Your job contains 1 sequence.
>025800
MDIEQGSHHHRRSVAGSEVSVCFSDAEDGGSCYSQFYSTTGGSYDEYSFACVSDDQEMSL
GGGDSRRVSSVSSSSSSDCSVEIESAVHEIEIKVHLATAAAAATTTTTNNNNRVEGERDC
RICRICHLCLESNSHESGVPIQLGCSCKDDLAAAHKQCAEAWFKIRGNKTCEICNSIARN
VAGATEIETAELSNEVNNANATSSISAAIGHGETRSIWHGHRFLNFLLACMVFAFVISWL
FHFNMPSS
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 025800
(248 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2166399 - symbol:AT5G05830 species:3702 "Arabi... 444 6.6e-42 1
TAIR|locus:2154523 - symbol:AT5G59000 "AT5G59000" species... 300 8.8e-34 3
TAIR|locus:2150084 - symbol:AT5G01070 species:3702 "Arabi... 365 1.5e-33 1
TAIR|locus:2065620 - symbol:AT2G37950 species:3702 "Arabi... 339 8.8e-31 1
TAIR|locus:2040949 - symbol:AT2G34200 species:3702 "Arabi... 183 3.0e-14 1
TAIR|locus:2175158 - symbol:AT5G60580 species:3702 "Arabi... 167 1.2e-11 1
TAIR|locus:2043664 - symbol:AT2G45530 species:3702 "Arabi... 149 5.5e-10 1
TAIR|locus:2081076 - symbol:AT3G06330 species:3702 "Arabi... 140 1.2e-07 1
TAIR|locus:2075064 - symbol:AT3G09760 species:3702 "Arabi... 137 4.1e-07 1
TAIR|locus:2144890 - symbol:AT5G18760 "AT5G18760" species... 132 1.4e-06 1
TAIR|locus:505006592 - symbol:AT5G08750 species:3702 "Ara... 122 1.1e-05 2
TAIR|locus:2160619 - symbol:SHA1 "shoot apical meristem a... 122 2.1e-05 1
TAIR|locus:2154109 - symbol:AT5G62460 species:3702 "Arabi... 109 0.00012 2
MGI|MGI:1925915 - symbol:March2 "membrane-associated ring... 111 0.00020 1
TAIR|locus:505006426 - symbol:PIT1 "pitchoun 1" species:3... 109 0.00025 1
UNIPROTKB|D6REN1 - symbol:MARCH1 "E3 ubiquitin-protein li... 98 0.00053 1
RGD|1306395 - symbol:March2 "membrane-associated ring fin... 107 0.00061 1
WB|WBGene00008433 - symbol:D2089.2 species:6239 "Caenorha... 89 0.00061 2
TAIR|locus:504956090 - symbol:AT2G01275 species:3702 "Ara... 107 0.00069 1
UNIPROTKB|B7Z739 - symbol:MARCH1 "E3 ubiquitin-protein li... 98 0.00073 1
TAIR|locus:2079112 - symbol:AT3G47550 species:3702 "Arabi... 105 0.00076 2
>TAIR|locus:2166399 [details] [associations]
symbol:AT5G05830 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR011016 Pfam:PF12906 PROSITE:PS51292
SMART:SM00744 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AB005237
HOGENOM:HOG000238468 UniGene:At.66662 EMBL:BT006377 EMBL:AK227517
IPI:IPI00516432 RefSeq:NP_196202.1 ProteinModelPortal:Q9FFJ5
SMR:Q9FFJ5 PRIDE:Q9FFJ5 EnsemblPlants:AT5G05830.1 GeneID:830468
KEGG:ath:AT5G05830 TAIR:At5g05830 eggNOG:NOG304565
InParanoid:Q9FFJ5 OMA:KGNKICE PhylomeDB:Q9FFJ5
ProtClustDB:CLSN2916385 Genevestigator:Q9FFJ5 Uniprot:Q9FFJ5
Length = 204
Score = 444 (161.4 bits), Expect = 6.6e-42, P = 6.6e-42
Identities = 83/134 (61%), Positives = 96/134 (71%)
Query: 115 EGERDCRICRICHLCLESNSHESGVPIQLGCSCKDDLAAAHKQCAEAWFKIRGNKTCEIC 174
+ ERDCRIC H+ L++ + ESGVPI+LGCSCK DLAAAHK CAE WFKI+GNK CE+C
Sbjct: 74 QSERDCRIC---HMSLDAANLESGVPIELGCSCKADLAAAHKHCAETWFKIKGNKICEVC 130
Query: 175 NSIARNVAGATEIETAELSNEVXXXXXXXXXXXXXGHGETRSIWHGHRFLNFLLACMVFA 234
SIA NV G+ E+E+ E NE E RS W GHRFLNFLLACMVFA
Sbjct: 131 GSIAGNVVGSVEVESEESRNEANGVENLTLRTSGPRLVEGRSFWQGHRFLNFLLACMVFA 190
Query: 235 FVISWLFHFNMPSS 248
FVISWLFHFN+PS+
Sbjct: 191 FVISWLFHFNVPST 204
>TAIR|locus:2154523 [details] [associations]
symbol:AT5G59000 "AT5G59000" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR011016 Pfam:PF12906 PROSITE:PS51292
SMART:SM00744 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:BT024612 IPI:IPI00541836
RefSeq:NP_200708.1 UniGene:At.29249 ProteinModelPortal:Q2HIG9
SMR:Q2HIG9 EnsemblPlants:AT5G59000.1 GeneID:836017
KEGG:ath:AT5G59000 TAIR:At5g59000 eggNOG:NOG236315
