BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025798
(248 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8LEJ6|FLA11_ARATH Fasciclin-like arabinogalactan protein 11 OS=Arabidopsis thaliana
GN=FLA11 PE=2 SV=2
Length = 246
Score = 242 bits (617), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 120/196 (61%), Positives = 154/196 (78%), Gaps = 6/196 (3%)
Query: 8 FAFSLVLLFLLHCTNTVVAQPAAAPAPGPPGPTNVTKVLEKAGQFTLFIRLLKATSVADQ 67
F FS + +F L T APAPGP GPTN+T +LEKAGQFTLFIRLLK+T +DQ
Sbjct: 7 FIFSNLFIFFLVIATTY----GQAPAPGPSGPTNITAILEKAGQFTLFIRLLKSTQASDQ 62
Query: 68 IDHQLNDTN-NGMTLFAPTDNAFSSLSSGTLNSLNDQEKVALIQFHVIPTYVSLSQFQTV 126
I+ QLN ++ NG+T+FAPTDNAF+SL SGTLNSL+DQ+KV L+QFHV+PT +++ QFQTV
Sbjct: 63 INTQLNSSSSNGLTVFAPTDNAFNSLKSGTLNSLSDQQKVQLVQFHVLPTLITMPQFQTV 122
Query: 127 SNPLRTNAGDSSRFEYPLNVTTFGNSVNISSGITNTSVSGTVYTDGQLAVYQVDKVLLPW 186
SNPLRT AGD ++PLN+T+ GN VNI++G+ + +V+ +VY+D QLAVYQVD+VLLP
Sbjct: 123 SNPLRTQAGDGQNGKFPLNITSSGNQVNITTGVVSATVANSVYSDKQLAVYQVDQVLLPL 182
Query: 187 DLFGAKPPAPAPAPEK 202
+FG+ APAPAPEK
Sbjct: 183 AMFGSS-VAPAPAPEK 197
>sp|Q8LEE9|FLA12_ARATH Fasciclin-like arabinogalactan protein 12 OS=Arabidopsis thaliana
GN=FLA12 PE=2 SV=2
Length = 249
Score = 221 bits (564), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 105/150 (70%), Positives = 133/150 (88%)
Query: 40 TNVTKVLEKAGQFTLFIRLLKATSVADQIDHQLNDTNNGMTLFAPTDNAFSSLSSGTLNS 99
TNVTK+LEKAGQFT+FIRLLK+T VA+Q+ QLN+++NG+T+FAP+D++F+ L +GTLNS
Sbjct: 38 TNVTKILEKAGQFTVFIRLLKSTGVANQLYGQLNNSDNGITIFAPSDSSFTGLKAGTLNS 97
Query: 100 LNDQEKVALIQFHVIPTYVSLSQFQTVSNPLRTNAGDSSRFEYPLNVTTFGNSVNISSGI 159
L D+++V LIQFHVIP+YVS S FQT+SNPLRT AGDS+ +PLNVTT GN+VNI+SG+
Sbjct: 98 LTDEQQVELIQFHVIPSYVSSSNFQTISNPLRTQAGDSADGHFPLNVTTSGNTVNITSGV 157
Query: 160 TNTSVSGTVYTDGQLAVYQVDKVLLPWDLF 189
TNT+VSG VY+DGQLAVYQVDKVLLP +F
Sbjct: 158 TNTTVSGNVYSDGQLAVYQVDKVLLPQQVF 187
>sp|Q9FFH6|FLA13_ARATH Fasciclin-like arabinogalactan protein 13 OS=Arabidopsis thaliana
GN=FLA13 PE=1 SV=1
Length = 247
Score = 149 bits (376), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 80/179 (44%), Positives = 109/179 (60%), Gaps = 3/179 (1%)
Query: 41 NVTKVLEKAGQFTLFIRLLKATSVADQIDHQLNDTNNGMTLFAPTDNAFSSLSSGTLNSL 100
N+T +LEK GQF IRLL T + +QI+ Q+N ++ GMT+ APTDNAF +L GTLN L
Sbjct: 36 NITAILEKGGQFVTLIRLLNTTQIGNQINIQINSSSEGMTVLAPTDNAFQNLKPGTLNKL 95
Query: 101 NDQEKVALIQFHVIPTYVSLSQFQTVSNPLRTNA-GDSSRFEYPLNVTTFGNSVNISSGI 159
+ ++V LI +HV P + +L +VSNP+RT A G Y LN T GN VN+S+G+
Sbjct: 96 SPDDQVKLILYHVSPKFYTLEDLLSVSNPVRTQASGRDVGGVYGLNFTGQGNQVNVSTGV 155
Query: 160 TNTSVSGTVYTDGQLAVYQVDKVLLPWDLFGAKPPAPAPAPEKPKKKKADAVADGPDGK 218
T +S ++ + LAVY VD VLLP ++FG + +P P PK K D D K
Sbjct: 156 VETRLSTSLRQERPLAVYVVDMVLLPEEMFGERKISPMAPP--PKSKSPDVSDDSESSK 212
>sp|Q9ZWA8|FLA9_ARATH Fasciclin-like arabinogalactan protein 9 OS=Arabidopsis thaliana
GN=FLA9 PE=1 SV=1
Length = 247
Score = 149 bits (375), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 81/174 (46%), Positives = 107/174 (61%), Gaps = 5/174 (2%)
Query: 41 NVTKVLEKAGQFTLFIRLLKATSVADQIDHQLNDTNNGMTLFAPTDNAFSSLSSGTLNSL 100
N+T +LEK GQFT FI LL T V Q++ Q+N ++ GMT+FAPTDNAF +L GTLN L
Sbjct: 39 NLTAILEKGGQFTTFIHLLNITQVGSQVNIQVNSSSEGMTVFAPTDNAFQNLKPGTLNQL 98
Query: 101 NDQEKVALIQFHVIPTYVSLSQFQTVSNPLRTNAGDSSRFEYPLNVTTFGNSVNISSGIT 160
