Query 025799
Match_columns 248
No_of_seqs 324 out of 2334
Neff 6.4
Searched_HMMs 29240
Date Mon Mar 25 17:51:26 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025799.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025799hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2och_A Hypothetical protein DN 99.9 9.5E-23 3.3E-27 147.9 8.0 70 1-73 4-73 (73)
2 2dn9_A DNAJ homolog subfamily 99.9 1.1E-22 3.8E-27 149.5 8.1 73 3-75 5-77 (79)
3 1hdj_A Human HSP40, HDJ-1; mol 99.9 2.2E-22 7.4E-27 147.3 8.4 73 4-77 2-74 (77)
4 1bq0_A DNAJ, HSP40; chaperone, 99.9 7.6E-23 2.6E-27 158.0 5.3 74 4-77 2-75 (103)
5 2ej7_A HCG3 gene; HCG3 protein 99.9 7.1E-22 2.4E-26 146.1 8.1 73 4-76 8-81 (82)
6 2ctp_A DNAJ homolog subfamily 99.9 8.7E-22 3E-26 144.4 8.3 72 3-75 5-76 (78)
7 2ctq_A DNAJ homolog subfamily 99.9 4.1E-22 1.4E-26 156.2 6.0 75 2-76 17-91 (112)
8 2cug_A Mkiaa0962 protein; DNAJ 99.9 1.2E-21 4.2E-26 147.1 8.3 71 3-74 15-85 (88)
9 2ctw_A DNAJ homolog subfamily 99.9 2.1E-21 7E-26 151.6 9.6 71 3-73 15-85 (109)
10 2o37_A Protein SIS1; HSP40, J- 99.8 2.4E-21 8.2E-26 146.7 7.7 72 1-75 4-75 (92)
11 2dmx_A DNAJ homolog subfamily 99.8 3.3E-21 1.1E-25 145.7 7.1 74 4-77 8-82 (92)
12 2yua_A Williams-beuren syndrom 99.8 5.7E-21 2E-25 146.5 8.3 70 3-72 15-84 (99)
13 2lgw_A DNAJ homolog subfamily 99.8 2.7E-21 9.1E-26 148.6 6.2 73 5-77 2-75 (99)
14 2ctr_A DNAJ homolog subfamily 99.8 4.3E-21 1.5E-25 144.1 7.1 71 3-74 5-75 (88)
15 1wjz_A 1700030A21RIK protein; 99.8 3.4E-21 1.2E-25 145.8 6.4 72 2-73 13-90 (94)
16 3hho_A CO-chaperone protein HS 99.8 3.1E-20 1.1E-24 156.1 12.9 156 3-175 2-171 (174)
17 3apq_A DNAJ homolog subfamily 99.8 1.3E-20 4.4E-25 160.0 8.5 73 5-77 2-74 (210)
18 2qsa_A DNAJ homolog DNJ-2; J-d 99.8 5E-21 1.7E-25 149.1 4.6 72 2-73 12-87 (109)
19 1fpo_A HSC20, chaperone protei 99.8 2.1E-19 7.2E-24 150.7 13.6 155 5-177 1-169 (171)
20 3bvo_A CO-chaperone protein HS 99.8 1.9E-18 6.7E-23 149.0 11.9 86 4-89 42-137 (207)
21 2l6l_A DNAJ homolog subfamily 99.8 3.6E-19 1.2E-23 146.6 6.5 70 3-72 8-83 (155)
22 3lz8_A Putative chaperone DNAJ 99.8 3.6E-20 1.2E-24 169.9 0.0 70 3-73 26-95 (329)
23 2ys8_A RAB-related GTP-binding 99.7 3.5E-19 1.2E-23 134.3 3.5 62 3-65 25-86 (90)
24 1gh6_A Large T antigen; tumor 99.7 6.6E-20 2.3E-24 144.4 -1.0 85 5-102 8-94 (114)
25 3uo3_A J-type CO-chaperone JAC 99.7 1E-17 3.4E-22 141.8 8.4 64 4-70 10-80 (181)
26 2pf4_E Small T antigen; PP2A, 99.7 8.9E-19 3.1E-23 147.2 -0.1 64 5-72 11-76 (174)
27 1faf_A Large T antigen; J doma 99.7 4.8E-18 1.7E-22 125.3 3.8 65 5-74 11-77 (79)
28 1iur_A KIAA0730 protein; DNAJ 99.7 8.1E-18 2.8E-22 126.7 2.4 60 5-64 16-76 (88)
29 3apo_A DNAJ homolog subfamily 99.7 7.5E-18 2.6E-22 168.0 0.8 75 3-77 19-93 (780)
30 2qwo_B Putative tyrosine-prote 99.7 2.2E-17 7.5E-22 125.3 2.5 56 5-60 33-91 (92)
31 1n4c_A Auxilin; four helix bun 99.6 2E-17 7E-22 139.8 1.7 63 5-67 117-182 (182)
32 3ag7_A Putative uncharacterize 99.6 8.2E-17 2.8E-21 125.1 3.1 59 3-62 39-104 (106)
33 2guz_A Mitochondrial import in 99.6 3.1E-16 1.1E-20 113.2 2.2 56 5-64 14-70 (71)
34 2y4t_A DNAJ homolog subfamily 99.1 5.4E-11 1.8E-15 107.2 4.5 66 4-69 381-449 (450)
35 2guz_B Mitochondrial import in 98.7 7.6E-09 2.6E-13 73.3 4.3 51 6-60 5-58 (65)
36 1ny9_A Transcriptional activat 40.4 51 0.0017 25.2 5.6 53 12-72 71-124 (143)
37 2cqn_A Formin-binding protein 27.7 1.5E+02 0.0052 20.6 5.8 53 17-70 6-61 (77)
38 1ceu_A Protein (HIV-1 regulato 27.2 78 0.0027 20.7 3.7 29 159-187 16-44 (51)
No 1
>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A
Probab=99.88 E-value=9.5e-23 Score=147.90 Aligned_cols=70 Identities=57% Similarity=0.888 Sum_probs=63.2
Q ss_pred CCCCCccccccCcCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHcCCHhHHHHHhhcCCC
Q 025799 1 MVKDTAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDKHGKE 73 (248)
Q Consensus 1 mv~~~~yY~iLgV~~~as~~eIkkaYrkla~k~HPDkn~~~~~a~~~f~~I~eAY~vLsdp~~R~~YD~~G~~ 73 (248)
|+.+.+||+||||+++++..+||+|||++++++|||++++. .+.|+.|++||++|+||.+|..||++|.+
T Consensus 4 m~~~~~~y~iLgl~~~a~~~eIk~ayr~l~~~~HPD~~~~~---~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~ 73 (73)
T 2och_A 4 MVKETGYYDVLGVKPDASDNELKKAYRKMALKFHPDKNPDG---AEQFKQISQAYEVLSDEKKRQIYDQGGEE 73 (73)
T ss_dssp --CCCCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCTTC---HHHHHHHHHHHHHHTSHHHHHHHHHTC--
T ss_pred ccCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCcCH---HHHHHHHHHHHHHHCCHHHHHHHHhcCCC
Confidence 78899999999999999999999999999999999999753 57899999999999999999999999963
No 2
>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.87 E-value=1.1e-22 Score=149.46 Aligned_cols=73 Identities=51% Similarity=0.760 Sum_probs=68.8
Q ss_pred CCCccccccCcCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHcCCHhHHHHHhhcCCCCC
Q 025799 3 KDTAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDKHGKEGI 75 (248)
Q Consensus 3 ~~~~yY~iLgV~~~as~~eIkkaYrkla~k~HPDkn~~~~~a~~~f~~I~eAY~vLsdp~~R~~YD~~G~~~~ 75 (248)
...|||+||||+++++..+||+|||++++++|||++++++.+.+.|+.|++||++|+||.+|..||.+|..+.