HOGENOM:HOG000238468 InParanoid:Q2HIG9 OMA:GRDCRIC PhylomeDB:Q2HIG9
ProtClustDB:CLSN2914849 Genevestigator:Q2HIG9 Uniprot:Q2HIG9
Length = 231
Score = 300 (110.7 bits), Expect = 8.8e-34, Sum P(3) = 8.8e-34
Identities = 58/115 (50%), Positives = 68/115 (59%)
Query: 131 ESNSHESGVPIQLGCSCKDDLAAAHKQCAEAWFKIRGNKTCEICNSIARNVAGATEIETA 190
E G+P+QLGCSCK DL AH +CAE WFKI+GN TCEIC ++A NVAG E
Sbjct: 120 EEEEEYYGLPLQLGCSCKGDLGVAHSKCAETWFKIKGNMTCEICGAMALNVAG--EQSNP 177
Query: 191 ELSNEVXXXXXXXXXXXXXGHGETRSIWHGHRFLNFLLACMVFAFVISWLFHFNM 245
E + E R IWHG +NFLLA MVFAFV+SWLFHF +
Sbjct: 178 ESTASTHSQAAAGQSLTQT---EPRGIWHGRPVMNFLLAAMVFAFVVSWLFHFKV 229
Score = 55 (24.4 bits), Expect = 8.8e-34, Sum P(3) = 8.8e-34
Identities = 12/19 (63%), Positives = 14/19 (73%)
Query: 115 EGERDCRICRICHLCLESN 133
+G RDCRIC HL LE+N
Sbjct: 76 KGGRDCRIC---HLPLETN 91
Score = 38 (18.4 bits), Expect = 8.8e-34, Sum P(3) = 8.8e-34
Identities = 15/42 (35%), Positives = 20/42 (47%)
Query: 6 GSHHHRRSVAGS-----EVSVCFSDAEDGGSCYSQFYSTTGG 42
GSHHH + S E+S+ D+ D S SQ +GG
Sbjct: 7 GSHHHLANPTDSPPYSVEISID-GDSSDWDSL-SQVDLESGG 46
>TAIR|locus:2150084 [details] [associations]
symbol:AT5G01070 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0008270 "zinc ion binding" evidence=IEA;ISS]
InterPro:IPR011016 Pfam:PF12906 PROSITE:PS51292 SMART:SM00744
EMBL:CP002688 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
IPI:IPI00938981 RefSeq:NP_001154689.1 UniGene:At.64221
ProteinModelPortal:F4K7X6 SMR:F4K7X6 EnsemblPlants:AT5G01070.2
GeneID:831898 KEGG:ath:AT5G01070 ArrayExpress:F4K7X6 Uniprot:F4K7X6
Length = 206
Score = 365 (133.5 bits), Expect = 1.5e-33, P = 1.5e-33
Identities = 71/127 (55%), Positives = 82/127 (64%)
Query: 123 CRICHLCLESNSHESGVPIQLGCSCKDDLAAAHKQCAEAWFKIRGNKTCEICNSIARNVA 182
CRICHL LES+ HE G P+ LGCSCKDDL HKQCA+ WFKI+GNKTCEIC SIA+N
Sbjct: 78 CRICHLGLESSRHECGDPMVLGCSCKDDLGYVHKQCADTWFKIKGNKTCEICRSIAQNFF 137
Query: 183 GA-TEI-ETAELSNEVXXXXXXXXXXXXXGHGETRSIWHGHRFLNFLLACMVFAFVISWL 240
EI +T +N + R + G+RFLNFLL CMV AFVISW
Sbjct: 138 KVDNEIGQTTVETNVDDVEAGNTPTMVATSDSDDRRLCRGNRFLNFLLTCMVCAFVISWF 197
Query: 241 FHFNMPS 247
FHFN+PS
Sbjct: 198 FHFNLPS 204
>TAIR|locus:2065620 [details] [associations]
symbol:AT2G37950 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0009555 "pollen development" evidence=IMP]
[GO:0009741 "response to brassinosteroid stimulus" evidence=RCA]
InterPro:IPR011016 Pfam:PF12906 PROSITE:PS51292 SMART:SM00744
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009555 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 HOGENOM:HOG000238468
EMBL:BT015932 EMBL:BT020500 IPI:IPI00547071 PIR:B84799
RefSeq:NP_181331.1 UniGene:At.43950 ProteinModelPortal:Q5XEN4
SMR:Q5XEN4 EnsemblPlants:AT2G37950.1 GeneID:818372
KEGG:ath:AT2G37950 TAIR:At2g37950 eggNOG:NOG248960 OMA:FISWIFH
PhylomeDB:Q5XEN4 ProtClustDB:CLSN2912914 Genevestigator:Q5XEN4
Uniprot:Q5XEN4
Length = 207
Score = 339 (124.4 bits), Expect = 8.8e-31, P = 8.8e-31
Identities = 63/126 (50%), Positives = 80/126 (63%)
Query: 123 CRICHLCLESNSHESGVPIQLGCSCKDDLAAAHKQCAEAWFKIRGNKTCEICNSIARNVA 182
CRICHL +E++ G I+LGCSCKDDLA AH+QCAE WFKI+G+KTCEIC S+ARNV
Sbjct: 84 CRICHLGVETSG---GGAIELGCSCKDDLAVAHRQCAETWFKIKGDKTCEICQSVARNVG 140
Query: 183 GATEIETAELSNEVXXXXXXXXXXXXXGHGETRSIWHGHRFLNFLLACMVFAFVISWLFH 242
GA E+ + + G + W R +N +LACMVF F ISW+FH
Sbjct: 141 GANEMVGSTMEERELRNGEETAAGEGGGATVVENRWQPQRVVNLVLACMVFGFFISWIFH 200
Query: 243 FNMPSS 248
F++ SS
Sbjct: 201 FHVSSS 206
Score = 155 (59.6 bits), Expect = 2.8e-11, P = 2.8e-11
Identities = 45/130 (34%), Positives = 60/130 (46%)