+ ++V LI +HV P Y S+ +VSNP+RT A Y LN T N +N+S+G
Sbjct: 99 SPDDQVKLILYHVSPKYYSMDDLLSVSNPVRTQASGRDNGVYGLNFTGQTNQINVSTGYV 158
Query: 161 NTSVSGTVYTDGQLAVYQVDKVLLPWDLFGAKPPAP-APAPEKPKKKKADAVAD 213
T +S ++ LAVY VD VLLP ++FG +P APAP K K+ V D
Sbjct: 159 ETRISNSLRQQRPLAVYVVDMVLLPGEMFGEHKLSPIAPAP----KSKSGGVTD 208
>sp|Q9SIL7|FLA6_ARATH Fasciclin-like arabinogalactan protein 6 OS=Arabidopsis thaliana
GN=FLA6 PE=2 SV=2
Length = 247
Score = 148 bits (373), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 100/242 (41%), Positives = 134/242 (55%), Gaps = 10/242 (4%)
Query: 12 LVLLFLLHCTNTVVAQPAAAPAPG-PPGPTNVTKVLEKAGQFTLFIRLLKATSVADQIDH 70
+VLL L + +QP A PAP P N+T +LE QFT I+LL T V Q+
Sbjct: 9 VVLLIFLFTIPYIQSQPTA-PAPTTEKSPINLTAILEAGHQFTTLIQLLNTTQVGFQVSV 67
Query: 71 QLNDTNNGMTLFAPTDNAFSSLSSGTLNSLNDQEKVALIQFHVIPTYVSLSQFQTVSNPL 130
QLN ++ GMT+FAPTDNAF+ L GTLNSL Q+++ L+ +H+IP Y SLS SNP+
Sbjct: 68 QLNSSDQGMTIFAPTDNAFNKLKPGTLNSLTYQQQIQLMLYHIIPKYYSLSDLLLASNPV 127
Query: 131 RTNAGDSSRFEYPLNVT--TFGNSVNISSGITNTSVSGTVYTDGQLAVYQVDKVLLPWDL 188
RT A + LN T N VN+S+G+ T ++ + LAVY VD VLLP +L
Sbjct: 128 RTQATGQDGGVFGLNFTGQAQSNQVNVSTGVVETRINNALRQQFPLAVYVVDSVLLPEEL 187
Query: 189 FGAK-PPAPAPAPEKPKKKKADAVADGPDGKVDDSSAMSLMNNIKNAVV--FAHAIAAVI 245
FG K P APA PK + + AD P + SA S + +V FA +VI
Sbjct: 188 FGTKTTPTGAPA---PKSSTSSSDADSPAADDEHKSAGSSVKRTSLGIVVSFALFCCSVI 244
Query: 246 FL 247
++
Sbjct: 245 YI 246
>sp|Q9SJ81|FLA7_ARATH Fasciclin-like arabinogalactan protein 7 OS=Arabidopsis thaliana
GN=FLA7 PE=1 SV=1
Length = 254
Score = 99.0 bits (245), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 58/152 (38%), Positives = 89/152 (58%), Gaps = 6/152 (3%)
Query: 41 NVTKVLEKAGQFTLFIRLLKATSVADQIDHQLNDTNNGMTLFAPTDNAFSSLSSGTLNSL 100
N+T++L AG F F+ L +T V + +Q N+T G+T+F P D+AF + + L++L
Sbjct: 46 NLTELLSVAGPFHTFLDYLLSTGVIETFQNQANNTEEGITIFVPKDDAFKAQKNPPLSNL 105
Query: 101 NDQEKVALIQFHVIPTYVSLSQFQTVSN--PLRTNAGDSSRFEYPLNVTTFGNSVNISSG 158
+ L+ FH +P Y SLS+F+ +S P+ T AG +Y L T +V I S
Sbjct: 106 TKDQLKQLVLFHALPHYYSLSEFKNLSQSGPVSTFAGG----QYSLKFTDVSGTVRIDSL 161
Query: 159 ITNTSVSGTVYTDGQLAVYQVDKVLLPWDLFG 190
T T VS +V++ +AVYQV++VLLP +FG
Sbjct: 162 WTRTKVSSSVFSTDPVAVYQVNRVLLPEAIFG 193
>sp|Q9LZX4|FLA10_ARATH Fasciclin-like arabinogalactan protein 10 OS=Arabidopsis thaliana
GN=FLA10 PE=1 SV=1
Length = 422
Score = 91.3 bits (225), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 59/171 (34%), Positives = 96/171 (56%), Gaps = 6/171 (3%)
Query: 31 APAPGPPGPTNVTKVLEKAGQFTLFIRLLKATSVADQIDHQLNDTNNGMTLFAPTDNAFS 90
APAP G +N+T +LEKAG T F LL ++ V + + G+T+FAP+D AF
Sbjct: 180 APAPSSAGVSNITGLLEKAGCKT-FANLLVSSGVIKTFESTVE---KGLTVFAPSDEAFK 235
Query: 91 SLSSGTLNSLNDQEKVALIQFHVIPTYVSLSQFQTVSNPLRTNAGDSSRFEYPLNVTTFG 150
+ L +L E V+L+++H + Y +T + + T A + + +Y L +T G
Sbjct: 236 ARGVPDLTNLTQAEVVSLLEYHALAEYKPKGSLKTNKDAISTLATNGAG-KYDLTTSTSG 294
Query: 151 NSVNISSGITNTSVSGTVYTDGQLAVYQVDKVLLPWDLFGAKPPAPAPAPE 201
+ V + +G+ + ++ TV + + ++ VD VLLP +LFG K +PAPAPE
Sbjct: 295 DEVILHTGVGPSRLADTVVDETPVVIFTVDNVLLPAELFG-KSSSPAPAPE 344
>sp|Q9SNC3|FLA4_ARATH Fasciclin-like arabinogalactan protein 4 OS=Arabidopsis thaliana
GN=FLA4 PE=1 SV=1
Length = 420
Score = 85.5 bits (210), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 103/190 (54%), Gaps = 8/190 (4%)
