Your job contains 1 sequence.
>025802
MAHLAARRTVASIITRTLTSPRSRLAIPILNKQQPQIGPDPICNPARFKTSGSSYSPLND
PSPNWSNRPPKETIMLDGCDYQHWLIVMEFPNPSELSEEEMINAYVKTLAAVVGSEEEAK
KKIYSVCTTTYTGFGALIDEELSYKVKGQPGVLWVLPDSYIDVPNKDYGGDLFVDGKVIH
RPQYRFTERQQRPRTRRRETTQADRRRLWAQNQSAPSQQPTSMSNQNPAQAGGTNFSINQ
GQNNQKSA
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 025802
(248 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2083348 - symbol:MORF3 "multiple organellar RN... 652 6.0e-64 1
TAIR|locus:2086310 - symbol:RIP1 "RNA-editing factor inte... 449 6.7e-45 2
TAIR|locus:2051003 - symbol:DAL1 "differentiation and gre... 406 7.0e-38 1
TAIR|locus:2206639 - symbol:AT1G32580 "AT1G32580" species... 405 8.9e-38 1
TAIR|locus:2063389 - symbol:MORF6 "multiple organellar RN... 402 1.9e-37 1
TAIR|locus:2200131 - symbol:MORF9 "multiple organellar RN... 394 1.3e-36 1
UNIPROTKB|Q2R8U1 - symbol:Os11g0216400 "Os11g0216400 prot... 335 2.3e-30 1
TAIR|locus:2119782 - symbol:MORF1 "multiple organellar RN... 302 6.8e-30 2
TAIR|locus:2156344 - symbol:MORF4 "AT5G44780" species:370... 268 1.9e-25 2
TAIR|locus:2030200 - symbol:AT1G72530 "AT1G72530" species... 279 2.0e-24 1
TAIR|locus:2009625 - symbol:AT1G53260 species:3702 "Arabi... 197 2.7e-18 2
TAIR|locus:2088756 - symbol:AT3G20930 species:3702 "Arabi... 151 7.5e-09 1
>TAIR|locus:2083348 [details] [associations]
symbol:MORF3 "multiple organellar RNA editing factor 3"
species:3702 "Arabidopsis thaliana" [GO:0009507 "chloroplast"
evidence=ISM] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0050897
"cobalt ion binding" evidence=IDA] [GO:1900864 "mitochondrial RNA
modification" evidence=IMP] GO:GO:0005739 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0050897 EMBL:AC023912
HOGENOM:HOG000272676 GO:GO:1900864 UniGene:At.18838
UniGene:At.74889 IPI:IPI00530723 RefSeq:NP_187335.1 STRING:Q9M7Y5
PRIDE:Q9M7Y5 EnsemblPlants:AT3G06790.1 GeneID:819864
KEGG:ath:AT3G06790 TAIR:At3g06790 InParanoid:Q9M7Y5
ProtClustDB:CLSN2684671 Genevestigator:Q9M7Y5 Uniprot:Q9M7Y5
Length = 244
Score = 652 (234.6 bits), Expect = 6.0e-64, P = 6.0e-64
Identities = 131/199 (65%), Positives = 157/199 (78%)
Query: 1 MAHLAARRTVASIITRTLTS--------P----RSRLAIPILNK---QQPQIGPDPICNP 45
MA ++ RRT+++++ +TL+S P RSR A+P++ K + +GP I
Sbjct: 1 MALISTRRTLSTLLNKTLSSSTSYSSSFPTLSSRSRFAMPLIEKVSSSRTSLGPCYIST- 59
Query: 46 ARFKTSGSSYSPLNDPSPNWSNRPPKETIMLDGCDYQHWLIVMEFPNPSELSEEEMINAY 105
R KTSGS YSPLNDPSPNWSNRPPKETI+LDGCDY+HWLIVMEF +P +EEEMIN+Y
Sbjct: 60 -RPKTSGSGYSPLNDPSPNWSNRPPKETILLDGCDYEHWLIVMEFTDPKP-TEEEMINSY 117
Query: 106 VKTLAAVVGSEEEAKKKIYSVCTTTYTGFGALIDEELSYKVKGQPGVLWVLPDSYIDVPN 165