Query: 1 MDIEQGSH--HHRRSVAGSEVSVCFSDAEDGGSCYSQFYSTTGGSYDEYS---FACVSDD 55
+D+EQG +HRRS+ GS+VSV +SD ED SCYS FYSTTGGSY EY VS
Sbjct: 5 IDLEQGGAFGYHRRSLDGSDVSVYYSDGEDVMSCYSYFYSTTGGSY-EYEGDQSRKVSSV 63
Query: 56 QEMSLGGGDXXXXXXXXXXXXXDCSVEIE-SAVHEIEIKVHLXXXXXXXXXXXXXXXXRV 114
S D C + +E S IE+ ++
Sbjct: 64 MSPSSSEIDDDDATAPPEKDCRICHLGVETSGGGAIELGCSCKDDLAVAHRQCAETWFKI 123
Query: 115 EGERDCRICR 124
+G++ C IC+
Sbjct: 124 KGDKTCEICQ 133
>TAIR|locus:2040949 [details] [associations]
symbol:AT2G34200 species:3702 "Arabidopsis thaliana"
[GO:0005794 "Golgi apparatus" evidence=ISM] [GO:0008270 "zinc ion
binding" evidence=IEA;ISS] [GO:0016020 "membrane" evidence=IDA]
InterPro:IPR011016 Pfam:PF12906 PROSITE:PS51292 SMART:SM00744
EMBL:CP002685 GO:GO:0016020 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 EMBL:AY247802 IPI:IPI00516519 RefSeq:NP_180967.2
UniGene:At.47757 ProteinModelPortal:Q84RF4 SMR:Q84RF4
EnsemblPlants:AT2G34200.1 GeneID:817981 KEGG:ath:AT2G34200
TAIR:At2g34200 InParanoid:Q84RF4 OMA:RICRICH PhylomeDB:Q84RF4
ProtClustDB:CLSN2915127 Genevestigator:Q84RF4 Uniprot:Q84RF4
Length = 222
Score = 183 (69.5 bits), Expect = 3.0e-14, P = 3.0e-14
Identities = 35/68 (51%), Positives = 43/68 (63%)
Query: 121 RICRICHLCLESNSHESG-----VP--IQLGCSCKDDLAAAHKQCAEAWFKIRGNKTCEI 173
RICRICH + + SG P I++GC CK++L AH CAEAWFK+RGN CEI
Sbjct: 100 RICRICHFGSDQSPEASGDDKSVSPELIEIGCKCKNELGLAHFHCAEAWFKLRGNSVCEI 159
Query: 174 CNSIARNV 181
C A+NV
Sbjct: 160 CGCTAKNV 167
>TAIR|locus:2175158 [details] [associations]
symbol:AT5G60580 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR011016 Pfam:PF12906 PROSITE:PS51292
SMART:SM00744 EMBL:CP002688 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 IPI:IPI00541814 RefSeq:NP_001032112.1
RefSeq:NP_851232.1 UniGene:At.24411 ProteinModelPortal:F4K0E2
SMR:F4K0E2 EnsemblPlants:AT5G60580.2 EnsemblPlants:AT5G60580.4
GeneID:836179 KEGG:ath:AT5G60580 OMA:SMTASTM PhylomeDB:F4K0E2
Uniprot:F4K0E2
Length = 494
Score = 167 (63.8 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 35/80 (43%), Positives = 45/80 (56%)
Query: 115 EGERDCRICRICHLCLESNSHESGVPIQLGCSCKDDLAAAHKQCAEAWFKIRGNKTCEIC 174
E E CRIC + LC E G +++ CSCK +LA AHK CA WF I+GNKTCE+C
Sbjct: 252 EDEAVCRICLV-ELC------EGGETLKMECSCKGELALAHKDCALKWFTIKGNKTCEVC 304
Query: 175 NSIARNVAGATEIETAELSN 194
+N+ T + L N
Sbjct: 305 KQEVKNLP-VTLLRIQSLRN 323
>TAIR|locus:2043664 [details] [associations]
symbol:AT2G45530 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008270 "zinc ion
binding" evidence=IEA;ISS] InterPro:IPR011016 Pfam:PF12906
PROSITE:PS51292 SMART:SM00744 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 EMBL:AC003680 EMBL:BT002381 EMBL:BT006278
IPI:IPI00518588 PIR:T00866 RefSeq:NP_566045.1 UniGene:At.48594
UniGene:At.70362 UniGene:At.75370 ProteinModelPortal:O64633
SMR:O64633 EnsemblPlants:AT2G45530.1 GeneID:819161
KEGG:ath:AT2G45530 TAIR:At2g45530 eggNOG:NOG244699
HOGENOM:HOG000029131 InParanoid:O64633 OMA:SSHEQCR PhylomeDB:O64633
ProtClustDB:CLSN2688943 ArrayExpress:O64633 Genevestigator:O64633
Uniprot:O64633
Length = 240
Score = 149 (57.5 bits), Expect = 5.5e-10, P = 5.5e-10
Identities = 29/69 (42%), Positives = 40/69 (57%)
Query: 126 CHLCLESNSHESGVPIQLGCSCKDDLAAAHKQCAEAWFKIRGNKTCEICNSIARNVAGAT 185
C +CL+ V I+LGC C+ LA AH+ C +AWF+ +G+ CEIC +A NV T
Sbjct: 74 CRVCLQDKEE---VLIELGCQCRGGLAKAHRSCIDAWFRTKGSNQCEICQVVAVNV---T 127
Query: 186 EIETAELSN 194
ET +N
Sbjct: 128 PPETQPTTN 136
>TAIR|locus:2081076 [details] [associations]
symbol:AT3G06330 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005794 "Golgi apparatus"