Query: 18 LHCTNTVVAQPAAAPAPGPPGPTNVTKVLEKAGQFTLFIRLLKATSVADQIDHQLNDTNN 77
+ + T+ P + PP N+T++L F + + LL A+ V + ++ ++
Sbjct: 184 ITASETLTPPPTSTSLSPPPAGINLTQILINGHNFNVALSLLVASGVITEFEN--DERGA 241
Query: 78 GMTLFAPTDNAFSSLSSGT-LNSLNDQEKVALIQFHVIPTYVSLSQFQTVSNPLRTNAG- 135
G+T+F PTD+AFS L S L SL ++K +++FHV+ +Y +L ++++NP++
Sbjct: 242 GITVFVPTDSAFSDLPSNVNLQSLPAEQKAFVLKFHVLHSYYTLGSLESITNPVQPTLAT 301
Query: 136 -DSSRFEYPLNVTTF-GNSVNISSGITNTSVSGTVYTDGQLAVYQVDKVLLPWDLF--GA 191
+ Y LN++ G+ V I+SG+ V+ T + ++V+ V KVLLP +LF
Sbjct: 302 EEMGAGSYTLNISRVNGSIVTINSGVVLAVVTQTAFDQNPVSVFGVSKVLLPKELFPKSG 361
Query: 192 KPPAPAPAPE 201
+P A AP E
Sbjct: 362 QPVATAPPQE 371
Score = 31.6 bits (70), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 5/86 (5%)
Query: 41 NVTKVLEKAGQFTLFIRLLKATSVADQIDHQLNDTNNGMTLFAPTDNAFSSLSSGTLNSL 100
NVT VL + F LL ++ +A ++ + N +TL A ++ FSS S L
Sbjct: 30 NVTAVLSSFPNLSSFSNLLVSSGIAAELSGR-----NSLTLLAVPNSQFSSASLDLTRRL 84
Query: 101 NDQEKVALIQFHVIPTYVSLSQFQTV 126
L++FHV+ ++S S + +
Sbjct: 85 PPSALADLLRFHVLLQFLSDSDLRRI 110
>sp|O22126|FLA8_ARATH Fasciclin-like arabinogalactan protein 8 OS=Arabidopsis thaliana
GN=FLA8 PE=1 SV=1
Length = 420
Score = 73.6 bits (179), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 86/167 (51%), Gaps = 6/167 (3%)
Query: 25 VAQPAAAPAPGPPGP-TNVTKVLEKAGQFTLFIRLLKATSVADQIDHQLNDTNNGMTLFA 83
+ P AP P +N+T +LEKAG T F LL ++ V + + G+T+FA
Sbjct: 172 IIAPGVLTAPAPSASLSNITGLLEKAGCKT-FANLLVSSGVLKTYESAVE---KGLTVFA 227
Query: 84 PTDNAFSSLSSGTLNSLNDQEKVALIQFHVIPTYVSLSQFQTVSNPLRTNAGDSSRFEYP 143
P+D AF + L L E V+L+++H + Y +T N + T A + + ++
Sbjct: 228 PSDEAFKAEGVPDLTKLTQAEVVSLLEYHALAEYKPKGSLKTNKNNISTLATNGAG-KFD 286
Query: 144 LNVTTFGNSVNISSGITNTSVSGTVYTDGQLAVYQVDKVLLPWDLFG 190
L +T G+ V + +G+ + ++ TV + ++ VD VLLP +LFG
Sbjct: 287 LTTSTSGDEVILHTGVAPSRLADTVLDATPVVIFTVDNVLLPAELFG 333
>sp|Q9SU13|FLA2_ARATH Fasciclin-like arabinogalactan protein 2 OS=Arabidopsis thaliana
GN=FLA2 PE=1 SV=1
Length = 403
Score = 71.6 bits (174), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 109/239 (45%), Gaps = 30/239 (12%)
Query: 17 LLHCTNTVVAQPAAAPAPGPPGPTNVTKVLEKAGQFTLFIRLLKATSVADQIDHQLNDT- 75
+LH + + + A AP P +T +LEK G F +LK+T D DT
Sbjct: 167 VLHISQVLTSPEAEAPTASPSDLI-LTTILEKQG-CKAFSDILKSTGA----DKTFQDTV 220
Query: 76 NNGMTLFAPTDNAFSSLSSGTLNSLNDQEKVALIQFHVIPTYVSLSQFQTVSNPLRTNAG 135
+ G+T+F P+D+A SL+ K AL+ +H +P Y SL ++ + + T A
Sbjct: 221 DGGLTVFCPSDSAVGKFMP-KFKSLSPANKTALVLYHGMPVYQSLQMLRSGNGAVNTLAT 279
Query: 136 DSSRFEYPLNVTTFGNSVNISSGITNTSVSGTVYTDGQLAVYQVDKVLLPWDLFGA---- 191
+ + ++ V G V + + + V GT+ L VY++DKVLLP +++ A
Sbjct: 280 EGNN-KFDFTVQNDGEDVTLETDVVTAKVMGTLKDQEPLIVYKIDKVLLPREIYKAVKTS 338
Query: 192 --------------KPPAPAPAPEKPKKKKADAVADGPDGKVDDSSAMSLMNNIKNAVV 236
+ A P+ + P + VAD +G V S+ ++ +N+ A+V
Sbjct: 339 APAPKSSKKKPKNAEADADGPSADAPSDDDVE-VADDKNGAV--SAMITRTSNVVTAIV 394
Score = 33.5 bits (75), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 66/148 (44%), Gaps = 23/148 (15%)
Query: 9 AFSLVLLFLLHCTNTVVAQPAAAPAPGPPGPTNVTKVLEKAGQFTLFIRLLKATSVADQI 68
A +LVL+F LH ++ N+T++L K F+ F L AT +AD+I
Sbjct: 8 ATALVLIFQLHLFLSL------------SNAHNITRILAKDPDFSTFNHYLSATHLADEI 55
Query: 69 DHQLNDTNNGMTLFAPTDNAFSSLSSGTLNSLNDQEKVALIQFHVIPTYVSLSQFQTVSN 128
+ + +T+ A ++A SS+ S N + + ++ HV+ Y + +++
