +.+.+..++++
T Consensus 12 ~~~V~vIG~G~MG~~iA~~la-a---G~~V~v~d~--~~~~~~~~~~~ 53 (293)
T 1zej_A 12 HMKVFVIGAGLMGRGIAIAIA-S---KHEVVLQDV--SEKALEAAREQ 53 (293)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-T---TSEEEEECS--CHHHHHHHHHH
T ss_pred CCeEEEEeeCHHHHHHHHHHH-c---CCEEEEEEC--CHHHHHHHHHH
Confidence 468999999999999998876 4 367766653 23444444443
No 347
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=40.05 E-value=31 Score=28.90 Aligned_cols=30 Identities=27% Similarity=0.459 Sum_probs=23.7
Q ss_pred eeEEEeCC-ChhhHHHHHHHhhCCCCCeEEEEEe
Q 025793 87 LKVAINGF-GRIGRNFLRCWHGRKDSPLDVVVVN 119 (248)
Q Consensus 87 vkV~INGF-GRIGRlvlR~~~~~~~~~l~iVaIN 119 (248)
|||.|-|- |-||+.+++.+.++ ..+|+++.
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~---G~~V~~l~ 31 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNAR---GHEVTLVS 31 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT---TCEEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHC---CCEEEEEE
Confidence 57999987 99999999998875 35666653
No 348
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=39.40 E-value=71 Score=29.92 Aligned_cols=74 Identities=18% Similarity=0.292 Sum_probs=43.8
Q ss_pred eeEEEeCCChhhHH-HHHHHhhCCCCCeEEEEEeCCCChhhhhhhccccCcCcccCceEEEecCCcEEECCeEEEEEecC
Q 025793 87 LKVAINGFGRIGRN-FLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNR 165 (248)
Q Consensus 87 vkV~INGFGRIGRl-vlR~~~~~~~~~l~iVaIND~~~~e~~ayLLkYDStHGkf~g~V~v~e~~~L~inGk~I~v~~~~ 165 (248)
.+|.+.|.|.+|.. ++|.+..+ ..+| .+.|.........|-+. | |+++...
T Consensus 23 ~~v~viGiG~sG~s~~A~~l~~~---G~~V-~~~D~~~~~~~~~l~~~----------------------g--i~~~~g~ 74 (494)
T 4hv4_A 23 RHIHFVGIGGAGMGGIAEVLANE---GYQI-SGSDLAPNSVTQHLTAL----------------------G--AQIYFHH 74 (494)
T ss_dssp CEEEEETTTSTTHHHHHHHHHHT---TCEE-EEECSSCCHHHHHHHHT----------------------T--CEEESSC
T ss_pred CEEEEEEEcHhhHHHHHHHHHhC---CCeE-EEEECCCCHHHHHHHHC----------------------C--CEEECCC
Confidence 48999999999996 89998875 2454 45565222222222111 1 2233334
Q ss_pred CCCCCCCCCCcccEEecCcccccCchh
Q 025793 166 DPLQLPWAELGIDIVIEGTGVFVDGPG 192 (248)
Q Consensus 166 dP~~i~W~~~GidiVVE~TG~F~~~e~ 192 (248)
+|+++ .++|+||=+.|+-.+.+.
T Consensus 75 ~~~~~----~~~d~vV~Spgi~~~~p~ 97 (494)
T 4hv4_A 75 RPENV----LDASVVVVSTAISADNPE 97 (494)
T ss_dssp CGGGG----TTCSEEEECTTSCTTCHH
T ss_pred CHHHc----CCCCEEEECCCCCCCCHH
Confidence 55544 257888888888665543
No 349
>4fcc_A Glutamate dehydrogenase; protein complex, rossmann fold, metabolic role, NAD, NADP, oxidoreductase; 2.00A {Escherichia coli O157} PDB: 4fhn_X 2yfg_A 3sbo_A 2yfg_E
Probab=39.20 E-value=33 Score=32.90 Aligned_cols=100 Identities=21% Similarity=0.266 Sum_probs=56.8
Q ss_pred eeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeCC---------CChhhhhhhcccc-CcCcccCceEEEecCCcEEECC
Q 025793 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS---------GGVKNASHLLKYD-SLLGTFKADVKIVDNETISVDG 156 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND~---------~~~e~~ayLLkYD-StHGkf~g~V~v~e~~~L~inG 156 (248)
.+|+|-|||-.|..+++.+.+. .-++|+|-|. .|.+.+..|++.- +..|+...-. ++.+..
T Consensus 236 k~vaVQG~GnVG~~aa~~L~e~---GakvVavsD~~G~i~d~~Gid~e~l~~l~e~k~~~~g~v~~~~--~~~g~~---- 306 (450)
T 4fcc_A 236 MRVSVSGSGNVAQYAIEKAMEF---GARVITASDSSGTVVDESGFTKEKLARLIEIKSSRDGRVADYA--KEFGLV---- 306 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT---TCEEEEEEETTEEEECTTCCCHHHHHHHHHHHTSTTCCHHHHH--HHHTCE----
T ss_pred CEEEEeCCChHHHHHHHHHHhc---CCeEEEEecCCceEEeCCCCCHHHHHHHHHHhcccCCcccccc--ccCCcE----
Confidence 5899999999999999998874 3578877653 3667777666432 2222211000 011111
Q ss_pred eEEEEEecCCCCCCCCCCCcccEEecC-cccccCchhhhHHHHcCCCEE
Q 025793 157 KLIKVVSNRDPLQLPWAELGIDIVIEG-TGVFVDGPGAGKHIQAGAKKV 204 (248)
Q Consensus 157 k~I~v~~~~dP~~i~W~~~GidiVVE~-TG~F~~~e~a~~HL~~GAKKV 204 (248)
.+. +++ .| +..+|+.+=| +|--.+.+.+..-...|+|-|
T Consensus 307 ----~~~---~~~-i~-~~~~DI~iPcAl~~~I~~~~a~~L~a~g~k~I 346 (450)
T 4fcc_A 307 ----YLE---GQQ-PW-SVPVDIALPCATQNELDVDAAHQLIANGVKAV 346 (450)
T ss_dssp ----EEE---TCC-GG-GSCCSEEEECSCTTCBCHHHHHHHHHTTCCEE
T ss_pred ----Eec---Ccc-cc-cCCccEEeeccccccccHHHHHHHHhcCceEE
Confidence 111 222 36 3578888766 555556666554333466544
No 350
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=38.76 E-value=25 Score=33.03 Aligned_cols=34 Identities=24% Similarity=0.207 Sum_probs=25.0
Q ss_pred ceeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEe
Q 025793 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (248)
Q Consensus 85 ~~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIN 119 (248)
+++||+|.|.|.+|..++..+... +...+|+.++
T Consensus 8 ~~mkI~VIG~G~vG~~~A~~La~~-g~g~~V~~~D 41 (481)
T 2o3j_A 8 KVSKVVCVGAGYVGGPTCAMIAHK-CPHITVTVVD 41 (481)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHHH-CTTSEEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhc-CCCCEEEEEE
Confidence 346999999999999988876643 1235777664
No 351
>3h2z_A Mannitol-1-phosphate 5-dehydrogenase; PSI- protein structure initiative, structural genomics, midwest for structural genomics (MCSG); 1.90A {Shigella flexneri 2a str}
Probab=38.55 E-value=17 Score=33.84 Aligned_cols=30 Identities=23% Similarity=0.377 Sum_probs=21.2
Q ss_pred eeEEEeCCChhhHHHHHHHhhCCCCCeEEEEE
Q 025793 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVV 118 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaI 118 (248)
||+...|.|+|||-+.=..+... ..+++.+
T Consensus 1 mkavhfGaGniGRGfig~~l~~~--g~~v~f~ 30 (382)
T 3h2z_A 1 MKALHFGAGNIGRGFIGKLLADA--GIQLTFA 30 (382)
T ss_dssp CEEEEECCSHHHHHTHHHHHHHT--TCEEEEE
T ss_pred CcEEEECCCccchhhHHHHHHHc--CCeEEEE
Confidence 58999999999998775555443 3555543
No 352
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=35.74 E-value=32 Score=30.17 Aligned_cols=30 Identities=17% Similarity=0.174 Sum_probs=22.2
Q ss_pred eeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEe
Q 025793 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIN 119 (248)
+||+|.|.|.||..++..+... + .+|..+.
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~~-g--~~V~~~~ 33 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLALA-G--EAINVLA 33 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHHT-T--CCEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHHC-C--CEEEEEE
Confidence 5899999999999998877653 2 3444443
No 353
>3bbn_K Ribosomal protein S11; small ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea} SCOP: i.1.1.1
Probab=35.02 E-value=92 Score=25.30 Aligned_cols=65 Identities=23% Similarity=0.281 Sum_probs=39.1
Q ss_pred ccccccccCCcCHHHHHHhhccccccCCCCCccccccceeeEEEeCCChhhH-HHHHHHhhCCCCCeEEEEEeCCC
Q 025793 48 GATYATGARDASFFDAVTAQLTPKVAAGSVPVKKETVAKLKVAINGFGRIGR-NFLRCWHGRKDSPLDVVVVNDSG 122 (248)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vkV~INGFGRIGR-lvlR~~~~~~~~~l~iVaIND~~ 122 (248)
.+.|+.......+..+++++...... .. . -...+.|-|.|||. || .++|++.. ..++|.-|-|..