evidence=ISM] [GO:0008270 "zinc ion binding" evidence=IEA;ISS]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IDA]
InterPro:IPR011016 Pfam:PF12906 PROSITE:PS51292 SMART:SM00744
EMBL:CP002686 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AC011623 GO:GO:0004842 HOGENOM:HOG000240594 EMBL:AF428443
EMBL:AY133573 EMBL:DQ086840 IPI:IPI00545142 RefSeq:NP_566281.1
UniGene:At.20572 UniGene:At.74200 ProteinModelPortal:Q9SQT6
SMR:Q9SQT6 IntAct:Q9SQT6 PRIDE:Q9SQT6 EnsemblPlants:AT3G06330.1
GeneID:819807 KEGG:ath:AT3G06330 TAIR:At3g06330 InParanoid:Q9SQT6
OMA:HEACAMK PhylomeDB:Q9SQT6 ProtClustDB:CLSN2688112
Genevestigator:Q9SQT6 Uniprot:Q9SQT6
Length = 426
Score = 140 (54.3 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 21/57 (36%), Positives = 35/57 (61%)
Query: 125 ICHLCLESNSHESGVPIQLGCSCKDDLAAAHKQCAEAWFKIRGNKTCEICNSIARNV 181
+C +CL+ E G +++ CSCK DL H+ CA WF +G +TC++C + +N+
Sbjct: 217 VCRICLDVC--EEGNTLKMECSCKGDLRLVHEACAMKWFSTKGTRTCDVCRQVVQNL 271
>TAIR|locus:2075064 [details] [associations]
symbol:AT3G09760 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0006635 "fatty acid beta-oxidation"
evidence=RCA] [GO:0016558 "protein import into peroxisome matrix"
evidence=RCA] InterPro:IPR011016 Pfam:PF12906 PROSITE:PS51292
SMART:SM00744 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 UniGene:At.66500
HOGENOM:HOG000240594 eggNOG:KOG1609 EMBL:AY054231 EMBL:AY113176
EMBL:DQ059112 IPI:IPI00520510 RefSeq:NP_566355.1 UniGene:At.26390
ProteinModelPortal:Q940P1 SMR:Q940P1 PaxDb:Q940P1 PRIDE:Q940P1
EnsemblPlants:AT3G09760.1 GeneID:820134 KEGG:ath:AT3G09760
TAIR:At3g09760 InParanoid:Q940P1 OMA:AHSNPES PhylomeDB:Q940P1
ProtClustDB:CLSN2688220 Genevestigator:Q940P1 Uniprot:Q940P1
Length = 491
Score = 137 (53.3 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 21/57 (36%), Positives = 35/57 (61%)
Query: 125 ICHLCLESNSHESGVPIQLGCSCKDDLAAAHKQCAEAWFKIRGNKTCEICNSIARNV 181
+C +CL +S ++ C C+ +LA AHK+C WF I+GN+TC++C +N+
Sbjct: 265 VCRICLVELGEDSEA-FKMECLCRGELALAHKECTIKWFTIKGNRTCDVCKQEVQNL 320
>TAIR|locus:2144890 [details] [associations]
symbol:AT5G18760 "AT5G18760" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0008270
"zinc ion binding" evidence=IEA;ISS] [GO:0009507 "chloroplast"
evidence=ISM] InterPro:IPR011016 Pfam:PF12906 PROSITE:PS51292
SMART:SM00744 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:BT025559 IPI:IPI00518282
RefSeq:NP_197377.2 UniGene:At.31385 ProteinModelPortal:Q1H5A5
SMR:Q1H5A5 PRIDE:Q1H5A5 EnsemblPlants:AT5G18760.1 GeneID:831994
KEGG:ath:AT5G18760 TAIR:At5g18760 eggNOG:NOG269391
HOGENOM:HOG000240594 InParanoid:Q1H5A5 OMA:NEANGDQ PhylomeDB:Q1H5A5
ProtClustDB:CLSN2918192 Genevestigator:Q1H5A5 Uniprot:Q1H5A5
Length = 411
Score = 132 (51.5 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 21/57 (36%), Positives = 33/57 (57%)
Query: 125 ICHLCLESNSHESGVPIQLGCSCKDDLAAAHKQCAEAWFKIRGNKTCEICNSIARNV 181
+C +CL+ E G +++ CSCK DL H+ CA WF +G + C++C RN+
Sbjct: 202 VCRICLDVC--EEGNTLKMECSCKGDLRLVHEHCAIKWFSTKGTRICDVCRQEVRNL 256
>TAIR|locus:505006592 [details] [associations]
symbol:AT5G08750 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR011016 Pfam:PF12906 PROSITE:PS51292
SMART:SM00744 EMBL:CP002688 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 IPI:IPI00846907 RefSeq:NP_001078548.1
UniGene:At.26266 ProteinModelPortal:F4KCH0 SMR:F4KCH0
EnsemblPlants:AT5G08750.3 GeneID:830776 KEGG:ath:AT5G08750
OMA:AILFVFW Uniprot:F4KCH0
Length = 370
Score = 122 (48.0 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 20/41 (48%), Positives = 25/41 (60%)
Query: 141 IQLGCSCKDDLAAAHKQCAEAWFKIRGNKTCEICNSIARNV 181