VKTL +V+G +EEAKKKIYSVCT+TYTGFGALI EELS KVK PGVLWVLPDSY+DVPN
Sbjct: 118 VKTLTSVLGWQEEAKKKIYSVCTSTYTGFGALISEELSCKVKALPGVLWVLPDSYLDVPN 177
Query: 166 KDYGGDLFVDGKVIHRPQY 184
KDYGGDL+V+GKVI RPQY
Sbjct: 178 KDYGGDLYVEGKVIPRPQY 196
>TAIR|locus:2086310 [details] [associations]
symbol:RIP1 "RNA-editing factor interacting protein 1"
species:3702 "Arabidopsis thaliana" [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0050897 "cobalt ion
binding" evidence=IDA] [GO:0009451 "RNA modification" evidence=IMP]
[GO:0016554 "cytidine to uridine editing" evidence=IMP] [GO:0080156
"mitochondrial mRNA modification" evidence=IMP] GO:GO:0005739
GO:GO:0009507 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0016554
GO:GO:0050897 EMBL:AP000370 GO:GO:0080156 EMBL:AF428427
IPI:IPI00532410 RefSeq:NP_566496.1 UniGene:At.24349
UniGene:At.67750 IntAct:Q9LKA5 STRING:Q9LKA5 PaxDb:Q9LKA5
PRIDE:Q9LKA5 EnsemblPlants:AT3G15000.1 GeneID:820729
KEGG:ath:AT3G15000 GeneFarm:775 TAIR:At3g15000 eggNOG:NOG243672
HOGENOM:HOG000243016 InParanoid:Q9LKA5 OMA:GAPPQNN PhylomeDB:Q9LKA5
ProtClustDB:CLSN2915005 Genevestigator:Q9LKA5 GermOnline:AT3G15000
Uniprot:Q9LKA5
Length = 395
Score = 449 (163.1 bits), Expect = 6.7e-45, Sum P(2) = 6.7e-45
Identities = 82/136 (60%), Positives = 108/136 (79%)
Query: 50 TSGSSYSPLNDPSPNWSNRPPKETIMLDGCDYQHWLIVMEFPNPSELSEEEMINAYVKTL 109
T +S S LNDP+PNWSNRPPKETI+LDGCD++HWL+V+E P E + +E+I++Y+KTL
Sbjct: 67 TQATS-SSLNDPNPNWSNRPPKETILLDGCDFEHWLVVVE-PPQGEPTRDEIIDSYIKTL 124
Query: 110 AAVVGSEEEAKKKIYSVCTTTYTGFGALIDEELSYKVKGQPGVLWVLPDSYIDVPNKDYG 169
A +VGSE+EA+ KIYSV T Y FGAL+ E+LS+K+K V WVLPDSY+DV NKDYG
Sbjct: 125 AQIVGSEDEARMKIYSVSTRCYYAFGALVSEDLSHKLKELSNVRWVLPDSYLDVRNKDYG 184
Query: 170 GDLFVDGKVI-HRPQY 184
G+ F+DGK + + P+Y
Sbjct: 185 GEPFIDGKAVPYDPKY 200
Score = 40 (19.1 bits), Expect = 6.7e-45, Sum P(2) = 6.7e-45
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 211 QNQSAPSQQPTSMSNQNPAQAGGTN 235
Q Q + QQP +N P + G N
Sbjct: 367 QQQGSGMQQPQYQNNYPPNRDGSGN 391
>TAIR|locus:2051003 [details] [associations]
symbol:DAL1 "differentiation and greening-like 1"
species:3702 "Arabidopsis thaliana" [GO:0003674
"molecular_function" evidence=ND] [GO:0002103 "endonucleolytic
cleavage of tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA,
4.5S-rRNA, 5S-rRNA)" evidence=IMP] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0009657 "plastid organization" evidence=IMP]
[GO:0000478 "endonucleolytic cleavage involved in rRNA processing"
evidence=RCA] [GO:0006364 "rRNA processing" evidence=RCA]