T Consensus 60 ~~GfKg~rksTp~AA~~aa~~~~~~a---~e-~--Gi~~v~V~vkG~G~-GReaairaL~~---~Gl~I~~I~DvT 125 (140)
T 3bbn_K 60 TCGFRGTKRGTPFAAQTAAGNAIRTV---VE-Q--GMQRAEVMIKGPGL-GRDAALRAIRR---SGILLSFVRDVT 125 (140)
T ss_dssp TSSCCTTSCSSHHHHHHHHTSGGGTS---TT-T--CCCEEEEEEESCST-TSSHHHHHHHT---TTCEEEEEEECC
T ss_pred ceeEcccccCCHHHHHHHHHHHHHHH---HH-h--CCeEEEEEEECCCC-cHHHHHHHHHH---CCCEEEEEEEcC
Confidence 45675554455555555544433211 01 1 11358899999997 65 67787764 368999999863
No 354
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=34.10 E-value=24 Score=31.42 Aligned_cols=23 Identities=22% Similarity=0.258 Sum_probs=19.2
Q ss_pred ceeeEEEeCCChhhHHHHHHHhh
Q 025793 85 AKLKVAINGFGRIGRNFLRCWHG 107 (248)
Q Consensus 85 ~~vkV~INGFGRIGRlvlR~~~~ 107 (248)
|++||+|.|.|.+|..+++.+..
T Consensus 20 ~~~kI~iIGaG~mG~alA~~L~~ 42 (375)
T 1yj8_A 20 GPLKISILGSGNWASAISKVVGT 42 (375)
T ss_dssp SCBCEEEECCSHHHHHHHHHHHH
T ss_pred CCCEEEEECcCHHHHHHHHHHHH
Confidence 34689999999999999887654
No 355
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=33.78 E-value=41 Score=31.72 Aligned_cols=32 Identities=22% Similarity=0.340 Sum_probs=24.5
Q ss_pred ceeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEe
Q 025793 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (248)
Q Consensus 85 ~~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIN 119 (248)
..+||+|.|.|.+|..++.++... ..+|+.++
T Consensus 7 ~~~~I~VIG~G~vG~~lA~~la~~---G~~V~~~d 38 (478)
T 2y0c_A 7 GSMNLTIIGSGSVGLVTGACLADI---GHDVFCLD 38 (478)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT---TCEEEEEC
T ss_pred CCceEEEECcCHHHHHHHHHHHhC---CCEEEEEE
Confidence 457999999999999988877653 35666663
No 356
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=33.50 E-value=41 Score=26.69 Aligned_cols=30 Identities=27% Similarity=0.350 Sum_probs=23.6
Q ss_pred eeEEEeC-CChhhHHHHHHHhhCCCCCeEEEEEe
Q 025793 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVN 119 (248)
Q Consensus 87 vkV~ING-FGRIGRlvlR~~~~~~~~~l~iVaIN 119 (248)
++|.|-| -|.||+.+++.+.++ ..+|+++.
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~---g~~V~~~~ 35 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNR---GFEVTAVV 35 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTT---TCEEEEEC
T ss_pred CEEEEEcCCchHHHHHHHHHHHC---CCEEEEEE
Confidence 5899999 699999999998865 25666653
No 357
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=33.44 E-value=32 Score=30.06 Aligned_cols=90 Identities=9% Similarity=0.068 Sum_probs=49.4
Q ss_pred eEEEe-CCChhhHHHHHHHhhCCCCCeEEEEEeCCCChhhhhhhccccCcCcccCceEEEecCCcEEECCeEEEEEecCC
Q 025793 88 KVAIN-GFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRD 166 (248)
Q Consensus 88 kV~IN-GFGRIGRlvlR~~~~~~~~~l~iVaIND~~~~e~~ayLLkYDStHGkf~g~V~v~e~~~L~inGk~I~v~~~~d 166 (248)
.|.|+ |-|-||...++++... ..+++++-.. .+.+..+.++ | .+..+ ..++
T Consensus 167 ~vli~gg~g~vG~~a~qla~~~---Ga~Vi~~~~~--~~~~~~~~~~----G---a~~~~----------------~~~~ 218 (349)
T 3pi7_A 167 AFVMTAGASQLCKLIIGLAKEE---GFRPIVTVRR--DEQIALLKDI----G---AAHVL----------------NEKA 218 (349)
T ss_dssp EEEESSTTSHHHHHHHHHHHHH---TCEEEEEESC--GGGHHHHHHH----T---CSEEE----------------ETTS
T ss_pred EEEEeCCCcHHHHHHHHHHHHC---CCEEEEEeCC--HHHHHHHHHc----C---CCEEE----------------ECCc
Confidence 46676 8999999988887653 2477766422 2333333322 2 11111 1111
Q ss_pred CCCCCCCC--------CcccEEecCcccccCchhhhHHHHcCCCEEEEcCC
Q 025793 167 PLQLPWAE--------LGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (248)
Q Consensus 167 P~~i~W~~--------~GidiVVE~TG~F~~~e~a~~HL~~GAKKVIISAP 209 (248)
-+|.+ .|+|+|+||+|.-.. +.+-..|+.|-+=|++..+
T Consensus 219 ---~~~~~~v~~~~~~~g~D~vid~~g~~~~-~~~~~~l~~~G~iv~~G~~ 265 (349)
T 3pi7_A 219 ---PDFEATLREVMKAEQPRIFLDAVTGPLA-SAIFNAMPKRARWIIYGRL 265 (349)
T ss_dssp ---TTHHHHHHHHHHHHCCCEEEESSCHHHH-HHHHHHSCTTCEEEECCCS
T ss_pred ---HHHHHHHHHHhcCCCCcEEEECCCChhH-HHHHhhhcCCCEEEEEecc
Confidence 12211 489999999996432 4445566666555555433
No 358
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=33.36 E-value=29 Score=30.19 Aligned_cols=22 Identities=32% Similarity=0.394 Sum_probs=18.9
Q ss_pred eeeEEEeCCChhhHHHHHHHhh
Q 025793 86 KLKVAINGFGRIGRNFLRCWHG 107 (248)
Q Consensus 86 ~vkV~INGFGRIGRlvlR~~~~ 107 (248)
++||+|.|.|.+|..+++.+..
T Consensus 8 ~mkI~iIG~G~mG~~~a~~l~~ 29 (354)
T 1x0v_A 8 SKKVCIVGSGNWGSAIAKIVGG 29 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHh
Confidence 3689999999999999887754
No 359
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=32.40 E-value=51 Score=26.25 Aligned_cols=29 Identities=14% Similarity=0.234 Sum_probs=21.9
Q ss_pred eEEEeC-CChhhHHHHHHHh-hCCCCCeEEEEEe
Q 025793 88 KVAING-FGRIGRNFLRCWH-GRKDSPLDVVVVN 119 (248)
Q Consensus 88 kV~ING-FGRIGRlvlR~~~-~~~~~~l~iVaIN 119 (248)
+|.|-| -|.||+.+++.+. .+ ..+|+++.
T Consensus 7 ~vlVtGasg~iG~~~~~~l~~~~---g~~V~~~~ 37 (221)
T 3r6d_A 7 YITILGAAGQIAQXLTATLLTYT---DMHITLYG 37 (221)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHC---CCEEEEEE
T ss_pred EEEEEeCCcHHHHHHHHHHHhcC---CceEEEEe
Confidence 489999 6999999999888 53 34666553
No 360
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=31.94 E-value=49 Score=28.95 Aligned_cols=32 Identities=13% Similarity=0.158 Sum_probs=25.2
Q ss_pred eeEEEeCCChhhHHHHHHHhhCCCCCe-EEEEEeCC
Q 025793 87 LKVAINGFGRIGRNFLRCWHGRKDSPL-DVVVVNDS 121 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~~~~~l-~iVaIND~ 121 (248)
.+|.|-|.|.+||.+++.+... .. +|+++|-.
T Consensus 142 ~~vlVlGaGg~g~aia~~L~~~---G~~~V~v~nR~ 174 (297)
T 2egg_A 142 KRILVIGAGGGARGIYFSLLST---AAERIDMANRT 174 (297)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT---TCSEEEEECSS
T ss_pred CEEEEECcHHHHHHHHHHHHHC---CCCEEEEEeCC
Confidence 4799999999999999988754 34 66666654
No 361
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=31.76 E-value=54 Score=26.39 Aligned_cols=31 Identities=19% Similarity=0.368 Sum_probs=23.8
Q ss_pred eeeEEEeCC-ChhhHHHHHHHhhCCCCCeEEEEEe
Q 025793 86 KLKVAINGF-GRIGRNFLRCWHGRKDSPLDVVVVN 119 (248)
Q Consensus 86 ~vkV~INGF-GRIGRlvlR~~~~~~~~~l~iVaIN 119 (248)
.++|.|-|- |.||+.++|.+.++ ..+|+++-
T Consensus 21 ~~~ilVtGatG~iG~~l~~~L~~~---G~~V~~~~ 52 (236)
T 3e8x_A 21 GMRVLVVGANGKVARYLLSELKNK---GHEPVAMV 52 (236)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT---TCEEEEEE
T ss_pred CCeEEEECCCChHHHHHHHHHHhC---CCeEEEEE
Confidence 357999997 99999999998875 24665553
No 362
>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}
Probab=31.63 E-value=34 Score=30.51 Aligned_cols=39 Identities=10% Similarity=0.118 Sum_probs=25.5
Q ss_pred eEEEe--CCChhhHHHHHHHhhCCCCCeEEEEEeCCCChhhhhhhc
Q 025793 88 KVAIN--GFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLL 131 (248)
Q Consensus 88 kV~IN--GFGRIGRlvlR~~~~~~~~~l~iVaIND~~~~e~~ayLL 131 (248)
+|.|. |-|-+|.+.+.++... ..+++++-. +.+.+.++.