++LGCSCK+DLA H CA WF G+ CEIC N+
Sbjct: 130 LELGCSCKNDLALVHYACALKWFVNHGSTVCEICGKTTENI 170
Score = 36 (17.7 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 8/16 (50%), Positives = 9/16 (56%)
Query: 43 SYDEYSFACVSDDQEM 58
S D F C +DD EM
Sbjct: 105 SPDGEVFVCANDDIEM 120
>TAIR|locus:2160619 [details] [associations]
symbol:SHA1 "shoot apical meristem arrest 1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] [GO:0010492
"maintenance of shoot apical meristem identity" evidence=IMP]
[GO:0048507 "meristem development" evidence=IMP] [GO:0000023
"maltose metabolic process" evidence=RCA] [GO:0000165 "MAPK
cascade" evidence=RCA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0006612 "protein targeting to
membrane" evidence=RCA] [GO:0009617 "response to bacterium"
evidence=RCA] [GO:0009862 "systemic acquired resistance, salicylic
acid mediated signaling pathway" evidence=RCA] [GO:0009867
"jasmonic acid mediated signaling pathway" evidence=RCA]
[GO:0010310 "regulation of hydrogen peroxide metabolic process"
evidence=RCA] [GO:0010363 "regulation of plant-type hypersensitive
response" evidence=RCA] [GO:0019252 "starch biosynthetic process"
evidence=RCA] [GO:0031348 "negative regulation of defense response"
evidence=RCA] [GO:0035304 "regulation of protein dephosphorylation"
evidence=RCA] [GO:0043085 "positive regulation of catalytic
activity" evidence=RCA] InterPro:IPR011016 Pfam:PF12906
PROSITE:PS51292 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0010492
UniGene:At.49213 UniGene:At.8706 EMBL:BT002521 EMBL:BT008456
IPI:IPI00529986 RefSeq:NP_201183.2 ProteinModelPortal:Q8GUG6
SMR:Q8GUG6 IntAct:Q8GUG6 EnsemblPlants:AT5G63780.1 GeneID:836498
KEGG:ath:AT5G63780 TAIR:At5g63780 eggNOG:NOG331235
HOGENOM:HOG000083721 InParanoid:Q8GUG6 OMA:FICTNDI PhylomeDB:Q8GUG6
ProtClustDB:CLSN2689553 ArrayExpress:Q8GUG6 Genevestigator:Q8GUG6
Uniprot:Q8GUG6
Length = 367
Score = 122 (48.0 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 22/50 (44%), Positives = 30/50 (60%)
Query: 135 HESGVPIQLGCSCKDDLAAAHKQCAEAWFKIRGNKTCEICNSIARNVAGA 184
H+ + ++LGCSCK++LA H CA WF G+ CEIC A N+ A
Sbjct: 130 HQDAL-LELGCSCKNELALVHYACALKWFLNHGSTVCEICGHPAENIKTA 178
>TAIR|locus:2154109 [details] [associations]
symbol:AT5G62460 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008270 "zinc ion
binding" evidence=IEA;ISS] InterPro:IPR011016 Pfam:PF12906
PROSITE:PS51292 SMART:SM00744 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 EMBL:AB015469 InterPro:IPR022143 Pfam:PF12428
HOGENOM:HOG000238177 EMBL:AY060581 EMBL:AY142052 IPI:IPI00544629
RefSeq:NP_568953.1 UniGene:At.21229 ProteinModelPortal:Q9FJJ6
SMR:Q9FJJ6 PRIDE:Q9FJJ6 EnsemblPlants:AT5G62460.1 GeneID:836366
KEGG:ath:AT5G62460 TAIR:At5g62460 eggNOG:NOG296097
InParanoid:Q9FJJ6 OMA:CNEKGDV PhylomeDB:Q9FJJ6
ProtClustDB:CLSN2917786 Genevestigator:Q9FJJ6 Uniprot:Q9FJJ6
Length = 307
Score = 109 (43.4 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 21/63 (33%), Positives = 36/63 (57%)
Query: 114 VEGERDCRICRI-CHLCLESNSHESGVPIQLGCSCKDDLAAAHKQCAEAWFKIRGNKTCE 172
V+ E + I + C +C E +S ++ ++ CSC L AH++C + W +G+ TCE
Sbjct: 65 VDDEEEPLIQSVECRICQEEDSVKN---LESPCSCSGSLKYAHRKCVQRWCNEKGDTTCE 121
Query: 173 ICN 175
IC+
Sbjct: 122 ICH 124
Score = 40 (19.1 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 222 RFLNFLLACMVFAFVISWL 240
R FLL C + A+ IS L
Sbjct: 233 RAAGFLLPCYIMAWAISIL 251
>MGI|MGI:1925915 [details] [associations]
symbol:March2 "membrane-associated ring finger (C3HC4) 2"
species:10090 "Mus musculus" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISO] [GO:0005764 "lysosome" evidence=IEA]