T Consensus 5 ~~~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~~ 77 (79)
T 2dn9_A 5 SSGDYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEVKRKQYDAYGSGPS 77 (79)
T ss_dssp CCSCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCSSCTTHHHHHHHHHHHHHHHHSHHHHHHHHHSCCCCS
T ss_pred CCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHhccCcCC
Confidence 3579999999999999999999999999999999999888899999999999999999999999999997653
No 3
>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.87 E-value=2.2e-22 Score=147.34 Aligned_cols=73 Identities=48% Similarity=0.793 Sum_probs=67.5
Q ss_pred CCccccccCcCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHcCCHhHHHHHhhcCCCCCCC
Q 025799 4 DTAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDKHGKEGIPQ 77 (248)
Q Consensus 4 ~~~yY~iLgV~~~as~~eIkkaYrkla~k~HPDkn~~~~~a~~~f~~I~eAY~vLsdp~~R~~YD~~G~~~~~~ 77 (248)
..|||+||||++++|.++||+|||++++++|||+++ ++.+.+.|+.|++||++|+||.+|..||.+|..++..
T Consensus 2 ~~~~y~iLgv~~~as~~~Ik~ayr~l~~~~HPD~~~-~~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~~ 74 (77)
T 1hdj_A 2 GKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNK-EPGAEEKFKEIAEAYDVLSDPRKREIFDRYGEEGLKG 74 (77)
T ss_dssp CCCSHHHHTCCTTCCHHHHHHHHHHHHHTTCTTTCC-CTTHHHHHHHHHHHHHHTTCHHHHHHHHHTCGGGCCS
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCC-CccHHHHHHHHHHHHHHHCCHHHHHHHHHHccccccc
Confidence 368999999999999999999999999999999997 4678899999999999999999999999999876553
No 4
>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A
Probab=99.87 E-value=7.6e-23 Score=157.97 Aligned_cols=74 Identities=45% Similarity=0.734 Sum_probs=69.5
Q ss_pred CCccccccCcCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHcCCHhHHHHHhhcCCCCCCC
Q 025799 4 DTAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDKHGKEGIPQ 77 (248)
Q Consensus 4 ~~~yY~iLgV~~~as~~eIkkaYrkla~k~HPDkn~~~~~a~~~f~~I~eAY~vLsdp~~R~~YD~~G~~~~~~ 77 (248)
..+||+||||++++|.++||+|||++++++|||++++++.+.++|+.|++||++|+||.+|..||.+|..+...
T Consensus 2 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~~~ 75 (103)
T 1bq0_A 2 KQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAFEQ 75 (103)
T ss_dssp CCCSTTTTSSCSSCCHHHHHHHHHHHHTTTCTTTCTTTCTHHHHHHHHTTTTTSTTCSHHHHHTTTSTTTSSCS
T ss_pred CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHHhhhhhcc
Confidence 46899999999999999999999999999999999877888999999999999999999999999999887653
No 5
>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.86 E-value=7.1e-22 Score=146.15 Aligned_cols=73 Identities=45% Similarity=0.665 Sum_probs=67.2
Q ss_pred CCccccccCcCCCCCHHHHHHHHHHHHHHhCCCCCCCCh-hHHHHHHHHHHHHHHcCCHhHHHHHhhcCCCCCC
Q 025799 4 DTAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDP-KAAKNFQVLGEAYQVLSDPEKREAYDKHGKEGIP 76 (248)
Q Consensus 4 ~~~yY~iLgV~~~as~~eIkkaYrkla~k~HPDkn~~~~-~a~~~f~~I~eAY~vLsdp~~R~~YD~~G~~~~~ 76 (248)
..+||+||||+++++.++||+|||++++++|||++++.+ .+.+.|+.|++||++|+||.+|..||.+|..+..
T Consensus 8 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~~~ 81 (82)
T 2ej7_A 8 MVDYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDAKKRDIYDRYGSGPSS 81 (82)
T ss_dssp SCCHHHHTTCCTTCCHHHHHHHHHHHHTTSCTTTCSTTHHHHHHHHHHHHHHHHHHSSTTHHHHHHHTCCCSCC
T ss_pred CcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHHCCHHHHHHHHHcCccccC
Confidence 469999999999999999999999999999999998653 5788999999999999999999999999987643
No 6
>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.86 E-value=8.7e-22 Score=144.45 Aligned_cols=72 Identities=46% Similarity=0.751 Sum_probs=67.3
Q ss_pred CCCccccccCcCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHcCCHhHHHHHhhcCCCCC
Q 025799 3 KDTAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDKHGKEGI 75 (248)
Q Consensus 3 ~~~~yY~iLgV~~~as~~eIkkaYrkla~k~HPDkn~~~~~a~~~f~~I~eAY~vLsdp~~R~~YD~~G~~~~ 75 (248)
...|||+||||+++++.++||+|||++++++|||+++ .+.+.+.|+.|++||++|+||.+|..||.+|..+.
T Consensus 5 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~-~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~ 76 (78)
T 2ctp_A 5 SSGDYYEILGVSRGASDEDLKKAYRRLALKFHPDKNH-APGATEAFKAIGTAYAVLSNPEKRKQYDQFGSGPS 76 (78)
T ss_dssp CSCCHHHHHTCCTTCCHHHHHHHHHHHHTTSCTTTCS-SHHHHHHHHHHHHHHHHHTSHHHHHHHHHTCSCSC
T ss_pred CCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCC-CccHHHHHHHHHHHHHHHCCHHHHHHHHHcCcccc
Confidence 4679999999999999999999999999999999997 57789999999999999999999999999997653
No 7
>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.85 E-value=4.1e-22 Score=156.20 Aligned_cols=75 Identities=32% Similarity=0.566 Sum_probs=69.9
Q ss_pred CCCCccccccCcCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHcCCHhHHHHHhhcCCCCCC
Q 025799 2 VKDTAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDKHGKEGIP 76 (248)
Q Consensus 2 v~~~~yY~iLgV~~~as~~eIkkaYrkla~k~HPDkn~~~~~a~~~f~~I~eAY~vLsdp~~R~~YD~~G~~~~~ 76 (248)
....|||+||||+++|+.++||+|||++++++|||++++++.+.+.|+.|++||+||+||.+|..||.+|..+..