T Consensus 173 ~vlV~gag~G~vG~~a~q~a~~~---Ga~Vi~~~~--~~~~~~~~~ 213 (379)
T 3iup_A 173 SALVHTAAASNLGQMLNQICLKD---GIKLVNIVR--KQEQADLLK 213 (379)
T ss_dssp SCEEESSTTSHHHHHHHHHHHHH---TCCEEEEES--SHHHHHHHH
T ss_pred EEEEECCCCCHHHHHHHHHHHHC---CCEEEEEEC--CHHHHHHHH
Confidence 58888 8999999888877543 246666632 334454443
No 363
>3r8n_K 30S ribosomal protein S11; protein biosynthesis, RNA, tRNA, transfer RNA, 16S ribosomal subunit, RRF; 3.00A {Escherichia coli} PDB: 2ykr_K 3fih_K* 3iy8_K 3j18_K* 2wwl_K 3oar_K 3oaq_K 3ofb_K 3ofa_K 3ofp_K 3ofx_K 3ofy_K 3ofo_K 3r8o_K 4a2i_K 4gd1_K 4gd2_K 3i1m_K 1vs7_K* 3e1a_C ...
Probab=31.15 E-value=76 Score=24.88 Aligned_cols=34 Identities=24% Similarity=0.472 Sum_probs=25.9
Q ss_pred ceeeEEEeCCChhhH-HHHHHHhhCCCCCeEEEEEeCCC
Q 025793 85 AKLKVAINGFGRIGR-NFLRCWHGRKDSPLDVVVVNDSG 122 (248)
Q Consensus 85 ~~vkV~INGFGRIGR-lvlR~~~~~~~~~l~iVaIND~~ 122 (248)
..+.|-|.|||. || .++|++.. ..++|+-|-|..
T Consensus 68 ~~v~v~vkG~G~-Gr~~airaL~~---~Gl~I~~I~DvT 102 (117)
T 3r8n_K 68 KNLEVMVKGPGP-GRESTIRALNA---AGFRITNITDVT 102 (117)
T ss_dssp CEEEEEEECSSS-STTHHHHHHHH---TTCEEEEEEECC
T ss_pred cEEEEEEeCCCc-cHHHHHHHHHh---CCCEEEEEEEeC
Confidence 358899999997 66 57787753 358999998863
No 364
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=30.68 E-value=32 Score=30.08 Aligned_cols=30 Identities=13% Similarity=0.173 Sum_probs=22.0
Q ss_pred eeEEEeCCC-hhhHHHHHHHhhCCCCCeEEEEE
Q 025793 87 LKVAINGFG-RIGRNFLRCWHGRKDSPLDVVVV 118 (248)
Q Consensus 87 vkV~INGFG-RIGRlvlR~~~~~~~~~l~iVaI 118 (248)
-+|.|.|-| .||+.+++++.... ..+++++
T Consensus 172 ~~vlV~Gagg~iG~~~~~~a~~~~--Ga~Vi~~ 202 (347)
T 1jvb_A 172 KTLLVVGAGGGLGTMAVQIAKAVS--GATIIGV 202 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHT--CCEEEEE
T ss_pred CEEEEECCCccHHHHHHHHHHHcC--CCeEEEE
Confidence 369999999 99999988876531 2466655
No 365
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=30.67 E-value=53 Score=28.11 Aligned_cols=29 Identities=21% Similarity=0.266 Sum_probs=22.4
Q ss_pred eeEEEeCCChhhHHHHHHHhhCCCCCeEEEEE
Q 025793 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVV 118 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaI 118 (248)
+||+|.|-|..|-.++..+..+ .++++++
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~---G~~v~v~ 30 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKH---GIKVTIY 30 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT---TCEEEEE
T ss_pred CEEEEECcCHHHHHHHHHHHhC---CCCEEEE
Confidence 6899999999998888776543 4666655
No 366
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=30.49 E-value=46 Score=29.66 Aligned_cols=29 Identities=24% Similarity=0.318 Sum_probs=22.6
Q ss_pred eeEEEeCCChhhHHHHHHHhhCCCCCeEEEEE
Q 025793 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVV 118 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaI 118 (248)
.||+|.|.|.||+.++..+... .++|+..
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~~---G~~V~l~ 35 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFASG---GFRVKLY 35 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT---TCCEEEE
T ss_pred ceEEEEeeCHHHHHHHHHHHHC---CCEEEEE
Confidence 5899999999999999877653 3565554
No 367
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=30.38 E-value=56 Score=27.31 Aligned_cols=30 Identities=20% Similarity=0.337 Sum_probs=23.0
Q ss_pred eeEEEeCC-ChhhHHHHHHHhhCCCCCeEEEEEe
Q 025793 87 LKVAINGF-GRIGRNFLRCWHGRKDSPLDVVVVN 119 (248)
Q Consensus 87 vkV~INGF-GRIGRlvlR~~~~~~~~~l~iVaIN 119 (248)
++|.|-|- |.||+.+++.+.++ ..+|+++.
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~---g~~V~~~~ 33 (315)
T 2ydy_A 3 RRVLVTGATGLLGRAVHKEFQQN---NWHAVGCG 33 (315)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTT---TCEEEEEC
T ss_pred CeEEEECCCcHHHHHHHHHHHhC---CCeEEEEc
Confidence 57889886 99999999988864 25666553
No 368
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=30.30 E-value=30 Score=31.62 Aligned_cols=29 Identities=24% Similarity=0.366 Sum_probs=22.4
Q ss_pred eeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEe
Q 025793 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIN 119 (248)
+||+|.|.|.+|..++..+.. ..+|++++
T Consensus 1 MkI~VIG~G~vG~~~A~~La~----G~~V~~~d 29 (402)
T 1dlj_A 1 MKIAVAGSGYVGLSLGVLLSL----QNEVTIVD 29 (402)
T ss_dssp CEEEEECCSHHHHHHHHHHTT----TSEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHhC----CCEEEEEE
Confidence 479999999999998887653 25666663
No 369
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=30.29 E-value=50 Score=27.43 Aligned_cols=32 Identities=28% Similarity=0.392 Sum_probs=24.2
Q ss_pred ceeeEEEeCC-ChhhHHHHHHHhhCCCCCeEEEEEe
Q 025793 85 AKLKVAINGF-GRIGRNFLRCWHGRKDSPLDVVVVN 119 (248)
Q Consensus 85 ~~vkV~INGF-GRIGRlvlR~~~~~~~~~l~iVaIN 119 (248)
++.+|.|-|- |.||+.+++.+.++ ..+|+++.
T Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~---g~~V~~~~ 38 (321)
T 3vps_A 6 LKHRILITGGAGFIGGHLARALVAS---GEEVTVLD 38 (321)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHT---TCCEEEEC
T ss_pred CCCeEEEECCCChHHHHHHHHHHHC---CCEEEEEe
Confidence 3468999997 99999999998875 24565553
No 370
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=30.02 E-value=66 Score=26.07 Aligned_cols=32 Identities=19% Similarity=0.288 Sum_probs=23.6
Q ss_pred eeeEEEeC-CChhhHHHHHHHhhCCCCCeEEEEEe
Q 025793 86 KLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVN 119 (248)
Q Consensus 86 ~vkV~ING-FGRIGRlvlR~~~~~~~~~l~iVaIN 119 (248)
+.+|.|-| -|.||+.+++.+.++. ..+|+++.
T Consensus 23 mk~vlVtGatG~iG~~l~~~L~~~G--~~~V~~~~ 55 (236)
T 3qvo_A 23 MKNVLILGAGGQIARHVINQLADKQ--TIKQTLFA 55 (236)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCT--TEEEEEEE
T ss_pred ccEEEEEeCCcHHHHHHHHHHHhCC--CceEEEEE
Confidence 45789998 7999999999887642 25665553
No 371
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=29.75 E-value=53 Score=28.34 Aligned_cols=98 Identities=20% Similarity=0.208 Sum_probs=50.8
Q ss_pred eEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeCCCChhhhhhhccccCcCcccCceEEEecCCcEEECCeEEEEEecCCC
Q 025793 88 KVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDP 167 (248)
Q Consensus 88 kV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND~~~~e~~ayLLkYDStHGkf~g~V~v~e~~~L~inGk~I~v~~~~dP 167 (248)
+|.|.|-|-+|-+.+..+... ...+|+++-- +.+.+..+.++ | .+..++ - .+.|+
T Consensus 166 ~VlV~GaG~~g~~a~~~a~~~--~g~~Vi~~~~--~~~r~~~~~~~----G---a~~~i~--------~------~~~~~ 220 (348)
T 4eez_A 166 WQVIFGAGGLGNLAIQYAKNV--FGAKVIAVDI--NQDKLNLAKKI----G---ADVTIN--------S------GDVNP 220 (348)
T ss_dssp EEEEECCSHHHHHHHHHHHHT--SCCEEEEEES--CHHHHHHHHHT----T---CSEEEE--------C-------CCCH
T ss_pred EEEEEcCCCccHHHHHHHHHh--CCCEEEEEEC--cHHHhhhhhhc----C---CeEEEe--------C------CCCCH
Confidence 699999999998877765433 2357777632 22333332222 1 111111 0 00011
Q ss_pred C-CC-C-CCCCcccEEecCcccccCchhhhHHHHcCCCEEEEcCCC
Q 025793 168 L-QL-P-WAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPA 210 (248)
Q Consensus 168 ~-~i-~-W~~~GidiVVE~TG~F~~~e~a~~HL~~GAKKVIISAPs 210 (248)
. ++ . -...|+|+++||+|.-.+.+.+-..++.|-+-|++..|.