[GO:0005768 "endosome" evidence=IEA] [GO:0005783 "endoplasmic
reticulum" evidence=ISO] [GO:0006897 "endocytosis" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0016874
"ligase activity" evidence=IEA] [GO:0031410 "cytoplasmic vesicle"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR011016 Pfam:PF12906 PROSITE:PS51292 SMART:SM00744
UniPathway:UPA00143 MGI:MGI:1925915 GO:GO:0005783 GO:GO:0016021
GO:GO:0005765 GO:GO:0005789 GO:GO:0046872 GO:GO:0008270
GO:GO:0031410 GO:GO:0006897 GO:GO:0010008 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 eggNOG:COG5183
GeneTree:ENSGT00570000078779 CTD:51257 HOVERGEN:HBG052411 KO:K10657
OrthoDB:EOG4NKBWB EMBL:AK079234 EMBL:AK081495 EMBL:BC002144
IPI:IPI01026892 RefSeq:NP_001239409.1 UniGene:Mm.374865
ProteinModelPortal:Q99M02 SMR:Q99M02 PRIDE:Q99M02
Ensembl:ENSMUST00000172767 GeneID:224703 KEGG:mmu:224703
UCSC:uc008bzk.1 InParanoid:Q99M02 ChiTaRS:MARCH2 NextBio:377316
Bgee:Q99M02 CleanEx:MM_MARCH2 Genevestigator:Q99M02
GermOnline:ENSMUSG00000059208 Uniprot:Q99M02
Length = 246
Score = 111 (44.1 bits), Expect = 0.00020, P = 0.00020
Identities = 21/63 (33%), Positives = 30/63 (47%)
Query: 114 VEGERDCRICRICHLCLESNSHESGVPIQLGCSCKDDLAAAHKQCAEAWFKIRGNKTCEI 173
++ + DC CRICH E + E+ + C C L A HK C E W CE+
Sbjct: 55 LDSQSDCPFCRICH---EGANGEN---LLSPCGCTGTLGAVHKSCLEKWLSSSNTSYCEL 108
Query: 174 CNS 176
C++
Sbjct: 109 CHT 111
>TAIR|locus:505006426 [details] [associations]
symbol:PIT1 "pitchoun 1" species:3702 "Arabidopsis
thaliana" [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008270 "zinc
ion binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=IDA] InterPro:IPR011016 Pfam:PF12906 PROSITE:PS51292
SMART:SM00744 GO:GO:0005886 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:NOG310544
InterPro:IPR022143 Pfam:PF12428 HOGENOM:HOG000238177 EMBL:AF130849
EMBL:DQ086841 IPI:IPI00517111 RefSeq:NP_567222.1 UniGene:At.11152
ProteinModelPortal:Q9XF50 SMR:Q9XF50 STRING:Q9XF50
EnsemblPlants:AT4G02075.1 GeneID:828146 KEGG:ath:AT4G02075
TAIR:At4g02075 InParanoid:Q9XF50 OMA:FIIIRTI PhylomeDB:Q9XF50
ProtClustDB:CLSN2689282 ArrayExpress:Q9XF50 Genevestigator:Q9XF50
Uniprot:Q9XF50
Length = 218
Score = 109 (43.4 bits), Expect = 0.00025, P = 0.00025
Identities = 25/74 (33%), Positives = 37/74 (50%)
Query: 123 CRICHLCLESNSHESGVPIQLGCSCKDDLAAAHKQCAEAWFKIRGNKTCEICNSIARNVA 182
CRICH E + E VP C+C + AH+ C + W +GN TCEIC + ++
Sbjct: 20 CRICHEEEEESFFE--VP----CACSGTVKFAHRNCIQRWCNEKGNTTCEICLQVYKDGY 73
Query: 183 GATEIETAELSNEV 196
A ++ + EV
Sbjct: 74 TAVLKQSKLIEQEV 87
>UNIPROTKB|D6REN1 [details] [associations]
symbol:MARCH1 "E3 ubiquitin-protein ligase MARCH1"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0002495 "antigen processing and presentation of
peptide antigen via MHC class II" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005765
"lysosomal membrane" evidence=IEA] [GO:0005789 "endoplasmic
reticulum membrane" evidence=IEA] [GO:0006955 "immune response"
evidence=IEA] [GO:0031901 "early endosome membrane" evidence=IEA]
[GO:0031902 "late endosome membrane" evidence=IEA] [GO:0032588
"trans-Golgi network membrane" evidence=IEA] InterPro:IPR011016
Pfam:PF12906 PROSITE:PS51292 SMART:SM00744 GO:GO:0031901
GO:GO:0006955 GO:GO:0031902 GO:GO:0005765 GO:GO:0032588
GO:GO:0005789 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000209 HGNC:HGNC:26077 GO:GO:0002495
HOGENOM:HOG000293394 EMBL:AC079232 EMBL:AC079240 EMBL:AC092631
EMBL:AC093788 EMBL:AC098867 EMBL:AC105250 EMBL:AC108154
EMBL:AC112247 IPI:IPI00965098 ProteinModelPortal:D6REN1 SMR:D6REN1