T Consensus 17 ~~~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~~~ 91 (112)
T 2ctq_A 17 EDTEDYYTLLGCDELSSVEQILAEFKVRALECHPDKHPENPKAVETFQKLQKAKEILTNEESRARYDHWRRSQMS 91 (112)
T ss_dssp CCCCCHHHHTTCCTTSCHHHHHHHHHHHHHTTCTTTCTTCSTHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHTCS
T ss_pred cCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHhhhhccC
Confidence 346899999999999999999999999999999999998888999999999999999999999999999976643
No 8
>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus}
Probab=99.85 E-value=1.2e-21 Score=147.10 Aligned_cols=71 Identities=49% Similarity=0.670 Sum_probs=66.8
Q ss_pred CCCccccccCcCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHcCCHhHHHHHhhcCCCC
Q 025799 3 KDTAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDKHGKEG 74 (248)
Q Consensus 3 ~~~~yY~iLgV~~~as~~eIkkaYrkla~k~HPDkn~~~~~a~~~f~~I~eAY~vLsdp~~R~~YD~~G~~~ 74 (248)
.+.|||+||||+++++.++||+|||++++++|||+++ ++.+.+.|+.|++||++|+||.+|..||.+|..+
T Consensus 15 ~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~-~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~ 85 (88)
T 2cug_A 15 LDFDPYRVLGVSRTASQADIKKAYKKLAREWHPDKNK-DPGAEDRFIQISKAYEILSNEEKRTNYDHYGSGP 85 (88)
T ss_dssp SSSCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCC-STTHHHHHHHHHHHHHHHHSHHHHHHHHHHTTCC
T ss_pred CCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCC-ChhHHHHHHHHHHHHHHHCCHHHHHHHHHcCCCC
Confidence 4679999999999999999999999999999999997 4678899999999999999999999999999764
No 9
>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.85 E-value=2.1e-21 Score=151.57 Aligned_cols=71 Identities=41% Similarity=0.679 Sum_probs=67.5
Q ss_pred CCCccccccCcCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHcCCHhHHHHHhhcCCC
Q 025799 3 KDTAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDKHGKE 73 (248)
Q Consensus 3 ~~~~yY~iLgV~~~as~~eIkkaYrkla~k~HPDkn~~~~~a~~~f~~I~eAY~vLsdp~~R~~YD~~G~~ 73 (248)
...+||+||||+++|+.++||+|||++++++|||++++++.+.+.|+.|++||+||+||.+|..||.+|..
T Consensus 15 ~~~~~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~g~~ 85 (109)
T 2ctw_A 15 SGESLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDNPEAADKFKEINNAHAILTDATKRNIYDKYGSL 85 (109)
T ss_dssp CSCCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTSTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHTCHH
T ss_pred CCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHcCHHHHHHHHHhccc
Confidence 46799999999999999999999999999999999998888999999999999999999999999999854
No 10
>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae}
Probab=99.84 E-value=2.4e-21 Score=146.72 Aligned_cols=72 Identities=47% Similarity=0.785 Sum_probs=66.8
Q ss_pred CCCCCccccccCcCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHcCCHhHHHHHhhcCCCCC
Q 025799 1 MVKDTAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDKHGKEGI 75 (248)
Q Consensus 1 mv~~~~yY~iLgV~~~as~~eIkkaYrkla~k~HPDkn~~~~~a~~~f~~I~eAY~vLsdp~~R~~YD~~G~~~~ 75 (248)
|+.+.+||+||||+++++.++||+|||++++++|||+++++ .+.|+.|++||++|+||.+|..||.+|..+.
T Consensus 4 m~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~---~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~ 75 (92)
T 2o37_A 4 MVKETKLYDLLGVSPSANEQELKKGYRKAALKYHPDKPTGD---TEKFKEISEAFEILNDPQKREIYDQYGLEAA 75 (92)
T ss_dssp CCSCCHHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTSTTCC---HHHHHHHHHHHHHHTSHHHHHHHHHHCHHHH
T ss_pred cccCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCh---HHHHHHHHHHHHHHCCHHHHHHHHHHCHHHh
Confidence 77889999999999999999999999999999999999764 3699999999999999999999999997553
No 11
>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.84 E-value=3.3e-21 Score=145.66 Aligned_cols=74 Identities=49% Similarity=0.768 Sum_probs=67.9
Q ss_pred CCccccccCcCCCCCHHHHHHHHHHHHHHhCCCCCCCC-hhHHHHHHHHHHHHHHcCCHhHHHHHhhcCCCCCCC
Q 025799 4 DTAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGD-PKAAKNFQVLGEAYQVLSDPEKREAYDKHGKEGIPQ 77 (248)
Q Consensus 4 ~~~yY~iLgV~~~as~~eIkkaYrkla~k~HPDkn~~~-~~a~~~f~~I~eAY~vLsdp~~R~~YD~~G~~~~~~ 77 (248)
..+||+||||+++++.++||+|||+++++||||+++.+ +.+.+.|+.|++||++|+||.+|..||.+|..+...
T Consensus 8 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~~ 82 (92)
T 2dmx_A 8 MANYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSKKRSLYDRAGCDSWRA 82 (92)
T ss_dssp CCCHHHHHTCCTTCCTTHHHHHHHHHHHHTCTTTCSSCSHHHHHHHHHHHHHHHHHHSHHHHHHHHHHCSCSSCC
T ss_pred CcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcccccC
Confidence 46899999999999999999999999999999999865 367899999999999999999999999999876543
No 12
>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.83 E-value=5.7e-21 Score=146.48 Aligned_cols=70 Identities=41% Similarity=0.663 Sum_probs=65.9
Q ss_pred CCCccccccCcCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHcCCHhHHHHHhhcCC
Q 025799 3 KDTAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDKHGK 72 (248)
Q Consensus 3 ~~~~yY~iLgV~~~as~~eIkkaYrkla~k~HPDkn~~~~~a~~~f~~I~eAY~vLsdp~~R~~YD~~G~ 72 (248)
...+||+||||+++|+.++||+|||+++++||||++++++.+.+.|+.|++||+||+||.+|..||....
T Consensus 15 ~~~~~Y~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~l~ 84 (99)
T 2yua_A 15 SRTALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGSAEAAERFTRISQAYVVLGSATLRRKYDRGLL 84 (99)
T ss_dssp CSSHHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCSSCSHHHHHHHHHHHHHHHTTSHHHHHHHHHTCC
T ss_pred CccCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHhcc
Confidence 3579999999999999999999999999999999998888899999999999999999999999999543
No 13
>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens}
Probab=99.83 E-value=2.7e-21 Score=148.64 Aligned_cols=73 Identities=51% Similarity=0.787 Sum_probs=65.0
Q ss_pred CccccccCcCCCCCHHHHHHHHHHHHHHhCCCCCCCC-hhHHHHHHHHHHHHHHcCCHhHHHHHhhcCCCCCCC
Q 025799 5 TAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGD-PKAAKNFQVLGEAYQVLSDPEKREAYDKHGKEGIPQ 77 (248)
Q Consensus 5 ~~yY~iLgV~~~as~~eIkkaYrkla~k~HPDkn~~~-~~a~~~f~~I~eAY~vLsdp~~R~~YD~~G~~~~~~ 77 (248)
.|||+||||+++|+.++||+|||++++++|||++++. +.+.+.|+.|++||++|+||.+|..||.+|..+...
T Consensus 2 ~d~Y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~a~~~f~~I~~AY~vL~d~~~R~~YD~~g~~~~~~ 75 (99)
T 2lgw_A 2 ASYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLTG 75 (99)
T ss_dssp CCHHHHSSSCTTSCHHHHHHHHHHHHHHTSTTTCCSCCHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHC----
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcccccC
Confidence 5899999999999999999999999999999999865 347889999999999999999999999999876543
No 14
>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.83 E-value=4.3e-21 Score=144.10 Aligned_cols=71 Identities=44% Similarity=0.709 Sum_probs=66.6
Q ss_pred CCCccccccCcCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHcCCHhHHHHHhhcCCCC
Q 025799 3 KDTAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDKHGKEG 74 (248)
Q Consensus 3 ~~~~yY~iLgV~~~as~~eIkkaYrkla~k~HPDkn~~~~~a~~~f~~I~eAY~vLsdp~~R~~YD~~G~~~ 74 (248)
...+||+||||+++++.++||+|||++++++|||+++ ++.+.+.|+.|++||++|+||.+|..||.+|..+
T Consensus 5 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~-~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~ 75 (88)
T 2ctr_A 5 SSGSYYDILGVPKSASERQIKKAFHKLAMKYHPDKNK-SPDAEAKFREIAEAYETLSDANRRKEYDTLGHSA 75 (88)
T ss_dssp CCCSHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCC-SHHHHHHHHHHHHHHHHHHSSHHHHHHHHTCHHH
T ss_pred CCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCC-ChHHHHHHHHHHHHHHHHCCHHHHHHHHHhCccc
Confidence 3579999999999999999999999999999999997 6788999999999999999999999999998654
No 15
>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1
Probab=99.83 E-value=3.4e-21 Score=145.82 Aligned_cols=72 Identities=24% Similarity=0.512 Sum_probs=65.7
Q ss_pred CCCCccccccCcCCCCCHHHHHHHHHHHHHHhCCCCCCCC------hhHHHHHHHHHHHHHHcCCHhHHHHHhhcCCC
Q 025799 2 VKDTAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGD------PKAAKNFQVLGEAYQVLSDPEKREAYDKHGKE 73 (248)
Q Consensus 2 v~~~~yY~iLgV~~~as~~eIkkaYrkla~k~HPDkn~~~------~~a~~~f~~I~eAY~vLsdp~~R~~YD~~G~~ 73 (248)
+...+||+||||+++|+..+||+|||+++++||||+++.+ +.+.+.|+.|++||+||+||.+|..||.+...