Sbjct: 56 NRR-----QTITVLAVDNSAMSSILS---NGYSLYQIRNILSLHVLVDYFGTKKLHQITD 107
Query: 129 PLRTNAGDSSRFEYPLNVTTFGNSVNIS 156
+ A S F+ + T +NI+
Sbjct: 108 GSTSTA---SMFQSTGSATGTSGYINIT 132
>sp|Q9FM65|FLA1_ARATH Fasciclin-like arabinogalactan protein 1 OS=Arabidopsis thaliana
GN=FLA1 PE=1 SV=1
Length = 424
Score = 62.0 bits (149), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 59/116 (50%), Gaps = 2/116 (1%)
Query: 76 NNGMTLFAPTDNAFSSLSSGTLNSLNDQEKVALIQFHVIPTYVSLSQFQTVSNPLRTNAG 135
GMT+F P D+A N L +K A + F +PTY S++ ++ + P+ T A
Sbjct: 218 EGGMTVFCPGDDAMKGFLPKYKN-LTAPKKEAFLDFLAVPTYYSMAMLKSNNGPMNTLAT 276
Query: 136 DSSRFEYPLNVTTFGNSVNISSGITNTSVSGTVYTDGQLAVYQVDKVLLPWDLFGA 191
D + ++ L V G V + + I + T+ + LA+Y DKVLLP +LF A
Sbjct: 277 DGAN-KFELTVQNDGEKVTLKTRINTVKIVDTLIDEQPLAIYATDKVLLPKELFKA 331
>sp|P74615|Y1483_SYNY3 Uncharacterized protein sll1483 OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=sll1483 PE=4 SV=1
Length = 180
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 72/145 (49%), Gaps = 18/145 (12%)
Query: 45 VLEKAGQFTLFIRLLKATSVADQIDHQLNDTNNGMTLFAPTDNAFSSLSSGTLNSL---- 100
++E A F L+ A AD ++ T+FAPT++AF++L +GT+ SL
Sbjct: 48 IVEVAAGNETFSTLVAAVKAADLVEAL--SAEGPFTVFAPTNDAFAALPAGTVESLLLPE 105
Query: 101 NDQEKVALIQFHVIPTYVSLSQFQTVSNPLRTNAGDSSRFEYPLNVTTFGNSVNISSGIT 160
N + V ++ +HV+P ++ +Q Q S + + AG++ F+ + IS+ +
Sbjct: 106 NKDKLVKILTYHVVPGKITAAQVQ--SGEVASLAGEALTFKVKDGKVKVNKATVISADVD 163
Query: 161 NTSVSGTVYTDGQLAVYQVDKVLLP 185
+ +G ++ +D+V+LP
Sbjct: 164 AS--NGVIHV--------IDQVILP 178
>sp|Q8RWC5|FLA16_ARATH Fasciclin-like arabinogalactan protein 16 OS=Arabidopsis thaliana
GN=FLA16 PE=2 SV=1
Length = 445
Score = 45.4 bits (106), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 68/158 (43%), Gaps = 8/158 (5%)
Query: 58 LLKATSVADQIDHQLNDTNNGMTLFAPTDNAFSSLSSGTLNSLNDQEKVALIQFHVIPTY 117
L+ TS+A ++ +L +T+ AP D A + L++ L+ E++ + +H+IP Y
Sbjct: 277 LVNLTSLATEMG-RLVSEGYVLTVLAPNDEAMAKLTTDQLSEPGAPEQI--MYYHIIPEY 333
Query: 118 VSLSQFQTVSNPLRTNAGDSSRFEYPLNVTTFGNSVNISSGITNTSV-SGTVYTDGQLAV 176
+ DS RF + + SV G + + +YTDG+++V
Sbjct: 334 QTEESMYNAVRRFGKVKYDSLRFPHKVLAQEADGSVKFGHGDGSAYLFDPDIYTDGRISV 393
Query: 177 YQVDKVLLPWDLFGAKPPAPAPAPEKPKKKKADAVADG 214
+D VL P + + PA P P KK G
Sbjct: 394 QGIDGVLFPKE----ETPATEIKPAAPVVKKVSKSRRG 427
Score = 33.1 bits (74), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 73/165 (44%), Gaps = 17/165 (10%)
Query: 26 AQPAAAPAPGPPGPTNVTKVLEKAGQFTLFIRLLKATSVADQIDHQLNDTNNGMTLFAPT 85
A P P PG +V L + +T L++ + ++ + N +T+FAP
Sbjct: 23 ALPDNKPVPGQINSNSVLVALLDS-HYTELAELVEKALLLQTLEEAVGKHN--ITIFAPR 79
Query: 86 DNAFSS-----LSSGTLNSLNDQEKVALIQFHVIPTYVSLSQFQTVSNPLRTNAGDSSRF 140
++A S L N + +L+ FH++P ++ Q+ ++S+ RT + D
Sbjct: 80 NDALERNLDPLFKSFLLEPRNLKSLQSLLMFHILPKRITSPQWPSLSHHHRTLSNDH--- 136
Query: 141 EYPLNVTTFGNSVNISSGITNTSVSGTVYTDGQLAVYQVDKVLLP 185
L++T N++ + S + DG ++ ++++L+P
Sbjct: 137 ---LHLTVDVNTLKVDSAEI-IRPDDVIRPDG--IIHGIERLLIP 175
>sp|Q93W32|FLA18_ARATH Fasciclin-like arabinogalactan protein 18 OS=Arabidopsis thaliana
GN=FLA18 PE=2 SV=1
Length = 462
Score = 45.4 bits (106), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 75/173 (43%), Gaps = 7/173 (4%)
Query: 58 LLKATSVADQIDHQLNDTNNGMTLFAPTDNAFSSLSSGTLNSLNDQEKVALIQFHVIPTY 117
L+ TS+A ++ +L +T+ AP D A L++ L+ E++ + +H+IP Y