[GO:0006399 "tRNA metabolic process" evidence=RCA] [GO:0009658
"chloroplast organization" evidence=RCA] [GO:0009902 "chloroplast
relocation" evidence=RCA] [GO:0009965 "leaf morphogenesis"
evidence=RCA] [GO:0010027 "thylakoid membrane organization"
evidence=RCA] [GO:0010207 "photosystem II assembly" evidence=RCA]
[GO:0030154 "cell differentiation" evidence=RCA] [GO:0034660 "ncRNA
metabolic process" evidence=RCA] [GO:0035304 "regulation of protein
dephosphorylation" evidence=RCA] [GO:0042793 "transcription from
plastid promoter" evidence=RCA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=RCA] GO:GO:0009507
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009657 EMBL:AC002332
EMBL:AF446351 EMBL:AY097425 EMBL:AK228465 IPI:IPI00521047
PIR:D84745 PIR:T52623 RefSeq:NP_180901.1 UniGene:At.111
IntAct:O22793 STRING:O22793 PaxDb:O22793 PRIDE:O22793
EnsemblPlants:AT2G33430.1 GeneID:817907 KEGG:ath:AT2G33430
TAIR:At2g33430 eggNOG:NOG268944 HOGENOM:HOG000272676
InParanoid:O22793 OMA:YSRRREN PhylomeDB:O22793
ProtClustDB:CLSN2682809 ArrayExpress:O22793 Genevestigator:O22793
GO:GO:0002103 Uniprot:O22793
Length = 219
Score = 406 (148.0 bits), Expect = 7.0e-38, P = 7.0e-38
Identities = 78/132 (59%), Positives = 101/132 (76%)
Query: 51 SGSSYSPLNDPSPNWSNRPPKETIML-DGCDYQHWLIVMEFPNPSELSEEEMINAYVKTL 109
SGS+YSPLN S N+S+RPP E L GCDY+HWLIVM+ P ++++MI+ Y++TL
Sbjct: 54 SGSTYSPLNSGS-NFSDRPPTEMAPLFPGCDYEHWLIVMDKPGGEGATKQQMIDCYIQTL 112
Query: 110 AAVVGSEEEAKKKIYSVCTTTYTGFGALIDEELSYKVKGQPGVLWVLPDSYIDVPNKDYG 169
A VVGSEEEAKK+IY+V Y GFG IDEE S K++G PGVL+VLPDSY+D NKDYG
Sbjct: 113 AKVVGSEEEAKKRIYNVSCERYLGFGCEIDEETSTKLEGLPGVLFVLPDSYVDPENKDYG 172
Query: 170 GDLFVDGKVIHR 181
+LFV+G+++ R
Sbjct: 173 AELFVNGEIVQR 184
>TAIR|locus:2206639 [details] [associations]
symbol:AT1G32580 "AT1G32580" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0009507 "chloroplast"
evidence=ISM] [GO:0005739 "mitochondrion" evidence=IDA]
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005739 EMBL:AC055769
HOGENOM:HOG000272676 ProtClustDB:CLSN2682809 EMBL:AY063995
EMBL:AY096695 IPI:IPI00520554 PIR:D86451 RefSeq:NP_174536.1
UniGene:At.27111 IntAct:Q9C7Y2 STRING:Q9C7Y2 PaxDb:Q9C7Y2
PRIDE:Q9C7Y2 EnsemblPlants:AT1G32580.1 GeneID:840152
KEGG:ath:AT1G32580 TAIR:At1g32580 eggNOG:NOG251524 OMA:GENATKQ
PhylomeDB:Q9C7Y2 ArrayExpress:Q9C7Y2 Genevestigator:Q9C7Y2
Uniprot:Q9C7Y2
Length = 229
Score = 405 (147.6 bits), Expect = 8.9e-38, P = 8.9e-38
Identities = 90/195 (46%), Positives = 123/195 (63%)
Query: 1 MAHLAARRTVASIITRTLTSPRSRLAIP--ILNKQQPQIGPDP---ICNPARFKT----- 50
MA AR T + I R +++ + P IL+++ + I + RF T