T Consensus 13 ~~~~~~y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~l~~ 90 (94)
T 1wjz_A 13 TLKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETKKKYDLQRSG 90 (94)
T ss_dssp SSCSCHHHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSHHHHHHHHSCC
T ss_pred CCCCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCChhhhHHHHHHHHHHHHHHHHHCCHHHHHHHHHHccC
Confidence 3467999999999999999999999999999999999753 45789999999999999999999999998764
No 16
>3hho_A CO-chaperone protein HSCB homolog; structural genomics, IDP01304, center for structural genomics of infectious diseases, CSGI; 2.15A {Vibrio cholerae}
Probab=99.83 E-value=3.1e-20 Score=156.14 Aligned_cols=156 Identities=20% Similarity=0.280 Sum_probs=103.0
Q ss_pred CCCccccccCcCCCCC--HHHHHHHHHHHHHHhCCCCCCCChh-----HHHHHHHHHHHHHHcCCHhHHHHHhhc--CCC
Q 025799 3 KDTAYYDVLGVNVDAS--PAEIKKAYYLKARIVHPDKNPGDPK-----AAKNFQVLGEAYQVLSDPEKREAYDKH--GKE 73 (248)
Q Consensus 3 ~~~~yY~iLgV~~~as--~~eIkkaYrkla~k~HPDkn~~~~~-----a~~~f~~I~eAY~vLsdp~~R~~YD~~--G~~ 73 (248)
..+|||+||||+++++ ..+||++||+++++||||++++.+. +.+.|+.|++||+||+||.+|..||.. |.+
T Consensus 2 ~~~d~Y~iLgl~~~a~id~~eIk~aYr~l~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~l~g~~ 81 (174)
T 3hho_A 2 NAMNYFELFGLPIQFELDGSLLSSQFRALQKRFHPDNFATASERDRLMAVQQAAQINDAYQTLKDPLRRAEYLLSLQGIE 81 (174)
T ss_dssp --CCHHHHTTCCSSSCCCHHHHHHHHHHHHHHHCGGGSTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHTTCC
T ss_pred CCCCHHHHcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHccCCC
Confidence 3579999999999998 9999999999999999999987654 668999999999999999999999984 433
Q ss_pred CCCC-CCcchhhhhhhhccccchHHHHhhHHHHHHhhhhhhhhchhhHHHhhHHHHHHHHHHHHHHHHHHHHHHHhcccc
Q 025799 74 GIPQ-DSMVDAAAVFGMIFGSEYFEDYIGQLALATMASVEVEEDKQDIEVYKHKIQEKMRAMQKEREEKLITILKNHLEP 152 (248)
Q Consensus 74 ~~~~-~~~~d~~~~f~~~fg~~~f~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~R~~~La~~L~~rl~~ 152 (248)
.... ....||..+...+--.+.+.+. ....++......+..++....+.....|...+.. ..
T Consensus 82 ~~~e~~~~~d~~fLme~me~rE~le~~---------------~~~~d~~~~l~~l~~~~~~~~~~~~~~l~~~~~~--~d 144 (174)
T 3hho_A 82 MNAEQQTLQDPMFLMEQMELREELESV---------------TACADPEAALVAFDTKVTAMQRHYLAQLQGQLAQ--SE 144 (174)
T ss_dssp CC----CCCCHHHHHHHHHHHHHHHHH---------------TSSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHT--TC
T ss_pred cccccCCCCCHHHHHHHHHHHHHHHHH---------------hhccchHHHHHHHHHHHHHHHHHHHHHHHHHHhc--Cc
Confidence 2222 2344554444333222221110 1112222223455666666667777777777754 23
Q ss_pred ccc----CChHHHHHHHHHHHHHHhhc
Q 025799 153 FVD----GRADEFVKWANAEARRLSGA 175 (248)
Q Consensus 153 ~v~----g~~~~f~~~~~~E~~~L~~~ 175 (248)
|-. ...-.|..++..+++.+...
T Consensus 145 ~~~A~~~~~kL~f~~kl~~~i~~~~~~ 171 (174)
T 3hho_A 145 WLAAADQIRKLKFIAKLKNEVERVEDQ 171 (174)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 322 12346888888888876543
No 17
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.82 E-value=1.3e-20 Score=160.03 Aligned_cols=73 Identities=41% Similarity=0.737 Sum_probs=69.2
Q ss_pred CccccccCcCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHcCCHhHHHHHhhcCCCCCCC
Q 025799 5 TAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDKHGKEGIPQ 77 (248)
Q Consensus 5 ~~yY~iLgV~~~as~~eIkkaYrkla~k~HPDkn~~~~~a~~~f~~I~eAY~vLsdp~~R~~YD~~G~~~~~~ 77 (248)
.|||++|||+++|+.++||+|||++++++|||++++++++.++|+.|++||++|+||.+|+.||++|..+...
T Consensus 2 ~~~y~~l~~~~~a~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~~L~~~~~r~~yd~~~~~~~~~ 74 (210)
T 3apq_A 2 QNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLED 74 (210)
T ss_dssp CCHHHHHTCCTTCCHHHHHHHHHHHHHHHCGGGCTTCTTHHHHHHHHHHHHHHHTSHHHHHHHHHHTTTTCCT
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHhCCHHHHHHHHHhccccccc
Confidence 5899999999999999999999999999999999988889999999999999999999999999999877543
No 18
>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans}
Probab=99.82 E-value=5e-21 Score=149.05 Aligned_cols=72 Identities=33% Similarity=0.462 Sum_probs=66.3
Q ss_pred CCCCccccccCcCCCC-CHHHHHHHHHHHHHHhCCCCCCC---ChhHHHHHHHHHHHHHHcCCHhHHHHHhhcCCC
Q 025799 2 VKDTAYYDVLGVNVDA-SPAEIKKAYYLKARIVHPDKNPG---DPKAAKNFQVLGEAYQVLSDPEKREAYDKHGKE 73 (248)
Q Consensus 2 v~~~~yY~iLgV~~~a-s~~eIkkaYrkla~k~HPDkn~~---~~~a~~~f~~I~eAY~vLsdp~~R~~YD~~G~~ 73 (248)
....+||+||||+++| |.++||+|||++++++|||++++ .+.+.+.|+.|++||++|+||.+|..||.+|..