T Consensus 221 ~~~v~~~t~g~g~d~~~~~~~~~~~~~~~~~~l~~~G~~v~~g~~~ 266 (348)
T 4eez_A 221 VDEIKKITGGLGVQSAIVCAVARIAFEQAVASLKPMGKMVAVAVPN 266 (348)
T ss_dssp HHHHHHHTTSSCEEEEEECCSCHHHHHHHHHTEEEEEEEEECCCCS
T ss_pred HHHhhhhcCCCCceEEEEeccCcchhheeheeecCCceEEEEeccC
Confidence 0 00 0 123589999999987544444445555555545554443
No 372
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=29.30 E-value=62 Score=28.42 Aligned_cols=33 Identities=24% Similarity=0.327 Sum_probs=23.7
Q ss_pred eeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeCC
Q 025793 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (248)
Q Consensus 86 ~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND~ 121 (248)
++||+|-|-|.+|..++-.+.... .++ |++-|.
T Consensus 2 ~~kI~VIGaG~vG~~~a~~la~~g--~~~-v~L~Di 34 (309)
T 1ur5_A 2 RKKISIIGAGFVGSTTAHWLAAKE--LGD-IVLLDI 34 (309)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT--CSE-EEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC--CCe-EEEEeC
Confidence 469999999999998877665432 236 555564
No 373
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=28.93 E-value=54 Score=32.19 Aligned_cols=35 Identities=14% Similarity=0.182 Sum_probs=25.2
Q ss_pred eeEEEeCCChhhHHHHHHHhhC---CCCCeEEEEEeCC
Q 025793 87 LKVAINGFGRIGRNFLRCWHGR---KDSPLDVVVVNDS 121 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~---~~~~l~iVaIND~ 121 (248)
.||+|.|+|.||+.+++.+... .+..+++++-++.
T Consensus 55 KkIgIIGlGsMG~AmA~nLr~s~~~~g~G~~ViVg~r~ 92 (525)
T 3fr7_A 55 KQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKIGLRK 92 (525)
T ss_dssp SEEEEECCTTHHHHHHHHHHHHHHHTTCCCEEEEEECT
T ss_pred CEEEEEeEhHHHHHHHHHHHhcccccCCCCEEEEEeCC
Confidence 4799999999999999887653 1124677655544
No 374
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=28.85 E-value=41 Score=30.32 Aligned_cols=22 Identities=27% Similarity=0.279 Sum_probs=19.3
Q ss_pred eeeEEEeCCChhhHHHHHHHhh
Q 025793 86 KLKVAINGFGRIGRNFLRCWHG 107 (248)
Q Consensus 86 ~vkV~INGFGRIGRlvlR~~~~ 107 (248)
++||+|.|.|.+|..+++.+..
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~ 50 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLAR 50 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHT
T ss_pred CCeEEEECccHHHHHHHHHHHH
Confidence 4689999999999999988764
No 375
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=28.80 E-value=1.1e+02 Score=27.99 Aligned_cols=31 Identities=32% Similarity=0.282 Sum_probs=23.8
Q ss_pred eeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeCC
Q 025793 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND~ 121 (248)
.||.|.|.|++|..++|.+..+ ..+|. +.|.
T Consensus 10 k~v~viG~G~sG~s~A~~l~~~---G~~V~-~~D~ 40 (451)
T 3lk7_A 10 KKVLVLGLARSGEAAARLLAKL---GAIVT-VNDG 40 (451)
T ss_dssp CEEEEECCTTTHHHHHHHHHHT---TCEEE-EEES
T ss_pred CEEEEEeeCHHHHHHHHHHHhC---CCEEE-EEeC
Confidence 4899999999999999998875 24543 4454
No 376
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=28.58 E-value=61 Score=27.51 Aligned_cols=35 Identities=17% Similarity=0.329 Sum_probs=27.4
Q ss_pred eeeEEEeCC-ChhhHHHHHHHhhCCCCCeEEEEEeCC
Q 025793 86 KLKVAINGF-GRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (248)
Q Consensus 86 ~vkV~INGF-GRIGRlvlR~~~~~~~~~l~iVaIND~ 121 (248)
.++|.|-|- |.||+.+++.++++ +..++++++...
T Consensus 24 ~~~vlVtGatG~iG~~l~~~L~~~-g~~~~v~~~~~~ 59 (346)
T 4egb_A 24 AMNILVTGGAGFIGSNFVHYMLQS-YETYKIINFDAL 59 (346)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHH-CTTEEEEEEECC
T ss_pred CCeEEEECCccHHHHHHHHHHHhh-CCCcEEEEEecc
Confidence 368999997 99999999988864 235888887653
No 377
>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*
Probab=28.54 E-value=69 Score=28.06 Aligned_cols=33 Identities=21% Similarity=0.355 Sum_probs=26.3
Q ss_pred ceeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeC
Q 025793 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (248)
Q Consensus 85 ~~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND 120 (248)
++.||.|-|-|.+||.+++++... .++++++..
T Consensus 10 ~~~~ili~g~g~~~~~~~~a~~~~---G~~v~~~~~ 42 (391)
T 1kjq_A 10 AATRVMLLGSGELGKEVAIECQRL---GVEVIAVDR 42 (391)
T ss_dssp TCCEEEEESCSHHHHHHHHHHHTT---TCEEEEEES
T ss_pred CCCEEEEECCCHHHHHHHHHHHHc---CCEEEEEEC
Confidence 446899999999999999988653 467777764
No 378
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*
Probab=28.52 E-value=51 Score=29.34 Aligned_cols=89 Identities=16% Similarity=0.092 Sum_probs=47.9
Q ss_pred eEEEe-CC-ChhhHHHHHHHhhCCCCCeEEEEEeCCCChhhhhhhccccCcCcccCceEEEecCCcEEECCeEEEEEecC
Q 025793 88 KVAIN-GF-GRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNR 165 (248)
Q Consensus 88 kV~IN-GF-GRIGRlvlR~~~~~~~~~l~iVaIND~~~~e~~ayLLkYDStHGkf~g~V~v~e~~~L~inGk~I~v~~~~ 165 (248)
.++|. |+ |+.|+.+++.+.+. .+++|...+|... | .+ +.| ++++.
T Consensus 15 siaVV~Gasg~~G~~~~~~l~~~---G~~~v~~VnP~~~-------------g---~~----------i~G--~~vy~-- 61 (305)
T 2fp4_A 15 TKVICQGFTGKQGTFHSQQALEY---GTNLVGGTTPGKG-------------G---KT----------HLG--LPVFN-- 61 (305)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHH---TCEEEEEECTTCT-------------T---CE----------ETT--EEEES--
T ss_pred cEEEEECCCCCHHHHHHHHHHHC---CCcEEEEeCCCcC-------------c---ce----------ECC--eeeec--
Confidence 35555 99 99999999877653 3566633334110 0 00 223 22221
Q ss_pred CCCCCCCCCCcccEEecCcccccCchhhhHHHHcCCCEEEEcCCC
Q 025793 166 DPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPA 210 (248)
Q Consensus 166 dP~~i~W~~~GidiVVE~TG~F~~~e~a~~HL~~GAKKVIISAPs 210 (248)
+.++++- +..+|+++-++-.-.-.+-+..-++.|+|.+|+-+|+
T Consensus 62 sl~el~~-~~~vD~avI~vP~~~~~~~~~e~i~~Gi~~iv~~t~G 105 (305)
T 2fp4_A 62 TVKEAKE-QTGATASVIYVPPPFAAAAINEAIDAEVPLVVCITEG 105 (305)
T ss_dssp SHHHHHH-HHCCCEEEECCCHHHHHHHHHHHHHTTCSEEEECCCC
T ss_pred hHHHhhh-cCCCCEEEEecCHHHHHHHHHHHHHCCCCEEEEECCC
Confidence 1222221 2267888766655444455555666788886655654
No 379
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=28.24 E-value=47 Score=30.06 Aligned_cols=32 Identities=25% Similarity=0.379 Sum_probs=26.5
Q ss_pred eeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeC
Q 025793 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (248)
Q Consensus 86 ~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND 120 (248)
+.||+|-|=|.+||.+++++... .++++++.+
T Consensus 24 ~~~I~ilGgG~lg~~l~~aa~~l---G~~v~~~d~ 55 (403)
T 3k5i_A 24 SRKVGVLGGGQLGRMLVESANRL---NIQVNVLDA 55 (403)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH---TCEEEEEES
T ss_pred CCEEEEECCCHHHHHHHHHHHHC---CCEEEEEEC
Confidence 46899999999999999998753 478888763
No 380
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=28.23 E-value=53 Score=27.79 Aligned_cols=32 Identities=9% Similarity=0.153 Sum_probs=25.0
Q ss_pred ceeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeC
Q 025793 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (248)
Q Consensus 85 ~~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND 120 (248)
|++||+|-|-| .|+.+++++..+ .++++++..