Sbjct: 1 MAKTLARSTASRITKRLISTSGATTPSPSYILSRRSTPVFSHAVGFISSLNRFTTIRTRM 60
Query: 51 --SGSSYSPLNDPSPNWSNRPPKETIML-DGCDYQHWLIVMEFPNPSELSEEEMINAYVK 107
SG SYSPL S N+S+R P E L GCDY+HWLIVM+ P ++++MI+ YV+
Sbjct: 61 DRSGGSYSPLKSGS-NFSDRAPTEMAPLFPGCDYEHWLIVMDKPGGENATKQQMIDCYVQ 119
Query: 108 TLAAVVGSEEEAKKKIYSVCTTTYTGFGALIDEELSYKVKGQPGVLWVLPDSYIDVPNKD 167
TLA ++GSEEEAKKKIY+V Y GFG IDEE S K++G PGVL++LPDSY+D NKD
Sbjct: 120 TLAKIIGSEEEAKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFILPDSYVDQENKD 179
Query: 168 YGGDLFVDGKVIHRP 182
YG +LFV+G+++ RP
Sbjct: 180 YGAELFVNGEIVQRP 194
>TAIR|locus:2063389 [details] [associations]
symbol:MORF6 "multiple organellar RNA editing factor 6"
species:3702 "Arabidopsis thaliana" [GO:0009507 "chloroplast"
evidence=ISM] [GO:0005739 "mitochondrion" evidence=IDA]
GO:GO:0005739 EMBL:CP002685 GenomeReviews:CT485783_GR EMBL:AC004667
HOGENOM:HOG000272676 ProtClustDB:CLSN2682809 EMBL:AY072439
EMBL:BT003414 IPI:IPI00523082 PIR:B84766 RefSeq:NP_181067.1
UniGene:At.37691 IntAct:O82169 PaxDb:O82169 PRIDE:O82169
EnsemblPlants:AT2G35240.1 GeneID:818091 KEGG:ath:AT2G35240
TAIR:At2g35240 eggNOG:NOG317940 OMA:SPTIFHA PhylomeDB:O82169
ArrayExpress:O82169 Genevestigator:O82169 Uniprot:O82169
Length = 232
Score = 402 (146.6 bits), Expect = 1.9e-37, P = 1.9e-37
Identities = 80/137 (58%), Positives = 99/137 (72%)
Query: 47 RFKTSGSSYSPLNDPSPNWSNRPPKETIML-DGCDYQHWLIVMEFPNPSELSEEEMINAY 105
R SG SYSPL S N+S+RPP E L GCDY+HWLIVME P +++MI+ Y
Sbjct: 62 RMDRSGGSYSPLKSGS-NFSDRPPTEMAPLFPGCDYEHWLIVMEKPGGENAQKQQMIDCY 120
Query: 106 VKTLAAVVGSEEEAKKKIYSVCTTTYTGFGALIDEELSYKVKGQPGVLWVLPDSYIDVPN 165
V+TLA +VGSEEEA+KKIY+V Y GFG IDEE S K++G PGVL+VLPDSY+D
Sbjct: 121 VQTLAKIVGSEEEARKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFVLPDSYVDPEF 180
Query: 166 KDYGGDLFVDGKVIHRP 182
KDYG +LFV+G+V+ RP
Sbjct: 181 KDYGAELFVNGEVVPRP 197
>TAIR|locus:2200131 [details] [associations]
symbol:MORF9 "multiple organellar RNA editing factor 9"
species:3702 "Arabidopsis thaliana" [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0009941 "chloroplast envelope" evidence=IDA]
[GO:0009570 "chloroplast stroma" evidence=IDA] [GO:1900865
"chloroplast RNA modification" evidence=IMP] [GO:0006364 "rRNA
processing" evidence=RCA] [GO:0006399 "tRNA metabolic process"
evidence=RCA] [GO:0009073 "aromatic amino acid family biosynthetic
process" evidence=RCA] [GO:0009658 "chloroplast organization"
evidence=RCA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=RCA] [GO:0010027 "thylakoid membrane
organization" evidence=RCA] [GO:0016226 "iron-sulfur cluster