T Consensus 12 ~~~~~~y~iLgv~~~a~s~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~i~~AY~~L~d~~~R~~YD~~~~~ 87 (109)
T 2qsa_A 12 CGLENCYDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETLKDDEAKTNYDYYLDH 87 (109)
T ss_dssp TTTSCHHHHTTCCGGGCCHHHHHHHHHHHHHHTCGGGCCSHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHC
T ss_pred cCCCCHHHHcCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccccHHHHHHHHHHHHHHHHHCCHHHHHHHHHhccC
Confidence 4578999999999999 99999999999999999999975 355789999999999999999999999999854
No 19
>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1
Probab=99.81 E-value=2.1e-19 Score=150.74 Aligned_cols=155 Identities=17% Similarity=0.248 Sum_probs=99.9
Q ss_pred CccccccCcCCCC--CHHHHHHHHHHHHHHhCCCCCCCChh-----HHHHHHHHHHHHHHcCCHhHHHHHhhcCCCC--C
Q 025799 5 TAYYDVLGVNVDA--SPAEIKKAYYLKARIVHPDKNPGDPK-----AAKNFQVLGEAYQVLSDPEKREAYDKHGKEG--I 75 (248)
Q Consensus 5 ~~yY~iLgV~~~a--s~~eIkkaYrkla~k~HPDkn~~~~~-----a~~~f~~I~eAY~vLsdp~~R~~YD~~G~~~--~ 75 (248)
+|||++|||++++ |..+||++||+++++||||++++.+. +.+.|+.|++||+||+||.+|..||...... .
T Consensus 1 ~d~y~lLgl~~~a~i~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~l~g~~~~ 80 (171)
T 1fpo_A 1 MDYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLLSLHGFDLA 80 (171)
T ss_dssp CHHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHTTTCCTT
T ss_pred CCHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHhcCCCcc
Confidence 4899999999999 99999999999999999999987653 4579999999999999999999999875421 1
Q ss_pred CC-CCcchhhhhhhhccccchHHHHhhHHHHHHhhhhhhhhchhhHHHhhHHHHHHHHHHHHHHHHHHHHHHHhcccccc
Q 025799 76 PQ-DSMVDAAAVFGMIFGSEYFEDYIGQLALATMASVEVEEDKQDIEVYKHKIQEKMRAMQKEREEKLITILKNHLEPFV 154 (248)
Q Consensus 76 ~~-~~~~d~~~~f~~~fg~~~f~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~R~~~La~~L~~rl~~~v 154 (248)
.. ....||..++..+--.+.+++. .. ..+. .....+..++....+..+..|...+... .|-
T Consensus 81 ~e~~~~~d~~fLme~me~rE~lee~------------~~---~~d~-~~l~~l~~~~~~~~~~~~~~l~~~~~~~--~~~ 142 (171)
T 1fpo_A 81 SEQHTVRDTAFLMEQLELREELDEI------------EQ---AKDE-ARLESFIKRVKKMFDTRHQLMVEQLDNE--TWD 142 (171)
T ss_dssp CSSSCCSCHHHHHHHHHHHHHHHHH------------HH---HTCH-HHHHHHHHHHHHHHHHHHHHHHHHHHTT--CHH
T ss_pred ccccccCCHHHHHHHHHHHHHHHHh------------hc---cCCH-HHHHHHHHHHHHHHHHHHHHHHHHHhhC--cHH
Confidence 11 2345665444333221211110 00 0111 1123344445555555555666666432 332
Q ss_pred c----CChHHHHHHHHHHHHHHhhccc
Q 025799 155 D----GRADEFVKWANAEARRLSGAAF 177 (248)
Q Consensus 155 ~----g~~~~f~~~~~~E~~~L~~~sf 177 (248)
. ...-.|..++..+++.+...-+
T Consensus 143 ~A~~~~~kl~y~~kl~~~i~~~~~~l~ 169 (171)
T 1fpo_A 143 AAADTCRKLRFLDKLRSSAEQLEEKLL 169 (171)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 1 1234688888888887765533
No 20
>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens}
Probab=99.77 E-value=1.9e-18 Score=148.98 Aligned_cols=86 Identities=24% Similarity=0.400 Sum_probs=68.7
Q ss_pred CCccccccCcCCC--CCHHHHHHHHHHHHHHhCCCCCCCChh-----HHHHHHHHHHHHHHcCCHhHHHHHhh--cCCCC
Q 025799 4 DTAYYDVLGVNVD--ASPAEIKKAYYLKARIVHPDKNPGDPK-----AAKNFQVLGEAYQVLSDPEKREAYDK--HGKEG 74 (248)
Q Consensus 4 ~~~yY~iLgV~~~--as~~eIkkaYrkla~k~HPDkn~~~~~-----a~~~f~~I~eAY~vLsdp~~R~~YD~--~G~~~ 74 (248)
..|||++|||+++ ++..+||++||++++++|||++++++. +.++|+.|++||+||+||.+|..||. +|.+.
T Consensus 42 ~~d~y~lLgv~~~~~a~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vLsdp~~R~~Yd~~l~G~~~ 121 (207)
T 3bvo_A 42 TRDYFSLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFFSQRSQTEKDFSEKHSTLVNDAYKTLLAPLSRGLYLLKLHGIEI 121 (207)
T ss_dssp TCCHHHHTTSCSCSCCCHHHHHHHHHHHHHHHCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHTTCCC
T ss_pred CCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHhcCCCc
Confidence 5799999999986 789999999999999999999986543 55789999999999999999999984 55433
Q ss_pred CCC-CCcchhhhhhhh
Q 025799 75 IPQ-DSMVDAAAVFGM 89 (248)
Q Consensus 75 ~~~-~~~~d~~~~f~~ 89 (248)
... ...+||..++.+
T Consensus 122 ~~e~~~~~d~~fLme~ 137 (207)
T 3bvo_A 122 PERTDYEMDRQFLIEI 137 (207)
T ss_dssp CSSCSSSSCHHHHHHH
T ss_pred ccccccCCCHHHHHHH
Confidence 222 344566644433
No 21
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}
Probab=99.77 E-value=3.6e-19 Score=146.57 Aligned_cols=70 Identities=24% Similarity=0.509 Sum_probs=63.8
Q ss_pred CCCccccccCcCCCCCHHHHHHHHHHHHHHhCCCCCCCCh------hHHHHHHHHHHHHHHcCCHhHHHHHhhcCC
Q 025799 3 KDTAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDP------KAAKNFQVLGEAYQVLSDPEKREAYDKHGK 72 (248)
Q Consensus 3 ~~~~yY~iLgV~~~as~~eIkkaYrkla~k~HPDkn~~~~------~a~~~f~~I~eAY~vLsdp~~R~~YD~~G~ 72 (248)
...|||+||||+++|+.++||+|||++++++|||++++.+ .+.+.|+.|++||+||+||.+|+.||..+.
T Consensus 8 ~~~~~y~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~a~~~f~~i~~Ay~~L~dp~~R~~Yd~~~~ 83 (155)
T 2l6l_A 8 PKKDWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKILGNEETKREYDLQRC 83 (155)
T ss_dssp CCSHHHHHHTCCTTCCHHHHHHHHHHHHHHHSCCCCCCCCTTHHHHHHHHHHHHHHHHHHHSSSHHHHCHHHHHHH
T ss_pred CCCChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHcc
Confidence 3569999999999999999999999999999999998653 267899999999999999999999998664
No 22
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=99.76 E-value=3.6e-20 Score=169.91 Aligned_cols=70 Identities=36% Similarity=0.552 Sum_probs=0.0
Q ss_pred CCCccccccCcCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHcCCHhHHHHHhhcCCC
Q 025799 3 KDTAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDKHGKE 73 (248)
Q Consensus 3 ~~~~yY~iLgV~~~as~~eIkkaYrkla~k~HPDkn~~~~~a~~~f~~I~eAY~vLsdp~~R~~YD~~G~~ 73 (248)
...|||++|||+++||.++||+|||++|++||||+|+ ++.+.++|++|++||++|+||.+|+.||+++..