Sbjct: 291 LVNLTSLATEMG-RLVSEGYVLTVLAPNDEAMGKLTTDQLSEPGAPEQI--MYYHIIPEY 347
Query: 118 VSLSQFQTVSNPLRTNAGDSSRFEYPLNVTTFGNSVNISSGITNTSV-SGTVYTDGQLAV 176
+ ++ RF + + SV SG + + +YTDG+++V
Sbjct: 348 QTEESMYNSVRRFGKVKYETLRFPHKVGAKEADGSVKFGSGDRSAYLFDPDIYTDGRISV 407
Query: 177 YQVDKVLLP---WDLFGAKPPAPAPAPEKPKKKKADAVADGPDGKVDDSSAMS 226
+D VL P + KP P +P++ K VA G + S +S
Sbjct: 408 QGIDGVLFPEEKEEETVKKPTGPVKKVVQPRRGKLLEVACSMLGAIGKDSYLS 460
>sp|Q9FT45|FLA15_ARATH Fasciclin-like arabinogalactan protein 15 OS=Arabidopsis thaliana
GN=FLA15 PE=2 SV=1
Length = 436
Score = 45.1 bits (105), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 71/160 (44%), Gaps = 9/160 (5%)
Query: 58 LLKATSVADQIDHQLNDTNNGMTLFAPTDNAFSSLSSGTLNSLNDQEKVALIQFHVIPTY 117
L+ TS+A ++ +L +T+ AP D A + L++ L+ E++ + +H+IP Y
Sbjct: 269 LVNLTSLATEMG-RLVSEGYVLTVLAPNDEAMAKLTTDQLSEPGAPEQI--MYYHIIPEY 325
Query: 118 VSLSQFQTVSNPLRTNAGDSSRFEYPLNVTTFGNSVNISSGITNTSV-SGTVYTDGQLAV 176
+ DS RF + + SV G + + +YTDG+++V
Sbjct: 326 QTEESMYNSVRRFGKIRYDSLRFPHKVEAQEADGSVKFGHGDGSAYLFDPDIYTDGRISV 385
Query: 177 YQVDKVLLPWDLFGAKPPAPAP----APEKPKKKKADAVA 212
+D VL P + + P AP KP++ K VA
Sbjct: 386 QGIDGVLFPEEKTPVEKKTGVPVVKKAP-KPRRGKLMEVA 424
>sp|Q66GR0|FLA17_ARATH Fasciclin-like arabinogalactan protein 17 OS=Arabidopsis thaliana
GN=FLA17 PE=2 SV=1
Length = 458
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 60/131 (45%), Gaps = 4/131 (3%)
Query: 58 LLKATSVADQIDHQLNDTNNGMTLFAPTDNAFSSLSSGTLNSLNDQEKVALIQFHVIPTY 117
L+ TS+A ++ +L +T+ AP D A + L++ L+ E++ + +H+IP Y
Sbjct: 288 LVNLTSLATEMG-RLVSEGYVLTVLAPNDEAMAKLTTDQLSEPGAPEQI--VYYHIIPEY 344
Query: 118 VSLSQFQTVSNPLRTNAGDSSRFEYPLNVTTFGNSVNISSGITNTSV-SGTVYTDGQLAV 176
+ D+ RF + + SV G + + +YTDG+++V
Sbjct: 345 QTEESMYNSVRRFGKVKFDTLRFPHKVAAKEADGSVKFGDGEKSAYLFDPDIYTDGRISV 404
Query: 177 YQVDKVLLPWD 187
+D VL P +
Sbjct: 405 QGIDGVLFPQE 415
>sp|Q62009|POSTN_MOUSE Periostin OS=Mus musculus GN=Postn PE=1 SV=2
Length = 838
Score = 42.7 bits (99), Expect = 0.002, Method: Composition-based stats.
Identities = 44/160 (27%), Positives = 76/160 (47%), Gaps = 28/160 (17%)
Query: 37 PGPTNVTKVLEKAGQFTLFIRLLKATSVADQIDHQLNDTNNGMTLFAPTDNAFSSLSS-- 94
P ++ L + +F++F+ LL+A + D + Q D TLFAPT++AF ++S
Sbjct: 496 PAEKSLHDKLRQDKRFSIFLSLLEAADLKDLLT-QPGD----WTLFAPTNDAFKGMTSEE 550
Query: 95 -----GTLNSLNDQEKVALIQFHVIP-TYVSLSQFQTVSNPLRTNAGDSSRFEYPLNVTT 148
G N+L + +I +H+ P Y+ V+N L+T G S + +N T
Sbjct: 551 RELLIGDKNALQN-----IILYHLTPGVYIGKGFEPGVTNILKTTQG-SKIYLKGVNETL 604
Query: 149 FGNSVNISSGITNTSVSGTVYTDGQLAVYQVDKVLLPWDL 188
N + + S + T+G ++ VDK+L P D+
Sbjct: 605 LVNEL-------KSKESDIMTTNG--VIHVVDKLLYPADI 635
Score = 36.2 bits (82), Expect = 0.20, Method: Composition-based stats.
Identities = 30/108 (27%), Positives = 55/108 (50%), Gaps = 12/108 (11%)
Query: 80 TLFAPTDNAFSSLSSGTLNSL--NDQEKVALIQFHVIPTYVSLSQFQTVSNPLRTNAGDS 137
TLFAPT+ AF L G L + + AL+++H++ T + S+ T T G++
Sbjct: 272 TLFAPTNEAFEKLPRGVLERIMGDKVASEALMKYHILNT-LQCSEAITGGAVFETMEGNT 330
Query: 138 SRFEYPLNVTTFGNSVNISSGITNTSVSGTVYTDGQLAVYQVDKVLLP 185
+ + G+S++I +GI + V +G ++ +D+VL+P
Sbjct: 331 ------IEIGCEGDSISI-NGIKMVNKKDIVTKNG--VIHLIDEVLIP 369
>sp|Q8WWQ8|STAB2_HUMAN Stabilin-2 OS=Homo sapiens GN=STAB2 PE=1 SV=3
Length = 2551
Score = 40.8 bits (94), Expect = 0.009, Method: Composition-based stats.