assembly" evidence=RCA] [GO:0045036 "protein targeting to
chloroplast" evidence=RCA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=RCA] EMBL:CP002684
GO:GO:0009570 GO:GO:0009941 EMBL:AC011661 GO:GO:1900865
EMBL:BT005071 EMBL:AK117508 IPI:IPI00532519 RefSeq:NP_172610.1
UniGene:At.42133 IntAct:Q9LPZ1 STRING:Q9LPZ1 PRIDE:Q9LPZ1
ProMEX:Q9LPZ1 EnsemblPlants:AT1G11430.1 GeneID:837685
KEGG:ath:AT1G11430 TAIR:At1g11430 InParanoid:Q9LPZ1 OMA:NEQRETI
PhylomeDB:Q9LPZ1 ProtClustDB:CLSN2681966 ArrayExpress:Q9LPZ1
Genevestigator:Q9LPZ1 Uniprot:Q9LPZ1
Length = 232
Score = 394 (143.8 bits), Expect = 1.3e-36, P = 1.3e-36
Identities = 76/122 (62%), Positives = 90/122 (73%)
Query: 59 NDPSPNWSN-RPPKETIMLDGCDYQHWLIVMEFPNPSELSEEEMINAYVKTLAAVVGSEE 117
+D S SN +ETIML GCDY HWLIVMEFP S ++MI+ Y+ TLA V+GS E
Sbjct: 64 SDYSSKRSNSNEQRETIMLPGCDYNHWLIVMEFPKDPAPSRDQMIDTYLNTLATVLGSME 123
Query: 118 EAKKKIYSVCTTTYTGFGALIDEELSYKVKGQPGVLWVLPDSYIDVPNKDYGGDLFVDGK 177
EAKK +Y+ TTTYTGF IDEE S K KG PGVLWVLPDSYIDV NKDYGGD +++G+
Sbjct: 124 EAKKNMYAFSTTTYTGFQCTIDEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYINGE 183
Query: 178 VI 179
+I
Sbjct: 184 II 185
>UNIPROTKB|Q2R8U1 [details] [associations]
symbol:Os11g0216400 "Os11g0216400 protein" species:39947
"Oryza sativa Japonica Group" [GO:0004252 "serine-type
endopeptidase activity" evidence=ISS] EMBL:DP000010 EMBL:AP008217
GO:GO:0004252 eggNOG:NOG12793 EMBL:CM000148 RefSeq:NP_001067510.1
UniGene:Os.39944 STRING:Q2R8U1 EnsemblPlants:LOC_Os11g11020.1
GeneID:4350082 KEGG:osa:4350082 OMA:LITMEFP ProtClustDB:CLSN2698490
Uniprot:Q2R8U1
Length = 374
Score = 335 (123.0 bits), Expect = 2.3e-30, P = 2.3e-30
Identities = 79/186 (42%), Positives = 109/186 (58%)
Query: 4 LAARRTVASIITRTLTSPRSRLAIPILNKQQPQIGPDPICNP----ARFKTSGSSYSPLN 59
LAA T AS R S SR A P+ P P + P A F++S ++ +
Sbjct: 11 LAAASTSASPFLRPAASA-SRSA-PLAAAPLPP--PHQVSRPWLPAAGFRSSAAASAAAR 66
Query: 60 DPSPNWSNRPPK---ETIMLDGCDYQHWLIVMEFPNPSELSEEEMINAYVKTLAAVVGSE 116
+ K + I+ +GCDY HWLI MEFP+P + EEMI Y++TLA VVGS
Sbjct: 67 GDDYGRRDVDEKISPDEILFEGCDYNHWLITMEFPDPKP-TREEMIETYLQTLAKVVGSY 125
Query: 117 EEAKKKIYSVCTTTYTGFGALIDEELSYKVKGQPGVLWVLPDSYIDVPNKDYGGDLFVDG 176
EEAKK++Y+ TTTY GF A++ EE+S K +G PGV+++LPDSY+ K+YGGD + +G
Sbjct: 126 EEAKKRMYAFSTTTYVGFQAVMTEEMSEKFRGLPGVVFILPDSYLYPETKEYGGDKYENG 185
Query: 177 KVIHRP 182
+ RP
Sbjct: 186 VITPRP 191
>TAIR|locus:2119782 [details] [associations]
symbol:MORF1 "multiple organellar RNA editing factor 1"
species:3702 "Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:1900864 "mitochondrial RNA modification"