T Consensus 26 ~~~d~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~-~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~ 95 (329)
T 3lz8_A 26 ELKDYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSK-ENDAEAKFKDLAEAWEVLKDEQRRAEYDQLWQH 95 (329)
T ss_dssp -----------------------------------------------------------------------
T ss_pred cccCHHHHcCcCCCCCHHHHHHHHHHHHHHHCCCCCC-ChHHHHHHHHHHHHHHHhhhhhhhcccchhhcc
Confidence 3479999999999999999999999999999999997 457889999999999999999999999999654
No 23
>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.75 E-value=3.5e-19 Score=134.34 Aligned_cols=62 Identities=32% Similarity=0.437 Sum_probs=57.8
Q ss_pred CCCccccccCcCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHcCCHhHHH
Q 025799 3 KDTAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKRE 65 (248)
Q Consensus 3 ~~~~yY~iLgV~~~as~~eIkkaYrkla~k~HPDkn~~~~~a~~~f~~I~eAY~vLsdp~~R~ 65 (248)
...|||+||||+++|+.++||+|||+++++||||+++ ++.+.+.|+.|++||++|+||.+|.
T Consensus 25 ~~~~~y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~-~~~~~~~f~~i~~Ay~~L~d~~~R~ 86 (90)
T 2ys8_A 25 NSKDSWDMLGVKPGASRDEVNKAYRKLAVLLHPDKCV-APGSEDAFKAVVNARTALLKNIKSG 86 (90)
T ss_dssp TCSSHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTTCC-CTTHHHHHHHHHHHHHHHHHHHCCS
T ss_pred cCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCC-CccHHHHHHHHHHHHHHHCCccccc
Confidence 4679999999999999999999999999999999997 4678899999999999999998875
No 24
>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1
Probab=99.74 E-value=6.6e-20 Score=144.39 Aligned_cols=85 Identities=21% Similarity=0.319 Sum_probs=70.1
Q ss_pred CccccccCcCCCCCH--HHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHcCCHhHHHHHhhcCCCCCCCCCcch
Q 025799 5 TAYYDVLGVNVDASP--AEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDKHGKEGIPQDSMVD 82 (248)
Q Consensus 5 ~~yY~iLgV~~~as~--~eIkkaYrkla~k~HPDkn~~~~~a~~~f~~I~eAY~vLsdp~~R~~YD~~G~~~~~~~~~~d 82 (248)
.+||+||||+++|+. .+||+|||++++++|||++++ .++|++|++||+||+||.+|+.||.+|.......
T Consensus 8 ~~~Y~iLgv~~~as~~~~eIk~aYr~la~~~HPDk~~~----~e~f~~I~~AYevL~d~~~R~~~~~~~~~w~~~~---- 79 (114)
T 1gh6_A 8 LQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD----EEKMKKMNTLYKKMEDGVKYAHQPDFGGFWDATE---- 79 (114)
T ss_dssp HHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCT----TTTTHHHHHHHHHHHHHHHSCCSSCCSCCCCCCC----
T ss_pred hhHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCCCCCcc----HHHHHHHHHHHHHHCCHHHHHHhhhccccccccc----
Confidence 589999999999999 999999999999999999974 3689999999999999999999999886432211
Q ss_pred hhhhhhhccccchHHHHhhH
Q 025799 83 AAAVFGMIFGSEYFEDYIGQ 102 (248)
Q Consensus 83 ~~~~f~~~fg~~~f~~~~g~ 102 (248)
...+|...|.+|...
T Consensus 80 -----~~~~g~p~w~~w~~~ 94 (114)
T 1gh6_A 80 -----IPTYGTDEWEQWWNA 94 (114)
T ss_dssp -----CCCCSSSCHHHHHHH
T ss_pred -----CCCCCCchHHHHHhc
Confidence 124566667777543
No 25
>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A
Probab=99.72 E-value=1e-17 Score=141.76 Aligned_cols=64 Identities=22% Similarity=0.469 Sum_probs=58.7
Q ss_pred CCcccccc------CcCC-CCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHcCCHhHHHHHhhc
Q 025799 4 DTAYYDVL------GVNV-DASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDKH 70 (248)
Q Consensus 4 ~~~yY~iL------gV~~-~as~~eIkkaYrkla~k~HPDkn~~~~~a~~~f~~I~eAY~vLsdp~~R~~YD~~ 70 (248)
..|||+|| |+++ ++|..+||+|||++++++|||++++ +.+.|+.|++||+||+||.+|..||..
T Consensus 10 ~~d~y~ll~~~~p~~~~~~~a~~~eIk~aYr~la~~~HPDk~~~---a~~~f~~i~~AY~vL~dp~~R~~Yd~~ 80 (181)
T 3uo3_A 10 TSTFYELFPKTFPKKLPIWTIDQSRLRKEYRQLQAQHHPDMAQQ---GSEQSSTLNQAYHTLKDPLRRSQYMLK 80 (181)
T ss_dssp SCCTGGGCTTTCTTCSCCSCCCHHHHHHHHHHHHHTCCTTSCCS---CSSGGGSHHHHHHHHHSHHHHHHHHHH
T ss_pred CCCHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHhCcCCCcc---HHHHHHHHHHHHHHHcChHHHHHHHHH
Confidence 46999999 4665 8999999999999999999999975 667899999999999999999999983
No 26
>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C
Probab=99.70 E-value=8.9e-19 Score=147.21 Aligned_cols=64 Identities=25% Similarity=0.379 Sum_probs=57.4
Q ss_pred CccccccCcCCCCC--HHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHcCCHhHHHHHhhcCC
Q 025799 5 TAYYDVLGVNVDAS--PAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDKHGK 72 (248)
Q Consensus 5 ~~yY~iLgV~~~as--~~eIkkaYrkla~k~HPDkn~~~~~a~~~f~~I~eAY~vLsdp~~R~~YD~~G~ 72 (248)
.+||+||||+++|+ .++||+|||++|+++|||++++ .++|++|++||++|+||.+|+.||++|.