Ensembl:ENST00000507270 ArrayExpress:D6REN1 Bgee:D6REN1
Uniprot:D6REN1
Length = 141
Score = 98 (39.6 bits), Expect = 0.00053, P = 0.00053
Identities = 20/53 (37%), Positives = 24/53 (45%)
Query: 122 ICRICHLCLESNSHESGVPIQLGCSCKDDLAAAHKQCAEAWFKIRGNKTCEIC 174
ICRICH C ES P+ C C L H+ C W K + CE+C
Sbjct: 79 ICRICH-C--EGDEES--PLITPCRCTGTLRFVHQSCLHQWIKSSDTRCCELC 126
>RGD|1306395 [details] [associations]
symbol:March2 "membrane-associated ring finger (C3HC4) 2, E3
ubiquitin protein ligase" species:10116 "Rattus norvegicus"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISO;ISS]
[GO:0005765 "lysosomal membrane" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=ISO;ISS] [GO:0005789 "endoplasmic
reticulum membrane" evidence=IEA] [GO:0006897 "endocytosis"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0010008 "endosome membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=ISO;ISS] [GO:0031410 "cytoplasmic vesicle"
evidence=ISO;ISS] InterPro:IPR011016 Pfam:PF12906 PROSITE:PS51292
SMART:SM00744 UniPathway:UPA00143 RGD:1306395 GO:GO:0005783
GO:GO:0016021 GO:GO:0005765 GO:GO:0005789 GO:GO:0046872
GO:GO:0008270 GO:GO:0031410 GO:GO:0006897 GO:GO:0010008
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 eggNOG:COG5183
GeneTree:ENSGT00570000078779 CTD:51257 HOGENOM:HOG000293394
HOVERGEN:HBG052411 KO:K10657 OMA:ICHEGAG OrthoDB:EOG4NKBWB
EMBL:AB048838 EMBL:BC088286 IPI:IPI00194311 RefSeq:NP_001029280.1
UniGene:Rn.145219 HSSP:P90495 ProteinModelPortal:Q5I0I2
STRING:Q5I0I2 Ensembl:ENSRNOT00000010399 GeneID:362849
KEGG:rno:362849 UCSC:RGD:1306395 InParanoid:Q5I0I2 NextBio:681518
ArrayExpress:Q5I0I2 Genevestigator:Q5I0I2 Uniprot:Q5I0I2
Length = 246
Score = 107 (42.7 bits), Expect = 0.00061, P = 0.00061
Identities = 21/58 (36%), Positives = 27/58 (46%)
Query: 119 DCRICRICHLCLESNSHESGVPIQLGCSCKDDLAAAHKQCAEAWFKIRGNKTCEICNS 176
DC CRICH E + E+ + C C L A HK C E W CE+C++
Sbjct: 60 DCPFCRICH---EGANGEN---LLSPCGCTGTLGAVHKSCLEKWLSSSNTSYCELCHT 111
>WB|WBGene00008433 [details] [associations]
symbol:D2089.2 species:6239 "Caenorhabditis elegans"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0040017 "positive regulation
of locomotion" evidence=IMP] [GO:0019915 "lipid storage"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0016246
"RNA interference" evidence=IMP] [GO:0006898 "receptor-mediated
endocytosis" evidence=IMP] InterPro:IPR011016 Pfam:PF12906
PROSITE:PS51292 SMART:SM00744 GO:GO:0009792 GO:GO:0006898
GO:GO:0040010 GO:GO:0002119 GO:GO:0016246 GO:GO:0008270
GO:GO:0040011 GO:GO:0040017 GO:GO:0019915 Gene3D:3.30.40.10
InterPro:IPR013083 EMBL:Z36948 GeneTree:ENSGT00390000009948
RefSeq:NP_496302.2 ProteinModelPortal:Q18997 SMR:Q18997
EnsemblMetazoa:D2089.2 GeneID:183961 KEGG:cel:CELE_D2089.2
UCSC:D2089.2 CTD:183961 WormBase:D2089.2 eggNOG:NOG308829
InParanoid:Q18997 OMA:VRTTSNI NextBio:923004 Uniprot:Q18997
Length = 206
Score = 89 (36.4 bits), Expect = 0.00061, Sum P(2) = 0.00061
Identities = 16/53 (30%), Positives = 26/53 (49%)
Query: 125 ICHLCLESNSHESGVPIQLGCSCKDDLAAAHKQCAEAWFKIRGNKTCEICNSI 177
IC +C ++++ + I+ CSC +A H C E W + N C IC +
Sbjct: 24 ICRICFDNDTSSDSL-IK-PCSCSGTVAYVHNGCLEQWVRTTSNIQCTICQDM 74
Score = 51 (23.0 bits), Expect = 0.00061, Sum P(2) = 0.00061
Identities = 13/32 (40%), Positives = 14/32 (43%)
Query: 210 GHGETRSIWHGHRFLNFLL-ACMVFAFVISWL 240
G G RS W + NFL M F F WL
Sbjct: 138 GTGMMRSFWWMTFWFNFLYYGAMCFVFFEKWL 169
>TAIR|locus:504956090 [details] [associations]
symbol:AT2G01275 species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] InterPro:IPR011016