Identities = 30/125 (24%), Positives = 61/125 (48%), Gaps = 9/125 (7%)
Query: 51 QFTLFIRLLKATSVADQIDHQLNDTNNGMTLFAPTDNAFSSLSSGTLNSL----NDQEKV 106
+++ F LL+ T++ +D + T+F P + A +++ GTL+ L ++ +
Sbjct: 527 RYSKFRSLLEETNLGHALDE--DGVGGPYTIFVPNNEALNNMKDGTLDYLLSPEGSRKLL 584
Query: 107 ALIQFHVIPTYVSLSQFQTVSNP-LRTNAGDSSRFEYPLNVTTFGNSVNISSGITNTSVS 165
L+++H++P + L +S P +R+ A +F N N V + I T+ +
Sbjct: 585 ELVRYHIVP-FTQLEVATLISTPHIRSMANQLIQFNTTDNGQILANDVAMEE-IEITAKN 642
Query: 166 GTVYT 170
G +YT
Sbjct: 643 GRIYT 647
>sp|Q95215|BGH3_RABIT Transforming growth factor-beta-induced protein ig-h3
OS=Oryctolagus cuniculus GN=TGFBI PE=2 SV=2
Length = 683
Score = 40.0 bits (92), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 84/180 (46%), Gaps = 33/180 (18%)
Query: 36 PPGPTNVTKVLEKAGQFTLFIRLLKATSVADQIDHQLNDTNNGMTLFAPTDNAFSSLSSG 95
PP T V VL+ +F++ + ++ + + ++ + T+FAPT+ AF +L G
Sbjct: 500 PPSGT-VMDVLKGDNRFSMLVAAIQFRRLTETLNRE-----GAYTVFAPTNEAFQALPPG 553
Query: 96 TLNSL--NDQEKVALIQFHVIPTYVSLSQFQTVSNPLRTNAGDSSRFEYPLNVTTFGNSV 153
LN L N +E ++++HV + T+ L++ GD L V++ N+V
Sbjct: 554 ELNKLLGNAKELADILKYHVGEEILVSGGIGTLVR-LKSLQGDK------LEVSSKNNAV 606
Query: 154 NISSGITNTSVSGTVYTDGQLAVYQVDKVLLPWDLFGAKPPAPAPAPEKPKKKKADAVAD 213
+++ + S + T+G VY + VL +PPA P +++ D +AD
Sbjct: 607 SVNK--EPVAESDIMATNG--VVYAITSVL--------QPPANRP------QERGDELAD 648
>sp|Q15063|POSTN_HUMAN Periostin OS=Homo sapiens GN=POSTN PE=1 SV=2
Length = 836
Score = 38.1 bits (87), Expect = 0.065, Method: Composition-based stats.
Identities = 42/154 (27%), Positives = 74/154 (48%), Gaps = 18/154 (11%)
Query: 37 PGPTNVTKVLEKAGQFTLFIRLLKATSVADQIDHQLNDTNNGMTLFAPTDNAFSSLSSGT 96
P ++ + L++ +F+ F+ LL+A + + + Q D TLF PT++AF ++S
Sbjct: 494 PAEKSLHEKLKQDKRFSTFLSLLEAADLKELLT-QPGD----WTLFVPTNDAFKGMTSEE 548
Query: 97 LNSL-NDQEKVA-LIQFHVIPTYVSLSQFQT-VSNPLRTNAGDSSRFEYPLNVTTFGNSV 153
L D+ + +I +H+ P F+ V+N L+T G S F +N T N +
Sbjct: 549 KEILIRDKNALQNIILYHLTPGVFIGKGFEPGVTNILKTTQG-SKIFLKEVNDTLLVNEL 607
Query: 154 NISSGITNTSVSGTVYTDGQLAVYQVDKVLLPWD 187
+ S + T+G ++ VDK+L P D
Sbjct: 608 -------KSKESDIMTTNG--VIHVVDKLLYPAD 632
Score = 33.1 bits (74), Expect = 1.7, Method: Composition-based stats.