evidence=IMP] [GO:1900865 "chloroplast RNA modification"
evidence=IMP] GO:GO:0005739 GO:GO:0009507 EMBL:CP002687
EMBL:AL021637 EMBL:AL161552 HOGENOM:HOG000243016 EMBL:BT002761
IPI:IPI00534157 PIR:T04886 RefSeq:NP_193735.1 UniGene:At.32756
STRING:O49429 PaxDb:O49429 PRIDE:O49429 EnsemblPlants:AT4G20020.1
GeneID:827747 KEGG:ath:AT4G20020 TAIR:At4g20020 eggNOG:NOG285776
InParanoid:O49429 OMA:HWLITMD PhylomeDB:O49429
ProtClustDB:CLSN2685724 Genevestigator:O49429 GO:GO:1900865
GO:GO:1900864 Uniprot:O49429
Length = 419
Score = 302 (111.4 bits), Expect = 6.8e-30, Sum P(2) = 6.8e-30
Identities = 57/114 (50%), Positives = 81/114 (71%)
Query: 71 KETIMLDGCDYQHWLIVMEFPNP-SELSEEEMINAYVKTLAAVVG-SEEEAKKKIYSVCT 128
++T++ +GCDY HWLI M+F + S EEM+ AY +T A +G S EEAK+++Y+ T
Sbjct: 77 EDTVLFEGCDYNHWLITMDFSKEETPKSPEEMVAAYEETCAQGLGISVEEAKQRMYACST 136
Query: 129 TTYTGFGALIDEELSYKVKGQPGVLWVLPDSYIDVPNKDYGGDLFVDGKVIHRP 182
TTY GF A++ E+ S K K PGV+++LPDSYID NK+YGGD + +G + HRP
Sbjct: 137 TTYQGFQAIMTEQESEKFKDLPGVVFILPDSYIDPQNKEYGGDKYENGVITHRP 190
Score = 44 (20.5 bits), Expect = 6.8e-30, Sum P(2) = 6.8e-30
Identities = 9/24 (37%), Positives = 12/24 (50%)
Query: 218 QQPTSMSNQNPAQAGGTNFSINQG 241
Q+ T Q P Q GG ++ QG
Sbjct: 218 QRNTQYGQQPPMQGGGGSYGPQQG 241
>TAIR|locus:2156344 [details] [associations]
symbol:MORF4 "AT5G44780" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0048481 "ovule development" evidence=RCA]
EMBL:CP002688 GenomeReviews:BA000015_GR eggNOG:NOG12793
EMBL:AB016874 EMBL:AC002342 HOGENOM:HOG000243016 EMBL:BT012578
EMBL:AK221549 IPI:IPI00548630 RefSeq:NP_199291.1 UniGene:At.30053
PaxDb:O48582 PRIDE:O48582 EnsemblPlants:AT5G44780.1 GeneID:834507
KEGG:ath:AT5G44780 TAIR:At5g44780 InParanoid:O48582 OMA:RMSIPGQ
PhylomeDB:O48582 ProtClustDB:CLSN2916734 Genevestigator:O48582
Uniprot:O48582
Length = 723
Score = 268 (99.4 bits), Expect = 1.9e-25, Sum P(2) = 1.9e-25
Identities = 62/141 (43%), Positives = 81/141 (57%)
Query: 44 NPAR-FKTSGSSYSPLNDPSPNWSNRPPKETIMLDGCDYQHWLIVMEFPNPSELSEEEMI 102
+PAR F T+ Y P S P E GCD+ HWLI M FP + S EEMI
Sbjct: 52 SPARLFSTTQYQYDPYTGED---SFMPDNE-----GCDFNHWLITMNFPKDNLPSREEMI 103
Query: 103 NAYVKTLAAVVG-SEEEAKKKIYSVCTTTYTGFGALIDEELSYKVKGQPGVLWVLPDSYI 161
+ + +T A + S EEAKKKIY++CTT+Y GF A + K + PGV +++PDSYI
Sbjct: 104 SIFEQTCAKGLAISLEEAKKKIYAICTTSYQGFQATMTIGEVEKFRDLPGVQYIIPDSYI 163
Query: 162 DVPNKDYGGDLFVDGKVIHRP 182
DV NK YGGD + +G + P
Sbjct: 164 DVENKVYGGDKYENGVITPGP 184
Score = 55 (24.4 bits), Expect = 1.9e-25, Sum P(2) = 1.9e-25
Identities = 13/27 (48%), Positives = 14/27 (51%)
Query: 220 PTSMSNQNPAQ-AGGTNFSINQGQNNQ 245
P S N +PAQ AG F QGQ Q