T Consensus 1 m~m~Ililg~g-~~~~l~~a~~~~---G~~v~~~~~ 32 (334)
T 2r85_A 1 MKVRIATYASH-SALQILKGAKDE---GFETIAFGS 32 (334)
T ss_dssp CCSEEEEESST-THHHHHHHHHHT---TCCEEEESC
T ss_pred CceEEEEECCh-hHHHHHHHHHhC---CCEEEEEEC
Confidence 45789999999 999999988764 477777643
No 381
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=27.36 E-value=28 Score=31.51 Aligned_cols=100 Identities=17% Similarity=0.152 Sum_probs=49.7
Q ss_pred eeeEEEeCCChhhHHHHHHHhhCCCCCe-EEEEEeC-CCChhhhhh--hccccCcCcccCceEEEecCCcEEEC-CeEEE
Q 025793 86 KLKVAINGFGRIGRNFLRCWHGRKDSPL-DVVVVND-SGGVKNASH--LLKYDSLLGTFKADVKIVDNETISVD-GKLIK 160 (248)
Q Consensus 86 ~vkV~INGFGRIGRlvlR~~~~~~~~~l-~iVaIND-~~~~e~~ay--LLkYDStHGkf~g~V~v~e~~~L~in-Gk~I~ 160 (248)
.-+|.|.|.|.+|..++..+... .+ ++..|.+ ..+...+.. |+..+. -|+.+.++-.+ .--.+| .-.|.
T Consensus 118 ~~~VlvvG~GglGs~va~~La~a---Gvg~i~lvD~D~Ve~sNL~Rq~l~~~~d-iG~~Ka~~~~~--~l~~~np~v~v~ 191 (353)
T 3h5n_A 118 NAKVVILGCGGIGNHVSVILATS---GIGEIILIDNDQIENTNLTRQVLFSEDD-VGKNKTEVIKR--ELLKRNSEISVS 191 (353)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHH---TCSEEEEEECCBCCGGGGGTCTTCCGGG-TTSBHHHHHHH--HHHHHCTTSEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhC---CCCeEEEECCCcCcccccccccCCChHH-CCChHHHHHHH--HHHHHCCCCeEE
Confidence 45899999999999998876542 24 3333332 233333332 223333 36554332211 000022 12333
Q ss_pred EEecC-CCCC-CCCCCCcccEEecCccccc-Cchh
Q 025793 161 VVSNR-DPLQ-LPWAELGIDIVIEGTGVFV-DGPG 192 (248)
Q Consensus 161 v~~~~-dP~~-i~W~~~GidiVVE~TG~F~-~~e~ 192 (248)
.+..+ ++.+ +.- -.+.|+||+||.-|. ++..
T Consensus 192 ~~~~~i~~~~~~~~-~~~~DlVvd~~Dn~~~~r~~ 225 (353)
T 3h5n_A 192 EIALNINDYTDLHK-VPEADIWVVSADHPFNLINW 225 (353)
T ss_dssp EEECCCCSGGGGGG-SCCCSEEEECCCCSTTHHHH
T ss_pred EeecccCchhhhhH-hccCCEEEEecCChHHHHHH
Confidence 33332 1111 111 137899999998887 5443
No 382
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=27.34 E-value=65 Score=28.49 Aligned_cols=34 Identities=15% Similarity=0.015 Sum_probs=24.9
Q ss_pred eeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeCC
Q 025793 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (248)
Q Consensus 86 ~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND~ 121 (248)
..+|+|.|.|.+||..++++.... .++-|.|-+.
T Consensus 125 ~~~v~iIGaG~~a~~~~~al~~~~--~~~~V~v~~r 158 (322)
T 1omo_A 125 SSVFGFIGCGTQAYFQLEALRRVF--DIGEVKAYDV 158 (322)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHS--CCCEEEEECS
T ss_pred CCEEEEEcCcHHHHHHHHHHHHhC--CccEEEEECC
Confidence 358999999999999999876521 3555555554
No 383
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=27.29 E-value=88 Score=26.38 Aligned_cols=34 Identities=18% Similarity=0.233 Sum_probs=24.4
Q ss_pred ceeeEEEeC-CChhhHHHHHHHhhCCCCCeEEEE-EeCC
Q 025793 85 AKLKVAING-FGRIGRNFLRCWHGRKDSPLDVVV-VNDS 121 (248)
Q Consensus 85 ~~vkV~ING-FGRIGRlvlR~~~~~~~~~l~iVa-IND~ 121 (248)
|..+|.|-| -|.||+.+++.++++ ..+|++ ++++
T Consensus 8 ~~~~vlVTGatGfIG~~l~~~Ll~~---G~~V~~~~r~~ 43 (338)
T 2rh8_A 8 GKKTACVVGGTGFVASLLVKLLLQK---GYAVNTTVRDP 43 (338)
T ss_dssp -CCEEEEECTTSHHHHHHHHHHHHT---TCEEEEEESCT
T ss_pred CCCEEEEECCchHHHHHHHHHHHHC---CCEEEEEEcCc
Confidence 345788988 799999999988874 246654 4444
No 384
>2dwc_A PH0318, 433AA long hypothetical phosphoribosylglycinamide transferase; purine ribonucleotide biosynthesis; HET: ADP; 1.70A {Pyrococcus horikoshii} PDB: 2czg_A*
Probab=26.97 E-value=72 Score=28.60 Aligned_cols=33 Identities=21% Similarity=0.322 Sum_probs=26.6
Q ss_pred ceeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeC
Q 025793 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (248)
Q Consensus 85 ~~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND 120 (248)
++.||.|-|-|.+||.+++++..+ .++++++..
T Consensus 18 ~~~~ili~g~g~~g~~~~~a~~~~---G~~v~~v~~ 50 (433)
T 2dwc_A 18 SAQKILLLGSGELGKEIAIEAQRL---GVEVVAVDR 50 (433)
T ss_dssp TCCEEEEESCSHHHHHHHHHHHHT---TCEEEEEES
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC---CCEEEEEEC
Confidence 346899999999999999998753 478887764
No 385
>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=26.91 E-value=48 Score=25.89 Aligned_cols=33 Identities=18% Similarity=0.254 Sum_probs=23.7
Q ss_pred ceeeEEEeC-CChhhHHHHHHHhhCCCCCeEEEEE
Q 025793 85 AKLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVV 118 (248)
Q Consensus 85 ~~vkV~ING-FGRIGRlvlR~~~~~~~~~l~iVaI 118 (248)
|.++|.|-| -|.||+.+++.+.++. ...+|+++
T Consensus 4 ~~~~vlVtGatG~iG~~l~~~l~~~g-~~~~V~~~ 37 (215)
T 2a35_A 4 TPKRVLLAGATGLTGEHLLDRILSEP-TLAKVIAP 37 (215)
T ss_dssp CCCEEEEECTTSHHHHHHHHHHHHCT-TCCEEECC
T ss_pred CCceEEEECCCcHHHHHHHHHHHhCC-CCCeEEEE
Confidence 345789988 7999999999988752 11155554
No 386
>2vqe_K 30S ribosomal protein S11, 30S ribosomal protein S6; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: c.55.4.1 PDB: 1gix_N* 1hnw_K* 1hnx_K* 1hnz_K* 1hr0_K 1ibk_K* 1ibl_K* 1ibm_K 1j5e_K 1jgo_N* 1jgp_N* 1jgq_N* 1ml5_N* 1n32_K* 1n33_K* 1n34_K 1n36_K 1xmo_K* 1xmq_K* 1xnq_K* ...
Probab=26.78 E-value=93 Score=24.81 Aligned_cols=34 Identities=29% Similarity=0.476 Sum_probs=25.6
Q ss_pred ceeeEEEeCCChhhH-HHHHHHhhCCCCCeEEEEEeCCC
Q 025793 85 AKLKVAINGFGRIGR-NFLRCWHGRKDSPLDVVVVNDSG 122 (248)
Q Consensus 85 ~~vkV~INGFGRIGR-lvlR~~~~~~~~~l~iVaIND~~ 122 (248)
..+.|-|.|||. || .++|++.. ..++|.-|-|..
T Consensus 78 ~~v~V~vkG~G~-Gre~airaL~~---~Gl~I~~I~DvT 112 (129)
T 2vqe_K 78 QSVDVIVRGTGA-GREQAIRALQA---SGLQVKSIVDDT 112 (129)
T ss_dssp CEEEEEEESCCT-THHHHHHHHHT---SSSEEEECEECC
T ss_pred eEEEEEEECCCC-CHHHHHHHHHH---CCCEEEEEEEcC
Confidence 358899999996 66 56677664 358999998853
No 387
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=26.26 E-value=1.2e+02 Score=30.25 Aligned_cols=30 Identities=27% Similarity=0.243 Sum_probs=23.3
Q ss_pred eeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEe
Q 025793 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIN 119 (248)
.||+|.|.|.+|..++..+... .++|+.++
T Consensus 313 ~kV~VIGaG~MG~~iA~~la~a---G~~V~l~D 342 (725)
T 2wtb_A 313 KKVAIIGGGLMGSGIATALILS---NYPVILKE 342 (725)
T ss_dssp CCEEEECCSHHHHHHHHHHHTT---TCCEEEEC
T ss_pred cEEEEEcCCHhhHHHHHHHHhC---CCEEEEEE
Confidence 5899999999999999887643 35666554
No 388
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=25.89 E-value=68 Score=27.98 Aligned_cols=24 Identities=33% Similarity=0.491 Sum_probs=20.1
Q ss_pred ceeeEEEeCC-ChhhHHHHHHHhhC
Q 025793 85 AKLKVAINGF-GRIGRNFLRCWHGR 108 (248)
Q Consensus 85 ~~vkV~INGF-GRIGRlvlR~~~~~ 108 (248)
+++||.|-|- |.||..+++.+..+
T Consensus 3 ~~mkVlVtGaaGfIG~~l~~~L~~~ 27 (327)
T 1y7t_A 3 APVRVAVTGAAGQIGYSLLFRIAAG 27 (327)
T ss_dssp CCEEEEESSTTSHHHHHHHHHHHTT
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhC
Confidence 4579999996 99999998887754
No 389
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=25.86 E-value=77 Score=26.65 Aligned_cols=30 Identities=27% Similarity=0.438 Sum_probs=23.3
Q ss_pred eeEEEeC-CChhhHHHHHHHhhCCCCCeEEEEEe
Q 025793 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVN 119 (248)
Q Consensus 87 vkV~ING-FGRIGRlvlR~~~~~~~~~l~iVaIN 119 (248)
++|.|-| -|.||+.+++.+.++ ..+|+++.