Identities = 46/185 (24%), Positives = 79/185 (42%), Gaps = 25/185 (13%)
Query: 15 LFLLHCTNTVVAQPAAAPAPGPPGPTN-----VTKVLEKAG-QFTLFIRL------LKAT 62
LF+ H N VV A G TN + +VL + G FI +A
Sbjct: 194 LFINHYPNGVVTVNCARIIHGNQIATNGVVHVIDRVLTQIGTSIQDFIEAEDDLSSFRAA 253
Query: 63 SVADQIDHQLNDTNNGMTLFAPTDNAFSSLSSGTLNSL--NDQEKVALIQFHVIPTYVSL 120
++ I L + TLFAPT+ AF L G L + + AL+++H++ T +
Sbjct: 254 AITSDILEALG-RDGHFTLFAPTNEAFEKLPRGVLERIMGDKVASEALMKYHILNT-LQC 311
Query: 121 SQFQTVSNPLRTNAGDSSRFEYPLNVTTFGNSVNISSGITNTSVSGTVYTDGQLAVYQVD 180
S+ T G++ + + G+S+ + +GI + V +G ++ +D
Sbjct: 312 SESIMGGAVFETLEGNT------IEIGCDGDSITV-NGIKMVNKKDIVTNNG--VIHLID 362
Query: 181 KVLLP 185
+VL+P
Sbjct: 363 QVLIP 367
>sp|P0A670|MP83_MYCTU Cell surface lipoprotein MPT83 OS=Mycobacterium tuberculosis
GN=mpt83 PE=4 SV=1
Length = 220
Score = 36.6 bits (83), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 56/122 (45%), Gaps = 19/122 (15%)
Query: 69 DHQLNDTNNG--MTLFAPTDNAFSSLSSGTLNSLNDQEKV--ALIQFHVIPTYVSLSQFQ 124
D L DT NG T+FAPT+ AF L + T++ L K+ +++ +HVI S S+
Sbjct: 110 DVNLVDTLNGGEYTVFAPTNAAFDKLPAATIDQLKTDAKLLSSILTYHVIAGQASPSRID 169
Query: 125 TVSNPLRTNAGDSSRFEYPLNVTTFGNSVNISSGITNTS-VSGTVYTDGQLAVYQVDKVL 183
L+ ++T G ++ + N V G V+T VY +D VL
Sbjct: 170 GTHQTLQG-----------ADLTVIGARDDLM--VNNAGLVCGGVHT-ANATVYMIDTVL 215
Query: 184 LP 185
+P
Sbjct: 216 MP 217
>sp|C1AFY9|MP83_MYCBT Cell surface lipoprotein MPB83 OS=Mycobacterium bovis (strain BCG /
Tokyo 172 / ATCC 35737 / TMC 1019) GN=mpb83 PE=1 SV=1
Length = 220
Score = 36.6 bits (83), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 56/122 (45%), Gaps = 19/122 (15%)
Query: 69 DHQLNDTNNG--MTLFAPTDNAFSSLSSGTLNSLNDQEKV--ALIQFHVIPTYVSLSQFQ 124
D L DT NG T+FAPT+ AF L + T++ L K+ +++ +HVI S S+
Sbjct: 110 DVNLVDTLNGGEYTVFAPTNAAFDKLPAATIDQLKTDAKLLSSILTYHVIAGQASPSRID 169
Query: 125 TVSNPLRTNAGDSSRFEYPLNVTTFGNSVNISSGITNTS-VSGTVYTDGQLAVYQVDKVL 183
L+ ++T G ++ + N V G V+T VY +D VL
Sbjct: 170 GTHQTLQG-----------ADLTVIGARDDLM--VNNAGLVCGGVHT-ANATVYMIDTVL 215
Query: 184 LP 185
+P
Sbjct: 216 MP 217
>sp|P0CAX7|MP83_MYCBO Cell surface lipoprotein MPB83 OS=Mycobacterium bovis (strain ATCC
BAA-935 / AF2122/97) GN=mpb83 PE=4 SV=1
Length = 220
Score = 36.6 bits (83), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 56/122 (45%), Gaps = 19/122 (15%)
Query: 69 DHQLNDTNNG--MTLFAPTDNAFSSLSSGTLNSLNDQEKV--ALIQFHVIPTYVSLSQFQ 124
D L DT NG T+FAPT+ AF L + T++ L K+ +++ +HVI S S+
Sbjct: 110 DVNLVDTLNGGEYTVFAPTNAAFDKLPAATIDQLKTDAKLLSSILTYHVIAGQASPSRID 169
Query: 125 TVSNPLRTNAGDSSRFEYPLNVTTFGNSVNISSGITNTS-VSGTVYTDGQLAVYQVDKVL 183
L+ ++T G ++ + N V G V+T VY +D VL
Sbjct: 170 GTHQTLQG-----------ADLTVIGARDDLM--VNNAGLVCGGVHT-ANATVYMIDTVL 215
Query: 184 LP 185
+P
Sbjct: 216 MP 217
>sp|P0A668|MP70_MYCTU Immunogenic protein MPT70 OS=Mycobacterium tuberculosis GN=mpt70
PE=1 SV=1
Length = 193
Score = 35.8 bits (81), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 65/129 (50%), Gaps = 19/129 (14%)
Query: 63 SVADQIDHQLN--DT-NNGM-TLFAPTDNAFSSLSSGTLNSL--NDQEKVALIQFHVIPT 116
+++ Q++ Q+N DT N+G T+FAPT+ AFS L + T++ L N +++ +HV+
Sbjct: 76 ALSGQLNPQVNLVDTLNSGQYTVFAPTNAAFSKLPASTIDELKTNSSLLTSILTYHVVAG 135
Query: 117 YVSLSQFQTVSNPLRTNAGDSSRFEYPLNVTTFGNSVNISSGITNTSVSGTVYTDGQLAV 176
S + L+ G S + VT GNS+ + + V G V T V
Sbjct: 136 QTSPANVVGTRQTLQ---GAS------VTVTGQGNSLKVGNADV---VCGGVST-ANATV 182
Query: 177 YQVDKVLLP 185
Y +D VL+P
Sbjct: 183 YMIDSVLMP 191
>sp|P0A669|MP70_MYCBO Immunogenic protein MPB70 OS=Mycobacterium bovis (strain ATCC
BAA-935 / AF2122/97) GN=mpb70 PE=1 SV=1
Length = 193
Score = 35.8 bits (81), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 65/129 (50%), Gaps = 19/129 (14%)
Query: 63 SVADQIDHQLN--DT-NNGM-TLFAPTDNAFSSLSSGTLNSL--NDQEKVALIQFHVIPT 116
+++ Q++ Q+N DT N+G T+FAPT+ AFS L + T++ L N +++ +HV+
Sbjct: 76 ALSGQLNPQVNLVDTLNSGQYTVFAPTNAAFSKLPASTIDELKTNSSLLTSILTYHVVAG 135
Query: 117 YVSLSQFQTVSNPLRTNAGDSSRFEYPLNVTTFGNSVNISSGITNTSVSGTVYTDGQLAV 176
S + L+ G S + VT GNS+ + + V G V T V