Sbjct: 422 PQSGGNYSPAQGAGSPRFGYGQGQGGQ 448
Score = 50 (22.7 bits), Expect = 6.3e-25, Sum P(2) = 6.3e-25
Identities = 14/39 (35%), Positives = 18/39 (46%)
Query: 211 QNQSAPSQQPTSMSNQNPAQAGGTNFSINQ-GQNNQKSA 248
Q Q+ SQ P+S QA G+ NQ G N + A
Sbjct: 326 QGQAQRSQMPSSQGTLRQGQAQGSQRPSNQVGYNQGQGA 364
Score = 44 (20.5 bits), Expect = 2.7e-24, Sum P(2) = 2.7e-24
Identities = 12/35 (34%), Positives = 17/35 (48%)
Query: 211 QNQSAPSQQPTSMSNQNPAQAGGTNFSINQGQNNQ 245
Q Q+ SQ+P++ N Q T +QGQ Q
Sbjct: 343 QGQAQGSQRPSNQVGYNQGQGAQTP-PYHQGQGAQ 376
Score = 40 (19.1 bits), Expect = 7.0e-24, Sum P(2) = 7.0e-24
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 212 NQSAPSQQPTSMSNQNPAQAGG----TNFSINQ 240
NQ+ +Q P N N A GG T+ + NQ
Sbjct: 619 NQAHGAQAPPYHGNYNQATPGGYGQGTSANFNQ 651
Score = 37 (18.1 bits), Expect = 1.4e-23, Sum P(2) = 1.4e-23
Identities = 12/36 (33%), Positives = 13/36 (36%)
Query: 209 WA---QNQSAPSQQPTSMSNQNPAQAGGTNFSINQG 241
WA NQ P QN Q G N+S G
Sbjct: 501 WAFVNYNQGPPQGNFLQGPQQNHNQGGQWNYSPQNG 536
>TAIR|locus:2030200 [details] [associations]
symbol:AT1G72530 "AT1G72530" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002684 IPI:IPI00938919 RefSeq:NP_001154468.1
UniGene:At.50962 EnsemblPlants:AT1G72530.2 GeneID:843585
KEGG:ath:AT1G72530 OMA:YDEKYHA ArrayExpress:F4IDD2 Uniprot:F4IDD2
Length = 192
Score = 279 (103.3 bits), Expect = 2.0e-24, P = 2.0e-24
Identities = 62/136 (45%), Positives = 89/136 (65%)
Query: 51 SGSSYSPLNDPSPNWSN--RPPKETIMLDGCDYQHWLIVMEFPNPSELSEEEMINAYVKT 108
SG+S S +N + +WS R P +++GCDY+HWL++M+ PN + ++ ++V+T
Sbjct: 26 SGNSGS-INSETTSWSELIRVPS---LVEGCDYKHWLVLMKPPNGYP-TRNHIVQSFVET 80
Query: 109 LAAVVGSEEEAKKKIYSVCTTTYTGFGALIDEELSYKVKGQPGVLWVLPDSYI-DVPNKD 167
LA +GSEEEAK+ IYSV T Y FG I E L+YK++ P V WVLPDS+I D N+
Sbjct: 81 LAMALGSEEEAKRSIYSVSTKYYYAFGCRIHEPLTYKIRSLPDVKWVLPDSFIVDGDNR- 139
Query: 168 YG----GDLFVDGKVI 179
YG G+ FVDG+V+
Sbjct: 140 YGVFFAGEPFVDGEVV 155
>TAIR|locus:2009625 [details] [associations]
symbol:AT1G53260 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] EMBL:CP002684 UniGene:At.50949
EMBL:AY954765 IPI:IPI00546248 RefSeq:NP_175733.2 PRIDE:Q58G44
EnsemblPlants:AT1G53260.1 GeneID:841759 KEGG:ath:AT1G53260
OMA:PPPNMNQ Genevestigator:Q58G44 Uniprot:Q58G44
Length = 271
Score = 197 (74.4 bits), Expect = 2.7e-18, Sum P(2) = 2.7e-18
Identities = 37/64 (57%), Positives = 47/64 (73%)
Query: 122 KIYSVCTTTYTGFGALIDEELSYKVKGQPGVLWVLPDSYIDVPNKDYGGDLFVDGKVI-H 180
KIYSV Y FGAL+ E+LS+K+K P V WVLPDSY+D NKDYGG+ F+DGK + +
Sbjct: 2 KIYSVSHKCYFAFGALVSEDLSHKIKELPKVKWVLPDSYLDGKNKDYGGEPFIDGKAVPY 61
Query: 181 RPQY 184
P+Y