T Consensus 14 M~ilVtGatG~iG~~l~~~L~~~---g~~V~~~~ 44 (342)
T 2x4g_A 14 VKYAVLGATGLLGHHAARAIRAA---GHDLVLIH 44 (342)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHT---TCEEEEEE
T ss_pred CEEEEECCCcHHHHHHHHHHHHC---CCEEEEEe
Confidence 4899999 599999999998875 24666553
No 390
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=25.85 E-value=60 Score=27.19 Aligned_cols=30 Identities=20% Similarity=0.215 Sum_probs=22.6
Q ss_pred eeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEE
Q 025793 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVV 118 (248)
Q Consensus 86 ~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaI 118 (248)
+.+|+|.|-|..|-.++..+..+ .++|+++
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~---G~~V~vl 31 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAA---GHQVHLF 31 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHT---TCCEEEE
T ss_pred CceEEEECCcHHHHHHHHHHHHC---CCcEEEE
Confidence 45899999999999888876543 3565555
No 391
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=25.70 E-value=58 Score=27.39 Aligned_cols=23 Identities=30% Similarity=0.348 Sum_probs=19.6
Q ss_pred eeeEEEeC-CChhhHHHHHHHhhC
Q 025793 86 KLKVAING-FGRIGRNFLRCWHGR 108 (248)
Q Consensus 86 ~vkV~ING-FGRIGRlvlR~~~~~ 108 (248)
+++|.|-| -|.||+.++|.+.++
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~ 27 (321)
T 3c1o_A 4 MEKIIIYGGTGYIGKFMVRASLSF 27 (321)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHT
T ss_pred ccEEEEEcCCchhHHHHHHHHHhC
Confidence 35799999 599999999998875
No 392
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=25.66 E-value=87 Score=26.12 Aligned_cols=30 Identities=27% Similarity=0.277 Sum_probs=22.7
Q ss_pred eeEEEeC-CChhhHHHHHHHhhCCCCCeEEEEEe
Q 025793 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVN 119 (248)
Q Consensus 87 vkV~ING-FGRIGRlvlR~~~~~~~~~l~iVaIN 119 (248)
++|.|-| -|.||+.+++.+.++ ..+++++.
T Consensus 4 ~~ilVtGatG~iG~~l~~~L~~~---g~~v~~~~ 34 (321)
T 1e6u_A 4 QRVFIAGHRGMVGSAIRRQLEQR---GDVELVLR 34 (321)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTC---TTEEEECC
T ss_pred CEEEEECCCcHHHHHHHHHHHhC---CCeEEEEe
Confidence 5789988 599999999988764 24555553
No 393
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=25.21 E-value=58 Score=28.62 Aligned_cols=21 Identities=29% Similarity=0.469 Sum_probs=17.9
Q ss_pred eeEEEeCCChhhHHHHHHHhh
Q 025793 87 LKVAINGFGRIGRNFLRCWHG 107 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~ 107 (248)
+||+|.|.|.+|..++..+..
T Consensus 1 mkI~VIGaG~~G~~la~~l~~ 21 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALLM 21 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHh
Confidence 489999999999988877654
No 394
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=24.80 E-value=61 Score=28.24 Aligned_cols=23 Identities=30% Similarity=0.382 Sum_probs=19.2
Q ss_pred eeeEEEeCCChhhHHHHHHHhhC
Q 025793 86 KLKVAINGFGRIGRNFLRCWHGR 108 (248)
Q Consensus 86 ~vkV~INGFGRIGRlvlR~~~~~ 108 (248)
++||+|.|.|.+|..++..+...
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~ 26 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKD 26 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhC
Confidence 46899999999999988776643
No 395
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=24.40 E-value=74 Score=27.52 Aligned_cols=44 Identities=16% Similarity=0.234 Sum_probs=30.9
Q ss_pred eeEEEeC-CChhhHHHHHHHhhCCCCCeEEEEEeCCCChhhhhhhcc
Q 025793 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLK 132 (248)
Q Consensus 87 vkV~ING-FGRIGRlvlR~~~~~~~~~l~iVaIND~~~~e~~ayLLk 132 (248)
|||.|-| -|.||+.+++.+.++. .++++++.-..+.+.+..+++
T Consensus 1 M~VlVtGatG~iG~~l~~~L~~~g--~~~v~~~d~~~d~~~l~~~~~ 45 (369)
T 3st7_A 1 MNIVITGAKGFVGKNLKADLTSTT--DHHIFEVHRQTKEEELESALL 45 (369)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHC--CCEEEECCTTCCHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCC--CCEEEEECCCCCHHHHHHHhc
Confidence 4788999 7999999999888652 247766643256666666654
No 396
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=24.26 E-value=84 Score=25.51 Aligned_cols=32 Identities=19% Similarity=0.137 Sum_probs=23.8
Q ss_pred ceeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEe
Q 025793 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (248)
Q Consensus 85 ~~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIN 119 (248)
|+.+|+|.|-|..|-..++.+..+ .++++.|-
T Consensus 1 m~~~vvIIG~G~aGl~aA~~l~~~---g~~v~lie 32 (297)
T 3fbs_A 1 MKFDVIIIGGSYAGLSAALQLGRA---RKNILLVD 32 (297)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHT---TCCEEEEE
T ss_pred CCCCEEEECCCHHHHHHHHHHHhC---CCCEEEEe
Confidence 446899999999999888776653 25666554
No 397
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=24.09 E-value=84 Score=27.80 Aligned_cols=24 Identities=33% Similarity=0.367 Sum_probs=19.9
Q ss_pred ceeeEEEeC-CChhhHHHHHHHhhC
Q 025793 85 AKLKVAING-FGRIGRNFLRCWHGR 108 (248)
Q Consensus 85 ~~vkV~ING-FGRIGRlvlR~~~~~ 108 (248)
+++||+|-| -|.+|..+++.+..+
T Consensus 7 ~~mKI~ViGAaG~VG~~la~~L~~~ 31 (326)
T 1smk_A 7 PGFKVAILGAAGGIGQPLAMLMKMN 31 (326)
T ss_dssp -CEEEEEETTTSTTHHHHHHHHHHC
T ss_pred CCCEEEEECCCChHHHHHHHHHHhC
Confidence 457999999 899999998887664
No 398
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=23.90 E-value=78 Score=29.46 Aligned_cols=30 Identities=23% Similarity=0.223 Sum_probs=23.0
Q ss_pred eeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEe
Q 025793 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIN 119 (248)
.+|.|.|.|.||+.+++.+... ..+|++++
T Consensus 4 k~VlViGaG~iG~~ia~~L~~~---G~~V~v~~ 33 (450)
T 1ff9_A 4 KSVLMLGSGFVTRPTLDVLTDS---GIKVTVAC 33 (450)
T ss_dssp CEEEEECCSTTHHHHHHHHHTT---TCEEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhC---cCEEEEEE
Confidence 4789999999999999988753 25655554
No 399
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=23.78 E-value=75 Score=26.88 Aligned_cols=31 Identities=26% Similarity=0.221 Sum_probs=23.0
Q ss_pred ceeeEEEeC-CChhhHHHHHHHhhCCCCCeEEEEE
Q 025793 85 AKLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVV 118 (248)
Q Consensus 85 ~~vkV~ING-FGRIGRlvlR~~~~~~~~~l~iVaI 118 (248)
|.++|.|-| -|.||+.+++.+.++ + .+|+++
T Consensus 1 M~~~vlVtGatG~iG~~l~~~L~~~-g--~~V~~~ 32 (348)
T 1ek6_A 1 MAEKVLVTGGAGYIGSHTVLELLEA-G--YLPVVI 32 (348)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHT-T--CCEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC-C--CEEEEE
Confidence 345788987 699999999988875 2 455555
No 400
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=23.78 E-value=92 Score=26.64 Aligned_cols=31 Identities=13% Similarity=0.151 Sum_probs=24.3
Q ss_pred ceeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEE
Q 025793 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVV 118 (248)
Q Consensus 85 ~~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaI 118 (248)
+..+|+|.|-|-+|-.+++.+..+ .++|+.|
T Consensus 16 ~~~dvvIIGgG~~Gl~~A~~La~~---G~~V~ll 46 (382)
T 1ryi_A 16 RHYEAVVIGGGIIGSAIAYYLAKE---NKNTALF 46 (382)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHT---TCCEEEE
T ss_pred CCCCEEEECcCHHHHHHHHHHHhC---CCcEEEE
Confidence 568999999999999888877654 3566666
No 401
>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} SCOP: c.30.1.2 d.142.1.1 PDB: 1iov_A* 2dln_A* 3v4z_A*
Probab=23.68 E-value=86 Score=26.11 Aligned_cols=33 Identities=21% Similarity=0.128 Sum_probs=25.1
Q ss_pred ceeeEEEeCCCh---------hhHHHHHHHhhCCCCCeEEEEEeC
Q 025793 85 AKLKVAINGFGR---------IGRNFLRCWHGRKDSPLDVVVVND 120 (248)
Q Consensus 85 ~~vkV~INGFGR---------IGRlvlR~~~~~~~~~l~iVaIND 120 (248)
|++||+|-|-|. .|+.+++++-.+ .+++++++.