T Consensus 11 ~d~Y~vLGl~~~as~~~~eIKkAYRkLa~~~HPDk~~~----~e~F~~I~~AYevLsdp~kR~~YD~~G~ 76 (174)
T 2pf4_E 11 LQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD----EEKMKKMNTLYKKMEDGVKYAHQPDFGG 76 (174)
T ss_dssp HHHHHTTTCCGGGTTCHHHHHHHHHHHGGGCSCC---C----CTTTTHHHHHHHHHHHHHHHHTSCGGGG
T ss_pred ccHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCcCCCCC----HHHHHHHHHHHHHhCCHHHHHHHhccCC
Confidence 58999999999999 6999999999999999999974 3689999999999999999999999996
No 27
>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1
Probab=99.70 E-value=4.8e-18 Score=125.30 Aligned_cols=65 Identities=17% Similarity=0.256 Sum_probs=58.1
Q ss_pred CccccccCcCCC--CCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHcCCHhHHHHHhhcCCCC
Q 025799 5 TAYYDVLGVNVD--ASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDKHGKEG 74 (248)
Q Consensus 5 ~~yY~iLgV~~~--as~~eIkkaYrkla~k~HPDkn~~~~~a~~~f~~I~eAY~vLsdp~~R~~YD~~G~~~ 74 (248)
.++|+||||+++ +|..+||+|||++++++|||+++ + .++|++|++||++|+||.+|.. +.||..+
T Consensus 11 ~~~y~iLgl~~~~~a~~~eIk~aYr~la~~~HPDk~~-~---~~~f~~i~~AYe~L~~~~~r~~-~~~g~~~ 77 (79)
T 1faf_A 11 ERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGG-S---HALMQELNSLWGTFKTEVYNLR-MNLGGTG 77 (79)
T ss_dssp HHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGSC-C---HHHHHHHHHHHHHHHHHHHHHT-TCCSSCC
T ss_pred HHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCC-C---HHHHHHHHHHHHHHhhHHHHHH-HhcCCcc
Confidence 469999999999 99999999999999999999985 2 4789999999999999999987 5577654
No 28
>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.68 E-value=8.1e-18 Score=126.68 Aligned_cols=60 Identities=23% Similarity=0.160 Sum_probs=55.7
Q ss_pred CccccccCcCCCCCHHHHHHHHHHHHHHhCCCCCCCCh-hHHHHHHHHHHHHHHcCCHhHH
Q 025799 5 TAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDP-KAAKNFQVLGEAYQVLSDPEKR 64 (248)
Q Consensus 5 ~~yY~iLgV~~~as~~eIkkaYrkla~k~HPDkn~~~~-~a~~~f~~I~eAY~vLsdp~~R 64 (248)
.++|+||||+++||.++||+|||+++++||||++++++ .+.++|+.|++||++|+|+..|
T Consensus 16 ~~~y~vLgv~~~as~~eIKkaYrkla~~~HPDk~~~~~~~a~~~F~~I~~AYevL~~~~~r 76 (88)
T 1iur_A 16 KEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLEKQAFL 76 (88)
T ss_dssp HHHHHHHHHTTSSCSHHHHHHHHHHHHHTCTTTSSSCHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHHHHhhccc
Confidence 57999999999999999999999999999999998764 4889999999999999998776
No 29
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.66 E-value=7.5e-18 Score=167.98 Aligned_cols=75 Identities=41% Similarity=0.740 Sum_probs=40.9
Q ss_pred CCCccccccCcCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHcCCHhHHHHHhhcCCCCCCC
Q 025799 3 KDTAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDKHGKEGIPQ 77 (248)
Q Consensus 3 ~~~~yY~iLgV~~~as~~eIkkaYrkla~k~HPDkn~~~~~a~~~f~~I~eAY~vLsdp~~R~~YD~~G~~~~~~ 77 (248)
.+.|||++|||+++||.++||+|||+++++||||++++++.+.++|+.|++||++|+||.+|+.||++|..+...
T Consensus 19 ~~~~~y~~lg~~~~a~~~~i~~ay~~l~~~~hpd~~~~~~~~~~~f~~i~~ay~~L~~~~~r~~yd~~~~~~~~~ 93 (780)
T 3apo_A 19 HDQNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLED 93 (780)
T ss_dssp ----CHHHHTCCTTCCHHHHHHHHCC-----------------------CTHHHHHHSHHHHHHHTTC-------
T ss_pred CCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHHcChHHHHHHHhhccccccc
Confidence 467999999999999999999999999999999999888889999999999999999999999999999877543
No 30
>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A
Probab=99.65 E-value=2.2e-17 Score=125.27 Aligned_cols=56 Identities=27% Similarity=0.459 Sum_probs=51.7
Q ss_pred CccccccCcCCCCCHHHHHHHHHHHHHHhCCCCCCCChh---HHHHHHHHHHHHHHcCC
Q 025799 5 TAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPK---AAKNFQVLGEAYQVLSD 60 (248)
Q Consensus 5 ~~yY~iLgV~~~as~~eIkkaYrkla~k~HPDkn~~~~~---a~~~f~~I~eAY~vLsd 60 (248)
.++|++|||+++||..+||+|||+++++||||+|++++. |.++|+.|++||+||.+
T Consensus 33 ~~~y~~Lgv~~~as~~eIKkAYRklal~~HPDK~~~~~~~~~A~~~F~~i~eAyevL~~ 91 (92)
T 2qwo_B 33 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPCKATGQPYEQYAKMIFMELNDAWSEFEN 91 (92)
T ss_dssp CCSCCCCCGGGSSSHHHHHHHHHHHHHHTCHHHHTTSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCeecCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHhHHHHHHHHHHHHHHHHHh
Confidence 489999999999999999999999999999999987653 78899999999999964
No 31
>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J
Probab=99.65 E-value=2e-17 Score=139.79 Aligned_cols=63 Identities=27% Similarity=0.499 Sum_probs=58.7
Q ss_pred CccccccCcCCCCCHHHHHHHHHHHHHHhCCCCCCCChh---HHHHHHHHHHHHHHcCCHhHHHHH
Q 025799 5 TAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPK---AAKNFQVLGEAYQVLSDPEKREAY 67 (248)
Q Consensus 5 ~~yY~iLgV~~~as~~eIkkaYrkla~k~HPDkn~~~~~---a~~~f~~I~eAY~vLsdp~~R~~Y 67 (248)
.+||++|||+++|+..+||+|||++++++|||++++.+. +.+.|+.|++||+||+||.+|..|
T Consensus 117 ~d~Y~vLgv~~~As~~eIKkAYRklal~~HPDK~~~~~~e~~A~~~F~~I~eAYevLsD~~kR~~Y 182 (182)
T 1n4c_A 117 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQKPLY 182 (182)
T ss_dssp CCCCCCCCGGGGSSHHHHHHHHHHHHHHTCGGGGSSCTTHHHHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred cchhhcCCCCCCCCHHHHHHHHHHHHHHHCcCcCCCcchHHHHHHHHHHHHHHHHHHCCHHhhhhC
Confidence 589999999999999999999999999999999986654 789999999999999999999766
No 32
>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana}
Probab=99.63 E-value=8.2e-17 Score=125.13 Aligned_cols=59 Identities=24% Similarity=0.349 Sum_probs=52.3
Q ss_pred CCCccccccCcCCCCCHHHHHHHHHHHHHHhCCCCCCC---Ch----hHHHHHHHHHHHHHHcCCHh
Q 025799 3 KDTAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPG---DP----KAAKNFQVLGEAYQVLSDPE 62 (248)
Q Consensus 3 ~~~~yY~iLgV~~~as~~eIkkaYrkla~k~HPDkn~~---~~----~a~~~f~~I~eAY~vLsdp~ 62 (248)
.+.+||+|||+++ ||..+||+|||++++++|||||++ ++ .|.++|+.|++||++|+||.