Sbjct: 62 DPKY 65
Score = 38 (18.4 bits), Expect = 2.7e-18, Sum P(2) = 2.7e-18
Identities = 16/43 (37%), Positives = 18/43 (41%)
Query: 211 QNQSAPSQQPTSMSNQN------PAQAGGT--NFSINQGQNNQ 245
QN PS P +MS QN P GG N+ N G Q
Sbjct: 212 QNYRGPSLPPPNMS-QNYEGPPPPNMNGGWSGNYQQNGGYQQQ 253
>TAIR|locus:2088756 [details] [associations]
symbol:AT3G20930 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
[GO:0008150 "biological_process" evidence=ND] [GO:0000023 "maltose
metabolic process" evidence=RCA] [GO:0010027 "thylakoid membrane
organization" evidence=RCA] [GO:0019252 "starch biosynthetic
process" evidence=RCA] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 HSSP:Q9V535 eggNOG:COG0724 EMBL:AY099828
EMBL:AY084565 EMBL:BT002195 IPI:IPI00537313 RefSeq:NP_566672.1
UniGene:At.43817 ProteinModelPortal:Q8L440 SMR:Q8L440 PRIDE:Q8L440
EnsemblPlants:AT3G20930.1 GeneID:821642 KEGG:ath:AT3G20930
TAIR:At3g20930 InParanoid:Q8L440 OMA:KAQMVDH PhylomeDB:Q8L440
ProtClustDB:CLSN2688611 ArrayExpress:Q8L440 Genevestigator:Q8L440
Uniprot:Q8L440
Length = 374
Score = 151 (58.2 bits), Expect = 7.5e-09, P = 7.5e-09
Identities = 39/129 (30%), Positives = 66/129 (51%)
Query: 41 PICNPARFKTSGSSYSPLNDPSPNWSNRPPKETIMLDGCDYQHWLIVMEFPNPSELSEEE 100
P N F+ + S S L S S PP T++ +W+++++ P S+
Sbjct: 34 PNLNFGTFRKTSLSSSHLVFSSSAIS-APPSSTVLTRN---SYWMVLLDKPPHWVSSKSA 89
Query: 101 MINAYVKTLAAVVGSEEEAKKKIYSVCTTTYTGFGALIDEELSYKVKGQPGVLWVLPDSY 160
M++ YV+ LA V+G+E++A+ IY T+ GF IDE+ S ++ PGV+ + P+
Sbjct: 90 MVDYYVEILAKVLGNEKDAQVSIYDASFDTHFGFCCHIDEDASRQLASLPGVVSIRPEQD 149
Query: 161 IDVPNKDYG 169
K+YG
Sbjct: 150 YSSEKKNYG 158
Score = 149 (57.5 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 32/107 (29%), Positives = 61/107 (57%)
Query: 71 KETIMLDGCDYQHWLIVMEFPNPSELSEEEMINAYVKTLAAVVGSEEEAKKKIYSVCTTT 130
K + D +HW++ ++ P +++ +M++ V+ L+ V+ +E++A+ +Y V +
Sbjct: 163 KGVSLFDHGTVKHWMVRIDKPGVGIVTKAQMVDHCVQLLSKVLWNEKDAQMCLYHVSWQS 222
Query: 131 YTGFGALIDEELSYKVKGQPGVLWVLPDSYIDVPNKDYGGDLFVDGK 177
GF +DE + ++ G PGVL V+PD+ + NKDY GD D +
Sbjct: 223 DFGFCCDLDERSAVELAGVPGVLAVVPDNSFESLNKDYEGDSTQDSR 269
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.313 0.130 0.391 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 248 225 0.00077 113 3 11 23 0.47 33
32 0.41 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 12
No. of states in DFA: 604 (64 KB)
Total size of DFA: 196 KB (2111 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 22.31u 0.10s 22.41t Elapsed: 00:00:01
Total cpu time: 22.31u 0.10s 22.41t Elapsed: 00:00:01
Start: Sat May 11 03:15:38 2013 End: Sat May 11 03:15:39 2013