T Consensus 1 m~~~i~il~gg~s~e~~~s~~~~~~l~~al~~~---G~~v~~~~~ 42 (306)
T 1iow_A 1 MTDKIAVLLGGTSAEREVSLNSGAAVLAGLREG---GIDAYPVDP 42 (306)
T ss_dssp CCCEEEEECCCSSTTHHHHHHHHHHHHHHHHHT---TCEEEEECT
T ss_pred CCcEEEEEeCCCCccceEcHHhHHHHHHHHHHC---CCeEEEEec
Confidence 457899999988 788888887653 477777754
No 402
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=23.46 E-value=89 Score=26.51 Aligned_cols=31 Identities=26% Similarity=0.212 Sum_probs=23.7
Q ss_pred eeeEEEeC-CChhhHHHHHHHhhCCCCCeEEEEEe
Q 025793 86 KLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVN 119 (248)
Q Consensus 86 ~vkV~ING-FGRIGRlvlR~~~~~~~~~l~iVaIN 119 (248)
+++|.|-| -|.||+.+++.+..+ ..+|+++.
T Consensus 25 ~~~vlVtGatG~iG~~l~~~L~~~---g~~V~~~~ 56 (351)
T 3ruf_A 25 PKTWLITGVAGFIGSNLLEKLLKL---NQVVIGLD 56 (351)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT---TCEEEEEE
T ss_pred CCeEEEECCCcHHHHHHHHHHHHC---CCEEEEEe
Confidence 35899998 599999999998875 24666554
No 403
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=22.99 E-value=75 Score=27.52 Aligned_cols=22 Identities=23% Similarity=0.406 Sum_probs=18.8
Q ss_pred eeEEEeCCChhhHHHHHHHhhC
Q 025793 87 LKVAINGFGRIGRNFLRCWHGR 108 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~ 108 (248)
+||+|.|.|.+|..++..+...
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~ 23 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQ 23 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhC
Confidence 5899999999999988877653
No 404
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=22.98 E-value=83 Score=28.73 Aligned_cols=30 Identities=23% Similarity=0.306 Sum_probs=25.2
Q ss_pred eeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEe
Q 025793 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIN 119 (248)
.||+|-|-|.+||.+++++... .++++++.
T Consensus 36 ~~IlIlG~G~lg~~~~~aa~~l---G~~v~v~d 65 (419)
T 4e4t_A 36 AWLGMVGGGQLGRMFCFAAQSM---GYRVAVLD 65 (419)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT---TCEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHC---CCEEEEEC
Confidence 4899999999999999988754 47888774
No 405
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=22.81 E-value=79 Score=26.25 Aligned_cols=34 Identities=15% Similarity=0.107 Sum_probs=25.0
Q ss_pred cceeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeC
Q 025793 84 VAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (248)
Q Consensus 84 ~~~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND 120 (248)
.++.+|+|.|-|..|-..++.+..+ .++++.|-.
T Consensus 20 ~~~~~vvIIG~G~aGl~aA~~l~~~---g~~v~vie~ 53 (338)
T 3itj_A 20 HVHNKVTIIGSGPAAHTAAIYLARA---EIKPILYEG 53 (338)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHT---TCCCEEECC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHC---CCCEEEEec
Confidence 3668999999999999888877654 356665543
No 406
>4ea9_A Perosamine N-acetyltransferase; beta helix, acetyl coenzyme A, GDP-perosa transferase; HET: JBT; 0.90A {Caulobacter vibrioides} PDB: 4ea8_A* 4ea7_A* 4eaa_A* 4eab_A*
Probab=22.57 E-value=89 Score=25.40 Aligned_cols=32 Identities=19% Similarity=0.156 Sum_probs=26.0
Q ss_pred eeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeCC
Q 025793 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND~ 121 (248)
.+|.|+|-|--||.+++++.. ...++++.=|.
T Consensus 13 k~v~IiGAGg~g~~v~~~l~~---~~~~~vgfiDd 44 (220)
T 4ea9_A 13 GGVVIIGGGGHAKVVIESLRA---CGETVAAIVDA 44 (220)
T ss_dssp SCEEEECCSHHHHHHHHHHHH---TTCCEEEEECS
T ss_pred CCEEEEcCCHHHHHHHHHHHh---CCCEEEEEEeC
Confidence 479999999999999998765 34777777664
No 407
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=22.55 E-value=53 Score=28.06 Aligned_cols=22 Identities=18% Similarity=0.270 Sum_probs=11.3
Q ss_pred cCchhhhHHHHcCCCEEEEcCC
Q 025793 188 VDGPGAGKHIQAGAKKVIITAP 209 (248)
Q Consensus 188 ~~~e~a~~HL~~GAKKVIISAP 209 (248)
++.+.++.-|+.||.||+|.+.
T Consensus 85 rs~e~~~~~l~~GadkVii~t~ 106 (243)
T 4gj1_A 85 RSKEEVKALLDCGVKRVVIGSM 106 (243)
T ss_dssp CCHHHHHHHHHTTCSEEEECTT
T ss_pred ccHHHHHHHHHcCCCEEEEccc
Confidence 4444555555555555555543
No 408
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=22.44 E-value=96 Score=25.74 Aligned_cols=30 Identities=27% Similarity=0.452 Sum_probs=22.9
Q ss_pred eeEEEeCC-ChhhHHHHHHHhhCCCCCeEEEEEe
Q 025793 87 LKVAINGF-GRIGRNFLRCWHGRKDSPLDVVVVN 119 (248)
Q Consensus 87 vkV~INGF-GRIGRlvlR~~~~~~~~~l~iVaIN 119 (248)
+||.|-|- |.||+.+++.+.++ ..+|+++.
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~---g~~V~~~~ 31 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVEL---GYEVVVVD 31 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT---TCEEEEEC
T ss_pred CEEEEECCCChHHHHHHHHHHhC---CCEEEEEe
Confidence 36888887 99999999998875 34666653
No 409
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=22.05 E-value=95 Score=26.54 Aligned_cols=31 Identities=16% Similarity=0.224 Sum_probs=24.0
Q ss_pred ceeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEE
Q 025793 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVV 118 (248)
Q Consensus 85 ~~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaI 118 (248)
|..+|+|.|-|-+|-.+++.+..+ .++|+.|
T Consensus 2 ~~~dvvIIGaG~~Gl~~A~~La~~---G~~V~vi 32 (389)
T 2gf3_A 2 THFDVIVVGAGSMGMAAGYQLAKQ---GVKTLLV 32 (389)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHT---TCCEEEE
T ss_pred CcCCEEEECCCHHHHHHHHHHHhC---CCeEEEE
Confidence 457999999999999888877654 3566655
No 410
>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}
Probab=21.97 E-value=55 Score=26.89 Aligned_cols=31 Identities=13% Similarity=0.191 Sum_probs=23.3
Q ss_pred eeeEEEeCC-ChhhHHHHHHHhhCCCCCeEEEEEe
Q 025793 86 KLKVAINGF-GRIGRNFLRCWHGRKDSPLDVVVVN 119 (248)
Q Consensus 86 ~vkV~INGF-GRIGRlvlR~~~~~~~~~l~iVaIN 119 (248)
+.+|.|-|- |.||+.+++.+.++ ..+|+++.