T Consensus 39 ~~~d~Y~vl~~~~-As~~eIKkAYRklal~~HPDK~~~~~~~~e~~~~A~~~F~~I~~AYevLsd~~ 104 (106)
T 3ag7_A 39 SGSGWKPVPLMDM-IEGNAVRKSYQRALLILHPDKLQQKGASANQKYMAEKVFELLQEAWDHFNTLG 104 (106)
T ss_dssp TTSCCCCCCGGGS-CSHHHHHHHHHHHHHHHCHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred ccCCHHHHcCCCC-CCHHHHHHHHHHHHHHHCcCcCCCcccchhhHHHHHHHHHHHHHHHHHHcCcc
Confidence 3579999999996 999999999999999999999873 12 36789999999999999985
No 33
>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=99.58 E-value=3.1e-16 Score=113.20 Aligned_cols=56 Identities=18% Similarity=0.164 Sum_probs=50.4
Q ss_pred CccccccCcCC-CCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHcCCHhHH
Q 025799 5 TAYYDVLGVNV-DASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKR 64 (248)
Q Consensus 5 ~~yY~iLgV~~-~as~~eIkkaYrkla~k~HPDkn~~~~~a~~~f~~I~eAY~vLsdp~~R 64 (248)
.++|+||||++ ++|.++||+|||++++++|||+++ ++ +.|++|++||++|+|+..|
T Consensus 14 ~~~y~iLgl~~~~a~~~eIk~ayr~l~~~~HPDk~g-~~---~~f~~i~~Aye~L~~~~~r 70 (71)
T 2guz_A 14 KEALQILNLTENTLTKKKLKEVHRKIMLANHPDKGG-SP---FLATKINEAKDFLEKRGIS 70 (71)
T ss_dssp HHHHHHTTCCTTTCCHHHHHHHHHHHHHHHCGGGTC-CH---HHHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHcCCCCCCCCHHHHHHHHHHHHHHHCCCCCC-CH---HHHHHHHHHHHHHhhhhhc
Confidence 47999999999 799999999999999999999974 33 5999999999999998654
No 34
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.08 E-value=5.4e-11 Score=107.21 Aligned_cols=66 Identities=42% Similarity=0.606 Sum_probs=56.0
Q ss_pred CCccccccCcCCCCCHHHHHHHHHHHHHHhCCCCCCCCh---hHHHHHHHHHHHHHHcCCHhHHHHHhh
Q 025799 4 DTAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDP---KAAKNFQVLGEAYQVLSDPEKREAYDK 69 (248)
Q Consensus 4 ~~~yY~iLgV~~~as~~eIkkaYrkla~k~HPDkn~~~~---~a~~~f~~I~eAY~vLsdp~~R~~YD~ 69 (248)
..++|.+||++++++..+|+++|+++++++|||+.+.++ .+.+.|+.|++||++|+||++|..||+
T Consensus 381 ~~~~y~~lg~~~~~~~~~~~~~y~~~~l~~~pd~~~~~~~~~~a~~~~~~i~~ay~~L~d~~~r~~yd~ 449 (450)
T 2y4t_A 381 KRDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDPEMRKKFDD 449 (450)
T ss_dssp SCCSGGGSCSSTTCCTTHHHHHHHHHHHHSCGGGCCSHHHHHHHHHHHHHHHHHHHHSSGGGGC-----
T ss_pred chhHHHHhCCCccCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHHHHhCCHHHHHhccC
Confidence 358999999999999999999999999999999997542 478899999999999999999999997
No 35
>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=98.74 E-value=7.6e-09 Score=73.31 Aligned_cols=51 Identities=10% Similarity=0.009 Sum_probs=44.2
Q ss_pred ccccccCcCCC---CCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHcCC
Q 025799 6 AYYDVLGVNVD---ASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSD 60 (248)
Q Consensus 6 ~yY~iLgV~~~---as~~eIkkaYrkla~k~HPDkn~~~~~a~~~f~~I~eAY~vLsd 60 (248)
+-|.||||+++ ++.++|+++||+|....|||+.. ++ .....|++|+++|..
T Consensus 5 EA~~ILgv~~~~~~a~~~~Ik~~yr~Lm~~nhPDkGG-S~---yl~~ki~~Ake~l~~ 58 (65)
T 2guz_B 5 ESCKILNIEESKGDLNMDKINNRFNYLFEVNDKEKGG-SF---YLQSKVYRAAERLKW 58 (65)
T ss_dssp HHHHHTTCCGGGTCCSHHHHHHHHHHHHHHTCGGGTC-CH---HHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCCCcCcCCHHHHHHHHHHHHHHhCCCCCC-CH---HHHHHHHHHHHHHHH
Confidence 44789999999 99999999999999999999974 33 567789999999864
No 36
>1ny9_A Transcriptional activator TIPA-S; all alpha, globin like; NMR {Streptomyces lividans} SCOP: a.181.1.1
Probab=40.42 E-value=51 Score=25.22 Aligned_cols=53 Identities=23% Similarity=0.184 Sum_probs=29.5
Q ss_pred CcCCCCCHH-HHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHcCCHhHHHHHhhcCC
Q 025799 12 GVNVDASPA-EIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDKHGK 72 (248)
Q Consensus 12 gV~~~as~~-eIkkaYrkla~k~HPDkn~~~~~a~~~f~~I~eAY~vLsdp~~R~~YD~~G~ 72 (248)
|++|+.... +|-+.++.......++..+ +.|..|.+-| +.||.-+..||++|.
T Consensus 71 g~~p~s~eaq~l~~~h~~~l~~~~~~~s~------e~~~~L~~mY--v~D~rF~~~~d~~~~ 124 (143)
T 1ny9_A 71 GEPADSEGAMDAAEDHRQGIARNHYDCGY------EMHTCLGEMY--VSDERFTRNIDAAKP 124 (143)
T ss_dssp TCCTTCHHHHHHHHHHHHHHHHHSSCCCH------HHHHHHHHHT--TSTHHHHHHHGGGST
T ss_pred CCCCCCHHHHHHHHHHHHHHHHhCCCCCH------HHHHHHHHHH--hcCHHHHHhHcccCh
Confidence 444444322 2444455543343444332 4566666666 478888888888753
No 37
>2cqn_A Formin-binding protein 3; FF domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.159.2.1
Probab=27.72 E-value=1.5e+02 Score=20.58 Aligned_cols=53 Identities=9% Similarity=0.142 Sum_probs=35.9
Q ss_pred CCHHHHHHHHHHHHHHhCCCCCCCCh--hHHHHHHHHHHHHHHcCCH-hHHHHHhhc
Q 025799 17 ASPAEIKKAYYLKARIVHPDKNPGDP--KAAKNFQVLGEAYQVLSDP-EKREAYDKH 70 (248)
Q Consensus 17 as~~eIkkaYrkla~k~HPDkn~~~~--~a~~~f~~I~eAY~vLsdp-~~R~~YD~~ 70 (248)
.-...++.+|+.+.+...|...+... .+...|... .+|..+.++ .++..|+.|
T Consensus 6 ~r~rrl~~~F~~mLk~~~p~I~~~s~We~vr~~~e~~-~~fkav~~E~eR~~lFeeY 61 (77)
T 2cqn_A 6 SGMKRKESAFKSMLKQAAPPIELDAVWEDIRERFVKE-PAFEDITLESERKRIFKDF 61 (77)
T ss_dssp CSHHHHHHHHHHHHHTCSSCCCTTCCHHHHHHHHTTS-HHHHTCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHccC-HHHHhcCCHHHHHHHHHHH
Confidence 34567899999997777687766442 345555554 489999775 566666665
No 38
>1ceu_A Protein (HIV-1 regulatory protein N-terminal domain VPR); helical domain, amphipaticity, viral protein; NMR {Synthetic} SCOP: j.11.1.1 PDB: 1fi0_A
Probab=27.19 E-value=78 Score=20.68 Aligned_cols=29 Identities=17% Similarity=0.233 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHHHHhhccchHHHHHHHHH
Q 025799 159 DEFVKWANAEARRLSGAAFGEAMLHTIGY 187 (248)
Q Consensus 159 ~~f~~~~~~E~~~L~~~sfg~~iL~~IG~ 187 (248)
+.|...+..|++.=+.--|...+||.+|.
T Consensus 16 ~eW~le~LeElk~EAvrHFpr~~L~~lgq 44 (51)
T 1ceu_A 16 NDWTLELLEELKNEAVRHFPRIWLHSLGQ 44 (51)
T ss_dssp SHHHHHHHHHHHHHTTTSCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 46888888888888888999999999984
Done!