Sbjct: 136 QTSPANVVGTRQTLQ---GAS------VTVTGQGNSLKVGNADV---VCGGVST-ANATV 182
Query: 177 YQVDKVLLP 185
Y +D VL+P
Sbjct: 183 YMIDSVLMP 191
>sp|Q8K3P4|MSI1H_RAT RNA-binding protein Musashi homolog 1 OS=Rattus norvegicus GN=Msi1
PE=2 SV=1
Length = 362
Score = 34.7 bits (78), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 32/144 (22%), Positives = 54/144 (37%), Gaps = 12/144 (8%)
Query: 54 LFIRLLKATSVADQIDH---QLNDTNNGMTLFAPTDNAFSSLSSGTLNSLNDQEKVALIQ 110
+F+ L + + + H Q ++ M +F T N T S + EKV I
Sbjct: 111 IFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIH 170
Query: 111 FHVI---PTYVSLSQFQTVSNPLRTNAGDSSRFEYPLNVTTFGNSVNISSGITNTSVSGT 167
FH I +Q + V +P + G S Y ++ G + G T+ +
Sbjct: 171 FHEINNKMVECKKAQPKEVMSPTGSARGRSRVMPYGMDAFMLGIGMLGYPGFQATTYASR 230
Query: 168 VYTD------GQLAVYQVDKVLLP 185
YT Q ++V++ LP
Sbjct: 231 SYTGLAPGYTYQFPEFRVERTPLP 254
>sp|O11780|BGH3_PIG Transforming growth factor-beta-induced protein ig-h3 OS=Sus scrofa
GN=TGFBI PE=1 SV=1
Length = 683
Score = 33.9 bits (76), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 43/80 (53%), Gaps = 8/80 (10%)
Query: 36 PPGPTNVTKVLEKAGQFTLFIRLLKATSVADQIDHQLNDTNNGMTLFAPTDNAFSSLSSG 95
PP T V VL+ +F++ + +++ + + ++ + T+FAPT+ AF +L G
Sbjct: 500 PPMGT-VMDVLKGDNRFSMLVAAIQSAGLTETLNRE-----GVYTVFAPTNEAFQALPLG 553
Query: 96 TLNSL--NDQEKVALIQFHV 113
N L N +E ++++HV
Sbjct: 554 ERNKLLGNAKELANILKYHV 573
>sp|P73392|Y1735_SYNY3 Uncharacterized protein sll1735 OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=sll1735 PE=4 SV=1
Length = 133
Score = 32.7 bits (73), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 7/89 (7%)
Query: 45 VLEKAGQFTLFIRLLKATSVADQIDHQLNDTNNGMTLFAPTDNAFSSLSSGTLNSL--ND 102
++E A F L+ A + A+ +D + + T+FAPTD AF+ L GT+ +L N
Sbjct: 4 IVEIAVSDERFSTLVTAVTAANLVD--VLQSPGPFTVFAPTDTAFAKLPPGTITTLVQNI 61
Query: 103 QEKVALIQFHVIP---TYVSLSQFQTVSN 128
+ ++ +HV+ T L + TV +
Sbjct: 62 PQLARILTYHVVAGKFTQADLCRLSTVDS 90
>sp|P37275|ZEB1_HUMAN Zinc finger E-box-binding homeobox 1 OS=Homo sapiens GN=ZEB1 PE=1
SV=2
Length = 1124
Score = 32.3 bits (72), Expect = 3.7, Method: Composition-based stats.
Identities = 29/105 (27%), Positives = 41/105 (39%), Gaps = 18/105 (17%)
Query: 121 SQFQTV------SNPLRTNAGDSSRFEYPLNVTT-----FGNSVNISSGITNTSVSGTVY 169
SQ Q V NP+ TN+ S + L V + F VN S+ + G +
Sbjct: 483 SQLQVVPQNLKKENPVATNSCKSEKLPEDLTVKSEKDKSFEGGVNDSTCLLCDDCPGDIN 542
Query: 170 TDGQLAVYQVDKVLLPWDLFGAKPPAPAPAPEKPKKKKADAVADG 214
+L Y + + P PP PA EKP+ + A DG
Sbjct: 543 ALPELKHYDLKQPTQP-------PPLPAAEAEKPESSVSSATGDG 580
>sp|P82198|BGH3_MOUSE Transforming growth factor-beta-induced protein ig-h3 OS=Mus
musculus GN=Tgfbi PE=2 SV=1
Length = 683
Score = 31.6 bits (70), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 85/181 (46%), Gaps = 35/181 (19%)
Query: 36 PPGPTNVTKVLEKAGQFTLFIRLLKATSVADQIDHQLNDTNNGMTLFAPTDNAFSSLSSG 95
PP T V VL+ +F++ + +++ + + ++ + T+FAPT+ AF ++
Sbjct: 500 PPMGT-VMDVLKGDNRFSMLVAAIQSAGLMEILNRE-----GVYTVFAPTNEAFQAMPPE 553
Query: 96 TLNSL--NDQEKVALIQFHVIPTYVSLSQFQTVSNPLRTNAGDSSRFEYPLNVTTFGNSV 153
LN L N +E ++++H I + +S L++ GD L V++ N V
Sbjct: 554 ELNKLLANAKELTNILKYH-IGDEILVSGGIGALVRLKSLQGDK------LEVSSKNNVV 606
Query: 154 NISSG-ITNTSVSGTVYTDGQLAVYQVDKVLLPWDLFGAKPPAPAPAPEKPKKKKADAVA 212
+++ + T + + T+G VY ++ VL +PPA P +++ D +A
Sbjct: 607 SVNKEPVAETDI---MATNG--VVYAINTVL--------QPPANRP------QERGDELA 647
Query: 213 D 213
D
Sbjct: 648 D 648
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.131 0.376
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 92,006,620
Number of Sequences: 539616
Number of extensions: 3846428
Number of successful extensions: 19683
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 48
Number of HSP's that attempted gapping in prelim test: 19429
Number of HSP's gapped (non-prelim): 265
length of query: 248
length of database: 191,569,459
effective HSP length: 114
effective length of query: 134
effective length of database: 130,053,235
effective search space: 17427133490
effective search space used: 17427133490
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)