Pfam:PF12906 PROSITE:PS51292 SMART:SM00744 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 eggNOG:COG5183 UniGene:At.20100
InterPro:IPR022143 Pfam:PF12428 EMBL:BT012639 IPI:IPI00540748
RefSeq:NP_001030936.1 RefSeq:NP_671763.1 UniGene:At.71272
ProteinModelPortal:Q6NKQ5 SMR:Q6NKQ5 EnsemblPlants:AT2G01275.1
EnsemblPlants:AT2G01275.2 GeneID:814655 KEGG:ath:AT2G01275
TAIR:At2g01275 HOGENOM:HOG000238177 InParanoid:Q6NKQ5 OMA:ECRICHD
PhylomeDB:Q6NKQ5 ProtClustDB:CLSN2690102 Genevestigator:Q6NKQ5
Uniprot:Q6NKQ5
Length = 259
Score = 107 (42.7 bits), Expect = 0.00069, P = 0.00069
Identities = 22/61 (36%), Positives = 33/61 (54%)
Query: 116 GERDCRICRICH-LCLESNSHESGVPIQLGCSCKDDLAAAHKQCAEAWFKIRGNKTCEIC 174
G+ CRICH L+SN ++ CSC + AH++C + W +G+ TCEIC
Sbjct: 52 GDLSMAECRICHDEDLDSN-------METPCSCSGSVKYAHRRCVQRWCNEKGDTTCEIC 104
Query: 175 N 175
+
Sbjct: 105 H 105
>UNIPROTKB|B7Z739 [details] [associations]
symbol:MARCH1 "E3 ubiquitin-protein ligase MARCH1"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR011016 Pfam:PF12906 PROSITE:PS51292
SMART:SM00744 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
UniGene:Hs.592804 UniGene:Hs.608487 HGNC:HGNC:26077 EMBL:AC079232
EMBL:AC079240 EMBL:AC092631 EMBL:AC093788 EMBL:AC098867
EMBL:AC105250 EMBL:AC108154 EMBL:AC112247 EMBL:AK301408
IPI:IPI00922039 SMR:B7Z739 STRING:B7Z739 Ensembl:ENST00000510786
HOGENOM:HOG000082420 Uniprot:B7Z739
Length = 144
Score = 98 (39.6 bits), Expect = 0.00073, P = 0.00073
Identities = 20/53 (37%), Positives = 24/53 (45%)
Query: 122 ICRICHLCLESNSHESGVPIQLGCSCKDDLAAAHKQCAEAWFKIRGNKTCEIC 174
ICRICH C ES P+ C C L H+ C W K + CE+C
Sbjct: 62 ICRICH-C--EGDEES--PLITPCRCTGTLRFVHQSCLHQWIKSSDTRCCELC 109
>TAIR|locus:2079112 [details] [associations]
symbol:AT3G47550 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0008270 "zinc ion
binding" evidence=IEA;ISS] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0006623 "protein targeting to vacuole" evidence=RCA]
[GO:0016192 "vesicle-mediated transport" evidence=RCA]
InterPro:IPR011016 Pfam:PF12906 PROSITE:PS51292 SMART:SM00744
GO:GO:0005634 GO:GO:0005737 EMBL:CP002686 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AL132955 eggNOG:COG5183
InterPro:IPR022143 Pfam:PF12428 UniGene:At.48746 UniGene:At.71217
HOGENOM:HOG000238177 EMBL:AK226509 IPI:IPI00543433 PIR:T45715
RefSeq:NP_190339.1 RefSeq:NP_974396.1 ProteinModelPortal:Q9SN83
SMR:Q9SN83 STRING:Q9SN83 EnsemblPlants:AT3G47550.3
EnsemblPlants:AT3G47550.6 GeneID:823909 KEGG:ath:AT3G47550
TAIR:At3g47550 InParanoid:Q9SN83 OMA:LIGMVEC PhylomeDB:Q9SN83
ProtClustDB:CLSN2685177 Genevestigator:Q9SN83 Uniprot:Q9SN83
Length = 288
Score = 105 (42.0 bits), Expect = 0.00076, Sum P(2) = 0.00076
Identities = 17/50 (34%), Positives = 30/50 (60%)
Query: 126 CHLCLESNSHESGVPIQLGCSCKDDLAAAHKQCAEAWFKIRGNKTCEICN 175
C +C E +S ++ ++ C+C L AH++C + W +G+ TCEIC+
Sbjct: 69 CRICQEEDSTKN---LEAPCACNGSLKYAHRKCVQRWCNEKGDITCEICH 115
Score = 36 (17.7 bits), Expect = 0.00076, Sum P(2) = 0.00076
Identities = 8/19 (42%), Positives = 10/19 (52%)
Query: 222 RFLNFLLACMVFAFVISWL 240
R FLL C + A+ I L
Sbjct: 222 RAAGFLLPCYIMAWAIGIL 240
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.134 0.429 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 248 206 0.00097 111 3 11 22 0.46 32
31 0.47 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 21
No. of states in DFA: 610 (65 KB)
Total size of DFA: 204 KB (2113 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 16.09u 0.09s 16.18t Elapsed: 00:00:01
Total cpu time: 16.09u 0.09s 16.18t Elapsed: 00:00:01
Start: Sat May 11 03:12:20 2013 End: Sat May 11 03:12:21 2013