T Consensus 2 ~~~ilVtGatG~iG~~l~~~L~~~---g~~V~~~~ 33 (267)
T 3ay3_A 2 LNRLLVTGAAGGVGSAIRPHLGTL---AHEVRLSD 33 (267)
T ss_dssp EEEEEEESTTSHHHHHHGGGGGGT---EEEEEECC
T ss_pred CceEEEECCCCHHHHHHHHHHHhC---CCEEEEEe
Confidence 357888886 99999999988764 35666553
No 411
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=21.92 E-value=80 Score=26.90 Aligned_cols=31 Identities=23% Similarity=0.229 Sum_probs=23.2
Q ss_pred ceeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEE
Q 025793 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVV 118 (248)
Q Consensus 85 ~~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaI 118 (248)
|..+|+|.|-|-+|-.++..+..+ .++|+.|
T Consensus 1 m~~dvvIIG~Gi~Gl~~A~~La~~---G~~V~vl 31 (372)
T 2uzz_A 1 MKYDLIIIGSGSVGAAAGYYATRA---GLNVLMT 31 (372)
T ss_dssp -CEEEEESCTTHHHHHHHHHHHHT---TCCEEEE
T ss_pred CCCCEEEECCCHHHHHHHHHHHHC---CCeEEEE
Confidence 346899999999999888877654 3566555
No 412
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=21.88 E-value=98 Score=26.33 Aligned_cols=31 Identities=23% Similarity=0.284 Sum_probs=24.4
Q ss_pred eeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeC
Q 025793 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND 120 (248)
.+|.|-|.|-+||.+++.+.... .+|+++|-
T Consensus 120 k~vlViGaGg~g~a~a~~L~~~G---~~V~v~~R 150 (271)
T 1nyt_A 120 LRILLIGAGGASRGVLLPLLSLD---CAVTITNR 150 (271)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEECS
T ss_pred CEEEEECCcHHHHHHHHHHHHcC---CEEEEEEC
Confidence 47999999999999999887642 46666654
No 413
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=21.47 E-value=73 Score=30.14 Aligned_cols=30 Identities=20% Similarity=0.290 Sum_probs=23.0
Q ss_pred eeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEe
Q 025793 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (248)
Q Consensus 87 vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIN 119 (248)
.||+|.|.|.+|..+++.+... .++|+..+
T Consensus 6 ~kVgVIGaG~MG~~IA~~la~a---G~~V~l~D 35 (483)
T 3mog_A 6 QTVAVIGSGTMGAGIAEVAASH---GHQVLLYD 35 (483)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT---TCCEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHHC---CCeEEEEE
Confidence 4899999999999999887653 35655543
No 414
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=21.47 E-value=83 Score=26.14 Aligned_cols=29 Identities=24% Similarity=0.279 Sum_probs=22.1
Q ss_pred eeEEEeC-CChhhHHHHHHHhhCCCCCeEEEEE
Q 025793 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVV 118 (248)
Q Consensus 87 vkV~ING-FGRIGRlvlR~~~~~~~~~l~iVaI 118 (248)
++|.|-| -|.||+.+++.+.++. .+|+++
T Consensus 5 ~~ilVtGatG~iG~~l~~~L~~~g---~~V~~~ 34 (313)
T 1qyd_A 5 SRVLIVGGTGYIGKRIVNASISLG---HPTYVL 34 (313)
T ss_dssp CCEEEESTTSTTHHHHHHHHHHTT---CCEEEE
T ss_pred CEEEEEcCCcHHHHHHHHHHHhCC---CcEEEE
Confidence 4799998 5999999999988752 345444
No 415
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=21.42 E-value=97 Score=27.11 Aligned_cols=31 Identities=19% Similarity=0.163 Sum_probs=23.6
Q ss_pred ceeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEE
Q 025793 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVV 118 (248)
Q Consensus 85 ~~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaI 118 (248)
.+.+|.|.|-|..|-.++..+..+ .++++.+
T Consensus 22 ~~~dV~IVGaG~aGl~~A~~La~~---G~~V~v~ 52 (407)
T 3rp8_A 22 GHMKAIVIGAGIGGLSAAVALKQS---GIDCDVY 52 (407)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHT---TCEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC---CCCEEEE
Confidence 457999999999999888877653 3566655
No 416
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=21.33 E-value=77 Score=28.54 Aligned_cols=32 Identities=25% Similarity=0.315 Sum_probs=23.7
Q ss_pred ceeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEe
Q 025793 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (248)
Q Consensus 85 ~~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIN 119 (248)
|+.+|.|.|-|..|..++..+..+ .++++.|-
T Consensus 21 m~~~ViIVGaGpaGl~~A~~La~~---G~~V~viE 52 (430)
T 3ihm_A 21 MKKRIGIVGAGTAGLHLGLFLRQH---DVDVTVYT 52 (430)
T ss_dssp --CEEEEECCHHHHHHHHHHHHHT---TCEEEEEE
T ss_pred CCCCEEEECCcHHHHHHHHHHHHC---CCeEEEEc
Confidence 667999999999999888776553 46766664
No 417
>2j8a_A Histone-lysine N-methyltransferase, H3 lysine-4 specific; histone methyltransferase, RRM fold, telomere, nuclear protein; 3.0A {Saccharomyces cerevisiae}
Probab=21.19 E-value=95 Score=25.23 Aligned_cols=82 Identities=13% Similarity=0.142 Sum_probs=47.2
Q ss_pred ceeeEEEeCC-----ChhhHHHHHHHhhCCCCCeEEEEEeCC-CChhhhhhhccccCcCcccCce----EEE-e--cCCc
Q 025793 85 AKLKVAINGF-----GRIGRNFLRCWHGRKDSPLDVVVVNDS-GGVKNASHLLKYDSLLGTFKAD----VKI-V--DNET 151 (248)
Q Consensus 85 ~~vkV~INGF-----GRIGRlvlR~~~~~~~~~l~iVaIND~-~~~e~~ayLLkYDStHGkf~g~----V~v-~--e~~~ 151 (248)
|+.+|.|.|| =.+--.-+|.+|...+.=.++..|+|+ ...-.=.++++|...-|+-+.. -++ . +.+.
T Consensus 1 mp~kI~VgnL~~~~~~~tte~~Lk~~Fs~fGeV~~~~li~Dp~Tg~slGfgfVef~d~~g~~d~a~kAA~kAi~~~~lng 80 (136)
T 2j8a_A 1 MSCEIVVYPAQDSTTTNIQDISIKNYFKKYGEISHFEAFNDPNSALPLHVYLIKYASSDGKINDAAKAAFSAVRKHESSG 80 (136)
T ss_dssp -CCEEEEEESSSSCCCCCCHHHHHHHHHTTSCCSEEEEEECTTTCCEEEEEEEECC------CCHHHHHHHHHHHTTTTC
T ss_pred CCcEEEEeCCCCCCCCCCCHHHHHHHHHhcCCeEEEEEEecCCCCceeeEEEEEECCCCCCcchHHHHHHHHHHHhhhcC
Confidence 4567778777 224455678888765433488889998 3333444678887533332221 111 1 2266
Q ss_pred EEECCeEEEEEecCC
Q 025793 152 ISVDGKLIKVVSNRD 166 (248)
Q Consensus 152 L~inGk~I~v~~~~d 166 (248)
..|+|++|+|-..++
T Consensus 81 ~~I~Gr~irV~ln~~ 95 (136)
T 2j8a_A 81 CFIMGFKFEVILNKH 95 (136)
T ss_dssp EEETTEEEEEEECCT
T ss_pred CeecCcEEEEEECcc
Confidence 789999999976554
No 418
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=20.82 E-value=88 Score=25.93 Aligned_cols=22 Identities=23% Similarity=0.348 Sum_probs=19.1
Q ss_pred eeEEEeCC-ChhhHHHHHHHhhC
Q 025793 87 LKVAINGF-GRIGRNFLRCWHGR 108 (248)
Q Consensus 87 vkV~INGF-GRIGRlvlR~~~~~ 108 (248)
.+|.|-|- |.||+.+++.+.++
T Consensus 5 ~~ilVtGatG~iG~~l~~~L~~~ 27 (308)
T 1qyc_A 5 SRILLIGATGYIGRHVAKASLDL 27 (308)
T ss_dssp CCEEEESTTSTTHHHHHHHHHHT
T ss_pred CEEEEEcCCcHHHHHHHHHHHhC
Confidence 47999995 99999999998875
No 419
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=20.49 E-value=1.1e+02 Score=29.13 Aligned_cols=31 Identities=26% Similarity=0.382 Sum_probs=24.1
Q ss_pred eeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEe
Q 025793 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (248)
Q Consensus 86 ~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIN 119 (248)
..||+|.|.|.+|..++..+... .++|+..+
T Consensus 54 i~kVaVIGaG~MG~~IA~~la~a---G~~V~l~D 84 (460)
T 3k6j_A 54 VNSVAIIGGGTMGKAMAICFGLA---GIETFLVV 84 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT---TCEEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHHC---CCeEEEEE
Confidence 36899999999999999877653 46766553
No 420
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=20.43 E-value=1e+02 Score=28.95 Aligned_cols=32 Identities=25% Similarity=0.422 Sum_probs=25.0
Q ss_pred ceeeEEEeCCChhhHHHHHHHhhCCCCCeEEEEEe
Q 025793 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (248)
Q Consensus 85 ~~vkV~INGFGRIGRlvlR~~~~~~~~~l~iVaIN 119 (248)
..+++++.|.|.+|..++.++... ..+|+.++
T Consensus 7 ~~~~~~vIGlG~vG~~~A~~La~~---G~~V~~~D 38 (446)
T 4a7p_A 7 GSVRIAMIGTGYVGLVSGACFSDF---GHEVVCVD 38 (446)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT---TCEEEEEC
T ss_pred CceEEEEEcCCHHHHHHHHHHHHC---CCEEEEEe
Confidence 468999999999999988887653 35666664
No 421
>3aw8_A PURK, phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp; HET: AMP; 2.60A {Thermus thermophilus}
Probab=20.11 E-value=81 Score=27.53 Aligned_cols=30 Identities=20% Similarity=0.204 Sum_probs=23.5
Q ss_pred eEEEeCCChhhHHHHHHHhhCCCCCeEEEEEeC
Q 025793 88 KVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (248)
Q Consensus 88 kV~INGFGRIGRlvlR~~~~~~~~~l~iVaIND 120 (248)
||.|-|-|.+||.+++++.. ..++++++..
T Consensus 1 ~iliiG~g~~g~~~~~a~~~---~G~~v~~~~~ 30 (369)
T 3aw8_A 1 MIGILGGGQLGRMLALAGYP---LGLSFRFLDP 30 (369)
T ss_dssp CEEEECCSHHHHHHHHHHTT---BTCCEEEEES
T ss_pred CEEEECCCHHHHHHHHHHHH---cCCEEEEEeC
Confidence 58999999999999998743 2467777763
Done!